Vc3S01_A0765 c854553a05503eab64a7e62d4dcb0ca9 237 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_A0765 c854553a05503eab64a7e62d4dcb0ca9 237 Gene3D G3DSA:3.40.50.300 1 236 5.0E-72 T 12-10-2018 Vc3S01_A0765 c854553a05503eab64a7e62d4dcb0ca9 237 SMART SM00382 32 220 2.2E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_A0765 c854553a05503eab64a7e62d4dcb0ca9 237 SUPERFAMILY SSF52540 3 224 5.59E-72 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A0765 c854553a05503eab64a7e62d4dcb0ca9 237 Pfam PF00005 ABC transporter 24 172 2.0E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_A0503 a137f16e26edfccd37e08e91645e546b 382 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 283 4.5E-53 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Vc3S01_A0503 a137f16e26edfccd37e08e91645e546b 382 Gene3D G3DSA:3.50.50.60 108 242 9.9E-79 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_A0503 a137f16e26edfccd37e08e91645e546b 382 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 5.9E-13 T 12-10-2018 Vc3S01_A0503 a137f16e26edfccd37e08e91645e546b 382 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 145 170 5.9E-13 T 12-10-2018 Vc3S01_A0503 a137f16e26edfccd37e08e91645e546b 382 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 270 277 5.9E-13 T 12-10-2018 Vc3S01_A0503 a137f16e26edfccd37e08e91645e546b 382 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 231 245 5.9E-13 T 12-10-2018 Vc3S01_A0503 a137f16e26edfccd37e08e91645e546b 382 Gene3D G3DSA:3.50.50.60 6 278 9.9E-79 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_A0503 a137f16e26edfccd37e08e91645e546b 382 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 230 246 2.1E-22 T 12-10-2018 Vc3S01_A0503 a137f16e26edfccd37e08e91645e546b 382 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 145 163 2.1E-22 T 12-10-2018 Vc3S01_A0503 a137f16e26edfccd37e08e91645e546b 382 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 2.1E-22 T 12-10-2018 Vc3S01_A0503 a137f16e26edfccd37e08e91645e546b 382 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 255 277 2.1E-22 T 12-10-2018 Vc3S01_A0503 a137f16e26edfccd37e08e91645e546b 382 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 2.1E-22 T 12-10-2018 Vc3S01_A0503 a137f16e26edfccd37e08e91645e546b 382 Gene3D G3DSA:3.30.390.120 315 376 1.7E-8 T 12-10-2018 Vc3S01_A0503 a137f16e26edfccd37e08e91645e546b 382 SUPERFAMILY SSF51905 2 304 8.43E-37 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_0403 1a059a2320fffdb936eee875d648f48b 481 SUPERFAMILY SSF111283 18 480 3.4E-128 T 12-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 Vc3S01_0403 1a059a2320fffdb936eee875d648f48b 481 Pfam PF01523 Putative modulator of DNA gyrase 35 332 1.9E-64 T 12-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 Vc3S01_0403 1a059a2320fffdb936eee875d648f48b 481 PIRSF PIRSF004919 14 481 1.0E-142 T 12-10-2018 IPR025502 TldD Vc3S01_0403 1a059a2320fffdb936eee875d648f48b 481 Gene3D G3DSA:3.30.2290.10 8 240 7.9E-15 T 12-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal Vc3S01_2245 52a3cd05439c36ddde794fb04500d67b 225 Gene3D G3DSA:1.10.3720.10 1 218 2.5E-50 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_2245 52a3cd05439c36ddde794fb04500d67b 225 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 112 2.0E-23 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Vc3S01_2245 52a3cd05439c36ddde794fb04500d67b 225 SUPERFAMILY SSF161098 11 203 2.35E-41 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_2245 52a3cd05439c36ddde794fb04500d67b 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 48 217 2.7E-20 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Vc3S01_0977 271f69f450c721aaaa9cf4e7bf5daa4f 247 Pfam PF00106 short chain dehydrogenase 27 210 4.5E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_0977 271f69f450c721aaaa9cf4e7bf5daa4f 247 Gene3D G3DSA:3.40.50.720 21 240 8.3E-21 T 12-10-2018 Vc3S01_0977 271f69f450c721aaaa9cf4e7bf5daa4f 247 SUPERFAMILY SSF51735 9 212 9.28E-21 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_0887 5512b61de19ed234852dd8386cbb9c8b 161 Gene3D G3DSA:1.10.8.640 20 105 4.0E-36 T 12-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily Vc3S01_0887 5512b61de19ed234852dd8386cbb9c8b 161 Pfam PF03918 Cytochrome C biogenesis protein 9 152 6.3E-55 T 12-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family Vc3S01_3042 93c9977bbd1bb656590d9477f4c1a434 161 Gene3D G3DSA:1.10.287.180 1 76 5.1E-32 T 12-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 Vc3S01_3042 93c9977bbd1bb656590d9477f4c1a434 161 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 12-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 Vc3S01_3042 93c9977bbd1bb656590d9477f4c1a434 161 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 12-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 Vc3S01_3042 93c9977bbd1bb656590d9477f4c1a434 161 PIRSF PIRSF006092 1 158 1.5E-46 T 12-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 Vc3S01_3042 93c9977bbd1bb656590d9477f4c1a434 161 SUPERFAMILY SSF46557 3 78 7.32E-28 T 12-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 Vc3S01_3042 93c9977bbd1bb656590d9477f4c1a434 161 SUPERFAMILY SSF54534 80 157 3.14E-19 T 12-10-2018 Vc3S01_3042 93c9977bbd1bb656590d9477f4c1a434 161 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 3.5E-26 T 12-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 Vc3S01_3042 93c9977bbd1bb656590d9477f4c1a434 161 Gene3D G3DSA:3.10.50.30 77 158 2.7E-31 T 12-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 Vc3S01_3042 93c9977bbd1bb656590d9477f4c1a434 161 Hamap MF_00930 Transcription elongation factor GreB [greB]. 1 157 54.143 T 12-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 Vc3S01_3042 93c9977bbd1bb656590d9477f4c1a434 161 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 28.089 T 12-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 Vc3S01_3042 93c9977bbd1bb656590d9477f4c1a434 161 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 2 156 1.0E-76 T 12-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 Vc3S01_3042 93c9977bbd1bb656590d9477f4c1a434 161 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 156 2.6E-22 T 12-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 Vc3S01_A0906 b895e3027b7d5f7ead909276be269ba6 243 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 3 241 2.4E-83 T 12-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 Vc3S01_A0906 b895e3027b7d5f7ead909276be269ba6 243 SUPERFAMILY SSF53850 1 242 8.29E-70 T 12-10-2018 Vc3S01_A0906 b895e3027b7d5f7ead909276be269ba6 243 SMART SM00079 22 243 0.0016 T 12-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 Vc3S01_A0906 b895e3027b7d5f7ead909276be269ba6 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 23 243 7.9E-66 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Vc3S01_A0906 b895e3027b7d5f7ead909276be269ba6 243 Gene3D G3DSA:3.40.190.10 109 201 1.4E-77 T 12-10-2018 Vc3S01_A0906 b895e3027b7d5f7ead909276be269ba6 243 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 45 58 - T 12-10-2018 IPR018313 Solute-binding protein family 3, conserved site Vc3S01_A0906 b895e3027b7d5f7ead909276be269ba6 243 SMART SM00062 22 243 2.5E-74 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Vc3S01_A0906 b895e3027b7d5f7ead909276be269ba6 243 Gene3D G3DSA:3.40.190.10 26 240 1.4E-77 T 12-10-2018 Vc3S01_0724 8d68ac864cf0dc09bc05aa0bb7659bf2 1212 Gene3D G3DSA:1.10.3170.10 158 350 1.1E-159 T 12-10-2018 Vc3S01_0724 8d68ac864cf0dc09bc05aa0bb7659bf2 1212 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 11 1194 0.0 T 12-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 Vc3S01_0724 8d68ac864cf0dc09bc05aa0bb7659bf2 1212 Gene3D G3DSA:3.90.320.10 903 1201 1.1E-102 T 12-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal Vc3S01_0724 8d68ac864cf0dc09bc05aa0bb7659bf2 1212 Pfam PF13361 UvrD-like helicase C-terminal domain 524 827 1.5E-16 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Vc3S01_0724 8d68ac864cf0dc09bc05aa0bb7659bf2 1212 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 8 1195 22.856 T 12-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 Vc3S01_0724 8d68ac864cf0dc09bc05aa0bb7659bf2 1212 Gene3D G3DSA:3.40.50.300 446 858 1.4E-154 T 12-10-2018 Vc3S01_0724 8d68ac864cf0dc09bc05aa0bb7659bf2 1212 Pfam PF12705 PD-(D/E)XK nuclease superfamily 971 1179 9.0E-7 T 12-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type Vc3S01_0724 8d68ac864cf0dc09bc05aa0bb7659bf2 1212 SUPERFAMILY SSF52540 16 855 3.4E-110 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0724 8d68ac864cf0dc09bc05aa0bb7659bf2 1212 Pfam PF00580 UvrD/REP helicase N-terminal domain 17 437 5.2E-59 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 Vc3S01_0724 8d68ac864cf0dc09bc05aa0bb7659bf2 1212 Gene3D G3DSA:1.10.486.10 587 741 1.4E-154 T 12-10-2018 Vc3S01_0724 8d68ac864cf0dc09bc05aa0bb7659bf2 1212 SUPERFAMILY SSF52980 913 1196 2.2E-87 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Vc3S01_0724 8d68ac864cf0dc09bc05aa0bb7659bf2 1212 Gene3D G3DSA:3.40.50.300 10 437 1.1E-159 T 12-10-2018 Vc3S01_1566 c02b887aa81236fb84af8ca22b4fcc85 238 Gene3D G3DSA:1.10.510.10 22 236 1.8E-21 T 12-10-2018 Vc3S01_1566 c02b887aa81236fb84af8ca22b4fcc85 238 SMART SM00220 15 237 6.5E-5 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Vc3S01_1566 c02b887aa81236fb84af8ca22b4fcc85 238 SUPERFAMILY SSF56112 24 230 6.47E-24 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily Vc3S01_1566 c02b887aa81236fb84af8ca22b4fcc85 238 Pfam PF00069 Protein kinase domain 25 198 2.0E-15 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Vc3S01_0605 ec32d520af8ce7020fffa0c4ef748ed1 1128 Gene3D G3DSA:3.30.450.20 863 953 3.8E-8 T 12-10-2018 Vc3S01_0605 ec32d520af8ce7020fffa0c4ef748ed1 1128 PRINTS PR00344 Bacterial sensor protein C-terminal signature 668 681 2.1E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_0605 ec32d520af8ce7020fffa0c4ef748ed1 1128 PRINTS PR00344 Bacterial sensor protein C-terminal signature 644 662 2.1E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_0605 ec32d520af8ce7020fffa0c4ef748ed1 1128 PRINTS PR00344 Bacterial sensor protein C-terminal signature 609 623 2.1E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_0605 ec32d520af8ce7020fffa0c4ef748ed1 1128 PRINTS PR00344 Bacterial sensor protein C-terminal signature 627 637 2.1E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_0605 ec32d520af8ce7020fffa0c4ef748ed1 1128 Gene3D G3DSA:1.10.8.500 376 426 5.8E-16 T 12-10-2018 Vc3S01_0605 ec32d520af8ce7020fffa0c4ef748ed1 1128 Pfam PF00672 HAMP domain 379 427 1.2E-11 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Vc3S01_0605 ec32d520af8ce7020fffa0c4ef748ed1 1128 SUPERFAMILY SSF158472 378 429 1.27E-10 T 12-10-2018 Vc3S01_0605 ec32d520af8ce7020fffa0c4ef748ed1 1128 SMART SM00448 722 835 4.6E-44 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_0605 ec32d520af8ce7020fffa0c4ef748ed1 1128 Gene3D G3DSA:3.30.450.20 266 358 2.9E-9 T 12-10-2018 Vc3S01_0605 ec32d520af8ce7020fffa0c4ef748ed1 1128 Pfam PF00512 His Kinase A (phospho-acceptor) domain 460 525 2.2E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_0605 ec32d520af8ce7020fffa0c4ef748ed1 1128 SUPERFAMILY SSF55785 860 927 9.77E-9 T 12-10-2018 IPR035965 PAS domain superfamily Vc3S01_0605 ec32d520af8ce7020fffa0c4ef748ed1 1128 SMART SM00304 377 430 1.3E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Vc3S01_0605 ec32d520af8ce7020fffa0c4ef748ed1 1128 Pfam PF13188 PAS domain 879 918 1.4E-4 T 12-10-2018 IPR000014 PAS domain Vc3S01_0605 ec32d520af8ce7020fffa0c4ef748ed1 1128 Gene3D G3DSA:1.10.287.130 427 525 4.3E-22 T 12-10-2018 Vc3S01_0605 ec32d520af8ce7020fffa0c4ef748ed1 1128 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 574 683 1.3E-28 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_0605 ec32d520af8ce7020fffa0c4ef748ed1 1128 SMART SM00388 459 527 6.7E-18 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_0605 ec32d520af8ce7020fffa0c4ef748ed1 1128 Gene3D G3DSA:3.40.50.2300 723 862 7.7E-40 T 12-10-2018 Vc3S01_0605 ec32d520af8ce7020fffa0c4ef748ed1 1128 SUPERFAMILY SSF55874 516 686 3.27E-46 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_0605 ec32d520af8ce7020fffa0c4ef748ed1 1128 SUPERFAMILY SSF47384 446 527 1.96E-18 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Vc3S01_0605 ec32d520af8ce7020fffa0c4ef748ed1 1128 SMART SM00387 573 684 4.2E-39 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_0605 ec32d520af8ce7020fffa0c4ef748ed1 1128 SMART SM00091 873 938 9.2E-6 T 12-10-2018 IPR000014 PAS domain Vc3S01_0605 ec32d520af8ce7020fffa0c4ef748ed1 1128 Gene3D G3DSA:3.30.565.10 526 689 3.6E-45 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_0605 ec32d520af8ce7020fffa0c4ef748ed1 1128 SUPERFAMILY SSF52172 718 845 8.4E-41 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_0605 ec32d520af8ce7020fffa0c4ef748ed1 1128 Pfam PF00072 Response regulator receiver domain 726 836 1.6E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_1691 cc485d1cb0489d089204df8e028ca6dd 680 Gene3D G3DSA:3.30.565.10 521 673 6.0E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_1691 cc485d1cb0489d089204df8e028ca6dd 680 PRINTS PR00344 Bacterial sensor protein C-terminal signature 601 615 7.9E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_1691 cc485d1cb0489d089204df8e028ca6dd 680 PRINTS PR00344 Bacterial sensor protein C-terminal signature 654 667 7.9E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_1691 cc485d1cb0489d089204df8e028ca6dd 680 PRINTS PR00344 Bacterial sensor protein C-terminal signature 630 648 7.9E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_1691 cc485d1cb0489d089204df8e028ca6dd 680 PRINTS PR00344 Bacterial sensor protein C-terminal signature 619 629 7.9E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_1691 cc485d1cb0489d089204df8e028ca6dd 680 SMART SM00388 449 516 3.3E-9 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_1691 cc485d1cb0489d089204df8e028ca6dd 680 SUPERFAMILY SSF47384 444 513 1.53E-11 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Vc3S01_1691 cc485d1cb0489d089204df8e028ca6dd 680 Pfam PF17202 Single cache domain 3 205 319 3.0E-28 T 12-10-2018 IPR033463 Single cache domain 3 Vc3S01_1691 cc485d1cb0489d089204df8e028ca6dd 680 SMART SM00387 559 670 2.7E-26 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_1691 cc485d1cb0489d089204df8e028ca6dd 680 SUPERFAMILY SSF103190 166 311 4.71E-13 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Vc3S01_1691 cc485d1cb0489d089204df8e028ca6dd 680 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 563 668 2.5E-17 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_1691 cc485d1cb0489d089204df8e028ca6dd 680 Pfam PF00512 His Kinase A (phospho-acceptor) domain 449 514 1.9E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_1691 cc485d1cb0489d089204df8e028ca6dd 680 SUPERFAMILY SSF55874 506 668 1.03E-34 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_1691 cc485d1cb0489d089204df8e028ca6dd 680 Gene3D G3DSA:1.10.287.130 441 514 5.6E-22 T 12-10-2018 Vc3S01_2269 655aa474198f817a9938a261e3cdee5c 1153 SUPERFAMILY SSF52540 352 466 2.66E-27 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2269 655aa474198f817a9938a261e3cdee5c 1153 Gene3D G3DSA:3.40.50.11180 26 334 4.4E-122 T 12-10-2018 Vc3S01_2269 655aa474198f817a9938a261e3cdee5c 1153 Gene3D G3DSA:3.40.50.300 542 781 8.2E-237 T 12-10-2018 Vc3S01_2269 655aa474198f817a9938a261e3cdee5c 1153 Gene3D G3DSA:3.40.50.11140 355 453 7.7E-31 T 12-10-2018 Vc3S01_2269 655aa474198f817a9938a261e3cdee5c 1153 Pfam PF00270 DEAD/DEAH box helicase 605 765 1.5E-20 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Vc3S01_2269 655aa474198f817a9938a261e3cdee5c 1153 SMART SM00490 826 910 2.0E-18 T 12-10-2018 IPR001650 Helicase, C-terminal Vc3S01_2269 655aa474198f817a9938a261e3cdee5c 1153 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 38 1108 27.927 T 12-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 Vc3S01_2269 655aa474198f817a9938a261e3cdee5c 1153 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 148 1081 0.0 T 12-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 Vc3S01_2269 655aa474198f817a9938a261e3cdee5c 1153 SMART SM01058 479 576 8.6E-53 T 12-10-2018 IPR003711 CarD-like/TRCF domain Vc3S01_2269 655aa474198f817a9938a261e3cdee5c 1153 SMART SM00982 1008 1108 6.2E-44 T 12-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 Vc3S01_2269 655aa474198f817a9938a261e3cdee5c 1153 Gene3D G3DSA:2.30.30.840 483 541 8.2E-237 T 12-10-2018 Vc3S01_2269 655aa474198f817a9938a261e3cdee5c 1153 Gene3D G3DSA:3.30.2060.10 130 215 4.4E-122 T 12-10-2018 Vc3S01_2269 655aa474198f817a9938a261e3cdee5c 1153 SUPERFAMILY SSF52540 11 341 3.59E-100 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2269 655aa474198f817a9938a261e3cdee5c 1153 SUPERFAMILY SSF52540 523 783 5.48E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2269 655aa474198f817a9938a261e3cdee5c 1153 SUPERFAMILY SSF143517 995 1147 4.71E-42 T 12-10-2018 IPR037235 TRCF-like, C-terminal domain Vc3S01_2269 655aa474198f817a9938a261e3cdee5c 1153 Pfam PF00271 Helicase conserved C-terminal domain 807 909 3.0E-16 T 12-10-2018 IPR001650 Helicase, C-terminal Vc3S01_2269 655aa474198f817a9938a261e3cdee5c 1153 Gene3D G3DSA:3.90.1150.50 1004 1150 2.1E-43 T 12-10-2018 IPR037235 TRCF-like, C-terminal domain Vc3S01_2269 655aa474198f817a9938a261e3cdee5c 1153 SMART SM00487 600 790 2.6E-33 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Vc3S01_2269 655aa474198f817a9938a261e3cdee5c 1153 Pfam PF02559 CarD-like/TRCF domain 480 575 3.0E-26 T 12-10-2018 IPR003711 CarD-like/TRCF domain Vc3S01_2269 655aa474198f817a9938a261e3cdee5c 1153 Gene3D G3DSA:3.40.50.300 478 990 8.2E-237 T 12-10-2018 Vc3S01_2269 655aa474198f817a9938a261e3cdee5c 1153 Pfam PF03461 TRCF domain 1010 1101 2.4E-26 T 12-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 Vc3S01_2269 655aa474198f817a9938a261e3cdee5c 1153 SUPERFAMILY SSF52540 782 990 3.14E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2269 655aa474198f817a9938a261e3cdee5c 1153 SUPERFAMILY SSF141259 470 548 8.11E-25 T 12-10-2018 IPR036101 CarD-like/TRCF domain superfamily Vc3S01_2792 fabbb6ffde223580e2fd0bdc86608e6a 211 Gene3D G3DSA:3.40.30.10 11 202 2.5E-78 T 12-10-2018 Vc3S01_2792 fabbb6ffde223580e2fd0bdc86608e6a 211 Pfam PF00043 Glutathione S-transferase, C-terminal domain 117 194 1.4E-8 T 12-10-2018 IPR004046 Glutathione S-transferase, C-terminal Vc3S01_2792 fabbb6ffde223580e2fd0bdc86608e6a 211 SUPERFAMILY SSF52833 11 110 1.47E-21 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Vc3S01_2792 fabbb6ffde223580e2fd0bdc86608e6a 211 Gene3D G3DSA:1.20.1050.10 89 193 2.5E-78 T 12-10-2018 Vc3S01_2792 fabbb6ffde223580e2fd0bdc86608e6a 211 Pfam PF13417 Glutathione S-transferase, N-terminal domain 13 87 1.4E-16 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Vc3S01_2792 fabbb6ffde223580e2fd0bdc86608e6a 211 SUPERFAMILY SSF47616 82 208 3.13E-23 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Vc3S01_3091 8a3d88a7bc36e47841d3b871103627c6 254 Pfam PF01026 TatD related DNase 2 252 1.3E-63 T 12-10-2018 IPR001130 TatD family GO:0016788 Vc3S01_3091 8a3d88a7bc36e47841d3b871103627c6 254 PIRSF PIRSF005902 1 254 1.1E-70 T 12-10-2018 IPR001130 TatD family GO:0016788 Vc3S01_3091 8a3d88a7bc36e47841d3b871103627c6 254 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 1 252 1.4E-69 T 12-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 Vc3S01_3091 8a3d88a7bc36e47841d3b871103627c6 254 SUPERFAMILY SSF51556 1 253 2.61E-80 T 12-10-2018 IPR032466 Metal-dependent hydrolase Vc3S01_3091 8a3d88a7bc36e47841d3b871103627c6 254 Gene3D G3DSA:3.20.20.140 1 253 1.4E-79 T 12-10-2018 Vc3S01_A0351 38c5a9fa1f5834d5cd120b0528a3bc17 242 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 26 239 1.5E-24 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Vc3S01_A0351 38c5a9fa1f5834d5cd120b0528a3bc17 242 Gene3D G3DSA:1.20.140.160 99 242 3.1E-31 T 12-10-2018 Vc3S01_A0351 38c5a9fa1f5834d5cd120b0528a3bc17 242 Pfam PF04542 Sigma-70 region 2 28 101 1.2E-9 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Vc3S01_A0351 38c5a9fa1f5834d5cd120b0528a3bc17 242 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 210 236 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Vc3S01_A0351 38c5a9fa1f5834d5cd120b0528a3bc17 242 Pfam PF04545 Sigma-70, region 4 189 236 1.2E-8 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Vc3S01_A0351 38c5a9fa1f5834d5cd120b0528a3bc17 242 SUPERFAMILY SSF88659 161 240 1.2E-14 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Vc3S01_A0351 38c5a9fa1f5834d5cd120b0528a3bc17 242 SUPERFAMILY SSF88659 102 173 2.29E-12 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Vc3S01_A0351 38c5a9fa1f5834d5cd120b0528a3bc17 242 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 28 240 4.2E-74 T 12-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 Vc3S01_A0351 38c5a9fa1f5834d5cd120b0528a3bc17 242 Gene3D G3DSA:1.10.1740.10 13 98 2.9E-17 T 12-10-2018 Vc3S01_A0351 38c5a9fa1f5834d5cd120b0528a3bc17 242 SUPERFAMILY SSF88946 22 100 7.06E-16 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Vc3S01_A2001 0d426bc7b065519a9f779b16582e6aa2 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 3.0E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A2001 0d426bc7b065519a9f779b16582e6aa2 296 Gene3D G3DSA:1.10.10.10 3 89 5.0E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A2001 0d426bc7b065519a9f779b16582e6aa2 296 Pfam PF03466 LysR substrate binding domain 89 292 2.4E-50 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_A2001 0d426bc7b065519a9f779b16582e6aa2 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.7E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A2001 0d426bc7b065519a9f779b16582e6aa2 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.7E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A2001 0d426bc7b065519a9f779b16582e6aa2 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.7E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A2001 0d426bc7b065519a9f779b16582e6aa2 296 Gene3D G3DSA:3.40.190.10 163 263 1.2E-73 T 12-10-2018 Vc3S01_A2001 0d426bc7b065519a9f779b16582e6aa2 296 SUPERFAMILY SSF46785 4 112 1.14E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A2001 0d426bc7b065519a9f779b16582e6aa2 296 SUPERFAMILY SSF53850 90 293 1.07E-51 T 12-10-2018 Vc3S01_A2001 0d426bc7b065519a9f779b16582e6aa2 296 Gene3D G3DSA:3.40.190.10 91 290 1.2E-73 T 12-10-2018 Vc3S01_0487 a19ec1e00f63a216352ee4dbcf59338e 386 PRINTS PR00477 Phosphoglycerate kinase family signature 303 328 3.3E-82 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_0487 a19ec1e00f63a216352ee4dbcf59338e 386 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 3.3E-82 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_0487 a19ec1e00f63a216352ee4dbcf59338e 386 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 3.3E-82 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_0487 a19ec1e00f63a216352ee4dbcf59338e 386 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 3.3E-82 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_0487 a19ec1e00f63a216352ee4dbcf59338e 386 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 3.3E-82 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_0487 a19ec1e00f63a216352ee4dbcf59338e 386 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 3.3E-82 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_0487 a19ec1e00f63a216352ee4dbcf59338e 386 PRINTS PR00477 Phosphoglycerate kinase family signature 336 347 3.3E-82 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_0487 a19ec1e00f63a216352ee4dbcf59338e 386 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 3.3E-82 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_0487 a19ec1e00f63a216352ee4dbcf59338e 386 PRINTS PR00477 Phosphoglycerate kinase family signature 359 376 3.3E-82 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_0487 a19ec1e00f63a216352ee4dbcf59338e 386 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 383 38.078 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_0487 a19ec1e00f63a216352ee4dbcf59338e 386 PIRSF PIRSF000724 1 386 3.3E-134 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_0487 a19ec1e00f63a216352ee4dbcf59338e 386 SUPERFAMILY SSF53748 3 382 1.88E-143 T 12-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_0487 a19ec1e00f63a216352ee4dbcf59338e 386 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 12-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_0487 a19ec1e00f63a216352ee4dbcf59338e 386 Pfam PF00162 Phosphoglycerate kinase 6 373 3.2E-138 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_0487 a19ec1e00f63a216352ee4dbcf59338e 386 Gene3D G3DSA:3.40.50.1260 165 373 2.3E-150 T 12-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_0487 a19ec1e00f63a216352ee4dbcf59338e 386 Gene3D G3DSA:3.40.50.1260 10 379 2.3E-150 T 12-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_2903 8f5f0a8e9bf3dac404aeda70619eaa05 205 Pfam PF01583 Adenylylsulphate kinase 31 185 3.9E-70 T 12-10-2018 Vc3S01_2903 8f5f0a8e9bf3dac404aeda70619eaa05 205 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 14 193 2.5E-80 T 12-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 Vc3S01_2903 8f5f0a8e9bf3dac404aeda70619eaa05 205 Gene3D G3DSA:3.40.50.300 9 205 4.1E-77 T 12-10-2018 Vc3S01_2903 8f5f0a8e9bf3dac404aeda70619eaa05 205 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 30 202 38.256 T 12-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 Vc3S01_2903 8f5f0a8e9bf3dac404aeda70619eaa05 205 SUPERFAMILY SSF52540 25 195 1.18E-36 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0308 5809a6619d04fbb03409f3b25814c3bc 404 TIGRFAM TIGR00032 argG: argininosuccinate synthase 8 395 6.5E-136 T 12-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Vc3S01_0308 5809a6619d04fbb03409f3b25814c3bc 404 Gene3D G3DSA:1.20.5.470 368 403 1.8E-8 T 12-10-2018 Vc3S01_0308 5809a6619d04fbb03409f3b25814c3bc 404 SUPERFAMILY SSF69864 177 402 3.4E-87 T 12-10-2018 Vc3S01_0308 5809a6619d04fbb03409f3b25814c3bc 404 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 121 132 - T 12-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Vc3S01_0308 5809a6619d04fbb03409f3b25814c3bc 404 Gene3D G3DSA:3.40.50.620 9 177 9.9E-145 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Vc3S01_0308 5809a6619d04fbb03409f3b25814c3bc 404 Pfam PF00764 Arginosuccinate synthase 10 396 6.4E-146 T 12-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Vc3S01_0308 5809a6619d04fbb03409f3b25814c3bc 404 SUPERFAMILY SSF52402 7 170 1.12E-47 T 12-10-2018 Vc3S01_0308 5809a6619d04fbb03409f3b25814c3bc 404 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 12 20 - T 12-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Vc3S01_0308 5809a6619d04fbb03409f3b25814c3bc 404 Hamap MF_00005 Argininosuccinate synthase [argG]. 6 402 51.639 T 12-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Vc3S01_0308 5809a6619d04fbb03409f3b25814c3bc 404 Gene3D G3DSA:3.90.1260.10 68 356 9.9E-145 T 12-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Vc3S01_2840 47c65fd5f45bf35a5ed014044071c1b4 464 Pfam PF00512 His Kinase A (phospho-acceptor) domain 231 295 4.8E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_2840 47c65fd5f45bf35a5ed014044071c1b4 464 SMART SM00388 230 296 1.3E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_2840 47c65fd5f45bf35a5ed014044071c1b4 464 Gene3D G3DSA:3.30.565.10 305 457 3.5E-31 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_2840 47c65fd5f45bf35a5ed014044071c1b4 464 Gene3D G3DSA:1.10.287.130 180 297 1.4E-20 T 12-10-2018 Vc3S01_2840 47c65fd5f45bf35a5ed014044071c1b4 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 390 4.1E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_2840 47c65fd5f45bf35a5ed014044071c1b4 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 430 4.1E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_2840 47c65fd5f45bf35a5ed014044071c1b4 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 394 404 4.1E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_2840 47c65fd5f45bf35a5ed014044071c1b4 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 435 448 4.1E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_2840 47c65fd5f45bf35a5ed014044071c1b4 464 SUPERFAMILY SSF47384 213 295 4.9E-16 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Vc3S01_2840 47c65fd5f45bf35a5ed014044071c1b4 464 SMART SM00387 339 451 1.4E-27 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_2840 47c65fd5f45bf35a5ed014044071c1b4 464 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 8 448 5.9E-119 T 12-10-2018 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 Vc3S01_2840 47c65fd5f45bf35a5ed014044071c1b4 464 SMART SM00304 176 229 3.7E-5 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Vc3S01_2840 47c65fd5f45bf35a5ed014044071c1b4 464 SUPERFAMILY SSF55874 285 451 1.15E-34 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_2840 47c65fd5f45bf35a5ed014044071c1b4 464 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 341 449 1.3E-18 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_2927 16a42f74d2ddae42afe18223eebcded5 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 8.1E-75 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Vc3S01_2927 16a42f74d2ddae42afe18223eebcded5 177 Pfam PF00347 Ribosomal protein L6 11 82 5.6E-20 T 12-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_2927 16a42f74d2ddae42afe18223eebcded5 177 Pfam PF00347 Ribosomal protein L6 91 164 1.4E-18 T 12-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_2927 16a42f74d2ddae42afe18223eebcded5 177 Gene3D G3DSA:3.90.930.12 1 82 6.2E-31 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_2927 16a42f74d2ddae42afe18223eebcded5 177 Gene3D G3DSA:3.90.930.12 83 177 2.5E-39 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_2927 16a42f74d2ddae42afe18223eebcded5 177 SUPERFAMILY SSF56053 83 177 1.87E-35 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_2927 16a42f74d2ddae42afe18223eebcded5 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 12-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_2927 16a42f74d2ddae42afe18223eebcded5 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 1.4E-33 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Vc3S01_2927 16a42f74d2ddae42afe18223eebcded5 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 1.4E-33 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Vc3S01_2927 16a42f74d2ddae42afe18223eebcded5 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 1.4E-33 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Vc3S01_2927 16a42f74d2ddae42afe18223eebcded5 177 SUPERFAMILY SSF56053 1 82 9.05E-25 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_2927 16a42f74d2ddae42afe18223eebcded5 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.678 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Vc3S01_2927 16a42f74d2ddae42afe18223eebcded5 177 PIRSF PIRSF002162 1 177 2.7E-46 T 12-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_0710 6475f25561bfa79745b9323684c62dea 505 SUPERFAMILY SSF53067 5 256 5.87E-94 T 12-10-2018 Vc3S01_0710 6475f25561bfa79745b9323684c62dea 505 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 136 148 - T 12-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Vc3S01_0710 6475f25561bfa79745b9323684c62dea 505 PIRSF PIRSF000538 4 503 1.2E-176 T 12-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Vc3S01_0710 6475f25561bfa79745b9323684c62dea 505 Hamap MF_00186 Glycerol kinase [glpK]. 4 498 58.136 T 12-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 Vc3S01_0710 6475f25561bfa79745b9323684c62dea 505 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 5 497 7.5E-225 T 12-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 Vc3S01_0710 6475f25561bfa79745b9323684c62dea 505 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 363 383 - T 12-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Vc3S01_0710 6475f25561bfa79745b9323684c62dea 505 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 253 4.7E-86 T 12-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 Vc3S01_0710 6475f25561bfa79745b9323684c62dea 505 SUPERFAMILY SSF53067 255 497 9.77E-85 T 12-10-2018 Vc3S01_0710 6475f25561bfa79745b9323684c62dea 505 Gene3D G3DSA:3.30.420.40 2 254 1.4E-112 T 12-10-2018 Vc3S01_0710 6475f25561bfa79745b9323684c62dea 505 Gene3D G3DSA:3.30.420.40 255 501 1.7E-92 T 12-10-2018 Vc3S01_0710 6475f25561bfa79745b9323684c62dea 505 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 262 451 1.0E-59 T 12-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 Vc3S01_0387 4fc60657ad27ef628e02a53329befc41 407 Gene3D G3DSA:1.20.81.30 62 176 9.5E-31 T 12-10-2018 Vc3S01_0387 4fc60657ad27ef628e02a53329befc41 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 3.9E-9 T 12-10-2018 IPR003004 GspF/PilC family Vc3S01_0387 4fc60657ad27ef628e02a53329befc41 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 385 404 3.9E-9 T 12-10-2018 IPR003004 GspF/PilC family Vc3S01_0387 4fc60657ad27ef628e02a53329befc41 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 369 383 3.9E-9 T 12-10-2018 IPR003004 GspF/PilC family Vc3S01_0387 4fc60657ad27ef628e02a53329befc41 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 166 194 3.9E-9 T 12-10-2018 IPR003004 GspF/PilC family Vc3S01_0387 4fc60657ad27ef628e02a53329befc41 407 Gene3D G3DSA:1.20.81.30 257 370 1.7E-28 T 12-10-2018 Vc3S01_0387 4fc60657ad27ef628e02a53329befc41 407 Pfam PF00482 Type II secretion system (T2SS), protein F 71 194 4.5E-30 T 12-10-2018 IPR018076 Type II secretion system F domain Vc3S01_0387 4fc60657ad27ef628e02a53329befc41 407 Pfam PF00482 Type II secretion system (T2SS), protein F 274 396 1.1E-26 T 12-10-2018 IPR018076 Type II secretion system F domain Vc3S01_1203 34a97060acfe466ddbb8464db5a8924c 521 PIRSF PIRSF001373 3 521 3.0E-260 T 12-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Vc3S01_1203 34a97060acfe466ddbb8464db5a8924c 521 Pfam PF04715 Anthranilate synthase component I, N terminal region 24 197 3.3E-14 T 12-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Vc3S01_1203 34a97060acfe466ddbb8464db5a8924c 521 PRINTS PR00095 Anthranilate synthase component I signature 448 462 1.3E-22 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Vc3S01_1203 34a97060acfe466ddbb8464db5a8924c 521 PRINTS PR00095 Anthranilate synthase component I signature 354 367 1.3E-22 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Vc3S01_1203 34a97060acfe466ddbb8464db5a8924c 521 PRINTS PR00095 Anthranilate synthase component I signature 463 477 1.3E-22 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Vc3S01_1203 34a97060acfe466ddbb8464db5a8924c 521 PRINTS PR00095 Anthranilate synthase component I signature 368 381 1.3E-22 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Vc3S01_1203 34a97060acfe466ddbb8464db5a8924c 521 Gene3D G3DSA:3.60.120.10 7 521 5.6E-186 T 12-10-2018 IPR005801 ADC synthase GO:0009058 Vc3S01_1203 34a97060acfe466ddbb8464db5a8924c 521 Pfam PF00425 chorismate binding enzyme 246 506 2.4E-84 T 12-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal Vc3S01_1203 34a97060acfe466ddbb8464db5a8924c 521 SUPERFAMILY SSF56322 13 518 8.63E-158 T 12-10-2018 IPR005801 ADC synthase GO:0009058 Vc3S01_1203 34a97060acfe466ddbb8464db5a8924c 521 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 22 518 2.1E-227 T 12-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Vc3S01_0486 f72f9c5b43f6f75980790b52eed57b53 345 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 164 320 1.2E-55 T 12-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_0486 f72f9c5b43f6f75980790b52eed57b53 345 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 109 4.2E-32 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_0486 f72f9c5b43f6f75980790b52eed57b53 345 PIRSF PIRSF000149 1 342 5.2E-128 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_0486 f72f9c5b43f6f75980790b52eed57b53 345 SUPERFAMILY SSF51735 2 183 4.77E-50 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_0486 f72f9c5b43f6f75980790b52eed57b53 345 SMART SM00846 2 159 3.2E-72 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_0486 f72f9c5b43f6f75980790b52eed57b53 345 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 3 332 1.2E-190 T 12-10-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 Vc3S01_0486 f72f9c5b43f6f75980790b52eed57b53 345 SUPERFAMILY SSF55347 159 321 8.93E-59 T 12-10-2018 Vc3S01_0486 f72f9c5b43f6f75980790b52eed57b53 345 Gene3D G3DSA:3.30.360.10 158 322 1.9E-128 T 12-10-2018 Vc3S01_0486 f72f9c5b43f6f75980790b52eed57b53 345 Hamap MF_01640 D-erythrose-4-phosphate dehydrogenase [epd]. 1 341 65.923 T 12-10-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 Vc3S01_0486 f72f9c5b43f6f75980790b52eed57b53 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 276 291 2.6E-29 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_0486 f72f9c5b43f6f75980790b52eed57b53 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 153 171 2.6E-29 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_0486 f72f9c5b43f6f75980790b52eed57b53 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 236 253 2.6E-29 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_0486 f72f9c5b43f6f75980790b52eed57b53 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 116 129 2.6E-29 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_0486 f72f9c5b43f6f75980790b52eed57b53 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 180 196 2.6E-29 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_0486 f72f9c5b43f6f75980790b52eed57b53 345 Gene3D G3DSA:3.40.50.720 3 332 1.9E-128 T 12-10-2018 Vc3S01_A1931 dec13926a9bb73190f6f22103334c38a 388 Gene3D G3DSA:3.20.20.120 98 351 6.2E-171 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Vc3S01_A1931 dec13926a9bb73190f6f22103334c38a 388 SUPERFAMILY SSF51604 91 369 5.5E-67 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Vc3S01_A1931 dec13926a9bb73190f6f22103334c38a 388 SUPERFAMILY SSF54826 6 105 2.36E-28 T 12-10-2018 Vc3S01_A1931 dec13926a9bb73190f6f22103334c38a 388 Gene3D G3DSA:3.30.390.10 2 385 6.2E-171 T 12-10-2018 IPR029017 Enolase-like, N-terminal Vc3S01_A1931 dec13926a9bb73190f6f22103334c38a 388 Pfam PF13378 Enolase C-terminal domain-like 126 362 5.3E-38 T 12-10-2018 IPR029065 Enolase C-terminal domain-like Vc3S01_A1931 dec13926a9bb73190f6f22103334c38a 388 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 78 103 - T 12-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 Vc3S01_A1931 dec13926a9bb73190f6f22103334c38a 388 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 7 103 1.5E-23 T 12-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain Vc3S01_A1931 dec13926a9bb73190f6f22103334c38a 388 SMART SM00922 121 241 1.1E-7 T 12-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal Vc3S01_1718 77df729290d05082f152f73e2766738d 280 SUPERFAMILY SSF56091 21 198 1.15E-40 T 12-10-2018 Vc3S01_1718 77df729290d05082f152f73e2766738d 280 ProSitePatterns PS00333 ATP-dependent DNA ligase signature 2. 175 198 - T 12-10-2018 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 Vc3S01_1718 77df729290d05082f152f73e2766738d 280 SUPERFAMILY SSF50249 173 277 1.48E-30 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Vc3S01_1718 77df729290d05082f152f73e2766738d 280 Gene3D G3DSA:3.30.1490.70 31 190 2.2E-55 T 12-10-2018 Vc3S01_1718 77df729290d05082f152f73e2766738d 280 Pfam PF14743 DNA ligase OB-like domain 212 277 1.2E-25 T 12-10-2018 IPR029319 DNA ligase, OB-like domain Vc3S01_1718 77df729290d05082f152f73e2766738d 280 Gene3D G3DSA:3.30.470.30 51 151 2.2E-55 T 12-10-2018 Vc3S01_1718 77df729290d05082f152f73e2766738d 280 Gene3D G3DSA:2.40.50.140 213 280 8.5E-8 T 12-10-2018 Vc3S01_1718 77df729290d05082f152f73e2766738d 280 Pfam PF01068 ATP dependent DNA ligase domain 43 198 3.9E-8 T 12-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 Vc3S01_2251 d875ca6ecba176cdef7259dc56752632 758 SUPERFAMILY SSF51998 4 757 2.52E-285 T 12-10-2018 Vc3S01_2251 d875ca6ecba176cdef7259dc56752632 758 Pfam PF01228 Glycine radical 628 739 2.6E-43 T 12-10-2018 IPR001150 Glycine radical domain GO:0003824 Vc3S01_2251 d875ca6ecba176cdef7259dc56752632 758 Pfam PF02901 Pyruvate formate lyase-like 21 612 3.7E-202 T 12-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 Vc3S01_2251 d875ca6ecba176cdef7259dc56752632 758 PIRSF PIRSF000379 5 758 0.0 T 12-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 Vc3S01_2251 d875ca6ecba176cdef7259dc56752632 758 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 8 758 0.0 T 12-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 Vc3S01_2251 d875ca6ecba176cdef7259dc56752632 758 Gene3D G3DSA:3.20.70.20 1 758 0.0 T 12-10-2018 Vc3S01_2251 d875ca6ecba176cdef7259dc56752632 758 ProSitePatterns PS00850 Glycine radical domain signature. 728 736 - T 12-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site Vc3S01_1226 edef1da40f1f6db774850486b1b635a7 235 SUPERFAMILY SSF53335 15 229 4.8E-45 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Vc3S01_1226 edef1da40f1f6db774850486b1b635a7 235 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 11 229 2.0E-87 T 12-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 Vc3S01_1226 edef1da40f1f6db774850486b1b635a7 235 Gene3D G3DSA:3.40.50.150 11 234 2.8E-76 T 12-10-2018 Vc3S01_1226 edef1da40f1f6db774850486b1b635a7 235 Pfam PF13489 Methyltransferase domain 52 201 9.6E-26 T 12-10-2018 Vc3S01_1226 edef1da40f1f6db774850486b1b635a7 235 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 11 235 37.395 T 12-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 Vc3S01_0738 b2ed77bcdb6ea5ecc4caa55261c4ce4e 198 SMART SM00464 3 186 0.0016 T 12-10-2018 IPR003111 Lon, substrate-binding domain Vc3S01_0738 b2ed77bcdb6ea5ecc4caa55261c4ce4e 198 SUPERFAMILY SSF88697 3 189 3.48E-46 T 12-10-2018 IPR015947 PUA-like superfamily Vc3S01_0738 b2ed77bcdb6ea5ecc4caa55261c4ce4e 198 Gene3D G3DSA:2.30.130.40 1 111 1.0E-29 T 12-10-2018 Vc3S01_0738 b2ed77bcdb6ea5ecc4caa55261c4ce4e 198 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 3 128 2.8E-14 T 12-10-2018 IPR003111 Lon, substrate-binding domain Vc3S01_A0270 a89377822ad63fbe75373e0c2d0807ec 380 Gene3D G3DSA:3.30.1060.10 26 210 8.2E-62 T 12-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Vc3S01_A0270 a89377822ad63fbe75373e0c2d0807ec 380 Pfam PF01641 SelR domain 243 362 1.1E-45 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 Vc3S01_A0270 a89377822ad63fbe75373e0c2d0807ec 380 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 238 371 2.6E-57 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 Vc3S01_A0270 a89377822ad63fbe75373e0c2d0807ec 380 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 237 363 35.033 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 Vc3S01_A0270 a89377822ad63fbe75373e0c2d0807ec 380 SUPERFAMILY SSF51316 239 379 1.31E-58 T 12-10-2018 IPR011057 Mss4-like superfamily Vc3S01_A0270 a89377822ad63fbe75373e0c2d0807ec 380 SUPERFAMILY SSF55068 30 205 3.01E-70 T 12-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Vc3S01_A0270 a89377822ad63fbe75373e0c2d0807ec 380 Pfam PF01625 Peptide methionine sulfoxide reductase 43 193 2.5E-56 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Vc3S01_A0270 a89377822ad63fbe75373e0c2d0807ec 380 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 42 192 4.3E-50 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Vc3S01_A0270 a89377822ad63fbe75373e0c2d0807ec 380 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 40 199 35.621 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Vc3S01_A0270 a89377822ad63fbe75373e0c2d0807ec 380 Gene3D G3DSA:2.170.150.20 233 380 2.1E-55 T 12-10-2018 Vc3S01_2920 e8b2fa34d117e41896678b4dde01c2be 118 Gene3D G3DSA:4.10.910.10 72 118 1.3E-26 T 12-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_2920 e8b2fa34d117e41896678b4dde01c2be 118 SUPERFAMILY SSF46946 2 114 4.42E-45 T 12-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 Vc3S01_2920 e8b2fa34d117e41896678b4dde01c2be 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 1.7E-53 T 12-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_2920 e8b2fa34d117e41896678b4dde01c2be 118 PIRSF PIRSF002134 1 118 4.1E-41 T 12-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_2920 e8b2fa34d117e41896678b4dde01c2be 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 3.4E-32 T 12-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_2920 e8b2fa34d117e41896678b4dde01c2be 118 Gene3D G3DSA:1.10.8.50 1 71 5.4E-28 T 12-10-2018 Vc3S01_2920 e8b2fa34d117e41896678b4dde01c2be 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 12-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_2920 e8b2fa34d117e41896678b4dde01c2be 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 27.075 T 12-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_0217 53d0a2d25091c91123bf9ed8a21f682b 320 PIRSF PIRSF000532 1 320 4.1E-128 T 12-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 Vc3S01_0217 53d0a2d25091c91123bf9ed8a21f682b 320 Gene3D G3DSA:3.40.50.450 4 287 8.1E-118 T 12-10-2018 Vc3S01_0217 53d0a2d25091c91123bf9ed8a21f682b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 213 225 3.8E-83 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Vc3S01_0217 53d0a2d25091c91123bf9ed8a21f682b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 177 194 3.8E-83 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Vc3S01_0217 53d0a2d25091c91123bf9ed8a21f682b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 121 138 3.8E-83 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Vc3S01_0217 53d0a2d25091c91123bf9ed8a21f682b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 159 175 3.8E-83 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Vc3S01_0217 53d0a2d25091c91123bf9ed8a21f682b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 94 110 3.8E-83 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Vc3S01_0217 53d0a2d25091c91123bf9ed8a21f682b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 139 157 3.8E-83 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Vc3S01_0217 53d0a2d25091c91123bf9ed8a21f682b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 32 45 3.8E-83 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Vc3S01_0217 53d0a2d25091c91123bf9ed8a21f682b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 7 26 3.8E-83 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Vc3S01_0217 53d0a2d25091c91123bf9ed8a21f682b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 240 262 3.8E-83 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Vc3S01_0217 53d0a2d25091c91123bf9ed8a21f682b 320 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 4 301 3.7E-131 T 12-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 Vc3S01_0217 53d0a2d25091c91123bf9ed8a21f682b 320 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 2 320 47.603 T 12-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 Vc3S01_0217 53d0a2d25091c91123bf9ed8a21f682b 320 ProSitePatterns PS00433 Phosphofructokinase signature. 244 262 - T 12-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Vc3S01_0217 53d0a2d25091c91123bf9ed8a21f682b 320 Pfam PF00365 Phosphofructokinase 4 276 2.3E-110 T 12-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Vc3S01_0217 53d0a2d25091c91123bf9ed8a21f682b 320 SUPERFAMILY SSF53784 3 310 8.24E-114 T 12-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Vc3S01_0217 53d0a2d25091c91123bf9ed8a21f682b 320 Gene3D G3DSA:3.40.50.460 143 252 8.1E-118 T 12-10-2018 Vc3S01_A0412 301425581e456e226d74edfb5e62a837 348 Pfam PF00107 Zinc-binding dehydrogenase 177 291 3.1E-23 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Vc3S01_A0412 301425581e456e226d74edfb5e62a837 348 Gene3D G3DSA:3.40.50.720 154 289 2.9E-96 T 12-10-2018 Vc3S01_A0412 301425581e456e226d74edfb5e62a837 348 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 128 2.1E-28 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Vc3S01_A0412 301425581e456e226d74edfb5e62a837 348 SUPERFAMILY SSF51735 140 305 5.58E-38 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_A0412 301425581e456e226d74edfb5e62a837 348 SUPERFAMILY SSF50129 1 155 5.63E-50 T 12-10-2018 IPR011032 GroES-like superfamily Vc3S01_A0412 301425581e456e226d74edfb5e62a837 348 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 12-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 Vc3S01_A0412 301425581e456e226d74edfb5e62a837 348 SMART SM00829 8 343 2.2E-4 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Vc3S01_A0412 301425581e456e226d74edfb5e62a837 348 Gene3D G3DSA:3.90.180.10 15 330 2.9E-96 T 12-10-2018 Vc3S01_1605 20e75faeea4056a856f72b76f7d0778b 4566 SMART SM00112 3539 3616 1.4E-10 T 12-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 Vc3S01_1605 20e75faeea4056a856f72b76f7d0778b 4566 Gene3D G3DSA:2.60.40.10 2273 2366 5.4E-6 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_1605 20e75faeea4056a856f72b76f7d0778b 4566 Gene3D G3DSA:2.60.40.10 1901 1994 5.4E-6 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_1605 20e75faeea4056a856f72b76f7d0778b 4566 Gene3D G3DSA:2.60.40.10 1529 1622 5.4E-6 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_1605 20e75faeea4056a856f72b76f7d0778b 4566 Gene3D G3DSA:2.60.40.10 2459 2552 5.4E-6 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_1605 20e75faeea4056a856f72b76f7d0778b 4566 Gene3D G3DSA:2.60.40.10 2645 2738 2.0E-5 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_1605 20e75faeea4056a856f72b76f7d0778b 4566 Gene3D G3DSA:2.60.40.10 1715 1809 1.8E-5 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_1605 20e75faeea4056a856f72b76f7d0778b 4566 Gene3D G3DSA:2.60.40.10 2087 2180 5.4E-6 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_1605 20e75faeea4056a856f72b76f7d0778b 4566 Gene3D G3DSA:2.60.40.10 1343 1437 2.1E-5 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_1605 20e75faeea4056a856f72b76f7d0778b 4566 SUPERFAMILY SSF141072 3389 3498 4.84E-16 T 12-10-2018 IPR038081 CalX-like domain superfamily Vc3S01_1605 20e75faeea4056a856f72b76f7d0778b 4566 Gene3D G3DSA:2.150.10.10 4410 4540 3.2E-18 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal Vc3S01_1605 20e75faeea4056a856f72b76f7d0778b 4566 SUPERFAMILY SSF51120 4344 4521 3.14E-16 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal Vc3S01_1605 20e75faeea4056a856f72b76f7d0778b 4566 Gene3D G3DSA:3.40.50.410 4073 4227 5.9E-15 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Vc3S01_1605 20e75faeea4056a856f72b76f7d0778b 4566 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 4425 4443 - T 12-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site Vc3S01_1605 20e75faeea4056a856f72b76f7d0778b 4566 Gene3D G3DSA:2.60.40.2030 3380 3509 1.1E-6 T 12-10-2018 IPR038081 CalX-like domain superfamily Vc3S01_1605 20e75faeea4056a856f72b76f7d0778b 4566 SUPERFAMILY SSF141072 3269 3379 3.01E-8 T 12-10-2018 IPR038081 CalX-like domain superfamily Vc3S01_1605 20e75faeea4056a856f72b76f7d0778b 4566 Pfam PF00028 Cadherin domain 3525 3607 1.6E-9 T 12-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 Vc3S01_1605 20e75faeea4056a856f72b76f7d0778b 4566 SMART SM00736 2091 2186 0.069 T 12-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 Vc3S01_1605 20e75faeea4056a856f72b76f7d0778b 4566 SMART SM00736 2649 2744 0.094 T 12-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 Vc3S01_1605 20e75faeea4056a856f72b76f7d0778b 4566 SMART SM00736 1347 1442 0.09 T 12-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 Vc3S01_1605 20e75faeea4056a856f72b76f7d0778b 4566 SMART SM00736 1719 1814 0.14 T 12-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 Vc3S01_1605 20e75faeea4056a856f72b76f7d0778b 4566 SMART SM00736 2277 2372 0.069 T 12-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 Vc3S01_1605 20e75faeea4056a856f72b76f7d0778b 4566 SMART SM00736 1905 2000 0.069 T 12-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 Vc3S01_1605 20e75faeea4056a856f72b76f7d0778b 4566 SMART SM00736 1533 1628 0.069 T 12-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 Vc3S01_1605 20e75faeea4056a856f72b76f7d0778b 4566 SMART SM00736 2463 2558 0.069 T 12-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 Vc3S01_1605 20e75faeea4056a856f72b76f7d0778b 4566 Gene3D G3DSA:2.60.40.60 3515 3613 2.3E-14 T 12-10-2018 Vc3S01_1605 20e75faeea4056a856f72b76f7d0778b 4566 PRINTS PR00313 NodO calcium binding signature 4420 4428 6.7E-5 T 12-10-2018 Vc3S01_1605 20e75faeea4056a856f72b76f7d0778b 4566 PRINTS PR00313 NodO calcium binding signature 4438 4446 6.7E-5 T 12-10-2018 Vc3S01_1605 20e75faeea4056a856f72b76f7d0778b 4566 PRINTS PR00313 NodO calcium binding signature 4447 4456 6.7E-5 T 12-10-2018 Vc3S01_1605 20e75faeea4056a856f72b76f7d0778b 4566 PRINTS PR00313 NodO calcium binding signature 4348 4359 6.7E-5 T 12-10-2018 Vc3S01_1605 20e75faeea4056a856f72b76f7d0778b 4566 SMART SM00237 3381 3476 0.0034 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 Vc3S01_1605 20e75faeea4056a856f72b76f7d0778b 4566 SUPERFAMILY SSF49313 3526 3614 1.44E-11 T 12-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 Vc3S01_1605 20e75faeea4056a856f72b76f7d0778b 4566 Pfam PF13519 von Willebrand factor type A domain 4078 4194 1.2E-11 T 12-10-2018 IPR002035 von Willebrand factor, type A Vc3S01_1605 20e75faeea4056a856f72b76f7d0778b 4566 SUPERFAMILY SSF53300 4039 4196 3.5E-17 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Vc3S01_1605 20e75faeea4056a856f72b76f7d0778b 4566 SMART SM00327 4075 4249 2.8E-7 T 12-10-2018 IPR002035 von Willebrand factor, type A Vc3S01_1605 20e75faeea4056a856f72b76f7d0778b 4566 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 4434 4452 - T 12-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site Vc3S01_1244 9055826ab1528cef6608619972c54547 182 SUPERFAMILY SSF55166 66 182 4.19E-33 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Vc3S01_1244 9055826ab1528cef6608619972c54547 182 Gene3D G3DSA:3.30.1380.10 66 182 2.8E-11 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Vc3S01_1244 9055826ab1528cef6608619972c54547 182 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 7 31 2.1E-5 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Vc3S01_1244 9055826ab1528cef6608619972c54547 182 Pfam PF05951 Bacterial protein of unknown function (DUF882) 35 182 6.9E-68 T 12-10-2018 IPR010275 Protein of unknown function DUF882 Vc3S01_1410 1982b42b454dc18bb74a3c1a23cc3321 208 Pfam PF01810 LysE type translocator 15 203 3.5E-39 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Vc3S01_1410 1982b42b454dc18bb74a3c1a23cc3321 208 PIRSF PIRSF006324 1 207 4.4E-62 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Vc3S01_1490 f609b5d4a2322f6d890492a80af32849 120 Gene3D G3DSA:3.10.180.10 1 120 9.9E-39 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Vc3S01_1490 f609b5d4a2322f6d890492a80af32849 120 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 116 3.1E-4 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Vc3S01_1490 f609b5d4a2322f6d890492a80af32849 120 PIRSF PIRSF039020 1 120 4.4E-38 T 12-10-2018 IPR026275 Glyoxalase/dioxygenase/EhpR Vc3S01_1490 f609b5d4a2322f6d890492a80af32849 120 SUPERFAMILY SSF54593 4 120 6.46E-19 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Vc3S01_0028 dfcae17847c020156e478ad62609aa03 248 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 25 243 3.0E-55 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Vc3S01_0028 dfcae17847c020156e478ad62609aa03 248 SMART SM00062 24 245 2.8E-74 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Vc3S01_0028 dfcae17847c020156e478ad62609aa03 248 SUPERFAMILY SSF53850 1 246 3.42E-57 T 12-10-2018 Vc3S01_0028 dfcae17847c020156e478ad62609aa03 248 SMART SM00079 24 244 0.0046 T 12-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 Vc3S01_0028 dfcae17847c020156e478ad62609aa03 248 Gene3D G3DSA:3.40.190.10 91 204 1.3E-28 T 12-10-2018 Vc3S01_0028 dfcae17847c020156e478ad62609aa03 248 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 46 59 - T 12-10-2018 IPR018313 Solute-binding protein family 3, conserved site Vc3S01_A1349 6c757ec45250b61800ebdb569d413c53 768 Pfam PF13435 Cytochrome c554 and c-prime 43 69 0.014 T 12-10-2018 IPR023155 Cytochrome c-552/4 Vc3S01_A1349 6c757ec45250b61800ebdb569d413c53 768 Pfam PF13435 Cytochrome c554 and c-prime 177 214 4.8E-4 T 12-10-2018 IPR023155 Cytochrome c-552/4 Vc3S01_A1349 6c757ec45250b61800ebdb569d413c53 768 Gene3D G3DSA:1.10.1130.10 140 361 3.4E-17 T 12-10-2018 Vc3S01_A1349 6c757ec45250b61800ebdb569d413c53 768 Gene3D G3DSA:1.10.1130.10 35 74 3.3E-5 T 12-10-2018 Vc3S01_A1349 6c757ec45250b61800ebdb569d413c53 768 SUPERFAMILY SSF48452 570 752 1.69E-19 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_A1349 6c757ec45250b61800ebdb569d413c53 768 SUPERFAMILY SSF48695 38 577 3.67E-74 T 12-10-2018 IPR036280 Multiheme cytochrome superfamily Vc3S01_A1349 6c757ec45250b61800ebdb569d413c53 768 Gene3D G3DSA:1.25.40.10 563 750 2.5E-21 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_A1349 6c757ec45250b61800ebdb569d413c53 768 Pfam PF13414 TPR repeat 594 634 2.5E-9 T 12-10-2018 Vc3S01_A1349 6c757ec45250b61800ebdb569d413c53 768 SMART SM00028 586 619 4.0E-6 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_A1349 6c757ec45250b61800ebdb569d413c53 768 SMART SM00028 620 653 13.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_A1724 ef8ece09b8a0fbdb73b2ee48375bd47d 672 Gene3D G3DSA:3.30.230.10 463 666 4.3E-76 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Vc3S01_A1724 ef8ece09b8a0fbdb73b2ee48375bd47d 672 SUPERFAMILY SSF54980 579 669 1.77E-21 T 12-10-2018 IPR035647 EF-G domain III/V-like Vc3S01_A1724 ef8ece09b8a0fbdb73b2ee48375bd47d 672 Pfam PF03764 Elongation factor G, domain IV 457 575 5.9E-37 T 12-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 Vc3S01_A1724 ef8ece09b8a0fbdb73b2ee48375bd47d 672 Pfam PF00009 Elongation factor Tu GTP binding domain 5 259 4.4E-27 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Vc3S01_A1724 ef8ece09b8a0fbdb73b2ee48375bd47d 672 SMART SM00889 458 576 2.4E-53 T 12-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 Vc3S01_A1724 ef8ece09b8a0fbdb73b2ee48375bd47d 672 SMART SM00838 578 666 2.7E-21 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like Vc3S01_A1724 ef8ece09b8a0fbdb73b2ee48375bd47d 672 Gene3D G3DSA:2.40.30.10 268 389 7.2E-26 T 12-10-2018 Vc3S01_A1724 ef8ece09b8a0fbdb73b2ee48375bd47d 672 Pfam PF00679 Elongation factor G C-terminus 579 665 9.6E-25 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like Vc3S01_A1724 ef8ece09b8a0fbdb73b2ee48375bd47d 672 SUPERFAMILY SSF54211 457 577 1.31E-37 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Vc3S01_A1724 ef8ece09b8a0fbdb73b2ee48375bd47d 672 Gene3D G3DSA:3.30.70.870 390 459 5.4E-18 T 12-10-2018 Vc3S01_A1724 ef8ece09b8a0fbdb73b2ee48375bd47d 672 SUPERFAMILY SSF52540 2 259 8.04E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A1724 ef8ece09b8a0fbdb73b2ee48375bd47d 672 SUPERFAMILY SSF54980 381 457 4.68E-17 T 12-10-2018 IPR035647 EF-G domain III/V-like Vc3S01_A1724 ef8ece09b8a0fbdb73b2ee48375bd47d 672 Gene3D G3DSA:3.40.50.300 1 264 1.7E-51 T 12-10-2018 Vc3S01_A1724 ef8ece09b8a0fbdb73b2ee48375bd47d 672 Gene3D G3DSA:3.30.70.240 582 653 4.3E-76 T 12-10-2018 Vc3S01_A1724 ef8ece09b8a0fbdb73b2ee48375bd47d 672 Pfam PF14492 Elongation Factor G, domain II 382 455 2.8E-22 T 12-10-2018 Vc3S01_A1724 ef8ece09b8a0fbdb73b2ee48375bd47d 672 SUPERFAMILY SSF50447 243 370 5.05E-21 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Vc3S01_0735 0265652012680aa6d28e25e31cb12931 199 SUPERFAMILY SSF52317 3 189 5.57E-44 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Vc3S01_0735 0265652012680aa6d28e25e31cb12931 199 Pfam PF01965 DJ-1/PfpI family 3 169 6.1E-41 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 Vc3S01_0735 0265652012680aa6d28e25e31cb12931 199 Gene3D G3DSA:3.40.50.880 1 193 2.3E-48 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Vc3S01_0735 0265652012680aa6d28e25e31cb12931 199 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 4 178 1.1E-62 T 12-10-2018 IPR006287 Protein/nucleic acid deglycase DJ-1 Reactome: R-HSA-3899300 Vc3S01_1041 1711a2cf4319d82bb8f7f8e6fb7def9e 765 Pfam PF02901 Pyruvate formate lyase-like 26 614 2.3E-196 T 12-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 Vc3S01_1041 1711a2cf4319d82bb8f7f8e6fb7def9e 765 ProSitePatterns PS00850 Glycine radical domain signature. 735 743 - T 12-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site Vc3S01_1041 1711a2cf4319d82bb8f7f8e6fb7def9e 765 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 11 765 0.0 T 12-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 Vc3S01_1041 1711a2cf4319d82bb8f7f8e6fb7def9e 765 Pfam PF01228 Glycine radical 630 746 4.1E-41 T 12-10-2018 IPR001150 Glycine radical domain GO:0003824 Vc3S01_1041 1711a2cf4319d82bb8f7f8e6fb7def9e 765 SUPERFAMILY SSF51998 7 764 3.36E-277 T 12-10-2018 Vc3S01_1041 1711a2cf4319d82bb8f7f8e6fb7def9e 765 PIRSF PIRSF000379 8 765 0.0 T 12-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 Vc3S01_1041 1711a2cf4319d82bb8f7f8e6fb7def9e 765 Gene3D G3DSA:3.20.70.20 5 765 0.0 T 12-10-2018 Vc3S01_0149 0f457f8b468574eb006ff77fb6c4e789 446 Pfam PF13091 PLD-like domain 34 171 1.2E-7 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Vc3S01_0149 0f457f8b468574eb006ff77fb6c4e789 446 Pfam PF13091 PLD-like domain 251 401 6.6E-24 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Vc3S01_0149 0f457f8b468574eb006ff77fb6c4e789 446 Gene3D G3DSA:3.30.870.10 18 225 8.8E-167 T 12-10-2018 Vc3S01_0149 0f457f8b468574eb006ff77fb6c4e789 446 SUPERFAMILY SSF56024 248 424 2.12E-26 T 12-10-2018 Vc3S01_0149 0f457f8b468574eb006ff77fb6c4e789 446 SMART SM00155 126 152 5.3E-4 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 Vc3S01_0149 0f457f8b468574eb006ff77fb6c4e789 446 SMART SM00155 347 374 0.079 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 Vc3S01_0149 0f457f8b468574eb006ff77fb6c4e789 446 SUPERFAMILY SSF56024 16 182 6.54E-27 T 12-10-2018 Vc3S01_0149 0f457f8b468574eb006ff77fb6c4e789 446 PIRSF PIRSF000850 3 446 8.5E-214 T 12-10-2018 Vc3S01_0149 0f457f8b468574eb006ff77fb6c4e789 446 Gene3D G3DSA:3.30.870.10 12 441 8.8E-167 T 12-10-2018 Vc3S01_1789 85b8a825859dd4f57a8c2b410d7c71dd 311 Gene3D G3DSA:3.40.190.10 92 172 4.3E-14 T 12-10-2018 Vc3S01_1789 85b8a825859dd4f57a8c2b410d7c71dd 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 68 2.9E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_1789 85b8a825859dd4f57a8c2b410d7c71dd 311 SUPERFAMILY SSF53850 92 272 8.84E-20 T 12-10-2018 Vc3S01_1789 85b8a825859dd4f57a8c2b410d7c71dd 311 Gene3D G3DSA:1.10.10.10 1 90 1.1E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_1789 85b8a825859dd4f57a8c2b410d7c71dd 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 1.4E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_1789 85b8a825859dd4f57a8c2b410d7c71dd 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 1.4E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_1789 85b8a825859dd4f57a8c2b410d7c71dd 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 1.4E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_1789 85b8a825859dd4f57a8c2b410d7c71dd 311 Gene3D G3DSA:3.40.190.10 173 270 4.3E-14 T 12-10-2018 Vc3S01_1789 85b8a825859dd4f57a8c2b410d7c71dd 311 SUPERFAMILY SSF46785 8 88 2.54E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_1789 85b8a825859dd4f57a8c2b410d7c71dd 311 Pfam PF03466 LysR substrate binding domain 96 269 4.6E-10 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_A1046 976868cd905aa6a8b4e74573e7cf63f8 293 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 246 288 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Vc3S01_A1046 976868cd905aa6a8b4e74573e7cf63f8 293 Gene3D G3DSA:1.10.10.60 188 293 1.3E-27 T 12-10-2018 Vc3S01_A1046 976868cd905aa6a8b4e74573e7cf63f8 293 Pfam PF06719 AraC-type transcriptional regulator N-terminus 27 180 1.9E-35 T 12-10-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal Vc3S01_A1046 976868cd905aa6a8b4e74573e7cf63f8 293 Pfam PF12833 Helix-turn-helix domain 215 292 4.7E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_A1046 976868cd905aa6a8b4e74573e7cf63f8 293 SUPERFAMILY SSF46689 245 292 2.24E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_A1046 976868cd905aa6a8b4e74573e7cf63f8 293 SMART SM00342 209 292 2.3E-26 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_A1046 976868cd905aa6a8b4e74573e7cf63f8 293 SUPERFAMILY SSF46689 193 243 6.81E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_A0780 91871f8130c117eb6dde09c718721217 657 Pfam PF00501 AMP-binding enzyme 104 532 1.1E-45 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Vc3S01_A0780 91871f8130c117eb6dde09c718721217 657 TIGRFAM TIGR01217 ac_ac_CoA_syn: acetoacetate-CoA ligase 5 648 2.7E-238 T 12-10-2018 IPR005914 Acetoacetyl-CoA synthase GO:0006629|GO:0030729 KEGG: 00280+6.2.1.16|KEGG: 00650+6.2.1.16|Reactome: R-HSA-77111 Vc3S01_A0780 91871f8130c117eb6dde09c718721217 657 SUPERFAMILY SSF56801 36 632 5.49E-122 T 12-10-2018 Vc3S01_A0780 91871f8130c117eb6dde09c718721217 657 ProSitePatterns PS00455 Putative AMP-binding domain signature. 277 288 - T 12-10-2018 IPR020845 AMP-binding, conserved site Vc3S01_A0780 91871f8130c117eb6dde09c718721217 657 Gene3D G3DSA:3.40.50.12780 69 528 1.8E-56 T 12-10-2018 Vc3S01_A0780 91871f8130c117eb6dde09c718721217 657 Gene3D G3DSA:3.30.300.30 531 655 9.2E-15 T 12-10-2018 Vc3S01_2932 98717f215155676eca4114be3006e924 123 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 123 1.5E-58 T 12-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 Vc3S01_2932 98717f215155676eca4114be3006e924 123 Gene3D G3DSA:2.40.150.20 1 123 3.9E-56 T 12-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 Vc3S01_2932 98717f215155676eca4114be3006e924 123 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 123 27.363 T 12-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 Vc3S01_2932 98717f215155676eca4114be3006e924 123 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 12-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_2932 98717f215155676eca4114be3006e924 123 SMART SM01374 1 123 1.3E-85 T 12-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 Vc3S01_2932 98717f215155676eca4114be3006e924 123 Pfam PF00238 Ribosomal protein L14p/L23e 1 123 2.1E-54 T 12-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 Vc3S01_2932 98717f215155676eca4114be3006e924 123 SUPERFAMILY SSF50193 2 122 4.19E-51 T 12-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 Vc3S01_0030 079ab8aee6a0f4b18f0ce20e3286845e 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 130 243 7.8E-36 T 12-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 Vc3S01_0030 079ab8aee6a0f4b18f0ce20e3286845e 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 1.3E-108 T 12-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 Vc3S01_0030 079ab8aee6a0f4b18f0ce20e3286845e 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 245 365 3.5E-37 T 12-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 Vc3S01_0030 079ab8aee6a0f4b18f0ce20e3286845e 366 Gene3D G3DSA:3.10.150.10 1 122 4.3E-42 T 12-10-2018 Vc3S01_0030 079ab8aee6a0f4b18f0ce20e3286845e 366 SUPERFAMILY SSF55979 245 366 8.03E-36 T 12-10-2018 Vc3S01_0030 079ab8aee6a0f4b18f0ce20e3286845e 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 119 2.0E-38 T 12-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 Vc3S01_0030 079ab8aee6a0f4b18f0ce20e3286845e 366 SUPERFAMILY SSF55979 126 244 3.38E-28 T 12-10-2018 Vc3S01_0030 079ab8aee6a0f4b18f0ce20e3286845e 366 Gene3D G3DSA:3.10.150.10 124 247 4.1E-36 T 12-10-2018 Vc3S01_0030 079ab8aee6a0f4b18f0ce20e3286845e 366 PIRSF PIRSF000804 1 366 2.0E-117 T 12-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 Vc3S01_0030 079ab8aee6a0f4b18f0ce20e3286845e 366 SUPERFAMILY SSF55979 1 118 1.36E-30 T 12-10-2018 Vc3S01_0030 079ab8aee6a0f4b18f0ce20e3286845e 366 Gene3D G3DSA:3.10.150.10 248 366 9.6E-39 T 12-10-2018 Vc3S01_0030 079ab8aee6a0f4b18f0ce20e3286845e 366 SMART SM00480 17 362 1.0E-149 T 12-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 Vc3S01_A0058 2bc140d41d4a75f6f6a65b5495e3ac4e 329 Gene3D G3DSA:1.10.3470.10 2 329 5.4E-91 T 12-10-2018 IPR037294 ABC transporter, BtuC-like Vc3S01_A0058 2bc140d41d4a75f6f6a65b5495e3ac4e 329 SUPERFAMILY SSF81345 3 327 2.62E-74 T 12-10-2018 IPR037294 ABC transporter, BtuC-like Vc3S01_A0058 2bc140d41d4a75f6f6a65b5495e3ac4e 329 Pfam PF01032 FecCD transport family 13 327 3.2E-86 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Vc3S01_2418 ed6a74d36562ef29f6c7a6c56f17364f 554 Gene3D G3DSA:3.60.20.10 2 193 3.5E-69 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Vc3S01_2418 ed6a74d36562ef29f6c7a6c56f17364f 554 Pfam PF00733 Asparagine synthase 211 366 6.0E-56 T 12-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 Vc3S01_2418 ed6a74d36562ef29f6c7a6c56f17364f 554 Pfam PF13537 Glutamine amidotransferase domain 48 165 4.7E-40 T 12-10-2018 IPR017932 Glutamine amidotransferase type 2 domain Vc3S01_2418 ed6a74d36562ef29f6c7a6c56f17364f 554 PIRSF PIRSF001589 362 506 3.3E-27 T 12-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 Vc3S01_2418 ed6a74d36562ef29f6c7a6c56f17364f 554 PIRSF PIRSF001589 1 368 1.0E-104 T 12-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 Vc3S01_2418 ed6a74d36562ef29f6c7a6c56f17364f 554 SUPERFAMILY SSF56235 1 196 7.29E-56 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Vc3S01_2418 ed6a74d36562ef29f6c7a6c56f17364f 554 Gene3D G3DSA:3.40.50.620 194 514 3.6E-112 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Vc3S01_2418 ed6a74d36562ef29f6c7a6c56f17364f 554 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 372 2.7E-114 T 12-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 Vc3S01_2418 ed6a74d36562ef29f6c7a6c56f17364f 554 SUPERFAMILY SSF52402 208 481 2.79E-74 T 12-10-2018 Vc3S01_2945 2a47bbfec9148221f76e0d44d018309f 733 TIGRFAM TIGR00595 priA: primosomal protein N' 221 729 2.9E-191 T 12-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 Vc3S01_2945 2a47bbfec9148221f76e0d44d018309f 733 Gene3D G3DSA:3.40.50.300 185 379 2.9E-77 T 12-10-2018 Vc3S01_2945 2a47bbfec9148221f76e0d44d018309f 733 Pfam PF00270 DEAD/DEAH box helicase 219 364 1.3E-14 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Vc3S01_2945 2a47bbfec9148221f76e0d44d018309f 733 Gene3D G3DSA:1.10.8.630 4 113 1.4E-34 T 12-10-2018 Vc3S01_2945 2a47bbfec9148221f76e0d44d018309f 733 SMART SM00490 492 589 6.7E-13 T 12-10-2018 IPR001650 Helicase, C-terminal Vc3S01_2945 2a47bbfec9148221f76e0d44d018309f 733 SUPERFAMILY SSF52540 71 379 8.89E-41 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2945 2a47bbfec9148221f76e0d44d018309f 733 Hamap MF_00983 Probable primosomal protein N' [priA]. 8 732 25.237 T 12-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 Vc3S01_2945 2a47bbfec9148221f76e0d44d018309f 733 Pfam PF00271 Helicase conserved C-terminal domain 499 588 2.1E-8 T 12-10-2018 IPR001650 Helicase, C-terminal Vc3S01_2945 2a47bbfec9148221f76e0d44d018309f 733 SUPERFAMILY SSF52540 461 631 7.65E-29 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2945 2a47bbfec9148221f76e0d44d018309f 733 SMART SM00487 196 395 7.3E-17 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Vc3S01_A1029 3eea1bb6eae5e0a71ade0d3ff957d471 357 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 351 2.5E-72 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Vc3S01_A1029 3eea1bb6eae5e0a71ade0d3ff957d471 357 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 62 258 1.5E-13 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Vc3S01_A1029 3eea1bb6eae5e0a71ade0d3ff957d471 357 Gene3D G3DSA:2.40.30.170 58 278 8.2E-75 T 12-10-2018 Vc3S01_A1029 3eea1bb6eae5e0a71ade0d3ff957d471 357 Gene3D G3DSA:2.40.420.20 279 348 8.2E-75 T 12-10-2018 Vc3S01_A1029 3eea1bb6eae5e0a71ade0d3ff957d471 357 SUPERFAMILY SSF111369 57 274 4.32E-33 T 12-10-2018 Vc3S01_A1029 3eea1bb6eae5e0a71ade0d3ff957d471 357 Gene3D G3DSA:2.40.50.100 65 197 8.2E-75 T 12-10-2018 Vc3S01_A1029 3eea1bb6eae5e0a71ade0d3ff957d471 357 Gene3D G3DSA:1.10.287.470 99 158 8.2E-75 T 12-10-2018 Vc3S01_p40096 d08861f412585d4857a918e8ec8480cf 679 SUPERFAMILY SSF56712 1 613 7.98E-132 T 12-10-2018 IPR023405 DNA topoisomerase, type IA, core domain Vc3S01_p40096 d08861f412585d4857a918e8ec8480cf 679 Gene3D G3DSA:2.70.20.10 210 480 4.9E-118 T 12-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 Vc3S01_p40096 d08861f412585d4857a918e8ec8480cf 679 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 521 535 4.4E-19 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Vc3S01_p40096 d08861f412585d4857a918e8ec8480cf 679 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 313 322 4.4E-19 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Vc3S01_p40096 d08861f412585d4857a918e8ec8480cf 679 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 394 410 4.4E-19 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Vc3S01_p40096 d08861f412585d4857a918e8ec8480cf 679 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 94 107 4.4E-19 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Vc3S01_p40096 d08861f412585d4857a918e8ec8480cf 679 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 186 204 4.4E-19 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Vc3S01_p40096 d08861f412585d4857a918e8ec8480cf 679 SUPERFAMILY SSF57783 621 658 3.57E-10 T 12-10-2018 Vc3S01_p40096 d08861f412585d4857a918e8ec8480cf 679 Gene3D G3DSA:1.10.290.10 279 408 4.9E-118 T 12-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 Vc3S01_p40096 d08861f412585d4857a918e8ec8480cf 679 SMART SM00493 1 120 3.8E-10 T 12-10-2018 IPR006171 TOPRIM domain Vc3S01_p40096 d08861f412585d4857a918e8ec8480cf 679 Gene3D G3DSA:3.40.50.140 1 149 3.3E-39 T 12-10-2018 Vc3S01_p40096 d08861f412585d4857a918e8ec8480cf 679 Gene3D G3DSA:1.10.460.10 155 607 4.9E-118 T 12-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 Vc3S01_p40096 d08861f412585d4857a918e8ec8480cf 679 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 307 322 - T 12-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 Vc3S01_p40096 d08861f412585d4857a918e8ec8480cf 679 Pfam PF01751 Toprim domain 3 125 1.8E-11 T 12-10-2018 IPR006171 TOPRIM domain Vc3S01_p40096 d08861f412585d4857a918e8ec8480cf 679 Pfam PF01131 DNA topoisomerase 152 599 7.5E-81 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Vc3S01_p40096 d08861f412585d4857a918e8ec8480cf 679 SMART SM00436 121 215 5.2E-12 T 12-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 Vc3S01_p40096 d08861f412585d4857a918e8ec8480cf 679 Gene3D G3DSA:3.30.65.10 610 663 2.9E-8 T 12-10-2018 Vc3S01_p40096 d08861f412585d4857a918e8ec8480cf 679 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 627 659 3.8E-10 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 Vc3S01_p40096 d08861f412585d4857a918e8ec8480cf 679 SMART SM00437 270 565 7.9E-34 T 12-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 Vc3S01_2234 6d50dc523295910a85aef3ce379d5847 67 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 1 62 15.974 T 12-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS Vc3S01_2234 6d50dc523295910a85aef3ce379d5847 67 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 1 63 3.1E-24 T 12-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 Vc3S01_2234 6d50dc523295910a85aef3ce379d5847 67 SUPERFAMILY SSF54736 1 66 2.56E-22 T 12-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Vc3S01_2234 6d50dc523295910a85aef3ce379d5847 67 Gene3D G3DSA:3.30.1390.10 1 67 1.5E-29 T 12-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Vc3S01_0122 9496d8b07c9f91c226a99e60a2d83d19 416 Gene3D G3DSA:1.20.120.140 114 411 1.1E-117 T 12-10-2018 Vc3S01_0122 9496d8b07c9f91c226a99e60a2d83d19 416 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 140 412 1.1E-115 T 12-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 Vc3S01_0122 9496d8b07c9f91c226a99e60a2d83d19 416 SMART SM00962 212 413 2.1E-123 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Vc3S01_0122 9496d8b07c9f91c226a99e60a2d83d19 416 SUPERFAMILY SSF47364 112 191 1.07E-22 T 12-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 Vc3S01_0122 9496d8b07c9f91c226a99e60a2d83d19 416 Pfam PF00448 SRP54-type protein, GTPase domain 213 412 1.3E-77 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Vc3S01_0122 9496d8b07c9f91c226a99e60a2d83d19 416 SUPERFAMILY SSF52540 210 413 4.14E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0122 9496d8b07c9f91c226a99e60a2d83d19 416 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 140 413 65.219 T 12-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 Vc3S01_0122 9496d8b07c9f91c226a99e60a2d83d19 416 Gene3D G3DSA:3.40.50.300 209 401 1.1E-117 T 12-10-2018 Vc3S01_0122 9496d8b07c9f91c226a99e60a2d83d19 416 Pfam PF02881 SRP54-type protein, helical bundle domain 131 193 1.2E-13 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Vc3S01_0122 9496d8b07c9f91c226a99e60a2d83d19 416 SMART SM00382 211 403 1.4E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_0122 9496d8b07c9f91c226a99e60a2d83d19 416 SMART SM00963 117 197 1.4E-27 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Vc3S01_0122 9496d8b07c9f91c226a99e60a2d83d19 416 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 386 399 - T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Vc3S01_A1201 4b0e8424f9afc7b3de5713077b2e8c35 290 SUPERFAMILY SSF51182 60 111 2.28E-6 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily Vc3S01_A1201 4b0e8424f9afc7b3de5713077b2e8c35 290 Pfam PF02311 AraC-like ligand binding domain 49 124 6.1E-6 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 Vc3S01_A1201 4b0e8424f9afc7b3de5713077b2e8c35 290 Pfam PF12833 Helix-turn-helix domain 209 285 4.9E-17 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_A1201 4b0e8424f9afc7b3de5713077b2e8c35 290 SMART SM00342 202 284 1.7E-18 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_A1201 4b0e8424f9afc7b3de5713077b2e8c35 290 SUPERFAMILY SSF46689 238 286 9.41E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_A1201 4b0e8424f9afc7b3de5713077b2e8c35 290 Gene3D G3DSA:1.10.10.60 246 289 8.1E-8 T 12-10-2018 Vc3S01_A1201 4b0e8424f9afc7b3de5713077b2e8c35 290 Gene3D G3DSA:1.10.10.60 193 245 5.9E-9 T 12-10-2018 Vc3S01_1685 0f0d04b890f6eba88ea3bdd590841597 274 Gene3D G3DSA:3.40.140.10 122 272 1.7E-42 T 12-10-2018 Vc3S01_1685 0f0d04b890f6eba88ea3bdd590841597 274 Pfam PF02634 FdhD/NarQ family 35 266 7.0E-74 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 Vc3S01_1685 0f0d04b890f6eba88ea3bdd590841597 274 PIRSF PIRSF015626 1 271 7.9E-99 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 Vc3S01_1685 0f0d04b890f6eba88ea3bdd590841597 274 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 11 267 26.227 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 Vc3S01_1685 0f0d04b890f6eba88ea3bdd590841597 274 SUPERFAMILY SSF53927 15 266 3.91E-71 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Vc3S01_1685 0f0d04b890f6eba88ea3bdd590841597 274 Gene3D G3DSA:3.10.20.10 36 119 2.3E-10 T 12-10-2018 Vc3S01_A1791 50e7ae21307231bc5376688347f3a6c7 154 ProSitePatterns PS00893 Nudix box signature. 50 71 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Vc3S01_A1791 50e7ae21307231bc5376688347f3a6c7 154 Pfam PF00293 NUDIX domain 22 132 3.9E-23 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Vc3S01_A1791 50e7ae21307231bc5376688347f3a6c7 154 Gene3D G3DSA:3.90.79.10 2 147 9.8E-41 T 12-10-2018 Vc3S01_A1791 50e7ae21307231bc5376688347f3a6c7 154 SUPERFAMILY SSF55811 18 139 2.03E-30 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Vc3S01_A1791 50e7ae21307231bc5376688347f3a6c7 154 PRINTS PR00502 NUDIX hydrolase family signature 45 59 1.2E-7 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Vc3S01_A1791 50e7ae21307231bc5376688347f3a6c7 154 PRINTS PR00502 NUDIX hydrolase family signature 59 74 1.2E-7 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Vc3S01_2561 70e68b3703613de30e9dbc5023b2bed4 621 SUPERFAMILY SSF52518 9 381 3.57E-76 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold Vc3S01_2561 70e68b3703613de30e9dbc5023b2bed4 621 Gene3D G3DSA:3.40.50.970 317 489 9.2E-65 T 12-10-2018 Vc3S01_2561 70e68b3703613de30e9dbc5023b2bed4 621 SUPERFAMILY SSF52922 492 619 6.81E-34 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Vc3S01_2561 70e68b3703613de30e9dbc5023b2bed4 621 SUPERFAMILY SSF52518 317 504 2.62E-57 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold Vc3S01_2561 70e68b3703613de30e9dbc5023b2bed4 621 SMART SM00861 319 483 7.8E-63 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Vc3S01_2561 70e68b3703613de30e9dbc5023b2bed4 621 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 12 619 7.4E-303 T 12-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Vc3S01_2561 70e68b3703613de30e9dbc5023b2bed4 621 ProSitePatterns PS00801 Transketolase signature 1. 36 55 - T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Vc3S01_2561 70e68b3703613de30e9dbc5023b2bed4 621 Pfam PF02779 Transketolase, pyrimidine binding domain 319 478 1.0E-36 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Vc3S01_2561 70e68b3703613de30e9dbc5023b2bed4 621 Pfam PF02780 Transketolase, C-terminal domain 495 611 1.4E-28 T 12-10-2018 IPR033248 Transketolase, C-terminal domain Vc3S01_2561 70e68b3703613de30e9dbc5023b2bed4 621 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 12-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Vc3S01_2561 70e68b3703613de30e9dbc5023b2bed4 621 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 10 620 45.996 T 12-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Vc3S01_2561 70e68b3703613de30e9dbc5023b2bed4 621 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 14 282 1.9E-119 T 12-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Vc3S01_2561 70e68b3703613de30e9dbc5023b2bed4 621 Gene3D G3DSA:3.40.50.920 495 621 4.0E-45 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Vc3S01_0206 a6d116b4ca496384d487d2079a733cde 211 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 7.0E-20 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_0206 a6d116b4ca496384d487d2079a733cde 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 3.6E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_0206 a6d116b4ca496384d487d2079a733cde 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 3.6E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_0206 a6d116b4ca496384d487d2079a733cde 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 3.6E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_0206 a6d116b4ca496384d487d2079a733cde 211 Gene3D G3DSA:1.10.10.10 148 211 5.0E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_0206 a6d116b4ca496384d487d2079a733cde 211 SUPERFAMILY SSF52172 4 173 7.39E-27 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_0206 a6d116b4ca496384d487d2079a733cde 211 SMART SM00448 5 119 6.6E-21 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_0206 a6d116b4ca496384d487d2079a733cde 211 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_0206 a6d116b4ca496384d487d2079a733cde 211 SMART SM00421 147 204 7.3E-23 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_0206 a6d116b4ca496384d487d2079a733cde 211 Pfam PF00072 Response regulator receiver domain 7 120 4.0E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_0206 a6d116b4ca496384d487d2079a733cde 211 Gene3D G3DSA:3.40.50.2300 3 132 2.1E-27 T 12-10-2018 Vc3S01_0194 0293f97d004169fa7f0ed237475d0f43 149 SUPERFAMILY SSF52304 4 145 6.41E-62 T 12-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Vc3S01_0194 0293f97d004169fa7f0ed237475d0f43 149 Pfam PF01220 Dehydroquinase class II 6 142 3.2E-62 T 12-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Vc3S01_0194 0293f97d004169fa7f0ed237475d0f43 149 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 6 145 2.3E-64 T 12-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Vc3S01_0194 0293f97d004169fa7f0ed237475d0f43 149 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 21 149 2.0E-69 T 12-10-2018 Vc3S01_0194 0293f97d004169fa7f0ed237475d0f43 149 PIRSF PIRSF001399 3 149 7.2E-60 T 12-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Vc3S01_0194 0293f97d004169fa7f0ed237475d0f43 149 ProSitePatterns PS01029 Dehydroquinase class II signature. 10 27 - T 12-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Vc3S01_0194 0293f97d004169fa7f0ed237475d0f43 149 Gene3D G3DSA:3.40.50.9100 1 149 9.4E-67 T 12-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Vc3S01_0194 0293f97d004169fa7f0ed237475d0f43 149 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 149 74.864 T 12-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Vc3S01_A1861 1c944c63802b8b28e826590ed691a34c 742 SUPERFAMILY SSF51445 188 631 2.34E-106 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily Vc3S01_A1861 1c944c63802b8b28e826590ed691a34c 742 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 151 221 1.3E-18 T 12-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 Vc3S01_A1861 1c944c63802b8b28e826590ed691a34c 742 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 643 740 4.0E-17 T 12-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 Vc3S01_A1861 1c944c63802b8b28e826590ed691a34c 742 PIRSF PIRSF000463 24 742 2.0E-281 T 12-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 Vc3S01_A1861 1c944c63802b8b28e826590ed691a34c 742 SUPERFAMILY SSF81296 36 118 1.42E-12 T 12-10-2018 IPR014756 Immunoglobulin E-set Vc3S01_A1861 1c944c63802b8b28e826590ed691a34c 742 Gene3D G3DSA:2.60.40.1180 638 740 2.3E-30 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta Vc3S01_A1861 1c944c63802b8b28e826590ed691a34c 742 Gene3D G3DSA:2.60.40.10 20 235 2.2E-51 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_A1861 1c944c63802b8b28e826590ed691a34c 742 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 106 741 41.12 T 12-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 Vc3S01_A1861 1c944c63802b8b28e826590ed691a34c 742 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 131 738 1.2E-245 T 12-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 Vc3S01_A1861 1c944c63802b8b28e826590ed691a34c 742 SUPERFAMILY SSF51011 638 740 1.71E-28 T 12-10-2018 Vc3S01_A1861 1c944c63802b8b28e826590ed691a34c 742 Pfam PF00128 Alpha amylase, catalytic domain 290 364 1.2E-5 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Vc3S01_A1861 1c944c63802b8b28e826590ed691a34c 742 Gene3D G3DSA:3.20.20.80 239 637 1.9E-159 T 12-10-2018 Vc3S01_A1861 1c944c63802b8b28e826590ed691a34c 742 SMART SM00642 265 619 8.7E-6 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Vc3S01_1800 2145bba2776a9c890df0b3976f016723 154 Gene3D G3DSA:1.10.357.10 1 152 2.3E-45 T 12-10-2018 Vc3S01_1800 2145bba2776a9c890df0b3976f016723 154 SUPERFAMILY SSF46689 1 74 1.59E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_1800 2145bba2776a9c890df0b3976f016723 154 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 58 1.9E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Vc3S01_A1959 21e24f3b4a372361f50d7eea7ab3598e 213 Pfam PF13489 Methyltransferase domain 35 189 5.1E-12 T 12-10-2018 Vc3S01_A1959 21e24f3b4a372361f50d7eea7ab3598e 213 SUPERFAMILY SSF53335 17 205 8.44E-21 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Vc3S01_A1959 21e24f3b4a372361f50d7eea7ab3598e 213 Gene3D G3DSA:3.40.50.150 12 200 2.7E-22 T 12-10-2018 Vc3S01_A0537 407417fc93b29da23a64fe27a2c16512 515 Gene3D G3DSA:1.20.58.370 7 96 1.6E-32 T 12-10-2018 IPR035277 MalF, N-terminal Vc3S01_A0537 407417fc93b29da23a64fe27a2c16512 515 Gene3D G3DSA:1.10.3720.10 271 513 1.6E-69 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_A0537 407417fc93b29da23a64fe27a2c16512 515 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 298 503 7.6E-17 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Vc3S01_A0537 407417fc93b29da23a64fe27a2c16512 515 Gene3D G3DSA:3.10.650.10 99 269 4.7E-51 T 12-10-2018 Vc3S01_A0537 407417fc93b29da23a64fe27a2c16512 515 SUPERFAMILY SSF161098 263 504 1.1E-58 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_A0537 407417fc93b29da23a64fe27a2c16512 515 Pfam PF14785 Maltose transport system permease protein MalF P2 domain 101 261 5.6E-58 T 12-10-2018 IPR029345 Maltose transport system permease protein MalF, P2 domain Vc3S01_A0537 407417fc93b29da23a64fe27a2c16512 515 Gene3D G3DSA:2.40.430.10 119 205 4.7E-51 T 12-10-2018 Vc3S01_A0537 407417fc93b29da23a64fe27a2c16512 515 SUPERFAMILY SSF160964 15 261 2.62E-81 T 12-10-2018 Vc3S01_A1127 dabba2fc4bb75fe5d8754546b04251b1 439 Pfam PF13500 AAA domain 17 192 7.4E-12 T 12-10-2018 Vc3S01_A1127 dabba2fc4bb75fe5d8754546b04251b1 439 SUPERFAMILY SSF52317 211 402 4.44E-37 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Vc3S01_A1127 dabba2fc4bb75fe5d8754546b04251b1 439 Gene3D G3DSA:3.40.50.880 211 388 3.0E-20 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Vc3S01_A1127 dabba2fc4bb75fe5d8754546b04251b1 439 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 1 436 3.6E-130 T 12-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 Vc3S01_A1127 dabba2fc4bb75fe5d8754546b04251b1 439 Gene3D G3DSA:3.40.50.300 2 203 1.3E-35 T 12-10-2018 Vc3S01_A1127 dabba2fc4bb75fe5d8754546b04251b1 439 SUPERFAMILY SSF52540 7 196 9.56E-36 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A1127 dabba2fc4bb75fe5d8754546b04251b1 439 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 439 176.489 T 12-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 Vc3S01_A1127 dabba2fc4bb75fe5d8754546b04251b1 439 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 210 394 3.9E-58 T 12-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 Vc3S01_2014 5175bdbf4a3c2cdb40d0d3963a3981b9 1036 PRINTS PR00702 Acriflavin resistance protein family signature 27 51 4.0E-25 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_2014 5175bdbf4a3c2cdb40d0d3963a3981b9 1036 PRINTS PR00702 Acriflavin resistance protein family signature 55 73 4.0E-25 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_2014 5175bdbf4a3c2cdb40d0d3963a3981b9 1036 PRINTS PR00702 Acriflavin resistance protein family signature 349 372 4.0E-25 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_2014 5175bdbf4a3c2cdb40d0d3963a3981b9 1036 PRINTS PR00702 Acriflavin resistance protein family signature 456 479 4.0E-25 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_2014 5175bdbf4a3c2cdb40d0d3963a3981b9 1036 PRINTS PR00702 Acriflavin resistance protein family signature 481 504 4.0E-25 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_2014 5175bdbf4a3c2cdb40d0d3963a3981b9 1036 PRINTS PR00702 Acriflavin resistance protein family signature 403 427 4.0E-25 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_2014 5175bdbf4a3c2cdb40d0d3963a3981b9 1036 Gene3D G3DSA:3.30.70.1320 153 345 1.0E-259 T 12-10-2018 Vc3S01_2014 5175bdbf4a3c2cdb40d0d3963a3981b9 1036 Pfam PF00873 AcrB/AcrD/AcrF family 21 1030 2.2E-171 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_2014 5175bdbf4a3c2cdb40d0d3963a3981b9 1036 Gene3D G3DSA:1.20.1640.10 523 1026 1.0E-259 T 12-10-2018 Vc3S01_2014 5175bdbf4a3c2cdb40d0d3963a3981b9 1036 Gene3D G3DSA:3.30.2090.10 724 814 1.0E-259 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Vc3S01_2014 5175bdbf4a3c2cdb40d0d3963a3981b9 1036 SUPERFAMILY SSF82693 57 152 9.77E-23 T 12-10-2018 Vc3S01_2014 5175bdbf4a3c2cdb40d0d3963a3981b9 1036 SUPERFAMILY SSF82866 309 508 1.31E-33 T 12-10-2018 Vc3S01_2014 5175bdbf4a3c2cdb40d0d3963a3981b9 1036 SUPERFAMILY SSF82866 810 1033 1.96E-47 T 12-10-2018 Vc3S01_2014 5175bdbf4a3c2cdb40d0d3963a3981b9 1036 SUPERFAMILY SSF82714 731 805 2.09E-9 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Vc3S01_2014 5175bdbf4a3c2cdb40d0d3963a3981b9 1036 Gene3D G3DSA:3.30.2090.10 196 288 1.0E-259 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Vc3S01_2014 5175bdbf4a3c2cdb40d0d3963a3981b9 1036 SUPERFAMILY SSF82714 201 284 2.49E-12 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Vc3S01_2014 5175bdbf4a3c2cdb40d0d3963a3981b9 1036 Gene3D G3DSA:3.30.70.1430 57 822 1.0E-259 T 12-10-2018 Vc3S01_2014 5175bdbf4a3c2cdb40d0d3963a3981b9 1036 Gene3D G3DSA:1.20.1640.10 27 522 1.0E-259 T 12-10-2018 Vc3S01_2014 5175bdbf4a3c2cdb40d0d3963a3981b9 1036 Gene3D G3DSA:3.30.70.1440 673 874 1.0E-259 T 12-10-2018 Vc3S01_2014 5175bdbf4a3c2cdb40d0d3963a3981b9 1036 SUPERFAMILY SSF82693 153 342 2.25E-19 T 12-10-2018 Vc3S01_2014 5175bdbf4a3c2cdb40d0d3963a3981b9 1036 Gene3D G3DSA:3.30.70.1430 574 672 1.0E-259 T 12-10-2018 Vc3S01_2827 82b2ecb72009aa2f24cf802a13d14316 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.588 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_2827 82b2ecb72009aa2f24cf802a13d14316 71 Pfam PF01165 Ribosomal protein S21 4 56 4.3E-23 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_2827 82b2ecb72009aa2f24cf802a13d14316 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 44 2.0E-10 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_2827 82b2ecb72009aa2f24cf802a13d14316 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 12-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_2827 82b2ecb72009aa2f24cf802a13d14316 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 7.2E-25 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_2827 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.6E-16 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_2827 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.6E-16 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_2827 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.6E-16 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_2827 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.6E-16 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_2827 82b2ecb72009aa2f24cf802a13d14316 71 Gene3D G3DSA:1.20.5.1150 16 54 1.4E-21 T 12-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_A1744 5bac2f5f40a1fd512356dcec0201013f 436 SUPERFAMILY SSF51690 129 409 2.16E-88 T 12-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 Vc3S01_A1744 5bac2f5f40a1fd512356dcec0201013f 436 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 7 413 43.745 T 12-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 Vc3S01_A1744 5bac2f5f40a1fd512356dcec0201013f 436 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 10 412 2.4E-155 T 12-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 Vc3S01_A1744 5bac2f5f40a1fd512356dcec0201013f 436 SUPERFAMILY SSF54675 8 148 1.59E-33 T 12-10-2018 Vc3S01_A1744 5bac2f5f40a1fd512356dcec0201013f 436 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 178 412 3.0E-81 T 12-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 Vc3S01_A1744 5bac2f5f40a1fd512356dcec0201013f 436 PIRSF PIRSF000484 1 396 1.5E-68 T 12-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 Vc3S01_A1744 5bac2f5f40a1fd512356dcec0201013f 436 Gene3D G3DSA:3.20.140.10 1 427 1.2E-162 T 12-10-2018 Vc3S01_1890 9063163949e5f8b64709ba24d52a3d00 166 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 1 71 9.6E-28 T 12-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Vc3S01_1890 9063163949e5f8b64709ba24d52a3d00 166 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 166 28.174 T 12-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Vc3S01_1890 9063163949e5f8b64709ba24d52a3d00 166 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 78 164 5.9E-37 T 12-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 Vc3S01_1890 9063163949e5f8b64709ba24d52a3d00 166 Gene3D G3DSA:3.10.20.80 1 70 1.9E-28 T 12-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Vc3S01_1890 9063163949e5f8b64709ba24d52a3d00 166 ProSitePatterns PS00938 Initiation factor 3 signature. 53 66 - T 12-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 Vc3S01_1890 9063163949e5f8b64709ba24d52a3d00 166 Gene3D G3DSA:3.30.110.10 71 166 1.1E-38 T 12-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 Vc3S01_1890 9063163949e5f8b64709ba24d52a3d00 166 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 2 166 7.6E-71 T 12-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Vc3S01_1890 9063163949e5f8b64709ba24d52a3d00 166 SUPERFAMILY SSF54364 2 73 2.09E-25 T 12-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Vc3S01_1890 9063163949e5f8b64709ba24d52a3d00 166 SUPERFAMILY SSF55200 78 166 6.02E-34 T 12-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 Vc3S01_1311 a46ad9a7ab45a5a10b501d761df9253a 164 SUPERFAMILY SSF55729 2 163 4.15E-27 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_1311 a46ad9a7ab45a5a10b501d761df9253a 164 Gene3D G3DSA:3.40.630.30 2 164 1.1E-40 T 12-10-2018 Vc3S01_1311 a46ad9a7ab45a5a10b501d761df9253a 164 Pfam PF13420 Acetyltransferase (GNAT) domain 3 158 3.8E-21 T 12-10-2018 Vc3S01_1603 5aad3a997ecd2cca6cd6acc28945747b 204 SUPERFAMILY SSF103088 55 182 2.62E-28 T 12-10-2018 IPR036737 OmpA-like domain superfamily Vc3S01_1603 5aad3a997ecd2cca6cd6acc28945747b 204 ProSitePatterns PS00018 EF-hand calcium-binding domain. 41 53 - T 12-10-2018 IPR018247 EF-Hand 1, calcium-binding site Vc3S01_1603 5aad3a997ecd2cca6cd6acc28945747b 204 Gene3D G3DSA:3.30.1330.60 58 188 3.2E-27 T 12-10-2018 IPR036737 OmpA-like domain superfamily Vc3S01_1603 5aad3a997ecd2cca6cd6acc28945747b 204 Pfam PF00691 OmpA family 83 178 1.1E-17 T 12-10-2018 IPR006665 OmpA-like domain Vc3S01_1603 5aad3a997ecd2cca6cd6acc28945747b 204 PRINTS PR01021 OMPA domain signature 84 106 4.1E-6 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Vc3S01_1603 5aad3a997ecd2cca6cd6acc28945747b 204 PRINTS PR01021 OMPA domain signature 129 145 4.1E-6 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Vc3S01_1603 5aad3a997ecd2cca6cd6acc28945747b 204 PRINTS PR01021 OMPA domain signature 114 129 4.1E-6 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Vc3S01_0725 522b12dfb9f88d3807f4a85485693e88 719 Gene3D G3DSA:3.40.50.300 223 453 1.2E-74 T 12-10-2018 Vc3S01_0725 522b12dfb9f88d3807f4a85485693e88 719 SUPERFAMILY SSF52540 25 458 1.5E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0725 522b12dfb9f88d3807f4a85485693e88 719 Pfam PF13604 AAA domain 252 413 1.4E-30 T 12-10-2018 Vc3S01_0725 522b12dfb9f88d3807f4a85485693e88 719 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 23 717 2.3E-217 T 12-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 Vc3S01_0725 522b12dfb9f88d3807f4a85485693e88 719 Gene3D G3DSA:3.40.50.300 583 706 2.7E-25 T 12-10-2018 Vc3S01_0725 522b12dfb9f88d3807f4a85485693e88 719 Gene3D G3DSA:3.40.50.300 463 582 6.1E-28 T 12-10-2018 Vc3S01_0725 522b12dfb9f88d3807f4a85485693e88 719 SUPERFAMILY SSF52540 378 718 3.63E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0725 522b12dfb9f88d3807f4a85485693e88 719 Gene3D G3DSA:1.10.10.1020 18 138 1.7E-21 T 12-10-2018 Vc3S01_0725 522b12dfb9f88d3807f4a85485693e88 719 Pfam PF13538 UvrD-like helicase C-terminal domain 646 691 6.6E-14 T 12-10-2018 IPR027785 UvrD-like helicase C-terminal domain Vc3S01_0725 522b12dfb9f88d3807f4a85485693e88 719 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 32 715 50.218 T 12-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 Vc3S01_A0815 4c98403f59795409fe749311113ce6c3 399 TIGRFAM TIGR00016 ackA: acetate kinase 2 396 8.0E-144 T 12-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Vc3S01_A0815 4c98403f59795409fe749311113ce6c3 399 Hamap MF_00020 Acetate kinase [ackA]. 1 399 168.327 T 12-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Vc3S01_A0815 4c98403f59795409fe749311113ce6c3 399 Gene3D G3DSA:3.30.420.40 3 195 1.0E-66 T 12-10-2018 Vc3S01_A0815 4c98403f59795409fe749311113ce6c3 399 SUPERFAMILY SSF53067 158 398 9.5E-78 T 12-10-2018 Vc3S01_A0815 4c98403f59795409fe749311113ce6c3 399 Pfam PF00871 Acetokinase family 6 390 1.1E-141 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Vc3S01_A0815 4c98403f59795409fe749311113ce6c3 399 PRINTS PR00471 Acetate kinase family signature 299 312 1.4E-44 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Vc3S01_A0815 4c98403f59795409fe749311113ce6c3 399 PRINTS PR00471 Acetate kinase family signature 378 390 1.4E-44 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Vc3S01_A0815 4c98403f59795409fe749311113ce6c3 399 PRINTS PR00471 Acetate kinase family signature 6 17 1.4E-44 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Vc3S01_A0815 4c98403f59795409fe749311113ce6c3 399 PRINTS PR00471 Acetate kinase family signature 321 337 1.4E-44 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Vc3S01_A0815 4c98403f59795409fe749311113ce6c3 399 PRINTS PR00471 Acetate kinase family signature 203 224 1.4E-44 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Vc3S01_A0815 4c98403f59795409fe749311113ce6c3 399 PRINTS PR00471 Acetate kinase family signature 173 186 1.4E-44 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Vc3S01_A0815 4c98403f59795409fe749311113ce6c3 399 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 6 17 - T 12-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Vc3S01_A0815 4c98403f59795409fe749311113ce6c3 399 SUPERFAMILY SSF53067 5 196 6.8E-63 T 12-10-2018 Vc3S01_A0815 4c98403f59795409fe749311113ce6c3 399 Gene3D G3DSA:3.30.420.40 196 399 1.0E-71 T 12-10-2018 Vc3S01_A0815 4c98403f59795409fe749311113ce6c3 399 PIRSF PIRSF000722 2 399 3.1E-133 T 12-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Vc3S01_A0815 4c98403f59795409fe749311113ce6c3 399 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 203 220 - T 12-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Vc3S01_1837 7583d8829953f04e026410f990371b7b 227 SUPERFAMILY SSF52540 1 203 1.22E-38 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_1837 7583d8829953f04e026410f990371b7b 227 Pfam PF00005 ABC transporter 1 140 3.4E-16 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_1837 7583d8829953f04e026410f990371b7b 227 SMART SM00382 1 189 0.0025 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_1837 7583d8829953f04e026410f990371b7b 227 Gene3D G3DSA:3.40.50.300 1 226 7.1E-47 T 12-10-2018 Vc3S01_A0519 fafec2d0c25e877d2857471a52f22741 343 Gene3D G3DSA:3.90.180.10 18 337 1.8E-131 T 12-10-2018 Vc3S01_A0519 fafec2d0c25e877d2857471a52f22741 343 SUPERFAMILY SSF51735 125 304 1.37E-46 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_A0519 fafec2d0c25e877d2857471a52f22741 343 SMART SM00829 17 337 4.6E-6 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Vc3S01_A0519 fafec2d0c25e877d2857471a52f22741 343 Gene3D G3DSA:3.40.50.720 128 309 1.8E-131 T 12-10-2018 Vc3S01_A0519 fafec2d0c25e877d2857471a52f22741 343 Pfam PF00107 Zinc-binding dehydrogenase 159 287 1.7E-21 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Vc3S01_A0519 fafec2d0c25e877d2857471a52f22741 343 SUPERFAMILY SSF50129 4 144 6.21E-45 T 12-10-2018 IPR011032 GroES-like superfamily Vc3S01_A0519 fafec2d0c25e877d2857471a52f22741 343 SUPERFAMILY SSF50129 290 338 3.39E-6 T 12-10-2018 IPR011032 GroES-like superfamily Vc3S01_A0519 fafec2d0c25e877d2857471a52f22741 343 Pfam PF16884 N-terminal domain of oxidoreductase 7 114 5.9E-43 T 12-10-2018 Vc3S01_2499 37e650802c2aa3bd60abff92623497e6 553 Pfam PF00149 Calcineurin-like phosphoesterase 38 259 4.9E-22 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Vc3S01_2499 37e650802c2aa3bd60abff92623497e6 553 ProSitePatterns PS00785 5'-nucleotidase signature 1. 38 50 - T 12-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Vc3S01_2499 37e650802c2aa3bd60abff92623497e6 553 Gene3D G3DSA:3.60.21.10 30 365 1.2E-126 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like Vc3S01_2499 37e650802c2aa3bd60abff92623497e6 553 ProSitePatterns PS00786 5'-nucleotidase signature 2. 113 124 - T 12-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Vc3S01_2499 37e650802c2aa3bd60abff92623497e6 553 SUPERFAMILY SSF55816 366 542 6.41E-52 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Vc3S01_2499 37e650802c2aa3bd60abff92623497e6 553 Gene3D G3DSA:3.90.780.10 366 552 8.4E-59 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Vc3S01_2499 37e650802c2aa3bd60abff92623497e6 553 Pfam PF02872 5'-nucleotidase, C-terminal domain 367 512 2.8E-35 T 12-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Vc3S01_2499 37e650802c2aa3bd60abff92623497e6 553 PRINTS PR01607 Apyrase family signature 36 54 8.4E-52 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Vc3S01_2499 37e650802c2aa3bd60abff92623497e6 553 PRINTS PR01607 Apyrase family signature 242 265 8.4E-52 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Vc3S01_2499 37e650802c2aa3bd60abff92623497e6 553 PRINTS PR01607 Apyrase family signature 287 307 8.4E-52 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Vc3S01_2499 37e650802c2aa3bd60abff92623497e6 553 PRINTS PR01607 Apyrase family signature 487 506 8.4E-52 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Vc3S01_2499 37e650802c2aa3bd60abff92623497e6 553 PRINTS PR01607 Apyrase family signature 211 228 8.4E-52 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Vc3S01_2499 37e650802c2aa3bd60abff92623497e6 553 PRINTS PR01607 Apyrase family signature 420 443 8.4E-52 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Vc3S01_2499 37e650802c2aa3bd60abff92623497e6 553 SUPERFAMILY SSF56300 32 364 2.8E-96 T 12-10-2018 Vc3S01_3120 897770eb3a87f8d86f670547c182d729 441 Gene3D G3DSA:1.10.443.10 186 419 1.7E-20 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Vc3S01_3120 897770eb3a87f8d86f670547c182d729 441 Pfam PF00589 Phage integrase family 206 413 1.6E-9 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Vc3S01_3120 897770eb3a87f8d86f670547c182d729 441 SUPERFAMILY SSF56349 111 415 1.21E-17 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Vc3S01_3214 0c0836e6eaffa4c5f1d55c369690842a 257 SUPERFAMILY SSF52540 2 254 9.0E-67 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_3214 0c0836e6eaffa4c5f1d55c369690842a 257 Pfam PF13614 AAA domain 2 178 7.4E-62 T 12-10-2018 IPR025669 AAA domain Vc3S01_3214 0c0836e6eaffa4c5f1d55c369690842a 257 Gene3D G3DSA:3.40.50.300 1 255 2.0E-76 T 12-10-2018 Vc3S01_3214 0c0836e6eaffa4c5f1d55c369690842a 257 PIRSF PIRSF009320 88 251 2.4E-9 T 12-10-2018 Vc3S01_3214 0c0836e6eaffa4c5f1d55c369690842a 257 PIRSF PIRSF009320 2 71 7.3E-14 T 12-10-2018 Vc3S01_2929 ea556bcdd8ce79a533e221010cf20bb0 101 Pfam PF00253 Ribosomal protein S14p/S29e 48 100 1.3E-24 T 12-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_2929 ea556bcdd8ce79a533e221010cf20bb0 101 SUPERFAMILY SSF57716 2 101 9.27E-37 T 12-10-2018 Vc3S01_2929 ea556bcdd8ce79a533e221010cf20bb0 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 12-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_2929 ea556bcdd8ce79a533e221010cf20bb0 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 25.682 T 12-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid Vc3S01_2929 ea556bcdd8ce79a533e221010cf20bb0 101 Gene3D G3DSA:4.10.830.10 43 101 5.7E-23 T 12-10-2018 Vc3S01_3037 4dbdf91434af8bd8eb5018b8ec9f88db 693 Gene3D G3DSA:3.40.50.300 457 630 9.1E-53 T 12-10-2018 Vc3S01_3037 4dbdf91434af8bd8eb5018b8ec9f88db 693 Pfam PF00271 Helicase conserved C-terminal domain 480 588 5.9E-17 T 12-10-2018 IPR001650 Helicase, C-terminal Vc3S01_3037 4dbdf91434af8bd8eb5018b8ec9f88db 693 SUPERFAMILY SSF50249 9 174 2.23E-41 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Vc3S01_3037 4dbdf91434af8bd8eb5018b8ec9f88db 693 SMART SM00490 505 589 1.2E-21 T 12-10-2018 IPR001650 Helicase, C-terminal Vc3S01_3037 4dbdf91434af8bd8eb5018b8ec9f88db 693 SMART SM00487 265 459 3.7E-31 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Vc3S01_3037 4dbdf91434af8bd8eb5018b8ec9f88db 693 Pfam PF17191 RecG wedge domain 14 172 2.0E-21 T 12-10-2018 IPR033454 RecG, wedge domain Vc3S01_3037 4dbdf91434af8bd8eb5018b8ec9f88db 693 Gene3D G3DSA:2.40.50.140 47 140 2.1E-13 T 12-10-2018 Vc3S01_3037 4dbdf91434af8bd8eb5018b8ec9f88db 693 Gene3D G3DSA:1.10.150.20 3 41 5.5E-5 T 12-10-2018 Vc3S01_3037 4dbdf91434af8bd8eb5018b8ec9f88db 693 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 29 664 1.3E-238 T 12-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 Vc3S01_3037 4dbdf91434af8bd8eb5018b8ec9f88db 693 SUPERFAMILY SSF52540 292 653 2.61E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_3037 4dbdf91434af8bd8eb5018b8ec9f88db 693 Pfam PF00270 DEAD/DEAH box helicase 271 433 2.1E-19 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Vc3S01_3037 4dbdf91434af8bd8eb5018b8ec9f88db 693 SUPERFAMILY SSF52540 200 453 4.13E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_3037 4dbdf91434af8bd8eb5018b8ec9f88db 693 Gene3D G3DSA:3.40.50.300 208 450 3.6E-83 T 12-10-2018 Vc3S01_3157 afec9a6c87b9e2b564058eb52de3710d 1040 SUPERFAMILY SSF82693 41 130 1.65E-23 T 12-10-2018 Vc3S01_3157 afec9a6c87b9e2b564058eb52de3710d 1040 Gene3D G3DSA:3.30.2090.10 698 786 1.5E-288 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Vc3S01_3157 afec9a6c87b9e2b564058eb52de3710d 1040 SUPERFAMILY SSF82866 782 1008 9.42E-48 T 12-10-2018 Vc3S01_3157 afec9a6c87b9e2b564058eb52de3710d 1040 Pfam PF00873 AcrB/AcrD/AcrF family 4 1003 5.7E-278 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_3157 afec9a6c87b9e2b564058eb52de3710d 1040 SUPERFAMILY SSF82714 182 263 1.57E-15 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Vc3S01_3157 afec9a6c87b9e2b564058eb52de3710d 1040 Gene3D G3DSA:3.30.70.1430 555 647 1.5E-288 T 12-10-2018 Vc3S01_3157 afec9a6c87b9e2b564058eb52de3710d 1040 Gene3D G3DSA:3.30.2090.10 178 268 1.5E-288 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Vc3S01_3157 afec9a6c87b9e2b564058eb52de3710d 1040 SUPERFAMILY SSF82866 290 489 3.27E-47 T 12-10-2018 Vc3S01_3157 afec9a6c87b9e2b564058eb52de3710d 1040 SUPERFAMILY SSF82693 136 323 5.36E-22 T 12-10-2018 Vc3S01_3157 afec9a6c87b9e2b564058eb52de3710d 1040 Gene3D G3DSA:1.20.1640.10 501 1001 1.5E-288 T 12-10-2018 Vc3S01_3157 afec9a6c87b9e2b564058eb52de3710d 1040 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 2.1E-76 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_3157 afec9a6c87b9e2b564058eb52de3710d 1040 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 2.1E-76 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_3157 afec9a6c87b9e2b564058eb52de3710d 1040 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 2.1E-76 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_3157 afec9a6c87b9e2b564058eb52de3710d 1040 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 2.1E-76 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_3157 afec9a6c87b9e2b564058eb52de3710d 1040 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 2.1E-76 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_3157 afec9a6c87b9e2b564058eb52de3710d 1040 PRINTS PR00702 Acriflavin resistance protein family signature 603 617 2.1E-76 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_3157 afec9a6c87b9e2b564058eb52de3710d 1040 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 2.1E-76 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_3157 afec9a6c87b9e2b564058eb52de3710d 1040 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 2.1E-76 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_3157 afec9a6c87b9e2b564058eb52de3710d 1040 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 2.1E-76 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_3157 afec9a6c87b9e2b564058eb52de3710d 1040 Gene3D G3DSA:3.30.70.1440 648 843 1.5E-288 T 12-10-2018 Vc3S01_3157 afec9a6c87b9e2b564058eb52de3710d 1040 Gene3D G3DSA:3.30.70.1430 40 794 1.5E-288 T 12-10-2018 Vc3S01_3157 afec9a6c87b9e2b564058eb52de3710d 1040 Gene3D G3DSA:1.20.1640.10 10 500 1.5E-288 T 12-10-2018 Vc3S01_3157 afec9a6c87b9e2b564058eb52de3710d 1040 SUPERFAMILY SSF82714 701 783 8.63E-18 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Vc3S01_3157 afec9a6c87b9e2b564058eb52de3710d 1040 SUPERFAMILY SSF82693 553 650 1.67E-21 T 12-10-2018 Vc3S01_3157 afec9a6c87b9e2b564058eb52de3710d 1040 Gene3D G3DSA:3.30.70.1320 134 325 1.5E-288 T 12-10-2018 Vc3S01_2934 580cdffbfc77cf4dc978ab7b0d9205e9 63 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 12-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_2934 580cdffbfc77cf4dc978ab7b0d9205e9 63 SUPERFAMILY SSF46561 1 61 2.09E-23 T 12-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_2934 580cdffbfc77cf4dc978ab7b0d9205e9 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 19.306 T 12-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_2934 580cdffbfc77cf4dc978ab7b0d9205e9 63 Gene3D G3DSA:1.10.287.310 1 63 1.6E-31 T 12-10-2018 Vc3S01_2934 580cdffbfc77cf4dc978ab7b0d9205e9 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 7.4E-24 T 12-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_2934 580cdffbfc77cf4dc978ab7b0d9205e9 63 Pfam PF00831 Ribosomal L29 protein 4 60 1.8E-25 T 12-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_A1273 8a338bf350ceffd4afe34c9a46140918 384 SUPERFAMILY SSF141868 144 381 1.1E-72 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_A1273 8a338bf350ceffd4afe34c9a46140918 384 Gene3D G3DSA:3.40.50.2300 1 137 9.1E-22 T 12-10-2018 Vc3S01_A1273 8a338bf350ceffd4afe34c9a46140918 384 SUPERFAMILY SSF52172 4 131 2.28E-21 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_A1273 8a338bf350ceffd4afe34c9a46140918 384 SMART SM00448 5 121 8.6E-11 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A1273 8a338bf350ceffd4afe34c9a46140918 384 Pfam PF00563 EAL domain 147 374 2.2E-68 T 12-10-2018 IPR001633 EAL domain Vc3S01_A1273 8a338bf350ceffd4afe34c9a46140918 384 Pfam PF00072 Response regulator receiver domain 8 121 3.8E-19 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A1273 8a338bf350ceffd4afe34c9a46140918 384 SMART SM00052 137 379 3.2E-68 T 12-10-2018 IPR001633 EAL domain Vc3S01_A1273 8a338bf350ceffd4afe34c9a46140918 384 Gene3D G3DSA:3.20.20.450 138 382 3.4E-76 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_3136 3a9e1ecccc9a5cfa23378a03846a0722 173 Gene3D G3DSA:3.40.50.300 2 166 1.9E-66 T 12-10-2018 Vc3S01_3136 3a9e1ecccc9a5cfa23378a03846a0722 173 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 6 164 1.1E-64 T 12-10-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 Vc3S01_3136 3a9e1ecccc9a5cfa23378a03846a0722 173 Pfam PF01202 Shikimate kinase 13 132 2.1E-13 T 12-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 Vc3S01_3136 3a9e1ecccc9a5cfa23378a03846a0722 173 SUPERFAMILY SSF52540 4 163 9.46E-27 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_1978 f4b0764fee43eea6a4db8b30666a1470 92 SUPERFAMILY SSF50715 1 92 1.64E-27 T 12-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Vc3S01_1978 f4b0764fee43eea6a4db8b30666a1470 92 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 1 92 9.0E-38 T 12-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 Vc3S01_1978 f4b0764fee43eea6a4db8b30666a1470 92 Gene3D G3DSA:2.40.240.10 1 92 2.8E-33 T 12-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Vc3S01_1978 f4b0764fee43eea6a4db8b30666a1470 92 Pfam PF01386 Ribosomal L25p family 4 89 4.8E-22 T 12-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 Vc3S01_1978 f4b0764fee43eea6a4db8b30666a1470 92 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 1 92 26.293 T 12-10-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 Vc3S01_2336 ffef94dd185a70095fa74dffcf599666 220 Pfam PF02254 TrkA-N domain 8 123 8.1E-28 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Vc3S01_2336 ffef94dd185a70095fa74dffcf599666 220 SUPERFAMILY SSF51735 6 136 1.84E-34 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_2336 ffef94dd185a70095fa74dffcf599666 220 Pfam PF02080 TrkA-C domain 154 215 2.9E-8 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Vc3S01_2336 ffef94dd185a70095fa74dffcf599666 220 Gene3D G3DSA:3.30.70.1450 141 216 5.7E-14 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Vc3S01_2336 ffef94dd185a70095fa74dffcf599666 220 SUPERFAMILY SSF116726 134 215 1.31E-14 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Vc3S01_2336 ffef94dd185a70095fa74dffcf599666 220 Gene3D G3DSA:3.40.50.720 2 140 2.0E-34 T 12-10-2018 Vc3S01_2085 2697d6454724f249970db55e8f371094 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 9.1E-23 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Vc3S01_2085 2697d6454724f249970db55e8f371094 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 9.1E-23 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Vc3S01_2085 2697d6454724f249970db55e8f371094 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 9.1E-23 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Vc3S01_2085 2697d6454724f249970db55e8f371094 164 ProSitePatterns PS00519 AsnC-type HTH domain signature. 30 56 - T 12-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site Vc3S01_2085 2697d6454724f249970db55e8f371094 164 SUPERFAMILY SSF46785 12 70 2.36E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_2085 2697d6454724f249970db55e8f371094 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 12 59 6.2E-22 T 12-10-2018 Vc3S01_2085 2697d6454724f249970db55e8f371094 164 Pfam PF01037 Lrp/AsnC ligand binding domain 78 152 7.6E-24 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Vc3S01_2085 2697d6454724f249970db55e8f371094 164 Gene3D G3DSA:3.30.70.920 66 149 4.3E-24 T 12-10-2018 Vc3S01_2085 2697d6454724f249970db55e8f371094 164 Gene3D G3DSA:1.10.10.10 1 65 9.8E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_2085 2697d6454724f249970db55e8f371094 164 SMART SM00344 12 121 1.8E-55 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 Vc3S01_2085 2697d6454724f249970db55e8f371094 164 SUPERFAMILY SSF54909 74 158 4.69E-22 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel Vc3S01_A0188 0f6316c8a9ba728add33675ea75a5d24 815 SUPERFAMILY SSF53706 47 667 5.5E-163 T 12-10-2018 Vc3S01_A0188 0f6316c8a9ba728add33675ea75a5d24 815 Pfam PF00384 Molybdopterin oxidoreductase 86 555 1.2E-103 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Vc3S01_A0188 0f6316c8a9ba728add33675ea75a5d24 815 Pfam PF01568 Molydopterin dinucleotide binding domain 675 791 5.2E-25 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Vc3S01_A0188 0f6316c8a9ba728add33675ea75a5d24 815 Gene3D G3DSA:3.90.55.10 83 617 1.7E-214 T 12-10-2018 Vc3S01_A0188 0f6316c8a9ba728add33675ea75a5d24 815 Gene3D G3DSA:2.40.40.20 651 809 1.4E-45 T 12-10-2018 Vc3S01_A0188 0f6316c8a9ba728add33675ea75a5d24 815 Gene3D G3DSA:3.40.228.10 178 643 1.7E-214 T 12-10-2018 Vc3S01_A0188 0f6316c8a9ba728add33675ea75a5d24 815 Gene3D G3DSA:3.40.50.740 86 566 1.7E-214 T 12-10-2018 Vc3S01_A0188 0f6316c8a9ba728add33675ea75a5d24 815 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 498 515 - T 12-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 Vc3S01_A0188 0f6316c8a9ba728add33675ea75a5d24 815 TIGRFAM TIGR00509 bisC_fam: molybdopterin guanine dinucleotide-containing S/N-oxide reductases 43 813 0.0 T 12-10-2018 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase GO:0016491|GO:0055114 Vc3S01_A0188 0f6316c8a9ba728add33675ea75a5d24 815 SUPERFAMILY SSF50692 672 813 2.71E-41 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Vc3S01_A0188 0f6316c8a9ba728add33675ea75a5d24 815 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 4 27 7.2E-5 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Vc3S01_1985 7f6886ae829fff669b6066836683fddd 496 Pfam PF00916 Sulfate permease family 141 346 9.9E-32 T 12-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 Vc3S01_1985 7f6886ae829fff669b6066836683fddd 496 Pfam PF01740 STAS domain 400 486 1.1E-7 T 12-10-2018 IPR002645 STAS domain Vc3S01_1985 7f6886ae829fff669b6066836683fddd 496 SUPERFAMILY SSF52091 393 483 1.41E-12 T 12-10-2018 IPR036513 STAS domain superfamily Vc3S01_1985 7f6886ae829fff669b6066836683fddd 496 Gene3D G3DSA:3.30.750.24 386 484 4.0E-24 T 12-10-2018 IPR036513 STAS domain superfamily Vc3S01_A0924 d60c87f3b437bc714de423ac00ddb83e 450 SUPERFAMILY SSF53067 1 205 6.8E-25 T 12-10-2018 Vc3S01_A0924 d60c87f3b437bc714de423ac00ddb83e 450 Gene3D G3DSA:3.30.420.40 379 433 1.6E-11 T 12-10-2018 Vc3S01_A0924 d60c87f3b437bc714de423ac00ddb83e 450 Gene3D G3DSA:3.90.640.10 336 378 1.6E-11 T 12-10-2018 Vc3S01_A0924 d60c87f3b437bc714de423ac00ddb83e 450 SUPERFAMILY SSF53067 207 447 2.59E-33 T 12-10-2018 Vc3S01_A0924 d60c87f3b437bc714de423ac00ddb83e 450 Pfam PF00012 Hsp70 protein 129 259 3.6E-10 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Vc3S01_A0924 d60c87f3b437bc714de423ac00ddb83e 450 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 213 226 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Vc3S01_3196 518240b2e8b828e5c6941323c7800764 599 Gene3D G3DSA:3.50.30.80 407 559 4.0E-56 T 12-10-2018 Vc3S01_3196 518240b2e8b828e5c6941323c7800764 599 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 108 118 - T 12-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Vc3S01_3196 518240b2e8b828e5c6941323c7800764 599 SUPERFAMILY SSF143975 2 406 8.24E-135 T 12-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Vc3S01_3196 518240b2e8b828e5c6941323c7800764 599 Pfam PF00920 Dehydratase family 20 590 7.9E-222 T 12-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Vc3S01_3196 518240b2e8b828e5c6941323c7800764 599 SUPERFAMILY SSF52016 407 594 8.63E-62 T 12-10-2018 Vc3S01_3196 518240b2e8b828e5c6941323c7800764 599 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 495 506 - T 12-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Vc3S01_3196 518240b2e8b828e5c6941323c7800764 599 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 1 593 43.938 T 12-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Vc3S01_3196 518240b2e8b828e5c6941323c7800764 599 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 4 593 1.5E-268 T 12-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Vc3S01_0533 4bd9fba4c5efc79c21ccd38f6804b1e2 853 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 7 845 25.134 T 12-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 Vc3S01_0533 4bd9fba4c5efc79c21ccd38f6804b1e2 853 SUPERFAMILY SSF52540 566 797 4.71E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0533 4bd9fba4c5efc79c21ccd38f6804b1e2 853 Gene3D G3DSA:1.10.1420.10 266 558 2.7E-104 T 12-10-2018 Vc3S01_0533 4bd9fba4c5efc79c21ccd38f6804b1e2 853 Pfam PF01624 MutS domain I 8 119 4.6E-41 T 12-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 Vc3S01_0533 4bd9fba4c5efc79c21ccd38f6804b1e2 853 SUPERFAMILY SSF48334 267 564 2.88E-91 T 12-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily Vc3S01_0533 4bd9fba4c5efc79c21ccd38f6804b1e2 853 Gene3D G3DSA:3.30.420.110 127 261 7.5E-36 T 12-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 Vc3S01_0533 4bd9fba4c5efc79c21ccd38f6804b1e2 853 SUPERFAMILY SSF53150 114 266 2.09E-40 T 12-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 Vc3S01_0533 4bd9fba4c5efc79c21ccd38f6804b1e2 853 SUPERFAMILY SSF55271 4 113 6.15E-42 T 12-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 Vc3S01_0533 4bd9fba4c5efc79c21ccd38f6804b1e2 853 SMART SM00533 283 590 2.7E-107 T 12-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 Vc3S01_0533 4bd9fba4c5efc79c21ccd38f6804b1e2 853 Gene3D G3DSA:3.40.1170.10 1 121 7.6E-52 T 12-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 Vc3S01_0533 4bd9fba4c5efc79c21ccd38f6804b1e2 853 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 7 851 0.0 T 12-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 Vc3S01_0533 4bd9fba4c5efc79c21ccd38f6804b1e2 853 Pfam PF00488 MutS domain V 609 796 8.9E-87 T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Vc3S01_0533 4bd9fba4c5efc79c21ccd38f6804b1e2 853 Pfam PF05190 MutS family domain IV 427 517 1.3E-30 T 12-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 Vc3S01_0533 4bd9fba4c5efc79c21ccd38f6804b1e2 853 Gene3D G3DSA:3.40.50.300 567 848 2.6E-100 T 12-10-2018 Vc3S01_0533 4bd9fba4c5efc79c21ccd38f6804b1e2 853 Pfam PF05188 MutS domain II 128 253 2.8E-30 T 12-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 Vc3S01_0533 4bd9fba4c5efc79c21ccd38f6804b1e2 853 SMART SM00534 606 793 2.1E-119 T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Vc3S01_0533 4bd9fba4c5efc79c21ccd38f6804b1e2 853 Gene3D G3DSA:1.10.1420.10 386 502 2.7E-104 T 12-10-2018 Vc3S01_0533 4bd9fba4c5efc79c21ccd38f6804b1e2 853 Pfam PF05192 MutS domain III 269 558 1.7E-40 T 12-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 Vc3S01_0533 4bd9fba4c5efc79c21ccd38f6804b1e2 853 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 687 703 - T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Vc3S01_0533 4bd9fba4c5efc79c21ccd38f6804b1e2 853 PIRSF PIRSF037677 189 831 2.3E-129 T 12-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 Vc3S01_0533 4bd9fba4c5efc79c21ccd38f6804b1e2 853 PIRSF PIRSF037677 1 180 3.0E-26 T 12-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 Vc3S01_1278 32ccc1adfc5702266c11c9ff6c563a8e 566 Pfam PF00072 Response regulator receiver domain 451 558 2.3E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_1278 32ccc1adfc5702266c11c9ff6c563a8e 566 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 316 426 5.4E-29 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_1278 32ccc1adfc5702266c11c9ff6c563a8e 566 PRINTS PR00344 Bacterial sensor protein C-terminal signature 370 380 3.5E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_1278 32ccc1adfc5702266c11c9ff6c563a8e 566 PRINTS PR00344 Bacterial sensor protein C-terminal signature 352 366 3.5E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_1278 32ccc1adfc5702266c11c9ff6c563a8e 566 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 424 3.5E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_1278 32ccc1adfc5702266c11c9ff6c563a8e 566 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 405 3.5E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_1278 32ccc1adfc5702266c11c9ff6c563a8e 566 Gene3D G3DSA:3.30.565.10 268 430 5.9E-44 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_1278 32ccc1adfc5702266c11c9ff6c563a8e 566 SUPERFAMILY SSF52172 448 565 4.13E-32 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_1278 32ccc1adfc5702266c11c9ff6c563a8e 566 SUPERFAMILY SSF55874 258 427 9.95E-44 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_1278 32ccc1adfc5702266c11c9ff6c563a8e 566 Pfam PF00512 His Kinase A (phospho-acceptor) domain 206 269 4.8E-19 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_1278 32ccc1adfc5702266c11c9ff6c563a8e 566 SMART SM00388 204 269 6.0E-21 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_1278 32ccc1adfc5702266c11c9ff6c563a8e 566 SMART SM00448 449 560 5.0E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_1278 32ccc1adfc5702266c11c9ff6c563a8e 566 SMART SM00387 316 427 8.1E-37 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_1278 32ccc1adfc5702266c11c9ff6c563a8e 566 Gene3D G3DSA:1.10.287.130 182 267 8.1E-22 T 12-10-2018 Vc3S01_1278 32ccc1adfc5702266c11c9ff6c563a8e 566 Gene3D G3DSA:3.40.50.2300 443 565 7.1E-34 T 12-10-2018 Vc3S01_1278 32ccc1adfc5702266c11c9ff6c563a8e 566 SUPERFAMILY SSF47384 192 269 3.14E-19 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Vc3S01_2556 9c95595be45c71aefcf468e4f642a218 465 Pfam PF02926 THUMP domain 39 141 2.5E-23 T 12-10-2018 IPR004114 THUMP domain GO:0003723 Vc3S01_2556 9c95595be45c71aefcf468e4f642a218 465 SUPERFAMILY SSF143437 2 156 3.84E-41 T 12-10-2018 Vc3S01_2556 9c95595be45c71aefcf468e4f642a218 465 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 365 465 1.6E-42 T 12-10-2018 IPR026340 Thiazole biosynthesis domain GO:0052837 KEGG: 00730+2.8.1.4 Vc3S01_2556 9c95595be45c71aefcf468e4f642a218 465 SUPERFAMILY SSF52821 385 464 6.68E-12 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily Vc3S01_2556 9c95595be45c71aefcf468e4f642a218 465 Gene3D G3DSA:3.30.2130.30 1 157 3.7E-30 T 12-10-2018 Vc3S01_2556 9c95595be45c71aefcf468e4f642a218 465 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 1 359 3.5E-108 T 12-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 Vc3S01_2556 9c95595be45c71aefcf468e4f642a218 465 Gene3D G3DSA:3.40.250.10 381 465 6.3E-11 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily Vc3S01_2556 9c95595be45c71aefcf468e4f642a218 465 SUPERFAMILY SSF52402 157 355 5.73E-42 T 12-10-2018 Vc3S01_2556 9c95595be45c71aefcf468e4f642a218 465 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 465 216.462 T 12-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 Vc3S01_2556 9c95595be45c71aefcf468e4f642a218 465 Gene3D G3DSA:3.40.50.620 158 380 2.3E-51 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Vc3S01_2556 9c95595be45c71aefcf468e4f642a218 465 SMART SM00981 58 148 1.7E-25 T 12-10-2018 IPR004114 THUMP domain GO:0003723 Vc3S01_2556 9c95595be45c71aefcf468e4f642a218 465 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 158 352 3.3E-72 T 12-10-2018 IPR020536 Thil, AANH domain GO:0004810 KEGG: 00730+2.8.1.4 Vc3S01_A2030 5f054c362db679aed365bb207ca5ad95 1043 SUPERFAMILY SSF51730 190 532 7.45E-116 T 12-10-2018 IPR029041 FAD-linked oxidoreductase-like Vc3S01_A2030 5f054c362db679aed365bb207ca5ad95 1043 PIRSF PIRSF000197 3 1042 0.0 T 12-10-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 Vc3S01_A2030 5f054c362db679aed365bb207ca5ad95 1043 SUPERFAMILY SSF53720 552 1037 1.7E-126 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Vc3S01_A2030 5f054c362db679aed365bb207ca5ad95 1043 Gene3D G3DSA:3.40.605.10 548 1036 6.9E-149 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Vc3S01_A2030 5f054c362db679aed365bb207ca5ad95 1043 Gene3D G3DSA:3.20.20.220 150 525 1.1E-130 T 12-10-2018 Vc3S01_A2030 5f054c362db679aed365bb207ca5ad95 1043 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 526 1035 5.7E-246 T 12-10-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 Vc3S01_A2030 5f054c362db679aed365bb207ca5ad95 1043 Pfam PF00171 Aldehyde dehydrogenase family 585 1035 2.1E-118 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Vc3S01_A2030 5f054c362db679aed365bb207ca5ad95 1043 SUPERFAMILY SSF81935 17 188 6.15E-63 T 12-10-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 Vc3S01_A2030 5f054c362db679aed365bb207ca5ad95 1043 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 838 849 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 Vc3S01_A2030 5f054c362db679aed365bb207ca5ad95 1043 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 73 187 1.8E-45 T 12-10-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 Vc3S01_A2030 5f054c362db679aed365bb207ca5ad95 1043 Pfam PF01619 Proline dehydrogenase 197 490 4.7E-93 T 12-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 Vc3S01_A2030 5f054c362db679aed365bb207ca5ad95 1043 Gene3D G3DSA:3.40.309.10 813 1005 6.9E-149 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Vc3S01_0791 cf9ba2a8e396d725211b7762f82ecd46 143 SUPERFAMILY SSF54637 1 139 9.23E-49 T 12-10-2018 IPR029069 HotDog domain superfamily Vc3S01_0791 cf9ba2a8e396d725211b7762f82ecd46 143 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 1 142 36.602 T 12-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Vc3S01_0791 cf9ba2a8e396d725211b7762f82ecd46 143 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 1 139 8.9E-60 T 12-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Vc3S01_0791 cf9ba2a8e396d725211b7762f82ecd46 143 Pfam PF07977 FabA-like domain 10 134 5.3E-40 T 12-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Vc3S01_0791 cf9ba2a8e396d725211b7762f82ecd46 143 Gene3D G3DSA:3.10.129.10 1 143 9.2E-61 T 12-10-2018 Vc3S01_1210 a6b77d4c01067ddbf46aeda350f4bf40 188 PIRSF PIRSF005901 1 188 2.4E-59 T 12-10-2018 IPR020599 Translation elongation factor P/YeiP Vc3S01_1210 a6b77d4c01067ddbf46aeda350f4bf40 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 3.6E-13 T 12-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 Vc3S01_1210 a6b77d4c01067ddbf46aeda350f4bf40 188 Gene3D G3DSA:2.40.50.140 131 188 2.0E-19 T 12-10-2018 Vc3S01_1210 a6b77d4c01067ddbf46aeda350f4bf40 188 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 2 188 42.354 T 12-10-2018 IPR011897 Translation elongation factor P-like, YeiP Vc3S01_1210 a6b77d4c01067ddbf46aeda350f4bf40 188 Pfam PF09285 Elongation factor P, C-terminal 132 187 8.7E-19 T 12-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 Vc3S01_1210 a6b77d4c01067ddbf46aeda350f4bf40 188 SUPERFAMILY SSF50249 67 129 6.0E-12 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Vc3S01_1210 a6b77d4c01067ddbf46aeda350f4bf40 188 SMART SM01185 69 124 1.0E-14 T 12-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 Vc3S01_1210 a6b77d4c01067ddbf46aeda350f4bf40 188 SMART SM00841 132 187 3.1E-25 T 12-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 Vc3S01_1210 a6b77d4c01067ddbf46aeda350f4bf40 188 SUPERFAMILY SSF50249 132 188 1.88E-14 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Vc3S01_1210 a6b77d4c01067ddbf46aeda350f4bf40 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 62 1.4E-17 T 12-10-2018 IPR013185 Translation elongation factor, KOW-like Vc3S01_1210 a6b77d4c01067ddbf46aeda350f4bf40 188 Gene3D G3DSA:2.30.30.30 1 65 3.4E-15 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 Vc3S01_1210 a6b77d4c01067ddbf46aeda350f4bf40 188 ProSitePatterns PS01275 Elongation factor P signature. 153 172 - T 12-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site Vc3S01_1210 a6b77d4c01067ddbf46aeda350f4bf40 188 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 3 188 9.2E-90 T 12-10-2018 IPR011897 Translation elongation factor P-like, YeiP Vc3S01_1210 a6b77d4c01067ddbf46aeda350f4bf40 188 SUPERFAMILY SSF50104 1 65 9.63E-12 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily Vc3S01_1210 a6b77d4c01067ddbf46aeda350f4bf40 188 Gene3D G3DSA:2.40.50.140 67 130 3.9E-15 T 12-10-2018 Vc3S01_1753 77a71ae78ec7ff881995566e8527baa4 403 Gene3D G3DSA:2.60.120.10 16 287 2.2E-124 T 12-10-2018 IPR014710 RmlC-like jelly roll fold Vc3S01_1753 77a71ae78ec7ff881995566e8527baa4 403 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 10 397 3.7E-89 T 12-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Vc3S01_1753 77a71ae78ec7ff881995566e8527baa4 403 PRINTS PR00714 Phosphomannose isomerase type I signature 135 158 3.8E-61 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Vc3S01_1753 77a71ae78ec7ff881995566e8527baa4 403 PRINTS PR00714 Phosphomannose isomerase type I signature 248 267 3.8E-61 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Vc3S01_1753 77a71ae78ec7ff881995566e8527baa4 403 PRINTS PR00714 Phosphomannose isomerase type I signature 90 111 3.8E-61 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Vc3S01_1753 77a71ae78ec7ff881995566e8527baa4 403 PRINTS PR00714 Phosphomannose isomerase type I signature 286 305 3.8E-61 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Vc3S01_1753 77a71ae78ec7ff881995566e8527baa4 403 PRINTS PR00714 Phosphomannose isomerase type I signature 42 57 3.8E-61 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Vc3S01_1753 77a71ae78ec7ff881995566e8527baa4 403 PRINTS PR00714 Phosphomannose isomerase type I signature 14 32 3.8E-61 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Vc3S01_1753 77a71ae78ec7ff881995566e8527baa4 403 PRINTS PR00714 Phosphomannose isomerase type I signature 232 247 3.8E-61 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Vc3S01_1753 77a71ae78ec7ff881995566e8527baa4 403 PRINTS PR00714 Phosphomannose isomerase type I signature 267 286 3.8E-61 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Vc3S01_1753 77a71ae78ec7ff881995566e8527baa4 403 Gene3D G3DSA:1.10.441.10 159 312 2.2E-124 T 12-10-2018 Vc3S01_1753 77a71ae78ec7ff881995566e8527baa4 403 Gene3D G3DSA:2.60.120.10 313 395 2.2E-124 T 12-10-2018 IPR014710 RmlC-like jelly roll fold Vc3S01_1753 77a71ae78ec7ff881995566e8527baa4 403 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 135 143 - T 12-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Vc3S01_1753 77a71ae78ec7ff881995566e8527baa4 403 PIRSF PIRSF001480 8 403 5.6E-104 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Vc3S01_1753 77a71ae78ec7ff881995566e8527baa4 403 Pfam PF01238 Phosphomannose isomerase type I 12 363 1.9E-76 T 12-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Vc3S01_1753 77a71ae78ec7ff881995566e8527baa4 403 SUPERFAMILY SSF51182 10 388 1.37E-96 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily Vc3S01_0058 e3b34756860a0a4c14d0f9c2dfbd4b7c 375 Gene3D G3DSA:3.20.20.70 8 368 2.2E-107 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_0058 e3b34756860a0a4c14d0f9c2dfbd4b7c 375 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 3 371 2.1E-178 T 12-10-2018 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892 Vc3S01_0058 e3b34756860a0a4c14d0f9c2dfbd4b7c 375 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 256 362 3.1E-25 T 12-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Vc3S01_0058 e3b34756860a0a4c14d0f9c2dfbd4b7c 375 SMART SM00876 256 364 1.2E-34 T 12-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Vc3S01_0058 e3b34756860a0a4c14d0f9c2dfbd4b7c 375 SUPERFAMILY SSF102114 38 366 3.27E-56 T 12-10-2018 Vc3S01_0058 e3b34756860a0a4c14d0f9c2dfbd4b7c 375 Pfam PF04055 Radical SAM superfamily 81 222 3.4E-10 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Vc3S01_A1115 c67d62b7a5b8b5f992e5b9eb420db3d4 220 SUPERFAMILY SSF52172 4 116 5.41E-27 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_A1115 c67d62b7a5b8b5f992e5b9eb420db3d4 220 Pfam PF00072 Response regulator receiver domain 6 112 9.1E-17 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A1115 c67d62b7a5b8b5f992e5b9eb420db3d4 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 218 1.0E-23 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Vc3S01_A1115 c67d62b7a5b8b5f992e5b9eb420db3d4 220 SMART SM00448 3 111 1.5E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A1115 c67d62b7a5b8b5f992e5b9eb420db3d4 220 SMART SM00862 147 218 6.0E-27 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Vc3S01_A1115 c67d62b7a5b8b5f992e5b9eb420db3d4 220 Gene3D G3DSA:3.40.50.2300 1 117 1.6E-28 T 12-10-2018 Vc3S01_A1115 c67d62b7a5b8b5f992e5b9eb420db3d4 220 SUPERFAMILY SSF46894 125 218 3.4E-29 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Vc3S01_A1115 c67d62b7a5b8b5f992e5b9eb420db3d4 220 Gene3D G3DSA:1.10.10.10 118 220 1.1E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_0911 2ea404341afb6a36b8638ef54fce8bb0 383 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 116 263 1.1E-34 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 Vc3S01_0911 2ea404341afb6a36b8638ef54fce8bb0 383 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 12 291 1.1E-23 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 Vc3S01_0911 2ea404341afb6a36b8638ef54fce8bb0 383 Gene3D G3DSA:3.40.50.720 99 264 4.7E-113 T 12-10-2018 Vc3S01_0911 2ea404341afb6a36b8638ef54fce8bb0 383 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 7 364 45.157 T 12-10-2018 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00750+1.1.1.290 Vc3S01_0911 2ea404341afb6a36b8638ef54fce8bb0 383 Pfam PF11890 Domain of unknown function (DUF3410) 296 376 3.1E-27 T 12-10-2018 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00750+1.1.1.290 Vc3S01_0911 2ea404341afb6a36b8638ef54fce8bb0 383 Gene3D G3DSA:3.30.1370.170 300 383 3.7E-31 T 12-10-2018 IPR038251 PdxB, dimerisation domain superfamily KEGG: 00750+1.1.1.290 Vc3S01_0911 2ea404341afb6a36b8638ef54fce8bb0 383 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 204 220 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Vc3S01_0911 2ea404341afb6a36b8638ef54fce8bb0 383 SUPERFAMILY SSF52283 7 115 8.08E-23 T 12-10-2018 Vc3S01_0911 2ea404341afb6a36b8638ef54fce8bb0 383 SUPERFAMILY SSF51735 99 263 1.23E-34 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_0911 2ea404341afb6a36b8638ef54fce8bb0 383 Gene3D G3DSA:3.40.50.720 7 285 4.7E-113 T 12-10-2018 Vc3S01_2006 185546d44993104b927d2bb5c8f287f7 456 SUPERFAMILY SSF161070 1 437 3.27E-122 T 12-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 Vc3S01_2006 185546d44993104b927d2bb5c8f287f7 456 Pfam PF00209 Sodium:neurotransmitter symporter family 130 427 1.7E-32 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Vc3S01_2006 185546d44993104b927d2bb5c8f287f7 456 Pfam PF00209 Sodium:neurotransmitter symporter family 1 100 9.1E-17 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Vc3S01_2006 185546d44993104b927d2bb5c8f287f7 456 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 14 28 - T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Vc3S01_2110 684f852c70a262671e61ad2b18781fcb 1053 SUPERFAMILY SSF82714 722 809 4.71E-22 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Vc3S01_2110 684f852c70a262671e61ad2b18781fcb 1053 Gene3D G3DSA:3.30.70.1430 567 668 0.0 T 12-10-2018 Vc3S01_2110 684f852c70a262671e61ad2b18781fcb 1053 SUPERFAMILY SSF82866 831 1026 1.57E-41 T 12-10-2018 Vc3S01_2110 684f852c70a262671e61ad2b18781fcb 1053 SUPERFAMILY SSF82866 296 497 2.35E-48 T 12-10-2018 Vc3S01_2110 684f852c70a262671e61ad2b18781fcb 1053 Gene3D G3DSA:1.20.1640.10 513 1022 0.0 T 12-10-2018 Vc3S01_2110 684f852c70a262671e61ad2b18781fcb 1053 SUPERFAMILY SSF82714 182 272 2.88E-20 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Vc3S01_2110 684f852c70a262671e61ad2b18781fcb 1053 Gene3D G3DSA:3.30.70.1440 669 865 0.0 T 12-10-2018 Vc3S01_2110 684f852c70a262671e61ad2b18781fcb 1053 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 7.5E-108 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_2110 684f852c70a262671e61ad2b18781fcb 1053 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 7.5E-108 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_2110 684f852c70a262671e61ad2b18781fcb 1053 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 7.5E-108 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_2110 684f852c70a262671e61ad2b18781fcb 1053 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 7.5E-108 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_2110 684f852c70a262671e61ad2b18781fcb 1053 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 7.5E-108 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_2110 684f852c70a262671e61ad2b18781fcb 1053 PRINTS PR00702 Acriflavin resistance protein family signature 621 635 7.5E-108 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_2110 684f852c70a262671e61ad2b18781fcb 1053 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 7.5E-108 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_2110 684f852c70a262671e61ad2b18781fcb 1053 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 7.5E-108 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_2110 684f852c70a262671e61ad2b18781fcb 1053 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 7.5E-108 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_2110 684f852c70a262671e61ad2b18781fcb 1053 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1044 0.0 T 12-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 Vc3S01_2110 684f852c70a262671e61ad2b18781fcb 1053 Gene3D G3DSA:3.30.2090.10 721 809 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Vc3S01_2110 684f852c70a262671e61ad2b18781fcb 1053 Gene3D G3DSA:3.30.2090.10 179 275 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Vc3S01_2110 684f852c70a262671e61ad2b18781fcb 1053 SUPERFAMILY SSF82693 672 856 7.59E-28 T 12-10-2018 Vc3S01_2110 684f852c70a262671e61ad2b18781fcb 1053 SUPERFAMILY SSF82693 38 131 3.4E-24 T 12-10-2018 Vc3S01_2110 684f852c70a262671e61ad2b18781fcb 1053 SUPERFAMILY SSF82693 565 670 1.2E-31 T 12-10-2018 Vc3S01_2110 684f852c70a262671e61ad2b18781fcb 1053 Gene3D G3DSA:1.20.1640.10 8 512 0.0 T 12-10-2018 Vc3S01_2110 684f852c70a262671e61ad2b18781fcb 1053 SUPERFAMILY SSF82693 135 330 1.5E-23 T 12-10-2018 Vc3S01_2110 684f852c70a262671e61ad2b18781fcb 1053 Gene3D G3DSA:3.30.70.1320 133 332 0.0 T 12-10-2018 Vc3S01_2110 684f852c70a262671e61ad2b18781fcb 1053 Gene3D G3DSA:3.30.70.1430 38 817 0.0 T 12-10-2018 Vc3S01_2110 684f852c70a262671e61ad2b18781fcb 1053 Pfam PF00873 AcrB/AcrD/AcrF family 1 1025 0.0 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_3163 9024a2a4698b3a0334421d6742ce4528 170 Gene3D G3DSA:2.160.10.10 1 170 2.1E-52 T 12-10-2018 Vc3S01_3163 9024a2a4698b3a0334421d6742ce4528 170 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 83 116 2.8E-7 T 12-10-2018 IPR001451 Hexapeptide repeat Vc3S01_3163 9024a2a4698b3a0334421d6742ce4528 170 SUPERFAMILY SSF51161 2 162 7.21E-42 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily Vc3S01_A1551 6779549c86d9250fbccd64532d16a461 1059 SUPERFAMILY SSF82866 798 1037 3.66E-52 T 12-10-2018 Vc3S01_A1551 6779549c86d9250fbccd64532d16a461 1059 Gene3D G3DSA:3.30.70.1430 562 664 1.4E-274 T 12-10-2018 Vc3S01_A1551 6779549c86d9250fbccd64532d16a461 1059 SUPERFAMILY SSF82714 716 800 3.4E-18 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Vc3S01_A1551 6779549c86d9250fbccd64532d16a461 1059 SUPERFAMILY SSF82693 46 127 3.14E-20 T 12-10-2018 Vc3S01_A1551 6779549c86d9250fbccd64532d16a461 1059 Gene3D G3DSA:3.30.70.1430 42 812 1.4E-274 T 12-10-2018 Vc3S01_A1551 6779549c86d9250fbccd64532d16a461 1059 Gene3D G3DSA:1.20.1640.10 15 508 1.4E-274 T 12-10-2018 Vc3S01_A1551 6779549c86d9250fbccd64532d16a461 1059 SUPERFAMILY SSF82866 294 498 1.96E-42 T 12-10-2018 Vc3S01_A1551 6779549c86d9250fbccd64532d16a461 1059 Gene3D G3DSA:3.30.70.1320 135 328 1.4E-274 T 12-10-2018 Vc3S01_A1551 6779549c86d9250fbccd64532d16a461 1059 SUPERFAMILY SSF82714 185 269 3.27E-17 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Vc3S01_A1551 6779549c86d9250fbccd64532d16a461 1059 Gene3D G3DSA:3.30.2090.10 182 274 1.4E-274 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Vc3S01_A1551 6779549c86d9250fbccd64532d16a461 1059 Gene3D G3DSA:3.30.2090.10 716 804 1.4E-274 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Vc3S01_A1551 6779549c86d9250fbccd64532d16a461 1059 Pfam PF00873 AcrB/AcrD/AcrF family 5 1032 8.0E-247 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_A1551 6779549c86d9250fbccd64532d16a461 1059 SUPERFAMILY SSF82693 137 328 2.41E-22 T 12-10-2018 Vc3S01_A1551 6779549c86d9250fbccd64532d16a461 1059 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 1.0E-31 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_A1551 6779549c86d9250fbccd64532d16a461 1059 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 1.0E-31 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_A1551 6779549c86d9250fbccd64532d16a461 1059 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 1.0E-31 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_A1551 6779549c86d9250fbccd64532d16a461 1059 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 1.0E-31 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_A1551 6779549c86d9250fbccd64532d16a461 1059 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 1.0E-31 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_A1551 6779549c86d9250fbccd64532d16a461 1059 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 1.0E-31 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_A1551 6779549c86d9250fbccd64532d16a461 1059 PRINTS PR00702 Acriflavin resistance protein family signature 545 562 1.0E-31 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_A1551 6779549c86d9250fbccd64532d16a461 1059 Gene3D G3DSA:3.30.70.1440 665 862 1.4E-274 T 12-10-2018 Vc3S01_A1551 6779549c86d9250fbccd64532d16a461 1059 Gene3D G3DSA:1.20.1640.10 509 1030 1.4E-274 T 12-10-2018 Vc3S01_A1551 6779549c86d9250fbccd64532d16a461 1059 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1043 0.0 T 12-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 Vc3S01_0581 1505061f096644153219ce1d4df328f0 441 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 197 258 1.7E-22 T 12-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 Vc3S01_0581 1505061f096644153219ce1d4df328f0 441 Pfam PF12626 Polymerase A arginine-rich C-terminus 316 433 7.6E-38 T 12-10-2018 IPR025866 Polymerase A arginine-rich C-terminal domain Vc3S01_0581 1505061f096644153219ce1d4df328f0 441 Gene3D G3DSA:3.30.460.10 6 166 7.7E-64 T 12-10-2018 Vc3S01_0581 1505061f096644153219ce1d4df328f0 441 SUPERFAMILY SSF81891 168 405 9.94E-49 T 12-10-2018 Vc3S01_0581 1505061f096644153219ce1d4df328f0 441 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 2 440 37.613 T 12-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 Vc3S01_0581 1505061f096644153219ce1d4df328f0 441 Pfam PF01743 Poly A polymerase head domain 40 170 2.3E-39 T 12-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 Vc3S01_0581 1505061f096644153219ce1d4df328f0 441 Gene3D G3DSA:1.10.3090.10 168 418 5.6E-94 T 12-10-2018 Vc3S01_0581 1505061f096644153219ce1d4df328f0 441 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 9 440 6.6E-163 T 12-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 Vc3S01_0581 1505061f096644153219ce1d4df328f0 441 SUPERFAMILY SSF81301 12 167 3.16E-40 T 12-10-2018 Vc3S01_A2004 7cebf7a3f1cfd66558e42dd8d38f05ea 327 Gene3D G3DSA:3.40.190.170 30 327 8.6E-109 T 12-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily Vc3S01_A2004 7cebf7a3f1cfd66558e42dd8d38f05ea 327 SUPERFAMILY SSF53850 137 277 1.15E-9 T 12-10-2018 Vc3S01_A2004 7cebf7a3f1cfd66558e42dd8d38f05ea 327 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 32 285 3.5E-81 T 12-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 Vc3S01_A2004 7cebf7a3f1cfd66558e42dd8d38f05ea 327 PIRSF PIRSF006470 1 326 4.2E-95 T 12-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 Vc3S01_A2004 7cebf7a3f1cfd66558e42dd8d38f05ea 327 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 32 309 7.9E-89 T 12-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 Vc3S01_0537 a58a797d81e6786621a5bf27a1f797bc 860 Gene3D G3DSA:3.10.310.40 749 857 6.6E-33 T 12-10-2018 Vc3S01_0537 a58a797d81e6786621a5bf27a1f797bc 860 SMART SM00863 652 695 3.3E-21 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Vc3S01_0537 a58a797d81e6786621a5bf27a1f797bc 860 Pfam PF02272 DHHA1 domain 722 854 1.1E-27 T 12-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 Vc3S01_0537 a58a797d81e6786621a5bf27a1f797bc 860 SUPERFAMILY SSF55186 551 710 2.49E-53 T 12-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 Vc3S01_0537 a58a797d81e6786621a5bf27a1f797bc 860 Gene3D G3DSA:3.30.54.20 623 676 6.6E-50 T 12-10-2018 Vc3S01_0537 a58a797d81e6786621a5bf27a1f797bc 860 Gene3D G3DSA:3.30.980.10 562 696 6.6E-50 T 12-10-2018 Vc3S01_0537 a58a797d81e6786621a5bf27a1f797bc 860 SUPERFAMILY SSF50447 453 551 3.46E-18 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Vc3S01_0537 a58a797d81e6786621a5bf27a1f797bc 860 SUPERFAMILY SSF55681 3 254 1.64E-108 T 12-10-2018 Vc3S01_0537 a58a797d81e6786621a5bf27a1f797bc 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 4.6E-31 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Vc3S01_0537 a58a797d81e6786621a5bf27a1f797bc 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 208 219 4.6E-31 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Vc3S01_0537 a58a797d81e6786621a5bf27a1f797bc 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 281 297 4.6E-31 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Vc3S01_0537 a58a797d81e6786621a5bf27a1f797bc 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 235 248 4.6E-31 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Vc3S01_0537 a58a797d81e6786621a5bf27a1f797bc 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 305 318 4.6E-31 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Vc3S01_0537 a58a797d81e6786621a5bf27a1f797bc 860 Gene3D G3DSA:3.30.930.10 2 251 2.0E-120 T 12-10-2018 Vc3S01_0537 a58a797d81e6786621a5bf27a1f797bc 860 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 652 695 1.2E-17 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Vc3S01_0537 a58a797d81e6786621a5bf27a1f797bc 860 SUPERFAMILY SSF101353 255 462 2.48E-60 T 12-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 Vc3S01_0537 a58a797d81e6786621a5bf27a1f797bc 860 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 860 197.708 T 12-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 Vc3S01_0537 a58a797d81e6786621a5bf27a1f797bc 860 Pfam PF01411 tRNA synthetases class II (A) 7 555 1.1E-225 T 12-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 Vc3S01_0537 a58a797d81e6786621a5bf27a1f797bc 860 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 7 839 0.0 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Vc3S01_0537 a58a797d81e6786621a5bf27a1f797bc 860 Gene3D G3DSA:2.40.30.130 463 551 5.3E-10 T 12-10-2018 Vc3S01_1943 f0b55659df6109b7ca28c005448b0e53 646 SUPERFAMILY SSF52172 3 143 7.0E-7 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_1943 f0b55659df6109b7ca28c005448b0e53 646 Gene3D G3DSA:3.40.50.2300 1 135 1.1E-7 T 12-10-2018 Vc3S01_1943 f0b55659df6109b7ca28c005448b0e53 646 SUPERFAMILY SSF55874 482 640 3.27E-34 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_1943 f0b55659df6109b7ca28c005448b0e53 646 Pfam PF00027 Cyclic nucleotide-binding domain 202 289 1.2E-15 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain Vc3S01_1943 f0b55659df6109b7ca28c005448b0e53 646 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 530 640 2.1E-22 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_1943 f0b55659df6109b7ca28c005448b0e53 646 Gene3D G3DSA:2.60.120.10 136 318 7.8E-20 T 12-10-2018 IPR014710 RmlC-like jelly roll fold Vc3S01_1943 f0b55659df6109b7ca28c005448b0e53 646 SUPERFAMILY SSF47384 335 376 9.61E-7 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Vc3S01_1943 f0b55659df6109b7ca28c005448b0e53 646 SMART SM00387 528 641 4.6E-28 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_1943 f0b55659df6109b7ca28c005448b0e53 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 625 638 1.9E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_1943 f0b55659df6109b7ca28c005448b0e53 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 601 619 1.9E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_1943 f0b55659df6109b7ca28c005448b0e53 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 569 583 1.9E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_1943 f0b55659df6109b7ca28c005448b0e53 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 587 597 1.9E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_1943 f0b55659df6109b7ca28c005448b0e53 646 Pfam PF00512 His Kinase A (phospho-acceptor) domain 340 367 1.1E-6 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_1943 f0b55659df6109b7ca28c005448b0e53 646 Gene3D G3DSA:3.30.565.10 491 645 7.6E-38 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_1943 f0b55659df6109b7ca28c005448b0e53 646 SUPERFAMILY SSF51206 201 311 1.83E-19 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like Vc3S01_A0841 b3b9cff14adaeffc8afdd2395a22d753 387 Pfam PF00288 GHMP kinases N terminal domain 115 180 8.8E-11 T 12-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 Vc3S01_A0841 b3b9cff14adaeffc8afdd2395a22d753 387 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 122 133 - T 12-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 Vc3S01_A0841 b3b9cff14adaeffc8afdd2395a22d753 387 PRINTS PR00959 Mevalonate kinase family signature 26 50 3.5E-44 T 12-10-2018 Vc3S01_A0841 b3b9cff14adaeffc8afdd2395a22d753 387 PRINTS PR00959 Mevalonate kinase family signature 329 346 3.5E-44 T 12-10-2018 Vc3S01_A0841 b3b9cff14adaeffc8afdd2395a22d753 387 PRINTS PR00959 Mevalonate kinase family signature 120 142 3.5E-44 T 12-10-2018 Vc3S01_A0841 b3b9cff14adaeffc8afdd2395a22d753 387 PRINTS PR00959 Mevalonate kinase family signature 163 182 3.5E-44 T 12-10-2018 Vc3S01_A0841 b3b9cff14adaeffc8afdd2395a22d753 387 SUPERFAMILY SSF54211 2 204 1.97E-64 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Vc3S01_A0841 b3b9cff14adaeffc8afdd2395a22d753 387 TIGRFAM TIGR00131 gal_kin: galactokinase 6 381 5.6E-144 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 Vc3S01_A0841 b3b9cff14adaeffc8afdd2395a22d753 387 SUPERFAMILY SSF55060 205 382 7.02E-51 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Vc3S01_A0841 b3b9cff14adaeffc8afdd2395a22d753 387 PIRSF PIRSF000530 1 385 5.3E-125 T 12-10-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 Vc3S01_A0841 b3b9cff14adaeffc8afdd2395a22d753 387 ProSitePatterns PS00106 Galactokinase signature. 28 39 - T 12-10-2018 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 Vc3S01_A0841 b3b9cff14adaeffc8afdd2395a22d753 387 Pfam PF10509 Galactokinase galactose-binding signature 11 59 5.9E-22 T 12-10-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 Vc3S01_A0841 b3b9cff14adaeffc8afdd2395a22d753 387 Pfam PF08544 GHMP kinases C terminal 280 362 2.4E-9 T 12-10-2018 IPR013750 GHMP kinase, C-terminal domain Vc3S01_A0841 b3b9cff14adaeffc8afdd2395a22d753 387 PRINTS PR00473 Galactokinase signature 93 104 1.9E-29 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 Vc3S01_A0841 b3b9cff14adaeffc8afdd2395a22d753 387 PRINTS PR00473 Galactokinase signature 28 46 1.9E-29 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 Vc3S01_A0841 b3b9cff14adaeffc8afdd2395a22d753 387 PRINTS PR00473 Galactokinase signature 264 278 1.9E-29 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 Vc3S01_A0841 b3b9cff14adaeffc8afdd2395a22d753 387 PRINTS PR00473 Galactokinase signature 113 131 1.9E-29 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 Vc3S01_A0841 b3b9cff14adaeffc8afdd2395a22d753 387 Hamap MF_00246 Galactokinase [galK]. 26 382 43.392 T 12-10-2018 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 Vc3S01_A0841 b3b9cff14adaeffc8afdd2395a22d753 387 Gene3D G3DSA:3.30.230.10 23 202 3.2E-128 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Vc3S01_A0841 b3b9cff14adaeffc8afdd2395a22d753 387 Gene3D G3DSA:3.30.70.890 203 358 3.2E-128 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Vc3S01_1452 342dba542594e200312b924f5dd75c7d 718 SUPERFAMILY SSF51445 2 379 2.84E-104 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily Vc3S01_1452 342dba542594e200312b924f5dd75c7d 718 PRINTS PR00133 Glycosyl hydrolase family 3 signature 156 172 8.1E-21 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Vc3S01_1452 342dba542594e200312b924f5dd75c7d 718 PRINTS PR00133 Glycosyl hydrolase family 3 signature 263 281 8.1E-21 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Vc3S01_1452 342dba542594e200312b924f5dd75c7d 718 PRINTS PR00133 Glycosyl hydrolase family 3 signature 91 107 8.1E-21 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Vc3S01_1452 342dba542594e200312b924f5dd75c7d 718 PRINTS PR00133 Glycosyl hydrolase family 3 signature 193 209 8.1E-21 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Vc3S01_1452 342dba542594e200312b924f5dd75c7d 718 PRINTS PR00133 Glycosyl hydrolase family 3 signature 110 129 8.1E-21 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Vc3S01_1452 342dba542594e200312b924f5dd75c7d 718 Gene3D G3DSA:2.60.40.10 604 717 1.3E-26 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_1452 342dba542594e200312b924f5dd75c7d 718 SUPERFAMILY SSF52279 380 604 3.14E-52 T 12-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 Vc3S01_1452 342dba542594e200312b924f5dd75c7d 718 Gene3D G3DSA:3.40.50.1700 365 603 4.7E-70 T 12-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 Vc3S01_1452 342dba542594e200312b924f5dd75c7d 718 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 380 601 2.3E-51 T 12-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 Vc3S01_1452 342dba542594e200312b924f5dd75c7d 718 Gene3D G3DSA:3.20.20.300 11 363 2.1E-113 T 12-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 Vc3S01_1452 342dba542594e200312b924f5dd75c7d 718 SMART SM01217 638 707 7.7E-20 T 12-10-2018 IPR026891 Fibronectin type III-like domain Vc3S01_1452 342dba542594e200312b924f5dd75c7d 718 Pfam PF14310 Fibronectin type III-like domain 638 707 2.0E-14 T 12-10-2018 IPR026891 Fibronectin type III-like domain Vc3S01_1452 342dba542594e200312b924f5dd75c7d 718 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 23 340 2.4E-70 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Vc3S01_p40105 6f96db0a11041eb7f49ffe142a91694e 245 SUPERFAMILY SSF54427 102 242 1.18E-32 T 12-10-2018 IPR032710 NTF2-like domain superfamily Vc3S01_p40105 6f96db0a11041eb7f49ffe142a91694e 245 Pfam PF04335 VirB8 protein 32 242 2.2E-47 T 12-10-2018 IPR007430 Bacterial virulence protein VirB8 GO:0016020 Vc3S01_p40105 6f96db0a11041eb7f49ffe142a91694e 245 PIRSF PIRSF003299 15 243 2.4E-52 T 12-10-2018 IPR026264 Type IV secretion system protein VirB8/PtlE GO:0030255 Vc3S01_p40105 6f96db0a11041eb7f49ffe142a91694e 245 Gene3D G3DSA:3.10.450.230 99 244 1.1E-41 T 12-10-2018 Vc3S01_2555 b6900f9843566f79918524d55af2d2ef 306 SUPERFAMILY SSF46785 3 85 6.06E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_2555 b6900f9843566f79918524d55af2d2ef 306 Pfam PF03466 LysR substrate binding domain 91 291 2.3E-37 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_2555 b6900f9843566f79918524d55af2d2ef 306 Gene3D G3DSA:1.10.10.10 7 95 2.0E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_2555 b6900f9843566f79918524d55af2d2ef 306 Gene3D G3DSA:3.40.190.10 103 288 1.2E-58 T 12-10-2018 Vc3S01_2555 b6900f9843566f79918524d55af2d2ef 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 2.8E-20 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_2555 b6900f9843566f79918524d55af2d2ef 306 Gene3D G3DSA:3.40.190.10 163 261 1.2E-58 T 12-10-2018 Vc3S01_2555 b6900f9843566f79918524d55af2d2ef 306 SUPERFAMILY SSF53850 92 296 3.44E-38 T 12-10-2018 Vc3S01_2555 b6900f9843566f79918524d55af2d2ef 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.9E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_2555 b6900f9843566f79918524d55af2d2ef 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.9E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_2555 b6900f9843566f79918524d55af2d2ef 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.9E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_2590 29ebecfc98c579918c1f3c94fa329337 171 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 25 8.9E-9 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Vc3S01_2590 29ebecfc98c579918c1f3c94fa329337 171 PIRSF PIRSF024622 1 171 3.5E-78 T 12-10-2018 IPR016824 Tfp pilus assembly protein FimT Vc3S01_2590 29ebecfc98c579918c1f3c94fa329337 171 SUPERFAMILY SSF54523 5 148 1.33E-16 T 12-10-2018 Vc3S01_2590 29ebecfc98c579918c1f3c94fa329337 171 Gene3D G3DSA:3.30.700.10 5 164 2.0E-10 T 12-10-2018 Vc3S01_2590 29ebecfc98c579918c1f3c94fa329337 171 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 24 1.1E-7 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Vc3S01_2590 29ebecfc98c579918c1f3c94fa329337 171 Pfam PF12019 Type II transport protein GspH 41 136 7.9E-8 T 12-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 Vc3S01_2590 29ebecfc98c579918c1f3c94fa329337 171 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 3 23 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Vc3S01_2592 47564141940bc18f7ce5d1827147ee5e 382 Gene3D G3DSA:2.10.230.10 139 212 1.7E-25 T 12-10-2018 Vc3S01_2592 47564141940bc18f7ce5d1827147ee5e 382 Pfam PF01556 DnaJ C terminal domain 124 336 4.0E-45 T 12-10-2018 IPR002939 Chaperone DnaJ, C-terminal Vc3S01_2592 47564141940bc18f7ce5d1827147ee5e 382 SUPERFAMILY SSF46565 1 110 1.23E-35 T 12-10-2018 IPR036869 Chaperone J-domain superfamily Vc3S01_2592 47564141940bc18f7ce5d1827147ee5e 382 Pfam PF00226 DnaJ domain 5 67 6.4E-27 T 12-10-2018 IPR001623 DnaJ domain Vc3S01_2592 47564141940bc18f7ce5d1827147ee5e 382 Pfam PF00684 DnaJ central domain 150 210 3.3E-15 T 12-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 Vc3S01_2592 47564141940bc18f7ce5d1827147ee5e 382 SUPERFAMILY SSF57938 137 213 2.75E-23 T 12-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily Vc3S01_2592 47564141940bc18f7ce5d1827147ee5e 382 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 376 42.806 T 12-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 Vc3S01_2592 47564141940bc18f7ce5d1827147ee5e 382 Gene3D G3DSA:2.60.260.20 258 366 8.6E-29 T 12-10-2018 Vc3S01_2592 47564141940bc18f7ce5d1827147ee5e 382 Gene3D G3DSA:1.10.287.110 1 116 5.3E-36 T 12-10-2018 IPR036869 Chaperone J-domain superfamily Vc3S01_2592 47564141940bc18f7ce5d1827147ee5e 382 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 12-10-2018 IPR018253 DnaJ domain, conserved site Vc3S01_2592 47564141940bc18f7ce5d1827147ee5e 382 SMART SM00271 4 62 7.1E-31 T 12-10-2018 IPR001623 DnaJ domain Vc3S01_2592 47564141940bc18f7ce5d1827147ee5e 382 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 352 6.9E-140 T 12-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 Vc3S01_2592 47564141940bc18f7ce5d1827147ee5e 382 SUPERFAMILY SSF49493 117 264 4.19E-19 T 12-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 Vc3S01_2592 47564141940bc18f7ce5d1827147ee5e 382 PRINTS PR00625 DnaJ domain signature 42 62 4.5E-32 T 12-10-2018 IPR001623 DnaJ domain Vc3S01_2592 47564141940bc18f7ce5d1827147ee5e 382 PRINTS PR00625 DnaJ domain signature 62 81 4.5E-32 T 12-10-2018 IPR001623 DnaJ domain Vc3S01_2592 47564141940bc18f7ce5d1827147ee5e 382 PRINTS PR00625 DnaJ domain signature 25 40 4.5E-32 T 12-10-2018 IPR001623 DnaJ domain Vc3S01_2592 47564141940bc18f7ce5d1827147ee5e 382 PRINTS PR00625 DnaJ domain signature 7 25 4.5E-32 T 12-10-2018 IPR001623 DnaJ domain Vc3S01_2592 47564141940bc18f7ce5d1827147ee5e 382 SUPERFAMILY SSF49493 262 347 7.33E-23 T 12-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 Vc3S01_A1903 c28badafa18fc7d69de930bd572e9fc2 655 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 7 644 2.4E-200 T 12-10-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 Vc3S01_A1903 c28badafa18fc7d69de930bd572e9fc2 655 Gene3D G3DSA:2.60.40.10 4 115 4.5E-20 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_A1903 c28badafa18fc7d69de930bd572e9fc2 655 SUPERFAMILY SSF51011 556 648 1.98E-14 T 12-10-2018 Vc3S01_A1903 c28badafa18fc7d69de930bd572e9fc2 655 Gene3D G3DSA:2.60.40.1180 555 648 3.5E-7 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta Vc3S01_A1903 c28badafa18fc7d69de930bd572e9fc2 655 Pfam PF00128 Alpha amylase, catalytic domain 199 252 1.9E-5 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Vc3S01_A1903 c28badafa18fc7d69de930bd572e9fc2 655 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 10 87 2.0E-11 T 12-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 Vc3S01_A1903 c28badafa18fc7d69de930bd572e9fc2 655 SUPERFAMILY SSF51445 112 542 3.55E-98 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily Vc3S01_A1903 c28badafa18fc7d69de930bd572e9fc2 655 SUPERFAMILY SSF81296 7 124 1.26E-21 T 12-10-2018 IPR014756 Immunoglobulin E-set Vc3S01_A1903 c28badafa18fc7d69de930bd572e9fc2 655 Gene3D G3DSA:3.20.20.80 116 550 1.5E-142 T 12-10-2018 Vc3S01_A1903 c28badafa18fc7d69de930bd572e9fc2 655 SMART SM00642 145 539 1.4E-4 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Vc3S01_p30067 007ec93ddd24d354b1996872b3fe6e8b 191 Gene3D G3DSA:3.40.50.1390 4 131 1.3E-36 T 12-10-2018 Vc3S01_p30067 007ec93ddd24d354b1996872b3fe6e8b 191 SMART SM00857 5 142 4.0E-50 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Vc3S01_p30067 007ec93ddd24d354b1996872b3fe6e8b 191 SUPERFAMILY SSF46689 144 186 2.69E-5 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_p30067 007ec93ddd24d354b1996872b3fe6e8b 191 SUPERFAMILY SSF53041 5 141 7.98E-40 T 12-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 Vc3S01_p30067 007ec93ddd24d354b1996872b3fe6e8b 191 Pfam PF02796 Helix-turn-helix domain of resolvase 144 187 7.1E-10 T 12-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 Vc3S01_p30067 007ec93ddd24d354b1996872b3fe6e8b 191 ProSitePatterns PS00398 Site-specific recombinases signature 2. 61 73 - T 12-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 Vc3S01_p30067 007ec93ddd24d354b1996872b3fe6e8b 191 Pfam PF00239 Resolvase, N terminal domain 6 141 6.5E-41 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Vc3S01_0435 8e347426236b4230c7e3ce76c19d2e4c 406 Pfam PF02274 Amidinotransferase 18 403 3.9E-111 T 12-10-2018 Vc3S01_0435 8e347426236b4230c7e3ce76c19d2e4c 406 TIGRFAM TIGR01078 arcA: arginine deiminase 4 406 5.0E-173 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 Vc3S01_0435 8e347426236b4230c7e3ce76c19d2e4c 406 Hamap MF_00242 Arginine deiminase [arcA]. 1 406 45.313 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 Vc3S01_0435 8e347426236b4230c7e3ce76c19d2e4c 406 Gene3D G3DSA:1.10.3930.10 68 148 9.5E-148 T 12-10-2018 Vc3S01_0435 8e347426236b4230c7e3ce76c19d2e4c 406 PRINTS PR01466 Bacterial arginine deiminase signature 177 192 2.8E-44 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 Vc3S01_0435 8e347426236b4230c7e3ce76c19d2e4c 406 PRINTS PR01466 Bacterial arginine deiminase signature 149 167 2.8E-44 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 Vc3S01_0435 8e347426236b4230c7e3ce76c19d2e4c 406 PRINTS PR01466 Bacterial arginine deiminase signature 362 376 2.8E-44 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 Vc3S01_0435 8e347426236b4230c7e3ce76c19d2e4c 406 PRINTS PR01466 Bacterial arginine deiminase signature 385 403 2.8E-44 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 Vc3S01_0435 8e347426236b4230c7e3ce76c19d2e4c 406 PRINTS PR01466 Bacterial arginine deiminase signature 342 359 2.8E-44 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 Vc3S01_0435 8e347426236b4230c7e3ce76c19d2e4c 406 PRINTS PR01466 Bacterial arginine deiminase signature 2 22 2.8E-44 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 Vc3S01_0435 8e347426236b4230c7e3ce76c19d2e4c 406 PIRSF PIRSF006356 1 406 9.9E-157 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 Vc3S01_0435 8e347426236b4230c7e3ce76c19d2e4c 406 Gene3D G3DSA:3.75.10.10 6 403 9.5E-148 T 12-10-2018 Vc3S01_0435 8e347426236b4230c7e3ce76c19d2e4c 406 SUPERFAMILY SSF55909 1 406 4.71E-128 T 12-10-2018 Vc3S01_A1217 952e17033beffcc7ce1a1589a8fed896 159 Pfam PF05638 Type VI secretion system effector, Hcp 6 133 2.4E-28 T 12-10-2018 IPR008514 Type VI secretion system effector, Hcp Vc3S01_A1217 952e17033beffcc7ce1a1589a8fed896 159 SUPERFAMILY SSF141452 4 157 8.5E-36 T 12-10-2018 IPR036624 Hcp1-like superfamily Vc3S01_A1217 952e17033beffcc7ce1a1589a8fed896 159 Gene3D G3DSA:2.30.110.20 2 158 1.8E-33 T 12-10-2018 IPR036624 Hcp1-like superfamily Vc3S01_A0933 6d56a23f665df0bee88888ad43688196 413 Gene3D G3DSA:3.30.565.10 284 355 6.8E-13 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_A0933 6d56a23f665df0bee88888ad43688196 413 SUPERFAMILY SSF55874 295 400 1.92E-8 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_A0933 6d56a23f665df0bee88888ad43688196 413 Pfam PF00512 His Kinase A (phospho-acceptor) domain 222 283 5.5E-9 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_A0933 6d56a23f665df0bee88888ad43688196 413 SUPERFAMILY SSF47384 205 282 1.14E-11 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Vc3S01_A0933 6d56a23f665df0bee88888ad43688196 413 Gene3D G3DSA:1.10.287.130 228 283 6.8E-13 T 12-10-2018 Vc3S01_A0933 6d56a23f665df0bee88888ad43688196 413 SMART SM00388 220 286 7.7E-10 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_A1065 eed1ab02d9c80dcdba26aa6e523bcf66 301 Gene3D G3DSA:3.40.190.290 92 292 8.0E-35 T 12-10-2018 Vc3S01_A1065 eed1ab02d9c80dcdba26aa6e523bcf66 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.8E-20 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A1065 eed1ab02d9c80dcdba26aa6e523bcf66 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.2E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A1065 eed1ab02d9c80dcdba26aa6e523bcf66 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.2E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A1065 eed1ab02d9c80dcdba26aa6e523bcf66 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.2E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A1065 eed1ab02d9c80dcdba26aa6e523bcf66 301 Pfam PF03466 LysR substrate binding domain 90 284 2.2E-41 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_A1065 eed1ab02d9c80dcdba26aa6e523bcf66 301 SUPERFAMILY SSF46785 3 111 7.91E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A1065 eed1ab02d9c80dcdba26aa6e523bcf66 301 SUPERFAMILY SSF53850 90 285 1.52E-37 T 12-10-2018 Vc3S01_A1065 eed1ab02d9c80dcdba26aa6e523bcf66 301 Gene3D G3DSA:1.10.10.10 3 89 4.3E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_2810 64c460b118d40b6954b758f9da1de3dd 947 SUPERFAMILY SSF81593 290 439 2.59E-42 T 12-10-2018 Vc3S01_2810 64c460b118d40b6954b758f9da1de3dd 947 Gene3D G3DSA:3.30.460.100 565 814 1.1E-91 T 12-10-2018 Vc3S01_2810 64c460b118d40b6954b758f9da1de3dd 947 Gene3D G3DSA:1.20.120.1510 451 564 3.6E-33 T 12-10-2018 Vc3S01_2810 64c460b118d40b6954b758f9da1de3dd 947 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 30 944 19.256 T 12-10-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 Vc3S01_2810 64c460b118d40b6954b758f9da1de3dd 947 SUPERFAMILY SSF81593 818 946 3.3E-32 T 12-10-2018 Vc3S01_2810 64c460b118d40b6954b758f9da1de3dd 947 Pfam PF08335 GlnD PII-uridylyltransferase 300 439 3.3E-45 T 12-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 Vc3S01_2810 64c460b118d40b6954b758f9da1de3dd 947 Pfam PF08335 GlnD PII-uridylyltransferase 830 913 1.6E-7 T 12-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 Vc3S01_2810 64c460b118d40b6954b758f9da1de3dd 947 Gene3D G3DSA:3.30.460.10 114 287 7.9E-66 T 12-10-2018 Vc3S01_2810 64c460b118d40b6954b758f9da1de3dd 947 Gene3D G3DSA:1.10.4050.10 3 112 4.1E-12 T 12-10-2018 Vc3S01_2810 64c460b118d40b6954b758f9da1de3dd 947 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 556 807 1.5E-97 T 12-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 Vc3S01_2810 64c460b118d40b6954b758f9da1de3dd 947 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 33 279 4.3E-93 T 12-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 Vc3S01_2810 64c460b118d40b6954b758f9da1de3dd 947 Gene3D G3DSA:1.20.120.330 815 947 7.6E-43 T 12-10-2018 Vc3S01_2810 64c460b118d40b6954b758f9da1de3dd 947 SUPERFAMILY SSF81301 528 816 3.24E-88 T 12-10-2018 Vc3S01_2810 64c460b118d40b6954b758f9da1de3dd 947 Gene3D G3DSA:1.20.120.330 288 443 1.3E-54 T 12-10-2018 Vc3S01_2810 64c460b118d40b6954b758f9da1de3dd 947 SUPERFAMILY SSF81301 24 289 3.53E-87 T 12-10-2018 Vc3S01_2045 b3515a9f8736d44aea39df4836eeb5d3 319 Gene3D G3DSA:3.20.20.450 1 108 2.3E-15 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_2045 b3515a9f8736d44aea39df4836eeb5d3 319 Gene3D G3DSA:1.10.3210.10 109 315 1.9E-21 T 12-10-2018 Vc3S01_2045 b3515a9f8736d44aea39df4836eeb5d3 319 SUPERFAMILY SSF141868 1 108 2.35E-19 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_2045 b3515a9f8736d44aea39df4836eeb5d3 319 SUPERFAMILY SSF109604 96 315 3.45E-40 T 12-10-2018 Vc3S01_2045 b3515a9f8736d44aea39df4836eeb5d3 319 Pfam PF08668 HDOD domain 120 240 5.4E-13 T 12-10-2018 IPR013976 Metal-dependent hydrolase HDOD Vc3S01_2045 b3515a9f8736d44aea39df4836eeb5d3 319 Pfam PF00563 EAL domain 1 105 5.9E-12 T 12-10-2018 IPR001633 EAL domain Vc3S01_A1403 d94b74ed01f7f2b9d7e35675cabfccde 1200 Gene3D G3DSA:3.30.565.10 733 891 7.3E-44 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_A1403 d94b74ed01f7f2b9d7e35675cabfccde 1200 Gene3D G3DSA:3.40.50.2300 964 1109 2.3E-33 T 12-10-2018 Vc3S01_A1403 d94b74ed01f7f2b9d7e35675cabfccde 1200 SUPERFAMILY SSF52172 968 1099 3.84E-32 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_A1403 d94b74ed01f7f2b9d7e35675cabfccde 1200 SUPERFAMILY SSF53850 265 486 9.18E-13 T 12-10-2018 Vc3S01_A1403 d94b74ed01f7f2b9d7e35675cabfccde 1200 Pfam PF00512 His Kinase A (phospho-acceptor) domain 668 731 6.1E-18 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_A1403 d94b74ed01f7f2b9d7e35675cabfccde 1200 Gene3D G3DSA:1.10.287.130 639 730 1.5E-20 T 12-10-2018 Vc3S01_A1403 d94b74ed01f7f2b9d7e35675cabfccde 1200 Pfam PF01627 Hpt domain 1132 1193 4.9E-8 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Vc3S01_A1403 d94b74ed01f7f2b9d7e35675cabfccde 1200 SMART SM00388 667 732 3.1E-19 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_A1403 d94b74ed01f7f2b9d7e35675cabfccde 1200 Gene3D G3DSA:3.40.190.10 272 484 1.8E-13 T 12-10-2018 Vc3S01_A1403 d94b74ed01f7f2b9d7e35675cabfccde 1200 SMART SM00448 967 1087 2.2E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A1403 d94b74ed01f7f2b9d7e35675cabfccde 1200 SMART SM00073 1104 1194 0.0093 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Vc3S01_A1403 d94b74ed01f7f2b9d7e35675cabfccde 1200 Gene3D G3DSA:1.20.120.160 1110 1198 2.1E-5 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 Vc3S01_A1403 d94b74ed01f7f2b9d7e35675cabfccde 1200 SMART SM00062 37 256 0.005 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Vc3S01_A1403 d94b74ed01f7f2b9d7e35675cabfccde 1200 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 783 887 6.3E-29 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_A1403 d94b74ed01f7f2b9d7e35675cabfccde 1200 PRINTS PR00344 Bacterial sensor protein C-terminal signature 850 868 1.3E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_A1403 d94b74ed01f7f2b9d7e35675cabfccde 1200 PRINTS PR00344 Bacterial sensor protein C-terminal signature 833 843 1.3E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_A1403 d94b74ed01f7f2b9d7e35675cabfccde 1200 PRINTS PR00344 Bacterial sensor protein C-terminal signature 874 887 1.3E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_A1403 d94b74ed01f7f2b9d7e35675cabfccde 1200 PRINTS PR00344 Bacterial sensor protein C-terminal signature 815 829 1.3E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_A1403 d94b74ed01f7f2b9d7e35675cabfccde 1200 Pfam PF00072 Response regulator receiver domain 969 1085 2.3E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A1403 d94b74ed01f7f2b9d7e35675cabfccde 1200 SMART SM00387 779 890 1.4E-37 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_A1403 d94b74ed01f7f2b9d7e35675cabfccde 1200 SUPERFAMILY SSF47226 1096 1195 5.5E-11 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 Vc3S01_A1403 d94b74ed01f7f2b9d7e35675cabfccde 1200 SUPERFAMILY SSF53850 36 242 1.55E-20 T 12-10-2018 Vc3S01_A1403 d94b74ed01f7f2b9d7e35675cabfccde 1200 Gene3D G3DSA:3.40.190.10 122 214 4.4E-24 T 12-10-2018 Vc3S01_A1403 d94b74ed01f7f2b9d7e35675cabfccde 1200 Gene3D G3DSA:3.40.190.10 359 446 1.8E-13 T 12-10-2018 Vc3S01_A1403 d94b74ed01f7f2b9d7e35675cabfccde 1200 Gene3D G3DSA:3.40.190.10 30 246 4.4E-24 T 12-10-2018 Vc3S01_A1403 d94b74ed01f7f2b9d7e35675cabfccde 1200 SUPERFAMILY SSF55874 721 890 1.2E-43 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_A1403 d94b74ed01f7f2b9d7e35675cabfccde 1200 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 58 242 1.8E-19 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Vc3S01_A1403 d94b74ed01f7f2b9d7e35675cabfccde 1200 SUPERFAMILY SSF47384 654 733 2.35E-18 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Vc3S01_0621 ff347c46cb5cfa7920efe1af848d2070 157 SUPERFAMILY SSF46557 2 75 1.7E-24 T 12-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 Vc3S01_0621 ff347c46cb5cfa7920efe1af848d2070 157 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 31.616 T 12-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 Vc3S01_0621 ff347c46cb5cfa7920efe1af848d2070 157 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 82 156 4.1E-28 T 12-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 Vc3S01_0621 ff347c46cb5cfa7920efe1af848d2070 157 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 12-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 Vc3S01_0621 ff347c46cb5cfa7920efe1af848d2070 157 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 47 - T 12-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 Vc3S01_0621 ff347c46cb5cfa7920efe1af848d2070 157 Gene3D G3DSA:1.10.287.180 1 74 1.5E-24 T 12-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 Vc3S01_0621 ff347c46cb5cfa7920efe1af848d2070 157 Pfam PF03449 Transcription elongation factor, N-terminal 4 73 7.3E-24 T 12-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 Vc3S01_0621 ff347c46cb5cfa7920efe1af848d2070 157 Gene3D G3DSA:3.10.50.30 75 157 1.1E-30 T 12-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 Vc3S01_0621 ff347c46cb5cfa7920efe1af848d2070 157 SUPERFAMILY SSF54534 81 156 1.57E-24 T 12-10-2018 Vc3S01_0621 ff347c46cb5cfa7920efe1af848d2070 157 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 155 1.7E-53 T 12-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 Vc3S01_0621 ff347c46cb5cfa7920efe1af848d2070 157 PIRSF PIRSF006092 1 157 2.4E-47 T 12-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 Vc3S01_1520 845e170cf71332b41595d0a94819765c 405 SUPERFAMILY SSF46785 105 215 3.27E-14 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_1520 845e170cf71332b41595d0a94819765c 405 Gene3D G3DSA:3.40.190.10 270 372 4.3E-48 T 12-10-2018 Vc3S01_1520 845e170cf71332b41595d0a94819765c 405 Gene3D G3DSA:1.10.10.10 103 182 3.4E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_1520 845e170cf71332b41595d0a94819765c 405 Gene3D G3DSA:3.40.190.10 197 382 4.3E-48 T 12-10-2018 Vc3S01_1520 845e170cf71332b41595d0a94819765c 405 SUPERFAMILY SSF53850 196 398 1.09E-34 T 12-10-2018 Vc3S01_1520 845e170cf71332b41595d0a94819765c 405 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 108 165 3.4E-13 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_1520 845e170cf71332b41595d0a94819765c 405 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 4.6E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_1520 845e170cf71332b41595d0a94819765c 405 SUPERFAMILY SSF46785 2 82 5.23E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_1520 845e170cf71332b41595d0a94819765c 405 Gene3D G3DSA:1.10.10.10 5 95 1.9E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_1520 845e170cf71332b41595d0a94819765c 405 Pfam PF03466 LysR substrate binding domain 193 398 3.8E-30 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_1520 845e170cf71332b41595d0a94819765c 405 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 9.8E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_1520 845e170cf71332b41595d0a94819765c 405 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 9.8E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_1520 845e170cf71332b41595d0a94819765c 405 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 9.8E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A1121 fa7bcc3c8ca1bc139bb2cbca9218241c 414 Gene3D G3DSA:3.30.70.270 230 412 1.4E-45 T 12-10-2018 Vc3S01_A1121 fa7bcc3c8ca1bc139bb2cbca9218241c 414 SMART SM00267 227 412 3.5E-37 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A1121 fa7bcc3c8ca1bc139bb2cbca9218241c 414 Pfam PF00990 Diguanylate cyclase, GGDEF domain 238 347 4.3E-23 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A1121 fa7bcc3c8ca1bc139bb2cbca9218241c 414 Pfam PF00990 Diguanylate cyclase, GGDEF domain 363 407 2.2E-6 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A1121 fa7bcc3c8ca1bc139bb2cbca9218241c 414 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 236 344 6.2E-24 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A1121 fa7bcc3c8ca1bc139bb2cbca9218241c 414 SUPERFAMILY SSF55073 243 411 5.81E-34 T 12-10-2018 IPR029787 Nucleotide cyclase Vc3S01_1310 bc58dd9efa2a7ddbf9f180bf8cac6fe2 151 Pfam PF00293 NUDIX domain 13 129 1.6E-19 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Vc3S01_1310 bc58dd9efa2a7ddbf9f180bf8cac6fe2 151 PRINTS PR00502 NUDIX hydrolase family signature 55 70 2.5E-6 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Vc3S01_1310 bc58dd9efa2a7ddbf9f180bf8cac6fe2 151 PRINTS PR00502 NUDIX hydrolase family signature 41 55 2.5E-6 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Vc3S01_1310 bc58dd9efa2a7ddbf9f180bf8cac6fe2 151 SUPERFAMILY SSF55811 8 133 3.11E-26 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Vc3S01_1310 bc58dd9efa2a7ddbf9f180bf8cac6fe2 151 ProSitePatterns PS00893 Nudix box signature. 46 67 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Vc3S01_1310 bc58dd9efa2a7ddbf9f180bf8cac6fe2 151 Gene3D G3DSA:3.90.79.10 1 150 2.2E-35 T 12-10-2018 Vc3S01_0209 07957371e8a6792cce72c03c18cb8548 483 ProSitePatterns PS00163 Fumarate lyases signature. 330 339 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 Vc3S01_0209 07957371e8a6792cce72c03c18cb8548 483 PRINTS PR00149 Fumarate lyase superfamily signature 193 211 4.2E-26 T 12-10-2018 IPR000362 Fumarate lyase family Vc3S01_0209 07957371e8a6792cce72c03c18cb8548 483 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 4.2E-26 T 12-10-2018 IPR000362 Fumarate lyase family Vc3S01_0209 07957371e8a6792cce72c03c18cb8548 483 PRINTS PR00149 Fumarate lyase superfamily signature 330 346 4.2E-26 T 12-10-2018 IPR000362 Fumarate lyase family Vc3S01_0209 07957371e8a6792cce72c03c18cb8548 483 PRINTS PR00149 Fumarate lyase superfamily signature 284 311 4.2E-26 T 12-10-2018 IPR000362 Fumarate lyase family Vc3S01_0209 07957371e8a6792cce72c03c18cb8548 483 Pfam PF10415 Fumarase C C-terminus 421 473 3.4E-17 T 12-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Vc3S01_0209 07957371e8a6792cce72c03c18cb8548 483 Gene3D G3DSA:1.10.40.30 421 470 1.6E-28 T 12-10-2018 Vc3S01_0209 07957371e8a6792cce72c03c18cb8548 483 Gene3D G3DSA:1.20.200.10 153 420 5.6E-113 T 12-10-2018 Vc3S01_0209 07957371e8a6792cce72c03c18cb8548 483 SUPERFAMILY SSF48557 14 467 5.89E-144 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 Vc3S01_0209 07957371e8a6792cce72c03c18cb8548 483 Gene3D G3DSA:1.10.275.10 16 152 1.2E-58 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal Vc3S01_0209 07957371e8a6792cce72c03c18cb8548 483 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 16 482 4.4E-252 T 12-10-2018 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 Vc3S01_0209 07957371e8a6792cce72c03c18cb8548 483 Pfam PF00206 Lyase 23 355 1.1E-101 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal Vc3S01_0864 962b6c3f0f5094aa9d66ad90f84a1c1d 289 Pfam PF00813 FliP family 92 283 7.0E-79 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Vc3S01_0864 962b6c3f0f5094aa9d66ad90f84a1c1d 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 109 129 4.2E-66 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Vc3S01_0864 962b6c3f0f5094aa9d66ad90f84a1c1d 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 90 109 4.2E-66 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Vc3S01_0864 962b6c3f0f5094aa9d66ad90f84a1c1d 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 261 286 4.2E-66 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Vc3S01_0864 962b6c3f0f5094aa9d66ad90f84a1c1d 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 237 258 4.2E-66 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Vc3S01_0864 962b6c3f0f5094aa9d66ad90f84a1c1d 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 216 236 4.2E-66 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Vc3S01_0864 962b6c3f0f5094aa9d66ad90f84a1c1d 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 129 148 4.2E-66 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Vc3S01_0864 962b6c3f0f5094aa9d66ad90f84a1c1d 289 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 216 231 - T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Vc3S01_0864 962b6c3f0f5094aa9d66ad90f84a1c1d 289 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 92 287 6.2E-82 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Vc3S01_0864 962b6c3f0f5094aa9d66ad90f84a1c1d 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 209 221 2.5E-17 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Vc3S01_0864 962b6c3f0f5094aa9d66ad90f84a1c1d 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 277 287 2.5E-17 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Vc3S01_0864 962b6c3f0f5094aa9d66ad90f84a1c1d 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 188 200 2.5E-17 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Vc3S01_0864 962b6c3f0f5094aa9d66ad90f84a1c1d 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 148 160 2.5E-17 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Vc3S01_0864 962b6c3f0f5094aa9d66ad90f84a1c1d 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 160 174 2.5E-17 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Vc3S01_0864 962b6c3f0f5094aa9d66ad90f84a1c1d 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 88 97 2.5E-17 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Vc3S01_0864 962b6c3f0f5094aa9d66ad90f84a1c1d 289 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 264 276 - T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Vc3S01_1240 9b52371e6e774cc7badf1d64c400e8a5 460 SUPERFAMILY SSF46626 319 460 4.93E-24 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Vc3S01_1240 9b52371e6e774cc7badf1d64c400e8a5 460 PIRSF PIRSF028099 5 460 5.5E-184 T 12-10-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase Vc3S01_1240 9b52371e6e774cc7badf1d64c400e8a5 460 Gene3D G3DSA:1.10.760.10 318 460 1.7E-8 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Vc3S01_1240 9b52371e6e774cc7badf1d64c400e8a5 460 Pfam PF06537 Di-haem oxidoreductase, putative peroxidase 22 460 3.9E-144 T 12-10-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase Vc3S01_0760 2382d70e34c3a90d4de9787af5677007 846 SUPERFAMILY SSF51445 522 833 4.22E-47 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily Vc3S01_0760 2382d70e34c3a90d4de9787af5677007 846 Gene3D G3DSA:3.20.20.80 522 842 4.3E-76 T 12-10-2018 Vc3S01_0760 2382d70e34c3a90d4de9787af5677007 846 Pfam PF00704 Glycosyl hydrolases family 18 525 825 2.2E-24 T 12-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 Vc3S01_0760 2382d70e34c3a90d4de9787af5677007 846 SUPERFAMILY SSF51055 17 78 5.89E-14 T 12-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 Vc3S01_0760 2382d70e34c3a90d4de9787af5677007 846 SMART SM00495 28 74 6.5E-10 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 Vc3S01_0760 2382d70e34c3a90d4de9787af5677007 846 SMART SM00495 277 326 0.014 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 Vc3S01_0760 2382d70e34c3a90d4de9787af5677007 846 ProSitePatterns PS01095 Chitinases family 18 active site. 637 645 - T 12-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 Vc3S01_0760 2382d70e34c3a90d4de9787af5677007 846 SMART SM00636 523 825 4.3E-4 T 12-10-2018 IPR011583 Chitinase II GO:0008061 Vc3S01_0760 2382d70e34c3a90d4de9787af5677007 846 Gene3D G3DSA:2.60.40.10 429 521 4.5E-21 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_0760 2382d70e34c3a90d4de9787af5677007 846 Gene3D G3DSA:2.10.10.20 11 79 3.9E-12 T 12-10-2018 Vc3S01_0760 2382d70e34c3a90d4de9787af5677007 846 Gene3D G3DSA:2.60.40.10 179 271 6.2E-22 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_0760 2382d70e34c3a90d4de9787af5677007 846 Gene3D G3DSA:2.60.40.10 84 175 3.2E-20 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_0760 2382d70e34c3a90d4de9787af5677007 846 Gene3D G3DSA:2.60.40.10 335 427 5.4E-24 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_1721 e1d5f77badd16fdc22b7a061d1d708fd 700 Pfam PF02563 Polysaccharide biosynthesis/export protein 29 97 5.6E-10 T 12-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 Vc3S01_1721 e1d5f77badd16fdc22b7a061d1d708fd 700 Gene3D G3DSA:3.10.560.10 482 576 1.1E-16 T 12-10-2018 Vc3S01_1721 e1d5f77badd16fdc22b7a061d1d708fd 700 Gene3D G3DSA:3.10.560.10 386 473 9.9E-15 T 12-10-2018 Vc3S01_1721 e1d5f77badd16fdc22b7a061d1d708fd 700 Gene3D G3DSA:3.10.560.10 97 182 8.9E-14 T 12-10-2018 Vc3S01_1721 e1d5f77badd16fdc22b7a061d1d708fd 700 Gene3D G3DSA:3.10.560.10 289 378 1.8E-14 T 12-10-2018 Vc3S01_1721 e1d5f77badd16fdc22b7a061d1d708fd 700 Gene3D G3DSA:3.10.560.10 200 288 5.2E-17 T 12-10-2018 Vc3S01_1721 e1d5f77badd16fdc22b7a061d1d708fd 700 Gene3D G3DSA:3.10.560.10 580 671 3.0E-17 T 12-10-2018 Vc3S01_1721 e1d5f77badd16fdc22b7a061d1d708fd 700 Gene3D G3DSA:3.30.1950.10 27 96 6.1E-6 T 12-10-2018 Vc3S01_1721 e1d5f77badd16fdc22b7a061d1d708fd 700 Pfam PF10531 SLBB domain 590 632 2.0E-7 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Vc3S01_1721 e1d5f77badd16fdc22b7a061d1d708fd 700 Pfam PF10531 SLBB domain 105 151 1.3E-4 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Vc3S01_1721 e1d5f77badd16fdc22b7a061d1d708fd 700 Pfam PF10531 SLBB domain 396 446 2.0E-7 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Vc3S01_1721 e1d5f77badd16fdc22b7a061d1d708fd 700 Pfam PF10531 SLBB domain 495 538 7.6E-5 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Vc3S01_1721 e1d5f77badd16fdc22b7a061d1d708fd 700 Pfam PF10531 SLBB domain 212 253 7.5E-8 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Vc3S01_1721 e1d5f77badd16fdc22b7a061d1d708fd 700 Pfam PF10531 SLBB domain 299 351 1.3E-12 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Vc3S01_2756 9066cfac123b6baf6acbaa065dc6c79c 1487 SUPERFAMILY SSF51395 435 1191 1.74E-249 T 12-10-2018 Vc3S01_2756 9066cfac123b6baf6acbaa065dc6c79c 1487 Pfam PF01493 GXGXG motif 1236 1419 9.6E-74 T 12-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 Vc3S01_2756 9066cfac123b6baf6acbaa065dc6c79c 1487 Gene3D G3DSA:3.60.20.10 13 546 0.0 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Vc3S01_2756 9066cfac123b6baf6acbaa065dc6c79c 1487 Pfam PF00310 Glutamine amidotransferases class-II 13 426 7.3E-177 T 12-10-2018 IPR017932 Glutamine amidotransferase type 2 domain Vc3S01_2756 9066cfac123b6baf6acbaa065dc6c79c 1487 SUPERFAMILY SSF56235 13 429 7.72E-149 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Vc3S01_2756 9066cfac123b6baf6acbaa065dc6c79c 1487 Gene3D G3DSA:2.160.20.60 1200 1468 1.0E-101 T 12-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 Vc3S01_2756 9066cfac123b6baf6acbaa065dc6c79c 1487 SUPERFAMILY SSF69336 1214 1465 2.22E-87 T 12-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 Vc3S01_2756 9066cfac123b6baf6acbaa065dc6c79c 1487 Pfam PF04898 Glutamate synthase central domain 458 738 1.1E-101 T 12-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 Vc3S01_2756 9066cfac123b6baf6acbaa065dc6c79c 1487 Gene3D G3DSA:3.20.20.70 431 793 0.0 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_2756 9066cfac123b6baf6acbaa065dc6c79c 1487 Pfam PF01645 Conserved region in glutamate synthase 794 1157 2.3E-152 T 12-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 Vc3S01_2756 9066cfac123b6baf6acbaa065dc6c79c 1487 Gene3D G3DSA:3.20.20.70 484 1172 0.0 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_1251 543546ae49e7a06b5fe3ba2db1cd0b8c 451 PIRSF PIRSF037314 1 451 7.1E-188 T 12-10-2018 IPR017171 Signal transduction histidine kinase, MctS Vc3S01_1251 543546ae49e7a06b5fe3ba2db1cd0b8c 451 Gene3D G3DSA:3.30.450.20 28 203 1.1E-46 T 12-10-2018 Vc3S01_1251 543546ae49e7a06b5fe3ba2db1cd0b8c 451 Gene3D G3DSA:3.30.565.10 313 447 2.5E-30 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_1251 543546ae49e7a06b5fe3ba2db1cd0b8c 451 SUPERFAMILY SSF55874 322 443 3.01E-19 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_1251 543546ae49e7a06b5fe3ba2db1cd0b8c 451 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 356 446 2.3E-8 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_1251 543546ae49e7a06b5fe3ba2db1cd0b8c 451 SMART SM01049 42 133 2.5E-31 T 12-10-2018 IPR033480 Single Cache domain 2 Vc3S01_1251 543546ae49e7a06b5fe3ba2db1cd0b8c 451 Pfam PF17200 Single Cache domain 2 45 192 3.7E-41 T 12-10-2018 IPR033480 Single Cache domain 2 Vc3S01_1251 543546ae49e7a06b5fe3ba2db1cd0b8c 451 SMART SM00387 353 447 3.1E-7 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_1251 543546ae49e7a06b5fe3ba2db1cd0b8c 451 Pfam PF07730 Histidine kinase 250 315 6.9E-14 T 12-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Vc3S01_A1306 662cce25b0b0e3bb547bdb567f7f07e8 542 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 297 312 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Vc3S01_A1306 662cce25b0b0e3bb547bdb567f7f07e8 542 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 235 248 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Vc3S01_A1306 662cce25b0b0e3bb547bdb567f7f07e8 542 Gene3D G3DSA:3.40.50.300 197 382 7.1E-61 T 12-10-2018 Vc3S01_A1306 662cce25b0b0e3bb547bdb567f7f07e8 542 Pfam PF13185 GAF domain 26 148 1.5E-8 T 12-10-2018 IPR003018 GAF domain GO:0005515 Vc3S01_A1306 662cce25b0b0e3bb547bdb567f7f07e8 542 Gene3D G3DSA:3.30.450.40 2 196 7.9E-16 T 12-10-2018 IPR029016 GAF-like domain superfamily Vc3S01_A1306 662cce25b0b0e3bb547bdb567f7f07e8 542 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 425 434 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Vc3S01_A1306 662cce25b0b0e3bb547bdb567f7f07e8 542 SUPERFAMILY SSF55781 10 179 1.66E-14 T 12-10-2018 Vc3S01_A1306 662cce25b0b0e3bb547bdb567f7f07e8 542 Pfam PF02954 Bacterial regulatory protein, Fis family 498 536 7.7E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Vc3S01_A1306 662cce25b0b0e3bb547bdb567f7f07e8 542 Pfam PF00158 Sigma-54 interaction domain 213 377 3.1E-69 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Vc3S01_A1306 662cce25b0b0e3bb547bdb567f7f07e8 542 SUPERFAMILY SSF52540 214 450 3.08E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A1306 662cce25b0b0e3bb547bdb567f7f07e8 542 Gene3D G3DSA:1.10.10.60 472 540 5.1E-13 T 12-10-2018 Vc3S01_A1306 662cce25b0b0e3bb547bdb567f7f07e8 542 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 519 539 3.6E-5 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Vc3S01_A1306 662cce25b0b0e3bb547bdb567f7f07e8 542 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 502 519 3.6E-5 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Vc3S01_A1306 662cce25b0b0e3bb547bdb567f7f07e8 542 SUPERFAMILY SSF46689 489 539 1.22E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_A1306 662cce25b0b0e3bb547bdb567f7f07e8 542 SMART SM00382 231 378 5.0E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_A1306 662cce25b0b0e3bb547bdb567f7f07e8 542 Gene3D G3DSA:1.10.8.60 383 463 5.9E-21 T 12-10-2018 Vc3S01_2626 cbb3b5b4b84ae91c77c58eba6a45fc41 498 SUPERFAMILY SSF52540 4 164 2.68E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2626 cbb3b5b4b84ae91c77c58eba6a45fc41 498 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 385 464 5.6E-25 T 12-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like Vc3S01_2626 cbb3b5b4b84ae91c77c58eba6a45fc41 498 Gene3D G3DSA:3.30.300.20 385 467 7.0E-20 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta Vc3S01_2626 cbb3b5b4b84ae91c77c58eba6a45fc41 498 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 6.4E-10 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Vc3S01_2626 cbb3b5b4b84ae91c77c58eba6a45fc41 498 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 73 91 6.4E-10 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Vc3S01_2626 cbb3b5b4b84ae91c77c58eba6a45fc41 498 Hamap MF_00195 GTPase Der [der]. 2 468 39.161 T 12-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 Vc3S01_2626 cbb3b5b4b84ae91c77c58eba6a45fc41 498 Gene3D G3DSA:3.40.50.300 2 160 1.1E-42 T 12-10-2018 Vc3S01_2626 cbb3b5b4b84ae91c77c58eba6a45fc41 498 SMART SM00382 1 174 1.8 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_2626 cbb3b5b4b84ae91c77c58eba6a45fc41 498 SMART SM00382 208 355 0.1 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_2626 cbb3b5b4b84ae91c77c58eba6a45fc41 498 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 465 1.5E-177 T 12-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 Vc3S01_2626 cbb3b5b4b84ae91c77c58eba6a45fc41 498 PIRSF PIRSF006485 1 473 1.4E-178 T 12-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 Vc3S01_2626 cbb3b5b4b84ae91c77c58eba6a45fc41 498 Gene3D G3DSA:3.40.50.300 204 382 5.0E-50 T 12-10-2018 Vc3S01_2626 cbb3b5b4b84ae91c77c58eba6a45fc41 498 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 208 373 1.1E-25 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Vc3S01_2626 cbb3b5b4b84ae91c77c58eba6a45fc41 498 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 155 9.2E-22 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Vc3S01_2626 cbb3b5b4b84ae91c77c58eba6a45fc41 498 Pfam PF01926 50S ribosome-binding GTPase 5 120 1.0E-26 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Vc3S01_2626 cbb3b5b4b84ae91c77c58eba6a45fc41 498 Pfam PF01926 50S ribosome-binding GTPase 212 329 1.3E-24 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Vc3S01_2626 cbb3b5b4b84ae91c77c58eba6a45fc41 498 SUPERFAMILY SSF52540 140 471 4.36E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_1725 d1a47262e70472df194b66765f1c09c4 358 SUPERFAMILY SSF53756 23 353 8.07E-57 T 12-10-2018 Vc3S01_1725 d1a47262e70472df194b66765f1c09c4 358 Gene3D G3DSA:3.40.50.2000 181 339 6.5E-49 T 12-10-2018 Vc3S01_1725 d1a47262e70472df194b66765f1c09c4 358 Gene3D G3DSA:3.40.50.2000 26 345 6.5E-49 T 12-10-2018 Vc3S01_1725 d1a47262e70472df194b66765f1c09c4 358 Pfam PF13579 Glycosyl transferase 4-like domain 26 185 2.5E-18 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Vc3S01_1725 d1a47262e70472df194b66765f1c09c4 358 Pfam PF00534 Glycosyl transferases group 1 191 333 1.5E-23 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 Vc3S01_1078 4d150096f4fa123c171f2089afb66db4 686 Gene3D G3DSA:1.10.730.10 389 526 3.6E-34 T 12-10-2018 Vc3S01_1078 4d150096f4fa123c171f2089afb66db4 686 Pfam PF09334 tRNA synthetases class I (M) 9 396 3.3E-165 T 12-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Vc3S01_1078 4d150096f4fa123c171f2089afb66db4 686 Gene3D G3DSA:2.20.28.20 142 176 1.8E-161 T 12-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Vc3S01_1078 4d150096f4fa123c171f2089afb66db4 686 Pfam PF01588 Putative tRNA binding domain 591 683 6.4E-26 T 12-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 Vc3S01_1078 4d150096f4fa123c171f2089afb66db4 686 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 15 26 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Vc3S01_1078 4d150096f4fa123c171f2089afb66db4 686 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 554 685 3.5E-46 T 12-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Vc3S01_1078 4d150096f4fa123c171f2089afb66db4 686 SUPERFAMILY SSF47323 389 547 8.94E-45 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Vc3S01_1078 4d150096f4fa123c171f2089afb66db4 686 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 9 535 7.2E-201 T 12-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Vc3S01_1078 4d150096f4fa123c171f2089afb66db4 686 Hamap MF_00098 Methionine--tRNA ligase [metG]. 6 545 41.665 T 12-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Vc3S01_1078 4d150096f4fa123c171f2089afb66db4 686 SUPERFAMILY SSF50249 585 685 4.65E-32 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Vc3S01_1078 4d150096f4fa123c171f2089afb66db4 686 SUPERFAMILY SSF52374 4 387 1.56E-101 T 12-10-2018 Vc3S01_1078 4d150096f4fa123c171f2089afb66db4 686 PRINTS PR01041 Methionyl-tRNA synthetase signature 90 101 6.9E-25 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Vc3S01_1078 4d150096f4fa123c171f2089afb66db4 686 PRINTS PR01041 Methionyl-tRNA synthetase signature 251 262 6.9E-25 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Vc3S01_1078 4d150096f4fa123c171f2089afb66db4 686 PRINTS PR01041 Methionyl-tRNA synthetase signature 42 56 6.9E-25 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Vc3S01_1078 4d150096f4fa123c171f2089afb66db4 686 PRINTS PR01041 Methionyl-tRNA synthetase signature 291 306 6.9E-25 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Vc3S01_1078 4d150096f4fa123c171f2089afb66db4 686 PRINTS PR01041 Methionyl-tRNA synthetase signature 10 23 6.9E-25 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Vc3S01_1078 4d150096f4fa123c171f2089afb66db4 686 PRINTS PR01041 Methionyl-tRNA synthetase signature 384 395 6.9E-25 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Vc3S01_1078 4d150096f4fa123c171f2089afb66db4 686 Gene3D G3DSA:2.40.50.140 575 686 3.1E-34 T 12-10-2018 Vc3S01_1078 4d150096f4fa123c171f2089afb66db4 686 SUPERFAMILY SSF57770 142 176 5.62E-13 T 12-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Vc3S01_1078 4d150096f4fa123c171f2089afb66db4 686 Gene3D G3DSA:3.40.50.620 9 384 1.8E-161 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Vc3S01_1692 131f9a28fd1139007dd22517b9ce966c 483 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 179 192 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Vc3S01_1692 131f9a28fd1139007dd22517b9ce966c 483 Gene3D G3DSA:1.10.10.60 426 473 2.5E-13 T 12-10-2018 Vc3S01_1692 131f9a28fd1139007dd22517b9ce966c 483 SUPERFAMILY SSF52172 16 199 6.69E-39 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_1692 131f9a28fd1139007dd22517b9ce966c 483 SUPERFAMILY SSF52540 154 384 2.17E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_1692 131f9a28fd1139007dd22517b9ce966c 483 SUPERFAMILY SSF46689 426 475 1.97E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_1692 131f9a28fd1139007dd22517b9ce966c 483 SMART SM00382 175 321 3.0E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_1692 131f9a28fd1139007dd22517b9ce966c 483 Pfam PF00072 Response regulator receiver domain 18 127 3.3E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_1692 131f9a28fd1139007dd22517b9ce966c 483 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 367 376 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Vc3S01_1692 131f9a28fd1139007dd22517b9ce966c 483 Gene3D G3DSA:1.10.8.60 325 389 8.1E-18 T 12-10-2018 Vc3S01_1692 131f9a28fd1139007dd22517b9ce966c 483 Gene3D G3DSA:3.40.50.2300 16 143 2.1E-30 T 12-10-2018 Vc3S01_1692 131f9a28fd1139007dd22517b9ce966c 483 Gene3D G3DSA:3.40.50.300 144 324 2.2E-65 T 12-10-2018 Vc3S01_1692 131f9a28fd1139007dd22517b9ce966c 483 Pfam PF02954 Bacterial regulatory protein, Fis family 433 474 5.6E-9 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Vc3S01_1692 131f9a28fd1139007dd22517b9ce966c 483 SMART SM00448 16 127 2.5E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_1692 131f9a28fd1139007dd22517b9ce966c 483 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 240 255 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Vc3S01_1692 131f9a28fd1139007dd22517b9ce966c 483 Pfam PF00158 Sigma-54 interaction domain 155 321 1.9E-68 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Vc3S01_0193 7456d46054f32fa6feb988b5c0a43752 154 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 110 127 - T 12-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Vc3S01_0193 7456d46054f32fa6feb988b5c0a43752 154 Gene3D G3DSA:2.40.50.100 76 154 4.0E-32 T 12-10-2018 Vc3S01_0193 7456d46054f32fa6feb988b5c0a43752 154 Pfam PF00364 Biotin-requiring enzyme 79 153 8.1E-26 T 12-10-2018 IPR000089 Biotin/lipoyl attachment Vc3S01_0193 7456d46054f32fa6feb988b5c0a43752 154 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 154 4.7E-63 T 12-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 Vc3S01_0193 7456d46054f32fa6feb988b5c0a43752 154 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 100 114 9.9E-19 T 12-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 Vc3S01_0193 7456d46054f32fa6feb988b5c0a43752 154 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 83 96 9.9E-19 T 12-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 Vc3S01_0193 7456d46054f32fa6feb988b5c0a43752 154 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 115 128 9.9E-19 T 12-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 Vc3S01_0193 7456d46054f32fa6feb988b5c0a43752 154 SUPERFAMILY SSF51230 79 154 1.05E-26 T 12-10-2018 IPR011053 Single hybrid motif Vc3S01_2233 8a135910b713c4cc20f04bf12be15868 756 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 598 612 4.8E-36 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 Vc3S01_2233 8a135910b713c4cc20f04bf12be15868 756 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 494 512 4.8E-36 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 Vc3S01_2233 8a135910b713c4cc20f04bf12be15868 756 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 536 554 4.8E-36 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 Vc3S01_2233 8a135910b713c4cc20f04bf12be15868 756 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 565 583 4.8E-36 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 Vc3S01_2233 8a135910b713c4cc20f04bf12be15868 756 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 656 736 1.6E-23 T 12-10-2018 IPR019489 Clp ATPase, C-terminal Vc3S01_2233 8a135910b713c4cc20f04bf12be15868 756 SMART SM00382 490 657 2.7E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_2233 8a135910b713c4cc20f04bf12be15868 756 SMART SM00382 209 354 4.6E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_2233 8a135910b713c4cc20f04bf12be15868 756 Gene3D G3DSA:1.10.8.60 656 755 9.9E-31 T 12-10-2018 Vc3S01_2233 8a135910b713c4cc20f04bf12be15868 756 Gene3D G3DSA:3.40.50.300 160 353 2.1E-62 T 12-10-2018 Vc3S01_2233 8a135910b713c4cc20f04bf12be15868 756 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 9.1E-13 T 12-10-2018 IPR004176 Clp, N-terminal Vc3S01_2233 8a135910b713c4cc20f04bf12be15868 756 Gene3D G3DSA:1.10.1780.10 1 143 1.5E-42 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Vc3S01_2233 8a135910b713c4cc20f04bf12be15868 756 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 521 539 - T 12-10-2018 IPR028299 ClpA/B, conserved site 2 Vc3S01_2233 8a135910b713c4cc20f04bf12be15868 756 SUPERFAMILY SSF52540 440 747 5.22E-73 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2233 8a135910b713c4cc20f04bf12be15868 756 Gene3D G3DSA:3.40.50.300 442 655 2.6E-76 T 12-10-2018 Vc3S01_2233 8a135910b713c4cc20f04bf12be15868 756 SMART SM01086 656 745 2.2E-36 T 12-10-2018 IPR019489 Clp ATPase, C-terminal Vc3S01_2233 8a135910b713c4cc20f04bf12be15868 756 SUPERFAMILY SSF81923 1 142 8.24E-59 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Vc3S01_2233 8a135910b713c4cc20f04bf12be15868 756 SUPERFAMILY SSF52540 171 429 1.28E-64 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2233 8a135910b713c4cc20f04bf12be15868 756 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 214 327 9.3E-12 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Vc3S01_2233 8a135910b713c4cc20f04bf12be15868 756 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 305 317 - T 12-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 Vc3S01_2233 8a135910b713c4cc20f04bf12be15868 756 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 737 0.0 T 12-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 Vc3S01_2233 8a135910b713c4cc20f04bf12be15868 756 Gene3D G3DSA:1.10.8.60 354 441 2.1E-34 T 12-10-2018 Vc3S01_2233 8a135910b713c4cc20f04bf12be15868 756 Pfam PF07724 AAA domain (Cdc48 subfamily) 489 650 2.1E-47 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Vc3S01_1463 d358f9caeeca55225d7efc8cdfe1280c 253 Pfam PF13424 Tetratricopeptide repeat 120 184 3.5E-7 T 12-10-2018 Vc3S01_1463 d358f9caeeca55225d7efc8cdfe1280c 253 Gene3D G3DSA:1.25.40.10 49 253 7.5E-37 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_1463 d358f9caeeca55225d7efc8cdfe1280c 253 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 23 250 8.9E-80 T 12-10-2018 IPR013360 Pilus biogenesis/stability type IV, PilW Vc3S01_1463 d358f9caeeca55225d7efc8cdfe1280c 253 SUPERFAMILY SSF48452 51 212 1.74E-21 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_1463 d358f9caeeca55225d7efc8cdfe1280c 253 SMART SM00028 51 84 75.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_1463 d358f9caeeca55225d7efc8cdfe1280c 253 SMART SM00028 119 152 27.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_1463 d358f9caeeca55225d7efc8cdfe1280c 253 SMART SM00028 85 118 0.29 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_1463 d358f9caeeca55225d7efc8cdfe1280c 253 SMART SM00028 155 188 0.13 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_A1337 c92a41e56b6d407613ccb7ae92c3b718 512 Gene3D G3DSA:1.20.150.20 383 512 2.1E-46 T 12-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_A1337 c92a41e56b6d407613ccb7ae92c3b718 512 SUPERFAMILY SSF47917 383 509 1.54E-43 T 12-10-2018 Vc3S01_A1337 c92a41e56b6d407613ccb7ae92c3b718 512 Gene3D G3DSA:2.40.30.20 1 93 2.5E-28 T 12-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Vc3S01_A1337 c92a41e56b6d407613ccb7ae92c3b718 512 SUPERFAMILY SSF52540 96 381 5.88E-94 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A1337 c92a41e56b6d407613ccb7ae92c3b718 512 SUPERFAMILY SSF50615 10 94 8.63E-25 T 12-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Vc3S01_A1337 c92a41e56b6d407613ccb7ae92c3b718 512 Gene3D G3DSA:3.40.50.300 94 382 3.9E-130 T 12-10-2018 Vc3S01_A1337 c92a41e56b6d407613ccb7ae92c3b718 512 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 1.8E-72 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Vc3S01_A1337 c92a41e56b6d407613ccb7ae92c3b718 512 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 92 2.2E-13 T 12-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Vc3S01_A1337 c92a41e56b6d407613ccb7ae92c3b718 512 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Vc3S01_A1337 c92a41e56b6d407613ccb7ae92c3b718 512 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 1.1E-44 T 12-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_A1337 c92a41e56b6d407613ccb7ae92c3b718 512 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 509 2.4E-252 T 12-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_A1337 c92a41e56b6d407613ccb7ae92c3b718 512 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 49.855 T 12-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_A1055 e233d8b15b2e8af4aee5a6969dac6f1a 476 SUPERFAMILY SSF58104 165 474 2.62E-66 T 12-10-2018 Vc3S01_A1055 e233d8b15b2e8af4aee5a6969dac6f1a 476 Gene3D G3DSA:1.10.287.950 150 476 7.8E-65 T 12-10-2018 Vc3S01_A1055 e233d8b15b2e8af4aee5a6969dac6f1a 476 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 234 263 4.1E-25 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Vc3S01_A1055 e233d8b15b2e8af4aee5a6969dac6f1a 476 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 311 338 4.1E-25 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Vc3S01_A1055 e233d8b15b2e8af4aee5a6969dac6f1a 476 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 340 369 4.1E-25 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Vc3S01_A1055 e233d8b15b2e8af4aee5a6969dac6f1a 476 SMART SM00283 213 474 2.6E-51 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Vc3S01_A1055 e233d8b15b2e8af4aee5a6969dac6f1a 476 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 287 439 1.7E-38 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Vc3S01_A2055 128e543cf75536db78d39bf04649655c 559 Pfam PF03961 Flagellar Assembly Protein A 81 545 1.6E-120 T 12-10-2018 IPR005646 Flagellar assembly protein A Vc3S01_2503 365fbe0348516afccd85407e45f3a0cf 285 Pfam PF13847 Methyltransferase domain 117 252 4.1E-18 T 12-10-2018 IPR025714 Methyltransferase domain Vc3S01_2503 365fbe0348516afccd85407e45f3a0cf 285 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 6 283 1.2E-81 T 12-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 Vc3S01_2503 365fbe0348516afccd85407e45f3a0cf 285 Gene3D G3DSA:3.40.50.150 91 283 4.0E-58 T 12-10-2018 Vc3S01_2503 365fbe0348516afccd85407e45f3a0cf 285 Gene3D G3DSA:1.10.8.10 6 90 5.2E-26 T 12-10-2018 Vc3S01_2503 365fbe0348516afccd85407e45f3a0cf 285 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 187 193 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Vc3S01_2503 365fbe0348516afccd85407e45f3a0cf 285 SUPERFAMILY SSF53335 7 279 3.78E-57 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Vc3S01_2503 365fbe0348516afccd85407e45f3a0cf 285 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 29 278 6.0E-93 T 12-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 Vc3S01_2503 365fbe0348516afccd85407e45f3a0cf 285 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 7 282 45.217 T 12-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 Vc3S01_1565 f152ca5c2259b136f9ae52d0fae9ba9f 1070 SMART SM00062 314 531 2.3E-6 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Vc3S01_1565 f152ca5c2259b136f9ae52d0fae9ba9f 1070 Gene3D G3DSA:3.40.190.10 397 490 6.0E-35 T 12-10-2018 Vc3S01_1565 f152ca5c2259b136f9ae52d0fae9ba9f 1070 Gene3D G3DSA:3.40.190.10 315 527 6.0E-35 T 12-10-2018 Vc3S01_1565 f152ca5c2259b136f9ae52d0fae9ba9f 1070 Gene3D G3DSA:1.10.287.130 623 686 1.3E-5 T 12-10-2018 Vc3S01_1565 f152ca5c2259b136f9ae52d0fae9ba9f 1070 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 320 529 8.2E-19 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Vc3S01_1565 f152ca5c2259b136f9ae52d0fae9ba9f 1070 SUPERFAMILY SSF109604 925 1022 8.17E-7 T 12-10-2018 Vc3S01_1565 f152ca5c2259b136f9ae52d0fae9ba9f 1070 SUPERFAMILY SSF53850 316 529 4.89E-24 T 12-10-2018 Vc3S01_1565 f152ca5c2259b136f9ae52d0fae9ba9f 1070 Pfam PF13487 HD domain 924 989 7.6E-19 T 12-10-2018 Vc3S01_1565 f152ca5c2259b136f9ae52d0fae9ba9f 1070 Gene3D G3DSA:1.10.3210.10 903 1047 1.6E-22 T 12-10-2018 Vc3S01_1565 f152ca5c2259b136f9ae52d0fae9ba9f 1070 SMART SM00471 696 1007 0.0013 T 12-10-2018 IPR003607 HD/PDEase domain Vc3S01_1565 f152ca5c2259b136f9ae52d0fae9ba9f 1070 SUPERFAMILY SSF109604 691 774 5.71E-8 T 12-10-2018 Vc3S01_1565 f152ca5c2259b136f9ae52d0fae9ba9f 1070 Gene3D G3DSA:1.10.3210.10 687 796 3.1E-18 T 12-10-2018 Vc3S01_1639 74d3f8bb89952ea28132df011723bacc 639 SUPERFAMILY SSF52540 310 517 2.47E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_1639 74d3f8bb89952ea28132df011723bacc 639 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_1639 74d3f8bb89952ea28132df011723bacc 639 Pfam PF12848 ABC transporter 224 297 1.4E-11 T 12-10-2018 IPR032781 ABC-transporter extension domain Vc3S01_1639 74d3f8bb89952ea28132df011723bacc 639 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_1639 74d3f8bb89952ea28132df011723bacc 639 SMART SM00382 344 514 1.2E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_1639 74d3f8bb89952ea28132df011723bacc 639 SMART SM00382 28 230 7.0E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_1639 74d3f8bb89952ea28132df011723bacc 639 SUPERFAMILY SSF52540 3 245 6.64E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_1639 74d3f8bb89952ea28132df011723bacc 639 Pfam PF00005 ABC transporter 19 185 5.7E-24 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_1639 74d3f8bb89952ea28132df011723bacc 639 Gene3D G3DSA:3.40.50.300 4 279 3.5E-69 T 12-10-2018 Vc3S01_1639 74d3f8bb89952ea28132df011723bacc 639 Gene3D G3DSA:1.10.287.380 555 638 1.1E-28 T 12-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 Vc3S01_1639 74d3f8bb89952ea28132df011723bacc 639 Pfam PF16326 ABC transporter C-terminal domain 565 633 1.6E-21 T 12-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 Vc3S01_1639 74d3f8bb89952ea28132df011723bacc 639 Gene3D G3DSA:3.40.50.300 281 551 2.0E-67 T 12-10-2018 Vc3S01_1639 74d3f8bb89952ea28132df011723bacc 639 Pfam PF00005 ABC transporter 336 469 7.5E-24 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_0767 46b9090f91d0b9e031e0f4cee37ec74f 86 SUPERFAMILY SSF143800 1 81 1.8E-23 T 12-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_0767 46b9090f91d0b9e031e0f4cee37ec74f 86 Gene3D G3DSA:2.30.170.50 1 84 8.6E-25 T 12-10-2018 Vc3S01_0767 46b9090f91d0b9e031e0f4cee37ec74f 86 Pfam PF01197 Ribosomal protein L31 1 79 8.9E-28 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_0767 46b9090f91d0b9e031e0f4cee37ec74f 86 ProSitePatterns PS01143 Ribosomal protein L31 signature. 49 70 - T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_0767 46b9090f91d0b9e031e0f4cee37ec74f 86 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 81 29.787 T 12-10-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_0767 46b9090f91d0b9e031e0f4cee37ec74f 86 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 80 9.8E-19 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_0767 46b9090f91d0b9e031e0f4cee37ec74f 86 PRINTS PR01249 Ribosomal protein L31 signature 2 19 4.7E-17 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_0767 46b9090f91d0b9e031e0f4cee37ec74f 86 PRINTS PR01249 Ribosomal protein L31 signature 60 78 4.7E-17 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_0767 46b9090f91d0b9e031e0f4cee37ec74f 86 PRINTS PR01249 Ribosomal protein L31 signature 45 60 4.7E-17 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_2504 fb33a53d95399da070e45ac720096ff9 362 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 230 246 - T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Vc3S01_2504 fb33a53d95399da070e45ac720096ff9 362 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 359 40.988 T 12-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 Vc3S01_2504 fb33a53d95399da070e45ac720096ff9 362 SUPERFAMILY SSF75620 12 355 3.66E-137 T 12-10-2018 Vc3S01_2504 fb33a53d95399da070e45ac720096ff9 362 Pfam PF00472 RF-1 domain 218 323 9.9E-39 T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Vc3S01_2504 fb33a53d95399da070e45ac720096ff9 362 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 360 6.8E-171 T 12-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 Vc3S01_2504 fb33a53d95399da070e45ac720096ff9 362 Gene3D G3DSA:3.30.160.20 212 293 3.1E-95 T 12-10-2018 Vc3S01_2504 fb33a53d95399da070e45ac720096ff9 362 Pfam PF03462 PCRF domain 13 205 1.0E-77 T 12-10-2018 IPR005139 Peptide chain release factor GO:0006415 Vc3S01_2504 fb33a53d95399da070e45ac720096ff9 362 SMART SM00937 67 180 1.6E-67 T 12-10-2018 IPR005139 Peptide chain release factor GO:0006415 Vc3S01_2504 fb33a53d95399da070e45ac720096ff9 362 Gene3D G3DSA:3.30.70.1660 115 343 3.1E-95 T 12-10-2018 Vc3S01_2504 fb33a53d95399da070e45ac720096ff9 362 Gene3D G3DSA:1.20.58.410 3 96 1.4E-8 T 12-10-2018 Vc3S01_0056 ff7814e3486452f95509f98d009c6c4b 105 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 42 105 3.2E-16 T 12-10-2018 IPR010035 ThiS, thiamine-biosynthesis Vc3S01_0056 ff7814e3486452f95509f98d009c6c4b 105 Gene3D G3DSA:3.10.20.30 40 105 5.0E-18 T 12-10-2018 IPR012675 Beta-grasp domain superfamily Vc3S01_0056 ff7814e3486452f95509f98d009c6c4b 105 Pfam PF02597 ThiS family 46 105 2.0E-12 T 12-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 Vc3S01_0056 ff7814e3486452f95509f98d009c6c4b 105 SUPERFAMILY SSF54285 40 105 2.04E-14 T 12-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp Vc3S01_0446 d84eba120303179c89ab96f5e07f7933 221 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2 178 0.0033 T 12-10-2018 Vc3S01_0446 d84eba120303179c89ab96f5e07f7933 221 SUPERFAMILY SSF51735 2 213 1.43E-40 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_0446 d84eba120303179c89ab96f5e07f7933 221 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 1 17 4.0E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_0446 d84eba120303179c89ab96f5e07f7933 221 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 179 4.0E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_0446 d84eba120303179c89ab96f5e07f7933 221 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 160 4.0E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_0446 d84eba120303179c89ab96f5e07f7933 221 Gene3D G3DSA:3.40.50.720 1 221 1.7E-51 T 12-10-2018 Vc3S01_0446 d84eba120303179c89ab96f5e07f7933 221 Pfam PF00106 short chain dehydrogenase 2 182 6.2E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A0241 4d86d219591b1c6a9858ae4f4cc8f9b8 463 PRINTS PR00131 Glycosyl hydrolase family 1 signature 292 306 2.8E-14 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Vc3S01_A0241 4d86d219591b1c6a9858ae4f4cc8f9b8 463 PRINTS PR00131 Glycosyl hydrolase family 1 signature 398 415 2.8E-14 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Vc3S01_A0241 4d86d219591b1c6a9858ae4f4cc8f9b8 463 PRINTS PR00131 Glycosyl hydrolase family 1 signature 423 435 2.8E-14 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Vc3S01_A0241 4d86d219591b1c6a9858ae4f4cc8f9b8 463 PRINTS PR00131 Glycosyl hydrolase family 1 signature 377 388 2.8E-14 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Vc3S01_A0241 4d86d219591b1c6a9858ae4f4cc8f9b8 463 PRINTS PR00131 Glycosyl hydrolase family 1 signature 356 364 2.8E-14 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Vc3S01_A0241 4d86d219591b1c6a9858ae4f4cc8f9b8 463 Gene3D G3DSA:3.20.20.80 1 460 7.4E-150 T 12-10-2018 Vc3S01_A0241 4d86d219591b1c6a9858ae4f4cc8f9b8 463 SUPERFAMILY SSF51445 2 455 6.85E-157 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily Vc3S01_A0241 4d86d219591b1c6a9858ae4f4cc8f9b8 463 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 8 22 - T 12-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site Vc3S01_A0241 4d86d219591b1c6a9858ae4f4cc8f9b8 463 Pfam PF00232 Glycosyl hydrolase family 1 3 457 7.3E-147 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Vc3S01_A0241 4d86d219591b1c6a9858ae4f4cc8f9b8 463 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 356 364 - T 12-10-2018 IPR018120 Glycoside hydrolase family 1, active site Vc3S01_0142 a90888b507b5da446178b3d80ab51346 218 Gene3D G3DSA:3.30.70.330 111 217 4.8E-26 T 12-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily Vc3S01_0142 a90888b507b5da446178b3d80ab51346 218 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 131 200 2.7E-17 T 12-10-2018 IPR000504 RNA recognition motif domain GO:0003676 Vc3S01_0142 a90888b507b5da446178b3d80ab51346 218 SUPERFAMILY SSF54928 117 209 9.67E-27 T 12-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 Vc3S01_0142 a90888b507b5da446178b3d80ab51346 218 SMART SM00360 130 202 1.4E-20 T 12-10-2018 IPR000504 RNA recognition motif domain GO:0003676 Vc3S01_A0415 6410809b22185e817ae83e1b70431451 115 Gene3D G3DSA:1.10.260.40 3 85 2.3E-10 T 12-10-2018 Vc3S01_A0415 6410809b22185e817ae83e1b70431451 115 SUPERFAMILY SSF47413 8 87 1.77E-18 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Vc3S01_A0481 c9c6f9eeee050e620936ba41aa2c2cd5 186 Gene3D G3DSA:2.160.10.10 1 184 1.5E-67 T 12-10-2018 Vc3S01_A0481 c9c6f9eeee050e620936ba41aa2c2cd5 186 SMART SM01266 5 58 6.9E-12 T 12-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 Vc3S01_A0481 c9c6f9eeee050e620936ba41aa2c2cd5 186 SUPERFAMILY SSF51161 2 184 4.71E-51 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily Vc3S01_A0481 c9c6f9eeee050e620936ba41aa2c2cd5 186 Pfam PF12464 Maltose acetyltransferase 7 52 1.1E-10 T 12-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 Vc3S01_A0481 c9c6f9eeee050e620936ba41aa2c2cd5 186 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 130 164 3.3E-10 T 12-10-2018 IPR001451 Hexapeptide repeat Vc3S01_A0481 c9c6f9eeee050e620936ba41aa2c2cd5 186 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 138 166 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 Vc3S01_A1841 f84483bb12b582b37a8a56e8b1c333ed 240 SUPERFAMILY SSF55469 1 238 6.15E-72 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Vc3S01_A1841 f84483bb12b582b37a8a56e8b1c333ed 240 PIRSF PIRSF005426 1 240 5.6E-83 T 12-10-2018 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 Vc3S01_A1841 f84483bb12b582b37a8a56e8b1c333ed 240 Pfam PF00881 Nitroreductase family 8 159 4.3E-23 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Vc3S01_A1841 f84483bb12b582b37a8a56e8b1c333ed 240 Gene3D G3DSA:3.40.109.10 1 240 2.1E-76 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Vc3S01_2062 0c321c541145da2d85b4f9fdd39d59ca 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 3.9E-18 T 12-10-2018 IPR000362 Fumarate lyase family Vc3S01_2062 0c321c541145da2d85b4f9fdd39d59ca 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 3.9E-18 T 12-10-2018 IPR000362 Fumarate lyase family Vc3S01_2062 0c321c541145da2d85b4f9fdd39d59ca 456 PRINTS PR00149 Fumarate lyase superfamily signature 252 279 3.9E-18 T 12-10-2018 IPR000362 Fumarate lyase family Vc3S01_2062 0c321c541145da2d85b4f9fdd39d59ca 456 PRINTS PR00149 Fumarate lyase superfamily signature 295 311 3.9E-18 T 12-10-2018 IPR000362 Fumarate lyase family Vc3S01_2062 0c321c541145da2d85b4f9fdd39d59ca 456 ProSitePatterns PS00163 Fumarate lyases signature. 295 304 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 Vc3S01_2062 0c321c541145da2d85b4f9fdd39d59ca 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 456 1.3E-151 T 12-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Vc3S01_2062 0c321c541145da2d85b4f9fdd39d59ca 456 Gene3D G3DSA:1.10.275.10 1 117 2.0E-50 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal Vc3S01_2062 0c321c541145da2d85b4f9fdd39d59ca 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 332 446 2.6E-52 T 12-10-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 Vc3S01_2062 0c321c541145da2d85b4f9fdd39d59ca 456 Pfam PF00206 Lyase 14 313 4.2E-75 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal Vc3S01_2062 0c321c541145da2d85b4f9fdd39d59ca 456 SUPERFAMILY SSF48557 4 448 5.5E-109 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 Vc3S01_2062 0c321c541145da2d85b4f9fdd39d59ca 456 Gene3D G3DSA:1.20.200.10 118 447 4.9E-159 T 12-10-2018 Vc3S01_2062 0c321c541145da2d85b4f9fdd39d59ca 456 Gene3D G3DSA:1.10.40.30 383 446 4.9E-159 T 12-10-2018 Vc3S01_A1711 b49ca07e2d4fb098af816621eb53a3ca 1033 SUPERFAMILY SSF82866 286 480 4.19E-34 T 12-10-2018 Vc3S01_A1711 b49ca07e2d4fb098af816621eb53a3ca 1033 SUPERFAMILY SSF82693 136 317 1.41E-6 T 12-10-2018 Vc3S01_A1711 b49ca07e2d4fb098af816621eb53a3ca 1033 SUPERFAMILY SSF82866 797 1022 7.72E-47 T 12-10-2018 Vc3S01_A1711 b49ca07e2d4fb098af816621eb53a3ca 1033 SUPERFAMILY SSF82693 38 131 1.67E-17 T 12-10-2018 Vc3S01_A1711 b49ca07e2d4fb098af816621eb53a3ca 1033 Gene3D G3DSA:1.20.1640.10 8 499 1.8E-252 T 12-10-2018 Vc3S01_A1711 b49ca07e2d4fb098af816621eb53a3ca 1033 SUPERFAMILY SSF82714 724 797 1.18E-9 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Vc3S01_A1711 b49ca07e2d4fb098af816621eb53a3ca 1033 Gene3D G3DSA:3.30.2090.10 715 802 1.8E-252 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Vc3S01_A1711 b49ca07e2d4fb098af816621eb53a3ca 1033 Gene3D G3DSA:1.20.1640.10 500 1019 1.8E-252 T 12-10-2018 Vc3S01_A1711 b49ca07e2d4fb098af816621eb53a3ca 1033 Pfam PF00873 AcrB/AcrD/AcrF family 1 1021 7.3E-159 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_A1711 b49ca07e2d4fb098af816621eb53a3ca 1033 Gene3D G3DSA:3.30.70.1430 38 810 1.8E-252 T 12-10-2018 Vc3S01_A1711 b49ca07e2d4fb098af816621eb53a3ca 1033 Gene3D G3DSA:3.30.70.1320 131 318 1.8E-252 T 12-10-2018 Vc3S01_A1711 b49ca07e2d4fb098af816621eb53a3ca 1033 SUPERFAMILY SSF82714 177 259 3.92E-17 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Vc3S01_A1711 b49ca07e2d4fb098af816621eb53a3ca 1033 Gene3D G3DSA:3.30.70.1430 557 667 1.8E-252 T 12-10-2018 Vc3S01_A1711 b49ca07e2d4fb098af816621eb53a3ca 1033 Gene3D G3DSA:3.30.2090.10 173 265 1.8E-252 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Vc3S01_A1711 b49ca07e2d4fb098af816621eb53a3ca 1033 PRINTS PR00702 Acriflavin resistance protein family signature 378 402 2.0E-22 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_A1711 b49ca07e2d4fb098af816621eb53a3ca 1033 PRINTS PR00702 Acriflavin resistance protein family signature 324 347 2.0E-22 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_A1711 b49ca07e2d4fb098af816621eb53a3ca 1033 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 2.0E-22 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_A1711 b49ca07e2d4fb098af816621eb53a3ca 1033 PRINTS PR00702 Acriflavin resistance protein family signature 431 454 2.0E-22 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_A1711 b49ca07e2d4fb098af816621eb53a3ca 1033 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 2.0E-22 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_A1711 b49ca07e2d4fb098af816621eb53a3ca 1033 Gene3D G3DSA:3.30.70.1440 668 859 1.8E-252 T 12-10-2018 Vc3S01_0691 5e6f7341542e9e50cb7c35a665346765 328 Gene3D G3DSA:3.40.50.2300 159 321 1.8E-45 T 12-10-2018 Vc3S01_0691 5e6f7341542e9e50cb7c35a665346765 328 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 49 8.0E-18 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Vc3S01_0691 5e6f7341542e9e50cb7c35a665346765 328 SMART SM00354 1 74 2.9E-15 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Vc3S01_0691 5e6f7341542e9e50cb7c35a665346765 328 Gene3D G3DSA:3.40.50.2300 79 319 1.8E-45 T 12-10-2018 Vc3S01_0691 5e6f7341542e9e50cb7c35a665346765 328 SUPERFAMILY SSF53822 76 321 1.47E-42 T 12-10-2018 IPR028082 Periplasmic binding protein-like I Vc3S01_0691 5e6f7341542e9e50cb7c35a665346765 328 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 12-10-2018 Vc3S01_0691 5e6f7341542e9e50cb7c35a665346765 328 SUPERFAMILY SSF47413 1 51 2.53E-12 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Vc3S01_0691 5e6f7341542e9e50cb7c35a665346765 328 Gene3D G3DSA:1.10.260.40 1 60 7.2E-18 T 12-10-2018 Vc3S01_0691 5e6f7341542e9e50cb7c35a665346765 328 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.7E-6 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Vc3S01_0691 5e6f7341542e9e50cb7c35a665346765 328 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.7E-6 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Vc3S01_0691 5e6f7341542e9e50cb7c35a665346765 328 Pfam PF13377 Periplasmic binding protein-like domain 167 327 8.4E-32 T 12-10-2018 Vc3S01_A0379 73800614f4eabb19d297aacdc507c58d 177 SUPERFAMILY SSF49401 26 177 1.29E-27 T 12-10-2018 IPR008966 Adhesion domain superfamily Vc3S01_A0379 73800614f4eabb19d297aacdc507c58d 177 Gene3D G3DSA:2.60.40.1090 25 177 7.4E-31 T 12-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 Vc3S01_A0379 73800614f4eabb19d297aacdc507c58d 177 Pfam PF00419 Fimbrial protein 27 177 2.1E-13 T 12-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 Vc3S01_0298 8fcb49cdaca3ddcc1cb2a67012da68ca 425 SMART SM01274 28 161 2.2E-74 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 Vc3S01_0298 8fcb49cdaca3ddcc1cb2a67012da68ca 425 Gene3D G3DSA:3.40.50.720 171 425 2.2E-83 T 12-10-2018 Vc3S01_0298 8fcb49cdaca3ddcc1cb2a67012da68ca 425 SUPERFAMILY SSF53223 20 171 3.88E-52 T 12-10-2018 Vc3S01_0298 8fcb49cdaca3ddcc1cb2a67012da68ca 425 Gene3D G3DSA:3.40.50.10380 6 170 2.3E-66 T 12-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 Vc3S01_0298 8fcb49cdaca3ddcc1cb2a67012da68ca 425 PIRSF PIRSF000106 47 128 2.7E-10 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Vc3S01_0298 8fcb49cdaca3ddcc1cb2a67012da68ca 425 PIRSF PIRSF000106 120 425 1.8E-62 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Vc3S01_0298 8fcb49cdaca3ddcc1cb2a67012da68ca 425 SUPERFAMILY SSF51735 173 420 8.77E-81 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_0298 8fcb49cdaca3ddcc1cb2a67012da68ca 425 ProSitePatterns PS00331 Malic enzymes signature. 169 185 - T 12-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 Vc3S01_0298 8fcb49cdaca3ddcc1cb2a67012da68ca 425 Pfam PF03949 Malic enzyme, NAD binding domain 175 366 8.9E-26 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 Vc3S01_0298 8fcb49cdaca3ddcc1cb2a67012da68ca 425 SMART SM00919 173 409 3.8E-141 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 Vc3S01_0298 8fcb49cdaca3ddcc1cb2a67012da68ca 425 Pfam PF00390 Malic enzyme, N-terminal domain 30 124 2.5E-20 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 Vc3S01_p30016 774bc720d3d8dd91d8b55e0f44f8265e 217 ProSitePatterns PS00398 Site-specific recombinases signature 2. 71 83 - T 12-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 Vc3S01_p30016 774bc720d3d8dd91d8b55e0f44f8265e 217 Pfam PF00239 Resolvase, N terminal domain 12 166 6.3E-28 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Vc3S01_p30016 774bc720d3d8dd91d8b55e0f44f8265e 217 ProSitePatterns PS00397 Site-specific recombinases active site. 15 23 - T 12-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 Vc3S01_p30016 774bc720d3d8dd91d8b55e0f44f8265e 217 SMART SM00857 12 166 9.9E-39 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Vc3S01_p30016 774bc720d3d8dd91d8b55e0f44f8265e 217 SUPERFAMILY SSF53041 11 166 1.57E-31 T 12-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 Vc3S01_p30016 774bc720d3d8dd91d8b55e0f44f8265e 217 Gene3D G3DSA:3.40.50.1390 6 173 8.5E-31 T 12-10-2018 Vc3S01_2313 b51d2f60ce200100654e7eb52c976d59 435 SUPERFAMILY SSF56322 27 425 4.19E-99 T 12-10-2018 IPR005801 ADC synthase GO:0009058 Vc3S01_2313 b51d2f60ce200100654e7eb52c976d59 435 Pfam PF00425 chorismate binding enzyme 164 417 5.0E-71 T 12-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal Vc3S01_2313 b51d2f60ce200100654e7eb52c976d59 435 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 85 424 1.1E-101 T 12-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 Vc3S01_2313 b51d2f60ce200100654e7eb52c976d59 435 Hamap MF_01935 Isochorismate synthase MenF [menF]. 3 427 30.947 T 12-10-2018 IPR034681 Isochorismate synthase MenF GO:0008909|GO:0009234 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 Vc3S01_2313 b51d2f60ce200100654e7eb52c976d59 435 Gene3D G3DSA:3.60.120.10 1 429 3.2E-126 T 12-10-2018 IPR005801 ADC synthase GO:0009058 Vc3S01_p30038 355c93e427b96d94edf430db7d2ae197 216 Pfam PF00239 Resolvase, N terminal domain 15 167 3.9E-23 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Vc3S01_p30038 355c93e427b96d94edf430db7d2ae197 216 Gene3D G3DSA:3.40.50.1390 12 177 2.4E-27 T 12-10-2018 Vc3S01_p30038 355c93e427b96d94edf430db7d2ae197 216 ProSitePatterns PS00398 Site-specific recombinases signature 2. 72 84 - T 12-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 Vc3S01_p30038 355c93e427b96d94edf430db7d2ae197 216 SUPERFAMILY SSF53041 14 167 2.88E-27 T 12-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 Vc3S01_p30038 355c93e427b96d94edf430db7d2ae197 216 ProSitePatterns PS00397 Site-specific recombinases active site. 17 25 - T 12-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 Vc3S01_p30038 355c93e427b96d94edf430db7d2ae197 216 SMART SM00857 14 167 1.5E-28 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Vc3S01_2319 4372dd3f782447fef27d9afb592002d7 95 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 33 95 2.9E-26 T 12-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain Vc3S01_2319 4372dd3f782447fef27d9afb592002d7 95 Pfam PF12836 Helix-hairpin-helix motif 33 93 7.9E-22 T 12-10-2018 Vc3S01_2319 4372dd3f782447fef27d9afb592002d7 95 Gene3D G3DSA:1.10.150.280 21 95 1.1E-22 T 12-10-2018 Vc3S01_2319 4372dd3f782447fef27d9afb592002d7 95 SMART SM00278 43 62 9.2 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Vc3S01_2319 4372dd3f782447fef27d9afb592002d7 95 SMART SM00278 73 92 31.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Vc3S01_2319 4372dd3f782447fef27d9afb592002d7 95 SUPERFAMILY SSF47781 29 95 1.33E-26 T 12-10-2018 IPR010994 RuvA domain 2-like Vc3S01_1476 326dbf49aa752d9a6f585baa7196c3ec 490 SUPERFAMILY SSF55486 1 490 5.74E-116 T 12-10-2018 Vc3S01_1476 326dbf49aa752d9a6f585baa7196c3ec 490 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 397 418 8.5E-44 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 Vc3S01_1476 326dbf49aa752d9a6f585baa7196c3ec 490 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 288 304 8.5E-44 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 Vc3S01_1476 326dbf49aa752d9a6f585baa7196c3ec 490 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 241 260 8.5E-44 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 Vc3S01_1476 326dbf49aa752d9a6f585baa7196c3ec 490 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 261 280 8.5E-44 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 Vc3S01_1476 326dbf49aa752d9a6f585baa7196c3ec 490 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 327 346 8.5E-44 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 Vc3S01_1476 326dbf49aa752d9a6f585baa7196c3ec 490 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 145 165 8.5E-44 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 Vc3S01_1476 326dbf49aa752d9a6f585baa7196c3ec 490 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 441 459 8.5E-44 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 Vc3S01_1476 326dbf49aa752d9a6f585baa7196c3ec 490 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 8 489 5.3E-95 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 Vc3S01_1476 326dbf49aa752d9a6f585baa7196c3ec 490 PIRSF PIRSF006615 1 490 2.1E-197 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 Vc3S01_1476 326dbf49aa752d9a6f585baa7196c3ec 490 Gene3D G3DSA:1.10.1370.30 1 490 4.7E-196 T 12-10-2018 Vc3S01_2733 baef0f1da88df0f0695bc0e5a978d44b 407 Gene3D G3DSA:3.40.50.300 217 407 5.6E-52 T 12-10-2018 Vc3S01_2733 baef0f1da88df0f0695bc0e5a978d44b 407 SMART SM00490 260 341 1.8E-31 T 12-10-2018 IPR001650 Helicase, C-terminal Vc3S01_2733 baef0f1da88df0f0695bc0e5a978d44b 407 SUPERFAMILY SSF52540 76 358 1.26E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2733 baef0f1da88df0f0695bc0e5a978d44b 407 SMART SM00487 22 222 2.7E-55 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Vc3S01_2733 baef0f1da88df0f0695bc0e5a978d44b 407 Gene3D G3DSA:3.40.50.300 1 211 7.3E-70 T 12-10-2018 Vc3S01_2733 baef0f1da88df0f0695bc0e5a978d44b 407 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site Vc3S01_2733 baef0f1da88df0f0695bc0e5a978d44b 407 Hamap MF_00967 ATP-dependent RNA helicase SrmB [srmB]. 3 407 49.8 T 12-10-2018 IPR028621 ATP-dependent RNA helicase SrmB GO:0000027|GO:0004004 Vc3S01_2733 baef0f1da88df0f0695bc0e5a978d44b 407 Pfam PF00271 Helicase conserved C-terminal domain 235 341 1.7E-31 T 12-10-2018 IPR001650 Helicase, C-terminal Vc3S01_2733 baef0f1da88df0f0695bc0e5a978d44b 407 Pfam PF00270 DEAD/DEAH box helicase 27 195 7.7E-45 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Vc3S01_1644 9d36dae2215560c993930fb0d57e155b 149 Gene3D G3DSA:1.20.1270.380 1 89 1.8E-48 T 12-10-2018 IPR038339 MatP, N-terminal domain superfamily Vc3S01_1644 9d36dae2215560c993930fb0d57e155b 149 Hamap MF_01073 Macrodomain Ter protein [matP]. 1 148 30.461 T 12-10-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 Vc3S01_1644 9d36dae2215560c993930fb0d57e155b 149 Pfam PF06303 MatP N-terminal domain 2 85 2.0E-42 T 12-10-2018 IPR035087 MatP, N-terminal Vc3S01_1644 9d36dae2215560c993930fb0d57e155b 149 Gene3D G3DSA:1.10.1220.10 98 149 3.1E-23 T 12-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 Vc3S01_1644 9d36dae2215560c993930fb0d57e155b 149 Pfam PF17414 MatP C-terminal ribbon-helix-helix domain 88 147 1.0E-26 T 12-10-2018 IPR035375 MatP, C-terminal ribbon-helix-helix domain Vc3S01_1644 9d36dae2215560c993930fb0d57e155b 149 ProDom PD033720 UPF0268 YCBG DEHYDROGENASE PM0482 PBPRA1775 PLU1774 YPO1433/Y2737/YP0877 VV1664 HI1323 HD0178 1 133 3.0E-69 T 12-10-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 Vc3S01_1073 ee8978df19ba0c89352b07750ba6e32f 202 Pfam PF03695 Uncharacterised protein family (UPF0149) 18 151 4.6E-7 T 12-10-2018 IPR011978 Uncharacterised protein family UPF0149 Vc3S01_1073 ee8978df19ba0c89352b07750ba6e32f 202 Gene3D G3DSA:3.10.450.50 147 202 2.8E-9 T 12-10-2018 Vc3S01_1073 ee8978df19ba0c89352b07750ba6e32f 202 Pfam PF02810 SEC-C motif 184 202 1.5E-9 T 12-10-2018 IPR004027 SEC-C motif Vc3S01_1073 ee8978df19ba0c89352b07750ba6e32f 202 SUPERFAMILY SSF103642 182 201 3.27E-7 T 12-10-2018 Vc3S01_2002 8e3575bd43c14b10fe4304bc7d14ea10 347 PRINTS PR00410 Phenol hydroxylase reductase family signature 41 53 2.5E-5 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Vc3S01_2002 8e3575bd43c14b10fe4304bc7d14ea10 347 PRINTS PR00410 Phenol hydroxylase reductase family signature 125 144 2.5E-5 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Vc3S01_2002 8e3575bd43c14b10fe4304bc7d14ea10 347 PRINTS PR00410 Phenol hydroxylase reductase family signature 215 223 2.5E-5 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Vc3S01_2002 8e3575bd43c14b10fe4304bc7d14ea10 347 Pfam PF00970 Oxidoreductase FAD-binding domain 19 108 1.0E-13 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 Vc3S01_2002 8e3575bd43c14b10fe4304bc7d14ea10 347 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 296 304 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 Vc3S01_2002 8e3575bd43c14b10fe4304bc7d14ea10 347 SUPERFAMILY SSF52343 119 249 2.1E-29 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Vc3S01_2002 8e3575bd43c14b10fe4304bc7d14ea10 347 SUPERFAMILY SSF63380 4 110 5.79E-26 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Vc3S01_2002 8e3575bd43c14b10fe4304bc7d14ea10 347 Pfam PF00175 Oxidoreductase NAD-binding domain 126 229 4.4E-10 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 Vc3S01_2002 8e3575bd43c14b10fe4304bc7d14ea10 347 Gene3D G3DSA:2.40.30.10 5 109 6.1E-25 T 12-10-2018 Vc3S01_2002 8e3575bd43c14b10fe4304bc7d14ea10 347 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 271 337 8.5E-11 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Vc3S01_2002 8e3575bd43c14b10fe4304bc7d14ea10 347 Gene3D G3DSA:3.10.20.30 261 347 2.1E-20 T 12-10-2018 IPR012675 Beta-grasp domain superfamily Vc3S01_2002 8e3575bd43c14b10fe4304bc7d14ea10 347 Gene3D G3DSA:3.40.50.80 116 254 1.2E-26 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Vc3S01_2002 8e3575bd43c14b10fe4304bc7d14ea10 347 SUPERFAMILY SSF54292 238 346 9.83E-24 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Vc3S01_2476 d010e73a17dbde4c5d91d7cadb1e2aac 308 SMART SM00260 17 153 2.9E-24 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Vc3S01_2476 d010e73a17dbde4c5d91d7cadb1e2aac 308 Pfam PF00072 Response regulator receiver domain 184 302 2.7E-18 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_2476 d010e73a17dbde4c5d91d7cadb1e2aac 308 Gene3D G3DSA:3.40.50.2300 180 308 2.0E-25 T 12-10-2018 Vc3S01_2476 d010e73a17dbde4c5d91d7cadb1e2aac 308 SUPERFAMILY SSF52172 183 306 1.57E-25 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_2476 d010e73a17dbde4c5d91d7cadb1e2aac 308 SMART SM00448 182 302 7.7E-20 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_2476 d010e73a17dbde4c5d91d7cadb1e2aac 308 SUPERFAMILY SSF50341 16 157 7.98E-36 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Vc3S01_2476 d010e73a17dbde4c5d91d7cadb1e2aac 308 Gene3D G3DSA:2.30.30.40 23 147 2.0E-28 T 12-10-2018 Vc3S01_2476 d010e73a17dbde4c5d91d7cadb1e2aac 308 Gene3D G3DSA:2.40.50.180 39 153 2.0E-28 T 12-10-2018 Vc3S01_2476 d010e73a17dbde4c5d91d7cadb1e2aac 308 PIRSF PIRSF002867 1 308 1.9E-103 T 12-10-2018 IPR024181 Chemotaxis response regulator CheV Vc3S01_2476 d010e73a17dbde4c5d91d7cadb1e2aac 308 Pfam PF01584 CheW-like domain 21 155 1.6E-34 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Vc3S01_1868 d3b23ec20df67d4d146aaf896ba3d00c 958 Gene3D G3DSA:3.30.559.10 1 174 1.8E-34 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Vc3S01_1868 d3b23ec20df67d4d146aaf896ba3d00c 958 Gene3D G3DSA:3.30.559.10 442 608 3.1E-26 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Vc3S01_1868 d3b23ec20df67d4d146aaf896ba3d00c 958 Pfam PF00668 Condensation domain 446 689 5.1E-7 T 12-10-2018 IPR001242 Condensation domain Vc3S01_1868 d3b23ec20df67d4d146aaf896ba3d00c 958 Pfam PF00668 Condensation domain 4 434 1.6E-33 T 12-10-2018 IPR001242 Condensation domain Vc3S01_1868 d3b23ec20df67d4d146aaf896ba3d00c 958 Gene3D G3DSA:3.30.559.30 614 855 1.5E-23 T 12-10-2018 Vc3S01_1868 d3b23ec20df67d4d146aaf896ba3d00c 958 Gene3D G3DSA:3.30.559.30 182 439 1.7E-58 T 12-10-2018 Vc3S01_1868 d3b23ec20df67d4d146aaf896ba3d00c 958 SUPERFAMILY SSF52777 447 627 9.45E-13 T 12-10-2018 Vc3S01_1868 d3b23ec20df67d4d146aaf896ba3d00c 958 SUPERFAMILY SSF52777 618 830 3.11E-19 T 12-10-2018 Vc3S01_1868 d3b23ec20df67d4d146aaf896ba3d00c 958 SUPERFAMILY SSF52777 185 426 4.11E-39 T 12-10-2018 Vc3S01_1868 d3b23ec20df67d4d146aaf896ba3d00c 958 SUPERFAMILY SSF52777 4 175 7.34E-18 T 12-10-2018 Vc3S01_A1546 f1cdb740e0f2a7be7abff26cdbeac2c8 311 Gene3D G3DSA:3.60.10.10 87 307 1.3E-18 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Vc3S01_A1546 f1cdb740e0f2a7be7abff26cdbeac2c8 311 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 92 299 2.1E-7 T 12-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase Vc3S01_A1546 f1cdb740e0f2a7be7abff26cdbeac2c8 311 SUPERFAMILY SSF56219 80 305 7.85E-23 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Vc3S01_1807 65a1dd695d616a4f5a26e7bef382a6c0 2231 Pfam PF12920 TcdA/TcdB pore forming domain 984 1629 1.3E-144 T 12-10-2018 IPR024769 TcdA/TcdB toxin, pore forming domain GO:0009405 Vc3S01_2377 7fd0008d61e4ffc7b90be1332752b9e1 233 SUPERFAMILY SSF53067 4 107 8.63E-32 T 12-10-2018 Vc3S01_2377 7fd0008d61e4ffc7b90be1332752b9e1 233 Gene3D G3DSA:3.30.420.40 5 202 8.9E-85 T 12-10-2018 Vc3S01_2377 7fd0008d61e4ffc7b90be1332752b9e1 233 Gene3D G3DSA:3.30.420.40 96 190 8.9E-85 T 12-10-2018 Vc3S01_2377 7fd0008d61e4ffc7b90be1332752b9e1 233 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 5 221 3.6E-68 T 12-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 Vc3S01_2377 7fd0008d61e4ffc7b90be1332752b9e1 233 SUPERFAMILY SSF53067 111 219 2.72E-26 T 12-10-2018 Vc3S01_2377 7fd0008d61e4ffc7b90be1332752b9e1 233 Pfam PF00814 Glycoprotease family 30 152 5.3E-32 T 12-10-2018 IPR000905 Gcp-like domain Vc3S01_0372 a22019d57b6f245ed676686e25d10460 450 PIRSF PIRSF000726 2 450 2.4E-129 T 12-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Vc3S01_0372 a22019d57b6f245ed676686e25d10460 450 Gene3D G3DSA:3.30.70.260 304 447 8.3E-48 T 12-10-2018 Vc3S01_0372 a22019d57b6f245ed676686e25d10460 450 SUPERFAMILY SSF55021 297 394 1.41E-20 T 12-10-2018 Vc3S01_0372 a22019d57b6f245ed676686e25d10460 450 SUPERFAMILY SSF55021 377 449 2.16E-15 T 12-10-2018 Vc3S01_0372 a22019d57b6f245ed676686e25d10460 450 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 6 449 1.9E-123 T 12-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Vc3S01_0372 a22019d57b6f245ed676686e25d10460 450 ProSitePatterns PS00324 Aspartokinase signature. 6 14 - T 12-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Vc3S01_0372 a22019d57b6f245ed676686e25d10460 450 Gene3D G3DSA:3.40.1160.10 6 290 1.9E-98 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Vc3S01_0372 a22019d57b6f245ed676686e25d10460 450 Pfam PF00696 Amino acid kinase family 6 278 3.5E-48 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Vc3S01_0372 a22019d57b6f245ed676686e25d10460 450 Gene3D G3DSA:3.30.70.260 310 383 8.3E-48 T 12-10-2018 Vc3S01_0372 a22019d57b6f245ed676686e25d10460 450 SUPERFAMILY SSF53633 6 293 3.14E-76 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Vc3S01_0372 a22019d57b6f245ed676686e25d10460 450 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 6 449 5.1E-122 T 12-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Vc3S01_0372 a22019d57b6f245ed676686e25d10460 450 Gene3D G3DSA:1.20.120.1320 42 135 1.9E-98 T 12-10-2018 Vc3S01_A0149 ca726ed97f64ca980d0526b796954f93 81 SUPERFAMILY SSF101744 1 80 9.42E-23 T 12-10-2018 IPR023534 Rof/RNase P-like Reactome: R-HSA-6784531 Vc3S01_A0149 ca726ed97f64ca980d0526b796954f93 81 Gene3D G3DSA:2.30.30.400 2 79 9.1E-15 T 12-10-2018 IPR038626 Rof-like superfamily Vc3S01_A0149 ca726ed97f64ca980d0526b796954f93 81 Pfam PF07073 Modulator of Rho-dependent transcription termination (ROF) 1 80 1.4E-27 T 12-10-2018 IPR009778 Modulator of Rho-dependent transcription termination Vc3S01_1955 4ae8ae235dd184b49a5a1c5d09c3e5cd 400 Pfam PF07055 Enoyl reductase FAD binding domain 326 389 1.3E-30 T 12-10-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Vc3S01_1955 4ae8ae235dd184b49a5a1c5d09c3e5cd 400 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 82 317 4.8E-112 T 12-10-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Vc3S01_1955 4ae8ae235dd184b49a5a1c5d09c3e5cd 400 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 395 57.402 T 12-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Vc3S01_1955 4ae8ae235dd184b49a5a1c5d09c3e5cd 400 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 80 2.5E-37 T 12-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Vc3S01_1955 4ae8ae235dd184b49a5a1c5d09c3e5cd 400 Gene3D G3DSA:3.40.50.720 1 398 2.7E-180 T 12-10-2018 Vc3S01_1069 cbc7255b25a676a9139cc47db498fd03 608 Gene3D G3DSA:2.60.40.10 6 112 2.3E-8 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_1069 cbc7255b25a676a9139cc47db498fd03 608 Gene3D G3DSA:2.60.40.1180 521 607 8.1E-19 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta Vc3S01_1069 cbc7255b25a676a9139cc47db498fd03 608 SMART SM00642 126 518 2.6E-85 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Vc3S01_1069 cbc7255b25a676a9139cc47db498fd03 608 SUPERFAMILY SSF51445 115 527 4.99E-96 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily Vc3S01_1069 cbc7255b25a676a9139cc47db498fd03 608 PIRSF PIRSF036918 1 608 1.2E-251 T 12-10-2018 IPR017069 Maltodextrin glucosidase GO:0004558|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.20|KEGG: 00500+3.2.1.20|MetaCyc: PWY-842 Vc3S01_1069 cbc7255b25a676a9139cc47db498fd03 608 SUPERFAMILY SSF81296 1 109 1.26E-22 T 12-10-2018 IPR014756 Immunoglobulin E-set Vc3S01_1069 cbc7255b25a676a9139cc47db498fd03 608 SUPERFAMILY SSF51011 527 607 2.11E-14 T 12-10-2018 Vc3S01_1069 cbc7255b25a676a9139cc47db498fd03 608 Pfam PF02903 Alpha amylase, N-terminal ig-like domain 2 104 1.1E-6 T 12-10-2018 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain GO:0004553|GO:0005975 Vc3S01_1069 cbc7255b25a676a9139cc47db498fd03 608 Gene3D G3DSA:3.20.20.80 114 520 4.3E-135 T 12-10-2018 Vc3S01_1069 cbc7255b25a676a9139cc47db498fd03 608 Pfam PF00128 Alpha amylase, catalytic domain 175 491 4.5E-76 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Vc3S01_2819 5823241eb9134df56121e066e8a04357 541 SMART SM00382 42 195 1.4E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_2819 5823241eb9134df56121e066e8a04357 541 SUPERFAMILY SSF52540 6 264 1.53E-34 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2819 5823241eb9134df56121e066e8a04357 541 Gene3D G3DSA:3.90.70.10 343 459 1.6E-33 T 12-10-2018 Vc3S01_2819 5823241eb9134df56121e066e8a04357 541 Pfam PF13401 AAA domain 42 171 5.0E-24 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_2819 5823241eb9134df56121e066e8a04357 541 Gene3D G3DSA:1.10.101.10 460 527 9.5E-21 T 12-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 Vc3S01_2819 5823241eb9134df56121e066e8a04357 541 Pfam PF01471 Putative peptidoglycan binding domain 469 522 8.2E-6 T 12-10-2018 IPR002477 Peptidoglycan binding-like Vc3S01_2819 5823241eb9134df56121e066e8a04357 541 Gene3D G3DSA:3.40.50.300 25 184 5.7E-15 T 12-10-2018 Vc3S01_2819 5823241eb9134df56121e066e8a04357 541 SUPERFAMILY SSF47090 455 531 1.43E-11 T 12-10-2018 IPR036365 PGBD-like superfamily Vc3S01_2373 3d86c6b06d92031ed3309a38402d31bb 563 Gene3D G3DSA:3.30.300.310 458 559 1.0E-29 T 12-10-2018 Vc3S01_2373 3d86c6b06d92031ed3309a38402d31bb 563 Pfam PF00501 AMP-binding enzyme 29 461 9.6E-109 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Vc3S01_2373 3d86c6b06d92031ed3309a38402d31bb 563 SUPERFAMILY SSF56801 13 553 5.1E-151 T 12-10-2018 Vc3S01_2373 3d86c6b06d92031ed3309a38402d31bb 563 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 12-10-2018 IPR020845 AMP-binding, conserved site Vc3S01_2373 3d86c6b06d92031ed3309a38402d31bb 563 Gene3D G3DSA:3.40.50.12780 9 457 1.8E-119 T 12-10-2018 Vc3S01_2373 3d86c6b06d92031ed3309a38402d31bb 563 Pfam PF13193 AMP-binding enzyme C-terminal domain 470 544 2.0E-17 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Vc3S01_2203 cd7efe747321b67c9fec220c3a0c129b 248 Pfam PF05618 Putative ATP-dependant zinc protease 107 245 8.0E-48 T 12-10-2018 Vc3S01_2203 cd7efe747321b67c9fec220c3a0c129b 248 Gene3D G3DSA:2.40.70.10 104 235 1.4E-41 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily Vc3S01_2203 cd7efe747321b67c9fec220c3a0c129b 248 SUPERFAMILY SSF58100 33 121 7.59E-5 T 12-10-2018 Vc3S01_2203 cd7efe747321b67c9fec220c3a0c129b 248 SUPERFAMILY SSF50630 107 242 1.92E-42 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily Vc3S01_A1287 561d3f75961ba4cd04203915e88b1272 480 SMART SM00240 5 56 1.4E-8 T 12-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 Vc3S01_A1287 561d3f75961ba4cd04203915e88b1272 480 Gene3D G3DSA:2.60.200.20 2 88 3.3E-21 T 12-10-2018 Vc3S01_A1287 561d3f75961ba4cd04203915e88b1272 480 SUPERFAMILY SSF49879 3 80 2.3E-23 T 12-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 Vc3S01_A1287 561d3f75961ba4cd04203915e88b1272 480 Pfam PF00498 FHA domain 7 73 1.5E-16 T 12-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 Vc3S01_2905 d318c3f903e96c0876765cd13d1c919d 476 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 18 474 53.899 T 12-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 Vc3S01_2905 d318c3f903e96c0876765cd13d1c919d 476 SUPERFAMILY SSF52540 18 235 2.32E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2905 d318c3f903e96c0876765cd13d1c919d 476 SUPERFAMILY SSF50447 242 324 5.3E-24 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Vc3S01_2905 d318c3f903e96c0876765cd13d1c919d 476 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 33 213 1.9E-13 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Vc3S01_2905 d318c3f903e96c0876765cd13d1c919d 476 Pfam PF00009 Elongation factor Tu GTP binding domain 26 233 3.3E-45 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Vc3S01_2905 d318c3f903e96c0876765cd13d1c919d 476 Gene3D G3DSA:3.40.50.300 6 239 1.1E-71 T 12-10-2018 Vc3S01_2905 d318c3f903e96c0876765cd13d1c919d 476 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 82 97 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site Vc3S01_2905 d318c3f903e96c0876765cd13d1c919d 476 SUPERFAMILY SSF50465 332 434 5.76E-30 T 12-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Vc3S01_2905 d318c3f903e96c0876765cd13d1c919d 476 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 27 433 5.2E-199 T 12-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 Vc3S01_2905 d318c3f903e96c0876765cd13d1c919d 476 PRINTS PR00315 GTP-binding elongation factor signature 125 136 5.9E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Vc3S01_2905 d318c3f903e96c0876765cd13d1c919d 476 PRINTS PR00315 GTP-binding elongation factor signature 109 119 5.9E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Vc3S01_2905 d318c3f903e96c0876765cd13d1c919d 476 PRINTS PR00315 GTP-binding elongation factor signature 89 97 5.9E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Vc3S01_2905 d318c3f903e96c0876765cd13d1c919d 476 PRINTS PR00315 GTP-binding elongation factor signature 162 171 5.9E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Vc3S01_2905 d318c3f903e96c0876765cd13d1c919d 476 PRINTS PR00315 GTP-binding elongation factor signature 28 41 5.9E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Vc3S01_2905 d318c3f903e96c0876765cd13d1c919d 476 Gene3D G3DSA:2.40.30.10 331 434 3.6E-29 T 12-10-2018 Vc3S01_2905 d318c3f903e96c0876765cd13d1c919d 476 Gene3D G3DSA:2.40.30.10 242 327 6.1E-27 T 12-10-2018 Vc3S01_1883 bfec4df914ec5d52f1bb62efb1e461f4 104 Gene3D G3DSA:3.30.110.70 1 104 4.8E-33 T 12-10-2018 Vc3S01_1883 bfec4df914ec5d52f1bb62efb1e461f4 104 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 103 26.233 T 12-10-2018 IPR002765 Uncharacterised protein family UPF0145 Vc3S01_1883 bfec4df914ec5d52f1bb62efb1e461f4 104 Pfam PF01906 Putative heavy-metal-binding 1 103 1.3E-39 T 12-10-2018 IPR002765 Uncharacterised protein family UPF0145 Vc3S01_1883 bfec4df914ec5d52f1bb62efb1e461f4 104 SUPERFAMILY SSF117782 1 103 9.16E-38 T 12-10-2018 IPR035439 UPF0145 domain superfamily Vc3S01_0436 395204d9c8e6c3ab3a1a3d1acd38d0c0 138 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 11 124 29.717 T 12-10-2018 IPR016716 Regulator of ribonuclease activity B Vc3S01_0436 395204d9c8e6c3ab3a1a3d1acd38d0c0 138 Gene3D G3DSA:3.30.70.970 1 131 6.3E-59 T 12-10-2018 IPR036701 RraB-like superfamily Vc3S01_0436 395204d9c8e6c3ab3a1a3d1acd38d0c0 138 PIRSF PIRSF018193 8 138 1.5E-58 T 12-10-2018 IPR016716 Regulator of ribonuclease activity B Vc3S01_0436 395204d9c8e6c3ab3a1a3d1acd38d0c0 138 SUPERFAMILY SSF89946 8 126 3.14E-39 T 12-10-2018 IPR036701 RraB-like superfamily Vc3S01_0436 395204d9c8e6c3ab3a1a3d1acd38d0c0 138 Pfam PF06877 Regulator of ribonuclease activity B 18 120 3.0E-34 T 12-10-2018 IPR009671 Regulator of ribonuclease activity B domain Vc3S01_2353 70d400c201070c82f87b491c422f5f66 350 Gene3D G3DSA:3.90.1150.10 6 347 6.2E-115 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Vc3S01_2353 70d400c201070c82f87b491c422f5f66 350 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 194 213 - T 12-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site Vc3S01_2353 70d400c201070c82f87b491c422f5f66 350 Gene3D G3DSA:1.10.260.50 16 273 6.2E-115 T 12-10-2018 Vc3S01_2353 70d400c201070c82f87b491c422f5f66 350 Pfam PF00266 Aminotransferase class-V 6 348 4.1E-66 T 12-10-2018 IPR000192 Aminotransferase class V domain Vc3S01_2353 70d400c201070c82f87b491c422f5f66 350 Gene3D G3DSA:3.40.640.10 62 238 6.2E-115 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Vc3S01_2353 70d400c201070c82f87b491c422f5f66 350 SUPERFAMILY SSF53383 6 348 3.86E-84 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Vc3S01_2353 70d400c201070c82f87b491c422f5f66 350 PIRSF PIRSF005572 3 349 1.0E-97 T 12-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 Vc3S01_A1218 9f143178f166fa180fdd335a99ff48bb 853 Gene3D G3DSA:3.40.50.300 352 533 8.7E-40 T 12-10-2018 Vc3S01_A1218 9f143178f166fa180fdd335a99ff48bb 853 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 302 314 - T 12-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 Vc3S01_A1218 9f143178f166fa180fdd335a99ff48bb 853 SMART SM01086 758 850 2.3E-7 T 12-10-2018 IPR019489 Clp ATPase, C-terminal Vc3S01_A1218 9f143178f166fa180fdd335a99ff48bb 853 SUPERFAMILY SSF81923 11 140 2.35E-14 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Vc3S01_A1218 9f143178f166fa180fdd335a99ff48bb 853 SUPERFAMILY SSF52540 168 495 3.33E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A1218 9f143178f166fa180fdd335a99ff48bb 853 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 13 842 0.0 T 12-10-2018 IPR017729 Type VI secretion system, ATPase ClpV1 Vc3S01_A1218 9f143178f166fa180fdd335a99ff48bb 853 Gene3D G3DSA:3.40.50.300 160 350 7.7E-64 T 12-10-2018 Vc3S01_A1218 9f143178f166fa180fdd335a99ff48bb 853 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 24 74 0.0031 T 12-10-2018 IPR004176 Clp, N-terminal Vc3S01_A1218 9f143178f166fa180fdd335a99ff48bb 853 Pfam PF07724 AAA domain (Cdc48 subfamily) 586 751 9.5E-38 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Vc3S01_A1218 9f143178f166fa180fdd335a99ff48bb 853 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 590 608 2.7E-31 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 Vc3S01_A1218 9f143178f166fa180fdd335a99ff48bb 853 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 697 711 2.7E-31 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 Vc3S01_A1218 9f143178f166fa180fdd335a99ff48bb 853 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 635 653 2.7E-31 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 Vc3S01_A1218 9f143178f166fa180fdd335a99ff48bb 853 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 664 682 2.7E-31 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 Vc3S01_A1218 9f143178f166fa180fdd335a99ff48bb 853 Gene3D G3DSA:3.40.50.300 539 755 9.3E-64 T 12-10-2018 Vc3S01_A1218 9f143178f166fa180fdd335a99ff48bb 853 SMART SM00382 206 351 9.9E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_A1218 9f143178f166fa180fdd335a99ff48bb 853 SMART SM00382 586 728 1.9E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_A1218 9f143178f166fa180fdd335a99ff48bb 853 Gene3D G3DSA:1.10.1780.10 1 152 1.4E-30 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Vc3S01_A1218 9f143178f166fa180fdd335a99ff48bb 853 Gene3D G3DSA:1.10.8.60 758 850 3.0E-10 T 12-10-2018 Vc3S01_A1218 9f143178f166fa180fdd335a99ff48bb 853 SUPERFAMILY SSF52540 535 841 1.03E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A1218 9f143178f166fa180fdd335a99ff48bb 853 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 758 832 7.1E-11 T 12-10-2018 IPR019489 Clp ATPase, C-terminal Vc3S01_A1218 9f143178f166fa180fdd335a99ff48bb 853 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 211 342 2.3E-10 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Vc3S01_0501 e20271c14666f0aa5fc6a8143d800851 402 SUPERFAMILY SSF51905 5 385 1.62E-58 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_0501 e20271c14666f0aa5fc6a8143d800851 402 Pfam PF01494 FAD binding domain 5 347 8.6E-29 T 12-10-2018 IPR002938 FAD-binding domain GO:0071949 Vc3S01_0501 e20271c14666f0aa5fc6a8143d800851 402 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 12-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 Vc3S01_0501 e20271c14666f0aa5fc6a8143d800851 402 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 6 391 1.3E-137 T 12-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 Vc3S01_0501 e20271c14666f0aa5fc6a8143d800851 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 1.8E-18 T 12-10-2018 Vc3S01_0501 e20271c14666f0aa5fc6a8143d800851 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 1.8E-18 T 12-10-2018 Vc3S01_0501 e20271c14666f0aa5fc6a8143d800851 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 1.8E-18 T 12-10-2018 Vc3S01_0501 e20271c14666f0aa5fc6a8143d800851 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 1.8E-18 T 12-10-2018 Vc3S01_0501 e20271c14666f0aa5fc6a8143d800851 402 Gene3D G3DSA:3.50.50.60 6 339 1.3E-123 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_0501 e20271c14666f0aa5fc6a8143d800851 402 Gene3D G3DSA:3.30.9.50 80 270 1.3E-123 T 12-10-2018 Vc3S01_A0814 c8c3233fc78068331fa0576afd3e20c3 512 SMART SM00052 249 494 9.9E-81 T 12-10-2018 IPR001633 EAL domain Vc3S01_A0814 c8c3233fc78068331fa0576afd3e20c3 512 Gene3D G3DSA:3.30.70.270 78 251 3.8E-44 T 12-10-2018 Vc3S01_A0814 c8c3233fc78068331fa0576afd3e20c3 512 SUPERFAMILY SSF141868 255 502 1.31E-75 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_A0814 c8c3233fc78068331fa0576afd3e20c3 512 Gene3D G3DSA:3.20.20.450 252 511 1.4E-81 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_A0814 c8c3233fc78068331fa0576afd3e20c3 512 SUPERFAMILY SSF55073 89 234 7.85E-38 T 12-10-2018 IPR029787 Nucleotide cyclase Vc3S01_A0814 c8c3233fc78068331fa0576afd3e20c3 512 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 82 238 2.7E-34 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A0814 c8c3233fc78068331fa0576afd3e20c3 512 SMART SM00267 73 240 1.7E-34 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A0814 c8c3233fc78068331fa0576afd3e20c3 512 Pfam PF00563 EAL domain 256 488 5.0E-64 T 12-10-2018 IPR001633 EAL domain Vc3S01_A0814 c8c3233fc78068331fa0576afd3e20c3 512 Pfam PF00990 Diguanylate cyclase, GGDEF domain 84 234 5.1E-35 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A1658 781a15a5d3df5a72a2708266a8e5c346 289 Gene3D G3DSA:3.40.190.10 80 169 1.2E-13 T 12-10-2018 Vc3S01_A1658 781a15a5d3df5a72a2708266a8e5c346 289 SUPERFAMILY SSF46785 1 107 9.49E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A1658 781a15a5d3df5a72a2708266a8e5c346 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 1.6E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A1658 781a15a5d3df5a72a2708266a8e5c346 289 Gene3D G3DSA:3.40.190.10 175 249 2.9E-8 T 12-10-2018 Vc3S01_A1658 781a15a5d3df5a72a2708266a8e5c346 289 SUPERFAMILY SSF53850 89 284 1.81E-28 T 12-10-2018 Vc3S01_A1658 781a15a5d3df5a72a2708266a8e5c346 289 Pfam PF03466 LysR substrate binding domain 88 283 2.7E-29 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_A1658 781a15a5d3df5a72a2708266a8e5c346 289 Gene3D G3DSA:1.10.10.10 1 79 1.3E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A1669 fffec0926c897b55171b4077b755e164 491 Gene3D G3DSA:2.60.40.1610 92 228 1.5E-52 T 12-10-2018 IPR037050 Domain of unknown function DUF1254 superfamily Vc3S01_A1669 fffec0926c897b55171b4077b755e164 491 Gene3D G3DSA:2.60.120.600 312 491 6.1E-43 T 12-10-2018 IPR037049 Domain of unknown function DUF1214, C-terminal domain superfamily Vc3S01_A1669 fffec0926c897b55171b4077b755e164 491 Gene3D G3DSA:1.10.3360.10 64 292 1.5E-52 T 12-10-2018 IPR023289 VPA0735-like domain superfamily Vc3S01_A1669 fffec0926c897b55171b4077b755e164 491 Pfam PF06742 Protein of unknown function (DUF1214) 364 472 1.4E-26 T 12-10-2018 IPR010621 Domain of unknown function DUF1214 Vc3S01_A1669 fffec0926c897b55171b4077b755e164 491 SUPERFAMILY SSF160935 43 478 2.75E-97 T 12-10-2018 Vc3S01_A1669 fffec0926c897b55171b4077b755e164 491 Pfam PF06863 Protein of unknown function (DUF1254) 108 200 9.5E-10 T 12-10-2018 IPR010679 Domain of unknown function DUF1254 Vc3S01_A1027 c20cdad1bbe3f50951e8b3c13404b40b 372 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 268 362 2.3E-21 T 12-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 Vc3S01_A1027 c20cdad1bbe3f50951e8b3c13404b40b 372 PIRSF PIRSF006487 1 372 9.4E-79 T 12-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 Vc3S01_A1027 c20cdad1bbe3f50951e8b3c13404b40b 372 Pfam PF01571 Aminomethyltransferase folate-binding domain 10 254 9.1E-88 T 12-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain Vc3S01_A1027 c20cdad1bbe3f50951e8b3c13404b40b 372 SUPERFAMILY SSF101790 279 371 3.43E-25 T 12-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal Vc3S01_A1027 c20cdad1bbe3f50951e8b3c13404b40b 372 SUPERFAMILY SSF103025 4 281 3.14E-89 T 12-10-2018 Vc3S01_A1027 c20cdad1bbe3f50951e8b3c13404b40b 372 Gene3D G3DSA:2.40.30.110 284 361 3.2E-28 T 12-10-2018 Vc3S01_A1027 c20cdad1bbe3f50951e8b3c13404b40b 372 Gene3D G3DSA:3.30.1360.120 7 231 5.2E-84 T 12-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 Vc3S01_A1027 c20cdad1bbe3f50951e8b3c13404b40b 372 Gene3D G3DSA:4.10.1250.10 233 281 1.8E-20 T 12-10-2018 Vc3S01_A1027 c20cdad1bbe3f50951e8b3c13404b40b 372 Gene3D G3DSA:3.30.70.1400 56 139 5.2E-84 T 12-10-2018 Vc3S01_A1027 c20cdad1bbe3f50951e8b3c13404b40b 372 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 6 366 2.0E-105 T 12-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 Vc3S01_0902 36cab29de3924d240d7ab2eefee98997 384 ProSitePatterns PS00787 Chorismate synthase signature 1. 39 54 - T 12-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Vc3S01_0902 36cab29de3924d240d7ab2eefee98997 384 Hamap MF_00300 Chorismate synthase [aroC]. 33 375 37.809 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Vc3S01_0902 36cab29de3924d240d7ab2eefee98997 384 PIRSF PIRSF001456 26 383 5.4E-144 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Vc3S01_0902 36cab29de3924d240d7ab2eefee98997 384 Pfam PF01264 Chorismate synthase 33 368 1.5E-144 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Vc3S01_0902 36cab29de3924d240d7ab2eefee98997 384 Gene3D G3DSA:3.60.150.10 24 384 3.2E-161 T 12-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Vc3S01_0902 36cab29de3924d240d7ab2eefee98997 384 ProSitePatterns PS00789 Chorismate synthase signature 3. 342 358 - T 12-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Vc3S01_0902 36cab29de3924d240d7ab2eefee98997 384 SUPERFAMILY SSF103263 27 379 3.14E-150 T 12-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Vc3S01_0902 36cab29de3924d240d7ab2eefee98997 384 ProSitePatterns PS00788 Chorismate synthase signature 2. 147 163 - T 12-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Vc3S01_0902 36cab29de3924d240d7ab2eefee98997 384 TIGRFAM TIGR00033 aroC: chorismate synthase 33 373 6.7E-144 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Vc3S01_1159 92c18b1431c1a3147723c0093cda2ad9 342 PIRSF PIRSF005632 1 342 2.1E-195 T 12-10-2018 IPR016456 Predicted cobalamin-independent methionine synthase, catalytic subunit Vc3S01_1159 92c18b1431c1a3147723c0093cda2ad9 342 SUPERFAMILY SSF51726 3 339 6.28E-70 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Vc3S01_1159 92c18b1431c1a3147723c0093cda2ad9 342 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 5 329 1.6E-36 T 12-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 Vc3S01_1159 92c18b1431c1a3147723c0093cda2ad9 342 Gene3D G3DSA:3.20.20.210 1 342 1.5E-136 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Vc3S01_A0969 d0485bd406fcf009026e6c808cc8837d 190 Pfam PF04264 YceI-like domain 25 188 2.4E-15 T 12-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like Vc3S01_A0969 d0485bd406fcf009026e6c808cc8837d 190 PIRSF PIRSF029811 1 190 5.5E-50 T 12-10-2018 IPR027016 Uncharacterised protein with YceI domain Vc3S01_A0969 d0485bd406fcf009026e6c808cc8837d 190 Gene3D G3DSA:2.40.128.110 21 190 8.7E-44 T 12-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily Vc3S01_A0969 d0485bd406fcf009026e6c808cc8837d 190 SUPERFAMILY SSF101874 24 190 1.16E-24 T 12-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily Vc3S01_A0969 d0485bd406fcf009026e6c808cc8837d 190 SMART SM00867 24 189 1.5E-19 T 12-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like Vc3S01_0854 ac424c1b224dc948a0b4e0ebc45f51b9 351 SUPERFAMILY SSF48029 133 344 4.97E-67 T 12-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical Vc3S01_0854 ac424c1b224dc948a0b4e0ebc45f51b9 351 Gene3D G3DSA:1.10.220.30 20 103 4.1E-17 T 12-10-2018 Vc3S01_0854 ac424c1b224dc948a0b4e0ebc45f51b9 351 Gene3D G3DSA:1.10.220.30 214 351 1.8E-43 T 12-10-2018 Vc3S01_0854 ac424c1b224dc948a0b4e0ebc45f51b9 351 Pfam PF14841 FliG middle domain 134 206 4.5E-26 T 12-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain Vc3S01_0854 ac424c1b224dc948a0b4e0ebc45f51b9 351 SUPERFAMILY SSF48029 20 135 6.28E-20 T 12-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical Vc3S01_0854 ac424c1b224dc948a0b4e0ebc45f51b9 351 Pfam PF01706 FliG C-terminal domain 236 343 4.8E-41 T 12-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal Vc3S01_0854 ac424c1b224dc948a0b4e0ebc45f51b9 351 PIRSF PIRSF003161 18 351 2.5E-114 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Vc3S01_0854 ac424c1b224dc948a0b4e0ebc45f51b9 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 214 239 8.3E-59 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Vc3S01_0854 ac424c1b224dc948a0b4e0ebc45f51b9 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 53 79 8.3E-59 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Vc3S01_0854 ac424c1b224dc948a0b4e0ebc45f51b9 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 245 265 8.3E-59 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Vc3S01_0854 ac424c1b224dc948a0b4e0ebc45f51b9 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 24 40 8.3E-59 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Vc3S01_0854 ac424c1b224dc948a0b4e0ebc45f51b9 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 267 287 8.3E-59 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Vc3S01_0854 ac424c1b224dc948a0b4e0ebc45f51b9 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 133 156 8.3E-59 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Vc3S01_0854 ac424c1b224dc948a0b4e0ebc45f51b9 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 291 317 8.3E-59 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Vc3S01_0854 ac424c1b224dc948a0b4e0ebc45f51b9 351 Gene3D G3DSA:1.10.220.30 108 212 2.4E-29 T 12-10-2018 Vc3S01_0854 ac424c1b224dc948a0b4e0ebc45f51b9 351 Pfam PF14842 FliG N-terminal domain 24 124 6.8E-28 T 12-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain Vc3S01_0854 ac424c1b224dc948a0b4e0ebc45f51b9 351 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 20 349 4.7E-98 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Vc3S01_2326 95bbf7a4adf6fc958a6f5dc0270decaf 601 PRINTS PR00344 Bacterial sensor protein C-terminal signature 577 590 1.7E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_2326 95bbf7a4adf6fc958a6f5dc0270decaf 601 PRINTS PR00344 Bacterial sensor protein C-terminal signature 542 552 1.7E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_2326 95bbf7a4adf6fc958a6f5dc0270decaf 601 PRINTS PR00344 Bacterial sensor protein C-terminal signature 553 571 1.7E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_2326 95bbf7a4adf6fc958a6f5dc0270decaf 601 PRINTS PR00344 Bacterial sensor protein C-terminal signature 524 538 1.7E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_2326 95bbf7a4adf6fc958a6f5dc0270decaf 601 PIRSF PIRSF036431 1 599 4.5E-189 T 12-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) Vc3S01_2326 95bbf7a4adf6fc958a6f5dc0270decaf 601 Gene3D G3DSA:1.10.287.130 348 435 3.4E-20 T 12-10-2018 Vc3S01_2326 95bbf7a4adf6fc958a6f5dc0270decaf 601 SUPERFAMILY SSF55874 439 591 7.6E-30 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_2326 95bbf7a4adf6fc958a6f5dc0270decaf 601 SMART SM00387 483 593 1.5E-22 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_2326 95bbf7a4adf6fc958a6f5dc0270decaf 601 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 486 590 1.4E-15 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_2326 95bbf7a4adf6fc958a6f5dc0270decaf 601 Gene3D G3DSA:3.30.565.10 442 594 6.6E-33 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_2326 95bbf7a4adf6fc958a6f5dc0270decaf 601 SUPERFAMILY SSF103190 48 186 7.85E-30 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Vc3S01_2326 95bbf7a4adf6fc958a6f5dc0270decaf 601 SUPERFAMILY SSF47384 357 440 1.96E-12 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Vc3S01_2326 95bbf7a4adf6fc958a6f5dc0270decaf 601 SMART SM00388 372 440 3.2E-9 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_2326 95bbf7a4adf6fc958a6f5dc0270decaf 601 Pfam PF02743 Cache domain 35 215 9.6E-13 T 12-10-2018 IPR033479 Double Cache domain 1 Vc3S01_2326 95bbf7a4adf6fc958a6f5dc0270decaf 601 Gene3D G3DSA:3.30.450.20 54 175 4.6E-79 T 12-10-2018 Vc3S01_2326 95bbf7a4adf6fc958a6f5dc0270decaf 601 Pfam PF00512 His Kinase A (phospho-acceptor) domain 373 440 5.1E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_2326 95bbf7a4adf6fc958a6f5dc0270decaf 601 Gene3D G3DSA:3.30.450.20 41 279 4.6E-79 T 12-10-2018 Vc3S01_0029 334b6b777b60071af1b8e268f86556fc 459 SUPERFAMILY SSF48295 355 458 3.4E-38 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 Vc3S01_0029 334b6b777b60071af1b8e268f86556fc 459 SMART SM00760 367 436 3.4E-45 T 12-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 Vc3S01_0029 334b6b777b60071af1b8e268f86556fc 459 ProSitePatterns PS01008 DnaA protein signature. 417 436 - T 12-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 Vc3S01_0029 334b6b777b60071af1b8e268f86556fc 459 Pfam PF11638 DnaA N-terminal domain 1 56 2.6E-16 T 12-10-2018 IPR024633 DnaA N-terminal domain Vc3S01_0029 334b6b777b60071af1b8e268f86556fc 459 Gene3D G3DSA:3.30.300.180 1 105 7.3E-38 T 12-10-2018 IPR038454 DnaA, N-terminal domain superfamily Vc3S01_0029 334b6b777b60071af1b8e268f86556fc 459 Gene3D G3DSA:3.40.50.300 109 288 3.8E-49 T 12-10-2018 Vc3S01_0029 334b6b777b60071af1b8e268f86556fc 459 SUPERFAMILY SSF52540 124 335 2.34E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0029 334b6b777b60071af1b8e268f86556fc 459 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 1 457 4.0E-185 T 12-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 Vc3S01_0029 334b6b777b60071af1b8e268f86556fc 459 Gene3D G3DSA:1.10.1750.10 366 459 1.4E-39 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 Vc3S01_0029 334b6b777b60071af1b8e268f86556fc 459 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 255 282 1.2E-54 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Vc3S01_0029 334b6b777b60071af1b8e268f86556fc 459 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 189 203 1.2E-54 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Vc3S01_0029 334b6b777b60071af1b8e268f86556fc 459 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 417 436 1.2E-54 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Vc3S01_0029 334b6b777b60071af1b8e268f86556fc 459 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 221 235 1.2E-54 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Vc3S01_0029 334b6b777b60071af1b8e268f86556fc 459 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 157 177 1.2E-54 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Vc3S01_0029 334b6b777b60071af1b8e268f86556fc 459 SMART SM00382 156 369 4.6E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_0029 334b6b777b60071af1b8e268f86556fc 459 Pfam PF00308 Bacterial dnaA protein 125 341 1.2E-97 T 12-10-2018 IPR013317 Chromosomal replication initiator protein DnaA Vc3S01_0029 334b6b777b60071af1b8e268f86556fc 459 Gene3D G3DSA:1.10.8.60 290 360 1.5E-24 T 12-10-2018 Vc3S01_0029 334b6b777b60071af1b8e268f86556fc 459 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 2 458 33.087 T 12-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 Vc3S01_0029 334b6b777b60071af1b8e268f86556fc 459 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 368 436 1.7E-32 T 12-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 Vc3S01_2745 6de4a86405f0161b395ca9da6a6c9567 819 SUPERFAMILY SSF51735 463 636 1.79E-37 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_2745 6de4a86405f0161b395ca9da6a6c9567 819 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 460 1.2E-132 T 12-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Vc3S01_2745 6de4a86405f0161b395ca9da6a6c9567 819 Gene3D G3DSA:3.40.1160.10 3 295 2.3E-87 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Vc3S01_2745 6de4a86405f0161b395ca9da6a6c9567 819 Pfam PF00696 Amino acid kinase family 2 284 1.7E-52 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Vc3S01_2745 6de4a86405f0161b395ca9da6a6c9567 819 Gene3D G3DSA:3.40.50.720 467 811 9.6E-120 T 12-10-2018 Vc3S01_2745 6de4a86405f0161b395ca9da6a6c9567 819 SUPERFAMILY SSF55347 614 797 7.19E-51 T 12-10-2018 Vc3S01_2745 6de4a86405f0161b395ca9da6a6c9567 819 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 12-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Vc3S01_2745 6de4a86405f0161b395ca9da6a6c9567 819 Gene3D G3DSA:1.20.120.1320 41 142 2.3E-87 T 12-10-2018 Vc3S01_2745 6de4a86405f0161b395ca9da6a6c9567 819 SUPERFAMILY SSF55021 303 381 2.0E-22 T 12-10-2018 Vc3S01_2745 6de4a86405f0161b395ca9da6a6c9567 819 Pfam PF13840 ACT domain 393 456 1.9E-7 T 12-10-2018 IPR027795 CASTOR, ACT domain Vc3S01_2745 6de4a86405f0161b395ca9da6a6c9567 819 SUPERFAMILY SSF53633 1 298 8.75E-78 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Vc3S01_2745 6de4a86405f0161b395ca9da6a6c9567 819 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 472 606 2.3E-26 T 12-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 Vc3S01_2745 6de4a86405f0161b395ca9da6a6c9567 819 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 660 682 - T 12-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 Vc3S01_2745 6de4a86405f0161b395ca9da6a6c9567 819 Gene3D G3DSA:3.30.360.10 625 795 9.6E-120 T 12-10-2018 Vc3S01_2745 6de4a86405f0161b395ca9da6a6c9567 819 Pfam PF01842 ACT domain 324 379 7.8E-10 T 12-10-2018 IPR002912 ACT domain Vc3S01_2745 6de4a86405f0161b395ca9da6a6c9567 819 Gene3D G3DSA:3.30.2130.10 302 464 3.4E-46 T 12-10-2018 Vc3S01_2745 6de4a86405f0161b395ca9da6a6c9567 819 Pfam PF00742 Homoserine dehydrogenase 614 810 3.4E-47 T 12-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 Vc3S01_2745 6de4a86405f0161b395ca9da6a6c9567 819 PIRSF PIRSF000727 1 817 0.0 T 12-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Vc3S01_2745 6de4a86405f0161b395ca9da6a6c9567 819 SUPERFAMILY SSF55021 383 476 5.15E-22 T 12-10-2018 Vc3S01_1552 68b9a12a78312e633aa82011b3830ed2 506 Gene3D G3DSA:1.10.3360.10 71 311 1.0E-80 T 12-10-2018 IPR023289 VPA0735-like domain superfamily Vc3S01_1552 68b9a12a78312e633aa82011b3830ed2 506 Gene3D G3DSA:2.60.120.600 327 506 9.5E-58 T 12-10-2018 IPR037049 Domain of unknown function DUF1214, C-terminal domain superfamily Vc3S01_1552 68b9a12a78312e633aa82011b3830ed2 506 Gene3D G3DSA:2.60.40.1610 98 247 1.0E-80 T 12-10-2018 IPR037050 Domain of unknown function DUF1254 superfamily Vc3S01_1552 68b9a12a78312e633aa82011b3830ed2 506 Pfam PF06742 Protein of unknown function (DUF1214) 384 489 7.8E-26 T 12-10-2018 IPR010621 Domain of unknown function DUF1214 Vc3S01_1552 68b9a12a78312e633aa82011b3830ed2 506 SUPERFAMILY SSF160935 40 505 8.76E-142 T 12-10-2018 Vc3S01_1552 68b9a12a78312e633aa82011b3830ed2 506 Pfam PF06863 Protein of unknown function (DUF1254) 102 229 1.1E-27 T 12-10-2018 IPR010679 Domain of unknown function DUF1254 Vc3S01_A0184 f21113d3f3a99e33ad7618c8df33d36d 154 Gene3D G3DSA:3.40.630.30 3 153 2.9E-34 T 12-10-2018 Vc3S01_A0184 f21113d3f3a99e33ad7618c8df33d36d 154 Pfam PF00583 Acetyltransferase (GNAT) family 33 143 1.5E-17 T 12-10-2018 IPR000182 GNAT domain Vc3S01_A0184 f21113d3f3a99e33ad7618c8df33d36d 154 SUPERFAMILY SSF55729 1 149 7.31E-30 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_2844 be01109f6de1eac982c2b89e07ead843 610 Pfam PF01380 SIS domain 463 592 3.5E-24 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Vc3S01_2844 be01109f6de1eac982c2b89e07ead843 610 Pfam PF01380 SIS domain 290 419 1.2E-32 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Vc3S01_2844 be01109f6de1eac982c2b89e07ead843 610 Gene3D G3DSA:3.40.50.10490 448 595 2.5E-144 T 12-10-2018 Vc3S01_2844 be01109f6de1eac982c2b89e07ead843 610 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 610 40.218 T 12-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 Vc3S01_2844 be01109f6de1eac982c2b89e07ead843 610 SUPERFAMILY SSF53697 245 610 1.21E-112 T 12-10-2018 Vc3S01_2844 be01109f6de1eac982c2b89e07ead843 610 Pfam PF13522 Glutamine amidotransferase domain 55 174 3.0E-22 T 12-10-2018 Vc3S01_2844 be01109f6de1eac982c2b89e07ead843 610 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 610 6.5E-258 T 12-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 Vc3S01_2844 be01109f6de1eac982c2b89e07ead843 610 Gene3D G3DSA:3.60.20.10 2 241 5.9E-82 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Vc3S01_2844 be01109f6de1eac982c2b89e07ead843 610 SUPERFAMILY SSF56235 2 234 5.66E-76 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Vc3S01_2844 be01109f6de1eac982c2b89e07ead843 610 Gene3D G3DSA:3.40.50.10490 249 609 2.5E-144 T 12-10-2018 Vc3S01_3203 9adf9c7e1cf2a648559e6312b58c9de2 453 Pfam PF12804 MobA-like NTP transferase domain 5 122 3.9E-22 T 12-10-2018 IPR025877 MobA-like NTP transferase Vc3S01_3203 9adf9c7e1cf2a648559e6312b58c9de2 453 Gene3D G3DSA:3.90.550.10 1 224 4.9E-66 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Vc3S01_3203 9adf9c7e1cf2a648559e6312b58c9de2 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 265 296 9.0E-7 T 12-10-2018 IPR001451 Hexapeptide repeat Vc3S01_3203 9adf9c7e1cf2a648559e6312b58c9de2 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 314 348 9.0E-4 T 12-10-2018 IPR001451 Hexapeptide repeat Vc3S01_3203 9adf9c7e1cf2a648559e6312b58c9de2 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 392 426 8.3E-8 T 12-10-2018 IPR001451 Hexapeptide repeat Vc3S01_3203 9adf9c7e1cf2a648559e6312b58c9de2 453 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 400 428 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 Vc3S01_3203 9adf9c7e1cf2a648559e6312b58c9de2 453 SUPERFAMILY SSF53448 1 249 3.13E-63 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Vc3S01_3203 9adf9c7e1cf2a648559e6312b58c9de2 453 Gene3D G3DSA:2.160.10.10 225 453 4.7E-71 T 12-10-2018 Vc3S01_3203 9adf9c7e1cf2a648559e6312b58c9de2 453 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 4 451 6.4E-204 T 12-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 Vc3S01_3203 9adf9c7e1cf2a648559e6312b58c9de2 453 SUPERFAMILY SSF51161 252 434 5.33E-51 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily Vc3S01_3203 9adf9c7e1cf2a648559e6312b58c9de2 453 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 449 42.283 T 12-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 Vc3S01_A0257 538b7fd5ccf0a9ad1d35790c1ba85604 402 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 1.2E-24 T 12-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 Vc3S01_A0257 538b7fd5ccf0a9ad1d35790c1ba85604 402 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 192 399 5.2E-72 T 12-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 Vc3S01_A0257 538b7fd5ccf0a9ad1d35790c1ba85604 402 Pfam PF07670 Nucleoside recognition 90 185 1.5E-8 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 Vc3S01_A0257 538b7fd5ccf0a9ad1d35790c1ba85604 402 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 4 399 7.2E-142 T 12-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 Vc3S01_2549 7bca4ee67674dbda01e585e6ab375d38 458 Pfam PF14793 Domain of unknown function (DUF4478) 4 109 4.5E-50 T 12-10-2018 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 Vc3S01_2549 7bca4ee67674dbda01e585e6ab375d38 458 Gene3D G3DSA:3.40.50.450 121 450 2.3E-124 T 12-10-2018 Vc3S01_2549 7bca4ee67674dbda01e585e6ab375d38 458 Gene3D G3DSA:3.30.1850.10 1 120 9.5E-57 T 12-10-2018 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 Vc3S01_2549 7bca4ee67674dbda01e585e6ab375d38 458 SUPERFAMILY SSF102405 119 327 1.43E-42 T 12-10-2018 Vc3S01_2549 7bca4ee67674dbda01e585e6ab375d38 458 Pfam PF03641 Possible lysine decarboxylase 187 326 1.2E-35 T 12-10-2018 IPR031100 LOG family Vc3S01_2549 7bca4ee67674dbda01e585e6ab375d38 458 Pfam PF11892 Domain of unknown function (DUF3412) 330 450 1.0E-55 T 12-10-2018 IPR021826 Domain of unknown function DUF3412 KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 Vc3S01_1519 cd66be9f9e1ce896ebfcbf94389c3981 300 Pfam PF09130 Domain of unknown function (DUF1932) 196 265 3.0E-10 T 12-10-2018 IPR015814 Phosphogluconate dehydrogenase, NAD-binding, putative, C-terminal Vc3S01_1519 cd66be9f9e1ce896ebfcbf94389c3981 300 Gene3D G3DSA:1.10.1040.10 177 293 6.5E-32 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Vc3S01_1519 cd66be9f9e1ce896ebfcbf94389c3981 300 SUPERFAMILY SSF48179 169 273 2.89E-25 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Vc3S01_1519 cd66be9f9e1ce896ebfcbf94389c3981 300 SUPERFAMILY SSF51735 5 166 1.08E-28 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_1519 cd66be9f9e1ce896ebfcbf94389c3981 300 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 6 127 5.5E-10 T 12-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 Vc3S01_1519 cd66be9f9e1ce896ebfcbf94389c3981 300 Gene3D G3DSA:3.40.50.720 5 175 1.2E-32 T 12-10-2018 Vc3S01_1121 4365bc84293dbb57a8588503289cc85d 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 3.9E-25 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_1121 4365bc84293dbb57a8588503289cc85d 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 3.9E-25 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_1121 4365bc84293dbb57a8588503289cc85d 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 3.9E-25 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_1121 4365bc84293dbb57a8588503289cc85d 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 3.9E-25 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_1121 4365bc84293dbb57a8588503289cc85d 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 3.9E-25 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_1121 4365bc84293dbb57a8588503289cc85d 248 Pfam PF00106 short chain dehydrogenase 13 208 2.1E-52 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_1121 4365bc84293dbb57a8588503289cc85d 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Vc3S01_1121 4365bc84293dbb57a8588503289cc85d 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 165 184 3.7E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_1121 4365bc84293dbb57a8588503289cc85d 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 153 3.7E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_1121 4365bc84293dbb57a8588503289cc85d 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 91 102 3.7E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_1121 4365bc84293dbb57a8588503289cc85d 248 SUPERFAMILY SSF51735 9 242 6.42E-64 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_1121 4365bc84293dbb57a8588503289cc85d 248 Gene3D G3DSA:3.40.50.720 1 246 1.1E-70 T 12-10-2018 Vc3S01_1121 4365bc84293dbb57a8588503289cc85d 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 13 178 0.0022 T 12-10-2018 Vc3S01_2125 ebca36d71ffce5647dfca552a8dc5c8f 487 SUPERFAMILY SSF53649 2 474 5.82E-117 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Vc3S01_2125 ebca36d71ffce5647dfca552a8dc5c8f 487 Gene3D G3DSA:3.40.720.10 2 366 1.5E-93 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Vc3S01_2125 ebca36d71ffce5647dfca552a8dc5c8f 487 Gene3D G3DSA:3.30.1120.10 367 425 1.5E-93 T 12-10-2018 Vc3S01_2125 ebca36d71ffce5647dfca552a8dc5c8f 487 Pfam PF14707 C-terminal region of aryl-sulfatase 364 459 5.0E-7 T 12-10-2018 Vc3S01_2125 ebca36d71ffce5647dfca552a8dc5c8f 487 Pfam PF00884 Sulfatase 2 323 9.2E-58 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 Vc3S01_A0284 5589d637d3de6bfc6b921f5572aea515 418 SUPERFAMILY SSF52266 146 409 1.42E-23 T 12-10-2018 Vc3S01_A0284 5589d637d3de6bfc6b921f5572aea515 418 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 147 158 - T 12-10-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 Vc3S01_A0284 5589d637d3de6bfc6b921f5572aea515 418 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 147 404 2.2E-17 T 12-10-2018 IPR001087 GDSL lipase/esterase GO:0016788 Vc3S01_A0284 5589d637d3de6bfc6b921f5572aea515 418 Gene3D G3DSA:3.40.50.1110 134 414 2.8E-40 T 12-10-2018 IPR036514 SGNH hydrolase superfamily Vc3S01_A0625 093cd98a76c54083b15c671392312df6 119 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 5 101 2.7E-16 T 12-10-2018 IPR019289 Bacteriophage tail protein Gp41, putative Vc3S01_p20199 093cd98a76c54083b15c671392312df6 119 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 5 101 2.7E-16 T 12-10-2018 IPR019289 Bacteriophage tail protein Gp41, putative Vc3S01_A0990 bdb572da876feedb1d2abac1848d0eb5 137 Gene3D G3DSA:3.90.79.10 1 136 1.3E-44 T 12-10-2018 Vc3S01_A0990 bdb572da876feedb1d2abac1848d0eb5 137 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Vc3S01_A0990 bdb572da876feedb1d2abac1848d0eb5 137 PRINTS PR00502 NUDIX hydrolase family signature 33 47 2.0E-7 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Vc3S01_A0990 bdb572da876feedb1d2abac1848d0eb5 137 PRINTS PR00502 NUDIX hydrolase family signature 47 62 2.0E-7 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Vc3S01_A0990 bdb572da876feedb1d2abac1848d0eb5 137 SUPERFAMILY SSF55811 4 124 3.11E-32 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Vc3S01_A0990 bdb572da876feedb1d2abac1848d0eb5 137 Pfam PF00293 NUDIX domain 4 118 5.9E-24 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Vc3S01_A0958 c01b459129997e25891cea65b2db4f71 204 Pfam PF00043 Glutathione S-transferase, C-terminal domain 132 199 3.4E-7 T 12-10-2018 IPR004046 Glutathione S-transferase, C-terminal Vc3S01_A0958 c01b459129997e25891cea65b2db4f71 204 SUPERFAMILY SSF47616 72 204 2.37E-22 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Vc3S01_A0958 c01b459129997e25891cea65b2db4f71 204 SUPERFAMILY SSF52833 1 89 1.17E-19 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Vc3S01_A0958 c01b459129997e25891cea65b2db4f71 204 Gene3D G3DSA:1.20.1050.10 83 199 1.1E-28 T 12-10-2018 Vc3S01_A0958 c01b459129997e25891cea65b2db4f71 204 Gene3D G3DSA:3.40.30.10 1 77 1.3E-21 T 12-10-2018 Vc3S01_A0958 c01b459129997e25891cea65b2db4f71 204 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 79 5.0E-15 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Vc3S01_2060 4955ce132b2055ba826b8ab4f2d4df2e 374 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 7 365 2.7E-152 T 12-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 Vc3S01_2060 4955ce132b2055ba826b8ab4f2d4df2e 374 Gene3D G3DSA:2.30.30.280 216 286 6.4E-25 T 12-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 Vc3S01_2060 4955ce132b2055ba826b8ab4f2d4df2e 374 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 7 366 39.87 T 12-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 Vc3S01_2060 4955ce132b2055ba826b8ab4f2d4df2e 374 Gene3D G3DSA:3.40.50.620 1 214 1.4E-94 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Vc3S01_2060 4955ce132b2055ba826b8ab4f2d4df2e 374 Pfam PF03054 tRNA methyl transferase 7 365 4.6E-142 T 12-10-2018 Vc3S01_2060 4955ce132b2055ba826b8ab4f2d4df2e 374 SUPERFAMILY SSF52402 5 247 3.09E-56 T 12-10-2018 Vc3S01_2060 4955ce132b2055ba826b8ab4f2d4df2e 374 Gene3D G3DSA:2.40.30.10 287 372 8.0E-34 T 12-10-2018 Vc3S01_A1549 4ae2ff0936683429deffe5f7d9bdf9e5 463 SUPERFAMILY SSF56954 15 448 2.62E-50 T 12-10-2018 Vc3S01_A1549 4ae2ff0936683429deffe5f7d9bdf9e5 463 Gene3D G3DSA:1.20.1600.10 40 448 3.7E-42 T 12-10-2018 Vc3S01_A1549 4ae2ff0936683429deffe5f7d9bdf9e5 463 Pfam PF02321 Outer membrane efflux protein 48 230 7.2E-6 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Vc3S01_A1549 4ae2ff0936683429deffe5f7d9bdf9e5 463 Pfam PF02321 Outer membrane efflux protein 267 446 1.8E-16 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Vc3S01_2178 ba6c96f1a30050a63fd67cbc4f54922c 806 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 464 577 8.7E-32 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_2178 ba6c96f1a30050a63fd67cbc4f54922c 806 SUPERFAMILY SSF55874 406 577 1.15E-43 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_2178 ba6c96f1a30050a63fd67cbc4f54922c 806 Pfam PF00512 His Kinase A (phospho-acceptor) domain 353 417 4.1E-18 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_2178 ba6c96f1a30050a63fd67cbc4f54922c 806 Gene3D G3DSA:3.30.565.10 416 580 7.3E-47 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_2178 ba6c96f1a30050a63fd67cbc4f54922c 806 SMART SM00448 598 712 2.3E-21 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_2178 ba6c96f1a30050a63fd67cbc4f54922c 806 PRINTS PR00344 Bacterial sensor protein C-terminal signature 563 576 4.5E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_2178 ba6c96f1a30050a63fd67cbc4f54922c 806 PRINTS PR00344 Bacterial sensor protein C-terminal signature 522 532 4.5E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_2178 ba6c96f1a30050a63fd67cbc4f54922c 806 PRINTS PR00344 Bacterial sensor protein C-terminal signature 539 557 4.5E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_2178 ba6c96f1a30050a63fd67cbc4f54922c 806 PRINTS PR00344 Bacterial sensor protein C-terminal signature 504 518 4.5E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_2178 ba6c96f1a30050a63fd67cbc4f54922c 806 SUPERFAMILY SSF52172 596 724 8.11E-29 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_2178 ba6c96f1a30050a63fd67cbc4f54922c 806 SMART SM00387 464 579 2.0E-40 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_2178 ba6c96f1a30050a63fd67cbc4f54922c 806 SMART SM00388 352 417 1.4E-23 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_2178 ba6c96f1a30050a63fd67cbc4f54922c 806 Pfam PF00072 Response regulator receiver domain 601 712 1.6E-19 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_2178 ba6c96f1a30050a63fd67cbc4f54922c 806 Gene3D G3DSA:3.30.450.20 31 204 4.0E-19 T 12-10-2018 Vc3S01_2178 ba6c96f1a30050a63fd67cbc4f54922c 806 Gene3D G3DSA:3.40.50.2300 586 717 4.8E-31 T 12-10-2018 Vc3S01_2178 ba6c96f1a30050a63fd67cbc4f54922c 806 SUPERFAMILY SSF47384 338 418 3.73E-19 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Vc3S01_2178 ba6c96f1a30050a63fd67cbc4f54922c 806 Pfam PF02743 Cache domain 130 243 8.3E-12 T 12-10-2018 IPR033479 Double Cache domain 1 Vc3S01_2178 ba6c96f1a30050a63fd67cbc4f54922c 806 Gene3D G3DSA:1.10.287.130 319 415 7.1E-26 T 12-10-2018 Vc3S01_0405 7fb28c34e893489335fd54e9f7e13c10 969 SUPERFAMILY SSF52540 123 378 9.87E-37 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0405 7fb28c34e893489335fd54e9f7e13c10 969 SMART SM00490 519 603 2.7E-17 T 12-10-2018 IPR001650 Helicase, C-terminal Vc3S01_0405 7fb28c34e893489335fd54e9f7e13c10 969 Pfam PF00271 Helicase conserved C-terminal domain 494 603 1.8E-15 T 12-10-2018 IPR001650 Helicase, C-terminal Vc3S01_0405 7fb28c34e893489335fd54e9f7e13c10 969 Pfam PF00176 SNF2 family N-terminal domain 174 344 5.7E-15 T 12-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 Vc3S01_0405 7fb28c34e893489335fd54e9f7e13c10 969 Gene3D G3DSA:2.30.30.930 55 114 5.7E-26 T 12-10-2018 Vc3S01_0405 7fb28c34e893489335fd54e9f7e13c10 969 Pfam PF12137 RNA polymerase recycling family C-terminal 607 966 3.2E-148 T 12-10-2018 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 Vc3S01_0405 7fb28c34e893489335fd54e9f7e13c10 969 Gene3D G3DSA:3.40.50.10810 625 713 3.9E-6 T 12-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily Vc3S01_0405 7fb28c34e893489335fd54e9f7e13c10 969 Gene3D G3DSA:3.40.50.10810 150 437 9.8E-105 T 12-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily Vc3S01_0405 7fb28c34e893489335fd54e9f7e13c10 969 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 1 967 29.201 T 12-10-2018 IPR023949 RNA polymerase-associated protein RapA GO:0006355 Vc3S01_0405 7fb28c34e893489335fd54e9f7e13c10 969 SUPERFAMILY SSF52540 273 650 4.58E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0405 7fb28c34e893489335fd54e9f7e13c10 969 Gene3D G3DSA:3.40.50.300 483 624 1.1E-25 T 12-10-2018 Vc3S01_0405 7fb28c34e893489335fd54e9f7e13c10 969 Gene3D G3DSA:3.30.360.80 714 786 3.2E-30 T 12-10-2018 Vc3S01_0405 7fb28c34e893489335fd54e9f7e13c10 969 SMART SM00487 150 342 1.3E-14 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Vc3S01_0405 7fb28c34e893489335fd54e9f7e13c10 969 Gene3D G3DSA:2.30.30.140 1 53 4.9E-24 T 12-10-2018 Vc3S01_A0731 867a53b4f66702d2117b792a5abbe3c2 403 Pfam PF02803 Thiolase, C-terminal domain 272 400 4.2E-45 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 Vc3S01_A0731 867a53b4f66702d2117b792a5abbe3c2 403 ProSitePatterns PS00737 Thiolases signature 2. 348 364 - T 12-10-2018 IPR020613 Thiolase, conserved site GO:0016747 Vc3S01_A0731 867a53b4f66702d2117b792a5abbe3c2 403 PIRSF PIRSF000429 1 403 5.4E-131 T 12-10-2018 IPR002155 Thiolase GO:0016747 Vc3S01_A0731 867a53b4f66702d2117b792a5abbe3c2 403 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 85 103 - T 12-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 Vc3S01_A0731 867a53b4f66702d2117b792a5abbe3c2 403 SUPERFAMILY SSF53901 272 400 1.82E-38 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 Vc3S01_A0731 867a53b4f66702d2117b792a5abbe3c2 403 Pfam PF00108 Thiolase, N-terminal domain 5 264 7.5E-100 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 Vc3S01_A0731 867a53b4f66702d2117b792a5abbe3c2 403 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 400 5.2E-149 T 12-10-2018 IPR002155 Thiolase GO:0016747 Vc3S01_A0731 867a53b4f66702d2117b792a5abbe3c2 403 ProSitePatterns PS00099 Thiolases active site. 383 396 - T 12-10-2018 IPR020610 Thiolase, active site GO:0016747 Vc3S01_A0731 867a53b4f66702d2117b792a5abbe3c2 403 Gene3D G3DSA:3.40.47.10 127 399 1.5E-149 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 Vc3S01_A0731 867a53b4f66702d2117b792a5abbe3c2 403 Gene3D G3DSA:3.40.47.10 7 277 1.5E-149 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 Vc3S01_A0731 867a53b4f66702d2117b792a5abbe3c2 403 SUPERFAMILY SSF53901 5 271 3.29E-85 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 Vc3S01_0613 42f3af8cbd79ce9937dd7fdc9f0c301e 1044 Gene3D G3DSA:1.20.1640.10 13 511 7.8E-259 T 12-10-2018 Vc3S01_0613 42f3af8cbd79ce9937dd7fdc9f0c301e 1044 Gene3D G3DSA:3.30.2090.10 179 270 7.8E-259 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Vc3S01_0613 42f3af8cbd79ce9937dd7fdc9f0c301e 1044 SUPERFAMILY SSF82714 184 263 2.09E-11 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Vc3S01_0613 42f3af8cbd79ce9937dd7fdc9f0c301e 1044 Gene3D G3DSA:3.30.70.1430 567 657 7.8E-259 T 12-10-2018 Vc3S01_0613 42f3af8cbd79ce9937dd7fdc9f0c301e 1044 Gene3D G3DSA:1.20.1640.10 512 1024 7.8E-259 T 12-10-2018 Vc3S01_0613 42f3af8cbd79ce9937dd7fdc9f0c301e 1044 Pfam PF00873 AcrB/AcrD/AcrF family 6 1027 2.5E-174 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_0613 42f3af8cbd79ce9937dd7fdc9f0c301e 1044 SUPERFAMILY SSF82866 289 490 1.24E-41 T 12-10-2018 Vc3S01_0613 42f3af8cbd79ce9937dd7fdc9f0c301e 1044 Gene3D G3DSA:3.30.70.1430 41 807 7.8E-259 T 12-10-2018 Vc3S01_0613 42f3af8cbd79ce9937dd7fdc9f0c301e 1044 Gene3D G3DSA:3.30.70.1440 658 858 7.8E-259 T 12-10-2018 Vc3S01_0613 42f3af8cbd79ce9937dd7fdc9f0c301e 1044 SUPERFAMILY SSF82714 712 794 6.67E-5 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Vc3S01_0613 42f3af8cbd79ce9937dd7fdc9f0c301e 1044 SUPERFAMILY SSF82693 141 325 1.46E-13 T 12-10-2018 Vc3S01_0613 42f3af8cbd79ce9937dd7fdc9f0c301e 1044 SUPERFAMILY SSF82866 794 1029 3.27E-47 T 12-10-2018 Vc3S01_0613 42f3af8cbd79ce9937dd7fdc9f0c301e 1044 Gene3D G3DSA:3.30.70.1320 135 325 7.8E-259 T 12-10-2018 Vc3S01_0613 42f3af8cbd79ce9937dd7fdc9f0c301e 1044 SUPERFAMILY SSF82693 41 133 3.4E-22 T 12-10-2018 Vc3S01_0613 42f3af8cbd79ce9937dd7fdc9f0c301e 1044 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 5.0E-28 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_0613 42f3af8cbd79ce9937dd7fdc9f0c301e 1044 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 5.0E-28 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_0613 42f3af8cbd79ce9937dd7fdc9f0c301e 1044 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 5.0E-28 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_0613 42f3af8cbd79ce9937dd7fdc9f0c301e 1044 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 5.0E-28 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_0613 42f3af8cbd79ce9937dd7fdc9f0c301e 1044 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 5.0E-28 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_0613 42f3af8cbd79ce9937dd7fdc9f0c301e 1044 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 5.0E-28 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_0613 42f3af8cbd79ce9937dd7fdc9f0c301e 1044 Gene3D G3DSA:3.30.2090.10 711 799 7.8E-259 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Vc3S01_A0584 40455e6a26334af1c73b758cfa00d80c 205 Pfam PF02525 Flavodoxin-like fold 4 173 4.1E-45 T 12-10-2018 IPR003680 Flavodoxin-like fold Vc3S01_A0584 40455e6a26334af1c73b758cfa00d80c 205 Gene3D G3DSA:3.40.50.360 1 181 8.9E-54 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Vc3S01_A0584 40455e6a26334af1c73b758cfa00d80c 205 SUPERFAMILY SSF52218 4 180 1.38E-50 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Vc3S01_2374 711ea73b61b061dd7c476dd1e2d0eddc 250 SUPERFAMILY SSF53474 2 248 8.44E-36 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_2374 711ea73b61b061dd7c476dd1e2d0eddc 250 Gene3D G3DSA:3.40.50.1820 1 244 1.1E-40 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_2374 711ea73b61b061dd7c476dd1e2d0eddc 250 Pfam PF00561 alpha/beta hydrolase fold 20 108 4.2E-14 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Vc3S01_p40114 e764294b42889149eaec7c8710c42936 120 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 95 6.6E-31 T 12-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 Vc3S01_p40114 e764294b42889149eaec7c8710c42936 120 Pfam PF00436 Single-strand binding protein family 6 93 4.0E-28 T 12-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 Vc3S01_p40114 e764294b42889149eaec7c8710c42936 120 Gene3D G3DSA:2.40.50.140 1 110 4.7E-33 T 12-10-2018 Vc3S01_p40114 e764294b42889149eaec7c8710c42936 120 SUPERFAMILY SSF50249 5 93 7.88E-29 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Vc3S01_2367 89dd7bc15cfdfefae5c048e25525096d 323 Gene3D G3DSA:1.10.530.10 66 318 1.9E-93 T 12-10-2018 Vc3S01_2367 89dd7bc15cfdfefae5c048e25525096d 323 SUPERFAMILY SSF53955 9 321 2.06E-101 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily Vc3S01_2367 89dd7bc15cfdfefae5c048e25525096d 323 Gene3D G3DSA:1.10.8.350 35 199 1.9E-93 T 12-10-2018 Vc3S01_2367 89dd7bc15cfdfefae5c048e25525096d 323 Pfam PF13406 Transglycosylase SLT domain 24 319 7.9E-111 T 12-10-2018 IPR031304 Transglycosylase SLT domain 2 Vc3S01_2367 89dd7bc15cfdfefae5c048e25525096d 323 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 24 322 8.4E-112 T 12-10-2018 IPR011970 Lytic murein transglycosylase Vc3S01_2616 dfc2497efd668550a528a5dc162d2f2a 515 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 86 101 - T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Vc3S01_2616 dfc2497efd668550a528a5dc162d2f2a 515 PRINTS PR00175 Sodium/alanine symporter signature 304 322 4.5E-57 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Vc3S01_2616 dfc2497efd668550a528a5dc162d2f2a 515 PRINTS PR00175 Sodium/alanine symporter signature 217 236 4.5E-57 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Vc3S01_2616 dfc2497efd668550a528a5dc162d2f2a 515 PRINTS PR00175 Sodium/alanine symporter signature 189 207 4.5E-57 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Vc3S01_2616 dfc2497efd668550a528a5dc162d2f2a 515 PRINTS PR00175 Sodium/alanine symporter signature 365 387 4.5E-57 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Vc3S01_2616 dfc2497efd668550a528a5dc162d2f2a 515 PRINTS PR00175 Sodium/alanine symporter signature 428 448 4.5E-57 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Vc3S01_2616 dfc2497efd668550a528a5dc162d2f2a 515 PRINTS PR00175 Sodium/alanine symporter signature 86 108 4.5E-57 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Vc3S01_2616 dfc2497efd668550a528a5dc162d2f2a 515 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 462 5.5E-135 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Vc3S01_2616 dfc2497efd668550a528a5dc162d2f2a 515 Pfam PF01235 Sodium:alanine symporter family 51 472 1.8E-148 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Vc3S01_A0462 f28d87fada8a909cd5f7cc25c19b76e6 249 SUPERFAMILY SSF52540 5 235 3.36E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A0462 f28d87fada8a909cd5f7cc25c19b76e6 249 Pfam PF00005 ABC transporter 19 174 9.8E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_A0462 f28d87fada8a909cd5f7cc25c19b76e6 249 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 4 249 2.2E-126 T 12-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 Vc3S01_A0462 f28d87fada8a909cd5f7cc25c19b76e6 249 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_A0462 f28d87fada8a909cd5f7cc25c19b76e6 249 SMART SM00382 28 220 1.5E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_A0462 f28d87fada8a909cd5f7cc25c19b76e6 249 Gene3D G3DSA:3.40.50.300 4 246 2.1E-62 T 12-10-2018 Vc3S01_A0973 93181e56afa4ba7a2978f0fc2dc837db 441 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 280 440 2.7E-39 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A0973 93181e56afa4ba7a2978f0fc2dc837db 441 Pfam PF03924 CHASE domain 99 183 2.8E-7 T 12-10-2018 IPR006189 CHASE domain Vc3S01_A0973 93181e56afa4ba7a2978f0fc2dc837db 441 SMART SM00267 274 440 1.4E-44 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A0973 93181e56afa4ba7a2978f0fc2dc837db 441 SUPERFAMILY SSF55073 289 439 2.12E-41 T 12-10-2018 IPR029787 Nucleotide cyclase Vc3S01_A0973 93181e56afa4ba7a2978f0fc2dc837db 441 Pfam PF00990 Diguanylate cyclase, GGDEF domain 284 436 4.9E-34 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A0973 93181e56afa4ba7a2978f0fc2dc837db 441 Gene3D G3DSA:3.30.70.270 279 440 3.2E-47 T 12-10-2018 Vc3S01_A0973 93181e56afa4ba7a2978f0fc2dc837db 441 SMART SM01079 49 208 9.2E-4 T 12-10-2018 IPR006189 CHASE domain Vc3S01_0441 25637a3e9e616ebff83f62fcd8419915 150 Gene3D G3DSA:3.40.50.10110 1 147 2.9E-43 T 12-10-2018 IPR036768 DNA polymerase III subunit chi superfamily Vc3S01_0441 25637a3e9e616ebff83f62fcd8419915 150 SUPERFAMILY SSF102400 2 146 1.1E-41 T 12-10-2018 IPR036768 DNA polymerase III subunit chi superfamily Vc3S01_0441 25637a3e9e616ebff83f62fcd8419915 150 Pfam PF04364 DNA polymerase III chi subunit, HolC 2 143 5.2E-33 T 12-10-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 Vc3S01_0594 f3a79b6a628384cb3e63f6fffbc3aad1 343 Pfam PF08402 TOBE domain 276 341 1.4E-7 T 12-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Vc3S01_0594 f3a79b6a628384cb3e63f6fffbc3aad1 343 SUPERFAMILY SSF52540 5 243 1.57E-79 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0594 f3a79b6a628384cb3e63f6fffbc3aad1 343 Pfam PF00005 ABC transporter 20 164 1.4E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_0594 f3a79b6a628384cb3e63f6fffbc3aad1 343 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_0594 f3a79b6a628384cb3e63f6fffbc3aad1 343 SMART SM00382 29 214 1.7E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_0594 f3a79b6a628384cb3e63f6fffbc3aad1 343 Gene3D G3DSA:3.40.50.300 1 240 1.0E-74 T 12-10-2018 Vc3S01_0594 f3a79b6a628384cb3e63f6fffbc3aad1 343 SUPERFAMILY SSF50331 263 342 2.66E-9 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Vc3S01_A0829 eacff3bc845b285028111bd861e8d2a2 332 Pfam PF07745 Glycosyl hydrolase family 53 24 272 8.3E-81 T 12-10-2018 IPR011683 Glycosyl hydrolase family 53 GO:0015926 Vc3S01_A0829 eacff3bc845b285028111bd861e8d2a2 332 Pfam PF07745 Glycosyl hydrolase family 53 277 309 8.7E-6 T 12-10-2018 IPR011683 Glycosyl hydrolase family 53 GO:0015926 Vc3S01_A0829 eacff3bc845b285028111bd861e8d2a2 332 Gene3D G3DSA:3.20.20.80 13 328 7.6E-102 T 12-10-2018 Vc3S01_A0829 eacff3bc845b285028111bd861e8d2a2 332 SUPERFAMILY SSF51445 13 330 7.28E-81 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily Vc3S01_2635 a7b72f6069c543b0b6db03029524f56e 64 SUPERFAMILY SSF140319 1 62 2.09E-28 T 12-10-2018 IPR036762 IscX-like superfamily Vc3S01_2635 a7b72f6069c543b0b6db03029524f56e 64 Pfam PF04384 Iron-sulphur cluster assembly 1 63 4.2E-34 T 12-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 Vc3S01_2635 a7b72f6069c543b0b6db03029524f56e 64 Gene3D G3DSA:1.10.10.600 1 64 1.4E-29 T 12-10-2018 IPR036762 IscX-like superfamily Vc3S01_2635 a7b72f6069c543b0b6db03029524f56e 64 PIRSF PIRSF039003 1 64 5.0E-34 T 12-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 Vc3S01_2635 a7b72f6069c543b0b6db03029524f56e 64 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 2 64 4.2E-35 T 12-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 Vc3S01_1483 1226045e5c0f98cff121bddea7fb228f 186 PIRSF PIRSF009320 17 179 3.5E-27 T 12-10-2018 Vc3S01_1483 1226045e5c0f98cff121bddea7fb228f 186 Gene3D G3DSA:3.40.50.300 18 183 5.8E-30 T 12-10-2018 Vc3S01_1483 1226045e5c0f98cff121bddea7fb228f 186 SUPERFAMILY SSF52540 17 170 9.89E-25 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_1483 1226045e5c0f98cff121bddea7fb228f 186 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 20 174 5.3E-11 T 12-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Vc3S01_A1487 2e2f8710e8e1bb8cd50e26eef3063fbe 564 SUPERFAMILY SSF53738 28 232 5.49E-45 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Vc3S01_A1487 2e2f8710e8e1bb8cd50e26eef3063fbe 564 SUPERFAMILY SSF55957 432 554 1.96E-15 T 12-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Vc3S01_A1487 2e2f8710e8e1bb8cd50e26eef3063fbe 564 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 139 148 - T 12-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Vc3S01_A1487 2e2f8710e8e1bb8cd50e26eef3063fbe 564 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 207 309 2.8E-25 T 12-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Vc3S01_A1487 2e2f8710e8e1bb8cd50e26eef3063fbe 564 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 486 533 2.3E-9 T 12-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Vc3S01_A1487 2e2f8710e8e1bb8cd50e26eef3063fbe 564 Gene3D G3DSA:3.40.120.10 203 321 8.3E-22 T 12-10-2018 Vc3S01_A1487 2e2f8710e8e1bb8cd50e26eef3063fbe 564 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 41 180 1.5E-41 T 12-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Vc3S01_A1487 2e2f8710e8e1bb8cd50e26eef3063fbe 564 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 321 438 1.8E-16 T 12-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Vc3S01_A1487 2e2f8710e8e1bb8cd50e26eef3063fbe 564 SUPERFAMILY SSF53738 204 311 3.69E-22 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Vc3S01_A1487 2e2f8710e8e1bb8cd50e26eef3063fbe 564 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 226 245 1.8E-8 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Vc3S01_A1487 2e2f8710e8e1bb8cd50e26eef3063fbe 564 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 293 308 1.8E-8 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Vc3S01_A1487 2e2f8710e8e1bb8cd50e26eef3063fbe 564 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 138 152 1.8E-8 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Vc3S01_A1487 2e2f8710e8e1bb8cd50e26eef3063fbe 564 Gene3D G3DSA:3.40.120.10 322 441 3.9E-28 T 12-10-2018 Vc3S01_A1487 2e2f8710e8e1bb8cd50e26eef3063fbe 564 SUPERFAMILY SSF53738 301 443 9.03E-30 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Vc3S01_A1487 2e2f8710e8e1bb8cd50e26eef3063fbe 564 Gene3D G3DSA:3.30.310.50 445 553 1.2E-8 T 12-10-2018 Vc3S01_A1487 2e2f8710e8e1bb8cd50e26eef3063fbe 564 Gene3D G3DSA:3.40.120.10 33 184 3.7E-47 T 12-10-2018 Vc3S01_1609 5614b4560d1e4c19317f81716ec57bce 397 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 169 376 1.4E-30 T 12-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 Vc3S01_1609 5614b4560d1e4c19317f81716ec57bce 397 SUPERFAMILY SSF88697 4 73 3.13E-17 T 12-10-2018 IPR015947 PUA-like superfamily Vc3S01_1609 5614b4560d1e4c19317f81716ec57bce 397 SUPERFAMILY SSF53335 78 393 9.67E-70 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Vc3S01_1609 5614b4560d1e4c19317f81716ec57bce 397 Gene3D G3DSA:3.40.50.150 181 396 2.4E-69 T 12-10-2018 Vc3S01_1609 5614b4560d1e4c19317f81716ec57bce 397 Gene3D G3DSA:2.30.130.10 1 72 6.3E-29 T 12-10-2018 IPR036974 PUA domain superfamily GO:0003723 Vc3S01_1609 5614b4560d1e4c19317f81716ec57bce 397 Gene3D G3DSA:3.30.750.80 73 180 2.9E-35 T 12-10-2018 Vc3S01_1609 5614b4560d1e4c19317f81716ec57bce 397 Hamap MF_01857 Ribosomal RNA large subunit methyltransferase I [rlmI]. 1 397 68.422 T 12-10-2018 IPR023542 rRNA large subunit methyltransferase I GO:0008649 Vc3S01_1609 5614b4560d1e4c19317f81716ec57bce 397 SMART SM00359 3 86 8.2E-13 T 12-10-2018 IPR002478 PUA domain GO:0003723 Vc3S01_A1264 b88d79e4d4df123d2809dcd774e120e2 292 TIGRFAM TIGR00688 rarD: protein RarD 2 250 1.6E-48 T 12-10-2018 IPR004626 RarD protein GO:0005887 Vc3S01_A1264 b88d79e4d4df123d2809dcd774e120e2 292 SUPERFAMILY SSF103481 198 276 1.96E-7 T 12-10-2018 Vc3S01_A1264 b88d79e4d4df123d2809dcd774e120e2 292 SUPERFAMILY SSF103481 39 134 1.09E-12 T 12-10-2018 Vc3S01_A1264 b88d79e4d4df123d2809dcd774e120e2 292 Pfam PF00892 EamA-like transporter family 2 132 1.3E-12 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Vc3S01_0211 bc7f72e305b5bd32f591875d7b3f91e0 159 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 156 32.972 T 12-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 Vc3S01_0211 bc7f72e305b5bd32f591875d7b3f91e0 159 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 157 3.8E-59 T 12-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 Vc3S01_0211 bc7f72e305b5bd32f591875d7b3f91e0 159 Gene3D G3DSA:3.40.1280.10 1 159 1.7E-65 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Vc3S01_0211 bc7f72e305b5bd32f591875d7b3f91e0 159 PIRSF PIRSF029256 1 159 6.0E-67 T 12-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 Vc3S01_0211 bc7f72e305b5bd32f591875d7b3f91e0 159 SUPERFAMILY SSF75217 2 157 1.05E-43 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases Vc3S01_0211 bc7f72e305b5bd32f591875d7b3f91e0 159 Pfam PF00588 SpoU rRNA Methylase family 3 146 1.8E-34 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 Vc3S01_1352 802a028d52a6426b02413c8bdf4ddb36 105 Pfam PF01845 CcdB protein 3 104 2.2E-34 T 12-10-2018 IPR002712 Toxin CcdB GO:0006276|GO:0008657 Vc3S01_1352 802a028d52a6426b02413c8bdf4ddb36 105 SUPERFAMILY SSF50118 3 105 5.04E-31 T 12-10-2018 Vc3S01_1352 802a028d52a6426b02413c8bdf4ddb36 105 Gene3D G3DSA:2.30.30.110 1 105 5.6E-40 T 12-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor Vc3S01_1352 802a028d52a6426b02413c8bdf4ddb36 105 ProDom PD012578 PLASMID TOXIN CCDB CYTOTOXIC LETB POST-SEGREGATION SYSTEM CCDB-LIKE GYRASE FUSED-CCDB 18 104 6.0E-41 T 12-10-2018 IPR002712 Toxin CcdB GO:0006276|GO:0008657 Vc3S01_2293 86d5b236371ab82bec674503717ab812 155 SUPERFAMILY SSF54909 63 152 1.34E-20 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel Vc3S01_2293 86d5b236371ab82bec674503717ab812 155 Gene3D G3DSA:1.10.10.10 4 55 2.6E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_2293 86d5b236371ab82bec674503717ab812 155 Pfam PF01037 Lrp/AsnC ligand binding domain 69 142 6.2E-22 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Vc3S01_2293 86d5b236371ab82bec674503717ab812 155 SMART SM00344 3 112 1.4E-45 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 Vc3S01_2293 86d5b236371ab82bec674503717ab812 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 5.0E-13 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Vc3S01_2293 86d5b236371ab82bec674503717ab812 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 5.0E-13 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Vc3S01_2293 86d5b236371ab82bec674503717ab812 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 5.0E-13 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Vc3S01_2293 86d5b236371ab82bec674503717ab812 155 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 12-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site Vc3S01_2293 86d5b236371ab82bec674503717ab812 155 SUPERFAMILY SSF46785 2 92 1.48E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_2293 86d5b236371ab82bec674503717ab812 155 Gene3D G3DSA:3.30.70.920 56 140 1.8E-22 T 12-10-2018 Vc3S01_2293 86d5b236371ab82bec674503717ab812 155 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 50 2.5E-18 T 12-10-2018 Vc3S01_2951 811077a9611434b5f389999ac410d4d9 175 Gene3D G3DSA:3.50.30.40 1 161 1.0E-61 T 12-10-2018 Vc3S01_2951 811077a9611434b5f389999ac410d4d9 175 SUPERFAMILY SSF89562 2 158 2.09E-47 T 12-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily Vc3S01_2951 811077a9611434b5f389999ac410d4d9 175 TIGRFAM TIGR02998 RraA_entero: regulator of ribonuclease activity A 1 160 3.5E-83 T 12-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 Vc3S01_2951 811077a9611434b5f389999ac410d4d9 175 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 4.1E-68 T 12-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 Vc3S01_2951 811077a9611434b5f389999ac410d4d9 175 Pfam PF03737 Aldolase/RraA 6 152 9.8E-40 T 12-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein Vc3S01_2951 811077a9611434b5f389999ac410d4d9 175 Hamap MF_00471 Regulator of ribonuclease activity A [rraA]. 1 161 47.875 T 12-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 Vc3S01_A1116 983c25fb4adf4fee7e601ed116a2eb14 484 SMART SM00388 276 343 5.0E-5 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_A1116 983c25fb4adf4fee7e601ed116a2eb14 484 SUPERFAMILY SSF47384 271 340 6.47E-7 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Vc3S01_A1116 983c25fb4adf4fee7e601ed116a2eb14 484 SMART SM00387 381 479 3.4E-13 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_A1116 983c25fb4adf4fee7e601ed116a2eb14 484 Pfam PF00512 His Kinase A (phospho-acceptor) domain 281 332 2.6E-6 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_A1116 983c25fb4adf4fee7e601ed116a2eb14 484 Pfam PF11884 Domain of unknown function (DUF3404) 17 275 1.1E-111 T 12-10-2018 IPR021821 Protein of unknown function DUF3404 Vc3S01_A1116 983c25fb4adf4fee7e601ed116a2eb14 484 Gene3D G3DSA:1.10.287.130 283 340 1.1E-17 T 12-10-2018 Vc3S01_A1116 983c25fb4adf4fee7e601ed116a2eb14 484 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 386 477 2.9E-8 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_A1116 983c25fb4adf4fee7e601ed116a2eb14 484 SUPERFAMILY SSF55874 347 479 4.19E-18 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_A1116 983c25fb4adf4fee7e601ed116a2eb14 484 Gene3D G3DSA:3.30.565.10 341 476 1.1E-17 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_2776 2827c0c35767aba19d03d840e9856d8d 485 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 22 479 43.868 T 12-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Vc3S01_2776 2827c0c35767aba19d03d840e9856d8d 485 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 25 473 1.0E-187 T 12-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Vc3S01_2776 2827c0c35767aba19d03d840e9856d8d 485 Pfam PF08245 Mur ligase middle domain 127 307 6.4E-29 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Vc3S01_2776 2827c0c35767aba19d03d840e9856d8d 485 Gene3D G3DSA:3.90.190.20 326 482 2.2E-49 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Vc3S01_2776 2827c0c35767aba19d03d840e9856d8d 485 Pfam PF02875 Mur ligase family, glutamate ligase domain 329 417 3.5E-21 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Vc3S01_2776 2827c0c35767aba19d03d840e9856d8d 485 Gene3D G3DSA:3.40.1190.10 111 325 5.4E-85 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Vc3S01_2776 2827c0c35767aba19d03d840e9856d8d 485 Pfam PF01225 Mur ligase family, catalytic domain 25 121 1.3E-28 T 12-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 Vc3S01_2776 2827c0c35767aba19d03d840e9856d8d 485 SUPERFAMILY SSF51984 23 109 1.57E-29 T 12-10-2018 Vc3S01_2776 2827c0c35767aba19d03d840e9856d8d 485 Gene3D G3DSA:3.40.50.720 23 110 5.2E-34 T 12-10-2018 Vc3S01_2776 2827c0c35767aba19d03d840e9856d8d 485 SUPERFAMILY SSF53244 326 474 2.75E-48 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Vc3S01_2776 2827c0c35767aba19d03d840e9856d8d 485 SUPERFAMILY SSF53623 108 322 2.09E-72 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Vc3S01_2841 7689a74635327607b0ce75bf8b2a11f8 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 224 1.6E-26 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Vc3S01_2841 7689a74635327607b0ce75bf8b2a11f8 229 Gene3D G3DSA:1.10.10.10 126 229 1.5E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_2841 7689a74635327607b0ce75bf8b2a11f8 229 Pfam PF00072 Response regulator receiver domain 4 113 9.8E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_2841 7689a74635327607b0ce75bf8b2a11f8 229 Gene3D G3DSA:3.40.50.2300 1 122 1.5E-36 T 12-10-2018 Vc3S01_2841 7689a74635327607b0ce75bf8b2a11f8 229 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 224 4.9E-99 T 12-10-2018 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 Vc3S01_2841 7689a74635327607b0ce75bf8b2a11f8 229 SUPERFAMILY SSF52172 2 179 5.43E-38 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_2841 7689a74635327607b0ce75bf8b2a11f8 229 SMART SM00448 1 112 1.1E-39 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_2841 7689a74635327607b0ce75bf8b2a11f8 229 SMART SM00862 149 224 4.1E-26 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Vc3S01_A1220 9e2c6075be28a90fe44acefab43907b1 607 Pfam PF05947 Type VI secretion system, TssF 6 606 1.9E-172 T 12-10-2018 IPR010272 Type VI secretion system, TssF-like Vc3S01_A1220 9e2c6075be28a90fe44acefab43907b1 607 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 5 607 9.8E-189 T 12-10-2018 IPR010272 Type VI secretion system, TssF-like Vc3S01_A1220 9e2c6075be28a90fe44acefab43907b1 607 PIRSF PIRSF028304 1 607 8.2E-148 T 12-10-2018 IPR010272 Type VI secretion system, TssF-like Vc3S01_2109 705f75d91a4a28c00e0a42455a442109 150 SMART SM00347 33 134 2.6E-18 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Vc3S01_2109 705f75d91a4a28c00e0a42455a442109 150 Pfam PF01047 MarR family 46 97 9.9E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Vc3S01_2109 705f75d91a4a28c00e0a42455a442109 150 Gene3D G3DSA:1.10.10.10 2 146 7.6E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_2109 705f75d91a4a28c00e0a42455a442109 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 124 144 3.3E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Vc3S01_2109 705f75d91a4a28c00e0a42455a442109 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 94 110 3.3E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Vc3S01_2109 705f75d91a4a28c00e0a42455a442109 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 58 74 3.3E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Vc3S01_2109 705f75d91a4a28c00e0a42455a442109 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 75 90 3.3E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Vc3S01_2109 705f75d91a4a28c00e0a42455a442109 150 ProSitePatterns PS01117 MarR-type HTH domain signature. 72 107 - T 12-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site Vc3S01_2109 705f75d91a4a28c00e0a42455a442109 150 SUPERFAMILY SSF46785 6 145 5.97E-26 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A2020 cde18bd9d3997b1864bd8a712685ecb5 158 Gene3D G3DSA:3.30.70.920 57 151 5.2E-26 T 12-10-2018 Vc3S01_A2020 cde18bd9d3997b1864bd8a712685ecb5 158 SMART SM00344 5 114 1.0E-44 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 Vc3S01_A2020 cde18bd9d3997b1864bd8a712685ecb5 158 Gene3D G3DSA:1.10.10.10 1 56 2.6E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A2020 cde18bd9d3997b1864bd8a712685ecb5 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 5 21 2.1E-15 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Vc3S01_A2020 cde18bd9d3997b1864bd8a712685ecb5 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 21 32 2.1E-15 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Vc3S01_A2020 cde18bd9d3997b1864bd8a712685ecb5 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 32 51 2.1E-15 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Vc3S01_A2020 cde18bd9d3997b1864bd8a712685ecb5 158 Pfam PF01037 Lrp/AsnC ligand binding domain 71 145 4.0E-22 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Vc3S01_A2020 cde18bd9d3997b1864bd8a712685ecb5 158 SUPERFAMILY SSF46785 3 64 3.5E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A2020 cde18bd9d3997b1864bd8a712685ecb5 158 SUPERFAMILY SSF54909 65 150 1.74E-20 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel Vc3S01_A2020 cde18bd9d3997b1864bd8a712685ecb5 158 ProSitePatterns PS00519 AsnC-type HTH domain signature. 23 49 - T 12-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site Vc3S01_A2020 cde18bd9d3997b1864bd8a712685ecb5 158 Pfam PF13412 Winged helix-turn-helix DNA-binding 5 51 5.6E-17 T 12-10-2018 Vc3S01_A1241 faab280e5bace245d9ccd51210ca61a0 366 SUPERFAMILY SSF51395 3 364 4.23E-126 T 12-10-2018 Vc3S01_A1241 faab280e5bace245d9ccd51210ca61a0 366 Gene3D G3DSA:3.20.20.70 1 365 1.1E-142 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_A1241 faab280e5bace245d9ccd51210ca61a0 366 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 340 6.4E-99 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 Vc3S01_A1195 4aab2fa8d96ced0a761b504e293ada8f 334 PIRSF PIRSF017617 1 334 2.7E-134 T 12-10-2018 IPR023603 Threonine aldolase Vc3S01_A1195 4aab2fa8d96ced0a761b504e293ada8f 334 Gene3D G3DSA:3.40.640.10 1 243 1.4E-96 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Vc3S01_A1195 4aab2fa8d96ced0a761b504e293ada8f 334 Pfam PF01212 Beta-eliminating lyase 2 283 1.0E-100 T 12-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 Vc3S01_A1195 4aab2fa8d96ced0a761b504e293ada8f 334 SUPERFAMILY SSF53383 1 332 8.87E-118 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Vc3S01_A1195 4aab2fa8d96ced0a761b504e293ada8f 334 Gene3D G3DSA:3.90.1150.10 244 334 7.8E-25 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Vc3S01_A0730 7b2c209fd8917ddb486a7e846a9a5208 246 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 3 245 1.8E-115 T 12-10-2018 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|MetaCyc: PWY-7948 Vc3S01_A0730 7b2c209fd8917ddb486a7e846a9a5208 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 3.2E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A0730 7b2c209fd8917ddb486a7e846a9a5208 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 3.2E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A0730 7b2c209fd8917ddb486a7e846a9a5208 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 3.2E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A0730 7b2c209fd8917ddb486a7e846a9a5208 246 Gene3D G3DSA:3.40.50.720 1 245 2.6E-76 T 12-10-2018 Vc3S01_A0730 7b2c209fd8917ddb486a7e846a9a5208 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 184 9.7E-4 T 12-10-2018 Vc3S01_A0730 7b2c209fd8917ddb486a7e846a9a5208 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 2.2E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A0730 7b2c209fd8917ddb486a7e846a9a5208 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 2.2E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A0730 7b2c209fd8917ddb486a7e846a9a5208 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.2E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A0730 7b2c209fd8917ddb486a7e846a9a5208 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 2.2E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A0730 7b2c209fd8917ddb486a7e846a9a5208 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 2.2E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A0730 7b2c209fd8917ddb486a7e846a9a5208 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.2E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A0730 7b2c209fd8917ddb486a7e846a9a5208 246 SUPERFAMILY SSF51735 2 245 1.27E-78 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_A0730 7b2c209fd8917ddb486a7e846a9a5208 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 243 9.1E-59 T 12-10-2018 Vc3S01_A0730 7b2c209fd8917ddb486a7e846a9a5208 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Vc3S01_A1346 6338c1b9a4fdcd3fc6be1f97f3d42a3c 183 Pfam PF14316 Domain of unknown function (DUF4381) 15 156 3.0E-24 T 12-10-2018 IPR025489 Protein of unknown function (DUF4381 Vc3S01_0827 19b90546298c993f2041c8165b84dd44 292 PIRSF PIRSF001365 1 292 2.0E-96 T 12-10-2018 IPR002220 DapA-like GO:0016829 Vc3S01_0827 19b90546298c993f2041c8165b84dd44 292 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 4 288 1.0E-117 T 12-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Vc3S01_0827 19b90546298c993f2041c8165b84dd44 292 SMART SM01130 1 290 3.7E-142 T 12-10-2018 IPR002220 DapA-like GO:0016829 Vc3S01_0827 19b90546298c993f2041c8165b84dd44 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 2.6E-35 T 12-10-2018 IPR002220 DapA-like GO:0016829 Vc3S01_0827 19b90546298c993f2041c8165b84dd44 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 2.6E-35 T 12-10-2018 IPR002220 DapA-like GO:0016829 Vc3S01_0827 19b90546298c993f2041c8165b84dd44 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 2.6E-35 T 12-10-2018 IPR002220 DapA-like GO:0016829 Vc3S01_0827 19b90546298c993f2041c8165b84dd44 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 2.6E-35 T 12-10-2018 IPR002220 DapA-like GO:0016829 Vc3S01_0827 19b90546298c993f2041c8165b84dd44 292 Pfam PF00701 Dihydrodipicolinate synthetase family 2 287 1.4E-109 T 12-10-2018 IPR002220 DapA-like GO:0016829 Vc3S01_0827 19b90546298c993f2041c8165b84dd44 292 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 288 65.575 T 12-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Vc3S01_0827 19b90546298c993f2041c8165b84dd44 292 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 12-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 Vc3S01_0827 19b90546298c993f2041c8165b84dd44 292 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 12-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Vc3S01_0827 19b90546298c993f2041c8165b84dd44 292 Gene3D G3DSA:3.20.20.70 1 292 8.2E-112 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_0827 19b90546298c993f2041c8165b84dd44 292 SUPERFAMILY SSF51569 2 290 1.36E-101 T 12-10-2018 Vc3S01_A2003 0043fb8bfa5e0fe0fc5f9b289a4993eb 263 SMART SM00895 102 229 1.5E-20 T 12-10-2018 IPR011711 GntR, C-terminal Vc3S01_A2003 0043fb8bfa5e0fe0fc5f9b289a4993eb 263 SMART SM00345 21 80 7.5E-23 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Vc3S01_A2003 0043fb8bfa5e0fe0fc5f9b289a4993eb 263 Gene3D G3DSA:1.10.10.10 12 83 1.2E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A2003 0043fb8bfa5e0fe0fc5f9b289a4993eb 263 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 54 70 3.9E-8 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Vc3S01_A2003 0043fb8bfa5e0fe0fc5f9b289a4993eb 263 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 54 3.9E-8 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Vc3S01_A2003 0043fb8bfa5e0fe0fc5f9b289a4993eb 263 Pfam PF07729 FCD domain 102 228 2.4E-21 T 12-10-2018 IPR011711 GntR, C-terminal Vc3S01_A2003 0043fb8bfa5e0fe0fc5f9b289a4993eb 263 SUPERFAMILY SSF46785 14 107 5.06E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A2003 0043fb8bfa5e0fe0fc5f9b289a4993eb 263 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 80 1.5E-21 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Vc3S01_A2003 0043fb8bfa5e0fe0fc5f9b289a4993eb 263 SUPERFAMILY SSF48008 100 237 1.23E-27 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Vc3S01_A2003 0043fb8bfa5e0fe0fc5f9b289a4993eb 263 Gene3D G3DSA:1.20.120.530 101 238 2.9E-24 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Vc3S01_A0509 161a9ab2689b4dd03c82935f98b770c7 635 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 5 131 3.2E-42 T 12-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 Vc3S01_A0509 161a9ab2689b4dd03c82935f98b770c7 635 SUPERFAMILY SSF55804 1 145 3.27E-38 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 Vc3S01_A0509 161a9ab2689b4dd03c82935f98b770c7 635 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 165 247 3.1E-31 T 12-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 Vc3S01_A0509 161a9ab2689b4dd03c82935f98b770c7 635 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 167 255 1.4E-15 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 Vc3S01_A0509 161a9ab2689b4dd03c82935f98b770c7 635 Gene3D G3DSA:3.40.930.10 1 147 4.7E-41 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 Vc3S01_A0509 161a9ab2689b4dd03c82935f98b770c7 635 SUPERFAMILY SSF52794 164 259 3.66E-35 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 Vc3S01_A0509 161a9ab2689b4dd03c82935f98b770c7 635 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 278 620 3.2E-87 T 12-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 Vc3S01_A0509 161a9ab2689b4dd03c82935f98b770c7 635 Gene3D G3DSA:3.40.50.2300 154 263 6.8E-40 T 12-10-2018 Vc3S01_A0509 161a9ab2689b4dd03c82935f98b770c7 635 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 146 7.6E-35 T 12-10-2018 IPR002178 PTS EIIA type-2 domain Vc3S01_A0509 161a9ab2689b4dd03c82935f98b770c7 635 Pfam PF02378 Phosphotransferase system, EIIC 292 567 2.5E-16 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 Vc3S01_A0545 d9a4d912bf2679e26a2e3f58a566f63e 342 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 4 342 2.9E-137 T 12-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Vc3S01_A0545 d9a4d912bf2679e26a2e3f58a566f63e 342 Gene3D G3DSA:3.20.20.140 2 342 2.2E-111 T 12-10-2018 Vc3S01_A0545 d9a4d912bf2679e26a2e3f58a566f63e 342 PIRSF PIRSF001237 1 342 7.9E-143 T 12-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Vc3S01_A0545 d9a4d912bf2679e26a2e3f58a566f63e 342 Pfam PF01979 Amidohydrolase family 11 309 9.3E-19 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Vc3S01_A0545 d9a4d912bf2679e26a2e3f58a566f63e 342 ProSitePatterns PS00482 Dihydroorotase signature 1. 11 19 - T 12-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Vc3S01_A0545 d9a4d912bf2679e26a2e3f58a566f63e 342 ProSitePatterns PS00483 Dihydroorotase signature 2. 244 255 - T 12-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Vc3S01_A0545 d9a4d912bf2679e26a2e3f58a566f63e 342 Hamap MF_00219 Dihydroorotase [pyrC]. 2 342 46.775 T 12-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Vc3S01_A0545 d9a4d912bf2679e26a2e3f58a566f63e 342 SUPERFAMILY SSF51556 1 341 2.19E-146 T 12-10-2018 IPR032466 Metal-dependent hydrolase Vc3S01_1568 6ab200bb062b1f21aa1f0348bc02b9f1 417 Gene3D G3DSA:1.25.40.590 48 204 3.4E-38 T 12-10-2018 IPR038522 Type IV / VI secretion system, DotU superfamily Vc3S01_1568 6ab200bb062b1f21aa1f0348bc02b9f1 417 Pfam PF05036 Sporulation related domain 336 387 2.0E-5 T 12-10-2018 IPR007730 Sporulation-like domain GO:0042834 Vc3S01_1568 6ab200bb062b1f21aa1f0348bc02b9f1 417 SUPERFAMILY SSF110997 336 393 2.35E-6 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Vc3S01_1568 6ab200bb062b1f21aa1f0348bc02b9f1 417 Pfam PF09850 Type VI secretion system protein DotU 53 253 4.6E-38 T 12-10-2018 IPR017732 Type IV / VI secretion system, DotU Vc3S01_1568 6ab200bb062b1f21aa1f0348bc02b9f1 417 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 51 253 4.9E-36 T 12-10-2018 IPR017732 Type IV / VI secretion system, DotU Vc3S01_A1331 117ea214702e90df9ec8e92fef868339 300 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 3 292 6.3E-69 T 12-10-2018 IPR005218 Diacylglycerol/lipid kinase Vc3S01_A1331 117ea214702e90df9ec8e92fef868339 300 Pfam PF00781 Diacylglycerol kinase catalytic domain 10 125 1.6E-26 T 12-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 Vc3S01_A1331 117ea214702e90df9ec8e92fef868339 300 SMART SM00046 3 130 1.9E-10 T 12-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 Vc3S01_A1331 117ea214702e90df9ec8e92fef868339 300 Gene3D G3DSA:3.40.50.10330 23 285 2.9E-76 T 12-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 Vc3S01_A1331 117ea214702e90df9ec8e92fef868339 300 Hamap MF_01377 Probable lipid kinase YegS [yegS]. 3 298 43.489 T 12-10-2018 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 Vc3S01_A1331 117ea214702e90df9ec8e92fef868339 300 Gene3D G3DSA:2.60.200.40 123 283 2.9E-76 T 12-10-2018 Vc3S01_A1331 117ea214702e90df9ec8e92fef868339 300 SUPERFAMILY SSF111331 5 295 8.5E-71 T 12-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily Vc3S01_A1908 366a530b07bd8415731aba8ca1b76642 266 Gene3D G3DSA:2.40.30.10 7 90 4.9E-6 T 12-10-2018 Vc3S01_A1908 366a530b07bd8415731aba8ca1b76642 266 PIRSF PIRSF006816 7 266 1.6E-69 T 12-10-2018 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 Vc3S01_A1908 366a530b07bd8415731aba8ca1b76642 266 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 229 259 1.0E-9 T 12-10-2018 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain Vc3S01_A1908 366a530b07bd8415731aba8ca1b76642 266 SUPERFAMILY SSF52343 103 244 1.83E-29 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Vc3S01_A1908 366a530b07bd8415731aba8ca1b76642 266 SUPERFAMILY SSF63380 9 97 4.99E-13 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Vc3S01_A1908 366a530b07bd8415731aba8ca1b76642 266 Gene3D G3DSA:3.40.50.80 91 226 3.1E-20 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Vc3S01_A1908 366a530b07bd8415731aba8ca1b76642 266 TIGRFAM TIGR02911 sulfite_red_B: sulfite reductase, subunit B 6 266 1.7E-115 T 12-10-2018 IPR014260 Sulphite reductase, subunit B Vc3S01_A1908 366a530b07bd8415731aba8ca1b76642 266 Pfam PF00175 Oxidoreductase NAD-binding domain 110 211 2.4E-15 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 Vc3S01_A2016 e60e90a7676fe6b4a6f5513865d9d08c 333 Gene3D G3DSA:3.75.10.10 24 321 7.5E-44 T 12-10-2018 Vc3S01_A2016 e60e90a7676fe6b4a6f5513865d9d08c 333 Pfam PF02274 Amidinotransferase 31 326 8.2E-61 T 12-10-2018 Vc3S01_A2016 e60e90a7676fe6b4a6f5513865d9d08c 333 SUPERFAMILY SSF55909 27 321 1.7E-37 T 12-10-2018 Vc3S01_A2016 e60e90a7676fe6b4a6f5513865d9d08c 333 PIRSF PIRSF028188 8 329 8.5E-155 T 12-10-2018 IPR014541 Predicted amidinotransferase, FN0238 type Vc3S01_0869 52dbbeb67060d577fd8e2feaaf4ac9bb 503 Gene3D G3DSA:1.20.120.1380 265 474 4.7E-57 T 12-10-2018 Vc3S01_0869 52dbbeb67060d577fd8e2feaaf4ac9bb 503 Gene3D G3DSA:3.40.50.300 285 471 4.7E-57 T 12-10-2018 Vc3S01_0869 52dbbeb67060d577fd8e2feaaf4ac9bb 503 SMART SM00962 290 483 2.1E-63 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Vc3S01_0869 52dbbeb67060d577fd8e2feaaf4ac9bb 503 SUPERFAMILY SSF52540 286 478 2.32E-33 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0869 52dbbeb67060d577fd8e2feaaf4ac9bb 503 SMART SM00382 289 442 8.9E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_0869 52dbbeb67060d577fd8e2feaaf4ac9bb 503 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 2 378 1.3E-86 T 12-10-2018 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 Vc3S01_0869 52dbbeb67060d577fd8e2feaaf4ac9bb 503 Pfam PF00448 SRP54-type protein, GTPase domain 292 480 1.4E-38 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Vc3S01_0927 603277e61ef8568528e92af4abf8a317 199 SMART SM00493 81 166 7.3E-17 T 12-10-2018 IPR006171 TOPRIM domain Vc3S01_0927 603277e61ef8568528e92af4abf8a317 199 Gene3D G3DSA:1.10.8.420 1 53 3.5E-19 T 12-10-2018 Vc3S01_0927 603277e61ef8568528e92af4abf8a317 199 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 102.446 T 12-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 Vc3S01_0927 603277e61ef8568528e92af4abf8a317 199 Pfam PF02132 RecR protein 41 77 2.1E-15 T 12-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger Vc3S01_0927 603277e61ef8568528e92af4abf8a317 199 Pfam PF13662 Toprim domain 82 172 3.7E-23 T 12-10-2018 IPR006171 TOPRIM domain Vc3S01_0927 603277e61ef8568528e92af4abf8a317 199 Gene3D G3DSA:3.40.1360.10 78 199 4.7E-39 T 12-10-2018 Vc3S01_0927 603277e61ef8568528e92af4abf8a317 199 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 12-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 Vc3S01_0927 603277e61ef8568528e92af4abf8a317 199 TIGRFAM TIGR00615 recR: recombination protein RecR 3 197 1.3E-78 T 12-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 Vc3S01_0927 603277e61ef8568528e92af4abf8a317 199 SUPERFAMILY SSF111304 2 199 2.35E-72 T 12-10-2018 IPR023627 Recombination protein RecR Vc3S01_A1471 67721135fa7386872b47850f80df16a5 316 TIGRFAM TIGR00874 talAB: transaldolase 3 316 8.1E-154 T 12-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 Vc3S01_A1471 67721135fa7386872b47850f80df16a5 316 SUPERFAMILY SSF51569 1 315 1.47E-113 T 12-10-2018 Vc3S01_A1471 67721135fa7386872b47850f80df16a5 316 Gene3D G3DSA:3.20.20.70 2 316 5.3E-138 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_A1471 67721135fa7386872b47850f80df16a5 316 ProSitePatterns PS00958 Transaldolase active site. 129 146 - T 12-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 Vc3S01_A1471 67721135fa7386872b47850f80df16a5 316 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 14 312 1.1E-100 T 12-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 Vc3S01_A1471 67721135fa7386872b47850f80df16a5 316 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 12-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 Vc3S01_A1471 67721135fa7386872b47850f80df16a5 316 Hamap MF_00492 Transaldolase [tal]. 2 316 50.85 T 12-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 Vc3S01_2201 4681626fd076b942265251a2d66c5dbf 245 Hamap MF_01589 Carboxy-S-adenosyl-L-methionine synthase [cmoA]. 6 245 43.293 T 12-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 Vc3S01_2201 4681626fd076b942265251a2d66c5dbf 245 Gene3D G3DSA:3.40.50.150 21 245 1.1E-64 T 12-10-2018 Vc3S01_2201 4681626fd076b942265251a2d66c5dbf 245 PIRSF PIRSF006325 4 245 8.5E-125 T 12-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 Vc3S01_2201 4681626fd076b942265251a2d66c5dbf 245 Pfam PF13649 Methyltransferase domain 63 161 1.1E-13 T 12-10-2018 Vc3S01_2201 4681626fd076b942265251a2d66c5dbf 245 SUPERFAMILY SSF53335 23 245 4.34E-41 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Vc3S01_2201 4681626fd076b942265251a2d66c5dbf 245 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 8 245 9.1E-118 T 12-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 Vc3S01_A1414 f66e057bcb9f0011586e6274bb860eb3 486 Gene3D G3DSA:3.40.309.10 253 446 9.4E-179 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Vc3S01_A1414 f66e057bcb9f0011586e6274bb860eb3 486 Pfam PF00171 Aldehyde dehydrogenase family 18 474 3.0E-175 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Vc3S01_A1414 f66e057bcb9f0011586e6274bb860eb3 486 SUPERFAMILY SSF53720 5 480 5.11E-170 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Vc3S01_A1414 f66e057bcb9f0011586e6274bb860eb3 486 Gene3D G3DSA:3.40.605.10 18 474 9.4E-179 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Vc3S01_A1414 f66e057bcb9f0011586e6274bb860eb3 486 Hamap MF_00804 NAD/NADP-dependent betaine aldehyde dehydrogenase [betB]. 1 486 57.302 T 12-10-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 Vc3S01_A1414 f66e057bcb9f0011586e6274bb860eb3 486 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 246 253 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 Vc3S01_0230 bd46e2f5a0f793e4421edbed3ef84651 612 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 375 382 8.7E-5 T 12-10-2018 Vc3S01_0230 bd46e2f5a0f793e4421edbed3ef84651 612 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 8.7E-5 T 12-10-2018 Vc3S01_0230 bd46e2f5a0f793e4421edbed3ef84651 612 SUPERFAMILY SSF46977 444 586 6.15E-44 T 12-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Vc3S01_0230 bd46e2f5a0f793e4421edbed3ef84651 612 TIGRFAM TIGR01176 fum_red_Fp: fumarate reductase (quinol), flavoprotein subunit 3 582 0.0 T 12-10-2018 IPR005884 Fumarate reductase, flavoprotein subunit GO:0009061|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.4|KEGG: 00620+1.3.5.4|KEGG: 00650+1.3.5.4|KEGG: 00720+1.3.5.4|MetaCyc: PWY-5392|MetaCyc: PWY-5913|MetaCyc: PWY-7384 Vc3S01_0230 bd46e2f5a0f793e4421edbed3ef84651 612 Pfam PF00890 FAD binding domain 7 397 9.1E-114 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Vc3S01_0230 bd46e2f5a0f793e4421edbed3ef84651 612 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 12-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Vc3S01_0230 bd46e2f5a0f793e4421edbed3ef84651 612 PIRSF PIRSF000171 1 577 1.5E-46 T 12-10-2018 Vc3S01_0230 bd46e2f5a0f793e4421edbed3ef84651 612 SUPERFAMILY SSF51905 3 428 5.5E-74 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_0230 bd46e2f5a0f793e4421edbed3ef84651 612 SUPERFAMILY SSF56425 227 358 2.39E-41 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Vc3S01_0230 bd46e2f5a0f793e4421edbed3ef84651 612 Gene3D G3DSA:3.90.700.10 237 363 5.9E-162 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Vc3S01_0230 bd46e2f5a0f793e4421edbed3ef84651 612 Gene3D G3DSA:4.10.80.40 543 577 6.4E-15 T 12-10-2018 Vc3S01_0230 bd46e2f5a0f793e4421edbed3ef84651 612 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 581 2.0E-236 T 12-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Vc3S01_0230 bd46e2f5a0f793e4421edbed3ef84651 612 Gene3D G3DSA:3.50.50.60 7 409 5.9E-162 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_0230 bd46e2f5a0f793e4421edbed3ef84651 612 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 360 382 5.9E-9 T 12-10-2018 Vc3S01_0230 bd46e2f5a0f793e4421edbed3ef84651 612 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 5.9E-9 T 12-10-2018 Vc3S01_0230 bd46e2f5a0f793e4421edbed3ef84651 612 Gene3D G3DSA:1.20.58.100 424 538 3.4E-35 T 12-10-2018 Vc3S01_0230 bd46e2f5a0f793e4421edbed3ef84651 612 Pfam PF02910 Fumarate reductase flavoprotein C-term 453 581 1.7E-38 T 12-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Vc3S01_1564 888445871788ede821bbc2d0e85fc050 1042 SUPERFAMILY SSF109604 669 752 1.92E-8 T 12-10-2018 Vc3S01_1564 888445871788ede821bbc2d0e85fc050 1042 SMART SM00471 674 985 2.0E-4 T 12-10-2018 IPR003607 HD/PDEase domain Vc3S01_1564 888445871788ede821bbc2d0e85fc050 1042 Gene3D G3DSA:1.10.3210.10 893 1024 4.2E-23 T 12-10-2018 Vc3S01_1564 888445871788ede821bbc2d0e85fc050 1042 Gene3D G3DSA:1.10.3210.10 653 763 5.1E-20 T 12-10-2018 Vc3S01_1564 888445871788ede821bbc2d0e85fc050 1042 SUPERFAMILY SSF53850 293 508 3.17E-27 T 12-10-2018 Vc3S01_1564 888445871788ede821bbc2d0e85fc050 1042 SUPERFAMILY SSF109604 903 1000 8.48E-7 T 12-10-2018 Vc3S01_1564 888445871788ede821bbc2d0e85fc050 1042 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 299 507 3.3E-19 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Vc3S01_1564 888445871788ede821bbc2d0e85fc050 1042 Gene3D G3DSA:3.40.190.10 283 505 5.3E-35 T 12-10-2018 Vc3S01_1564 888445871788ede821bbc2d0e85fc050 1042 SMART SM00062 292 509 1.7E-4 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Vc3S01_1564 888445871788ede821bbc2d0e85fc050 1042 Gene3D G3DSA:3.40.190.10 374 468 5.3E-35 T 12-10-2018 Vc3S01_1564 888445871788ede821bbc2d0e85fc050 1042 Pfam PF13487 HD domain 902 967 7.7E-20 T 12-10-2018 Vc3S01_A0206 8d781c1b4a569af7e2d54808f0c3b75e 236 Gene3D G3DSA:3.20.20.190 1 236 5.2E-69 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 Vc3S01_A0206 8d781c1b4a569af7e2d54808f0c3b75e 236 SUPERFAMILY SSF51695 3 234 1.05E-65 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 Vc3S01_A0206 8d781c1b4a569af7e2d54808f0c3b75e 236 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 8 231 7.1E-38 T 12-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 Vc3S01_0841 ef6a9f107b9bdd4458b890aa25609dbd 736 Gene3D G3DSA:2.60.40.2340 158 248 3.6E-11 T 12-10-2018 Vc3S01_0841 ef6a9f107b9bdd4458b890aa25609dbd 736 Gene3D G3DSA:1.50.10.10 332 609 1.1E-7 T 12-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 Vc3S01_0841 ef6a9f107b9bdd4458b890aa25609dbd 736 Gene3D G3DSA:2.60.120.260 19 156 3.6E-14 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily Vc3S01_0841 ef6a9f107b9bdd4458b890aa25609dbd 736 SUPERFAMILY SSF48208 311 675 2.31E-20 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Vc3S01_1832 426fdfe37dab1ee7bc467beaa7bae909 289 SUPERFAMILY SSF53850 90 288 4.34E-42 T 12-10-2018 Vc3S01_1832 426fdfe37dab1ee7bc467beaa7bae909 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 3.5E-20 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_1832 426fdfe37dab1ee7bc467beaa7bae909 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 8.3E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_1832 426fdfe37dab1ee7bc467beaa7bae909 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 8.3E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_1832 426fdfe37dab1ee7bc467beaa7bae909 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 8.3E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_1832 426fdfe37dab1ee7bc467beaa7bae909 289 Gene3D G3DSA:1.10.10.10 1 83 3.5E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_1832 426fdfe37dab1ee7bc467beaa7bae909 289 Gene3D G3DSA:3.40.190.290 90 289 1.5E-47 T 12-10-2018 Vc3S01_1832 426fdfe37dab1ee7bc467beaa7bae909 289 SUPERFAMILY SSF46785 2 109 3.41E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_1832 426fdfe37dab1ee7bc467beaa7bae909 289 Pfam PF03466 LysR substrate binding domain 89 287 2.0E-44 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_2557 f4500f2df70111cba066f7a252b6634b 314 Gene3D G3DSA:3.30.1330.60 153 301 1.7E-53 T 12-10-2018 IPR036737 OmpA-like domain superfamily Vc3S01_2557 f4500f2df70111cba066f7a252b6634b 314 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 12 57 2.3E-17 T 12-10-2018 IPR025713 Motility protein B, N-terminal domain Vc3S01_2557 f4500f2df70111cba066f7a252b6634b 314 SUPERFAMILY SSF103088 182 299 3.4E-30 T 12-10-2018 IPR036737 OmpA-like domain superfamily Vc3S01_2557 f4500f2df70111cba066f7a252b6634b 314 Pfam PF00691 OmpA family 195 293 1.4E-17 T 12-10-2018 IPR006665 OmpA-like domain Vc3S01_A0453 84ea699b49105c4960a85c0b6f0f1e06 670 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 436 454 2.2E-36 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Vc3S01_A0453 84ea699b49105c4960a85c0b6f0f1e06 670 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 490 509 2.2E-36 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Vc3S01_A0453 84ea699b49105c4960a85c0b6f0f1e06 670 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 519 539 2.2E-36 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Vc3S01_A0453 84ea699b49105c4960a85c0b6f0f1e06 670 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 577 592 2.2E-36 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Vc3S01_A0453 84ea699b49105c4960a85c0b6f0f1e06 670 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 462 486 2.2E-36 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Vc3S01_A0453 84ea699b49105c4960a85c0b6f0f1e06 670 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 595 617 2.2E-36 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Vc3S01_A0453 84ea699b49105c4960a85c0b6f0f1e06 670 Pfam PF00326 Prolyl oligopeptidase family 451 664 4.8E-55 T 12-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 Vc3S01_A0453 84ea699b49105c4960a85c0b6f0f1e06 670 SUPERFAMILY SSF53474 408 659 1.23E-39 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_A0453 84ea699b49105c4960a85c0b6f0f1e06 670 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 18 389 5.7E-26 T 12-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 Vc3S01_A0453 84ea699b49105c4960a85c0b6f0f1e06 670 Gene3D G3DSA:2.130.10.120 72 396 1.1E-147 T 12-10-2018 Vc3S01_A0453 84ea699b49105c4960a85c0b6f0f1e06 670 SUPERFAMILY SSF50993 19 390 6.54E-30 T 12-10-2018 Vc3S01_A0453 84ea699b49105c4960a85c0b6f0f1e06 670 Gene3D G3DSA:3.40.50.1820 21 659 1.1E-147 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_1615 e37362d1c9e3e03543a298aa5600548e 249 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_1615 e37362d1c9e3e03543a298aa5600548e 249 Pfam PF00005 ABC transporter 24 172 2.2E-39 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_1615 e37362d1c9e3e03543a298aa5600548e 249 Gene3D G3DSA:3.40.50.300 6 249 2.0E-80 T 12-10-2018 Vc3S01_1615 e37362d1c9e3e03543a298aa5600548e 249 SMART SM00382 33 220 2.6E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_1615 e37362d1c9e3e03543a298aa5600548e 249 SUPERFAMILY SSF52540 8 242 1.49E-82 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_1615 e37362d1c9e3e03543a298aa5600548e 249 PIRSF PIRSF039085 5 248 5.8E-111 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 Vc3S01_0012 d209cee2af16bbf962aa205d462d1201 1074 Gene3D G3DSA:3.40.50.300 290 504 5.9E-21 T 12-10-2018 Vc3S01_0012 d209cee2af16bbf962aa205d462d1201 1074 Pfam PF04851 Type III restriction enzyme, res subunit 291 495 8.0E-15 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Vc3S01_0012 d209cee2af16bbf962aa205d462d1201 1074 Gene3D G3DSA:3.40.50.300 526 768 1.8E-22 T 12-10-2018 Vc3S01_0012 d209cee2af16bbf962aa205d462d1201 1074 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 59 214 1.8E-11 T 12-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 Vc3S01_0012 d209cee2af16bbf962aa205d462d1201 1074 SUPERFAMILY SSF52540 248 497 1.03E-21 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0012 d209cee2af16bbf962aa205d462d1201 1074 SMART SM00487 287 526 5.6E-12 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Vc3S01_2753 cd0039a0df0cb2227312f1dd5c20c402 314 SMART SM00729 23 247 1.3E-48 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Vc3S01_2753 cd0039a0df0cb2227312f1dd5c20c402 314 Pfam PF04055 Radical SAM superfamily 43 202 9.0E-19 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Vc3S01_2753 cd0039a0df0cb2227312f1dd5c20c402 314 SUPERFAMILY SSF102114 13 268 2.09E-51 T 12-10-2018 Vc3S01_2753 cd0039a0df0cb2227312f1dd5c20c402 314 Pfam PF16199 Radical_SAM C-terminal domain 209 279 1.3E-16 T 12-10-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 Vc3S01_2753 cd0039a0df0cb2227312f1dd5c20c402 314 Gene3D G3DSA:3.80.30.20 42 279 1.8E-18 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Vc3S01_2753 cd0039a0df0cb2227312f1dd5c20c402 314 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 6 299 1.4E-135 T 12-10-2018 IPR005911 Protein YhcC-like GO:0051536 Vc3S01_A1748 0db24ba37d1d3fe608cdc0e5df1fde1a 154 Pfam PF12796 Ankyrin repeats (3 copies) 40 127 2.6E-12 T 12-10-2018 IPR020683 Ankyrin repeat-containing domain Vc3S01_A1748 0db24ba37d1d3fe608cdc0e5df1fde1a 154 SMART SM00248 33 62 240.0 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 Vc3S01_A1748 0db24ba37d1d3fe608cdc0e5df1fde1a 154 SMART SM00248 66 95 8.1E-4 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 Vc3S01_A1748 0db24ba37d1d3fe608cdc0e5df1fde1a 154 SMART SM00248 99 128 650.0 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 Vc3S01_A1748 0db24ba37d1d3fe608cdc0e5df1fde1a 154 Gene3D G3DSA:1.25.40.20 12 154 9.1E-26 T 12-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily Vc3S01_A1748 0db24ba37d1d3fe608cdc0e5df1fde1a 154 SUPERFAMILY SSF48403 32 152 1.13E-26 T 12-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily Vc3S01_0108 72cac2eee018121aab6979c25d2a5053 333 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 313 3.7E-59 T 12-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_0108 72cac2eee018121aab6979c25d2a5053 333 SUPERFAMILY SSF51735 1 173 1.57E-53 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_0108 72cac2eee018121aab6979c25d2a5053 333 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 323 1.8E-119 T 12-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_0108 72cac2eee018121aab6979c25d2a5053 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 108 121 3.9E-28 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_0108 72cac2eee018121aab6979c25d2a5053 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 3.9E-28 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_0108 72cac2eee018121aab6979c25d2a5053 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 3.9E-28 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_0108 72cac2eee018121aab6979c25d2a5053 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 3.9E-28 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_0108 72cac2eee018121aab6979c25d2a5053 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 3.9E-28 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_0108 72cac2eee018121aab6979c25d2a5053 333 PIRSF PIRSF000149 1 332 1.6E-114 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_0108 72cac2eee018121aab6979c25d2a5053 333 SMART SM00846 3 152 2.1E-71 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_0108 72cac2eee018121aab6979c25d2a5053 333 Gene3D G3DSA:3.30.360.10 151 315 1.9E-126 T 12-10-2018 Vc3S01_0108 72cac2eee018121aab6979c25d2a5053 333 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 101 2.9E-31 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_0108 72cac2eee018121aab6979c25d2a5053 333 Gene3D G3DSA:3.40.50.720 4 327 1.9E-126 T 12-10-2018 Vc3S01_0108 72cac2eee018121aab6979c25d2a5053 333 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 12-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_0108 72cac2eee018121aab6979c25d2a5053 333 SUPERFAMILY SSF55347 152 314 7.44E-63 T 12-10-2018 Vc3S01_2835 0e30e99689bcbba23eea0379fb9a75d2 587 Gene3D G3DSA:3.40.630.30 312 456 1.9E-6 T 12-10-2018 Vc3S01_2835 0e30e99689bcbba23eea0379fb9a75d2 587 SUPERFAMILY SSF55729 313 495 3.44E-21 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_2835 0e30e99689bcbba23eea0379fb9a75d2 587 Pfam PF13444 Acetyltransferase (GNAT) domain 330 431 6.9E-21 T 12-10-2018 Vc3S01_2835 0e30e99689bcbba23eea0379fb9a75d2 587 SUPERFAMILY SSF69593 47 161 1.44E-6 T 12-10-2018 Vc3S01_2835 0e30e99689bcbba23eea0379fb9a75d2 587 SMART SM00563 75 199 4.1E-5 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Vc3S01_2996 1d24563085a82d5cdf1c20819b0c78ec 422 SUPERFAMILY SSF53756 54 411 7.63E-18 T 12-10-2018 Vc3S01_2996 1d24563085a82d5cdf1c20819b0c78ec 422 Gene3D G3DSA:3.40.50.2000 217 407 5.0E-59 T 12-10-2018 Vc3S01_2996 1d24563085a82d5cdf1c20819b0c78ec 422 Pfam PF00534 Glycosyl transferases group 1 239 403 4.0E-9 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 Vc3S01_2996 1d24563085a82d5cdf1c20819b0c78ec 422 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 35 212 1.0E-62 T 12-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 Vc3S01_2996 1d24563085a82d5cdf1c20819b0c78ec 422 Gene3D G3DSA:3.40.50.11720 34 210 6.7E-49 T 12-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 Vc3S01_A1896 7c50db07b4b05986c5aa3853ee087334 1328 Pfam PF11852 Domain of unknown function (DUF3372) 917 1079 5.0E-61 T 12-10-2018 IPR024561 Alpha-1,6-glucosidases, pullulanase-type, C-terminal Vc3S01_A1896 7c50db07b4b05986c5aa3853ee087334 1328 Gene3D G3DSA:3.20.20.80 410 1009 2.1E-214 T 12-10-2018 Vc3S01_A1896 7c50db07b4b05986c5aa3853ee087334 1328 Gene3D G3DSA:2.60.40.10 303 409 1.5E-29 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_A1896 7c50db07b4b05986c5aa3853ee087334 1328 SUPERFAMILY SSF49452 15 171 1.86E-29 T 12-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 Vc3S01_A1896 7c50db07b4b05986c5aa3853ee087334 1328 Gene3D G3DSA:2.60.40.10 1092 1166 8.1E-7 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_A1896 7c50db07b4b05986c5aa3853ee087334 1328 TIGRFAM TIGR02103 pullul_strch: alpha-1,6-glucosidases, pullulanase-type 180 1080 0.0 T 12-10-2018 IPR011839 Alpha-1,6-glucosidases, pullulanase-type GO:0005975|GO:0051060 Vc3S01_A1896 7c50db07b4b05986c5aa3853ee087334 1328 Pfam PF03714 Bacterial pullanase-associated domain 51 171 1.4E-17 T 12-10-2018 IPR005323 Pullulanase, carbohydrate-binding module 41 GO:0005975|GO:0030246 Vc3S01_A1896 7c50db07b4b05986c5aa3853ee087334 1328 Gene3D G3DSA:2.60.40.1110 34 170 1.0E-29 T 12-10-2018 Vc3S01_A1896 7c50db07b4b05986c5aa3853ee087334 1328 SUPERFAMILY SSF51445 407 975 4.84E-125 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily Vc3S01_A1896 7c50db07b4b05986c5aa3853ee087334 1328 SUPERFAMILY SSF81296 171 296 4.2E-31 T 12-10-2018 IPR014756 Immunoglobulin E-set Vc3S01_A1896 7c50db07b4b05986c5aa3853ee087334 1328 Gene3D G3DSA:2.60.40.1180 1010 1091 2.1E-26 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta Vc3S01_A1896 7c50db07b4b05986c5aa3853ee087334 1328 Gene3D G3DSA:2.60.40.1130 180 296 3.0E-31 T 12-10-2018 Vc3S01_A1896 7c50db07b4b05986c5aa3853ee087334 1328 SMART SM00642 552 915 4.1E-4 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Vc3S01_A1896 7c50db07b4b05986c5aa3853ee087334 1328 SUPERFAMILY SSF51011 978 1092 1.22E-38 T 12-10-2018 Vc3S01_A1896 7c50db07b4b05986c5aa3853ee087334 1328 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 311 395 2.0E-14 T 12-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 Vc3S01_A1896 7c50db07b4b05986c5aa3853ee087334 1328 SUPERFAMILY SSF81296 1103 1153 4.76E-6 T 12-10-2018 IPR014756 Immunoglobulin E-set Vc3S01_A1896 7c50db07b4b05986c5aa3853ee087334 1328 SUPERFAMILY SSF81296 309 413 3.0E-21 T 12-10-2018 IPR014756 Immunoglobulin E-set Vc3S01_2226 faf2c809a5f8359f48cdceda5279a78e 876 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 603 628 4.8E-5 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 Vc3S01_2226 faf2c809a5f8359f48cdceda5279a78e 876 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 713 750 4.5E-9 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 Vc3S01_2226 faf2c809a5f8359f48cdceda5279a78e 876 Pfam PF01131 DNA topoisomerase 164 571 2.6E-126 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Vc3S01_2226 faf2c809a5f8359f48cdceda5279a78e 876 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 640 2.1E-247 T 12-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 Vc3S01_2226 faf2c809a5f8359f48cdceda5279a78e 876 SUPERFAMILY SSF57783 749 812 2.72E-19 T 12-10-2018 Vc3S01_2226 faf2c809a5f8359f48cdceda5279a78e 876 Pfam PF08272 Topoisomerase I zinc-ribbon-like 829 869 3.0E-17 T 12-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 Vc3S01_2226 faf2c809a5f8359f48cdceda5279a78e 876 Pfam PF08272 Topoisomerase I zinc-ribbon-like 762 798 2.9E-11 T 12-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 Vc3S01_2226 faf2c809a5f8359f48cdceda5279a78e 876 Gene3D G3DSA:2.70.20.10 220 479 1.1E-160 T 12-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 Vc3S01_2226 faf2c809a5f8359f48cdceda5279a78e 876 Gene3D G3DSA:1.10.460.10 172 577 1.1E-160 T 12-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 Vc3S01_2226 faf2c809a5f8359f48cdceda5279a78e 876 Gene3D G3DSA:1.10.290.10 287 411 1.1E-160 T 12-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 Vc3S01_2226 faf2c809a5f8359f48cdceda5279a78e 876 SMART SM00436 140 228 2.0E-46 T 12-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 Vc3S01_2226 faf2c809a5f8359f48cdceda5279a78e 876 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 737 54.195 T 12-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 Vc3S01_2226 faf2c809a5f8359f48cdceda5279a78e 876 SMART SM00493 3 139 8.2E-35 T 12-10-2018 IPR006171 TOPRIM domain Vc3S01_2226 faf2c809a5f8359f48cdceda5279a78e 876 Gene3D G3DSA:3.40.50.140 1 170 2.9E-66 T 12-10-2018 Vc3S01_2226 faf2c809a5f8359f48cdceda5279a78e 876 Pfam PF01751 Toprim domain 5 149 1.2E-32 T 12-10-2018 IPR006171 TOPRIM domain Vc3S01_2226 faf2c809a5f8359f48cdceda5279a78e 876 SUPERFAMILY SSF57783 814 870 3.57E-20 T 12-10-2018 Vc3S01_2226 faf2c809a5f8359f48cdceda5279a78e 876 Gene3D G3DSA:2.20.25.10 813 870 7.0E-26 T 12-10-2018 Vc3S01_2226 faf2c809a5f8359f48cdceda5279a78e 876 SUPERFAMILY SSF56712 3 615 1.28E-197 T 12-10-2018 IPR023405 DNA topoisomerase, type IA, core domain Vc3S01_2226 faf2c809a5f8359f48cdceda5279a78e 876 Gene3D G3DSA:3.30.65.10 750 812 4.2E-32 T 12-10-2018 Vc3S01_2226 faf2c809a5f8359f48cdceda5279a78e 876 Gene3D G3DSA:3.30.65.10 703 749 2.8E-6 T 12-10-2018 Vc3S01_2226 faf2c809a5f8359f48cdceda5279a78e 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 198 216 3.6E-36 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Vc3S01_2226 faf2c809a5f8359f48cdceda5279a78e 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 113 126 3.6E-36 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Vc3S01_2226 faf2c809a5f8359f48cdceda5279a78e 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 321 330 3.6E-36 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Vc3S01_2226 faf2c809a5f8359f48cdceda5279a78e 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 397 413 3.6E-36 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Vc3S01_2226 faf2c809a5f8359f48cdceda5279a78e 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 496 510 3.6E-36 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Vc3S01_2226 faf2c809a5f8359f48cdceda5279a78e 876 SMART SM00437 279 533 8.4E-119 T 12-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 Vc3S01_2226 faf2c809a5f8359f48cdceda5279a78e 876 SUPERFAMILY SSF57783 705 747 2.21E-5 T 12-10-2018 Vc3S01_2226 faf2c809a5f8359f48cdceda5279a78e 876 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 316 330 - T 12-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 Vc3S01_2137 6e2f48177bc0b6073050ddb87e0a92af 137 Pfam PF09621 Type III secretion system regulator (LcrR) 5 137 6.1E-56 T 12-10-2018 IPR022797 Type III secretion system regulator LcrR/Chaperone CesD2 Vc3S01_2137 6e2f48177bc0b6073050ddb87e0a92af 137 TIGRFAM TIGR02572 LcrR: type III secretion system regulator LcrR 4 137 1.1E-57 T 12-10-2018 IPR013405 Type III secretion system regulator, LcrR Vc3S01_1125 6bbc80a215c1cc3ee60bce881dba0778 226 Pfam PF02224 Cytidylate kinase 8 221 3.4E-77 T 12-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 Vc3S01_1125 6bbc80a215c1cc3ee60bce881dba0778 226 Gene3D G3DSA:3.40.50.300 1 226 2.8E-81 T 12-10-2018 Vc3S01_1125 6bbc80a215c1cc3ee60bce881dba0778 226 Hamap MF_00238 Cytidylate kinase [cmk]. 6 224 33.789 T 12-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 Vc3S01_1125 6bbc80a215c1cc3ee60bce881dba0778 226 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 219 2.6E-84 T 12-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 Vc3S01_1125 6bbc80a215c1cc3ee60bce881dba0778 226 SUPERFAMILY SSF52540 6 223 1.18E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2167 11f7669c5e303ca4aa9281332c946f65 623 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 472 505 - T 12-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 Vc3S01_2167 11f7669c5e303ca4aa9281332c946f65 623 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 379 398 6.4E-39 T 12-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 Vc3S01_2167 11f7669c5e303ca4aa9281332c946f65 623 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 413 428 6.4E-39 T 12-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 Vc3S01_2167 11f7669c5e303ca4aa9281332c946f65 623 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 200 217 6.4E-39 T 12-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 Vc3S01_2167 11f7669c5e303ca4aa9281332c946f65 623 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 505 524 6.4E-39 T 12-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 Vc3S01_2167 11f7669c5e303ca4aa9281332c946f65 623 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 295 315 6.4E-39 T 12-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 Vc3S01_2167 11f7669c5e303ca4aa9281332c946f65 623 Pfam PF00263 Bacterial type II and III secretion system protein 366 526 1.4E-36 T 12-10-2018 IPR004846 Type II/III secretion system GO:0009306 Vc3S01_2167 11f7669c5e303ca4aa9281332c946f65 623 TIGRFAM TIGR02516 type_III_yscC: type III secretion outer membrane pore, YscC/HrcC family 40 527 1.3E-151 T 12-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 Vc3S01_2167 11f7669c5e303ca4aa9281332c946f65 623 Gene3D G3DSA:3.30.1370.120 187 292 2.1E-9 T 12-10-2018 IPR038591 NolW-like superfamily Vc3S01_2167 11f7669c5e303ca4aa9281332c946f65 623 Gene3D G3DSA:3.55.50.30 28 111 1.5E-29 T 12-10-2018 Vc3S01_2167 11f7669c5e303ca4aa9281332c946f65 623 Pfam PF03958 Bacterial type II/III secretion system short domain 188 292 1.8E-15 T 12-10-2018 IPR005644 NolW-like Vc3S01_2167 11f7669c5e303ca4aa9281332c946f65 623 Gene3D G3DSA:3.30.1370.120 112 180 5.8E-14 T 12-10-2018 IPR038591 NolW-like superfamily Vc3S01_0736 43d98f7979911e89ba18d2ea85f4c3b3 296 SUPERFAMILY SSF51735 2 165 5.92E-51 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_0736 43d98f7979911e89ba18d2ea85f4c3b3 296 Gene3D G3DSA:1.10.1040.10 167 296 1.3E-40 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Vc3S01_0736 43d98f7979911e89ba18d2ea85f4c3b3 296 SUPERFAMILY SSF48179 167 290 7.82E-35 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Vc3S01_0736 43d98f7979911e89ba18d2ea85f4c3b3 296 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 167 290 1.6E-35 T 12-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain Vc3S01_0736 43d98f7979911e89ba18d2ea85f4c3b3 296 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 292 1.3E-81 T 12-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 Vc3S01_0736 43d98f7979911e89ba18d2ea85f4c3b3 296 Gene3D G3DSA:3.40.50.720 1 166 6.3E-50 T 12-10-2018 Vc3S01_0736 43d98f7979911e89ba18d2ea85f4c3b3 296 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 141 3.5E-32 T 12-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain Vc3S01_1274 ad65a63cc22cc82847782cf081ffeea8 453 SUPERFAMILY SSF143548 16 157 3.14E-44 T 12-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 Vc3S01_1274 ad65a63cc22cc82847782cf081ffeea8 453 Pfam PF03315 Serine dehydratase beta chain 3 155 3.6E-54 T 12-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 Vc3S01_1274 ad65a63cc22cc82847782cf081ffeea8 453 Gene3D G3DSA:3.30.1330.90 10 159 1.5E-49 T 12-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 Vc3S01_1274 ad65a63cc22cc82847782cf081ffeea8 453 Pfam PF03313 Serine dehydratase alpha chain 184 448 1.3E-97 T 12-10-2018 IPR005130 Serine dehydratase-like, alpha subunit Vc3S01_1274 ad65a63cc22cc82847782cf081ffeea8 453 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 8.6E-227 T 12-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 Vc3S01_2188 1df1ab25f92ad4a1dc21eaa4758a3282 342 SUPERFAMILY SSF74653 250 341 2.75E-15 T 12-10-2018 Vc3S01_2188 1df1ab25f92ad4a1dc21eaa4758a3282 342 Pfam PF06519 TolA C-terminal 240 338 1.8E-34 T 12-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 Vc3S01_2188 1df1ab25f92ad4a1dc21eaa4758a3282 342 Gene3D G3DSA:3.30.1150.10 240 339 3.0E-22 T 12-10-2018 Vc3S01_2188 1df1ab25f92ad4a1dc21eaa4758a3282 342 TIGRFAM TIGR02794 tolA_full: protein TolA 13 339 1.7E-85 T 12-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 Vc3S01_A0718 89bace4f8dbde3264c7d2f6bc900534b 859 Pfam PF00072 Response regulator receiver domain 737 846 6.9E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A0718 89bace4f8dbde3264c7d2f6bc900534b 859 SMART SM00387 594 711 2.2E-37 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_A0718 89bace4f8dbde3264c7d2f6bc900534b 859 Pfam PF00512 His Kinase A (phospho-acceptor) domain 483 547 5.8E-19 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_A0718 89bace4f8dbde3264c7d2f6bc900534b 859 Gene3D G3DSA:2.20.20.100 208 271 3.6E-40 T 12-10-2018 Vc3S01_A0718 89bace4f8dbde3264c7d2f6bc900534b 859 Gene3D G3DSA:3.30.450.20 344 471 5.7E-10 T 12-10-2018 Vc3S01_A0718 89bace4f8dbde3264c7d2f6bc900534b 859 SMART SM00448 735 847 1.2E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A0718 89bace4f8dbde3264c7d2f6bc900534b 859 PRINTS PR00344 Bacterial sensor protein C-terminal signature 654 664 2.7E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_A0718 89bace4f8dbde3264c7d2f6bc900534b 859 PRINTS PR00344 Bacterial sensor protein C-terminal signature 671 689 2.7E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_A0718 89bace4f8dbde3264c7d2f6bc900534b 859 PRINTS PR00344 Bacterial sensor protein C-terminal signature 695 708 2.7E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_A0718 89bace4f8dbde3264c7d2f6bc900534b 859 PRINTS PR00344 Bacterial sensor protein C-terminal signature 636 650 2.7E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_A0718 89bace4f8dbde3264c7d2f6bc900534b 859 Pfam PF09308 LuxQ, periplasmic 41 278 4.3E-97 T 12-10-2018 IPR015387 LuxQ, periplasmic GO:0004673|GO:0016791 Vc3S01_A0718 89bace4f8dbde3264c7d2f6bc900534b 859 SUPERFAMILY SSF47384 470 548 3.34E-19 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Vc3S01_A0718 89bace4f8dbde3264c7d2f6bc900534b 859 ProDom PD142495 MEMBRANE SENSOR TRANSFERASE LUXQ 2.7.3.- TRANSMEMBRANE INNER PHOSPHORYLATION SENSORY AUTOINDUCER 9 361 0.0 T 12-10-2018 IPR015387 LuxQ, periplasmic GO:0004673|GO:0016791 Vc3S01_A0718 89bace4f8dbde3264c7d2f6bc900534b 859 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 594 709 8.3E-29 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_A0718 89bace4f8dbde3264c7d2f6bc900534b 859 SUPERFAMILY SSF55874 536 709 1.7E-44 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_A0718 89bace4f8dbde3264c7d2f6bc900534b 859 Gene3D G3DSA:3.30.450.220 51 207 5.3E-66 T 12-10-2018 Vc3S01_A0718 89bace4f8dbde3264c7d2f6bc900534b 859 SMART SM00388 482 547 3.0E-21 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_A0718 89bace4f8dbde3264c7d2f6bc900534b 859 Gene3D G3DSA:1.10.287.130 472 547 1.1E-21 T 12-10-2018 Vc3S01_A0718 89bace4f8dbde3264c7d2f6bc900534b 859 Gene3D G3DSA:3.30.565.10 548 715 3.6E-46 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_A0718 89bace4f8dbde3264c7d2f6bc900534b 859 Gene3D G3DSA:3.40.50.2300 722 855 1.3E-30 T 12-10-2018 Vc3S01_A0718 89bace4f8dbde3264c7d2f6bc900534b 859 SUPERFAMILY SSF103190 52 270 5.57E-72 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Vc3S01_A0718 89bace4f8dbde3264c7d2f6bc900534b 859 SUPERFAMILY SSF52172 734 854 1.28E-28 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_A0286 98147eb7aaab1af5adea49481ab3a93e 791 SUPERFAMILY SSF49785 679 790 8.08E-22 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily Vc3S01_A0286 98147eb7aaab1af5adea49481ab3a93e 791 SUPERFAMILY SSF52743 123 549 1.72E-99 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Vc3S01_A0286 98147eb7aaab1af5adea49481ab3a93e 791 Pfam PF00082 Subtilase family 146 374 4.5E-25 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 Vc3S01_A0286 98147eb7aaab1af5adea49481ab3a93e 791 Gene3D G3DSA:2.60.120.260 677 791 1.2E-14 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily Vc3S01_A0286 98147eb7aaab1af5adea49481ab3a93e 791 SUPERFAMILY SSF54897 41 119 9.35E-5 T 12-10-2018 Vc3S01_A0286 98147eb7aaab1af5adea49481ab3a93e 791 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 488 498 - T 12-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site Vc3S01_A0286 98147eb7aaab1af5adea49481ab3a93e 791 Pfam PF02225 PA domain 375 465 8.5E-7 T 12-10-2018 IPR003137 PA domain Vc3S01_A0286 98147eb7aaab1af5adea49481ab3a93e 791 Gene3D G3DSA:2.60.120.380 564 665 3.1E-33 T 12-10-2018 Vc3S01_A0286 98147eb7aaab1af5adea49481ab3a93e 791 Gene3D G3DSA:3.40.50.200 144 545 2.4E-156 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Vc3S01_A0286 98147eb7aaab1af5adea49481ab3a93e 791 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 584 652 7.5E-11 T 12-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial Vc3S01_A0286 98147eb7aaab1af5adea49481ab3a93e 791 Pfam PF01483 Proprotein convertase P-domain 711 790 2.2E-20 T 12-10-2018 IPR002884 P domain GO:0004252|GO:0006508 Vc3S01_A0286 98147eb7aaab1af5adea49481ab3a93e 791 PRINTS PR00723 Subtilisin serine protease family (S8) signature 142 161 2.4E-15 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related Vc3S01_A0286 98147eb7aaab1af5adea49481ab3a93e 791 PRINTS PR00723 Subtilisin serine protease family (S8) signature 182 195 2.4E-15 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related Vc3S01_A0286 98147eb7aaab1af5adea49481ab3a93e 791 PRINTS PR00723 Subtilisin serine protease family (S8) signature 487 503 2.4E-15 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related Vc3S01_A0286 98147eb7aaab1af5adea49481ab3a93e 791 Pfam PF00082 Subtilase family 478 538 1.5E-13 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 Vc3S01_A0286 98147eb7aaab1af5adea49481ab3a93e 791 Gene3D G3DSA:3.50.30.30 335 480 2.4E-156 T 12-10-2018 Vc3S01_A0286 98147eb7aaab1af5adea49481ab3a93e 791 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 186 196 - T 12-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site Vc3S01_A0286 98147eb7aaab1af5adea49481ab3a93e 791 Gene3D G3DSA:3.30.70.80 37 125 7.4E-6 T 12-10-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 Vc3S01_2620 6fd21afacf8dd86f7d818987054ec7a1 517 PRINTS PR00097 Anthranilate synthase component II signature 54 63 3.5E-6 T 12-10-2018 Vc3S01_2620 6fd21afacf8dd86f7d818987054ec7a1 517 PRINTS PR00097 Anthranilate synthase component II signature 81 92 3.5E-6 T 12-10-2018 Vc3S01_2620 6fd21afacf8dd86f7d818987054ec7a1 517 PRINTS PR00097 Anthranilate synthase component II signature 169 182 3.5E-6 T 12-10-2018 Vc3S01_2620 6fd21afacf8dd86f7d818987054ec7a1 517 Pfam PF00958 GMP synthase C terminal domain 425 516 1.5E-43 T 12-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 Vc3S01_2620 6fd21afacf8dd86f7d818987054ec7a1 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 2.8E-7 T 12-10-2018 Vc3S01_2620 6fd21afacf8dd86f7d818987054ec7a1 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 2.8E-7 T 12-10-2018 Vc3S01_2620 6fd21afacf8dd86f7d818987054ec7a1 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 2.8E-7 T 12-10-2018 Vc3S01_2620 6fd21afacf8dd86f7d818987054ec7a1 517 Gene3D G3DSA:3.40.50.620 202 397 4.6E-75 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Vc3S01_2620 6fd21afacf8dd86f7d818987054ec7a1 517 Pfam PF00117 Glutamine amidotransferase class-I 12 191 7.1E-42 T 12-10-2018 IPR017926 Glutamine amidotransferase Vc3S01_2620 6fd21afacf8dd86f7d818987054ec7a1 517 SUPERFAMILY SSF52317 9 200 8.1E-57 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Vc3S01_2620 6fd21afacf8dd86f7d818987054ec7a1 517 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 197 1.2E-83 T 12-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 Vc3S01_2620 6fd21afacf8dd86f7d818987054ec7a1 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 4.0E-6 T 12-10-2018 Vc3S01_2620 6fd21afacf8dd86f7d818987054ec7a1 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 4.0E-6 T 12-10-2018 Vc3S01_2620 6fd21afacf8dd86f7d818987054ec7a1 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 4.0E-6 T 12-10-2018 Vc3S01_2620 6fd21afacf8dd86f7d818987054ec7a1 517 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 205 517 5.6E-156 T 12-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 Vc3S01_2620 6fd21afacf8dd86f7d818987054ec7a1 517 SUPERFAMILY SSF54810 397 517 5.75E-51 T 12-10-2018 Vc3S01_2620 6fd21afacf8dd86f7d818987054ec7a1 517 Gene3D G3DSA:3.30.300.10 398 517 1.0E-50 T 12-10-2018 Vc3S01_2620 6fd21afacf8dd86f7d818987054ec7a1 517 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 517 56.431 T 12-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 Vc3S01_2620 6fd21afacf8dd86f7d818987054ec7a1 517 SUPERFAMILY SSF52402 189 412 6.4E-58 T 12-10-2018 Vc3S01_2620 6fd21afacf8dd86f7d818987054ec7a1 517 Gene3D G3DSA:3.40.50.880 6 201 5.4E-54 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Vc3S01_2620 6fd21afacf8dd86f7d818987054ec7a1 517 Pfam PF02540 NAD synthase 212 285 1.1E-7 T 12-10-2018 IPR022310 NAD/GMP synthase Vc3S01_1914 5092cc9e43a1f7a3d87c26b7b0008373 367 Gene3D G3DSA:3.30.200.20 12 129 1.7E-24 T 12-10-2018 Vc3S01_1914 5092cc9e43a1f7a3d87c26b7b0008373 367 SUPERFAMILY SSF56104 14 343 2.52E-67 T 12-10-2018 Vc3S01_1914 5092cc9e43a1f7a3d87c26b7b0008373 367 ProSitePatterns PS01057 SAICAR synthetase signature 1. 124 138 - T 12-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Vc3S01_1914 5092cc9e43a1f7a3d87c26b7b0008373 367 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 19 342 21.415 T 12-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Vc3S01_1914 5092cc9e43a1f7a3d87c26b7b0008373 367 TIGRFAM TIGR02735 purC_vibrio: phosphoribosylaminoimidazole-succinocarboxamide synthase 2 366 1.4E-214 T 12-10-2018 IPR014106 Phosphoribosylaminoimidazole-succinocarboxamide synthase, Vibrio-type GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 Vc3S01_1914 5092cc9e43a1f7a3d87c26b7b0008373 367 Gene3D G3DSA:3.30.470.20 130 292 1.2E-14 T 12-10-2018 Vc3S01_1914 5092cc9e43a1f7a3d87c26b7b0008373 367 Pfam PF01259 SAICAR synthetase 22 293 8.0E-48 T 12-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Vc3S01_0783 5843e6043757c2eed762ca4a3bfb04b3 185 Pfam PF01765 Ribosome recycling factor 20 183 8.4E-64 T 12-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 Vc3S01_0783 5843e6043757c2eed762ca4a3bfb04b3 185 SUPERFAMILY SSF55194 2 184 1.57E-72 T 12-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 Vc3S01_0783 5843e6043757c2eed762ca4a3bfb04b3 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 8.5E-77 T 12-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 Vc3S01_0783 5843e6043757c2eed762ca4a3bfb04b3 185 Gene3D G3DSA:1.10.132.20 1 34 5.0E-10 T 12-10-2018 Vc3S01_0783 5843e6043757c2eed762ca4a3bfb04b3 185 Gene3D G3DSA:1.10.132.20 101 185 1.6E-29 T 12-10-2018 Vc3S01_0783 5843e6043757c2eed762ca4a3bfb04b3 185 Gene3D G3DSA:3.30.1360.40 35 100 5.0E-31 T 12-10-2018 Vc3S01_0783 5843e6043757c2eed762ca4a3bfb04b3 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.862 T 12-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 Vc3S01_1827 b8a1f09a0e8dfcc0fadf2a81f1481362 163 SUPERFAMILY SSF54523 10 56 1.57E-10 T 12-10-2018 Vc3S01_1827 b8a1f09a0e8dfcc0fadf2a81f1481362 163 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 29 3.0E-8 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Vc3S01_1827 b8a1f09a0e8dfcc0fadf2a81f1481362 163 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 8 28 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Vc3S01_1827 b8a1f09a0e8dfcc0fadf2a81f1481362 163 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 29 1.7E-7 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Vc3S01_1827 b8a1f09a0e8dfcc0fadf2a81f1481362 163 Gene3D G3DSA:3.30.700.10 10 143 2.8E-9 T 12-10-2018 Vc3S01_0612 d790deccf71f3242345af4cd7bd76a3b 371 SUPERFAMILY SSF111369 69 283 8.37E-32 T 12-10-2018 Vc3S01_0612 d790deccf71f3242345af4cd7bd76a3b 371 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 67 275 8.9E-22 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Vc3S01_0612 d790deccf71f3242345af4cd7bd76a3b 371 Gene3D G3DSA:2.40.50.100 80 208 1.6E-49 T 12-10-2018 Vc3S01_0612 d790deccf71f3242345af4cd7bd76a3b 371 Gene3D G3DSA:2.40.420.20 289 355 1.6E-49 T 12-10-2018 Vc3S01_0612 d790deccf71f3242345af4cd7bd76a3b 371 Gene3D G3DSA:2.40.30.170 68 288 1.6E-49 T 12-10-2018 Vc3S01_0612 d790deccf71f3242345af4cd7bd76a3b 371 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 62 356 6.6E-48 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Vc3S01_0612 d790deccf71f3242345af4cd7bd76a3b 371 Gene3D G3DSA:1.10.287.470 115 174 1.6E-49 T 12-10-2018 Vc3S01_1618 7d300b595b12ced9cc63916a20ef250d 342 Gene3D G3DSA:3.40.190.10 28 257 3.2E-50 T 12-10-2018 Vc3S01_1618 7d300b595b12ced9cc63916a20ef250d 342 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 257 6.8E-29 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Vc3S01_1618 7d300b595b12ced9cc63916a20ef250d 342 SUPERFAMILY SSF53850 29 258 1.79E-48 T 12-10-2018 Vc3S01_1618 7d300b595b12ced9cc63916a20ef250d 342 SMART SM00062 38 267 8.2E-52 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Vc3S01_1618 7d300b595b12ced9cc63916a20ef250d 342 Gene3D G3DSA:3.40.190.10 130 225 3.2E-50 T 12-10-2018 Vc3S01_1601 5aa8164b31e8e6b6c59ba286cc24b9f6 655 SMART SM00267 466 638 9.6E-31 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_1601 5aa8164b31e8e6b6c59ba286cc24b9f6 655 SUPERFAMILY SSF48452 213 400 1.75E-20 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_1601 5aa8164b31e8e6b6c59ba286cc24b9f6 655 Gene3D G3DSA:1.25.40.10 242 408 9.8E-22 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_1601 5aa8164b31e8e6b6c59ba286cc24b9f6 655 Pfam PF13424 Tetratricopeptide repeat 212 280 3.8E-8 T 12-10-2018 Vc3S01_1601 5aa8164b31e8e6b6c59ba286cc24b9f6 655 SUPERFAMILY SSF48452 87 233 1.72E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_1601 5aa8164b31e8e6b6c59ba286cc24b9f6 655 Gene3D G3DSA:1.25.40.10 93 241 3.0E-14 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_1601 5aa8164b31e8e6b6c59ba286cc24b9f6 655 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 477 635 1.9E-34 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_1601 5aa8164b31e8e6b6c59ba286cc24b9f6 655 Pfam PF13181 Tetratricopeptide repeat 293 319 0.0082 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_1601 5aa8164b31e8e6b6c59ba286cc24b9f6 655 SUPERFAMILY SSF55073 482 636 2.43E-33 T 12-10-2018 IPR029787 Nucleotide cyclase Vc3S01_1601 5aa8164b31e8e6b6c59ba286cc24b9f6 655 Pfam PF00990 Diguanylate cyclase, GGDEF domain 478 633 2.6E-31 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_1601 5aa8164b31e8e6b6c59ba286cc24b9f6 655 Gene3D G3DSA:3.30.70.270 479 641 2.1E-37 T 12-10-2018 Vc3S01_1601 5aa8164b31e8e6b6c59ba286cc24b9f6 655 SMART SM00028 370 403 290.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_1601 5aa8164b31e8e6b6c59ba286cc24b9f6 655 SMART SM00028 92 125 100.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_1601 5aa8164b31e8e6b6c59ba286cc24b9f6 655 SMART SM00028 330 363 16.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_1601 5aa8164b31e8e6b6c59ba286cc24b9f6 655 SMART SM00028 210 243 18.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_1601 5aa8164b31e8e6b6c59ba286cc24b9f6 655 SMART SM00028 290 323 0.049 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_1601 5aa8164b31e8e6b6c59ba286cc24b9f6 655 SMART SM00028 250 283 0.9 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_A0372 85fbd32e1f6b46bdcf88ee370874e564 243 Pfam PF02108 Flagellar assembly protein FliH 98 220 7.8E-28 T 12-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE Vc3S01_A0372 85fbd32e1f6b46bdcf88ee370874e564 243 SUPERFAMILY SSF160527 124 233 2.22E-5 T 12-10-2018 Vc3S01_0668 b65326f194df4d63753a7f7ff1654b3d 241 Gene3D G3DSA:1.10.10.60 187 241 5.2E-21 T 12-10-2018 Vc3S01_0668 b65326f194df4d63753a7f7ff1654b3d 241 SUPERFAMILY SSF46689 191 240 3.36E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_0668 b65326f194df4d63753a7f7ff1654b3d 241 SMART SM00342 154 238 2.4E-27 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_0668 b65326f194df4d63753a7f7ff1654b3d 241 Gene3D G3DSA:1.10.10.60 137 186 6.4E-12 T 12-10-2018 Vc3S01_0668 b65326f194df4d63753a7f7ff1654b3d 241 SUPERFAMILY SSF46689 142 188 1.16E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_0668 b65326f194df4d63753a7f7ff1654b3d 241 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 191 234 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Vc3S01_0668 b65326f194df4d63753a7f7ff1654b3d 241 Pfam PF12833 Helix-turn-helix domain 161 240 5.1E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_0668 b65326f194df4d63753a7f7ff1654b3d 241 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 207 222 4.6E-7 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Vc3S01_0668 b65326f194df4d63753a7f7ff1654b3d 241 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 222 238 4.6E-7 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Vc3S01_1766 f8934b69026c2c437e0438451aa6d8a8 139 Gene3D G3DSA:2.60.120.10 31 136 4.3E-19 T 12-10-2018 IPR014710 RmlC-like jelly roll fold Vc3S01_1766 f8934b69026c2c437e0438451aa6d8a8 139 Pfam PF07883 Cupin domain 61 128 1.0E-14 T 12-10-2018 IPR013096 Cupin 2, conserved barrel Vc3S01_1766 f8934b69026c2c437e0438451aa6d8a8 139 SUPERFAMILY SSF51182 37 130 8.0E-21 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily Vc3S01_p30058 cf301d166d45f5e299f16b778400707f 475 Pfam PF01420 Type I restriction modification DNA specificity domain 251 399 1.5E-9 T 12-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 Vc3S01_p30058 cf301d166d45f5e299f16b778400707f 475 Pfam PF01420 Type I restriction modification DNA specificity domain 6 126 4.7E-6 T 12-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 Vc3S01_p30058 cf301d166d45f5e299f16b778400707f 475 Gene3D G3DSA:3.90.220.20 222 427 1.4E-40 T 12-10-2018 Vc3S01_p30058 cf301d166d45f5e299f16b778400707f 475 Gene3D G3DSA:3.90.220.20 1 151 3.3E-23 T 12-10-2018 Vc3S01_p30058 cf301d166d45f5e299f16b778400707f 475 SUPERFAMILY SSF116734 4 160 1.57E-22 T 12-10-2018 Vc3S01_p30058 cf301d166d45f5e299f16b778400707f 475 SUPERFAMILY SSF116734 226 436 2.62E-40 T 12-10-2018 Vc3S01_0875 a4722f9f76f4642a1b8e899e0f659427 371 PIRSF PIRSF000876 1 369 1.2E-126 T 12-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 Vc3S01_0875 a4722f9f76f4642a1b8e899e0f659427 371 Gene3D G3DSA:3.40.50.2300 2 130 1.5E-31 T 12-10-2018 Vc3S01_0875 a4722f9f76f4642a1b8e899e0f659427 371 SUPERFAMILY SSF52738 180 365 2.62E-62 T 12-10-2018 IPR035909 Methylesterase CheB, C-terminal Vc3S01_0875 a4722f9f76f4642a1b8e899e0f659427 371 Gene3D G3DSA:3.40.50.180 178 367 6.9E-64 T 12-10-2018 IPR035909 Methylesterase CheB, C-terminal Vc3S01_0875 a4722f9f76f4642a1b8e899e0f659427 371 SUPERFAMILY SSF52172 2 109 7.12E-27 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_0875 a4722f9f76f4642a1b8e899e0f659427 371 Pfam PF01339 CheB methylesterase 186 363 7.6E-58 T 12-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 Vc3S01_0875 a4722f9f76f4642a1b8e899e0f659427 371 SMART SM00448 3 126 9.2E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_0875 a4722f9f76f4642a1b8e899e0f659427 371 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 3 369 38.681 T 12-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 Vc3S01_0875 a4722f9f76f4642a1b8e899e0f659427 371 Pfam PF00072 Response regulator receiver domain 5 109 1.6E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_0549 0d80a2470122073c74307cde6655ce21 172 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 9 148 4.0E-80 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 Vc3S01_0549 0d80a2470122073c74307cde6655ce21 172 SUPERFAMILY SSF63411 4 162 1.1E-66 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Vc3S01_0549 0d80a2470122073c74307cde6655ce21 172 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 153 8.9E-62 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 Vc3S01_0549 0d80a2470122073c74307cde6655ce21 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 5.5E-52 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 Vc3S01_0549 0d80a2470122073c74307cde6655ce21 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 5.5E-52 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 Vc3S01_0549 0d80a2470122073c74307cde6655ce21 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 5.5E-52 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 Vc3S01_0549 0d80a2470122073c74307cde6655ce21 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 5.5E-52 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 Vc3S01_0549 0d80a2470122073c74307cde6655ce21 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 5.5E-52 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 Vc3S01_0549 0d80a2470122073c74307cde6655ce21 172 Gene3D G3DSA:3.30.1360.80 1 172 6.2E-74 T 12-10-2018 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 Vc3S01_0549 0d80a2470122073c74307cde6655ce21 172 PIRSF PIRSF006160 1 162 2.0E-67 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 Vc3S01_0549 0d80a2470122073c74307cde6655ce21 172 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 159 35.679 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 Vc3S01_1535 bfdb62632b6f31bcb0a70a395d688232 205 Pfam PF01794 Ferric reductase like transmembrane component 50 161 1.7E-16 T 12-10-2018 IPR013130 Ferric reductase transmembrane component-like domain Vc3S01_1535 bfdb62632b6f31bcb0a70a395d688232 205 Hamap MF_01207 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ [msrQ]. 4 204 20.823 T 12-10-2018 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 Vc3S01_A0482 d5d3347a2bd5744f3141064ea58dfe77 209 SUPERFAMILY SSF52172 3 136 7.83E-36 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_A0482 d5d3347a2bd5744f3141064ea58dfe77 209 Pfam PF12840 Helix-turn-helix domain 133 188 6.9E-7 T 12-10-2018 Vc3S01_A0482 d5d3347a2bd5744f3141064ea58dfe77 209 Gene3D G3DSA:3.40.50.2300 4 117 6.2E-31 T 12-10-2018 Vc3S01_A0482 d5d3347a2bd5744f3141064ea58dfe77 209 Gene3D G3DSA:1.10.10.10 118 207 1.3E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A0482 d5d3347a2bd5744f3141064ea58dfe77 209 Pfam PF00072 Response regulator receiver domain 6 111 4.1E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A0482 d5d3347a2bd5744f3141064ea58dfe77 209 SMART SM00418 134 206 0.0052 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Vc3S01_A0482 d5d3347a2bd5744f3141064ea58dfe77 209 SUPERFAMILY SSF46785 133 204 2.63E-10 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A0482 d5d3347a2bd5744f3141064ea58dfe77 209 SMART SM00448 3 114 2.5E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A2045 181c5d6b5d651e479a6319468d771237 194 SUPERFAMILY SSF52218 2 191 2.43E-41 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Vc3S01_A2045 181c5d6b5d651e479a6319468d771237 194 Pfam PF03358 NADPH-dependent FMN reductase 57 137 1.8E-13 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 Vc3S01_A2045 181c5d6b5d651e479a6319468d771237 194 Gene3D G3DSA:3.40.50.360 1 193 5.0E-50 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Vc3S01_A0071 46ad2f859667e9fc0d19a4a3394ae7c5 266 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 125 143 - T 12-10-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 Vc3S01_A0071 46ad2f859667e9fc0d19a4a3394ae7c5 266 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 10 223 1.2E-20 T 12-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 Vc3S01_A0071 46ad2f859667e9fc0d19a4a3394ae7c5 266 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 259 9.1E-138 T 12-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 Vc3S01_A0071 46ad2f859667e9fc0d19a4a3394ae7c5 266 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 247 40.591 T 12-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 Vc3S01_A0071 46ad2f859667e9fc0d19a4a3394ae7c5 266 Gene3D G3DSA:3.40.50.1360 1 266 2.3E-118 T 12-10-2018 Vc3S01_A0071 46ad2f859667e9fc0d19a4a3394ae7c5 266 SUPERFAMILY SSF100950 1 263 9.3E-103 T 12-10-2018 IPR037171 NagB/RpiA transferase-like Vc3S01_2307 a9b3fbd371553d743322ec8218d86fa2 484 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 384 467 1.7E-19 T 12-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 Vc3S01_2307 a9b3fbd371553d743322ec8218d86fa2 484 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 3 479 5.2E-193 T 12-10-2018 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 Vc3S01_2307 a9b3fbd371553d743322ec8218d86fa2 484 Pfam PF00367 phosphotransferase system, EIIB 409 442 1.6E-14 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 Vc3S01_2307 a9b3fbd371553d743322ec8218d86fa2 484 Pfam PF02378 Phosphotransferase system, EIIC 11 324 3.0E-72 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 Vc3S01_2307 a9b3fbd371553d743322ec8218d86fa2 484 SUPERFAMILY SSF55604 406 478 4.71E-20 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 Vc3S01_2307 a9b3fbd371553d743322ec8218d86fa2 484 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 420 437 - T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 Vc3S01_2307 a9b3fbd371553d743322ec8218d86fa2 484 Gene3D G3DSA:3.30.1360.60 403 484 2.0E-25 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 Vc3S01_0989 37d651c6def4c5ac7187235c23e44d09 402 Pfam PF08708 Primase C terminal 1 (PriCT-1) 182 253 3.9E-15 T 12-10-2018 IPR014820 Primase, C-terminal 1 Vc3S01_0989 37d651c6def4c5ac7187235c23e44d09 402 Pfam PF03090 Replicase family 32 163 1.1E-46 T 12-10-2018 IPR004322 Plasmid replicase, bacterial Vc3S01_0989 37d651c6def4c5ac7187235c23e44d09 402 Gene3D G3DSA:1.10.340.50 179 294 7.6E-15 T 12-10-2018 Vc3S01_0930 721a68afba60c959c5c027f5880b46ef 126 SUPERFAMILY SSF55298 1 125 4.87E-42 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Vc3S01_0930 721a68afba60c959c5c027f5880b46ef 126 Pfam PF01042 Endoribonuclease L-PSP 8 124 4.6E-38 T 12-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 Vc3S01_0930 721a68afba60c959c5c027f5880b46ef 126 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 124 1.7E-46 T 12-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 Vc3S01_0930 721a68afba60c959c5c027f5880b46ef 126 Gene3D G3DSA:3.30.1330.40 1 126 1.8E-49 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Vc3S01_0141 d875c0865783d794bba1db41037d8a97 268 SUPERFAMILY SSF53681 8 108 1.93E-31 T 12-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Vc3S01_0141 d875c0865783d794bba1db41037d8a97 268 Hamap MF_00258 Glutamate racemase [murI]. 7 256 32.403 T 12-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Vc3S01_0141 d875c0865783d794bba1db41037d8a97 268 Pfam PF01177 Asp/Glu/Hydantoin racemase 11 215 8.8E-27 T 12-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Vc3S01_0141 d875c0865783d794bba1db41037d8a97 268 Gene3D G3DSA:3.40.50.1860 11 237 1.3E-82 T 12-10-2018 Vc3S01_0141 d875c0865783d794bba1db41037d8a97 268 Gene3D G3DSA:3.40.50.1860 99 208 1.3E-82 T 12-10-2018 Vc3S01_0141 d875c0865783d794bba1db41037d8a97 268 SUPERFAMILY SSF53681 113 262 1.85E-32 T 12-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Vc3S01_0141 d875c0865783d794bba1db41037d8a97 268 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 74 82 - T 12-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Vc3S01_0141 d875c0865783d794bba1db41037d8a97 268 TIGRFAM TIGR00067 glut_race: glutamate racemase 9 236 1.4E-67 T 12-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Vc3S01_p30093 9ee92143efd6a50fd187623755c2d590 251 Gene3D G3DSA:3.10.450.230 104 251 1.9E-39 T 12-10-2018 Vc3S01_p30093 9ee92143efd6a50fd187623755c2d590 251 Pfam PF04335 VirB8 protein 36 246 8.2E-41 T 12-10-2018 IPR007430 Bacterial virulence protein VirB8 GO:0016020 Vc3S01_p30093 9ee92143efd6a50fd187623755c2d590 251 SUPERFAMILY SSF54427 107 246 2.32E-31 T 12-10-2018 IPR032710 NTF2-like domain superfamily Vc3S01_p30093 9ee92143efd6a50fd187623755c2d590 251 PIRSF PIRSF003299 21 250 4.8E-48 T 12-10-2018 IPR026264 Type IV secretion system protein VirB8/PtlE GO:0030255 Vc3S01_2942 996be9dece12785849121657f8c4d005 209 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 204 1.8E-94 T 12-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_2942 996be9dece12785849121657f8c4d005 209 Gene3D G3DSA:2.40.50.620 32 96 2.2E-15 T 12-10-2018 Vc3S01_2942 996be9dece12785849121657f8c4d005 209 SUPERFAMILY SSF50447 1 208 5.12E-84 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Vc3S01_2942 996be9dece12785849121657f8c4d005 209 Pfam PF00297 Ribosomal protein L3 66 182 2.2E-16 T 12-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_2942 996be9dece12785849121657f8c4d005 209 ProSitePatterns PS00474 Ribosomal protein L3 signature. 101 124 - T 12-10-2018 IPR019926 Ribosomal protein L3, conserved site Vc3S01_2942 996be9dece12785849121657f8c4d005 209 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 207 40.993 T 12-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_2942 996be9dece12785849121657f8c4d005 209 Gene3D G3DSA:2.40.30.10 128 209 6.7E-20 T 12-10-2018 Vc3S01_A1508 8ee76cdb7f41f3c65b1aae147ee4f66e 623 Gene3D G3DSA:3.30.450.20 62 173 1.6E-69 T 12-10-2018 Vc3S01_A1508 8ee76cdb7f41f3c65b1aae147ee4f66e 623 SUPERFAMILY SSF103190 50 184 8.63E-23 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Vc3S01_A1508 8ee76cdb7f41f3c65b1aae147ee4f66e 623 Pfam PF00672 HAMP domain 292 343 3.4E-11 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Vc3S01_A1508 8ee76cdb7f41f3c65b1aae147ee4f66e 623 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 425 589 1.3E-44 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Vc3S01_A1508 8ee76cdb7f41f3c65b1aae147ee4f66e 623 SUPERFAMILY SSF58104 314 623 7.72E-77 T 12-10-2018 Vc3S01_A1508 8ee76cdb7f41f3c65b1aae147ee4f66e 623 Gene3D G3DSA:1.10.287.950 291 623 1.1E-72 T 12-10-2018 Vc3S01_A1508 8ee76cdb7f41f3c65b1aae147ee4f66e 623 Gene3D G3DSA:3.30.450.20 49 266 1.6E-69 T 12-10-2018 Vc3S01_A1508 8ee76cdb7f41f3c65b1aae147ee4f66e 623 SMART SM00304 292 346 1.2E-12 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Vc3S01_A1508 8ee76cdb7f41f3c65b1aae147ee4f66e 623 Pfam PF02743 Cache domain 33 254 4.9E-31 T 12-10-2018 IPR033479 Double Cache domain 1 Vc3S01_A1508 8ee76cdb7f41f3c65b1aae147ee4f66e 623 SMART SM00283 361 622 1.8E-74 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Vc3S01_0830 86105aabd1b8cfa3a302afb9dc5327bb 232 SUPERFAMILY SSF55166 20 176 3.4E-20 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Vc3S01_0830 86105aabd1b8cfa3a302afb9dc5327bb 232 Gene3D G3DSA:3.30.1380.10 4 188 1.1E-33 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Vc3S01_0830 86105aabd1b8cfa3a302afb9dc5327bb 232 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 25 177 1.1E-35 T 12-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 Vc3S01_0138 f54bcbacdf93b4f85803440274f0aa14 369 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 350 360 - T 12-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site Vc3S01_0138 f54bcbacdf93b4f85803440274f0aa14 369 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 4 368 44.81 T 12-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 Vc3S01_0138 f54bcbacdf93b4f85803440274f0aa14 369 Gene3D G3DSA:3.40.50.150 13 364 1.7E-139 T 12-10-2018 Vc3S01_0138 f54bcbacdf93b4f85803440274f0aa14 369 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 10 368 4.5E-191 T 12-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 Vc3S01_0138 f54bcbacdf93b4f85803440274f0aa14 369 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 11 368 2.7E-187 T 12-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 Vc3S01_0138 f54bcbacdf93b4f85803440274f0aa14 369 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 301 330 - T 12-10-2018 IPR030390 RNA methyltransferase TrmA, active site Vc3S01_0138 f54bcbacdf93b4f85803440274f0aa14 369 Gene3D G3DSA:3.40.1350.30 45 189 1.7E-139 T 12-10-2018 Vc3S01_0138 f54bcbacdf93b4f85803440274f0aa14 369 SUPERFAMILY SSF53335 10 367 4.59E-55 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Vc3S01_2718 52356e827c590cb4139f3eaea72fbc22 702 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 375 660 1.4E-96 T 12-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 Vc3S01_2718 52356e827c590cb4139f3eaea72fbc22 702 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 566 581 9.6E-23 T 12-10-2018 Vc3S01_2718 52356e827c590cb4139f3eaea72fbc22 702 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 619 631 9.6E-23 T 12-10-2018 Vc3S01_2718 52356e827c590cb4139f3eaea72fbc22 702 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 583 598 9.6E-23 T 12-10-2018 Vc3S01_2718 52356e827c590cb4139f3eaea72fbc22 702 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 413 432 9.6E-23 T 12-10-2018 Vc3S01_2718 52356e827c590cb4139f3eaea72fbc22 702 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 305 316 - T 12-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 Vc3S01_2718 52356e827c590cb4139f3eaea72fbc22 702 Pfam PF00391 PEP-utilising enzyme, mobile domain 274 345 4.2E-15 T 12-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 Vc3S01_2718 52356e827c590cb4139f3eaea72fbc22 702 SUPERFAMILY SSF52009 247 366 3.14E-26 T 12-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 Vc3S01_2718 52356e827c590cb4139f3eaea72fbc22 702 SUPERFAMILY SSF47831 156 265 8.89E-27 T 12-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 Vc3S01_2718 52356e827c590cb4139f3eaea72fbc22 702 Gene3D G3DSA:3.30.450.40 1 114 4.6E-29 T 12-10-2018 IPR029016 GAF-like domain superfamily Vc3S01_2718 52356e827c590cb4139f3eaea72fbc22 702 Gene3D G3DSA:3.20.20.60 354 693 2.1E-105 T 12-10-2018 Vc3S01_2718 52356e827c590cb4139f3eaea72fbc22 702 Pfam PF05524 PEP-utilising enzyme, N-terminal 126 248 7.1E-22 T 12-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 Vc3S01_2718 52356e827c590cb4139f3eaea72fbc22 702 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 125 684 9.0E-137 T 12-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 Vc3S01_2718 52356e827c590cb4139f3eaea72fbc22 702 Gene3D G3DSA:3.50.30.10 127 353 5.7E-57 T 12-10-2018 Vc3S01_2718 52356e827c590cb4139f3eaea72fbc22 702 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 566 584 - T 12-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 Vc3S01_2718 52356e827c590cb4139f3eaea72fbc22 702 SUPERFAMILY SSF51621 377 668 7.85E-98 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Vc3S01_2718 52356e827c590cb4139f3eaea72fbc22 702 Pfam PF01590 GAF domain 10 106 1.6E-10 T 12-10-2018 IPR003018 GAF domain GO:0005515 Vc3S01_2718 52356e827c590cb4139f3eaea72fbc22 702 SUPERFAMILY SSF55781 3 112 5.89E-22 T 12-10-2018 Vc3S01_2718 52356e827c590cb4139f3eaea72fbc22 702 Gene3D G3DSA:1.10.274.10 144 268 5.7E-57 T 12-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 Vc3S01_3033 d2266440d31ce76ea906dec5ec4797a9 207 SMART SM00072 3 187 1.4E-75 T 12-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit Vc3S01_3033 d2266440d31ce76ea906dec5ec4797a9 207 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 12-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 Vc3S01_3033 d2266440d31ce76ea906dec5ec4797a9 207 Gene3D G3DSA:3.30.63.10 37 96 5.2E-74 T 12-10-2018 Vc3S01_3033 d2266440d31ce76ea906dec5ec4797a9 207 Hamap MF_00328 Guanylate kinase [gmk]. 2 187 38.115 T 12-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 Vc3S01_3033 d2266440d31ce76ea906dec5ec4797a9 207 Pfam PF00625 Guanylate kinase 5 185 7.4E-62 T 12-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit Vc3S01_3033 d2266440d31ce76ea906dec5ec4797a9 207 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 4 184 5.8E-76 T 12-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 Vc3S01_3033 d2266440d31ce76ea906dec5ec4797a9 207 Gene3D G3DSA:3.40.50.300 8 183 5.2E-74 T 12-10-2018 Vc3S01_3033 d2266440d31ce76ea906dec5ec4797a9 207 SUPERFAMILY SSF52540 3 189 2.13E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A1591 6dc6f6384c0a987123ab03f235dd3f05 444 Gene3D G3DSA:3.20.20.140 56 410 1.7E-134 T 12-10-2018 Vc3S01_A1591 6dc6f6384c0a987123ab03f235dd3f05 444 Pfam PF01979 Amidohydrolase family 51 424 3.1E-19 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Vc3S01_A1591 6dc6f6384c0a987123ab03f235dd3f05 444 SUPERFAMILY SSF51556 55 371 1.13E-90 T 12-10-2018 IPR032466 Metal-dependent hydrolase Vc3S01_A1591 6dc6f6384c0a987123ab03f235dd3f05 444 ProSitePatterns PS00483 Dihydroorotase signature 2. 306 317 - T 12-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Vc3S01_A1591 6dc6f6384c0a987123ab03f235dd3f05 444 Gene3D G3DSA:2.30.40.10 6 425 1.7E-134 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Vc3S01_A1591 6dc6f6384c0a987123ab03f235dd3f05 444 SUPERFAMILY SSF51338 3 432 2.02E-28 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Vc3S01_0472 b291c9bb14c9fe4e762b51e25bc35a7e 185 Pfam PF02325 YGGT family 109 173 9.8E-20 T 12-10-2018 IPR003425 CCB3/YggT GO:0016020 Vc3S01_0472 b291c9bb14c9fe4e762b51e25bc35a7e 185 Pfam PF02325 YGGT family 10 77 1.5E-19 T 12-10-2018 IPR003425 CCB3/YggT GO:0016020 Vc3S01_0291 3012156c22ddfdc7258916ac7a5a15a3 91 SUPERFAMILY SSF75169 1 90 1.38E-22 T 12-10-2018 IPR027396 DsrEFH-like Vc3S01_0291 3012156c22ddfdc7258916ac7a5a15a3 91 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 3 90 3.3E-25 T 12-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 Vc3S01_0291 3012156c22ddfdc7258916ac7a5a15a3 91 Gene3D G3DSA:3.40.1260.10 1 90 2.0E-25 T 12-10-2018 IPR027396 DsrEFH-like Vc3S01_0291 3012156c22ddfdc7258916ac7a5a15a3 91 Pfam PF04077 DsrH like protein 10 86 5.2E-23 T 12-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 Vc3S01_0093 19172861f3b6acd6c581ed2d573a4a48 38 Pfam PF13627 Prokaryotic lipoprotein-attachment site 6 28 8.1E-9 T 12-10-2018 IPR032831 Prokaryotic lipoprotein-attachment site Vc3S01_A1964 3b2d90dd0aa5ee6e3f0c9780c424b51d 187 Gene3D G3DSA:3.40.50.850 1 184 1.8E-53 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Vc3S01_A1964 3b2d90dd0aa5ee6e3f0c9780c424b51d 187 Pfam PF00857 Isochorismatase family 4 151 6.8E-37 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 Vc3S01_A1964 3b2d90dd0aa5ee6e3f0c9780c424b51d 187 SUPERFAMILY SSF52499 2 183 4.71E-48 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Vc3S01_A1794 df60ebee9bc1a2dcfb045c55b13f17d1 867 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 238 361 4.6E-15 T 12-10-2018 IPR000014 PAS domain Vc3S01_A1794 df60ebee9bc1a2dcfb045c55b13f17d1 867 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 486 599 3.5E-30 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_A1794 df60ebee9bc1a2dcfb045c55b13f17d1 867 SMART SM00388 374 439 7.5E-23 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_A1794 df60ebee9bc1a2dcfb045c55b13f17d1 867 Gene3D G3DSA:3.30.450.20 225 364 2.2E-30 T 12-10-2018 Vc3S01_A1794 df60ebee9bc1a2dcfb045c55b13f17d1 867 Pfam PF00512 His Kinase A (phospho-acceptor) domain 374 439 1.3E-18 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_A1794 df60ebee9bc1a2dcfb045c55b13f17d1 867 Pfam PF13426 PAS domain 250 353 6.5E-16 T 12-10-2018 IPR000014 PAS domain Vc3S01_A1794 df60ebee9bc1a2dcfb045c55b13f17d1 867 SMART SM00086 312 354 4.0E-6 T 12-10-2018 IPR001610 PAC motif Vc3S01_A1794 df60ebee9bc1a2dcfb045c55b13f17d1 867 SMART SM00091 239 306 2.6E-6 T 12-10-2018 IPR000014 PAS domain Vc3S01_A1794 df60ebee9bc1a2dcfb045c55b13f17d1 867 Gene3D G3DSA:1.10.287.130 365 440 2.3E-23 T 12-10-2018 Vc3S01_A1794 df60ebee9bc1a2dcfb045c55b13f17d1 867 SMART SM00387 486 601 2.2E-38 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_A1794 df60ebee9bc1a2dcfb045c55b13f17d1 867 PRINTS PR00344 Bacterial sensor protein C-terminal signature 585 598 3.1E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_A1794 df60ebee9bc1a2dcfb045c55b13f17d1 867 PRINTS PR00344 Bacterial sensor protein C-terminal signature 526 540 3.1E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_A1794 df60ebee9bc1a2dcfb045c55b13f17d1 867 PRINTS PR00344 Bacterial sensor protein C-terminal signature 561 579 3.1E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_A1794 df60ebee9bc1a2dcfb045c55b13f17d1 867 SUPERFAMILY SSF55874 428 599 3.41E-47 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_A1794 df60ebee9bc1a2dcfb045c55b13f17d1 867 Gene3D G3DSA:3.40.50.2300 729 865 1.7E-34 T 12-10-2018 Vc3S01_A1794 df60ebee9bc1a2dcfb045c55b13f17d1 867 SUPERFAMILY SSF55785 246 354 6.98E-23 T 12-10-2018 IPR035965 PAS domain superfamily Vc3S01_A1794 df60ebee9bc1a2dcfb045c55b13f17d1 867 Gene3D G3DSA:3.30.565.10 441 603 1.3E-50 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_A1794 df60ebee9bc1a2dcfb045c55b13f17d1 867 SUPERFAMILY SSF47384 364 440 1.79E-20 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Vc3S01_A1794 df60ebee9bc1a2dcfb045c55b13f17d1 867 SMART SM00304 170 222 2.1E-5 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Vc3S01_A1794 df60ebee9bc1a2dcfb045c55b13f17d1 867 SMART SM00448 746 862 3.5E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A1794 df60ebee9bc1a2dcfb045c55b13f17d1 867 Pfam PF00072 Response regulator receiver domain 749 862 1.7E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A1794 df60ebee9bc1a2dcfb045c55b13f17d1 867 SUPERFAMILY SSF52172 745 866 3.13E-32 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_0044 5518afe72f7d2018366f3f847ee1a314 391 ProSitePatterns PS00737 Thiolases signature 2. 337 353 - T 12-10-2018 IPR020613 Thiolase, conserved site GO:0016747 Vc3S01_0044 5518afe72f7d2018366f3f847ee1a314 391 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 5 391 60.35 T 12-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 Vc3S01_0044 5518afe72f7d2018366f3f847ee1a314 391 ProSitePatterns PS00099 Thiolases active site. 372 385 - T 12-10-2018 IPR020610 Thiolase, active site GO:0016747 Vc3S01_0044 5518afe72f7d2018366f3f847ee1a314 391 Gene3D G3DSA:3.40.47.10 138 385 3.4E-151 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 Vc3S01_0044 5518afe72f7d2018366f3f847ee1a314 391 SUPERFAMILY SSF53901 266 390 8.31E-44 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 Vc3S01_0044 5518afe72f7d2018366f3f847ee1a314 391 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 7 391 1.9E-240 T 12-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 Vc3S01_0044 5518afe72f7d2018366f3f847ee1a314 391 Pfam PF02803 Thiolase, C-terminal domain 266 390 3.6E-49 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 Vc3S01_0044 5518afe72f7d2018366f3f847ee1a314 391 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 10 389 2.8E-142 T 12-10-2018 IPR002155 Thiolase GO:0016747 Vc3S01_0044 5518afe72f7d2018366f3f847ee1a314 391 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 91 109 - T 12-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 Vc3S01_0044 5518afe72f7d2018366f3f847ee1a314 391 PIRSF PIRSF000429 2 391 1.2E-132 T 12-10-2018 IPR002155 Thiolase GO:0016747 Vc3S01_0044 5518afe72f7d2018366f3f847ee1a314 391 SUPERFAMILY SSF53901 4 263 1.43E-78 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 Vc3S01_0044 5518afe72f7d2018366f3f847ee1a314 391 Gene3D G3DSA:3.40.47.10 8 271 3.4E-151 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 Vc3S01_0044 5518afe72f7d2018366f3f847ee1a314 391 Pfam PF00108 Thiolase, N-terminal domain 8 258 1.5E-83 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 Vc3S01_A1449 dcb9a7b9a1d96c404b17ac68fe30228a 468 Gene3D G3DSA:1.10.3080.10 32 468 4.0E-140 T 12-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 Vc3S01_A1449 dcb9a7b9a1d96c404b17ac68fe30228a 468 Pfam PF00654 Voltage gated chloride channel 89 437 4.4E-95 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Vc3S01_A1449 dcb9a7b9a1d96c404b17ac68fe30228a 468 SUPERFAMILY SSF81340 30 453 1.05E-113 T 12-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 Vc3S01_A1449 dcb9a7b9a1d96c404b17ac68fe30228a 468 PRINTS PR00762 Chloride channel signature 102 119 7.3E-28 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Vc3S01_A1449 dcb9a7b9a1d96c404b17ac68fe30228a 468 PRINTS PR00762 Chloride channel signature 183 202 7.3E-28 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Vc3S01_A1449 dcb9a7b9a1d96c404b17ac68fe30228a 468 PRINTS PR00762 Chloride channel signature 387 403 7.3E-28 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Vc3S01_A1449 dcb9a7b9a1d96c404b17ac68fe30228a 468 PRINTS PR00762 Chloride channel signature 352 372 7.3E-28 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Vc3S01_A1449 dcb9a7b9a1d96c404b17ac68fe30228a 468 PRINTS PR00762 Chloride channel signature 405 424 7.3E-28 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Vc3S01_A1449 dcb9a7b9a1d96c404b17ac68fe30228a 468 Hamap MF_01128 H(+)/Cl(-) exchange transporter ClcA [clcA]. 1 468 51.758 T 12-10-2018 IPR023861 Chloride channel, ClcA GO:0005887|GO:0006821|GO:0015108 Vc3S01_1136 f1ba8d66b36faea956f822121aa5ce38 548 Pfam PF02470 MlaD protein 159 218 7.2E-7 T 12-10-2018 IPR003399 Mce/MlaD Vc3S01_1136 f1ba8d66b36faea956f822121aa5ce38 548 Pfam PF02470 MlaD protein 43 134 3.9E-10 T 12-10-2018 IPR003399 Mce/MlaD Vc3S01_1136 f1ba8d66b36faea956f822121aa5ce38 548 Pfam PF02470 MlaD protein 287 391 2.2E-13 T 12-10-2018 IPR003399 Mce/MlaD Vc3S01_A0485 5ba341ce5af10132c5e94b7ec5b426b1 3480 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 3099 3141 2.2E-6 T 12-10-2018 IPR001434 Domain of unknown function DUF11 Vc3S01_A0485 5ba341ce5af10132c5e94b7ec5b426b1 3480 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 2952 2988 8.9E-4 T 12-10-2018 IPR001434 Domain of unknown function DUF11 Vc3S01_A0485 5ba341ce5af10132c5e94b7ec5b426b1 3480 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 1328 1364 6.0E-6 T 12-10-2018 IPR001434 Domain of unknown function DUF11 Vc3S01_A0485 5ba341ce5af10132c5e94b7ec5b426b1 3480 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 2388 2424 8.8E-6 T 12-10-2018 IPR001434 Domain of unknown function DUF11 Vc3S01_A0485 5ba341ce5af10132c5e94b7ec5b426b1 3480 Pfam PF01345 Domain of unknown function DUF11 3091 3203 2.4E-7 T 12-10-2018 IPR001434 Domain of unknown function DUF11 Vc3S01_A0485 5ba341ce5af10132c5e94b7ec5b426b1 3480 Pfam PF01345 Domain of unknown function DUF11 2386 2499 2.8E-8 T 12-10-2018 IPR001434 Domain of unknown function DUF11 Vc3S01_A0485 5ba341ce5af10132c5e94b7ec5b426b1 3480 Pfam PF01345 Domain of unknown function DUF11 1033 1141 4.2E-6 T 12-10-2018 IPR001434 Domain of unknown function DUF11 Vc3S01_3129 e547029dac7dfa3501a37f99185d6d18 69 Pfam PF01381 Helix-turn-helix 13 67 9.6E-16 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Vc3S01_3129 e547029dac7dfa3501a37f99185d6d18 69 SUPERFAMILY SSF47413 7 68 2.79E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Vc3S01_3129 e547029dac7dfa3501a37f99185d6d18 69 Gene3D G3DSA:1.10.260.40 1 69 1.9E-20 T 12-10-2018 Vc3S01_3129 e547029dac7dfa3501a37f99185d6d18 69 SMART SM00530 12 67 1.4E-14 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Vc3S01_A1188 6123d1807efa8f5f6d2dc1393b5fed70 983 Gene3D G3DSA:2.60.40.10 657 761 2.0E-7 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_A1188 6123d1807efa8f5f6d2dc1393b5fed70 983 Pfam PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase 785 855 6.6E-7 T 12-10-2018 IPR018905 Alpha-galactosidase, NEW3 domain Vc3S01_A1188 6123d1807efa8f5f6d2dc1393b5fed70 983 Pfam PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase 670 743 8.4E-9 T 12-10-2018 IPR018905 Alpha-galactosidase, NEW3 domain Vc3S01_A1188 6123d1807efa8f5f6d2dc1393b5fed70 983 Pfam PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase 556 628 1.3E-5 T 12-10-2018 IPR018905 Alpha-galactosidase, NEW3 domain Vc3S01_A1188 6123d1807efa8f5f6d2dc1393b5fed70 983 Pfam PF05548 Gametolysin peptidase M11 275 405 5.6E-11 T 12-10-2018 IPR008752 Peptidase M11, gametolysin Vc3S01_A1188 6123d1807efa8f5f6d2dc1393b5fed70 983 SUPERFAMILY SSF55486 241 397 3.29E-12 T 12-10-2018 Vc3S01_A1438 f8b44199402a9889c5401833e19f5671 296 Gene3D G3DSA:3.40.190.290 95 270 1.1E-7 T 12-10-2018 Vc3S01_A1438 f8b44199402a9889c5401833e19f5671 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 5.2E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A1438 f8b44199402a9889c5401833e19f5671 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 5.2E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A1438 f8b44199402a9889c5401833e19f5671 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 5.2E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A1438 f8b44199402a9889c5401833e19f5671 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 2.2E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A1438 f8b44199402a9889c5401833e19f5671 296 SUPERFAMILY SSF53850 92 282 4.89E-15 T 12-10-2018 Vc3S01_A1438 f8b44199402a9889c5401833e19f5671 296 Gene3D G3DSA:1.10.10.10 3 91 1.4E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A1438 f8b44199402a9889c5401833e19f5671 296 Pfam PF03466 LysR substrate binding domain 96 250 7.5E-9 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_A1438 f8b44199402a9889c5401833e19f5671 296 SUPERFAMILY SSF46785 5 87 3.41E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_2770 ae285fe2609493a180de68393a4d942f 909 SUPERFAMILY SSF81886 620 897 6.41E-84 T 12-10-2018 IPR036266 SecA, Wing/Scaffold superfamily Vc3S01_2770 ae285fe2609493a180de68393a4d942f 909 Gene3D G3DSA:1.10.3060.10 621 833 4.1E-76 T 12-10-2018 Vc3S01_2770 ae285fe2609493a180de68393a4d942f 909 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 816 0.0 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Vc3S01_2770 ae285fe2609493a180de68393a4d942f 909 SMART SM00957 6 403 0.0 T 12-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 Vc3S01_2770 ae285fe2609493a180de68393a4d942f 909 Gene3D G3DSA:3.40.50.300 22 416 2.3E-176 T 12-10-2018 Vc3S01_2770 ae285fe2609493a180de68393a4d942f 909 Gene3D G3DSA:3.90.1440.10 229 369 2.3E-176 T 12-10-2018 Vc3S01_2770 ae285fe2609493a180de68393a4d942f 909 SUPERFAMILY SSF81767 227 369 1.57E-42 T 12-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 Vc3S01_2770 ae285fe2609493a180de68393a4d942f 909 Pfam PF07517 SecA DEAD-like domain 7 403 3.0E-133 T 12-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 Vc3S01_2770 ae285fe2609493a180de68393a4d942f 909 SUPERFAMILY SSF52540 5 416 3.67E-85 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2770 ae285fe2609493a180de68393a4d942f 909 PRINTS PR00906 SecA protein signature 117 127 3.2E-72 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Vc3S01_2770 ae285fe2609493a180de68393a4d942f 909 PRINTS PR00906 SecA protein signature 340 362 3.2E-72 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Vc3S01_2770 ae285fe2609493a180de68393a4d942f 909 PRINTS PR00906 SecA protein signature 414 427 3.2E-72 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Vc3S01_2770 ae285fe2609493a180de68393a4d942f 909 PRINTS PR00906 SecA protein signature 63 87 3.2E-72 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Vc3S01_2770 ae285fe2609493a180de68393a4d942f 909 PRINTS PR00906 SecA protein signature 170 190 3.2E-72 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Vc3S01_2770 ae285fe2609493a180de68393a4d942f 909 PRINTS PR00906 SecA protein signature 377 394 3.2E-72 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Vc3S01_2770 ae285fe2609493a180de68393a4d942f 909 PRINTS PR00906 SecA protein signature 101 115 3.2E-72 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Vc3S01_2770 ae285fe2609493a180de68393a4d942f 909 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 20.028 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Vc3S01_2770 ae285fe2609493a180de68393a4d942f 909 Pfam PF02810 SEC-C motif 889 907 3.3E-10 T 12-10-2018 IPR004027 SEC-C motif Vc3S01_2770 ae285fe2609493a180de68393a4d942f 909 ProSitePatterns PS01312 SecA family signature. 501 516 - T 12-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 Vc3S01_2770 ae285fe2609493a180de68393a4d942f 909 SUPERFAMILY SSF52540 418 610 4.56E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2770 ae285fe2609493a180de68393a4d942f 909 Gene3D G3DSA:3.40.50.300 418 620 2.4E-87 T 12-10-2018 Vc3S01_2770 ae285fe2609493a180de68393a4d942f 909 Pfam PF07516 SecA Wing and Scaffold domain 617 829 1.3E-66 T 12-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 Vc3S01_2770 ae285fe2609493a180de68393a4d942f 909 Pfam PF01043 SecA preprotein cross-linking domain 232 359 2.0E-38 T 12-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 Vc3S01_2770 ae285fe2609493a180de68393a4d942f 909 SMART SM00958 228 359 6.3E-81 T 12-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 Vc3S01_1587 9519878afda967547a889e1426254d34 298 Pfam PF13714 Phosphoenolpyruvate phosphomutase 14 258 1.9E-45 T 12-10-2018 Vc3S01_1587 9519878afda967547a889e1426254d34 298 ProSitePatterns PS00161 Isocitrate lyase signature. 119 124 - T 12-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 Vc3S01_1587 9519878afda967547a889e1426254d34 298 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 6 295 1.1E-127 T 12-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 Vc3S01_1587 9519878afda967547a889e1426254d34 298 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 3 296 49.841 T 12-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 Vc3S01_1587 9519878afda967547a889e1426254d34 298 SUPERFAMILY SSF51621 5 294 3.05E-94 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Vc3S01_1587 9519878afda967547a889e1426254d34 298 Gene3D G3DSA:3.20.20.60 2 298 3.3E-98 T 12-10-2018 Vc3S01_1025 c1756083e97a81d5252180494358f79e 200 Pfam PF01464 Transglycosylase SLT domain 14 115 9.1E-11 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 Vc3S01_1025 c1756083e97a81d5252180494358f79e 200 Gene3D G3DSA:1.10.530.10 13 177 2.2E-9 T 12-10-2018 Vc3S01_1025 c1756083e97a81d5252180494358f79e 200 SUPERFAMILY SSF53955 17 134 3.38E-10 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily Vc3S01_A1167 d635a287af13b70fe526e34be0c2bbbd 169 Pfam PF13302 Acetyltransferase (GNAT) domain 8 148 6.5E-28 T 12-10-2018 IPR000182 GNAT domain Vc3S01_A1167 d635a287af13b70fe526e34be0c2bbbd 169 SUPERFAMILY SSF55729 2 153 3.36E-38 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_A1167 d635a287af13b70fe526e34be0c2bbbd 169 Gene3D G3DSA:3.40.630.30 1 166 1.1E-40 T 12-10-2018 Vc3S01_1908 4becf09eb71ca569eeed5accca9f2bde 231 PIRSF PIRSF028111 1 230 2.1E-85 T 12-10-2018 IPR016868 Bacteriophage B3, Orf5 Vc3S01_1908 4becf09eb71ca569eeed5accca9f2bde 231 Pfam PF10979 Protein of unknown function (DUF2786) 5 42 2.8E-12 T 12-10-2018 IPR024498 Domain of unknown function DUF2786 Vc3S01_3009 b599e7839223f9d627e9532763988061 78 Pfam PF00830 Ribosomal L28 family 3 62 2.6E-26 T 12-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_3009 b599e7839223f9d627e9532763988061 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.372 T 12-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_3009 b599e7839223f9d627e9532763988061 78 Gene3D G3DSA:2.30.170.40 2 78 4.9E-33 T 12-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_3009 b599e7839223f9d627e9532763988061 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 8.7E-28 T 12-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_3009 b599e7839223f9d627e9532763988061 78 SUPERFAMILY SSF143800 2 76 4.91E-30 T 12-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_1474 24d6426766d1eddb2d2636e29e31a69f 173 SUPERFAMILY SSF55144 1 171 1.22E-31 T 12-10-2018 IPR009097 Cyclic phosphodiesterase Vc3S01_1474 24d6426766d1eddb2d2636e29e31a69f 173 Pfam PF13563 2'-5' RNA ligase superfamily 21 156 5.8E-14 T 12-10-2018 Vc3S01_1474 24d6426766d1eddb2d2636e29e31a69f 173 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 1 173 20.479 T 12-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 Vc3S01_1474 24d6426766d1eddb2d2636e29e31a69f 173 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 1 171 7.0E-37 T 12-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 Vc3S01_1474 24d6426766d1eddb2d2636e29e31a69f 173 Gene3D G3DSA:3.90.1140.10 1 173 9.2E-39 T 12-10-2018 Vc3S01_A1819 bd1b6ec8596112395213414c32d6cc96 381 Pfam PF01594 AI-2E family transporter 24 347 7.4E-34 T 12-10-2018 IPR002549 Transmembrane protein TqsA-like Vc3S01_A1804 12a3fd8da2aef65b6fca15ad7518cee8 480 Pfam PF00512 His Kinase A (phospho-acceptor) domain 265 326 5.3E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_A1804 12a3fd8da2aef65b6fca15ad7518cee8 480 SUPERFAMILY SSF47384 258 326 1.08E-14 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Vc3S01_A1804 12a3fd8da2aef65b6fca15ad7518cee8 480 Gene3D G3DSA:3.30.450.20 52 173 1.5E-7 T 12-10-2018 Vc3S01_A1804 12a3fd8da2aef65b6fca15ad7518cee8 480 Pfam PF14827 Double sensory domain of two-component sensor kinase 100 175 4.9E-6 T 12-10-2018 IPR029150 Double Cache domain 3 Vc3S01_A1804 12a3fd8da2aef65b6fca15ad7518cee8 480 SUPERFAMILY SSF103190 99 183 2.86E-12 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Vc3S01_A1804 12a3fd8da2aef65b6fca15ad7518cee8 480 Gene3D G3DSA:3.30.565.10 325 479 1.1E-28 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_A1804 12a3fd8da2aef65b6fca15ad7518cee8 480 SMART SM00388 262 327 1.7E-17 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_A1804 12a3fd8da2aef65b6fca15ad7518cee8 480 SMART SM00387 372 479 7.0E-20 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_A1804 12a3fd8da2aef65b6fca15ad7518cee8 480 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 373 478 3.9E-14 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_A1804 12a3fd8da2aef65b6fca15ad7518cee8 480 SUPERFAMILY SSF55874 316 478 1.27E-30 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_A1804 12a3fd8da2aef65b6fca15ad7518cee8 480 Gene3D G3DSA:1.10.287.130 256 324 1.1E-14 T 12-10-2018 Vc3S01_3050 aaf79306105809c807e8d520675be412 275 Gene3D G3DSA:3.40.190.80 161 264 3.5E-26 T 12-10-2018 Vc3S01_3050 aaf79306105809c807e8d520675be412 275 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 10 260 4.0E-106 T 12-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 Vc3S01_3050 aaf79306105809c807e8d520675be412 275 Pfam PF00459 Inositol monophosphatase family 7 253 3.9E-51 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Vc3S01_3050 aaf79306105809c807e8d520675be412 275 Gene3D G3DSA:3.30.540.10 6 160 2.7E-45 T 12-10-2018 Vc3S01_3050 aaf79306105809c807e8d520675be412 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 65 81 9.0E-6 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Vc3S01_3050 aaf79306105809c807e8d520675be412 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 89 105 9.0E-6 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Vc3S01_3050 aaf79306105809c807e8d520675be412 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 43 63 9.0E-6 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Vc3S01_3050 aaf79306105809c807e8d520675be412 275 SUPERFAMILY SSF56655 6 272 7.07E-78 T 12-10-2018 Vc3S01_3050 aaf79306105809c807e8d520675be412 275 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 10 262 39.242 T 12-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 Vc3S01_1232 cfb914bb144845e30181661397c9c399 228 Pfam PF13247 4Fe-4S dicluster domain 88 186 3.0E-26 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Vc3S01_1232 cfb914bb144845e30181661397c9c399 228 Pfam PF12800 4Fe-4S binding domain 49 61 0.063 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Vc3S01_1232 cfb914bb144845e30181661397c9c399 228 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 130 141 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Vc3S01_1232 cfb914bb144845e30181661397c9c399 228 Gene3D G3DSA:3.30.70.20 33 227 1.1E-59 T 12-10-2018 Vc3S01_1232 cfb914bb144845e30181661397c9c399 228 TIGRFAM TIGR03149 cyt_nit_nrfC: cytochrome c nitrite reductase, Fe-S protein 2 227 3.6E-131 T 12-10-2018 IPR017567 Cytochrome c nitrite reductase, Fe-S protein Vc3S01_1232 cfb914bb144845e30181661397c9c399 228 SUPERFAMILY SSF54862 39 220 1.57E-65 T 12-10-2018 Vc3S01_0073 d1293a25aaab19a6a2dfea2fa5d48e35 304 TIGRFAM TIGR00688 rarD: protein RarD 11 264 1.4E-85 T 12-10-2018 IPR004626 RarD protein GO:0005887 Vc3S01_0073 d1293a25aaab19a6a2dfea2fa5d48e35 304 Pfam PF00892 EamA-like transporter family 155 287 3.3E-6 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Vc3S01_0073 d1293a25aaab19a6a2dfea2fa5d48e35 304 Pfam PF00892 EamA-like transporter family 12 145 2.3E-15 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Vc3S01_0073 d1293a25aaab19a6a2dfea2fa5d48e35 304 SUPERFAMILY SSF103481 191 291 1.7E-9 T 12-10-2018 Vc3S01_0073 d1293a25aaab19a6a2dfea2fa5d48e35 304 SUPERFAMILY SSF103481 49 146 1.18E-13 T 12-10-2018 Vc3S01_1129 bfd867bc9736c3d7df6f9b3ce9f5656a 391 Pfam PF14559 Tetratricopeptide repeat 194 248 3.4E-6 T 12-10-2018 Vc3S01_1129 bfd867bc9736c3d7df6f9b3ce9f5656a 391 Gene3D G3DSA:1.25.40.10 21 357 3.7E-34 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_1129 bfd867bc9736c3d7df6f9b3ce9f5656a 391 SMART SM00028 141 174 460.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_1129 bfd867bc9736c3d7df6f9b3ce9f5656a 391 SMART SM00028 182 215 0.064 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_1129 bfd867bc9736c3d7df6f9b3ce9f5656a 391 SMART SM00028 216 249 24.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_1129 bfd867bc9736c3d7df6f9b3ce9f5656a 391 SMART SM00028 69 102 81.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_1129 bfd867bc9736c3d7df6f9b3ce9f5656a 391 SUPERFAMILY SSF48452 37 97 5.84E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_1129 bfd867bc9736c3d7df6f9b3ce9f5656a 391 Pfam PF13176 Tetratricopeptide repeat 71 94 0.025 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_1129 bfd867bc9736c3d7df6f9b3ce9f5656a 391 SUPERFAMILY SSF48452 109 285 1.59E-19 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_1129 bfd867bc9736c3d7df6f9b3ce9f5656a 391 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 4 389 36.884 T 12-10-2018 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 Vc3S01_2094 e3e572b36e1ec7e6602947b98d78a832 812 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 372 386 5.6E-31 T 12-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 Vc3S01_2094 e3e572b36e1ec7e6602947b98d78a832 812 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 432 450 5.6E-31 T 12-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 Vc3S01_2094 e3e572b36e1ec7e6602947b98d78a832 812 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 456 471 5.6E-31 T 12-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 Vc3S01_2094 e3e572b36e1ec7e6602947b98d78a832 812 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 97 115 5.6E-31 T 12-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 Vc3S01_2094 e3e572b36e1ec7e6602947b98d78a832 812 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 390 406 5.6E-31 T 12-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 Vc3S01_2094 e3e572b36e1ec7e6602947b98d78a832 812 Gene3D G3DSA:2.60.120.380 587 691 4.3E-13 T 12-10-2018 Vc3S01_2094 e3e572b36e1ec7e6602947b98d78a832 812 Gene3D G3DSA:2.60.120.380 711 811 1.4E-7 T 12-10-2018 Vc3S01_2094 e3e572b36e1ec7e6602947b98d78a832 812 Pfam PF08453 Peptidase family M9 N-terminal 31 210 5.4E-51 T 12-10-2018 IPR013661 Peptidase M9, collagenase, N-terminal domain Vc3S01_2094 e3e572b36e1ec7e6602947b98d78a832 812 Pfam PF01752 Collagenase 272 556 1.3E-110 T 12-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 Vc3S01_2094 e3e572b36e1ec7e6602947b98d78a832 812 Gene3D G3DSA:1.10.1740.190 301 448 7.4E-35 T 12-10-2018 Vc3S01_A2038 7b6e678e64810a92559ed9c75804eb72 619 SMART SM00267 208 374 1.4E-13 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A2038 7b6e678e64810a92559ed9c75804eb72 619 SUPERFAMILY SSF141868 393 618 7.45E-41 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_A2038 7b6e678e64810a92559ed9c75804eb72 619 Gene3D G3DSA:3.20.20.450 383 618 4.6E-40 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_A2038 7b6e678e64810a92559ed9c75804eb72 619 Pfam PF00990 Diguanylate cyclase, GGDEF domain 219 368 1.7E-13 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A2038 7b6e678e64810a92559ed9c75804eb72 619 Pfam PF00563 EAL domain 393 617 1.1E-39 T 12-10-2018 IPR001633 EAL domain Vc3S01_A2038 7b6e678e64810a92559ed9c75804eb72 619 Gene3D G3DSA:3.30.1040.50 84 133 4.0E-18 T 12-10-2018 Vc3S01_A2038 7b6e678e64810a92559ed9c75804eb72 619 Pfam PF16448 LapD/MoxY periplasmic domain 5 128 3.8E-40 T 12-10-2018 IPR032244 LapD/MoxY, periplasmic domain Vc3S01_A2038 7b6e678e64810a92559ed9c75804eb72 619 SUPERFAMILY SSF55073 225 373 5.81E-18 T 12-10-2018 IPR029787 Nucleotide cyclase Vc3S01_A2038 7b6e678e64810a92559ed9c75804eb72 619 SMART SM00052 385 617 2.6E-10 T 12-10-2018 IPR001633 EAL domain Vc3S01_A2038 7b6e678e64810a92559ed9c75804eb72 619 Gene3D G3DSA:3.30.70.270 205 374 2.5E-21 T 12-10-2018 Vc3S01_A1321 6a090edd677785965789d8def39d87aa 622 SUPERFAMILY SSF158682 515 615 6.28E-5 T 12-10-2018 IPR029024 TerB-like Vc3S01_A1321 6a090edd677785965789d8def39d87aa 622 Pfam PF01435 Peptidase family M48 104 329 6.8E-28 T 12-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 Vc3S01_A1321 6a090edd677785965789d8def39d87aa 622 Gene3D G3DSA:3.30.2010.10 93 188 1.9E-32 T 12-10-2018 Vc3S01_3089 2f80bee3e40c8668c80f7f6479bff123 353 SMART SM01004 9 333 8.4E-246 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Vc3S01_3089 2f80bee3e40c8668c80f7f6479bff123 353 SUPERFAMILY SSF51569 7 335 3.22E-145 T 12-10-2018 Vc3S01_3089 2f80bee3e40c8668c80f7f6479bff123 353 Pfam PF00490 Delta-aminolevulinic acid dehydratase 12 332 1.7E-141 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Vc3S01_3089 2f80bee3e40c8668c80f7f6479bff123 353 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 198 217 1.7E-57 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Vc3S01_3089 2f80bee3e40c8668c80f7f6479bff123 353 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 277 292 1.7E-57 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Vc3S01_3089 2f80bee3e40c8668c80f7f6479bff123 353 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 307 326 1.7E-57 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Vc3S01_3089 2f80bee3e40c8668c80f7f6479bff123 353 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 129 143 1.7E-57 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Vc3S01_3089 2f80bee3e40c8668c80f7f6479bff123 353 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 252 268 1.7E-57 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Vc3S01_3089 2f80bee3e40c8668c80f7f6479bff123 353 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 160 179 1.7E-57 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Vc3S01_3089 2f80bee3e40c8668c80f7f6479bff123 353 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 252 264 - T 12-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Vc3S01_3089 2f80bee3e40c8668c80f7f6479bff123 353 Gene3D G3DSA:3.20.20.70 2 337 3.9E-148 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_3089 2f80bee3e40c8668c80f7f6479bff123 353 PIRSF PIRSF001415 2 336 1.1E-152 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Vc3S01_p30089 ce399ae4490143d71d6fdac901faa4b6 338 Gene3D G3DSA:3.40.50.300 121 337 1.5E-62 T 12-10-2018 Vc3S01_p30089 ce399ae4490143d71d6fdac901faa4b6 338 Pfam PF00437 Type II/IV secretion system protein 20 313 1.3E-52 T 12-10-2018 IPR001482 Type II/IV secretion system protein Vc3S01_p30089 ce399ae4490143d71d6fdac901faa4b6 338 SUPERFAMILY SSF52540 10 316 5.01E-41 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_p30089 ce399ae4490143d71d6fdac901faa4b6 338 Gene3D G3DSA:3.30.450.90 13 120 3.1E-30 T 12-10-2018 Vc3S01_p30089 ce399ae4490143d71d6fdac901faa4b6 338 TIGRFAM TIGR02788 VirB11: P-type DNA transfer ATPase VirB11 22 323 6.8E-101 T 12-10-2018 IPR014155 Type IV secretion system protein VirB11 GO:0043684|GO:0044097 Vc3S01_A2036 913099f90d0a3a827b09ce40aff44c31 463 Gene3D G3DSA:2.40.50.100 71 140 9.5E-7 T 12-10-2018 Vc3S01_A2036 913099f90d0a3a827b09ce40aff44c31 463 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 31 463 4.0E-135 T 12-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 Vc3S01_A2036 913099f90d0a3a827b09ce40aff44c31 463 Pfam PF13533 Biotin-lipoyl like 75 108 5.0E-7 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain Vc3S01_A2036 913099f90d0a3a827b09ce40aff44c31 463 SUPERFAMILY SSF56954 171 259 5.23E-6 T 12-10-2018 Vc3S01_A2036 913099f90d0a3a827b09ce40aff44c31 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 428 443 1.3E-48 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Vc3S01_A2036 913099f90d0a3a827b09ce40aff44c31 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 443 463 1.3E-48 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Vc3S01_A2036 913099f90d0a3a827b09ce40aff44c31 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 82 102 1.3E-48 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Vc3S01_A2036 913099f90d0a3a827b09ce40aff44c31 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 40 63 1.3E-48 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Vc3S01_A2036 913099f90d0a3a827b09ce40aff44c31 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 329 350 1.3E-48 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Vc3S01_A2036 913099f90d0a3a827b09ce40aff44c31 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 386 409 1.3E-48 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Vc3S01_A2036 913099f90d0a3a827b09ce40aff44c31 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 362 386 1.3E-48 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Vc3S01_A2036 913099f90d0a3a827b09ce40aff44c31 463 Pfam PF13437 HlyD family secretion protein 316 423 9.6E-18 T 12-10-2018 Vc3S01_A2036 913099f90d0a3a827b09ce40aff44c31 463 ProSitePatterns PS00543 HlyD family secretion proteins signature. 428 450 - T 12-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 Vc3S01_A2036 913099f90d0a3a827b09ce40aff44c31 463 SUPERFAMILY SSF111369 64 140 4.71E-6 T 12-10-2018 Vc3S01_0014 dac0ee6f69d46c969b91e276c15e2139 665 Gene3D G3DSA:3.40.50.150 155 469 2.1E-82 T 12-10-2018 Vc3S01_0014 dac0ee6f69d46c969b91e276c15e2139 665 Gene3D G3DSA:1.20.1260.30 2 71 2.1E-5 T 12-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily Vc3S01_0014 dac0ee6f69d46c969b91e276c15e2139 665 Pfam PF12161 HsdM N-terminal domain 12 142 1.9E-17 T 12-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain Vc3S01_0014 dac0ee6f69d46c969b91e276c15e2139 665 SUPERFAMILY SSF53335 11 519 3.68E-109 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Vc3S01_0014 dac0ee6f69d46c969b91e276c15e2139 665 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 210 224 2.1E-9 T 12-10-2018 Vc3S01_0014 dac0ee6f69d46c969b91e276c15e2139 665 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 177 193 2.1E-9 T 12-10-2018 Vc3S01_0014 dac0ee6f69d46c969b91e276c15e2139 665 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 282 294 2.1E-9 T 12-10-2018 Vc3S01_0014 dac0ee6f69d46c969b91e276c15e2139 665 Pfam PF02384 N-6 DNA Methylase 155 455 6.5E-57 T 12-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 Vc3S01_2687 25b3422d7275e4db0155ebcc745f24bb 392 SUPERFAMILY SSF53850 109 295 6.3E-56 T 12-10-2018 Vc3S01_2687 25b3422d7275e4db0155ebcc745f24bb 392 Gene3D G3DSA:3.40.190.10 113 287 6.9E-55 T 12-10-2018 Vc3S01_2687 25b3422d7275e4db0155ebcc745f24bb 392 SMART SM00830 12 93 6.2E-21 T 12-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Vc3S01_2687 25b3422d7275e4db0155ebcc745f24bb 392 TIGRFAM TIGR01797 CM_P_1: chorismate mutase 9 91 3.5E-27 T 12-10-2018 IPR010952 Chorismate mutase, gammaproteobacteria GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 Vc3S01_2687 25b3422d7275e4db0155ebcc745f24bb 392 SUPERFAMILY SSF48600 7 95 1.41E-18 T 12-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Vc3S01_2687 25b3422d7275e4db0155ebcc745f24bb 392 Pfam PF00800 Prephenate dehydratase 110 291 2.5E-60 T 12-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 Vc3S01_2687 25b3422d7275e4db0155ebcc745f24bb 392 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 265 287 - T 12-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 Vc3S01_2687 25b3422d7275e4db0155ebcc745f24bb 392 Gene3D G3DSA:3.40.190.10 193 278 6.9E-55 T 12-10-2018 Vc3S01_2687 25b3422d7275e4db0155ebcc745f24bb 392 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 329 336 - T 12-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 Vc3S01_2687 25b3422d7275e4db0155ebcc745f24bb 392 PIRSF PIRSF001500 1 384 9.8E-141 T 12-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 Vc3S01_2687 25b3422d7275e4db0155ebcc745f24bb 392 Pfam PF01817 Chorismate mutase type II 12 91 2.9E-16 T 12-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Vc3S01_2687 25b3422d7275e4db0155ebcc745f24bb 392 Gene3D G3DSA:1.20.59.10 3 112 2.0E-30 T 12-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Vc3S01_2687 25b3422d7275e4db0155ebcc745f24bb 392 SUPERFAMILY SSF55021 284 381 7.2E-26 T 12-10-2018 Vc3S01_2687 25b3422d7275e4db0155ebcc745f24bb 392 Gene3D G3DSA:3.30.70.260 295 383 1.9E-24 T 12-10-2018 Vc3S01_0583 dc0d69dba4d3d6eb0e2ef11c1b9141c5 148 Gene3D G3DSA:1.20.120.910 17 147 1.2E-35 T 12-10-2018 Vc3S01_0583 dc0d69dba4d3d6eb0e2ef11c1b9141c5 148 SUPERFAMILY SSF109635 8 106 6.8E-37 T 12-10-2018 IPR037187 DksA, N-terminal domain superfamily Vc3S01_0583 dc0d69dba4d3d6eb0e2ef11c1b9141c5 148 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 25 147 29.508 T 12-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 Vc3S01_0583 dc0d69dba4d3d6eb0e2ef11c1b9141c5 148 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 108 140 4.4E-10 T 12-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 Vc3S01_0583 dc0d69dba4d3d6eb0e2ef11c1b9141c5 148 SUPERFAMILY SSF57716 108 146 6.41E-10 T 12-10-2018 Vc3S01_0583 dc0d69dba4d3d6eb0e2ef11c1b9141c5 148 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 111 135 - T 12-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site Vc3S01_0583 dc0d69dba4d3d6eb0e2ef11c1b9141c5 148 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 29 137 5.9E-51 T 12-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 Vc3S01_0583 dc0d69dba4d3d6eb0e2ef11c1b9141c5 148 PRINTS PR00618 DksA/TraR zinc finger signature 111 122 8.9E-5 T 12-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria Vc3S01_0583 dc0d69dba4d3d6eb0e2ef11c1b9141c5 148 PRINTS PR00618 DksA/TraR zinc finger signature 123 135 8.9E-5 T 12-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria Vc3S01_1195 00c6a08f8c7264a8b86d0c34f67fff44 849 SUPERFAMILY SSF55874 531 683 3.93E-27 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_1195 00c6a08f8c7264a8b86d0c34f67fff44 849 Gene3D G3DSA:3.40.50.2300 709 848 9.3E-32 T 12-10-2018 Vc3S01_1195 00c6a08f8c7264a8b86d0c34f67fff44 849 SUPERFAMILY SSF52172 721 838 3.56E-29 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_1195 00c6a08f8c7264a8b86d0c34f67fff44 849 SMART SM00387 574 683 1.5E-22 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_1195 00c6a08f8c7264a8b86d0c34f67fff44 849 Pfam PF00512 His Kinase A (phospho-acceptor) domain 464 526 1.1E-6 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_1195 00c6a08f8c7264a8b86d0c34f67fff44 849 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 581 680 1.0E-13 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_1195 00c6a08f8c7264a8b86d0c34f67fff44 849 Gene3D G3DSA:3.30.565.10 534 688 1.8E-26 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_1195 00c6a08f8c7264a8b86d0c34f67fff44 849 SUPERFAMILY SSF47384 452 516 7.65E-6 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Vc3S01_1195 00c6a08f8c7264a8b86d0c34f67fff44 849 SMART SM00448 721 831 2.7E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_1195 00c6a08f8c7264a8b86d0c34f67fff44 849 Pfam PF00072 Response regulator receiver domain 723 830 2.8E-21 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_1195 00c6a08f8c7264a8b86d0c34f67fff44 849 PRINTS PR00344 Bacterial sensor protein C-terminal signature 643 661 5.2E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_1195 00c6a08f8c7264a8b86d0c34f67fff44 849 PRINTS PR00344 Bacterial sensor protein C-terminal signature 667 680 5.2E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_1195 00c6a08f8c7264a8b86d0c34f67fff44 849 PRINTS PR00344 Bacterial sensor protein C-terminal signature 613 627 5.2E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_1195 00c6a08f8c7264a8b86d0c34f67fff44 849 PRINTS PR00344 Bacterial sensor protein C-terminal signature 631 641 5.2E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_1195 00c6a08f8c7264a8b86d0c34f67fff44 849 Gene3D G3DSA:1.10.287.130 423 525 7.9E-6 T 12-10-2018 Vc3S01_1195 00c6a08f8c7264a8b86d0c34f67fff44 849 SMART SM00388 461 530 4.0E-5 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_2051 c9fc6a34eb52fdc4e7224affae7573ee 357 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 321 333 - T 12-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 Vc3S01_2051 c9fc6a34eb52fdc4e7224affae7573ee 357 Gene3D G3DSA:3.30.230.40 257 357 7.4E-37 T 12-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 Vc3S01_2051 c9fc6a34eb52fdc4e7224affae7573ee 357 Gene3D G3DSA:3.30.230.40 166 256 1.1E-35 T 12-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 Vc3S01_2051 c9fc6a34eb52fdc4e7224affae7573ee 357 SUPERFAMILY SSF54211 254 344 4.05E-31 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Vc3S01_2051 c9fc6a34eb52fdc4e7224affae7573ee 357 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 6 147 2.2E-47 T 12-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 Vc3S01_2051 c9fc6a34eb52fdc4e7224affae7573ee 357 Gene3D G3DSA:3.40.50.1000 1 165 2.2E-46 T 12-10-2018 IPR023214 HAD superfamily Vc3S01_2051 c9fc6a34eb52fdc4e7224affae7573ee 357 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 228 241 - T 12-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 Vc3S01_2051 c9fc6a34eb52fdc4e7224affae7573ee 357 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 169 357 37.756 T 12-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 Vc3S01_2051 c9fc6a34eb52fdc4e7224affae7573ee 357 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 4 357 51.062 T 12-10-2018 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15 Vc3S01_2051 c9fc6a34eb52fdc4e7224affae7573ee 357 SUPERFAMILY SSF54211 169 253 2.15E-32 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Vc3S01_2051 c9fc6a34eb52fdc4e7224affae7573ee 357 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 6 151 9.7E-28 T 12-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 Vc3S01_2051 c9fc6a34eb52fdc4e7224affae7573ee 357 SUPERFAMILY SSF56784 3 158 1.04E-38 T 12-10-2018 IPR036412 HAD-like superfamily Vc3S01_2051 c9fc6a34eb52fdc4e7224affae7573ee 357 Pfam PF08645 Polynucleotide kinase 3 phosphatase 6 132 3.0E-5 T 12-10-2018 IPR013954 Polynucleotide kinase 3 phosphatase Reactome: R-HSA-5649702 Vc3S01_2051 c9fc6a34eb52fdc4e7224affae7573ee 357 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 5 164 4.3E-79 T 12-10-2018 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15 Vc3S01_2051 c9fc6a34eb52fdc4e7224affae7573ee 357 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 198 339 8.8E-66 T 12-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 Vc3S01_A0646 cff739b96f32a1b3986309556ebe4b4c 472 Gene3D G3DSA:3.40.640.10 95 466 1.4E-103 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Vc3S01_A0646 cff739b96f32a1b3986309556ebe4b4c 472 SMART SM00345 22 81 4.5E-16 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Vc3S01_A0646 cff739b96f32a1b3986309556ebe4b4c 472 SUPERFAMILY SSF46785 15 82 8.46E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A0646 cff739b96f32a1b3986309556ebe4b4c 472 Pfam PF00155 Aminotransferase class I and II 141 433 3.5E-25 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Vc3S01_A0646 cff739b96f32a1b3986309556ebe4b4c 472 Pfam PF00392 Bacterial regulatory proteins, gntR family 24 81 1.4E-13 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Vc3S01_A0646 cff739b96f32a1b3986309556ebe4b4c 472 Gene3D G3DSA:1.10.10.10 12 82 1.4E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A0646 cff739b96f32a1b3986309556ebe4b4c 472 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 55 71 5.0E-6 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Vc3S01_A0646 cff739b96f32a1b3986309556ebe4b4c 472 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 55 5.0E-6 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Vc3S01_A0646 cff739b96f32a1b3986309556ebe4b4c 472 SUPERFAMILY SSF53383 112 471 9.68E-77 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Vc3S01_A1332 e75b891407fc1229a4d34fffeed4dea1 301 Gene3D G3DSA:1.10.10.10 1 86 1.5E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A1332 e75b891407fc1229a4d34fffeed4dea1 301 Gene3D G3DSA:3.40.190.10 169 267 2.4E-46 T 12-10-2018 Vc3S01_A1332 e75b891407fc1229a4d34fffeed4dea1 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.2E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A1332 e75b891407fc1229a4d34fffeed4dea1 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.2E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A1332 e75b891407fc1229a4d34fffeed4dea1 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.2E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A1332 e75b891407fc1229a4d34fffeed4dea1 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 4.1E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A1332 e75b891407fc1229a4d34fffeed4dea1 301 SUPERFAMILY SSF46785 3 82 9.53E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A1332 e75b891407fc1229a4d34fffeed4dea1 301 Pfam PF03466 LysR substrate binding domain 97 295 1.4E-24 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_A1332 e75b891407fc1229a4d34fffeed4dea1 301 Gene3D G3DSA:3.40.190.10 88 291 2.4E-46 T 12-10-2018 Vc3S01_A1332 e75b891407fc1229a4d34fffeed4dea1 301 SUPERFAMILY SSF53850 88 294 3.98E-38 T 12-10-2018 Vc3S01_A1253 71e2ea39f2f716ccac8069073fb7c63d 136 Gene3D G3DSA:3.40.630.30 2 136 4.1E-36 T 12-10-2018 Vc3S01_A1253 71e2ea39f2f716ccac8069073fb7c63d 136 SUPERFAMILY SSF55729 10 123 5.48E-24 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_A1253 71e2ea39f2f716ccac8069073fb7c63d 136 Pfam PF13673 Acetyltransferase (GNAT) domain 35 135 6.2E-20 T 12-10-2018 IPR000182 GNAT domain Vc3S01_0292 699591b434c362d7ce9072621666aaeb 124 Pfam PF00164 Ribosomal protein S12/S23 12 123 1.4E-42 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_0292 699591b434c362d7ce9072621666aaeb 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.818 T 12-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_0292 699591b434c362d7ce9072621666aaeb 124 PIRSF PIRSF002133 1 124 3.0E-54 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_0292 699591b434c362d7ce9072621666aaeb 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_0292 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 2.1E-60 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_0292 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 2.1E-60 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_0292 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 2.1E-60 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_0292 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 2.1E-60 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_0292 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 2.1E-60 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_0292 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 2.1E-60 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_0292 699591b434c362d7ce9072621666aaeb 124 Gene3D G3DSA:2.40.50.140 1 124 6.1E-64 T 12-10-2018 Vc3S01_0292 699591b434c362d7ce9072621666aaeb 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 8.5E-71 T 12-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_0292 699591b434c362d7ce9072621666aaeb 124 SUPERFAMILY SSF50249 3 123 2.83E-52 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Vc3S01_A1497 72291672529327478515b0fa38229dde 204 Gene3D G3DSA:3.40.30.10 109 185 4.3E-19 T 12-10-2018 Vc3S01_A1497 72291672529327478515b0fa38229dde 204 ProSitePatterns PS00195 Glutaredoxin active site. 110 126 - T 12-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 Vc3S01_A1497 72291672529327478515b0fa38229dde 204 PRINTS PR00160 Glutaredoxin signature 171 184 2.5E-7 T 12-10-2018 IPR014025 Glutaredoxin subgroup Vc3S01_A1497 72291672529327478515b0fa38229dde 204 PRINTS PR00160 Glutaredoxin signature 108 126 2.5E-7 T 12-10-2018 IPR014025 Glutaredoxin subgroup Vc3S01_A1497 72291672529327478515b0fa38229dde 204 PRINTS PR00160 Glutaredoxin signature 157 170 2.5E-7 T 12-10-2018 IPR014025 Glutaredoxin subgroup Vc3S01_A1497 72291672529327478515b0fa38229dde 204 SUPERFAMILY SSF52833 109 189 7.97E-18 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Vc3S01_A1497 72291672529327478515b0fa38229dde 204 Pfam PF00462 Glutaredoxin 109 174 3.9E-16 T 12-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 Vc3S01_1419 654959791a59771a39a4fd09bb4ab345 401 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 8 377 1.7E-111 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 Vc3S01_1419 654959791a59771a39a4fd09bb4ab345 401 Pfam PF03222 Tryptophan/tyrosine permease family 4 382 2.1E-110 T 12-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 Vc3S01_1419 654959791a59771a39a4fd09bb4ab345 401 PIRSF PIRSF006060 3 292 2.8E-10 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Vc3S01_1419 654959791a59771a39a4fd09bb4ab345 401 PIRSF PIRSF006060 303 400 5.9 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Vc3S01_1419 654959791a59771a39a4fd09bb4ab345 401 PRINTS PR00166 Aromatic amino acid permease signature 222 241 2.2E-79 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 Vc3S01_1419 654959791a59771a39a4fd09bb4ab345 401 PRINTS PR00166 Aromatic amino acid permease signature 313 331 2.2E-79 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 Vc3S01_1419 654959791a59771a39a4fd09bb4ab345 401 PRINTS PR00166 Aromatic amino acid permease signature 334 353 2.2E-79 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 Vc3S01_1419 654959791a59771a39a4fd09bb4ab345 401 PRINTS PR00166 Aromatic amino acid permease signature 38 57 2.2E-79 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 Vc3S01_1419 654959791a59771a39a4fd09bb4ab345 401 PRINTS PR00166 Aromatic amino acid permease signature 183 205 2.2E-79 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 Vc3S01_1419 654959791a59771a39a4fd09bb4ab345 401 PRINTS PR00166 Aromatic amino acid permease signature 149 169 2.2E-79 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 Vc3S01_1419 654959791a59771a39a4fd09bb4ab345 401 PRINTS PR00166 Aromatic amino acid permease signature 11 34 2.2E-79 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 Vc3S01_1419 654959791a59771a39a4fd09bb4ab345 401 PRINTS PR00166 Aromatic amino acid permease signature 279 298 2.2E-79 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 Vc3S01_1419 654959791a59771a39a4fd09bb4ab345 401 PRINTS PR00166 Aromatic amino acid permease signature 83 103 2.2E-79 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 Vc3S01_1419 654959791a59771a39a4fd09bb4ab345 401 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 18 34 - T 12-10-2018 IPR013061 Tryptophan/tryrosine permease, conserved site Vc3S01_1419 654959791a59771a39a4fd09bb4ab345 401 Gene3D G3DSA:1.20.1740.10 3 399 9.7E-11 T 12-10-2018 Vc3S01_3191 6359a8e0857447432ce07eca86100343 277 Pfam PF00990 Diguanylate cyclase, GGDEF domain 136 275 1.3E-24 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_3191 6359a8e0857447432ce07eca86100343 277 SMART SM00267 124 276 1.3E-24 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_3191 6359a8e0857447432ce07eca86100343 277 Gene3D G3DSA:3.30.450.20 6 131 1.2E-9 T 12-10-2018 Vc3S01_3191 6359a8e0857447432ce07eca86100343 277 SUPERFAMILY SSF55073 140 275 1.33E-29 T 12-10-2018 IPR029787 Nucleotide cyclase Vc3S01_3191 6359a8e0857447432ce07eca86100343 277 Gene3D G3DSA:3.30.70.270 132 277 6.8E-36 T 12-10-2018 Vc3S01_3191 6359a8e0857447432ce07eca86100343 277 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 137 275 6.7E-25 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_2730 f4abe01222aceec8bbf86f21a2bfffae 172 SUPERFAMILY SSF52218 1 167 2.35E-49 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Vc3S01_2730 f4abe01222aceec8bbf86f21a2bfffae 172 TIGRFAM TIGR01752 flav_long: flavodoxin 2 168 6.4E-69 T 12-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 Vc3S01_2730 f4abe01222aceec8bbf86f21a2bfffae 172 Pfam PF00258 Flavodoxin 5 160 5.3E-28 T 12-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 Vc3S01_2730 f4abe01222aceec8bbf86f21a2bfffae 172 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 12-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 Vc3S01_2730 f4abe01222aceec8bbf86f21a2bfffae 172 Gene3D G3DSA:3.40.50.360 1 172 5.5E-51 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Vc3S01_2730 f4abe01222aceec8bbf86f21a2bfffae 172 PIRSF PIRSF038996 1 171 3.2E-59 T 12-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 Vc3S01_0512 fb26a18c266cad20e5875b8850205c1e 597 SUPERFAMILY SSF50447 165 288 1.54E-30 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Vc3S01_0512 fb26a18c266cad20e5875b8850205c1e 597 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site Vc3S01_0512 fb26a18c266cad20e5875b8850205c1e 597 Pfam PF00679 Elongation factor G C-terminus 399 482 8.9E-20 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like Vc3S01_0512 fb26a18c266cad20e5875b8850205c1e 597 SUPERFAMILY SSF52540 2 205 1.2E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0512 fb26a18c266cad20e5875b8850205c1e 597 SMART SM00838 398 486 0.0031 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like Vc3S01_0512 fb26a18c266cad20e5875b8850205c1e 597 Pfam PF03144 Elongation factor Tu domain 2 205 275 2.1E-10 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Vc3S01_0512 fb26a18c266cad20e5875b8850205c1e 597 Gene3D G3DSA:3.30.70.2570 479 553 7.2E-33 T 12-10-2018 IPR038363 LepA, C-terminal domain superfamily Vc3S01_0512 fb26a18c266cad20e5875b8850205c1e 597 Pfam PF06421 GTP-binding protein LepA C-terminus 487 592 3.3E-49 T 12-10-2018 IPR013842 GTP-binding protein LepA, C-terminal Vc3S01_0512 fb26a18c266cad20e5875b8850205c1e 597 SUPERFAMILY SSF54980 399 493 1.49E-24 T 12-10-2018 IPR035647 EF-G domain III/V-like Vc3S01_0512 fb26a18c266cad20e5875b8850205c1e 597 TIGRFAM TIGR01393 lepA: elongation factor 4 2 594 1.6E-301 T 12-10-2018 IPR006297 Elongation factor 4 GO:0005525 Vc3S01_0512 fb26a18c266cad20e5875b8850205c1e 597 Gene3D G3DSA:3.30.70.3380 368 478 3.3E-40 T 12-10-2018 Vc3S01_0512 fb26a18c266cad20e5875b8850205c1e 597 Gene3D G3DSA:3.30.70.870 286 367 1.3E-35 T 12-10-2018 Vc3S01_0512 fb26a18c266cad20e5875b8850205c1e 597 Gene3D G3DSA:3.40.50.300 1 185 4.9E-71 T 12-10-2018 Vc3S01_0512 fb26a18c266cad20e5875b8850205c1e 597 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 307.11 T 12-10-2018 IPR006297 Elongation factor 4 GO:0005525 Vc3S01_0512 fb26a18c266cad20e5875b8850205c1e 597 Gene3D G3DSA:2.40.30.10 186 285 6.1E-35 T 12-10-2018 Vc3S01_0512 fb26a18c266cad20e5875b8850205c1e 597 Pfam PF00009 Elongation factor Tu GTP binding domain 2 181 1.1E-52 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Vc3S01_0512 fb26a18c266cad20e5875b8850205c1e 597 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 176 2.8E-17 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Vc3S01_0512 fb26a18c266cad20e5875b8850205c1e 597 SUPERFAMILY SSF54980 292 370 1.8E-18 T 12-10-2018 IPR035647 EF-G domain III/V-like Vc3S01_0512 fb26a18c266cad20e5875b8850205c1e 597 PRINTS PR00315 GTP-binding elongation factor signature 49 57 4.0E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Vc3S01_0512 fb26a18c266cad20e5875b8850205c1e 597 PRINTS PR00315 GTP-binding elongation factor signature 6 19 4.0E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Vc3S01_0512 fb26a18c266cad20e5875b8850205c1e 597 PRINTS PR00315 GTP-binding elongation factor signature 90 101 4.0E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Vc3S01_0512 fb26a18c266cad20e5875b8850205c1e 597 PRINTS PR00315 GTP-binding elongation factor signature 126 135 4.0E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Vc3S01_0512 fb26a18c266cad20e5875b8850205c1e 597 PRINTS PR00315 GTP-binding elongation factor signature 74 84 4.0E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Vc3S01_2949 e7259f03ed3b93daca5134c05bb24c16 443 Gene3D G3DSA:1.10.8.60 335 440 9.1E-40 T 12-10-2018 Vc3S01_2949 e7259f03ed3b93daca5134c05bb24c16 443 Pfam PF07724 AAA domain (Cdc48 subfamily) 171 329 5.8E-43 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Vc3S01_2949 e7259f03ed3b93daca5134c05bb24c16 443 SMART SM00382 49 332 5.6E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_2949 e7259f03ed3b93daca5134c05bb24c16 443 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 335 404 1.5E-4 T 12-10-2018 IPR019489 Clp ATPase, C-terminal Vc3S01_2949 e7259f03ed3b93daca5134c05bb24c16 443 SMART SM01086 335 429 3.3E-20 T 12-10-2018 IPR019489 Clp ATPase, C-terminal Vc3S01_2949 e7259f03ed3b93daca5134c05bb24c16 443 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 443 1.1E-221 T 12-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 Vc3S01_2949 e7259f03ed3b93daca5134c05bb24c16 443 SUPERFAMILY SSF52540 3 441 2.22E-95 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2949 e7259f03ed3b93daca5134c05bb24c16 443 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 104 7.5E-7 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Vc3S01_2949 e7259f03ed3b93daca5134c05bb24c16 443 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 443 43.143 T 12-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 Vc3S01_2342 41da615adff91ae8850dd9bd847ba60d 1315 Pfam PF00975 Thioesterase domain 1067 1301 3.4E-25 T 12-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 Vc3S01_2342 41da615adff91ae8850dd9bd847ba60d 1315 SUPERFAMILY SSF56801 435 991 2.35E-168 T 12-10-2018 Vc3S01_2342 41da615adff91ae8850dd9bd847ba60d 1315 SUPERFAMILY SSF52777 14 171 6.23E-35 T 12-10-2018 Vc3S01_2342 41da615adff91ae8850dd9bd847ba60d 1315 ProSitePatterns PS00455 Putative AMP-binding domain signature. 613 624 - T 12-10-2018 IPR020845 AMP-binding, conserved site Vc3S01_2342 41da615adff91ae8850dd9bd847ba60d 1315 SUPERFAMILY SSF52777 193 457 1.0E-38 T 12-10-2018 Vc3S01_2342 41da615adff91ae8850dd9bd847ba60d 1315 Pfam PF13193 AMP-binding enzyme C-terminal domain 877 953 3.4E-14 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Vc3S01_2342 41da615adff91ae8850dd9bd847ba60d 1315 SMART SM00823 Phosphopantetheine attachment site 978 1047 0.0016 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Vc3S01_2342 41da615adff91ae8850dd9bd847ba60d 1315 Pfam PF00668 Condensation domain 9 429 3.1E-64 T 12-10-2018 IPR001242 Condensation domain Vc3S01_2342 41da615adff91ae8850dd9bd847ba60d 1315 SUPERFAMILY SSF53474 1045 1309 2.27E-51 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_2342 41da615adff91ae8850dd9bd847ba60d 1315 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1002 1017 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site Vc3S01_2342 41da615adff91ae8850dd9bd847ba60d 1315 Pfam PF00501 AMP-binding enzyme 477 869 2.2E-105 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Vc3S01_2342 41da615adff91ae8850dd9bd847ba60d 1315 Pfam PF00550 Phosphopantetheine attachment site 979 1041 4.4E-14 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain Vc3S01_2342 41da615adff91ae8850dd9bd847ba60d 1315 Gene3D G3DSA:3.30.559.30 210 436 7.0E-61 T 12-10-2018 Vc3S01_2342 41da615adff91ae8850dd9bd847ba60d 1315 SUPERFAMILY SSF47336 973 1043 2.09E-18 T 12-10-2018 IPR036736 ACP-like superfamily Vc3S01_2342 41da615adff91ae8850dd9bd847ba60d 1315 Gene3D G3DSA:3.30.559.10 14 209 2.2E-50 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Vc3S01_2342 41da615adff91ae8850dd9bd847ba60d 1315 Gene3D G3DSA:3.40.50.1820 968 1311 2.0E-96 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_2342 41da615adff91ae8850dd9bd847ba60d 1315 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 491 893 1.6E-135 T 12-10-2018 IPR010071 Amino acid adenylation domain Vc3S01_2342 41da615adff91ae8850dd9bd847ba60d 1315 Gene3D G3DSA:3.30.300.30 864 967 4.8E-36 T 12-10-2018 Vc3S01_2342 41da615adff91ae8850dd9bd847ba60d 1315 Gene3D G3DSA:3.40.50.12780 456 863 9.6E-140 T 12-10-2018 Vc3S01_1209 6427387c3b1d9e2197cc9a8c64af2ea9 106 Gene3D G3DSA:3.10.450.140 5 105 1.0E-42 T 12-10-2018 IPR036763 Putative dsDNA mimic superfamily Vc3S01_1209 6427387c3b1d9e2197cc9a8c64af2ea9 106 Pfam PF04269 Protein of unknown function, DUF440 5 105 2.0E-45 T 12-10-2018 IPR007376 dsDNA mimic, putative Vc3S01_1209 6427387c3b1d9e2197cc9a8c64af2ea9 106 Hamap MF_00680 UPF0263 protein YciU [yciU]. 1 106 36.649 T 12-10-2018 IPR007376 dsDNA mimic, putative Vc3S01_1209 6427387c3b1d9e2197cc9a8c64af2ea9 106 SUPERFAMILY SSF102816 3 105 7.59E-50 T 12-10-2018 IPR036763 Putative dsDNA mimic superfamily Vc3S01_1209 6427387c3b1d9e2197cc9a8c64af2ea9 106 PIRSF PIRSF004916 1 105 1.6E-52 T 12-10-2018 IPR007376 dsDNA mimic, putative Vc3S01_1209 6427387c3b1d9e2197cc9a8c64af2ea9 106 ProDom PD020447 UPF0263 YCIU HD0986 VV1228 UNCHARACTERIZED 3D-STRUCTURE VV13059 BCR PM0536 VC1208 8 104 1.0E-49 T 12-10-2018 IPR007376 dsDNA mimic, putative Vc3S01_3038 33cb4d8acdd31164b5b8f6df2a84f962 661 Pfam PF00326 Prolyl oligopeptidase family 450 660 2.3E-50 T 12-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 Vc3S01_3038 33cb4d8acdd31164b5b8f6df2a84f962 661 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 519 539 2.4E-6 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Vc3S01_3038 33cb4d8acdd31164b5b8f6df2a84f962 661 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 461 485 2.4E-6 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Vc3S01_3038 33cb4d8acdd31164b5b8f6df2a84f962 661 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 489 508 2.4E-6 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Vc3S01_3038 33cb4d8acdd31164b5b8f6df2a84f962 661 Gene3D G3DSA:3.40.50.1820 350 661 2.2E-72 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_3038 33cb4d8acdd31164b5b8f6df2a84f962 661 SUPERFAMILY SSF53474 404 660 1.17E-71 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_3038 33cb4d8acdd31164b5b8f6df2a84f962 661 SUPERFAMILY SSF82171 37 405 1.83E-23 T 12-10-2018 Vc3S01_p10081 fd3051bc3dadd876f648ae2e121486b0 252 TIGRFAM TIGR02780 TrbJ_Ti: P-type conjugative transfer protein TrbJ 13 235 1.2E-48 T 12-10-2018 IPR014147 Type IV conjugative transfer protein TrbJ Vc3S01_2224 2b9fd49e8e5884ac5a1f4f40d426d300 485 SUPERFAMILY SSF53756 4 485 1.19E-109 T 12-10-2018 Vc3S01_2224 2b9fd49e8e5884ac5a1f4f40d426d300 485 Hamap MF_00484 Glycogen synthase [glgA]. 6 483 39.506 T 12-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 Vc3S01_2224 2b9fd49e8e5884ac5a1f4f40d426d300 485 Gene3D G3DSA:3.40.50.2000 256 467 5.5E-155 T 12-10-2018 Vc3S01_2224 2b9fd49e8e5884ac5a1f4f40d426d300 485 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 7 482 8.1E-166 T 12-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 Vc3S01_2224 2b9fd49e8e5884ac5a1f4f40d426d300 485 Gene3D G3DSA:3.40.50.2000 8 481 5.5E-155 T 12-10-2018 Vc3S01_2224 2b9fd49e8e5884ac5a1f4f40d426d300 485 Pfam PF08323 Starch synthase catalytic domain 8 239 3.6E-67 T 12-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 Vc3S01_2224 2b9fd49e8e5884ac5a1f4f40d426d300 485 Pfam PF00534 Glycosyl transferases group 1 303 445 2.2E-14 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 Vc3S01_A0748 99dc9213d9e07968dc6a19bc8cd75542 1050 SUPERFAMILY SSF82693 565 674 2.54E-22 T 12-10-2018 Vc3S01_A0748 99dc9213d9e07968dc6a19bc8cd75542 1050 Gene3D G3DSA:3.30.70.1440 672 869 0.0 T 12-10-2018 Vc3S01_A0748 99dc9213d9e07968dc6a19bc8cd75542 1050 SUPERFAMILY SSF82714 184 273 7.32E-23 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Vc3S01_A0748 99dc9213d9e07968dc6a19bc8cd75542 1050 SUPERFAMILY SSF82693 136 332 6.8E-22 T 12-10-2018 Vc3S01_A0748 99dc9213d9e07968dc6a19bc8cd75542 1050 Gene3D G3DSA:3.30.70.1430 567 671 0.0 T 12-10-2018 Vc3S01_A0748 99dc9213d9e07968dc6a19bc8cd75542 1050 Gene3D G3DSA:3.30.2090.10 180 277 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Vc3S01_A0748 99dc9213d9e07968dc6a19bc8cd75542 1050 Gene3D G3DSA:1.20.1640.10 513 1027 0.0 T 12-10-2018 Vc3S01_A0748 99dc9213d9e07968dc6a19bc8cd75542 1050 SUPERFAMILY SSF82714 725 810 1.06E-20 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Vc3S01_A0748 99dc9213d9e07968dc6a19bc8cd75542 1050 Gene3D G3DSA:3.30.70.1430 39 820 0.0 T 12-10-2018 Vc3S01_A0748 99dc9213d9e07968dc6a19bc8cd75542 1050 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 3.9E-89 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_A0748 99dc9213d9e07968dc6a19bc8cd75542 1050 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 3.9E-89 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_A0748 99dc9213d9e07968dc6a19bc8cd75542 1050 PRINTS PR00702 Acriflavin resistance protein family signature 473 496 3.9E-89 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_A0748 99dc9213d9e07968dc6a19bc8cd75542 1050 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 3.9E-89 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_A0748 99dc9213d9e07968dc6a19bc8cd75542 1050 PRINTS PR00702 Acriflavin resistance protein family signature 621 635 3.9E-89 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_A0748 99dc9213d9e07968dc6a19bc8cd75542 1050 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 3.9E-89 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_A0748 99dc9213d9e07968dc6a19bc8cd75542 1050 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 3.9E-89 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_A0748 99dc9213d9e07968dc6a19bc8cd75542 1050 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 3.9E-89 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_A0748 99dc9213d9e07968dc6a19bc8cd75542 1050 PRINTS PR00702 Acriflavin resistance protein family signature 448 471 3.9E-89 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_A0748 99dc9213d9e07968dc6a19bc8cd75542 1050 SUPERFAMILY SSF82866 299 500 1.83E-47 T 12-10-2018 Vc3S01_A0748 99dc9213d9e07968dc6a19bc8cd75542 1050 Gene3D G3DSA:1.20.1640.10 9 512 0.0 T 12-10-2018 Vc3S01_A0748 99dc9213d9e07968dc6a19bc8cd75542 1050 SUPERFAMILY SSF82866 808 1035 5.23E-45 T 12-10-2018 Vc3S01_A0748 99dc9213d9e07968dc6a19bc8cd75542 1050 Gene3D G3DSA:3.30.70.1320 134 334 0.0 T 12-10-2018 Vc3S01_A0748 99dc9213d9e07968dc6a19bc8cd75542 1050 Pfam PF00873 AcrB/AcrD/AcrF family 3 1030 0.0 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_A0748 99dc9213d9e07968dc6a19bc8cd75542 1050 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 2 1033 0.0 T 12-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 Vc3S01_A0748 99dc9213d9e07968dc6a19bc8cd75542 1050 Gene3D G3DSA:3.30.2090.10 724 812 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Vc3S01_A0748 99dc9213d9e07968dc6a19bc8cd75542 1050 SUPERFAMILY SSF82693 39 132 5.75E-26 T 12-10-2018 Vc3S01_A0882 5a7eba5cb7b6286214099dc74ea50906 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 198 8.3E-4 T 12-10-2018 Vc3S01_A0882 5a7eba5cb7b6286214099dc74ea50906 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 4.0E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A0882 5a7eba5cb7b6286214099dc74ea50906 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 4.0E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A0882 5a7eba5cb7b6286214099dc74ea50906 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 4.0E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A0882 5a7eba5cb7b6286214099dc74ea50906 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 250 2.8E-56 T 12-10-2018 Vc3S01_A0882 5a7eba5cb7b6286214099dc74ea50906 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Vc3S01_A0882 5a7eba5cb7b6286214099dc74ea50906 252 Gene3D G3DSA:3.40.50.720 1 252 8.5E-72 T 12-10-2018 Vc3S01_A0882 5a7eba5cb7b6286214099dc74ea50906 252 SUPERFAMILY SSF51735 4 250 1.09E-67 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_A0882 5a7eba5cb7b6286214099dc74ea50906 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 1.7E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A0882 5a7eba5cb7b6286214099dc74ea50906 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 1.7E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A0882 5a7eba5cb7b6286214099dc74ea50906 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 1.7E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A0882 5a7eba5cb7b6286214099dc74ea50906 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.7E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A0882 5a7eba5cb7b6286214099dc74ea50906 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 1.7E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A0882 5a7eba5cb7b6286214099dc74ea50906 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.7E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_0379 1847b1b873e0a6371e1a714a2bc5da8a 645 SUPERFAMILY SSF55073 209 362 8.63E-19 T 12-10-2018 IPR029787 Nucleotide cyclase Vc3S01_0379 1847b1b873e0a6371e1a714a2bc5da8a 645 Pfam PF17157 Gammaproteobacterial periplasmic sensor domain 15 110 8.8E-27 T 12-10-2018 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 Vc3S01_0379 1847b1b873e0a6371e1a714a2bc5da8a 645 Pfam PF00563 EAL domain 382 614 1.4E-48 T 12-10-2018 IPR001633 EAL domain Vc3S01_0379 1847b1b873e0a6371e1a714a2bc5da8a 645 Pfam PF00990 Diguanylate cyclase, GGDEF domain 205 357 1.2E-20 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_0379 1847b1b873e0a6371e1a714a2bc5da8a 645 SUPERFAMILY SSF141868 384 614 7.32E-36 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_0379 1847b1b873e0a6371e1a714a2bc5da8a 645 SMART SM00267 192 362 1.2E-7 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_0379 1847b1b873e0a6371e1a714a2bc5da8a 645 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 202 358 1.8E-10 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_0379 1847b1b873e0a6371e1a714a2bc5da8a 645 Gene3D G3DSA:3.30.70.270 187 363 1.4E-22 T 12-10-2018 Vc3S01_0379 1847b1b873e0a6371e1a714a2bc5da8a 645 SMART SM00052 373 617 1.9E-11 T 12-10-2018 IPR001633 EAL domain Vc3S01_0379 1847b1b873e0a6371e1a714a2bc5da8a 645 Gene3D G3DSA:3.20.20.450 373 616 9.3E-37 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_A1656 93aab93bd3caf00adb5c452d8a3dfe8c 300 Pfam PF04228 Putative neutral zinc metallopeptidase 1 297 9.0E-103 T 12-10-2018 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative Vc3S01_1812 28a4a22d0b83f07e16df3ece7fea6f18 642 SUPERFAMILY SSF49373 119 196 2.71E-5 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments Vc3S01_1812 28a4a22d0b83f07e16df3ece7fea6f18 642 SUPERFAMILY SSF49373 446 494 5.96E-6 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments Vc3S01_1812 28a4a22d0b83f07e16df3ece7fea6f18 642 Pfam PF02368 Bacterial Ig-like domain (group 2) 312 393 3.4E-9 T 12-10-2018 IPR003343 Bacterial Ig-like, group 2 Vc3S01_1812 28a4a22d0b83f07e16df3ece7fea6f18 642 Pfam PF02368 Bacterial Ig-like domain (group 2) 218 295 6.1E-12 T 12-10-2018 IPR003343 Bacterial Ig-like, group 2 Vc3S01_1812 28a4a22d0b83f07e16df3ece7fea6f18 642 Pfam PF02368 Bacterial Ig-like domain (group 2) 120 195 1.7E-8 T 12-10-2018 IPR003343 Bacterial Ig-like, group 2 Vc3S01_1812 28a4a22d0b83f07e16df3ece7fea6f18 642 Pfam PF02368 Bacterial Ig-like domain (group 2) 28 102 4.5E-9 T 12-10-2018 IPR003343 Bacterial Ig-like, group 2 Vc3S01_1812 28a4a22d0b83f07e16df3ece7fea6f18 642 Pfam PF02368 Bacterial Ig-like domain (group 2) 425 488 6.7E-6 T 12-10-2018 IPR003343 Bacterial Ig-like, group 2 Vc3S01_1812 28a4a22d0b83f07e16df3ece7fea6f18 642 SMART SM00635 119 205 0.099 T 12-10-2018 IPR003343 Bacterial Ig-like, group 2 Vc3S01_1812 28a4a22d0b83f07e16df3ece7fea6f18 642 SMART SM00635 311 399 0.0012 T 12-10-2018 IPR003343 Bacterial Ig-like, group 2 Vc3S01_1812 28a4a22d0b83f07e16df3ece7fea6f18 642 SMART SM00635 413 497 0.033 T 12-10-2018 IPR003343 Bacterial Ig-like, group 2 Vc3S01_1812 28a4a22d0b83f07e16df3ece7fea6f18 642 SMART SM00635 26 111 0.0016 T 12-10-2018 IPR003343 Bacterial Ig-like, group 2 Vc3S01_1812 28a4a22d0b83f07e16df3ece7fea6f18 642 SMART SM00635 215 301 5.1E-4 T 12-10-2018 IPR003343 Bacterial Ig-like, group 2 Vc3S01_1812 28a4a22d0b83f07e16df3ece7fea6f18 642 SUPERFAMILY SSF49373 58 113 1.69E-8 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments Vc3S01_1812 28a4a22d0b83f07e16df3ece7fea6f18 642 SUPERFAMILY SSF49373 218 291 1.02E-5 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments Vc3S01_1812 28a4a22d0b83f07e16df3ece7fea6f18 642 SUPERFAMILY SSF49373 313 391 6.83E-7 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments Vc3S01_1812 28a4a22d0b83f07e16df3ece7fea6f18 642 Gene3D G3DSA:2.60.40.1080 216 309 3.1E-19 T 12-10-2018 Vc3S01_1812 28a4a22d0b83f07e16df3ece7fea6f18 642 Gene3D G3DSA:2.60.40.1080 410 510 2.5E-18 T 12-10-2018 Vc3S01_1812 28a4a22d0b83f07e16df3ece7fea6f18 642 Gene3D G3DSA:2.60.40.1080 118 215 8.1E-20 T 12-10-2018 Vc3S01_1812 28a4a22d0b83f07e16df3ece7fea6f18 642 Gene3D G3DSA:2.60.40.1080 25 117 3.2E-14 T 12-10-2018 Vc3S01_1812 28a4a22d0b83f07e16df3ece7fea6f18 642 Gene3D G3DSA:2.60.40.1080 310 409 1.5E-20 T 12-10-2018 Vc3S01_A1520 0bec98908fba419928bc38bff55f6b45 582 PIRSF PIRSF002741 92 320 3.2E-29 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Vc3S01_A1520 0bec98908fba419928bc38bff55f6b45 582 PIRSF PIRSF002741 383 580 0.17 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Vc3S01_A1520 0bec98908fba419928bc38bff55f6b45 582 Gene3D G3DSA:3.40.190.10 122 329 3.4E-31 T 12-10-2018 Vc3S01_A1520 0bec98908fba419928bc38bff55f6b45 582 SUPERFAMILY SSF53850 125 580 1.45E-62 T 12-10-2018 Vc3S01_A1520 0bec98908fba419928bc38bff55f6b45 582 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 164 371 2.2E-24 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain Vc3S01_A1520 0bec98908fba419928bc38bff55f6b45 582 Pfam PF12793 Sugar transport-related sRNA regulator N-term 6 119 5.7E-33 T 12-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain Vc3S01_1860 5ac920a0c265b4fb89970901d4d39853 711 Gene3D G3DSA:3.30.559.30 458 702 2.7E-70 T 12-10-2018 Vc3S01_1860 5ac920a0c265b4fb89970901d4d39853 711 Pfam PF00668 Condensation domain 280 702 2.1E-48 T 12-10-2018 IPR001242 Condensation domain Vc3S01_1860 5ac920a0c265b4fb89970901d4d39853 711 ProSitePatterns PS00012 Phosphopantetheine attachment site. 213 228 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site Vc3S01_1860 5ac920a0c265b4fb89970901d4d39853 711 Gene3D G3DSA:1.10.1200.10 183 260 1.6E-13 T 12-10-2018 IPR036736 ACP-like superfamily Vc3S01_1860 5ac920a0c265b4fb89970901d4d39853 711 Gene3D G3DSA:3.30.559.10 281 651 2.7E-70 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Vc3S01_1860 5ac920a0c265b4fb89970901d4d39853 711 SUPERFAMILY SSF52777 282 454 2.56E-34 T 12-10-2018 Vc3S01_1860 5ac920a0c265b4fb89970901d4d39853 711 SUPERFAMILY SSF47336 187 252 4.19E-12 T 12-10-2018 IPR036736 ACP-like superfamily Vc3S01_1860 5ac920a0c265b4fb89970901d4d39853 711 SUPERFAMILY SSF52777 461 701 1.22E-32 T 12-10-2018 Vc3S01_1860 5ac920a0c265b4fb89970901d4d39853 711 Pfam PF00550 Phosphopantetheine attachment site 199 252 2.4E-11 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain Vc3S01_A0473 46b6b6592653db5ac27c3eae9ac9b530 638 SMART SM00283 376 637 8.2E-85 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Vc3S01_A0473 46b6b6592653db5ac27c3eae9ac9b530 638 Gene3D G3DSA:1.10.287.950 306 638 2.0E-77 T 12-10-2018 Vc3S01_A0473 46b6b6592653db5ac27c3eae9ac9b530 638 SMART SM00304 307 361 7.9E-12 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Vc3S01_A0473 46b6b6592653db5ac27c3eae9ac9b530 638 SUPERFAMILY SSF58104 329 638 3.4E-78 T 12-10-2018 Vc3S01_A0473 46b6b6592653db5ac27c3eae9ac9b530 638 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 421 604 1.6E-42 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Vc3S01_A0473 46b6b6592653db5ac27c3eae9ac9b530 638 Gene3D G3DSA:3.30.450.20 152 283 1.9E-17 T 12-10-2018 Vc3S01_A0473 46b6b6592653db5ac27c3eae9ac9b530 638 Pfam PF00672 HAMP domain 308 357 7.4E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Vc3S01_2097 ef2ea7d47673690e261021bf979ffbc7 285 Pfam PF13391 HNH endonuclease 195 249 1.0E-9 T 12-10-2018 IPR003615 HNH nuclease Vc3S01_2097 ef2ea7d47673690e261021bf979ffbc7 285 SMART SM00466 1 151 3.6E-68 T 12-10-2018 IPR003105 SRA-YDG Vc3S01_2097 ef2ea7d47673690e261021bf979ffbc7 285 SMART SM00507 181 240 1.3E-4 T 12-10-2018 IPR003615 HNH nuclease Vc3S01_2097 ef2ea7d47673690e261021bf979ffbc7 285 Gene3D G3DSA:2.30.280.10 1 172 3.3E-60 T 12-10-2018 IPR036987 SRA-YDG superfamily Vc3S01_2097 ef2ea7d47673690e261021bf979ffbc7 285 SUPERFAMILY SSF88697 3 161 3.73E-57 T 12-10-2018 IPR015947 PUA-like superfamily Vc3S01_2097 ef2ea7d47673690e261021bf979ffbc7 285 Pfam PF02182 SAD/SRA domain 4 149 6.8E-49 T 12-10-2018 IPR003105 SRA-YDG Vc3S01_A0712 6cad644a7e6029a95540cece766c8ed3 417 Pfam PF01554 MatE 241 393 2.2E-17 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Vc3S01_A0712 6cad644a7e6029a95540cece766c8ed3 417 Pfam PF01554 MatE 22 182 1.9E-21 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Vc3S01_A0712 6cad644a7e6029a95540cece766c8ed3 417 TIGRFAM TIGR00797 matE: MATE efflux family protein 22 393 7.9E-44 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Vc3S01_A0712 6cad644a7e6029a95540cece766c8ed3 417 PIRSF PIRSF006603 1 416 1.6E-74 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Vc3S01_A1064 e876347d9a5845f7b0519c94fcf2ef92 483 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 16 281 1.2E-112 T 12-10-2018 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 Vc3S01_A1064 e876347d9a5845f7b0519c94fcf2ef92 483 Gene3D G3DSA:3.10.580.10 306 465 6.6E-22 T 12-10-2018 Vc3S01_A1064 e876347d9a5845f7b0519c94fcf2ef92 483 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 85 94 - T 12-10-2018 IPR024002 Formate/nitrite transporter, conserved site Vc3S01_A1064 e876347d9a5845f7b0519c94fcf2ef92 483 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 29 281 1.7E-75 T 12-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 Vc3S01_A1064 e876347d9a5845f7b0519c94fcf2ef92 483 SMART SM00116 320 368 1.6E-4 T 12-10-2018 IPR000644 CBS domain Vc3S01_A1064 e876347d9a5845f7b0519c94fcf2ef92 483 Gene3D G3DSA:1.20.1080.10 4 270 3.6E-87 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 Vc3S01_A1064 e876347d9a5845f7b0519c94fcf2ef92 483 Pfam PF01226 Formate/nitrite transporter 17 277 1.4E-70 T 12-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 Vc3S01_A1064 e876347d9a5845f7b0519c94fcf2ef92 483 SUPERFAMILY SSF54631 312 464 1.23E-19 T 12-10-2018 Vc3S01_A1064 e876347d9a5845f7b0519c94fcf2ef92 483 Pfam PF00571 CBS domain 313 365 3.4E-9 T 12-10-2018 IPR000644 CBS domain Vc3S01_A1064 e876347d9a5845f7b0519c94fcf2ef92 483 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 170 180 - T 12-10-2018 IPR024002 Formate/nitrite transporter, conserved site Vc3S01_A0939 900d2831077fe454373c4fd79999a050 650 Pfam PF00990 Diguanylate cyclase, GGDEF domain 486 643 2.3E-36 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A0939 900d2831077fe454373c4fd79999a050 650 Gene3D G3DSA:1.25.40.10 128 237 4.3E-13 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_A0939 900d2831077fe454373c4fd79999a050 650 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 481 646 1.1E-41 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A0939 900d2831077fe454373c4fd79999a050 650 Pfam PF13181 Tetratricopeptide repeat 254 281 0.12 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_A0939 900d2831077fe454373c4fd79999a050 650 SUPERFAMILY SSF48452 163 281 1.75E-11 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_A0939 900d2831077fe454373c4fd79999a050 650 SUPERFAMILY SSF48452 248 410 6.07E-13 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_A0939 900d2831077fe454373c4fd79999a050 650 Gene3D G3DSA:3.30.70.270 478 649 3.9E-48 T 12-10-2018 Vc3S01_A0939 900d2831077fe454373c4fd79999a050 650 SMART SM00267 474 647 4.9E-48 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A0939 900d2831077fe454373c4fd79999a050 650 Pfam PF13176 Tetratricopeptide repeat 210 235 5.3E-4 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_A0939 900d2831077fe454373c4fd79999a050 650 SMART SM00028 208 243 13.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_A0939 900d2831077fe454373c4fd79999a050 650 SMART SM00028 252 285 43.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_A0939 900d2831077fe454373c4fd79999a050 650 SMART SM00028 332 365 26.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_A0939 900d2831077fe454373c4fd79999a050 650 SMART SM00028 168 201 390.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_A0939 900d2831077fe454373c4fd79999a050 650 Gene3D G3DSA:1.25.40.10 239 462 1.1E-17 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_A0939 900d2831077fe454373c4fd79999a050 650 SUPERFAMILY SSF55073 490 648 1.18E-38 T 12-10-2018 IPR029787 Nucleotide cyclase Vc3S01_A0087 67486f70694d09e4718b7db80fb3277e 846 Pfam PF08329 Chitinase A, N-terminal domain 21 156 6.4E-54 T 12-10-2018 IPR013540 Chitinase A N-terminal GO:0004568|GO:0006032 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 Vc3S01_A0087 67486f70694d09e4718b7db80fb3277e 846 Pfam PF02839 Carbohydrate binding domain 812 837 2.4E-5 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 Vc3S01_A0087 67486f70694d09e4718b7db80fb3277e 846 Pfam PF02010 REJ domain 613 784 1.8E-5 T 12-10-2018 IPR002859 PKD/REJ-like domain Vc3S01_A0087 67486f70694d09e4718b7db80fb3277e 846 SMART SM00636 159 575 2.3E-159 T 12-10-2018 IPR011583 Chitinase II GO:0008061 Vc3S01_A0087 67486f70694d09e4718b7db80fb3277e 846 SUPERFAMILY SSF51055 793 841 1.8E-14 T 12-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 Vc3S01_A0087 67486f70694d09e4718b7db80fb3277e 846 SUPERFAMILY SSF51445 135 588 1.9E-91 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily Vc3S01_A0087 67486f70694d09e4718b7db80fb3277e 846 SUPERFAMILY SSF54556 461 546 5.19E-17 T 12-10-2018 IPR029070 Chitinase insertion domain superfamily Vc3S01_A0087 67486f70694d09e4718b7db80fb3277e 846 Pfam PF00704 Glycosyl hydrolases family 18 162 575 3.5E-88 T 12-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 Vc3S01_A0087 67486f70694d09e4718b7db80fb3277e 846 Gene3D G3DSA:2.10.10.20 795 838 4.3E-18 T 12-10-2018 Vc3S01_A0087 67486f70694d09e4718b7db80fb3277e 846 SUPERFAMILY SSF81296 21 133 3.22E-31 T 12-10-2018 IPR014756 Immunoglobulin E-set Vc3S01_A0087 67486f70694d09e4718b7db80fb3277e 846 Gene3D G3DSA:3.10.50.10 466 551 9.5E-175 T 12-10-2018 IPR029070 Chitinase insertion domain superfamily Vc3S01_A0087 67486f70694d09e4718b7db80fb3277e 846 ProSitePatterns PS01095 Chitinases family 18 active site. 307 315 - T 12-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 Vc3S01_A0087 67486f70694d09e4718b7db80fb3277e 846 SMART SM00495 795 840 8.3E-15 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 Vc3S01_A0087 67486f70694d09e4718b7db80fb3277e 846 SUPERFAMILY SSF49299 596 689 1.14E-7 T 12-10-2018 IPR035986 PKD domain superfamily Vc3S01_A0087 67486f70694d09e4718b7db80fb3277e 846 Gene3D G3DSA:2.60.40.10 694 785 7.7E-12 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_A0087 67486f70694d09e4718b7db80fb3277e 846 Gene3D G3DSA:2.60.40.10 22 132 3.0E-45 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_A0087 67486f70694d09e4718b7db80fb3277e 846 SMART SM00089 600 690 0.093 T 12-10-2018 IPR022409 PKD/Chitinase domain Vc3S01_A0087 67486f70694d09e4718b7db80fb3277e 846 SMART SM00089 701 787 1.6 T 12-10-2018 IPR022409 PKD/Chitinase domain Vc3S01_A0087 67486f70694d09e4718b7db80fb3277e 846 SMART SM00089 55 134 1.2 T 12-10-2018 IPR022409 PKD/Chitinase domain Vc3S01_A0087 67486f70694d09e4718b7db80fb3277e 846 Gene3D G3DSA:2.60.40.10 597 692 1.2E-22 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_A0087 67486f70694d09e4718b7db80fb3277e 846 Gene3D G3DSA:3.20.20.80 162 577 9.5E-175 T 12-10-2018 Vc3S01_3153 acc84bb1d1d14796b1c0946d37c12e22 131 PRINTS PR00607 Class IE cytochrome C signature 63 74 6.9E-15 T 12-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 Vc3S01_3153 acc84bb1d1d14796b1c0946d37c12e22 131 PRINTS PR00607 Class IE cytochrome C signature 74 84 6.9E-15 T 12-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 Vc3S01_3153 acc84bb1d1d14796b1c0946d37c12e22 131 PRINTS PR00607 Class IE cytochrome C signature 102 114 6.9E-15 T 12-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 Vc3S01_3153 acc84bb1d1d14796b1c0946d37c12e22 131 PRINTS PR00607 Class IE cytochrome C signature 117 128 6.9E-15 T 12-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 Vc3S01_3153 acc84bb1d1d14796b1c0946d37c12e22 131 Gene3D G3DSA:1.10.760.10 53 130 1.3E-33 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Vc3S01_3153 acc84bb1d1d14796b1c0946d37c12e22 131 SUPERFAMILY SSF46626 54 128 2.8E-18 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Vc3S01_3153 acc84bb1d1d14796b1c0946d37c12e22 131 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 53 127 1.6E-15 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_0589 6ec976fafef94fdfa4d7a9fc3809d987 122 ProDom PD020773 UPF0231 YACL UNCHARACTERISED UCP006287 VC0605 UNCHARACTERIZED 3'REGION VV2750 BCR OXIDASE 1 120 9.0E-60 T 12-10-2018 IPR008249 Uncharacterised protein family UPF0231 Vc3S01_0589 6ec976fafef94fdfa4d7a9fc3809d987 122 Pfam PF06062 Uncharacterised protein family (UPF0231) 1 120 1.2E-42 T 12-10-2018 IPR008249 Uncharacterised protein family UPF0231 Vc3S01_0589 6ec976fafef94fdfa4d7a9fc3809d987 122 PIRSF PIRSF006287 1 122 2.3E-49 T 12-10-2018 IPR008249 Uncharacterised protein family UPF0231 Vc3S01_0589 6ec976fafef94fdfa4d7a9fc3809d987 122 Hamap MF_01053 UPF0231 protein YacL [yacL]. 1 122 30.952 T 12-10-2018 IPR008249 Uncharacterised protein family UPF0231 Vc3S01_A1275 817133f490b7a794024e8a74fc15cccf 638 Gene3D G3DSA:3.30.70.270 472 636 3.8E-50 T 12-10-2018 Vc3S01_A1275 817133f490b7a794024e8a74fc15cccf 638 SMART SM00304 180 233 0.0013 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Vc3S01_A1275 817133f490b7a794024e8a74fc15cccf 638 Gene3D G3DSA:1.20.1480.50 141 240 2.6E-5 T 12-10-2018 Vc3S01_A1275 817133f490b7a794024e8a74fc15cccf 638 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 474 630 3.8E-34 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A1275 817133f490b7a794024e8a74fc15cccf 638 Gene3D G3DSA:3.30.450.20 355 468 2.2E-8 T 12-10-2018 Vc3S01_A1275 817133f490b7a794024e8a74fc15cccf 638 Pfam PF00990 Diguanylate cyclase, GGDEF domain 478 629 8.3E-41 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A1275 817133f490b7a794024e8a74fc15cccf 638 SUPERFAMILY SSF55073 483 631 5.02E-40 T 12-10-2018 IPR029787 Nucleotide cyclase Vc3S01_A1275 817133f490b7a794024e8a74fc15cccf 638 SMART SM00267 467 633 4.3E-49 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A1275 817133f490b7a794024e8a74fc15cccf 638 Pfam PF17152 Periplasmic sensor domain 45 110 5.7E-10 T 12-10-2018 IPR033417 Periplasmic sensor domain CHASE8 Vc3S01_A1275 817133f490b7a794024e8a74fc15cccf 638 SUPERFAMILY SSF55785 351 466 6.07E-8 T 12-10-2018 IPR035965 PAS domain superfamily Vc3S01_0535 d648b4fc021b2d2217175dbc6f55d6d6 347 ProSitePatterns PS00321 recA signature. 213 221 - T 12-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 Vc3S01_0535 d648b4fc021b2d2217175dbc6f55d6d6 347 SMART SM00382 57 228 4.8E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_0535 d648b4fc021b2d2217175dbc6f55d6d6 347 PRINTS PR00142 RecA protein signature 297 314 9.5E-85 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Vc3S01_0535 d648b4fc021b2d2217175dbc6f55d6d6 347 PRINTS PR00142 RecA protein signature 93 122 9.5E-85 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Vc3S01_0535 d648b4fc021b2d2217175dbc6f55d6d6 347 PRINTS PR00142 RecA protein signature 243 272 9.5E-85 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Vc3S01_0535 d648b4fc021b2d2217175dbc6f55d6d6 347 PRINTS PR00142 RecA protein signature 210 238 9.5E-85 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Vc3S01_0535 d648b4fc021b2d2217175dbc6f55d6d6 347 PRINTS PR00142 RecA protein signature 127 156 9.5E-85 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Vc3S01_0535 d648b4fc021b2d2217175dbc6f55d6d6 347 PRINTS PR00142 RecA protein signature 165 194 9.5E-85 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Vc3S01_0535 d648b4fc021b2d2217175dbc6f55d6d6 347 Pfam PF00154 recA bacterial DNA recombination protein 7 267 1.0E-142 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Vc3S01_0535 d648b4fc021b2d2217175dbc6f55d6d6 347 Gene3D G3DSA:3.30.250.10 268 326 4.0E-25 T 12-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal Vc3S01_0535 d648b4fc021b2d2217175dbc6f55d6d6 347 Gene3D G3DSA:3.40.50.300 26 267 1.4E-82 T 12-10-2018 Vc3S01_0535 d648b4fc021b2d2217175dbc6f55d6d6 347 SUPERFAMILY SSF54752 269 325 1.1E-20 T 12-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal Vc3S01_0535 d648b4fc021b2d2217175dbc6f55d6d6 347 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 324 1.4E-169 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Vc3S01_0535 d648b4fc021b2d2217175dbc6f55d6d6 347 SUPERFAMILY SSF52540 4 266 4.02E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0535 d648b4fc021b2d2217175dbc6f55d6d6 347 Hamap MF_00268 Protein RecA [recA]. 5 329 50.49 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Vc3S01_A1570 5ebf5f72cabfb7e1472d3192839d2fee 377 Pfam PF13437 HlyD family secretion protein 173 287 3.6E-7 T 12-10-2018 Vc3S01_A1570 5ebf5f72cabfb7e1472d3192839d2fee 377 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 46 371 3.6E-82 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Vc3S01_A1570 5ebf5f72cabfb7e1472d3192839d2fee 377 Gene3D G3DSA:1.10.287.470 96 169 1.9E-95 T 12-10-2018 Vc3S01_A1570 5ebf5f72cabfb7e1472d3192839d2fee 377 Gene3D G3DSA:2.40.30.170 49 300 1.9E-95 T 12-10-2018 Vc3S01_A1570 5ebf5f72cabfb7e1472d3192839d2fee 377 Gene3D G3DSA:2.40.50.100 61 205 1.9E-95 T 12-10-2018 Vc3S01_A1570 5ebf5f72cabfb7e1472d3192839d2fee 377 Pfam PF13533 Biotin-lipoyl like 63 110 6.5E-15 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain Vc3S01_A1570 5ebf5f72cabfb7e1472d3192839d2fee 377 Gene3D G3DSA:2.40.420.20 302 370 1.9E-95 T 12-10-2018 Vc3S01_A1570 5ebf5f72cabfb7e1472d3192839d2fee 377 SUPERFAMILY SSF111369 50 294 2.35E-60 T 12-10-2018 Vc3S01_1894 c20e7e8b6ef8eb59cf5f2743ad01a6cf 416 SUPERFAMILY SSF51556 72 370 7.09E-83 T 12-10-2018 IPR032466 Metal-dependent hydrolase Vc3S01_1894 c20e7e8b6ef8eb59cf5f2743ad01a6cf 416 Gene3D G3DSA:3.20.20.140 73 371 2.9E-157 T 12-10-2018 Vc3S01_1894 c20e7e8b6ef8eb59cf5f2743ad01a6cf 416 TIGRFAM TIGR01224 hutI: imidazolonepropionase 28 409 1.1E-148 T 12-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Vc3S01_1894 c20e7e8b6ef8eb59cf5f2743ad01a6cf 416 SUPERFAMILY SSF51338 1 412 7.26E-23 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Vc3S01_1894 c20e7e8b6ef8eb59cf5f2743ad01a6cf 416 Pfam PF01979 Amidohydrolase family 70 408 3.8E-16 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Vc3S01_1894 c20e7e8b6ef8eb59cf5f2743ad01a6cf 416 Gene3D G3DSA:2.30.40.10 7 408 2.9E-157 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Vc3S01_1894 c20e7e8b6ef8eb59cf5f2743ad01a6cf 416 Hamap MF_00372 Imidazolonepropionase [hutI]. 2 411 41.153 T 12-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Vc3S01_2787 f0fe96efce4209394c620eabbeeb4f5a 603 Gene3D G3DSA:1.25.40.10 23 146 6.3E-11 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_2787 f0fe96efce4209394c620eabbeeb4f5a 603 Hamap MF_01890 Penicillin-binding protein activator LpoA [lpoA]. 1 603 29.86 T 12-10-2018 IPR007443 Penicillin-binding protein activator LpoA Vc3S01_2787 f0fe96efce4209394c620eabbeeb4f5a 603 Gene3D G3DSA:3.40.50.2300 261 596 6.5E-63 T 12-10-2018 Vc3S01_2787 f0fe96efce4209394c620eabbeeb4f5a 603 Pfam PF04348 LppC putative lipoprotein 40 599 1.2E-165 T 12-10-2018 IPR007443 Penicillin-binding protein activator LpoA Vc3S01_2787 f0fe96efce4209394c620eabbeeb4f5a 603 SUPERFAMILY SSF53822 260 599 2.73E-71 T 12-10-2018 IPR028082 Periplasmic binding protein-like I Vc3S01_2787 f0fe96efce4209394c620eabbeeb4f5a 603 Gene3D G3DSA:1.25.40.650 149 254 5.3E-18 T 12-10-2018 Vc3S01_2787 f0fe96efce4209394c620eabbeeb4f5a 603 Gene3D G3DSA:3.40.50.2300 369 597 6.5E-63 T 12-10-2018 Vc3S01_0946 a4a034901dc033e43a702b38d3f2d31b 280 Gene3D G3DSA:3.40.50.150 1 273 6.8E-80 T 12-10-2018 Vc3S01_0946 a4a034901dc033e43a702b38d3f2d31b 280 PIRSF PIRSF018249 1 273 5.7E-85 T 12-10-2018 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 Vc3S01_0946 a4a034901dc033e43a702b38d3f2d31b 280 Pfam PF13847 Methyltransferase domain 87 202 3.6E-14 T 12-10-2018 IPR025714 Methyltransferase domain Vc3S01_0946 a4a034901dc033e43a702b38d3f2d31b 280 SUPERFAMILY SSF53335 4 255 2.39E-46 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Vc3S01_0375 90e1bc7cba14dde8e5cfc36e3a646cbc 940 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_0375 90e1bc7cba14dde8e5cfc36e3a646cbc 940 Pfam PF00005 ABC transporter 622 859 6.6E-10 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_0375 90e1bc7cba14dde8e5cfc36e3a646cbc 940 ProSitePatterns PS00211 ABC transporters family signature. 829 843 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_0375 90e1bc7cba14dde8e5cfc36e3a646cbc 940 Gene3D G3DSA:3.40.50.300 6 593 1.5E-245 T 12-10-2018 Vc3S01_0375 90e1bc7cba14dde8e5cfc36e3a646cbc 940 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 939 22.964 T 12-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 Vc3S01_0375 90e1bc7cba14dde8e5cfc36e3a646cbc 940 Gene3D G3DSA:3.40.50.300 616 935 1.2E-140 T 12-10-2018 Vc3S01_0375 90e1bc7cba14dde8e5cfc36e3a646cbc 940 SUPERFAMILY SSF52540 4 568 1.84E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0375 90e1bc7cba14dde8e5cfc36e3a646cbc 940 Gene3D G3DSA:3.30.190.20 130 243 1.5E-245 T 12-10-2018 Vc3S01_0375 90e1bc7cba14dde8e5cfc36e3a646cbc 940 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 3 923 0.0 T 12-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 Vc3S01_0375 90e1bc7cba14dde8e5cfc36e3a646cbc 940 Gene3D G3DSA:1.20.1580.10 90 491 1.5E-245 T 12-10-2018 Vc3S01_0375 90e1bc7cba14dde8e5cfc36e3a646cbc 940 Gene3D G3DSA:1.10.8.280 286 402 1.5E-245 T 12-10-2018 Vc3S01_0375 90e1bc7cba14dde8e5cfc36e3a646cbc 940 SUPERFAMILY SSF52540 620 912 5.97E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0375 90e1bc7cba14dde8e5cfc36e3a646cbc 940 Gene3D G3DSA:1.20.1580.10 691 829 1.2E-140 T 12-10-2018 Vc3S01_1118 34cdf3b9c58ff2f106ddf72ff7480fb3 1024 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 270 694 3.5E-148 T 12-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Vc3S01_1118 34cdf3b9c58ff2f106ddf72ff7480fb3 1024 SMART SM00481 4 73 3.5E-7 T 12-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal Vc3S01_1118 34cdf3b9c58ff2f106ddf72ff7480fb3 1024 Pfam PF02811 PHP domain 8 99 2.0E-8 T 12-10-2018 IPR004013 PHP domain GO:0003824 Vc3S01_1118 34cdf3b9c58ff2f106ddf72ff7480fb3 1024 Pfam PF14579 Helix-hairpin-helix motif 768 855 8.6E-14 T 12-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Vc3S01_1118 34cdf3b9c58ff2f106ddf72ff7480fb3 1024 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 4 969 3.6E-155 T 12-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Vc3S01_1118 34cdf3b9c58ff2f106ddf72ff7480fb3 1024 Pfam PF01336 OB-fold nucleic acid binding domain 934 997 4.2E-9 T 12-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 Vc3S01_1118 34cdf3b9c58ff2f106ddf72ff7480fb3 1024 Gene3D G3DSA:3.20.20.140 1 247 4.3E-35 T 12-10-2018 Vc3S01_1118 34cdf3b9c58ff2f106ddf72ff7480fb3 1024 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 3 1024 13.168 T 12-10-2018 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Vc3S01_0519 748e249c0eb2de328608593274d42def 932 SUPERFAMILY SSF52172 533 643 4.54E-8 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_0519 748e249c0eb2de328608593274d42def 932 Gene3D G3DSA:1.20.120.160 818 932 5.3E-32 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 Vc3S01_0519 748e249c0eb2de328608593274d42def 932 Pfam PF01627 Hpt domain 840 919 5.3E-12 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Vc3S01_0519 748e249c0eb2de328608593274d42def 932 Pfam PF00512 His Kinase A (phospho-acceptor) domain 291 355 3.5E-20 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_0519 748e249c0eb2de328608593274d42def 932 SMART SM00387 402 518 1.6E-37 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_0519 748e249c0eb2de328608593274d42def 932 SUPERFAMILY SSF52172 667 784 4.13E-36 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_0519 748e249c0eb2de328608593274d42def 932 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 31 175 9.7E-53 T 12-10-2018 IPR019247 Histidine kinase BarA, N-terminal Vc3S01_0519 748e249c0eb2de328608593274d42def 932 Pfam PF00072 Response regulator receiver domain 670 780 1.2E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_0519 748e249c0eb2de328608593274d42def 932 SMART SM00388 290 355 2.9E-24 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_0519 748e249c0eb2de328608593274d42def 932 SUPERFAMILY SSF47384 275 356 9.61E-23 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Vc3S01_0519 748e249c0eb2de328608593274d42def 932 SMART SM00304 198 250 3.1E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Vc3S01_0519 748e249c0eb2de328608593274d42def 932 SUPERFAMILY SSF158472 200 247 1.06E-6 T 12-10-2018 Vc3S01_0519 748e249c0eb2de328608593274d42def 932 SUPERFAMILY SSF47226 764 919 3.01E-23 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 Vc3S01_0519 748e249c0eb2de328608593274d42def 932 Gene3D G3DSA:3.40.50.2300 669 797 2.5E-39 T 12-10-2018 Vc3S01_0519 748e249c0eb2de328608593274d42def 932 Gene3D G3DSA:3.30.565.10 357 521 9.8E-51 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_0519 748e249c0eb2de328608593274d42def 932 SUPERFAMILY SSF55874 344 516 3.14E-43 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_0519 748e249c0eb2de328608593274d42def 932 Gene3D G3DSA:1.10.287.130 276 356 6.6E-27 T 12-10-2018 Vc3S01_0519 748e249c0eb2de328608593274d42def 932 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 402 516 1.3E-29 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_0519 748e249c0eb2de328608593274d42def 932 Gene3D G3DSA:1.20.1480.50 161 270 1.4E-7 T 12-10-2018 Vc3S01_0519 748e249c0eb2de328608593274d42def 932 PRINTS PR00344 Bacterial sensor protein C-terminal signature 461 471 4.2E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_0519 748e249c0eb2de328608593274d42def 932 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 457 4.2E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_0519 748e249c0eb2de328608593274d42def 932 PRINTS PR00344 Bacterial sensor protein C-terminal signature 478 496 4.2E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_0519 748e249c0eb2de328608593274d42def 932 PRINTS PR00344 Bacterial sensor protein C-terminal signature 502 515 4.2E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_0519 748e249c0eb2de328608593274d42def 932 SMART SM00073 829 927 2.0E-9 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Vc3S01_0519 748e249c0eb2de328608593274d42def 932 SMART SM00448 668 781 2.0E-36 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A1354 f62544ffc94e75c1cc2c3f2a43f4dfef 641 SUPERFAMILY SSF56935 40 641 1.18E-96 T 12-10-2018 Vc3S01_A1354 f62544ffc94e75c1cc2c3f2a43f4dfef 641 Gene3D G3DSA:2.170.130.10 40 145 1.0E-38 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Vc3S01_A1354 f62544ffc94e75c1cc2c3f2a43f4dfef 641 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 624 641 - T 12-10-2018 IPR010917 TonB-dependent receptor, conserved site Vc3S01_A1354 f62544ffc94e75c1cc2c3f2a43f4dfef 641 Gene3D G3DSA:2.40.170.20 147 641 1.3E-131 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Vc3S01_A1354 f62544ffc94e75c1cc2c3f2a43f4dfef 641 Pfam PF00593 TonB dependent receptor 229 639 1.8E-49 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Vc3S01_A1354 f62544ffc94e75c1cc2c3f2a43f4dfef 641 Pfam PF07715 TonB-dependent Receptor Plug Domain 45 140 3.9E-14 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain Vc3S01_A0005 23d2bc3def60e1b5e271b498a7194ce6 310 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_A0005 23d2bc3def60e1b5e271b498a7194ce6 310 Gene3D G3DSA:3.40.50.300 3 306 4.1E-79 T 12-10-2018 Vc3S01_A0005 23d2bc3def60e1b5e271b498a7194ce6 310 Pfam PF00005 ABC transporter 30 184 7.4E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_A0005 23d2bc3def60e1b5e271b498a7194ce6 310 SUPERFAMILY SSF52540 5 254 2.59E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A0005 23d2bc3def60e1b5e271b498a7194ce6 310 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 263 2.1E-8 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Vc3S01_A0005 23d2bc3def60e1b5e271b498a7194ce6 310 SMART SM00382 39 233 7.6E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_3107 0ea543dca54a72668a7b65274d0916a6 397 Pfam PF03486 HI0933-like protein 5 395 7.1E-158 T 12-10-2018 Vc3S01_3107 0ea543dca54a72668a7b65274d0916a6 397 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 365 372 1.0E-8 T 12-10-2018 Vc3S01_3107 0ea543dca54a72668a7b65274d0916a6 397 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 158 167 1.0E-8 T 12-10-2018 Vc3S01_3107 0ea543dca54a72668a7b65274d0916a6 397 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.0E-8 T 12-10-2018 Vc3S01_3107 0ea543dca54a72668a7b65274d0916a6 397 SUPERFAMILY SSF51905 1 397 1.63E-59 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_3107 0ea543dca54a72668a7b65274d0916a6 397 Gene3D G3DSA:2.40.30.10 191 342 1.3E-131 T 12-10-2018 Vc3S01_3107 0ea543dca54a72668a7b65274d0916a6 397 Gene3D G3DSA:1.10.8.260 265 325 1.3E-131 T 12-10-2018 IPR023166 HI0933-like insert domain superfamily Vc3S01_3107 0ea543dca54a72668a7b65274d0916a6 397 SUPERFAMILY SSF160996 193 341 2.49E-42 T 12-10-2018 Vc3S01_3107 0ea543dca54a72668a7b65274d0916a6 397 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 7 395 1.4E-130 T 12-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like Vc3S01_3107 0ea543dca54a72668a7b65274d0916a6 397 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 155 173 2.2E-5 T 12-10-2018 Vc3S01_3107 0ea543dca54a72668a7b65274d0916a6 397 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 350 372 2.2E-5 T 12-10-2018 Vc3S01_3107 0ea543dca54a72668a7b65274d0916a6 397 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 2.2E-5 T 12-10-2018 Vc3S01_3107 0ea543dca54a72668a7b65274d0916a6 397 Gene3D G3DSA:3.50.50.60 8 391 1.3E-131 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_1993 93e919a07a13bf03926df9473a17b44d 385 Gene3D G3DSA:3.40.190.10 157 301 1.6E-16 T 12-10-2018 Vc3S01_1993 93e919a07a13bf03926df9473a17b44d 385 PIRSF PIRSF029172 1 385 2.2E-174 T 12-10-2018 IPR027020 Protein ynjB Vc3S01_1993 93e919a07a13bf03926df9473a17b44d 385 SUPERFAMILY SSF53850 37 383 1.3E-40 T 12-10-2018 Vc3S01_1993 93e919a07a13bf03926df9473a17b44d 385 Pfam PF13416 Bacterial extracellular solute-binding protein 60 345 3.2E-21 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein Vc3S01_1993 93e919a07a13bf03926df9473a17b44d 385 Gene3D G3DSA:3.40.190.10 73 334 1.6E-16 T 12-10-2018 Vc3S01_0377 a0718970b4aaf57db16e4f3f289a6fd7 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 154 208 2.1E-18 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_0377 a0718970b4aaf57db16e4f3f289a6fd7 214 Gene3D G3DSA:1.10.10.10 144 214 1.3E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_0377 a0718970b4aaf57db16e4f3f289a6fd7 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 5.0E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_0377 a0718970b4aaf57db16e4f3f289a6fd7 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 5.0E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_0377 a0718970b4aaf57db16e4f3f289a6fd7 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 5.0E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_0377 a0718970b4aaf57db16e4f3f289a6fd7 214 SMART SM00421 151 208 1.5E-20 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_0377 a0718970b4aaf57db16e4f3f289a6fd7 214 Gene3D G3DSA:3.40.50.2300 23 142 2.6E-25 T 12-10-2018 Vc3S01_0377 a0718970b4aaf57db16e4f3f289a6fd7 214 SUPERFAMILY SSF46894 140 210 1.56E-18 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Vc3S01_A0439 94c3a8ffc29548a02a6bef757b3c9e71 128 Pfam PF11742 Protein of unknown function (DUF3302) 3 78 1.4E-40 T 12-10-2018 IPR011223 Uncharacterised conserved protein UCP028770 Vc3S01_A0439 94c3a8ffc29548a02a6bef757b3c9e71 128 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 78 127 0.002 T 12-10-2018 Vc3S01_A0439 94c3a8ffc29548a02a6bef757b3c9e71 128 PIRSF PIRSF028770 1 127 4.6E-70 T 12-10-2018 IPR011223 Uncharacterised conserved protein UCP028770 Vc3S01_0560 b28f3ea88c67c703d740b0e4dd0ae1b7 204 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 179 4.4E-68 T 12-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 Vc3S01_0560 b28f3ea88c67c703d740b0e4dd0ae1b7 204 Pfam PF01121 Dephospho-CoA kinase 4 179 2.7E-73 T 12-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 Vc3S01_0560 b28f3ea88c67c703d740b0e4dd0ae1b7 204 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 197 28.094 T 12-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 Vc3S01_0560 b28f3ea88c67c703d740b0e4dd0ae1b7 204 Gene3D G3DSA:3.40.50.300 1 204 4.1E-70 T 12-10-2018 Vc3S01_0560 b28f3ea88c67c703d740b0e4dd0ae1b7 204 SUPERFAMILY SSF52540 1 193 1.31E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_p10080 4a7580a4d0d142e35262ee51d660733a 315 Pfam PF00437 Type II/IV secretion system protein 20 284 1.2E-76 T 12-10-2018 IPR001482 Type II/IV secretion system protein Vc3S01_p10080 4a7580a4d0d142e35262ee51d660733a 315 Gene3D G3DSA:3.30.450.90 11 112 4.1E-18 T 12-10-2018 Vc3S01_p10080 4a7580a4d0d142e35262ee51d660733a 315 Gene3D G3DSA:3.40.50.300 113 314 8.4E-57 T 12-10-2018 Vc3S01_p10080 4a7580a4d0d142e35262ee51d660733a 315 SUPERFAMILY SSF52540 16 283 5.55E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_p10080 4a7580a4d0d142e35262ee51d660733a 315 TIGRFAM TIGR02782 TrbB_P: P-type conjugative transfer ATPase TrbB 10 306 1.8E-132 T 12-10-2018 IPR014149 Conjugative transfer, TrbB GO:0000746|GO:0005737 Vc3S01_1304 61d5fec3a3652fd4ec97eb3ef0480f8f 143 Pfam PF13673 Acetyltransferase (GNAT) domain 53 126 4.8E-17 T 12-10-2018 IPR000182 GNAT domain Vc3S01_1304 61d5fec3a3652fd4ec97eb3ef0480f8f 143 Gene3D G3DSA:3.40.630.30 3 143 1.5E-31 T 12-10-2018 Vc3S01_1304 61d5fec3a3652fd4ec97eb3ef0480f8f 143 SUPERFAMILY SSF55729 2 142 1.74E-22 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_2668 acfde0132b5cca9543e1e86fdfd5705c 501 SUPERFAMILY SSF53067 12 131 3.18E-36 T 12-10-2018 Vc3S01_2668 acfde0132b5cca9543e1e86fdfd5705c 501 Gene3D G3DSA:1.10.3210.10 310 501 2.3E-59 T 12-10-2018 Vc3S01_2668 acfde0132b5cca9543e1e86fdfd5705c 501 PIRSF PIRSF001267 2 501 1.9E-201 T 12-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 Vc3S01_2668 acfde0132b5cca9543e1e86fdfd5705c 501 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 11 305 4.6E-101 T 12-10-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 Vc3S01_2668 acfde0132b5cca9543e1e86fdfd5705c 501 Gene3D G3DSA:3.30.420.150 116 294 2.3E-90 T 12-10-2018 Vc3S01_2668 acfde0132b5cca9543e1e86fdfd5705c 501 Pfam PF02541 Ppx/GppA phosphatase family 25 307 4.9E-86 T 12-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 Vc3S01_2668 acfde0132b5cca9543e1e86fdfd5705c 501 Gene3D G3DSA:3.30.420.40 13 302 2.3E-90 T 12-10-2018 Vc3S01_2668 acfde0132b5cca9543e1e86fdfd5705c 501 SUPERFAMILY SSF53067 136 308 8.21E-47 T 12-10-2018 Vc3S01_2668 acfde0132b5cca9543e1e86fdfd5705c 501 SUPERFAMILY SSF109604 312 500 1.0E-48 T 12-10-2018 Vc3S01_3076 48b514f0ed704344349f8ef6c1f36e34 348 SMART SM00388 129 194 3.0E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_3076 48b514f0ed704344349f8ef6c1f36e34 348 Pfam PF00989 PAS fold 7 110 2.8E-15 T 12-10-2018 IPR013767 PAS fold GO:0006355 Vc3S01_3076 48b514f0ed704344349f8ef6c1f36e34 348 Gene3D G3DSA:3.30.450.20 1 112 4.0E-28 T 12-10-2018 Vc3S01_3076 48b514f0ed704344349f8ef6c1f36e34 348 Gene3D G3DSA:3.30.565.10 192 348 2.1E-44 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_3076 48b514f0ed704344349f8ef6c1f36e34 348 SMART SM00387 233 348 8.6E-31 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_3076 48b514f0ed704344349f8ef6c1f36e34 348 SUPERFAMILY SSF47384 125 190 2.16E-12 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Vc3S01_3076 48b514f0ed704344349f8ef6c1f36e34 348 Gene3D G3DSA:1.10.287.130 114 191 1.3E-13 T 12-10-2018 Vc3S01_3076 48b514f0ed704344349f8ef6c1f36e34 348 SMART SM00091 4 72 2.2E-6 T 12-10-2018 IPR000014 PAS domain Vc3S01_3076 48b514f0ed704344349f8ef6c1f36e34 348 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 8 121 3.6E-6 T 12-10-2018 IPR000014 PAS domain Vc3S01_3076 48b514f0ed704344349f8ef6c1f36e34 348 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 234 347 1.0E-19 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_3076 48b514f0ed704344349f8ef6c1f36e34 348 SUPERFAMILY SSF55785 7 97 4.19E-8 T 12-10-2018 IPR035965 PAS domain superfamily Vc3S01_3076 48b514f0ed704344349f8ef6c1f36e34 348 Pfam PF00512 His Kinase A (phospho-acceptor) domain 133 189 2.9E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_3076 48b514f0ed704344349f8ef6c1f36e34 348 SUPERFAMILY SSF55874 198 347 1.02E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_3076 48b514f0ed704344349f8ef6c1f36e34 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 282 296 1.7E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_3076 48b514f0ed704344349f8ef6c1f36e34 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 334 347 1.7E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_3076 48b514f0ed704344349f8ef6c1f36e34 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 311 329 1.7E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_A1315 7c77635be999d0917e360fce71a1e0c6 681 SMART SM00448 563 677 1.9E-31 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A1315 7c77635be999d0917e360fce71a1e0c6 681 SUPERFAMILY SSF47384 171 221 1.92E-5 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Vc3S01_A1315 7c77635be999d0917e360fce71a1e0c6 681 Gene3D G3DSA:3.40.50.2300 558 681 3.5E-35 T 12-10-2018 Vc3S01_A1315 7c77635be999d0917e360fce71a1e0c6 681 SUPERFAMILY SSF52172 561 681 6.12E-35 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_A1315 7c77635be999d0917e360fce71a1e0c6 681 Gene3D G3DSA:1.10.287.130 168 258 4.5E-6 T 12-10-2018 Vc3S01_A1315 7c77635be999d0917e360fce71a1e0c6 681 SMART SM00387 305 413 4.7E-22 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_A1315 7c77635be999d0917e360fce71a1e0c6 681 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 391 7.5E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_A1315 7c77635be999d0917e360fce71a1e0c6 681 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 410 7.5E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_A1315 7c77635be999d0917e360fce71a1e0c6 681 PRINTS PR00344 Bacterial sensor protein C-terminal signature 343 357 7.5E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_A1315 7c77635be999d0917e360fce71a1e0c6 681 PRINTS PR00344 Bacterial sensor protein C-terminal signature 361 371 7.5E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_A1315 7c77635be999d0917e360fce71a1e0c6 681 Gene3D G3DSA:3.30.565.10 259 411 4.0E-29 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_A1315 7c77635be999d0917e360fce71a1e0c6 681 SUPERFAMILY SSF55874 250 412 3.67E-31 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_A1315 7c77635be999d0917e360fce71a1e0c6 681 Pfam PF00072 Response regulator receiver domain 565 677 3.1E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A1315 7c77635be999d0917e360fce71a1e0c6 681 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 308 410 1.7E-17 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_A0391 4c2b7989aad6ebc16999b2b81f7429be 672 SUPERFAMILY SSF55718 545 668 4.41E-30 T 12-10-2018 IPR036527 SCP2 sterol-binding domain superfamily Vc3S01_A0391 4c2b7989aad6ebc16999b2b81f7429be 672 Gene3D G3DSA:3.30.1050.10 537 670 1.0E-31 T 12-10-2018 IPR036527 SCP2 sterol-binding domain superfamily Vc3S01_A0391 4c2b7989aad6ebc16999b2b81f7429be 672 ProSitePatterns PS00743 Beta-lactamases class B signature 1. 176 195 - T 12-10-2018 IPR001018 Beta-lactamase, class-B, conserved site GO:0008270|GO:0008800|GO:0017001 Vc3S01_A0391 4c2b7989aad6ebc16999b2b81f7429be 672 Pfam PF14864 Alkyl sulfatase C-terminal 545 667 3.9E-27 T 12-10-2018 IPR029229 Alkyl sulfatase, C-terminal Vc3S01_A0391 4c2b7989aad6ebc16999b2b81f7429be 672 SUPERFAMILY SSF56281 30 537 2.61E-107 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Vc3S01_A0391 4c2b7989aad6ebc16999b2b81f7429be 672 SMART SM00849 128 355 2.1E-15 T 12-10-2018 IPR001279 Metallo-beta-lactamase Vc3S01_A0391 4c2b7989aad6ebc16999b2b81f7429be 672 Pfam PF00753 Metallo-beta-lactamase superfamily 124 339 1.2E-15 T 12-10-2018 IPR001279 Metallo-beta-lactamase Vc3S01_A0391 4c2b7989aad6ebc16999b2b81f7429be 672 Pfam PF14863 Alkyl sulfatase dimerisation 397 536 2.4E-37 T 12-10-2018 IPR029228 Alkyl sulfatase dimerisation domain GO:0046983 Vc3S01_A0391 4c2b7989aad6ebc16999b2b81f7429be 672 Gene3D G3DSA:1.25.40.880 396 536 3.8E-36 T 12-10-2018 IPR038536 Alkyl/aryl-sulfatase, dimerisation domain superfamily Vc3S01_A0391 4c2b7989aad6ebc16999b2b81f7429be 672 Gene3D G3DSA:3.60.15.30 30 395 2.0E-117 T 12-10-2018 Vc3S01_A0326 d12635763b351aa0b0ef283aff706c07 457 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 2 456 1.0E-121 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Vc3S01_A0326 d12635763b351aa0b0ef283aff706c07 457 Pfam PF00460 Flagella basal body rod protein 5 33 1.6E-8 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Vc3S01_A0326 d12635763b351aa0b0ef283aff706c07 457 SUPERFAMILY SSF64518 137 457 1.96E-29 T 12-10-2018 Vc3S01_A0326 d12635763b351aa0b0ef283aff706c07 457 PRINTS PR01005 Flagellar hook-associated protein signature 10 33 2.8E-8 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Vc3S01_A0326 d12635763b351aa0b0ef283aff706c07 457 PRINTS PR01005 Flagellar hook-associated protein signature 122 142 2.8E-8 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Vc3S01_A0326 d12635763b351aa0b0ef283aff706c07 457 PRINTS PR01005 Flagellar hook-associated protein signature 213 231 2.8E-8 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Vc3S01_A0326 d12635763b351aa0b0ef283aff706c07 457 PRINTS PR01005 Flagellar hook-associated protein signature 155 179 2.8E-8 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Vc3S01_A0326 d12635763b351aa0b0ef283aff706c07 457 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 408 456 4.0E-7 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Vc3S01_2162 a5b4b55840bb70060bd2f603b42243f5 220 SUPERFAMILY SSF140591 100 201 1.57E-8 T 12-10-2018 Vc3S01_2162 a5b4b55840bb70060bd2f603b42243f5 220 Pfam PF09025 YopR, type III needle-polymerisation regulator 92 220 9.0E-41 T 12-10-2018 IPR013349 Type III secretion system effector YopR GO:0009405|GO:0030254|GO:0030257 Vc3S01_2162 a5b4b55840bb70060bd2f603b42243f5 220 TIGRFAM TIGR02509 type_III_yopR: type III secretion effector, YopR family 98 219 1.8E-35 T 12-10-2018 IPR013349 Type III secretion system effector YopR GO:0009405|GO:0030254|GO:0030257 Vc3S01_2488 5c3ce04750545f7221d0c738f2014fe0 373 SUPERFAMILY SSF56935 44 373 1.74E-40 T 12-10-2018 Vc3S01_2488 5c3ce04750545f7221d0c738f2014fe0 373 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 177 188 1.4E-5 T 12-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 Vc3S01_2488 5c3ce04750545f7221d0c738f2014fe0 373 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 117 127 1.4E-5 T 12-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 Vc3S01_2488 5c3ce04750545f7221d0c738f2014fe0 373 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 365 373 1.4E-5 T 12-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 Vc3S01_2488 5c3ce04750545f7221d0c738f2014fe0 373 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 278 290 1.4E-5 T 12-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 Vc3S01_2488 5c3ce04750545f7221d0c738f2014fe0 373 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 73 84 1.4E-5 T 12-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 Vc3S01_2488 5c3ce04750545f7221d0c738f2014fe0 373 Pfam PF13609 Gram-negative porin 10 342 1.1E-35 T 12-10-2018 Vc3S01_2488 5c3ce04750545f7221d0c738f2014fe0 373 Gene3D G3DSA:2.40.160.10 44 373 1.5E-43 T 12-10-2018 IPR023614 Porin domain superfamily Vc3S01_A0224 73312044122d1faa29f1b4ebee76ee59 244 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_A0224 73312044122d1faa29f1b4ebee76ee59 244 Gene3D G3DSA:3.40.50.300 2 243 2.9E-54 T 12-10-2018 Vc3S01_A0224 73312044122d1faa29f1b4ebee76ee59 244 Pfam PF00005 ABC transporter 21 166 5.4E-25 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_A0224 73312044122d1faa29f1b4ebee76ee59 244 SMART SM00382 30 214 7.6E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_A0224 73312044122d1faa29f1b4ebee76ee59 244 SUPERFAMILY SSF52540 5 227 1.09E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_3046 d95c3d63d7a0ed5a3628ea8d7e8523a7 260 Pfam PF00561 alpha/beta hydrolase fold 22 247 2.6E-25 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Vc3S01_3046 d95c3d63d7a0ed5a3628ea8d7e8523a7 260 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 17 258 2.5E-103 T 12-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 Vc3S01_3046 d95c3d63d7a0ed5a3628ea8d7e8523a7 260 Gene3D G3DSA:3.40.50.1820 6 259 9.2E-65 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_3046 d95c3d63d7a0ed5a3628ea8d7e8523a7 260 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 11 260 45.503 T 12-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 Vc3S01_3046 d95c3d63d7a0ed5a3628ea8d7e8523a7 260 SUPERFAMILY SSF53474 9 258 4.75E-48 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_A0272 0c770a7f2d26af9f729c28fe0d955225 184 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 135 163 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 Vc3S01_A0272 0c770a7f2d26af9f729c28fe0d955225 184 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 127 160 1.3E-7 T 12-10-2018 IPR001451 Hexapeptide repeat Vc3S01_A0272 0c770a7f2d26af9f729c28fe0d955225 184 Pfam PF12464 Maltose acetyltransferase 6 55 9.9E-10 T 12-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 Vc3S01_A0272 0c770a7f2d26af9f729c28fe0d955225 184 SMART SM01266 4 56 5.1E-13 T 12-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 Vc3S01_A0272 0c770a7f2d26af9f729c28fe0d955225 184 SUPERFAMILY SSF51161 56 183 3.33E-41 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily Vc3S01_A0272 0c770a7f2d26af9f729c28fe0d955225 184 Gene3D G3DSA:2.160.10.10 1 184 1.0E-62 T 12-10-2018 Vc3S01_2435 5e70022eeec60c751905d1a5df066c9a 275 SUPERFAMILY SSF51735 2 270 1.46E-55 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_2435 5e70022eeec60c751905d1a5df066c9a 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 3.7E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_2435 5e70022eeec60c751905d1a5df066c9a 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 3.7E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_2435 5e70022eeec60c751905d1a5df066c9a 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 3.7E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_2435 5e70022eeec60c751905d1a5df066c9a 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 3.7E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_2435 5e70022eeec60c751905d1a5df066c9a 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.7E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_2435 5e70022eeec60c751905d1a5df066c9a 275 Pfam PF00106 short chain dehydrogenase 3 187 1.5E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_2435 5e70022eeec60c751905d1a5df066c9a 275 Gene3D G3DSA:3.40.50.720 2 264 2.3E-59 T 12-10-2018 Vc3S01_2435 5e70022eeec60c751905d1a5df066c9a 275 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Vc3S01_A0855 e13268d476046f547fea5981936eb44b 802 Gene3D G3DSA:3.40.50.300 33 111 1.1E-8 T 12-10-2018 Vc3S01_A0855 e13268d476046f547fea5981936eb44b 802 SUPERFAMILY SSF52540 41 329 2.46E-27 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A0855 e13268d476046f547fea5981936eb44b 802 Gene3D G3DSA:3.40.50.300 176 341 6.8E-11 T 12-10-2018 Vc3S01_A0855 e13268d476046f547fea5981936eb44b 802 Pfam PF00350 Dynamin family 64 288 3.0E-17 T 12-10-2018 IPR022812 Dynamin superfamily Vc3S01_1174 88131613a1a693d40b0d58920306b5ee 698 SMART SM00304 366 420 2.2E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Vc3S01_1174 88131613a1a693d40b0d58920306b5ee 698 SMART SM00283 435 696 3.9E-60 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Vc3S01_1174 88131613a1a693d40b0d58920306b5ee 698 Gene3D G3DSA:3.30.450.20 66 323 6.8E-24 T 12-10-2018 Vc3S01_1174 88131613a1a693d40b0d58920306b5ee 698 Gene3D G3DSA:1.10.287.950 366 698 1.9E-65 T 12-10-2018 Vc3S01_1174 88131613a1a693d40b0d58920306b5ee 698 SUPERFAMILY SSF58104 388 697 2.75E-71 T 12-10-2018 Vc3S01_1174 88131613a1a693d40b0d58920306b5ee 698 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 456 485 5.4E-22 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Vc3S01_1174 88131613a1a693d40b0d58920306b5ee 698 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 562 591 5.4E-22 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Vc3S01_1174 88131613a1a693d40b0d58920306b5ee 698 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 533 560 5.4E-22 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Vc3S01_1174 88131613a1a693d40b0d58920306b5ee 698 Gene3D G3DSA:3.30.450.20 72 226 6.8E-24 T 12-10-2018 Vc3S01_1174 88131613a1a693d40b0d58920306b5ee 698 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 503 661 8.0E-41 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Vc3S01_1401 e468292aa6eea8dbd2db28ea81484da4 65 SUPERFAMILY SSF48452 4 38 5.06E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_1401 e468292aa6eea8dbd2db28ea81484da4 65 Gene3D G3DSA:1.25.40.10 1 62 4.8E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_1063 d87948c1d345f8b672005f37ecd57a83 721 Pfam PF01515 Phosphate acetyl/butaryl transferase 391 706 4.1E-125 T 12-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 Vc3S01_1063 d87948c1d345f8b672005f37ecd57a83 721 Gene3D G3DSA:3.40.50.300 5 217 2.5E-13 T 12-10-2018 Vc3S01_1063 d87948c1d345f8b672005f37ecd57a83 721 Gene3D G3DSA:3.40.1390.20 225 365 1.3E-13 T 12-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily Vc3S01_1063 d87948c1d345f8b672005f37ecd57a83 721 SUPERFAMILY SSF53659 392 709 1.64E-95 T 12-10-2018 Vc3S01_1063 d87948c1d345f8b672005f37ecd57a83 721 Pfam PF07085 DRTGG domain 233 344 1.8E-27 T 12-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 Vc3S01_1063 d87948c1d345f8b672005f37ecd57a83 721 Pfam PF13500 AAA domain 3 229 3.2E-50 T 12-10-2018 Vc3S01_1063 d87948c1d345f8b672005f37ecd57a83 721 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 406 706 6.8E-132 T 12-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 Vc3S01_1063 d87948c1d345f8b672005f37ecd57a83 721 SUPERFAMILY SSF52540 1 240 1.33E-28 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_1063 d87948c1d345f8b672005f37ecd57a83 721 Gene3D G3DSA:3.40.50.10950 398 709 8.4E-134 T 12-10-2018 Vc3S01_1063 d87948c1d345f8b672005f37ecd57a83 721 SUPERFAMILY SSF75138 229 353 1.96E-24 T 12-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily Vc3S01_1063 d87948c1d345f8b672005f37ecd57a83 721 Gene3D G3DSA:3.40.50.10750 529 682 8.4E-134 T 12-10-2018 Vc3S01_1063 d87948c1d345f8b672005f37ecd57a83 721 PIRSF PIRSF006107 1 714 0.0 T 12-10-2018 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 Vc3S01_A1690 fb44482c36f21feef3f713846f8b877f 238 SMART SM00862 21 100 4.5E-9 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Vc3S01_A1690 fb44482c36f21feef3f713846f8b877f 238 Gene3D G3DSA:1.10.10.10 5 119 5.0E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A1690 fb44482c36f21feef3f713846f8b877f 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 23 100 1.9E-12 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Vc3S01_A1690 fb44482c36f21feef3f713846f8b877f 238 SUPERFAMILY SSF46894 7 101 1.73E-14 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Vc3S01_1624 49375e19d2bbff8bd218d7011580c3f2 277 Gene3D G3DSA:1.10.10.10 215 277 5.4E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_1624 49375e19d2bbff8bd218d7011580c3f2 277 PIRSF PIRSF012524 1 277 1.5E-96 T 12-10-2018 IPR014464 Conserved virulence factor B Vc3S01_1624 49375e19d2bbff8bd218d7011580c3f2 277 Pfam PF13509 S1 domain 4 63 3.3E-22 T 12-10-2018 IPR039566 Conserved virulence factor B, S1 domain Vc3S01_1624 49375e19d2bbff8bd218d7011580c3f2 277 Pfam PF13509 S1 domain 71 132 5.9E-5 T 12-10-2018 IPR039566 Conserved virulence factor B, S1 domain Vc3S01_2777 5ae35e86a4a031fc7c323ade33d4c6ad 355 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 184 332 5.1E-35 T 12-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 Vc3S01_2777 5ae35e86a4a031fc7c323ade33d4c6ad 355 SUPERFAMILY SSF53756 5 352 3.73E-127 T 12-10-2018 Vc3S01_2777 5ae35e86a4a031fc7c323ade33d4c6ad 355 Gene3D G3DSA:3.40.50.2000 8 160 1.1E-122 T 12-10-2018 Vc3S01_2777 5ae35e86a4a031fc7c323ade33d4c6ad 355 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 8 144 4.9E-47 T 12-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Vc3S01_2777 5ae35e86a4a031fc7c323ade33d4c6ad 355 Gene3D G3DSA:3.40.50.2000 161 318 1.1E-122 T 12-10-2018 Vc3S01_2777 5ae35e86a4a031fc7c323ade33d4c6ad 355 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 7 352 34.757 T 12-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Vc3S01_2777 5ae35e86a4a031fc7c323ade33d4c6ad 355 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 348 2.5E-118 T 12-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Vc3S01_A0900 23c8c5d1c39e91e37eaa7e4a0dfe5572 203 SUPERFAMILY SSF50475 27 151 5.43E-16 T 12-10-2018 Vc3S01_A0900 23c8c5d1c39e91e37eaa7e4a0dfe5572 203 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 30 122 1.1E-13 T 12-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Vc3S01_A0900 23c8c5d1c39e91e37eaa7e4a0dfe5572 203 Gene3D G3DSA:2.30.110.10 19 147 2.5E-23 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Vc3S01_A0900 23c8c5d1c39e91e37eaa7e4a0dfe5572 203 TIGRFAM TIGR04025 PPOX_FMN_DR2398: pyridoxamine 5'-phosphate oxidase, FMN-binding family 8 203 3.3E-73 T 12-10-2018 IPR024029 Pyridoxamine 5-phosphate oxidase, FMN-dependent Vc3S01_0640 44a7f6c8ff62ede4bd923de21410ce67 679 SUPERFAMILY SSF55785 5 115 7.33E-10 T 12-10-2018 IPR035965 PAS domain superfamily Vc3S01_0640 44a7f6c8ff62ede4bd923de21410ce67 679 Gene3D G3DSA:3.30.70.270 248 416 6.4E-50 T 12-10-2018 Vc3S01_0640 44a7f6c8ff62ede4bd923de21410ce67 679 SUPERFAMILY SSF55785 118 204 2.09E-8 T 12-10-2018 IPR035965 PAS domain superfamily Vc3S01_0640 44a7f6c8ff62ede4bd923de21410ce67 679 SMART SM00052 420 666 3.6E-104 T 12-10-2018 IPR001633 EAL domain Vc3S01_0640 44a7f6c8ff62ede4bd923de21410ce67 679 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 8 120 5.1E-8 T 12-10-2018 IPR000014 PAS domain Vc3S01_0640 44a7f6c8ff62ede4bd923de21410ce67 679 Gene3D G3DSA:3.20.20.450 421 676 2.4E-94 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_0640 44a7f6c8ff62ede4bd923de21410ce67 679 Gene3D G3DSA:3.30.450.20 129 239 1.9E-7 T 12-10-2018 Vc3S01_0640 44a7f6c8ff62ede4bd923de21410ce67 679 Pfam PF00990 Diguanylate cyclase, GGDEF domain 253 406 4.6E-43 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_0640 44a7f6c8ff62ede4bd923de21410ce67 679 Gene3D G3DSA:3.30.450.20 3 128 5.8E-12 T 12-10-2018 Vc3S01_0640 44a7f6c8ff62ede4bd923de21410ce67 679 SUPERFAMILY SSF55073 258 412 9.42E-46 T 12-10-2018 IPR029787 Nucleotide cyclase Vc3S01_0640 44a7f6c8ff62ede4bd923de21410ce67 679 Pfam PF13188 PAS domain 133 177 5.6E-5 T 12-10-2018 IPR000014 PAS domain Vc3S01_0640 44a7f6c8ff62ede4bd923de21410ce67 679 SMART SM00091 8 74 0.0026 T 12-10-2018 IPR000014 PAS domain Vc3S01_0640 44a7f6c8ff62ede4bd923de21410ce67 679 SMART SM00091 131 198 0.011 T 12-10-2018 IPR000014 PAS domain Vc3S01_0640 44a7f6c8ff62ede4bd923de21410ce67 679 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 252 407 1.9E-37 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_0640 44a7f6c8ff62ede4bd923de21410ce67 679 Pfam PF08448 PAS fold 15 119 1.8E-7 T 12-10-2018 IPR013656 PAS fold-4 Vc3S01_0640 44a7f6c8ff62ede4bd923de21410ce67 679 SMART SM00267 242 410 5.9E-55 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_0640 44a7f6c8ff62ede4bd923de21410ce67 679 SUPERFAMILY SSF141868 427 674 4.18E-84 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_0640 44a7f6c8ff62ede4bd923de21410ce67 679 Pfam PF00563 EAL domain 427 661 2.8E-72 T 12-10-2018 IPR001633 EAL domain Vc3S01_2193 281779b150894298f471331c855346bf 378 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 361 8.7E-109 T 12-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 Vc3S01_2193 281779b150894298f471331c855346bf 378 PIRSF PIRSF000267 2 377 2.5E-124 T 12-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 Vc3S01_2193 281779b150894298f471331c855346bf 378 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 378 1.3E-172 T 12-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 Vc3S01_1047 cba2d4ccc75e1838b3530d16329e76e7 676 SUPERFAMILY SSF46600 625 672 1.7E-10 T 12-10-2018 IPR036876 UVR domain superfamily Vc3S01_1047 cba2d4ccc75e1838b3530d16329e76e7 676 SUPERFAMILY SSF52540 5 416 6.28E-137 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_1047 cba2d4ccc75e1838b3530d16329e76e7 676 Pfam PF00271 Helicase conserved C-terminal domain 440 545 2.2E-17 T 12-10-2018 IPR001650 Helicase, C-terminal Vc3S01_1047 cba2d4ccc75e1838b3530d16329e76e7 676 SMART SM00487 9 427 8.0E-29 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Vc3S01_1047 cba2d4ccc75e1838b3530d16329e76e7 676 Pfam PF04851 Type III restriction enzyme, res subunit 13 129 9.1E-9 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Vc3S01_1047 cba2d4ccc75e1838b3530d16329e76e7 676 Gene3D G3DSA:3.40.50.300 1 233 1.2E-72 T 12-10-2018 Vc3S01_1047 cba2d4ccc75e1838b3530d16329e76e7 676 Gene3D G3DSA:3.40.50.300 416 597 1.7E-50 T 12-10-2018 Vc3S01_1047 cba2d4ccc75e1838b3530d16329e76e7 676 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 5 669 0.0 T 12-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 Vc3S01_1047 cba2d4ccc75e1838b3530d16329e76e7 676 Gene3D G3DSA:3.40.50.300 270 415 4.6E-50 T 12-10-2018 Vc3S01_1047 cba2d4ccc75e1838b3530d16329e76e7 676 Pfam PF02151 UvrB/uvrC motif 636 671 5.9E-8 T 12-10-2018 IPR001943 UVR domain GO:0005515 Vc3S01_1047 cba2d4ccc75e1838b3530d16329e76e7 676 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 671 42.691 T 12-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 Vc3S01_1047 cba2d4ccc75e1838b3530d16329e76e7 676 SUPERFAMILY SSF52540 37 582 7.82E-36 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_1047 cba2d4ccc75e1838b3530d16329e76e7 676 SMART SM00490 461 547 1.2E-19 T 12-10-2018 IPR001650 Helicase, C-terminal Vc3S01_1047 cba2d4ccc75e1838b3530d16329e76e7 676 Pfam PF12344 Ultra-violet resistance protein B 553 595 8.0E-20 T 12-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain Vc3S01_1047 cba2d4ccc75e1838b3530d16329e76e7 676 Gene3D G3DSA:4.10.860.10 618 676 2.7E-19 T 12-10-2018 Vc3S01_2661 7c4ce0e5b0355eece5087f9c004bf2b7 212 SUPERFAMILY SSF54523 113 211 1.1E-10 T 12-10-2018 Vc3S01_2661 7c4ce0e5b0355eece5087f9c004bf2b7 212 Gene3D G3DSA:3.30.1300.30 104 211 2.0E-14 T 12-10-2018 Vc3S01_2661 7c4ce0e5b0355eece5087f9c004bf2b7 212 Pfam PF03895 YadA-like membrane anchor domain 152 211 9.7E-8 T 12-10-2018 IPR005594 YadA-like, C-terminal Vc3S01_3109 a3291680adcd63a98716377615809340 175 Pfam PF00210 Ferritin-like domain 8 143 4.1E-39 T 12-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 Vc3S01_3109 a3291680adcd63a98716377615809340 175 Gene3D G3DSA:1.20.1260.10 1 175 8.5E-53 T 12-10-2018 IPR012347 Ferritin-like Vc3S01_3109 a3291680adcd63a98716377615809340 175 SUPERFAMILY SSF47240 1 160 9.68E-58 T 12-10-2018 IPR009078 Ferritin-like superfamily Vc3S01_0132 5013e6b5d289a217042c63ae6fbdeffe 206 Hamap MF_00015 LexA repressor [lexA]. 3 203 31.818 T 12-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 Vc3S01_0132 5013e6b5d289a217042c63ae6fbdeffe 206 Pfam PF00717 Peptidase S24-like 118 183 1.5E-15 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C Vc3S01_0132 5013e6b5d289a217042c63ae6fbdeffe 206 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 115 125 1.5E-13 T 12-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 Vc3S01_0132 5013e6b5d289a217042c63ae6fbdeffe 206 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 154 166 1.5E-13 T 12-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 Vc3S01_0132 5013e6b5d289a217042c63ae6fbdeffe 206 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 126 137 1.5E-13 T 12-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 Vc3S01_0132 5013e6b5d289a217042c63ae6fbdeffe 206 Gene3D G3DSA:1.10.10.10 1 69 1.0E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_0132 5013e6b5d289a217042c63ae6fbdeffe 206 Gene3D G3DSA:2.10.109.10 84 206 3.6E-44 T 12-10-2018 Vc3S01_0132 5013e6b5d289a217042c63ae6fbdeffe 206 SUPERFAMILY SSF51306 80 202 1.57E-36 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Vc3S01_0132 5013e6b5d289a217042c63ae6fbdeffe 206 SUPERFAMILY SSF46785 3 69 2.33E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_0132 5013e6b5d289a217042c63ae6fbdeffe 206 TIGRFAM TIGR00498 lexA: repressor LexA 1 203 6.4E-81 T 12-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 Vc3S01_0132 5013e6b5d289a217042c63ae6fbdeffe 206 Pfam PF01726 LexA DNA binding domain 1 65 3.7E-29 T 12-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 Vc3S01_A0266 5ec3661714434f758d65cc2fcf40d227 337 SMART SM00267 167 337 7.1E-47 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A0266 5ec3661714434f758d65cc2fcf40d227 337 SUPERFAMILY SSF55073 183 335 7.53E-43 T 12-10-2018 IPR029787 Nucleotide cyclase Vc3S01_A0266 5ec3661714434f758d65cc2fcf40d227 337 Pfam PF00990 Diguanylate cyclase, GGDEF domain 178 333 3.4E-40 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A0266 5ec3661714434f758d65cc2fcf40d227 337 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 175 334 5.6E-42 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A0266 5ec3661714434f758d65cc2fcf40d227 337 Gene3D G3DSA:3.30.70.270 164 336 4.9E-49 T 12-10-2018 Vc3S01_0553 99a73aec9d3a5370a2ca8efb3a875904 82 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 2.2E-27 T 12-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_0553 99a73aec9d3a5370a2ca8efb3a875904 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 23.095 T 12-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_0553 99a73aec9d3a5370a2ca8efb3a875904 82 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 12-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_0553 99a73aec9d3a5370a2ca8efb3a875904 82 Pfam PF00886 Ribosomal protein S16 8 68 1.6E-23 T 12-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_0553 99a73aec9d3a5370a2ca8efb3a875904 82 Gene3D G3DSA:3.30.1320.10 1 82 2.7E-31 T 12-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_0553 99a73aec9d3a5370a2ca8efb3a875904 82 SUPERFAMILY SSF54565 1 76 6.93E-28 T 12-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_A0198 29f5da58461f11a32325d851dbb48b9a 447 SUPERFAMILY SSF111283 8 445 1.44E-93 T 12-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 Vc3S01_A0198 29f5da58461f11a32325d851dbb48b9a 447 Pfam PF01523 Putative modulator of DNA gyrase 24 312 5.8E-44 T 12-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 Vc3S01_A0198 29f5da58461f11a32325d851dbb48b9a 447 Gene3D G3DSA:3.30.2290.10 3 212 3.2E-33 T 12-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal Vc3S01_1526 de924b031c50f0bbe45d6e184ae73169 607 Pfam PF01261 Xylose isomerase-like TIM barrel 20 218 2.0E-34 T 12-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain Vc3S01_1526 de924b031c50f0bbe45d6e184ae73169 607 Gene3D G3DSA:3.10.180.10 422 606 3.6E-30 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Vc3S01_1526 de924b031c50f0bbe45d6e184ae73169 607 Gene3D G3DSA:3.20.20.150 1 270 5.9E-67 T 12-10-2018 Vc3S01_1526 de924b031c50f0bbe45d6e184ae73169 607 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 279 411 1.8E-24 T 12-10-2018 Vc3S01_1526 de924b031c50f0bbe45d6e184ae73169 607 SUPERFAMILY SSF51658 1 269 3.54E-73 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily Vc3S01_1526 de924b031c50f0bbe45d6e184ae73169 607 Gene3D G3DSA:3.10.180.10 271 420 1.2E-28 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Vc3S01_1526 de924b031c50f0bbe45d6e184ae73169 607 SUPERFAMILY SSF54593 276 605 5.99E-42 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Vc3S01_0679 be2dc09b4b6da4505901586da5346234 484 Gene3D G3DSA:3.30.450.380 38 228 2.7E-45 T 12-10-2018 Vc3S01_0679 be2dc09b4b6da4505901586da5346234 484 SUPERFAMILY SSF52540 113 450 8.55E-67 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0679 be2dc09b4b6da4505901586da5346234 484 Pfam PF00437 Type II/IV secretion system protein 133 410 5.5E-84 T 12-10-2018 IPR001482 Type II/IV secretion system protein Vc3S01_0679 be2dc09b4b6da4505901586da5346234 484 Gene3D G3DSA:3.40.50.300 229 455 4.8E-70 T 12-10-2018 Vc3S01_2866 162c9842bb4b0c1494cd7aad01ed48dd 269 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 10 263 1.1E-88 T 12-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 Vc3S01_2866 162c9842bb4b0c1494cd7aad01ed48dd 269 Pfam PF00398 Ribosomal RNA adenine dimethylase 9 264 7.5E-77 T 12-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm Vc3S01_2866 162c9842bb4b0c1494cd7aad01ed48dd 269 Gene3D G3DSA:1.10.8.100 200 267 2.5E-25 T 12-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 Vc3S01_2866 162c9842bb4b0c1494cd7aad01ed48dd 269 SMART SM00650 25 197 3.3E-89 T 12-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 Vc3S01_2866 162c9842bb4b0c1494cd7aad01ed48dd 269 Gene3D G3DSA:3.40.50.150 1 198 2.2E-65 T 12-10-2018 Vc3S01_2866 162c9842bb4b0c1494cd7aad01ed48dd 269 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 41 68 - T 12-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 Vc3S01_2866 162c9842bb4b0c1494cd7aad01ed48dd 269 SUPERFAMILY SSF53335 8 267 1.49E-79 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Vc3S01_2866 162c9842bb4b0c1494cd7aad01ed48dd 269 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 9 264 55.549 T 12-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 Vc3S01_0954 6c3c1dda312a5de2b3e2842f37d825ff 337 SUPERFAMILY SSF53774 3 336 2.09E-114 T 12-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 Vc3S01_0954 6c3c1dda312a5de2b3e2842f37d825ff 337 Gene3D G3DSA:3.40.50.40 210 337 6.1E-45 T 12-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 Vc3S01_0954 6c3c1dda312a5de2b3e2842f37d825ff 337 PRINTS PR00139 Asparaginase/glutaminase family signature 261 279 8.4E-17 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 Vc3S01_0954 6c3c1dda312a5de2b3e2842f37d825ff 337 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 8.4E-17 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 Vc3S01_0954 6c3c1dda312a5de2b3e2842f37d825ff 337 PRINTS PR00139 Asparaginase/glutaminase family signature 83 101 8.4E-17 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 Vc3S01_0954 6c3c1dda312a5de2b3e2842f37d825ff 337 Gene3D G3DSA:3.40.50.1170 1 209 9.8E-94 T 12-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 Vc3S01_0954 6c3c1dda312a5de2b3e2842f37d825ff 337 Pfam PF00710 Asparaginase, N-terminal 5 192 8.6E-68 T 12-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 Vc3S01_0954 6c3c1dda312a5de2b3e2842f37d825ff 337 PIRSF PIRSF500176 2 333 2.8E-110 T 12-10-2018 Vc3S01_0954 6c3c1dda312a5de2b3e2842f37d825ff 337 SMART SM00870 5 324 1.3E-141 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 Vc3S01_0954 6c3c1dda312a5de2b3e2842f37d825ff 337 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 12-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 Vc3S01_0954 6c3c1dda312a5de2b3e2842f37d825ff 337 PIRSF PIRSF001220 1 335 3.3E-95 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 Vc3S01_0954 6c3c1dda312a5de2b3e2842f37d825ff 337 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 4 336 6.1E-117 T 12-10-2018 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 Reactome: R-HSA-70614 Vc3S01_0954 6c3c1dda312a5de2b3e2842f37d825ff 337 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 84 94 - T 12-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 Vc3S01_0588 c07f688e3befed0254a8a769c021fca7 862 SUPERFAMILY SSF53732 377 857 2.22E-148 T 12-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 Vc3S01_0588 c07f688e3befed0254a8a769c021fca7 862 Gene3D G3DSA:3.30.499.10 399 526 1.1E-149 T 12-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 Vc3S01_0588 c07f688e3befed0254a8a769c021fca7 862 Gene3D G3DSA:3.40.1060.10 382 678 1.1E-149 T 12-10-2018 IPR015932 Aconitase, domain 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-1268020|Reactome: R-HSA-71403 Vc3S01_0588 c07f688e3befed0254a8a769c021fca7 862 Pfam PF11791 Aconitate B N-terminal domain 4 156 5.6E-65 T 12-10-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 Vc3S01_0588 c07f688e3befed0254a8a769c021fca7 862 ProSitePatterns PS01244 Aconitase family signature 2. 758 771 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Vc3S01_0588 c07f688e3befed0254a8a769c021fca7 862 PIRSF PIRSF036687 1 856 0.0 T 12-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 Vc3S01_0588 c07f688e3befed0254a8a769c021fca7 862 ProSitePatterns PS00450 Aconitase family signature 1. 699 716 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Vc3S01_0588 c07f688e3befed0254a8a769c021fca7 862 Gene3D G3DSA:1.25.40.310 1 160 2.1E-70 T 12-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 Vc3S01_0588 c07f688e3befed0254a8a769c021fca7 862 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 850 0.0 T 12-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 Vc3S01_0588 c07f688e3befed0254a8a769c021fca7 862 Gene3D G3DSA:3.20.19.10 162 358 1.6E-75 T 12-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 Vc3S01_0588 c07f688e3befed0254a8a769c021fca7 862 Gene3D G3DSA:3.30.499.10 680 862 7.1E-73 T 12-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 Vc3S01_0588 c07f688e3befed0254a8a769c021fca7 862 SUPERFAMILY SSF52016 162 369 7.85E-67 T 12-10-2018 Vc3S01_0588 c07f688e3befed0254a8a769c021fca7 862 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 379 1.4E-96 T 12-10-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 Vc3S01_0588 c07f688e3befed0254a8a769c021fca7 862 Pfam PF00330 Aconitase family (aconitate hydratase) 469 815 4.4E-42 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Vc3S01_0588 c07f688e3befed0254a8a769c021fca7 862 SUPERFAMILY SSF74778 2 159 1.26E-66 T 12-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 Vc3S01_2535 255e08b0483ed6c67eaecae940704479 561 Gene3D G3DSA:2.60.40.1180 481 559 1.5E-18 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta Vc3S01_2535 255e08b0483ed6c67eaecae940704479 561 SUPERFAMILY SSF51445 9 477 4.09E-162 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily Vc3S01_2535 255e08b0483ed6c67eaecae940704479 561 Pfam PF00128 Alpha amylase, catalytic domain 33 376 4.8E-128 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Vc3S01_2535 255e08b0483ed6c67eaecae940704479 561 SMART SM00642 18 419 1.4E-161 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Vc3S01_2535 255e08b0483ed6c67eaecae940704479 561 Gene3D G3DSA:3.90.400.10 114 175 4.1E-30 T 12-10-2018 Vc3S01_2535 255e08b0483ed6c67eaecae940704479 561 Pfam PF16657 Maltogenic Amylase, C-terminal domain 480 555 2.6E-8 T 12-10-2018 IPR032091 Maltogenic Amylase, C-terminal Vc3S01_2535 255e08b0483ed6c67eaecae940704479 561 SUPERFAMILY SSF51011 480 559 9.6E-17 T 12-10-2018 Vc3S01_2535 255e08b0483ed6c67eaecae940704479 561 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 10 557 2.3E-266 T 12-10-2018 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 Vc3S01_2535 255e08b0483ed6c67eaecae940704479 561 Gene3D G3DSA:3.20.20.80 1 113 9.5E-51 T 12-10-2018 Vc3S01_2535 255e08b0483ed6c67eaecae940704479 561 Gene3D G3DSA:3.20.20.80 176 480 2.6E-115 T 12-10-2018 Vc3S01_1188 f4eab367d4bc5fa7c90df94f51e34b04 303 Pfam PF03466 LysR substrate binding domain 89 293 3.3E-41 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_1188 f4eab367d4bc5fa7c90df94f51e34b04 303 SUPERFAMILY SSF46785 1 112 2.2E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_1188 f4eab367d4bc5fa7c90df94f51e34b04 303 SUPERFAMILY SSF53850 89 296 1.18E-39 T 12-10-2018 Vc3S01_1188 f4eab367d4bc5fa7c90df94f51e34b04 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 9.5E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_1188 f4eab367d4bc5fa7c90df94f51e34b04 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 9.5E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_1188 f4eab367d4bc5fa7c90df94f51e34b04 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 9.5E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_1188 f4eab367d4bc5fa7c90df94f51e34b04 303 Gene3D G3DSA:3.40.190.10 93 290 4.4E-72 T 12-10-2018 Vc3S01_1188 f4eab367d4bc5fa7c90df94f51e34b04 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 2.8E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_1188 f4eab367d4bc5fa7c90df94f51e34b04 303 Gene3D G3DSA:1.10.10.10 1 92 2.7E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_1188 f4eab367d4bc5fa7c90df94f51e34b04 303 Gene3D G3DSA:3.40.190.10 163 267 4.4E-72 T 12-10-2018 Vc3S01_3064 e2cf2b15bc3be5daae158c894e4bdd1d 291 Pfam PF01430 Hsp33 protein 6 272 3.6E-80 T 12-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 Vc3S01_3064 e2cf2b15bc3be5daae158c894e4bdd1d 291 SUPERFAMILY SSF64397 4 231 3.92E-75 T 12-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 Vc3S01_3064 e2cf2b15bc3be5daae158c894e4bdd1d 291 Gene3D G3DSA:3.90.1280.10 225 284 1.4E-20 T 12-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 Vc3S01_3064 e2cf2b15bc3be5daae158c894e4bdd1d 291 PIRSF PIRSF005261 1 284 8.1E-71 T 12-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 Vc3S01_3064 e2cf2b15bc3be5daae158c894e4bdd1d 291 SUPERFAMILY SSF118352 223 281 2.75E-18 T 12-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 Vc3S01_3064 e2cf2b15bc3be5daae158c894e4bdd1d 291 Gene3D G3DSA:3.55.30.10 1 175 5.6E-63 T 12-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 Vc3S01_3064 e2cf2b15bc3be5daae158c894e4bdd1d 291 Hamap MF_00117 33 kDa chaperonin [hslO]. 3 283 32.219 T 12-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 Vc3S01_3064 e2cf2b15bc3be5daae158c894e4bdd1d 291 Gene3D G3DSA:1.10.287.480 178 224 1.1E-22 T 12-10-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily Vc3S01_1215 0e46036c3997f94b37f589c71a62b0e8 494 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 271 426 4.6E-43 T 12-10-2018 IPR001162 UvrC family homology region Vc3S01_1215 0e46036c3997f94b37f589c71a62b0e8 494 SMART SM00278 472 491 300.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Vc3S01_1215 0e46036c3997f94b37f589c71a62b0e8 494 SMART SM00278 440 459 0.24 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Vc3S01_1215 0e46036c3997f94b37f589c71a62b0e8 494 SUPERFAMILY SSF46600 74 127 3.53E-13 T 12-10-2018 IPR036876 UVR domain superfamily Vc3S01_1215 0e46036c3997f94b37f589c71a62b0e8 494 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 1 473 6.5E-158 T 12-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 Vc3S01_1215 0e46036c3997f94b37f589c71a62b0e8 494 Gene3D G3DSA:3.30.420.340 264 436 3.7E-45 T 12-10-2018 IPR038476 UvrC homology region 2 superfamily Vc3S01_1215 0e46036c3997f94b37f589c71a62b0e8 494 Pfam PF02151 UvrB/uvrC motif 88 122 1.2E-8 T 12-10-2018 IPR001943 UVR domain GO:0005515 Vc3S01_1215 0e46036c3997f94b37f589c71a62b0e8 494 Pfam PF14520 Helix-hairpin-helix domain 442 493 2.4E-9 T 12-10-2018 Vc3S01_1215 0e46036c3997f94b37f589c71a62b0e8 494 SUPERFAMILY SSF47781 405 493 2.51E-19 T 12-10-2018 IPR010994 RuvA domain 2-like Vc3S01_1215 0e46036c3997f94b37f589c71a62b0e8 494 Gene3D G3DSA:1.10.150.20 439 494 8.3E-25 T 12-10-2018 Vc3S01_p20025 541a2ddfae295d7fbf093bb5bd1b2712 747 SUPERFAMILY SSF52540 2 688 3.9E-104 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_p20025 541a2ddfae295d7fbf093bb5bd1b2712 747 Pfam PF13361 UvrD-like helicase C-terminal domain 297 667 1.2E-43 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Vc3S01_p20025 541a2ddfae295d7fbf093bb5bd1b2712 747 Gene3D G3DSA:3.40.50.300 3 289 9.1E-55 T 12-10-2018 Vc3S01_p20025 541a2ddfae295d7fbf093bb5bd1b2712 747 Gene3D G3DSA:1.10.486.10 405 600 2.8E-54 T 12-10-2018 Vc3S01_p20025 541a2ddfae295d7fbf093bb5bd1b2712 747 Gene3D G3DSA:1.10.10.160 112 207 9.1E-55 T 12-10-2018 IPR013986 DExx box DNA helicase domain superfamily Vc3S01_p20025 541a2ddfae295d7fbf093bb5bd1b2712 747 Gene3D G3DSA:3.40.50.300 299 684 2.8E-54 T 12-10-2018 Vc3S01_p20025 541a2ddfae295d7fbf093bb5bd1b2712 747 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 289 6.6E-48 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 Vc3S01_1867 87e0768b84b6053a900b3127c14e0677 441 Gene3D G3DSA:3.50.50.60 2 433 1.3E-110 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_1867 87e0768b84b6053a900b3127c14e0677 441 TIGRFAM TIGR04439 histamin_N_OH: putative histamine N-monooxygenase 7 436 6.4E-238 T 12-10-2018 IPR031043 Putative histamine N-monooxygenase Vc3S01_1867 87e0768b84b6053a900b3127c14e0677 441 SUPERFAMILY SSF51905 149 357 1.36E-5 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_1867 87e0768b84b6053a900b3127c14e0677 441 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 5 346 3.4E-111 T 12-10-2018 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase Vc3S01_1867 87e0768b84b6053a900b3127c14e0677 441 SUPERFAMILY SSF51905 5 273 1.3E-16 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_0795 d4fbca814c0d64385aa9c2343bf74bf2 1159 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1030 0.0 T 12-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Vc3S01_0795 d4fbca814c0d64385aa9c2343bf74bf2 1159 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 292 735 1.2E-173 T 12-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Vc3S01_0795 d4fbca814c0d64385aa9c2343bf74bf2 1159 Pfam PF14579 Helix-hairpin-helix motif 809 897 2.2E-25 T 12-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Vc3S01_0795 d4fbca814c0d64385aa9c2343bf74bf2 1159 Pfam PF02811 PHP domain 8 172 2.1E-42 T 12-10-2018 IPR004013 PHP domain GO:0003824 Vc3S01_0795 d4fbca814c0d64385aa9c2343bf74bf2 1159 Pfam PF01336 OB-fold nucleic acid binding domain 993 1071 5.6E-11 T 12-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 Vc3S01_0795 d4fbca814c0d64385aa9c2343bf74bf2 1159 SUPERFAMILY SSF89550 5 263 1.02E-11 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Vc3S01_0795 d4fbca814c0d64385aa9c2343bf74bf2 1159 SUPERFAMILY SSF50249 978 1064 9.35E-6 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Vc3S01_0795 d4fbca814c0d64385aa9c2343bf74bf2 1159 Gene3D G3DSA:3.20.20.140 1 270 3.2E-90 T 12-10-2018 Vc3S01_0795 d4fbca814c0d64385aa9c2343bf74bf2 1159 Gene3D G3DSA:1.10.10.1600 433 510 3.1E-32 T 12-10-2018 Vc3S01_0795 d4fbca814c0d64385aa9c2343bf74bf2 1159 Gene3D G3DSA:2.40.50.140 984 1072 2.2E-9 T 12-10-2018 Vc3S01_0795 d4fbca814c0d64385aa9c2343bf74bf2 1159 SMART SM00481 7 74 2.1E-23 T 12-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal Vc3S01_0667 cf40b13421d2fe6d4f3df8b99471ff61 563 Pfam PF00501 AMP-binding enzyme 24 440 2.3E-89 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Vc3S01_0667 cf40b13421d2fe6d4f3df8b99471ff61 563 SUPERFAMILY SSF56801 16 547 4.97E-111 T 12-10-2018 Vc3S01_0667 cf40b13421d2fe6d4f3df8b99471ff61 563 Gene3D G3DSA:3.40.50.12780 16 436 1.7E-85 T 12-10-2018 Vc3S01_0667 cf40b13421d2fe6d4f3df8b99471ff61 563 ProSitePatterns PS00455 Putative AMP-binding domain signature. 182 193 - T 12-10-2018 IPR020845 AMP-binding, conserved site Vc3S01_1437 1993e42f837701cc12af682b112e5354 146 SUPERFAMILY SSF158682 2 144 6.54E-30 T 12-10-2018 IPR029024 TerB-like Vc3S01_1437 1993e42f837701cc12af682b112e5354 146 Gene3D G3DSA:1.10.3680.10 2 139 4.8E-20 T 12-10-2018 IPR029024 TerB-like Vc3S01_1437 1993e42f837701cc12af682b112e5354 146 Pfam PF05099 Tellurite resistance protein TerB 19 143 1.2E-39 T 12-10-2018 IPR007791 Co-chaperone DjlA, N-terminal Vc3S01_1144 3fc3c9e6e370c1915d82d38a6086f437 256 SUPERFAMILY SSF56931 20 254 8.89E-63 T 12-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 Vc3S01_1144 3fc3c9e6e370c1915d82d38a6086f437 256 Pfam PF02253 Phospholipase A1 25 253 4.8E-53 T 12-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 Vc3S01_1144 3fc3c9e6e370c1915d82d38a6086f437 256 PRINTS PR01486 Bacterial phospholipase A1 protein signature 227 247 1.0E-5 T 12-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 Vc3S01_1144 3fc3c9e6e370c1915d82d38a6086f437 256 PRINTS PR01486 Bacterial phospholipase A1 protein signature 169 187 1.0E-5 T 12-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 Vc3S01_1144 3fc3c9e6e370c1915d82d38a6086f437 256 PRINTS PR01486 Bacterial phospholipase A1 protein signature 59 76 1.0E-5 T 12-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 Vc3S01_1144 3fc3c9e6e370c1915d82d38a6086f437 256 Gene3D G3DSA:2.40.230.10 14 256 3.7E-56 T 12-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 Vc3S01_0546 161be33677f69225a6f66f531b02aabc 945 Gene3D G3DSA:3.30.830.10 41 265 9.4E-67 T 12-10-2018 Vc3S01_0546 161be33677f69225a6f66f531b02aabc 945 SUPERFAMILY SSF63411 43 252 4.67E-56 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Vc3S01_0546 161be33677f69225a6f66f531b02aabc 945 Pfam PF00675 Insulinase (Peptidase family M16) 60 144 8.0E-17 T 12-10-2018 IPR011765 Peptidase M16, N-terminal Vc3S01_0546 161be33677f69225a6f66f531b02aabc 945 Pfam PF00675 Insulinase (Peptidase family M16) 534 639 1.0E-8 T 12-10-2018 IPR011765 Peptidase M16, N-terminal Vc3S01_0546 161be33677f69225a6f66f531b02aabc 945 SUPERFAMILY SSF63411 733 934 2.67E-41 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Vc3S01_0546 161be33677f69225a6f66f531b02aabc 945 Gene3D G3DSA:3.30.830.10 268 466 6.0E-34 T 12-10-2018 Vc3S01_0546 161be33677f69225a6f66f531b02aabc 945 Gene3D G3DSA:3.30.830.10 737 928 6.5E-36 T 12-10-2018 Vc3S01_0546 161be33677f69225a6f66f531b02aabc 945 Pfam PF05193 Peptidase M16 inactive domain 680 853 2.7E-20 T 12-10-2018 IPR007863 Peptidase M16, C-terminal Vc3S01_0546 161be33677f69225a6f66f531b02aabc 945 Pfam PF05193 Peptidase M16 inactive domain 213 388 9.0E-32 T 12-10-2018 IPR007863 Peptidase M16, C-terminal Vc3S01_0546 161be33677f69225a6f66f531b02aabc 945 SUPERFAMILY SSF63411 513 715 2.67E-41 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Vc3S01_0546 161be33677f69225a6f66f531b02aabc 945 SUPERFAMILY SSF63411 270 462 6.67E-32 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Vc3S01_0546 161be33677f69225a6f66f531b02aabc 945 Gene3D G3DSA:3.30.830.10 519 724 1.3E-40 T 12-10-2018 Vc3S01_2793 159e4075edcd5f00e7d41ca683d1b136 245 SUPERFAMILY SSF46626 16 208 6.02E-48 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Vc3S01_2793 159e4075edcd5f00e7d41ca683d1b136 245 Gene3D G3DSA:1.10.760.10 26 210 1.9E-15 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Vc3S01_2793 159e4075edcd5f00e7d41ca683d1b136 245 Pfam PF02167 Cytochrome C1 family 34 244 3.8E-14 T 12-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 Vc3S01_3193 50e42c4e971a41178693a8b90701248e 548 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 167 2.5E-55 T 12-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 Vc3S01_3193 50e42c4e971a41178693a8b90701248e 548 SUPERFAMILY SSF52518 1 177 5.0E-62 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold Vc3S01_3193 50e42c4e971a41178693a8b90701248e 548 SUPERFAMILY SSF52467 181 341 5.51E-55 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Vc3S01_3193 50e42c4e971a41178693a8b90701248e 548 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 412 431 - T 12-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 Vc3S01_3193 50e42c4e971a41178693a8b90701248e 548 Gene3D G3DSA:3.40.50.970 350 548 1.8E-66 T 12-10-2018 Vc3S01_3193 50e42c4e971a41178693a8b90701248e 548 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 1 546 9.0E-211 T 12-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 Vc3S01_3193 50e42c4e971a41178693a8b90701248e 548 SUPERFAMILY SSF52518 358 545 1.02E-65 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold Vc3S01_3193 50e42c4e971a41178693a8b90701248e 548 Gene3D G3DSA:3.40.50.1220 179 349 1.9E-51 T 12-10-2018 Vc3S01_3193 50e42c4e971a41178693a8b90701248e 548 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 187 322 1.4E-39 T 12-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 Vc3S01_3193 50e42c4e971a41178693a8b90701248e 548 Gene3D G3DSA:3.40.50.970 1 174 1.4E-66 T 12-10-2018 Vc3S01_3193 50e42c4e971a41178693a8b90701248e 548 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 375 523 1.2E-48 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Vc3S01_A1161 14aef71f6bddbf88f3b2e69c40382821 365 SUPERFAMILY SSF53901 7 325 1.34E-65 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 Vc3S01_A1161 14aef71f6bddbf88f3b2e69c40382821 365 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 235 324 1.1E-37 T 12-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Vc3S01_A1161 14aef71f6bddbf88f3b2e69c40382821 365 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 4 324 66.178 T 12-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Vc3S01_A1161 14aef71f6bddbf88f3b2e69c40382821 365 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 5 324 5.7E-111 T 12-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Vc3S01_A1161 14aef71f6bddbf88f3b2e69c40382821 365 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 107 184 1.7E-28 T 12-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Vc3S01_A1161 14aef71f6bddbf88f3b2e69c40382821 365 Gene3D G3DSA:3.40.47.10 1 361 4.8E-154 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 Vc3S01_A1880 6fd13cf6ee2af6d4f9195f8fb73b448c 623 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 425 575 1.1E-24 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Vc3S01_A1880 6fd13cf6ee2af6d4f9195f8fb73b448c 623 Gene3D G3DSA:3.40.50.970 395 591 6.8E-34 T 12-10-2018 Vc3S01_A1880 6fd13cf6ee2af6d4f9195f8fb73b448c 623 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 7 196 4.8E-33 T 12-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 Vc3S01_A1880 6fd13cf6ee2af6d4f9195f8fb73b448c 623 Gene3D G3DSA:3.40.50.1220 212 394 3.7E-36 T 12-10-2018 Vc3S01_A1880 6fd13cf6ee2af6d4f9195f8fb73b448c 623 SUPERFAMILY SSF52467 181 382 1.87E-40 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Vc3S01_A1880 6fd13cf6ee2af6d4f9195f8fb73b448c 623 SUPERFAMILY SSF52518 1 210 6.45E-29 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold Vc3S01_A1880 6fd13cf6ee2af6d4f9195f8fb73b448c 623 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 220 350 7.7E-30 T 12-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 Vc3S01_A1880 6fd13cf6ee2af6d4f9195f8fb73b448c 623 TIGRFAM TIGR04377 myo_inos_iolD: 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase 5 620 3.0E-260 T 12-10-2018 IPR030817 3,5/4-Trihydroxycyclohexa-1,2-dione hydrolase GO:0016823|GO:0019310|GO:0030976 KEGG: 00562+3.7.1.22 Vc3S01_A1880 6fd13cf6ee2af6d4f9195f8fb73b448c 623 SUPERFAMILY SSF52518 399 584 4.07E-40 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold Vc3S01_A1880 6fd13cf6ee2af6d4f9195f8fb73b448c 623 Gene3D G3DSA:3.40.50.970 8 197 4.0E-27 T 12-10-2018 Vc3S01_0839 3c159618f6c0de8b5b3fde64884f8363 450 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 141 172 - T 12-10-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 Vc3S01_0839 3c159618f6c0de8b5b3fde64884f8363 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 167 178 2.2E-39 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Vc3S01_0839 3c159618f6c0de8b5b3fde64884f8363 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 74 90 2.2E-39 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Vc3S01_0839 3c159618f6c0de8b5b3fde64884f8363 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 193 205 2.2E-39 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Vc3S01_0839 3c159618f6c0de8b5b3fde64884f8363 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 5 20 2.2E-39 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Vc3S01_0839 3c159618f6c0de8b5b3fde64884f8363 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 112 132 2.2E-39 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Vc3S01_0839 3c159618f6c0de8b5b3fde64884f8363 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 141 158 2.2E-39 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Vc3S01_0839 3c159618f6c0de8b5b3fde64884f8363 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 96 109 2.2E-39 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Vc3S01_0839 3c159618f6c0de8b5b3fde64884f8363 450 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 197 420 1.1E-62 T 12-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 Vc3S01_0839 3c159618f6c0de8b5b3fde64884f8363 450 Pfam PF02056 Family 4 glycosyl hydrolase 5 187 1.1E-75 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Vc3S01_0839 3c159618f6c0de8b5b3fde64884f8363 450 SUPERFAMILY SSF51735 3 170 9.98E-52 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_0839 3c159618f6c0de8b5b3fde64884f8363 450 Gene3D G3DSA:3.90.1820.20 1 443 5.6E-138 T 12-10-2018 Vc3S01_0839 3c159618f6c0de8b5b3fde64884f8363 450 SUPERFAMILY SSF56327 173 448 2.0E-73 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 Vc3S01_0432 e5c6feeacbfaf07095c4e536d1e78c4e 309 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 7 307 38.929 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Vc3S01_0432 e5c6feeacbfaf07095c4e536d1e78c4e 309 Gene3D G3DSA:3.40.50.1370 8 304 5.0E-122 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Vc3S01_0432 e5c6feeacbfaf07095c4e536d1e78c4e 309 SUPERFAMILY SSF53671 4 307 6.68E-103 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Vc3S01_0432 e5c6feeacbfaf07095c4e536d1e78c4e 309 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 303 3.5E-33 T 12-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 Vc3S01_0432 e5c6feeacbfaf07095c4e536d1e78c4e 309 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 2.2E-45 T 12-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 Vc3S01_0432 e5c6feeacbfaf07095c4e536d1e78c4e 309 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Vc3S01_0432 e5c6feeacbfaf07095c4e536d1e78c4e 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 6.1E-27 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Vc3S01_0432 e5c6feeacbfaf07095c4e536d1e78c4e 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 6.1E-27 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Vc3S01_0432 e5c6feeacbfaf07095c4e536d1e78c4e 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 6.1E-27 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Vc3S01_0432 e5c6feeacbfaf07095c4e536d1e78c4e 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 6.1E-27 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Vc3S01_0432 e5c6feeacbfaf07095c4e536d1e78c4e 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 134 151 7.4E-38 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Vc3S01_0432 e5c6feeacbfaf07095c4e536d1e78c4e 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 226 235 7.4E-38 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Vc3S01_0432 e5c6feeacbfaf07095c4e536d1e78c4e 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 300 7.4E-38 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Vc3S01_0432 e5c6feeacbfaf07095c4e536d1e78c4e 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 79 88 7.4E-38 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Vc3S01_0432 e5c6feeacbfaf07095c4e536d1e78c4e 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 7.4E-38 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Vc3S01_0432 e5c6feeacbfaf07095c4e536d1e78c4e 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 264 269 7.4E-38 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Vc3S01_0432 e5c6feeacbfaf07095c4e536d1e78c4e 309 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 8 305 9.9E-117 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Vc3S01_0432 e5c6feeacbfaf07095c4e536d1e78c4e 309 Gene3D G3DSA:3.40.50.1370 135 292 5.0E-122 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Vc3S01_2364 f5ccaf9053c3e75a9276471c3a0dbf21 123 Pfam PF04480 Protein of unknown function (DUF559) 11 116 1.2E-33 T 12-10-2018 IPR007569 Protein of unknown function DUF559 Vc3S01_2364 f5ccaf9053c3e75a9276471c3a0dbf21 123 Gene3D G3DSA:3.40.960.10 19 120 1.5E-31 T 12-10-2018 Vc3S01_2364 f5ccaf9053c3e75a9276471c3a0dbf21 123 SUPERFAMILY SSF52980 9 118 2.73E-16 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Vc3S01_2564 cd005adc565db92180fa95d2d880bb20 155 Pfam PF01029 NusB family 11 149 2.7E-35 T 12-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 Vc3S01_2564 cd005adc565db92180fa95d2d880bb20 155 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 8 153 23.065 T 12-10-2018 IPR011605 NusB antitermination factor GO:0006353 Vc3S01_2564 cd005adc565db92180fa95d2d880bb20 155 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 10 150 8.9E-43 T 12-10-2018 IPR011605 NusB antitermination factor GO:0006353 Vc3S01_2564 cd005adc565db92180fa95d2d880bb20 155 Gene3D G3DSA:1.10.940.10 3 155 8.1E-48 T 12-10-2018 IPR035926 NusB-like superfamily Vc3S01_2564 cd005adc565db92180fa95d2d880bb20 155 SUPERFAMILY SSF48013 7 153 3.53E-39 T 12-10-2018 IPR035926 NusB-like superfamily Vc3S01_1131 5270b674b1cde4ef6a1073b1e2c4e6e0 615 Gene3D G3DSA:3.10.105.10 322 548 3.2E-41 T 12-10-2018 Vc3S01_1131 5270b674b1cde4ef6a1073b1e2c4e6e0 615 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 93 490 2.9E-60 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain Vc3S01_1131 5270b674b1cde4ef6a1073b1e2c4e6e0 615 PIRSF PIRSF002741 2 576 1.3E-62 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Vc3S01_1131 5270b674b1cde4ef6a1073b1e2c4e6e0 615 Gene3D G3DSA:3.40.190.10 17 321 3.1E-43 T 12-10-2018 Vc3S01_1131 5270b674b1cde4ef6a1073b1e2c4e6e0 615 SUPERFAMILY SSF53850 45 568 3.26E-92 T 12-10-2018 Vc3S01_p30086 dc98915a42c245ee7dc3a7323d37ae04 734 Gene3D G3DSA:2.70.20.10 215 488 5.8E-127 T 12-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 Vc3S01_p30086 dc98915a42c245ee7dc3a7323d37ae04 734 Gene3D G3DSA:3.40.50.140 1 154 7.4E-47 T 12-10-2018 Vc3S01_p30086 dc98915a42c245ee7dc3a7323d37ae04 734 TIGRFAM TIGR01056 topB: DNA topoisomerase III 2 664 1.7E-157 T 12-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 Vc3S01_p30086 dc98915a42c245ee7dc3a7323d37ae04 734 SMART SM00437 275 572 1.1E-52 T 12-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 Vc3S01_p30086 dc98915a42c245ee7dc3a7323d37ae04 734 SUPERFAMILY SSF56712 1 620 2.22E-141 T 12-10-2018 IPR023405 DNA topoisomerase, type IA, core domain Vc3S01_p30086 dc98915a42c245ee7dc3a7323d37ae04 734 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 684 722 6.8E-8 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 Vc3S01_p30086 dc98915a42c245ee7dc3a7323d37ae04 734 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 633 666 5.9E-10 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 Vc3S01_p30086 dc98915a42c245ee7dc3a7323d37ae04 734 SMART SM00436 126 221 5.2E-8 T 12-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 Vc3S01_p30086 dc98915a42c245ee7dc3a7323d37ae04 734 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 312 327 - T 12-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 Vc3S01_p30086 dc98915a42c245ee7dc3a7323d37ae04 734 Pfam PF01131 DNA topoisomerase 156 606 1.6E-85 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Vc3S01_p30086 dc98915a42c245ee7dc3a7323d37ae04 734 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 318 327 7.5E-18 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Vc3S01_p30086 dc98915a42c245ee7dc3a7323d37ae04 734 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 191 209 7.5E-18 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Vc3S01_p30086 dc98915a42c245ee7dc3a7323d37ae04 734 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 401 417 7.5E-18 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Vc3S01_p30086 dc98915a42c245ee7dc3a7323d37ae04 734 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 100 113 7.5E-18 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Vc3S01_p30086 dc98915a42c245ee7dc3a7323d37ae04 734 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 528 542 7.5E-18 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Vc3S01_p30086 dc98915a42c245ee7dc3a7323d37ae04 734 Gene3D G3DSA:1.10.460.10 160 615 5.8E-127 T 12-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 Vc3S01_p30086 dc98915a42c245ee7dc3a7323d37ae04 734 Gene3D G3DSA:1.10.290.10 284 415 5.8E-127 T 12-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 Vc3S01_p30086 dc98915a42c245ee7dc3a7323d37ae04 734 SUPERFAMILY SSF57783 629 664 2.38E-9 T 12-10-2018 Vc3S01_p30086 dc98915a42c245ee7dc3a7323d37ae04 734 Pfam PF01751 Toprim domain 3 131 8.1E-12 T 12-10-2018 IPR006171 TOPRIM domain Vc3S01_p30086 dc98915a42c245ee7dc3a7323d37ae04 734 SMART SM00493 1 126 9.7E-13 T 12-10-2018 IPR006171 TOPRIM domain Vc3S01_p10077 b54fd9aef80fd18c89729f82a6739b9f 290 Gene3D G3DSA:2.60.40.2500 179 289 4.0E-5 T 12-10-2018 IPR038161 VirB9/CagX/TrbG, C-terminal domain superfamily Vc3S01_p10077 b54fd9aef80fd18c89729f82a6739b9f 290 TIGRFAM TIGR02775 TrbG_Ti: P-type conjugative transfer protein TrbG 66 275 1.0E-77 T 12-10-2018 IPR014142 P-type conjugative transfer protein TrbG Vc3S01_p10077 b54fd9aef80fd18c89729f82a6739b9f 290 Pfam PF03524 Conjugal transfer protein 75 287 4.7E-46 T 12-10-2018 IPR010258 Conjugal transfer, TrbG/VirB9/CagX Vc3S01_2156 739af6cb9ccb0bd10cfbe483b0e66e4c 967 SUPERFAMILY SSF56399 642 860 2.21E-18 T 12-10-2018 Vc3S01_2156 739af6cb9ccb0bd10cfbe483b0e66e4c 967 Gene3D G3DSA:3.90.176.10 714 859 4.1E-20 T 12-10-2018 Vc3S01_2156 739af6cb9ccb0bd10cfbe483b0e66e4c 967 Pfam PF03496 ADP-ribosyltransferase exoenzyme 782 852 8.3E-8 T 12-10-2018 IPR003540 ADP ribosyltransferase GO:0005576|GO:0009405 Vc3S01_A0960 d8763ecc3cd5691a338f52b841fa6331 551 SMART SM00448 2 116 1.7E-32 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A0960 d8763ecc3cd5691a338f52b841fa6331 551 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 191 393 4.7E-37 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Vc3S01_A0960 d8763ecc3cd5691a338f52b841fa6331 551 Gene3D G3DSA:3.60.40.10 134 393 1.6E-50 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Vc3S01_A0960 d8763ecc3cd5691a338f52b841fa6331 551 Pfam PF00072 Response regulator receiver domain 4 117 4.3E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A0960 d8763ecc3cd5691a338f52b841fa6331 551 Gene3D G3DSA:3.30.565.10 408 551 7.7E-18 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_A0960 d8763ecc3cd5691a338f52b841fa6331 551 Pfam PF13581 Histidine kinase-like ATPase domain 415 548 4.5E-19 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_A0960 d8763ecc3cd5691a338f52b841fa6331 551 SUPERFAMILY SSF55874 436 542 4.58E-9 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_A0960 d8763ecc3cd5691a338f52b841fa6331 551 SMART SM00331 164 393 1.3E-16 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Vc3S01_A0960 d8763ecc3cd5691a338f52b841fa6331 551 Gene3D G3DSA:3.40.50.2300 1 133 8.9E-30 T 12-10-2018 Vc3S01_A0960 d8763ecc3cd5691a338f52b841fa6331 551 SUPERFAMILY SSF52172 1 157 1.71E-33 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_0532 e4ee32b20d2c9b93f2599f43f79a6a50 328 Pfam PF00140 Sigma-70 factor, region 1.2 51 84 4.0E-12 T 12-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Vc3S01_0532 e4ee32b20d2c9b93f2599f43f79a6a50 328 Gene3D G3DSA:1.10.601.10 3 158 9.6E-48 T 12-10-2018 Vc3S01_0532 e4ee32b20d2c9b93f2599f43f79a6a50 328 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 282 308 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Vc3S01_0532 e4ee32b20d2c9b93f2599f43f79a6a50 328 PRINTS PR00046 Major sigma-70 factor signature 282 297 6.2E-28 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Vc3S01_0532 e4ee32b20d2c9b93f2599f43f79a6a50 328 PRINTS PR00046 Major sigma-70 factor signature 261 273 6.2E-28 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Vc3S01_0532 e4ee32b20d2c9b93f2599f43f79a6a50 328 PRINTS PR00046 Major sigma-70 factor signature 297 308 6.2E-28 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Vc3S01_0532 e4ee32b20d2c9b93f2599f43f79a6a50 328 PRINTS PR00046 Major sigma-70 factor signature 137 145 6.2E-28 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Vc3S01_0532 e4ee32b20d2c9b93f2599f43f79a6a50 328 PRINTS PR00046 Major sigma-70 factor signature 113 126 6.2E-28 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Vc3S01_0532 e4ee32b20d2c9b93f2599f43f79a6a50 328 SUPERFAMILY SSF88659 162 235 2.09E-16 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Vc3S01_0532 e4ee32b20d2c9b93f2599f43f79a6a50 328 Pfam PF04539 Sigma-70 region 3 169 242 2.5E-22 T 12-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 Vc3S01_0532 e4ee32b20d2c9b93f2599f43f79a6a50 328 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 2 323 39.575 T 12-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Vc3S01_0532 e4ee32b20d2c9b93f2599f43f79a6a50 328 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 85 312 3.5E-36 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Vc3S01_0532 e4ee32b20d2c9b93f2599f43f79a6a50 328 Pfam PF04545 Sigma-70, region 4 257 310 2.2E-17 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Vc3S01_0532 e4ee32b20d2c9b93f2599f43f79a6a50 328 SUPERFAMILY SSF88659 219 318 1.87E-24 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Vc3S01_0532 e4ee32b20d2c9b93f2599f43f79a6a50 328 Gene3D G3DSA:1.10.10.10 239 319 2.9E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_0532 e4ee32b20d2c9b93f2599f43f79a6a50 328 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 113 126 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Vc3S01_0532 e4ee32b20d2c9b93f2599f43f79a6a50 328 Gene3D G3DSA:1.10.10.10 162 237 3.8E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_0532 e4ee32b20d2c9b93f2599f43f79a6a50 328 SUPERFAMILY SSF88946 50 159 9.42E-46 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Vc3S01_0532 e4ee32b20d2c9b93f2599f43f79a6a50 328 Pfam PF04542 Sigma-70 region 2 89 158 6.8E-20 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Vc3S01_0532 e4ee32b20d2c9b93f2599f43f79a6a50 328 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 44 323 5.5E-139 T 12-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Vc3S01_0195 5bad7f734a815099e38457322eaa5b77 650 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 81 3.0E-20 T 12-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 Vc3S01_0195 5bad7f734a815099e38457322eaa5b77 650 SUPERFAMILY SSF56801 8 644 7.33E-181 T 12-10-2018 Vc3S01_0195 5bad7f734a815099e38457322eaa5b77 650 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 646 52.531 T 12-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 Vc3S01_0195 5bad7f734a815099e38457322eaa5b77 650 Gene3D G3DSA:3.30.300.30 519 650 2.4E-31 T 12-10-2018 Vc3S01_0195 5bad7f734a815099e38457322eaa5b77 650 Pfam PF13193 AMP-binding enzyme C-terminal domain 532 610 4.9E-26 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Vc3S01_0195 5bad7f734a815099e38457322eaa5b77 650 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 644 0.0 T 12-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 Vc3S01_0195 5bad7f734a815099e38457322eaa5b77 650 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 12-10-2018 IPR020845 AMP-binding, conserved site Vc3S01_0195 5bad7f734a815099e38457322eaa5b77 650 Pfam PF00501 AMP-binding enzyme 84 523 6.0E-90 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Vc3S01_0195 5bad7f734a815099e38457322eaa5b77 650 Gene3D G3DSA:3.40.50.12780 50 516 1.6E-102 T 12-10-2018 Vc3S01_A1738 28c2dd4ccde8600a3ae8b959c81b0491 302 Pfam PF00892 EamA-like transporter family 9 138 2.9E-12 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Vc3S01_A1738 28c2dd4ccde8600a3ae8b959c81b0491 302 SUPERFAMILY SSF103481 42 142 1.19E-14 T 12-10-2018 Vc3S01_A1738 28c2dd4ccde8600a3ae8b959c81b0491 302 SUPERFAMILY SSF103481 181 281 1.7E-10 T 12-10-2018 Vc3S01_2008 63376be950461d1d45d68870735a50ba 401 Gene3D G3DSA:3.90.1150.10 256 391 7.6E-42 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Vc3S01_2008 63376be950461d1d45d68870735a50ba 401 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 199 213 - T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Vc3S01_2008 63376be950461d1d45d68870735a50ba 401 Gene3D G3DSA:3.40.640.10 3 255 8.4E-77 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Vc3S01_2008 63376be950461d1d45d68870735a50ba 401 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 387 4.9E-118 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Vc3S01_2008 63376be950461d1d45d68870735a50ba 401 SUPERFAMILY SSF53383 21 388 9.25E-99 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Vc3S01_2008 63376be950461d1d45d68870735a50ba 401 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 7 389 7.1E-172 T 12-10-2018 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 Vc3S01_2008 63376be950461d1d45d68870735a50ba 401 PIRSF PIRSF001434 1 391 9.4E-126 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Vc3S01_A1906 19b499d8178ec9eaf521f19ee3813b1f 263 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 89 122 - T 12-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Vc3S01_A1906 19b499d8178ec9eaf521f19ee3813b1f 263 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 11 218 2.9E-49 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Vc3S01_A1906 19b499d8178ec9eaf521f19ee3813b1f 263 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 9 244 4.8E-85 T 12-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Vc3S01_A1906 19b499d8178ec9eaf521f19ee3813b1f 263 SUPERFAMILY SSF53790 4 252 4.71E-76 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Vc3S01_A1906 19b499d8178ec9eaf521f19ee3813b1f 263 Gene3D G3DSA:3.40.1010.10 8 124 5.6E-39 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Vc3S01_A1906 19b499d8178ec9eaf521f19ee3813b1f 263 Gene3D G3DSA:3.30.950.10 125 262 4.4E-46 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Vc3S01_0746 0596fc84a15b0c5f644181e494ec8288 102 Pfam PF01722 BolA-like protein 10 83 1.3E-29 T 12-10-2018 IPR002634 BolA protein Vc3S01_0746 0596fc84a15b0c5f644181e494ec8288 102 Gene3D G3DSA:3.30.300.90 1 89 1.1E-34 T 12-10-2018 Vc3S01_0746 0596fc84a15b0c5f644181e494ec8288 102 SUPERFAMILY SSF82657 1 88 4.45E-31 T 12-10-2018 IPR036065 BolA-like superfamily Vc3S01_0746 0596fc84a15b0c5f644181e494ec8288 102 PIRSF PIRSF003113 1 99 2.2E-37 T 12-10-2018 IPR002634 BolA protein Vc3S01_1416 6259698e2b973df6ad449d4f43e74d7a 423 SUPERFAMILY SSF109604 26 194 2.65E-16 T 12-10-2018 Vc3S01_1416 6259698e2b973df6ad449d4f43e74d7a 423 TIGRFAM TIGR00277 HDIG: HDIG domain 249 339 2.6E-8 T 12-10-2018 IPR006675 HDIG domain Vc3S01_1416 6259698e2b973df6ad449d4f43e74d7a 423 SUPERFAMILY SSF109604 239 387 3.64E-33 T 12-10-2018 Vc3S01_1416 6259698e2b973df6ad449d4f43e74d7a 423 Pfam PF01966 HD domain 249 370 5.6E-19 T 12-10-2018 IPR006674 HD domain Vc3S01_1416 6259698e2b973df6ad449d4f43e74d7a 423 Pfam PF01966 HD domain 37 125 7.5E-6 T 12-10-2018 IPR006674 HD domain Vc3S01_1416 6259698e2b973df6ad449d4f43e74d7a 423 Gene3D G3DSA:1.10.3210.10 236 418 9.7E-52 T 12-10-2018 Vc3S01_1416 6259698e2b973df6ad449d4f43e74d7a 423 Gene3D G3DSA:1.10.3210.10 20 199 8.9E-20 T 12-10-2018 Vc3S01_1416 6259698e2b973df6ad449d4f43e74d7a 423 SMART SM00471 31 160 2.1 T 12-10-2018 IPR003607 HD/PDEase domain Vc3S01_1416 6259698e2b973df6ad449d4f43e74d7a 423 SMART SM00471 245 380 1.8E-11 T 12-10-2018 IPR003607 HD/PDEase domain Vc3S01_A1353 d96d8477d35b5ed071d64c41fd660991 446 SMART SM00388 229 291 8.7E-10 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_A1353 d96d8477d35b5ed071d64c41fd660991 446 SMART SM00304 173 228 5.1E-10 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Vc3S01_A1353 d96d8477d35b5ed071d64c41fd660991 446 Gene3D G3DSA:3.30.565.10 295 444 1.5E-27 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_A1353 d96d8477d35b5ed071d64c41fd660991 446 Gene3D G3DSA:1.10.287.130 177 292 1.3E-24 T 12-10-2018 Vc3S01_A1353 d96d8477d35b5ed071d64c41fd660991 446 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 337 444 4.8E-15 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_A1353 d96d8477d35b5ed071d64c41fd660991 446 SUPERFAMILY SSF55874 281 444 7.66E-32 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_A1353 d96d8477d35b5ed071d64c41fd660991 446 Pfam PF00512 His Kinase A (phospho-acceptor) domain 231 290 2.1E-10 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_A1353 d96d8477d35b5ed071d64c41fd660991 446 SMART SM00387 335 446 2.0E-23 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_A1353 d96d8477d35b5ed071d64c41fd660991 446 SUPERFAMILY SSF47384 213 291 1.79E-11 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Vc3S01_A1353 d96d8477d35b5ed071d64c41fd660991 446 Pfam PF00672 HAMP domain 173 222 9.2E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Vc3S01_A1353 d96d8477d35b5ed071d64c41fd660991 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 406 424 5.7E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_A1353 d96d8477d35b5ed071d64c41fd660991 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 400 5.7E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_A1353 d96d8477d35b5ed071d64c41fd660991 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 386 5.7E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_A1353 d96d8477d35b5ed071d64c41fd660991 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 430 443 5.7E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_A1353 d96d8477d35b5ed071d64c41fd660991 446 Pfam PF16750 Sensor domain of 2-component histidine kinase 37 144 2.7E-28 T 12-10-2018 IPR031930 2-component histidine kinase, sensor domain Vc3S01_A1353 d96d8477d35b5ed071d64c41fd660991 446 Gene3D G3DSA:3.30.450.170 26 145 1.8E-26 T 12-10-2018 IPR038428 2-component histidine kinase, sensor domain superfamily Vc3S01_A1353 d96d8477d35b5ed071d64c41fd660991 446 SUPERFAMILY SSF158472 173 225 4.58E-7 T 12-10-2018 Vc3S01_0129 66642e2c1d9de82bdc4df042e1a1bad1 179 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 15 174 23.567 T 12-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 Vc3S01_0129 66642e2c1d9de82bdc4df042e1a1bad1 179 Gene3D G3DSA:3.40.1410.10 10 174 8.4E-42 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Vc3S01_0129 66642e2c1d9de82bdc4df042e1a1bad1 179 Pfam PF04345 Chorismate lyase 14 178 3.6E-57 T 12-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 Vc3S01_0129 66642e2c1d9de82bdc4df042e1a1bad1 179 SUPERFAMILY SSF64288 7 174 4.39E-46 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Vc3S01_0229 c49c0852196c0d7f15fbcacc18ae0d66 252 Pfam PF13183 4Fe-4S dicluster domain 147 219 8.0E-11 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Vc3S01_0229 c49c0852196c0d7f15fbcacc18ae0d66 252 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 11 229 4.9E-95 T 12-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 Vc3S01_0229 c49c0852196c0d7f15fbcacc18ae0d66 252 SUPERFAMILY SSF54292 5 106 7.68E-30 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Vc3S01_0229 c49c0852196c0d7f15fbcacc18ae0d66 252 SUPERFAMILY SSF46548 107 226 1.73E-30 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Vc3S01_0229 c49c0852196c0d7f15fbcacc18ae0d66 252 Gene3D G3DSA:1.10.1060.10 107 244 4.1E-50 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Vc3S01_0229 c49c0852196c0d7f15fbcacc18ae0d66 252 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 9 111 6.9E-33 T 12-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 Vc3S01_0229 c49c0852196c0d7f15fbcacc18ae0d66 252 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 58 66 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 Vc3S01_0229 c49c0852196c0d7f15fbcacc18ae0d66 252 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Vc3S01_0229 c49c0852196c0d7f15fbcacc18ae0d66 252 Gene3D G3DSA:3.10.20.30 1 106 1.7E-35 T 12-10-2018 IPR012675 Beta-grasp domain superfamily Vc3S01_1508 81faf2f12c5a88d9723268602ef9c1cf 147 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 3 146 2.6E-58 T 12-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Vc3S01_1508 81faf2f12c5a88d9723268602ef9c1cf 147 Pfam PF01220 Dehydroquinase class II 3 144 7.9E-61 T 12-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Vc3S01_1508 81faf2f12c5a88d9723268602ef9c1cf 147 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 147 66.038 T 12-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Vc3S01_1508 81faf2f12c5a88d9723268602ef9c1cf 147 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 17 144 4.0E-41 T 12-10-2018 Vc3S01_1508 81faf2f12c5a88d9723268602ef9c1cf 147 PIRSF PIRSF001399 1 147 2.4E-60 T 12-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Vc3S01_1508 81faf2f12c5a88d9723268602ef9c1cf 147 Gene3D G3DSA:3.40.50.9100 1 147 1.0E-63 T 12-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Vc3S01_1508 81faf2f12c5a88d9723268602ef9c1cf 147 ProSitePatterns PS01029 Dehydroquinase class II signature. 7 24 - T 12-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Vc3S01_1508 81faf2f12c5a88d9723268602ef9c1cf 147 SUPERFAMILY SSF52304 3 146 2.62E-58 T 12-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Vc3S01_1441 58c6af9ddb29b59a0d4311bc485f1f1a 678 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 330 346 1.9E-25 T 12-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 Vc3S01_1441 58c6af9ddb29b59a0d4311bc485f1f1a 678 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 351 362 1.9E-25 T 12-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 Vc3S01_1441 58c6af9ddb29b59a0d4311bc485f1f1a 678 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 413 429 1.9E-25 T 12-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 Vc3S01_1441 58c6af9ddb29b59a0d4311bc485f1f1a 678 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 296 316 1.9E-25 T 12-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 Vc3S01_1441 58c6af9ddb29b59a0d4311bc485f1f1a 678 Pfam PF03413 Peptidase propeptide and YPEB domain 112 186 1.9E-5 T 12-10-2018 IPR025711 PepSY domain Vc3S01_1441 58c6af9ddb29b59a0d4311bc485f1f1a 678 Gene3D G3DSA:2.60.120.380 514 610 1.6E-12 T 12-10-2018 Vc3S01_1441 58c6af9ddb29b59a0d4311bc485f1f1a 678 SUPERFAMILY SSF55486 193 487 3.66E-83 T 12-10-2018 Vc3S01_1441 58c6af9ddb29b59a0d4311bc485f1f1a 678 Gene3D G3DSA:3.10.450.40 108 191 2.7E-19 T 12-10-2018 Vc3S01_1441 58c6af9ddb29b59a0d4311bc485f1f1a 678 Gene3D G3DSA:3.10.170.10 192 343 2.3E-58 T 12-10-2018 Vc3S01_1441 58c6af9ddb29b59a0d4311bc485f1f1a 678 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 202 339 4.6E-34 T 12-10-2018 IPR013856 Peptidase M4 domain GO:0004222 Vc3S01_1441 58c6af9ddb29b59a0d4311bc485f1f1a 678 Gene3D G3DSA:1.10.390.10 344 490 3.0E-46 T 12-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily Vc3S01_1441 58c6af9ddb29b59a0d4311bc485f1f1a 678 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 342 486 2.7E-34 T 12-10-2018 IPR001570 Peptidase M4, C-terminal GO:0004222 Vc3S01_1219 dc27f1fdeb4ae9900498b9756430d158 377 Gene3D G3DSA:3.20.20.10 15 242 2.8E-141 T 12-10-2018 IPR029066 PLP-binding barrel Vc3S01_1219 dc27f1fdeb4ae9900498b9756430d158 377 SUPERFAMILY SSF50621 212 359 1.36E-22 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Vc3S01_1219 dc27f1fdeb4ae9900498b9756430d158 377 PIRSF PIRSF038941 1 372 2.0E-125 T 12-10-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 Vc3S01_1219 dc27f1fdeb4ae9900498b9756430d158 377 TIGRFAM TIGR01047 nspC: carboxynorspermidine decarboxylase 6 370 4.4E-161 T 12-10-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 Vc3S01_1219 dc27f1fdeb4ae9900498b9756430d158 377 SUPERFAMILY SSF51419 14 242 5.89E-42 T 12-10-2018 IPR029066 PLP-binding barrel Vc3S01_1219 dc27f1fdeb4ae9900498b9756430d158 377 Gene3D G3DSA:2.40.37.10 7 372 2.8E-141 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Vc3S01_A1862 6eefbb8933b50e279aef75c050170599 726 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 127 717 2.4E-190 T 12-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 Vc3S01_A1862 6eefbb8933b50e279aef75c050170599 726 SUPERFAMILY SSF51445 163 717 1.66E-148 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily Vc3S01_A1862 6eefbb8933b50e279aef75c050170599 726 Pfam PF02446 4-alpha-glucanotransferase 177 699 4.0E-126 T 12-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 Vc3S01_1201 12bb43752e83b0d504d414e9da9536b8 336 Gene3D G3DSA:3.40.1030.10 71 325 1.0E-124 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Vc3S01_1201 12bb43752e83b0d504d414e9da9536b8 336 Pfam PF02885 Glycosyl transferase family, helical bundle domain 7 67 5.4E-17 T 12-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 Vc3S01_1201 12bb43752e83b0d504d414e9da9536b8 336 Pfam PF00591 Glycosyl transferase family, a/b domain 76 326 8.5E-106 T 12-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Vc3S01_1201 12bb43752e83b0d504d414e9da9536b8 336 SUPERFAMILY SSF47648 5 71 5.23E-19 T 12-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Vc3S01_1201 12bb43752e83b0d504d414e9da9536b8 336 Gene3D G3DSA:1.20.970.10 14 187 1.0E-124 T 12-10-2018 Vc3S01_1201 12bb43752e83b0d504d414e9da9536b8 336 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 7 335 39.877 T 12-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 Vc3S01_1201 12bb43752e83b0d504d414e9da9536b8 336 SUPERFAMILY SSF52418 74 333 1.7E-94 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Vc3S01_1201 12bb43752e83b0d504d414e9da9536b8 336 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 10 333 6.8E-129 T 12-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 Vc3S01_A0548 ddc86e60b2d42ed63a7382dc0e14e06a 276 SUPERFAMILY SSF52402 2 276 1.23E-79 T 12-10-2018 Vc3S01_A0548 ddc86e60b2d42ed63a7382dc0e14e06a 276 Gene3D G3DSA:3.40.50.620 1 276 8.9E-82 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Vc3S01_A0548 ddc86e60b2d42ed63a7382dc0e14e06a 276 TIGRFAM TIGR00552 nadE: NAD+ synthetase 20 272 4.9E-64 T 12-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 Vc3S01_A0548 ddc86e60b2d42ed63a7382dc0e14e06a 276 Pfam PF02540 NAD synthase 21 270 1.3E-62 T 12-10-2018 IPR022310 NAD/GMP synthase Vc3S01_A0548 ddc86e60b2d42ed63a7382dc0e14e06a 276 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 16 274 45.985 T 12-10-2018 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 Vc3S01_A0490 72b2aef135aa588dc8e9196a3cf42c98 1171 Gene3D G3DSA:2.40.160.10 1004 1165 2.3E-5 T 12-10-2018 IPR023614 Porin domain superfamily Vc3S01_A0490 72b2aef135aa588dc8e9196a3cf42c98 1171 SUPERFAMILY SSF56935 865 1145 3.5E-8 T 12-10-2018 Vc3S01_A0424 45d327b413aa9b1e236afb25d5998dc2 315 Pfam PF13609 Gram-negative porin 7 298 1.3E-25 T 12-10-2018 Vc3S01_A0424 45d327b413aa9b1e236afb25d5998dc2 315 SUPERFAMILY SSF56935 23 315 1.54E-51 T 12-10-2018 Vc3S01_A0424 45d327b413aa9b1e236afb25d5998dc2 315 Gene3D G3DSA:2.40.160.10 22 315 2.2E-62 T 12-10-2018 IPR023614 Porin domain superfamily Vc3S01_0258 ffa4af1922746dc86b6f05537b57f388 211 SMART SM00671 72 107 0.0061 T 12-10-2018 IPR006597 Sel1-like repeat Vc3S01_0258 ffa4af1922746dc86b6f05537b57f388 211 SMART SM00671 144 179 22.0 T 12-10-2018 IPR006597 Sel1-like repeat Vc3S01_0258 ffa4af1922746dc86b6f05537b57f388 211 SMART SM00671 108 143 2.9E-6 T 12-10-2018 IPR006597 Sel1-like repeat Vc3S01_0258 ffa4af1922746dc86b6f05537b57f388 211 SUPERFAMILY SSF81901 64 177 1.96E-22 T 12-10-2018 Vc3S01_0258 ffa4af1922746dc86b6f05537b57f388 211 Gene3D G3DSA:1.25.40.10 33 211 1.1E-25 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_0258 ffa4af1922746dc86b6f05537b57f388 211 Pfam PF08238 Sel1 repeat 108 143 1.7E-5 T 12-10-2018 IPR006597 Sel1-like repeat Vc3S01_0258 ffa4af1922746dc86b6f05537b57f388 211 Pfam PF08238 Sel1 repeat 76 106 0.027 T 12-10-2018 IPR006597 Sel1-like repeat Vc3S01_A2032 c7839e2590c6cf8d5b4bec3dbf11e734 239 Gene3D G3DSA:3.30.450.20 9 128 3.6E-16 T 12-10-2018 Vc3S01_A2032 c7839e2590c6cf8d5b4bec3dbf11e734 239 Gene3D G3DSA:1.10.10.10 150 217 1.1E-13 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A2032 c7839e2590c6cf8d5b4bec3dbf11e734 239 SUPERFAMILY SSF55785 12 123 5.58E-14 T 12-10-2018 IPR035965 PAS domain superfamily Vc3S01_A2032 c7839e2590c6cf8d5b4bec3dbf11e734 239 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 189 3.9E-6 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_A2032 c7839e2590c6cf8d5b4bec3dbf11e734 239 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 189 201 3.9E-6 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_A2032 c7839e2590c6cf8d5b4bec3dbf11e734 239 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 173 3.9E-6 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_A2032 c7839e2590c6cf8d5b4bec3dbf11e734 239 Pfam PF00196 Bacterial regulatory proteins, luxR family 158 213 2.4E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_A2032 c7839e2590c6cf8d5b4bec3dbf11e734 239 Pfam PF08448 PAS fold 13 124 9.9E-26 T 12-10-2018 IPR013656 PAS fold-4 Vc3S01_A2032 c7839e2590c6cf8d5b4bec3dbf11e734 239 SUPERFAMILY SSF46894 150 218 2.82E-13 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Vc3S01_A2032 c7839e2590c6cf8d5b4bec3dbf11e734 239 SMART SM00421 156 213 1.1E-6 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_1987 1414a52bfd792f44f5529e823af5fcf5 198 SMART SM00448 6 117 9.8E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_1987 1414a52bfd792f44f5529e823af5fcf5 198 Gene3D G3DSA:1.10.10.10 132 194 8.4E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_1987 1414a52bfd792f44f5529e823af5fcf5 198 SUPERFAMILY SSF46894 134 193 3.74E-17 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Vc3S01_1987 1414a52bfd792f44f5529e823af5fcf5 198 Gene3D G3DSA:3.40.50.2300 3 131 4.3E-36 T 12-10-2018 Vc3S01_1987 1414a52bfd792f44f5529e823af5fcf5 198 SUPERFAMILY SSF52172 9 131 9.53E-31 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_1987 1414a52bfd792f44f5529e823af5fcf5 198 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 182 6.5E-13 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_1987 1414a52bfd792f44f5529e823af5fcf5 198 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 170 6.5E-13 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_1987 1414a52bfd792f44f5529e823af5fcf5 198 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 140 154 6.5E-13 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_1987 1414a52bfd792f44f5529e823af5fcf5 198 SMART SM00421 137 194 4.3E-20 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_1987 1414a52bfd792f44f5529e823af5fcf5 198 Pfam PF00072 Response regulator receiver domain 9 117 1.4E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_1987 1414a52bfd792f44f5529e823af5fcf5 198 Pfam PF00196 Bacterial regulatory proteins, luxR family 138 193 1.9E-18 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_1756 64c54952c2d599d1a8b1916d5e3b44d7 446 SUPERFAMILY SSF51905 9 424 5.61E-23 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_1756 64c54952c2d599d1a8b1916d5e3b44d7 446 Gene3D G3DSA:3.50.50.60 7 179 6.8E-17 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_1756 64c54952c2d599d1a8b1916d5e3b44d7 446 Pfam PF12831 FAD dependent oxidoreductase 11 442 3.8E-80 T 12-10-2018 IPR039649 Digeranylgeranylglycerophospholipid reductase, N-terminal Vc3S01_1066 72d33a614fea4f70244e8d8a6fbad739 321 Pfam PF04392 ABC transporter substrate binding protein 29 320 2.6E-113 T 12-10-2018 IPR007487 ABC transporter, substrate-binding protein Vc3S01_1066 72d33a614fea4f70244e8d8a6fbad739 321 Gene3D G3DSA:3.40.50.2300 143 314 9.4E-101 T 12-10-2018 Vc3S01_1066 72d33a614fea4f70244e8d8a6fbad739 321 SUPERFAMILY SSF53822 44 275 1.52E-17 T 12-10-2018 IPR028082 Periplasmic binding protein-like I Vc3S01_1066 72d33a614fea4f70244e8d8a6fbad739 321 Gene3D G3DSA:3.40.50.2300 46 292 9.4E-101 T 12-10-2018 Vc3S01_3150 f7d018bd57995dac283fb563710cd980 517 Gene3D G3DSA:3.10.105.10 279 494 1.7E-124 T 12-10-2018 Vc3S01_3150 f7d018bd57995dac283fb563710cd980 517 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 67 424 1.3E-85 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain Vc3S01_3150 f7d018bd57995dac283fb563710cd980 517 Gene3D G3DSA:3.90.76.10 57 165 1.7E-124 T 12-10-2018 Vc3S01_3150 f7d018bd57995dac283fb563710cd980 517 PIRSF PIRSF002741 21 512 4.8E-94 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Vc3S01_3150 f7d018bd57995dac283fb563710cd980 517 Gene3D G3DSA:3.40.190.10 32 278 1.7E-124 T 12-10-2018 Vc3S01_3150 f7d018bd57995dac283fb563710cd980 517 SUPERFAMILY SSF53850 26 516 1.71E-130 T 12-10-2018 Vc3S01_A0571 6ef52bd0086dbd180f78e3359d50eb84 304 Gene3D G3DSA:3.40.50.10190 201 301 6.4E-14 T 12-10-2018 IPR036420 BRCT domain superfamily Vc3S01_A0571 6ef52bd0086dbd180f78e3359d50eb84 304 SUPERFAMILY SSF52113 211 281 3.27E-7 T 12-10-2018 IPR036420 BRCT domain superfamily Vc3S01_0840 bd2fb810c916dc22c84cd7b3789233e0 475 ProSitePatterns PS00872 Sodium:galactoside symporter family signature. 59 84 - T 12-10-2018 IPR018043 Sodium:galactoside symporter, conserved site GO:0005215|GO:0006814|GO:0016020 Vc3S01_0840 bd2fb810c916dc22c84cd7b3789233e0 475 Pfam PF13347 MFS/sugar transport protein 10 437 4.3E-95 T 12-10-2018 Vc3S01_0840 bd2fb810c916dc22c84cd7b3789233e0 475 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 8 451 1.4E-164 T 12-10-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 Vc3S01_0840 bd2fb810c916dc22c84cd7b3789233e0 475 Gene3D G3DSA:1.20.1250.20 227 435 9.5E-6 T 12-10-2018 Vc3S01_0840 bd2fb810c916dc22c84cd7b3789233e0 475 Gene3D G3DSA:1.20.1250.20 9 207 4.1E-13 T 12-10-2018 Vc3S01_0840 bd2fb810c916dc22c84cd7b3789233e0 475 SUPERFAMILY SSF103473 10 444 7.19E-35 T 12-10-2018 IPR036259 MFS transporter superfamily Vc3S01_A0051 36118e29fca65848d7b07f395b806c9b 169 Pfam PF02814 UreE urease accessory protein, N-terminal domain 8 66 2.6E-14 T 12-10-2018 IPR004029 UreE urease accessory, N-terminal Vc3S01_A0051 36118e29fca65848d7b07f395b806c9b 169 Hamap MF_00822 Urease accessory protein UreE [ureE]. 2 145 20.902 T 12-10-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 Vc3S01_A0051 36118e29fca65848d7b07f395b806c9b 169 Pfam PF05194 UreE urease accessory protein, C-terminal domain 73 169 4.1E-21 T 12-10-2018 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0016151|GO:0019627|GO:0065003 Vc3S01_A0051 36118e29fca65848d7b07f395b806c9b 169 Gene3D G3DSA:2.60.260.20 1 72 2.3E-21 T 12-10-2018 Vc3S01_A0051 36118e29fca65848d7b07f395b806c9b 169 Gene3D G3DSA:3.30.70.790 73 148 1.8E-24 T 12-10-2018 IPR036675 UreE, C-terminal domain superfamily GO:0016151|GO:0019627|GO:0065003 Vc3S01_A0051 36118e29fca65848d7b07f395b806c9b 169 SUPERFAMILY SSF69737 73 144 5.75E-15 T 12-10-2018 IPR036675 UreE, C-terminal domain superfamily GO:0016151|GO:0019627|GO:0065003 Vc3S01_A0051 36118e29fca65848d7b07f395b806c9b 169 SUPERFAMILY SSF69287 1 71 1.03E-14 T 12-10-2018 IPR036118 UreE urease accessory, N-terminal domain superfamily Vc3S01_A0051 36118e29fca65848d7b07f395b806c9b 169 SMART SM00988 1 66 8.6E-19 T 12-10-2018 IPR004029 UreE urease accessory, N-terminal Vc3S01_A0051 36118e29fca65848d7b07f395b806c9b 169 PIRSF PIRSF036402 1 169 2.4E-33 T 12-10-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 Vc3S01_2703 1e49094da16b25a8d0709afc088f17f8 556 Pfam PF06580 Histidine kinase 366 444 1.6E-26 T 12-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 Vc3S01_2703 1e49094da16b25a8d0709afc088f17f8 556 Pfam PF13492 GAF domain 241 351 1.6E-6 T 12-10-2018 IPR003018 GAF domain GO:0005515 Vc3S01_2703 1e49094da16b25a8d0709afc088f17f8 556 Gene3D G3DSA:3.30.565.10 413 556 1.8E-13 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_2703 1e49094da16b25a8d0709afc088f17f8 556 SUPERFAMILY SSF55874 420 553 5.48E-12 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_2703 1e49094da16b25a8d0709afc088f17f8 556 Gene3D G3DSA:3.30.450.40 226 352 1.8E-7 T 12-10-2018 IPR029016 GAF-like domain superfamily Vc3S01_2703 1e49094da16b25a8d0709afc088f17f8 556 Pfam PF07694 5TMR of 5TMR-LYT 26 194 9.4E-60 T 12-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 Vc3S01_2703 1e49094da16b25a8d0709afc088f17f8 556 SUPERFAMILY SSF55781 226 351 3.36E-7 T 12-10-2018 Vc3S01_3154 f4b1567145cb3a3ed0706ca5f13adf9d 671 Gene3D G3DSA:1.10.10.160 108 181 2.3E-99 T 12-10-2018 IPR013986 DExx box DNA helicase domain superfamily Vc3S01_3154 f4b1567145cb3a3ed0706ca5f13adf9d 671 Pfam PF13361 UvrD-like helicase C-terminal domain 271 615 2.1E-73 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Vc3S01_3154 f4b1567145cb3a3ed0706ca5f13adf9d 671 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 265 1.5E-78 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 Vc3S01_3154 f4b1567145cb3a3ed0706ca5f13adf9d 671 Gene3D G3DSA:3.40.50.300 4 266 2.3E-99 T 12-10-2018 Vc3S01_3154 f4b1567145cb3a3ed0706ca5f13adf9d 671 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 670 40.813 T 12-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 Vc3S01_3154 f4b1567145cb3a3ed0706ca5f13adf9d 671 SUPERFAMILY SSF52540 1 640 5.93E-162 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_3154 f4b1567145cb3a3ed0706ca5f13adf9d 671 Gene3D G3DSA:1.10.486.10 377 546 3.9E-123 T 12-10-2018 Vc3S01_3154 f4b1567145cb3a3ed0706ca5f13adf9d 671 Gene3D G3DSA:3.40.50.300 274 634 3.9E-123 T 12-10-2018 Vc3S01_3154 f4b1567145cb3a3ed0706ca5f13adf9d 671 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 2 669 0.0 T 12-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 Vc3S01_A1853 7fe8a4f9ecac49c9a8da9fa50f7641e7 124 Pfam PF06803 Protein of unknown function (DUF1232) 63 98 7.2E-14 T 12-10-2018 IPR010652 Domain of unknown function DUF1232 MetaCyc: PWY-7511 Vc3S01_A1853 7fe8a4f9ecac49c9a8da9fa50f7641e7 124 PIRSF PIRSF031804 1 124 8.0E-41 T 12-10-2018 IPR016983 Uncharacterised conserved protein UCP031804 Vc3S01_1669 670548db98da653716c95c1a24609c48 286 SUPERFAMILY SSF161098 10 275 5.76E-54 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_1669 670548db98da653716c95c1a24609c48 286 Gene3D G3DSA:1.10.3720.10 7 278 1.3E-53 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_1669 670548db98da653716c95c1a24609c48 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 283 6.2E-20 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Vc3S01_2621 1fc01bf0865842b42d61cbb5036d683d 487 Pfam PF00571 CBS domain 95 140 2.6E-9 T 12-10-2018 IPR000644 CBS domain Vc3S01_2621 1fc01bf0865842b42d61cbb5036d683d 487 Pfam PF00571 CBS domain 149 201 9.9E-4 T 12-10-2018 IPR000644 CBS domain Vc3S01_2621 1fc01bf0865842b42d61cbb5036d683d 487 SUPERFAMILY SSF54631 95 203 1.11E-25 T 12-10-2018 Vc3S01_2621 1fc01bf0865842b42d61cbb5036d683d 487 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 12-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Vc3S01_2621 1fc01bf0865842b42d61cbb5036d683d 487 Gene3D G3DSA:3.20.20.70 1 486 7.9E-211 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_2621 1fc01bf0865842b42d61cbb5036d683d 487 SUPERFAMILY SSF51412 1 477 1.05E-125 T 12-10-2018 Vc3S01_2621 1fc01bf0865842b42d61cbb5036d683d 487 SMART SM00116 96 144 2.8E-11 T 12-10-2018 IPR000644 CBS domain Vc3S01_2621 1fc01bf0865842b42d61cbb5036d683d 487 SMART SM00116 158 206 1.1E-5 T 12-10-2018 IPR000644 CBS domain Vc3S01_2621 1fc01bf0865842b42d61cbb5036d683d 487 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 486 84.768 T 12-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 Vc3S01_2621 1fc01bf0865842b42d61cbb5036d683d 487 SMART SM01240 7 473 0.0 T 12-10-2018 Vc3S01_2621 1fc01bf0865842b42d61cbb5036d683d 487 PIRSF PIRSF000130 1 487 7.3E-201 T 12-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 Vc3S01_2621 1fc01bf0865842b42d61cbb5036d683d 487 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 454 1.7E-196 T 12-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 Vc3S01_2621 1fc01bf0865842b42d61cbb5036d683d 487 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 473 8.2E-162 T 12-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Vc3S01_0250 d8d7b58ed750bf4c6e4a4a938bec1c71 672 Gene3D G3DSA:3.30.565.10 1 216 4.8E-69 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_0250 d8d7b58ed750bf4c6e4a4a938bec1c71 672 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 212 329 2.9E-40 T 12-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 Vc3S01_0250 d8d7b58ed750bf4c6e4a4a938bec1c71 672 SMART SM01340 212 330 6.4E-60 T 12-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 Vc3S01_0250 d8d7b58ed750bf4c6e4a4a938bec1c71 672 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 119 1.5E-10 T 12-10-2018 Vc3S01_0250 d8d7b58ed750bf4c6e4a4a938bec1c71 672 Gene3D G3DSA:3.30.230.10 217 329 3.0E-40 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Vc3S01_0250 d8d7b58ed750bf4c6e4a4a938bec1c71 672 Pfam PF08676 MutL C terminal dimerisation domain 487 626 3.5E-29 T 12-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 Vc3S01_0250 d8d7b58ed750bf4c6e4a4a938bec1c71 672 SUPERFAMILY SSF54211 191 330 1.97E-38 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Vc3S01_0250 d8d7b58ed750bf4c6e4a4a938bec1c71 672 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 12-10-2018 IPR014762 DNA mismatch repair, conserved site Vc3S01_0250 d8d7b58ed750bf4c6e4a4a938bec1c71 672 SMART SM00853 489 632 4.5E-18 T 12-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 Vc3S01_0250 d8d7b58ed750bf4c6e4a4a938bec1c71 672 SUPERFAMILY SSF118116 487 669 4.58E-37 T 12-10-2018 IPR037198 MutL, C-terminal domain superfamily Vc3S01_0250 d8d7b58ed750bf4c6e4a4a938bec1c71 672 Gene3D G3DSA:3.30.1370.100 530 624 1.1E-54 T 12-10-2018 Vc3S01_0250 d8d7b58ed750bf4c6e4a4a938bec1c71 672 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 310 7.7E-102 T 12-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 Vc3S01_0250 d8d7b58ed750bf4c6e4a4a938bec1c71 672 SUPERFAMILY SSF55874 2 207 1.57E-51 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_0250 d8d7b58ed750bf4c6e4a4a938bec1c71 672 Gene3D G3DSA:2.30.42.20 487 668 1.1E-54 T 12-10-2018 Vc3S01_0250 d8d7b58ed750bf4c6e4a4a938bec1c71 672 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 670 25.118 T 12-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 Vc3S01_1269 9afd9a99a8e175267235cb0e0a0450c3 120 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 4 96 6.4E-33 T 12-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 Vc3S01_1269 9afd9a99a8e175267235cb0e0a0450c3 120 SUPERFAMILY SSF55620 1 118 5.56E-41 T 12-10-2018 Vc3S01_1269 9afd9a99a8e175267235cb0e0a0450c3 120 Gene3D G3DSA:3.30.479.10 1 120 8.5E-50 T 12-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 Vc3S01_1269 9afd9a99a8e175267235cb0e0a0450c3 120 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 5 120 2.1E-35 T 12-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 Vc3S01_1269 9afd9a99a8e175267235cb0e0a0450c3 120 PIRSF PIRSF006113 1 120 3.0E-53 T 12-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 Vc3S01_A1514 114c0f8d3832174ab775b993206c30f3 248 Hamap MF_01561 Probable phosphatase YcdX [ycdX]. 2 245 52.423 T 12-10-2018 IPR023710 Probable phosphatase YcdX GO:0008270 Vc3S01_A1514 114c0f8d3832174ab775b993206c30f3 248 SMART SM00481 5 79 1.5E-8 T 12-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal Vc3S01_A1514 114c0f8d3832174ab775b993206c30f3 248 Gene3D G3DSA:3.20.20.140 3 247 2.8E-66 T 12-10-2018 Vc3S01_A1514 114c0f8d3832174ab775b993206c30f3 248 SUPERFAMILY SSF89550 4 245 1.96E-62 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Vc3S01_2486 4a3e0d9897448c7fd7ed6c72b089b169 475 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 465 32.141 T 12-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Vc3S01_2486 4a3e0d9897448c7fd7ed6c72b089b169 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 182 192 1.4E-27 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Vc3S01_2486 4a3e0d9897448c7fd7ed6c72b089b169 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 1.4E-27 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Vc3S01_2486 4a3e0d9897448c7fd7ed6c72b089b169 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 1.4E-27 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Vc3S01_2486 4a3e0d9897448c7fd7ed6c72b089b169 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 1.4E-27 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Vc3S01_2486 4a3e0d9897448c7fd7ed6c72b089b169 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 198 206 1.4E-27 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Vc3S01_2486 4a3e0d9897448c7fd7ed6c72b089b169 475 SUPERFAMILY SSF52374 3 301 2.41E-109 T 12-10-2018 Vc3S01_2486 4a3e0d9897448c7fd7ed6c72b089b169 475 SUPERFAMILY SSF48163 302 465 1.31E-45 T 12-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Vc3S01_2486 4a3e0d9897448c7fd7ed6c72b089b169 475 Gene3D G3DSA:1.10.10.350 369 473 5.7E-24 T 12-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Vc3S01_2486 4a3e0d9897448c7fd7ed6c72b089b169 475 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Vc3S01_2486 4a3e0d9897448c7fd7ed6c72b089b169 475 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 469 4.8E-196 T 12-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Vc3S01_2486 4a3e0d9897448c7fd7ed6c72b089b169 475 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 308 1.0E-115 T 12-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 Vc3S01_2486 4a3e0d9897448c7fd7ed6c72b089b169 475 Gene3D G3DSA:3.40.50.620 2 317 2.0E-134 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Vc3S01_2655 1215e791038c559af540015302e509e2 542 Gene3D G3DSA:1.20.1220.12 421 542 1.4E-47 T 12-10-2018 Vc3S01_2655 1215e791038c559af540015302e509e2 542 ProSitePatterns PS00510 Malate synthase signature. 275 290 - T 12-10-2018 IPR019830 Malate synthase, conserved site GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 Vc3S01_2655 1215e791038c559af540015302e509e2 542 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 32 541 1.5E-263 T 12-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 Vc3S01_2655 1215e791038c559af540015302e509e2 542 SUPERFAMILY SSF51645 20 541 1.31E-186 T 12-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 Vc3S01_2655 1215e791038c559af540015302e509e2 542 PIRSF PIRSF001363 9 542 1.7E-251 T 12-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 Vc3S01_2655 1215e791038c559af540015302e509e2 542 Gene3D G3DSA:3.20.20.360 10 420 6.6E-191 T 12-10-2018 Vc3S01_2655 1215e791038c559af540015302e509e2 542 Pfam PF01274 Malate synthase 23 541 6.1E-202 T 12-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 Vc3S01_A0173 2685db142f065000b1a65a45632dd35c 478 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 76 6.6E-15 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Vc3S01_A0173 2685db142f065000b1a65a45632dd35c 478 SUPERFAMILY SSF53383 96 475 1.04E-77 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Vc3S01_A0173 2685db142f065000b1a65a45632dd35c 478 Pfam PF00155 Aminotransferase class I and II 136 458 9.9E-26 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Vc3S01_A0173 2685db142f065000b1a65a45632dd35c 478 Gene3D G3DSA:3.90.1150.10 117 471 4.7E-81 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Vc3S01_A0173 2685db142f065000b1a65a45632dd35c 478 Gene3D G3DSA:1.10.10.10 10 77 9.4E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A0173 2685db142f065000b1a65a45632dd35c 478 SUPERFAMILY SSF46785 11 80 4.57E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A0173 2685db142f065000b1a65a45632dd35c 478 SMART SM00345 17 76 2.8E-20 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Vc3S01_A0173 2685db142f065000b1a65a45632dd35c 478 Gene3D G3DSA:3.40.640.10 145 361 4.7E-81 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Vc3S01_2302 3156847c253888b1d21ee2a1341074e2 196 Pfam PF13305 WHG domain 93 172 6.5E-12 T 12-10-2018 IPR025996 WHG domain Vc3S01_2302 3156847c253888b1d21ee2a1341074e2 196 SUPERFAMILY SSF48498 82 195 1.68E-20 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Vc3S01_2302 3156847c253888b1d21ee2a1341074e2 196 Gene3D G3DSA:1.10.357.10 1 191 3.6E-41 T 12-10-2018 Vc3S01_2302 3156847c253888b1d21ee2a1341074e2 196 SUPERFAMILY SSF46689 6 77 3.4E-6 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_1656 1cd46c8f0ea2a7b524e428a26b5b97fe 324 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 37 83 4.3E-23 T 12-10-2018 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal Vc3S01_1656 1cd46c8f0ea2a7b524e428a26b5b97fe 324 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 113 321 1.3E-58 T 12-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III Vc3S01_1656 1cd46c8f0ea2a7b524e428a26b5b97fe 324 SUPERFAMILY SSF46626 238 321 3.1E-22 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Vc3S01_1656 1cd46c8f0ea2a7b524e428a26b5b97fe 324 Gene3D G3DSA:1.20.58.1490 1 94 1.5E-34 T 12-10-2018 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily Vc3S01_1656 1cd46c8f0ea2a7b524e428a26b5b97fe 324 Gene3D G3DSA:1.10.760.10 209 295 6.5E-74 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Vc3S01_1656 1cd46c8f0ea2a7b524e428a26b5b97fe 324 PIRSF PIRSF000006 1 322 2.3E-110 T 12-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III Vc3S01_1656 1cd46c8f0ea2a7b524e428a26b5b97fe 324 SUPERFAMILY SSF46626 55 238 5.16E-30 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Vc3S01_1656 1cd46c8f0ea2a7b524e428a26b5b97fe 324 PRINTS PR00605 Class IC cytochrome C signature 293 315 4.5E-6 T 12-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 Vc3S01_1656 1cd46c8f0ea2a7b524e428a26b5b97fe 324 PRINTS PR00605 Class IC cytochrome C signature 164 175 4.5E-6 T 12-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 Vc3S01_1656 1cd46c8f0ea2a7b524e428a26b5b97fe 324 Gene3D G3DSA:1.10.760.10 143 318 6.5E-74 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Vc3S01_1656 1cd46c8f0ea2a7b524e428a26b5b97fe 324 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 154 227 1.7E-13 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_1656 1cd46c8f0ea2a7b524e428a26b5b97fe 324 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 241 315 4.1E-11 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A0831 e47d4deb08045d0f8ad4ef9564ce059c 367 SUPERFAMILY SSF50331 236 358 6.07E-27 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Vc3S01_A0831 e47d4deb08045d0f8ad4ef9564ce059c 367 Gene3D G3DSA:3.40.50.300 3 221 2.5E-65 T 12-10-2018 Vc3S01_A0831 e47d4deb08045d0f8ad4ef9564ce059c 367 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_A0831 e47d4deb08045d0f8ad4ef9564ce059c 367 SMART SM00382 28 211 1.2E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_A0831 e47d4deb08045d0f8ad4ef9564ce059c 367 Gene3D G3DSA:2.40.50.940 222 352 2.2E-34 T 12-10-2018 Vc3S01_A0831 e47d4deb08045d0f8ad4ef9564ce059c 367 Gene3D G3DSA:2.40.50.140 288 343 2.2E-34 T 12-10-2018 Vc3S01_A0831 e47d4deb08045d0f8ad4ef9564ce059c 367 SUPERFAMILY SSF52540 4 243 5.61E-86 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A0831 e47d4deb08045d0f8ad4ef9564ce059c 367 Pfam PF00005 ABC transporter 20 161 8.1E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_2523 9341eaa3ab1c7371faa0429f224f72e7 145 SUPERFAMILY SSF75217 1 143 9.42E-47 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases Vc3S01_2523 9341eaa3ab1c7371faa0429f224f72e7 145 Pfam PF02590 Predicted SPOUT methyltransferase 2 143 2.9E-44 T 12-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 Vc3S01_2523 9341eaa3ab1c7371faa0429f224f72e7 145 PIRSF PIRSF004505 1 144 2.9E-40 T 12-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 Vc3S01_2523 9341eaa3ab1c7371faa0429f224f72e7 145 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 144 23.013 T 12-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 Vc3S01_2523 9341eaa3ab1c7371faa0429f224f72e7 145 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 1 145 3.2E-73 T 12-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 Vc3S01_2523 9341eaa3ab1c7371faa0429f224f72e7 145 Gene3D G3DSA:3.40.1280.10 1 145 1.3E-48 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Vc3S01_0233 36d12583bd9a0f969d66598c607c871d 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 4.1E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Vc3S01_0233 36d12583bd9a0f969d66598c607c871d 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 4.1E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Vc3S01_0233 36d12583bd9a0f969d66598c607c871d 211 Gene3D G3DSA:1.10.357.10 1 209 4.5E-65 T 12-10-2018 Vc3S01_0233 36d12583bd9a0f969d66598c607c871d 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 53 7.3E-13 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Vc3S01_0233 36d12583bd9a0f969d66598c607c871d 211 Pfam PF13972 Bacterial transcriptional repressor 57 199 2.4E-44 T 12-10-2018 IPR025722 Bacterial transcriptional repressor TetR Vc3S01_0233 36d12583bd9a0f969d66598c607c871d 211 SUPERFAMILY SSF46689 2 71 1.31E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_2822 8f5f1e211b952e7d9fbe4c313233bd58 160 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 5 129 6.7E-27 T 12-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Vc3S01_2822 8f5f1e211b952e7d9fbe4c313233bd58 160 Gene3D G3DSA:3.30.70.560 1 153 6.4E-32 T 12-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Vc3S01_2822 8f5f1e211b952e7d9fbe4c313233bd58 160 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 129 4.9E-23 T 12-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Vc3S01_2822 8f5f1e211b952e7d9fbe4c313233bd58 160 SUPERFAMILY SSF55083 1 149 2.62E-37 T 12-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Vc3S01_A0518 b5320bbc32d37ecfcc4ba8fe78a31dd1 205 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 73 1.6E-17 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Vc3S01_A0518 b5320bbc32d37ecfcc4ba8fe78a31dd1 205 Gene3D G3DSA:1.20.1050.10 84 198 1.3E-33 T 12-10-2018 Vc3S01_A0518 b5320bbc32d37ecfcc4ba8fe78a31dd1 205 Gene3D G3DSA:3.40.30.10 1 83 8.4E-34 T 12-10-2018 Vc3S01_A0518 b5320bbc32d37ecfcc4ba8fe78a31dd1 205 Pfam PF14497 Glutathione S-transferase, C-terminal domain 120 194 7.0E-8 T 12-10-2018 IPR004046 Glutathione S-transferase, C-terminal Vc3S01_A0518 b5320bbc32d37ecfcc4ba8fe78a31dd1 205 SUPERFAMILY SSF52833 1 77 8.47E-20 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Vc3S01_A0518 b5320bbc32d37ecfcc4ba8fe78a31dd1 205 SUPERFAMILY SSF47616 81 199 2.23E-20 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Vc3S01_0023 65933a9dfc4a00056d09940985929064 540 PRINTS PR00701 60kDa inner membrane protein signature 214 232 2.3E-99 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Vc3S01_0023 65933a9dfc4a00056d09940985929064 540 PRINTS PR00701 60kDa inner membrane protein signature 321 341 2.3E-99 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Vc3S01_0023 65933a9dfc4a00056d09940985929064 540 PRINTS PR00701 60kDa inner membrane protein signature 412 435 2.3E-99 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Vc3S01_0023 65933a9dfc4a00056d09940985929064 540 PRINTS PR00701 60kDa inner membrane protein signature 161 181 2.3E-99 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Vc3S01_0023 65933a9dfc4a00056d09940985929064 540 PRINTS PR00701 60kDa inner membrane protein signature 2 23 2.3E-99 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Vc3S01_0023 65933a9dfc4a00056d09940985929064 540 PRINTS PR00701 60kDa inner membrane protein signature 496 519 2.3E-99 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Vc3S01_0023 65933a9dfc4a00056d09940985929064 540 PRINTS PR00701 60kDa inner membrane protein signature 249 264 2.3E-99 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Vc3S01_0023 65933a9dfc4a00056d09940985929064 540 PRINTS PR00701 60kDa inner membrane protein signature 459 481 2.3E-99 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Vc3S01_0023 65933a9dfc4a00056d09940985929064 540 PRINTS PR00701 60kDa inner membrane protein signature 71 92 2.3E-99 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Vc3S01_0023 65933a9dfc4a00056d09940985929064 540 PRINTS PR01900 YidC translocation/secretion protein signature 465 480 1.8E-26 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Vc3S01_0023 65933a9dfc4a00056d09940985929064 540 PRINTS PR01900 YidC translocation/secretion protein signature 336 352 1.8E-26 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Vc3S01_0023 65933a9dfc4a00056d09940985929064 540 PRINTS PR01900 YidC translocation/secretion protein signature 485 509 1.8E-26 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Vc3S01_0023 65933a9dfc4a00056d09940985929064 540 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 532 25.964 T 12-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 Vc3S01_0023 65933a9dfc4a00056d09940985929064 540 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 350 529 8.5E-74 T 12-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_0023 65933a9dfc4a00056d09940985929064 540 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 349 7.7E-112 T 12-10-2018 IPR028053 Membrane insertase YidC, N-terminal Vc3S01_0023 65933a9dfc4a00056d09940985929064 540 Pfam PF14849 YidC periplasmic domain 65 339 1.9E-83 T 12-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain Vc3S01_0023 65933a9dfc4a00056d09940985929064 540 Gene3D G3DSA:2.70.98.90 61 330 9.4E-90 T 12-10-2018 IPR038221 YidC, periplasmic domain superfamily Vc3S01_0023 65933a9dfc4a00056d09940985929064 540 Pfam PF02096 60Kd inner membrane protein 351 530 9.6E-64 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Vc3S01_0156 1687697d4ef85ae8bb0659ba67738f4e 182 Pfam PF00467 KOW motif 131 162 4.8E-7 T 12-10-2018 IPR005824 KOW Vc3S01_0156 1687697d4ef85ae8bb0659ba67738f4e 182 Pfam PF02357 Transcription termination factor nusG 7 112 2.0E-26 T 12-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Vc3S01_0156 1687697d4ef85ae8bb0659ba67738f4e 182 Gene3D G3DSA:2.30.30.30 123 181 3.0E-25 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 Vc3S01_0156 1687697d4ef85ae8bb0659ba67738f4e 182 SMART SM00738 6 115 2.2E-49 T 12-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Vc3S01_0156 1687697d4ef85ae8bb0659ba67738f4e 182 PRINTS PR00338 Transcription termination factor NUSG signature 139 154 6.8E-22 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Vc3S01_0156 1687697d4ef85ae8bb0659ba67738f4e 182 PRINTS PR00338 Transcription termination factor NUSG signature 157 173 6.8E-22 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Vc3S01_0156 1687697d4ef85ae8bb0659ba67738f4e 182 PRINTS PR00338 Transcription termination factor NUSG signature 61 73 6.8E-22 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Vc3S01_0156 1687697d4ef85ae8bb0659ba67738f4e 182 SUPERFAMILY SSF82679 6 116 1.1E-39 T 12-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Vc3S01_0156 1687697d4ef85ae8bb0659ba67738f4e 182 SUPERFAMILY SSF50104 126 181 3.31E-19 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily Vc3S01_0156 1687697d4ef85ae8bb0659ba67738f4e 182 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 6 181 25.574 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Vc3S01_0156 1687697d4ef85ae8bb0659ba67738f4e 182 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 9 181 3.3E-70 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Vc3S01_0156 1687697d4ef85ae8bb0659ba67738f4e 182 Gene3D G3DSA:3.30.70.940 1 122 6.3E-47 T 12-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Vc3S01_0156 1687697d4ef85ae8bb0659ba67738f4e 182 SMART SM00739 127 154 3.9E-4 T 12-10-2018 IPR005824 KOW Vc3S01_0156 1687697d4ef85ae8bb0659ba67738f4e 182 ProSitePatterns PS01014 Transcription termination factor nusG signature. 164 173 - T 12-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site Vc3S01_1218 0037a4a07de3f45956d35f3e8eb11a5d 417 Gene3D G3DSA:3.30.360.10 159 355 3.8E-144 T 12-10-2018 Vc3S01_1218 0037a4a07de3f45956d35f3e8eb11a5d 417 SUPERFAMILY SSF51735 2 179 7.64E-16 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_1218 0037a4a07de3f45956d35f3e8eb11a5d 417 Gene3D G3DSA:3.40.50.720 4 398 3.8E-144 T 12-10-2018 Vc3S01_1218 0037a4a07de3f45956d35f3e8eb11a5d 417 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 149 392 8.8E-30 T 12-10-2018 IPR032095 Saccharopine dehydrogenase, C-terminal Reactome: R-HSA-71064 Vc3S01_1218 0037a4a07de3f45956d35f3e8eb11a5d 417 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 3 144 1.8E-32 T 12-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 Vc3S01_A1140 ebeb37d4763c3bbf82fab9e8e4236b73 567 Pfam PF00581 Rhodanese-like domain 482 563 6.5E-10 T 12-10-2018 IPR001763 Rhodanese-like domain Vc3S01_A1140 ebeb37d4763c3bbf82fab9e8e4236b73 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 257 271 7.0E-21 T 12-10-2018 Vc3S01_A1140 ebeb37d4763c3bbf82fab9e8e4236b73 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 7.0E-21 T 12-10-2018 Vc3S01_A1140 ebeb37d4763c3bbf82fab9e8e4236b73 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 153 178 7.0E-21 T 12-10-2018 Vc3S01_A1140 ebeb37d4763c3bbf82fab9e8e4236b73 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 7.0E-21 T 12-10-2018 Vc3S01_A1140 ebeb37d4763c3bbf82fab9e8e4236b73 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 7.0E-21 T 12-10-2018 Vc3S01_A1140 ebeb37d4763c3bbf82fab9e8e4236b73 567 SUPERFAMILY SSF52821 459 563 3.8E-24 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily Vc3S01_A1140 ebeb37d4763c3bbf82fab9e8e4236b73 567 SUPERFAMILY SSF55424 344 467 1.89E-35 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Vc3S01_A1140 ebeb37d4763c3bbf82fab9e8e4236b73 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 2.8E-23 T 12-10-2018 Vc3S01_A1140 ebeb37d4763c3bbf82fab9e8e4236b73 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 2.8E-23 T 12-10-2018 Vc3S01_A1140 ebeb37d4763c3bbf82fab9e8e4236b73 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 153 171 2.8E-23 T 12-10-2018 Vc3S01_A1140 ebeb37d4763c3bbf82fab9e8e4236b73 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 2.8E-23 T 12-10-2018 Vc3S01_A1140 ebeb37d4763c3bbf82fab9e8e4236b73 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 256 272 2.8E-23 T 12-10-2018 Vc3S01_A1140 ebeb37d4763c3bbf82fab9e8e4236b73 567 Gene3D G3DSA:3.40.250.10 471 565 3.0E-25 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily Vc3S01_A1140 ebeb37d4763c3bbf82fab9e8e4236b73 567 SUPERFAMILY SSF51905 155 340 1.81E-29 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_A1140 ebeb37d4763c3bbf82fab9e8e4236b73 567 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 350 451 8.0E-17 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Vc3S01_A1140 ebeb37d4763c3bbf82fab9e8e4236b73 567 SUPERFAMILY SSF51905 2 197 1.98E-40 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_A1140 ebeb37d4763c3bbf82fab9e8e4236b73 567 Gene3D G3DSA:3.50.50.60 3 361 2.8E-190 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_A1140 ebeb37d4763c3bbf82fab9e8e4236b73 567 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 328 4.7E-55 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Vc3S01_A1140 ebeb37d4763c3bbf82fab9e8e4236b73 567 Gene3D G3DSA:3.50.50.60 115 461 2.8E-190 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_A1140 ebeb37d4763c3bbf82fab9e8e4236b73 567 SMART SM00450 473 567 1.4E-14 T 12-10-2018 IPR001763 Rhodanese-like domain Vc3S01_2562 4cd88f7856fe2ca06832520508984602 167 PIRSF PIRSF006162 6 166 1.0E-54 T 12-10-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 Vc3S01_2562 4cd88f7856fe2ca06832520508984602 167 SUPERFAMILY SSF101307 9 161 4.97E-50 T 12-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 Vc3S01_2562 4cd88f7856fe2ca06832520508984602 167 Pfam PF04608 Phosphatidylglycerophosphatase A 15 159 1.5E-53 T 12-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 Vc3S01_2893 a2ec5332b9753cd95b3ee45c5b58a2d0 511 Pfam PF17243 POTRA domain TamA domain 1 2 36 7.3E-7 T 12-10-2018 IPR035243 TamA, POTRA domain 1 Vc3S01_2893 a2ec5332b9753cd95b3ee45c5b58a2d0 511 Pfam PF01103 Surface antigen 216 508 1.2E-30 T 12-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 Vc3S01_2893 a2ec5332b9753cd95b3ee45c5b58a2d0 511 Gene3D G3DSA:2.40.160.50 203 511 4.2E-98 T 12-10-2018 Vc3S01_2893 a2ec5332b9753cd95b3ee45c5b58a2d0 511 Gene3D G3DSA:3.10.20.310 1 37 5.5E-6 T 12-10-2018 Vc3S01_2893 a2ec5332b9753cd95b3ee45c5b58a2d0 511 Gene3D G3DSA:3.10.20.310 126 202 9.7E-18 T 12-10-2018 Vc3S01_2893 a2ec5332b9753cd95b3ee45c5b58a2d0 511 Gene3D G3DSA:3.10.20.310 38 125 2.4E-29 T 12-10-2018 Vc3S01_2893 a2ec5332b9753cd95b3ee45c5b58a2d0 511 Pfam PF07244 Surface antigen variable number repeat 46 118 4.5E-7 T 12-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 Vc3S01_1427 d35a5457edb0697480df97971ba60561 291 SUPERFAMILY SSF46785 4 84 5.78E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_1427 d35a5457edb0697480df97971ba60561 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 8.6E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_1427 d35a5457edb0697480df97971ba60561 291 Gene3D G3DSA:1.10.10.10 3 90 4.2E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_1427 d35a5457edb0697480df97971ba60561 291 Pfam PF03466 LysR substrate binding domain 89 289 3.0E-39 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_1427 d35a5457edb0697480df97971ba60561 291 SUPERFAMILY SSF53850 89 290 1.01E-38 T 12-10-2018 Vc3S01_1427 d35a5457edb0697480df97971ba60561 291 Gene3D G3DSA:3.40.190.290 91 289 3.8E-59 T 12-10-2018 Vc3S01_1252 f3c66787dac7d83ecd90cee30646246e 212 SMART SM00448 5 118 3.5E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_1252 f3c66787dac7d83ecd90cee30646246e 212 Pfam PF00072 Response regulator receiver domain 7 119 1.4E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_1252 f3c66787dac7d83ecd90cee30646246e 212 SUPERFAMILY SSF46894 140 211 2.65E-20 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Vc3S01_1252 f3c66787dac7d83ecd90cee30646246e 212 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_1252 f3c66787dac7d83ecd90cee30646246e 212 Gene3D G3DSA:3.40.50.12740 5 211 6.7E-65 T 12-10-2018 Vc3S01_1252 f3c66787dac7d83ecd90cee30646246e 212 SMART SM00421 148 205 2.8E-22 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_1252 f3c66787dac7d83ecd90cee30646246e 212 SUPERFAMILY SSF52172 4 135 7.83E-34 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_1252 f3c66787dac7d83ecd90cee30646246e 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 4.7E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_1252 f3c66787dac7d83ecd90cee30646246e 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 4.7E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_1252 f3c66787dac7d83ecd90cee30646246e 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 4.7E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_1252 f3c66787dac7d83ecd90cee30646246e 212 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 205 1.1E-18 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_A0105 a5feb8b91c762b188b3cc56e0782ff83 324 Gene3D G3DSA:1.10.3720.10 88 316 1.5E-16 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_A0105 a5feb8b91c762b188b3cc56e0782ff83 324 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 323 5.2E-35 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Vc3S01_A0105 a5feb8b91c762b188b3cc56e0782ff83 324 SUPERFAMILY SSF161098 94 311 4.91E-14 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_2926 373e78b454ba8d0fb118e3d8020ad1d1 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 25.541 T 12-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_2926 373e78b454ba8d0fb118e3d8020ad1d1 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 8.5E-44 T 12-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_2926 373e78b454ba8d0fb118e3d8020ad1d1 117 Gene3D G3DSA:3.30.420.100 1 117 7.8E-44 T 12-10-2018 Vc3S01_2926 373e78b454ba8d0fb118e3d8020ad1d1 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 8.8E-43 T 12-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_2926 373e78b454ba8d0fb118e3d8020ad1d1 117 SUPERFAMILY SSF53137 3 115 6.54E-51 T 12-10-2018 Vc3S01_0792 0719081ba3358d6f4467b10389d4f0f7 262 Gene3D G3DSA:1.20.1180.10 197 262 9.4E-22 T 12-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 Vc3S01_0792 0719081ba3358d6f4467b10389d4f0f7 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 36 69 3.5E-5 T 12-10-2018 IPR001451 Hexapeptide repeat Vc3S01_0792 0719081ba3358d6f4467b10389d4f0f7 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 2 33 2.4E-6 T 12-10-2018 IPR001451 Hexapeptide repeat Vc3S01_0792 0719081ba3358d6f4467b10389d4f0f7 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 3.4E-7 T 12-10-2018 IPR001451 Hexapeptide repeat Vc3S01_0792 0719081ba3358d6f4467b10389d4f0f7 262 SUPERFAMILY SSF51161 1 262 1.28E-73 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily Vc3S01_0792 0719081ba3358d6f4467b10389d4f0f7 262 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 180 261 6.6E-25 T 12-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 Vc3S01_0792 0719081ba3358d6f4467b10389d4f0f7 262 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 8 260 3.3E-95 T 12-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 Vc3S01_0792 0719081ba3358d6f4467b10389d4f0f7 262 PIRSF PIRSF000456 4 262 9.8E-96 T 12-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 Vc3S01_0792 0719081ba3358d6f4467b10389d4f0f7 262 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 5 262 42.755 T 12-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 Vc3S01_0792 0719081ba3358d6f4467b10389d4f0f7 262 Gene3D G3DSA:2.160.10.10 1 196 3.0E-50 T 12-10-2018 Vc3S01_0225 b81bf1a0f07032cef8113e9280b68ef6 467 Pfam PF01145 SPFH domain / Band 7 family 45 296 1.3E-38 T 12-10-2018 IPR001107 Band 7 domain Vc3S01_2767 6bd75e24a41529f927850de761762406 379 Gene3D G3DSA:3.50.30.20 3 151 3.5E-62 T 12-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Vc3S01_2767 6bd75e24a41529f927850de761762406 379 PRINTS PR00097 Anthranilate synthase component II signature 349 362 1.2E-5 T 12-10-2018 Vc3S01_2767 6bd75e24a41529f927850de761762406 379 PRINTS PR00097 Anthranilate synthase component II signature 264 275 1.2E-5 T 12-10-2018 Vc3S01_2767 6bd75e24a41529f927850de761762406 379 PRINTS PR00097 Anthranilate synthase component II signature 236 245 1.2E-5 T 12-10-2018 Vc3S01_2767 6bd75e24a41529f927850de761762406 379 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 378 48.852 T 12-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Vc3S01_2767 6bd75e24a41529f927850de761762406 379 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 4.8E-53 T 12-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Vc3S01_2767 6bd75e24a41529f927850de761762406 379 Gene3D G3DSA:3.40.50.880 152 378 1.8E-76 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Vc3S01_2767 6bd75e24a41529f927850de761762406 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 236 245 3.9E-11 T 12-10-2018 Vc3S01_2767 6bd75e24a41529f927850de761762406 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 264 275 3.9E-11 T 12-10-2018 Vc3S01_2767 6bd75e24a41529f927850de761762406 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 349 362 3.9E-11 T 12-10-2018 Vc3S01_2767 6bd75e24a41529f927850de761762406 379 Pfam PF00117 Glutamine amidotransferase class-I 197 372 3.1E-47 T 12-10-2018 IPR017926 Glutamine amidotransferase Vc3S01_2767 6bd75e24a41529f927850de761762406 379 SUPERFAMILY SSF52317 153 377 3.25E-63 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Vc3S01_2767 6bd75e24a41529f927850de761762406 379 SUPERFAMILY SSF52021 5 142 6.8E-58 T 12-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Vc3S01_2767 6bd75e24a41529f927850de761762406 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 281 298 1.4E-39 T 12-10-2018 Vc3S01_2767 6bd75e24a41529f927850de761762406 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 306 317 1.4E-39 T 12-10-2018 Vc3S01_2767 6bd75e24a41529f927850de761762406 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 264 280 1.4E-39 T 12-10-2018 Vc3S01_2767 6bd75e24a41529f927850de761762406 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 233 247 1.4E-39 T 12-10-2018 Vc3S01_2767 6bd75e24a41529f927850de761762406 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 194 208 1.4E-39 T 12-10-2018 Vc3S01_2767 6bd75e24a41529f927850de761762406 379 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 376 2.8E-150 T 12-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Vc3S01_2767 6bd75e24a41529f927850de761762406 379 SMART SM01097 3 133 2.4E-93 T 12-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Vc3S01_1697 3af7e62dc36c285b50cd33a48cd95ae2 592 Pfam PF00994 Probable molybdopterin binding domain 366 503 1.8E-25 T 12-10-2018 IPR001453 MoaB/Mog domain Vc3S01_1697 3af7e62dc36c285b50cd33a48cd95ae2 592 SUPERFAMILY SSF53218 363 508 2.09E-43 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily Vc3S01_1697 3af7e62dc36c285b50cd33a48cd95ae2 592 Pfam PF03453 MoeA N-terminal region (domain I and II) 194 353 8.1E-38 T 12-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Vc3S01_1697 3af7e62dc36c285b50cd33a48cd95ae2 592 SUPERFAMILY SSF63867 512 590 2.49E-23 T 12-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Vc3S01_1697 3af7e62dc36c285b50cd33a48cd95ae2 592 Gene3D G3DSA:3.40.50.300 10 165 7.9E-56 T 12-10-2018 Vc3S01_1697 3af7e62dc36c285b50cd33a48cd95ae2 592 Gene3D G3DSA:3.90.105.10 212 360 9.1E-135 T 12-10-2018 Vc3S01_1697 3af7e62dc36c285b50cd33a48cd95ae2 592 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 9 167 1.4E-42 T 12-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 Vc3S01_1697 3af7e62dc36c285b50cd33a48cd95ae2 592 Gene3D G3DSA:3.40.980.10 211 512 9.1E-135 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily Vc3S01_1697 3af7e62dc36c285b50cd33a48cd95ae2 592 PIRSF PIRSF036618 1 592 0.0 T 12-10-2018 IPR012182 Bifunctional molybdenum cofactor biosynthesis MobB/MoeA Vc3S01_1697 3af7e62dc36c285b50cd33a48cd95ae2 592 Gene3D G3DSA:2.40.340.10 513 583 9.1E-135 T 12-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Vc3S01_1697 3af7e62dc36c285b50cd33a48cd95ae2 592 Gene3D G3DSA:2.170.190.11 236 327 9.1E-135 T 12-10-2018 Vc3S01_1697 3af7e62dc36c285b50cd33a48cd95ae2 592 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 439 472 - T 12-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 Vc3S01_1697 3af7e62dc36c285b50cd33a48cd95ae2 592 SMART SM00852 366 503 7.5E-40 T 12-10-2018 IPR001453 MoaB/Mog domain Vc3S01_1697 3af7e62dc36c285b50cd33a48cd95ae2 592 Pfam PF03454 MoeA C-terminal region (domain IV) 517 588 7.1E-21 T 12-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Vc3S01_1697 3af7e62dc36c285b50cd33a48cd95ae2 592 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 362 499 1.4E-31 T 12-10-2018 IPR001453 MoaB/Mog domain Vc3S01_1697 3af7e62dc36c285b50cd33a48cd95ae2 592 Gene3D G3DSA:2.20.25.120 53 85 7.9E-56 T 12-10-2018 Vc3S01_1697 3af7e62dc36c285b50cd33a48cd95ae2 592 SUPERFAMILY SSF63882 192 362 1.11E-46 T 12-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Vc3S01_1697 3af7e62dc36c285b50cd33a48cd95ae2 592 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 9 142 1.6E-47 T 12-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 Vc3S01_1697 3af7e62dc36c285b50cd33a48cd95ae2 592 SUPERFAMILY SSF52540 7 169 1.26E-25 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_1445 99c896323f4bad5fd1ecae185566f768 374 Gene3D G3DSA:2.40.50.140 295 352 3.7E-32 T 12-10-2018 Vc3S01_1445 99c896323f4bad5fd1ecae185566f768 374 SUPERFAMILY SSF50331 242 368 4.37E-24 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Vc3S01_1445 99c896323f4bad5fd1ecae185566f768 374 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_1445 99c896323f4bad5fd1ecae185566f768 374 Gene3D G3DSA:3.40.50.300 3 227 4.8E-61 T 12-10-2018 Vc3S01_1445 99c896323f4bad5fd1ecae185566f768 374 Gene3D G3DSA:2.40.50.940 228 361 3.7E-32 T 12-10-2018 Vc3S01_1445 99c896323f4bad5fd1ecae185566f768 374 Pfam PF00005 ABC transporter 21 162 2.0E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_1445 99c896323f4bad5fd1ecae185566f768 374 SMART SM00382 29 217 1.7E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_1445 99c896323f4bad5fd1ecae185566f768 374 Pfam PF08402 TOBE domain 288 360 2.9E-10 T 12-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Vc3S01_1445 99c896323f4bad5fd1ecae185566f768 374 SUPERFAMILY SSF52540 4 248 1.1E-81 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_1184 a325c3078caaddc8023c3420b132f4d6 787 SMART SM00729 367 617 2.0E-4 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Vc3S01_1184 a325c3078caaddc8023c3420b132f4d6 787 Pfam PF08497 Radical SAM N-terminal 24 370 1.2E-141 T 12-10-2018 IPR013704 Uncharacterised protein family UPF0313, N-terminal Vc3S01_1184 a325c3078caaddc8023c3420b132f4d6 787 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 24 638 48.822 T 12-10-2018 IPR022946 Uncharacterised protein family UPF0313 Vc3S01_1184 a325c3078caaddc8023c3420b132f4d6 787 Pfam PF04055 Radical SAM superfamily 371 576 9.5E-20 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Vc3S01_1184 a325c3078caaddc8023c3420b132f4d6 787 Gene3D G3DSA:3.80.30.20 366 626 7.2E-13 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Vc3S01_1184 a325c3078caaddc8023c3420b132f4d6 787 Pfam PF11842 Domain of unknown function (DUF3362) 585 739 4.6E-41 T 12-10-2018 IPR024560 Uncharacterised protein family UPF0313, C-terminal Vc3S01_1184 a325c3078caaddc8023c3420b132f4d6 787 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 371 391 - T 12-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 Vc3S01_1184 a325c3078caaddc8023c3420b132f4d6 787 SUPERFAMILY SSF102114 370 605 6.67E-11 T 12-10-2018 Vc3S01_1184 a325c3078caaddc8023c3420b132f4d6 787 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 24 636 5.6E-261 T 12-10-2018 IPR022946 Uncharacterised protein family UPF0313 Vc3S01_A0745 2432d48055b7315a70737e6053d03bc6 152 PIRSF PIRSF006019 1 148 4.0E-44 T 12-10-2018 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210|Reactome: R-HSA-499943 Vc3S01_A0745 2432d48055b7315a70737e6053d03bc6 152 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 4 109 1.1E-25 T 12-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain Vc3S01_A0745 2432d48055b7315a70737e6053d03bc6 152 Gene3D G3DSA:3.40.140.10 2 151 8.5E-41 T 12-10-2018 Vc3S01_A0745 2432d48055b7315a70737e6053d03bc6 152 SUPERFAMILY SSF53927 8 146 6.02E-32 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Vc3S01_A0745 2432d48055b7315a70737e6053d03bc6 152 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 67 99 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 Vc3S01_A0533 11fd3a1094c88a0fb7f68132d875498a 451 Pfam PF00563 EAL domain 204 438 5.0E-68 T 12-10-2018 IPR001633 EAL domain Vc3S01_A0533 11fd3a1094c88a0fb7f68132d875498a 451 SUPERFAMILY SSF141868 203 450 6.41E-81 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_A0533 11fd3a1094c88a0fb7f68132d875498a 451 Gene3D G3DSA:3.20.20.450 198 451 1.1E-86 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_A0533 11fd3a1094c88a0fb7f68132d875498a 451 SMART SM00052 198 443 8.1E-96 T 12-10-2018 IPR001633 EAL domain Vc3S01_A0533 11fd3a1094c88a0fb7f68132d875498a 451 Pfam PF12792 CSS motif domain associated with EAL 2 172 1.4E-17 T 12-10-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain Vc3S01_p20155 11a14165b9f48e49cb97408b9e6b17f1 271 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 41 54 - T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Vc3S01_p20155 11a14165b9f48e49cb97408b9e6b17f1 271 Pfam PF00809 Pterin binding enzyme 8 249 3.6E-71 T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Vc3S01_p20155 11a14165b9f48e49cb97408b9e6b17f1 271 SUPERFAMILY SSF51717 3 266 2.22E-72 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Vc3S01_p20155 11a14165b9f48e49cb97408b9e6b17f1 271 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 7 22 - T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Vc3S01_p20155 11a14165b9f48e49cb97408b9e6b17f1 271 Gene3D G3DSA:3.20.20.20 1 270 1.5E-75 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Vc3S01_p20155 11a14165b9f48e49cb97408b9e6b17f1 271 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 7 263 7.8E-75 T 12-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 Vc3S01_0692 26c286527df1214d8c2b7c8af1c88c84 632 SUPERFAMILY SSF56601 255 621 7.38E-92 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Vc3S01_0692 26c286527df1214d8c2b7c8af1c88c84 632 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 21 621 8.1E-227 T 12-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Vc3S01_0692 26c286527df1214d8c2b7c8af1c88c84 632 Gene3D G3DSA:3.30.1390.30 86 161 2.1E-50 T 12-10-2018 Vc3S01_0692 26c286527df1214d8c2b7c8af1c88c84 632 Gene3D G3DSA:3.40.710.10 250 630 2.8E-90 T 12-10-2018 Vc3S01_0692 26c286527df1214d8c2b7c8af1c88c84 632 SUPERFAMILY SSF56519 57 253 5.1E-55 T 12-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 Vc3S01_0692 26c286527df1214d8c2b7c8af1c88c84 632 Pfam PF03717 Penicillin-binding Protein dimerisation domain 65 240 1.5E-47 T 12-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 Vc3S01_0692 26c286527df1214d8c2b7c8af1c88c84 632 Hamap MF_02081 Peptidoglycan D,D-transpeptidase MrdA [mrdA]. 4 625 49.384 T 12-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Vc3S01_0692 26c286527df1214d8c2b7c8af1c88c84 632 Pfam PF00905 Penicillin binding protein transpeptidase domain 272 617 3.0E-71 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Vc3S01_0692 26c286527df1214d8c2b7c8af1c88c84 632 Gene3D G3DSA:3.90.1310.10 65 249 2.1E-50 T 12-10-2018 Vc3S01_2048 1ccda1260d1f240a14cd34f3f81ac947 257 Pfam PF00977 Histidine biosynthesis protein 5 239 2.3E-79 T 12-10-2018 IPR006062 Histidine biosynthesis GO:0000105 Vc3S01_2048 1ccda1260d1f240a14cd34f3f81ac947 257 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 44.983 T 12-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 Vc3S01_2048 1ccda1260d1f240a14cd34f3f81ac947 257 SUPERFAMILY SSF51366 1 256 1.33E-74 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Vc3S01_2048 1ccda1260d1f240a14cd34f3f81ac947 257 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 6.7E-115 T 12-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 Vc3S01_2048 1ccda1260d1f240a14cd34f3f81ac947 257 Gene3D G3DSA:3.20.20.70 1 257 2.2E-95 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_0325 528f9c1c49b581a30292fe03e9f522d3 223 SUPERFAMILY SSF51366 4 218 2.41E-78 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Vc3S01_0325 528f9c1c49b581a30292fe03e9f522d3 223 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Vc3S01_0325 528f9c1c49b581a30292fe03e9f522d3 223 PIRSF PIRSF001461 1 223 2.6E-107 T 12-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Vc3S01_0325 528f9c1c49b581a30292fe03e9f522d3 223 Gene3D G3DSA:3.20.20.70 5 221 5.6E-87 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_0325 528f9c1c49b581a30292fe03e9f522d3 223 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 1.7E-100 T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Vc3S01_0325 528f9c1c49b581a30292fe03e9f522d3 223 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Vc3S01_0325 528f9c1c49b581a30292fe03e9f522d3 223 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 1.7E-92 T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Vc3S01_0327 172c44b6db02fe4c0a08641ec7d7996e 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 73 9.0E-24 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_0327 172c44b6db02fe4c0a08641ec7d7996e 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 73 6.2E-38 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_0327 172c44b6db02fe4c0a08641ec7d7996e 75 Pfam PF01084 Ribosomal protein S18 19 68 2.8E-25 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_0327 172c44b6db02fe4c0a08641ec7d7996e 75 Gene3D G3DSA:4.10.640.10 20 75 7.8E-29 T 12-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_0327 172c44b6db02fe4c0a08641ec7d7996e 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 12-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_0327 172c44b6db02fe4c0a08641ec7d7996e 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 21.42 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_0327 172c44b6db02fe4c0a08641ec7d7996e 75 SUPERFAMILY SSF46911 3 74 2.49E-29 T 12-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_0327 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 1.6E-18 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_0327 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 1.6E-18 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_0327 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 1.6E-18 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_0327 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 1.6E-18 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_0624 f8134cdc46efbfac44bae1af3ca45592 661 Gene3D G3DSA:2.40.50.920 27 103 3.5E-29 T 12-10-2018 Vc3S01_0624 f8134cdc46efbfac44bae1af3ca45592 661 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 105 597 7.2E-243 T 12-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 Vc3S01_0624 f8134cdc46efbfac44bae1af3ca45592 661 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 6 620 37.317 T 12-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 Vc3S01_0624 f8134cdc46efbfac44bae1af3ca45592 661 Pfam PF06480 FtsH Extracellular 8 97 1.0E-11 T 12-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 Vc3S01_0624 f8134cdc46efbfac44bae1af3ca45592 661 Gene3D G3DSA:3.40.50.300 140 326 3.0E-70 T 12-10-2018 Vc3S01_0624 f8134cdc46efbfac44bae1af3ca45592 661 Pfam PF01434 Peptidase family M41 386 595 1.7E-81 T 12-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 Vc3S01_0624 f8134cdc46efbfac44bae1af3ca45592 661 Gene3D G3DSA:1.10.8.60 327 403 2.1E-27 T 12-10-2018 Vc3S01_0624 f8134cdc46efbfac44bae1af3ca45592 661 ProSitePatterns PS00674 AAA-protein family signature. 295 313 - T 12-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 Vc3S01_0624 f8134cdc46efbfac44bae1af3ca45592 661 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 192 324 5.3E-46 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Vc3S01_0624 f8134cdc46efbfac44bae1af3ca45592 661 SMART SM00382 188 327 5.1E-26 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_0624 f8134cdc46efbfac44bae1af3ca45592 661 SUPERFAMILY SSF52540 147 395 9.77E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0624 f8134cdc46efbfac44bae1af3ca45592 661 SUPERFAMILY SSF140990 406 600 2.49E-75 T 12-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 Vc3S01_0624 f8134cdc46efbfac44bae1af3ca45592 661 Gene3D G3DSA:1.20.58.760 406 607 1.8E-72 T 12-10-2018 Vc3S01_2778 c2eb0b6c51e5fd4f77e27cae10ddb6c9 398 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 24 380 1.2E-128 T 12-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Vc3S01_2778 c2eb0b6c51e5fd4f77e27cae10ddb6c9 398 Pfam PF01098 Cell cycle protein 26 381 1.6E-113 T 12-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Vc3S01_2778 c2eb0b6c51e5fd4f77e27cae10ddb6c9 398 Hamap MF_00913 Probable peptidoglycan glycosyltransferase FtsW [ftsW]. 22 388 41.215 T 12-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Vc3S01_2778 c2eb0b6c51e5fd4f77e27cae10ddb6c9 398 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 339 363 - T 12-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Vc3S01_1454 32e83887f2199b476faa8c670970fc8d 209 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 102 113 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Vc3S01_1454 32e83887f2199b476faa8c670970fc8d 209 TIGRFAM TIGR02951 DMSO_dmsB: dimethylsulfoxide reductase, chain B 6 166 1.4E-83 T 12-10-2018 IPR014297 Dimethylsulphoxide reductase, chain B Vc3S01_1454 32e83887f2199b476faa8c670970fc8d 209 Gene3D G3DSA:3.30.70.20 1 198 1.0E-54 T 12-10-2018 Vc3S01_1454 32e83887f2199b476faa8c670970fc8d 209 Pfam PF12800 4Fe-4S binding domain 14 28 0.048 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Vc3S01_1454 32e83887f2199b476faa8c670970fc8d 209 SUPERFAMILY SSF54862 1 202 1.36E-69 T 12-10-2018 Vc3S01_1454 32e83887f2199b476faa8c670970fc8d 209 Pfam PF13247 4Fe-4S dicluster domain 61 156 2.2E-30 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Vc3S01_0809 c30f9831e4878c060aba1f646f64bc63 136 Gene3D G3DSA:3.40.630.30 2 132 3.0E-30 T 12-10-2018 Vc3S01_0809 c30f9831e4878c060aba1f646f64bc63 136 SUPERFAMILY SSF55729 13 122 2.96E-18 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_0809 c30f9831e4878c060aba1f646f64bc63 136 Pfam PF13508 Acetyltransferase (GNAT) domain 49 119 3.8E-11 T 12-10-2018 IPR000182 GNAT domain Vc3S01_A0514 2df19edf1d5267f62ef7c3c2e5a341f4 295 SUPERFAMILY SSF53850 90 294 4.5E-46 T 12-10-2018 Vc3S01_A0514 2df19edf1d5267f62ef7c3c2e5a341f4 295 Pfam PF03466 LysR substrate binding domain 88 292 2.2E-43 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_A0514 2df19edf1d5267f62ef7c3c2e5a341f4 295 SUPERFAMILY SSF46785 4 86 3.27E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A0514 2df19edf1d5267f62ef7c3c2e5a341f4 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 8.5E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A0514 2df19edf1d5267f62ef7c3c2e5a341f4 295 Gene3D G3DSA:1.10.10.10 3 90 1.1E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A0514 2df19edf1d5267f62ef7c3c2e5a341f4 295 Gene3D G3DSA:3.40.190.10 163 263 3.1E-62 T 12-10-2018 Vc3S01_A0514 2df19edf1d5267f62ef7c3c2e5a341f4 295 Gene3D G3DSA:3.40.190.10 91 289 3.1E-62 T 12-10-2018 Vc3S01_A0514 2df19edf1d5267f62ef7c3c2e5a341f4 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.1E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A0514 2df19edf1d5267f62ef7c3c2e5a341f4 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.1E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A0514 2df19edf1d5267f62ef7c3c2e5a341f4 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.1E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_3177 70da2c0614f8f5be2c4d47910c017700 458 Gene3D G3DSA:3.40.50.720 2 139 1.6E-51 T 12-10-2018 Vc3S01_3177 70da2c0614f8f5be2c4d47910c017700 458 Pfam PF02254 TrkA-N domain 3 123 3.9E-29 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Vc3S01_3177 70da2c0614f8f5be2c4d47910c017700 458 Pfam PF02254 TrkA-N domain 235 350 5.0E-25 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Vc3S01_3177 70da2c0614f8f5be2c4d47910c017700 458 Gene3D G3DSA:3.30.70.1450 140 232 1.5E-21 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Vc3S01_3177 70da2c0614f8f5be2c4d47910c017700 458 Pfam PF02080 TrkA-C domain 156 225 4.2E-11 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Vc3S01_3177 70da2c0614f8f5be2c4d47910c017700 458 Pfam PF02080 TrkA-C domain 391 449 3.0E-9 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Vc3S01_3177 70da2c0614f8f5be2c4d47910c017700 458 SUPERFAMILY SSF116726 136 223 2.62E-9 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Vc3S01_3177 70da2c0614f8f5be2c4d47910c017700 458 SUPERFAMILY SSF51735 1 151 8.06E-36 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_3177 70da2c0614f8f5be2c4d47910c017700 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 8.0E-34 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Vc3S01_3177 70da2c0614f8f5be2c4d47910c017700 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 8.0E-34 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Vc3S01_3177 70da2c0614f8f5be2c4d47910c017700 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 8.0E-34 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Vc3S01_3177 70da2c0614f8f5be2c4d47910c017700 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 8.0E-34 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Vc3S01_3177 70da2c0614f8f5be2c4d47910c017700 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 8.0E-34 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Vc3S01_3177 70da2c0614f8f5be2c4d47910c017700 458 SUPERFAMILY SSF116726 366 437 3.27E-7 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Vc3S01_3177 70da2c0614f8f5be2c4d47910c017700 458 Gene3D G3DSA:3.40.50.720 233 366 3.0E-38 T 12-10-2018 Vc3S01_3177 70da2c0614f8f5be2c4d47910c017700 458 SUPERFAMILY SSF51735 232 376 2.58E-33 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_3177 70da2c0614f8f5be2c4d47910c017700 458 Gene3D G3DSA:3.30.70.1450 367 458 1.4E-28 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Vc3S01_2163 6e879b94613f966a628783ada2a59def 118 Pfam PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) 1 117 1.1E-39 T 12-10-2018 IPR013348 Type III secretion system YscG GO:0009405 Vc3S01_2163 6e879b94613f966a628783ada2a59def 118 Gene3D G3DSA:1.25.40.10 1 117 3.2E-35 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_2163 6e879b94613f966a628783ada2a59def 118 TIGRFAM TIGR02508 type_III_yscG: type III secretion protein, YscG family 1 117 2.0E-41 T 12-10-2018 IPR013348 Type III secretion system YscG GO:0009405 Vc3S01_2108 2bad43459b352f777409fbd1fe2a520f 248 Gene3D G3DSA:1.10.10.10 6 76 5.0E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_2108 2bad43459b352f777409fbd1fe2a520f 248 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 67 4.9E-15 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Vc3S01_2108 2bad43459b352f777409fbd1fe2a520f 248 Gene3D G3DSA:1.20.120.530 96 240 1.9E-22 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Vc3S01_2108 2bad43459b352f777409fbd1fe2a520f 248 SUPERFAMILY SSF48008 97 233 1.12E-19 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Vc3S01_2108 2bad43459b352f777409fbd1fe2a520f 248 SUPERFAMILY SSF46785 7 78 1.0E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_2108 2bad43459b352f777409fbd1fe2a520f 248 SMART SM00895 99 228 4.3E-17 T 12-10-2018 IPR011711 GntR, C-terminal Vc3S01_2108 2bad43459b352f777409fbd1fe2a520f 248 Pfam PF07729 FCD domain 99 226 9.6E-19 T 12-10-2018 IPR011711 GntR, C-terminal Vc3S01_2108 2bad43459b352f777409fbd1fe2a520f 248 SMART SM00345 13 74 4.5E-15 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Vc3S01_2108 2bad43459b352f777409fbd1fe2a520f 248 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 2.9E-6 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Vc3S01_2108 2bad43459b352f777409fbd1fe2a520f 248 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 2.9E-6 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Vc3S01_2402 deeb7cc9fe8ce9746ff529a1a2c8ef56 429 PIRSF PIRSF001369 38 429 1.5E-174 T 12-10-2018 IPR024176 Citrate synthase, bacterial-type Vc3S01_2402 deeb7cc9fe8ce9746ff529a1a2c8ef56 429 Pfam PF00285 Citrate synthase, C-terminal domain 49 411 1.0E-134 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 Vc3S01_2402 deeb7cc9fe8ce9746ff529a1a2c8ef56 429 Gene3D G3DSA:1.10.230.10 268 376 3.0E-150 T 12-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain Vc3S01_2402 deeb7cc9fe8ce9746ff529a1a2c8ef56 429 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 12-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 Vc3S01_2402 deeb7cc9fe8ce9746ff529a1a2c8ef56 429 PRINTS PR00143 Citrate synthase signature 296 316 2.7E-55 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 Vc3S01_2402 deeb7cc9fe8ce9746ff529a1a2c8ef56 429 PRINTS PR00143 Citrate synthase signature 379 393 2.7E-55 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 Vc3S01_2402 deeb7cc9fe8ce9746ff529a1a2c8ef56 429 PRINTS PR00143 Citrate synthase signature 219 234 2.7E-55 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 Vc3S01_2402 deeb7cc9fe8ce9746ff529a1a2c8ef56 429 PRINTS PR00143 Citrate synthase signature 241 269 2.7E-55 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 Vc3S01_2402 deeb7cc9fe8ce9746ff529a1a2c8ef56 429 PRINTS PR00143 Citrate synthase signature 359 375 2.7E-55 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 Vc3S01_2402 deeb7cc9fe8ce9746ff529a1a2c8ef56 429 PRINTS PR00143 Citrate synthase signature 165 178 2.7E-55 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 Vc3S01_2402 deeb7cc9fe8ce9746ff529a1a2c8ef56 429 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 16 422 1.8E-238 T 12-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 Vc3S01_2402 deeb7cc9fe8ce9746ff529a1a2c8ef56 429 Gene3D G3DSA:2.20.28.60 1 50 3.8E-26 T 12-10-2018 Vc3S01_2402 deeb7cc9fe8ce9746ff529a1a2c8ef56 429 Gene3D G3DSA:1.10.580.10 57 411 3.0E-150 T 12-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 Vc3S01_2402 deeb7cc9fe8ce9746ff529a1a2c8ef56 429 SUPERFAMILY SSF48256 4 428 1.2E-169 T 12-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 Vc3S01_A1642 c4584ad4a1fe949a07f8765f1d701e0f 521 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site Vc3S01_A1642 c4584ad4a1fe949a07f8765f1d701e0f 521 SMART SM00487 20 219 2.5E-62 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Vc3S01_A1642 c4584ad4a1fe949a07f8765f1d701e0f 521 SMART SM00490 257 338 4.1E-31 T 12-10-2018 IPR001650 Helicase, C-terminal Vc3S01_A1642 c4584ad4a1fe949a07f8765f1d701e0f 521 Gene3D G3DSA:3.40.50.300 215 433 4.1E-45 T 12-10-2018 Vc3S01_A1642 c4584ad4a1fe949a07f8765f1d701e0f 521 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 493 51.021 T 12-10-2018 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 Vc3S01_A1642 c4584ad4a1fe949a07f8765f1d701e0f 521 Gene3D G3DSA:3.40.50.300 1 209 1.2E-76 T 12-10-2018 Vc3S01_A1642 c4584ad4a1fe949a07f8765f1d701e0f 521 Pfam PF00270 DEAD/DEAH box helicase 26 194 2.0E-47 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Vc3S01_A1642 c4584ad4a1fe949a07f8765f1d701e0f 521 SUPERFAMILY SSF52540 73 359 9.86E-74 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A1642 c4584ad4a1fe949a07f8765f1d701e0f 521 Pfam PF00271 Helicase conserved C-terminal domain 232 338 6.5E-27 T 12-10-2018 IPR001650 Helicase, C-terminal Vc3S01_3027 622847a6ba6cf96bf91fe8a8d11695d7 254 Pfam PF11932 Protein of unknown function (DUF3450) 13 249 3.0E-88 T 12-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 Vc3S01_3027 622847a6ba6cf96bf91fe8a8d11695d7 254 PIRSF PIRSF028069 4 254 8.8E-98 T 12-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 Vc3S01_1589 ca63f06cae7f065b003806e2f6d871bd 869 PRINTS PR00415 Aconitase family signature 273 286 4.9E-26 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Vc3S01_1589 ca63f06cae7f065b003806e2f6d871bd 869 PRINTS PR00415 Aconitase family signature 144 157 4.9E-26 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Vc3S01_1589 ca63f06cae7f065b003806e2f6d871bd 869 PRINTS PR00415 Aconitase family signature 211 226 4.9E-26 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Vc3S01_1589 ca63f06cae7f065b003806e2f6d871bd 869 PRINTS PR00415 Aconitase family signature 470 483 4.9E-26 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Vc3S01_1589 ca63f06cae7f065b003806e2f6d871bd 869 PRINTS PR00415 Aconitase family signature 408 419 4.9E-26 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Vc3S01_1589 ca63f06cae7f065b003806e2f6d871bd 869 PRINTS PR00415 Aconitase family signature 197 210 4.9E-26 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Vc3S01_1589 ca63f06cae7f065b003806e2f6d871bd 869 PRINTS PR00415 Aconitase family signature 366 380 4.9E-26 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Vc3S01_1589 ca63f06cae7f065b003806e2f6d871bd 869 PRINTS PR00415 Aconitase family signature 168 176 4.9E-26 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Vc3S01_1589 ca63f06cae7f065b003806e2f6d871bd 869 PRINTS PR00415 Aconitase family signature 287 300 4.9E-26 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Vc3S01_1589 ca63f06cae7f065b003806e2f6d871bd 869 TIGRFAM TIGR02333 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent 8 867 0.0 T 12-10-2018 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent GO:0019679 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 Vc3S01_1589 ca63f06cae7f065b003806e2f6d871bd 869 Gene3D G3DSA:3.30.499.20 11 365 5.7E-132 T 12-10-2018 Vc3S01_1589 ca63f06cae7f065b003806e2f6d871bd 869 SUPERFAMILY SSF53732 15 599 8.63E-188 T 12-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 Vc3S01_1589 ca63f06cae7f065b003806e2f6d871bd 869 Gene3D G3DSA:3.30.499.10 367 567 1.0E-77 T 12-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 Vc3S01_1589 ca63f06cae7f065b003806e2f6d871bd 869 Gene3D G3DSA:3.20.19.10 628 867 2.3E-83 T 12-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 Vc3S01_1589 ca63f06cae7f065b003806e2f6d871bd 869 Gene3D G3DSA:1.10.1440.20 568 622 5.0E-9 T 12-10-2018 Vc3S01_1589 ca63f06cae7f065b003806e2f6d871bd 869 Pfam PF00694 Aconitase C-terminal domain 666 797 2.7E-30 T 12-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 Vc3S01_1589 ca63f06cae7f065b003806e2f6d871bd 869 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 34 865 3.4E-291 T 12-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 Vc3S01_1589 ca63f06cae7f065b003806e2f6d871bd 869 Pfam PF00330 Aconitase family (aconitate hydratase) 76 539 4.3E-145 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Vc3S01_1589 ca63f06cae7f065b003806e2f6d871bd 869 SUPERFAMILY SSF52016 604 866 2.94E-68 T 12-10-2018 Vc3S01_1319 5aa3abce49480420822b4f33eae1cb86 92 Gene3D G3DSA:3.30.2310.20 1 90 1.0E-15 T 12-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Vc3S01_1319 5aa3abce49480420822b4f33eae1cb86 92 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 1 89 9.3E-18 T 12-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family Vc3S01_1319 5aa3abce49480420822b4f33eae1cb86 92 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 2 89 4.9E-15 T 12-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family Vc3S01_0853 8ec4f2697cb3719210881c12e21c80eb 580 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 53 579 6.6E-72 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Vc3S01_0853 8ec4f2697cb3719210881c12e21c80eb 580 PRINTS PR01009 Flagellar M-ring protein signature 181 195 6.2E-22 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Vc3S01_0853 8ec4f2697cb3719210881c12e21c80eb 580 PRINTS PR01009 Flagellar M-ring protein signature 224 242 6.2E-22 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Vc3S01_0853 8ec4f2697cb3719210881c12e21c80eb 580 PRINTS PR01009 Flagellar M-ring protein signature 149 167 6.2E-22 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Vc3S01_0853 8ec4f2697cb3719210881c12e21c80eb 580 PRINTS PR01009 Flagellar M-ring protein signature 374 398 6.2E-22 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Vc3S01_0853 8ec4f2697cb3719210881c12e21c80eb 580 PRINTS PR01009 Flagellar M-ring protein signature 294 312 6.2E-22 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Vc3S01_0853 8ec4f2697cb3719210881c12e21c80eb 580 Pfam PF08345 Flagellar M-ring protein C-terminal 281 451 6.8E-39 T 12-10-2018 IPR013556 Flagellar M-ring C-terminal Vc3S01_0853 8ec4f2697cb3719210881c12e21c80eb 580 PIRSF PIRSF004862 27 580 3.0E-162 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Vc3S01_0853 8ec4f2697cb3719210881c12e21c80eb 580 Gene3D G3DSA:3.30.300.30 151 246 1.3E-10 T 12-10-2018 Vc3S01_0853 8ec4f2697cb3719210881c12e21c80eb 580 Pfam PF01514 Secretory protein of YscJ/FliF family 62 248 1.6E-54 T 12-10-2018 IPR006182 Secretory protein YscJ/FliF Vc3S01_2692 ae397468ef90aa3654a8e0a7794139c4 98 SUPERFAMILY SSF141371 2 96 3.02E-19 T 12-10-2018 Vc3S01_2692 ae397468ef90aa3654a8e0a7794139c4 98 Gene3D G3DSA:2.40.10.220 1 96 6.4E-20 T 12-10-2018 Vc3S01_2692 ae397468ef90aa3654a8e0a7794139c4 98 Pfam PF07238 PilZ domain 2 76 4.7E-7 T 12-10-2018 IPR009875 PilZ domain GO:0035438 Vc3S01_A0744 e93f82f94bd667bc4becc4b876c535a6 409 Pfam PF01546 Peptidase family M20/M25/M40 139 401 2.1E-12 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 Vc3S01_A0744 e93f82f94bd667bc4becc4b876c535a6 409 Pfam PF07687 Peptidase dimerisation domain 206 304 6.3E-8 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain Vc3S01_A0744 e93f82f94bd667bc4becc4b876c535a6 409 Gene3D G3DSA:3.30.70.360 209 319 6.3E-173 T 12-10-2018 Vc3S01_A0744 e93f82f94bd667bc4becc4b876c535a6 409 SUPERFAMILY SSF55031 209 320 2.96E-38 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Vc3S01_A0744 e93f82f94bd667bc4becc4b876c535a6 409 PIRSF PIRSF037215 1 408 5.6E-182 T 12-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 Vc3S01_A0744 e93f82f94bd667bc4becc4b876c535a6 409 Gene3D G3DSA:3.40.630.10 4 400 6.3E-173 T 12-10-2018 Vc3S01_A0744 e93f82f94bd667bc4becc4b876c535a6 409 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 138 177 - T 12-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 Vc3S01_A0744 e93f82f94bd667bc4becc4b876c535a6 409 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 73 82 - T 12-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 Vc3S01_A0744 e93f82f94bd667bc4becc4b876c535a6 409 SUPERFAMILY SSF53187 1 406 9.05E-80 T 12-10-2018 Vc3S01_A0744 e93f82f94bd667bc4becc4b876c535a6 409 TIGRFAM TIGR01882 peptidase-T: peptidase T 3 406 8.2E-161 T 12-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 Vc3S01_A0744 e93f82f94bd667bc4becc4b876c535a6 409 Hamap MF_00550 Peptidase T [pepT]. 1 404 57.449 T 12-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 Vc3S01_A0436 d185f94a8faf1c2422b2bf51a4944fe5 593 Pfam PF12558 ATP-binding cassette cobalt transporter 235 306 6.2E-21 T 12-10-2018 IPR022216 Putative ABC cobalt transporter Vc3S01_A0436 d185f94a8faf1c2422b2bf51a4944fe5 593 SUPERFAMILY SSF52540 297 526 2.02E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A0436 d185f94a8faf1c2422b2bf51a4944fe5 593 Pfam PF00005 ABC transporter 315 461 6.0E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_A0436 d185f94a8faf1c2422b2bf51a4944fe5 593 Gene3D G3DSA:3.40.50.300 1 254 9.4E-69 T 12-10-2018 Vc3S01_A0436 d185f94a8faf1c2422b2bf51a4944fe5 593 SMART SM00382 29 221 1.1E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_A0436 d185f94a8faf1c2422b2bf51a4944fe5 593 SMART SM00382 324 510 8.4E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_A0436 d185f94a8faf1c2422b2bf51a4944fe5 593 Pfam PF00005 ABC transporter 20 170 1.5E-26 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_A0436 d185f94a8faf1c2422b2bf51a4944fe5 593 ProSitePatterns PS00211 ABC transporters family signature. 433 447 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_A0436 d185f94a8faf1c2422b2bf51a4944fe5 593 SUPERFAMILY SSF52540 2 235 2.54E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A0436 d185f94a8faf1c2422b2bf51a4944fe5 593 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_A0436 d185f94a8faf1c2422b2bf51a4944fe5 593 Gene3D G3DSA:3.40.50.300 296 583 8.7E-64 T 12-10-2018 Vc3S01_0239 ddfb643610979b7d6671a9cfd3974a96 144 SMART SM00450 40 138 1.2E-21 T 12-10-2018 IPR001763 Rhodanese-like domain Vc3S01_0239 ddfb643610979b7d6671a9cfd3974a96 144 SUPERFAMILY SSF52821 15 143 2.49E-31 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily Vc3S01_0239 ddfb643610979b7d6671a9cfd3974a96 144 Pfam PF00581 Rhodanese-like domain 44 135 1.4E-17 T 12-10-2018 IPR001763 Rhodanese-like domain Vc3S01_0239 ddfb643610979b7d6671a9cfd3974a96 144 Gene3D G3DSA:3.40.250.10 22 143 1.3E-25 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily Vc3S01_2828 41caec7a83e04d58d1355ead53b9cf95 147 SUPERFAMILY SSF89095 1 146 9.42E-45 T 12-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 Vc3S01_2828 41caec7a83e04d58d1355ead53b9cf95 147 Gene3D G3DSA:1.10.10.410 91 147 1.3E-20 T 12-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal Vc3S01_2828 41caec7a83e04d58d1355ead53b9cf95 147 Pfam PF09424 Yqey-like protein 5 146 1.3E-57 T 12-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 Vc3S01_2828 41caec7a83e04d58d1355ead53b9cf95 147 Gene3D G3DSA:1.10.1510.10 1 90 1.5E-27 T 12-10-2018 Vc3S01_A0426 3b7756885c86ebcd7ff2f4637be6cd40 61 Gene3D G3DSA:3.40.630.30 1 61 3.6E-7 T 12-10-2018 Vc3S01_A0426 3b7756885c86ebcd7ff2f4637be6cd40 61 SUPERFAMILY SSF55729 2 57 1.53E-9 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_A0426 3b7756885c86ebcd7ff2f4637be6cd40 61 Pfam PF14542 GCN5-related N-acetyl-transferase 14 56 9.5E-8 T 12-10-2018 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase Vc3S01_2322 f5f06d4df7fad8b5299eb0b5c7ff1584 783 SUPERFAMILY SSF52540 312 586 5.85E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2322 f5f06d4df7fad8b5299eb0b5c7ff1584 783 SUPERFAMILY SSF88697 10 200 3.48E-48 T 12-10-2018 IPR015947 PUA-like superfamily Vc3S01_2322 f5f06d4df7fad8b5299eb0b5c7ff1584 783 Hamap MF_01973 Lon protease [lon]. 11 771 71.824 T 12-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 Vc3S01_2322 f5f06d4df7fad8b5299eb0b5c7ff1584 783 Gene3D G3DSA:3.40.50.300 312 489 2.0E-60 T 12-10-2018 Vc3S01_2322 f5f06d4df7fad8b5299eb0b5c7ff1584 783 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 569 771 5.9E-99 T 12-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 Vc3S01_2322 f5f06d4df7fad8b5299eb0b5c7ff1584 783 Gene3D G3DSA:1.20.58.1480 119 244 5.4E-44 T 12-10-2018 Vc3S01_2322 f5f06d4df7fad8b5299eb0b5c7ff1584 783 TIGRFAM TIGR00763 lon: endopeptidase La 12 770 0.0 T 12-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 Vc3S01_2322 f5f06d4df7fad8b5299eb0b5c7ff1584 783 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 675 683 - T 12-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 Vc3S01_2322 f5f06d4df7fad8b5299eb0b5c7ff1584 783 PIRSF PIRSF001174 1 774 0.0 T 12-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 Vc3S01_2322 f5f06d4df7fad8b5299eb0b5c7ff1584 783 SMART SM00464 10 201 3.4E-76 T 12-10-2018 IPR003111 Lon, substrate-binding domain Vc3S01_2322 f5f06d4df7fad8b5299eb0b5c7ff1584 783 Gene3D G3DSA:3.30.230.10 584 771 7.1E-85 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Vc3S01_2322 f5f06d4df7fad8b5299eb0b5c7ff1584 783 SUPERFAMILY SSF54211 594 769 9.1E-59 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Vc3S01_2322 f5f06d4df7fad8b5299eb0b5c7ff1584 783 SMART SM00382 347 491 6.3E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_2322 f5f06d4df7fad8b5299eb0b5c7ff1584 783 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 351 487 9.3E-17 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Vc3S01_2322 f5f06d4df7fad8b5299eb0b5c7ff1584 783 Gene3D G3DSA:1.10.8.60 490 583 3.1E-33 T 12-10-2018 Vc3S01_2322 f5f06d4df7fad8b5299eb0b5c7ff1584 783 Gene3D G3DSA:2.30.130.40 1 116 1.9E-35 T 12-10-2018 Vc3S01_2322 f5f06d4df7fad8b5299eb0b5c7ff1584 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 594 610 1.8E-56 T 12-10-2018 Vc3S01_2322 f5f06d4df7fad8b5299eb0b5c7ff1584 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 702 721 1.8E-56 T 12-10-2018 Vc3S01_2322 f5f06d4df7fad8b5299eb0b5c7ff1584 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 355 374 1.8E-56 T 12-10-2018 Vc3S01_2322 f5f06d4df7fad8b5299eb0b5c7ff1584 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 672 691 1.8E-56 T 12-10-2018 Vc3S01_2322 f5f06d4df7fad8b5299eb0b5c7ff1584 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 725 743 1.8E-56 T 12-10-2018 Vc3S01_2322 f5f06d4df7fad8b5299eb0b5c7ff1584 783 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 196 2.0E-40 T 12-10-2018 IPR003111 Lon, substrate-binding domain Vc3S01_1116 690503b6cd79c5f01671af2ba873cb13 405 Pfam PF00480 ROK family 88 390 9.3E-71 T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Vc3S01_1116 690503b6cd79c5f01671af2ba873cb13 405 Gene3D G3DSA:1.10.10.10 2 81 5.5E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_1116 690503b6cd79c5f01671af2ba873cb13 405 Gene3D G3DSA:3.30.420.40 91 387 2.4E-110 T 12-10-2018 Vc3S01_1116 690503b6cd79c5f01671af2ba873cb13 405 ProSitePatterns PS01125 ROK family signature. 218 245 - T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Vc3S01_1116 690503b6cd79c5f01671af2ba873cb13 405 Gene3D G3DSA:3.30.420.40 208 377 2.4E-110 T 12-10-2018 Vc3S01_1116 690503b6cd79c5f01671af2ba873cb13 405 SUPERFAMILY SSF53067 86 395 2.55E-55 T 12-10-2018 Vc3S01_1116 690503b6cd79c5f01671af2ba873cb13 405 SUPERFAMILY SSF46785 10 76 3.58E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_1039 cced9c61523c17fe6f1e99de1aaa32ee 197 PIRSF PIRSF005784 3 188 5.8E-87 T 12-10-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 Vc3S01_1039 cced9c61523c17fe6f1e99de1aaa32ee 197 Gene3D G3DSA:1.10.15.40 38 87 4.6E-8 T 12-10-2018 Vc3S01_1039 cced9c61523c17fe6f1e99de1aaa32ee 197 Hamap MF_00463 Ion-translocating oxidoreductase complex subunit B [rsxB]. 4 166 26.194 T 12-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 Vc3S01_1039 cced9c61523c17fe6f1e99de1aaa32ee 197 Gene3D G3DSA:3.30.70.20 136 186 5.4E-9 T 12-10-2018 Vc3S01_1039 cced9c61523c17fe6f1e99de1aaa32ee 197 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 1 187 2.7E-87 T 12-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 Vc3S01_1039 cced9c61523c17fe6f1e99de1aaa32ee 197 SUPERFAMILY SSF54862 37 173 8.38E-31 T 12-10-2018 Vc3S01_1039 cced9c61523c17fe6f1e99de1aaa32ee 197 Pfam PF14697 4Fe-4S dicluster domain 107 161 6.2E-18 T 12-10-2018 Vc3S01_1039 cced9c61523c17fe6f1e99de1aaa32ee 197 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 144 155 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Vc3S01_1039 cced9c61523c17fe6f1e99de1aaa32ee 197 Pfam PF04060 Putative Fe-S cluster 44 75 7.9E-15 T 12-10-2018 IPR007202 4Fe-4S domain GO:0051536 Vc3S01_1039 cced9c61523c17fe6f1e99de1aaa32ee 197 Gene3D G3DSA:3.30.70.20 91 132 5.4E-6 T 12-10-2018 Vc3S01_0658 2401360eba14ae336f4035248b2059e0 459 PRINTS PR01874 DNA repair protein radA signature 176 200 7.0E-94 T 12-10-2018 Vc3S01_0658 2401360eba14ae336f4035248b2059e0 459 PRINTS PR01874 DNA repair protein radA signature 324 347 7.0E-94 T 12-10-2018 Vc3S01_0658 2401360eba14ae336f4035248b2059e0 459 PRINTS PR01874 DNA repair protein radA signature 85 113 7.0E-94 T 12-10-2018 Vc3S01_0658 2401360eba14ae336f4035248b2059e0 459 PRINTS PR01874 DNA repair protein radA signature 215 243 7.0E-94 T 12-10-2018 Vc3S01_0658 2401360eba14ae336f4035248b2059e0 459 PRINTS PR01874 DNA repair protein radA signature 10 34 7.0E-94 T 12-10-2018 Vc3S01_0658 2401360eba14ae336f4035248b2059e0 459 PRINTS PR01874 DNA repair protein radA signature 126 143 7.0E-94 T 12-10-2018 Vc3S01_0658 2401360eba14ae336f4035248b2059e0 459 PRINTS PR01874 DNA repair protein radA signature 250 276 7.0E-94 T 12-10-2018 Vc3S01_0658 2401360eba14ae336f4035248b2059e0 459 Pfam PF13481 AAA domain 85 224 1.0E-12 T 12-10-2018 Vc3S01_0658 2401360eba14ae336f4035248b2059e0 459 SUPERFAMILY SSF54211 257 456 4.17E-43 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Vc3S01_0658 2401360eba14ae336f4035248b2059e0 459 SUPERFAMILY SSF52540 70 294 8.82E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0658 2401360eba14ae336f4035248b2059e0 459 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 453 1.1E-225 T 12-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 Vc3S01_0658 2401360eba14ae336f4035248b2059e0 459 Gene3D G3DSA:3.30.230.10 314 458 1.1E-21 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Vc3S01_0658 2401360eba14ae336f4035248b2059e0 459 Hamap MF_01498 DNA repair protein RadA [radA]. 21 457 43.088 T 12-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 Vc3S01_0658 2401360eba14ae336f4035248b2059e0 459 SMART SM00382 93 246 3.8E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_0658 2401360eba14ae336f4035248b2059e0 459 Pfam PF13541 Subunit ChlI of Mg-chelatase 347 432 1.5E-9 T 12-10-2018 Vc3S01_0658 2401360eba14ae336f4035248b2059e0 459 Gene3D G3DSA:3.40.50.300 68 280 4.3E-38 T 12-10-2018 Vc3S01_0874 72d386be1b8b40a1e407fc0478cc9f3d 748 SUPERFAMILY SSF47384 360 419 6.28E-14 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Vc3S01_0874 72d386be1b8b40a1e407fc0478cc9f3d 748 Pfam PF01627 Hpt domain 8 99 6.9E-17 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Vc3S01_0874 72d386be1b8b40a1e407fc0478cc9f3d 748 SMART SM01231 358 418 1.7E-17 T 12-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 Vc3S01_0874 72d386be1b8b40a1e407fc0478cc9f3d 748 Gene3D G3DSA:1.20.120.160 2 143 3.6E-36 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 Vc3S01_0874 72d386be1b8b40a1e407fc0478cc9f3d 748 SUPERFAMILY SSF55874 421 604 1.01E-38 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_0874 72d386be1b8b40a1e407fc0478cc9f3d 748 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 359 418 3.0E-12 T 12-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 Vc3S01_0874 72d386be1b8b40a1e407fc0478cc9f3d 748 Gene3D G3DSA:2.30.30.40 606 735 5.7E-35 T 12-10-2018 Vc3S01_0874 72d386be1b8b40a1e407fc0478cc9f3d 748 Pfam PF01584 CheW-like domain 612 741 1.1E-22 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Vc3S01_0874 72d386be1b8b40a1e407fc0478cc9f3d 748 SMART SM00073 6 103 3.6E-19 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Vc3S01_0874 72d386be1b8b40a1e407fc0478cc9f3d 748 PRINTS PR00344 Bacterial sensor protein C-terminal signature 566 584 9.6E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_0874 72d386be1b8b40a1e407fc0478cc9f3d 748 PRINTS PR00344 Bacterial sensor protein C-terminal signature 590 603 9.6E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_0874 72d386be1b8b40a1e407fc0478cc9f3d 748 PRINTS PR00344 Bacterial sensor protein C-terminal signature 550 560 9.6E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_0874 72d386be1b8b40a1e407fc0478cc9f3d 748 PRINTS PR00344 Bacterial sensor protein C-terminal signature 508 522 9.6E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_0874 72d386be1b8b40a1e407fc0478cc9f3d 748 Gene3D G3DSA:3.30.565.10 419 605 7.0E-56 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_0874 72d386be1b8b40a1e407fc0478cc9f3d 748 SMART SM00387 463 606 2.6E-21 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_0874 72d386be1b8b40a1e407fc0478cc9f3d 748 SUPERFAMILY SSF47226 6 129 6.02E-31 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 Vc3S01_0874 72d386be1b8b40a1e407fc0478cc9f3d 748 Gene3D G3DSA:1.10.287.560 359 418 2.2E-19 T 12-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 Vc3S01_0874 72d386be1b8b40a1e407fc0478cc9f3d 748 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 466 605 2.7E-17 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_0874 72d386be1b8b40a1e407fc0478cc9f3d 748 Gene3D G3DSA:2.40.50.180 629 694 5.7E-35 T 12-10-2018 Vc3S01_0874 72d386be1b8b40a1e407fc0478cc9f3d 748 SMART SM00260 598 739 4.4E-33 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Vc3S01_0874 72d386be1b8b40a1e407fc0478cc9f3d 748 SUPERFAMILY SSF50341 605 739 1.44E-30 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Vc3S01_1928 309e1abd99081f6cdab4c6cd7eb85536 573 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_1928 309e1abd99081f6cdab4c6cd7eb85536 573 SUPERFAMILY SSF90123 7 323 1.83E-40 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Vc3S01_1928 309e1abd99081f6cdab4c6cd7eb85536 573 Gene3D G3DSA:1.20.1560.10 1 321 2.8E-27 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Vc3S01_1928 309e1abd99081f6cdab4c6cd7eb85536 573 SUPERFAMILY SSF52540 335 571 9.52E-72 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_1928 309e1abd99081f6cdab4c6cd7eb85536 573 Pfam PF00664 ABC transporter transmembrane region 62 272 3.2E-10 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Vc3S01_1928 309e1abd99081f6cdab4c6cd7eb85536 573 Gene3D G3DSA:3.40.50.300 326 573 2.9E-76 T 12-10-2018 Vc3S01_1928 309e1abd99081f6cdab4c6cd7eb85536 573 SMART SM00382 365 549 1.1E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_1928 309e1abd99081f6cdab4c6cd7eb85536 573 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 6 533 1.1E-135 T 12-10-2018 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0016021|GO:0034775|GO:0042626|GO:0045454 Vc3S01_1928 309e1abd99081f6cdab4c6cd7eb85536 573 Pfam PF00005 ABC transporter 356 502 5.4E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_A1251 ea0d1dcb94f9d99a057fe992d1af5282 905 Pfam PF13229 Right handed beta helix region 116 323 9.1E-12 T 12-10-2018 IPR039448 Right handed beta helix domain Vc3S01_A1251 ea0d1dcb94f9d99a057fe992d1af5282 905 TIGRFAM TIGR03805 beta_helix_1: parallel beta-helix repeat-containing protein 62 402 1.2E-88 T 12-10-2018 IPR022442 Parallel beta-helix repeat-containing domain Vc3S01_A1251 ea0d1dcb94f9d99a057fe992d1af5282 905 SUPERFAMILY SSF51126 57 280 4.63E-30 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor Vc3S01_A1251 ea0d1dcb94f9d99a057fe992d1af5282 905 Gene3D G3DSA:2.160.20.10 55 388 4.2E-22 T 12-10-2018 IPR012334 Pectin lyase fold Vc3S01_A1251 ea0d1dcb94f9d99a057fe992d1af5282 905 SUPERFAMILY SSF46626 785 897 1.3E-5 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Vc3S01_A1251 ea0d1dcb94f9d99a057fe992d1af5282 905 TIGRFAM TIGR03806 chp_HNE_0200: conserved hypothetical protein, HNE_0200 family 557 895 9.9E-97 T 12-10-2018 IPR022269 Conserved hypothetical protein CHP03806, HNE0200 family Vc3S01_A1251 ea0d1dcb94f9d99a057fe992d1af5282 905 TIGRFAM TIGR03804 para_beta_helix: parallel beta-helix repeat 199 241 1.3E-5 T 12-10-2018 IPR022441 Parallel beta-helix repeat-2 Reactome: R-HSA-8951664|Reactome: R-HSA-983168 Vc3S01_A1251 ea0d1dcb94f9d99a057fe992d1af5282 905 SMART SM00710 227 248 140.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat Vc3S01_A1251 ea0d1dcb94f9d99a057fe992d1af5282 905 SMART SM00710 182 204 8.2 T 12-10-2018 IPR006626 Parallel beta-helix repeat Vc3S01_A1251 ea0d1dcb94f9d99a057fe992d1af5282 905 SMART SM00710 359 383 4300.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat Vc3S01_A1251 ea0d1dcb94f9d99a057fe992d1af5282 905 SMART SM00710 123 145 1300.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat Vc3S01_A1251 ea0d1dcb94f9d99a057fe992d1af5282 905 SMART SM00710 259 305 5500.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat Vc3S01_A1251 ea0d1dcb94f9d99a057fe992d1af5282 905 SMART SM00710 205 226 770.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat Vc3S01_2027 8856ef3de92a5e93b597a217fbe18659 301 Gene3D G3DSA:3.90.1640.10 1 186 1.8E-63 T 12-10-2018 Vc3S01_2027 8856ef3de92a5e93b597a217fbe18659 301 Pfam PF02833 DHHA2 domain 180 297 5.3E-15 T 12-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Vc3S01_2027 8856ef3de92a5e93b597a217fbe18659 301 SMART SM01131 178 300 4.7E-33 T 12-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Vc3S01_2027 8856ef3de92a5e93b597a217fbe18659 301 SUPERFAMILY SSF64182 1 298 1.15E-66 T 12-10-2018 IPR038763 DHH phosphoesterase superfamily Vc3S01_2027 8856ef3de92a5e93b597a217fbe18659 301 Gene3D G3DSA:3.10.310.20 187 300 3.1E-22 T 12-10-2018 IPR038222 DHHA2 domain superfamily KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Vc3S01_2027 8856ef3de92a5e93b597a217fbe18659 301 Pfam PF01368 DHH family 2 142 4.0E-22 T 12-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Vc3S01_A0420 1eac821e9ddc5419b4367e526448d871 543 Pfam PF00005 ABC transporter 304 455 2.6E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_A0420 1eac821e9ddc5419b4367e526448d871 543 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 506 537 0.0015 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Vc3S01_A0420 1eac821e9ddc5419b4367e526448d871 543 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 265 1.6E-5 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Vc3S01_A0420 1eac821e9ddc5419b4367e526448d871 543 Gene3D G3DSA:3.40.50.300 4 278 1.0E-81 T 12-10-2018 Vc3S01_A0420 1eac821e9ddc5419b4367e526448d871 543 Gene3D G3DSA:3.40.50.300 279 543 3.9E-86 T 12-10-2018 Vc3S01_A0420 1eac821e9ddc5419b4367e526448d871 543 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_A0420 1eac821e9ddc5419b4367e526448d871 543 SMART SM00382 35 235 4.0E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_A0420 1eac821e9ddc5419b4367e526448d871 543 SMART SM00382 312 504 2.5E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_A0420 1eac821e9ddc5419b4367e526448d871 543 ProSitePatterns PS00211 ABC transporters family signature. 427 441 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_A0420 1eac821e9ddc5419b4367e526448d871 543 SUPERFAMILY SSF52540 295 526 1.33E-69 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A0420 1eac821e9ddc5419b4367e526448d871 543 Pfam PF00005 ABC transporter 26 185 5.1E-26 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_A0420 1eac821e9ddc5419b4367e526448d871 543 SUPERFAMILY SSF52540 6 256 2.32E-67 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_3151 4931beff0b2666db180691a75f7086a4 571 Gene3D G3DSA:3.40.50.300 1 293 2.1E-86 T 12-10-2018 Vc3S01_3151 4931beff0b2666db180691a75f7086a4 571 Gene3D G3DSA:3.40.50.300 301 571 1.7E-86 T 12-10-2018 Vc3S01_3151 4931beff0b2666db180691a75f7086a4 571 SMART SM00382 32 231 7.6E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_3151 4931beff0b2666db180691a75f7086a4 571 SMART SM00382 338 534 2.4E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_3151 4931beff0b2666db180691a75f7086a4 571 ProSitePatterns PS00211 ABC transporters family signature. 455 469 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_3151 4931beff0b2666db180691a75f7086a4 571 Pfam PF00005 ABC transporter 24 181 1.2E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_3151 4931beff0b2666db180691a75f7086a4 571 SUPERFAMILY SSF52540 3 253 8.95E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_3151 4931beff0b2666db180691a75f7086a4 571 SUPERFAMILY SSF52540 304 553 8.26E-73 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_3151 4931beff0b2666db180691a75f7086a4 571 Pfam PF00005 ABC transporter 330 483 8.1E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_3151 4931beff0b2666db180691a75f7086a4 571 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_3151 4931beff0b2666db180691a75f7086a4 571 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 534 566 8.3E-4 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Vc3S01_3151 4931beff0b2666db180691a75f7086a4 571 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 281 3.0E-7 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Vc3S01_0858 71a0ed63f597beed8770c4f84f453b74 104 SUPERFAMILY SSF54909 3 97 3.3E-15 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel Vc3S01_0858 71a0ed63f597beed8770c4f84f453b74 104 Pfam PF07978 NIPSNAP 5 96 8.8E-7 T 12-10-2018 IPR012577 NIPSNAP Vc3S01_0858 71a0ed63f597beed8770c4f84f453b74 104 Gene3D G3DSA:3.30.70.100 2 103 3.9E-10 T 12-10-2018 Vc3S01_1481 2f27c2d90056ffcb8a81d76c2e2ffac6 179 SUPERFAMILY SSF56973 117 165 3.66E-5 T 12-10-2018 Vc3S01_1481 2f27c2d90056ffcb8a81d76c2e2ffac6 179 PRINTS PR00754 Aerolysin signature 44 62 3.0E-16 T 12-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 Vc3S01_1481 2f27c2d90056ffcb8a81d76c2e2ffac6 179 PRINTS PR00754 Aerolysin signature 63 82 3.0E-16 T 12-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 Vc3S01_1481 2f27c2d90056ffcb8a81d76c2e2ffac6 179 PRINTS PR00754 Aerolysin signature 138 160 3.0E-16 T 12-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 Vc3S01_1481 2f27c2d90056ffcb8a81d76c2e2ffac6 179 SUPERFAMILY SSF56436 24 105 1.95E-33 T 12-10-2018 IPR016187 C-type lectin fold Vc3S01_1481 2f27c2d90056ffcb8a81d76c2e2ffac6 179 Gene3D G3DSA:3.10.40.10 22 111 1.4E-31 T 12-10-2018 IPR037015 Aerolysin/Pertussis toxin (APT), N-terminal domain superfamily Vc3S01_1481 2f27c2d90056ffcb8a81d76c2e2ffac6 179 Gene3D G3DSA:3.30.412.10 112 178 1.4E-15 T 12-10-2018 Vc3S01_1481 2f27c2d90056ffcb8a81d76c2e2ffac6 179 Pfam PF01117 Aerolysin toxin 118 164 1.3E-12 T 12-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 Vc3S01_1481 2f27c2d90056ffcb8a81d76c2e2ffac6 179 Pfam PF03440 Aerolysin/Pertussis toxin (APT) domain 24 100 9.9E-11 T 12-10-2018 IPR005138 Aerolysin/Pertussis toxin domain Vc3S01_0565 debb5ea35fe5af27647068ba56d6cff1 295 SUPERFAMILY SSF54675 15 128 2.79E-33 T 12-10-2018 Vc3S01_0565 debb5ea35fe5af27647068ba56d6cff1 295 Gene3D G3DSA:3.20.20.70 138 284 4.0E-125 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_0565 debb5ea35fe5af27647068ba56d6cff1 295 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 42 127 7.0E-27 T 12-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 Vc3S01_0565 debb5ea35fe5af27647068ba56d6cff1 295 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 130 293 1.6E-57 T 12-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 Vc3S01_0565 debb5ea35fe5af27647068ba56d6cff1 295 Gene3D G3DSA:3.90.1170.20 21 293 4.0E-125 T 12-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 Vc3S01_0565 debb5ea35fe5af27647068ba56d6cff1 295 SUPERFAMILY SSF51690 130 294 1.77E-59 T 12-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 Vc3S01_0565 debb5ea35fe5af27647068ba56d6cff1 295 PIRSF PIRSF006250 16 295 1.3E-100 T 12-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 Vc3S01_0565 debb5ea35fe5af27647068ba56d6cff1 295 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 26 294 4.2E-94 T 12-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 Vc3S01_A0585 e4e25ab9e3d4f6a5d07b3f23e764d400 313 SUPERFAMILY SSF53850 92 303 7.06E-20 T 12-10-2018 Vc3S01_A0585 e4e25ab9e3d4f6a5d07b3f23e764d400 313 Gene3D G3DSA:3.40.190.10 93 298 1.7E-20 T 12-10-2018 Vc3S01_A0585 e4e25ab9e3d4f6a5d07b3f23e764d400 313 SUPERFAMILY SSF46785 7 84 2.04E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A0585 e4e25ab9e3d4f6a5d07b3f23e764d400 313 Gene3D G3DSA:3.40.190.10 174 272 1.7E-20 T 12-10-2018 Vc3S01_A0585 e4e25ab9e3d4f6a5d07b3f23e764d400 313 Pfam PF03466 LysR substrate binding domain 99 301 3.7E-13 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_A0585 e4e25ab9e3d4f6a5d07b3f23e764d400 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 2.1E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A0585 e4e25ab9e3d4f6a5d07b3f23e764d400 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 2.1E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A0585 e4e25ab9e3d4f6a5d07b3f23e764d400 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 2.1E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A0585 e4e25ab9e3d4f6a5d07b3f23e764d400 313 Gene3D G3DSA:1.10.10.10 1 90 7.0E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A0585 e4e25ab9e3d4f6a5d07b3f23e764d400 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 7.0E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A0547 e3e0714d4dd5e31ca701e07156f9bc6e 605 Pfam PF03476 MOSC N-terminal beta barrel domain 5 117 3.5E-29 T 12-10-2018 IPR005303 MOSC, N-terminal beta barrel KEGG: 00790+2.8.1.9|MetaCyc: PWY-5963 Vc3S01_A0547 e3e0714d4dd5e31ca701e07156f9bc6e 605 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 478 486 2.5E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Vc3S01_A0547 e3e0714d4dd5e31ca701e07156f9bc6e 605 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 388 407 2.5E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Vc3S01_A0547 e3e0714d4dd5e31ca701e07156f9bc6e 605 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 309 319 2.5E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Vc3S01_A0547 e3e0714d4dd5e31ca701e07156f9bc6e 605 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 328 335 2.5E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Vc3S01_A0547 e3e0714d4dd5e31ca701e07156f9bc6e 605 SUPERFAMILY SSF141673 6 133 3.66E-28 T 12-10-2018 Vc3S01_A0547 e3e0714d4dd5e31ca701e07156f9bc6e 605 SUPERFAMILY SSF52343 368 508 1.44E-35 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Vc3S01_A0547 e3e0714d4dd5e31ca701e07156f9bc6e 605 Gene3D G3DSA:3.40.50.80 378 511 5.1E-32 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Vc3S01_A0547 e3e0714d4dd5e31ca701e07156f9bc6e 605 Pfam PF03473 MOSC domain 139 262 1.1E-30 T 12-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 Vc3S01_A0547 e3e0714d4dd5e31ca701e07156f9bc6e 605 Gene3D G3DSA:3.10.20.30 512 605 2.5E-20 T 12-10-2018 IPR012675 Beta-grasp domain superfamily Vc3S01_A0547 e3e0714d4dd5e31ca701e07156f9bc6e 605 Pfam PF00175 Oxidoreductase NAD-binding domain 389 492 4.1E-17 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 Vc3S01_A0547 e3e0714d4dd5e31ca701e07156f9bc6e 605 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 535 597 5.8E-12 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Vc3S01_A0547 e3e0714d4dd5e31ca701e07156f9bc6e 605 Pfam PF00970 Oxidoreductase FAD-binding domain 283 378 1.5E-15 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 Vc3S01_A0547 e3e0714d4dd5e31ca701e07156f9bc6e 605 Gene3D G3DSA:2.40.33.20 138 280 6.3E-6 T 12-10-2018 Vc3S01_A0547 e3e0714d4dd5e31ca701e07156f9bc6e 605 SUPERFAMILY SSF50800 5 264 3.19E-15 T 12-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily Vc3S01_A0547 e3e0714d4dd5e31ca701e07156f9bc6e 605 SUPERFAMILY SSF54292 501 604 1.57E-25 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Vc3S01_A0547 e3e0714d4dd5e31ca701e07156f9bc6e 605 Gene3D G3DSA:2.40.30.10 281 377 6.2E-25 T 12-10-2018 Vc3S01_A0547 e3e0714d4dd5e31ca701e07156f9bc6e 605 SUPERFAMILY SSF63380 274 381 6.3E-26 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Vc3S01_A0547 e3e0714d4dd5e31ca701e07156f9bc6e 605 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 555 563 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 Vc3S01_A0547 e3e0714d4dd5e31ca701e07156f9bc6e 605 PRINTS PR00410 Phenol hydroxylase reductase family signature 309 321 1.4E-7 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Vc3S01_A0547 e3e0714d4dd5e31ca701e07156f9bc6e 605 PRINTS PR00410 Phenol hydroxylase reductase family signature 372 381 1.4E-7 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Vc3S01_A0547 e3e0714d4dd5e31ca701e07156f9bc6e 605 PRINTS PR00410 Phenol hydroxylase reductase family signature 388 407 1.4E-7 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Vc3S01_A0547 e3e0714d4dd5e31ca701e07156f9bc6e 605 PRINTS PR00410 Phenol hydroxylase reductase family signature 478 486 1.4E-7 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Vc3S01_1926 8578ca711f806f7d7c8e8dce23ea5e7b 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 7.1E-76 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Vc3S01_1926 8578ca711f806f7d7c8e8dce23ea5e7b 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 7.1E-76 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Vc3S01_1926 8578ca711f806f7d7c8e8dce23ea5e7b 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 7.1E-76 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Vc3S01_1926 8578ca711f806f7d7c8e8dce23ea5e7b 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 7.1E-76 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Vc3S01_1926 8578ca711f806f7d7c8e8dce23ea5e7b 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 7.1E-76 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Vc3S01_1926 8578ca711f806f7d7c8e8dce23ea5e7b 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 7.1E-76 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Vc3S01_1926 8578ca711f806f7d7c8e8dce23ea5e7b 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 7.1E-76 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Vc3S01_1926 8578ca711f806f7d7c8e8dce23ea5e7b 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 7.1E-76 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Vc3S01_1926 8578ca711f806f7d7c8e8dce23ea5e7b 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 7.1E-76 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Vc3S01_1926 8578ca711f806f7d7c8e8dce23ea5e7b 319 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 313 2.1E-123 T 12-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 Vc3S01_1926 8578ca711f806f7d7c8e8dce23ea5e7b 319 Gene3D G3DSA:3.50.50.60 10 312 3.4E-127 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_1926 8578ca711f806f7d7c8e8dce23ea5e7b 319 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 300 1.6E-45 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Vc3S01_1926 8578ca711f806f7d7c8e8dce23ea5e7b 319 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 12-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 Vc3S01_1926 8578ca711f806f7d7c8e8dce23ea5e7b 319 SUPERFAMILY SSF51905 2 313 7.22E-52 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_1926 8578ca711f806f7d7c8e8dce23ea5e7b 319 Gene3D G3DSA:3.50.50.60 118 244 3.4E-127 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_1926 8578ca711f806f7d7c8e8dce23ea5e7b 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 2.1E-38 T 12-10-2018 Vc3S01_1926 8578ca711f806f7d7c8e8dce23ea5e7b 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 2.1E-38 T 12-10-2018 Vc3S01_1926 8578ca711f806f7d7c8e8dce23ea5e7b 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 2.1E-38 T 12-10-2018 Vc3S01_1926 8578ca711f806f7d7c8e8dce23ea5e7b 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 2.1E-38 T 12-10-2018 Vc3S01_1926 8578ca711f806f7d7c8e8dce23ea5e7b 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 2.1E-38 T 12-10-2018 Vc3S01_0846 78348ab42d281780dc8fd2c9c8856a6b 670 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 11 107 1.6E-20 T 12-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 Vc3S01_0846 78348ab42d281780dc8fd2c9c8856a6b 670 Pfam PF07196 Flagellin hook IN motif 125 177 7.1E-8 T 12-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 Vc3S01_0846 78348ab42d281780dc8fd2c9c8856a6b 670 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 434 658 2.9E-55 T 12-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 Vc3S01_2434 2e83416b8907592b9bf767882f7512e9 305 Pfam PF08338 Domain of unknown function (DUF1731) 253 299 2.8E-14 T 12-10-2018 IPR013549 Domain of unknown function DUF1731 Vc3S01_2434 2e83416b8907592b9bf767882f7512e9 305 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 225 4.9E-25 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Vc3S01_2434 2e83416b8907592b9bf767882f7512e9 305 Gene3D G3DSA:3.40.50.720 2 304 3.4E-77 T 12-10-2018 Vc3S01_2434 2e83416b8907592b9bf767882f7512e9 305 SUPERFAMILY SSF51735 1 300 7.03E-46 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_2434 2e83416b8907592b9bf767882f7512e9 305 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 296 3.9E-102 T 12-10-2018 IPR010099 Epimerase family protein SDR39U1 Vc3S01_0139 a31c432807ff9df4681f3fd30bd661ed 624 Pfam PF07715 TonB-dependent Receptor Plug Domain 48 148 5.8E-25 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain Vc3S01_0139 a31c432807ff9df4681f3fd30bd661ed 624 Pfam PF00593 TonB dependent receptor 218 623 1.2E-42 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Vc3S01_0139 a31c432807ff9df4681f3fd30bd661ed 624 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 36 - T 12-10-2018 IPR010916 TonB box, conserved site Vc3S01_0139 a31c432807ff9df4681f3fd30bd661ed 624 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 607 624 - T 12-10-2018 IPR010917 TonB-dependent receptor, conserved site Vc3S01_0139 a31c432807ff9df4681f3fd30bd661ed 624 Hamap MF_01531 Vitamin B12 transporter BtuB [btuB]. 2 624 34.111 T 12-10-2018 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0015420|GO:0015889|GO:0016020 Vc3S01_0139 a31c432807ff9df4681f3fd30bd661ed 624 Gene3D G3DSA:2.40.170.20 157 624 3.8E-109 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Vc3S01_0139 a31c432807ff9df4681f3fd30bd661ed 624 SUPERFAMILY SSF56935 29 624 5.37E-104 T 12-10-2018 Vc3S01_0139 a31c432807ff9df4681f3fd30bd661ed 624 Gene3D G3DSA:2.170.130.10 20 153 8.4E-32 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Vc3S01_A1952 2b7a161eb1887992e317a661b8e13eb4 628 Gene3D G3DSA:3.30.450.20 53 269 1.8E-28 T 12-10-2018 Vc3S01_A1952 2b7a161eb1887992e317a661b8e13eb4 628 Gene3D G3DSA:1.10.287.950 296 628 2.5E-75 T 12-10-2018 Vc3S01_A1952 2b7a161eb1887992e317a661b8e13eb4 628 SMART SM00304 385 452 94.0 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Vc3S01_A1952 2b7a161eb1887992e317a661b8e13eb4 628 SMART SM00304 296 350 7.0E-12 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Vc3S01_A1952 2b7a161eb1887992e317a661b8e13eb4 628 SMART SM00283 365 626 2.0E-71 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Vc3S01_A1952 2b7a161eb1887992e317a661b8e13eb4 628 Gene3D G3DSA:3.30.450.20 66 171 1.8E-28 T 12-10-2018 Vc3S01_A1952 2b7a161eb1887992e317a661b8e13eb4 628 SUPERFAMILY SSF58104 318 627 6.28E-78 T 12-10-2018 Vc3S01_A1952 2b7a161eb1887992e317a661b8e13eb4 628 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 431 594 2.3E-40 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Vc3S01_A1952 2b7a161eb1887992e317a661b8e13eb4 628 Pfam PF02743 Cache domain 42 257 2.3E-23 T 12-10-2018 IPR033479 Double Cache domain 1 Vc3S01_A1952 2b7a161eb1887992e317a661b8e13eb4 628 Pfam PF00672 HAMP domain 300 347 2.6E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Vc3S01_2447 589015fdfae93210b050e16c41e1a814 304 ProSitePatterns PS01270 Band 7 protein family signature. 136 164 - T 12-10-2018 IPR018080 Band 7/stomatin-like, conserved site Vc3S01_2447 589015fdfae93210b050e16c41e1a814 304 Pfam PF01145 SPFH domain / Band 7 family 26 195 6.2E-34 T 12-10-2018 IPR001107 Band 7 domain Vc3S01_2447 589015fdfae93210b050e16c41e1a814 304 SUPERFAMILY SSF117892 53 187 9.42E-41 T 12-10-2018 IPR036013 Band 7/SPFH domain superfamily Vc3S01_2447 589015fdfae93210b050e16c41e1a814 304 SMART SM00244 22 180 1.7E-59 T 12-10-2018 IPR001107 Band 7 domain Vc3S01_2447 589015fdfae93210b050e16c41e1a814 304 PRINTS PR00721 Stomatin signature 175 196 2.3E-28 T 12-10-2018 IPR001972 Stomatin family GO:0016020 Vc3S01_2447 589015fdfae93210b050e16c41e1a814 304 PRINTS PR00721 Stomatin signature 132 155 2.3E-28 T 12-10-2018 IPR001972 Stomatin family GO:0016020 Vc3S01_2447 589015fdfae93210b050e16c41e1a814 304 PRINTS PR00721 Stomatin signature 77 98 2.3E-28 T 12-10-2018 IPR001972 Stomatin family GO:0016020 Vc3S01_2447 589015fdfae93210b050e16c41e1a814 304 PRINTS PR00721 Stomatin signature 112 129 2.3E-28 T 12-10-2018 IPR001972 Stomatin family GO:0016020 Vc3S01_2447 589015fdfae93210b050e16c41e1a814 304 PRINTS PR00721 Stomatin signature 156 174 2.3E-28 T 12-10-2018 IPR001972 Stomatin family GO:0016020 Vc3S01_2447 589015fdfae93210b050e16c41e1a814 304 Gene3D G3DSA:3.30.479.30 50 182 2.6E-42 T 12-10-2018 Vc3S01_1061 153d46bab47b40ffe68139ccfb4ad04e 314 SUPERFAMILY SSF52833 31 150 5.71E-17 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Vc3S01_1061 153d46bab47b40ffe68139ccfb4ad04e 314 PIRSF PIRSF015753 4 312 5.7E-136 T 12-10-2018 IPR016639 Glutathione S-transferase Omega/GSH GO:0004364 Vc3S01_1061 153d46bab47b40ffe68139ccfb4ad04e 314 Gene3D G3DSA:3.40.30.130 1 168 2.1E-65 T 12-10-2018 Vc3S01_1061 153d46bab47b40ffe68139ccfb4ad04e 314 Gene3D G3DSA:1.20.1050.10 169 314 2.5E-71 T 12-10-2018 Vc3S01_1061 153d46bab47b40ffe68139ccfb4ad04e 314 Pfam PF13410 Glutathione S-transferase, C-terminal domain 192 263 3.3E-14 T 12-10-2018 Vc3S01_1061 153d46bab47b40ffe68139ccfb4ad04e 314 Pfam PF13409 Glutathione S-transferase, N-terminal domain 56 146 1.9E-22 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Vc3S01_1061 153d46bab47b40ffe68139ccfb4ad04e 314 SUPERFAMILY SSF47616 164 312 4.59E-38 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Vc3S01_A1248 2b8024b0e3b8104af03846dc9ae70a00 325 Gene3D G3DSA:3.60.15.10 1 308 1.1E-83 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Vc3S01_A1248 2b8024b0e3b8104af03846dc9ae70a00 325 Pfam PF12706 Beta-lactamase superfamily domain 32 151 2.2E-12 T 12-10-2018 IPR001279 Metallo-beta-lactamase Vc3S01_A1248 2b8024b0e3b8104af03846dc9ae70a00 325 SUPERFAMILY SSF56281 1 306 2.84E-70 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Vc3S01_A1248 2b8024b0e3b8104af03846dc9ae70a00 325 SMART SM00849 19 247 1.2E-4 T 12-10-2018 IPR001279 Metallo-beta-lactamase Vc3S01_A1248 2b8024b0e3b8104af03846dc9ae70a00 325 Hamap MF_01818 Ribonuclease BN [rbn]. 1 308 32.881 T 12-10-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 Vc3S01_0328 5535257d2b31225bf4f66bb579f60fea 150 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 12-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_0328 5535257d2b31225bf4f66bb579f60fea 150 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 148 9.0E-55 T 12-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_0328 5535257d2b31225bf4f66bb579f60fea 150 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 148 2.4E-25 T 12-10-2018 IPR020069 Ribosomal protein L9, C-terminal Vc3S01_0328 5535257d2b31225bf4f66bb579f60fea 150 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 26.142 T 12-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_0328 5535257d2b31225bf4f66bb579f60fea 150 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 1.7E-21 T 12-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_0328 5535257d2b31225bf4f66bb579f60fea 150 Gene3D G3DSA:3.40.5.10 1 50 9.2E-24 T 12-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_0328 5535257d2b31225bf4f66bb579f60fea 150 Gene3D G3DSA:3.10.430.100 61 149 1.3E-30 T 12-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily Vc3S01_0328 5535257d2b31225bf4f66bb579f60fea 150 SUPERFAMILY SSF55653 60 148 1.02E-25 T 12-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily Vc3S01_0328 5535257d2b31225bf4f66bb579f60fea 150 SUPERFAMILY SSF55658 1 57 2.27E-19 T 12-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal Vc3S01_1963 95233b05bcd80cdc3ff71aeb00882185 481 Gene3D G3DSA:3.40.50.720 2 289 2.9E-33 T 12-10-2018 Vc3S01_1963 95233b05bcd80cdc3ff71aeb00882185 481 SUPERFAMILY SSF51735 1 295 5.32E-44 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_1963 95233b05bcd80cdc3ff71aeb00882185 481 Pfam PF11066 Protein of unknown function (DUF2867) 332 465 1.3E-12 T 12-10-2018 IPR021295 Protein of unknown function DUF2867 Vc3S01_1963 95233b05bcd80cdc3ff71aeb00882185 481 Pfam PF13460 NAD(P)H-binding 8 149 1.2E-13 T 12-10-2018 IPR016040 NAD(P)-binding domain Vc3S01_A0050 6f70ccc5d1194f923c25a7c3859c0a5b 567 SUPERFAMILY SSF51338 422 477 1.4E-5 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Vc3S01_A0050 6f70ccc5d1194f923c25a7c3859c0a5b 567 Hamap MF_01953 Urease subunit alpha [ureC]. 1 567 55.303 T 12-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Vc3S01_A0050 6f70ccc5d1194f923c25a7c3859c0a5b 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 333 349 2.8E-34 T 12-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Vc3S01_A0050 6f70ccc5d1194f923c25a7c3859c0a5b 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 294 311 2.8E-34 T 12-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Vc3S01_A0050 6f70ccc5d1194f923c25a7c3859c0a5b 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 427 440 2.8E-34 T 12-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Vc3S01_A0050 6f70ccc5d1194f923c25a7c3859c0a5b 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 401 416 2.8E-34 T 12-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Vc3S01_A0050 6f70ccc5d1194f923c25a7c3859c0a5b 567 Gene3D G3DSA:2.30.40.10 3 480 1.7E-292 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Vc3S01_A0050 6f70ccc5d1194f923c25a7c3859c0a5b 567 Pfam PF01979 Amidohydrolase family 124 455 1.0E-73 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Vc3S01_A0050 6f70ccc5d1194f923c25a7c3859c0a5b 567 Gene3D G3DSA:3.20.20.140 128 567 1.7E-292 T 12-10-2018 Vc3S01_A0050 6f70ccc5d1194f923c25a7c3859c0a5b 567 ProSitePatterns PS01120 Urease nickel ligands signature. 126 139 - T 12-10-2018 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Vc3S01_A0050 6f70ccc5d1194f923c25a7c3859c0a5b 567 SUPERFAMILY SSF51556 129 567 1.51E-191 T 12-10-2018 IPR032466 Metal-dependent hydrolase Vc3S01_A0050 6f70ccc5d1194f923c25a7c3859c0a5b 567 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 2 567 2.8E-285 T 12-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Vc3S01_A0050 6f70ccc5d1194f923c25a7c3859c0a5b 567 Pfam PF00449 Urease alpha-subunit, N-terminal domain 1 118 6.3E-56 T 12-10-2018 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Vc3S01_A0050 6f70ccc5d1194f923c25a7c3859c0a5b 567 SUPERFAMILY SSF51338 2 176 9.12E-61 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Vc3S01_A1722 7740e03e1a38d483a7fabfc15d42a5a5 334 Gene3D G3DSA:3.40.50.300 128 333 1.3E-75 T 12-10-2018 Vc3S01_A1722 7740e03e1a38d483a7fabfc15d42a5a5 334 Pfam PF17396 Domain of unknown function (DUF1611_N) Rossmann-like domain 45 124 4.7E-22 T 12-10-2018 IPR035402 Domain of unknown function DUF1611-N, Rossmann-like domain Vc3S01_A1722 7740e03e1a38d483a7fabfc15d42a5a5 334 Pfam PF07755 Domain of unknown function (DUF1611_C) P-loop domain 131 327 7.5E-74 T 12-10-2018 IPR035086 Domain of unknown function DUF1611, P-loop Vc3S01_A1722 7740e03e1a38d483a7fabfc15d42a5a5 334 Gene3D G3DSA:3.40.50.720 51 127 1.0E-18 T 12-10-2018 Vc3S01_A1722 7740e03e1a38d483a7fabfc15d42a5a5 334 SUPERFAMILY SSF52540 1 332 4.6E-103 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A1722 7740e03e1a38d483a7fabfc15d42a5a5 334 PIRSF PIRSF026760 3 334 3.0E-105 T 12-10-2018 IPR011669 Uncharacterised conserved protein UCP026760 Vc3S01_1681 583ac2de9a9b75981ec8f3d7cb38560b 553 Pfam PF00037 4Fe-4S binding domain 446 466 2.0E-5 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Vc3S01_1681 583ac2de9a9b75981ec8f3d7cb38560b 553 Pfam PF00037 4Fe-4S binding domain 419 435 1.5E-4 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Vc3S01_1681 583ac2de9a9b75981ec8f3d7cb38560b 553 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 420 431 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Vc3S01_1681 583ac2de9a9b75981ec8f3d7cb38560b 553 SUPERFAMILY SSF54862 143 504 7.62E-41 T 12-10-2018 Vc3S01_1681 583ac2de9a9b75981ec8f3d7cb38560b 553 Gene3D G3DSA:3.30.70.20 174 254 2.2E-12 T 12-10-2018 Vc3S01_1681 583ac2de9a9b75981ec8f3d7cb38560b 553 Gene3D G3DSA:3.30.70.20 413 482 2.1E-11 T 12-10-2018 Vc3S01_1681 583ac2de9a9b75981ec8f3d7cb38560b 553 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 451 462 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Vc3S01_1681 583ac2de9a9b75981ec8f3d7cb38560b 553 Pfam PF12838 4Fe-4S dicluster domain 185 231 1.2E-8 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Vc3S01_0031 005a2dc83c2a35333663a81c1f0f8ada 359 ProSitePatterns PS00617 RecF protein signature 1. 118 138 - T 12-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 Vc3S01_0031 005a2dc83c2a35333663a81c1f0f8ada 359 ProSitePatterns PS00618 RecF protein signature 2. 299 317 - T 12-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 Vc3S01_0031 005a2dc83c2a35333663a81c1f0f8ada 359 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 356 2.6E-120 T 12-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 Vc3S01_0031 005a2dc83c2a35333663a81c1f0f8ada 359 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 359 98.768 T 12-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 Vc3S01_0031 005a2dc83c2a35333663a81c1f0f8ada 359 Gene3D G3DSA:1.20.1050.90 121 298 8.2E-83 T 12-10-2018 Vc3S01_0031 005a2dc83c2a35333663a81c1f0f8ada 359 Gene3D G3DSA:3.40.50.300 8 332 8.2E-83 T 12-10-2018 Vc3S01_0031 005a2dc83c2a35333663a81c1f0f8ada 359 SUPERFAMILY SSF52540 1 344 9.02E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0031 005a2dc83c2a35333663a81c1f0f8ada 359 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 354 2.0E-37 T 12-10-2018 IPR003395 RecF/RecN/SMC, N-terminal Vc3S01_2174 5a6e4e18d8be10142c0a2393936ad4c0 651 Pfam PF12532 Protein of unknown function (DUF3732) 459 639 7.5E-47 T 12-10-2018 IPR022205 Protein of unknown function DUF3732 Vc3S01_2174 5a6e4e18d8be10142c0a2393936ad4c0 651 Gene3D G3DSA:3.40.50.300 2 277 6.9E-8 T 12-10-2018 Vc3S01_0967 6f11c6ec98b9e1414e0ed8caa7b7d956 75 SUPERFAMILY SSF158651 1 73 9.55E-29 T 12-10-2018 IPR023202 YejL-like superfamily Vc3S01_0967 6f11c6ec98b9e1414e0ed8caa7b7d956 75 Gene3D G3DSA:1.10.3390.10 1 75 1.1E-31 T 12-10-2018 IPR023202 YejL-like superfamily Vc3S01_0967 6f11c6ec98b9e1414e0ed8caa7b7d956 75 Hamap MF_00816 UPF0352 protein YejL [yejL]. 1 71 23.28 T 12-10-2018 IPR009857 Uncharacterised protein family UPF0352 Vc3S01_0967 6f11c6ec98b9e1414e0ed8caa7b7d956 75 Pfam PF07208 Protein of unknown function (DUF1414) 26 69 7.3E-20 T 12-10-2018 IPR009857 Uncharacterised protein family UPF0352 Vc3S01_0967 6f11c6ec98b9e1414e0ed8caa7b7d956 75 PIRSF PIRSF006188 1 72 2.6E-36 T 12-10-2018 IPR009857 Uncharacterised protein family UPF0352 Vc3S01_0967 6f11c6ec98b9e1414e0ed8caa7b7d956 75 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 1 69 3.0E-30 T 12-10-2018 IPR009857 Uncharacterised protein family UPF0352 Vc3S01_1813 24726aab02d01c8a76da08ba68abf1be 398 Pfam PF01391 Collagen triple helix repeat (20 copies) 215 270 1.5E-8 T 12-10-2018 IPR008160 Collagen triple helix repeat Vc3S01_1813 24726aab02d01c8a76da08ba68abf1be 398 Pfam PF01391 Collagen triple helix repeat (20 copies) 194 245 1.1E-7 T 12-10-2018 IPR008160 Collagen triple helix repeat Vc3S01_2492 f172817aaea09ad50da892bf111dae52 883 Gene3D G3DSA:2.60.40.10 818 882 7.7E-24 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_2492 f172817aaea09ad50da892bf111dae52 883 Pfam PF03174 Chitobiase/beta-hexosaminidase C-terminal domain 804 879 9.6E-28 T 12-10-2018 IPR004867 Chitobiase C-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 Vc3S01_2492 f172817aaea09ad50da892bf111dae52 883 Gene3D G3DSA:3.20.20.80 330 817 3.2E-166 T 12-10-2018 Vc3S01_2492 f172817aaea09ad50da892bf111dae52 883 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 211 329 2.6E-13 T 12-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal Vc3S01_2492 f172817aaea09ad50da892bf111dae52 883 Pfam PF03173 Putative carbohydrate binding domain 35 193 3.5E-62 T 12-10-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 Vc3S01_2492 f172817aaea09ad50da892bf111dae52 883 SUPERFAMILY SSF55545 208 331 9.27E-24 T 12-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 Vc3S01_2492 f172817aaea09ad50da892bf111dae52 883 SMART SM01081 34 195 1.1E-93 T 12-10-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 Vc3S01_2492 f172817aaea09ad50da892bf111dae52 883 SUPERFAMILY SSF81296 781 882 1.18E-37 T 12-10-2018 IPR014756 Immunoglobulin E-set Vc3S01_2492 f172817aaea09ad50da892bf111dae52 883 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 332 764 3.8E-109 T 12-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 Vc3S01_2492 f172817aaea09ad50da892bf111dae52 883 SUPERFAMILY SSF51445 332 772 1.73E-144 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily Vc3S01_2492 f172817aaea09ad50da892bf111dae52 883 Gene3D G3DSA:2.60.40.290 25 167 4.3E-56 T 12-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 Vc3S01_2492 f172817aaea09ad50da892bf111dae52 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 355 376 3.3E-48 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 Vc3S01_2492 f172817aaea09ad50da892bf111dae52 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 728 744 3.3E-48 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 Vc3S01_2492 f172817aaea09ad50da892bf111dae52 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 292 312 3.3E-48 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 Vc3S01_2492 f172817aaea09ad50da892bf111dae52 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 746 763 3.3E-48 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 Vc3S01_2492 f172817aaea09ad50da892bf111dae52 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 326 343 3.3E-48 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 Vc3S01_2492 f172817aaea09ad50da892bf111dae52 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 432 449 3.3E-48 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 Vc3S01_2492 f172817aaea09ad50da892bf111dae52 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 526 539 3.3E-48 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 Vc3S01_2492 f172817aaea09ad50da892bf111dae52 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 499 517 3.3E-48 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 Vc3S01_2492 f172817aaea09ad50da892bf111dae52 883 Gene3D G3DSA:3.30.379.10 204 329 4.0E-24 T 12-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 Vc3S01_2492 f172817aaea09ad50da892bf111dae52 883 SUPERFAMILY SSF49384 26 198 1.05E-65 T 12-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 Vc3S01_0597 43d3e97dc4494f681c13f33c66792e21 639 Gene3D G3DSA:3.30.379.10 131 258 5.0E-21 T 12-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 Vc3S01_0597 43d3e97dc4494f681c13f33c66792e21 639 Gene3D G3DSA:3.20.20.80 259 636 7.1E-137 T 12-10-2018 Vc3S01_0597 43d3e97dc4494f681c13f33c66792e21 639 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 139 256 2.0E-15 T 12-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal Vc3S01_0597 43d3e97dc4494f681c13f33c66792e21 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 283 304 4.9E-50 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 Vc3S01_0597 43d3e97dc4494f681c13f33c66792e21 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 217 237 4.9E-50 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 Vc3S01_0597 43d3e97dc4494f681c13f33c66792e21 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 589 606 4.9E-50 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 Vc3S01_0597 43d3e97dc4494f681c13f33c66792e21 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 402 420 4.9E-50 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 Vc3S01_0597 43d3e97dc4494f681c13f33c66792e21 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 571 587 4.9E-50 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 Vc3S01_0597 43d3e97dc4494f681c13f33c66792e21 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 424 437 4.9E-50 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 Vc3S01_0597 43d3e97dc4494f681c13f33c66792e21 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 254 271 4.9E-50 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 Vc3S01_0597 43d3e97dc4494f681c13f33c66792e21 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 353 370 4.9E-50 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 Vc3S01_0597 43d3e97dc4494f681c13f33c66792e21 639 PIRSF PIRSF001093 114 196 390.0 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 Vc3S01_0597 43d3e97dc4494f681c13f33c66792e21 639 PIRSF PIRSF001093 194 638 9.1E-96 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 Vc3S01_0597 43d3e97dc4494f681c13f33c66792e21 639 SUPERFAMILY SSF51445 260 620 6.62E-129 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily Vc3S01_0597 43d3e97dc4494f681c13f33c66792e21 639 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 260 607 1.3E-118 T 12-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 Vc3S01_0597 43d3e97dc4494f681c13f33c66792e21 639 SUPERFAMILY SSF55545 126 259 1.64E-23 T 12-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 Vc3S01_0979 26c44eaa6f14a4bdc77c10493a3a6834 194 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 82 3.4E-34 T 12-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Vc3S01_0979 26c44eaa6f14a4bdc77c10493a3a6834 194 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 158 165 - T 12-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Vc3S01_0979 26c44eaa6f14a4bdc77c10493a3a6834 194 SUPERFAMILY SSF54719 84 193 1.28E-43 T 12-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Vc3S01_0979 26c44eaa6f14a4bdc77c10493a3a6834 194 Gene3D G3DSA:2.40.500.20 83 194 9.0E-43 T 12-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Vc3S01_0979 26c44eaa6f14a4bdc77c10493a3a6834 194 SUPERFAMILY SSF46609 1 84 4.71E-35 T 12-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Vc3S01_0979 26c44eaa6f14a4bdc77c10493a3a6834 194 Gene3D G3DSA:1.10.287.990 20 82 7.3E-25 T 12-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Vc3S01_0979 26c44eaa6f14a4bdc77c10493a3a6834 194 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 190 7.4E-39 T 12-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Vc3S01_0979 26c44eaa6f14a4bdc77c10493a3a6834 194 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.5E-21 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Vc3S01_0979 26c44eaa6f14a4bdc77c10493a3a6834 194 PRINTS PR01703 Manganese superoxide dismutase signature 156 168 1.5E-21 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Vc3S01_0979 26c44eaa6f14a4bdc77c10493a3a6834 194 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.5E-21 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Vc3S01_0979 26c44eaa6f14a4bdc77c10493a3a6834 194 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 1.5E-21 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Vc3S01_0979 26c44eaa6f14a4bdc77c10493a3a6834 194 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 1.5E-21 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Vc3S01_0979 26c44eaa6f14a4bdc77c10493a3a6834 194 PIRSF PIRSF000349 1 194 1.1E-84 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Vc3S01_A2026 0f33a12b7da5f90c3e6a6bd771e31b2a 79 SMART SM00360 2 75 4.0E-21 T 12-10-2018 IPR000504 RNA recognition motif domain GO:0003676 Vc3S01_A2026 0f33a12b7da5f90c3e6a6bd771e31b2a 79 Gene3D G3DSA:3.30.70.330 1 79 5.5E-23 T 12-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily Vc3S01_A2026 0f33a12b7da5f90c3e6a6bd771e31b2a 79 SUPERFAMILY SSF54928 2 78 3.49E-23 T 12-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 Vc3S01_A2026 0f33a12b7da5f90c3e6a6bd771e31b2a 79 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 3 72 2.0E-18 T 12-10-2018 IPR000504 RNA recognition motif domain GO:0003676 Vc3S01_1951 388b0f4e6348c8df608000a64d8af403 259 Gene3D G3DSA:3.40.50.10490 69 251 4.8E-39 T 12-10-2018 Vc3S01_1951 388b0f4e6348c8df608000a64d8af403 259 SUPERFAMILY SSF53697 68 253 1.56E-39 T 12-10-2018 Vc3S01_1951 388b0f4e6348c8df608000a64d8af403 259 Pfam PF01418 Helix-turn-helix domain, rpiR family 2 51 2.9E-18 T 12-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 Vc3S01_1951 388b0f4e6348c8df608000a64d8af403 259 Pfam PF01380 SIS domain 99 227 5.5E-25 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Vc3S01_1951 388b0f4e6348c8df608000a64d8af403 259 Gene3D G3DSA:1.10.10.10 1 54 6.9E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_1951 388b0f4e6348c8df608000a64d8af403 259 SUPERFAMILY SSF46689 2 55 1.27E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_2858 882973cd1661b543f609aa649419d8e8 363 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 7 356 2.3E-136 T 12-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Vc3S01_2858 882973cd1661b543f609aa649419d8e8 363 Gene3D G3DSA:3.40.718.10 1 363 3.8E-157 T 12-10-2018 Vc3S01_2858 882973cd1661b543f609aa649419d8e8 363 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 248 267 - T 12-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 Vc3S01_2858 882973cd1661b543f609aa649419d8e8 363 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 6 360 51.357 T 12-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 Vc3S01_2858 882973cd1661b543f609aa649419d8e8 363 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 7 356 7.7E-165 T 12-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 Vc3S01_2858 882973cd1661b543f609aa649419d8e8 363 SMART SM01329 7 356 9.3E-204 T 12-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Vc3S01_2858 882973cd1661b543f609aa649419d8e8 363 SUPERFAMILY SSF53659 4 361 1.21E-123 T 12-10-2018 Vc3S01_A1377 2c3a5948ae9dcc630972f8eb988f493e 335 Gene3D G3DSA:1.10.260.40 3 60 4.9E-22 T 12-10-2018 Vc3S01_A1377 2c3a5948ae9dcc630972f8eb988f493e 335 Gene3D G3DSA:3.40.50.2300 70 323 7.4E-87 T 12-10-2018 Vc3S01_A1377 2c3a5948ae9dcc630972f8eb988f493e 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 4.7E-6 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Vc3S01_A1377 2c3a5948ae9dcc630972f8eb988f493e 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 4.7E-6 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Vc3S01_A1377 2c3a5948ae9dcc630972f8eb988f493e 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 46 3.1E-19 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Vc3S01_A1377 2c3a5948ae9dcc630972f8eb988f493e 335 Gene3D G3DSA:3.40.50.2300 162 291 7.4E-87 T 12-10-2018 Vc3S01_A1377 2c3a5948ae9dcc630972f8eb988f493e 335 Pfam PF13377 Periplasmic binding protein-like domain 171 331 1.6E-39 T 12-10-2018 Vc3S01_A1377 2c3a5948ae9dcc630972f8eb988f493e 335 SUPERFAMILY SSF53822 61 332 2.16E-92 T 12-10-2018 IPR028082 Periplasmic binding protein-like I Vc3S01_A1377 2c3a5948ae9dcc630972f8eb988f493e 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 12-10-2018 Vc3S01_A1377 2c3a5948ae9dcc630972f8eb988f493e 335 SMART SM00354 1 72 6.3E-34 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Vc3S01_A1377 2c3a5948ae9dcc630972f8eb988f493e 335 SUPERFAMILY SSF47413 1 60 1.31E-15 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Vc3S01_0076 1b1c6cbbc448b4178383d99877e80e0d 224 Pfam PF02592 Putative vitamin uptake transporter 43 199 6.7E-38 T 12-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 Vc3S01_0076 1b1c6cbbc448b4178383d99877e80e0d 224 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 13 204 2.1E-62 T 12-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 Vc3S01_0076 1b1c6cbbc448b4178383d99877e80e0d 224 Hamap MF_02088 Probable queuosine precursor transporter. 7 214 15.539 T 12-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 Vc3S01_2042 d5b72a959d3db214f033846f72470052 436 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 1 436 35.475 T 12-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 Vc3S01_2042 d5b72a959d3db214f033846f72470052 436 SMART SM00840 317 378 1.7E-26 T 12-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 Vc3S01_2042 d5b72a959d3db214f033846f72470052 436 SUPERFAMILY SSF47323 292 435 1.18E-39 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Vc3S01_2042 d5b72a959d3db214f033846f72470052 436 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 198 219 2.6E-29 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Vc3S01_2042 d5b72a959d3db214f033846f72470052 436 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 1 10 2.6E-29 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Vc3S01_2042 d5b72a959d3db214f033846f72470052 436 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 37 46 2.6E-29 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Vc3S01_2042 d5b72a959d3db214f033846f72470052 436 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 167 185 2.6E-29 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Vc3S01_2042 d5b72a959d3db214f033846f72470052 436 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 1 289 9.1E-139 T 12-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 Vc3S01_2042 d5b72a959d3db214f033846f72470052 436 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 1 435 5.1E-180 T 12-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 Vc3S01_2042 d5b72a959d3db214f033846f72470052 436 Pfam PF09190 DALR domain 317 378 4.6E-24 T 12-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 Vc3S01_2042 d5b72a959d3db214f033846f72470052 436 SUPERFAMILY SSF52374 1 289 2.43E-96 T 12-10-2018 Vc3S01_2042 d5b72a959d3db214f033846f72470052 436 Gene3D G3DSA:3.40.50.620 1 281 6.9E-129 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Vc3S01_2042 d5b72a959d3db214f033846f72470052 436 Gene3D G3DSA:1.20.120.640 282 436 1.6E-50 T 12-10-2018 Vc3S01_A0911 d9ca5f989820b3f49d089882e5be9643 215 Gene3D G3DSA:1.20.1050.10 84 191 9.3E-55 T 12-10-2018 Vc3S01_A0911 d9ca5f989820b3f49d089882e5be9643 215 Pfam PF13417 Glutathione S-transferase, N-terminal domain 9 77 8.0E-9 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Vc3S01_A0911 d9ca5f989820b3f49d089882e5be9643 215 SUPERFAMILY SSF47616 83 198 1.79E-13 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Vc3S01_A0911 d9ca5f989820b3f49d089882e5be9643 215 Gene3D G3DSA:3.40.30.10 6 195 9.3E-55 T 12-10-2018 Vc3S01_A0911 d9ca5f989820b3f49d089882e5be9643 215 SUPERFAMILY SSF52833 5 84 2.16E-15 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Vc3S01_A0527 63d0edcbf3104dda686bd90c76491874 350 Pfam PF13439 Glycosyltransferase Family 4 72 161 4.3E-13 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Vc3S01_A0527 63d0edcbf3104dda686bd90c76491874 350 SUPERFAMILY SSF53756 1 347 3.41E-72 T 12-10-2018 Vc3S01_A0527 63d0edcbf3104dda686bd90c76491874 350 Gene3D G3DSA:3.40.50.2000 177 335 4.3E-40 T 12-10-2018 Vc3S01_A0527 63d0edcbf3104dda686bd90c76491874 350 Pfam PF00534 Glycosyl transferases group 1 179 325 1.8E-33 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 Vc3S01_A0527 63d0edcbf3104dda686bd90c76491874 350 Gene3D G3DSA:3.40.50.2000 4 176 4.3E-15 T 12-10-2018 Vc3S01_A1124 0e886d2b438d863f64cf543ceaa6f4ea 368 Gene3D G3DSA:3.40.50.300 15 228 1.8E-53 T 12-10-2018 Vc3S01_A1124 0e886d2b438d863f64cf543ceaa6f4ea 368 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 3 358 1.7E-137 T 12-10-2018 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 Vc3S01_A1124 0e886d2b438d863f64cf543ceaa6f4ea 368 SMART SM00382 24 206 6.5E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_A1124 0e886d2b438d863f64cf543ceaa6f4ea 368 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_A1124 0e886d2b438d863f64cf543ceaa6f4ea 368 SUPERFAMILY SSF50331 235 358 4.89E-18 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Vc3S01_A1124 0e886d2b438d863f64cf543ceaa6f4ea 368 Pfam PF00005 ABC transporter 18 157 2.0E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_A1124 0e886d2b438d863f64cf543ceaa6f4ea 368 Pfam PF03459 TOBE domain 292 358 3.4E-15 T 12-10-2018 IPR005116 Transport-associated OB, type 1 Vc3S01_A1124 0e886d2b438d863f64cf543ceaa6f4ea 368 SUPERFAMILY SSF52540 13 236 2.01E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A1124 0e886d2b438d863f64cf543ceaa6f4ea 368 Gene3D G3DSA:2.40.50.100 290 359 1.1E-15 T 12-10-2018 Vc3S01_A0107 25b46b5cd198bb13d351ebd339ab9e09 317 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 232 296 5.1E-18 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Vc3S01_A0107 25b46b5cd198bb13d351ebd339ab9e09 317 Pfam PF00005 ABC transporter 24 180 6.1E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_A0107 25b46b5cd198bb13d351ebd339ab9e09 317 SMART SM00382 33 230 7.9E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_A0107 25b46b5cd198bb13d351ebd339ab9e09 317 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_A0107 25b46b5cd198bb13d351ebd339ab9e09 317 SUPERFAMILY SSF52540 4 251 1.06E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A0107 25b46b5cd198bb13d351ebd339ab9e09 317 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 231 316 1.8E-26 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Vc3S01_A0107 25b46b5cd198bb13d351ebd339ab9e09 317 Gene3D G3DSA:3.40.50.300 1 317 4.7E-93 T 12-10-2018 Vc3S01_0096 5553838faa5b9dcbc389dcdbed1c8c81 243 Pfam PF04340 Protein of unknown function, DUF484 15 225 5.6E-70 T 12-10-2018 IPR007435 Protein of unknown function DUF484 Vc3S01_0096 5553838faa5b9dcbc389dcdbed1c8c81 243 Gene3D G3DSA:3.30.450.40 52 228 4.3E-36 T 12-10-2018 IPR029016 GAF-like domain superfamily Vc3S01_2508 c999992c563a2fe8be574b1937a179a1 314 SUPERFAMILY SSF53271 69 306 3.6E-67 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like Vc3S01_2508 c999992c563a2fe8be574b1937a179a1 314 Pfam PF14572 Phosphoribosyl synthetase-associated domain 204 313 1.8E-31 T 12-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 Vc3S01_2508 c999992c563a2fe8be574b1937a179a1 314 SMART SM01400 4 121 2.0E-77 T 12-10-2018 Vc3S01_2508 c999992c563a2fe8be574b1937a179a1 314 Gene3D G3DSA:3.40.50.2020 7 302 7.4E-136 T 12-10-2018 Vc3S01_2508 c999992c563a2fe8be574b1937a179a1 314 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 1.4E-50 T 12-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 Vc3S01_2508 c999992c563a2fe8be574b1937a179a1 314 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 4 314 49.826 T 12-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 Vc3S01_2508 c999992c563a2fe8be574b1937a179a1 314 Gene3D G3DSA:3.40.50.2020 148 290 7.4E-136 T 12-10-2018 Vc3S01_2508 c999992c563a2fe8be574b1937a179a1 314 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 12-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 Vc3S01_2508 c999992c563a2fe8be574b1937a179a1 314 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 4 314 2.7E-125 T 12-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 Vc3S01_0359 b7955baf2fc6fbb45c87aba5fd932885 71 Pfam PF09583 Phage shock protein G (Phageshock_PspG) 1 63 2.4E-23 T 12-10-2018 IPR014318 Phage shock protein, PspG Vc3S01_0359 b7955baf2fc6fbb45c87aba5fd932885 71 TIGRFAM TIGR02975 phageshock_pspG: phage shock protein G 2 64 5.3E-22 T 12-10-2018 IPR014318 Phage shock protein, PspG Vc3S01_1828 6d8569c32ca786217dd2782dde371041 75 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 12-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 Vc3S01_1828 6d8569c32ca786217dd2782dde371041 75 SUPERFAMILY SSF52833 3 68 4.69E-13 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Vc3S01_1828 6d8569c32ca786217dd2782dde371041 75 Gene3D G3DSA:3.40.30.10 2 75 8.6E-16 T 12-10-2018 Vc3S01_1828 6d8569c32ca786217dd2782dde371041 75 Pfam PF00462 Glutaredoxin 4 60 5.6E-11 T 12-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 Vc3S01_A0529 809ae21fc4090beada6a7c5d688a89b2 726 Pfam PF13807 G-rich domain on putative tyrosine kinase 396 467 1.6E-10 T 12-10-2018 IPR032807 Tyrosine kinase, G-rich domain Vc3S01_A0529 809ae21fc4090beada6a7c5d688a89b2 726 Pfam PF13614 AAA domain 552 678 4.4E-14 T 12-10-2018 IPR025669 AAA domain Vc3S01_A0529 809ae21fc4090beada6a7c5d688a89b2 726 Gene3D G3DSA:3.40.50.300 464 726 3.0E-67 T 12-10-2018 Vc3S01_A0529 809ae21fc4090beada6a7c5d688a89b2 726 SUPERFAMILY SSF52540 540 717 1.57E-32 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A0529 809ae21fc4090beada6a7c5d688a89b2 726 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 523 718 4.4E-44 T 12-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 Vc3S01_A0529 809ae21fc4090beada6a7c5d688a89b2 726 Pfam PF02706 Chain length determinant protein 23 107 1.3E-10 T 12-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 Vc3S01_A0228 28bf1d758f5fab5382f2e399765af3b2 721 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 42 443 1.1E-97 T 12-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 Vc3S01_A0228 28bf1d758f5fab5382f2e399765af3b2 721 Gene3D G3DSA:2.130.10.120 111 445 8.4E-250 T 12-10-2018 Vc3S01_A0228 28bf1d758f5fab5382f2e399765af3b2 721 SUPERFAMILY SSF53474 455 699 9.18E-41 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_A0228 28bf1d758f5fab5382f2e399765af3b2 721 Pfam PF00326 Prolyl oligopeptidase family 504 719 3.3E-69 T 12-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 Vc3S01_A0228 28bf1d758f5fab5382f2e399765af3b2 721 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 542 561 8.4E-51 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Vc3S01_A0228 28bf1d758f5fab5382f2e399765af3b2 721 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 572 592 8.4E-51 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Vc3S01_A0228 28bf1d758f5fab5382f2e399765af3b2 721 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 630 645 8.4E-51 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Vc3S01_A0228 28bf1d758f5fab5382f2e399765af3b2 721 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 488 506 8.4E-51 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Vc3S01_A0228 28bf1d758f5fab5382f2e399765af3b2 721 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 648 670 8.4E-51 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Vc3S01_A0228 28bf1d758f5fab5382f2e399765af3b2 721 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 514 538 8.4E-51 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Vc3S01_A0228 28bf1d758f5fab5382f2e399765af3b2 721 Gene3D G3DSA:3.40.50.1820 60 713 8.4E-250 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_A0228 28bf1d758f5fab5382f2e399765af3b2 721 SUPERFAMILY SSF50993 39 451 3.92E-95 T 12-10-2018 Vc3S01_A0316 50a5ee88f2c28baad8dd0941e045fb2e 237 Pfam PF13144 Chaperone for flagella basal body P-ring formation 66 233 1.1E-41 T 12-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal Vc3S01_A0316 50a5ee88f2c28baad8dd0941e045fb2e 237 Gene3D G3DSA:2.30.30.760 178 237 4.5E-12 T 12-10-2018 Vc3S01_A0316 50a5ee88f2c28baad8dd0941e045fb2e 237 SMART SM00858 113 174 7.3E-5 T 12-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 Vc3S01_A0316 50a5ee88f2c28baad8dd0941e045fb2e 237 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 101 236 4.9E-38 T 12-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal Vc3S01_A2031 3578a0fc8b8daa446382d828c54f0dc4 270 Gene3D G3DSA:1.10.10.60 217 269 6.3E-15 T 12-10-2018 Vc3S01_A2031 3578a0fc8b8daa446382d828c54f0dc4 270 Pfam PF12833 Helix-turn-helix domain 189 267 4.7E-18 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_A2031 3578a0fc8b8daa446382d828c54f0dc4 270 SUPERFAMILY SSF51215 30 133 4.32E-5 T 12-10-2018 IPR037923 Transcription regulator HTH-like Vc3S01_A2031 3578a0fc8b8daa446382d828c54f0dc4 270 Gene3D G3DSA:1.10.10.60 169 216 2.3E-10 T 12-10-2018 Vc3S01_A2031 3578a0fc8b8daa446382d828c54f0dc4 270 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 235 250 3.5E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Vc3S01_A2031 3578a0fc8b8daa446382d828c54f0dc4 270 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 250 266 3.5E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Vc3S01_A2031 3578a0fc8b8daa446382d828c54f0dc4 270 SMART SM00342 183 266 8.9E-28 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_A2031 3578a0fc8b8daa446382d828c54f0dc4 270 SUPERFAMILY SSF46689 220 268 2.64E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_A2031 3578a0fc8b8daa446382d828c54f0dc4 270 SUPERFAMILY SSF46689 170 216 3.67E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_p30076 c73744dd23a9d3787cae8689b894ee42 455 Pfam PF14072 DNA-sulfur modification-associated 8 325 3.1E-66 T 12-10-2018 IPR017642 DNA sulphur modification protein DndB Vc3S01_p30076 c73744dd23a9d3787cae8689b894ee42 455 TIGRFAM TIGR03187 DGQHR: DGQHR domain 10 280 1.7E-59 T 12-10-2018 IPR017601 DGQHR-containing domain Vc3S01_1357 45ad2bb75e0fb747890a68826b362c8b 165 SUPERFAMILY SSF55729 12 147 3.85E-14 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_1357 45ad2bb75e0fb747890a68826b362c8b 165 Pfam PF13673 Acetyltransferase (GNAT) domain 85 151 1.0E-9 T 12-10-2018 IPR000182 GNAT domain Vc3S01_1357 45ad2bb75e0fb747890a68826b362c8b 165 Gene3D G3DSA:3.40.630.30 1 159 1.9E-44 T 12-10-2018 Vc3S01_A1750 dd2a43f143d0addc7b704ebb766fee7c 110 PRINTS PR00067 Catalase signature 101 110 1.8E-11 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Vc3S01_A1750 dd2a43f143d0addc7b704ebb766fee7c 110 PRINTS PR00067 Catalase signature 38 61 1.8E-11 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Vc3S01_A1750 dd2a43f143d0addc7b704ebb766fee7c 110 Pfam PF00199 Catalase 25 110 6.3E-32 T 12-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Vc3S01_A1750 dd2a43f143d0addc7b704ebb766fee7c 110 Gene3D G3DSA:1.10.8.510 24 67 8.4E-21 T 12-10-2018 Vc3S01_A1750 dd2a43f143d0addc7b704ebb766fee7c 110 ProSitePatterns PS00438 Catalase proximal active site signature. 61 77 - T 12-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Vc3S01_A1750 dd2a43f143d0addc7b704ebb766fee7c 110 Gene3D G3DSA:2.40.180.20 68 110 1.9E-13 T 12-10-2018 Vc3S01_A1750 dd2a43f143d0addc7b704ebb766fee7c 110 SUPERFAMILY SSF56634 20 110 3.93E-36 T 12-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Vc3S01_A0837 65306b8b30ae54340371ed60c83d9103 420 SUPERFAMILY SSF56935 22 420 5.49E-105 T 12-10-2018 Vc3S01_A0837 65306b8b30ae54340371ed60c83d9103 420 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 46 415 4.0E-96 T 12-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 Vc3S01_A0837 65306b8b30ae54340371ed60c83d9103 420 Pfam PF02264 LamB porin 24 420 2.7E-107 T 12-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 Vc3S01_A0837 65306b8b30ae54340371ed60c83d9103 420 Gene3D G3DSA:2.40.170.10 22 420 5.1E-115 T 12-10-2018 IPR036998 Porin, LamB-type superfamily GO:0015288|GO:0016020|GO:0034219 Vc3S01_2452 564aee2d3298729316ddad2f171bea77 670 Pfam PF14520 Helix-hairpin-helix domain 447 503 4.1E-4 T 12-10-2018 Vc3S01_2452 564aee2d3298729316ddad2f171bea77 670 SUPERFAMILY SSF52113 596 669 2.8E-18 T 12-10-2018 IPR036420 BRCT domain superfamily Vc3S01_2452 564aee2d3298729316ddad2f171bea77 670 Pfam PF12826 Helix-hairpin-helix motif 511 574 2.6E-23 T 12-10-2018 Vc3S01_2452 564aee2d3298729316ddad2f171bea77 670 Gene3D G3DSA:2.40.50.140 319 391 7.9E-34 T 12-10-2018 Vc3S01_2452 564aee2d3298729316ddad2f171bea77 670 SMART SM00292 595 670 1.7E-10 T 12-10-2018 IPR001357 BRCT domain Vc3S01_2452 564aee2d3298729316ddad2f171bea77 670 SMART SM00278 447 466 95.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Vc3S01_2452 564aee2d3298729316ddad2f171bea77 670 SMART SM00278 481 500 95.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Vc3S01_2452 564aee2d3298729316ddad2f171bea77 670 SMART SM00278 545 564 840.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Vc3S01_2452 564aee2d3298729316ddad2f171bea77 670 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 409 435 1.1E-10 T 12-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 Vc3S01_2452 564aee2d3298729316ddad2f171bea77 670 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 595 668 7.8E-14 T 12-10-2018 IPR001357 BRCT domain Vc3S01_2452 564aee2d3298729316ddad2f171bea77 670 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 5 319 1.4E-134 T 12-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 Vc3S01_2452 564aee2d3298729316ddad2f171bea77 670 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 116 145 - T 12-10-2018 IPR018239 NAD-dependent DNA ligase, active site Vc3S01_2452 564aee2d3298729316ddad2f171bea77 670 SUPERFAMILY SSF47781 404 585 2.37E-59 T 12-10-2018 IPR010994 RuvA domain 2-like Vc3S01_2452 564aee2d3298729316ddad2f171bea77 670 Gene3D G3DSA:3.40.50.10190 584 670 2.2E-27 T 12-10-2018 IPR036420 BRCT domain superfamily Vc3S01_2452 564aee2d3298729316ddad2f171bea77 670 SMART SM00532 4 449 2.5E-274 T 12-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 Vc3S01_2452 564aee2d3298729316ddad2f171bea77 670 SUPERFAMILY SSF56091 5 317 6.24E-124 T 12-10-2018 Vc3S01_2452 564aee2d3298729316ddad2f171bea77 670 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 323 399 3.6E-35 T 12-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 Vc3S01_2452 564aee2d3298729316ddad2f171bea77 670 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 12 665 8.5E-264 T 12-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 Vc3S01_2452 564aee2d3298729316ddad2f171bea77 670 Gene3D G3DSA:1.10.287.610 2 69 5.0E-28 T 12-10-2018 Vc3S01_2452 564aee2d3298729316ddad2f171bea77 670 Gene3D G3DSA:3.30.470.90 70 318 2.2E-102 T 12-10-2018 Vc3S01_2452 564aee2d3298729316ddad2f171bea77 670 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 332 347 - T 12-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site Vc3S01_2452 564aee2d3298729316ddad2f171bea77 670 PIRSF PIRSF001604 1 670 7.3E-255 T 12-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 Vc3S01_2452 564aee2d3298729316ddad2f171bea77 670 SUPERFAMILY SSF50249 319 400 2.06E-28 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Vc3S01_2452 564aee2d3298729316ddad2f171bea77 670 Gene3D G3DSA:1.10.150.20 433 505 2.6E-29 T 12-10-2018 Vc3S01_2452 564aee2d3298729316ddad2f171bea77 670 Gene3D G3DSA:1.10.150.20 507 583 9.3E-29 T 12-10-2018 Vc3S01_2452 564aee2d3298729316ddad2f171bea77 670 Hamap MF_01588 DNA ligase [ligA]. 3 669 53.223 T 12-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 Vc3S01_2452 564aee2d3298729316ddad2f171bea77 670 Gene3D G3DSA:2.20.70.80 392 432 1.8E-19 T 12-10-2018 Vc3S01_A1059 fbde4b3e448ccde269562649ba9b0a0c 262 SMART SM00052 16 255 8.1E-11 T 12-10-2018 IPR001633 EAL domain Vc3S01_A1059 fbde4b3e448ccde269562649ba9b0a0c 262 SUPERFAMILY SSF141868 28 257 5.75E-42 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_A1059 fbde4b3e448ccde269562649ba9b0a0c 262 Pfam PF00563 EAL domain 25 250 2.3E-41 T 12-10-2018 IPR001633 EAL domain Vc3S01_A1059 fbde4b3e448ccde269562649ba9b0a0c 262 Gene3D G3DSA:3.20.20.450 20 262 6.9E-42 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_A0145 25f890b274c406cf79e1d4dd8cf6e1c8 216 Gene3D G3DSA:2.160.20.80 3 216 1.4E-59 T 12-10-2018 Vc3S01_A0145 25f890b274c406cf79e1d4dd8cf6e1c8 216 SUPERFAMILY SSF141571 52 215 1.26E-36 T 12-10-2018 Vc3S01_A0145 25f890b274c406cf79e1d4dd8cf6e1c8 216 SUPERFAMILY SSF141571 4 48 6.67E-10 T 12-10-2018 Vc3S01_A0145 25f890b274c406cf79e1d4dd8cf6e1c8 216 Pfam PF00805 Pentapeptide repeats (8 copies) 17 46 5.9E-8 T 12-10-2018 IPR001646 Pentapeptide repeat Vc3S01_A0145 25f890b274c406cf79e1d4dd8cf6e1c8 216 Pfam PF00805 Pentapeptide repeats (8 copies) 120 156 2.9E-4 T 12-10-2018 IPR001646 Pentapeptide repeat Vc3S01_A0145 25f890b274c406cf79e1d4dd8cf6e1c8 216 Pfam PF13599 Pentapeptide repeats (9 copies) 52 104 1.0E-8 T 12-10-2018 IPR001646 Pentapeptide repeat Vc3S01_0035 2feeb54e7d7c652d67b1b365fbd2c188 693 Pfam PF05746 DALR anticodon binding domain 585 682 4.3E-10 T 12-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 Vc3S01_0035 2feeb54e7d7c652d67b1b365fbd2c188 693 SUPERFAMILY SSF109604 356 494 6.59E-12 T 12-10-2018 Vc3S01_0035 2feeb54e7d7c652d67b1b365fbd2c188 693 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 245 260 1.7E-35 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Vc3S01_0035 2feeb54e7d7c652d67b1b365fbd2c188 693 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 49 61 1.7E-35 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Vc3S01_0035 2feeb54e7d7c652d67b1b365fbd2c188 693 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 398 417 1.7E-35 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Vc3S01_0035 2feeb54e7d7c652d67b1b365fbd2c188 693 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 322 338 1.7E-35 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Vc3S01_0035 2feeb54e7d7c652d67b1b365fbd2c188 693 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 6 19 1.7E-35 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Vc3S01_0035 2feeb54e7d7c652d67b1b365fbd2c188 693 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 2 691 25.896 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Vc3S01_0035 2feeb54e7d7c652d67b1b365fbd2c188 693 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 5 554 9.0E-205 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Vc3S01_0035 2feeb54e7d7c652d67b1b365fbd2c188 693 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 3 692 1.8E-294 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Vc3S01_A0836 bd82b59062cdc54745eddfe259c9edfe 688 Pfam PF02449 Beta-galactosidase 19 392 3.9E-147 T 12-10-2018 IPR013529 Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Vc3S01_A0836 bd82b59062cdc54745eddfe259c9edfe 688 Gene3D G3DSA:3.20.20.80 4 398 3.1E-131 T 12-10-2018 Vc3S01_A0836 bd82b59062cdc54745eddfe259c9edfe 688 SUPERFAMILY SSF52317 400 618 1.69E-55 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Vc3S01_A0836 bd82b59062cdc54745eddfe259c9edfe 688 Pfam PF08533 Beta-galactosidase C-terminal domain 628 686 4.2E-7 T 12-10-2018 IPR013739 Beta-galactosidase C-terminal GO:0004565|GO:0006012 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Vc3S01_A0836 bd82b59062cdc54745eddfe259c9edfe 688 Gene3D G3DSA:3.40.50.880 399 624 2.0E-57 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Vc3S01_A0836 bd82b59062cdc54745eddfe259c9edfe 688 SUPERFAMILY SSF51445 14 371 7.46E-108 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily Vc3S01_A0836 bd82b59062cdc54745eddfe259c9edfe 688 Pfam PF08532 Beta-galactosidase trimerisation domain 402 618 1.3E-64 T 12-10-2018 IPR013738 Beta-galactosidase trimerisation GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Vc3S01_A0836 bd82b59062cdc54745eddfe259c9edfe 688 PIRSF PIRSF001084 6 687 1.0E-232 T 12-10-2018 IPR003476 Glycoside hydrolase, family 42 GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Vc3S01_A0836 bd82b59062cdc54745eddfe259c9edfe 688 Gene3D G3DSA:2.60.40.1180 627 687 1.6E-12 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta Vc3S01_1127 a4e1a4a439f730e4175ed0cfdfbcc7d0 94 Gene3D G3DSA:4.10.520.10 2 39 5.5E-12 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Vc3S01_1127 a4e1a4a439f730e4175ed0cfdfbcc7d0 94 Gene3D G3DSA:4.10.520.10 40 92 3.7E-29 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Vc3S01_1127 a4e1a4a439f730e4175ed0cfdfbcc7d0 94 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 12-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 Vc3S01_1127 a4e1a4a439f730e4175ed0cfdfbcc7d0 94 Pfam PF00216 Bacterial DNA-binding protein 1 91 6.2E-31 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Vc3S01_1127 a4e1a4a439f730e4175ed0cfdfbcc7d0 94 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 92 2.2E-49 T 12-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 Vc3S01_1127 a4e1a4a439f730e4175ed0cfdfbcc7d0 94 SMART SM00411 1 91 4.4E-43 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Vc3S01_1127 a4e1a4a439f730e4175ed0cfdfbcc7d0 94 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 1.2E-18 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Vc3S01_1127 a4e1a4a439f730e4175ed0cfdfbcc7d0 94 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 1.2E-18 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Vc3S01_1127 a4e1a4a439f730e4175ed0cfdfbcc7d0 94 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 1.2E-18 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Vc3S01_1127 a4e1a4a439f730e4175ed0cfdfbcc7d0 94 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 30.997 T 12-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 Vc3S01_1127 a4e1a4a439f730e4175ed0cfdfbcc7d0 94 SUPERFAMILY SSF47729 1 91 2.36E-30 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Vc3S01_0299 163b5565b48decf16ad5bf5e0c3457d2 106 Hamap MF_00744 Met repressor [metJ]. 1 105 34.758 T 12-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 Vc3S01_0299 163b5565b48decf16ad5bf5e0c3457d2 106 Gene3D G3DSA:1.10.140.10 2 105 4.7E-56 T 12-10-2018 IPR023453 Methionine repressor MetJ domain superfamily Vc3S01_0299 163b5565b48decf16ad5bf5e0c3457d2 106 ProDom PD020365 REPRESSOR MET BIOSYNTHESIS TRANSCRIPTION METJ METHIONINE REGULON DNA-BINDING REGULATORY AMINO-ACID 10 101 4.0E-49 T 12-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 Vc3S01_0299 163b5565b48decf16ad5bf5e0c3457d2 106 Pfam PF01340 Met Apo-repressor, MetJ 3 99 3.6E-59 T 12-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 Vc3S01_0299 163b5565b48decf16ad5bf5e0c3457d2 106 SUPERFAMILY SSF47598 3 104 8.67E-57 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Vc3S01_1878 d9e69ade2e696134c0b557da07bc726c 263 Gene3D G3DSA:2.50.20.10 25 261 9.6E-98 T 12-10-2018 Vc3S01_1878 d9e69ade2e696134c0b557da07bc726c 263 Pfam PF17131 Outer membrane lipoprotein-sorting protein 78 261 6.7E-67 T 12-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein Vc3S01_A0622 4e9e346380c4abeb8ea97d100c13a208 407 Gene3D G3DSA:1.10.287.470 100 128 1.4E-8 T 12-10-2018 Vc3S01_A0622 4e9e346380c4abeb8ea97d100c13a208 407 Gene3D G3DSA:2.40.50.100 249 281 2.8E-17 T 12-10-2018 Vc3S01_A0622 4e9e346380c4abeb8ea97d100c13a208 407 SUPERFAMILY SSF111369 199 295 1.83E-7 T 12-10-2018 Vc3S01_A0622 4e9e346380c4abeb8ea97d100c13a208 407 Gene3D G3DSA:2.40.50.100 72 99 1.4E-8 T 12-10-2018 Vc3S01_A0622 4e9e346380c4abeb8ea97d100c13a208 407 Gene3D G3DSA:2.40.30.170 282 331 2.8E-17 T 12-10-2018 Vc3S01_A0622 4e9e346380c4abeb8ea97d100c13a208 407 Gene3D G3DSA:1.10.287.470 183 248 2.8E-17 T 12-10-2018 Vc3S01_A0622 4e9e346380c4abeb8ea97d100c13a208 407 Pfam PF13533 Biotin-lipoyl like 72 110 1.1E-10 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain Vc3S01_A0622 4e9e346380c4abeb8ea97d100c13a208 407 SUPERFAMILY SSF111369 63 173 2.88E-7 T 12-10-2018 Vc3S01_2705 7c22975c5217ef84470212e5c8a062e8 321 Gene3D G3DSA:3.40.1010.20 101 202 5.3E-108 T 12-10-2018 Vc3S01_2705 7c22975c5217ef84470212e5c8a062e8 321 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 6 290 3.3E-98 T 12-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 Vc3S01_2705 7c22975c5217ef84470212e5c8a062e8 321 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 5 292 37.95 T 12-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 Vc3S01_2705 7c22975c5217ef84470212e5c8a062e8 321 Gene3D G3DSA:3.40.50.11270 16 100 5.3E-108 T 12-10-2018 Vc3S01_2705 7c22975c5217ef84470212e5c8a062e8 321 Gene3D G3DSA:3.40.1010.20 10 287 5.3E-108 T 12-10-2018 Vc3S01_2705 7c22975c5217ef84470212e5c8a062e8 321 Pfam PF02401 LytB protein 7 288 4.6E-92 T 12-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 Vc3S01_1198 b9cd2cb8af4416864cf14d2ee0897ac0 268 SUPERFAMILY SSF51366 1 266 1.41E-91 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Vc3S01_1198 b9cd2cb8af4416864cf14d2ee0897ac0 268 Pfam PF00290 Tryptophan synthase alpha chain 8 266 7.8E-101 T 12-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Vc3S01_1198 b9cd2cb8af4416864cf14d2ee0897ac0 268 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 263 3.6E-102 T 12-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Vc3S01_1198 b9cd2cb8af4416864cf14d2ee0897ac0 268 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 265 38.2 T 12-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Vc3S01_1198 b9cd2cb8af4416864cf14d2ee0897ac0 268 Gene3D G3DSA:3.20.20.70 1 268 3.5E-94 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_1198 b9cd2cb8af4416864cf14d2ee0897ac0 268 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 12-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Vc3S01_A1364 1013260986492d6e9b7f692e7cca3215 6211 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1817 1957 2.8E-57 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain Vc3S01_A1364 1013260986492d6e9b7f692e7cca3215 6211 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 816 956 2.1E-53 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain Vc3S01_A1364 1013260986492d6e9b7f692e7cca3215 6211 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 3425 3570 7.8E-42 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain Vc3S01_A1364 1013260986492d6e9b7f692e7cca3215 6211 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2103 2243 1.2E-53 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain Vc3S01_A1364 1013260986492d6e9b7f692e7cca3215 6211 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2675 2816 6.6E-54 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain Vc3S01_A1364 1013260986492d6e9b7f692e7cca3215 6211 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1102 1236 4.2E-54 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain Vc3S01_A1364 1013260986492d6e9b7f692e7cca3215 6211 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2821 2967 9.5E-43 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain Vc3S01_A1364 1013260986492d6e9b7f692e7cca3215 6211 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 512 671 6.5E-28 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain Vc3S01_A1364 1013260986492d6e9b7f692e7cca3215 6211 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1531 1671 8.8E-54 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain Vc3S01_A1364 1013260986492d6e9b7f692e7cca3215 6211 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2389 2529 5.5E-54 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain Vc3S01_A1364 1013260986492d6e9b7f692e7cca3215 6211 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 3272 3418 3.4E-45 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain Vc3S01_A1364 1013260986492d6e9b7f692e7cca3215 6211 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2246 2384 1.9E-54 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain Vc3S01_A1364 1013260986492d6e9b7f692e7cca3215 6211 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 3123 3264 3.9E-40 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain Vc3S01_A1364 1013260986492d6e9b7f692e7cca3215 6211 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 3575 3732 7.0E-49 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain Vc3S01_A1364 1013260986492d6e9b7f692e7cca3215 6211 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 959 1099 7.4E-56 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain Vc3S01_A1364 1013260986492d6e9b7f692e7cca3215 6211 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1674 1813 4.3E-55 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain Vc3S01_A1364 1013260986492d6e9b7f692e7cca3215 6211 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2532 2671 2.1E-55 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain Vc3S01_A1364 1013260986492d6e9b7f692e7cca3215 6211 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1960 2094 2.3E-54 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain Vc3S01_A1364 1013260986492d6e9b7f692e7cca3215 6211 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1388 1526 4.3E-55 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain Vc3S01_A1364 1013260986492d6e9b7f692e7cca3215 6211 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 673 812 9.2E-52 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain Vc3S01_A1364 1013260986492d6e9b7f692e7cca3215 6211 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2974 3121 1.2E-45 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain Vc3S01_A1364 1013260986492d6e9b7f692e7cca3215 6211 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1245 1385 9.9E-54 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain Vc3S01_A1364 1013260986492d6e9b7f692e7cca3215 6211 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 6077 6095 - T 12-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site Vc3S01_A1364 1013260986492d6e9b7f692e7cca3215 6211 PRINTS PR00313 NodO calcium binding signature 6069 6080 8.9E-6 T 12-10-2018 Vc3S01_A1364 1013260986492d6e9b7f692e7cca3215 6211 PRINTS PR00313 NodO calcium binding signature 6081 6089 8.9E-6 T 12-10-2018 Vc3S01_A1364 1013260986492d6e9b7f692e7cca3215 6211 PRINTS PR00313 NodO calcium binding signature 6099 6108 8.9E-6 T 12-10-2018 Vc3S01_A1364 1013260986492d6e9b7f692e7cca3215 6211 PRINTS PR00313 NodO calcium binding signature 6090 6098 8.9E-6 T 12-10-2018 Vc3S01_A1364 1013260986492d6e9b7f692e7cca3215 6211 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 6119 6208 2.0E-11 T 12-10-2018 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass Vc3S01_A1364 1013260986492d6e9b7f692e7cca3215 6211 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 6086 6104 - T 12-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site Vc3S01_A1364 1013260986492d6e9b7f692e7cca3215 6211 SUPERFAMILY SSF51120 5995 6141 2.49E-16 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal Vc3S01_A1364 1013260986492d6e9b7f692e7cca3215 6211 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 867 943 0.0033 T 12-10-2018 IPR010221 VCBS repeat Vc3S01_A1364 1013260986492d6e9b7f692e7cca3215 6211 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1853 1944 0.0011 T 12-10-2018 IPR010221 VCBS repeat Vc3S01_A1364 1013260986492d6e9b7f692e7cca3215 6211 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1000 1086 0.0016 T 12-10-2018 IPR010221 VCBS repeat Vc3S01_A1425 20ee9968479484053f9e190ffe1851fa 515 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 16 60 2.9E-6 T 12-10-2018 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal Vc3S01_A1425 20ee9968479484053f9e190ffe1851fa 515 Gene3D G3DSA:3.40.50.410 150 272 9.9E-7 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Vc3S01_A0199 0ec92ed09f0f8abbb0de03653e6ed811 199 Gene3D G3DSA:3.40.1280.10 1 199 9.0E-59 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Vc3S01_A0199 0ec92ed09f0f8abbb0de03653e6ed811 199 SUPERFAMILY SSF75217 1 198 1.96E-67 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases Vc3S01_A0199 0ec92ed09f0f8abbb0de03653e6ed811 199 Hamap MF_00587 tRNA (pseudouridine(54)-N(1))-methyltransferase [trmY]. 1 198 28.004 T 12-10-2018 IPR007158 tRNA (pseudouridine(54)-N(1))-methyltransferase, TrmY GO:0008175 Vc3S01_A0199 0ec92ed09f0f8abbb0de03653e6ed811 199 Pfam PF04013 Putative SAM-dependent RNA methyltransferase 1 198 4.7E-66 T 12-10-2018 IPR007158 tRNA (pseudouridine(54)-N(1))-methyltransferase, TrmY GO:0008175 Vc3S01_0626 60f8c5c7d2a8a09dfd762db631462b5b 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 235 250 1.0E-12 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Vc3S01_0626 60f8c5c7d2a8a09dfd762db631462b5b 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 96 110 1.0E-12 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Vc3S01_0626 60f8c5c7d2a8a09dfd762db631462b5b 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 175 194 1.0E-12 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Vc3S01_0626 60f8c5c7d2a8a09dfd762db631462b5b 446 Gene3D G3DSA:3.40.120.10 258 340 1.9E-59 T 12-10-2018 Vc3S01_0626 60f8c5c7d2a8a09dfd762db631462b5b 446 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 376 442 2.0E-12 T 12-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Vc3S01_0626 60f8c5c7d2a8a09dfd762db631462b5b 446 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 97 106 - T 12-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Vc3S01_0626 60f8c5c7d2a8a09dfd762db631462b5b 446 SUPERFAMILY SSF55957 358 444 2.09E-21 T 12-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Vc3S01_0626 60f8c5c7d2a8a09dfd762db631462b5b 446 SUPERFAMILY SSF53738 4 182 2.2E-48 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Vc3S01_0626 60f8c5c7d2a8a09dfd762db631462b5b 446 Gene3D G3DSA:3.40.120.10 176 363 1.9E-59 T 12-10-2018 Vc3S01_0626 60f8c5c7d2a8a09dfd762db631462b5b 446 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 158 255 6.8E-19 T 12-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Vc3S01_0626 60f8c5c7d2a8a09dfd762db631462b5b 446 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 4 445 46.766 T 12-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Vc3S01_0626 60f8c5c7d2a8a09dfd762db631462b5b 446 SUPERFAMILY SSF53738 259 365 4.32E-28 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Vc3S01_0626 60f8c5c7d2a8a09dfd762db631462b5b 446 Gene3D G3DSA:3.40.120.10 4 155 5.1E-49 T 12-10-2018 Vc3S01_0626 60f8c5c7d2a8a09dfd762db631462b5b 446 SUPERFAMILY SSF53738 157 257 2.12E-29 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Vc3S01_0626 60f8c5c7d2a8a09dfd762db631462b5b 446 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 5 136 1.4E-45 T 12-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Vc3S01_0626 60f8c5c7d2a8a09dfd762db631462b5b 446 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 8 443 1.2E-201 T 12-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Vc3S01_0626 60f8c5c7d2a8a09dfd762db631462b5b 446 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 259 368 2.3E-30 T 12-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Vc3S01_0626 60f8c5c7d2a8a09dfd762db631462b5b 446 Gene3D G3DSA:3.30.310.50 371 446 7.6E-25 T 12-10-2018 Vc3S01_2830 e8140b3e918df62089f69ee1cfb4672b 620 Gene3D G3DSA:1.10.10.10 459 535 2.6E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_2830 e8140b3e918df62089f69ee1cfb4672b 620 SUPERFAMILY SSF88946 115 453 9.81E-96 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Vc3S01_2830 e8140b3e918df62089f69ee1cfb4672b 620 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 579 605 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Vc3S01_2830 e8140b3e918df62089f69ee1cfb4672b 620 Pfam PF04542 Sigma-70 region 2 386 455 1.7E-21 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Vc3S01_2830 e8140b3e918df62089f69ee1cfb4672b 620 PRINTS PR00046 Major sigma-70 factor signature 434 442 3.2E-31 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Vc3S01_2830 e8140b3e918df62089f69ee1cfb4672b 620 PRINTS PR00046 Major sigma-70 factor signature 594 605 3.2E-31 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Vc3S01_2830 e8140b3e918df62089f69ee1cfb4672b 620 PRINTS PR00046 Major sigma-70 factor signature 558 570 3.2E-31 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Vc3S01_2830 e8140b3e918df62089f69ee1cfb4672b 620 PRINTS PR00046 Major sigma-70 factor signature 410 423 3.2E-31 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Vc3S01_2830 e8140b3e918df62089f69ee1cfb4672b 620 PRINTS PR00046 Major sigma-70 factor signature 579 594 3.2E-31 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Vc3S01_2830 e8140b3e918df62089f69ee1cfb4672b 620 Pfam PF04539 Sigma-70 region 3 465 540 1.3E-28 T 12-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 Vc3S01_2830 e8140b3e918df62089f69ee1cfb4672b 620 Gene3D G3DSA:1.10.220.120 1 64 2.5E-29 T 12-10-2018 Vc3S01_2830 e8140b3e918df62089f69ee1cfb4672b 620 SUPERFAMILY SSF88659 459 532 2.22E-20 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Vc3S01_2830 e8140b3e918df62089f69ee1cfb4672b 620 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 382 618 2.2E-120 T 12-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 Vc3S01_2830 e8140b3e918df62089f69ee1cfb4672b 620 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 4 619 46.104 T 12-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 Vc3S01_2830 e8140b3e918df62089f69ee1cfb4672b 620 Pfam PF03979 Sigma-70 factor, region 1.1 4 80 3.0E-28 T 12-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 Vc3S01_2830 e8140b3e918df62089f69ee1cfb4672b 620 Pfam PF00140 Sigma-70 factor, region 1.2 98 128 1.3E-12 T 12-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Vc3S01_2830 e8140b3e918df62089f69ee1cfb4672b 620 Pfam PF04546 Sigma-70, non-essential region 139 355 5.2E-67 T 12-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Vc3S01_2830 e8140b3e918df62089f69ee1cfb4672b 620 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 382 607 6.0E-38 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Vc3S01_2830 e8140b3e918df62089f69ee1cfb4672b 620 Pfam PF04545 Sigma-70, region 4 554 607 1.8E-19 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Vc3S01_2830 e8140b3e918df62089f69ee1cfb4672b 620 SUPERFAMILY SSF88659 516 618 9.38E-26 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Vc3S01_2830 e8140b3e918df62089f69ee1cfb4672b 620 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 410 423 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Vc3S01_2830 e8140b3e918df62089f69ee1cfb4672b 620 Gene3D G3DSA:1.10.601.10 113 455 2.9E-139 T 12-10-2018 Vc3S01_2830 e8140b3e918df62089f69ee1cfb4672b 620 Gene3D G3DSA:1.10.10.10 536 620 1.3E-36 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_1742 4cc2fd49df826868a3db29cc89fd0408 1000 SUPERFAMILY SSF52172 878 999 4.7E-38 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_1742 4cc2fd49df826868a3db29cc89fd0408 1000 SUPERFAMILY SSF47384 329 406 4.51E-21 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Vc3S01_1742 4cc2fd49df826868a3db29cc89fd0408 1000 SMART SM00387 453 569 2.1E-36 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_1742 4cc2fd49df826868a3db29cc89fd0408 1000 SMART SM00448 879 996 7.8E-39 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_1742 4cc2fd49df826868a3db29cc89fd0408 1000 SMART SM00448 716 833 3.8E-39 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_1742 4cc2fd49df826868a3db29cc89fd0408 1000 Gene3D G3DSA:3.30.565.10 406 568 3.7E-49 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_1742 4cc2fd49df826868a3db29cc89fd0408 1000 Gene3D G3DSA:3.40.50.2300 773 845 1.2E-22 T 12-10-2018 Vc3S01_1742 4cc2fd49df826868a3db29cc89fd0408 1000 Gene3D G3DSA:3.40.50.2300 937 999 3.0E-22 T 12-10-2018 Vc3S01_1742 4cc2fd49df826868a3db29cc89fd0408 1000 SUPERFAMILY SSF52172 716 838 2.13E-37 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_1742 4cc2fd49df826868a3db29cc89fd0408 1000 Pfam PF00072 Response regulator receiver domain 718 833 1.4E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_1742 4cc2fd49df826868a3db29cc89fd0408 1000 Pfam PF00072 Response regulator receiver domain 881 996 3.1E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_1742 4cc2fd49df826868a3db29cc89fd0408 1000 PRINTS PR00344 Bacterial sensor protein C-terminal signature 553 566 1.9E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_1742 4cc2fd49df826868a3db29cc89fd0408 1000 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 508 1.9E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_1742 4cc2fd49df826868a3db29cc89fd0408 1000 PRINTS PR00344 Bacterial sensor protein C-terminal signature 529 547 1.9E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_1742 4cc2fd49df826868a3db29cc89fd0408 1000 PRINTS PR00344 Bacterial sensor protein C-terminal signature 512 522 1.9E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_1742 4cc2fd49df826868a3db29cc89fd0408 1000 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 454 566 3.0E-29 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_1742 4cc2fd49df826868a3db29cc89fd0408 1000 Gene3D G3DSA:3.40.50.12330 872 936 3.1E-22 T 12-10-2018 Vc3S01_1742 4cc2fd49df826868a3db29cc89fd0408 1000 Gene3D G3DSA:3.40.50.12330 707 772 9.4E-20 T 12-10-2018 Vc3S01_1742 4cc2fd49df826868a3db29cc89fd0408 1000 SMART SM00388 341 406 2.0E-25 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_1742 4cc2fd49df826868a3db29cc89fd0408 1000 SUPERFAMILY SSF55874 395 565 5.5E-43 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_1742 4cc2fd49df826868a3db29cc89fd0408 1000 Gene3D G3DSA:1.10.287.130 305 404 5.8E-30 T 12-10-2018 Vc3S01_1742 4cc2fd49df826868a3db29cc89fd0408 1000 Pfam PF00512 His Kinase A (phospho-acceptor) domain 341 406 2.9E-20 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_2568 5b21829cb46f1480292545ded2ef2244 374 SUPERFAMILY SSF53597 155 366 1.09E-50 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Vc3S01_2568 5b21829cb46f1480292545ded2ef2244 374 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 157 368 2.4E-52 T 12-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 Vc3S01_2568 5b21829cb46f1480292545ded2ef2244 374 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 13 110 6.0E-20 T 12-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain Vc3S01_2568 5b21829cb46f1480292545ded2ef2244 374 Gene3D G3DSA:3.40.430.10 152 373 1.9E-62 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Vc3S01_2568 5b21829cb46f1480292545ded2ef2244 374 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 18 365 4.7E-122 T 12-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 Vc3S01_2568 5b21829cb46f1480292545ded2ef2244 374 PIRSF PIRSF006769 9 372 4.6E-118 T 12-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 Vc3S01_2568 5b21829cb46f1480292545ded2ef2244 374 SUPERFAMILY SSF53927 14 156 6.73E-49 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Vc3S01_2568 5b21829cb46f1480292545ded2ef2244 374 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 61 99 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 Vc3S01_2568 5b21829cb46f1480292545ded2ef2244 374 Gene3D G3DSA:3.40.140.10 3 151 1.5E-47 T 12-10-2018 Vc3S01_2568 5b21829cb46f1480292545ded2ef2244 374 Pfam PF01872 RibD C-terminal domain 158 361 5.7E-47 T 12-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 Vc3S01_0074 2a5895bf12ed2f2ddf7e0b9f9988c154 611 Pfam PF00271 Helicase conserved C-terminal domain 229 333 4.7E-20 T 12-10-2018 IPR001650 Helicase, C-terminal Vc3S01_0074 2a5895bf12ed2f2ddf7e0b9f9988c154 611 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 17 606 2.9E-251 T 12-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 Vc3S01_0074 2a5895bf12ed2f2ddf7e0b9f9988c154 611 SMART SM00956 414 517 1.7E-49 T 12-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 Vc3S01_0074 2a5895bf12ed2f2ddf7e0b9f9988c154 611 Gene3D G3DSA:1.10.150.80 526 610 4.2E-28 T 12-10-2018 Vc3S01_0074 2a5895bf12ed2f2ddf7e0b9f9988c154 611 Gene3D G3DSA:3.40.50.300 7 211 1.5E-80 T 12-10-2018 Vc3S01_0074 2a5895bf12ed2f2ddf7e0b9f9988c154 611 SMART SM00490 253 334 9.3E-29 T 12-10-2018 IPR001650 Helicase, C-terminal Vc3S01_0074 2a5895bf12ed2f2ddf7e0b9f9988c154 611 SUPERFAMILY SSF52540 211 458 1.42E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0074 2a5895bf12ed2f2ddf7e0b9f9988c154 611 Pfam PF00270 DEAD/DEAH box helicase 31 189 7.2E-18 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Vc3S01_0074 2a5895bf12ed2f2ddf7e0b9f9988c154 611 Gene3D G3DSA:1.10.10.10 409 519 5.6E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_0074 2a5895bf12ed2f2ddf7e0b9f9988c154 611 SUPERFAMILY SSF52540 17 202 1.36E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0074 2a5895bf12ed2f2ddf7e0b9f9988c154 611 SUPERFAMILY SSF47819 534 609 6.32E-26 T 12-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 Vc3S01_0074 2a5895bf12ed2f2ddf7e0b9f9988c154 611 Pfam PF00570 HRDC domain 537 603 2.5E-22 T 12-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 Vc3S01_0074 2a5895bf12ed2f2ddf7e0b9f9988c154 611 Pfam PF16124 RecQ zinc-binding 346 407 4.6E-18 T 12-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain Vc3S01_0074 2a5895bf12ed2f2ddf7e0b9f9988c154 611 Pfam PF09382 RQC domain 409 517 2.6E-35 T 12-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 Vc3S01_0074 2a5895bf12ed2f2ddf7e0b9f9988c154 611 Gene3D G3DSA:3.40.50.300 213 408 1.8E-60 T 12-10-2018 Vc3S01_0074 2a5895bf12ed2f2ddf7e0b9f9988c154 611 SMART SM00487 25 221 1.5E-27 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Vc3S01_0074 2a5895bf12ed2f2ddf7e0b9f9988c154 611 SMART SM00341 533 611 2.1E-22 T 12-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 Vc3S01_0074 2a5895bf12ed2f2ddf7e0b9f9988c154 611 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 19 466 1.9E-187 T 12-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 Vc3S01_A0640 4f1ee520bd28e60d87a6f2ba96fb2d45 333 SUPERFAMILY SSF46689 287 330 1.86E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_A0640 4f1ee520bd28e60d87a6f2ba96fb2d45 333 Gene3D G3DSA:1.10.10.60 235 333 5.1E-17 T 12-10-2018 Vc3S01_A0640 4f1ee520bd28e60d87a6f2ba96fb2d45 333 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 312 328 2.6E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Vc3S01_A0640 4f1ee520bd28e60d87a6f2ba96fb2d45 333 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 297 312 2.6E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Vc3S01_A0640 4f1ee520bd28e60d87a6f2ba96fb2d45 333 SMART SM00342 247 328 8.7E-14 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_A0640 4f1ee520bd28e60d87a6f2ba96fb2d45 333 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 29 195 2.3E-16 T 12-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal Vc3S01_A0640 4f1ee520bd28e60d87a6f2ba96fb2d45 333 Pfam PF12833 Helix-turn-helix domain 256 330 5.3E-13 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_A1589 8d9a081b7026788b41b8f7ff8466923b 334 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 12 192 2.1E-41 T 12-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain Vc3S01_A1589 8d9a081b7026788b41b8f7ff8466923b 334 Gene3D G3DSA:3.40.50.300 10 209 1.1E-47 T 12-10-2018 Vc3S01_A1589 8d9a081b7026788b41b8f7ff8466923b 334 SUPERFAMILY SSF52540 13 204 1.49E-25 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A0716 4e4c1f658460702f35efde6713230de3 104 Gene3D G3DSA:3.40.1440.10 3 100 3.4E-29 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Vc3S01_A0716 4e4c1f658460702f35efde6713230de3 104 Pfam PF01541 GIY-YIG catalytic domain 9 79 9.0E-18 T 12-10-2018 IPR000305 GIY-YIG endonuclease Vc3S01_A0716 4e4c1f658460702f35efde6713230de3 104 SUPERFAMILY SSF82771 8 79 1.7E-14 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Vc3S01_A0716 4e4c1f658460702f35efde6713230de3 104 SMART SM00465 8 86 1.0E-4 T 12-10-2018 IPR000305 GIY-YIG endonuclease Vc3S01_1724 3505aecb47f96ac1adde42b64b376341 509 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 351 360 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Vc3S01_1724 3505aecb47f96ac1adde42b64b376341 509 SUPERFAMILY SSF46689 454 500 9.41E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_1724 3505aecb47f96ac1adde42b64b376341 509 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 224 239 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Vc3S01_1724 3505aecb47f96ac1adde42b64b376341 509 Gene3D G3DSA:3.40.50.2300 1 129 3.2E-29 T 12-10-2018 Vc3S01_1724 3505aecb47f96ac1adde42b64b376341 509 Gene3D G3DSA:3.40.50.300 130 309 3.4E-64 T 12-10-2018 Vc3S01_1724 3505aecb47f96ac1adde42b64b376341 509 Pfam PF02954 Bacterial regulatory protein, Fis family 459 495 7.0E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Vc3S01_1724 3505aecb47f96ac1adde42b64b376341 509 Pfam PF00158 Sigma-54 interaction domain 139 304 1.4E-68 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Vc3S01_1724 3505aecb47f96ac1adde42b64b376341 509 SUPERFAMILY SSF52540 138 380 4.11E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_1724 3505aecb47f96ac1adde42b64b376341 509 Gene3D G3DSA:1.10.10.60 453 496 1.2E-7 T 12-10-2018 Vc3S01_1724 3505aecb47f96ac1adde42b64b376341 509 SMART SM00448 1 110 1.0E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_1724 3505aecb47f96ac1adde42b64b376341 509 Gene3D G3DSA:1.10.8.60 310 390 5.6E-24 T 12-10-2018 Vc3S01_1724 3505aecb47f96ac1adde42b64b376341 509 SMART SM00382 158 300 2.4E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_1724 3505aecb47f96ac1adde42b64b376341 509 Pfam PF00072 Response regulator receiver domain 1 110 1.3E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_1724 3505aecb47f96ac1adde42b64b376341 509 SUPERFAMILY SSF52172 1 182 8.11E-36 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_0515 88785a68e91ed6073a33f9b0d66f156a 320 Gene3D G3DSA:3.40.50.300 20 202 5.9E-51 T 12-10-2018 Vc3S01_0515 88785a68e91ed6073a33f9b0d66f156a 320 Gene3D G3DSA:3.30.300.20 204 318 2.0E-42 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta Vc3S01_0515 88785a68e91ed6073a33f9b0d66f156a 320 Pfam PF07650 KH domain 227 304 4.3E-21 T 12-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_0515 88785a68e91ed6073a33f9b0d66f156a 320 SUPERFAMILY SSF52540 29 224 2.12E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0515 88785a68e91ed6073a33f9b0d66f156a 320 TIGRFAM TIGR00436 era: GTP-binding protein Era 27 299 1.1E-109 T 12-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_0515 88785a68e91ed6073a33f9b0d66f156a 320 SUPERFAMILY SSF54814 200 316 2.35E-41 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Vc3S01_0515 88785a68e91ed6073a33f9b0d66f156a 320 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 26 187 3.7E-38 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Vc3S01_0515 88785a68e91ed6073a33f9b0d66f156a 320 Pfam PF01926 50S ribosome-binding GTPase 29 143 3.2E-23 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Vc3S01_0515 88785a68e91ed6073a33f9b0d66f156a 320 Hamap MF_00367 GTPase Era [era]. 24 316 35.595 T 12-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_0513 b050126220556490c30158bf2a9119c2 299 ProSitePatterns PS00760 Signal peptidases I lysine active site. 146 158 - T 12-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 Vc3S01_0513 b050126220556490c30158bf2a9119c2 299 ProSitePatterns PS00501 Signal peptidases I serine active site. 89 96 - T 12-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 Vc3S01_0513 b050126220556490c30158bf2a9119c2 299 Gene3D G3DSA:2.10.109.10 78 272 1.6E-75 T 12-10-2018 Vc3S01_0513 b050126220556490c30158bf2a9119c2 299 Pfam PF10502 Signal peptidase, peptidase S26 211 269 4.5E-8 T 12-10-2018 IPR019533 Peptidase S26 Vc3S01_0513 b050126220556490c30158bf2a9119c2 299 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 144 156 6.3E-27 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Vc3S01_0513 b050126220556490c30158bf2a9119c2 299 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 80 96 6.3E-27 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Vc3S01_0513 b050126220556490c30158bf2a9119c2 299 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 232 251 6.3E-27 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Vc3S01_0513 b050126220556490c30158bf2a9119c2 299 SUPERFAMILY SSF51306 78 298 1.31E-71 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Vc3S01_0513 b050126220556490c30158bf2a9119c2 299 Pfam PF00717 Peptidase S24-like 86 162 1.1E-21 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C Vc3S01_0513 b050126220556490c30158bf2a9119c2 299 Gene3D G3DSA:2.170.230.10 155 231 1.6E-75 T 12-10-2018 Vc3S01_0513 b050126220556490c30158bf2a9119c2 299 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 66 272 1.2E-47 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Vc3S01_0513 b050126220556490c30158bf2a9119c2 299 ProSitePatterns PS00761 Signal peptidases I signature 3. 237 250 - T 12-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 Vc3S01_0563 d64780737eacb767efde24debee9462b 561 SUPERFAMILY SSF52540 171 558 2.3E-93 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0563 d64780737eacb767efde24debee9462b 561 Gene3D G3DSA:3.40.50.300 290 560 1.3E-104 T 12-10-2018 Vc3S01_0563 d64780737eacb767efde24debee9462b 561 Gene3D G3DSA:3.30.300.160 67 140 1.3E-8 T 12-10-2018 Vc3S01_0563 d64780737eacb767efde24debee9462b 561 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 5 558 2.6E-237 T 12-10-2018 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 Vc3S01_0563 d64780737eacb767efde24debee9462b 561 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 383 397 - T 12-10-2018 IPR001482 Type II/IV secretion system protein Vc3S01_0563 d64780737eacb767efde24debee9462b 561 SUPERFAMILY SSF160246 2 140 4.71E-32 T 12-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily Vc3S01_0563 d64780737eacb767efde24debee9462b 561 Pfam PF00437 Type II/IV secretion system protein 188 455 3.1E-86 T 12-10-2018 IPR001482 Type II/IV secretion system protein Vc3S01_0563 d64780737eacb767efde24debee9462b 561 Gene3D G3DSA:3.30.450.90 153 288 1.1E-46 T 12-10-2018 Vc3S01_0563 d64780737eacb767efde24debee9462b 561 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 38 142 1.9E-16 T 12-10-2018 IPR007831 General secretory system II, protein E, N-terminal Vc3S01_2931 66f8c0e8dcfde5355e0ad79ff25dde83 105 SUPERFAMILY SSF50104 4 102 6.45E-34 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily Vc3S01_2931 66f8c0e8dcfde5355e0ad79ff25dde83 105 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 102 1.1E-22 T 12-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_2931 66f8c0e8dcfde5355e0ad79ff25dde83 105 Gene3D G3DSA:2.30.30.30 2 104 1.4E-39 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 Vc3S01_2931 66f8c0e8dcfde5355e0ad79ff25dde83 105 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 12-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_2931 66f8c0e8dcfde5355e0ad79ff25dde83 105 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 20.041 T 12-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_2931 66f8c0e8dcfde5355e0ad79ff25dde83 105 Pfam PF00467 KOW motif 8 37 7.8E-6 T 12-10-2018 IPR005824 KOW Vc3S01_2931 66f8c0e8dcfde5355e0ad79ff25dde83 105 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 8.2E-40 T 12-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_2931 66f8c0e8dcfde5355e0ad79ff25dde83 105 SMART SM00739 4 31 3.4E-4 T 12-10-2018 IPR005824 KOW Vc3S01_A1261 cdb0acfdc60f0689aeda48eafaed893b 179 Pfam PF01569 PAP2 superfamily 76 158 1.4E-14 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Vc3S01_A1261 cdb0acfdc60f0689aeda48eafaed893b 179 SUPERFAMILY SSF48317 24 164 2.22E-28 T 12-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily Vc3S01_A1261 cdb0acfdc60f0689aeda48eafaed893b 179 SMART SM00014 57 153 4.0E-6 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Vc3S01_A1261 cdb0acfdc60f0689aeda48eafaed893b 179 Gene3D G3DSA:1.20.144.10 78 164 5.1E-17 T 12-10-2018 Vc3S01_0595 08b2dc2623a6129d11163da59274b900 470 Gene3D G3DSA:3.40.120.10 1 170 3.6E-47 T 12-10-2018 Vc3S01_0595 08b2dc2623a6129d11163da59274b900 470 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 162 262 1.7E-24 T 12-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Vc3S01_0595 08b2dc2623a6129d11163da59274b900 470 Gene3D G3DSA:3.40.120.10 263 368 5.9E-60 T 12-10-2018 Vc3S01_0595 08b2dc2623a6129d11163da59274b900 470 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 267 378 1.1E-25 T 12-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Vc3S01_0595 08b2dc2623a6129d11163da59274b900 470 SUPERFAMILY SSF55957 374 466 4.97E-18 T 12-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Vc3S01_0595 08b2dc2623a6129d11163da59274b900 470 SUPERFAMILY SSF53738 250 379 2.59E-30 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Vc3S01_0595 08b2dc2623a6129d11163da59274b900 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 94 108 2.1E-11 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Vc3S01_0595 08b2dc2623a6129d11163da59274b900 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 214 227 2.1E-11 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Vc3S01_0595 08b2dc2623a6129d11163da59274b900 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 242 257 2.1E-11 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Vc3S01_0595 08b2dc2623a6129d11163da59274b900 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 180 199 2.1E-11 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Vc3S01_0595 08b2dc2623a6129d11163da59274b900 470 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 2 137 5.2E-38 T 12-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Vc3S01_0595 08b2dc2623a6129d11163da59274b900 470 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 417 466 7.6E-10 T 12-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Vc3S01_0595 08b2dc2623a6129d11163da59274b900 470 Gene3D G3DSA:3.40.120.10 171 365 5.9E-60 T 12-10-2018 Vc3S01_0595 08b2dc2623a6129d11163da59274b900 470 SUPERFAMILY SSF53738 2 187 8.05E-40 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Vc3S01_0595 08b2dc2623a6129d11163da59274b900 470 Gene3D G3DSA:3.30.310.50 369 469 3.3E-16 T 12-10-2018 Vc3S01_0493 559e7dc29d3f83085e9f5afa7c9c83ad 298 Hamap MF_00513 HTH-type transcriptional regulator ArgP [argP]. 1 298 53.881 T 12-10-2018 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria Vc3S01_0493 559e7dc29d3f83085e9f5afa7c9c83ad 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 63 6.5E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_0493 559e7dc29d3f83085e9f5afa7c9c83ad 298 Pfam PF03466 LysR substrate binding domain 94 274 1.3E-16 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_0493 559e7dc29d3f83085e9f5afa7c9c83ad 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.7E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_0493 559e7dc29d3f83085e9f5afa7c9c83ad 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.7E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_0493 559e7dc29d3f83085e9f5afa7c9c83ad 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.7E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_0493 559e7dc29d3f83085e9f5afa7c9c83ad 298 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 4 296 2.2E-107 T 12-10-2018 IPR017685 HTH-type transcriptional regulator ArgP Vc3S01_0493 559e7dc29d3f83085e9f5afa7c9c83ad 298 SUPERFAMILY SSF46785 4 112 7.18E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_0493 559e7dc29d3f83085e9f5afa7c9c83ad 298 Gene3D G3DSA:3.40.190.290 89 296 3.6E-65 T 12-10-2018 Vc3S01_0493 559e7dc29d3f83085e9f5afa7c9c83ad 298 Gene3D G3DSA:1.10.10.10 2 85 6.9E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_0493 559e7dc29d3f83085e9f5afa7c9c83ad 298 SUPERFAMILY SSF53850 94 295 7.42E-23 T 12-10-2018 Vc3S01_2854 c4a43832da29c3be07da2cbb451d46a1 182 Pfam PF01569 PAP2 superfamily 71 179 3.2E-19 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Vc3S01_2854 c4a43832da29c3be07da2cbb451d46a1 182 Gene3D G3DSA:1.20.144.10 96 181 1.3E-18 T 12-10-2018 Vc3S01_2854 c4a43832da29c3be07da2cbb451d46a1 182 SUPERFAMILY SSF48317 13 179 7.72E-38 T 12-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily Vc3S01_2854 c4a43832da29c3be07da2cbb451d46a1 182 SMART SM00014 68 177 2.8E-15 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Vc3S01_2232 dcb4525c3e58b45274dc0b85d99859d5 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 1.7E-27 T 12-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 Vc3S01_2232 dcb4525c3e58b45274dc0b85d99859d5 72 SMART SM00316 4 72 4.8E-6 T 12-10-2018 IPR022967 RNA-binding domain, S1 Vc3S01_2232 dcb4525c3e58b45274dc0b85d99859d5 72 SUPERFAMILY SSF50249 1 70 9.43E-29 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Vc3S01_2232 dcb4525c3e58b45274dc0b85d99859d5 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 1.5E-38 T 12-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 Vc3S01_2232 dcb4525c3e58b45274dc0b85d99859d5 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.238 T 12-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 Vc3S01_2232 dcb4525c3e58b45274dc0b85d99859d5 72 Gene3D G3DSA:2.40.50.140 1 72 8.4E-37 T 12-10-2018 Vc3S01_1710 d35214f1d95582b2f414aac02a71eeda 114 Pfam PF12290 Protein of unknown function (DUF3802) 2 110 2.6E-43 T 12-10-2018 IPR020979 Uncharacterised protein family A0KLC6 Vc3S01_A0027 736246cfab0d3d2accf85393c4bba557 553 SMART SM00283 291 552 2.2E-75 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Vc3S01_A0027 736246cfab0d3d2accf85393c4bba557 553 SUPERFAMILY SSF58104 244 553 2.49E-75 T 12-10-2018 Vc3S01_A0027 736246cfab0d3d2accf85393c4bba557 553 SMART SM01049 44 130 1.0E-21 T 12-10-2018 IPR033480 Single Cache domain 2 Vc3S01_A0027 736246cfab0d3d2accf85393c4bba557 553 Pfam PF17200 Single Cache domain 2 47 188 3.4E-29 T 12-10-2018 IPR033480 Single Cache domain 2 Vc3S01_A0027 736246cfab0d3d2accf85393c4bba557 553 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 336 518 4.7E-41 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Vc3S01_A0027 736246cfab0d3d2accf85393c4bba557 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 2 27 2.9E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Vc3S01_A0027 736246cfab0d3d2accf85393c4bba557 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 389 416 2.9E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Vc3S01_A0027 736246cfab0d3d2accf85393c4bba557 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 418 447 2.9E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Vc3S01_A0027 736246cfab0d3d2accf85393c4bba557 553 Gene3D G3DSA:1.10.287.950 221 553 9.8E-74 T 12-10-2018 Vc3S01_A0027 736246cfab0d3d2accf85393c4bba557 553 SMART SM00304 222 276 2.0E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Vc3S01_A0027 736246cfab0d3d2accf85393c4bba557 553 Gene3D G3DSA:3.30.450.20 29 202 7.7E-33 T 12-10-2018 Vc3S01_0222 351521bebf9a2daa07af45ee9dc80c0c 165 Pfam PF02308 MgtC family 19 141 3.2E-29 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Vc3S01_0222 351521bebf9a2daa07af45ee9dc80c0c 165 PRINTS PR01837 MgtC/SapB protein signature 95 119 9.1E-32 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Vc3S01_0222 351521bebf9a2daa07af45ee9dc80c0c 165 PRINTS PR01837 MgtC/SapB protein signature 22 41 9.1E-32 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Vc3S01_0222 351521bebf9a2daa07af45ee9dc80c0c 165 PRINTS PR01837 MgtC/SapB protein signature 68 90 9.1E-32 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Vc3S01_0222 351521bebf9a2daa07af45ee9dc80c0c 165 PRINTS PR01837 MgtC/SapB protein signature 41 59 9.1E-32 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Vc3S01_A0737 fec4ef1c31a045345fb3b98f97144f3a 829 SUPERFAMILY SSF53706 38 661 2.09E-201 T 12-10-2018 Vc3S01_A0737 fec4ef1c31a045345fb3b98f97144f3a 829 Pfam PF01568 Molydopterin dinucleotide binding domain 714 822 3.7E-27 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Vc3S01_A0737 fec4ef1c31a045345fb3b98f97144f3a 829 Hamap MF_01630 Periplasmic nitrate reductase [napA]. 1 828 32.514 T 12-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 Vc3S01_A0737 fec4ef1c31a045345fb3b98f97144f3a 829 SUPERFAMILY SSF50692 689 828 2.94E-42 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Vc3S01_A0737 fec4ef1c31a045345fb3b98f97144f3a 829 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 46 63 - T 12-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 Vc3S01_A0737 fec4ef1c31a045345fb3b98f97144f3a 829 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 2 828 0.0 T 12-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 Vc3S01_A0737 fec4ef1c31a045345fb3b98f97144f3a 829 Gene3D G3DSA:3.30.200.210 41 666 0.0 T 12-10-2018 Vc3S01_A0737 fec4ef1c31a045345fb3b98f97144f3a 829 Gene3D G3DSA:3.40.228.10 177 702 0.0 T 12-10-2018 Vc3S01_A0737 fec4ef1c31a045345fb3b98f97144f3a 829 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 42 94 1.9E-16 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Vc3S01_A0737 fec4ef1c31a045345fb3b98f97144f3a 829 Gene3D G3DSA:3.40.50.740 98 623 0.0 T 12-10-2018 Vc3S01_A0737 fec4ef1c31a045345fb3b98f97144f3a 829 Gene3D G3DSA:2.40.40.20 705 828 1.1E-45 T 12-10-2018 Vc3S01_A0737 fec4ef1c31a045345fb3b98f97144f3a 829 Pfam PF00384 Molybdopterin oxidoreductase 98 570 1.5E-88 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Vc3S01_A0737 fec4ef1c31a045345fb3b98f97144f3a 829 SMART SM00926 41 95 1.9E-13 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Vc3S01_A1169 fd09771b4d87b19292966a1e340c76f2 538 SMART SM00283 276 537 3.8E-59 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Vc3S01_A1169 fd09771b4d87b19292966a1e340c76f2 538 Pfam PF17200 Single Cache domain 2 40 186 3.5E-37 T 12-10-2018 IPR033480 Single Cache domain 2 Vc3S01_A1169 fd09771b4d87b19292966a1e340c76f2 538 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 324 501 1.4E-40 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Vc3S01_A1169 fd09771b4d87b19292966a1e340c76f2 538 SMART SM00304 209 261 4.3E-11 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Vc3S01_A1169 fd09771b4d87b19292966a1e340c76f2 538 Pfam PF00672 HAMP domain 210 257 1.2E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Vc3S01_A1169 fd09771b4d87b19292966a1e340c76f2 538 Gene3D G3DSA:3.30.450.20 37 185 3.2E-44 T 12-10-2018 Vc3S01_A1169 fd09771b4d87b19292966a1e340c76f2 538 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 403 432 2.0E-8 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Vc3S01_A1169 fd09771b4d87b19292966a1e340c76f2 538 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 304 333 2.0E-8 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Vc3S01_A1169 fd09771b4d87b19292966a1e340c76f2 538 SMART SM01049 35 127 3.2E-29 T 12-10-2018 IPR033480 Single Cache domain 2 Vc3S01_A1169 fd09771b4d87b19292966a1e340c76f2 538 SUPERFAMILY SSF58104 229 538 2.09E-69 T 12-10-2018 Vc3S01_A1169 fd09771b4d87b19292966a1e340c76f2 538 Gene3D G3DSA:1.10.287.950 208 538 2.0E-70 T 12-10-2018 Vc3S01_0891 d1958490c88540f0368ec95e88926d8c 420 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 18 420 3.6E-123 T 12-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) Vc3S01_0891 d1958490c88540f0368ec95e88926d8c 420 Gene3D G3DSA:2.40.160.60 27 420 1.0E-117 T 12-10-2018 Vc3S01_0891 d1958490c88540f0368ec95e88926d8c 420 SUPERFAMILY SSF56935 27 420 2.99E-90 T 12-10-2018 Vc3S01_A1976 07d2c0c8e98f1653589a88f3aae2aa57 522 SUPERFAMILY SSF52833 104 197 1.97E-23 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Vc3S01_A1976 07d2c0c8e98f1653589a88f3aae2aa57 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 317 325 6.1E-60 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Vc3S01_A1976 07d2c0c8e98f1653589a88f3aae2aa57 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 354 378 6.1E-60 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Vc3S01_A1976 07d2c0c8e98f1653589a88f3aae2aa57 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 214 236 6.1E-60 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Vc3S01_A1976 07d2c0c8e98f1653589a88f3aae2aa57 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 480 498 6.1E-60 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Vc3S01_A1976 07d2c0c8e98f1653589a88f3aae2aa57 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 339 351 6.1E-60 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Vc3S01_A1976 07d2c0c8e98f1653589a88f3aae2aa57 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 445 466 6.1E-60 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Vc3S01_A1976 07d2c0c8e98f1653589a88f3aae2aa57 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 246 261 6.1E-60 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Vc3S01_A1976 07d2c0c8e98f1653589a88f3aae2aa57 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 266 276 6.1E-60 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Vc3S01_A1976 07d2c0c8e98f1653589a88f3aae2aa57 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 406 422 6.1E-60 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Vc3S01_A1976 07d2c0c8e98f1653589a88f3aae2aa57 522 Pfam PF13192 Thioredoxin domain 120 194 5.7E-12 T 12-10-2018 IPR012336 Thioredoxin-like fold Vc3S01_A1976 07d2c0c8e98f1653589a88f3aae2aa57 522 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 346 366 - T 12-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 Vc3S01_A1976 07d2c0c8e98f1653589a88f3aae2aa57 522 SUPERFAMILY SSF51905 203 516 9.26E-49 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_A1976 07d2c0c8e98f1653589a88f3aae2aa57 522 SUPERFAMILY SSF52833 1 101 1.34E-26 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Vc3S01_A1976 07d2c0c8e98f1653589a88f3aae2aa57 522 Gene3D G3DSA:3.50.50.60 328 451 1.2E-104 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_A1976 07d2c0c8e98f1653589a88f3aae2aa57 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 470 492 6.0E-35 T 12-10-2018 Vc3S01_A1976 07d2c0c8e98f1653589a88f3aae2aa57 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 215 234 6.0E-35 T 12-10-2018 Vc3S01_A1976 07d2c0c8e98f1653589a88f3aae2aa57 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 316 334 6.0E-35 T 12-10-2018 Vc3S01_A1976 07d2c0c8e98f1653589a88f3aae2aa57 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 443 459 6.0E-35 T 12-10-2018 Vc3S01_A1976 07d2c0c8e98f1653589a88f3aae2aa57 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 358 376 6.0E-35 T 12-10-2018 Vc3S01_A1976 07d2c0c8e98f1653589a88f3aae2aa57 522 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 213 506 3.2E-41 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Vc3S01_A1976 07d2c0c8e98f1653589a88f3aae2aa57 522 PIRSF PIRSF000238 1 522 2.6E-254 T 12-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 Vc3S01_A1976 07d2c0c8e98f1653589a88f3aae2aa57 522 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 520 1.5E-247 T 12-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 Vc3S01_A1976 07d2c0c8e98f1653589a88f3aae2aa57 522 Gene3D G3DSA:3.50.50.60 213 510 1.2E-104 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_A1976 07d2c0c8e98f1653589a88f3aae2aa57 522 Gene3D G3DSA:3.40.30.80 1 200 3.8E-65 T 12-10-2018 Vc3S01_A0871 ff0fbe6893b4bcf4b67c2ea2c2c76aae 281 Gene3D G3DSA:3.90.226.10 14 214 3.1E-63 T 12-10-2018 Vc3S01_A0871 ff0fbe6893b4bcf4b67c2ea2c2c76aae 281 Gene3D G3DSA:1.10.12.10 217 280 9.1E-24 T 12-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal Vc3S01_A0871 ff0fbe6893b4bcf4b67c2ea2c2c76aae 281 SUPERFAMILY SSF52096 16 275 3.42E-72 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Vc3S01_A0871 ff0fbe6893b4bcf4b67c2ea2c2c76aae 281 Pfam PF00378 Enoyl-CoA hydratase/isomerase 26 273 3.6E-47 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 Vc3S01_1558 532b8dcee1b41b3a6df2e6449105eba9 256 Pfam PF01925 Sulfite exporter TauE/SafE 8 249 1.8E-37 T 12-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 Vc3S01_2077 12f8d8503e7341f7d0f345d224d8eca6 425 Gene3D G3DSA:3.90.1150.10 7 412 3.2E-171 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Vc3S01_2077 12f8d8503e7341f7d0f345d224d8eca6 425 Pfam PF00202 Aminotransferase class-III 24 418 1.6E-129 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Vc3S01_2077 12f8d8503e7341f7d0f345d224d8eca6 425 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 239 276 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Vc3S01_2077 12f8d8503e7341f7d0f345d224d8eca6 425 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 10 418 1.9E-179 T 12-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 Vc3S01_2077 12f8d8503e7341f7d0f345d224d8eca6 425 Gene3D G3DSA:3.40.640.10 58 327 3.2E-171 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Vc3S01_2077 12f8d8503e7341f7d0f345d224d8eca6 425 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 1 421 49.011 T 12-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 Vc3S01_2077 12f8d8503e7341f7d0f345d224d8eca6 425 SUPERFAMILY SSF53383 4 420 8.3E-138 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Vc3S01_2077 12f8d8503e7341f7d0f345d224d8eca6 425 PIRSF PIRSF000521 21 421 9.3E-37 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Vc3S01_A0796 3afc9d6e03e579276df1e13972caa86b 525 Pfam PF02743 Cache domain 30 308 3.6E-14 T 12-10-2018 IPR033479 Double Cache domain 1 Vc3S01_A0796 3afc9d6e03e579276df1e13972caa86b 525 SUPERFAMILY SSF103190 31 205 3.14E-49 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Vc3S01_A0796 3afc9d6e03e579276df1e13972caa86b 525 SUPERFAMILY SSF55073 367 523 5.1E-44 T 12-10-2018 IPR029787 Nucleotide cyclase Vc3S01_A0796 3afc9d6e03e579276df1e13972caa86b 525 Gene3D G3DSA:3.30.450.20 210 301 9.6E-8 T 12-10-2018 Vc3S01_A0796 3afc9d6e03e579276df1e13972caa86b 525 Gene3D G3DSA:3.30.450.20 76 206 3.6E-46 T 12-10-2018 Vc3S01_A0796 3afc9d6e03e579276df1e13972caa86b 525 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 361 523 7.6E-40 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A0796 3afc9d6e03e579276df1e13972caa86b 525 Gene3D G3DSA:3.30.70.270 356 524 1.8E-50 T 12-10-2018 Vc3S01_A0796 3afc9d6e03e579276df1e13972caa86b 525 Pfam PF00990 Diguanylate cyclase, GGDEF domain 362 520 3.1E-43 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A0796 3afc9d6e03e579276df1e13972caa86b 525 SUPERFAMILY SSF103190 211 314 6.75E-12 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Vc3S01_A0796 3afc9d6e03e579276df1e13972caa86b 525 SMART SM00267 351 524 7.0E-54 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_0371 102e1e7d3a7085475ddef60e935d1b48 1226 Gene3D G3DSA:3.10.196.10 909 1224 1.8E-144 T 12-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Vc3S01_0371 102e1e7d3a7085475ddef60e935d1b48 1226 Gene3D G3DSA:3.20.20.330 2 340 2.7E-130 T 12-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 Vc3S01_0371 102e1e7d3a7085475ddef60e935d1b48 1226 SUPERFAMILY SSF56507 903 1225 8.63E-131 T 12-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Vc3S01_0371 102e1e7d3a7085475ddef60e935d1b48 1226 Gene3D G3DSA:1.10.288.10 938 1094 1.8E-144 T 12-10-2018 Vc3S01_0371 102e1e7d3a7085475ddef60e935d1b48 1226 SUPERFAMILY SSF82282 8 400 4.71E-119 T 12-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 Vc3S01_0371 102e1e7d3a7085475ddef60e935d1b48 1226 SUPERFAMILY SSF47644 654 740 4.32E-29 T 12-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Vc3S01_0371 102e1e7d3a7085475ddef60e935d1b48 1226 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 940 1210 2.9E-123 T 12-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Vc3S01_0371 102e1e7d3a7085475ddef60e935d1b48 1226 TIGRFAM TIGR02082 metH: methionine synthase 13 1194 0.0 T 12-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Vc3S01_0371 102e1e7d3a7085475ddef60e935d1b48 1226 Gene3D G3DSA:3.40.50.280 745 896 9.7E-56 T 12-10-2018 Vc3S01_0371 102e1e7d3a7085475ddef60e935d1b48 1226 SUPERFAMILY SSF51717 357 631 1.22E-87 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Vc3S01_0371 102e1e7d3a7085475ddef60e935d1b48 1226 SUPERFAMILY SSF52242 745 895 3.79E-45 T 12-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 Vc3S01_0371 102e1e7d3a7085475ddef60e935d1b48 1226 Pfam PF02574 Homocysteine S-methyltransferase 18 325 8.2E-82 T 12-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 Vc3S01_0371 102e1e7d3a7085475ddef60e935d1b48 1226 Pfam PF00809 Pterin binding enzyme 361 599 1.7E-59 T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Vc3S01_0371 102e1e7d3a7085475ddef60e935d1b48 1226 SMART SM01018 658 741 7.5E-45 T 12-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Vc3S01_0371 102e1e7d3a7085475ddef60e935d1b48 1226 Pfam PF02310 B12 binding domain 749 842 4.7E-18 T 12-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Vc3S01_0371 102e1e7d3a7085475ddef60e935d1b48 1226 Gene3D G3DSA:3.20.20.20 341 643 2.6E-130 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Vc3S01_0371 102e1e7d3a7085475ddef60e935d1b48 1226 Gene3D G3DSA:1.10.1240.10 650 738 1.7E-40 T 12-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Vc3S01_0371 102e1e7d3a7085475ddef60e935d1b48 1226 PIRSF PIRSF000381 3 1197 0.0 T 12-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Vc3S01_0371 102e1e7d3a7085475ddef60e935d1b48 1226 Pfam PF02607 B12 binding domain 660 734 9.7E-26 T 12-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Vc3S01_1768 ec74075b58d4c053779e11ace3fe45cc 427 SUPERFAMILY SSF50182 192 259 9.15E-12 T 12-10-2018 IPR010920 LSM domain superfamily Vc3S01_1768 ec74075b58d4c053779e11ace3fe45cc 427 Pfam PF00924 Mechanosensitive ion channel 150 401 3.9E-42 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 Vc3S01_1768 ec74075b58d4c053779e11ace3fe45cc 427 Gene3D G3DSA:2.30.30.60 209 255 1.2E-6 T 12-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily Vc3S01_2000 843aababbd6987c6d27551a2b548ca02 509 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 218 231 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Vc3S01_2000 843aababbd6987c6d27551a2b548ca02 509 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 280 295 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Vc3S01_2000 843aababbd6987c6d27551a2b548ca02 509 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 471 488 7.7E-5 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Vc3S01_2000 843aababbd6987c6d27551a2b548ca02 509 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 488 508 7.7E-5 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Vc3S01_2000 843aababbd6987c6d27551a2b548ca02 509 Gene3D G3DSA:1.10.10.60 453 509 4.9E-10 T 12-10-2018 Vc3S01_2000 843aababbd6987c6d27551a2b548ca02 509 SUPERFAMILY SSF46689 459 507 8.51E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_2000 843aababbd6987c6d27551a2b548ca02 509 Gene3D G3DSA:3.40.50.300 180 364 2.9E-63 T 12-10-2018 Vc3S01_2000 843aababbd6987c6d27551a2b548ca02 509 Gene3D G3DSA:3.30.450.40 7 175 1.4E-14 T 12-10-2018 IPR029016 GAF-like domain superfamily Vc3S01_2000 843aababbd6987c6d27551a2b548ca02 509 SMART SM00065 21 170 3.7E-8 T 12-10-2018 IPR003018 GAF domain GO:0005515 Vc3S01_2000 843aababbd6987c6d27551a2b548ca02 509 Pfam PF02954 Bacterial regulatory protein, Fis family 469 500 4.6E-6 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Vc3S01_2000 843aababbd6987c6d27551a2b548ca02 509 SUPERFAMILY SSF55781 7 163 1.68E-17 T 12-10-2018 Vc3S01_2000 843aababbd6987c6d27551a2b548ca02 509 SMART SM00382 214 358 1.3E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_2000 843aababbd6987c6d27551a2b548ca02 509 Gene3D G3DSA:1.10.8.60 365 430 2.0E-15 T 12-10-2018 Vc3S01_2000 843aababbd6987c6d27551a2b548ca02 509 SUPERFAMILY SSF52540 193 437 8.06E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2000 843aababbd6987c6d27551a2b548ca02 509 Pfam PF00158 Sigma-54 interaction domain 195 361 2.8E-69 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Vc3S01_p20034 6841f934da851d07f77d2c6409fd65be 429 Gene3D G3DSA:3.30.70.270 8 160 3.5E-19 T 12-10-2018 Vc3S01_p20034 6841f934da851d07f77d2c6409fd65be 429 Gene3D G3DSA:1.10.150.20 172 235 1.5E-7 T 12-10-2018 Vc3S01_p20034 6841f934da851d07f77d2c6409fd65be 429 Gene3D G3DSA:2.30.40.20 23 73 3.5E-19 T 12-10-2018 Vc3S01_p20034 6841f934da851d07f77d2c6409fd65be 429 SUPERFAMILY SSF56672 5 238 9.78E-38 T 12-10-2018 Vc3S01_p20034 6841f934da851d07f77d2c6409fd65be 429 Pfam PF00817 impB/mucB/samB family 9 155 1.0E-14 T 12-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Vc3S01_1730 19d3458407cd94c280b3faeca7dbc535 375 Gene3D G3DSA:3.40.50.2000 203 351 3.3E-31 T 12-10-2018 Vc3S01_1730 19d3458407cd94c280b3faeca7dbc535 375 SUPERFAMILY SSF53756 11 373 1.83E-23 T 12-10-2018 Vc3S01_1730 19d3458407cd94c280b3faeca7dbc535 375 Pfam PF13692 Glycosyl transferases group 1 217 345 3.8E-9 T 12-10-2018 Vc3S01_A1968 bfb2f42031337ba4c3917b2253e34b9d 283 Gene3D G3DSA:1.10.10.60 173 280 9.2E-21 T 12-10-2018 Vc3S01_A1968 bfb2f42031337ba4c3917b2253e34b9d 283 SMART SM00342 192 275 1.3E-13 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_A1968 bfb2f42031337ba4c3917b2253e34b9d 283 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 259 275 5.7E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Vc3S01_A1968 bfb2f42031337ba4c3917b2253e34b9d 283 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 244 259 5.7E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Vc3S01_A1968 bfb2f42031337ba4c3917b2253e34b9d 283 SUPERFAMILY SSF51215 31 158 1.96E-9 T 12-10-2018 IPR037923 Transcription regulator HTH-like Vc3S01_A1968 bfb2f42031337ba4c3917b2253e34b9d 283 Pfam PF12833 Helix-turn-helix domain 199 277 2.5E-19 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_A1968 bfb2f42031337ba4c3917b2253e34b9d 283 SUPERFAMILY SSF46689 232 278 6.27E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_A1556 a608f41d082029b9181151d2ce49a747 422 Gene3D G3DSA:3.40.50.80 295 421 1.0E-16 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Vc3S01_A1556 a608f41d082029b9181151d2ce49a747 422 Pfam PF00175 Oxidoreductase NAD-binding domain 306 400 3.4E-5 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 Vc3S01_A1556 a608f41d082029b9181151d2ce49a747 422 SUPERFAMILY SSF63380 206 295 4.84E-17 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Vc3S01_A1556 a608f41d082029b9181151d2ce49a747 422 Gene3D G3DSA:2.40.30.10 198 293 3.7E-14 T 12-10-2018 Vc3S01_A1556 a608f41d082029b9181151d2ce49a747 422 Pfam PF08022 FAD-binding domain 217 294 2.5E-8 T 12-10-2018 IPR013112 FAD-binding 8 GO:0016491|GO:0055114 Vc3S01_A1556 a608f41d082029b9181151d2ce49a747 422 SUPERFAMILY SSF52343 297 417 3.14E-19 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Vc3S01_A1556 a608f41d082029b9181151d2ce49a747 422 Pfam PF01794 Ferric reductase like transmembrane component 22 158 2.8E-16 T 12-10-2018 IPR013130 Ferric reductase transmembrane component-like domain Vc3S01_A1428 063b442a7ec69d870859ac11869780a6 240 SUPERFAMILY SSF48452 38 118 2.66E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_A1428 063b442a7ec69d870859ac11869780a6 240 Gene3D G3DSA:1.25.40.10 164 234 1.3E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_A1428 063b442a7ec69d870859ac11869780a6 240 Pfam PF14559 Tetratricopeptide repeat 173 220 3.6E-10 T 12-10-2018 Vc3S01_A1428 063b442a7ec69d870859ac11869780a6 240 SUPERFAMILY SSF48452 91 219 3.38E-18 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_A1428 063b442a7ec69d870859ac11869780a6 240 Gene3D G3DSA:1.25.40.10 34 159 3.1E-14 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_3169 8e4cf0e53d3dfef27b9a9be7efcd6517 377 SUPERFAMILY SSF51246 299 373 3.3E-19 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Vc3S01_3169 8e4cf0e53d3dfef27b9a9be7efcd6517 377 SUPERFAMILY SSF52440 1 88 1.73E-16 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Vc3S01_3169 8e4cf0e53d3dfef27b9a9be7efcd6517 377 Pfam PF02222 ATP-grasp domain 101 274 8.4E-51 T 12-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type Vc3S01_3169 8e4cf0e53d3dfef27b9a9be7efcd6517 377 Gene3D G3DSA:3.30.470.20 92 343 6.9E-90 T 12-10-2018 Vc3S01_3169 8e4cf0e53d3dfef27b9a9be7efcd6517 377 SUPERFAMILY SSF56059 92 295 8.13E-55 T 12-10-2018 Vc3S01_3169 8e4cf0e53d3dfef27b9a9be7efcd6517 377 Gene3D G3DSA:3.40.50.20 1 80 3.2E-18 T 12-10-2018 Vc3S01_3169 8e4cf0e53d3dfef27b9a9be7efcd6517 377 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 2 350 3.2E-105 T 12-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 Vc3S01_3169 8e4cf0e53d3dfef27b9a9be7efcd6517 377 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 2 346 36.591 T 12-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 Vc3S01_3169 8e4cf0e53d3dfef27b9a9be7efcd6517 377 Gene3D G3DSA:3.30.1490.20 107 177 6.9E-90 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Vc3S01_2505 124dfff610009ef7ea412fde99e09806 418 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 154 2.0E-49 T 12-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Vc3S01_2505 124dfff610009ef7ea412fde99e09806 418 PIRSF PIRSF000445 1 418 1.0E-155 T 12-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Vc3S01_2505 124dfff610009ef7ea412fde99e09806 418 Gene3D G3DSA:3.40.50.720 159 311 2.5E-43 T 12-10-2018 Vc3S01_2505 124dfff610009ef7ea412fde99e09806 418 SUPERFAMILY SSF69742 1 156 4.97E-47 T 12-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Vc3S01_2505 124dfff610009ef7ea412fde99e09806 418 SUPERFAMILY SSF69075 315 416 5.89E-29 T 12-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Vc3S01_2505 124dfff610009ef7ea412fde99e09806 418 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 170 304 2.6E-48 T 12-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase Vc3S01_2505 124dfff610009ef7ea412fde99e09806 418 SUPERFAMILY SSF51735 160 313 3.85E-36 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_2505 124dfff610009ef7ea412fde99e09806 418 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 97 120 - T 12-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Vc3S01_2505 124dfff610009ef7ea412fde99e09806 418 Gene3D G3DSA:3.30.460.30 1 156 1.7E-55 T 12-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Vc3S01_2505 124dfff610009ef7ea412fde99e09806 418 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 415 2.7E-142 T 12-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Vc3S01_2505 124dfff610009ef7ea412fde99e09806 418 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 416 30.52 T 12-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Vc3S01_2505 124dfff610009ef7ea412fde99e09806 418 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 318 414 8.6E-24 T 12-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Vc3S01_2398 eadcc63a9cea16ffd2ec8dd60a44632b 236 Gene3D G3DSA:3.10.20.30 1 104 6.4E-33 T 12-10-2018 IPR012675 Beta-grasp domain superfamily Vc3S01_2398 eadcc63a9cea16ffd2ec8dd60a44632b 236 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 8 228 2.2E-85 T 12-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 Vc3S01_2398 eadcc63a9cea16ffd2ec8dd60a44632b 236 Gene3D G3DSA:1.10.1060.10 105 236 1.1E-55 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Vc3S01_2398 eadcc63a9cea16ffd2ec8dd60a44632b 236 SUPERFAMILY SSF46548 105 233 4.88E-40 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Vc3S01_2398 eadcc63a9cea16ffd2ec8dd60a44632b 236 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 147 158 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Vc3S01_2398 eadcc63a9cea16ffd2ec8dd60a44632b 236 Pfam PF13534 4Fe-4S dicluster domain 146 219 1.5E-10 T 12-10-2018 Vc3S01_2398 eadcc63a9cea16ffd2ec8dd60a44632b 236 SUPERFAMILY SSF54292 1 104 3.39E-29 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Vc3S01_2398 eadcc63a9cea16ffd2ec8dd60a44632b 236 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 5 109 1.4E-29 T 12-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 Vc3S01_2849 7edf281eaa2acfb3b5f265e9405ffb94 164 Gene3D G3DSA:3.30.70.1150 80 157 5.6E-28 T 12-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal Vc3S01_2849 7edf281eaa2acfb3b5f265e9405ffb94 164 SUPERFAMILY SSF55021 1 75 2.08E-22 T 12-10-2018 Vc3S01_2849 7edf281eaa2acfb3b5f265e9405ffb94 164 SUPERFAMILY SSF55021 79 162 6.51E-27 T 12-10-2018 Vc3S01_2849 7edf281eaa2acfb3b5f265e9405ffb94 164 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 159 1.6E-62 T 12-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 Vc3S01_2849 7edf281eaa2acfb3b5f265e9405ffb94 164 Pfam PF10369 Small subunit of acetolactate synthase 84 158 2.5E-25 T 12-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 Vc3S01_2849 7edf281eaa2acfb3b5f265e9405ffb94 164 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 75 2.0E-36 T 12-10-2018 Vc3S01_2849 7edf281eaa2acfb3b5f265e9405ffb94 164 Pfam PF13710 ACT domain 11 73 3.6E-18 T 12-10-2018 Vc3S01_2849 7edf281eaa2acfb3b5f265e9405ffb94 164 Gene3D G3DSA:3.30.70.260 1 78 8.4E-33 T 12-10-2018 Vc3S01_0659 1d11dc21d2c8870f98af47da4b3d248a 695 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 689 8.6E-291 T 12-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Vc3S01_0659 1d11dc21d2c8870f98af47da4b3d248a 695 Pfam PF03144 Elongation factor Tu domain 2 321 388 6.3E-16 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Vc3S01_0659 1d11dc21d2c8870f98af47da4b3d248a 695 Pfam PF00009 Elongation factor Tu GTP binding domain 6 277 1.9E-60 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Vc3S01_0659 1d11dc21d2c8870f98af47da4b3d248a 695 SUPERFAMILY SSF52540 3 277 1.48E-99 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0659 1d11dc21d2c8870f98af47da4b3d248a 695 SUPERFAMILY SSF54980 401 478 6.83E-21 T 12-10-2018 IPR035647 EF-G domain III/V-like Vc3S01_0659 1d11dc21d2c8870f98af47da4b3d248a 695 PRINTS PR00315 GTP-binding elongation factor signature 9 22 1.2E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Vc3S01_0659 1d11dc21d2c8870f98af47da4b3d248a 695 PRINTS PR00315 GTP-binding elongation factor signature 75 85 1.2E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Vc3S01_0659 1d11dc21d2c8870f98af47da4b3d248a 695 PRINTS PR00315 GTP-binding elongation factor signature 55 63 1.2E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Vc3S01_0659 1d11dc21d2c8870f98af47da4b3d248a 695 PRINTS PR00315 GTP-binding elongation factor signature 127 136 1.2E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Vc3S01_0659 1d11dc21d2c8870f98af47da4b3d248a 695 SUPERFAMILY SSF54211 476 595 1.26E-38 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Vc3S01_0659 1d11dc21d2c8870f98af47da4b3d248a 695 SUPERFAMILY SSF54980 600 690 8.63E-28 T 12-10-2018 IPR035647 EF-G domain III/V-like Vc3S01_0659 1d11dc21d2c8870f98af47da4b3d248a 695 SMART SM00889 477 595 3.1E-60 T 12-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 Vc3S01_0659 1d11dc21d2c8870f98af47da4b3d248a 695 Gene3D G3DSA:3.30.70.870 403 480 5.1E-26 T 12-10-2018 Vc3S01_0659 1d11dc21d2c8870f98af47da4b3d248a 695 Pfam PF00679 Elongation factor G C-terminus 597 683 1.0E-27 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like Vc3S01_0659 1d11dc21d2c8870f98af47da4b3d248a 695 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 176 1.3E-24 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Vc3S01_0659 1d11dc21d2c8870f98af47da4b3d248a 695 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site Vc3S01_0659 1d11dc21d2c8870f98af47da4b3d248a 695 SMART SM00838 597 684 3.3E-44 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like Vc3S01_0659 1d11dc21d2c8870f98af47da4b3d248a 695 Pfam PF03764 Elongation factor G, domain IV 476 594 2.2E-42 T 12-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 Vc3S01_0659 1d11dc21d2c8870f98af47da4b3d248a 695 SUPERFAMILY SSF50447 261 399 1.77E-31 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Vc3S01_0659 1d11dc21d2c8870f98af47da4b3d248a 695 Gene3D G3DSA:2.40.30.10 290 402 1.6E-36 T 12-10-2018 Vc3S01_0659 1d11dc21d2c8870f98af47da4b3d248a 695 Gene3D G3DSA:3.30.230.10 481 684 7.9E-81 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Vc3S01_0659 1d11dc21d2c8870f98af47da4b3d248a 695 Hamap MF_00054_B Elongation factor G [fusA]. 3 688 101.207 T 12-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Vc3S01_0659 1d11dc21d2c8870f98af47da4b3d248a 695 Gene3D G3DSA:3.40.50.300 1 289 2.3E-102 T 12-10-2018 Vc3S01_0659 1d11dc21d2c8870f98af47da4b3d248a 695 Gene3D G3DSA:3.30.70.240 601 671 7.9E-81 T 12-10-2018 Vc3S01_0659 1d11dc21d2c8870f98af47da4b3d248a 695 Pfam PF14492 Elongation Factor G, domain II 401 474 3.3E-29 T 12-10-2018 Vc3S01_0412 df83520777b58e9f3164b632597bf784 91 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 3 84 6.3E-22 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like Vc3S01_0412 df83520777b58e9f3164b632597bf784 91 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 41 56 - T 12-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site Vc3S01_0412 df83520777b58e9f3164b632597bf784 91 SUPERFAMILY SSF55594 4 90 6.41E-25 T 12-10-2018 IPR035895 HPr-like superfamily Vc3S01_0412 df83520777b58e9f3164b632597bf784 91 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 14 21 - T 12-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site Vc3S01_0412 df83520777b58e9f3164b632597bf784 91 PRINTS PR00107 Phosphocarrier protein signature 40 55 1.2E-9 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like Vc3S01_0412 df83520777b58e9f3164b632597bf784 91 PRINTS PR00107 Phosphocarrier protein signature 14 30 1.2E-9 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like Vc3S01_0412 df83520777b58e9f3164b632597bf784 91 PRINTS PR00107 Phosphocarrier protein signature 55 72 1.2E-9 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like Vc3S01_0412 df83520777b58e9f3164b632597bf784 91 Gene3D G3DSA:3.30.1340.10 1 85 4.4E-27 T 12-10-2018 IPR035895 HPr-like superfamily Vc3S01_0412 df83520777b58e9f3164b632597bf784 91 Pfam PF00381 PTS HPr component phosphorylation site 4 84 6.3E-24 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like Vc3S01_2941 f37197775e20ab8fed48a8bcbd919079 200 Pfam PF00573 Ribosomal protein L4/L1 family 12 197 1.3E-64 T 12-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 Vc3S01_2941 f37197775e20ab8fed48a8bcbd919079 200 Gene3D G3DSA:3.40.1370.10 5 200 2.2E-69 T 12-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 Vc3S01_2941 f37197775e20ab8fed48a8bcbd919079 200 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 12 197 1.2E-75 T 12-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_2941 f37197775e20ab8fed48a8bcbd919079 200 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 6 200 33.703 T 12-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_2941 f37197775e20ab8fed48a8bcbd919079 200 SUPERFAMILY SSF52166 9 199 1.23E-72 T 12-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 Vc3S01_3176 e35bf0ef218d41e6efd5db7102393da7 427 Pfam PF01189 16S rRNA methyltransferase RsmB/F 238 422 1.9E-69 T 12-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 Vc3S01_3176 e35bf0ef218d41e6efd5db7102393da7 427 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 313 324 - T 12-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 Vc3S01_3176 e35bf0ef218d41e6efd5db7102393da7 427 SUPERFAMILY SSF48013 1 146 1.15E-36 T 12-10-2018 IPR035926 NusB-like superfamily Vc3S01_3176 e35bf0ef218d41e6efd5db7102393da7 427 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 4 425 2.2E-154 T 12-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 Vc3S01_3176 e35bf0ef218d41e6efd5db7102393da7 427 Gene3D G3DSA:3.40.50.150 228 425 7.2E-71 T 12-10-2018 Vc3S01_3176 e35bf0ef218d41e6efd5db7102393da7 427 Gene3D G3DSA:3.30.70.1170 170 227 1.2E-26 T 12-10-2018 Vc3S01_3176 e35bf0ef218d41e6efd5db7102393da7 427 SUPERFAMILY SSF53335 139 425 4.11E-79 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Vc3S01_3176 e35bf0ef218d41e6efd5db7102393da7 427 Gene3D G3DSA:1.10.940.10 1 142 5.8E-45 T 12-10-2018 IPR035926 NusB-like superfamily Vc3S01_3176 e35bf0ef218d41e6efd5db7102393da7 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 248 258 1.1E-30 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Vc3S01_3176 e35bf0ef218d41e6efd5db7102393da7 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 407 424 1.1E-30 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Vc3S01_3176 e35bf0ef218d41e6efd5db7102393da7 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 314 326 1.1E-30 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Vc3S01_3176 e35bf0ef218d41e6efd5db7102393da7 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 219 233 1.1E-30 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Vc3S01_3176 e35bf0ef218d41e6efd5db7102393da7 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 364 380 1.1E-30 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Vc3S01_3176 e35bf0ef218d41e6efd5db7102393da7 427 Pfam PF01029 NusB family 1 123 1.3E-24 T 12-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 Vc3S01_3176 e35bf0ef218d41e6efd5db7102393da7 427 Gene3D G3DSA:1.10.287.730 143 169 2.1E-14 T 12-10-2018 Vc3S01_3082 a4296bf61d3b6b97fdb20e65deac72f2 180 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 1 173 16.59 T 12-10-2018 IPR007336 Der GTPase activator GO:0005096 Vc3S01_3082 a4296bf61d3b6b97fdb20e65deac72f2 180 Pfam PF04220 Der GTPase activator (YihI) 21 170 1.1E-45 T 12-10-2018 IPR007336 Der GTPase activator GO:0005096 Vc3S01_1287 44eea594e3e7bb930d94324837f4fb58 157 Pfam PF11163 Protein of unknown function (DUF2947) 3 154 3.0E-71 T 12-10-2018 IPR021334 Protein of unknown function DUF2947 Vc3S01_2431 d334621c80eb37c918d6f49d88fdac50 116 SUPERFAMILY SSF54913 1 102 6.12E-22 T 12-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Vc3S01_2431 d334621c80eb37c918d6f49d88fdac50 116 Gene3D G3DSA:3.30.70.120 1 103 3.6E-15 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Vc3S01_2431 d334621c80eb37c918d6f49d88fdac50 116 SMART SM00938 6 104 3.5E-6 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Vc3S01_0567 828c727fb4104e9eef4eba86df6cbed4 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 1.8E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Vc3S01_0567 828c727fb4104e9eef4eba86df6cbed4 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 1.8E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Vc3S01_0567 828c727fb4104e9eef4eba86df6cbed4 255 SMART SM00895 99 227 9.1E-19 T 12-10-2018 IPR011711 GntR, C-terminal Vc3S01_0567 828c727fb4104e9eef4eba86df6cbed4 255 Gene3D G3DSA:1.20.120.530 97 236 2.5E-26 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Vc3S01_0567 828c727fb4104e9eef4eba86df6cbed4 255 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 2.4E-25 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Vc3S01_0567 828c727fb4104e9eef4eba86df6cbed4 255 SUPERFAMILY SSF48008 98 235 6.28E-20 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Vc3S01_0567 828c727fb4104e9eef4eba86df6cbed4 255 Pfam PF07729 FCD domain 99 226 9.5E-18 T 12-10-2018 IPR011711 GntR, C-terminal Vc3S01_0567 828c727fb4104e9eef4eba86df6cbed4 255 SUPERFAMILY SSF46785 5 76 2.06E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_0567 828c727fb4104e9eef4eba86df6cbed4 255 SMART SM00345 15 74 9.1E-28 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Vc3S01_0567 828c727fb4104e9eef4eba86df6cbed4 255 Gene3D G3DSA:1.10.10.10 1 74 1.4E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_0699 4b8e348ff73975c6788ab9863eebac35 469 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 369 452 4.5E-20 T 12-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 Vc3S01_0699 4b8e348ff73975c6788ab9863eebac35 469 Gene3D G3DSA:3.30.1360.60 389 469 4.6E-27 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 Vc3S01_0699 4b8e348ff73975c6788ab9863eebac35 469 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 406 423 - T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 Vc3S01_0699 4b8e348ff73975c6788ab9863eebac35 469 Pfam PF00367 phosphotransferase system, EIIB 396 428 6.0E-11 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 Vc3S01_0699 4b8e348ff73975c6788ab9863eebac35 469 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 467 2.7E-182 T 12-10-2018 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0016021|GO:1904659 Vc3S01_0699 4b8e348ff73975c6788ab9863eebac35 469 SUPERFAMILY SSF55604 393 467 4.58E-20 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 Vc3S01_0699 4b8e348ff73975c6788ab9863eebac35 469 Pfam PF02378 Phosphotransferase system, EIIC 13 311 4.6E-75 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 Vc3S01_0416 ee744a0ce1a5eb6ea5b38a270e562327 491 Gene3D G3DSA:1.10.10.1330 132 253 3.8E-26 T 12-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily Vc3S01_0416 ee744a0ce1a5eb6ea5b38a270e562327 491 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 469 476 - T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Vc3S01_0416 ee744a0ce1a5eb6ea5b38a270e562327 491 PRINTS PR00045 Sigma-54 factor signature 406 417 7.8E-32 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Vc3S01_0416 ee744a0ce1a5eb6ea5b38a270e562327 491 PRINTS PR00045 Sigma-54 factor signature 464 482 7.8E-32 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Vc3S01_0416 ee744a0ce1a5eb6ea5b38a270e562327 491 PRINTS PR00045 Sigma-54 factor signature 202 219 7.8E-32 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Vc3S01_0416 ee744a0ce1a5eb6ea5b38a270e562327 491 PRINTS PR00045 Sigma-54 factor signature 390 402 7.8E-32 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Vc3S01_0416 ee744a0ce1a5eb6ea5b38a270e562327 491 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 49 5.9E-17 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Vc3S01_0416 ee744a0ce1a5eb6ea5b38a270e562327 491 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 488 2.2E-157 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Vc3S01_0416 ee744a0ce1a5eb6ea5b38a270e562327 491 Gene3D G3DSA:1.10.10.60 431 488 2.3E-23 T 12-10-2018 Vc3S01_0416 ee744a0ce1a5eb6ea5b38a270e562327 491 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 378 397 - T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Vc3S01_0416 ee744a0ce1a5eb6ea5b38a270e562327 491 Pfam PF04963 Sigma-54 factor, core binding domain 130 319 9.0E-61 T 12-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 Vc3S01_0416 ee744a0ce1a5eb6ea5b38a270e562327 491 PIRSF PIRSF000774 1 491 3.1E-152 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Vc3S01_0416 ee744a0ce1a5eb6ea5b38a270e562327 491 Pfam PF04552 Sigma-54, DNA binding domain 331 489 6.8E-72 T 12-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding Vc3S01_A0508 f66c3c1ccac1759c4a6927829f7ee19f 410 Gene3D G3DSA:1.10.441.10 169 321 2.0E-129 T 12-10-2018 Vc3S01_A0508 f66c3c1ccac1759c4a6927829f7ee19f 410 PIRSF PIRSF001480 18 410 6.8E-102 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Vc3S01_A0508 f66c3c1ccac1759c4a6927829f7ee19f 410 Pfam PF01238 Phosphomannose isomerase type I 23 367 3.4E-87 T 12-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Vc3S01_A0508 f66c3c1ccac1759c4a6927829f7ee19f 410 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 21 402 1.0E-88 T 12-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Vc3S01_A0508 f66c3c1ccac1759c4a6927829f7ee19f 410 SUPERFAMILY SSF51182 19 395 1.67E-104 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily Vc3S01_A0508 f66c3c1ccac1759c4a6927829f7ee19f 410 PRINTS PR00714 Phosphomannose isomerase type I signature 24 42 5.0E-69 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Vc3S01_A0508 f66c3c1ccac1759c4a6927829f7ee19f 410 PRINTS PR00714 Phosphomannose isomerase type I signature 52 67 5.0E-69 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Vc3S01_A0508 f66c3c1ccac1759c4a6927829f7ee19f 410 PRINTS PR00714 Phosphomannose isomerase type I signature 295 314 5.0E-69 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Vc3S01_A0508 f66c3c1ccac1759c4a6927829f7ee19f 410 PRINTS PR00714 Phosphomannose isomerase type I signature 276 295 5.0E-69 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Vc3S01_A0508 f66c3c1ccac1759c4a6927829f7ee19f 410 PRINTS PR00714 Phosphomannose isomerase type I signature 257 276 5.0E-69 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Vc3S01_A0508 f66c3c1ccac1759c4a6927829f7ee19f 410 PRINTS PR00714 Phosphomannose isomerase type I signature 145 168 5.0E-69 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Vc3S01_A0508 f66c3c1ccac1759c4a6927829f7ee19f 410 PRINTS PR00714 Phosphomannose isomerase type I signature 241 256 5.0E-69 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Vc3S01_A0508 f66c3c1ccac1759c4a6927829f7ee19f 410 PRINTS PR00714 Phosphomannose isomerase type I signature 100 121 5.0E-69 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Vc3S01_A0508 f66c3c1ccac1759c4a6927829f7ee19f 410 Gene3D G3DSA:2.60.120.10 26 296 2.0E-129 T 12-10-2018 IPR014710 RmlC-like jelly roll fold Vc3S01_A0508 f66c3c1ccac1759c4a6927829f7ee19f 410 ProSitePatterns PS00966 Phosphomannose isomerase type I signature 2. 276 301 - T 12-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Vc3S01_A0508 f66c3c1ccac1759c4a6927829f7ee19f 410 Gene3D G3DSA:2.60.120.10 322 402 2.0E-129 T 12-10-2018 IPR014710 RmlC-like jelly roll fold Vc3S01_A0508 f66c3c1ccac1759c4a6927829f7ee19f 410 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 145 153 - T 12-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Vc3S01_A0727 0435440f631be915637ba29bcfac89f0 300 Pfam PF07549 SecD/SecF GG Motif 29 55 8.0E-9 T 12-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site Vc3S01_A0727 0435440f631be915637ba29bcfac89f0 300 PRINTS PR01755 Bacterial translocase SecF protein signature 145 159 3.5E-24 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Vc3S01_A0727 0435440f631be915637ba29bcfac89f0 300 PRINTS PR01755 Bacterial translocase SecF protein signature 225 240 3.5E-24 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Vc3S01_A0727 0435440f631be915637ba29bcfac89f0 300 PRINTS PR01755 Bacterial translocase SecF protein signature 193 211 3.5E-24 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Vc3S01_A0727 0435440f631be915637ba29bcfac89f0 300 PRINTS PR01755 Bacterial translocase SecF protein signature 34 49 3.5E-24 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Vc3S01_A0727 0435440f631be915637ba29bcfac89f0 300 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 35 276 4.2E-63 T 12-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 Vc3S01_A0727 0435440f631be915637ba29bcfac89f0 300 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 7 287 21.823 T 12-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 Vc3S01_A0727 0435440f631be915637ba29bcfac89f0 300 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 108 274 9.0E-46 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Vc3S01_A0727 0435440f631be915637ba29bcfac89f0 300 Pfam PF02355 Protein export membrane protein 101 284 5.2E-54 T 12-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial Vc3S01_A0727 0435440f631be915637ba29bcfac89f0 300 SUPERFAMILY SSF82866 80 283 1.31E-34 T 12-10-2018 Vc3S01_A0727 0435440f631be915637ba29bcfac89f0 300 Gene3D G3DSA:1.20.1640.10 95 290 4.1E-9 T 12-10-2018 Vc3S01_2994 eba8d6f83f10ee139a46514367bf3f06 345 Gene3D G3DSA:3.40.50.2000 165 344 1.2E-58 T 12-10-2018 Vc3S01_2994 eba8d6f83f10ee139a46514367bf3f06 345 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 3 341 1.8E-148 T 12-10-2018 IPR011910 ADP-heptose--LPS heptosyltransferase 2 GO:0009103|GO:0016757 Vc3S01_2994 eba8d6f83f10ee139a46514367bf3f06 345 SUPERFAMILY SSF53756 2 341 7.06E-98 T 12-10-2018 Vc3S01_2994 eba8d6f83f10ee139a46514367bf3f06 345 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 70 325 2.5E-68 T 12-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 Vc3S01_2994 eba8d6f83f10ee139a46514367bf3f06 345 Gene3D G3DSA:3.40.50.2000 2 150 1.2E-52 T 12-10-2018 Vc3S01_0358 09b18fb572ebfd5041b37e5c59949f8e 315 Pfam PF01207 Dihydrouridine synthase (Dus) 1 304 4.7E-93 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 Vc3S01_0358 09b18fb572ebfd5041b37e5c59949f8e 315 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 1 309 7.8E-158 T 12-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 Vc3S01_0358 09b18fb572ebfd5041b37e5c59949f8e 315 SUPERFAMILY SSF51395 1 308 2.3E-71 T 12-10-2018 Vc3S01_0358 09b18fb572ebfd5041b37e5c59949f8e 315 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 1 311 50.405 T 12-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 Vc3S01_0358 09b18fb572ebfd5041b37e5c59949f8e 315 Gene3D G3DSA:3.20.20.70 1 234 5.6E-69 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_0358 09b18fb572ebfd5041b37e5c59949f8e 315 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 76 94 - T 12-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 Vc3S01_0358 09b18fb572ebfd5041b37e5c59949f8e 315 PIRSF PIRSF006621 1 312 1.6E-71 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 Vc3S01_0358 09b18fb572ebfd5041b37e5c59949f8e 315 Gene3D G3DSA:1.20.120.1460 238 314 1.5E-23 T 12-10-2018 Vc3S01_2291 3166f44acf5fbddb375ea119b6284ead 144 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 34 134 5.4E-43 T 12-10-2018 IPR039366 YscW/ExsB Vc3S01_p10041 7ad5f7fe31114f4cfaee0897a8cffbfb 736 SUPERFAMILY SSF57783 624 665 1.0E-6 T 12-10-2018 Vc3S01_p10041 7ad5f7fe31114f4cfaee0897a8cffbfb 736 Gene3D G3DSA:2.70.20.10 215 486 1.5E-122 T 12-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 Vc3S01_p10041 7ad5f7fe31114f4cfaee0897a8cffbfb 736 SMART SM00437 275 571 1.2E-40 T 12-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 Vc3S01_p10041 7ad5f7fe31114f4cfaee0897a8cffbfb 736 Gene3D G3DSA:1.10.290.10 284 413 1.5E-122 T 12-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 Vc3S01_p10041 7ad5f7fe31114f4cfaee0897a8cffbfb 736 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 689 726 9.0E-7 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 Vc3S01_p10041 7ad5f7fe31114f4cfaee0897a8cffbfb 736 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 632 668 1.4E-10 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 Vc3S01_p10041 7ad5f7fe31114f4cfaee0897a8cffbfb 736 SUPERFAMILY SSF56712 1 620 7.85E-140 T 12-10-2018 IPR023405 DNA topoisomerase, type IA, core domain Vc3S01_p10041 7ad5f7fe31114f4cfaee0897a8cffbfb 736 SMART SM00493 1 126 1.2E-10 T 12-10-2018 IPR006171 TOPRIM domain Vc3S01_p10041 7ad5f7fe31114f4cfaee0897a8cffbfb 736 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 312 327 - T 12-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 Vc3S01_p10041 7ad5f7fe31114f4cfaee0897a8cffbfb 736 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 100 113 3.5E-15 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Vc3S01_p10041 7ad5f7fe31114f4cfaee0897a8cffbfb 736 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 399 415 3.5E-15 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Vc3S01_p10041 7ad5f7fe31114f4cfaee0897a8cffbfb 736 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 191 209 3.5E-15 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Vc3S01_p10041 7ad5f7fe31114f4cfaee0897a8cffbfb 736 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 527 541 3.5E-15 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Vc3S01_p10041 7ad5f7fe31114f4cfaee0897a8cffbfb 736 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 318 327 3.5E-15 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Vc3S01_p10041 7ad5f7fe31114f4cfaee0897a8cffbfb 736 Gene3D G3DSA:3.40.50.140 1 154 2.1E-45 T 12-10-2018 Vc3S01_p10041 7ad5f7fe31114f4cfaee0897a8cffbfb 736 Pfam PF01751 Toprim domain 3 133 6.3E-11 T 12-10-2018 IPR006171 TOPRIM domain Vc3S01_p10041 7ad5f7fe31114f4cfaee0897a8cffbfb 736 Gene3D G3DSA:1.10.460.10 160 613 1.5E-122 T 12-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 Vc3S01_p10041 7ad5f7fe31114f4cfaee0897a8cffbfb 736 SMART SM00436 126 221 3.9E-8 T 12-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 Vc3S01_p10041 7ad5f7fe31114f4cfaee0897a8cffbfb 736 Pfam PF01131 DNA topoisomerase 154 605 3.6E-83 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Vc3S01_3060 d553c5235ddbfe695843715b3320d8d2 497 Pfam PF00437 Type II/IV secretion system protein 124 389 2.5E-91 T 12-10-2018 IPR001482 Type II/IV secretion system protein Vc3S01_3060 d553c5235ddbfe695843715b3320d8d2 497 Gene3D G3DSA:3.30.300.160 1 75 2.2E-36 T 12-10-2018 Vc3S01_3060 d553c5235ddbfe695843715b3320d8d2 497 Gene3D G3DSA:3.40.50.300 224 497 4.3E-127 T 12-10-2018 Vc3S01_3060 d553c5235ddbfe695843715b3320d8d2 497 SUPERFAMILY SSF160246 9 75 1.46E-17 T 12-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily Vc3S01_3060 d553c5235ddbfe695843715b3320d8d2 497 Gene3D G3DSA:3.30.450.90 85 222 1.0E-55 T 12-10-2018 Vc3S01_3060 d553c5235ddbfe695843715b3320d8d2 497 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 317 331 - T 12-10-2018 IPR001482 Type II/IV secretion system protein Vc3S01_3060 d553c5235ddbfe695843715b3320d8d2 497 SMART SM00382 250 373 5.4E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_3060 d553c5235ddbfe695843715b3320d8d2 497 SUPERFAMILY SSF52540 104 494 3.41E-107 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_3060 d553c5235ddbfe695843715b3320d8d2 497 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 9 494 1.2E-227 T 12-10-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 Vc3S01_2537 4d651f5429c50a5f9d8a6e2f345932bd 315 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 1.3E-19 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Vc3S01_2537 4d651f5429c50a5f9d8a6e2f345932bd 315 SMART SM00354 4 74 8.4E-32 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Vc3S01_2537 4d651f5429c50a5f9d8a6e2f345932bd 315 SUPERFAMILY SSF47413 3 60 1.13E-16 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Vc3S01_2537 4d651f5429c50a5f9d8a6e2f345932bd 315 Gene3D G3DSA:3.40.50.2300 68 303 1.2E-65 T 12-10-2018 Vc3S01_2537 4d651f5429c50a5f9d8a6e2f345932bd 315 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 12-10-2018 Vc3S01_2537 4d651f5429c50a5f9d8a6e2f345932bd 315 TIGRFAM TIGR02405 trehalos_R_Ecol: trehalose operon repressor 4 310 5.1E-139 T 12-10-2018 IPR012771 Trehalose operon repressor GO:0003677|GO:0005991|GO:0045892 Vc3S01_2537 4d651f5429c50a5f9d8a6e2f345932bd 315 SUPERFAMILY SSF53822 63 306 6.48E-59 T 12-10-2018 IPR028082 Periplasmic binding protein-like I Vc3S01_2537 4d651f5429c50a5f9d8a6e2f345932bd 315 Gene3D G3DSA:3.40.50.2300 163 279 1.2E-65 T 12-10-2018 Vc3S01_2537 4d651f5429c50a5f9d8a6e2f345932bd 315 Gene3D G3DSA:1.10.260.40 2 60 1.7E-21 T 12-10-2018 Vc3S01_2537 4d651f5429c50a5f9d8a6e2f345932bd 315 Pfam PF13377 Periplasmic binding protein-like domain 168 308 7.5E-17 T 12-10-2018 Vc3S01_A0111 6023cdf3206833e2207dc825a724b123 666 Gene3D G3DSA:2.60.120.200 30 324 1.4E-86 T 12-10-2018 Vc3S01_A0111 6023cdf3206833e2207dc825a724b123 666 SUPERFAMILY SSF49899 33 317 1.95E-76 T 12-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Vc3S01_A0111 6023cdf3206833e2207dc825a724b123 666 Pfam PF00722 Glycosyl hydrolases family 16 91 313 8.7E-23 T 12-10-2018 IPR000757 Glycoside hydrolase family 16 GO:0004553|GO:0005975 Vc3S01_A0111 6023cdf3206833e2207dc825a724b123 666 SUPERFAMILY SSF49785 547 664 2.21E-6 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily Vc3S01_2184 7d45b66811c3d273cf337b7247d85412 353 SUPERFAMILY SSF142754 28 341 4.71E-106 T 12-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 Vc3S01_2184 7d45b66811c3d273cf337b7247d85412 353 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 28 341 4.9E-115 T 12-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 Vc3S01_2184 7d45b66811c3d273cf337b7247d85412 353 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 347 66.628 T 12-10-2018 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 Vc3S01_2184 7d45b66811c3d273cf337b7247d85412 353 Gene3D G3DSA:3.40.50.10800 200 295 1.5E-93 T 12-10-2018 Vc3S01_2184 7d45b66811c3d273cf337b7247d85412 353 Gene3D G3DSA:3.40.50.10800 31 322 1.5E-93 T 12-10-2018 Vc3S01_2184 7d45b66811c3d273cf337b7247d85412 353 Gene3D G3DSA:3.40.50.10800 115 340 1.5E-93 T 12-10-2018 Vc3S01_2184 7d45b66811c3d273cf337b7247d85412 353 Pfam PF02445 Quinolinate synthetase A protein 31 340 6.5E-102 T 12-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 Vc3S01_A0416 04bb6ff31ab6d484a693ebaa7bffc11a 379 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 273 279 - T 12-10-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 Reactome: R-HSA-9033241 Vc3S01_A0416 04bb6ff31ab6d484a693ebaa7bffc11a 379 PIRSF PIRSF000138 2 379 1.5E-122 T 12-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 Vc3S01_A0416 04bb6ff31ab6d484a693ebaa7bffc11a 379 SUPERFAMILY SSF51395 7 375 7.33E-99 T 12-10-2018 Vc3S01_A0416 04bb6ff31ab6d484a693ebaa7bffc11a 379 Gene3D G3DSA:3.20.20.70 3 378 1.6E-126 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_A0416 04bb6ff31ab6d484a693ebaa7bffc11a 379 Pfam PF01070 FMN-dependent dehydrogenase 13 375 3.8E-126 T 12-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 Vc3S01_0454 72e8db7e79a74be62fbb6d1dae22c965 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.4E-5 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Vc3S01_0454 72e8db7e79a74be62fbb6d1dae22c965 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.4E-5 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Vc3S01_0454 72e8db7e79a74be62fbb6d1dae22c965 332 SUPERFAMILY SSF53822 61 326 2.36E-68 T 12-10-2018 IPR028082 Periplasmic binding protein-like I Vc3S01_0454 72e8db7e79a74be62fbb6d1dae22c965 332 Pfam PF13377 Periplasmic binding protein-like domain 168 325 1.4E-29 T 12-10-2018 Vc3S01_0454 72e8db7e79a74be62fbb6d1dae22c965 332 Gene3D G3DSA:3.40.50.2300 160 289 6.6E-66 T 12-10-2018 Vc3S01_0454 72e8db7e79a74be62fbb6d1dae22c965 332 SUPERFAMILY SSF47413 2 59 1.63E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Vc3S01_0454 72e8db7e79a74be62fbb6d1dae22c965 332 SMART SM00354 1 71 2.6E-31 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Vc3S01_0454 72e8db7e79a74be62fbb6d1dae22c965 332 Gene3D G3DSA:3.40.50.2300 55 305 6.6E-66 T 12-10-2018 Vc3S01_0454 72e8db7e79a74be62fbb6d1dae22c965 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 3.0E-19 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Vc3S01_0454 72e8db7e79a74be62fbb6d1dae22c965 332 Gene3D G3DSA:1.10.260.40 1 54 1.2E-22 T 12-10-2018 Vc3S01_3056 370efff1aad5e8bb565eeac2ae61d4a1 131 Pfam PF07963 Prokaryotic N-terminal methylation motif 16 40 2.8E-7 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Vc3S01_3056 370efff1aad5e8bb565eeac2ae61d4a1 131 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 19 38 5.1E-6 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Vc3S01_3056 370efff1aad5e8bb565eeac2ae61d4a1 131 Gene3D G3DSA:3.30.1300.30 44 131 5.7E-36 T 12-10-2018 Vc3S01_3056 370efff1aad5e8bb565eeac2ae61d4a1 131 TIGRFAM TIGR01707 gspI: type II secretion system protein I 20 117 3.4E-37 T 12-10-2018 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 Vc3S01_3056 370efff1aad5e8bb565eeac2ae61d4a1 131 Pfam PF02501 Type II secretion system (T2SS), protein I 54 129 4.3E-22 T 12-10-2018 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 Vc3S01_3056 370efff1aad5e8bb565eeac2ae61d4a1 131 SUPERFAMILY SSF54523 51 129 7.32E-23 T 12-10-2018 Vc3S01_3056 370efff1aad5e8bb565eeac2ae61d4a1 131 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 19 39 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Vc3S01_2397 bef3aaf311a80439f745efd1b2963b4d 941 Gene3D G3DSA:3.40.50.12470 557 803 4.5E-173 T 12-10-2018 Vc3S01_2397 bef3aaf311a80439f745efd1b2963b4d 941 SMART SM00861 594 787 1.5E-64 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Vc3S01_2397 bef3aaf311a80439f745efd1b2963b4d 941 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 51 6.8E-14 T 12-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 Vc3S01_2397 bef3aaf311a80439f745efd1b2963b4d 941 Pfam PF02779 Transketolase, pyrimidine binding domain 593 788 3.9E-66 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Vc3S01_2397 bef3aaf311a80439f745efd1b2963b4d 941 Gene3D G3DSA:3.40.50.970 168 534 2.9E-145 T 12-10-2018 Vc3S01_2397 bef3aaf311a80439f745efd1b2963b4d 941 SUPERFAMILY SSF52518 122 536 4.93E-88 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold Vc3S01_2397 bef3aaf311a80439f745efd1b2963b4d 941 Gene3D G3DSA:3.40.50.11610 724 930 4.5E-173 T 12-10-2018 Vc3S01_2397 bef3aaf311a80439f745efd1b2963b4d 941 Gene3D G3DSA:1.10.287.1150 85 167 2.1E-30 T 12-10-2018 Vc3S01_2397 bef3aaf311a80439f745efd1b2963b4d 941 PIRSF PIRSF000157 1 935 0.0 T 12-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 Vc3S01_2397 bef3aaf311a80439f745efd1b2963b4d 941 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 15 933 0.0 T 12-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 Vc3S01_2397 bef3aaf311a80439f745efd1b2963b4d 941 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 791 933 2.2E-55 T 12-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 Vc3S01_2397 bef3aaf311a80439f745efd1b2963b4d 941 Pfam PF00676 Dehydrogenase E1 component 221 515 1.5E-48 T 12-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 Vc3S01_2397 bef3aaf311a80439f745efd1b2963b4d 941 SUPERFAMILY SSF52518 577 794 2.1E-52 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold Vc3S01_0309 72ac6fb36a162fb5f702e38462b05191 624 PIRSF PIRSF036456 1 624 0.0 T 12-10-2018 IPR011244 Bifunctional argininosuccinate lyase/acetyltransferase GO:0004056|GO:0005737|GO:0006526|GO:0016746 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Vc3S01_0309 72ac6fb36a162fb5f702e38462b05191 624 Gene3D G3DSA:3.40.630.30 463 604 1.6E-25 T 12-10-2018 Vc3S01_0309 72ac6fb36a162fb5f702e38462b05191 624 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 9.3E-68 T 12-10-2018 Vc3S01_0309 72ac6fb36a162fb5f702e38462b05191 624 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 9.3E-68 T 12-10-2018 Vc3S01_0309 72ac6fb36a162fb5f702e38462b05191 624 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 9.3E-68 T 12-10-2018 Vc3S01_0309 72ac6fb36a162fb5f702e38462b05191 624 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 9.3E-68 T 12-10-2018 Vc3S01_0309 72ac6fb36a162fb5f702e38462b05191 624 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 9.3E-68 T 12-10-2018 Vc3S01_0309 72ac6fb36a162fb5f702e38462b05191 624 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 9.3E-68 T 12-10-2018 Vc3S01_0309 72ac6fb36a162fb5f702e38462b05191 624 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 2.2E-23 T 12-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Vc3S01_0309 72ac6fb36a162fb5f702e38462b05191 624 SUPERFAMILY SSF48557 3 456 2.04E-140 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 Vc3S01_0309 72ac6fb36a162fb5f702e38462b05191 624 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 Vc3S01_0309 72ac6fb36a162fb5f702e38462b05191 624 SUPERFAMILY SSF55729 466 584 7.32E-16 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_0309 72ac6fb36a162fb5f702e38462b05191 624 Pfam PF00583 Acetyltransferase (GNAT) family 500 568 7.9E-9 T 12-10-2018 IPR000182 GNAT domain Vc3S01_0309 72ac6fb36a162fb5f702e38462b05191 624 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 454 40.09 T 12-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Vc3S01_0309 72ac6fb36a162fb5f702e38462b05191 624 Gene3D G3DSA:1.10.275.10 1 107 9.0E-36 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal Vc3S01_0309 72ac6fb36a162fb5f702e38462b05191 624 Gene3D G3DSA:1.10.40.30 363 433 2.4E-146 T 12-10-2018 Vc3S01_0309 72ac6fb36a162fb5f702e38462b05191 624 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 456 7.5E-201 T 12-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Vc3S01_0309 72ac6fb36a162fb5f702e38462b05191 624 Pfam PF00206 Lyase 6 301 8.3E-87 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal Vc3S01_0309 72ac6fb36a162fb5f702e38462b05191 624 Gene3D G3DSA:1.20.200.10 108 446 2.4E-146 T 12-10-2018 Vc3S01_0309 72ac6fb36a162fb5f702e38462b05191 624 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 5.5E-28 T 12-10-2018 IPR000362 Fumarate lyase family Vc3S01_0309 72ac6fb36a162fb5f702e38462b05191 624 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 5.5E-28 T 12-10-2018 IPR000362 Fumarate lyase family Vc3S01_0309 72ac6fb36a162fb5f702e38462b05191 624 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 5.5E-28 T 12-10-2018 IPR000362 Fumarate lyase family Vc3S01_0309 72ac6fb36a162fb5f702e38462b05191 624 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 5.5E-28 T 12-10-2018 IPR000362 Fumarate lyase family Vc3S01_A0134 376b060915b578687e5af4b8ac1b17d0 643 SUPERFAMILY SSF82171 42 378 5.89E-22 T 12-10-2018 Vc3S01_A0134 376b060915b578687e5af4b8ac1b17d0 643 Gene3D G3DSA:3.40.50.1820 280 640 6.1E-81 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_A0134 376b060915b578687e5af4b8ac1b17d0 643 Pfam PF00326 Prolyl oligopeptidase family 422 635 1.0E-47 T 12-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 Vc3S01_A0134 376b060915b578687e5af4b8ac1b17d0 643 SUPERFAMILY SSF53474 377 635 1.21E-69 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_A0134 376b060915b578687e5af4b8ac1b17d0 643 Gene3D G3DSA:2.120.10.30 39 218 4.6E-8 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Vc3S01_A0134 376b060915b578687e5af4b8ac1b17d0 643 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 433 457 3.7E-5 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Vc3S01_A0134 376b060915b578687e5af4b8ac1b17d0 643 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 552 567 3.7E-5 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Vc3S01_A0134 376b060915b578687e5af4b8ac1b17d0 643 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 491 511 3.7E-5 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Vc3S01_0363 4185000bef48f0d5018ac010ffa99190 578 SUPERFAMILY SSF56014 435 566 3.53E-33 T 12-10-2018 Vc3S01_0363 4185000bef48f0d5018ac010ffa99190 578 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 437 564 1.5E-5 T 12-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Vc3S01_0363 4185000bef48f0d5018ac010ffa99190 578 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 24 566 6.2E-286 T 12-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Vc3S01_0363 4185000bef48f0d5018ac010ffa99190 578 SUPERFAMILY SSF56014 154 350 2.09E-57 T 12-10-2018 Vc3S01_0363 4185000bef48f0d5018ac010ffa99190 578 Gene3D G3DSA:3.30.413.10 146 354 3.9E-82 T 12-10-2018 Vc3S01_0363 4185000bef48f0d5018ac010ffa99190 578 Gene3D G3DSA:3.90.480.20 21 422 3.9E-82 T 12-10-2018 Vc3S01_0363 4185000bef48f0d5018ac010ffa99190 578 PRINTS PR00397 Sirohaem Fe-binding site signature 485 503 4.7E-9 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Vc3S01_0363 4185000bef48f0d5018ac010ffa99190 578 PRINTS PR00397 Sirohaem Fe-binding site signature 436 454 4.7E-9 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Vc3S01_0363 4185000bef48f0d5018ac010ffa99190 578 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 15 578 58.509 T 12-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Vc3S01_0363 4185000bef48f0d5018ac010ffa99190 578 SUPERFAMILY SSF55124 18 150 2.45E-27 T 12-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Vc3S01_0363 4185000bef48f0d5018ac010ffa99190 578 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 84 143 6.7E-14 T 12-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Vc3S01_0363 4185000bef48f0d5018ac010ffa99190 578 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 359 423 1.9E-13 T 12-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Vc3S01_0363 4185000bef48f0d5018ac010ffa99190 578 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 485 501 - T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Vc3S01_0363 4185000bef48f0d5018ac010ffa99190 578 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 178 337 1.5E-44 T 12-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Vc3S01_0363 4185000bef48f0d5018ac010ffa99190 578 Gene3D G3DSA:3.30.413.10 432 575 1.9E-35 T 12-10-2018 Vc3S01_0363 4185000bef48f0d5018ac010ffa99190 578 SUPERFAMILY SSF55124 352 429 8.07E-21 T 12-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Vc3S01_A0532 c019a1486c597311e60043bb5f3c787e 466 Pfam PF13727 CoA-binding domain 66 240 1.2E-38 T 12-10-2018 Vc3S01_A0532 c019a1486c597311e60043bb5f3c787e 466 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 22 466 5.0E-152 T 12-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase Vc3S01_A0532 c019a1486c597311e60043bb5f3c787e 466 Pfam PF02397 Bacterial sugar transferase 276 458 1.5E-66 T 12-10-2018 IPR003362 Bacterial sugar transferase Vc3S01_A0532 c019a1486c597311e60043bb5f3c787e 466 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 23 466 1.1E-169 T 12-10-2018 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 Vc3S01_A0532 c019a1486c597311e60043bb5f3c787e 466 Gene3D G3DSA:3.40.50.720 141 264 6.6E-9 T 12-10-2018 Vc3S01_A1384 383d757394cf5532e58ff8a0a0f91feb 251 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 23 251 2.7E-54 T 12-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 Vc3S01_A1384 383d757394cf5532e58ff8a0a0f91feb 251 Gene3D G3DSA:3.40.50.1580 19 251 1.3E-67 T 12-10-2018 Vc3S01_A1384 383d757394cf5532e58ff8a0a0f91feb 251 Pfam PF01048 Phosphorylase superfamily 22 242 7.7E-49 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 Vc3S01_A1384 383d757394cf5532e58ff8a0a0f91feb 251 SUPERFAMILY SSF53167 22 249 1.44E-63 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 Vc3S01_1891 2c24ce8a1cc02ae4b893d709c963602e 642 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 67 635 34.323 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Vc3S01_1891 2c24ce8a1cc02ae4b893d709c963602e 642 SMART SM00863 171 220 5.1E-19 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Vc3S01_1891 2c24ce8a1cc02ae4b893d709c963602e 642 Gene3D G3DSA:3.30.54.20 131 188 6.5E-64 T 12-10-2018 Vc3S01_1891 2c24ce8a1cc02ae4b893d709c963602e 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 363 386 1.3E-53 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Vc3S01_1891 2c24ce8a1cc02ae4b893d709c963602e 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 535 547 1.3E-53 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Vc3S01_1891 2c24ce8a1cc02ae4b893d709c963602e 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 330 358 1.3E-53 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Vc3S01_1891 2c24ce8a1cc02ae4b893d709c963602e 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 465 493 1.3E-53 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Vc3S01_1891 2c24ce8a1cc02ae4b893d709c963602e 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 508 521 1.3E-53 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Vc3S01_1891 2c24ce8a1cc02ae4b893d709c963602e 642 SUPERFAMILY SSF55681 244 527 7.76E-100 T 12-10-2018 Vc3S01_1891 2c24ce8a1cc02ae4b893d709c963602e 642 Gene3D G3DSA:3.30.930.10 224 532 1.5E-129 T 12-10-2018 Vc3S01_1891 2c24ce8a1cc02ae4b893d709c963602e 642 SUPERFAMILY SSF81271 3 61 2.29E-15 T 12-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 Vc3S01_1891 2c24ce8a1cc02ae4b893d709c963602e 642 Gene3D G3DSA:3.40.50.800 533 642 1.3E-31 T 12-10-2018 IPR036621 Anticodon-binding domain superfamily Vc3S01_1891 2c24ce8a1cc02ae4b893d709c963602e 642 Gene3D G3DSA:3.30.980.10 70 223 6.5E-64 T 12-10-2018 Vc3S01_1891 2c24ce8a1cc02ae4b893d709c963602e 642 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 319 530 4.3E-50 T 12-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Vc3S01_1891 2c24ce8a1cc02ae4b893d709c963602e 642 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 173 220 7.7E-14 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Vc3S01_1891 2c24ce8a1cc02ae4b893d709c963602e 642 Gene3D G3DSA:3.10.20.30 3 62 1.1E-22 T 12-10-2018 IPR012675 Beta-grasp domain superfamily Vc3S01_1891 2c24ce8a1cc02ae4b893d709c963602e 642 SUPERFAMILY SSF52954 530 638 7.1E-32 T 12-10-2018 Vc3S01_1891 2c24ce8a1cc02ae4b893d709c963602e 642 Pfam PF03129 Anticodon binding domain 542 631 8.2E-22 T 12-10-2018 IPR004154 Anticodon-binding Vc3S01_1891 2c24ce8a1cc02ae4b893d709c963602e 642 SUPERFAMILY SSF55186 65 242 6.67E-65 T 12-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 Vc3S01_1891 2c24ce8a1cc02ae4b893d709c963602e 642 Pfam PF02824 TGS domain 4 61 9.8E-12 T 12-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 Vc3S01_1891 2c24ce8a1cc02ae4b893d709c963602e 642 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 73 632 1.2E-241 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Vc3S01_2940 b31e1053967a7de8f847d99ce8f56d74 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 22.535 T 12-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 Vc3S01_2940 b31e1053967a7de8f847d99ce8f56d74 100 Pfam PF00276 Ribosomal protein L23 9 95 1.7E-31 T 12-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 Vc3S01_2940 b31e1053967a7de8f847d99ce8f56d74 100 ProSitePatterns PS00050 Ribosomal protein L23 signature. 81 96 - T 12-10-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_2940 b31e1053967a7de8f847d99ce8f56d74 100 Gene3D G3DSA:3.30.70.330 1 100 5.0E-38 T 12-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily Vc3S01_2940 b31e1053967a7de8f847d99ce8f56d74 100 SUPERFAMILY SSF54189 6 97 2.88E-32 T 12-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_1509 a799ae0e8bcc9c0f576031eef3b42a56 279 Gene3D G3DSA:3.40.50.720 102 241 7.4E-66 T 12-10-2018 Vc3S01_1509 a799ae0e8bcc9c0f576031eef3b42a56 279 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 6 91 4.1E-17 T 12-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 Vc3S01_1509 a799ae0e8bcc9c0f576031eef3b42a56 279 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 123 194 2.0E-6 T 12-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 Vc3S01_1509 a799ae0e8bcc9c0f576031eef3b42a56 279 SUPERFAMILY SSF53223 2 103 1.44E-19 T 12-10-2018 Vc3S01_1509 a799ae0e8bcc9c0f576031eef3b42a56 279 Gene3D G3DSA:3.40.50.10860 6 262 7.4E-66 T 12-10-2018 Vc3S01_1509 a799ae0e8bcc9c0f576031eef3b42a56 279 SUPERFAMILY SSF51735 104 270 3.44E-31 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_0271 63e61475396246316e527be0357c486c 485 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 3 484 3.4E-226 T 12-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 Vc3S01_0271 63e61475396246316e527be0357c486c 485 Gene3D G3DSA:3.40.309.10 247 436 8.5E-139 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Vc3S01_0271 63e61475396246316e527be0357c486c 485 Gene3D G3DSA:3.40.605.10 7 448 8.5E-139 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Vc3S01_0271 63e61475396246316e527be0357c486c 485 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 271 282 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 Vc3S01_0271 63e61475396246316e527be0357c486c 485 SUPERFAMILY SSF53720 2 449 6.94E-122 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Vc3S01_0271 63e61475396246316e527be0357c486c 485 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 242 249 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 Vc3S01_0271 63e61475396246316e527be0357c486c 485 Pfam PF00171 Aldehyde dehydrogenase family 9 458 6.7E-120 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Vc3S01_0271 63e61475396246316e527be0357c486c 485 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 1 485 55.912 T 12-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 Vc3S01_1433 91184cc1ce3bc33de89bd8709d1cba11 654 Gene3D G3DSA:3.30.420.40 216 271 1.0E-32 T 12-10-2018 Vc3S01_1433 91184cc1ce3bc33de89bd8709d1cba11 654 Gene3D G3DSA:3.90.640.10 272 351 1.0E-32 T 12-10-2018 Vc3S01_1433 91184cc1ce3bc33de89bd8709d1cba11 654 Gene3D G3DSA:3.30.420.40 25 215 1.0E-32 T 12-10-2018 Vc3S01_1433 91184cc1ce3bc33de89bd8709d1cba11 654 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 27 34 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Vc3S01_1433 91184cc1ce3bc33de89bd8709d1cba11 654 SUPERFAMILY SSF53067 230 495 3.38E-26 T 12-10-2018 Vc3S01_1433 91184cc1ce3bc33de89bd8709d1cba11 654 SUPERFAMILY SSF53067 23 216 9.83E-27 T 12-10-2018 Vc3S01_1433 91184cc1ce3bc33de89bd8709d1cba11 654 Pfam PF00012 Hsp70 protein 25 349 2.0E-15 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Vc3S01_1433 91184cc1ce3bc33de89bd8709d1cba11 654 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 235 248 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Vc3S01_1433 91184cc1ce3bc33de89bd8709d1cba11 654 PRINTS PR00301 70kDa heat shock protein signature 241 251 5.1E-7 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Vc3S01_1433 91184cc1ce3bc33de89bd8709d1cba11 654 PRINTS PR00301 70kDa heat shock protein signature 23 36 5.1E-7 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Vc3S01_1433 91184cc1ce3bc33de89bd8709d1cba11 654 PRINTS PR00301 70kDa heat shock protein signature 174 194 5.1E-7 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Vc3S01_1064 e6ac776a5e36b16d0e5d0135cee16e40 398 SUPERFAMILY SSF53067 3 195 6.41E-63 T 12-10-2018 Vc3S01_1064 e6ac776a5e36b16d0e5d0135cee16e40 398 Gene3D G3DSA:3.30.420.40 2 194 1.1E-71 T 12-10-2018 Vc3S01_1064 e6ac776a5e36b16d0e5d0135cee16e40 398 TIGRFAM TIGR00016 ackA: acetate kinase 2 396 5.1E-169 T 12-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Vc3S01_1064 e6ac776a5e36b16d0e5d0135cee16e40 398 Pfam PF00871 Acetokinase family 5 390 5.6E-163 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Vc3S01_1064 e6ac776a5e36b16d0e5d0135cee16e40 398 PIRSF PIRSF000722 1 397 1.1E-145 T 12-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Vc3S01_1064 e6ac776a5e36b16d0e5d0135cee16e40 398 Hamap MF_00020 Acetate kinase [ackA]. 1 398 186.348 T 12-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Vc3S01_1064 e6ac776a5e36b16d0e5d0135cee16e40 398 SUPERFAMILY SSF53067 156 395 3.65E-85 T 12-10-2018 Vc3S01_1064 e6ac776a5e36b16d0e5d0135cee16e40 398 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 202 219 - T 12-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Vc3S01_1064 e6ac776a5e36b16d0e5d0135cee16e40 398 Gene3D G3DSA:3.30.420.40 195 397 2.3E-82 T 12-10-2018 Vc3S01_1064 e6ac776a5e36b16d0e5d0135cee16e40 398 PRINTS PR00471 Acetate kinase family signature 172 185 3.0E-45 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Vc3S01_1064 e6ac776a5e36b16d0e5d0135cee16e40 398 PRINTS PR00471 Acetate kinase family signature 377 389 3.0E-45 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Vc3S01_1064 e6ac776a5e36b16d0e5d0135cee16e40 398 PRINTS PR00471 Acetate kinase family signature 298 311 3.0E-45 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Vc3S01_1064 e6ac776a5e36b16d0e5d0135cee16e40 398 PRINTS PR00471 Acetate kinase family signature 202 223 3.0E-45 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Vc3S01_1064 e6ac776a5e36b16d0e5d0135cee16e40 398 PRINTS PR00471 Acetate kinase family signature 321 337 3.0E-45 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Vc3S01_1064 e6ac776a5e36b16d0e5d0135cee16e40 398 PRINTS PR00471 Acetate kinase family signature 5 16 3.0E-45 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Vc3S01_1064 e6ac776a5e36b16d0e5d0135cee16e40 398 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 12-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Vc3S01_0293 4b228c42558e2729779e63382b9c6f71 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.865 T 12-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 Vc3S01_0293 4b228c42558e2729779e63382b9c6f71 156 PIRSF PIRSF002122 3 156 5.1E-63 T 12-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 Vc3S01_0293 4b228c42558e2729779e63382b9c6f71 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 4.1E-71 T 12-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 Vc3S01_0293 4b228c42558e2729779e63382b9c6f71 156 Gene3D G3DSA:1.10.455.10 2 155 1.1E-64 T 12-10-2018 IPR036823 Ribosomal protein S7 domain superfamily Vc3S01_0293 4b228c42558e2729779e63382b9c6f71 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 12-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_0293 4b228c42558e2729779e63382b9c6f71 156 SUPERFAMILY SSF47973 6 149 1.7E-59 T 12-10-2018 IPR036823 Ribosomal protein S7 domain superfamily Vc3S01_0293 4b228c42558e2729779e63382b9c6f71 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 6.2E-66 T 12-10-2018 IPR023798 Ribosomal protein S7 domain Vc3S01_0428 6cc0fb869103075765075b7ec57e8a49 421 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 416 2.0E-181 T 12-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Vc3S01_0428 6cc0fb869103075765075b7ec57e8a49 421 Gene3D G3DSA:3.65.10.10 22 229 1.7E-170 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Vc3S01_0428 6cc0fb869103075765075b7ec57e8a49 421 SUPERFAMILY SSF55205 6 418 4.74E-141 T 12-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 Vc3S01_0428 6cc0fb869103075765075b7ec57e8a49 421 Gene3D G3DSA:3.65.10.10 12 414 1.7E-170 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Vc3S01_0428 6cc0fb869103075765075b7ec57e8a49 421 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 417 43.698 T 12-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Vc3S01_0428 6cc0fb869103075765075b7ec57e8a49 421 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 11 407 2.5E-121 T 12-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 Vc3S01_A1083 f4b0570da0a66c442d63b88ea1f55865 198 PIRSF PIRSF020606 1 197 1.5E-82 T 12-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 Vc3S01_A1083 f4b0570da0a66c442d63b88ea1f55865 198 Pfam PF09997 Predicted membrane protein (DUF2238) 41 176 1.0E-51 T 12-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 Vc3S01_A0329 ac6647294e80453f192823e71f5b7f81 906 Pfam PF10101 Predicted membrane protein (DUF2339) 142 893 8.0E-103 T 12-10-2018 IPR019286 Protein of unknown function DUF2339, transmembrane Vc3S01_A0329 ac6647294e80453f192823e71f5b7f81 906 PIRSF PIRSF035905 1 904 5.1E-221 T 12-10-2018 IPR014600 Uncharacterised conserved protein UCP035905, membrane protein Vc3S01_1512 f70ed86dc0354e6203687d4028844593 292 Pfam PF04909 Amidohydrolase 24 287 9.3E-44 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Vc3S01_1512 f70ed86dc0354e6203687d4028844593 292 Gene3D G3DSA:3.20.20.140 2 290 1.1E-84 T 12-10-2018 Vc3S01_1512 f70ed86dc0354e6203687d4028844593 292 SUPERFAMILY SSF51556 20 287 2.79E-77 T 12-10-2018 IPR032466 Metal-dependent hydrolase Vc3S01_A1737 c8ee6cb47459210754f858388e9700fe 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.1E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A1737 c8ee6cb47459210754f858388e9700fe 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.1E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A1737 c8ee6cb47459210754f858388e9700fe 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.1E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A1737 c8ee6cb47459210754f858388e9700fe 294 Gene3D G3DSA:3.40.190.10 159 262 1.8E-34 T 12-10-2018 Vc3S01_A1737 c8ee6cb47459210754f858388e9700fe 294 SUPERFAMILY SSF46785 2 82 9.46E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A1737 c8ee6cb47459210754f858388e9700fe 294 Gene3D G3DSA:3.40.190.10 100 289 1.8E-34 T 12-10-2018 Vc3S01_A1737 c8ee6cb47459210754f858388e9700fe 294 Pfam PF03466 LysR substrate binding domain 87 293 3.0E-22 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_A1737 c8ee6cb47459210754f858388e9700fe 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 6.4E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A1737 c8ee6cb47459210754f858388e9700fe 294 Gene3D G3DSA:1.10.10.10 5 94 6.0E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A1737 c8ee6cb47459210754f858388e9700fe 294 SUPERFAMILY SSF53850 88 293 7.96E-25 T 12-10-2018 Vc3S01_1284 c6cca0569828245b62e41dfc901cd378 514 Gene3D G3DSA:1.10.8.60 375 441 1.2E-15 T 12-10-2018 Vc3S01_1284 c6cca0569828245b62e41dfc901cd378 514 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 417 426 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Vc3S01_1284 c6cca0569828245b62e41dfc901cd378 514 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 465 513 3.4E-28 T 12-10-2018 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 Vc3S01_1284 c6cca0569828245b62e41dfc901cd378 514 Gene3D G3DSA:1.10.10.60 458 513 4.5E-25 T 12-10-2018 Vc3S01_1284 c6cca0569828245b62e41dfc901cd378 514 SMART SM00091 80 146 6.8E-7 T 12-10-2018 IPR000014 PAS domain Vc3S01_1284 c6cca0569828245b62e41dfc901cd378 514 Gene3D G3DSA:3.30.450.20 82 187 5.1E-19 T 12-10-2018 Vc3S01_1284 c6cca0569828245b62e41dfc901cd378 514 Gene3D G3DSA:3.30.70.260 1 80 4.6E-26 T 12-10-2018 Vc3S01_1284 c6cca0569828245b62e41dfc901cd378 514 Pfam PF00989 PAS fold 83 130 4.3E-6 T 12-10-2018 IPR013767 PAS fold GO:0006355 Vc3S01_1284 c6cca0569828245b62e41dfc901cd378 514 SUPERFAMILY SSF52540 205 445 3.51E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_1284 c6cca0569828245b62e41dfc901cd378 514 SMART SM00382 225 368 1.2E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_1284 c6cca0569828245b62e41dfc901cd378 514 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 290 305 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Vc3S01_1284 c6cca0569828245b62e41dfc901cd378 514 SUPERFAMILY SSF55785 81 169 2.09E-9 T 12-10-2018 IPR035965 PAS domain superfamily Vc3S01_1284 c6cca0569828245b62e41dfc901cd378 514 SUPERFAMILY SSF46689 461 512 8.96E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_1284 c6cca0569828245b62e41dfc901cd378 514 Gene3D G3DSA:3.40.50.300 196 374 1.0E-57 T 12-10-2018 Vc3S01_1284 c6cca0569828245b62e41dfc901cd378 514 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 229 242 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Vc3S01_1284 c6cca0569828245b62e41dfc901cd378 514 SUPERFAMILY SSF55021 1 68 9.67E-7 T 12-10-2018 Vc3S01_1284 c6cca0569828245b62e41dfc901cd378 514 Pfam PF00158 Sigma-54 interaction domain 207 370 3.5E-57 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Vc3S01_A0873 22b57a0d845326ad005910a0186f530b 389 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 131 143 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Vc3S01_A0873 22b57a0d845326ad005910a0186f530b 389 Gene3D G3DSA:2.40.110.10 128 240 1.2E-44 T 12-10-2018 Vc3S01_A0873 22b57a0d845326ad005910a0186f530b 389 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 343 362 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Vc3S01_A0873 22b57a0d845326ad005910a0186f530b 389 SUPERFAMILY SSF56645 6 249 2.36E-84 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Vc3S01_A0873 22b57a0d845326ad005910a0186f530b 389 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 236 384 1.1E-43 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Vc3S01_A0873 22b57a0d845326ad005910a0186f530b 389 Gene3D G3DSA:1.10.540.10 2 127 1.0E-45 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Vc3S01_A0873 22b57a0d845326ad005910a0186f530b 389 Gene3D G3DSA:1.20.140.10 241 385 5.5E-47 T 12-10-2018 Vc3S01_A0873 22b57a0d845326ad005910a0186f530b 389 PIRSF PIRSF016578 134 389 5.7E-12 T 12-10-2018 Vc3S01_A0873 22b57a0d845326ad005910a0186f530b 389 PIRSF PIRSF016578 15 103 0.066 T 12-10-2018 Vc3S01_A0873 22b57a0d845326ad005910a0186f530b 389 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 129 224 1.2E-24 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 Vc3S01_A0873 22b57a0d845326ad005910a0186f530b 389 SUPERFAMILY SSF47203 234 386 1.93E-47 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Vc3S01_A0873 22b57a0d845326ad005910a0186f530b 389 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 15 124 3.9E-36 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Vc3S01_3144 ec5c9a5c2adbadb72f0f29a4797ceef9 190 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 186 1.9E-17 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Vc3S01_3144 ec5c9a5c2adbadb72f0f29a4797ceef9 190 Gene3D G3DSA:1.10.10.10 125 189 3.0E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_3144 ec5c9a5c2adbadb72f0f29a4797ceef9 190 Pfam PF07638 ECF sigma factor 6 188 5.0E-30 T 12-10-2018 IPR011517 RNA polymerase sigma-70 ECF-like Vc3S01_3144 ec5c9a5c2adbadb72f0f29a4797ceef9 190 SUPERFAMILY SSF88659 123 187 4.86E-6 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Vc3S01_3144 ec5c9a5c2adbadb72f0f29a4797ceef9 190 TIGRFAM TIGR02999 Sig-70_X6: RNA polymerase sigma factor, TIGR02999 family 5 187 2.3E-58 T 12-10-2018 IPR011517 RNA polymerase sigma-70 ECF-like Vc3S01_2135 2d85dd0a23e1e2b57d67c1a910f30c3c 605 PRINTS PR01592 Low calcium response V antigen signature 580 602 3.5E-12 T 12-10-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 Vc3S01_2135 2d85dd0a23e1e2b57d67c1a910f30c3c 605 PRINTS PR01592 Low calcium response V antigen signature 418 438 3.5E-12 T 12-10-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 Vc3S01_2135 2d85dd0a23e1e2b57d67c1a910f30c3c 605 PRINTS PR01592 Low calcium response V antigen signature 561 580 3.5E-12 T 12-10-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 Vc3S01_2135 2d85dd0a23e1e2b57d67c1a910f30c3c 605 Pfam PF04792 V antigen (LcrV) protein 422 604 1.2E-27 T 12-10-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 Vc3S01_2135 2d85dd0a23e1e2b57d67c1a910f30c3c 605 SUPERFAMILY SSF103388 347 604 3.53E-88 T 12-10-2018 IPR036139 Virulence-associated V antigen superfamily GO:0005576|GO:0009405 Vc3S01_2161 3f4e8f373c44b594eb4fc920c3797019 114 TIGRFAM TIGR02497 yscI_hrpB_dom: type III secretion apparatus protein, YscI/HrpB, C-terminal domain 76 114 6.6E-14 T 12-10-2018 IPR012670 Type III secretion system, YscI/HrpB GO:0009306 Vc3S01_2161 3f4e8f373c44b594eb4fc920c3797019 114 Pfam PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI 27 114 1.2E-27 T 12-10-2018 IPR012670 Type III secretion system, YscI/HrpB GO:0009306 Vc3S01_0585 81b53c2924b64116f84157e38533ed85 822 Pfam PF08482 ATP-dependent helicase C-terminal 674 806 9.3E-52 T 12-10-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal Vc3S01_0585 81b53c2924b64116f84157e38533ed85 822 Gene3D G3DSA:1.20.120.1080 372 469 4.6E-7 T 12-10-2018 Vc3S01_0585 81b53c2924b64116f84157e38533ed85 822 Pfam PF04408 Helicase associated domain (HA2) 388 452 4.9E-9 T 12-10-2018 IPR007502 Helicase-associated domain GO:0004386 Vc3S01_0585 81b53c2924b64116f84157e38533ed85 822 Gene3D G3DSA:3.40.50.300 1 179 2.8E-52 T 12-10-2018 Vc3S01_0585 81b53c2924b64116f84157e38533ed85 822 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 4 818 0.0 T 12-10-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 Vc3S01_0585 81b53c2924b64116f84157e38533ed85 822 Pfam PF00271 Helicase conserved C-terminal domain 205 326 1.2E-15 T 12-10-2018 IPR001650 Helicase, C-terminal Vc3S01_0585 81b53c2924b64116f84157e38533ed85 822 SMART SM00847 387 471 6.5E-6 T 12-10-2018 IPR007502 Helicase-associated domain GO:0004386 Vc3S01_0585 81b53c2924b64116f84157e38533ed85 822 SMART SM00490 226 327 9.3E-20 T 12-10-2018 IPR001650 Helicase, C-terminal Vc3S01_0585 81b53c2924b64116f84157e38533ed85 822 Pfam PF00270 DEAD/DEAH box helicase 11 162 2.1E-10 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Vc3S01_0585 81b53c2924b64116f84157e38533ed85 822 PIRSF PIRSF005496 1 820 0.0 T 12-10-2018 Vc3S01_0585 81b53c2924b64116f84157e38533ed85 822 Gene3D G3DSA:3.40.50.300 180 345 2.7E-51 T 12-10-2018 Vc3S01_0585 81b53c2924b64116f84157e38533ed85 822 SMART SM00487 2 184 1.0E-13 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Vc3S01_0585 81b53c2924b64116f84157e38533ed85 822 SUPERFAMILY SSF52540 12 479 1.9E-51 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A0965 5c9b4a568e89162147bb8639dfa742af 128 Gene3D G3DSA:3.40.50.300 1 112 2.8E-5 T 12-10-2018 Vc3S01_A0965 5c9b4a568e89162147bb8639dfa742af 128 Pfam PF13521 AAA domain 3 108 1.3E-22 T 12-10-2018 IPR038727 NadR/Ttd14, AAA domain Vc3S01_A0965 5c9b4a568e89162147bb8639dfa742af 128 SUPERFAMILY SSF52540 8 117 1.98E-8 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A1211 a099039a775f21e835ba8f9b3726bf84 379 Gene3D G3DSA:3.60.21.10 1 266 6.2E-82 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like Vc3S01_A1211 a099039a775f21e835ba8f9b3726bf84 379 SUPERFAMILY SSF56300 1 320 5.41E-62 T 12-10-2018 Vc3S01_A1211 a099039a775f21e835ba8f9b3726bf84 379 Pfam PF00149 Calcineurin-like phosphoesterase 1 218 1.0E-17 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Vc3S01_A1211 a099039a775f21e835ba8f9b3726bf84 379 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 268 353 3.6E-10 T 12-10-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain Vc3S01_A1211 a099039a775f21e835ba8f9b3726bf84 379 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 245 4.9E-58 T 12-10-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 Vc3S01_0021 c4e55e6e49e914507aa1407cdd4b1a2b 394 Pfam PF00589 Phage integrase family 210 368 8.1E-19 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Vc3S01_0021 c4e55e6e49e914507aa1407cdd4b1a2b 394 Gene3D G3DSA:1.10.443.10 206 381 1.8E-28 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Vc3S01_0021 c4e55e6e49e914507aa1407cdd4b1a2b 394 Pfam PF13102 Phage integrase SAM-like domain 96 196 5.1E-24 T 12-10-2018 IPR025269 Phage integrase SAM-like domain Vc3S01_0021 c4e55e6e49e914507aa1407cdd4b1a2b 394 Pfam PF17293 Arm DNA-binding domain 4 83 9.3E-8 T 12-10-2018 IPR035386 Arm, DNA-binding domain Vc3S01_0021 c4e55e6e49e914507aa1407cdd4b1a2b 394 SUPERFAMILY SSF56349 97 378 1.88E-45 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Vc3S01_0021 c4e55e6e49e914507aa1407cdd4b1a2b 394 Gene3D G3DSA:1.10.150.130 89 205 2.1E-18 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal Vc3S01_p20134 9a76213d7127abef4b3c3bb7dda9c162 384 Pfam PF00437 Type II/IV secretion system protein 27 307 3.6E-28 T 12-10-2018 IPR001482 Type II/IV secretion system protein Vc3S01_p20134 9a76213d7127abef4b3c3bb7dda9c162 384 Gene3D G3DSA:3.30.450.90 13 117 6.6E-6 T 12-10-2018 Vc3S01_p20134 9a76213d7127abef4b3c3bb7dda9c162 384 SUPERFAMILY SSF52540 23 372 3.51E-36 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_p20134 9a76213d7127abef4b3c3bb7dda9c162 384 Gene3D G3DSA:3.40.50.300 131 384 3.6E-54 T 12-10-2018 Vc3S01_A0993 5b5f49fffe7519781cb8e00a3d585ada 59 Pfam PF06945 Protein of unknown function (DUF1289) 6 52 1.2E-14 T 12-10-2018 IPR010710 Protein of unknown function DUF1289 Vc3S01_1991 3fb72cc2fcdbe05d365cc2fc1c87fe31 245 Pfam PF02754 Cysteine-rich domain 110 192 4.3E-8 T 12-10-2018 IPR004017 Cysteine-rich domain Vc3S01_1991 3fb72cc2fcdbe05d365cc2fc1c87fe31 245 Pfam PF02754 Cysteine-rich domain 19 74 8.5E-6 T 12-10-2018 IPR004017 Cysteine-rich domain Vc3S01_1413 1403fbf776113c6fe8c29b464b42d6a8 300 Gene3D G3DSA:3.40.190.10 74 281 2.4E-37 T 12-10-2018 Vc3S01_1413 1403fbf776113c6fe8c29b464b42d6a8 300 Gene3D G3DSA:1.10.10.10 1 71 6.5E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_1413 1403fbf776113c6fe8c29b464b42d6a8 300 Gene3D G3DSA:3.40.190.10 159 257 2.4E-37 T 12-10-2018 Vc3S01_1413 1403fbf776113c6fe8c29b464b42d6a8 300 SUPERFAMILY SSF46785 3 68 8.16E-13 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_1413 1403fbf776113c6fe8c29b464b42d6a8 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 51 1.8E-12 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_1413 1403fbf776113c6fe8c29b464b42d6a8 300 SUPERFAMILY SSF53850 74 283 3.8E-31 T 12-10-2018 Vc3S01_1413 1403fbf776113c6fe8c29b464b42d6a8 300 Pfam PF03466 LysR substrate binding domain 80 286 3.3E-14 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_1502 a93920dc508479364dea1035d094906f 474 Gene3D G3DSA:3.40.1160.10 3 308 4.3E-57 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Vc3S01_1502 a93920dc508479364dea1035d094906f 474 SUPERFAMILY SSF53633 5 307 2.24E-54 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Vc3S01_1502 a93920dc508479364dea1035d094906f 474 Pfam PF00696 Amino acid kinase family 4 293 1.7E-22 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Vc3S01_1502 a93920dc508479364dea1035d094906f 474 SUPERFAMILY SSF55021 398 464 1.3E-9 T 12-10-2018 Vc3S01_1502 a93920dc508479364dea1035d094906f 474 Gene3D G3DSA:3.30.2130.10 312 466 3.5E-11 T 12-10-2018 Vc3S01_A0376 2c33be798b739902b8a15976baa05ea0 346 SMART SM00020 35 276 3.1E-52 T 12-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 Vc3S01_A0376 2c33be798b739902b8a15976baa05ea0 346 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 225 236 - T 12-10-2018 IPR033116 Serine proteases, trypsin family, serine active site Vc3S01_A0376 2c33be798b739902b8a15976baa05ea0 346 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 78 83 - T 12-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 Vc3S01_A0376 2c33be798b739902b8a15976baa05ea0 346 SUPERFAMILY SSF50494 17 280 4.42E-61 T 12-10-2018 IPR009003 Peptidase S1, PA clan Vc3S01_A0376 2c33be798b739902b8a15976baa05ea0 346 Gene3D G3DSA:2.40.10.10 48 277 3.3E-54 T 12-10-2018 Vc3S01_A0376 2c33be798b739902b8a15976baa05ea0 346 Pfam PF00089 Trypsin 36 276 3.6E-42 T 12-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 Vc3S01_A0376 2c33be798b739902b8a15976baa05ea0 346 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 224 236 7.2E-13 T 12-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 Vc3S01_A0376 2c33be798b739902b8a15976baa05ea0 346 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 132 146 7.2E-13 T 12-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 Vc3S01_A0376 2c33be798b739902b8a15976baa05ea0 346 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 68 83 7.2E-13 T 12-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 Vc3S01_A0376 2c33be798b739902b8a15976baa05ea0 346 Gene3D G3DSA:2.40.10.10 38 270 3.3E-54 T 12-10-2018 Vc3S01_2637 a7ac6e5c3c9923f1da343c1288f0874a 617 SUPERFAMILY SSF100920 384 537 6.67E-51 T 12-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 Vc3S01_2637 a7ac6e5c3c9923f1da343c1288f0874a 617 Gene3D G3DSA:1.20.1270.10 520 616 2.8E-25 T 12-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 Vc3S01_2637 a7ac6e5c3c9923f1da343c1288f0874a 617 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 205 218 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Vc3S01_2637 a7ac6e5c3c9923f1da343c1288f0874a 617 Gene3D G3DSA:3.90.640.10 238 311 6.7E-112 T 12-10-2018 Vc3S01_2637 a7ac6e5c3c9923f1da343c1288f0874a 617 SUPERFAMILY SSF100934 504 616 1.45E-33 T 12-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 Vc3S01_2637 a7ac6e5c3c9923f1da343c1288f0874a 617 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Vc3S01_2637 a7ac6e5c3c9923f1da343c1288f0874a 617 PRINTS PR00301 70kDa heat shock protein signature 48 60 9.4E-52 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Vc3S01_2637 a7ac6e5c3c9923f1da343c1288f0874a 617 PRINTS PR00301 70kDa heat shock protein signature 20 33 9.4E-52 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Vc3S01_2637 a7ac6e5c3c9923f1da343c1288f0874a 617 PRINTS PR00301 70kDa heat shock protein signature 360 380 9.4E-52 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Vc3S01_2637 a7ac6e5c3c9923f1da343c1288f0874a 617 PRINTS PR00301 70kDa heat shock protein signature 152 172 9.4E-52 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Vc3S01_2637 a7ac6e5c3c9923f1da343c1288f0874a 617 PRINTS PR00301 70kDa heat shock protein signature 466 482 9.4E-52 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Vc3S01_2637 a7ac6e5c3c9923f1da343c1288f0874a 617 PRINTS PR00301 70kDa heat shock protein signature 211 221 9.4E-52 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Vc3S01_2637 a7ac6e5c3c9923f1da343c1288f0874a 617 PRINTS PR00301 70kDa heat shock protein signature 385 404 9.4E-52 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Vc3S01_2637 a7ac6e5c3c9923f1da343c1288f0874a 617 PRINTS PR00301 70kDa heat shock protein signature 329 345 9.4E-52 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Vc3S01_2637 a7ac6e5c3c9923f1da343c1288f0874a 617 Gene3D G3DSA:3.30.420.40 23 374 6.7E-112 T 12-10-2018 Vc3S01_2637 a7ac6e5c3c9923f1da343c1288f0874a 617 Pfam PF00012 Hsp70 protein 22 601 1.5E-189 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Vc3S01_2637 a7ac6e5c3c9923f1da343c1288f0874a 617 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 615 4.4E-266 T 12-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 Vc3S01_2637 a7ac6e5c3c9923f1da343c1288f0874a 617 Gene3D G3DSA:3.30.420.40 194 361 6.7E-112 T 12-10-2018 Vc3S01_2637 a7ac6e5c3c9923f1da343c1288f0874a 617 SUPERFAMILY SSF53067 19 196 3.63E-51 T 12-10-2018 Vc3S01_2637 a7ac6e5c3c9923f1da343c1288f0874a 617 SUPERFAMILY SSF53067 200 377 5.59E-49 T 12-10-2018 Vc3S01_2637 a7ac6e5c3c9923f1da343c1288f0874a 617 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 617 46.235 T 12-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 Vc3S01_2637 a7ac6e5c3c9923f1da343c1288f0874a 617 Gene3D G3DSA:2.60.34.10 379 519 4.0E-49 T 12-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 Vc3S01_A0493 9988c3f9025b050090592071cf466345 696 SMART SM00052 433 675 1.0E-50 T 12-10-2018 IPR001633 EAL domain Vc3S01_A0493 9988c3f9025b050090592071cf466345 696 Pfam PF00563 EAL domain 440 670 2.6E-56 T 12-10-2018 IPR001633 EAL domain Vc3S01_A0493 9988c3f9025b050090592071cf466345 696 Pfam PF02378 Phosphotransferase system, EIIC 38 330 1.4E-12 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 Vc3S01_A0493 9988c3f9025b050090592071cf466345 696 Gene3D G3DSA:3.20.20.450 432 678 6.1E-62 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_A0493 9988c3f9025b050090592071cf466345 696 SUPERFAMILY SSF141868 439 680 1.31E-61 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_2992 256b30c61a072cb0a3a784463ab45844 313 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 309 1.2E-126 T 12-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 Vc3S01_2992 256b30c61a072cb0a3a784463ab45844 313 Gene3D G3DSA:3.90.25.10 173 295 1.4E-115 T 12-10-2018 Vc3S01_2992 256b30c61a072cb0a3a784463ab45844 313 Gene3D G3DSA:3.40.50.720 3 307 1.4E-115 T 12-10-2018 Vc3S01_2992 256b30c61a072cb0a3a784463ab45844 313 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 241 7.3E-45 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Vc3S01_2992 256b30c61a072cb0a3a784463ab45844 313 SUPERFAMILY SSF51735 1 308 1.19E-57 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_2992 256b30c61a072cb0a3a784463ab45844 313 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 313 46.235 T 12-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 Vc3S01_0043 49a35b2b883fe92723b708a669c319b3 326 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 87 4.7E-6 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Vc3S01_0043 49a35b2b883fe92723b708a669c319b3 326 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 3 326 1.8E-139 T 12-10-2018 IPR014188 Acrylyl-CoA reductase AcuI Vc3S01_0043 49a35b2b883fe92723b708a669c319b3 326 Gene3D G3DSA:3.90.180.10 17 325 1.2E-123 T 12-10-2018 Vc3S01_0043 49a35b2b883fe92723b708a669c319b3 326 Pfam PF00107 Zinc-binding dehydrogenase 159 275 6.0E-11 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Vc3S01_0043 49a35b2b883fe92723b708a669c319b3 326 SUPERFAMILY SSF51735 116 289 9.84E-35 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_0043 49a35b2b883fe92723b708a669c319b3 326 Gene3D G3DSA:3.40.50.720 126 294 1.2E-123 T 12-10-2018 Vc3S01_0043 49a35b2b883fe92723b708a669c319b3 326 SMART SM00829 13 324 1.6E-5 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Vc3S01_0043 49a35b2b883fe92723b708a669c319b3 326 SUPERFAMILY SSF50129 2 145 1.67E-44 T 12-10-2018 IPR011032 GroES-like superfamily Vc3S01_2845 cb56c75ebbcd07a7f5c8d439314bc28d 253 SUPERFAMILY SSF100950 78 234 6.8E-31 T 12-10-2018 IPR037171 NagB/RpiA transferase-like Vc3S01_2845 cb56c75ebbcd07a7f5c8d439314bc28d 253 ProSitePatterns PS00894 DeoR-type HTH domain signature. 9 43 - T 12-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 Vc3S01_2845 cb56c75ebbcd07a7f5c8d439314bc28d 253 Pfam PF00455 DeoR C terminal sensor domain 77 232 1.3E-44 T 12-10-2018 IPR014036 DeoR C-terminal sensor domain Vc3S01_2845 cb56c75ebbcd07a7f5c8d439314bc28d 253 Pfam PF08220 DeoR-like helix-turn-helix domain 9 62 1.3E-15 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Vc3S01_2845 cb56c75ebbcd07a7f5c8d439314bc28d 253 SMART SM01134 73 234 1.1E-56 T 12-10-2018 Vc3S01_2845 cb56c75ebbcd07a7f5c8d439314bc28d 253 Gene3D G3DSA:1.10.10.10 1 56 2.9E-5 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_2845 cb56c75ebbcd07a7f5c8d439314bc28d 253 SMART SM00420 9 61 4.0E-14 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Vc3S01_2845 cb56c75ebbcd07a7f5c8d439314bc28d 253 SUPERFAMILY SSF46785 4 66 1.76E-12 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_2845 cb56c75ebbcd07a7f5c8d439314bc28d 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 27 41 2.3E-6 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Vc3S01_2845 cb56c75ebbcd07a7f5c8d439314bc28d 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 41 59 2.3E-6 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Vc3S01_0908 8534e7754c2aa5d655f7705bbea42452 672 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 116 242 2.0E-46 T 12-10-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 MetaCyc: PWY-7892 Vc3S01_0908 8534e7754c2aa5d655f7705bbea42452 672 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 5 661 27.789 T 12-10-2018 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 Vc3S01_0908 8534e7754c2aa5d655f7705bbea42452 672 SUPERFAMILY SSF51905 266 663 1.13E-29 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_0908 8534e7754c2aa5d655f7705bbea42452 672 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 266 666 1.3E-153 T 12-10-2018 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 Vc3S01_0908 8534e7754c2aa5d655f7705bbea42452 672 Gene3D G3DSA:3.40.50.150 7 253 4.1E-107 T 12-10-2018 Vc3S01_0908 8534e7754c2aa5d655f7705bbea42452 672 Gene3D G3DSA:3.30.9.10 349 573 5.7E-133 T 12-10-2018 Vc3S01_0908 8534e7754c2aa5d655f7705bbea42452 672 Pfam PF01266 FAD dependent oxidoreductase 266 636 1.4E-45 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Vc3S01_0908 8534e7754c2aa5d655f7705bbea42452 672 Gene3D G3DSA:3.50.50.60 265 663 5.7E-133 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_0068 c87009708171b2d2b7e35938e422cc57 588 Pfam PF01019 Gamma-glutamyltranspeptidase 68 583 7.2E-164 T 12-10-2018 Vc3S01_0068 c87009708171b2d2b7e35938e422cc57 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 168 187 2.5E-65 T 12-10-2018 Vc3S01_0068 c87009708171b2d2b7e35938e422cc57 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 409 427 2.5E-65 T 12-10-2018 Vc3S01_0068 c87009708171b2d2b7e35938e422cc57 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 491 508 2.5E-65 T 12-10-2018 Vc3S01_0068 c87009708171b2d2b7e35938e422cc57 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 300 319 2.5E-65 T 12-10-2018 Vc3S01_0068 c87009708171b2d2b7e35938e422cc57 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 75 100 2.5E-65 T 12-10-2018 Vc3S01_0068 c87009708171b2d2b7e35938e422cc57 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 150 168 2.5E-65 T 12-10-2018 Vc3S01_0068 c87009708171b2d2b7e35938e422cc57 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 431 449 2.5E-65 T 12-10-2018 Vc3S01_0068 c87009708171b2d2b7e35938e422cc57 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 270 286 2.5E-65 T 12-10-2018 Vc3S01_0068 c87009708171b2d2b7e35938e422cc57 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 467 482 2.5E-65 T 12-10-2018 Vc3S01_0068 c87009708171b2d2b7e35938e422cc57 588 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 54 580 3.7E-140 T 12-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 Vc3S01_0068 c87009708171b2d2b7e35938e422cc57 588 Gene3D G3DSA:1.10.246.130 286 409 4.5E-40 T 12-10-2018 Vc3S01_0068 c87009708171b2d2b7e35938e422cc57 588 SUPERFAMILY SSF56235 45 587 1.93E-176 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Vc3S01_0068 c87009708171b2d2b7e35938e422cc57 588 Gene3D G3DSA:3.60.20.40 410 588 6.5E-59 T 12-10-2018 Vc3S01_A0583 ab6cd9093c06a4d90e6fc4231435a96b 652 Gene3D G3DSA:1.20.1530.20 2 399 2.6E-77 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily Vc3S01_A0583 ab6cd9093c06a4d90e6fc4231435a96b 652 Pfam PF00999 Sodium/hydrogen exchanger family 10 390 9.5E-58 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 Vc3S01_A0583 ab6cd9093c06a4d90e6fc4231435a96b 652 SUPERFAMILY SSF51735 419 559 1.24E-32 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_A0583 ab6cd9093c06a4d90e6fc4231435a96b 652 Pfam PF02254 TrkA-N domain 422 534 2.5E-24 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Vc3S01_A0583 ab6cd9093c06a4d90e6fc4231435a96b 652 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 12 303 1.4E-74 T 12-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 Vc3S01_A0583 ab6cd9093c06a4d90e6fc4231435a96b 652 Gene3D G3DSA:3.40.50.720 419 579 8.6E-35 T 12-10-2018 Vc3S01_A1950 723f842159f8fd96c76a77ec0442acf5 108 SUPERFAMILY SSF54292 20 99 1.7E-14 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Vc3S01_A1950 723f842159f8fd96c76a77ec0442acf5 108 Gene3D G3DSA:3.10.20.740 7 107 7.7E-11 T 12-10-2018 Vc3S01_A1950 723f842159f8fd96c76a77ec0442acf5 108 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 9 76 1.5E-4 T 12-10-2018 Vc3S01_2541 08c0f747a31ec71dab1a73df6b4f0c02 269 Pfam PF03180 NLPA lipoprotein 33 269 2.0E-97 T 12-10-2018 IPR004872 Lipoprotein NlpA family Vc3S01_2541 08c0f747a31ec71dab1a73df6b4f0c02 269 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 15 269 3.7E-124 T 12-10-2018 IPR004872 Lipoprotein NlpA family Vc3S01_2541 08c0f747a31ec71dab1a73df6b4f0c02 269 SUPERFAMILY SSF53850 32 269 9.15E-78 T 12-10-2018 Vc3S01_2541 08c0f747a31ec71dab1a73df6b4f0c02 269 Gene3D G3DSA:3.40.190.10 115 219 3.5E-93 T 12-10-2018 Vc3S01_2541 08c0f747a31ec71dab1a73df6b4f0c02 269 PIRSF PIRSF002854 1 269 4.2E-98 T 12-10-2018 IPR004872 Lipoprotein NlpA family Vc3S01_2541 08c0f747a31ec71dab1a73df6b4f0c02 269 Gene3D G3DSA:3.40.190.10 34 263 3.5E-93 T 12-10-2018 Vc3S01_3140 d69d82bbd79b46254e86a5a828635ad1 308 Gene3D G3DSA:1.10.10.10 1 90 8.2E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_3140 d69d82bbd79b46254e86a5a828635ad1 308 Gene3D G3DSA:3.40.190.10 92 298 2.5E-16 T 12-10-2018 Vc3S01_3140 d69d82bbd79b46254e86a5a828635ad1 308 SUPERFAMILY SSF53850 90 305 7.24E-18 T 12-10-2018 Vc3S01_3140 d69d82bbd79b46254e86a5a828635ad1 308 Gene3D G3DSA:3.40.190.10 173 274 2.5E-16 T 12-10-2018 Vc3S01_3140 d69d82bbd79b46254e86a5a828635ad1 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 66 5.3E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_3140 d69d82bbd79b46254e86a5a828635ad1 308 Pfam PF03466 LysR substrate binding domain 98 268 4.4E-11 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_3140 d69d82bbd79b46254e86a5a828635ad1 308 SUPERFAMILY SSF46785 7 89 1.7E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A1193 11d22fbafdeeedb891e7e8ee1007c6ed 553 Gene3D G3DSA:3.40.50.300 8 228 1.0E-59 T 12-10-2018 Vc3S01_A1193 11d22fbafdeeedb891e7e8ee1007c6ed 553 SMART SM00382 46 189 1.2E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_A1193 11d22fbafdeeedb891e7e8ee1007c6ed 553 Pfam PF07728 AAA domain (dynein-related subfamily) 49 179 1.8E-22 T 12-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 Vc3S01_A1193 11d22fbafdeeedb891e7e8ee1007c6ed 553 Pfam PF12592 Protein of unknown function (DUF3763) 483 535 2.9E-19 T 12-10-2018 IPR022547 ATPase, RavA, C-terminal GO:0042626 Vc3S01_A1193 11d22fbafdeeedb891e7e8ee1007c6ed 553 SUPERFAMILY SSF52540 18 294 4.86E-21 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A1193 11d22fbafdeeedb891e7e8ee1007c6ed 553 Gene3D G3DSA:1.10.8.300 229 301 2.4E-25 T 12-10-2018 Vc3S01_1096 c77e655e65749d624d073b080001fd49 415 PIRSF PIRSF000447 1 415 5.8E-204 T 12-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 Vc3S01_1096 c77e655e65749d624d073b080001fd49 415 SUPERFAMILY SSF53901 3 252 7.13E-80 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 Vc3S01_1096 c77e655e65749d624d073b080001fd49 415 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 411 3.4E-193 T 12-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 Vc3S01_1096 c77e655e65749d624d073b080001fd49 415 SMART SM00825 Beta-ketoacyl synthase 6 415 1.8E-15 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Vc3S01_1096 c77e655e65749d624d073b080001fd49 415 SUPERFAMILY SSF53901 215 413 5.38E-68 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 Vc3S01_1096 c77e655e65749d624d073b080001fd49 415 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 12-10-2018 IPR018201 Beta-ketoacyl synthase, active site Vc3S01_1096 c77e655e65749d624d073b080001fd49 415 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 370 1.4E-36 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Vc3S01_1096 c77e655e65749d624d073b080001fd49 415 Gene3D G3DSA:3.40.47.10 1 255 1.0E-91 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 Vc3S01_1096 c77e655e65749d624d073b080001fd49 415 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 4.5E-64 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Vc3S01_1096 c77e655e65749d624d073b080001fd49 415 Gene3D G3DSA:3.40.47.10 261 413 1.4E-50 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 Vc3S01_A0209 1568e10de4b10d24570846a778493668 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 402 412 1.1E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_A0209 1568e10de4b10d24570846a778493668 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 384 398 1.1E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_A0209 1568e10de4b10d24570846a778493668 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 437 1.1E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_A0209 1568e10de4b10d24570846a778493668 457 Gene3D G3DSA:1.10.287.130 182 299 5.2E-26 T 12-10-2018 Vc3S01_A0209 1568e10de4b10d24570846a778493668 457 Gene3D G3DSA:3.30.450.170 39 150 1.7E-7 T 12-10-2018 IPR038428 2-component histidine kinase, sensor domain superfamily Vc3S01_A0209 1568e10de4b10d24570846a778493668 457 SUPERFAMILY SSF47384 217 297 3.14E-14 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Vc3S01_A0209 1568e10de4b10d24570846a778493668 457 SMART SM00388 234 298 1.4E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_A0209 1568e10de4b10d24570846a778493668 457 SMART SM00387 343 457 6.4E-25 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_A0209 1568e10de4b10d24570846a778493668 457 Pfam PF00512 His Kinase A (phospho-acceptor) domain 235 297 1.1E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_A0209 1568e10de4b10d24570846a778493668 457 SMART SM00304 178 233 5.4E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Vc3S01_A0209 1568e10de4b10d24570846a778493668 457 Gene3D G3DSA:3.30.565.10 310 457 1.4E-29 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_A0209 1568e10de4b10d24570846a778493668 457 Pfam PF16750 Sensor domain of 2-component histidine kinase 49 149 1.1E-27 T 12-10-2018 IPR031930 2-component histidine kinase, sensor domain Vc3S01_A0209 1568e10de4b10d24570846a778493668 457 SUPERFAMILY SSF158472 178 230 4.45E-6 T 12-10-2018 Vc3S01_A0209 1568e10de4b10d24570846a778493668 457 SUPERFAMILY SSF55874 288 455 1.03E-33 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_A0209 1568e10de4b10d24570846a778493668 457 Pfam PF00672 HAMP domain 178 229 2.3E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Vc3S01_A0209 1568e10de4b10d24570846a778493668 457 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 346 454 7.6E-21 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_0414 8936a5e30e776fc497d5ba5df0361e9e 122 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 25 41 - T 12-10-2018 IPR002178 PTS EIIA type-2 domain Vc3S01_0414 8936a5e30e776fc497d5ba5df0361e9e 122 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 3 120 5.6E-34 T 12-10-2018 IPR002178 PTS EIIA type-2 domain Vc3S01_0414 8936a5e30e776fc497d5ba5df0361e9e 122 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 2 119 5.3E-44 T 12-10-2018 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 Vc3S01_0414 8936a5e30e776fc497d5ba5df0361e9e 122 Gene3D G3DSA:3.40.930.10 1 122 1.5E-44 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 Vc3S01_0414 8936a5e30e776fc497d5ba5df0361e9e 122 SUPERFAMILY SSF55804 3 119 4.58E-35 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 Vc3S01_A1318 2a9b94e40ff61767fa5581ca5c161ed6 374 PRINTS PR00075 Fatty acid desaturase family 1 signature 188 209 7.0E-32 T 12-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 Vc3S01_A1318 2a9b94e40ff61767fa5581ca5c161ed6 374 PRINTS PR00075 Fatty acid desaturase family 1 signature 37 59 7.0E-32 T 12-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 Vc3S01_A1318 2a9b94e40ff61767fa5581ca5c161ed6 374 PRINTS PR00075 Fatty acid desaturase family 1 signature 231 245 7.0E-32 T 12-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 Vc3S01_A1318 2a9b94e40ff61767fa5581ca5c161ed6 374 PRINTS PR00075 Fatty acid desaturase family 1 signature 60 80 7.0E-32 T 12-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 Vc3S01_A1318 2a9b94e40ff61767fa5581ca5c161ed6 374 PRINTS PR00075 Fatty acid desaturase family 1 signature 98 127 7.0E-32 T 12-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 Vc3S01_A1318 2a9b94e40ff61767fa5581ca5c161ed6 374 PIRSF PIRSF000345 4 331 7.3E-102 T 12-10-2018 IPR009160 Acyl-CoA desaturase, haem/steroid binding domain-containing GO:0004768|GO:0006636|GO:0016021 MetaCyc: PWY-5987|MetaCyc: PWY-5996 Vc3S01_A1318 2a9b94e40ff61767fa5581ca5c161ed6 374 Pfam PF00487 Fatty acid desaturase 45 262 2.4E-20 T 12-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 Vc3S01_1200 e49dcba4b1077b96915604cfd6d5e3e2 479 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 72 90 - T 12-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 Vc3S01_1200 e49dcba4b1077b96915604cfd6d5e3e2 479 Gene3D G3DSA:3.20.20.70 281 473 1.3E-174 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_1200 e49dcba4b1077b96915604cfd6d5e3e2 479 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 25 279 35.197 T 12-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 Vc3S01_1200 e49dcba4b1077b96915604cfd6d5e3e2 479 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 280 479 29.96 T 12-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 Vc3S01_1200 e49dcba4b1077b96915604cfd6d5e3e2 479 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 282 471 9.2E-57 T 12-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 Vc3S01_1200 e49dcba4b1077b96915604cfd6d5e3e2 479 Pfam PF00218 Indole-3-glycerol phosphate synthase 27 276 1.9E-95 T 12-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 Vc3S01_1200 e49dcba4b1077b96915604cfd6d5e3e2 479 SUPERFAMILY SSF51366 282 477 9.89E-54 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Vc3S01_1200 e49dcba4b1077b96915604cfd6d5e3e2 479 SUPERFAMILY SSF51366 23 276 1.18E-82 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Vc3S01_1200 e49dcba4b1077b96915604cfd6d5e3e2 479 Gene3D G3DSA:3.20.20.70 30 280 1.3E-174 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_A1413 e6c6a810094b4bb4c25f5e4767688567 566 Pfam PF05199 GMC oxidoreductase 388 526 1.6E-39 T 12-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 Vc3S01_A1413 e6c6a810094b4bb4c25f5e4767688567 566 SUPERFAMILY SSF54373 292 474 3.83E-60 T 12-10-2018 Vc3S01_A1413 e6c6a810094b4bb4c25f5e4767688567 566 Gene3D G3DSA:3.50.50.60 4 530 4.8E-175 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_A1413 e6c6a810094b4bb4c25f5e4767688567 566 PIRSF PIRSF000137 1 541 4.3E-145 T 12-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 Vc3S01_A1413 e6c6a810094b4bb4c25f5e4767688567 566 SUPERFAMILY SSF51905 1 533 4.7E-84 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_A1413 e6c6a810094b4bb4c25f5e4767688567 566 Gene3D G3DSA:1.10.1220.110 97 150 4.8E-175 T 12-10-2018 Vc3S01_A1413 e6c6a810094b4bb4c25f5e4767688567 566 Hamap MF_00750 Oxygen-dependent choline dehydrogenase [betA]. 3 553 59.642 T 12-10-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 Vc3S01_A1413 e6c6a810094b4bb4c25f5e4767688567 566 TIGRFAM TIGR01810 betA: choline dehydrogenase 6 533 1.4E-232 T 12-10-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 Vc3S01_A1413 e6c6a810094b4bb4c25f5e4767688567 566 Pfam PF00732 GMC oxidoreductase 5 297 1.8E-87 T 12-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 Vc3S01_A1413 e6c6a810094b4bb4c25f5e4767688567 566 Gene3D G3DSA:3.30.410.40 151 471 4.8E-175 T 12-10-2018 Vc3S01_A1413 e6c6a810094b4bb4c25f5e4767688567 566 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 82 105 - T 12-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 Vc3S01_A1413 e6c6a810094b4bb4c25f5e4767688567 566 Gene3D G3DSA:4.10.450.10 38 198 4.8E-175 T 12-10-2018 IPR027424 Glucose Oxidase, domain 2 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 Vc3S01_0728 06a703c1214cac55b34b93d646b4564a 445 Gene3D G3DSA:3.40.630.30 297 445 2.2E-35 T 12-10-2018 Vc3S01_0728 06a703c1214cac55b34b93d646b4564a 445 Pfam PF00696 Amino acid kinase family 25 270 3.2E-28 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Vc3S01_0728 06a703c1214cac55b34b93d646b4564a 445 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 445 222.776 T 12-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 Vc3S01_0728 06a703c1214cac55b34b93d646b4564a 445 Gene3D G3DSA:3.40.1160.10 7 296 1.5E-84 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Vc3S01_0728 06a703c1214cac55b34b93d646b4564a 445 SUPERFAMILY SSF53633 4 294 3.77E-67 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Vc3S01_0728 06a703c1214cac55b34b93d646b4564a 445 Pfam PF00583 Acetyltransferase (GNAT) family 333 416 5.0E-7 T 12-10-2018 IPR000182 GNAT domain Vc3S01_0728 06a703c1214cac55b34b93d646b4564a 445 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 8 444 1.0E-201 T 12-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 Vc3S01_0728 06a703c1214cac55b34b93d646b4564a 445 SUPERFAMILY SSF55729 300 425 4.01E-16 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_0728 06a703c1214cac55b34b93d646b4564a 445 PIRSF PIRSF000423 1 445 1.5E-203 T 12-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 Vc3S01_2323 69bf009f892eaabaa730e68b1d531fff 426 Pfam PF07724 AAA domain (Cdc48 subfamily) 114 312 1.2E-48 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Vc3S01_2323 69bf009f892eaabaa730e68b1d531fff 426 SMART SM00382 113 266 2.0E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_2323 69bf009f892eaabaa730e68b1d531fff 426 SMART SM00994 13 52 1.0E-24 T 12-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 Vc3S01_2323 69bf009f892eaabaa730e68b1d531fff 426 SUPERFAMILY SSF57716 14 49 5.84E-12 T 12-10-2018 Vc3S01_2323 69bf009f892eaabaa730e68b1d531fff 426 SMART SM01086 319 414 5.9E-34 T 12-10-2018 IPR019489 Clp ATPase, C-terminal Vc3S01_2323 69bf009f892eaabaa730e68b1d531fff 426 Gene3D G3DSA:1.10.8.60 318 426 2.6E-41 T 12-10-2018 Vc3S01_2323 69bf009f892eaabaa730e68b1d531fff 426 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 12 414 3.8E-209 T 12-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 Vc3S01_2323 69bf009f892eaabaa730e68b1d531fff 426 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 5 417 53.304 T 12-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 Vc3S01_2323 69bf009f892eaabaa730e68b1d531fff 426 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 319 396 8.1E-16 T 12-10-2018 IPR019489 Clp ATPase, C-terminal Vc3S01_2323 69bf009f892eaabaa730e68b1d531fff 426 Gene3D G3DSA:3.30.50.30 2 53 1.4E-26 T 12-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily Vc3S01_2323 69bf009f892eaabaa730e68b1d531fff 426 SUPERFAMILY SSF52540 63 404 8.01E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2323 69bf009f892eaabaa730e68b1d531fff 426 Gene3D G3DSA:3.40.50.300 59 317 1.0E-108 T 12-10-2018 Vc3S01_2323 69bf009f892eaabaa730e68b1d531fff 426 Pfam PF06689 ClpX C4-type zinc finger 14 51 1.2E-20 T 12-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 Vc3S01_0305 4afe82b70cbeab4d07309df64d9cf148 378 SUPERFAMILY SSF55031 177 290 1.47E-22 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Vc3S01_0305 4afe82b70cbeab4d07309df64d9cf148 378 SUPERFAMILY SSF53187 3 377 2.06E-57 T 12-10-2018 Vc3S01_0305 4afe82b70cbeab4d07309df64d9cf148 378 Pfam PF01546 Peptidase family M20/M25/M40 72 374 2.4E-32 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 Vc3S01_0305 4afe82b70cbeab4d07309df64d9cf148 378 Gene3D G3DSA:3.40.630.10 28 360 4.6E-79 T 12-10-2018 Vc3S01_0305 4afe82b70cbeab4d07309df64d9cf148 378 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 71 80 - T 12-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 Vc3S01_0305 4afe82b70cbeab4d07309df64d9cf148 378 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 106 143 - T 12-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 Vc3S01_0305 4afe82b70cbeab4d07309df64d9cf148 378 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 8 372 2.0E-128 T 12-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 Vc3S01_0305 4afe82b70cbeab4d07309df64d9cf148 378 Pfam PF07687 Peptidase dimerisation domain 174 285 5.9E-26 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain Vc3S01_0305 4afe82b70cbeab4d07309df64d9cf148 378 Gene3D G3DSA:3.30.70.360 177 292 4.6E-79 T 12-10-2018 Vc3S01_0305 4afe82b70cbeab4d07309df64d9cf148 378 Hamap MF_01108 Acetylornithine deacetylase [argE]. 1 378 65.712 T 12-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 Vc3S01_1573 dbc3fa0aafd5a0b821606dab5bf25ff8 868 Gene3D G3DSA:1.10.1780.10 1 160 7.9E-35 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Vc3S01_1573 dbc3fa0aafd5a0b821606dab5bf25ff8 868 SUPERFAMILY SSF52540 548 838 1.57E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_1573 dbc3fa0aafd5a0b821606dab5bf25ff8 868 SMART SM00382 215 361 2.8E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_1573 dbc3fa0aafd5a0b821606dab5bf25ff8 868 SMART SM00382 599 759 2.2E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_1573 dbc3fa0aafd5a0b821606dab5bf25ff8 868 SMART SM01086 771 863 3.6E-4 T 12-10-2018 IPR019489 Clp ATPase, C-terminal Vc3S01_1573 dbc3fa0aafd5a0b821606dab5bf25ff8 868 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 311 323 - T 12-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 Vc3S01_1573 dbc3fa0aafd5a0b821606dab5bf25ff8 868 Gene3D G3DSA:3.40.50.300 165 359 5.4E-62 T 12-10-2018 Vc3S01_1573 dbc3fa0aafd5a0b821606dab5bf25ff8 868 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 28 73 1.1E-4 T 12-10-2018 IPR004176 Clp, N-terminal Vc3S01_1573 dbc3fa0aafd5a0b821606dab5bf25ff8 868 SUPERFAMILY SSF81923 12 125 1.44E-18 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Vc3S01_1573 dbc3fa0aafd5a0b821606dab5bf25ff8 868 SUPERFAMILY SSF52540 176 512 9.4E-73 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_1573 dbc3fa0aafd5a0b821606dab5bf25ff8 868 Gene3D G3DSA:3.40.50.300 360 546 4.1E-42 T 12-10-2018 Vc3S01_1573 dbc3fa0aafd5a0b821606dab5bf25ff8 868 Pfam PF07724 AAA domain (Cdc48 subfamily) 598 765 4.8E-40 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Vc3S01_1573 dbc3fa0aafd5a0b821606dab5bf25ff8 868 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 677 695 2.3E-29 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 Vc3S01_1573 dbc3fa0aafd5a0b821606dab5bf25ff8 868 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 648 666 2.3E-29 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 Vc3S01_1573 dbc3fa0aafd5a0b821606dab5bf25ff8 868 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 710 724 2.3E-29 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 Vc3S01_1573 dbc3fa0aafd5a0b821606dab5bf25ff8 868 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 603 621 2.3E-29 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 Vc3S01_1573 dbc3fa0aafd5a0b821606dab5bf25ff8 868 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 771 845 2.6E-11 T 12-10-2018 IPR019489 Clp ATPase, C-terminal Vc3S01_1573 dbc3fa0aafd5a0b821606dab5bf25ff8 868 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 13 855 0.0 T 12-10-2018 IPR017729 Type VI secretion system, ATPase ClpV1 Vc3S01_1573 dbc3fa0aafd5a0b821606dab5bf25ff8 868 Gene3D G3DSA:1.10.8.60 771 865 3.6E-11 T 12-10-2018 Vc3S01_1573 dbc3fa0aafd5a0b821606dab5bf25ff8 868 Gene3D G3DSA:3.40.50.300 552 769 1.8E-67 T 12-10-2018 Vc3S01_1573 dbc3fa0aafd5a0b821606dab5bf25ff8 868 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 220 353 4.3E-10 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Vc3S01_1235 6c8983f4c030b8a73e80ed7f52665ca2 90 Pfam PF00578 AhpC/TSA family 3 65 4.2E-5 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Vc3S01_1235 6c8983f4c030b8a73e80ed7f52665ca2 90 SUPERFAMILY SSF52833 3 86 9.56E-17 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Vc3S01_1235 6c8983f4c030b8a73e80ed7f52665ca2 90 Gene3D G3DSA:3.40.30.10 1 87 1.8E-16 T 12-10-2018 Vc3S01_1156 d4058635b44de2a25597a9f094e3576f 204 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 7 175 4.1E-29 T 12-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Vc3S01_1156 d4058635b44de2a25597a9f094e3576f 204 SMART SM00479 6 173 3.2E-41 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Vc3S01_1156 d4058635b44de2a25597a9f094e3576f 204 SUPERFAMILY SSF53098 4 177 2.0E-52 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Vc3S01_1156 d4058635b44de2a25597a9f094e3576f 204 Pfam PF00929 Exonuclease 8 163 1.9E-30 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Vc3S01_1156 d4058635b44de2a25597a9f094e3576f 204 Gene3D G3DSA:3.30.420.10 2 175 8.8E-48 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Vc3S01_A0953 a7fdbbf812b3131e7aeaff91b15d7105 839 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 244 258 3.8E-9 T 12-10-2018 Vc3S01_A0953 a7fdbbf812b3131e7aeaff91b15d7105 839 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 285 292 3.8E-9 T 12-10-2018 Vc3S01_A0953 a7fdbbf812b3131e7aeaff91b15d7105 839 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 15 37 3.8E-9 T 12-10-2018 Vc3S01_A0953 a7fdbbf812b3131e7aeaff91b15d7105 839 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 157 182 3.8E-9 T 12-10-2018 Vc3S01_A0953 a7fdbbf812b3131e7aeaff91b15d7105 839 SUPERFAMILY SSF51905 159 319 7.67E-24 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_A0953 a7fdbbf812b3131e7aeaff91b15d7105 839 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 16 803 0.0 T 12-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 Vc3S01_A0953 a7fdbbf812b3131e7aeaff91b15d7105 839 Gene3D G3DSA:3.50.50.60 120 255 4.0E-85 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_A0953 a7fdbbf812b3131e7aeaff91b15d7105 839 PRINTS PR00397 Sirohaem Fe-binding site signature 639 657 8.7E-7 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Vc3S01_A0953 a7fdbbf812b3131e7aeaff91b15d7105 839 PRINTS PR00397 Sirohaem Fe-binding site signature 682 700 8.7E-7 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Vc3S01_A0953 a7fdbbf812b3131e7aeaff91b15d7105 839 SUPERFAMILY SSF55124 505 644 1.31E-27 T 12-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Vc3S01_A0953 a7fdbbf812b3131e7aeaff91b15d7105 839 SUPERFAMILY SSF51905 14 199 2.0E-42 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_A0953 a7fdbbf812b3131e7aeaff91b15d7105 839 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 563 624 1.6E-11 T 12-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Vc3S01_A0953 a7fdbbf812b3131e7aeaff91b15d7105 839 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 682 698 - T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Vc3S01_A0953 a7fdbbf812b3131e7aeaff91b15d7105 839 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 15 294 4.4E-52 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Vc3S01_A0953 a7fdbbf812b3131e7aeaff91b15d7105 839 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 243 259 4.8E-17 T 12-10-2018 Vc3S01_A0953 a7fdbbf812b3131e7aeaff91b15d7105 839 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 112 130 4.8E-17 T 12-10-2018 Vc3S01_A0953 a7fdbbf812b3131e7aeaff91b15d7105 839 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 270 292 4.8E-17 T 12-10-2018 Vc3S01_A0953 a7fdbbf812b3131e7aeaff91b15d7105 839 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 16 35 4.8E-17 T 12-10-2018 Vc3S01_A0953 a7fdbbf812b3131e7aeaff91b15d7105 839 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 157 175 4.8E-17 T 12-10-2018 Vc3S01_A0953 a7fdbbf812b3131e7aeaff91b15d7105 839 Pfam PF04324 BFD-like [2Fe-2S] binding domain 426 474 3.0E-14 T 12-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain Vc3S01_A0953 a7fdbbf812b3131e7aeaff91b15d7105 839 Gene3D G3DSA:1.10.10.1100 425 480 8.2E-12 T 12-10-2018 Vc3S01_A0953 a7fdbbf812b3131e7aeaff91b15d7105 839 SUPERFAMILY SSF56014 636 810 1.57E-49 T 12-10-2018 Vc3S01_A0953 a7fdbbf812b3131e7aeaff91b15d7105 839 PIRSF PIRSF037149 9 838 0.0 T 12-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 Vc3S01_A0953 a7fdbbf812b3131e7aeaff91b15d7105 839 Gene3D G3DSA:3.50.50.60 17 292 4.0E-85 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_A0953 a7fdbbf812b3131e7aeaff91b15d7105 839 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 635 760 1.1E-18 T 12-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Vc3S01_A0953 a7fdbbf812b3131e7aeaff91b15d7105 839 Gene3D G3DSA:3.30.413.10 634 796 1.3E-34 T 12-10-2018 Vc3S01_3057 c6d093cd9c39799a52be0939f23ad10f 201 SUPERFAMILY SSF54523 7 92 8.63E-10 T 12-10-2018 Vc3S01_3057 c6d093cd9c39799a52be0939f23ad10f 201 Pfam PF12019 Type II transport protein GspH 42 182 1.7E-8 T 12-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 Vc3S01_3057 c6d093cd9c39799a52be0939f23ad10f 201 Gene3D G3DSA:3.55.40.10 33 200 2.7E-46 T 12-10-2018 Vc3S01_3057 c6d093cd9c39799a52be0939f23ad10f 201 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 3.3E-5 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Vc3S01_3057 c6d093cd9c39799a52be0939f23ad10f 201 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 5 185 1.0E-12 T 12-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 Vc3S01_3057 c6d093cd9c39799a52be0939f23ad10f 201 PRINTS PR00885 Bacterial general secretion pathway protein H signature 145 160 6.6E-21 T 12-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 Vc3S01_3057 c6d093cd9c39799a52be0939f23ad10f 201 PRINTS PR00885 Bacterial general secretion pathway protein H signature 17 31 6.6E-21 T 12-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 Vc3S01_3057 c6d093cd9c39799a52be0939f23ad10f 201 PRINTS PR00885 Bacterial general secretion pathway protein H signature 2 16 6.6E-21 T 12-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 Vc3S01_3057 c6d093cd9c39799a52be0939f23ad10f 201 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 27 8.0E-5 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Vc3S01_A0736 9b6e05a7204ec6fe52bc8d3e84143583 152 SUPERFAMILY SSF48695 36 149 1.95E-40 T 12-10-2018 IPR036280 Multiheme cytochrome superfamily Vc3S01_A0736 9b6e05a7204ec6fe52bc8d3e84143583 152 PIRSF PIRSF006105 2 152 3.6E-46 T 12-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB Vc3S01_A0736 9b6e05a7204ec6fe52bc8d3e84143583 152 Gene3D G3DSA:1.10.1130.10 66 133 8.2E-29 T 12-10-2018 Vc3S01_A0736 9b6e05a7204ec6fe52bc8d3e84143583 152 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 33 146 2.8E-47 T 12-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB Vc3S01_A1886 1db0ea7051bbef544954cd3ff4d61dfe 401 SUPERFAMILY SSF53901 271 400 1.25E-35 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 Vc3S01_A1886 1db0ea7051bbef544954cd3ff4d61dfe 401 Pfam PF02803 Thiolase, C-terminal domain 270 399 1.4E-41 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 Vc3S01_A1886 1db0ea7051bbef544954cd3ff4d61dfe 401 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 399 5.4E-141 T 12-10-2018 IPR002155 Thiolase GO:0016747 Vc3S01_A1886 1db0ea7051bbef544954cd3ff4d61dfe 401 ProSitePatterns PS00737 Thiolases signature 2. 347 363 - T 12-10-2018 IPR020613 Thiolase, conserved site GO:0016747 Vc3S01_A1886 1db0ea7051bbef544954cd3ff4d61dfe 401 PIRSF PIRSF000429 1 401 1.6E-126 T 12-10-2018 IPR002155 Thiolase GO:0016747 Vc3S01_A1886 1db0ea7051bbef544954cd3ff4d61dfe 401 Pfam PF00108 Thiolase, N-terminal domain 4 263 1.1E-100 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 Vc3S01_A1886 1db0ea7051bbef544954cd3ff4d61dfe 401 Gene3D G3DSA:3.40.47.10 126 398 3.4E-146 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 Vc3S01_A1886 1db0ea7051bbef544954cd3ff4d61dfe 401 ProSitePatterns PS00099 Thiolases active site. 382 395 - T 12-10-2018 IPR020610 Thiolase, active site GO:0016747 Vc3S01_A1886 1db0ea7051bbef544954cd3ff4d61dfe 401 SUPERFAMILY SSF53901 4 270 1.41E-84 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 Vc3S01_A1886 1db0ea7051bbef544954cd3ff4d61dfe 401 Gene3D G3DSA:3.40.47.10 6 276 3.4E-146 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 Vc3S01_A1935 ae720a1f53369937a39ef871f5f42411 331 Gene3D G3DSA:3.30.1330.60 203 329 2.1E-10 T 12-10-2018 IPR036737 OmpA-like domain superfamily Vc3S01_A1935 ae720a1f53369937a39ef871f5f42411 331 Gene3D G3DSA:2.40.160.20 39 192 3.8E-8 T 12-10-2018 Vc3S01_A1935 ae720a1f53369937a39ef871f5f42411 331 SUPERFAMILY SSF103088 216 302 1.44E-11 T 12-10-2018 IPR036737 OmpA-like domain superfamily Vc3S01_A1935 ae720a1f53369937a39ef871f5f42411 331 Pfam PF00691 OmpA family 231 309 1.8E-7 T 12-10-2018 IPR006665 OmpA-like domain Vc3S01_1038 6eb4289af2981bc24fd7427625824d11 910 Pfam PF13375 RnfC Barrel sandwich hybrid domain 14 115 8.6E-34 T 12-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain Vc3S01_1038 6eb4289af2981bc24fd7427625824d11 910 Gene3D G3DSA:1.10.1060.10 367 445 8.9E-12 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Vc3S01_1038 6eb4289af2981bc24fd7427625824d11 910 Pfam PF10531 SLBB domain 296 345 1.0E-8 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Vc3S01_1038 6eb4289af2981bc24fd7427625824d11 910 Pfam PF12838 4Fe-4S dicluster domain 378 430 1.3E-7 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Vc3S01_1038 6eb4289af2981bc24fd7427625824d11 910 Gene3D G3DSA:3.40.50.11540 145 290 1.0E-12 T 12-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Vc3S01_1038 6eb4289af2981bc24fd7427625824d11 910 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 417 428 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Vc3S01_1038 6eb4289af2981bc24fd7427625824d11 910 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 13 447 9.1E-188 T 12-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 Vc3S01_1038 6eb4289af2981bc24fd7427625824d11 910 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 140 283 3.2E-47 T 12-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Vc3S01_1038 6eb4289af2981bc24fd7427625824d11 910 SUPERFAMILY SSF46548 336 446 7.85E-21 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Vc3S01_1038 6eb4289af2981bc24fd7427625824d11 910 SUPERFAMILY SSF142019 95 302 2.22E-59 T 12-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Vc3S01_1038 6eb4289af2981bc24fd7427625824d11 910 Hamap MF_00461 Ion-translocating oxidoreductase complex subunit C [rsxC]. 1 760 248.548 T 12-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 Vc3S01_0125 e215ca2214fe5e066bd1903a42fe1729 285 Gene3D G3DSA:1.20.140.160 131 283 7.7E-15 T 12-10-2018 Vc3S01_0125 e215ca2214fe5e066bd1903a42fe1729 285 Pfam PF04542 Sigma-70 region 2 53 122 6.4E-17 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Vc3S01_0125 e215ca2214fe5e066bd1903a42fe1729 285 PRINTS PR00046 Major sigma-70 factor signature 267 278 1.1E-18 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Vc3S01_0125 e215ca2214fe5e066bd1903a42fe1729 285 PRINTS PR00046 Major sigma-70 factor signature 77 90 1.1E-18 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Vc3S01_0125 e215ca2214fe5e066bd1903a42fe1729 285 PRINTS PR00046 Major sigma-70 factor signature 233 245 1.1E-18 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Vc3S01_0125 e215ca2214fe5e066bd1903a42fe1729 285 PRINTS PR00046 Major sigma-70 factor signature 252 267 1.1E-18 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Vc3S01_0125 e215ca2214fe5e066bd1903a42fe1729 285 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 77 90 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Vc3S01_0125 e215ca2214fe5e066bd1903a42fe1729 285 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 15 282 2.8E-126 T 12-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 Vc3S01_0125 e215ca2214fe5e066bd1903a42fe1729 285 SUPERFAMILY SSF88659 196 281 2.43E-18 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Vc3S01_0125 e215ca2214fe5e066bd1903a42fe1729 285 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 284 53.032 T 12-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 Vc3S01_0125 e215ca2214fe5e066bd1903a42fe1729 285 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 252 278 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Vc3S01_0125 e215ca2214fe5e066bd1903a42fe1729 285 SUPERFAMILY SSF88946 11 122 1.31E-39 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Vc3S01_0125 e215ca2214fe5e066bd1903a42fe1729 285 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 48 280 1.7E-33 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Vc3S01_0125 e215ca2214fe5e066bd1903a42fe1729 285 Gene3D G3DSA:1.20.120.1810 11 122 4.1E-26 T 12-10-2018 Vc3S01_0125 e215ca2214fe5e066bd1903a42fe1729 285 Pfam PF04545 Sigma-70, region 4 229 279 2.2E-15 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Vc3S01_0125 e215ca2214fe5e066bd1903a42fe1729 285 Pfam PF00140 Sigma-70 factor, region 1.2 14 40 1.7E-7 T 12-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Vc3S01_2102 d2bae830d5e797e200e38565c90f508c 726 SUPERFAMILY SSF48113 435 726 3.39E-105 T 12-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 Vc3S01_2102 d2bae830d5e797e200e38565c90f508c 726 SUPERFAMILY SSF48113 17 429 6.19E-153 T 12-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 Vc3S01_2102 d2bae830d5e797e200e38565c90f508c 726 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 50 63 3.8E-52 T 12-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 Vc3S01_2102 d2bae830d5e797e200e38565c90f508c 726 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 24 46 3.8E-52 T 12-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 Vc3S01_2102 d2bae830d5e797e200e38565c90f508c 726 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 479 505 3.8E-52 T 12-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 Vc3S01_2102 d2bae830d5e797e200e38565c90f508c 726 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 65 90 3.8E-52 T 12-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 Vc3S01_2102 d2bae830d5e797e200e38565c90f508c 726 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 265 288 3.8E-52 T 12-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 Vc3S01_2102 d2bae830d5e797e200e38565c90f508c 726 Gene3D G3DSA:1.10.520.10 26 430 2.0E-218 T 12-10-2018 Vc3S01_2102 d2bae830d5e797e200e38565c90f508c 726 Gene3D G3DSA:1.10.420.10 581 702 2.5E-140 T 12-10-2018 Vc3S01_2102 d2bae830d5e797e200e38565c90f508c 726 Gene3D G3DSA:1.10.520.10 431 726 2.5E-140 T 12-10-2018 Vc3S01_2102 d2bae830d5e797e200e38565c90f508c 726 PRINTS PR00458 Haem peroxidase superfamily signature 166 178 3.0E-18 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Vc3S01_2102 d2bae830d5e797e200e38565c90f508c 726 PRINTS PR00458 Haem peroxidase superfamily signature 316 331 3.0E-18 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Vc3S01_2102 d2bae830d5e797e200e38565c90f508c 726 PRINTS PR00458 Haem peroxidase superfamily signature 88 102 3.0E-18 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Vc3S01_2102 d2bae830d5e797e200e38565c90f508c 726 PRINTS PR00458 Haem peroxidase superfamily signature 148 165 3.0E-18 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Vc3S01_2102 d2bae830d5e797e200e38565c90f508c 726 PRINTS PR00458 Haem peroxidase superfamily signature 257 272 3.0E-18 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Vc3S01_2102 d2bae830d5e797e200e38565c90f508c 726 Hamap MF_01961 Catalase-peroxidase [katG]. 5 726 39.758 T 12-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 Vc3S01_2102 d2bae830d5e797e200e38565c90f508c 726 ProSitePatterns PS00436 Peroxidases active site signature. 88 99 - T 12-10-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 Vc3S01_2102 d2bae830d5e797e200e38565c90f508c 726 Gene3D G3DSA:1.10.420.20 189 395 2.0E-218 T 12-10-2018 Vc3S01_2102 d2bae830d5e797e200e38565c90f508c 726 Pfam PF00141 Peroxidase 404 701 2.6E-35 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Vc3S01_2102 d2bae830d5e797e200e38565c90f508c 726 Pfam PF00141 Peroxidase 66 395 2.5E-50 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Vc3S01_2102 d2bae830d5e797e200e38565c90f508c 726 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 8 726 0.0 T 12-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 Vc3S01_A1338 9e0364b573684bfa84b9dd5e82e48364 180 Gene3D G3DSA:1.10.520.20 2 109 1.2E-25 T 12-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_A1338 9e0364b573684bfa84b9dd5e82e48364 180 PRINTS PR00125 ATP synthase delta subunit signature 153 171 9.8E-23 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_A1338 9e0364b573684bfa84b9dd5e82e48364 180 PRINTS PR00125 ATP synthase delta subunit signature 138 153 9.8E-23 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_A1338 9e0364b573684bfa84b9dd5e82e48364 180 PRINTS PR00125 ATP synthase delta subunit signature 7 26 9.8E-23 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_A1338 9e0364b573684bfa84b9dd5e82e48364 180 PRINTS PR00125 ATP synthase delta subunit signature 77 88 9.8E-23 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_A1338 9e0364b573684bfa84b9dd5e82e48364 180 PRINTS PR00125 ATP synthase delta subunit signature 88 102 9.8E-23 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_A1338 9e0364b573684bfa84b9dd5e82e48364 180 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 178 8.5E-40 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_A1338 9e0364b573684bfa84b9dd5e82e48364 180 SUPERFAMILY SSF47928 3 108 1.44E-15 T 12-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_A1338 9e0364b573684bfa84b9dd5e82e48364 180 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 180 17.667 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_A1338 9e0364b573684bfa84b9dd5e82e48364 180 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 178 3.3E-34 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_A1092 02172fbbe0a3c3d4e1ebeb740f6e2273 477 Gene3D G3DSA:3.50.50.60 7 96 5.2E-8 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_A1092 02172fbbe0a3c3d4e1ebeb740f6e2273 477 SUPERFAMILY SSF51905 9 295 5.72E-20 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_A1092 02172fbbe0a3c3d4e1ebeb740f6e2273 477 SUPERFAMILY SSF51735 11 131 1.09E-6 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_A1092 02172fbbe0a3c3d4e1ebeb740f6e2273 477 Pfam PF01266 FAD dependent oxidoreductase 12 372 9.3E-10 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Vc3S01_A0136 9aefad0c1cee94953d2ee7441293cce9 171 Pfam PF13412 Winged helix-turn-helix DNA-binding 26 73 3.1E-18 T 12-10-2018 Vc3S01_A0136 9aefad0c1cee94953d2ee7441293cce9 171 Pfam PF01037 Lrp/AsnC ligand binding domain 92 166 4.5E-16 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Vc3S01_A0136 9aefad0c1cee94953d2ee7441293cce9 171 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 53 72 3.2E-17 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Vc3S01_A0136 9aefad0c1cee94953d2ee7441293cce9 171 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 42 53 3.2E-17 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Vc3S01_A0136 9aefad0c1cee94953d2ee7441293cce9 171 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 26 42 3.2E-17 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Vc3S01_A0136 9aefad0c1cee94953d2ee7441293cce9 171 Gene3D G3DSA:3.30.70.920 80 162 3.0E-19 T 12-10-2018 Vc3S01_A0136 9aefad0c1cee94953d2ee7441293cce9 171 SUPERFAMILY SSF54909 88 170 7.24E-16 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel Vc3S01_A0136 9aefad0c1cee94953d2ee7441293cce9 171 Gene3D G3DSA:1.10.10.10 16 79 7.4E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A0136 9aefad0c1cee94953d2ee7441293cce9 171 SUPERFAMILY SSF46785 25 85 6.11E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A0136 9aefad0c1cee94953d2ee7441293cce9 171 ProSitePatterns PS00519 AsnC-type HTH domain signature. 44 70 - T 12-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site Vc3S01_A0136 9aefad0c1cee94953d2ee7441293cce9 171 SMART SM00344 26 135 1.9E-35 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 Vc3S01_2829 ed51cd802064d3aa2da3b8f741c4e2cd 586 Gene3D G3DSA:1.10.860.10 444 586 7.0E-59 T 12-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal Vc3S01_2829 ed51cd802064d3aa2da3b8f741c4e2cd 586 Pfam PF01807 CHC2 zinc finger 6 101 2.9E-41 T 12-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 Vc3S01_2829 ed51cd802064d3aa2da3b8f741c4e2cd 586 Hamap MF_00974 DNA primase [dnaG]. 4 582 29.188 T 12-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 Vc3S01_2829 ed51cd802064d3aa2da3b8f741c4e2cd 586 PIRSF PIRSF002811 2 585 1.4E-143 T 12-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 Vc3S01_2829 ed51cd802064d3aa2da3b8f741c4e2cd 586 SMART SM00400 36 90 5.7E-37 T 12-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 Vc3S01_2829 ed51cd802064d3aa2da3b8f741c4e2cd 586 Pfam PF08275 DNA primase catalytic core, N-terminal domain 133 257 9.5E-42 T 12-10-2018 IPR013264 DNA primase, catalytic core, N-terminal Vc3S01_2829 ed51cd802064d3aa2da3b8f741c4e2cd 586 Pfam PF08278 DNA primase DnaG DnaB-binding 457 580 1.3E-36 T 12-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 Vc3S01_2829 ed51cd802064d3aa2da3b8f741c4e2cd 586 Pfam PF13155 Toprim-like 270 356 2.1E-13 T 12-10-2018 Vc3S01_2829 ed51cd802064d3aa2da3b8f741c4e2cd 586 SMART SM00493 266 337 4.9E-19 T 12-10-2018 IPR006171 TOPRIM domain Vc3S01_2829 ed51cd802064d3aa2da3b8f741c4e2cd 586 SUPERFAMILY SSF56731 123 431 1.44E-110 T 12-10-2018 Vc3S01_2829 ed51cd802064d3aa2da3b8f741c4e2cd 586 TIGRFAM TIGR01391 dnaG: DNA primase 5 425 1.5E-146 T 12-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 Vc3S01_2829 ed51cd802064d3aa2da3b8f741c4e2cd 586 Gene3D G3DSA:3.90.580.10 1 102 1.5E-39 T 12-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 Vc3S01_2829 ed51cd802064d3aa2da3b8f741c4e2cd 586 Gene3D G3DSA:3.90.980.10 122 247 5.2E-46 T 12-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily Vc3S01_2829 ed51cd802064d3aa2da3b8f741c4e2cd 586 Pfam PF10410 DnaB-helicase binding domain of primase 377 431 8.2E-8 T 12-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 Vc3S01_2829 ed51cd802064d3aa2da3b8f741c4e2cd 586 SUPERFAMILY SSF57783 4 101 4.93E-38 T 12-10-2018 Vc3S01_2829 ed51cd802064d3aa2da3b8f741c4e2cd 586 Gene3D G3DSA:1.20.50.20 375 433 3.1E-8 T 12-10-2018 Vc3S01_2829 ed51cd802064d3aa2da3b8f741c4e2cd 586 SUPERFAMILY SSF117023 453 584 4.97E-45 T 12-10-2018 Vc3S01_2829 ed51cd802064d3aa2da3b8f741c4e2cd 586 Gene3D G3DSA:3.40.1360.10 248 374 2.3E-42 T 12-10-2018 Vc3S01_2829 ed51cd802064d3aa2da3b8f741c4e2cd 586 SMART SM00766 456 581 1.1E-57 T 12-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 Vc3S01_A0657 297b98ad56ac46ba20a0a4ce650d3ad9 329 SUPERFAMILY SSF55347 127 289 5.56E-23 T 12-10-2018 Vc3S01_A0657 297b98ad56ac46ba20a0a4ce650d3ad9 329 Gene3D G3DSA:3.30.360.10 135 325 4.5E-52 T 12-10-2018 Vc3S01_A0657 297b98ad56ac46ba20a0a4ce650d3ad9 329 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 118 3.5E-25 T 12-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Vc3S01_A0657 297b98ad56ac46ba20a0a4ce650d3ad9 329 Gene3D G3DSA:3.40.50.720 1 134 3.8E-37 T 12-10-2018 Vc3S01_A0657 297b98ad56ac46ba20a0a4ce650d3ad9 329 SUPERFAMILY SSF51735 2 134 9.53E-45 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_2248 939caf2c02a7e8b4e7d54973c1d49cd4 256 SMART SM00382 31 229 1.2E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_2248 939caf2c02a7e8b4e7d54973c1d49cd4 256 SUPERFAMILY SSF52540 7 251 2.1E-74 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2248 939caf2c02a7e8b4e7d54973c1d49cd4 256 PIRSF PIRSF039085 3 256 7.3E-117 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 Vc3S01_2248 939caf2c02a7e8b4e7d54973c1d49cd4 256 Pfam PF00005 ABC transporter 22 181 1.0E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_2248 939caf2c02a7e8b4e7d54973c1d49cd4 256 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_2248 939caf2c02a7e8b4e7d54973c1d49cd4 256 Gene3D G3DSA:3.40.50.300 4 255 5.4E-74 T 12-10-2018 Vc3S01_0781 8578637d7f413980efb940429855365b 281 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 12-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Vc3S01_0781 8578637d7f413980efb940429855365b 281 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 12-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Vc3S01_0781 8578637d7f413980efb940429855365b 281 Gene3D G3DSA:1.10.286.20 180 226 1.5E-39 T 12-10-2018 Vc3S01_0781 8578637d7f413980efb940429855365b 281 SUPERFAMILY SSF46934 4 54 1.63E-17 T 12-10-2018 IPR009060 UBA-like superfamily GO:0005515 Vc3S01_0781 8578637d7f413980efb940429855365b 281 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 280 5.4E-103 T 12-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Vc3S01_0781 8578637d7f413980efb940429855365b 281 Gene3D G3DSA:3.30.479.20 145 260 1.5E-39 T 12-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 Vc3S01_0781 8578637d7f413980efb940429855365b 281 Gene3D G3DSA:1.10.8.10 1 56 2.0E-25 T 12-10-2018 Vc3S01_0781 8578637d7f413980efb940429855365b 281 Hamap MF_00050 Elongation factor Ts [tsf]. 1 280 75.035 T 12-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Vc3S01_0781 8578637d7f413980efb940429855365b 281 SUPERFAMILY SSF54713 56 138 6.38E-18 T 12-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 Vc3S01_0781 8578637d7f413980efb940429855365b 281 SUPERFAMILY SSF54713 142 279 4.97E-45 T 12-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 Vc3S01_0781 8578637d7f413980efb940429855365b 281 Gene3D G3DSA:3.30.479.20 57 140 2.5E-25 T 12-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 Vc3S01_0781 8578637d7f413980efb940429855365b 281 Pfam PF00889 Elongation factor TS 71 261 1.8E-60 T 12-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 Vc3S01_3216 685352921af3b2c8b00a674bb848c4cf 631 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 3.3E-294 T 12-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 Vc3S01_3216 685352921af3b2c8b00a674bb848c4cf 631 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 12-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 Vc3S01_3216 685352921af3b2c8b00a674bb848c4cf 631 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 12-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 Vc3S01_3216 685352921af3b2c8b00a674bb848c4cf 631 SMART SM01228 546 617 2.3E-42 T 12-10-2018 Vc3S01_3216 685352921af3b2c8b00a674bb848c4cf 631 Pfam PF01134 Glucose inhibited division protein A 8 399 3.2E-170 T 12-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 Vc3S01_3216 685352921af3b2c8b00a674bb848c4cf 631 Pfam PF13932 GidA associated domain 403 616 3.3E-76 T 12-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 Vc3S01_3216 685352921af3b2c8b00a674bb848c4cf 631 Gene3D G3DSA:1.10.150.570 569 622 6.7E-23 T 12-10-2018 Vc3S01_3216 685352921af3b2c8b00a674bb848c4cf 631 SUPERFAMILY SSF51905 6 261 4.33E-52 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_3216 685352921af3b2c8b00a674bb848c4cf 631 Gene3D G3DSA:1.10.10.1800 459 550 6.3E-32 T 12-10-2018 Vc3S01_3216 685352921af3b2c8b00a674bb848c4cf 631 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 42.691 T 12-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 Vc3S01_3216 685352921af3b2c8b00a674bb848c4cf 631 Gene3D G3DSA:3.50.50.60 1 232 1.0E-90 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_3216 685352921af3b2c8b00a674bb848c4cf 631 Gene3D G3DSA:3.50.50.60 296 458 4.7E-56 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_p20131 08322e4f76a647cbce9b55fe7f8986bf 545 Pfam PF00263 Bacterial type II and III secretion system protein 419 542 4.0E-7 T 12-10-2018 IPR004846 Type II/III secretion system GO:0009306 Vc3S01_p20131 08322e4f76a647cbce9b55fe7f8986bf 545 ProDom PD128112 MEMBRANE OUTER PILUS LIPOPROTEIN BIOSYNTHESIS C TOXIN-COREGULATED TOXIN COFD TCPC 374 538 7.0E-4 T 12-10-2018 Vc3S01_2908 1139f7067bb5d36f6eca505efabc1eec 653 SUPERFAMILY SSF56300 23 360 8.59E-89 T 12-10-2018 Vc3S01_2908 1139f7067bb5d36f6eca505efabc1eec 653 SUPERFAMILY SSF55816 361 603 3.79E-36 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Vc3S01_2908 1139f7067bb5d36f6eca505efabc1eec 653 Gene3D G3DSA:3.60.21.10 22 360 6.2E-139 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like Vc3S01_2908 1139f7067bb5d36f6eca505efabc1eec 653 TIGRFAM TIGR01390 CycNucDiestase: 2',3'-cyclic-nucleotide 2'-phosphodiesterase 29 653 0.0 T 12-10-2018 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase GO:0008663|GO:0009117 KEGG: 00230+3.1.4.16+3.1.3.6|KEGG: 00240+3.1.4.16+3.1.3.6 Vc3S01_2908 1139f7067bb5d36f6eca505efabc1eec 653 PRINTS PR01607 Apyrase family signature 289 309 2.9E-29 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Vc3S01_2908 1139f7067bb5d36f6eca505efabc1eec 653 PRINTS PR01607 Apyrase family signature 28 46 2.9E-29 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Vc3S01_2908 1139f7067bb5d36f6eca505efabc1eec 653 PRINTS PR01607 Apyrase family signature 434 457 2.9E-29 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Vc3S01_2908 1139f7067bb5d36f6eca505efabc1eec 653 PRINTS PR01607 Apyrase family signature 221 238 2.9E-29 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Vc3S01_2908 1139f7067bb5d36f6eca505efabc1eec 653 PRINTS PR01607 Apyrase family signature 536 555 2.9E-29 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Vc3S01_2908 1139f7067bb5d36f6eca505efabc1eec 653 PRINTS PR01607 Apyrase family signature 249 272 2.9E-29 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Vc3S01_2908 1139f7067bb5d36f6eca505efabc1eec 653 Gene3D G3DSA:3.90.780.10 417 592 3.4E-49 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Vc3S01_2908 1139f7067bb5d36f6eca505efabc1eec 653 ProSitePatterns PS00786 5'-nucleotidase signature 2. 115 126 - T 12-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Vc3S01_2908 1139f7067bb5d36f6eca505efabc1eec 653 Pfam PF02872 5'-nucleotidase, C-terminal domain 362 553 2.0E-20 T 12-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Vc3S01_2908 1139f7067bb5d36f6eca505efabc1eec 653 Pfam PF00149 Calcineurin-like phosphoesterase 30 265 7.6E-11 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Vc3S01_2282 863cd3fd9a3b8d2afa25fd5afea3dcea 768 Gene3D G3DSA:3.40.50.1000 444 709 1.1E-82 T 12-10-2018 IPR023214 HAD superfamily Vc3S01_2282 863cd3fd9a3b8d2afa25fd5afea3dcea 768 Gene3D G3DSA:3.30.70.100 70 140 1.7E-13 T 12-10-2018 Vc3S01_2282 863cd3fd9a3b8d2afa25fd5afea3dcea 768 SUPERFAMILY SSF56784 462 757 1.26E-51 T 12-10-2018 IPR036412 HAD-like superfamily Vc3S01_2282 863cd3fd9a3b8d2afa25fd5afea3dcea 768 SUPERFAMILY SSF81653 265 362 4.05E-21 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Vc3S01_2282 863cd3fd9a3b8d2afa25fd5afea3dcea 768 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 465 471 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Vc3S01_2282 863cd3fd9a3b8d2afa25fd5afea3dcea 768 ProSitePatterns PS01047 Heavy-metal-associated domain. 77 106 - T 12-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 Vc3S01_2282 863cd3fd9a3b8d2afa25fd5afea3dcea 768 Pfam PF00122 E1-E2 ATPase 263 443 1.1E-50 T 12-10-2018 Vc3S01_2282 863cd3fd9a3b8d2afa25fd5afea3dcea 768 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 212 759 5.0E-175 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Vc3S01_2282 863cd3fd9a3b8d2afa25fd5afea3dcea 768 Gene3D G3DSA:3.40.1110.10 474 591 1.1E-82 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Vc3S01_2282 863cd3fd9a3b8d2afa25fd5afea3dcea 768 PRINTS PR00941 Cadmium-transporting ATPase signature 86 107 6.2E-8 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Vc3S01_2282 863cd3fd9a3b8d2afa25fd5afea3dcea 768 PRINTS PR00941 Cadmium-transporting ATPase signature 347 361 6.2E-8 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Vc3S01_2282 863cd3fd9a3b8d2afa25fd5afea3dcea 768 PRINTS PR00941 Cadmium-transporting ATPase signature 247 267 6.2E-8 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Vc3S01_2282 863cd3fd9a3b8d2afa25fd5afea3dcea 768 Pfam PF00702 haloacid dehalogenase-like hydrolase 461 669 6.2E-38 T 12-10-2018 Vc3S01_2282 863cd3fd9a3b8d2afa25fd5afea3dcea 768 Pfam PF00403 Heavy-metal-associated domain 77 133 1.2E-11 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Vc3S01_2282 863cd3fd9a3b8d2afa25fd5afea3dcea 768 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 212 523 6.8E-96 T 12-10-2018 Vc3S01_2282 863cd3fd9a3b8d2afa25fd5afea3dcea 768 SUPERFAMILY SSF55008 72 136 1.01E-13 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Vc3S01_2282 863cd3fd9a3b8d2afa25fd5afea3dcea 768 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 235 736 1.2E-82 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Vc3S01_2282 863cd3fd9a3b8d2afa25fd5afea3dcea 768 SUPERFAMILY SSF81665 215 745 1.11E-20 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Vc3S01_2282 863cd3fd9a3b8d2afa25fd5afea3dcea 768 Gene3D G3DSA:2.70.150.20 262 367 1.1E-31 T 12-10-2018 Vc3S01_2282 863cd3fd9a3b8d2afa25fd5afea3dcea 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 606 616 1.1E-27 T 12-10-2018 Vc3S01_2282 863cd3fd9a3b8d2afa25fd5afea3dcea 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 463 477 1.1E-27 T 12-10-2018 Vc3S01_2282 863cd3fd9a3b8d2afa25fd5afea3dcea 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 584 595 1.1E-27 T 12-10-2018 Vc3S01_2282 863cd3fd9a3b8d2afa25fd5afea3dcea 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 312 326 1.1E-27 T 12-10-2018 Vc3S01_2282 863cd3fd9a3b8d2afa25fd5afea3dcea 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 657 676 1.1E-27 T 12-10-2018 Vc3S01_2282 863cd3fd9a3b8d2afa25fd5afea3dcea 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 680 692 1.1E-27 T 12-10-2018 Vc3S01_1954 d3cbc412e611e2345f3ad0a9cd047a6f 511 Pfam PF06826 Predicted Permease Membrane Region 340 508 6.9E-43 T 12-10-2018 IPR006512 YidE/YbjL duplication Vc3S01_1954 d3cbc412e611e2345f3ad0a9cd047a6f 511 Pfam PF06826 Predicted Permease Membrane Region 5 136 5.0E-26 T 12-10-2018 IPR006512 YidE/YbjL duplication Vc3S01_1954 d3cbc412e611e2345f3ad0a9cd047a6f 511 Pfam PF02080 TrkA-C domain 260 325 1.3E-9 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Vc3S01_1954 d3cbc412e611e2345f3ad0a9cd047a6f 511 Pfam PF02080 TrkA-C domain 183 232 2.0E-8 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Vc3S01_1954 d3cbc412e611e2345f3ad0a9cd047a6f 511 SUPERFAMILY SSF116726 182 236 2.49E-10 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Vc3S01_1954 d3cbc412e611e2345f3ad0a9cd047a6f 511 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 6 122 6.2E-21 T 12-10-2018 IPR006512 YidE/YbjL duplication Vc3S01_1954 d3cbc412e611e2345f3ad0a9cd047a6f 511 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 344 495 5.0E-38 T 12-10-2018 IPR006512 YidE/YbjL duplication Vc3S01_1954 d3cbc412e611e2345f3ad0a9cd047a6f 511 SUPERFAMILY SSF116726 245 328 4.71E-10 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Vc3S01_1954 d3cbc412e611e2345f3ad0a9cd047a6f 511 Gene3D G3DSA:3.30.70.1450 180 239 1.6E-9 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Vc3S01_1875 3f7fc59c44e4b603f23214826980d521 327 SUPERFAMILY SSF55681 92 327 1.43E-82 T 12-10-2018 Vc3S01_1875 3f7fc59c44e4b603f23214826980d521 327 SUPERFAMILY SSF46589 14 99 8.37E-22 T 12-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 Vc3S01_1875 3f7fc59c44e4b603f23214826980d521 327 Pfam PF01409 tRNA synthetases class II core domain (F) 92 326 1.3E-106 T 12-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 Vc3S01_1875 3f7fc59c44e4b603f23214826980d521 327 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 3.0E-24 T 12-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 Vc3S01_1875 3f7fc59c44e4b603f23214826980d521 327 Gene3D G3DSA:3.30.930.10 7 327 3.9E-126 T 12-10-2018 Vc3S01_1875 3f7fc59c44e4b603f23214826980d521 327 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 326 49.049 T 12-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 Vc3S01_1875 3f7fc59c44e4b603f23214826980d521 327 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 327 3.7E-111 T 12-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 Vc3S01_1177 b4d6badc6ffceeae93a34e66a32af821 222 Pfam PF13309 HTH domain 160 217 2.7E-12 T 12-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain Vc3S01_1177 b4d6badc6ffceeae93a34e66a32af821 222 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 13 135 5.0E-63 T 12-10-2018 IPR013559 YheO-like Vc3S01_1177 b4d6badc6ffceeae93a34e66a32af821 222 Pfam PF08348 YheO-like PAS domain 17 123 1.0E-34 T 12-10-2018 IPR013559 YheO-like Vc3S01_2360 e33920ccdce7a2cf07527b6a4bfd6886 299 Gene3D G3DSA:3.40.50.620 1 192 5.7E-27 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Vc3S01_2360 e33920ccdce7a2cf07527b6a4bfd6886 299 SUPERFAMILY SSF52402 8 180 8.38E-18 T 12-10-2018 Vc3S01_2360 e33920ccdce7a2cf07527b6a4bfd6886 299 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 9 126 7.2E-9 T 12-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 Vc3S01_p40074 fd8f94bf64bf9cbeb2338174852080ab 116 SUPERFAMILY SSF50118 1 109 1.13E-30 T 12-10-2018 Vc3S01_p40074 fd8f94bf64bf9cbeb2338174852080ab 116 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 8 106 1.7E-19 T 12-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 Vc3S01_p40074 fd8f94bf64bf9cbeb2338174852080ab 116 Gene3D G3DSA:2.30.30.110 1 115 3.3E-33 T 12-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor Vc3S01_2531 cbda74d1abc784d103600fcb46eceae2 416 PIRSF PIRSF000412 1 416 7.2E-170 T 12-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Vc3S01_2531 cbda74d1abc784d103600fcb46eceae2 416 SUPERFAMILY SSF53383 6 415 2.89E-185 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Vc3S01_2531 cbda74d1abc784d103600fcb46eceae2 416 Gene3D G3DSA:3.90.1150.10 10 396 2.7E-187 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Vc3S01_2531 cbda74d1abc784d103600fcb46eceae2 416 Gene3D G3DSA:3.40.640.10 37 288 2.7E-187 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Vc3S01_2531 cbda74d1abc784d103600fcb46eceae2 416 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 12-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Vc3S01_2531 cbda74d1abc784d103600fcb46eceae2 416 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 416 52.642 T 12-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Vc3S01_2531 cbda74d1abc784d103600fcb46eceae2 416 Pfam PF00464 Serine hydroxymethyltransferase 8 385 8.1E-184 T 12-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Vc3S01_0161 df7d9049bfa0b98062c4f667cecd1a45 1342 Gene3D G3DSA:2.40.270.10 790 833 1.1E-6 T 12-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Vc3S01_0161 df7d9049bfa0b98062c4f667cecd1a45 1342 Gene3D G3DSA:2.40.50.100 714 788 3.4E-32 T 12-10-2018 Vc3S01_0161 df7d9049bfa0b98062c4f667cecd1a45 1342 Gene3D G3DSA:2.40.50.150 834 954 2.6E-44 T 12-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Vc3S01_0161 df7d9049bfa0b98062c4f667cecd1a45 1342 Pfam PF04565 RNA polymerase Rpb2, domain 3 513 580 7.3E-29 T 12-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Vc3S01_0161 df7d9049bfa0b98062c4f667cecd1a45 1342 Gene3D G3DSA:3.90.1100.10 19 156 3.4E-48 T 12-10-2018 Vc3S01_0161 df7d9049bfa0b98062c4f667cecd1a45 1342 Pfam PF04560 RNA polymerase Rpb2, domain 7 1265 1339 3.0E-27 T 12-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Vc3S01_0161 df7d9049bfa0b98062c4f667cecd1a45 1342 SUPERFAMILY SSF64484 11 1341 0.0 T 12-10-2018 Vc3S01_0161 df7d9049bfa0b98062c4f667cecd1a45 1342 Gene3D G3DSA:3.90.1110.10 157 262 1.9E-27 T 12-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Vc3S01_0161 df7d9049bfa0b98062c4f667cecd1a45 1342 Pfam PF10385 RNA polymerase beta subunit external 1 domain 591 656 2.2E-21 T 12-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Vc3S01_0161 df7d9049bfa0b98062c4f667cecd1a45 1342 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1341 12.274 T 12-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Vc3S01_0161 df7d9049bfa0b98062c4f667cecd1a45 1342 Gene3D G3DSA:3.90.1110.10 300 441 7.8E-35 T 12-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Vc3S01_0161 df7d9049bfa0b98062c4f667cecd1a45 1342 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1338 0.0 T 12-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Vc3S01_0161 df7d9049bfa0b98062c4f667cecd1a45 1342 Gene3D G3DSA:3.90.1800.10 1251 1305 8.1E-11 T 12-10-2018 Vc3S01_0161 df7d9049bfa0b98062c4f667cecd1a45 1342 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1063 1075 - T 12-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Vc3S01_0161 df7d9049bfa0b98062c4f667cecd1a45 1342 Pfam PF04563 RNA polymerase beta subunit 26 500 2.0E-57 T 12-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Vc3S01_0161 df7d9049bfa0b98062c4f667cecd1a45 1342 Pfam PF00562 RNA polymerase Rpb2, domain 6 717 1263 6.4E-157 T 12-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Vc3S01_0161 df7d9049bfa0b98062c4f667cecd1a45 1342 Gene3D G3DSA:3.90.1100.10 646 713 1.8E-21 T 12-10-2018 Vc3S01_0161 df7d9049bfa0b98062c4f667cecd1a45 1342 Gene3D G3DSA:3.90.1100.10 442 611 2.7E-65 T 12-10-2018 Vc3S01_0161 df7d9049bfa0b98062c4f667cecd1a45 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 151 223 1.6E-7 T 12-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Vc3S01_0161 df7d9049bfa0b98062c4f667cecd1a45 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 337 454 6.7E-17 T 12-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Vc3S01_0161 df7d9049bfa0b98062c4f667cecd1a45 1342 Gene3D G3DSA:2.40.270.10 1035 1241 8.7E-88 T 12-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Vc3S01_2851 15e2395d5437a116329f6918c70ab083 602 Gene3D G3DSA:3.40.50.12780 317 457 3.3E-34 T 12-10-2018 Vc3S01_2851 15e2395d5437a116329f6918c70ab083 602 Gene3D G3DSA:3.40.50.12780 3 314 3.0E-52 T 12-10-2018 Vc3S01_2851 15e2395d5437a116329f6918c70ab083 602 SUPERFAMILY SSF56801 7 596 1.7E-115 T 12-10-2018 Vc3S01_2851 15e2395d5437a116329f6918c70ab083 602 Pfam PF00501 AMP-binding enzyme 13 466 7.0E-101 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Vc3S01_2851 15e2395d5437a116329f6918c70ab083 602 ProSitePatterns PS00455 Putative AMP-binding domain signature. 183 194 - T 12-10-2018 IPR020845 AMP-binding, conserved site Vc3S01_2150 898a254785edd12e38ebc0bc25394b0e 240 Pfam PF01311 Bacterial export proteins, family 1 1 227 3.2E-54 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Vc3S01_2150 898a254785edd12e38ebc0bc25394b0e 240 TIGRFAM TIGR01401 fliR_like_III: type III secretion apparatus protein SpaR/YscT/HrcT 1 224 5.6E-75 T 12-10-2018 IPR006304 Type III secretion protein SpaR/YscT GO:0016021 Vc3S01_2150 898a254785edd12e38ebc0bc25394b0e 240 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 60 79 2.2E-24 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Vc3S01_2150 898a254785edd12e38ebc0bc25394b0e 240 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 184 203 2.2E-24 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Vc3S01_2150 898a254785edd12e38ebc0bc25394b0e 240 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 162 184 2.2E-24 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Vc3S01_A0125 3fa3f0a84468f0e7dad3a8f7bac1563e 382 Gene3D G3DSA:3.40.50.720 185 323 1.2E-152 T 12-10-2018 Vc3S01_A0125 3fa3f0a84468f0e7dad3a8f7bac1563e 382 Gene3D G3DSA:3.90.180.10 17 375 1.2E-152 T 12-10-2018 Vc3S01_A0125 3fa3f0a84468f0e7dad3a8f7bac1563e 382 SUPERFAMILY SSF50129 10 196 5.75E-72 T 12-10-2018 IPR011032 GroES-like superfamily Vc3S01_A0125 3fa3f0a84468f0e7dad3a8f7bac1563e 382 Pfam PF00107 Zinc-binding dehydrogenase 208 337 7.6E-27 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Vc3S01_A0125 3fa3f0a84468f0e7dad3a8f7bac1563e 382 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 13 380 4.9E-228 T 12-10-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 Vc3S01_A0125 3fa3f0a84468f0e7dad3a8f7bac1563e 382 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 39 165 1.0E-25 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Vc3S01_A0125 3fa3f0a84468f0e7dad3a8f7bac1563e 382 SUPERFAMILY SSF50129 329 379 5.65E-11 T 12-10-2018 IPR011032 GroES-like superfamily Vc3S01_A0125 3fa3f0a84468f0e7dad3a8f7bac1563e 382 SUPERFAMILY SSF51735 171 345 1.87E-50 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_A0125 3fa3f0a84468f0e7dad3a8f7bac1563e 382 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 72 86 - T 12-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 Vc3S01_A0125 3fa3f0a84468f0e7dad3a8f7bac1563e 382 SMART SM00829 23 378 0.0012 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Vc3S01_2513 5587b1f0f52befcf241667349d7b8813 474 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 12-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 Vc3S01_2513 5587b1f0f52befcf241667349d7b8813 474 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 437 8.1E-153 T 12-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 Vc3S01_2513 5587b1f0f52befcf241667349d7b8813 474 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 6.6E-30 T 12-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 Vc3S01_2513 5587b1f0f52befcf241667349d7b8813 474 SMART SM00729 147 367 3.3E-63 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Vc3S01_2513 5587b1f0f52befcf241667349d7b8813 474 SUPERFAMILY SSF102114 123 371 5.36E-61 T 12-10-2018 Vc3S01_2513 5587b1f0f52befcf241667349d7b8813 474 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 440 2.7E-199 T 12-10-2018 Vc3S01_2513 5587b1f0f52befcf241667349d7b8813 474 Gene3D G3DSA:3.40.50.12160 3 138 1.6E-34 T 12-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily Vc3S01_2513 5587b1f0f52befcf241667349d7b8813 474 Pfam PF04055 Radical SAM superfamily 151 325 2.9E-27 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Vc3S01_2513 5587b1f0f52befcf241667349d7b8813 474 Gene3D G3DSA:3.80.30.20 145 379 1.1E-82 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Vc3S01_2513 5587b1f0f52befcf241667349d7b8813 474 Pfam PF01938 TRAM domain 381 440 8.0E-17 T 12-10-2018 IPR002792 TRAM domain Vc3S01_2513 5587b1f0f52befcf241667349d7b8813 474 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 440 72.597 T 12-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 Vc3S01_A0961 9d93f09b43336733ea209249d1c0b162 473 Pfam PF01979 Amidohydrolase family 90 287 1.5E-9 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Vc3S01_A0961 9d93f09b43336733ea209249d1c0b162 473 SUPERFAMILY SSF51338 34 438 3.2E-17 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Vc3S01_A0961 9d93f09b43336733ea209249d1c0b162 473 Gene3D G3DSA:2.30.40.10 45 438 1.1E-90 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Vc3S01_A0961 9d93f09b43336733ea209249d1c0b162 473 SUPERFAMILY SSF51556 94 396 3.26E-46 T 12-10-2018 IPR032466 Metal-dependent hydrolase Vc3S01_A0961 9d93f09b43336733ea209249d1c0b162 473 Gene3D G3DSA:3.20.20.140 95 410 1.1E-90 T 12-10-2018 Vc3S01_2581 e1acf4f69cd07bba77b9727497b38d42 102 Pfam PF12286 Protein of unknown function (DUF3622) 1 71 4.3E-34 T 12-10-2018 IPR022069 Protein of unknown function DUF3622 Vc3S01_2425 c30befdaa5ee5affe89031a5d88c5f7e 171 Pfam PF17323 Trans-membrane regulatory protein ToxS 21 169 2.2E-69 T 12-10-2018 IPR035288 Trans-membrane regulatory protein ToxS GO:0016021 Vc3S01_2425 c30befdaa5ee5affe89031a5d88c5f7e 171 ProDom PD016359 TRANSMEMBRANE TOXS REGULATORY MEMBRANE PERIPLASMIC 1 171 4.0E-91 T 12-10-2018 IPR035288 Trans-membrane regulatory protein ToxS GO:0016021 Vc3S01_A0643 a49076ebc78d4b960f3b93056a6b7e1d 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 227 6.7E-16 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Vc3S01_A0643 a49076ebc78d4b960f3b93056a6b7e1d 230 Gene3D G3DSA:3.40.50.2300 1 119 3.7E-32 T 12-10-2018 Vc3S01_A0643 a49076ebc78d4b960f3b93056a6b7e1d 230 SUPERFAMILY SSF46894 140 228 5.39E-19 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Vc3S01_A0643 a49076ebc78d4b960f3b93056a6b7e1d 230 SMART SM00862 151 227 6.4E-15 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Vc3S01_A0643 a49076ebc78d4b960f3b93056a6b7e1d 230 Pfam PF00072 Response regulator receiver domain 6 114 1.5E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A0643 a49076ebc78d4b960f3b93056a6b7e1d 230 SMART SM00448 4 114 2.4E-35 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A0643 a49076ebc78d4b960f3b93056a6b7e1d 230 Gene3D G3DSA:1.10.10.10 120 230 8.4E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A0643 a49076ebc78d4b960f3b93056a6b7e1d 230 SUPERFAMILY SSF52172 4 129 7.12E-37 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_1758 73670deb4741dcb97447a74d28ee4035 708 Pfam PF05378 Hydantoinase/oxoprolinase N-terminal region 5 171 1.1E-25 T 12-10-2018 IPR008040 Hydantoinaseoxoprolinase, N-terminal Reactome: R-HSA-174403|Reactome: R-HSA-5578998 Vc3S01_1758 73670deb4741dcb97447a74d28ee4035 708 Gene3D G3DSA:3.30.420.40 2 78 4.6E-9 T 12-10-2018 Vc3S01_1758 73670deb4741dcb97447a74d28ee4035 708 Pfam PF01968 Hydantoinase/oxoprolinase 190 496 8.3E-67 T 12-10-2018 IPR002821 Hydantoinase A/oxoprolinase GO:0016787 Reactome: R-HSA-174403|Reactome: R-HSA-5578998 Vc3S01_1758 73670deb4741dcb97447a74d28ee4035 708 SUPERFAMILY SSF53067 5 490 5.26E-14 T 12-10-2018 Vc3S01_0278 90ddcc8a505ac032a258ee1d03795f7c 639 SMART SM00382 26 223 1.1E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_0278 90ddcc8a505ac032a258ee1d03795f7c 639 SMART SM00382 337 503 1.1E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_0278 90ddcc8a505ac032a258ee1d03795f7c 639 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_0278 90ddcc8a505ac032a258ee1d03795f7c 639 Pfam PF12848 ABC transporter 217 295 2.6E-27 T 12-10-2018 IPR032781 ABC-transporter extension domain Vc3S01_0278 90ddcc8a505ac032a258ee1d03795f7c 639 SUPERFAMILY SSF52540 276 494 1.59E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0278 90ddcc8a505ac032a258ee1d03795f7c 639 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_0278 90ddcc8a505ac032a258ee1d03795f7c 639 Gene3D G3DSA:3.40.50.300 7 273 2.4E-58 T 12-10-2018 Vc3S01_0278 90ddcc8a505ac032a258ee1d03795f7c 639 Gene3D G3DSA:3.40.50.300 276 540 9.9E-55 T 12-10-2018 Vc3S01_0278 90ddcc8a505ac032a258ee1d03795f7c 639 SUPERFAMILY SSF52540 2 258 1.89E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0278 90ddcc8a505ac032a258ee1d03795f7c 639 Pfam PF00005 ABC transporter 328 459 3.4E-25 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_0278 90ddcc8a505ac032a258ee1d03795f7c 639 Pfam PF00005 ABC transporter 17 178 4.3E-21 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_0928 bc1442ff6a8e4c69756dc5fc0751f6b8 232 Pfam PF00230 Major intrinsic protein 2 222 7.1E-50 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Vc3S01_0928 bc1442ff6a8e4c69756dc5fc0751f6b8 232 SUPERFAMILY SSF81338 2 228 3.53E-69 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 Vc3S01_0928 bc1442ff6a8e4c69756dc5fc0751f6b8 232 TIGRFAM TIGR00861 MIP: MIP family channel proteins 6 222 5.5E-62 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Vc3S01_0928 bc1442ff6a8e4c69756dc5fc0751f6b8 232 ProSitePatterns PS00221 MIP family signature. 60 68 - T 12-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 Vc3S01_0928 bc1442ff6a8e4c69756dc5fc0751f6b8 232 Hamap MF_01146 Aquaporin Z [aqpZ]. 1 229 35.183 T 12-10-2018 IPR023743 Aquaporin Z GO:0006833|GO:0015250|GO:0016021|GO:0055085 Vc3S01_0928 bc1442ff6a8e4c69756dc5fc0751f6b8 232 Gene3D G3DSA:1.20.1080.10 1 229 4.7E-86 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 Vc3S01_0928 bc1442ff6a8e4c69756dc5fc0751f6b8 232 PRINTS PR00783 Major intrinsic protein family signature 42 66 8.7E-52 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Vc3S01_0928 bc1442ff6a8e4c69756dc5fc0751f6b8 232 PRINTS PR00783 Major intrinsic protein family signature 205 225 8.7E-52 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Vc3S01_0928 bc1442ff6a8e4c69756dc5fc0751f6b8 232 PRINTS PR00783 Major intrinsic protein family signature 2 21 8.7E-52 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Vc3S01_0928 bc1442ff6a8e4c69756dc5fc0751f6b8 232 PRINTS PR00783 Major intrinsic protein family signature 79 98 8.7E-52 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Vc3S01_0928 bc1442ff6a8e4c69756dc5fc0751f6b8 232 PRINTS PR00783 Major intrinsic protein family signature 136 154 8.7E-52 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Vc3S01_0928 bc1442ff6a8e4c69756dc5fc0751f6b8 232 PRINTS PR00783 Major intrinsic protein family signature 166 188 8.7E-52 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Vc3S01_A0360 c0decd684b68028f5c225e1f26fabb1a 696 PIRSF PIRSF005419 2 696 4.9E-223 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Vc3S01_A0360 c0decd684b68028f5c225e1f26fabb1a 696 Gene3D G3DSA:1.10.8.540 502 589 5.8E-13 T 12-10-2018 Vc3S01_A0360 c0decd684b68028f5c225e1f26fabb1a 696 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 141 164 - T 12-10-2018 IPR025505 FHIPEP conserved site Vc3S01_A0360 c0decd684b68028f5c225e1f26fabb1a 696 Gene3D G3DSA:3.40.30.60 358 501 9.3E-45 T 12-10-2018 Vc3S01_A0360 c0decd684b68028f5c225e1f26fabb1a 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 155 173 6.2E-55 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Vc3S01_A0360 c0decd684b68028f5c225e1f26fabb1a 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 236 250 6.2E-55 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Vc3S01_A0360 c0decd684b68028f5c225e1f26fabb1a 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 136 152 6.2E-55 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Vc3S01_A0360 c0decd684b68028f5c225e1f26fabb1a 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 32 45 6.2E-55 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Vc3S01_A0360 c0decd684b68028f5c225e1f26fabb1a 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 185 202 6.2E-55 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Vc3S01_A0360 c0decd684b68028f5c225e1f26fabb1a 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 69 88 6.2E-55 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Vc3S01_A0360 c0decd684b68028f5c225e1f26fabb1a 696 Gene3D G3DSA:1.10.490.80 592 695 4.8E-10 T 12-10-2018 Vc3S01_A0360 c0decd684b68028f5c225e1f26fabb1a 696 Pfam PF00771 FHIPEP family 25 687 1.1E-242 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Vc3S01_A0360 c0decd684b68028f5c225e1f26fabb1a 696 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 16 694 1.1E-236 T 12-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 Vc3S01_2895 afc4a9efd4c1460605b4af1ff47c0f55 76 Pfam PF06526 Protein of unknown function (DUF1107) 12 74 2.9E-25 T 12-10-2018 IPR009491 Protein of unknown function DUF1107 Vc3S01_2895 afc4a9efd4c1460605b4af1ff47c0f55 76 Gene3D G3DSA:3.30.1910.10 12 74 1.4E-18 T 12-10-2018 Vc3S01_2895 afc4a9efd4c1460605b4af1ff47c0f55 76 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 11 74 2.0E-23 T 12-10-2018 IPR009491 Protein of unknown function DUF1107 Vc3S01_1496 314f3fee95823c6426cb90a7ff6d207a 626 Pfam PF00027 Cyclic nucleotide-binding domain 37 118 1.6E-12 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain Vc3S01_1496 314f3fee95823c6426cb90a7ff6d207a 626 SUPERFAMILY SSF51206 7 133 2.09E-27 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like Vc3S01_1496 314f3fee95823c6426cb90a7ff6d207a 626 Gene3D G3DSA:2.60.120.10 2 135 4.9E-23 T 12-10-2018 IPR014710 RmlC-like jelly roll fold Vc3S01_1496 314f3fee95823c6426cb90a7ff6d207a 626 SMART SM00100 17 134 1.3E-12 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain Vc3S01_1496 314f3fee95823c6426cb90a7ff6d207a 626 Pfam PF00571 CBS domain 153 211 8.1E-9 T 12-10-2018 IPR000644 CBS domain Vc3S01_1496 314f3fee95823c6426cb90a7ff6d207a 626 Pfam PF00571 CBS domain 225 277 6.5E-12 T 12-10-2018 IPR000644 CBS domain Vc3S01_1496 314f3fee95823c6426cb90a7ff6d207a 626 SUPERFAMILY SSF54631 146 278 4.67E-30 T 12-10-2018 Vc3S01_1496 314f3fee95823c6426cb90a7ff6d207a 626 Gene3D G3DSA:3.10.580.10 144 281 8.3E-34 T 12-10-2018 Vc3S01_1496 314f3fee95823c6426cb90a7ff6d207a 626 Pfam PF03445 Putative nucleotidyltransferase DUF294 304 441 1.5E-47 T 12-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 Vc3S01_1496 314f3fee95823c6426cb90a7ff6d207a 626 SMART SM00116 159 215 0.0022 T 12-10-2018 IPR000644 CBS domain Vc3S01_1496 314f3fee95823c6426cb90a7ff6d207a 626 SMART SM00116 232 279 2.2E-5 T 12-10-2018 IPR000644 CBS domain Vc3S01_1496 314f3fee95823c6426cb90a7ff6d207a 626 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 478 621 1.5E-43 T 12-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding Vc3S01_2864 bb5de6f65d800c1d76bc45955788f2bd 427 Gene3D G3DSA:1.10.4030.30 25 271 1.4E-69 T 12-10-2018 Vc3S01_2864 bb5de6f65d800c1d76bc45955788f2bd 427 Pfam PF09312 SurA N-terminal domain 24 141 1.5E-43 T 12-10-2018 IPR015391 SurA N-terminal Vc3S01_2864 bb5de6f65d800c1d76bc45955788f2bd 427 Pfam PF13616 PPIC-type PPIASE domain 276 378 2.7E-22 T 12-10-2018 Vc3S01_2864 bb5de6f65d800c1d76bc45955788f2bd 427 Pfam PF13616 PPIC-type PPIASE domain 163 269 1.5E-21 T 12-10-2018 Vc3S01_2864 bb5de6f65d800c1d76bc45955788f2bd 427 Gene3D G3DSA:3.10.50.40 275 415 2.6E-38 T 12-10-2018 Vc3S01_2864 bb5de6f65d800c1d76bc45955788f2bd 427 Gene3D G3DSA:3.10.50.40 171 270 1.4E-69 T 12-10-2018 Vc3S01_2864 bb5de6f65d800c1d76bc45955788f2bd 427 SUPERFAMILY SSF54534 172 270 7.85E-25 T 12-10-2018 Vc3S01_2864 bb5de6f65d800c1d76bc45955788f2bd 427 SUPERFAMILY SSF54534 278 380 9.16E-29 T 12-10-2018 Vc3S01_2864 bb5de6f65d800c1d76bc45955788f2bd 427 Hamap MF_01183 Chaperone SurA [surA]. 8 423 31.829 T 12-10-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0043165|GO:0050821|GO:0051082|GO:0060274 Vc3S01_2864 bb5de6f65d800c1d76bc45955788f2bd 427 SUPERFAMILY SSF109998 24 195 2.62E-39 T 12-10-2018 IPR027304 Trigger factor/SurA domain superfamily Vc3S01_3215 bbbc74d1ccc87707e314192fabbdded7 211 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 29 207 1.4E-56 T 12-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 Vc3S01_3215 bbbc74d1ccc87707e314192fabbdded7 211 SUPERFAMILY SSF53335 8 209 1.4E-40 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Vc3S01_3215 bbbc74d1ccc87707e314192fabbdded7 211 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 16 205 28.669 T 12-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 Vc3S01_3215 bbbc74d1ccc87707e314192fabbdded7 211 PIRSF PIRSF003078 1 211 5.5E-60 T 12-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 Vc3S01_3215 bbbc74d1ccc87707e314192fabbdded7 211 Gene3D G3DSA:3.40.50.150 5 210 4.2E-68 T 12-10-2018 Vc3S01_3215 bbbc74d1ccc87707e314192fabbdded7 211 Pfam PF02527 rRNA small subunit methyltransferase G 23 204 2.7E-62 T 12-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 Vc3S01_2690 0e20c1dea791787524ad68d1736e516f 645 Gene3D G3DSA:1.10.1240.20 405 473 1.1E-19 T 12-10-2018 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily GO:0004553|GO:0042597 Vc3S01_2690 0e20c1dea791787524ad68d1736e516f 645 Pfam PF14718 Soluble lytic murein transglycosylase L domain 408 473 5.3E-22 T 12-10-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 Vc3S01_2690 0e20c1dea791787524ad68d1736e516f 645 SUPERFAMILY SSF53955 481 636 1.13E-45 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily Vc3S01_2690 0e20c1dea791787524ad68d1736e516f 645 SUPERFAMILY SSF48435 30 478 1.18E-128 T 12-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 Vc3S01_2690 0e20c1dea791787524ad68d1736e516f 645 Gene3D G3DSA:1.10.530.10 474 645 3.1E-48 T 12-10-2018 Vc3S01_2690 0e20c1dea791787524ad68d1736e516f 645 Pfam PF01464 Transglycosylase SLT domain 486 597 4.8E-29 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 Vc3S01_2690 0e20c1dea791787524ad68d1736e516f 645 Gene3D G3DSA:1.25.20.10 30 391 1.1E-101 T 12-10-2018 Vc3S01_2405 a36e3c42b609b33b149785f7063e28e1 548 SUPERFAMILY SSF53738 209 317 4.0E-8 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Vc3S01_2405 a36e3c42b609b33b149785f7063e28e1 548 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 1 543 0.0 T 12-10-2018 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6317|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-6981|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7900|MetaCyc: PWY-7902 Vc3S01_2405 a36e3c42b609b33b149785f7063e28e1 548 Gene3D G3DSA:3.40.120.10 12 218 1.8E-75 T 12-10-2018 Vc3S01_2405 a36e3c42b609b33b149785f7063e28e1 548 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 320 438 2.2E-28 T 12-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Vc3S01_2405 a36e3c42b609b33b149785f7063e28e1 548 SUPERFAMILY SSF53738 305 446 8.24E-31 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Vc3S01_2405 a36e3c42b609b33b149785f7063e28e1 548 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 490 537 1.8E-8 T 12-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Vc3S01_2405 a36e3c42b609b33b149785f7063e28e1 548 Gene3D G3DSA:3.40.120.10 221 318 5.6E-45 T 12-10-2018 Vc3S01_2405 a36e3c42b609b33b149785f7063e28e1 548 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 12-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Vc3S01_2405 a36e3c42b609b33b149785f7063e28e1 548 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 317 1.3E-17 T 12-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Vc3S01_2405 a36e3c42b609b33b149785f7063e28e1 548 Gene3D G3DSA:3.40.120.10 319 442 8.9E-35 T 12-10-2018 Vc3S01_2405 a36e3c42b609b33b149785f7063e28e1 548 Gene3D G3DSA:3.30.310.50 443 546 5.6E-35 T 12-10-2018 Vc3S01_2405 a36e3c42b609b33b149785f7063e28e1 548 SUPERFAMILY SSF53738 27 235 5.65E-52 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Vc3S01_2405 a36e3c42b609b33b149785f7063e28e1 548 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 40 179 4.5E-40 T 12-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Vc3S01_2405 a36e3c42b609b33b149785f7063e28e1 548 SUPERFAMILY SSF55957 433 543 5.41E-20 T 12-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Vc3S01_A0656 6f65a8453cc4d789d4060fdaac8d76cf 878 SMART SM00448 755 872 2.2E-35 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A0656 6f65a8453cc4d789d4060fdaac8d76cf 878 Gene3D G3DSA:1.10.287.130 344 441 6.3E-27 T 12-10-2018 Vc3S01_A0656 6f65a8453cc4d789d4060fdaac8d76cf 878 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 491 605 1.3E-27 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_A0656 6f65a8453cc4d789d4060fdaac8d76cf 878 SMART SM00387 490 607 4.3E-36 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_A0656 6f65a8453cc4d789d4060fdaac8d76cf 878 Pfam PF00512 His Kinase A (phospho-acceptor) domain 379 443 1.9E-18 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_A0656 6f65a8453cc4d789d4060fdaac8d76cf 878 Gene3D G3DSA:3.40.50.12330 747 812 3.7E-21 T 12-10-2018 Vc3S01_A0656 6f65a8453cc4d789d4060fdaac8d76cf 878 SMART SM00388 378 443 9.9E-23 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_A0656 6f65a8453cc4d789d4060fdaac8d76cf 878 SUPERFAMILY SSF52172 754 874 8.82E-36 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_A0656 6f65a8453cc4d789d4060fdaac8d76cf 878 SUPERFAMILY SSF47384 363 444 2.75E-19 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Vc3S01_A0656 6f65a8453cc4d789d4060fdaac8d76cf 878 Gene3D G3DSA:3.40.50.2300 813 876 1.1E-17 T 12-10-2018 Vc3S01_A0656 6f65a8453cc4d789d4060fdaac8d76cf 878 PRINTS PR00344 Bacterial sensor protein C-terminal signature 532 546 4.1E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_A0656 6f65a8453cc4d789d4060fdaac8d76cf 878 PRINTS PR00344 Bacterial sensor protein C-terminal signature 567 585 4.1E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_A0656 6f65a8453cc4d789d4060fdaac8d76cf 878 PRINTS PR00344 Bacterial sensor protein C-terminal signature 591 604 4.1E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_A0656 6f65a8453cc4d789d4060fdaac8d76cf 878 PRINTS PR00344 Bacterial sensor protein C-terminal signature 550 560 4.1E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_A0656 6f65a8453cc4d789d4060fdaac8d76cf 878 Pfam PF00072 Response regulator receiver domain 757 871 8.4E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A0656 6f65a8453cc4d789d4060fdaac8d76cf 878 Gene3D G3DSA:3.30.565.10 442 608 8.7E-50 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_A0656 6f65a8453cc4d789d4060fdaac8d76cf 878 SUPERFAMILY SSF55874 432 604 1.13E-43 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_0868 e838d270f19319dfc2963fda263b30d2 699 PIRSF PIRSF005419 9 699 2.0E-253 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Vc3S01_0868 e838d270f19319dfc2963fda263b30d2 699 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 147 170 - T 12-10-2018 IPR025505 FHIPEP conserved site Vc3S01_0868 e838d270f19319dfc2963fda263b30d2 699 Gene3D G3DSA:3.40.30.60 365 508 6.4E-54 T 12-10-2018 Vc3S01_0868 e838d270f19319dfc2963fda263b30d2 699 Gene3D G3DSA:1.10.8.540 509 596 2.1E-23 T 12-10-2018 Vc3S01_0868 e838d270f19319dfc2963fda263b30d2 699 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 22 696 1.6E-267 T 12-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 Vc3S01_0868 e838d270f19319dfc2963fda263b30d2 699 Gene3D G3DSA:1.10.490.80 600 697 4.8E-15 T 12-10-2018 Vc3S01_0868 e838d270f19319dfc2963fda263b30d2 699 Pfam PF00771 FHIPEP family 32 689 3.5E-270 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Vc3S01_0868 e838d270f19319dfc2963fda263b30d2 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 75 94 2.4E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Vc3S01_0868 e838d270f19319dfc2963fda263b30d2 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 161 179 2.4E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Vc3S01_0868 e838d270f19319dfc2963fda263b30d2 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 38 51 2.4E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Vc3S01_0868 e838d270f19319dfc2963fda263b30d2 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 191 208 2.4E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Vc3S01_0868 e838d270f19319dfc2963fda263b30d2 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 142 158 2.4E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Vc3S01_0868 e838d270f19319dfc2963fda263b30d2 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 242 256 2.4E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Vc3S01_A1468 2488f42cf0cff267ca1b672efad58d6f 763 SUPERFAMILY SSF55073 341 493 8.63E-41 T 12-10-2018 IPR029787 Nucleotide cyclase Vc3S01_A1468 2488f42cf0cff267ca1b672efad58d6f 763 Gene3D G3DSA:3.30.450.20 27 181 1.6E-9 T 12-10-2018 Vc3S01_A1468 2488f42cf0cff267ca1b672efad58d6f 763 SMART SM00052 502 747 8.2E-110 T 12-10-2018 IPR001633 EAL domain Vc3S01_A1468 2488f42cf0cff267ca1b672efad58d6f 763 Pfam PF00563 EAL domain 508 742 3.9E-71 T 12-10-2018 IPR001633 EAL domain Vc3S01_A1468 2488f42cf0cff267ca1b672efad58d6f 763 SMART SM00267 325 492 5.7E-51 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A1468 2488f42cf0cff267ca1b672efad58d6f 763 Gene3D G3DSA:3.30.70.270 330 504 6.8E-51 T 12-10-2018 Vc3S01_A1468 2488f42cf0cff267ca1b672efad58d6f 763 Gene3D G3DSA:3.20.20.450 505 760 5.8E-93 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_A1468 2488f42cf0cff267ca1b672efad58d6f 763 SUPERFAMILY SSF141868 507 754 1.31E-86 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_A1468 2488f42cf0cff267ca1b672efad58d6f 763 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 335 487 6.6E-34 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A1468 2488f42cf0cff267ca1b672efad58d6f 763 Pfam PF00990 Diguanylate cyclase, GGDEF domain 336 486 5.2E-40 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_1330 e3675dd58b38d77cd20823d04fe7ef78 107 Gene3D G3DSA:3.30.70.120 2 106 1.9E-28 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Vc3S01_1330 e3675dd58b38d77cd20823d04fe7ef78 107 SUPERFAMILY SSF102705 3 103 3.06E-16 T 12-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily Vc3S01_1440 a7dfac32bdfdc3252f912ef543f1766b 603 Gene3D G3DSA:2.80.10.50 490 596 2.3E-18 T 12-10-2018 Vc3S01_1440 a7dfac32bdfdc3252f912ef543f1766b 603 Pfam PF16683 Transglutaminase elicitor 95 430 3.8E-43 T 12-10-2018 IPR032048 Transglutaminase elicitor GO:0016755 Vc3S01_1440 a7dfac32bdfdc3252f912ef543f1766b 603 SUPERFAMILY SSF50370 497 580 3.48E-15 T 12-10-2018 IPR035992 Ricin B-like lectins Vc3S01_1440 a7dfac32bdfdc3252f912ef543f1766b 603 SMART SM00458 488 603 2.8E-8 T 12-10-2018 IPR000772 Ricin B, lectin domain Vc3S01_1440 a7dfac32bdfdc3252f912ef543f1766b 603 Pfam PF00652 Ricin-type beta-trefoil lectin domain 498 578 2.1E-12 T 12-10-2018 IPR000772 Ricin B, lectin domain Vc3S01_0900 3c4c20e7e5d5b3dece8e088e2f6ba0ea 310 SUPERFAMILY SSF53335 16 294 1.94E-50 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Vc3S01_0900 3c4c20e7e5d5b3dece8e088e2f6ba0ea 310 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 15 303 2.8E-97 T 12-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 Vc3S01_0900 3c4c20e7e5d5b3dece8e088e2f6ba0ea 310 Pfam PF05175 Methyltransferase small domain 134 216 6.5E-18 T 12-10-2018 IPR007848 Methyltransferase small domain GO:0008168 Vc3S01_0900 3c4c20e7e5d5b3dece8e088e2f6ba0ea 310 Gene3D G3DSA:1.10.8.10 16 106 1.2E-5 T 12-10-2018 Vc3S01_0900 3c4c20e7e5d5b3dece8e088e2f6ba0ea 310 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 204 210 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Vc3S01_0900 3c4c20e7e5d5b3dece8e088e2f6ba0ea 310 PIRSF PIRSF037167 2 307 8.6E-151 T 12-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 Vc3S01_0900 3c4c20e7e5d5b3dece8e088e2f6ba0ea 310 Gene3D G3DSA:3.40.50.150 109 283 3.9E-46 T 12-10-2018 Vc3S01_0900 3c4c20e7e5d5b3dece8e088e2f6ba0ea 310 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 13 295 6.5E-139 T 12-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 Vc3S01_0900 3c4c20e7e5d5b3dece8e088e2f6ba0ea 310 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 6 300 54.246 T 12-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 Vc3S01_2415 d4dab44ef40e289fd4f021b02fb0db92 378 Gene3D G3DSA:2.30.40.10 6 373 7.1E-143 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Vc3S01_2415 d4dab44ef40e289fd4f021b02fb0db92 378 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 1 374 4.3E-156 T 12-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 Vc3S01_2415 d4dab44ef40e289fd4f021b02fb0db92 378 SUPERFAMILY SSF51556 54 347 3.4E-101 T 12-10-2018 IPR032466 Metal-dependent hydrolase Vc3S01_2415 d4dab44ef40e289fd4f021b02fb0db92 378 PIRSF PIRSF038994 1 378 1.2E-121 T 12-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 Vc3S01_2415 d4dab44ef40e289fd4f021b02fb0db92 378 Gene3D G3DSA:3.20.20.140 55 341 7.1E-143 T 12-10-2018 Vc3S01_2415 d4dab44ef40e289fd4f021b02fb0db92 378 SUPERFAMILY SSF51338 1 53 7.71E-19 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Vc3S01_2415 d4dab44ef40e289fd4f021b02fb0db92 378 Pfam PF01979 Amidohydrolase family 51 374 4.2E-37 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Vc3S01_2484 31e818dddb7eabecf83fa332af19b437 318 Pfam PF00691 OmpA family 209 303 2.2E-23 T 12-10-2018 IPR006665 OmpA-like domain Vc3S01_2484 31e818dddb7eabecf83fa332af19b437 318 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 292 312 3.6E-5 T 12-10-2018 Vc3S01_2484 31e818dddb7eabecf83fa332af19b437 318 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 254 271 3.6E-5 T 12-10-2018 Vc3S01_2484 31e818dddb7eabecf83fa332af19b437 318 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 272 291 3.6E-5 T 12-10-2018 Vc3S01_2484 31e818dddb7eabecf83fa332af19b437 318 PRINTS PR01021 OMPA domain signature 209 231 6.3E-15 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Vc3S01_2484 31e818dddb7eabecf83fa332af19b437 318 PRINTS PR01021 OMPA domain signature 254 270 6.3E-15 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Vc3S01_2484 31e818dddb7eabecf83fa332af19b437 318 PRINTS PR01021 OMPA domain signature 239 254 6.3E-15 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Vc3S01_2484 31e818dddb7eabecf83fa332af19b437 318 SUPERFAMILY SSF56925 18 171 4.97E-29 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel Vc3S01_2484 31e818dddb7eabecf83fa332af19b437 318 SUPERFAMILY SSF103088 188 309 2.35E-36 T 12-10-2018 IPR036737 OmpA-like domain superfamily Vc3S01_2484 31e818dddb7eabecf83fa332af19b437 318 Pfam PF01389 OmpA-like transmembrane domain 19 171 2.1E-31 T 12-10-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 Vc3S01_2484 31e818dddb7eabecf83fa332af19b437 318 Gene3D G3DSA:2.40.160.20 5 186 9.1E-38 T 12-10-2018 Vc3S01_2484 31e818dddb7eabecf83fa332af19b437 318 Gene3D G3DSA:3.30.1330.60 187 311 1.4E-38 T 12-10-2018 IPR036737 OmpA-like domain superfamily Vc3S01_2267 e3f25984afa765ea1070ab67148f8a67 374 Pfam PF02687 FtsX-like permease family 268 367 8.1E-12 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Vc3S01_2267 e3f25984afa765ea1070ab67148f8a67 374 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 1 374 1.9E-124 T 12-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 Vc3S01_2267 e3f25984afa765ea1070ab67148f8a67 374 Pfam PF12704 MacB-like periplasmic core domain 2 181 1.4E-13 T 12-10-2018 IPR025857 MacB-like periplasmic core domain Vc3S01_1802 9aab66e823fee1c8827558ffcfdff5c9 1247 Pfam PF12561 ToxR activated gene A lipoprotein 723 857 9.3E-44 T 12-10-2018 IPR022218 ToxR activated gene A lipoprotein Vc3S01_1802 9aab66e823fee1c8827558ffcfdff5c9 1247 Gene3D G3DSA:3.30.160.280 1013 1079 5.7E-15 T 12-10-2018 Vc3S01_1802 9aab66e823fee1c8827558ffcfdff5c9 1247 Gene3D G3DSA:3.30.160.280 1186 1247 1.2E-11 T 12-10-2018 Vc3S01_1802 9aab66e823fee1c8827558ffcfdff5c9 1247 Gene3D G3DSA:2.60.40.10 172 265 7.7E-6 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_1802 9aab66e823fee1c8827558ffcfdff5c9 1247 Pfam PF10462 Peptidase M66 358 657 9.2E-80 T 12-10-2018 IPR019503 Peptidase M66 domain GO:0004222 Vc3S01_A1486 3d0df0d9bde09e51f4db440ae9599ea2 387 SUPERFAMILY SSF46626 225 367 1.05E-25 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Vc3S01_A1486 3d0df0d9bde09e51f4db440ae9599ea2 387 Gene3D G3DSA:1.10.760.10 264 387 3.6E-30 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Vc3S01_A1486 3d0df0d9bde09e51f4db440ae9599ea2 387 Gene3D G3DSA:1.10.287.90 25 119 7.1E-26 T 12-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A1486 3d0df0d9bde09e51f4db440ae9599ea2 387 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 191 239 - T 12-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A1486 3d0df0d9bde09e51f4db440ae9599ea2 387 Gene3D G3DSA:2.60.40.420 120 259 5.6E-53 T 12-10-2018 IPR008972 Cupredoxin Vc3S01_A1486 3d0df0d9bde09e51f4db440ae9599ea2 387 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 29 108 2.1E-16 T 12-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A1486 3d0df0d9bde09e51f4db440ae9599ea2 387 PRINTS PR01166 Cytochrome c oxidase subunit II signature 85 97 2.4E-40 T 12-10-2018 Vc3S01_A1486 3d0df0d9bde09e51f4db440ae9599ea2 387 PRINTS PR01166 Cytochrome c oxidase subunit II signature 119 138 2.4E-40 T 12-10-2018 Vc3S01_A1486 3d0df0d9bde09e51f4db440ae9599ea2 387 PRINTS PR01166 Cytochrome c oxidase subunit II signature 210 227 2.4E-40 T 12-10-2018 Vc3S01_A1486 3d0df0d9bde09e51f4db440ae9599ea2 387 PRINTS PR01166 Cytochrome c oxidase subunit II signature 97 117 2.4E-40 T 12-10-2018 Vc3S01_A1486 3d0df0d9bde09e51f4db440ae9599ea2 387 PRINTS PR01166 Cytochrome c oxidase subunit II signature 190 210 2.4E-40 T 12-10-2018 Vc3S01_A1486 3d0df0d9bde09e51f4db440ae9599ea2 387 PRINTS PR01166 Cytochrome c oxidase subunit II signature 166 187 2.4E-40 T 12-10-2018 Vc3S01_A1486 3d0df0d9bde09e51f4db440ae9599ea2 387 PRINTS PR01166 Cytochrome c oxidase subunit II signature 228 245 2.4E-40 T 12-10-2018 Vc3S01_A1486 3d0df0d9bde09e51f4db440ae9599ea2 387 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 38 255 3.9E-60 T 12-10-2018 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A1486 3d0df0d9bde09e51f4db440ae9599ea2 387 SUPERFAMILY SSF81464 15 117 2.62E-28 T 12-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A1486 3d0df0d9bde09e51f4db440ae9599ea2 387 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 123 245 6.1E-36 T 12-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A1486 3d0df0d9bde09e51f4db440ae9599ea2 387 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 283 356 7.6E-11 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A1486 3d0df0d9bde09e51f4db440ae9599ea2 387 SUPERFAMILY SSF49503 121 260 9.74E-53 T 12-10-2018 IPR008972 Cupredoxin Vc3S01_A1194 37bdd5e81bdd2c7ffe8a5f6fb68919d1 171 Gene3D G3DSA:3.90.79.10 1 167 7.8E-48 T 12-10-2018 Vc3S01_A1194 37bdd5e81bdd2c7ffe8a5f6fb68919d1 171 Pfam PF00293 NUDIX domain 33 147 1.4E-17 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Vc3S01_A1194 37bdd5e81bdd2c7ffe8a5f6fb68919d1 171 SUPERFAMILY SSF55811 3 169 4.06E-45 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Vc3S01_A1194 37bdd5e81bdd2c7ffe8a5f6fb68919d1 171 ProSitePatterns PS00893 Nudix box signature. 68 89 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Vc3S01_0025 d979041072884e9e71b07b5e6728e1a6 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 43 3.8E-26 T 12-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_0025 d979041072884e9e71b07b5e6728e1a6 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 16.4 T 12-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_0025 d979041072884e9e71b07b5e6728e1a6 44 Pfam PF00468 Ribosomal protein L34 1 43 4.9E-24 T 12-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_0025 d979041072884e9e71b07b5e6728e1a6 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 12-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_0025 d979041072884e9e71b07b5e6728e1a6 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 39 1.0E-14 T 12-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_A0491 256d49212ced0101cb07b8e54deb29c1 301 SUPERFAMILY SSF103088 168 290 1.7E-26 T 12-10-2018 IPR036737 OmpA-like domain superfamily Vc3S01_A0491 256d49212ced0101cb07b8e54deb29c1 301 PRINTS PR01021 OMPA domain signature 235 251 3.3E-17 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Vc3S01_A0491 256d49212ced0101cb07b8e54deb29c1 301 PRINTS PR01021 OMPA domain signature 220 235 3.3E-17 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Vc3S01_A0491 256d49212ced0101cb07b8e54deb29c1 301 PRINTS PR01021 OMPA domain signature 191 213 3.3E-17 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Vc3S01_A0491 256d49212ced0101cb07b8e54deb29c1 301 SUPERFAMILY SSF103088 52 162 1.31E-24 T 12-10-2018 IPR036737 OmpA-like domain superfamily Vc3S01_A0491 256d49212ced0101cb07b8e54deb29c1 301 Pfam PF00691 OmpA family 62 156 8.9E-18 T 12-10-2018 IPR006665 OmpA-like domain Vc3S01_A0491 256d49212ced0101cb07b8e54deb29c1 301 Pfam PF00691 OmpA family 191 285 1.8E-18 T 12-10-2018 IPR006665 OmpA-like domain Vc3S01_A0491 256d49212ced0101cb07b8e54deb29c1 301 Gene3D G3DSA:3.30.1330.60 174 291 2.6E-25 T 12-10-2018 IPR036737 OmpA-like domain superfamily Vc3S01_A0491 256d49212ced0101cb07b8e54deb29c1 301 Gene3D G3DSA:3.30.1330.60 42 162 3.2E-27 T 12-10-2018 IPR036737 OmpA-like domain superfamily Vc3S01_A1122 68ee174a83eab24eb4f9963a6ce772ad 312 Gene3D G3DSA:3.40.50.2300 1 133 6.0E-33 T 12-10-2018 Vc3S01_A1122 68ee174a83eab24eb4f9963a6ce772ad 312 Pfam PF00990 Diguanylate cyclase, GGDEF domain 144 305 3.2E-44 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A1122 68ee174a83eab24eb4f9963a6ce772ad 312 SUPERFAMILY SSF52172 1 149 4.41E-36 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_A1122 68ee174a83eab24eb4f9963a6ce772ad 312 Pfam PF00072 Response regulator receiver domain 3 110 4.9E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A1122 68ee174a83eab24eb4f9963a6ce772ad 312 SMART SM00448 1 113 5.3E-33 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A1122 68ee174a83eab24eb4f9963a6ce772ad 312 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 140 308 6.6E-47 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A1122 68ee174a83eab24eb4f9963a6ce772ad 312 SMART SM00267 133 309 1.7E-54 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A1122 68ee174a83eab24eb4f9963a6ce772ad 312 Gene3D G3DSA:3.30.70.270 134 311 1.6E-52 T 12-10-2018 Vc3S01_A1122 68ee174a83eab24eb4f9963a6ce772ad 312 SUPERFAMILY SSF55073 149 310 4.55E-45 T 12-10-2018 IPR029787 Nucleotide cyclase Vc3S01_2117 09eadbb9934c67aa61af264e4e5acb6a 282 Gene3D G3DSA:3.40.50.300 17 281 8.5E-75 T 12-10-2018 Vc3S01_2117 09eadbb9934c67aa61af264e4e5acb6a 282 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_2117 09eadbb9934c67aa61af264e4e5acb6a 282 Pfam PF00005 ABC transporter 51 190 9.0E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_2117 09eadbb9934c67aa61af264e4e5acb6a 282 SMART SM00382 49 238 1.7E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_2117 09eadbb9934c67aa61af264e4e5acb6a 282 SUPERFAMILY SSF52540 35 262 3.59E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0793 53e88e0c8fc3a287964737263fe53347 379 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 3 376 6.9E-145 T 12-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 Vc3S01_0793 53e88e0c8fc3a287964737263fe53347 379 SUPERFAMILY SSF53756 6 378 7.71E-29 T 12-10-2018 Vc3S01_0793 53e88e0c8fc3a287964737263fe53347 379 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 4 378 42.085 T 12-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 Vc3S01_0793 53e88e0c8fc3a287964737263fe53347 379 Pfam PF02684 Lipid-A-disaccharide synthetase 7 372 5.1E-131 T 12-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 Vc3S01_A0888 fc18464962d1c2a69d238aa61d3bbd66 290 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 57 79 - T 12-10-2018 IPR030470 UbiA prenyltransferase conserved site Vc3S01_A0888 fc18464962d1c2a69d238aa61d3bbd66 290 Gene3D G3DSA:1.10.357.140 13 167 1.5E-18 T 12-10-2018 Vc3S01_A0888 fc18464962d1c2a69d238aa61d3bbd66 290 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 3 275 2.1E-82 T 12-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 Vc3S01_A0888 fc18464962d1c2a69d238aa61d3bbd66 290 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 1 284 16.915 T 12-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 Vc3S01_A0888 fc18464962d1c2a69d238aa61d3bbd66 290 Pfam PF01040 UbiA prenyltransferase family 18 269 6.9E-54 T 12-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 Vc3S01_2691 54f653c0d33aad7080657e1e8575537b 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 3 553 8.0E-293 T 12-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 Vc3S01_2691 54f653c0d33aad7080657e1e8575537b 555 SUPERFAMILY SSF52540 303 527 1.52E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2691 54f653c0d33aad7080657e1e8575537b 555 Pfam PF00005 ABC transporter 340 473 7.6E-25 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_2691 54f653c0d33aad7080657e1e8575537b 555 Gene3D G3DSA:3.40.50.300 1 285 1.1E-85 T 12-10-2018 Vc3S01_2691 54f653c0d33aad7080657e1e8575537b 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_2691 54f653c0d33aad7080657e1e8575537b 555 Pfam PF12848 ABC transporter 230 306 2.7E-13 T 12-10-2018 IPR032781 ABC-transporter extension domain Vc3S01_2691 54f653c0d33aad7080657e1e8575537b 555 SUPERFAMILY SSF52540 9 242 2.03E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2691 54f653c0d33aad7080657e1e8575537b 555 Gene3D G3DSA:3.40.50.300 286 555 1.9E-76 T 12-10-2018 Vc3S01_2691 54f653c0d33aad7080657e1e8575537b 555 Pfam PF00005 ABC transporter 22 191 2.0E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_2691 54f653c0d33aad7080657e1e8575537b 555 SMART SM00382 31 236 7.3E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_2691 54f653c0d33aad7080657e1e8575537b 555 SMART SM00382 348 518 1.2E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_1791 1acb7b9a39954dde73978bf438aebf3f 1019 Gene3D G3DSA:3.30.70.1430 557 655 5.3E-242 T 12-10-2018 Vc3S01_1791 1acb7b9a39954dde73978bf438aebf3f 1019 Gene3D G3DSA:3.30.70.1320 138 328 5.3E-242 T 12-10-2018 Vc3S01_1791 1acb7b9a39954dde73978bf438aebf3f 1019 SUPERFAMILY SSF82866 295 495 3.79E-32 T 12-10-2018 Vc3S01_1791 1acb7b9a39954dde73978bf438aebf3f 1019 Gene3D G3DSA:1.20.1640.10 12 502 5.3E-242 T 12-10-2018 Vc3S01_1791 1acb7b9a39954dde73978bf438aebf3f 1019 Gene3D G3DSA:1.20.1640.10 503 1005 5.3E-242 T 12-10-2018 Vc3S01_1791 1acb7b9a39954dde73978bf438aebf3f 1019 Gene3D G3DSA:3.30.2090.10 182 274 5.3E-242 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Vc3S01_1791 1acb7b9a39954dde73978bf438aebf3f 1019 Pfam PF00873 AcrB/AcrD/AcrF family 3 1008 2.5E-159 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_1791 1acb7b9a39954dde73978bf438aebf3f 1019 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.6E-27 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_1791 1acb7b9a39954dde73978bf438aebf3f 1019 PRINTS PR00702 Acriflavin resistance protein family signature 388 412 1.6E-27 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_1791 1acb7b9a39954dde73978bf438aebf3f 1019 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 1.6E-27 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_1791 1acb7b9a39954dde73978bf438aebf3f 1019 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 1.6E-27 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_1791 1acb7b9a39954dde73978bf438aebf3f 1019 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.6E-27 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_1791 1acb7b9a39954dde73978bf438aebf3f 1019 PRINTS PR00702 Acriflavin resistance protein family signature 468 491 1.6E-27 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_1791 1acb7b9a39954dde73978bf438aebf3f 1019 Gene3D G3DSA:3.30.70.1440 656 855 5.3E-242 T 12-10-2018 Vc3S01_1791 1acb7b9a39954dde73978bf438aebf3f 1019 SUPERFAMILY SSF82693 140 322 1.26E-17 T 12-10-2018 Vc3S01_1791 1acb7b9a39954dde73978bf438aebf3f 1019 SUPERFAMILY SSF82714 187 270 3.27E-12 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Vc3S01_1791 1acb7b9a39954dde73978bf438aebf3f 1019 Gene3D G3DSA:3.30.70.1430 40 805 5.3E-242 T 12-10-2018 Vc3S01_1791 1acb7b9a39954dde73978bf438aebf3f 1019 SUPERFAMILY SSF82714 713 788 1.26E-9 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Vc3S01_1791 1acb7b9a39954dde73978bf438aebf3f 1019 Gene3D G3DSA:3.30.2090.10 707 797 5.3E-242 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Vc3S01_1791 1acb7b9a39954dde73978bf438aebf3f 1019 SUPERFAMILY SSF82866 791 1014 8.5E-45 T 12-10-2018 Vc3S01_1791 1acb7b9a39954dde73978bf438aebf3f 1019 SUPERFAMILY SSF82693 42 137 1.05E-17 T 12-10-2018 Vc3S01_A0320 d650cfcde57cbf015e07d72c9a5205cd 399 SUPERFAMILY SSF117143 73 360 6.54E-80 T 12-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like Vc3S01_A0320 d650cfcde57cbf015e07d72c9a5205cd 399 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 320 397 2.4E-17 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Vc3S01_A0320 d650cfcde57cbf015e07d72c9a5205cd 399 Gene3D G3DSA:2.60.98.20 144 281 5.2E-35 T 12-10-2018 IPR037058 Flagellar hook protein FlgE superfamily Vc3S01_A0320 d650cfcde57cbf015e07d72c9a5205cd 399 Pfam PF07559 Flagellar basal body protein FlaE 173 280 5.3E-24 T 12-10-2018 IPR011491 Flagellar hook protein FlgE Vc3S01_A0320 d650cfcde57cbf015e07d72c9a5205cd 399 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 381 9.7E-94 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Vc3S01_A0320 d650cfcde57cbf015e07d72c9a5205cd 399 Pfam PF00460 Flagella basal body rod protein 3 33 3.0E-9 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Vc3S01_A0872 a7e17a3bb03f866a3f29da71d6f4a5f8 534 Pfam PF01039 Carboxyl transferase domain 48 523 3.5E-148 T 12-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 Vc3S01_A0872 a7e17a3bb03f866a3f29da71d6f4a5f8 534 SUPERFAMILY SSF52096 23 269 2.11E-70 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Vc3S01_A0872 a7e17a3bb03f866a3f29da71d6f4a5f8 534 Gene3D G3DSA:3.90.226.10 272 534 7.9E-100 T 12-10-2018 Vc3S01_A0872 a7e17a3bb03f866a3f29da71d6f4a5f8 534 SUPERFAMILY SSF52096 237 517 4.03E-84 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Vc3S01_A0872 a7e17a3bb03f866a3f29da71d6f4a5f8 534 Gene3D G3DSA:3.90.226.10 1 269 1.1E-93 T 12-10-2018 Vc3S01_A1671 2a27c39b88ad4a0e0c6bc809efcf53fa 534 Gene3D G3DSA:1.10.3360.10 61 319 9.4E-71 T 12-10-2018 IPR023289 VPA0735-like domain superfamily Vc3S01_A1671 2a27c39b88ad4a0e0c6bc809efcf53fa 534 SUPERFAMILY SSF160935 36 530 2.88E-103 T 12-10-2018 Vc3S01_A1671 2a27c39b88ad4a0e0c6bc809efcf53fa 534 Gene3D G3DSA:2.60.120.600 355 533 1.5E-46 T 12-10-2018 IPR037049 Domain of unknown function DUF1214, C-terminal domain superfamily Vc3S01_A1671 2a27c39b88ad4a0e0c6bc809efcf53fa 534 Pfam PF06863 Protein of unknown function (DUF1254) 95 239 1.3E-22 T 12-10-2018 IPR010679 Domain of unknown function DUF1254 Vc3S01_A1671 2a27c39b88ad4a0e0c6bc809efcf53fa 534 Gene3D G3DSA:2.60.40.1610 94 255 9.4E-71 T 12-10-2018 IPR037050 Domain of unknown function DUF1254 superfamily Vc3S01_A1671 2a27c39b88ad4a0e0c6bc809efcf53fa 534 Pfam PF06742 Protein of unknown function (DUF1214) 406 515 3.1E-22 T 12-10-2018 IPR010621 Domain of unknown function DUF1214 Vc3S01_A0677 9b0d657b15369735cf849ae79084e1a6 188 Pfam PF09374 Predicted Peptidoglycan domain 111 178 9.6E-19 T 12-10-2018 IPR018537 Peptidoglycan binding domain Vc3S01_A0677 9b0d657b15369735cf849ae79084e1a6 188 Gene3D G3DSA:1.20.141.10 14 186 2.4E-37 T 12-10-2018 Vc3S01_A0677 9b0d657b15369735cf849ae79084e1a6 188 SUPERFAMILY SSF53955 15 180 1.46E-38 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily Vc3S01_A0677 9b0d657b15369735cf849ae79084e1a6 188 Pfam PF05838 Glycosyl hydrolase 108 21 108 9.2E-21 T 12-10-2018 IPR008565 Protein of unknown function DUF847 Vc3S01_1792 111c52a0a9f9b2f4d826fa29983f507e 374 Gene3D G3DSA:2.40.50.100 83 216 2.4E-69 T 12-10-2018 Vc3S01_1792 111c52a0a9f9b2f4d826fa29983f507e 374 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 63 368 1.3E-62 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Vc3S01_1792 111c52a0a9f9b2f4d826fa29983f507e 374 Gene3D G3DSA:2.40.30.170 69 293 2.4E-69 T 12-10-2018 Vc3S01_1792 111c52a0a9f9b2f4d826fa29983f507e 374 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 84 285 1.7E-13 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Vc3S01_1792 111c52a0a9f9b2f4d826fa29983f507e 374 SUPERFAMILY SSF111369 73 288 3.4E-23 T 12-10-2018 Vc3S01_1792 111c52a0a9f9b2f4d826fa29983f507e 374 Gene3D G3DSA:2.40.420.20 63 366 2.4E-69 T 12-10-2018 Vc3S01_1792 111c52a0a9f9b2f4d826fa29983f507e 374 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 95 115 1.0E-4 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Vc3S01_1792 111c52a0a9f9b2f4d826fa29983f507e 374 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 290 311 1.0E-4 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Vc3S01_1792 111c52a0a9f9b2f4d826fa29983f507e 374 Gene3D G3DSA:1.10.287.470 117 177 2.4E-69 T 12-10-2018 Vc3S01_2464 a03aefec5646e493e8686d51535b66c5 637 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 5 334 3.0E-60 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Vc3S01_2464 a03aefec5646e493e8686d51535b66c5 637 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 590 636 1.0E-9 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Vc3S01_2464 a03aefec5646e493e8686d51535b66c5 637 SUPERFAMILY SSF64518 146 636 1.7E-24 T 12-10-2018 Vc3S01_2464 a03aefec5646e493e8686d51535b66c5 637 PRINTS PR01005 Flagellar hook-associated protein signature 158 182 3.3E-12 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Vc3S01_2464 a03aefec5646e493e8686d51535b66c5 637 PRINTS PR01005 Flagellar hook-associated protein signature 360 382 3.3E-12 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Vc3S01_2464 a03aefec5646e493e8686d51535b66c5 637 PRINTS PR01005 Flagellar hook-associated protein signature 12 35 3.3E-12 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Vc3S01_2464 a03aefec5646e493e8686d51535b66c5 637 PRINTS PR01005 Flagellar hook-associated protein signature 125 145 3.3E-12 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Vc3S01_2464 a03aefec5646e493e8686d51535b66c5 637 PRINTS PR01005 Flagellar hook-associated protein signature 50 72 3.3E-12 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Vc3S01_2464 a03aefec5646e493e8686d51535b66c5 637 PRINTS PR01005 Flagellar hook-associated protein signature 407 424 3.3E-12 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Vc3S01_3192 0352f502d1177b7025689c730e137091 507 SUPERFAMILY SSF52540 188 501 3.69E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_3192 0352f502d1177b7025689c730e137091 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 289 303 3.2E-6 T 12-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 Vc3S01_3192 0352f502d1177b7025689c730e137091 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 341 353 3.2E-6 T 12-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 Vc3S01_3192 0352f502d1177b7025689c730e137091 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 209 224 3.2E-6 T 12-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 Vc3S01_3192 0352f502d1177b7025689c730e137091 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 317 330 3.2E-6 T 12-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 Vc3S01_3192 0352f502d1177b7025689c730e137091 507 Gene3D G3DSA:3.30.230.10 1 167 2.7E-6 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Vc3S01_3192 0352f502d1177b7025689c730e137091 507 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 401 493 4.6E-30 T 12-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain Vc3S01_3192 0352f502d1177b7025689c730e137091 507 SUPERFAMILY SSF54211 2 169 3.41E-30 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Vc3S01_3192 0352f502d1177b7025689c730e137091 507 SMART SM00382 210 390 1.6E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_3192 0352f502d1177b7025689c730e137091 507 Pfam PF01078 Magnesium chelatase, subunit ChlI 190 391 9.5E-90 T 12-10-2018 IPR000523 Magnesium chelatase ChlI domain Vc3S01_3192 0352f502d1177b7025689c730e137091 507 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 1.3E-48 T 12-10-2018 Vc3S01_3192 0352f502d1177b7025689c730e137091 507 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 493 3.1E-211 T 12-10-2018 IPR004482 Mg chelatase-related protein Vc3S01_3192 0352f502d1177b7025689c730e137091 507 Gene3D G3DSA:3.40.50.300 190 499 1.1E-55 T 12-10-2018 Vc3S01_1425 00418616a2574e1b1c99d10fb422ad27 579 Gene3D G3DSA:1.20.1560.10 3 319 3.1E-75 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Vc3S01_1425 00418616a2574e1b1c99d10fb422ad27 579 SUPERFAMILY SSF52540 336 571 1.33E-76 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_1425 00418616a2574e1b1c99d10fb422ad27 579 Pfam PF00664 ABC transporter transmembrane region 21 291 2.3E-43 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Vc3S01_1425 00418616a2574e1b1c99d10fb422ad27 579 Gene3D G3DSA:3.40.50.300 335 579 4.1E-74 T 12-10-2018 Vc3S01_1425 00418616a2574e1b1c99d10fb422ad27 579 Pfam PF00005 ABC transporter 352 500 1.6E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_1425 00418616a2574e1b1c99d10fb422ad27 579 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_1425 00418616a2574e1b1c99d10fb422ad27 579 SUPERFAMILY SSF90123 7 320 5.89E-73 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Vc3S01_1425 00418616a2574e1b1c99d10fb422ad27 579 SMART SM00382 361 547 1.9E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_A1577 e5a6d76dda4b0566c3ba88c70a441df4 250 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 39 57 1.1E-9 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Vc3S01_A1577 e5a6d76dda4b0566c3ba88c70a441df4 250 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 25 39 1.1E-9 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Vc3S01_A1577 e5a6d76dda4b0566c3ba88c70a441df4 250 Gene3D G3DSA:3.30.750.70 70 135 2.6E-7 T 12-10-2018 Vc3S01_A1577 e5a6d76dda4b0566c3ba88c70a441df4 250 ProSitePatterns PS00894 DeoR-type HTH domain signature. 7 41 - T 12-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 Vc3S01_A1577 e5a6d76dda4b0566c3ba88c70a441df4 250 Pfam PF00455 DeoR C terminal sensor domain 75 179 3.3E-28 T 12-10-2018 IPR014036 DeoR C-terminal sensor domain Vc3S01_A1577 e5a6d76dda4b0566c3ba88c70a441df4 250 Pfam PF08220 DeoR-like helix-turn-helix domain 7 59 2.0E-19 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Vc3S01_A1577 e5a6d76dda4b0566c3ba88c70a441df4 250 Gene3D G3DSA:1.10.10.10 1 57 1.3E-10 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A1577 e5a6d76dda4b0566c3ba88c70a441df4 250 SUPERFAMILY SSF46785 4 78 8.14E-14 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A1577 e5a6d76dda4b0566c3ba88c70a441df4 250 SMART SM01134 73 250 3.2E-41 T 12-10-2018 Vc3S01_A1577 e5a6d76dda4b0566c3ba88c70a441df4 250 SMART SM00420 7 59 9.1E-20 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Vc3S01_A1577 e5a6d76dda4b0566c3ba88c70a441df4 250 SUPERFAMILY SSF100950 74 248 4.95E-20 T 12-10-2018 IPR037171 NagB/RpiA transferase-like Vc3S01_1984 443d58a42b394a3709ce790a25d10d1e 147 Gene3D G3DSA:2.40.128.270 40 142 6.3E-30 T 12-10-2018 IPR038670 HslJ-like superfamily Vc3S01_1984 443d58a42b394a3709ce790a25d10d1e 147 Pfam PF03724 META domain 34 138 1.2E-27 T 12-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ Vc3S01_2671 e68c1648d9d71da12cb3d69094f409c1 229 Gene3D G3DSA:3.40.50.2300 1 126 1.4E-38 T 12-10-2018 Vc3S01_2671 e68c1648d9d71da12cb3d69094f409c1 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 7.9E-113 T 12-10-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 Vc3S01_2671 e68c1648d9d71da12cb3d69094f409c1 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 3.9E-28 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Vc3S01_2671 e68c1648d9d71da12cb3d69094f409c1 229 SUPERFAMILY SSF52172 3 183 5.58E-43 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_2671 e68c1648d9d71da12cb3d69094f409c1 229 SMART SM00862 150 225 1.3E-27 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Vc3S01_2671 e68c1648d9d71da12cb3d69094f409c1 229 Gene3D G3DSA:1.10.10.10 127 228 3.1E-40 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_2671 e68c1648d9d71da12cb3d69094f409c1 229 Pfam PF00072 Response regulator receiver domain 5 116 1.3E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_2671 e68c1648d9d71da12cb3d69094f409c1 229 SMART SM00448 3 116 3.3E-45 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_0945 1395c97b2cf65da4da016a3e6095ad39 315 PIRSF PIRSF020419 2 299 2.9E-77 T 12-10-2018 IPR016773 Ferric uptake regulator, CjrA, predicted Vc3S01_0945 1395c97b2cf65da4da016a3e6095ad39 315 SUPERFAMILY SSF159501 32 283 7.32E-77 T 12-10-2018 Vc3S01_0945 1395c97b2cf65da4da016a3e6095ad39 315 Pfam PF04187 Haem-binding uptake, Tiki superfamily, ChaN 56 255 4.5E-60 T 12-10-2018 IPR007314 Haem-binding uptake, Tiki superfamily, ChaN Vc3S01_0945 1395c97b2cf65da4da016a3e6095ad39 315 Gene3D G3DSA:1.10.8.760 155 219 1.8E-29 T 12-10-2018 Vc3S01_0945 1395c97b2cf65da4da016a3e6095ad39 315 Gene3D G3DSA:3.40.50.11550 44 269 1.8E-29 T 12-10-2018 Vc3S01_A1357 b93d67a57852c07126842b777ae57a99 985 PRINTS PR00344 Bacterial sensor protein C-terminal signature 678 691 6.4E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_A1357 b93d67a57852c07126842b777ae57a99 985 PRINTS PR00344 Bacterial sensor protein C-terminal signature 638 648 6.4E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_A1357 b93d67a57852c07126842b777ae57a99 985 PRINTS PR00344 Bacterial sensor protein C-terminal signature 654 672 6.4E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_A1357 b93d67a57852c07126842b777ae57a99 985 PRINTS PR00344 Bacterial sensor protein C-terminal signature 620 634 6.4E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_A1357 b93d67a57852c07126842b777ae57a99 985 SMART SM00448 712 832 7.7E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A1357 b93d67a57852c07126842b777ae57a99 985 Gene3D G3DSA:1.10.287.130 436 532 5.9E-27 T 12-10-2018 Vc3S01_A1357 b93d67a57852c07126842b777ae57a99 985 Gene3D G3DSA:3.40.50.2300 708 855 8.9E-33 T 12-10-2018 Vc3S01_A1357 b93d67a57852c07126842b777ae57a99 985 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 581 693 7.0E-30 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_A1357 b93d67a57852c07126842b777ae57a99 985 Gene3D G3DSA:3.30.565.10 533 697 2.5E-50 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_A1357 b93d67a57852c07126842b777ae57a99 985 TIGRFAM TIGR02956 TMAO_torS: TMAO reductase sytem sensor TorS 7 981 0.0 T 12-10-2018 IPR014302 Signal transduction histidine kinase, TMAO sensor TorS GO:0000155|GO:0000160|GO:0004673|GO:0016021 Vc3S01_A1357 b93d67a57852c07126842b777ae57a99 985 Gene3D G3DSA:1.20.120.160 870 985 5.3E-21 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 Vc3S01_A1357 b93d67a57852c07126842b777ae57a99 985 SMART SM00388 469 534 1.2E-22 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_A1357 b93d67a57852c07126842b777ae57a99 985 Gene3D G3DSA:1.20.58.920 47 179 1.7E-47 T 12-10-2018 IPR038188 TorS, sensor domain superfamily Vc3S01_A1357 b93d67a57852c07126842b777ae57a99 985 Gene3D G3DSA:1.20.58.920 180 322 7.3E-52 T 12-10-2018 IPR038188 TorS, sensor domain superfamily Vc3S01_A1357 b93d67a57852c07126842b777ae57a99 985 SUPERFAMILY SSF47384 457 535 5.1E-20 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Vc3S01_A1357 b93d67a57852c07126842b777ae57a99 985 Pfam PF00072 Response regulator receiver domain 714 832 1.2E-20 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A1357 b93d67a57852c07126842b777ae57a99 985 SUPERFAMILY SSF55874 523 697 1.2E-44 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_A1357 b93d67a57852c07126842b777ae57a99 985 SUPERFAMILY SSF52172 712 850 7.68E-33 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_A1357 b93d67a57852c07126842b777ae57a99 985 SMART SM00073 886 983 1.0E-5 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Vc3S01_A1357 b93d67a57852c07126842b777ae57a99 985 Pfam PF01627 Hpt domain 898 973 4.2E-13 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Vc3S01_A1357 b93d67a57852c07126842b777ae57a99 985 SUPERFAMILY SSF47226 875 983 1.57E-21 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 Vc3S01_A1357 b93d67a57852c07126842b777ae57a99 985 SMART SM00387 581 694 1.7E-38 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_A1357 b93d67a57852c07126842b777ae57a99 985 Pfam PF00512 His Kinase A (phospho-acceptor) domain 469 534 6.5E-19 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_A1357 b93d67a57852c07126842b777ae57a99 985 PIRSF PIRSF036437 1 985 0.0 T 12-10-2018 IPR014302 Signal transduction histidine kinase, TMAO sensor TorS GO:0000155|GO:0000160|GO:0004673|GO:0016021 Vc3S01_3088 727df3561e35c623e8a05cdd853bdaeb 144 SUPERFAMILY SSF55729 1 128 7.89E-18 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_3088 727df3561e35c623e8a05cdd853bdaeb 144 Gene3D G3DSA:3.40.630.30 2 143 2.8E-15 T 12-10-2018 Vc3S01_3088 727df3561e35c623e8a05cdd853bdaeb 144 Pfam PF00583 Acetyltransferase (GNAT) family 33 104 1.0E-7 T 12-10-2018 IPR000182 GNAT domain Vc3S01_0992 d14102d2d506cd0632e06c3bb9adeea0 1388 Gene3D G3DSA:2.130.10.30 959 1112 3.6E-19 T 12-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II Vc3S01_0992 d14102d2d506cd0632e06c3bb9adeea0 1388 Gene3D G3DSA:2.130.10.30 1217 1386 2.6E-27 T 12-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II Vc3S01_0992 d14102d2d506cd0632e06c3bb9adeea0 1388 SUPERFAMILY SSF50985 895 1132 5.23E-19 T 12-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II Vc3S01_0992 d14102d2d506cd0632e06c3bb9adeea0 1388 SUPERFAMILY SSF50985 1140 1368 7.76E-34 T 12-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II Vc3S01_A1538 f04a8711a9cfa3bae4780c69830e0c96 423 SMART SM01119 314 410 8.0E-30 T 12-10-2018 IPR026956 D-serine dehydratase-like domain Vc3S01_A1538 f04a8711a9cfa3bae4780c69830e0c96 423 Gene3D G3DSA:3.20.20.10 54 284 2.8E-135 T 12-10-2018 IPR029066 PLP-binding barrel Vc3S01_A1538 f04a8711a9cfa3bae4780c69830e0c96 423 Pfam PF01168 Alanine racemase, N-terminal domain 51 259 4.5E-16 T 12-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Vc3S01_A1538 f04a8711a9cfa3bae4780c69830e0c96 423 SUPERFAMILY SSF51419 52 283 1.98E-32 T 12-10-2018 IPR029066 PLP-binding barrel Vc3S01_A1538 f04a8711a9cfa3bae4780c69830e0c96 423 Gene3D G3DSA:2.40.37.20 38 423 2.8E-135 T 12-10-2018 Vc3S01_A1538 f04a8711a9cfa3bae4780c69830e0c96 423 Pfam PF14031 Putative serine dehydratase domain 314 408 4.1E-14 T 12-10-2018 IPR026956 D-serine dehydratase-like domain Vc3S01_1178 38fa7ff23cc92747c75b9017d5b7c308 127 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 2 125 4.5E-51 T 12-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 Vc3S01_1178 38fa7ff23cc92747c75b9017d5b7c308 127 Pfam PF01042 Endoribonuclease L-PSP 7 125 7.0E-44 T 12-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 Vc3S01_1178 38fa7ff23cc92747c75b9017d5b7c308 127 Gene3D G3DSA:3.30.1330.40 1 127 3.4E-53 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Vc3S01_1178 38fa7ff23cc92747c75b9017d5b7c308 127 SUPERFAMILY SSF55298 2 126 1.24E-47 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Vc3S01_1126 9b079e387b4dda50b69c879a560e8341 556 SUPERFAMILY SSF50249 189 277 4.18E-27 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Vc3S01_1126 9b079e387b4dda50b69c879a560e8341 556 PIRSF PIRSF002111 1 534 8.6E-217 T 12-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 Vc3S01_1126 9b079e387b4dda50b69c879a560e8341 556 SUPERFAMILY SSF50249 255 364 1.07E-28 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Vc3S01_1126 9b079e387b4dda50b69c879a560e8341 556 Pfam PF00575 S1 RNA binding domain 362 434 2.0E-20 T 12-10-2018 IPR003029 S1 domain GO:0003676 Vc3S01_1126 9b079e387b4dda50b69c879a560e8341 556 Pfam PF00575 S1 RNA binding domain 275 347 2.6E-21 T 12-10-2018 IPR003029 S1 domain GO:0003676 Vc3S01_1126 9b079e387b4dda50b69c879a560e8341 556 Pfam PF00575 S1 RNA binding domain 18 86 1.5E-6 T 12-10-2018 IPR003029 S1 domain GO:0003676 Vc3S01_1126 9b079e387b4dda50b69c879a560e8341 556 Pfam PF00575 S1 RNA binding domain 189 260 1.7E-21 T 12-10-2018 IPR003029 S1 domain GO:0003676 Vc3S01_1126 9b079e387b4dda50b69c879a560e8341 556 Pfam PF00575 S1 RNA binding domain 449 520 7.2E-14 T 12-10-2018 IPR003029 S1 domain GO:0003676 Vc3S01_1126 9b079e387b4dda50b69c879a560e8341 556 Pfam PF00575 S1 RNA binding domain 103 171 5.9E-8 T 12-10-2018 IPR003029 S1 domain GO:0003676 Vc3S01_1126 9b079e387b4dda50b69c879a560e8341 556 Gene3D G3DSA:2.40.50.140 187 268 4.0E-28 T 12-10-2018 Vc3S01_1126 9b079e387b4dda50b69c879a560e8341 556 Gene3D G3DSA:2.40.50.140 269 357 1.5E-31 T 12-10-2018 Vc3S01_1126 9b079e387b4dda50b69c879a560e8341 556 Gene3D G3DSA:2.40.50.140 358 444 2.6E-23 T 12-10-2018 Vc3S01_1126 9b079e387b4dda50b69c879a560e8341 556 SUPERFAMILY SSF50249 88 174 2.61E-13 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Vc3S01_1126 9b079e387b4dda50b69c879a560e8341 556 SUPERFAMILY SSF50249 4 112 1.89E-17 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Vc3S01_1126 9b079e387b4dda50b69c879a560e8341 556 PRINTS PR00681 Ribosomal protein S1 signature 155 175 3.4E-97 T 12-10-2018 Vc3S01_1126 9b079e387b4dda50b69c879a560e8341 556 PRINTS PR00681 Ribosomal protein S1 signature 108 124 3.4E-97 T 12-10-2018 Vc3S01_1126 9b079e387b4dda50b69c879a560e8341 556 PRINTS PR00681 Ribosomal protein S1 signature 21 39 3.4E-97 T 12-10-2018 Vc3S01_1126 9b079e387b4dda50b69c879a560e8341 556 PRINTS PR00681 Ribosomal protein S1 signature 126 143 3.4E-97 T 12-10-2018 Vc3S01_1126 9b079e387b4dda50b69c879a560e8341 556 PRINTS PR00681 Ribosomal protein S1 signature 330 348 3.4E-97 T 12-10-2018 Vc3S01_1126 9b079e387b4dda50b69c879a560e8341 556 PRINTS PR00681 Ribosomal protein S1 signature 212 233 3.4E-97 T 12-10-2018 Vc3S01_1126 9b079e387b4dda50b69c879a560e8341 556 PRINTS PR00681 Ribosomal protein S1 signature 290 309 3.4E-97 T 12-10-2018 Vc3S01_1126 9b079e387b4dda50b69c879a560e8341 556 PRINTS PR00681 Ribosomal protein S1 signature 39 53 3.4E-97 T 12-10-2018 Vc3S01_1126 9b079e387b4dda50b69c879a560e8341 556 PRINTS PR00681 Ribosomal protein S1 signature 84 103 3.4E-97 T 12-10-2018 Vc3S01_1126 9b079e387b4dda50b69c879a560e8341 556 Gene3D G3DSA:2.40.50.140 6 98 1.0E-16 T 12-10-2018 Vc3S01_1126 9b079e387b4dda50b69c879a560e8341 556 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 3.6E-230 T 12-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 Vc3S01_1126 9b079e387b4dda50b69c879a560e8341 556 SUPERFAMILY SSF50249 347 438 1.12E-20 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Vc3S01_1126 9b079e387b4dda50b69c879a560e8341 556 SMART SM00316 190 260 6.0E-28 T 12-10-2018 IPR022967 RNA-binding domain, S1 Vc3S01_1126 9b079e387b4dda50b69c879a560e8341 556 SMART SM00316 275 347 1.8E-27 T 12-10-2018 IPR022967 RNA-binding domain, S1 Vc3S01_1126 9b079e387b4dda50b69c879a560e8341 556 SMART SM00316 103 171 1.2E-7 T 12-10-2018 IPR022967 RNA-binding domain, S1 Vc3S01_1126 9b079e387b4dda50b69c879a560e8341 556 SMART SM00316 362 434 6.5E-21 T 12-10-2018 IPR022967 RNA-binding domain, S1 Vc3S01_1126 9b079e387b4dda50b69c879a560e8341 556 SMART SM00316 449 520 1.9E-18 T 12-10-2018 IPR022967 RNA-binding domain, S1 Vc3S01_1126 9b079e387b4dda50b69c879a560e8341 556 SMART SM00316 19 87 0.0012 T 12-10-2018 IPR022967 RNA-binding domain, S1 Vc3S01_1126 9b079e387b4dda50b69c879a560e8341 556 SUPERFAMILY SSF50249 429 539 2.39E-22 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Vc3S01_1126 9b079e387b4dda50b69c879a560e8341 556 Gene3D G3DSA:2.40.50.140 445 528 1.5E-18 T 12-10-2018 Vc3S01_1126 9b079e387b4dda50b69c879a560e8341 556 Gene3D G3DSA:2.40.50.140 99 178 1.5E-5 T 12-10-2018 Vc3S01_0878 dff045c1cb20c6f035a88be390ce1c3a 164 SMART SM00260 16 153 2.5E-50 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Vc3S01_0878 dff045c1cb20c6f035a88be390ce1c3a 164 SUPERFAMILY SSF50341 15 158 9.29E-42 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Vc3S01_0878 dff045c1cb20c6f035a88be390ce1c3a 164 Gene3D G3DSA:2.30.30.40 22 147 7.0E-43 T 12-10-2018 Vc3S01_0878 dff045c1cb20c6f035a88be390ce1c3a 164 Gene3D G3DSA:2.40.50.180 39 148 7.0E-43 T 12-10-2018 Vc3S01_0878 dff045c1cb20c6f035a88be390ce1c3a 164 Pfam PF01584 CheW-like domain 20 155 4.7E-40 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Vc3S01_2187 edd6fe23f3158d4989e94cfeaaf0fb4d 450 Gene3D G3DSA:3.40.50.10070 23 184 5.6E-49 T 12-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 Vc3S01_2187 edd6fe23f3158d4989e94cfeaaf0fb4d 450 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 17 447 2.4E-168 T 12-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 Vc3S01_2187 edd6fe23f3158d4989e94cfeaaf0fb4d 450 Pfam PF07676 WD40-like Beta Propeller Repeat 222 248 2.9E-8 T 12-10-2018 IPR011659 WD40-like Beta Propeller Vc3S01_2187 edd6fe23f3158d4989e94cfeaaf0fb4d 450 Pfam PF07676 WD40-like Beta Propeller Repeat 257 292 1.9E-6 T 12-10-2018 IPR011659 WD40-like Beta Propeller Vc3S01_2187 edd6fe23f3158d4989e94cfeaaf0fb4d 450 Pfam PF07676 WD40-like Beta Propeller Repeat 300 336 4.3E-14 T 12-10-2018 IPR011659 WD40-like Beta Propeller Vc3S01_2187 edd6fe23f3158d4989e94cfeaaf0fb4d 450 Pfam PF04052 TolB amino-terminal domain 24 126 1.9E-35 T 12-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 Vc3S01_2187 edd6fe23f3158d4989e94cfeaaf0fb4d 450 SUPERFAMILY SSF52964 29 181 1.96E-41 T 12-10-2018 Vc3S01_2187 edd6fe23f3158d4989e94cfeaaf0fb4d 450 SUPERFAMILY SSF69304 176 448 4.45E-57 T 12-10-2018 Vc3S01_2187 edd6fe23f3158d4989e94cfeaaf0fb4d 450 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 5 446 52.743 T 12-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 Vc3S01_2187 edd6fe23f3158d4989e94cfeaaf0fb4d 450 Gene3D G3DSA:2.120.10.30 185 450 1.5E-97 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Vc3S01_1743 1c8737bb4c14cf43a5756e457546bfcb 157 Gene3D G3DSA:3.40.190.10 37 156 5.2E-6 T 12-10-2018 Vc3S01_1743 1c8737bb4c14cf43a5756e457546bfcb 157 SUPERFAMILY SSF53850 33 154 3.0E-8 T 12-10-2018 Vc3S01_0140 28c4f113844b6dc0c323226b39f35429 227 Pfam PF01902 Diphthamide synthase 6 215 9.5E-24 T 12-10-2018 IPR002761 Diphthamide synthase domain MetaCyc: PWY-6482|MetaCyc: PWY-7546|Reactome: R-HSA-5358493 Vc3S01_0140 28c4f113844b6dc0c323226b39f35429 227 Gene3D G3DSA:3.40.50.620 2 145 1.1E-15 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Vc3S01_0140 28c4f113844b6dc0c323226b39f35429 227 SUPERFAMILY SSF52402 4 222 3.14E-55 T 12-10-2018 Vc3S01_0140 28c4f113844b6dc0c323226b39f35429 227 Gene3D G3DSA:3.90.1490.10 146 226 3.8E-8 T 12-10-2018 Vc3S01_2240 44af6faa272b1e086f0e2dd0b4be9b81 691 Pfam PF06733 DEAD_2 197 263 6.5E-5 T 12-10-2018 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 Vc3S01_2240 44af6faa272b1e086f0e2dd0b4be9b81 691 SMART SM00491 535 671 3.0E-27 T 12-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 Vc3S01_2240 44af6faa272b1e086f0e2dd0b4be9b81 691 SUPERFAMILY SSF52540 14 666 3.34E-16 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2240 44af6faa272b1e086f0e2dd0b4be9b81 691 Hamap MF_02205 ATP-dependent DNA helicase DinG [dinG]. 33 690 36.864 T 12-10-2018 IPR039000 ATP-dependent DNA helicase DinG GO:0004003 Vc3S01_2240 44af6faa272b1e086f0e2dd0b4be9b81 691 Pfam PF13307 Helicase C-terminal domain 526 684 4.3E-36 T 12-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 Vc3S01_2240 44af6faa272b1e086f0e2dd0b4be9b81 691 Gene3D G3DSA:3.40.50.300 499 689 1.6E-33 T 12-10-2018 Vc3S01_2240 44af6faa272b1e086f0e2dd0b4be9b81 691 Gene3D G3DSA:3.40.50.300 25 306 2.5E-40 T 12-10-2018 Vc3S01_2240 44af6faa272b1e086f0e2dd0b4be9b81 691 SUPERFAMILY SSF52540 511 666 3.99E-6 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A1176 cb0b58741771cef75f66cc918f7272b6 854 SUPERFAMILY SSF56014 634 809 3.4E-47 T 12-10-2018 Vc3S01_A1176 cb0b58741771cef75f66cc918f7272b6 854 PRINTS PR00397 Sirohaem Fe-binding site signature 680 698 7.3E-6 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Vc3S01_A1176 cb0b58741771cef75f66cc918f7272b6 854 PRINTS PR00397 Sirohaem Fe-binding site signature 637 655 7.3E-6 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Vc3S01_A1176 cb0b58741771cef75f66cc918f7272b6 854 Gene3D G3DSA:3.30.413.10 632 796 7.7E-32 T 12-10-2018 Vc3S01_A1176 cb0b58741771cef75f66cc918f7272b6 854 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 2.8E-8 T 12-10-2018 Vc3S01_A1176 cb0b58741771cef75f66cc918f7272b6 854 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 2.8E-8 T 12-10-2018 Vc3S01_A1176 cb0b58741771cef75f66cc918f7272b6 854 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 2.8E-8 T 12-10-2018 Vc3S01_A1176 cb0b58741771cef75f66cc918f7272b6 854 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 283 2.8E-8 T 12-10-2018 Vc3S01_A1176 cb0b58741771cef75f66cc918f7272b6 854 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 1.8E-15 T 12-10-2018 Vc3S01_A1176 cb0b58741771cef75f66cc918f7272b6 854 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 1.8E-15 T 12-10-2018 Vc3S01_A1176 cb0b58741771cef75f66cc918f7272b6 854 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 1.8E-15 T 12-10-2018 Vc3S01_A1176 cb0b58741771cef75f66cc918f7272b6 854 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 1.8E-15 T 12-10-2018 Vc3S01_A1176 cb0b58741771cef75f66cc918f7272b6 854 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.8E-15 T 12-10-2018 Vc3S01_A1176 cb0b58741771cef75f66cc918f7272b6 854 PIRSF PIRSF037149 1 836 0.0 T 12-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 Vc3S01_A1176 cb0b58741771cef75f66cc918f7272b6 854 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 680 696 - T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Vc3S01_A1176 cb0b58741771cef75f66cc918f7272b6 854 SUPERFAMILY SSF51905 3 184 6.07E-40 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_A1176 cb0b58741771cef75f66cc918f7272b6 854 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 801 0.0 T 12-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 Vc3S01_A1176 cb0b58741771cef75f66cc918f7272b6 854 SUPERFAMILY SSF55124 503 630 1.74E-30 T 12-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Vc3S01_A1176 cb0b58741771cef75f66cc918f7272b6 854 Pfam PF04324 BFD-like [2Fe-2S] binding domain 424 472 2.2E-14 T 12-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain Vc3S01_A1176 cb0b58741771cef75f66cc918f7272b6 854 Gene3D G3DSA:3.50.50.60 110 246 6.5E-82 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_A1176 cb0b58741771cef75f66cc918f7272b6 854 Gene3D G3DSA:3.50.50.60 7 283 6.5E-82 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_A1176 cb0b58741771cef75f66cc918f7272b6 854 Gene3D G3DSA:1.10.10.1100 424 478 2.3E-12 T 12-10-2018 Vc3S01_A1176 cb0b58741771cef75f66cc918f7272b6 854 SUPERFAMILY SSF51905 144 310 6.91E-26 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_A1176 cb0b58741771cef75f66cc918f7272b6 854 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 561 622 1.5E-9 T 12-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Vc3S01_A1176 cb0b58741771cef75f66cc918f7272b6 854 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 286 1.8E-52 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Vc3S01_A1176 cb0b58741771cef75f66cc918f7272b6 854 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 634 769 4.5E-15 T 12-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Vc3S01_0849 53f1e21c69add4c4887e828e12e7a70f 488 Gene3D G3DSA:1.10.8.60 309 385 2.1E-24 T 12-10-2018 Vc3S01_0849 53f1e21c69add4c4887e828e12e7a70f 488 Pfam PF00158 Sigma-54 interaction domain 137 304 3.8E-72 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Vc3S01_0849 53f1e21c69add4c4887e828e12e7a70f 488 Pfam PF06490 Flagellar regulatory protein FleQ 6 114 1.6E-29 T 12-10-2018 IPR010518 Flagellar regulatory FleQ Vc3S01_0849 53f1e21c69add4c4887e828e12e7a70f 488 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 349 358 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Vc3S01_0849 53f1e21c69add4c4887e828e12e7a70f 488 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 223 238 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Vc3S01_0849 53f1e21c69add4c4887e828e12e7a70f 488 SUPERFAMILY SSF46689 349 486 3.81E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_0849 53f1e21c69add4c4887e828e12e7a70f 488 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 161 174 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Vc3S01_0849 53f1e21c69add4c4887e828e12e7a70f 488 Pfam PF02954 Bacterial regulatory protein, Fis family 444 484 8.5E-15 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Vc3S01_0849 53f1e21c69add4c4887e828e12e7a70f 488 Gene3D G3DSA:3.40.50.2300 1 117 1.1E-8 T 12-10-2018 Vc3S01_0849 53f1e21c69add4c4887e828e12e7a70f 488 Gene3D G3DSA:1.10.10.60 420 488 1.7E-13 T 12-10-2018 Vc3S01_0849 53f1e21c69add4c4887e828e12e7a70f 488 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 450 467 1.3E-10 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Vc3S01_0849 53f1e21c69add4c4887e828e12e7a70f 488 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 467 487 1.3E-10 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Vc3S01_0849 53f1e21c69add4c4887e828e12e7a70f 488 SUPERFAMILY SSF52540 137 378 7.2E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0849 53f1e21c69add4c4887e828e12e7a70f 488 SMART SM00382 157 301 6.3E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_0849 53f1e21c69add4c4887e828e12e7a70f 488 SUPERFAMILY SSF52172 6 182 3.73E-5 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_0849 53f1e21c69add4c4887e828e12e7a70f 488 Gene3D G3DSA:3.40.50.300 125 308 2.2E-65 T 12-10-2018 Vc3S01_A1344 0a5bb25b7d26a1b87e2a91abcd9dfd06 583 SUPERFAMILY SSF53300 103 276 1.36E-14 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Vc3S01_A1344 0a5bb25b7d26a1b87e2a91abcd9dfd06 583 Gene3D G3DSA:3.40.50.410 101 284 1.5E-22 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Vc3S01_A1344 0a5bb25b7d26a1b87e2a91abcd9dfd06 583 SUPERFAMILY SSF48452 357 457 3.48E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_A1344 0a5bb25b7d26a1b87e2a91abcd9dfd06 583 Pfam PF13519 von Willebrand factor type A domain 106 211 1.0E-10 T 12-10-2018 IPR002035 von Willebrand factor, type A Vc3S01_A1228 b8eb9e9841827f7cae416c1e6075668f 231 Pfam PF09867 Uncharacterized protein conserved in bacteria (DUF2094) 11 139 2.8E-37 T 12-10-2018 IPR017748 T6S-associated protein TagF Vc3S01_A1228 b8eb9e9841827f7cae416c1e6075668f 231 PIRSF PIRSF029287 3 229 4.9E-32 T 12-10-2018 IPR017748 T6S-associated protein TagF Vc3S01_A1228 b8eb9e9841827f7cae416c1e6075668f 231 Gene3D G3DSA:3.40.1730.10 7 230 5.5E-60 T 12-10-2018 IPR038225 T6S-associated protein TagF superfamily Vc3S01_A1228 b8eb9e9841827f7cae416c1e6075668f 231 TIGRFAM TIGR03373 VI_minor_4: type VI secretion-associated protein, BMA_A0400 family 11 140 1.5E-41 T 12-10-2018 IPR017748 T6S-associated protein TagF Vc3S01_0152 b4b1098e58ea347c0a9c4a0fcb291f21 296 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 1 293 28.85 T 12-10-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 Vc3S01_0152 b4b1098e58ea347c0a9c4a0fcb291f21 296 SUPERFAMILY SSF50037 247 293 1.24E-10 T 12-10-2018 IPR008988 Transcriptional repressor, C-terminal Vc3S01_0152 b4b1098e58ea347c0a9c4a0fcb291f21 296 Gene3D G3DSA:2.30.30.100 247 289 8.0E-21 T 12-10-2018 Vc3S01_0152 b4b1098e58ea347c0a9c4a0fcb291f21 296 SUPERFAMILY SSF55681 46 244 1.24E-60 T 12-10-2018 Vc3S01_0152 b4b1098e58ea347c0a9c4a0fcb291f21 296 Pfam PF08279 HTH domain 1 35 1.1E-8 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 Vc3S01_0152 b4b1098e58ea347c0a9c4a0fcb291f21 296 SUPERFAMILY SSF46785 1 36 2.67E-6 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_0152 b4b1098e58ea347c0a9c4a0fcb291f21 296 Gene3D G3DSA:3.30.930.10 42 246 6.2E-65 T 12-10-2018 Vc3S01_0152 b4b1098e58ea347c0a9c4a0fcb291f21 296 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 58 293 4.5E-67 T 12-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Vc3S01_0152 b4b1098e58ea347c0a9c4a0fcb291f21 296 Gene3D G3DSA:1.10.10.10 1 40 6.2E-12 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_0152 b4b1098e58ea347c0a9c4a0fcb291f21 296 Pfam PF02237 Biotin protein ligase C terminal domain 247 293 6.4E-11 T 12-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Vc3S01_0152 b4b1098e58ea347c0a9c4a0fcb291f21 296 Pfam PF03099 Biotin/lipoate A/B protein ligase family 60 183 2.0E-19 T 12-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 Vc3S01_1518 908788d7dda207a40fa881c9817838ce 317 SUPERFAMILY SSF51735 2 142 9.89E-39 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_1518 908788d7dda207a40fa881c9817838ce 317 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 137 199 1.3E-4 T 12-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 Vc3S01_1518 908788d7dda207a40fa881c9817838ce 317 SUPERFAMILY SSF55347 127 292 2.83E-13 T 12-10-2018 Vc3S01_1518 908788d7dda207a40fa881c9817838ce 317 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 1 122 6.1E-21 T 12-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Vc3S01_1518 908788d7dda207a40fa881c9817838ce 317 Gene3D G3DSA:3.30.360.10 123 306 5.2E-54 T 12-10-2018 Vc3S01_1518 908788d7dda207a40fa881c9817838ce 317 Gene3D G3DSA:3.40.50.720 2 295 5.2E-54 T 12-10-2018 Vc3S01_1504 230caec09253314278c970e1f425e6b0 530 Gene3D G3DSA:2.60.120.380 431 530 1.2E-37 T 12-10-2018 Vc3S01_1504 230caec09253314278c970e1f425e6b0 530 SUPERFAMILY SSF54897 52 129 9.07E-12 T 12-10-2018 Vc3S01_1504 230caec09253314278c970e1f425e6b0 530 Pfam PF05922 Peptidase inhibitor I9 53 130 1.5E-9 T 12-10-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 Vc3S01_1504 230caec09253314278c970e1f425e6b0 530 SUPERFAMILY SSF89260 433 520 2.22E-5 T 12-10-2018 Vc3S01_1504 230caec09253314278c970e1f425e6b0 530 Gene3D G3DSA:3.40.50.200 140 423 1.9E-101 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Vc3S01_1504 230caec09253314278c970e1f425e6b0 530 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 450 515 1.5E-13 T 12-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial Vc3S01_1504 230caec09253314278c970e1f425e6b0 530 SUPERFAMILY SSF52743 145 395 1.03E-80 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Vc3S01_1504 230caec09253314278c970e1f425e6b0 530 Gene3D G3DSA:3.30.70.80 41 126 3.8E-13 T 12-10-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 Vc3S01_1504 230caec09253314278c970e1f425e6b0 530 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 357 367 - T 12-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site Vc3S01_1504 230caec09253314278c970e1f425e6b0 530 PRINTS PR00723 Subtilisin serine protease family (S8) signature 205 218 6.3E-20 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related Vc3S01_1504 230caec09253314278c970e1f425e6b0 530 PRINTS PR00723 Subtilisin serine protease family (S8) signature 167 186 6.3E-20 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related Vc3S01_1504 230caec09253314278c970e1f425e6b0 530 PRINTS PR00723 Subtilisin serine protease family (S8) signature 356 372 6.3E-20 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related Vc3S01_1504 230caec09253314278c970e1f425e6b0 530 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 209 219 - T 12-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site Vc3S01_1504 230caec09253314278c970e1f425e6b0 530 Pfam PF00082 Subtilase family 167 393 2.1E-36 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 Vc3S01_1504 230caec09253314278c970e1f425e6b0 530 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 172 183 - T 12-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site Vc3S01_A1380 f6aafd6036b983c1f4cc7225edb853f8 327 Pfam PF02653 Branched-chain amino acid transport system / permease component 51 319 2.1E-53 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Vc3S01_1458 a0259d098d7caf13eb8009886cafc15d 1338 Pfam PF00271 Helicase conserved C-terminal domain 329 443 2.5E-11 T 12-10-2018 IPR001650 Helicase, C-terminal Vc3S01_1458 a0259d098d7caf13eb8009886cafc15d 1338 Pfam PF00270 DEAD/DEAH box helicase 128 274 4.1E-8 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Vc3S01_1458 a0259d098d7caf13eb8009886cafc15d 1338 Gene3D G3DSA:1.20.120.1080 488 590 4.9E-18 T 12-10-2018 Vc3S01_1458 a0259d098d7caf13eb8009886cafc15d 1338 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 662 738 6.6E-23 T 12-10-2018 IPR011709 Domain of unknown function DUF1605 Vc3S01_1458 a0259d098d7caf13eb8009886cafc15d 1338 SMART SM00490 344 444 8.4E-15 T 12-10-2018 IPR001650 Helicase, C-terminal Vc3S01_1458 a0259d098d7caf13eb8009886cafc15d 1338 Pfam PF04408 Helicase associated domain (HA2) 506 597 4.1E-18 T 12-10-2018 IPR007502 Helicase-associated domain GO:0004386 Vc3S01_1458 a0259d098d7caf13eb8009886cafc15d 1338 Gene3D G3DSA:3.40.50.300 65 293 1.2E-78 T 12-10-2018 Vc3S01_1458 a0259d098d7caf13eb8009886cafc15d 1338 SMART SM00487 116 300 2.3E-31 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Vc3S01_1458 a0259d098d7caf13eb8009886cafc15d 1338 SUPERFAMILY SSF52540 115 607 8.32E-116 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_1458 a0259d098d7caf13eb8009886cafc15d 1338 Gene3D G3DSA:3.40.50.300 294 461 1.7E-55 T 12-10-2018 Vc3S01_1458 a0259d098d7caf13eb8009886cafc15d 1338 SMART SM00382 133 424 3.5E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_1458 a0259d098d7caf13eb8009886cafc15d 1338 SMART SM00847 504 599 4.4E-36 T 12-10-2018 IPR007502 Helicase-associated domain GO:0004386 Vc3S01_1458 a0259d098d7caf13eb8009886cafc15d 1338 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 55 1336 0.0 T 12-10-2018 IPR010222 RNA helicase HrpA GO:0004004 Vc3S01_1458 a0259d098d7caf13eb8009886cafc15d 1338 Pfam PF11898 Domain of unknown function (DUF3418) 752 1336 1.6E-229 T 12-10-2018 IPR024590 RNA helicase HrpA, C-terminal Vc3S01_2847 19045417863d3dd6534fefaf4d149b43 209 SUPERFAMILY SSF48008 62 202 9.94E-14 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Vc3S01_2847 19045417863d3dd6534fefaf4d149b43 209 SMART SM00895 66 195 2.5E-4 T 12-10-2018 IPR011711 GntR, C-terminal Vc3S01_2847 19045417863d3dd6534fefaf4d149b43 209 SMART SM00345 1 56 2.4E-5 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Vc3S01_2847 19045417863d3dd6534fefaf4d149b43 209 Pfam PF00392 Bacterial regulatory proteins, gntR family 2 56 2.1E-13 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Vc3S01_2847 19045417863d3dd6534fefaf4d149b43 209 Gene3D G3DSA:1.20.120.530 60 207 2.8E-16 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Vc3S01_2847 19045417863d3dd6534fefaf4d149b43 209 SUPERFAMILY SSF46785 2 64 4.23E-11 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_2847 19045417863d3dd6534fefaf4d149b43 209 Gene3D G3DSA:1.10.10.10 1 57 1.5E-12 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_2847 19045417863d3dd6534fefaf4d149b43 209 Pfam PF07729 FCD domain 66 193 1.5E-13 T 12-10-2018 IPR011711 GntR, C-terminal Vc3S01_A1330 0858d7c938c049cd669f8e7f6f823f44 111 Gene3D G3DSA:2.40.50.200 13 111 9.7E-35 T 12-10-2018 IPR036700 Bacterial OB-fold superfamily Vc3S01_A1330 0858d7c938c049cd669f8e7f6f823f44 111 Pfam PF04076 Bacterial OB fold (BOF) protein 20 110 7.4E-30 T 12-10-2018 IPR005220 Bacterial OB-fold Vc3S01_A1330 0858d7c938c049cd669f8e7f6f823f44 111 SUPERFAMILY SSF101756 7 111 5.89E-34 T 12-10-2018 IPR036700 Bacterial OB-fold superfamily Vc3S01_A0311 d8f4ccd827f66fb09eca4e7663ba5f78 86 Pfam PF03891 Domain of unknown function (DUF333) 35 78 3.3E-16 T 12-10-2018 IPR005590 Protein of unknown function DUF333 Vc3S01_1140 6b78c35e48cf31e32c706d6e25f5f48c 703 Pfam PF13899 Thioredoxin-like 587 673 7.0E-11 T 12-10-2018 Vc3S01_1140 6b78c35e48cf31e32c706d6e25f5f48c 703 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 308 511 9.0E-15 T 12-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 Vc3S01_1140 6b78c35e48cf31e32c706d6e25f5f48c 703 Pfam PF11412 Disulphide bond corrector protein DsbC 58 162 4.3E-16 T 12-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain Vc3S01_1140 6b78c35e48cf31e32c706d6e25f5f48c 703 SUPERFAMILY SSF52833 580 677 3.05E-12 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Vc3S01_1140 6b78c35e48cf31e32c706d6e25f5f48c 703 ProSitePatterns PS00194 Thioredoxin family active site. 606 624 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Vc3S01_1140 6b78c35e48cf31e32c706d6e25f5f48c 703 Gene3D G3DSA:3.40.30.10 584 697 1.3E-8 T 12-10-2018 Vc3S01_1817 05f4b97bd41d26d77d63cb38717595c7 776 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 519 628 5.1E-25 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_1817 05f4b97bd41d26d77d63cb38717595c7 776 Gene3D G3DSA:3.40.50.2300 653 776 8.2E-28 T 12-10-2018 Vc3S01_1817 05f4b97bd41d26d77d63cb38717595c7 776 Pfam PF00072 Response regulator receiver domain 663 770 8.9E-20 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_1817 05f4b97bd41d26d77d63cb38717595c7 776 PRINTS PR00344 Bacterial sensor protein C-terminal signature 576 586 4.6E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_1817 05f4b97bd41d26d77d63cb38717595c7 776 PRINTS PR00344 Bacterial sensor protein C-terminal signature 591 609 4.6E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_1817 05f4b97bd41d26d77d63cb38717595c7 776 PRINTS PR00344 Bacterial sensor protein C-terminal signature 558 572 4.6E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_1817 05f4b97bd41d26d77d63cb38717595c7 776 PRINTS PR00344 Bacterial sensor protein C-terminal signature 615 628 4.6E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_1817 05f4b97bd41d26d77d63cb38717595c7 776 Gene3D G3DSA:1.10.287.130 376 468 4.3E-22 T 12-10-2018 Vc3S01_1817 05f4b97bd41d26d77d63cb38717595c7 776 Gene3D G3DSA:3.30.565.10 471 634 7.1E-39 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_1817 05f4b97bd41d26d77d63cb38717595c7 776 Pfam PF00512 His Kinase A (phospho-acceptor) domain 406 469 2.8E-15 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_1817 05f4b97bd41d26d77d63cb38717595c7 776 SMART SM00387 518 631 1.7E-30 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_1817 05f4b97bd41d26d77d63cb38717595c7 776 SMART SM00388 405 470 2.2E-17 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_1817 05f4b97bd41d26d77d63cb38717595c7 776 SUPERFAMILY SSF47384 391 469 1.61E-16 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Vc3S01_1817 05f4b97bd41d26d77d63cb38717595c7 776 SMART SM00448 660 770 1.6E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_1817 05f4b97bd41d26d77d63cb38717595c7 776 SUPERFAMILY SSF55874 459 629 6.81E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_1817 05f4b97bd41d26d77d63cb38717595c7 776 SUPERFAMILY SSF52172 658 774 3.84E-29 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_A0612 57a7a91f76178da495243aa4e96e0da8 618 SMART SM00563 450 566 1.0E-30 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Vc3S01_A0612 57a7a91f76178da495243aa4e96e0da8 618 SUPERFAMILY SSF69593 378 601 6.15E-30 T 12-10-2018 Vc3S01_A0612 57a7a91f76178da495243aa4e96e0da8 618 SUPERFAMILY SSF103473 6 421 3.92E-25 T 12-10-2018 IPR036259 MFS transporter superfamily Vc3S01_A0612 57a7a91f76178da495243aa4e96e0da8 618 Pfam PF01553 Acyltransferase 435 563 9.7E-26 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Vc3S01_A0612 57a7a91f76178da495243aa4e96e0da8 618 Gene3D G3DSA:1.20.1250.20 6 415 7.2E-22 T 12-10-2018 Vc3S01_A0612 57a7a91f76178da495243aa4e96e0da8 618 Pfam PF07690 Major Facilitator Superfamily 39 379 2.2E-13 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Vc3S01_0334 a1bd85cd758d4cba663faf02aace3fe3 550 Gene3D G3DSA:1.10.1390.10 508 550 3.6E-20 T 12-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_0334 a1bd85cd758d4cba663faf02aace3fe3 550 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 47 525 42.951 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_0334 a1bd85cd758d4cba663faf02aace3fe3 550 Gene3D G3DSA:3.40.50.10490 13 507 8.4E-241 T 12-10-2018 Vc3S01_0334 a1bd85cd758d4cba663faf02aace3fe3 550 SUPERFAMILY SSF53697 6 548 2.11E-226 T 12-10-2018 Vc3S01_0334 a1bd85cd758d4cba663faf02aace3fe3 550 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 266 279 - T 12-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_0334 a1bd85cd758d4cba663faf02aace3fe3 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 151 170 2.2E-56 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_0334 a1bd85cd758d4cba663faf02aace3fe3 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 262 280 2.2E-56 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_0334 a1bd85cd758d4cba663faf02aace3fe3 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 498 511 2.2E-56 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_0334 a1bd85cd758d4cba663faf02aace3fe3 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 466 484 2.2E-56 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_0334 a1bd85cd758d4cba663faf02aace3fe3 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 484 498 2.2E-56 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_0334 a1bd85cd758d4cba663faf02aace3fe3 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 339 360 2.2E-56 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_0334 a1bd85cd758d4cba663faf02aace3fe3 550 Gene3D G3DSA:3.40.50.10490 99 292 8.4E-241 T 12-10-2018 Vc3S01_0334 a1bd85cd758d4cba663faf02aace3fe3 550 Pfam PF00342 Phosphoglucose isomerase 53 542 1.2E-253 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_0334 a1bd85cd758d4cba663faf02aace3fe3 550 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 498 515 - T 12-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_0245 36d0a89678c58da6452a3c4fde689063 372 Pfam PF03193 RsgA GTPase 118 295 3.7E-58 T 12-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 Vc3S01_0245 36d0a89678c58da6452a3c4fde689063 372 Gene3D G3DSA:3.40.50.300 121 294 2.0E-50 T 12-10-2018 Vc3S01_0245 36d0a89678c58da6452a3c4fde689063 372 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 93 353 4.8E-92 T 12-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 Vc3S01_0245 36d0a89678c58da6452a3c4fde689063 372 Gene3D G3DSA:1.10.40.50 295 369 1.4E-24 T 12-10-2018 Vc3S01_0245 36d0a89678c58da6452a3c4fde689063 372 SUPERFAMILY SSF52540 132 356 1.21E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0245 36d0a89678c58da6452a3c4fde689063 372 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 59 359 37.778 T 12-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 Vc3S01_0245 36d0a89678c58da6452a3c4fde689063 372 Gene3D G3DSA:2.40.50.140 54 120 1.3E-21 T 12-10-2018 Vc3S01_3212 df5a77583da573cd2a693271abce75ab 112 Pfam PF03899 ATP synthase I chain 2 94 1.8E-20 T 12-10-2018 IPR005598 ATP synthase protein I Vc3S01_A1683 fc58749a482453362db7bdaf041130d7 271 SUPERFAMILY SSF47413 3 71 2.34E-8 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Vc3S01_A1683 fc58749a482453362db7bdaf041130d7 271 Gene3D G3DSA:1.10.260.40 4 118 8.9E-10 T 12-10-2018 Vc3S01_A1683 fc58749a482453362db7bdaf041130d7 271 SMART SM00530 10 73 0.0058 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Vc3S01_0084 114df89d35492e545832a0f9361e423a 237 SUPERFAMILY SSF52343 104 235 5.89E-34 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Vc3S01_0084 114df89d35492e545832a0f9361e423a 237 SUPERFAMILY SSF63380 2 101 5.18E-17 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Vc3S01_0084 114df89d35492e545832a0f9361e423a 237 Gene3D G3DSA:2.40.30.10 1 102 1.2E-21 T 12-10-2018 Vc3S01_0084 114df89d35492e545832a0f9361e423a 237 Pfam PF00175 Oxidoreductase NAD-binding domain 112 215 1.7E-22 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 Vc3S01_0084 114df89d35492e545832a0f9361e423a 237 Gene3D G3DSA:3.40.50.80 103 237 1.2E-29 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Vc3S01_0084 114df89d35492e545832a0f9361e423a 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 46 53 7.5E-14 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Vc3S01_0084 114df89d35492e545832a0f9361e423a 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 95 104 7.5E-14 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Vc3S01_0084 114df89d35492e545832a0f9361e423a 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 30 42 7.5E-14 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Vc3S01_0084 114df89d35492e545832a0f9361e423a 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 111 130 7.5E-14 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Vc3S01_0084 114df89d35492e545832a0f9361e423a 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 136 145 7.5E-14 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Vc3S01_A1035 e7f890ffec2a2611e6aa222ec7b3c305 377 Gene3D G3DSA:3.40.930.10 143 275 2.5E-6 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 Vc3S01_A1035 e7f890ffec2a2611e6aa222ec7b3c305 377 SUPERFAMILY SSF55804 145 276 2.22E-18 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 Vc3S01_A1035 e7f890ffec2a2611e6aa222ec7b3c305 377 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 299 306 - T 12-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site Vc3S01_A1035 e7f890ffec2a2611e6aa222ec7b3c305 377 Pfam PF00381 PTS HPr component phosphorylation site 292 370 3.3E-26 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like Vc3S01_A1035 e7f890ffec2a2611e6aa222ec7b3c305 377 Gene3D G3DSA:3.30.1340.10 289 375 1.5E-27 T 12-10-2018 IPR035895 HPr-like superfamily Vc3S01_A1035 e7f890ffec2a2611e6aa222ec7b3c305 377 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 193 275 1.3E-4 T 12-10-2018 IPR002178 PTS EIIA type-2 domain Vc3S01_A1035 e7f890ffec2a2611e6aa222ec7b3c305 377 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 4 139 4.7E-34 T 12-10-2018 IPR002178 PTS EIIA type-2 domain Vc3S01_A1035 e7f890ffec2a2611e6aa222ec7b3c305 377 SUPERFAMILY SSF55594 291 376 5.63E-24 T 12-10-2018 IPR035895 HPr-like superfamily Vc3S01_A1035 e7f890ffec2a2611e6aa222ec7b3c305 377 PRINTS PR00107 Phosphocarrier protein signature 342 359 6.3E-19 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like Vc3S01_A1035 e7f890ffec2a2611e6aa222ec7b3c305 377 PRINTS PR00107 Phosphocarrier protein signature 299 315 6.3E-19 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like Vc3S01_A1035 e7f890ffec2a2611e6aa222ec7b3c305 377 PRINTS PR00107 Phosphocarrier protein signature 327 342 6.3E-19 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like Vc3S01_A1035 e7f890ffec2a2611e6aa222ec7b3c305 377 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 47 63 - T 12-10-2018 IPR002178 PTS EIIA type-2 domain Vc3S01_A1035 e7f890ffec2a2611e6aa222ec7b3c305 377 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 292 370 2.3E-23 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like Vc3S01_A1035 e7f890ffec2a2611e6aa222ec7b3c305 377 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 328 343 - T 12-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site Vc3S01_A1035 e7f890ffec2a2611e6aa222ec7b3c305 377 Gene3D G3DSA:3.40.930.10 1 142 3.5E-41 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 Vc3S01_A1035 e7f890ffec2a2611e6aa222ec7b3c305 377 SUPERFAMILY SSF55804 4 140 6.02E-39 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 Vc3S01_2510 f4f2fc8fa81badc339c781b60944e8a6 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 45.081 T 12-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 Vc3S01_2510 f4f2fc8fa81badc339c781b60944e8a6 363 Gene3D G3DSA:1.10.150.300 120 200 2.4E-150 T 12-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 Vc3S01_2510 f4f2fc8fa81badc339c781b60944e8a6 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 2.1E-169 T 12-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 Vc3S01_2510 f4f2fc8fa81badc339c781b60944e8a6 363 SUPERFAMILY SSF81271 279 363 5.01E-36 T 12-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 Vc3S01_2510 f4f2fc8fa81badc339c781b60944e8a6 363 SUPERFAMILY SSF52540 3 301 3.69E-84 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2510 f4f2fc8fa81badc339c781b60944e8a6 363 Pfam PF01926 50S ribosome-binding GTPase 5 121 1.2E-21 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Vc3S01_2510 f4f2fc8fa81badc339c781b60944e8a6 363 Gene3D G3DSA:3.10.20.30 48 362 2.4E-150 T 12-10-2018 IPR012675 Beta-grasp domain superfamily Vc3S01_2510 f4f2fc8fa81badc339c781b60944e8a6 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 4.4E-34 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Vc3S01_2510 f4f2fc8fa81badc339c781b60944e8a6 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 4.4E-34 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Vc3S01_2510 f4f2fc8fa81badc339c781b60944e8a6 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 4.4E-34 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Vc3S01_2510 f4f2fc8fa81badc339c781b60944e8a6 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 4.4E-34 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Vc3S01_2510 f4f2fc8fa81badc339c781b60944e8a6 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 1.2E-38 T 12-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 Vc3S01_2510 f4f2fc8fa81badc339c781b60944e8a6 363 Gene3D G3DSA:3.40.50.300 4 278 2.4E-150 T 12-10-2018 Vc3S01_2510 f4f2fc8fa81badc339c781b60944e8a6 363 PIRSF PIRSF006641 1 363 1.3E-157 T 12-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 Vc3S01_1693 45700cd29747436bc7ae16566e642fdb 272 SUPERFAMILY SSF53850 29 256 1.75E-32 T 12-10-2018 Vc3S01_1693 45700cd29747436bc7ae16566e642fdb 272 Gene3D G3DSA:3.40.190.10 106 218 3.8E-98 T 12-10-2018 Vc3S01_1693 45700cd29747436bc7ae16566e642fdb 272 Pfam PF12849 PBP superfamily domain 31 247 4.8E-31 T 12-10-2018 IPR024370 PBP domain Vc3S01_1693 45700cd29747436bc7ae16566e642fdb 272 Gene3D G3DSA:3.40.190.10 31 255 3.8E-98 T 12-10-2018 Vc3S01_1751 ec4b3e921d460707d936d2e112f1d94e 160 ProSitePatterns PS01117 MarR-type HTH domain signature. 84 118 - T 12-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site Vc3S01_1751 ec4b3e921d460707d936d2e112f1d94e 160 SMART SM00347 42 145 8.3E-30 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Vc3S01_1751 ec4b3e921d460707d936d2e112f1d94e 160 Pfam PF01047 MarR family 50 110 8.7E-15 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Vc3S01_1751 ec4b3e921d460707d936d2e112f1d94e 160 Gene3D G3DSA:1.10.10.10 1 159 3.0E-37 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_1751 ec4b3e921d460707d936d2e112f1d94e 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 85 3.5E-14 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Vc3S01_1751 ec4b3e921d460707d936d2e112f1d94e 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 135 155 3.5E-14 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Vc3S01_1751 ec4b3e921d460707d936d2e112f1d94e 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 101 3.5E-14 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Vc3S01_1751 ec4b3e921d460707d936d2e112f1d94e 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 105 121 3.5E-14 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Vc3S01_1751 ec4b3e921d460707d936d2e112f1d94e 160 SUPERFAMILY SSF46785 10 156 4.14E-34 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_0666 bddea5f891a5095dd19827d24c28b841 211 Pfam PF00196 Bacterial regulatory proteins, luxR family 153 207 4.6E-19 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_0666 bddea5f891a5095dd19827d24c28b841 211 SUPERFAMILY SSF46894 143 208 1.9E-19 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Vc3S01_0666 bddea5f891a5095dd19827d24c28b841 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 4.6E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_0666 bddea5f891a5095dd19827d24c28b841 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 4.6E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_0666 bddea5f891a5095dd19827d24c28b841 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 4.6E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_0666 bddea5f891a5095dd19827d24c28b841 211 Gene3D G3DSA:1.10.10.10 151 210 1.3E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_0666 bddea5f891a5095dd19827d24c28b841 211 SMART SM00421 150 207 6.8E-20 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_0666 bddea5f891a5095dd19827d24c28b841 211 Gene3D G3DSA:3.40.50.2300 10 137 1.3E-6 T 12-10-2018 Vc3S01_0212 f026108f34fe0dc977360d985f52dcac 202 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 5.7E-22 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Vc3S01_0212 f026108f34fe0dc977360d985f52dcac 202 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 5.7E-22 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Vc3S01_0212 f026108f34fe0dc977360d985f52dcac 202 PRINTS PR01703 Manganese superoxide dismutase signature 68 81 5.7E-22 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Vc3S01_0212 f026108f34fe0dc977360d985f52dcac 202 PRINTS PR01703 Manganese superoxide dismutase signature 161 173 5.7E-22 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Vc3S01_0212 f026108f34fe0dc977360d985f52dcac 202 PRINTS PR01703 Manganese superoxide dismutase signature 121 129 5.7E-22 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Vc3S01_0212 f026108f34fe0dc977360d985f52dcac 202 SUPERFAMILY SSF54719 84 200 1.83E-42 T 12-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Vc3S01_0212 f026108f34fe0dc977360d985f52dcac 202 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 163 170 - T 12-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Vc3S01_0212 f026108f34fe0dc977360d985f52dcac 202 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 92 195 1.1E-39 T 12-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Vc3S01_0212 f026108f34fe0dc977360d985f52dcac 202 SUPERFAMILY SSF46609 1 90 2.36E-29 T 12-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Vc3S01_0212 f026108f34fe0dc977360d985f52dcac 202 Gene3D G3DSA:1.10.287.990 20 83 6.1E-23 T 12-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Vc3S01_0212 f026108f34fe0dc977360d985f52dcac 202 Gene3D G3DSA:2.40.500.20 84 200 3.3E-47 T 12-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Vc3S01_0212 f026108f34fe0dc977360d985f52dcac 202 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 85 9.9E-26 T 12-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Vc3S01_0212 f026108f34fe0dc977360d985f52dcac 202 PIRSF PIRSF000349 1 202 7.5E-79 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Vc3S01_A0915 314dd1d768815e2dfd29aa20c380526e 548 SUPERFAMILY SSF54373 208 305 2.59E-32 T 12-10-2018 Vc3S01_A0915 314dd1d768815e2dfd29aa20c380526e 548 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 2.0E-6 T 12-10-2018 Vc3S01_A0915 314dd1d768815e2dfd29aa20c380526e 548 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 176 191 2.0E-6 T 12-10-2018 Vc3S01_A0915 314dd1d768815e2dfd29aa20c380526e 548 SUPERFAMILY SSF51905 1 447 4.12E-53 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_A0915 314dd1d768815e2dfd29aa20c380526e 548 Gene3D G3DSA:3.50.50.60 2 381 5.6E-184 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_A0915 314dd1d768815e2dfd29aa20c380526e 548 Gene3D G3DSA:3.30.9.90 75 449 5.6E-184 T 12-10-2018 Vc3S01_A0915 314dd1d768815e2dfd29aa20c380526e 548 SUPERFAMILY SSF54862 449 548 6.62E-26 T 12-10-2018 Vc3S01_A0915 314dd1d768815e2dfd29aa20c380526e 548 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 445 546 5.3E-47 T 12-10-2018 Vc3S01_A0915 314dd1d768815e2dfd29aa20c380526e 548 Gene3D G3DSA:3.30.70.20 450 543 1.1E-35 T 12-10-2018 Vc3S01_A0915 314dd1d768815e2dfd29aa20c380526e 548 Pfam PF13450 NAD(P)-binding Rossmann-like domain 7 53 4.6E-7 T 12-10-2018 Vc3S01_A0833 ac8ba1ab05ed1d4232bd3b89f9b6c0d9 434 SUPERFAMILY SSF160964 130 187 3.4E-8 T 12-10-2018 Vc3S01_A0833 ac8ba1ab05ed1d4232bd3b89f9b6c0d9 434 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 219 418 3.5E-23 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Vc3S01_A0833 ac8ba1ab05ed1d4232bd3b89f9b6c0d9 434 Gene3D G3DSA:1.10.3720.10 178 433 1.4E-65 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_A0833 ac8ba1ab05ed1d4232bd3b89f9b6c0d9 434 SUPERFAMILY SSF161098 182 418 2.75E-55 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_2987 3f5ec82e15d7cff131b11000d760b727 163 Gene3D G3DSA:2.40.160.20 13 163 2.2E-15 T 12-10-2018 Vc3S01_2987 3f5ec82e15d7cff131b11000d760b727 163 SUPERFAMILY SSF56925 16 163 1.57E-18 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel Vc3S01_2987 3f5ec82e15d7cff131b11000d760b727 163 Pfam PF13505 Outer membrane protein beta-barrel domain 4 163 1.3E-16 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel Vc3S01_2779 84dd876b8a870ed4cd8661c1d01cf744 437 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 9 434 8.5E-133 T 12-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Vc3S01_2779 84dd876b8a870ed4cd8661c1d01cf744 437 Gene3D G3DSA:3.90.190.20 300 433 2.5E-39 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Vc3S01_2779 84dd876b8a870ed4cd8661c1d01cf744 437 Gene3D G3DSA:3.40.1190.10 97 299 3.0E-68 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Vc3S01_2779 84dd876b8a870ed4cd8661c1d01cf744 437 SUPERFAMILY SSF53623 98 297 9.81E-55 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Vc3S01_2779 84dd876b8a870ed4cd8661c1d01cf744 437 SUPERFAMILY SSF51984 9 97 3.53E-17 T 12-10-2018 Vc3S01_2779 84dd876b8a870ed4cd8661c1d01cf744 437 Pfam PF02875 Mur ligase family, glutamate ligase domain 302 355 7.6E-7 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Vc3S01_2779 84dd876b8a870ed4cd8661c1d01cf744 437 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 8 436 33.337 T 12-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Vc3S01_2779 84dd876b8a870ed4cd8661c1d01cf744 437 Pfam PF08245 Mur ligase middle domain 113 279 1.9E-31 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Vc3S01_2779 84dd876b8a870ed4cd8661c1d01cf744 437 Gene3D G3DSA:3.40.50.720 5 96 1.5E-20 T 12-10-2018 Vc3S01_2779 84dd876b8a870ed4cd8661c1d01cf744 437 SUPERFAMILY SSF53244 299 436 7.78E-43 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Vc3S01_3098 8b24011b3a60df4be4c40258af292d7f 211 Pfam PF02036 SCP-2 sterol transfer family 15 111 2.2E-23 T 12-10-2018 IPR003033 SCP2 sterol-binding domain Vc3S01_3098 8b24011b3a60df4be4c40258af292d7f 211 SUPERFAMILY SSF55718 13 117 2.17E-10 T 12-10-2018 IPR036527 SCP2 sterol-binding domain superfamily Vc3S01_3098 8b24011b3a60df4be4c40258af292d7f 211 Gene3D G3DSA:3.30.1050.10 7 117 5.1E-6 T 12-10-2018 IPR036527 SCP2 sterol-binding domain superfamily Vc3S01_2946 90fcac8271ada7fd624bffc782c26e3b 335 SMART SM00354 1 71 2.4E-31 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Vc3S01_2946 90fcac8271ada7fd624bffc782c26e3b 335 Gene3D G3DSA:3.40.50.2300 56 306 2.9E-80 T 12-10-2018 Vc3S01_2946 90fcac8271ada7fd624bffc782c26e3b 335 Gene3D G3DSA:1.10.260.40 1 55 5.7E-26 T 12-10-2018 Vc3S01_2946 90fcac8271ada7fd624bffc782c26e3b 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 8.0E-20 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Vc3S01_2946 90fcac8271ada7fd624bffc782c26e3b 335 SUPERFAMILY SSF53822 60 334 1.96E-89 T 12-10-2018 IPR028082 Periplasmic binding protein-like I Vc3S01_2946 90fcac8271ada7fd624bffc782c26e3b 335 Gene3D G3DSA:3.40.50.2300 160 289 2.9E-80 T 12-10-2018 Vc3S01_2946 90fcac8271ada7fd624bffc782c26e3b 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 12-10-2018 Vc3S01_2946 90fcac8271ada7fd624bffc782c26e3b 335 SUPERFAMILY SSF47413 1 59 3.47E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Vc3S01_2946 90fcac8271ada7fd624bffc782c26e3b 335 Pfam PF13377 Periplasmic binding protein-like domain 168 328 5.3E-41 T 12-10-2018 Vc3S01_2369 28f88100845de6be5b80d76c76d887e7 220 SUPERFAMILY SSF63848 113 218 4.18E-30 T 12-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 Vc3S01_2369 28f88100845de6be5b80d76c76d887e7 220 Gene3D G3DSA:3.30.750.120 2 112 1.3E-33 T 12-10-2018 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily Vc3S01_2369 28f88100845de6be5b80d76c76d887e7 220 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 1 102 3.5E-31 T 12-10-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 Vc3S01_2369 28f88100845de6be5b80d76c76d887e7 220 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 115 215 3.3E-32 T 12-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 Vc3S01_2369 28f88100845de6be5b80d76c76d887e7 220 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 5 218 7.3E-78 T 12-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 Vc3S01_2369 28f88100845de6be5b80d76c76d887e7 220 Gene3D G3DSA:2.160.20.70 113 220 4.5E-31 T 12-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 Vc3S01_2369 28f88100845de6be5b80d76c76d887e7 220 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 4 219 28.12 T 12-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 Vc3S01_A0010 226620e6a1bd08c183664b318a805082 641 SMART SM00387 355 471 2.9E-39 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_A0010 226620e6a1bd08c183664b318a805082 641 Pfam PF00072 Response regulator receiver domain 511 622 2.8E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A0010 226620e6a1bd08c183664b318a805082 641 SUPERFAMILY SSF55874 297 472 5.89E-48 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_A0010 226620e6a1bd08c183664b318a805082 641 SUPERFAMILY SSF52172 508 634 4.41E-37 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_A0010 226620e6a1bd08c183664b318a805082 641 SMART SM00448 509 623 9.1E-33 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A0010 226620e6a1bd08c183664b318a805082 641 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 355 470 1.9E-31 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_A0010 226620e6a1bd08c183664b318a805082 641 Gene3D G3DSA:1.10.287.130 209 306 4.3E-29 T 12-10-2018 Vc3S01_A0010 226620e6a1bd08c183664b318a805082 641 SUPERFAMILY SSF47384 229 309 9.02E-22 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Vc3S01_A0010 226620e6a1bd08c183664b318a805082 641 Gene3D G3DSA:3.40.50.2300 502 627 3.2E-41 T 12-10-2018 Vc3S01_A0010 226620e6a1bd08c183664b318a805082 641 SMART SM00388 243 308 7.0E-24 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_A0010 226620e6a1bd08c183664b318a805082 641 Pfam PF17149 Periplasmic sensor domain found in signal transduction proteins 40 145 6.4E-16 T 12-10-2018 IPR033414 Periplasmic sensor domain Vc3S01_A0010 226620e6a1bd08c183664b318a805082 641 Gene3D G3DSA:3.30.565.10 307 475 8.3E-52 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_A0010 226620e6a1bd08c183664b318a805082 641 Pfam PF00512 His Kinase A (phospho-acceptor) domain 244 308 1.6E-19 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_A0010 226620e6a1bd08c183664b318a805082 641 PRINTS PR00344 Bacterial sensor protein C-terminal signature 396 410 2.7E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_A0010 226620e6a1bd08c183664b318a805082 641 PRINTS PR00344 Bacterial sensor protein C-terminal signature 455 468 2.7E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_A0010 226620e6a1bd08c183664b318a805082 641 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 424 2.7E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_A0010 226620e6a1bd08c183664b318a805082 641 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 449 2.7E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_0131 b132d8dc60ba07d278c2b8151208165a 808 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 11 799 0.0 T 12-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 Vc3S01_0131 b132d8dc60ba07d278c2b8151208165a 808 Pfam PF01553 Acyltransferase 289 424 1.4E-23 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Vc3S01_0131 b132d8dc60ba07d278c2b8151208165a 808 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 13 807 31.5 T 12-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 Vc3S01_0131 b132d8dc60ba07d278c2b8151208165a 808 PIRSF PIRSF500064 2 808 0.0 T 12-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 Vc3S01_0131 b132d8dc60ba07d278c2b8151208165a 808 SUPERFAMILY SSF69593 240 488 1.09E-24 T 12-10-2018 Vc3S01_0131 b132d8dc60ba07d278c2b8151208165a 808 SMART SM00563 300 427 5.7E-28 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Vc3S01_0131 b132d8dc60ba07d278c2b8151208165a 808 PIRSF PIRSF000437 19 808 0.0 T 12-10-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 Vc3S01_A1659 c7e67b3aec398af7e003b5888a635ecf 418 Gene3D G3DSA:3.90.170.10 266 418 8.4E-50 T 12-10-2018 Vc3S01_A1659 c7e67b3aec398af7e003b5888a635ecf 418 SUPERFAMILY SSF52540 1 417 1.49E-120 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A1659 c7e67b3aec398af7e003b5888a635ecf 418 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 418 140.668 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Vc3S01_A1659 c7e67b3aec398af7e003b5888a635ecf 418 Pfam PF00709 Adenylosuccinate synthetase 4 416 2.3E-129 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Vc3S01_A1659 c7e67b3aec398af7e003b5888a635ecf 418 SMART SM00788 3 417 2.0E-173 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Vc3S01_A1659 c7e67b3aec398af7e003b5888a635ecf 418 Gene3D G3DSA:3.40.440.10 6 255 6.8E-72 T 12-10-2018 Vc3S01_A1659 c7e67b3aec398af7e003b5888a635ecf 418 Gene3D G3DSA:1.10.300.10 99 200 6.8E-72 T 12-10-2018 Vc3S01_1858 24b56e60790a83084b5c3076d0b356f0 292 Pfam PF03547 Membrane transport protein 144 284 6.1E-9 T 12-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 Vc3S01_1974 c9859da5b82f1db56ba4e323bfc391ec 219 Pfam PF00072 Response regulator receiver domain 3 112 1.2E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_1974 c9859da5b82f1db56ba4e323bfc391ec 219 Gene3D G3DSA:3.40.50.2300 1 122 1.3E-35 T 12-10-2018 Vc3S01_1974 c9859da5b82f1db56ba4e323bfc391ec 219 SUPERFAMILY SSF46894 119 217 1.05E-26 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Vc3S01_1974 c9859da5b82f1db56ba4e323bfc391ec 219 Gene3D G3DSA:1.10.10.10 123 219 3.2E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_1974 c9859da5b82f1db56ba4e323bfc391ec 219 SMART SM00862 145 216 4.2E-23 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Vc3S01_1974 c9859da5b82f1db56ba4e323bfc391ec 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 4.2E-22 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Vc3S01_1974 c9859da5b82f1db56ba4e323bfc391ec 219 SMART SM00448 1 112 7.0E-34 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_1974 c9859da5b82f1db56ba4e323bfc391ec 219 SUPERFAMILY SSF52172 1 118 9.39E-36 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_A0985 c8cff4f49e71085e66d27405865a64f8 232 Gene3D G3DSA:3.40.30.10 2 106 3.4E-14 T 12-10-2018 Vc3S01_A0985 c8cff4f49e71085e66d27405865a64f8 232 Pfam PF00043 Glutathione S-transferase, C-terminal domain 122 207 1.9E-7 T 12-10-2018 IPR004046 Glutathione S-transferase, C-terminal Vc3S01_A0985 c8cff4f49e71085e66d27405865a64f8 232 SUPERFAMILY SSF52833 12 108 5.12E-14 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Vc3S01_A0985 c8cff4f49e71085e66d27405865a64f8 232 Gene3D G3DSA:1.20.1050.10 107 226 7.2E-10 T 12-10-2018 Vc3S01_A0985 c8cff4f49e71085e66d27405865a64f8 232 SUPERFAMILY SSF47616 106 218 3.9E-15 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Vc3S01_A0985 c8cff4f49e71085e66d27405865a64f8 232 Pfam PF13417 Glutathione S-transferase, N-terminal domain 13 91 1.3E-11 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Vc3S01_0160 85bc52b98e9b9f4fce1ea6cc458be630 122 Gene3D G3DSA:1.20.5.710 2 51 1.4E-22 T 12-10-2018 Vc3S01_0160 85bc52b98e9b9f4fce1ea6cc458be630 122 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 56 122 9.1E-30 T 12-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_0160 85bc52b98e9b9f4fce1ea6cc458be630 122 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 122 24.304 T 12-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_0160 85bc52b98e9b9f4fce1ea6cc458be630 122 SUPERFAMILY SSF54736 52 122 2.62E-24 T 12-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Vc3S01_0160 85bc52b98e9b9f4fce1ea6cc458be630 122 SUPERFAMILY SSF48300 4 58 4.19E-15 T 12-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_0160 85bc52b98e9b9f4fce1ea6cc458be630 122 Gene3D G3DSA:3.30.1390.10 52 122 2.3E-30 T 12-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Vc3S01_0160 85bc52b98e9b9f4fce1ea6cc458be630 122 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 50 6.4E-16 T 12-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_0160 85bc52b98e9b9f4fce1ea6cc458be630 122 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 122 1.6E-46 T 12-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_0160 85bc52b98e9b9f4fce1ea6cc458be630 122 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 57 122 1.0E-28 T 12-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_2773 d0d5fb93c7499d60d913ba52de3c766f 415 Gene3D G3DSA:3.30.1330.20 221 327 1.0E-34 T 12-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 Vc3S01_2773 d0d5fb93c7499d60d913ba52de3c766f 415 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 12-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 Vc3S01_2773 d0d5fb93c7499d60d913ba52de3c766f 415 Pfam PF12327 FtsZ family, C-terminal domain 222 316 2.1E-36 T 12-10-2018 IPR024757 Cell division protein FtsZ, C-terminal Vc3S01_2773 d0d5fb93c7499d60d913ba52de3c766f 415 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 173 1.7E-39 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Vc3S01_2773 d0d5fb93c7499d60d913ba52de3c766f 415 SUPERFAMILY SSF52490 13 208 2.49E-69 T 12-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 Vc3S01_2773 d0d5fb93c7499d60d913ba52de3c766f 415 SMART SM00864 13 205 3.6E-112 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Vc3S01_2773 d0d5fb93c7499d60d913ba52de3c766f 415 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 402 38.143 T 12-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 Vc3S01_2773 d0d5fb93c7499d60d913ba52de3c766f 415 SUPERFAMILY SSF55307 204 320 6.87E-43 T 12-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 Vc3S01_2773 d0d5fb93c7499d60d913ba52de3c766f 415 Gene3D G3DSA:3.40.50.1440 5 220 5.7E-80 T 12-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 Vc3S01_2773 d0d5fb93c7499d60d913ba52de3c766f 415 PRINTS PR00423 Cell division protein FtsZ signature 189 211 6.4E-52 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Vc3S01_2773 d0d5fb93c7499d60d913ba52de3c766f 415 PRINTS PR00423 Cell division protein FtsZ signature 126 147 6.4E-52 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Vc3S01_2773 d0d5fb93c7499d60d913ba52de3c766f 415 PRINTS PR00423 Cell division protein FtsZ signature 212 233 6.4E-52 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Vc3S01_2773 d0d5fb93c7499d60d913ba52de3c766f 415 PRINTS PR00423 Cell division protein FtsZ signature 98 118 6.4E-52 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Vc3S01_2773 d0d5fb93c7499d60d913ba52de3c766f 415 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 7 328 3.8E-136 T 12-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 Vc3S01_2773 d0d5fb93c7499d60d913ba52de3c766f 415 SMART SM00865 207 325 1.9E-56 T 12-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 Vc3S01_2773 d0d5fb93c7499d60d913ba52de3c766f 415 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 12-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 Vc3S01_2012 b0278bda6e96bb80f930127186d27166 527 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 162 312 6.5E-23 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain Vc3S01_2012 b0278bda6e96bb80f930127186d27166 527 Pfam PF12793 Sugar transport-related sRNA regulator N-term 6 116 2.0E-26 T 12-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain Vc3S01_2012 b0278bda6e96bb80f930127186d27166 527 SUPERFAMILY SSF53850 118 525 1.23E-49 T 12-10-2018 Vc3S01_2012 b0278bda6e96bb80f930127186d27166 527 Gene3D G3DSA:3.40.190.10 105 314 5.4E-33 T 12-10-2018 Vc3S01_A0331 9600e34d01315465eff3286d294cef92 339 Hamap MF_00354 Isopentenyl-diphosphate delta-isomerase [fni]. 4 338 38.028 T 12-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 Vc3S01_A0331 9600e34d01315465eff3286d294cef92 339 SUPERFAMILY SSF51395 26 338 4.53E-73 T 12-10-2018 Vc3S01_A0331 9600e34d01315465eff3286d294cef92 339 Pfam PF01070 FMN-dependent dehydrogenase 111 335 2.3E-18 T 12-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 Vc3S01_A0331 9600e34d01315465eff3286d294cef92 339 Pfam PF01070 FMN-dependent dehydrogenase 17 103 3.0E-8 T 12-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 Vc3S01_A0331 9600e34d01315465eff3286d294cef92 339 PIRSF PIRSF003314 1 339 4.4E-117 T 12-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 Vc3S01_A0331 9600e34d01315465eff3286d294cef92 339 TIGRFAM TIGR02151 IPP_isom_2: isopentenyl-diphosphate delta-isomerase, type 2 6 337 1.2E-114 T 12-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 Vc3S01_A0331 9600e34d01315465eff3286d294cef92 339 Gene3D G3DSA:3.20.20.70 3 339 3.8E-114 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_A0430 e0e9f196708ea8fb8f4cd663d945922c 284 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 257 268 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Vc3S01_A0430 e0e9f196708ea8fb8f4cd663d945922c 284 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 225 236 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Vc3S01_A0430 e0e9f196708ea8fb8f4cd663d945922c 284 Gene3D G3DSA:3.30.70.20 220 272 5.1E-7 T 12-10-2018 Vc3S01_A0430 e0e9f196708ea8fb8f4cd663d945922c 284 TIGRFAM TIGR02163 napH_: ferredoxin-type protein, NapH/MauN family 25 275 1.6E-110 T 12-10-2018 IPR011886 Ferredoxin-type protein, NapH/MauN family Vc3S01_A0430 e0e9f196708ea8fb8f4cd663d945922c 284 SUPERFAMILY SSF54862 96 277 2.75E-19 T 12-10-2018 Vc3S01_A0430 e0e9f196708ea8fb8f4cd663d945922c 284 Pfam PF12801 4Fe-4S binding domain 174 206 1.6E-4 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Vc3S01_A0430 e0e9f196708ea8fb8f4cd663d945922c 284 Pfam PF12801 4Fe-4S binding domain 82 127 7.2E-13 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Vc3S01_A0430 e0e9f196708ea8fb8f4cd663d945922c 284 Pfam PF13187 4Fe-4S dicluster domain 224 270 2.7E-6 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Vc3S01_A0447 2b7ad3c0ec499a92d46a18fc0add7778 471 Gene3D G3DSA:1.10.579.10 293 471 6.6E-80 T 12-10-2018 Vc3S01_A0447 2b7ad3c0ec499a92d46a18fc0add7778 471 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 325 337 - T 12-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal Vc3S01_A0447 2b7ad3c0ec499a92d46a18fc0add7778 471 SUPERFAMILY SSF52425 2 181 1.44E-47 T 12-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 Vc3S01_A0447 2b7ad3c0ec499a92d46a18fc0add7778 471 Gene3D G3DSA:1.25.40.80 133 286 1.6E-72 T 12-10-2018 Vc3S01_A0447 2b7ad3c0ec499a92d46a18fc0add7778 471 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 345 364 - T 12-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal Vc3S01_A0447 2b7ad3c0ec499a92d46a18fc0add7778 471 Gene3D G3DSA:3.40.50.620 3 204 1.6E-72 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Vc3S01_A0447 2b7ad3c0ec499a92d46a18fc0add7778 471 Pfam PF00875 DNA photolyase 3 169 6.1E-44 T 12-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 Vc3S01_A0447 2b7ad3c0ec499a92d46a18fc0add7778 471 PRINTS PR00147 DNA photolyase signature 325 341 7.7E-30 T 12-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 Vc3S01_A0447 2b7ad3c0ec499a92d46a18fc0add7778 471 PRINTS PR00147 DNA photolyase signature 384 398 7.7E-30 T 12-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 Vc3S01_A0447 2b7ad3c0ec499a92d46a18fc0add7778 471 PRINTS PR00147 DNA photolyase signature 345 363 7.7E-30 T 12-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 Vc3S01_A0447 2b7ad3c0ec499a92d46a18fc0add7778 471 PRINTS PR00147 DNA photolyase signature 142 158 7.7E-30 T 12-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 Vc3S01_A0447 2b7ad3c0ec499a92d46a18fc0add7778 471 SUPERFAMILY SSF48173 199 470 2.35E-104 T 12-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 Vc3S01_A0447 2b7ad3c0ec499a92d46a18fc0add7778 471 Pfam PF03441 FAD binding domain of DNA photolyase 275 467 8.8E-80 T 12-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 Vc3S01_0136 e6dc19494c6404b55125fb04ecc0adfb 213 Gene3D G3DSA:1.10.10.60 4 55 2.0E-23 T 12-10-2018 Vc3S01_0136 e6dc19494c6404b55125fb04ecc0adfb 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 61 1.1E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Vc3S01_0136 e6dc19494c6404b55125fb04ecc0adfb 213 SUPERFAMILY SSF46689 4 80 1.99E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_0136 e6dc19494c6404b55125fb04ecc0adfb 213 Gene3D G3DSA:1.10.357.10 56 210 7.3E-37 T 12-10-2018 Vc3S01_0136 e6dc19494c6404b55125fb04ecc0adfb 213 ProSitePatterns PS01081 TetR-type HTH domain signature. 31 61 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Vc3S01_A0120 87b0f636c0cbb2be76c0561b16a4de8b 363 SMART SM00267 202 363 4.3E-34 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A0120 87b0f636c0cbb2be76c0561b16a4de8b 363 Gene3D G3DSA:3.30.70.270 210 363 3.5E-39 T 12-10-2018 Vc3S01_A0120 87b0f636c0cbb2be76c0561b16a4de8b 363 SUPERFAMILY SSF55073 219 361 5.18E-37 T 12-10-2018 IPR029787 Nucleotide cyclase Vc3S01_A0120 87b0f636c0cbb2be76c0561b16a4de8b 363 Pfam PF00990 Diguanylate cyclase, GGDEF domain 215 361 2.1E-36 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A0120 87b0f636c0cbb2be76c0561b16a4de8b 363 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 213 360 1.4E-33 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_0632 ec5beaf60d5b22434c87e29c0a8b02ec 314 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 251 308 1.3E-15 T 12-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 Vc3S01_0632 ec5beaf60d5b22434c87e29c0a8b02ec 314 SUPERFAMILY SSF88697 250 310 4.57E-12 T 12-10-2018 IPR015947 PUA-like superfamily Vc3S01_0632 ec5beaf60d5b22434c87e29c0a8b02ec 314 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 32 179 1.1E-56 T 12-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 Vc3S01_0632 ec5beaf60d5b22434c87e29c0a8b02ec 314 Gene3D G3DSA:2.30.130.10 249 311 7.6E-22 T 12-10-2018 IPR036974 PUA domain superfamily GO:0003723 Vc3S01_0632 ec5beaf60d5b22434c87e29c0a8b02ec 314 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 180 247 3.0E-24 T 12-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 Vc3S01_0632 ec5beaf60d5b22434c87e29c0a8b02ec 314 Gene3D G3DSA:3.30.2350.10 1 248 2.3E-95 T 12-10-2018 Vc3S01_0632 ec5beaf60d5b22434c87e29c0a8b02ec 314 SUPERFAMILY SSF55120 9 247 1.27E-83 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Vc3S01_0632 ec5beaf60d5b22434c87e29c0a8b02ec 314 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 10 218 9.7E-87 T 12-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 Vc3S01_0632 ec5beaf60d5b22434c87e29c0a8b02ec 314 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 10 308 19.085 T 12-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 Vc3S01_1550 22ebe1e369254327e2325df4fc82b7f1 482 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 4 469 2.0E-232 T 12-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Vc3S01_1550 22ebe1e369254327e2325df4fc82b7f1 482 PIRSF PIRSF000109 1 477 2.5E-239 T 12-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Vc3S01_1550 22ebe1e369254327e2325df4fc82b7f1 482 Gene3D G3DSA:3.40.50.720 1 180 8.9E-56 T 12-10-2018 Vc3S01_1550 22ebe1e369254327e2325df4fc82b7f1 482 SUPERFAMILY SSF48179 177 472 7.48E-126 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Vc3S01_1550 22ebe1e369254327e2325df4fc82b7f1 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 168 196 3.9E-85 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Vc3S01_1550 22ebe1e369254327e2325df4fc82b7f1 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 249 276 3.9E-85 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Vc3S01_1550 22ebe1e369254327e2325df4fc82b7f1 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 3.9E-85 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Vc3S01_1550 22ebe1e369254327e2325df4fc82b7f1 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 3 26 3.9E-85 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Vc3S01_1550 22ebe1e369254327e2325df4fc82b7f1 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 3.9E-85 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Vc3S01_1550 22ebe1e369254327e2325df4fc82b7f1 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 356 378 3.9E-85 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Vc3S01_1550 22ebe1e369254327e2325df4fc82b7f1 482 Gene3D G3DSA:1.20.5.320 435 482 9.4E-25 T 12-10-2018 Vc3S01_1550 22ebe1e369254327e2325df4fc82b7f1 482 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 169 1.2E-50 T 12-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 Vc3S01_1550 22ebe1e369254327e2325df4fc82b7f1 482 SMART SM01350 179 469 1.0E-213 T 12-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Vc3S01_1550 22ebe1e369254327e2325df4fc82b7f1 482 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 179 468 7.4E-126 T 12-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Vc3S01_1550 22ebe1e369254327e2325df4fc82b7f1 482 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 253 265 - T 12-10-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Vc3S01_1550 22ebe1e369254327e2325df4fc82b7f1 482 SUPERFAMILY SSF51735 4 174 9.14E-56 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_1550 22ebe1e369254327e2325df4fc82b7f1 482 Gene3D G3DSA:1.10.1040.10 181 434 4.5E-102 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Vc3S01_A0346 8a3025410e7bf6007f5685208f34c642 479 SUPERFAMILY SSF53383 6 468 3.19E-106 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Vc3S01_A0346 8a3025410e7bf6007f5685208f34c642 479 Gene3D G3DSA:3.40.640.10 102 350 5.8E-91 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Vc3S01_A0346 8a3025410e7bf6007f5685208f34c642 479 Gene3D G3DSA:3.90.1150.170 35 463 5.8E-91 T 12-10-2018 Vc3S01_A0346 8a3025410e7bf6007f5685208f34c642 479 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 42 394 1.6E-46 T 12-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 Vc3S01_1029 5d7f9cb09329cd7a757b2e664ddf3b3c 441 PRINTS PR00173 Glutamate-aspartate symporter signature 20 40 1.5E-6 T 12-10-2018 Vc3S01_1029 5d7f9cb09329cd7a757b2e664ddf3b3c 441 PRINTS PR00173 Glutamate-aspartate symporter signature 374 393 1.5E-6 T 12-10-2018 Vc3S01_1029 5d7f9cb09329cd7a757b2e664ddf3b3c 441 Pfam PF03553 Na+/H+ antiporter family 150 435 1.5E-75 T 12-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 Vc3S01_1029 5d7f9cb09329cd7a757b2e664ddf3b3c 441 Pfam PF13726 Na+-H+ antiporter family 2 88 1.8E-35 T 12-10-2018 IPR032813 Putative Na+/H+ antiporter, N-terminal Vc3S01_0924 0e8a945fc66288205ce8e3094f3a37ee 181 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 10 177 2.7E-72 T 12-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 Vc3S01_0924 0e8a945fc66288205ce8e3094f3a37ee 181 Gene3D G3DSA:3.40.50.2020 1 181 7.5E-66 T 12-10-2018 Vc3S01_0924 0e8a945fc66288205ce8e3094f3a37ee 181 SUPERFAMILY SSF53271 12 178 5.92E-52 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like Vc3S01_0924 0e8a945fc66288205ce8e3094f3a37ee 181 Pfam PF00156 Phosphoribosyl transferase domain 30 154 1.7E-15 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Vc3S01_0924 0e8a945fc66288205ce8e3094f3a37ee 181 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 9 178 38.009 T 12-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 Vc3S01_A1682 869160c3d57132570fbb7208a94f85c2 284 Pfam PF00990 Diguanylate cyclase, GGDEF domain 135 282 1.0E-36 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A1682 869160c3d57132570fbb7208a94f85c2 284 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 130 282 4.2E-34 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A1682 869160c3d57132570fbb7208a94f85c2 284 SMART SM00267 122 283 5.8E-41 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A1682 869160c3d57132570fbb7208a94f85c2 284 Gene3D G3DSA:3.30.70.270 126 284 3.6E-42 T 12-10-2018 Vc3S01_A1682 869160c3d57132570fbb7208a94f85c2 284 SUPERFAMILY SSF55073 138 282 6.91E-39 T 12-10-2018 IPR029787 Nucleotide cyclase Vc3S01_0051 fc0c0c0d1f9b8d1e9f390ee5c30c8e03 460 SUPERFAMILY SSF49503 163 280 1.03E-15 T 12-10-2018 IPR008972 Cupredoxin Vc3S01_0051 fc0c0c0d1f9b8d1e9f390ee5c30c8e03 460 ProSitePatterns PS00080 Multicopper oxidases signature 2. 442 453 - T 12-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 Vc3S01_0051 fc0c0c0d1f9b8d1e9f390ee5c30c8e03 460 Pfam PF07731 Multicopper oxidase 364 459 3.6E-26 T 12-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 Vc3S01_0051 fc0c0c0d1f9b8d1e9f390ee5c30c8e03 460 Gene3D G3DSA:2.60.40.420 12 152 1.5E-45 T 12-10-2018 IPR008972 Cupredoxin Vc3S01_0051 fc0c0c0d1f9b8d1e9f390ee5c30c8e03 460 SUPERFAMILY SSF49503 33 155 7.57E-39 T 12-10-2018 IPR008972 Cupredoxin Vc3S01_0051 fc0c0c0d1f9b8d1e9f390ee5c30c8e03 460 SUPERFAMILY SSF49503 307 459 2.29E-34 T 12-10-2018 IPR008972 Cupredoxin Vc3S01_0051 fc0c0c0d1f9b8d1e9f390ee5c30c8e03 460 Gene3D G3DSA:2.60.40.420 153 289 6.1E-22 T 12-10-2018 IPR008972 Cupredoxin Vc3S01_0051 fc0c0c0d1f9b8d1e9f390ee5c30c8e03 460 Gene3D G3DSA:2.60.40.420 308 460 7.1E-37 T 12-10-2018 IPR008972 Cupredoxin Vc3S01_0051 fc0c0c0d1f9b8d1e9f390ee5c30c8e03 460 Pfam PF00394 Multicopper oxidase 196 280 2.5E-8 T 12-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 Vc3S01_0051 fc0c0c0d1f9b8d1e9f390ee5c30c8e03 460 Pfam PF07732 Multicopper oxidase 45 156 1.3E-38 T 12-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 Vc3S01_A1869 b910c7cd24017296c6012bff670216eb 155 Pfam PF04314 Copper chaperone PCu(A)C 31 135 9.5E-37 T 12-10-2018 IPR007410 Copper chaperone PCuAC Vc3S01_A1869 b910c7cd24017296c6012bff670216eb 155 Gene3D G3DSA:2.60.40.1890 33 148 7.3E-38 T 12-10-2018 IPR036182 Copper chaperone PCuAC superfamily Vc3S01_A1869 b910c7cd24017296c6012bff670216eb 155 SUPERFAMILY SSF110087 5 145 4.97E-44 T 12-10-2018 IPR036182 Copper chaperone PCuAC superfamily Vc3S01_1430 ca2afd83694c2f2ab5720fc07c8e14b3 228 SUPERFAMILY SSF48150 39 184 3.14E-40 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Vc3S01_1430 ca2afd83694c2f2ab5720fc07c8e14b3 228 Gene3D G3DSA:1.10.340.30 37 163 6.3E-19 T 12-10-2018 Vc3S01_1430 ca2afd83694c2f2ab5720fc07c8e14b3 228 Pfam PF03352 Methyladenine glycosylase 42 136 2.4E-15 T 12-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 Vc3S01_A1080 b3d1dfeecc30b91e05f5f8b70ad17c59 568 Pfam PF12793 Sugar transport-related sRNA regulator N-term 5 119 6.1E-37 T 12-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain Vc3S01_A1080 b3d1dfeecc30b91e05f5f8b70ad17c59 568 SUPERFAMILY SSF53850 117 559 8.32E-59 T 12-10-2018 Vc3S01_A1080 b3d1dfeecc30b91e05f5f8b70ad17c59 568 Gene3D G3DSA:3.40.190.10 122 323 3.7E-39 T 12-10-2018 Vc3S01_A1080 b3d1dfeecc30b91e05f5f8b70ad17c59 568 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 164 307 2.7E-20 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain Vc3S01_0938 d999d3d2de5b5639454e44f1bcb65daf 563 Gene3D G3DSA:3.30.70.100 458 550 9.4E-27 T 12-10-2018 Vc3S01_0938 d999d3d2de5b5639454e44f1bcb65daf 563 SUPERFAMILY SSF82861 304 390 7.19E-14 T 12-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 Vc3S01_0938 d999d3d2de5b5639454e44f1bcb65daf 563 Pfam PF00924 Mechanosensitive ion channel 355 546 1.2E-54 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 Vc3S01_0938 d999d3d2de5b5639454e44f1bcb65daf 563 Gene3D G3DSA:2.30.30.60 407 455 2.7E-18 T 12-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily Vc3S01_0938 d999d3d2de5b5639454e44f1bcb65daf 563 SUPERFAMILY SSF82689 460 556 7.72E-32 T 12-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 Vc3S01_0938 d999d3d2de5b5639454e44f1bcb65daf 563 SUPERFAMILY SSF50182 391 457 2.26E-18 T 12-10-2018 IPR010920 LSM domain superfamily Vc3S01_0757 2ed2c88ebb650da7c52b05adf76553ed 641 Gene3D G3DSA:3.40.50.300 203 397 3.2E-44 T 12-10-2018 Vc3S01_0757 2ed2c88ebb650da7c52b05adf76553ed 641 Gene3D G3DSA:1.10.10.10 498 639 7.9E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_0757 2ed2c88ebb650da7c52b05adf76553ed 641 SUPERFAMILY SSF52540 60 338 5.57E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0757 2ed2c88ebb650da7c52b05adf76553ed 641 SMART SM00490 245 326 2.4E-27 T 12-10-2018 IPR001650 Helicase, C-terminal Vc3S01_0757 2ed2c88ebb650da7c52b05adf76553ed 641 SMART SM00487 15 211 3.2E-26 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Vc3S01_0757 2ed2c88ebb650da7c52b05adf76553ed 641 Pfam PF00270 DEAD/DEAH box helicase 21 181 1.5E-16 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Vc3S01_0757 2ed2c88ebb650da7c52b05adf76553ed 641 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 9 348 6.1E-114 T 12-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 Vc3S01_0757 2ed2c88ebb650da7c52b05adf76553ed 641 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 134 143 - T 12-10-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site Vc3S01_0757 2ed2c88ebb650da7c52b05adf76553ed 641 Pfam PF16124 RecQ zinc-binding 512 559 4.3E-9 T 12-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain Vc3S01_0757 2ed2c88ebb650da7c52b05adf76553ed 641 Pfam PF00271 Helicase conserved C-terminal domain 231 325 4.0E-18 T 12-10-2018 IPR001650 Helicase, C-terminal Vc3S01_0757 2ed2c88ebb650da7c52b05adf76553ed 641 Gene3D G3DSA:3.40.50.300 1 201 5.7E-69 T 12-10-2018 Vc3S01_A1940 b7191b19f0ecae117d12f770fa3547df 244 SMART SM00530 8 72 4.2E-5 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Vc3S01_A1940 b7191b19f0ecae117d12f770fa3547df 244 SUPERFAMILY SSF47413 3 73 4.5E-10 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Vc3S01_A1940 b7191b19f0ecae117d12f770fa3547df 244 Gene3D G3DSA:1.10.260.40 1 74 7.5E-13 T 12-10-2018 Vc3S01_A1940 b7191b19f0ecae117d12f770fa3547df 244 Pfam PF13560 Helix-turn-helix domain 5 72 6.5E-8 T 12-10-2018 Vc3S01_2129 564ea46e0199701411f26e8548d2b696 245 Pfam PF00795 Carbon-nitrogen hydrolase 3 235 2.1E-11 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Vc3S01_2129 564ea46e0199701411f26e8548d2b696 245 Gene3D G3DSA:3.60.110.10 3 239 4.4E-27 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Vc3S01_2129 564ea46e0199701411f26e8548d2b696 245 SUPERFAMILY SSF56317 4 237 2.09E-30 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Vc3S01_1048 ed541a9b45c53139fcbe2263b05fbed0 467 SMART SM00382 167 310 5.1E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_1048 ed541a9b45c53139fcbe2263b05fbed0 467 Gene3D G3DSA:3.40.50.2300 2 137 6.9E-33 T 12-10-2018 Vc3S01_1048 ed541a9b45c53139fcbe2263b05fbed0 467 Gene3D G3DSA:1.10.10.60 412 456 2.8E-9 T 12-10-2018 Vc3S01_1048 ed541a9b45c53139fcbe2263b05fbed0 467 Pfam PF02954 Bacterial regulatory protein, Fis family 418 458 1.6E-12 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Vc3S01_1048 ed541a9b45c53139fcbe2263b05fbed0 467 SUPERFAMILY SSF52540 147 390 1.46E-69 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_1048 ed541a9b45c53139fcbe2263b05fbed0 467 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 233 248 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Vc3S01_1048 ed541a9b45c53139fcbe2263b05fbed0 467 Gene3D G3DSA:1.10.8.60 319 398 2.5E-23 T 12-10-2018 Vc3S01_1048 ed541a9b45c53139fcbe2263b05fbed0 467 SMART SM00448 11 122 1.5E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_1048 ed541a9b45c53139fcbe2263b05fbed0 467 Pfam PF00072 Response regulator receiver domain 14 122 1.2E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_1048 ed541a9b45c53139fcbe2263b05fbed0 467 Pfam PF00158 Sigma-54 interaction domain 148 313 3.1E-69 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Vc3S01_1048 ed541a9b45c53139fcbe2263b05fbed0 467 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 360 369 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Vc3S01_1048 ed541a9b45c53139fcbe2263b05fbed0 467 SUPERFAMILY SSF46689 360 457 5.97E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_1048 ed541a9b45c53139fcbe2263b05fbed0 467 SUPERFAMILY SSF52172 12 191 1.57E-41 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_1048 ed541a9b45c53139fcbe2263b05fbed0 467 Gene3D G3DSA:3.40.50.300 138 318 2.1E-65 T 12-10-2018 Vc3S01_A0948 18bb9f960891a5388268404ea065fa53 305 Pfam PF01738 Dienelactone hydrolase family 92 301 3.0E-46 T 12-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 Vc3S01_A0948 18bb9f960891a5388268404ea065fa53 305 Gene3D G3DSA:3.40.50.1820 64 302 4.8E-59 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_A0948 18bb9f960891a5388268404ea065fa53 305 SUPERFAMILY SSF53474 79 302 6.01E-42 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_A0528 75664933fa53738be3d86b1436fee5e0 271 SUPERFAMILY SSF52540 7 210 8.99E-6 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A0528 75664933fa53738be3d86b1436fee5e0 271 Pfam PF10364 Putative capsular polysaccharide synthesis protein 120 255 4.0E-50 T 12-10-2018 IPR018831 Uncharacterised protein family NKWYS Vc3S01_0095 488348cac8200ec0dea86dcf863dc0f7 276 SUPERFAMILY SSF54506 2 274 4.71E-54 T 12-10-2018 Vc3S01_0095 488348cac8200ec0dea86dcf863dc0f7 276 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 12-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Vc3S01_0095 488348cac8200ec0dea86dcf863dc0f7 276 Pfam PF01678 Diaminopimelate epimerase 154 269 2.0E-30 T 12-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Vc3S01_0095 488348cac8200ec0dea86dcf863dc0f7 276 Pfam PF01678 Diaminopimelate epimerase 5 125 2.8E-34 T 12-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Vc3S01_0095 488348cac8200ec0dea86dcf863dc0f7 276 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 274 6.7E-101 T 12-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Vc3S01_0095 488348cac8200ec0dea86dcf863dc0f7 276 Gene3D G3DSA:3.10.310.10 5 272 4.5E-107 T 12-10-2018 Vc3S01_0095 488348cac8200ec0dea86dcf863dc0f7 276 Gene3D G3DSA:3.10.310.10 117 263 4.5E-107 T 12-10-2018 Vc3S01_0095 488348cac8200ec0dea86dcf863dc0f7 276 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 276 39.717 T 12-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Vc3S01_0800 b56501850a6e9ac4e825ea032a0e63b8 282 Gene3D G3DSA:3.60.10.10 60 282 6.9E-20 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Vc3S01_0800 b56501850a6e9ac4e825ea032a0e63b8 282 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 66 270 3.7E-6 T 12-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase Vc3S01_0800 b56501850a6e9ac4e825ea032a0e63b8 282 Hamap MF_01119 UPF0294 protein YafD [yafD]. 1 278 55.42 T 12-10-2018 IPR022958 Uncharacterised protein family UPF0294 Vc3S01_0800 b56501850a6e9ac4e825ea032a0e63b8 282 SUPERFAMILY SSF56219 61 277 1.96E-23 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Vc3S01_A0747 1ee5d7fa8c5c85aaae41b58d23b4dfd9 375 Gene3D G3DSA:1.10.287.470 93 166 1.2E-95 T 12-10-2018 Vc3S01_A0747 1ee5d7fa8c5c85aaae41b58d23b4dfd9 375 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 54 283 2.2E-14 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Vc3S01_A0747 1ee5d7fa8c5c85aaae41b58d23b4dfd9 375 Gene3D G3DSA:2.40.30.170 47 296 1.2E-95 T 12-10-2018 Vc3S01_A0747 1ee5d7fa8c5c85aaae41b58d23b4dfd9 375 SUPERFAMILY SSF111369 49 290 1.83E-61 T 12-10-2018 Vc3S01_A0747 1ee5d7fa8c5c85aaae41b58d23b4dfd9 375 Gene3D G3DSA:2.40.50.100 58 201 1.2E-95 T 12-10-2018 Vc3S01_A0747 1ee5d7fa8c5c85aaae41b58d23b4dfd9 375 Gene3D G3DSA:2.40.420.20 297 365 1.2E-95 T 12-10-2018 Vc3S01_A0747 1ee5d7fa8c5c85aaae41b58d23b4dfd9 375 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 34 368 3.3E-81 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Vc3S01_A0920 57e5c0bb24cd76ee5615a9c2ee2c0f7f 364 Pfam PF00676 Dehydrogenase E1 component 36 328 1.7E-74 T 12-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 Vc3S01_A0920 57e5c0bb24cd76ee5615a9c2ee2c0f7f 364 TIGRFAM TIGR03181 PDH_E1_alph_x: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 8 350 1.5E-134 T 12-10-2018 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 Vc3S01_A0920 57e5c0bb24cd76ee5615a9c2ee2c0f7f 364 Gene3D G3DSA:3.40.50.970 1 351 2.3E-101 T 12-10-2018 Vc3S01_A0920 57e5c0bb24cd76ee5615a9c2ee2c0f7f 364 SUPERFAMILY SSF52518 21 357 2.32E-91 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold Vc3S01_1607 46deb5f0dbc6e2394e5b15863ccc4cf3 438 Gene3D G3DSA:1.20.1600.10 23 431 8.3E-80 T 12-10-2018 Vc3S01_1607 46deb5f0dbc6e2394e5b15863ccc4cf3 438 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 23 431 8.4E-118 T 12-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 Vc3S01_1607 46deb5f0dbc6e2394e5b15863ccc4cf3 438 SUPERFAMILY SSF56954 3 421 5.23E-89 T 12-10-2018 Vc3S01_1607 46deb5f0dbc6e2394e5b15863ccc4cf3 438 Pfam PF02321 Outer membrane efflux protein 235 418 8.3E-25 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Vc3S01_1607 46deb5f0dbc6e2394e5b15863ccc4cf3 438 Pfam PF02321 Outer membrane efflux protein 25 212 2.8E-28 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Vc3S01_A1445 b662c2d06292b20ac3660ff93aac85f9 334 SMART SM00448 3 115 3.8E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A1445 b662c2d06292b20ac3660ff93aac85f9 334 SUPERFAMILY SSF103039 140 329 1.01E-37 T 12-10-2018 IPR028976 CheC-like superfamily Vc3S01_A1445 b662c2d06292b20ac3660ff93aac85f9 334 Gene3D G3DSA:3.40.50.2300 2 126 8.8E-29 T 12-10-2018 Vc3S01_A1445 b662c2d06292b20ac3660ff93aac85f9 334 Pfam PF00072 Response regulator receiver domain 5 115 7.2E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A1445 b662c2d06292b20ac3660ff93aac85f9 334 Gene3D G3DSA:3.40.1550.10 139 328 3.5E-30 T 12-10-2018 IPR028976 CheC-like superfamily Vc3S01_A1445 b662c2d06292b20ac3660ff93aac85f9 334 SUPERFAMILY SSF52172 4 120 3.56E-29 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_0690 8b71d8878964bee9b616d9a34b2d5df5 1032 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 42 204 1.4E-49 T 12-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Vc3S01_0690 8b71d8878964bee9b616d9a34b2d5df5 1032 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 321 605 9.8E-114 T 12-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 Vc3S01_0690 8b71d8878964bee9b616d9a34b2d5df5 1032 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 371 396 - T 12-10-2018 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 Vc3S01_0690 8b71d8878964bee9b616d9a34b2d5df5 1032 Pfam PF02929 Beta galactosidase small chain 731 998 4.8E-71 T 12-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Vc3S01_0690 8b71d8878964bee9b616d9a34b2d5df5 1032 SMART SM01038 728 999 3.4E-129 T 12-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Vc3S01_0690 8b71d8878964bee9b616d9a34b2d5df5 1032 Gene3D G3DSA:2.60.40.10 208 319 3.3E-27 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_0690 8b71d8878964bee9b616d9a34b2d5df5 1032 SUPERFAMILY SSF49785 2 206 4.25E-62 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily Vc3S01_0690 8b71d8878964bee9b616d9a34b2d5df5 1032 Gene3D G3DSA:3.20.20.80 320 600 1.5E-101 T 12-10-2018 Vc3S01_0690 8b71d8878964bee9b616d9a34b2d5df5 1032 Gene3D G3DSA:2.60.120.260 1 207 4.9E-74 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily Vc3S01_0690 8b71d8878964bee9b616d9a34b2d5df5 1032 Gene3D G3DSA:2.60.40.10 601 702 3.1E-16 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_0690 8b71d8878964bee9b616d9a34b2d5df5 1032 SUPERFAMILY SSF49303 608 704 2.81E-21 T 12-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily Vc3S01_0690 8b71d8878964bee9b616d9a34b2d5df5 1032 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 436 450 - T 12-10-2018 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 Vc3S01_0690 8b71d8878964bee9b616d9a34b2d5df5 1032 Pfam PF16353 Domain of unknown function(DUF4981) 615 700 2.8E-14 T 12-10-2018 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Vc3S01_0690 8b71d8878964bee9b616d9a34b2d5df5 1032 SUPERFAMILY SSF51445 321 599 3.33E-85 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily Vc3S01_0690 8b71d8878964bee9b616d9a34b2d5df5 1032 SUPERFAMILY SSF74650 714 1001 5.02E-88 T 12-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Vc3S01_0690 8b71d8878964bee9b616d9a34b2d5df5 1032 Pfam PF00703 Glycosyl hydrolases family 2 209 319 8.1E-20 T 12-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 Vc3S01_0690 8b71d8878964bee9b616d9a34b2d5df5 1032 PRINTS PR00132 Glycosyl hydrolase family 2 signature 330 344 7.1E-32 T 12-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 Vc3S01_0690 8b71d8878964bee9b616d9a34b2d5df5 1032 PRINTS PR00132 Glycosyl hydrolase family 2 signature 361 379 7.1E-32 T 12-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 Vc3S01_0690 8b71d8878964bee9b616d9a34b2d5df5 1032 PRINTS PR00132 Glycosyl hydrolase family 2 signature 135 150 7.1E-32 T 12-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 Vc3S01_0690 8b71d8878964bee9b616d9a34b2d5df5 1032 PRINTS PR00132 Glycosyl hydrolase family 2 signature 507 522 7.1E-32 T 12-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 Vc3S01_0690 8b71d8878964bee9b616d9a34b2d5df5 1032 PRINTS PR00132 Glycosyl hydrolase family 2 signature 436 451 7.1E-32 T 12-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 Vc3S01_0690 8b71d8878964bee9b616d9a34b2d5df5 1032 SUPERFAMILY SSF49303 209 319 1.3E-25 T 12-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily Vc3S01_0690 8b71d8878964bee9b616d9a34b2d5df5 1032 Gene3D G3DSA:2.70.98.10 733 1004 2.0E-84 T 12-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 Vc3S01_0802 094f2a798697b97b40c166e70f5e3213 528 Pfam PF01464 Transglycosylase SLT domain 127 228 5.4E-23 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 Vc3S01_0802 094f2a798697b97b40c166e70f5e3213 528 Pfam PF01476 LysM domain 346 388 3.1E-12 T 12-10-2018 IPR018392 LysM domain Vc3S01_0802 094f2a798697b97b40c166e70f5e3213 528 Pfam PF01476 LysM domain 420 463 1.1E-11 T 12-10-2018 IPR018392 LysM domain Vc3S01_0802 094f2a798697b97b40c166e70f5e3213 528 Pfam PF01476 LysM domain 477 519 5.5E-11 T 12-10-2018 IPR018392 LysM domain Vc3S01_0802 094f2a798697b97b40c166e70f5e3213 528 SUPERFAMILY SSF53955 114 273 3.66E-42 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily Vc3S01_0802 094f2a798697b97b40c166e70f5e3213 528 SUPERFAMILY SSF54106 418 463 5.1E-11 T 12-10-2018 Vc3S01_0802 094f2a798697b97b40c166e70f5e3213 528 SMART SM00257 476 520 1.5E-9 T 12-10-2018 IPR018392 LysM domain Vc3S01_0802 094f2a798697b97b40c166e70f5e3213 528 SMART SM00257 345 388 4.5E-14 T 12-10-2018 IPR018392 LysM domain Vc3S01_0802 094f2a798697b97b40c166e70f5e3213 528 SMART SM00257 419 463 2.0E-13 T 12-10-2018 IPR018392 LysM domain Vc3S01_0802 094f2a798697b97b40c166e70f5e3213 528 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 135 163 - T 12-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 Vc3S01_0802 094f2a798697b97b40c166e70f5e3213 528 Gene3D G3DSA:1.10.530.10 111 262 1.1E-29 T 12-10-2018 Vc3S01_0802 094f2a798697b97b40c166e70f5e3213 528 Gene3D G3DSA:3.10.350.10 474 522 6.6E-13 T 12-10-2018 IPR036779 LysM domain superfamily Vc3S01_0802 094f2a798697b97b40c166e70f5e3213 528 SUPERFAMILY SSF54106 474 521 7.85E-10 T 12-10-2018 Vc3S01_0802 094f2a798697b97b40c166e70f5e3213 528 SUPERFAMILY SSF54106 345 388 3.4E-11 T 12-10-2018 Vc3S01_0802 094f2a798697b97b40c166e70f5e3213 528 Gene3D G3DSA:3.10.350.10 404 471 4.7E-15 T 12-10-2018 IPR036779 LysM domain superfamily Vc3S01_0802 094f2a798697b97b40c166e70f5e3213 528 Gene3D G3DSA:3.10.350.10 331 398 7.6E-16 T 12-10-2018 IPR036779 LysM domain superfamily Vc3S01_0732 7a314c525b92963cf1bc62cacb1241f3 269 Gene3D G3DSA:3.40.50.720 5 269 5.4E-110 T 12-10-2018 Vc3S01_0732 7a314c525b92963cf1bc62cacb1241f3 269 SUPERFAMILY SSF69572 9 267 1.7E-64 T 12-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 Vc3S01_0732 7a314c525b92963cf1bc62cacb1241f3 269 Pfam PF00899 ThiF family 23 198 4.2E-38 T 12-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 Vc3S01_0947 39590f619b8cb3459d85227469595e1b 322 SUPERFAMILY SSF53590 1 289 8.37E-91 T 12-10-2018 IPR036452 Ribonucleoside hydrolase-like Vc3S01_0947 39590f619b8cb3459d85227469595e1b 322 Gene3D G3DSA:3.90.245.10 1 319 8.5E-104 T 12-10-2018 IPR036452 Ribonucleoside hydrolase-like Vc3S01_0947 39590f619b8cb3459d85227469595e1b 322 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 3 299 1.3E-81 T 12-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain Vc3S01_3008 e4bb6030cdb6c1393052a1629f342086 56 SUPERFAMILY SSF57829 3 54 7.32E-19 T 12-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 Vc3S01_3008 e4bb6030cdb6c1393052a1629f342086 56 Gene3D G3DSA:2.20.28.120 1 56 1.2E-28 T 12-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_3008 e4bb6030cdb6c1393052a1629f342086 56 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 56 1.4E-26 T 12-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_3008 e4bb6030cdb6c1393052a1629f342086 56 ProSitePatterns PS00582 Ribosomal protein L33 signature. 22 41 - T 12-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_3008 e4bb6030cdb6c1393052a1629f342086 56 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 6 54 14.671 T 12-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_3008 e4bb6030cdb6c1393052a1629f342086 56 Pfam PF00471 Ribosomal protein L33 8 54 1.2E-16 T 12-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_A1419 4c5f7d5c02d29d9c84f30425ff0883b7 420 SUPERFAMILY SSF51556 56 364 9.36E-72 T 12-10-2018 IPR032466 Metal-dependent hydrolase Vc3S01_A1419 4c5f7d5c02d29d9c84f30425ff0883b7 420 Pfam PF01979 Amidohydrolase family 52 413 1.6E-34 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Vc3S01_A1419 4c5f7d5c02d29d9c84f30425ff0883b7 420 Gene3D G3DSA:3.20.20.140 57 372 1.7E-124 T 12-10-2018 Vc3S01_A1419 4c5f7d5c02d29d9c84f30425ff0883b7 420 SUPERFAMILY SSF51338 2 416 1.6E-18 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Vc3S01_A1419 4c5f7d5c02d29d9c84f30425ff0883b7 420 Gene3D G3DSA:2.30.40.10 7 414 1.7E-124 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Vc3S01_A0704 7a414734ab255bed4b40e917c601b995 364 Gene3D G3DSA:2.30.300.10 7 339 2.7E-121 T 12-10-2018 Vc3S01_A0704 7a414734ab255bed4b40e917c601b995 364 Gene3D G3DSA:3.55.50.10 96 180 2.7E-121 T 12-10-2018 Vc3S01_A0704 7a414734ab255bed4b40e917c601b995 364 Pfam PF05954 Phage late control gene D protein (GPD) 27 324 2.7E-15 T 12-10-2018 Vc3S01_A0704 7a414734ab255bed4b40e917c601b995 364 PIRSF PIRSF004440 1 363 1.5E-94 T 12-10-2018 IPR026276 Baseplate protein GpP Vc3S01_A0704 7a414734ab255bed4b40e917c601b995 364 SUPERFAMILY SSF69279 3 180 4.68E-57 T 12-10-2018 Vc3S01_A0704 7a414734ab255bed4b40e917c601b995 364 SUPERFAMILY SSF69279 183 346 3.57E-46 T 12-10-2018 Vc3S01_A0704 7a414734ab255bed4b40e917c601b995 364 Gene3D G3DSA:3.30.1920.10 204 279 2.7E-121 T 12-10-2018 IPR023399 Baseplate-like, two-layer sandwich fold Vc3S01_A0167 264df2fe423ce81d9b8b04bff534ac88 178 Gene3D G3DSA:1.25.40.10 78 178 1.0E-33 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_A0167 264df2fe423ce81d9b8b04bff534ac88 178 Pfam PF06041 Bacterial protein of unknown function (DUF924) 5 175 1.2E-64 T 12-10-2018 IPR010323 Protein of unknown function DUF924 Vc3S01_A0167 264df2fe423ce81d9b8b04bff534ac88 178 SUPERFAMILY SSF48452 2 174 9.48E-69 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_A0167 264df2fe423ce81d9b8b04bff534ac88 178 Gene3D G3DSA:1.20.58.320 1 77 1.1E-26 T 12-10-2018 Vc3S01_A0885 dc5e3f8d5bd3834d1a86a2da644b6030 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 47 72 5.2E-93 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A0885 dc5e3f8d5bd3834d1a86a2da644b6030 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 411 430 5.2E-93 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A0885 dc5e3f8d5bd3834d1a86a2da644b6030 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 324 339 5.2E-93 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A0885 dc5e3f8d5bd3834d1a86a2da644b6030 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 198 216 5.2E-93 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A0885 dc5e3f8d5bd3834d1a86a2da644b6030 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 383 401 5.2E-93 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A0885 dc5e3f8d5bd3834d1a86a2da644b6030 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 461 482 5.2E-93 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A0885 dc5e3f8d5bd3834d1a86a2da644b6030 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 278 299 5.2E-93 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A0885 dc5e3f8d5bd3834d1a86a2da644b6030 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 166 178 5.2E-93 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A0885 dc5e3f8d5bd3834d1a86a2da644b6030 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 227 246 5.2E-93 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A0885 dc5e3f8d5bd3834d1a86a2da644b6030 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 348 369 5.2E-93 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A0885 dc5e3f8d5bd3834d1a86a2da644b6030 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 97 120 5.2E-93 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A0885 dc5e3f8d5bd3834d1a86a2da644b6030 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 124 148 5.2E-93 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A0885 dc5e3f8d5bd3834d1a86a2da644b6030 678 Gene3D G3DSA:1.20.210.10 30 559 7.9E-183 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A0885 dc5e3f8d5bd3834d1a86a2da644b6030 678 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 2 648 0.0 T 12-10-2018 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 Vc3S01_A0885 dc5e3f8d5bd3834d1a86a2da644b6030 678 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 280 334 - T 12-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A0885 dc5e3f8d5bd3834d1a86a2da644b6030 678 SUPERFAMILY SSF81442 43 557 2.09E-174 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A0885 dc5e3f8d5bd3834d1a86a2da644b6030 678 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 57 502 3.0E-131 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_1599 ca56bbd9ac028be7037404202e626e15 226 PIRSF PIRSF000370 4 226 2.1E-68 T 12-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 Vc3S01_1599 ca56bbd9ac028be7037404202e626e15 226 SUPERFAMILY SSF102114 31 118 1.7E-5 T 12-10-2018 Vc3S01_1599 ca56bbd9ac028be7037404202e626e15 226 TIGRFAM TIGR04322 rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 12 225 3.4E-109 T 12-10-2018 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 Vc3S01_1599 ca56bbd9ac028be7037404202e626e15 226 Pfam PF04055 Radical SAM superfamily 30 126 1.9E-7 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Vc3S01_1599 ca56bbd9ac028be7037404202e626e15 226 Pfam PF13394 4Fe-4S single cluster domain 27 129 9.2E-10 T 12-10-2018 Vc3S01_1599 ca56bbd9ac028be7037404202e626e15 226 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 6 226 33.841 T 12-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 Vc3S01_1599 ca56bbd9ac028be7037404202e626e15 226 Gene3D G3DSA:3.20.20.70 5 226 4.2E-52 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_0442 16942cc3e2806968f0fc67eaeb3842e5 502 SUPERFAMILY SSF52949 1 184 4.71E-52 T 12-10-2018 Vc3S01_0442 16942cc3e2806968f0fc67eaeb3842e5 502 Gene3D G3DSA:3.40.220.10 1 159 1.5E-59 T 12-10-2018 Vc3S01_0442 16942cc3e2806968f0fc67eaeb3842e5 502 Gene3D G3DSA:3.40.630.10 181 497 1.5E-140 T 12-10-2018 Vc3S01_0442 16942cc3e2806968f0fc67eaeb3842e5 502 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 187 489 1.6E-123 T 12-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 Vc3S01_0442 16942cc3e2806968f0fc67eaeb3842e5 502 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 349 356 - T 12-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 Vc3S01_0442 16942cc3e2806968f0fc67eaeb3842e5 502 PRINTS PR00481 Cytosol aminopeptidase signature 345 365 4.8E-55 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Vc3S01_0442 16942cc3e2806968f0fc67eaeb3842e5 502 PRINTS PR00481 Cytosol aminopeptidase signature 286 307 4.8E-55 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Vc3S01_0442 16942cc3e2806968f0fc67eaeb3842e5 502 PRINTS PR00481 Cytosol aminopeptidase signature 323 344 4.8E-55 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Vc3S01_0442 16942cc3e2806968f0fc67eaeb3842e5 502 PRINTS PR00481 Cytosol aminopeptidase signature 264 281 4.8E-55 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Vc3S01_0442 16942cc3e2806968f0fc67eaeb3842e5 502 PRINTS PR00481 Cytosol aminopeptidase signature 373 388 4.8E-55 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Vc3S01_0442 16942cc3e2806968f0fc67eaeb3842e5 502 SUPERFAMILY SSF53187 179 496 1.95E-124 T 12-10-2018 Vc3S01_0442 16942cc3e2806968f0fc67eaeb3842e5 502 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 497 40.835 T 12-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 Vc3S01_0442 16942cc3e2806968f0fc67eaeb3842e5 502 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 6.6E-34 T 12-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 Vc3S01_0210 c6006b12023764fe9e23fb4e40df5359 172 Pfam PF04186 FxsA cytoplasmic membrane protein 7 114 9.3E-35 T 12-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 Vc3S01_A0427 2c8935bef9b5c9d1cfe490c7241ed250 325 SUPERFAMILY SSF56112 24 320 9.75E-25 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily Vc3S01_A0427 2c8935bef9b5c9d1cfe490c7241ed250 325 Pfam PF02958 Ecdysteroid kinase 65 143 3.6E-6 T 12-10-2018 IPR004119 Protein of unknown function DUF227 Vc3S01_A0427 2c8935bef9b5c9d1cfe490c7241ed250 325 Pfam PF02958 Ecdysteroid kinase 168 267 1.3E-10 T 12-10-2018 IPR004119 Protein of unknown function DUF227 Vc3S01_A0427 2c8935bef9b5c9d1cfe490c7241ed250 325 SMART SM00587 109 266 7.9E-5 T 12-10-2018 IPR015897 CHK kinase-like Vc3S01_A0427 2c8935bef9b5c9d1cfe490c7241ed250 325 Gene3D G3DSA:3.90.1200.10 134 296 2.2E-7 T 12-10-2018 Vc3S01_2883 55cbff50e86566ebbd9ffb9c47d20cf8 516 SUPERFAMILY SSF161098 24 245 2.88E-41 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_2883 55cbff50e86566ebbd9ffb9c47d20cf8 516 SUPERFAMILY SSF161098 266 509 6.41E-34 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_2883 55cbff50e86566ebbd9ffb9c47d20cf8 516 TIGRFAM TIGR01253 thiP: thiamine/thiamine pyrophosphate ABC transporter, permease protein 3 506 2.8E-160 T 12-10-2018 IPR005947 Thiamine ABC transporter, permease protein GO:0005215|GO:0015888|GO:0016021 Vc3S01_2883 55cbff50e86566ebbd9ffb9c47d20cf8 516 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 52 244 1.7E-8 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Vc3S01_2883 55cbff50e86566ebbd9ffb9c47d20cf8 516 Gene3D G3DSA:1.10.3720.10 1 249 2.6E-42 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_2883 55cbff50e86566ebbd9ffb9c47d20cf8 516 Gene3D G3DSA:1.10.3720.10 270 515 1.7E-29 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_A0769 2f73e15e308d4eb6e145f6a289c8f4fe 204 Pfam PF13419 Haloacid dehalogenase-like hydrolase 15 171 5.6E-17 T 12-10-2018 Vc3S01_A0769 2f73e15e308d4eb6e145f6a289c8f4fe 204 Gene3D G3DSA:1.10.260.80 24 75 3.4E-52 T 12-10-2018 Vc3S01_A0769 2f73e15e308d4eb6e145f6a289c8f4fe 204 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 83 165 5.6E-6 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Vc3S01_A0769 2f73e15e308d4eb6e145f6a289c8f4fe 204 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 13 172 2.1E-9 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Vc3S01_A0769 2f73e15e308d4eb6e145f6a289c8f4fe 204 Gene3D G3DSA:3.40.50.1000 12 184 3.4E-52 T 12-10-2018 IPR023214 HAD superfamily Vc3S01_A0769 2f73e15e308d4eb6e145f6a289c8f4fe 204 SUPERFAMILY SSF56784 10 198 1.02E-32 T 12-10-2018 IPR036412 HAD-like superfamily Vc3S01_3011 ac29404b2172103ddad86c2a9ea68676 557 Gene3D G3DSA:1.10.287.950 226 557 1.7E-70 T 12-10-2018 Vc3S01_3011 ac29404b2172103ddad86c2a9ea68676 557 SMART SM01049 44 133 7.2E-30 T 12-10-2018 IPR033480 Single Cache domain 2 Vc3S01_3011 ac29404b2172103ddad86c2a9ea68676 557 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 367 523 2.5E-39 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Vc3S01_3011 ac29404b2172103ddad86c2a9ea68676 557 Pfam PF00672 HAMP domain 229 276 1.8E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Vc3S01_3011 ac29404b2172103ddad86c2a9ea68676 557 SMART SM00283 295 556 2.7E-60 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Vc3S01_3011 ac29404b2172103ddad86c2a9ea68676 557 SMART SM00304 226 280 5.7E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Vc3S01_3011 ac29404b2172103ddad86c2a9ea68676 557 Pfam PF17200 Single Cache domain 2 47 189 5.1E-36 T 12-10-2018 IPR033480 Single Cache domain 2 Vc3S01_3011 ac29404b2172103ddad86c2a9ea68676 557 SUPERFAMILY SSF58104 248 557 1.96E-74 T 12-10-2018 Vc3S01_3011 ac29404b2172103ddad86c2a9ea68676 557 Gene3D G3DSA:3.30.450.20 38 183 1.7E-52 T 12-10-2018 Vc3S01_0828 7f26330a0b40e0a484bfda9cccc22f6a 339 Hamap MF_00924 Outer membrane protein assembly factor BamC [bamC]. 4 338 33.863 T 12-10-2018 IPR014524 Outer membrane protein assembly factor BamC Vc3S01_0828 7f26330a0b40e0a484bfda9cccc22f6a 339 Gene3D G3DSA:3.30.310.170 221 339 2.8E-41 T 12-10-2018 Vc3S01_0828 7f26330a0b40e0a484bfda9cccc22f6a 339 PIRSF PIRSF026343 4 339 1.5E-117 T 12-10-2018 IPR014524 Outer membrane protein assembly factor BamC Vc3S01_0828 7f26330a0b40e0a484bfda9cccc22f6a 339 Gene3D G3DSA:3.30.530.50 97 207 7.5E-13 T 12-10-2018 Vc3S01_0828 7f26330a0b40e0a484bfda9cccc22f6a 339 Pfam PF06804 NlpB/DapX lipoprotein 35 336 1.0E-104 T 12-10-2018 IPR010653 NlpB/DapX lipoprotein Vc3S01_2116 48948dc1b4d0259f77314ced506a65cb 504 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 83 425 3.2E-57 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain Vc3S01_2116 48948dc1b4d0259f77314ced506a65cb 504 Gene3D G3DSA:3.40.190.10 73 487 9.2E-84 T 12-10-2018 Vc3S01_2116 48948dc1b4d0259f77314ced506a65cb 504 PIRSF PIRSF002741 3 498 6.4E-59 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Vc3S01_2116 48948dc1b4d0259f77314ced506a65cb 504 Gene3D G3DSA:3.10.105.10 267 475 9.2E-84 T 12-10-2018 Vc3S01_2116 48948dc1b4d0259f77314ced506a65cb 504 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 87 108 - T 12-10-2018 IPR023765 Solute-binding protein family 5, conserved site Vc3S01_2116 48948dc1b4d0259f77314ced506a65cb 504 SUPERFAMILY SSF53850 34 491 1.1E-88 T 12-10-2018 Vc3S01_A1455 3d55cc53bfb02831c2b8403bfa7a08fd 411 SMART SM00852 184 321 1.2E-41 T 12-10-2018 IPR001453 MoaB/Mog domain Vc3S01_A1455 3d55cc53bfb02831c2b8403bfa7a08fd 411 Pfam PF00994 Probable molybdopterin binding domain 186 320 2.4E-25 T 12-10-2018 IPR001453 MoaB/Mog domain Vc3S01_A1455 3d55cc53bfb02831c2b8403bfa7a08fd 411 Pfam PF03453 MoeA N-terminal region (domain I and II) 11 171 2.7E-47 T 12-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Vc3S01_A1455 3d55cc53bfb02831c2b8403bfa7a08fd 411 Pfam PF03454 MoeA C-terminal region (domain IV) 336 406 6.5E-22 T 12-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Vc3S01_A1455 3d55cc53bfb02831c2b8403bfa7a08fd 411 SUPERFAMILY SSF63882 7 180 3.01E-56 T 12-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Vc3S01_A1455 3d55cc53bfb02831c2b8403bfa7a08fd 411 Gene3D G3DSA:3.40.980.10 179 331 6.9E-146 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily Vc3S01_A1455 3d55cc53bfb02831c2b8403bfa7a08fd 411 Gene3D G3DSA:2.170.190.11 53 145 6.9E-146 T 12-10-2018 Vc3S01_A1455 3d55cc53bfb02831c2b8403bfa7a08fd 411 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 180 317 3.0E-32 T 12-10-2018 IPR001453 MoaB/Mog domain Vc3S01_A1455 3d55cc53bfb02831c2b8403bfa7a08fd 411 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 257 290 - T 12-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 Vc3S01_A1455 3d55cc53bfb02831c2b8403bfa7a08fd 411 Gene3D G3DSA:2.40.340.10 332 401 6.9E-146 T 12-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Vc3S01_A1455 3d55cc53bfb02831c2b8403bfa7a08fd 411 Gene3D G3DSA:3.90.105.10 31 178 6.9E-146 T 12-10-2018 Vc3S01_A1455 3d55cc53bfb02831c2b8403bfa7a08fd 411 SUPERFAMILY SSF53218 181 327 1.03E-41 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily Vc3S01_A1455 3d55cc53bfb02831c2b8403bfa7a08fd 411 SUPERFAMILY SSF63867 332 410 2.49E-23 T 12-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Vc3S01_1034 1448d8ab72f769508ba157195a697932 213 PIRSF PIRSF001435 1 211 2.8E-49 T 12-10-2018 Vc3S01_1034 1448d8ab72f769508ba157195a697932 213 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 2.8E-18 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Vc3S01_1034 1448d8ab72f769508ba157195a697932 213 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 12-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 Vc3S01_1034 1448d8ab72f769508ba157195a697932 213 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 12-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 Vc3S01_1034 1448d8ab72f769508ba157195a697932 213 SMART SM00478 38 185 3.6E-54 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Vc3S01_1034 1448d8ab72f769508ba157195a697932 213 Gene3D G3DSA:1.10.340.30 21 132 6.2E-77 T 12-10-2018 Vc3S01_1034 1448d8ab72f769508ba157195a697932 213 Pfam PF00633 Helix-hairpin-helix motif 100 127 2.1E-7 T 12-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 Vc3S01_1034 1448d8ab72f769508ba157195a697932 213 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 7.7E-5 T 12-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 Vc3S01_1034 1448d8ab72f769508ba157195a697932 213 Hamap MF_00942 Endonuclease III [nth]. 1 209 37.576 T 12-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 Vc3S01_1034 1448d8ab72f769508ba157195a697932 213 SUPERFAMILY SSF48150 5 207 7.22E-70 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Vc3S01_1034 1448d8ab72f769508ba157195a697932 213 SMART SM00525 186 206 1.8E-5 T 12-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 Vc3S01_1034 1448d8ab72f769508ba157195a697932 213 Gene3D G3DSA:1.10.1670.10 11 203 6.2E-77 T 12-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 Vc3S01_1034 1448d8ab72f769508ba157195a697932 213 TIGRFAM TIGR01083 nth: endonuclease III 5 194 1.5E-87 T 12-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 Vc3S01_A1675 aa278ee95274430d5eee391538f946f2 360 Pfam PF13533 Biotin-lipoyl like 60 106 1.5E-13 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain Vc3S01_A1675 aa278ee95274430d5eee391538f946f2 360 Gene3D G3DSA:2.40.30.170 45 281 6.9E-59 T 12-10-2018 Vc3S01_A1675 aa278ee95274430d5eee391538f946f2 360 Gene3D G3DSA:2.40.50.100 60 206 6.9E-59 T 12-10-2018 Vc3S01_A1675 aa278ee95274430d5eee391538f946f2 360 SUPERFAMILY SSF111369 50 221 5.1E-21 T 12-10-2018 Vc3S01_A1675 aa278ee95274430d5eee391538f946f2 360 Gene3D G3DSA:2.40.420.20 38 350 6.9E-59 T 12-10-2018 Vc3S01_A1675 aa278ee95274430d5eee391538f946f2 360 Pfam PF13437 HlyD family secretion protein 171 263 4.4E-9 T 12-10-2018 Vc3S01_A1675 aa278ee95274430d5eee391538f946f2 360 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 37 350 7.4E-56 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Vc3S01_A1675 aa278ee95274430d5eee391538f946f2 360 Gene3D G3DSA:1.10.287.470 94 167 6.9E-59 T 12-10-2018 Vc3S01_2061 c5786a8ade2e89bcfa83d5a566324c99 205 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 9 194 4.0E-102 T 12-10-2018 Vc3S01_2061 c5786a8ade2e89bcfa83d5a566324c99 205 Pfam PF04356 Protein of unknown function (DUF489) 7 195 8.7E-77 T 12-10-2018 IPR007451 High frequency lysogenization protein HflD Vc3S01_2061 c5786a8ade2e89bcfa83d5a566324c99 205 SUPERFAMILY SSF101322 2 204 4.18E-80 T 12-10-2018 IPR035932 HflD-like superfamily Vc3S01_2061 c5786a8ade2e89bcfa83d5a566324c99 205 Gene3D G3DSA:1.10.3890.10 1 205 1.4E-77 T 12-10-2018 IPR035932 HflD-like superfamily Vc3S01_2061 c5786a8ade2e89bcfa83d5a566324c99 205 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 203 35.789 T 12-10-2018 IPR007451 High frequency lysogenization protein HflD Vc3S01_0262 23d16ce0044ddc8194f7eb3d890a8e93 247 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 4 243 1.3E-85 T 12-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 Vc3S01_0262 23d16ce0044ddc8194f7eb3d890a8e93 247 SUPERFAMILY SSF55315 3 77 2.12E-19 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like Vc3S01_0262 23d16ce0044ddc8194f7eb3d890a8e93 247 Pfam PF00588 SpoU rRNA Methylase family 97 237 1.9E-39 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 Vc3S01_0262 23d16ce0044ddc8194f7eb3d890a8e93 247 Gene3D G3DSA:3.40.1280.10 78 244 1.2E-63 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Vc3S01_0262 23d16ce0044ddc8194f7eb3d890a8e93 247 SUPERFAMILY SSF75217 69 244 1.37E-48 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases Vc3S01_0262 23d16ce0044ddc8194f7eb3d890a8e93 247 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 3 244 43.01 T 12-10-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB Vc3S01_0262 23d16ce0044ddc8194f7eb3d890a8e93 247 Gene3D G3DSA:3.30.1330.30 1 77 4.6E-26 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like Vc3S01_0262 23d16ce0044ddc8194f7eb3d890a8e93 247 SMART SM00967 5 81 3.0E-19 T 12-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 Vc3S01_0262 23d16ce0044ddc8194f7eb3d890a8e93 247 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 5 79 6.8E-19 T 12-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 Vc3S01_2907 261cd0bf25a9d5e2cf9177b323eb152f 296 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 122 155 - T 12-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Vc3S01_2907 261cd0bf25a9d5e2cf9177b323eb152f 296 Gene3D G3DSA:3.40.1010.10 41 157 8.0E-45 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Vc3S01_2907 261cd0bf25a9d5e2cf9177b323eb152f 296 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 42 275 1.8E-93 T 12-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Vc3S01_2907 261cd0bf25a9d5e2cf9177b323eb152f 296 SUPERFAMILY SSF53790 38 285 3.4E-79 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Vc3S01_2907 261cd0bf25a9d5e2cf9177b323eb152f 296 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 47 61 - T 12-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Vc3S01_2907 261cd0bf25a9d5e2cf9177b323eb152f 296 Gene3D G3DSA:3.30.950.10 158 295 8.3E-45 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Vc3S01_2907 261cd0bf25a9d5e2cf9177b323eb152f 296 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 44 253 2.8E-45 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Vc3S01_A0383 4b3cc6a68fb8bdfc62d4a1362e32f793 242 Gene3D G3DSA:2.60.40.10 158 238 2.1E-13 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_A0383 4b3cc6a68fb8bdfc62d4a1362e32f793 242 PRINTS PR00969 Pili chaperone signature 138 153 2.4E-15 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 Vc3S01_A0383 4b3cc6a68fb8bdfc62d4a1362e32f793 242 PRINTS PR00969 Pili chaperone signature 173 188 2.4E-15 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 Vc3S01_A0383 4b3cc6a68fb8bdfc62d4a1362e32f793 242 PRINTS PR00969 Pili chaperone signature 33 42 2.4E-15 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 Vc3S01_A0383 4b3cc6a68fb8bdfc62d4a1362e32f793 242 PRINTS PR00969 Pili chaperone signature 82 103 2.4E-15 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 Vc3S01_A0383 4b3cc6a68fb8bdfc62d4a1362e32f793 242 PRINTS PR00969 Pili chaperone signature 111 128 2.4E-15 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 Vc3S01_A0383 4b3cc6a68fb8bdfc62d4a1362e32f793 242 SUPERFAMILY SSF49584 150 239 3.92E-14 T 12-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily Vc3S01_A0383 4b3cc6a68fb8bdfc62d4a1362e32f793 242 SUPERFAMILY SSF49354 28 156 1.18E-24 T 12-10-2018 IPR008962 PapD-like superfamily Vc3S01_A0383 4b3cc6a68fb8bdfc62d4a1362e32f793 242 Gene3D G3DSA:2.60.40.10 35 157 2.2E-24 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_A0383 4b3cc6a68fb8bdfc62d4a1362e32f793 242 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 178 234 2.8E-5 T 12-10-2018 IPR016148 Pili assembly chaperone, C-terminal Vc3S01_A0383 4b3cc6a68fb8bdfc62d4a1362e32f793 242 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 33 156 5.0E-26 T 12-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 Vc3S01_2043 529667de8adf4500880b1d50988e74d6 164 SUPERFAMILY SSF50891 1 162 1.04E-58 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily Vc3S01_2043 529667de8adf4500880b1d50988e74d6 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 8.8E-12 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Vc3S01_2043 529667de8adf4500880b1d50988e74d6 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 8.8E-12 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Vc3S01_2043 529667de8adf4500880b1d50988e74d6 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 8.8E-12 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Vc3S01_2043 529667de8adf4500880b1d50988e74d6 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 12-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 Vc3S01_2043 529667de8adf4500880b1d50988e74d6 164 Gene3D G3DSA:2.40.100.10 1 164 2.9E-66 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily Vc3S01_2043 529667de8adf4500880b1d50988e74d6 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 2 160 1.9E-48 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Vc3S01_2043 529667de8adf4500880b1d50988e74d6 164 PIRSF PIRSF001467 1 163 1.1E-28 T 12-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 Vc3S01_A0052 1d650d31ab8a431a248e54b4bdc7b1ae 235 PIRSF PIRSF009467 12 235 4.4E-59 T 12-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 Vc3S01_A0052 1d650d31ab8a431a248e54b4bdc7b1ae 235 Hamap MF_01385 Urease accessory protein UreF [ureF]. 14 235 30.965 T 12-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 Vc3S01_A0052 1d650d31ab8a431a248e54b4bdc7b1ae 235 Pfam PF01730 UreF 46 193 3.0E-38 T 12-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 Vc3S01_A0052 1d650d31ab8a431a248e54b4bdc7b1ae 235 Gene3D G3DSA:1.10.4190.10 12 212 2.2E-51 T 12-10-2018 IPR038277 UreF domain superfamily Vc3S01_A0581 97f7c523c36b94d0cc0b6b7872ff776b 288 Gene3D G3DSA:3.40.190.290 91 278 1.9E-29 T 12-10-2018 Vc3S01_A0581 97f7c523c36b94d0cc0b6b7872ff776b 288 Gene3D G3DSA:1.10.10.10 2 89 1.2E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A0581 97f7c523c36b94d0cc0b6b7872ff776b 288 Pfam PF03466 LysR substrate binding domain 88 278 1.8E-18 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_A0581 97f7c523c36b94d0cc0b6b7872ff776b 288 SUPERFAMILY SSF46785 3 112 1.92E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A0581 97f7c523c36b94d0cc0b6b7872ff776b 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 2.1E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A0581 97f7c523c36b94d0cc0b6b7872ff776b 288 SUPERFAMILY SSF53850 92 282 2.53E-20 T 12-10-2018 Vc3S01_A1937 af569d8a3e9f47eb6711b62842518b81 251 PRINTS PR00969 Pili chaperone signature 130 145 4.9E-28 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 Vc3S01_A1937 af569d8a3e9f47eb6711b62842518b81 251 PRINTS PR00969 Pili chaperone signature 67 88 4.9E-28 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 Vc3S01_A1937 af569d8a3e9f47eb6711b62842518b81 251 PRINTS PR00969 Pili chaperone signature 97 114 4.9E-28 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 Vc3S01_A1937 af569d8a3e9f47eb6711b62842518b81 251 PRINTS PR00969 Pili chaperone signature 22 31 4.9E-28 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 Vc3S01_A1937 af569d8a3e9f47eb6711b62842518b81 251 PRINTS PR00969 Pili chaperone signature 169 184 4.9E-28 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 Vc3S01_A1937 af569d8a3e9f47eb6711b62842518b81 251 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 175 231 2.5E-12 T 12-10-2018 IPR016148 Pili assembly chaperone, C-terminal Vc3S01_A1937 af569d8a3e9f47eb6711b62842518b81 251 SUPERFAMILY SSF49354 16 148 1.49E-32 T 12-10-2018 IPR008962 PapD-like superfamily Vc3S01_A1937 af569d8a3e9f47eb6711b62842518b81 251 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 22 148 5.1E-31 T 12-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 Vc3S01_A1937 af569d8a3e9f47eb6711b62842518b81 251 SUPERFAMILY SSF49584 163 240 6.67E-16 T 12-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily Vc3S01_A1937 af569d8a3e9f47eb6711b62842518b81 251 Gene3D G3DSA:2.60.40.10 22 146 3.9E-33 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_A1937 af569d8a3e9f47eb6711b62842518b81 251 Gene3D G3DSA:2.60.40.10 153 244 8.0E-18 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_0629 6d2dfc3400839de2809dbe3c7d28c9f9 495 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 410 28.829 T 12-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 Vc3S01_0629 6d2dfc3400839de2809dbe3c7d28c9f9 495 SUPERFAMILY SSF47794 429 492 1.08E-16 T 12-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 Vc3S01_0629 6d2dfc3400839de2809dbe3c7d28c9f9 495 Pfam PF14520 Helix-hairpin-helix domain 370 412 0.0037 T 12-10-2018 Vc3S01_0629 6d2dfc3400839de2809dbe3c7d28c9f9 495 Pfam PF14520 Helix-hairpin-helix domain 432 486 2.1E-8 T 12-10-2018 Vc3S01_0629 6d2dfc3400839de2809dbe3c7d28c9f9 495 SUPERFAMILY SSF54814 201 278 9.81E-29 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Vc3S01_0629 6d2dfc3400839de2809dbe3c7d28c9f9 495 Gene3D G3DSA:2.40.50.140 135 198 7.3E-17 T 12-10-2018 Vc3S01_0629 6d2dfc3400839de2809dbe3c7d28c9f9 495 Pfam PF08529 NusA N-terminal domain 4 123 1.0E-36 T 12-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 Vc3S01_0629 6d2dfc3400839de2809dbe3c7d28c9f9 495 Pfam PF13184 NusA-like KH domain 230 297 3.1E-27 T 12-10-2018 IPR025249 KH domain, NusA-like GO:0003723 Vc3S01_0629 6d2dfc3400839de2809dbe3c7d28c9f9 495 SUPERFAMILY SSF54814 279 342 2.75E-15 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Vc3S01_0629 6d2dfc3400839de2809dbe3c7d28c9f9 495 Gene3D G3DSA:3.30.300.20 278 345 1.3E-24 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta Vc3S01_0629 6d2dfc3400839de2809dbe3c7d28c9f9 495 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 342 7.1E-126 T 12-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 Vc3S01_0629 6d2dfc3400839de2809dbe3c7d28c9f9 495 Gene3D G3DSA:1.10.150.20 352 421 3.6E-29 T 12-10-2018 Vc3S01_0629 6d2dfc3400839de2809dbe3c7d28c9f9 495 Gene3D G3DSA:3.30.1480.10 1 129 1.1E-44 T 12-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 Vc3S01_0629 6d2dfc3400839de2809dbe3c7d28c9f9 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 365 414 1.9E-22 T 12-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication Vc3S01_0629 6d2dfc3400839de2809dbe3c7d28c9f9 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 440 489 1.5E-18 T 12-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication Vc3S01_0629 6d2dfc3400839de2809dbe3c7d28c9f9 495 SUPERFAMILY SSF69705 1 126 1.15E-41 T 12-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 Vc3S01_0629 6d2dfc3400839de2809dbe3c7d28c9f9 495 Gene3D G3DSA:1.10.150.20 431 490 7.9E-25 T 12-10-2018 Vc3S01_0629 6d2dfc3400839de2809dbe3c7d28c9f9 495 SUPERFAMILY SSF50249 132 199 1.8E-16 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Vc3S01_0629 6d2dfc3400839de2809dbe3c7d28c9f9 495 Gene3D G3DSA:3.30.300.20 199 277 2.4E-30 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta Vc3S01_0629 6d2dfc3400839de2809dbe3c7d28c9f9 495 SUPERFAMILY SSF47794 356 415 8.79E-17 T 12-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 Vc3S01_0629 6d2dfc3400839de2809dbe3c7d28c9f9 495 SMART SM00316 133 198 1.1E-5 T 12-10-2018 IPR022967 RNA-binding domain, S1 Vc3S01_A0413 54bc7fa106f10eb8b5c5d9efe10e5574 239 SUPERFAMILY SSF51069 22 236 4.71E-75 T 12-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily Vc3S01_A0413 54bc7fa106f10eb8b5c5d9efe10e5574 239 Pfam PF00194 Eukaryotic-type carbonic anhydrase 22 237 6.3E-53 T 12-10-2018 IPR001148 Alpha carbonic anhydrase domain Vc3S01_A0413 54bc7fa106f10eb8b5c5d9efe10e5574 239 ProSitePatterns PS00162 Alpha-carbonic anhydrases signature. 109 125 - T 12-10-2018 IPR018338 Carbonic anhydrase, alpha-class, conserved site GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117|Reactome: R-HSA-1475029 Vc3S01_A0413 54bc7fa106f10eb8b5c5d9efe10e5574 239 SMART SM01057 23 239 5.8E-98 T 12-10-2018 IPR001148 Alpha carbonic anhydrase domain Vc3S01_A0413 54bc7fa106f10eb8b5c5d9efe10e5574 239 Gene3D G3DSA:3.10.200.10 22 237 2.6E-85 T 12-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily Vc3S01_A1401 693d4f1aa8b027b6c628d7ceda571a4e 787 Pfam PF00072 Response regulator receiver domain 519 629 6.9E-18 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A1401 693d4f1aa8b027b6c628d7ceda571a4e 787 PRINTS PR00344 Bacterial sensor protein C-terminal signature 478 491 7.6E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_A1401 693d4f1aa8b027b6c628d7ceda571a4e 787 PRINTS PR00344 Bacterial sensor protein C-terminal signature 454 472 7.6E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_A1401 693d4f1aa8b027b6c628d7ceda571a4e 787 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 433 7.6E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_A1401 693d4f1aa8b027b6c628d7ceda571a4e 787 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 447 7.6E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_A1401 693d4f1aa8b027b6c628d7ceda571a4e 787 SMART SM00388 269 334 1.5E-19 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_A1401 693d4f1aa8b027b6c628d7ceda571a4e 787 SUPERFAMILY SSF52172 516 641 1.39E-30 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_A1401 693d4f1aa8b027b6c628d7ceda571a4e 787 Gene3D G3DSA:3.30.565.10 335 497 2.6E-43 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_A1401 693d4f1aa8b027b6c628d7ceda571a4e 787 Pfam PF01627 Hpt domain 672 763 1.9E-7 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Vc3S01_A1401 693d4f1aa8b027b6c628d7ceda571a4e 787 Gene3D G3DSA:3.40.50.2300 498 636 2.1E-33 T 12-10-2018 Vc3S01_A1401 693d4f1aa8b027b6c628d7ceda571a4e 787 SUPERFAMILY SSF47226 613 761 2.49E-18 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 Vc3S01_A1401 693d4f1aa8b027b6c628d7ceda571a4e 787 SMART SM00448 517 629 6.1E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A1401 693d4f1aa8b027b6c628d7ceda571a4e 787 Gene3D G3DSA:1.20.120.160 668 776 5.0E-13 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 Vc3S01_A1401 693d4f1aa8b027b6c628d7ceda571a4e 787 SUPERFAMILY SSF47384 253 335 2.94E-20 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Vc3S01_A1401 693d4f1aa8b027b6c628d7ceda571a4e 787 Gene3D G3DSA:1.10.287.130 236 332 3.9E-27 T 12-10-2018 Vc3S01_A1401 693d4f1aa8b027b6c628d7ceda571a4e 787 SUPERFAMILY SSF55874 323 494 3.67E-43 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_A1401 693d4f1aa8b027b6c628d7ceda571a4e 787 SMART SM00387 381 494 4.8E-31 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_A1401 693d4f1aa8b027b6c628d7ceda571a4e 787 Pfam PF00512 His Kinase A (phospho-acceptor) domain 269 333 9.0E-16 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_A1401 693d4f1aa8b027b6c628d7ceda571a4e 787 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 382 491 4.7E-27 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_1058 d5c731d38861e272f2bb43332d5e6325 300 Gene3D G3DSA:1.10.3720.10 96 296 4.8E-21 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_1058 d5c731d38861e272f2bb43332d5e6325 300 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 24 69 2.2E-15 T 12-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Vc3S01_1058 d5c731d38861e272f2bb43332d5e6325 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 298 4.6E-27 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Vc3S01_1058 d5c731d38861e272f2bb43332d5e6325 300 SUPERFAMILY SSF161098 97 281 2.22E-27 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_A1942 829032ccf0d87326fd6dfdbdd320baf6 397 PIRSF PIRSF001480 2 397 1.5E-98 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Vc3S01_A1942 829032ccf0d87326fd6dfdbdd320baf6 397 Pfam PF01238 Phosphomannose isomerase type I 5 362 6.6E-83 T 12-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Vc3S01_A1942 829032ccf0d87326fd6dfdbdd320baf6 397 Gene3D G3DSA:1.10.441.10 151 308 2.9E-130 T 12-10-2018 Vc3S01_A1942 829032ccf0d87326fd6dfdbdd320baf6 397 Gene3D G3DSA:2.60.120.10 10 283 2.9E-130 T 12-10-2018 IPR014710 RmlC-like jelly roll fold Vc3S01_A1942 829032ccf0d87326fd6dfdbdd320baf6 397 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 3 390 1.2E-93 T 12-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Vc3S01_A1942 829032ccf0d87326fd6dfdbdd320baf6 397 Gene3D G3DSA:2.60.120.10 309 390 2.9E-130 T 12-10-2018 IPR014710 RmlC-like jelly roll fold Vc3S01_A1942 829032ccf0d87326fd6dfdbdd320baf6 397 SUPERFAMILY SSF51182 4 380 1.9E-93 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily Vc3S01_A1942 829032ccf0d87326fd6dfdbdd320baf6 397 ProSitePatterns PS00966 Phosphomannose isomerase type I signature 2. 263 288 - T 12-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Vc3S01_A1942 829032ccf0d87326fd6dfdbdd320baf6 397 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 127 135 - T 12-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Vc3S01_A1942 829032ccf0d87326fd6dfdbdd320baf6 397 PRINTS PR00714 Phosphomannose isomerase type I signature 8 26 6.5E-65 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Vc3S01_A1942 829032ccf0d87326fd6dfdbdd320baf6 397 PRINTS PR00714 Phosphomannose isomerase type I signature 228 243 6.5E-65 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Vc3S01_A1942 829032ccf0d87326fd6dfdbdd320baf6 397 PRINTS PR00714 Phosphomannose isomerase type I signature 36 51 6.5E-65 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Vc3S01_A1942 829032ccf0d87326fd6dfdbdd320baf6 397 PRINTS PR00714 Phosphomannose isomerase type I signature 127 150 6.5E-65 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Vc3S01_A1942 829032ccf0d87326fd6dfdbdd320baf6 397 PRINTS PR00714 Phosphomannose isomerase type I signature 282 301 6.5E-65 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Vc3S01_A1942 829032ccf0d87326fd6dfdbdd320baf6 397 PRINTS PR00714 Phosphomannose isomerase type I signature 244 263 6.5E-65 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Vc3S01_A1942 829032ccf0d87326fd6dfdbdd320baf6 397 PRINTS PR00714 Phosphomannose isomerase type I signature 82 103 6.5E-65 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Vc3S01_A1942 829032ccf0d87326fd6dfdbdd320baf6 397 PRINTS PR00714 Phosphomannose isomerase type I signature 263 282 6.5E-65 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Vc3S01_1786 b32fbd8560cb09971ce1d69bc15ffce6 497 SMART SM00495 447 496 8.3E-6 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 Vc3S01_1786 b32fbd8560cb09971ce1d69bc15ffce6 497 SUPERFAMILY SSF51055 448 495 5.1E-7 T 12-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 Vc3S01_1786 b32fbd8560cb09971ce1d69bc15ffce6 497 Gene3D G3DSA:2.70.50.50 27 216 2.3E-59 T 12-10-2018 Vc3S01_1786 b32fbd8560cb09971ce1d69bc15ffce6 497 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 27 211 7.2E-37 T 12-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal Vc3S01_1786 b32fbd8560cb09971ce1d69bc15ffce6 497 Gene3D G3DSA:2.10.10.20 446 494 9.0E-9 T 12-10-2018 Vc3S01_1786 b32fbd8560cb09971ce1d69bc15ffce6 497 SUPERFAMILY SSF81296 27 213 1.09E-47 T 12-10-2018 IPR014756 Immunoglobulin E-set Vc3S01_A1047 ecde99b3f00c451e384befa08c51c6e3 1053 SUPERFAMILY SSF51055 995 1052 1.57E-14 T 12-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 Vc3S01_A1047 ecde99b3f00c451e384befa08c51c6e3 1053 Gene3D G3DSA:2.60.40.10 97 188 2.0E-24 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_A1047 ecde99b3f00c451e384befa08c51c6e3 1053 SUPERFAMILY SSF54556 628 751 4.35E-15 T 12-10-2018 IPR029070 Chitinase insertion domain superfamily Vc3S01_A1047 ecde99b3f00c451e384befa08c51c6e3 1053 Pfam PF06483 Chitinase C 809 974 3.1E-72 T 12-10-2018 IPR009470 Chitinase, C-terminal KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 Vc3S01_A1047 ecde99b3f00c451e384befa08c51c6e3 1053 SMART SM00495 37 82 2.3E-14 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 Vc3S01_A1047 ecde99b3f00c451e384befa08c51c6e3 1053 SMART SM00495 1008 1050 7.5E-10 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 Vc3S01_A1047 ecde99b3f00c451e384befa08c51c6e3 1053 Gene3D G3DSA:3.20.20.80 675 817 1.2E-7 T 12-10-2018 Vc3S01_A1047 ecde99b3f00c451e384befa08c51c6e3 1053 Gene3D G3DSA:2.10.10.20 993 1052 2.2E-19 T 12-10-2018 Vc3S01_A1047 ecde99b3f00c451e384befa08c51c6e3 1053 Pfam PF14600 Cellulose-binding domain 998 1050 3.0E-16 T 12-10-2018 IPR032798 Endoglucanase Z, cellulose-binding domain KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 Vc3S01_A1047 ecde99b3f00c451e384befa08c51c6e3 1053 Gene3D G3DSA:2.10.10.20 16 87 1.4E-16 T 12-10-2018 Vc3S01_A1047 ecde99b3f00c451e384befa08c51c6e3 1053 SUPERFAMILY SSF51055 22 86 1.1E-17 T 12-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 Vc3S01_A1047 ecde99b3f00c451e384befa08c51c6e3 1053 SMART SM00636 321 781 1.1E-120 T 12-10-2018 IPR011583 Chitinase II GO:0008061 Vc3S01_A1047 ecde99b3f00c451e384befa08c51c6e3 1053 Gene3D G3DSA:3.20.20.80 305 649 8.4E-80 T 12-10-2018 Vc3S01_A1047 ecde99b3f00c451e384befa08c51c6e3 1053 Pfam PF00704 Glycosyl hydrolases family 18 322 781 5.7E-86 T 12-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 Vc3S01_A1047 ecde99b3f00c451e384befa08c51c6e3 1053 SUPERFAMILY SSF51445 315 785 1.2E-74 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily Vc3S01_A1047 ecde99b3f00c451e384befa08c51c6e3 1053 ProSitePatterns PS01095 Chitinases family 18 active site. 470 478 - T 12-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 Vc3S01_A1047 ecde99b3f00c451e384befa08c51c6e3 1053 Gene3D G3DSA:2.60.40.10 196 285 2.5E-20 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_2380 8dfb40e92f891c9b4ac9400c34df8edf 277 SUPERFAMILY SSF55021 4 59 1.79E-8 T 12-10-2018 Vc3S01_2380 8dfb40e92f891c9b4ac9400c34df8edf 277 Gene3D G3DSA:3.30.70.260 1 79 3.0E-15 T 12-10-2018 Vc3S01_2380 8dfb40e92f891c9b4ac9400c34df8edf 277 Pfam PF01842 ACT domain 5 66 2.6E-7 T 12-10-2018 IPR002912 ACT domain Vc3S01_2380 8dfb40e92f891c9b4ac9400c34df8edf 277 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 5 277 2.6E-123 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Vc3S01_2380 8dfb40e92f891c9b4ac9400c34df8edf 277 Gene3D G3DSA:3.40.50.170 81 277 9.4E-68 T 12-10-2018 Vc3S01_2380 8dfb40e92f891c9b4ac9400c34df8edf 277 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 1 277 45.332 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Vc3S01_2380 8dfb40e92f891c9b4ac9400c34df8edf 277 SUPERFAMILY SSF53328 82 276 1.57E-60 T 12-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Vc3S01_2380 8dfb40e92f891c9b4ac9400c34df8edf 277 PIRSF PIRSF036480 1 277 4.3E-112 T 12-10-2018 Vc3S01_2380 8dfb40e92f891c9b4ac9400c34df8edf 277 Pfam PF00551 Formyl transferase 82 259 1.1E-49 T 12-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Vc3S01_2380 8dfb40e92f891c9b4ac9400c34df8edf 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 229 251 9.7E-65 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Vc3S01_2380 8dfb40e92f891c9b4ac9400c34df8edf 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 83 105 9.7E-65 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Vc3S01_2380 8dfb40e92f891c9b4ac9400c34df8edf 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 105 132 9.7E-65 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Vc3S01_2380 8dfb40e92f891c9b4ac9400c34df8edf 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 251 276 9.7E-65 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Vc3S01_2380 8dfb40e92f891c9b4ac9400c34df8edf 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 6 32 9.7E-65 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Vc3S01_2380 8dfb40e92f891c9b4ac9400c34df8edf 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 38 50 9.7E-65 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Vc3S01_2423 3c626ed1b371d49b1188e0ec754ba7aa 634 Gene3D G3DSA:3.30.565.10 6 219 7.9E-75 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_2423 3c626ed1b371d49b1188e0ec754ba7aa 634 Gene3D G3DSA:3.30.230.80 237 409 1.4E-70 T 12-10-2018 Vc3S01_2423 3c626ed1b371d49b1188e0ec754ba7aa 634 PIRSF PIRSF002583 1 634 6.9E-211 T 12-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 Vc3S01_2423 3c626ed1b371d49b1188e0ec754ba7aa 634 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 30 39 - T 12-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 Vc3S01_2423 3c626ed1b371d49b1188e0ec754ba7aa 634 PRINTS PR00775 90kDa heat shock protein signature 195 213 2.7E-62 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Vc3S01_2423 3c626ed1b371d49b1188e0ec754ba7aa 634 PRINTS PR00775 90kDa heat shock protein signature 31 53 2.7E-62 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Vc3S01_2423 3c626ed1b371d49b1188e0ec754ba7aa 634 PRINTS PR00775 90kDa heat shock protein signature 98 115 2.7E-62 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Vc3S01_2423 3c626ed1b371d49b1188e0ec754ba7aa 634 PRINTS PR00775 90kDa heat shock protein signature 10 30 2.7E-62 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Vc3S01_2423 3c626ed1b371d49b1188e0ec754ba7aa 634 PRINTS PR00775 90kDa heat shock protein signature 125 147 2.7E-62 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Vc3S01_2423 3c626ed1b371d49b1188e0ec754ba7aa 634 PRINTS PR00775 90kDa heat shock protein signature 80 97 2.7E-62 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Vc3S01_2423 3c626ed1b371d49b1188e0ec754ba7aa 634 PRINTS PR00775 90kDa heat shock protein signature 177 194 2.7E-62 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Vc3S01_2423 3c626ed1b371d49b1188e0ec754ba7aa 634 SUPERFAMILY SSF110942 520 632 2.35E-33 T 12-10-2018 IPR037196 HSP90, C-terminal domain Vc3S01_2423 3c626ed1b371d49b1188e0ec754ba7aa 634 SMART SM00387 32 189 1.4E-6 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_2423 3c626ed1b371d49b1188e0ec754ba7aa 634 Gene3D G3DSA:1.20.120.790 501 632 4.1E-42 T 12-10-2018 IPR037196 HSP90, C-terminal domain Vc3S01_2423 3c626ed1b371d49b1188e0ec754ba7aa 634 Hamap MF_00505 Chaperone protein HtpG [htpG]. 7 632 32.145 T 12-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 Vc3S01_2423 3c626ed1b371d49b1188e0ec754ba7aa 634 Gene3D G3DSA:3.40.50.11260 410 500 9.7E-34 T 12-10-2018 Vc3S01_2423 3c626ed1b371d49b1188e0ec754ba7aa 634 SUPERFAMILY SSF54211 238 493 1.29E-98 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Vc3S01_2423 3c626ed1b371d49b1188e0ec754ba7aa 634 SUPERFAMILY SSF55874 10 216 1.02E-62 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_2423 3c626ed1b371d49b1188e0ec754ba7aa 634 Pfam PF00183 Hsp90 protein 228 632 6.2E-127 T 12-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 Vc3S01_2423 3c626ed1b371d49b1188e0ec754ba7aa 634 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 30 176 2.7E-12 T 12-10-2018 Vc3S01_A0525 5d5a6124c0aa906b76862f5c11f7b944 276 SUPERFAMILY SSF52540 18 247 2.17E-7 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A0525 5d5a6124c0aa906b76862f5c11f7b944 276 Pfam PF10364 Putative capsular polysaccharide synthesis protein 121 257 1.2E-59 T 12-10-2018 IPR018831 Uncharacterised protein family NKWYS Vc3S01_1397 82558bd00bfddc690a83043eb6d73980 235 PIRSF PIRSF000126 1 225 3.1E-52 T 12-10-2018 Vc3S01_1397 82558bd00bfddc690a83043eb6d73980 235 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 2.8E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_1397 82558bd00bfddc690a83043eb6d73980 235 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 2.8E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_1397 82558bd00bfddc690a83043eb6d73980 235 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 2.8E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_1397 82558bd00bfddc690a83043eb6d73980 235 Pfam PF00106 short chain dehydrogenase 3 193 2.2E-47 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_1397 82558bd00bfddc690a83043eb6d73980 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 3.1E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_1397 82558bd00bfddc690a83043eb6d73980 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 3.1E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_1397 82558bd00bfddc690a83043eb6d73980 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 3.1E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_1397 82558bd00bfddc690a83043eb6d73980 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.1E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_1397 82558bd00bfddc690a83043eb6d73980 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 3.1E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_1397 82558bd00bfddc690a83043eb6d73980 235 Gene3D G3DSA:3.40.50.720 1 231 1.5E-54 T 12-10-2018 Vc3S01_1397 82558bd00bfddc690a83043eb6d73980 235 SUPERFAMILY SSF51735 3 217 1.11E-53 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_2538 686301d5ee4997b3ca60b5808d74163e 183 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 5 154 3.4E-36 T 12-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 Vc3S01_2538 686301d5ee4997b3ca60b5808d74163e 183 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 4 178 5.1E-82 T 12-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 Vc3S01_2538 686301d5ee4997b3ca60b5808d74163e 183 Pfam PF13242 HAD-hyrolase-like 107 176 6.7E-13 T 12-10-2018 Vc3S01_2538 686301d5ee4997b3ca60b5808d74163e 183 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 4 152 5.5E-39 T 12-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 Vc3S01_2538 686301d5ee4997b3ca60b5808d74163e 183 PIRSF PIRSF004682 1 183 5.3E-64 T 12-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 Vc3S01_2538 686301d5ee4997b3ca60b5808d74163e 183 Gene3D G3DSA:3.40.50.1000 2 183 3.5E-62 T 12-10-2018 IPR023214 HAD superfamily Vc3S01_2538 686301d5ee4997b3ca60b5808d74163e 183 SUPERFAMILY SSF56784 4 181 1.49E-49 T 12-10-2018 IPR036412 HAD-like superfamily Vc3S01_2685 a8b93c683e5c3767f9705e26db62349b 489 Gene3D G3DSA:1.10.530.10 300 465 1.6E-40 T 12-10-2018 Vc3S01_2685 a8b93c683e5c3767f9705e26db62349b 489 SMART SM00062 47 284 1.2E-19 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Vc3S01_2685 a8b93c683e5c3767f9705e26db62349b 489 Pfam PF01464 Transglycosylase SLT domain 305 419 5.7E-21 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 Vc3S01_2685 a8b93c683e5c3767f9705e26db62349b 489 SUPERFAMILY SSF53850 42 272 4.3E-35 T 12-10-2018 Vc3S01_2685 a8b93c683e5c3767f9705e26db62349b 489 SUPERFAMILY SSF53955 301 461 1.38E-38 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily Vc3S01_2685 a8b93c683e5c3767f9705e26db62349b 489 Gene3D G3DSA:3.40.190.10 42 272 2.0E-48 T 12-10-2018 Vc3S01_2685 a8b93c683e5c3767f9705e26db62349b 489 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 57 270 7.5E-28 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Vc3S01_2685 a8b93c683e5c3767f9705e26db62349b 489 Gene3D G3DSA:3.40.190.10 136 240 2.0E-48 T 12-10-2018 Vc3S01_1580 b52cdf3189c2e5ee10ecddc2a6c1a0e5 173 Gene3D G3DSA:2.30.110.20 2 168 6.9E-16 T 12-10-2018 IPR036624 Hcp1-like superfamily Vc3S01_1580 b52cdf3189c2e5ee10ecddc2a6c1a0e5 173 Pfam PF05638 Type VI secretion system effector, Hcp 5 144 1.2E-18 T 12-10-2018 IPR008514 Type VI secretion system effector, Hcp Vc3S01_1580 b52cdf3189c2e5ee10ecddc2a6c1a0e5 173 SUPERFAMILY SSF141452 1 167 1.03E-24 T 12-10-2018 IPR036624 Hcp1-like superfamily Vc3S01_A1826 4bffc8e538edd6ffd3554978415e6e9f 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 2.2E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A1826 4bffc8e538edd6ffd3554978415e6e9f 309 SUPERFAMILY SSF53850 89 296 1.52E-39 T 12-10-2018 Vc3S01_A1826 4bffc8e538edd6ffd3554978415e6e9f 309 Pfam PF03466 LysR substrate binding domain 88 294 1.8E-39 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_A1826 4bffc8e538edd6ffd3554978415e6e9f 309 SUPERFAMILY SSF46785 4 112 3.23E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A1826 4bffc8e538edd6ffd3554978415e6e9f 309 Gene3D G3DSA:1.10.10.10 1 90 5.3E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A1826 4bffc8e538edd6ffd3554978415e6e9f 309 Gene3D G3DSA:3.40.190.290 91 293 4.8E-57 T 12-10-2018 Vc3S01_A1826 4bffc8e538edd6ffd3554978415e6e9f 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.1E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A1826 4bffc8e538edd6ffd3554978415e6e9f 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.1E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A1826 4bffc8e538edd6ffd3554978415e6e9f 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.1E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A0848 8c0c1881fc23469ee3f3c26c99dfeb9f 586 Gene3D G3DSA:3.40.50.300 172 303 1.5E-21 T 12-10-2018 Vc3S01_A0848 8c0c1881fc23469ee3f3c26c99dfeb9f 586 SUPERFAMILY SSF52540 2 564 2.1E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A0848 8c0c1881fc23469ee3f3c26c99dfeb9f 586 Gene3D G3DSA:3.40.50.300 1 111 2.6E-16 T 12-10-2018 Vc3S01_A0848 8c0c1881fc23469ee3f3c26c99dfeb9f 586 Pfam PF13245 AAA domain 17 263 2.2E-16 T 12-10-2018 Vc3S01_2273 5fb5608438bbe144e40098bbdd1d45f5 179 Hamap MF_01047 UPF0227 protein YcfP [ycfP]. 1 178 48.509 T 12-10-2018 IPR022987 Uncharacterised protein family UPF0227 Vc3S01_2273 5fb5608438bbe144e40098bbdd1d45f5 179 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 177 4.5E-69 T 12-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA Vc3S01_2273 5fb5608438bbe144e40098bbdd1d45f5 179 SUPERFAMILY SSF53474 2 176 9.32E-6 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_2273 5fb5608438bbe144e40098bbdd1d45f5 179 Gene3D G3DSA:3.40.50.1820 1 179 1.1E-19 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_2697 799943f5731d4bd3225256cf33a89f4c 370 Gene3D G3DSA:3.30.420.40 146 329 2.6E-133 T 12-10-2018 Vc3S01_2697 799943f5731d4bd3225256cf33a89f4c 370 Gene3D G3DSA:3.30.420.40 12 364 2.6E-133 T 12-10-2018 Vc3S01_2697 799943f5731d4bd3225256cf33a89f4c 370 SUPERFAMILY SSF53067 6 343 1.13E-26 T 12-10-2018 Vc3S01_2697 799943f5731d4bd3225256cf33a89f4c 370 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 5 369 41.988 T 12-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 Vc3S01_2697 799943f5731d4bd3225256cf33a89f4c 370 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 6 369 2.9E-168 T 12-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 Vc3S01_0437 391fe08c1eb56e59badf562211dda45a 266 SUPERFAMILY SSF49785 2 156 1.04E-16 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily Vc3S01_0437 391fe08c1eb56e59badf562211dda45a 266 Gene3D G3DSA:2.60.120.260 26 157 3.6E-7 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily Vc3S01_A0091 95379ef6ec1984c521fe65a27791b1b7 394 Pfam PF00990 Diguanylate cyclase, GGDEF domain 191 358 6.1E-40 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A0091 95379ef6ec1984c521fe65a27791b1b7 394 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 187 361 3.7E-41 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A0091 95379ef6ec1984c521fe65a27791b1b7 394 SUPERFAMILY SSF55073 196 363 1.33E-40 T 12-10-2018 IPR029787 Nucleotide cyclase Vc3S01_A0091 95379ef6ec1984c521fe65a27791b1b7 394 SMART SM00267 180 362 9.0E-49 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A0091 95379ef6ec1984c521fe65a27791b1b7 394 Gene3D G3DSA:3.30.70.270 186 378 7.7E-51 T 12-10-2018 Vc3S01_0765 d948d52657a50b661df521d62d78ae5f 571 SUPERFAMILY SSF52954 463 570 5.89E-34 T 12-10-2018 Vc3S01_0765 d948d52657a50b661df521d62d78ae5f 571 Pfam PF03129 Anticodon binding domain 475 568 1.3E-22 T 12-10-2018 IPR004154 Anticodon-binding Vc3S01_0765 d948d52657a50b661df521d62d78ae5f 571 Pfam PF04073 Aminoacyl-tRNA editing domain 257 378 7.1E-25 T 12-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 Vc3S01_0765 d948d52657a50b661df521d62d78ae5f 571 Gene3D G3DSA:3.30.930.10 11 465 8.4E-234 T 12-10-2018 Vc3S01_0765 d948d52657a50b661df521d62d78ae5f 571 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 459 2.0E-39 T 12-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Vc3S01_0765 d948d52657a50b661df521d62d78ae5f 571 Gene3D G3DSA:3.90.960.10 240 389 8.4E-234 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Vc3S01_0765 d948d52657a50b661df521d62d78ae5f 571 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 568 1.8E-245 T 12-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 Vc3S01_0765 d948d52657a50b661df521d62d78ae5f 571 SUPERFAMILY SSF55826 218 390 3.01E-30 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Vc3S01_0765 d948d52657a50b661df521d62d78ae5f 571 SUPERFAMILY SSF55681 10 478 4.61E-98 T 12-10-2018 Vc3S01_0765 d948d52657a50b661df521d62d78ae5f 571 PIRSF PIRSF001535 1 571 9.3E-265 T 12-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 Vc3S01_0765 d948d52657a50b661df521d62d78ae5f 571 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 571 40.886 T 12-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 Vc3S01_0765 d948d52657a50b661df521d62d78ae5f 571 Gene3D G3DSA:3.40.50.800 4 555 8.4E-234 T 12-10-2018 IPR036621 Anticodon-binding domain superfamily Vc3S01_0765 d948d52657a50b661df521d62d78ae5f 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 2.4E-16 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Vc3S01_0765 d948d52657a50b661df521d62d78ae5f 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 2.4E-16 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Vc3S01_0765 d948d52657a50b661df521d62d78ae5f 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 2.4E-16 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Vc3S01_0765 d948d52657a50b661df521d62d78ae5f 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 2.4E-16 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Vc3S01_A0327 d4ee1b0703f1d601978337a454a7fee3 299 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 141 1.3E-13 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Vc3S01_A0327 d4ee1b0703f1d601978337a454a7fee3 299 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 183 1.8E-55 T 12-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 Vc3S01_A0327 d4ee1b0703f1d601978337a454a7fee3 299 SUPERFAMILY SSF64518 1 297 2.09E-56 T 12-10-2018 Vc3S01_3170 7cbfa74a2e106f4905d038372a142445 189 SUPERFAMILY SSF57783 66 110 1.53E-14 T 12-10-2018 Vc3S01_3170 7cbfa74a2e106f4905d038372a142445 189 SUPERFAMILY SSF57783 17 64 2.55E-13 T 12-10-2018 Vc3S01_3170 7cbfa74a2e106f4905d038372a142445 189 Gene3D G3DSA:3.30.65.10 63 106 4.6E-8 T 12-10-2018 Vc3S01_3170 7cbfa74a2e106f4905d038372a142445 189 Gene3D G3DSA:3.30.65.10 11 62 2.9E-8 T 12-10-2018 Vc3S01_3170 7cbfa74a2e106f4905d038372a142445 189 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 67 103 1.3E-16 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 Vc3S01_3170 7cbfa74a2e106f4905d038372a142445 189 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 21 56 2.4E-13 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 Vc3S01_3170 7cbfa74a2e106f4905d038372a142445 189 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 115 152 2.3E-16 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 Vc3S01_3170 7cbfa74a2e106f4905d038372a142445 189 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 155 176 2.7 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 Vc3S01_0634 66610e92b2f6032ea50a48490859868d 710 Pfam PF00575 S1 RNA binding domain 620 691 2.0E-18 T 12-10-2018 IPR003029 S1 domain GO:0003676 Vc3S01_0634 66610e92b2f6032ea50a48490859868d 710 SUPERFAMILY SSF50249 608 695 3.17E-21 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Vc3S01_0634 66610e92b2f6032ea50a48490859868d 710 Gene3D G3DSA:3.30.1370.10 551 622 1.5E-18 T 12-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 Vc3S01_0634 66610e92b2f6032ea50a48490859868d 710 Gene3D G3DSA:3.30.230.70 2 229 3.8E-77 T 12-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Vc3S01_0634 66610e92b2f6032ea50a48490859868d 710 SUPERFAMILY SSF54211 299 493 3.85E-46 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Vc3S01_0634 66610e92b2f6032ea50a48490859868d 710 SUPERFAMILY SSF46915 240 321 3.66E-19 T 12-10-2018 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Vc3S01_0634 66610e92b2f6032ea50a48490859868d 710 SMART SM00316 621 691 3.3E-25 T 12-10-2018 IPR022967 RNA-binding domain, S1 Vc3S01_0634 66610e92b2f6032ea50a48490859868d 710 SUPERFAMILY SSF55666 146 236 9.68E-29 T 12-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Vc3S01_0634 66610e92b2f6032ea50a48490859868d 710 Pfam PF00013 KH domain 557 615 1.6E-8 T 12-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 Vc3S01_0634 66610e92b2f6032ea50a48490859868d 710 SUPERFAMILY SSF55666 451 550 9.68E-28 T 12-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Vc3S01_0634 66610e92b2f6032ea50a48490859868d 710 SUPERFAMILY SSF54211 5 145 4.1E-48 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Vc3S01_0634 66610e92b2f6032ea50a48490859868d 710 Gene3D G3DSA:2.40.50.140 623 694 1.7E-29 T 12-10-2018 Vc3S01_0634 66610e92b2f6032ea50a48490859868d 710 Pfam PF01138 3' exoribonuclease family, domain 1 17 145 3.8E-18 T 12-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Vc3S01_0634 66610e92b2f6032ea50a48490859868d 710 Pfam PF01138 3' exoribonuclease family, domain 1 325 457 4.8E-20 T 12-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Vc3S01_0634 66610e92b2f6032ea50a48490859868d 710 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 243 321 1.6E-23 T 12-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Vc3S01_0634 66610e92b2f6032ea50a48490859868d 710 PIRSF PIRSF005499 2 710 9.8E-298 T 12-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Vc3S01_0634 66610e92b2f6032ea50a48490859868d 710 Gene3D G3DSA:3.30.230.70 234 550 4.9E-114 T 12-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Vc3S01_0634 66610e92b2f6032ea50a48490859868d 710 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 11 692 0.0 T 12-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Vc3S01_0634 66610e92b2f6032ea50a48490859868d 710 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 4 694 30.144 T 12-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Vc3S01_0634 66610e92b2f6032ea50a48490859868d 710 SUPERFAMILY SSF54791 553 630 1.06E-15 T 12-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 Vc3S01_0634 66610e92b2f6032ea50a48490859868d 710 SMART SM00322 553 618 3.6E-11 T 12-10-2018 IPR004087 K Homology domain GO:0003676 Vc3S01_0634 66610e92b2f6032ea50a48490859868d 710 Pfam PF03725 3' exoribonuclease family, domain 2 148 211 2.9E-13 T 12-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Vc3S01_2312 06ef50087078152fa567d1648e029b95 572 PIRSF PIRSF004983 3 572 1.7E-181 T 12-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 Vc3S01_2312 06ef50087078152fa567d1648e029b95 572 Gene3D G3DSA:3.40.50.970 4 198 1.0E-56 T 12-10-2018 Vc3S01_2312 06ef50087078152fa567d1648e029b95 572 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 12 444 1.6E-127 T 12-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 Vc3S01_2312 06ef50087078152fa567d1648e029b95 572 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 6 568 32.096 T 12-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 Vc3S01_2312 06ef50087078152fa567d1648e029b95 572 Gene3D G3DSA:3.40.50.1220 215 346 6.1E-37 T 12-10-2018 Vc3S01_2312 06ef50087078152fa567d1648e029b95 572 SUPERFAMILY SSF52518 9 172 7.85E-31 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold Vc3S01_2312 06ef50087078152fa567d1648e029b95 572 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 13 141 9.5E-30 T 12-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 Vc3S01_2312 06ef50087078152fa567d1648e029b95 572 Pfam PF16582 Middle domain of thiamine pyrophosphate 188 402 3.1E-35 T 12-10-2018 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 Vc3S01_2312 06ef50087078152fa567d1648e029b95 572 Gene3D G3DSA:3.40.50.970 365 570 1.3E-46 T 12-10-2018 Vc3S01_2312 06ef50087078152fa567d1648e029b95 572 SUPERFAMILY SSF52518 392 561 8.46E-24 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold Vc3S01_2312 06ef50087078152fa567d1648e029b95 572 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 421 549 9.3E-6 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Vc3S01_3114 6f3abd4acb2aa167015af738700f272b 1054 Gene3D G3DSA:3.20.20.450 774 1036 1.3E-74 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_3114 6f3abd4acb2aa167015af738700f272b 1054 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 609 773 4.0E-34 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_3114 6f3abd4acb2aa167015af738700f272b 1054 Pfam PF00563 EAL domain 794 1028 2.9E-55 T 12-10-2018 IPR001633 EAL domain Vc3S01_3114 6f3abd4acb2aa167015af738700f272b 1054 Gene3D G3DSA:3.30.70.270 604 773 5.5E-46 T 12-10-2018 Vc3S01_3114 6f3abd4acb2aa167015af738700f272b 1054 Pfam PF13426 PAS domain 502 601 8.5E-10 T 12-10-2018 IPR000014 PAS domain Vc3S01_3114 6f3abd4acb2aa167015af738700f272b 1054 Gene3D G3DSA:3.30.450.20 492 603 2.5E-18 T 12-10-2018 Vc3S01_3114 6f3abd4acb2aa167015af738700f272b 1054 SMART SM00086 437 479 55.0 T 12-10-2018 IPR001610 PAC motif Vc3S01_3114 6f3abd4acb2aa167015af738700f272b 1054 SMART SM00086 564 602 0.01 T 12-10-2018 IPR001610 PAC motif Vc3S01_3114 6f3abd4acb2aa167015af738700f272b 1054 SUPERFAMILY SSF141868 792 1040 1.96E-69 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_3114 6f3abd4acb2aa167015af738700f272b 1054 Gene3D G3DSA:3.40.50.2300 72 277 1.9E-5 T 12-10-2018 Vc3S01_3114 6f3abd4acb2aa167015af738700f272b 1054 SMART SM00052 786 1033 8.1E-57 T 12-10-2018 IPR001633 EAL domain Vc3S01_3114 6f3abd4acb2aa167015af738700f272b 1054 SUPERFAMILY SSF55785 354 477 1.52E-5 T 12-10-2018 IPR035965 PAS domain superfamily Vc3S01_3114 6f3abd4acb2aa167015af738700f272b 1054 SMART SM00091 491 557 0.008 T 12-10-2018 IPR000014 PAS domain Vc3S01_3114 6f3abd4acb2aa167015af738700f272b 1054 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 489 609 9.8E-16 T 12-10-2018 IPR000014 PAS domain Vc3S01_3114 6f3abd4acb2aa167015af738700f272b 1054 Gene3D G3DSA:3.40.50.2300 137 258 1.9E-5 T 12-10-2018 Vc3S01_3114 6f3abd4acb2aa167015af738700f272b 1054 Pfam PF00990 Diguanylate cyclase, GGDEF domain 613 770 2.4E-35 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_3114 6f3abd4acb2aa167015af738700f272b 1054 SUPERFAMILY SSF55073 618 774 1.41E-40 T 12-10-2018 IPR029787 Nucleotide cyclase Vc3S01_3114 6f3abd4acb2aa167015af738700f272b 1054 SUPERFAMILY SSF55785 476 600 2.27E-19 T 12-10-2018 IPR035965 PAS domain superfamily Vc3S01_3114 6f3abd4acb2aa167015af738700f272b 1054 SMART SM00267 602 774 2.4E-44 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_3114 6f3abd4acb2aa167015af738700f272b 1054 SUPERFAMILY SSF53271 53 208 5.71E-6 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like Vc3S01_3114 6f3abd4acb2aa167015af738700f272b 1054 Gene3D G3DSA:3.30.450.20 352 490 4.5E-8 T 12-10-2018 Vc3S01_A0006 5dc6fdade36edb9650c264fe50f498e5 284 Pfam PF00005 ABC transporter 36 191 5.3E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_A0006 5dc6fdade36edb9650c264fe50f498e5 284 Gene3D G3DSA:3.40.50.300 13 283 1.4E-85 T 12-10-2018 Vc3S01_A0006 5dc6fdade36edb9650c264fe50f498e5 284 SUPERFAMILY SSF52540 15 263 3.75E-68 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A0006 5dc6fdade36edb9650c264fe50f498e5 284 SMART SM00382 44 250 4.5E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_A0006 5dc6fdade36edb9650c264fe50f498e5 284 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_A0019 f951bf4b4bd04a3520eda3ea1a116788 232 Gene3D G3DSA:3.40.50.300 1 229 6.4E-67 T 12-10-2018 Vc3S01_A0019 f951bf4b4bd04a3520eda3ea1a116788 232 Pfam PF00005 ABC transporter 21 169 1.5E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_A0019 f951bf4b4bd04a3520eda3ea1a116788 232 SUPERFAMILY SSF52540 1 223 5.32E-69 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A0019 f951bf4b4bd04a3520eda3ea1a116788 232 SMART SM00382 30 219 3.4E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_A0019 f951bf4b4bd04a3520eda3ea1a116788 232 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_2177 3a61e3b92e48b9f36cf74c99d1ffdb9b 149 Pfam PF06610 L-alanine exporter 8 142 1.1E-69 T 12-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 Vc3S01_2177 3a61e3b92e48b9f36cf74c99d1ffdb9b 149 Hamap MF_00914 L-alanine exporter AlaE [alaE]. 2 145 32.046 T 12-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 Vc3S01_2177 3a61e3b92e48b9f36cf74c99d1ffdb9b 149 ProDom PD090021 MEMBRANE YGAW TRANSMEMBRANE INNER VV2263 Y3636 VC1828 VP1070 15 142 4.0E-67 T 12-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 Vc3S01_A1909 1f79e6a0c3714fab57e0b7cdbbcc2f8a 333 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 212 223 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Vc3S01_A1909 1f79e6a0c3714fab57e0b7cdbbcc2f8a 333 Pfam PF14697 4Fe-4S dicluster domain 176 224 2.4E-9 T 12-10-2018 Vc3S01_A1909 1f79e6a0c3714fab57e0b7cdbbcc2f8a 333 PRINTS PR00397 Sirohaem Fe-binding site signature 151 169 7.7E-8 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Vc3S01_A1909 1f79e6a0c3714fab57e0b7cdbbcc2f8a 333 PRINTS PR00397 Sirohaem Fe-binding site signature 110 128 7.7E-8 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Vc3S01_A1909 1f79e6a0c3714fab57e0b7cdbbcc2f8a 333 TIGRFAM TIGR02912 sulfite_red_C: sulfite reductase, subunit C 4 321 4.1E-141 T 12-10-2018 IPR014261 Sulphite reductase, subunit C Vc3S01_A1909 1f79e6a0c3714fab57e0b7cdbbcc2f8a 333 SUPERFAMILY SSF56014 110 327 3.76E-29 T 12-10-2018 Vc3S01_A1909 1f79e6a0c3714fab57e0b7cdbbcc2f8a 333 Gene3D G3DSA:3.90.480.20 3 105 2.0E-11 T 12-10-2018 Vc3S01_A1909 1f79e6a0c3714fab57e0b7cdbbcc2f8a 333 Gene3D G3DSA:3.30.70.20 175 233 2.4E-12 T 12-10-2018 Vc3S01_A1909 1f79e6a0c3714fab57e0b7cdbbcc2f8a 333 SUPERFAMILY SSF54862 153 232 4.0E-17 T 12-10-2018 Vc3S01_A1909 1f79e6a0c3714fab57e0b7cdbbcc2f8a 333 SUPERFAMILY SSF55124 18 83 2.13E-17 T 12-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Vc3S01_A1909 1f79e6a0c3714fab57e0b7cdbbcc2f8a 333 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 110 303 1.0E-15 T 12-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Vc3S01_A1909 1f79e6a0c3714fab57e0b7cdbbcc2f8a 333 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 24 82 2.3E-14 T 12-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Vc3S01_1510 4638f5b0f3a5435f0a0dc82fddb9afdd 225 Gene3D G3DSA:3.50.30.100 1 197 2.8E-53 T 12-10-2018 Vc3S01_1510 4638f5b0f3a5435f0a0dc82fddb9afdd 225 Pfam PF03737 Aldolase/RraA 28 174 2.6E-38 T 12-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein Vc3S01_1510 4638f5b0f3a5435f0a0dc82fddb9afdd 225 SUPERFAMILY SSF89562 23 185 4.71E-47 T 12-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily Vc3S01_1510 4638f5b0f3a5435f0a0dc82fddb9afdd 225 TIGRFAM TIGR02798 ligK_PcmE: 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase 5 225 2.2E-105 T 12-10-2018 IPR014165 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase KEGG: 00362+4.1.3.17|KEGG: 00660+4.1.3.17|MetaCyc: PWY-7701 Vc3S01_2582 e856c5cebe6ee0910db4719ca13e70c7 1303 SUPERFAMILY SSF109736 156 221 3.53E-20 T 12-10-2018 Vc3S01_2582 e856c5cebe6ee0910db4719ca13e70c7 1303 SUPERFAMILY SSF55326 619 817 7.06E-70 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Vc3S01_2582 e856c5cebe6ee0910db4719ca13e70c7 1303 Gene3D G3DSA:3.30.1330.10 615 808 6.1E-26 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Vc3S01_2582 e856c5cebe6ee0910db4719ca13e70c7 1303 SUPERFAMILY SSF56042 433 616 9.27E-53 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Vc3S01_2582 e856c5cebe6ee0910db4719ca13e70c7 1303 Gene3D G3DSA:3.40.50.880 989 1303 3.0E-140 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Vc3S01_2582 e856c5cebe6ee0910db4719ca13e70c7 1303 Gene3D G3DSA:3.90.650.10 421 607 1.0E-58 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Vc3S01_2582 e856c5cebe6ee0910db4719ca13e70c7 1303 SUPERFAMILY SSF52317 1043 1301 2.99E-98 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Vc3S01_2582 e856c5cebe6ee0910db4719ca13e70c7 1303 Gene3D G3DSA:3.90.650.10 809 988 4.2E-33 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Vc3S01_2582 e856c5cebe6ee0910db4719ca13e70c7 1303 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 3 1301 0.0 T 12-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Vc3S01_2582 e856c5cebe6ee0910db4719ca13e70c7 1303 Gene3D G3DSA:1.10.8.750 153 214 4.3E-26 T 12-10-2018 Vc3S01_2582 e856c5cebe6ee0910db4719ca13e70c7 1303 SMART SM01211 1047 1302 3.4E-158 T 12-10-2018 Vc3S01_2582 e856c5cebe6ee0910db4719ca13e70c7 1303 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1303 21.338 T 12-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Vc3S01_2582 e856c5cebe6ee0910db4719ca13e70c7 1303 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1047 1300 5.5E-106 T 12-10-2018 Vc3S01_2582 e856c5cebe6ee0910db4719ca13e70c7 1303 SUPERFAMILY SSF82697 1 151 1.2E-50 T 12-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Vc3S01_2582 e856c5cebe6ee0910db4719ca13e70c7 1303 Gene3D G3DSA:3.30.1330.10 215 420 2.9E-41 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Vc3S01_2582 e856c5cebe6ee0910db4719ca13e70c7 1303 SUPERFAMILY SSF56042 825 1041 4.04E-54 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Vc3S01_2582 e856c5cebe6ee0910db4719ca13e70c7 1303 SUPERFAMILY SSF55326 222 429 2.2E-64 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Vc3S01_2582 e856c5cebe6ee0910db4719ca13e70c7 1303 Pfam PF02769 AIR synthase related protein, C-terminal domain 835 974 9.0E-16 T 12-10-2018 IPR010918 PurM-like, C-terminal domain Vc3S01_2582 e856c5cebe6ee0910db4719ca13e70c7 1303 Pfam PF02769 AIR synthase related protein, C-terminal domain 433 590 4.5E-27 T 12-10-2018 IPR010918 PurM-like, C-terminal domain Vc3S01_A1550 11f6cc01fc7ca0bcb3edb017c7f2fda8 568 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 111 319 8.4E-79 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Vc3S01_A1550 11f6cc01fc7ca0bcb3edb017c7f2fda8 568 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 211 392 2.7E-35 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Vc3S01_A1550 11f6cc01fc7ca0bcb3edb017c7f2fda8 568 Gene3D G3DSA:2.40.50.100 202 246 2.4E-29 T 12-10-2018 Vc3S01_A1550 11f6cc01fc7ca0bcb3edb017c7f2fda8 568 Gene3D G3DSA:2.40.420.20 326 415 6.8E-22 T 12-10-2018 Vc3S01_A1550 11f6cc01fc7ca0bcb3edb017c7f2fda8 568 Pfam PF11604 Copper binding periplasmic protein CusF 419 484 2.2E-22 T 12-10-2018 IPR021647 Copper binding periplasmic protein CusF Vc3S01_A1550 11f6cc01fc7ca0bcb3edb017c7f2fda8 568 Pfam PF11604 Copper binding periplasmic protein CusF 499 564 2.0E-19 T 12-10-2018 IPR021647 Copper binding periplasmic protein CusF Vc3S01_A1550 11f6cc01fc7ca0bcb3edb017c7f2fda8 568 Gene3D G3DSA:1.10.287.470 163 175 4.9E-10 T 12-10-2018 Vc3S01_A1550 11f6cc01fc7ca0bcb3edb017c7f2fda8 568 Gene3D G3DSA:2.40.420.20 102 113 4.9E-10 T 12-10-2018 Vc3S01_A1550 11f6cc01fc7ca0bcb3edb017c7f2fda8 568 Gene3D G3DSA:2.40.30.170 114 127 4.9E-10 T 12-10-2018 Vc3S01_A1550 11f6cc01fc7ca0bcb3edb017c7f2fda8 568 Gene3D G3DSA:2.40.50.320 495 566 1.7E-16 T 12-10-2018 Vc3S01_A1550 11f6cc01fc7ca0bcb3edb017c7f2fda8 568 Gene3D G3DSA:2.40.50.320 416 485 5.1E-20 T 12-10-2018 Vc3S01_A1550 11f6cc01fc7ca0bcb3edb017c7f2fda8 568 Gene3D G3DSA:2.40.50.100 128 162 4.9E-10 T 12-10-2018 Vc3S01_A1550 11f6cc01fc7ca0bcb3edb017c7f2fda8 568 SUPERFAMILY SSF111369 133 324 1.07E-17 T 12-10-2018 Vc3S01_A1550 11f6cc01fc7ca0bcb3edb017c7f2fda8 568 Gene3D G3DSA:2.40.30.170 247 320 2.4E-29 T 12-10-2018 Vc3S01_0525 0c1507609448547cb5695b308ee9a4e0 93 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 36.655 T 12-10-2018 IPR023081 Cell division protein FtsB Vc3S01_0525 0c1507609448547cb5695b308ee9a4e0 93 Gene3D G3DSA:1.20.5.400 22 63 7.1E-13 T 12-10-2018 Vc3S01_0525 0c1507609448547cb5695b308ee9a4e0 93 Pfam PF04977 Septum formation initiator 11 89 9.2E-30 T 12-10-2018 IPR007060 Septum formation initiator FtsL/DivIC Vc3S01_A0463 ed6270bf8bcf90b9bab4d45a3a008e5a 688 Pfam PF00990 Diguanylate cyclase, GGDEF domain 515 675 1.7E-35 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A0463 ed6270bf8bcf90b9bab4d45a3a008e5a 688 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 512 680 3.0E-37 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A0463 ed6270bf8bcf90b9bab4d45a3a008e5a 688 SUPERFAMILY SSF55781 161 310 2.84E-7 T 12-10-2018 Vc3S01_A0463 ed6270bf8bcf90b9bab4d45a3a008e5a 688 SMART SM00267 503 680 8.6E-45 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A0463 ed6270bf8bcf90b9bab4d45a3a008e5a 688 Gene3D G3DSA:3.30.450.40 316 498 2.5E-5 T 12-10-2018 IPR029016 GAF-like domain superfamily Vc3S01_A0463 ed6270bf8bcf90b9bab4d45a3a008e5a 688 SUPERFAMILY SSF55073 519 681 5.26E-38 T 12-10-2018 IPR029787 Nucleotide cyclase Vc3S01_A0463 ed6270bf8bcf90b9bab4d45a3a008e5a 688 SUPERFAMILY SSF55781 342 489 1.07E-5 T 12-10-2018 Vc3S01_A0463 ed6270bf8bcf90b9bab4d45a3a008e5a 688 Gene3D G3DSA:3.30.70.270 499 683 1.1E-43 T 12-10-2018 Vc3S01_A0463 ed6270bf8bcf90b9bab4d45a3a008e5a 688 Gene3D G3DSA:3.30.450.40 156 315 6.5E-8 T 12-10-2018 IPR029016 GAF-like domain superfamily Vc3S01_A1254 75016184c998d59d3ea16bc7e0e45f22 186 Gene3D G3DSA:3.40.630.30 2 171 5.4E-29 T 12-10-2018 Vc3S01_A1254 75016184c998d59d3ea16bc7e0e45f22 186 Pfam PF13302 Acetyltransferase (GNAT) domain 16 155 2.9E-13 T 12-10-2018 IPR000182 GNAT domain Vc3S01_A1254 75016184c998d59d3ea16bc7e0e45f22 186 SUPERFAMILY SSF55729 14 157 5.74E-25 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_A0313 2677e989536f40df2e5464f58e793300 225 Gene3D G3DSA:1.10.530.10 49 195 8.6E-34 T 12-10-2018 Vc3S01_A0313 2677e989536f40df2e5464f58e793300 225 SUPERFAMILY SSF53955 35 183 7.97E-37 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily Vc3S01_A0313 2677e989536f40df2e5464f58e793300 225 Pfam PF01464 Transglycosylase SLT domain 57 165 7.4E-29 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 Vc3S01_A0313 2677e989536f40df2e5464f58e793300 225 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 70 98 - T 12-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 Vc3S01_0251 a5eef16f4dd78ca447e7cc927a687ba0 310 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 8 301 30.064 T 12-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 Vc3S01_0251 a5eef16f4dd78ca447e7cc927a687ba0 310 SUPERFAMILY SSF52540 10 153 1.2E-18 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0251 a5eef16f4dd78ca447e7cc927a687ba0 310 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 9 294 2.0E-116 T 12-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 Vc3S01_0251 a5eef16f4dd78ca447e7cc927a687ba0 310 Gene3D G3DSA:1.10.20.140 115 186 1.2E-107 T 12-10-2018 Vc3S01_0251 a5eef16f4dd78ca447e7cc927a687ba0 310 Gene3D G3DSA:3.40.50.300 12 292 1.2E-107 T 12-10-2018 Vc3S01_0251 a5eef16f4dd78ca447e7cc927a687ba0 310 Pfam PF01715 IPP transferase 42 287 1.1E-85 T 12-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 Vc3S01_2981 36ca65e4de13ac77ee07e3f5cac15f2d 287 SUPERFAMILY SSF53448 1 285 8.34E-92 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Vc3S01_2981 36ca65e4de13ac77ee07e3f5cac15f2d 287 Gene3D G3DSA:3.90.550.10 1 287 2.2E-86 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Vc3S01_2981 36ca65e4de13ac77ee07e3f5cac15f2d 287 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 286 2.9E-156 T 12-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 Vc3S01_2981 36ca65e4de13ac77ee07e3f5cac15f2d 287 Pfam PF00483 Nucleotidyl transferase 2 238 2.8E-73 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Vc3S01_A1162 91c1504738d3a18e1ffa5b671d101558 144 PIRSF PIRSF000077 25 33 3400.0 T 12-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Vc3S01_A1162 91c1504738d3a18e1ffa5b671d101558 144 PIRSF PIRSF000077 40 142 4.6E-33 T 12-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Vc3S01_A1162 91c1504738d3a18e1ffa5b671d101558 144 Gene3D G3DSA:2.20.28.140 2 37 1.7E-13 T 12-10-2018 Vc3S01_A1162 91c1504738d3a18e1ffa5b671d101558 144 Gene3D G3DSA:3.40.30.10 41 144 3.5E-33 T 12-10-2018 Vc3S01_A1162 91c1504738d3a18e1ffa5b671d101558 144 Pfam PF00085 Thioredoxin 45 140 1.9E-28 T 12-10-2018 IPR013766 Thioredoxin domain GO:0045454 Vc3S01_A1162 91c1504738d3a18e1ffa5b671d101558 144 TIGRFAM TIGR01068 thioredoxin: thioredoxin 47 141 2.2E-35 T 12-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Vc3S01_A1162 91c1504738d3a18e1ffa5b671d101558 144 SUPERFAMILY SSF52833 27 143 9.84E-38 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Vc3S01_A1162 91c1504738d3a18e1ffa5b671d101558 144 PRINTS PR00421 Thioredoxin family signature 106 117 5.0E-8 T 12-10-2018 Vc3S01_A1162 91c1504738d3a18e1ffa5b671d101558 144 PRINTS PR00421 Thioredoxin family signature 58 66 5.0E-8 T 12-10-2018 Vc3S01_A1162 91c1504738d3a18e1ffa5b671d101558 144 PRINTS PR00421 Thioredoxin family signature 66 75 5.0E-8 T 12-10-2018 Vc3S01_p20043 db10bb3bb7605a328340fe7720a52b94 332 Gene3D G3DSA:3.40.50.300 44 331 9.1E-92 T 12-10-2018 Vc3S01_p20043 db10bb3bb7605a328340fe7720a52b94 332 SMART SM00382 67 237 2.8E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_p20043 db10bb3bb7605a328340fe7720a52b94 332 SUPERFAMILY SSF54752 278 331 8.76E-13 T 12-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal Vc3S01_p20043 db10bb3bb7605a328340fe7720a52b94 332 Pfam PF00154 recA bacterial DNA recombination protein 17 276 5.0E-116 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Vc3S01_p20043 db10bb3bb7605a328340fe7720a52b94 332 Hamap MF_00268 Protein RecA [recA]. 14 332 41.909 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Vc3S01_p20043 db10bb3bb7605a328340fe7720a52b94 332 SUPERFAMILY SSF52540 19 275 8.44E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_p20043 db10bb3bb7605a328340fe7720a52b94 332 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 14 331 1.5E-136 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Vc3S01_p20043 db10bb3bb7605a328340fe7720a52b94 332 PRINTS PR00142 RecA protein signature 103 132 1.1E-74 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Vc3S01_p20043 db10bb3bb7605a328340fe7720a52b94 332 PRINTS PR00142 RecA protein signature 252 281 1.1E-74 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Vc3S01_p20043 db10bb3bb7605a328340fe7720a52b94 332 PRINTS PR00142 RecA protein signature 306 323 1.1E-74 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Vc3S01_p20043 db10bb3bb7605a328340fe7720a52b94 332 PRINTS PR00142 RecA protein signature 137 166 1.1E-74 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Vc3S01_p20043 db10bb3bb7605a328340fe7720a52b94 332 PRINTS PR00142 RecA protein signature 219 247 1.1E-74 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Vc3S01_p20043 db10bb3bb7605a328340fe7720a52b94 332 PRINTS PR00142 RecA protein signature 175 204 1.1E-74 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Vc3S01_3002 886f87fecab817c86f015c845e107692 343 Pfam PF00534 Glycosyl transferases group 1 160 314 2.4E-27 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 Vc3S01_3002 886f87fecab817c86f015c845e107692 343 Gene3D G3DSA:3.40.50.2000 62 336 6.2E-45 T 12-10-2018 Vc3S01_3002 886f87fecab817c86f015c845e107692 343 SUPERFAMILY SSF53756 5 340 7.07E-53 T 12-10-2018 Vc3S01_3002 886f87fecab817c86f015c845e107692 343 Gene3D G3DSA:3.40.50.2000 148 323 6.2E-45 T 12-10-2018 Vc3S01_3035 77ffbb2f91629b5835a0b089a22477d3 706 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 27 702 1.2E-270 T 12-10-2018 IPR004811 RelA/SpoT family GO:0015969 Vc3S01_3035 77ffbb2f91629b5835a0b089a22477d3 706 Gene3D G3DSA:3.10.20.30 382 456 4.6E-29 T 12-10-2018 IPR012675 Beta-grasp domain superfamily Vc3S01_3035 77ffbb2f91629b5835a0b089a22477d3 706 Pfam PF13328 HD domain 28 175 5.9E-54 T 12-10-2018 IPR003607 HD/PDEase domain Vc3S01_3035 77ffbb2f91629b5835a0b089a22477d3 706 Pfam PF13291 ACT domain 627 703 4.4E-14 T 12-10-2018 IPR002912 ACT domain Vc3S01_3035 77ffbb2f91629b5835a0b089a22477d3 706 Pfam PF04607 Region found in RelA / SpoT proteins 235 345 9.3E-35 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 Vc3S01_3035 77ffbb2f91629b5835a0b089a22477d3 706 Gene3D G3DSA:3.30.460.10 193 325 2.5E-46 T 12-10-2018 Vc3S01_3035 77ffbb2f91629b5835a0b089a22477d3 706 SUPERFAMILY SSF109604 3 190 2.54E-75 T 12-10-2018 Vc3S01_3035 77ffbb2f91629b5835a0b089a22477d3 706 SMART SM00471 41 153 4.3E-11 T 12-10-2018 IPR003607 HD/PDEase domain Vc3S01_3035 77ffbb2f91629b5835a0b089a22477d3 706 Gene3D G3DSA:3.30.70.260 627 706 1.4E-12 T 12-10-2018 Vc3S01_3035 77ffbb2f91629b5835a0b089a22477d3 706 SUPERFAMILY SSF55021 631 703 7.08E-7 T 12-10-2018 Vc3S01_3035 77ffbb2f91629b5835a0b089a22477d3 706 SUPERFAMILY SSF81271 376 448 1.85E-20 T 12-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 Vc3S01_3035 77ffbb2f91629b5835a0b089a22477d3 706 SMART SM00954 235 345 6.9E-59 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 Vc3S01_3035 77ffbb2f91629b5835a0b089a22477d3 706 SUPERFAMILY SSF81301 180 393 2.78E-59 T 12-10-2018 Vc3S01_3035 77ffbb2f91629b5835a0b089a22477d3 706 Pfam PF02824 TGS domain 389 447 4.9E-19 T 12-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 Vc3S01_3035 77ffbb2f91629b5835a0b089a22477d3 706 Gene3D G3DSA:1.10.3210.10 3 190 2.7E-80 T 12-10-2018 Vc3S01_2891 71ccff442d4326e4529410d1f66269be 115 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 5 112 6.0E-25 T 12-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like Vc3S01_2891 71ccff442d4326e4529410d1f66269be 115 SUPERFAMILY SSF110857 3 114 1.44E-32 T 12-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily Vc3S01_2891 71ccff442d4326e4529410d1f66269be 115 Gene3D G3DSA:3.10.490.10 4 115 3.2E-39 T 12-10-2018 Vc3S01_2007 1280460af851dd52baff44892ccd0ee1 484 Gene3D G3DSA:3.30.870.10 315 459 1.0E-24 T 12-10-2018 Vc3S01_2007 1280460af851dd52baff44892ccd0ee1 484 Hamap MF_00190 Cardiolipin synthase A [clsA]. 2 484 49.835 T 12-10-2018 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 Vc3S01_2007 1280460af851dd52baff44892ccd0ee1 484 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 13 484 1.8E-157 T 12-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 Vc3S01_2007 1280460af851dd52baff44892ccd0ee1 484 Pfam PF13091 PLD-like domain 327 447 7.7E-25 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Vc3S01_2007 1280460af851dd52baff44892ccd0ee1 484 Pfam PF13091 PLD-like domain 134 269 1.3E-16 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Vc3S01_2007 1280460af851dd52baff44892ccd0ee1 484 SUPERFAMILY SSF56024 273 469 7.85E-47 T 12-10-2018 Vc3S01_2007 1280460af851dd52baff44892ccd0ee1 484 SUPERFAMILY SSF56024 69 313 4.26E-50 T 12-10-2018 Vc3S01_2007 1280460af851dd52baff44892ccd0ee1 484 Pfam PF13396 Phospholipase_D-nuclease N-terminal 23 59 9.0E-7 T 12-10-2018 IPR027379 Cardiolipin synthase N-terminal Vc3S01_2007 1280460af851dd52baff44892ccd0ee1 484 Gene3D G3DSA:3.30.870.10 116 309 1.0E-37 T 12-10-2018 Vc3S01_2007 1280460af851dd52baff44892ccd0ee1 484 SMART SM00155 397 424 6.0E-6 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 Vc3S01_2007 1280460af851dd52baff44892ccd0ee1 484 SMART SM00155 219 246 8.0E-6 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 Vc3S01_p10075 30746f4bd66e60ae07683fc14406cfd8 418 Pfam PF03743 Bacterial conjugation TrbI-like protein 231 410 6.8E-53 T 12-10-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI Vc3S01_p10075 30746f4bd66e60ae07683fc14406cfd8 418 Gene3D G3DSA:2.40.128.260 234 409 2.6E-56 T 12-10-2018 Vc3S01_p10075 30746f4bd66e60ae07683fc14406cfd8 418 Gene3D G3DSA:1.10.1200.160 355 390 2.6E-56 T 12-10-2018 Vc3S01_A1763 ef116fb1a915bf41f0b510a56980c992 826 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 16 816 2.4E-164 T 12-10-2018 IPR005887 Alpha-1,2-mannosidase, putative Vc3S01_A1763 ef116fb1a915bf41f0b510a56980c992 826 Gene3D G3DSA:2.70.98.10 39 403 1.0E-215 T 12-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 Vc3S01_A1763 ef116fb1a915bf41f0b510a56980c992 826 Gene3D G3DSA:1.20.1610.10 513 691 1.0E-215 T 12-10-2018 Vc3S01_A1763 ef116fb1a915bf41f0b510a56980c992 826 SUPERFAMILY SSF48208 312 795 1.45E-18 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Vc3S01_A1763 ef116fb1a915bf41f0b510a56980c992 826 Gene3D G3DSA:3.30.2080.10 338 818 1.0E-215 T 12-10-2018 Vc3S01_A1763 ef116fb1a915bf41f0b510a56980c992 826 Gene3D G3DSA:1.20.1050.60 404 512 1.0E-215 T 12-10-2018 Vc3S01_A1763 ef116fb1a915bf41f0b510a56980c992 826 Pfam PF07971 Glycosyl hydrolase family 92 281 815 1.2E-139 T 12-10-2018 IPR012939 Glycosyl hydrolase family 92 Vc3S01_0897 c4b6c3d0fcd9bd1ff4e5fb3677148b24 925 Gene3D G3DSA:3.30.830.10 1 228 1.0E-86 T 12-10-2018 Vc3S01_0897 c4b6c3d0fcd9bd1ff4e5fb3677148b24 925 Gene3D G3DSA:3.30.830.10 618 877 1.4E-108 T 12-10-2018 Vc3S01_0897 c4b6c3d0fcd9bd1ff4e5fb3677148b24 925 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 42 65 - T 12-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 Vc3S01_0897 c4b6c3d0fcd9bd1ff4e5fb3677148b24 925 Gene3D G3DSA:3.30.830.10 470 852 1.4E-108 T 12-10-2018 Vc3S01_0897 c4b6c3d0fcd9bd1ff4e5fb3677148b24 925 SUPERFAMILY SSF63411 703 899 1.14E-44 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Vc3S01_0897 c4b6c3d0fcd9bd1ff4e5fb3677148b24 925 Pfam PF05193 Peptidase M16 inactive domain 648 823 7.3E-9 T 12-10-2018 IPR007863 Peptidase M16, C-terminal Vc3S01_0897 c4b6c3d0fcd9bd1ff4e5fb3677148b24 925 Pfam PF05193 Peptidase M16 inactive domain 182 354 1.3E-24 T 12-10-2018 IPR007863 Peptidase M16, C-terminal Vc3S01_0897 c4b6c3d0fcd9bd1ff4e5fb3677148b24 925 Pfam PF00675 Insulinase (Peptidase family M16) 21 158 2.4E-39 T 12-10-2018 IPR011765 Peptidase M16, N-terminal Vc3S01_0897 c4b6c3d0fcd9bd1ff4e5fb3677148b24 925 Gene3D G3DSA:3.30.830.10 239 468 9.3E-72 T 12-10-2018 Vc3S01_0897 c4b6c3d0fcd9bd1ff4e5fb3677148b24 925 SUPERFAMILY SSF63411 232 468 5.41E-80 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Vc3S01_0897 c4b6c3d0fcd9bd1ff4e5fb3677148b24 925 SUPERFAMILY SSF63411 4 226 4.89E-59 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Vc3S01_0897 c4b6c3d0fcd9bd1ff4e5fb3677148b24 925 Pfam PF16187 Middle or third domain of peptidase_M16 366 641 1.2E-81 T 12-10-2018 IPR032632 Peptidase M16, middle/third domain Vc3S01_0897 c4b6c3d0fcd9bd1ff4e5fb3677148b24 925 SUPERFAMILY SSF63411 470 694 3.83E-60 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Vc3S01_1732 62d0f71c8e1f806581412ec5431d1bcd 370 SUPERFAMILY SSF53756 15 364 4.19E-70 T 12-10-2018 Vc3S01_1732 62d0f71c8e1f806581412ec5431d1bcd 370 Gene3D G3DSA:3.40.50.2000 45 362 3.6E-62 T 12-10-2018 Vc3S01_1732 62d0f71c8e1f806581412ec5431d1bcd 370 Pfam PF00534 Glycosyl transferases group 1 196 340 3.0E-34 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 Vc3S01_1732 62d0f71c8e1f806581412ec5431d1bcd 370 Gene3D G3DSA:3.40.50.2000 180 352 3.6E-62 T 12-10-2018 Vc3S01_1732 62d0f71c8e1f806581412ec5431d1bcd 370 Pfam PF13439 Glycosyltransferase Family 4 26 183 4.2E-15 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Vc3S01_p20057 88a3fd15f7fb6d2d362d88be02fa5215 372 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 30 352 9.7E-22 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Vc3S01_p20057 88a3fd15f7fb6d2d362d88be02fa5215 372 Gene3D G3DSA:3.40.50.300 4 368 9.1E-25 T 12-10-2018 Vc3S01_p20057 88a3fd15f7fb6d2d362d88be02fa5215 372 SUPERFAMILY SSF52540 1 362 7.58E-26 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0842 89f03ed093b552aae3819c857a45ed13 377 PRINTS PR00207 Flagellin signature 37 54 1.4E-27 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Vc3S01_0842 89f03ed093b552aae3819c857a45ed13 377 PRINTS PR00207 Flagellin signature 111 134 1.4E-27 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Vc3S01_0842 89f03ed093b552aae3819c857a45ed13 377 PRINTS PR00207 Flagellin signature 76 95 1.4E-27 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Vc3S01_0842 89f03ed093b552aae3819c857a45ed13 377 Gene3D G3DSA:1.20.1330.10 44 327 1.8E-78 T 12-10-2018 Vc3S01_0842 89f03ed093b552aae3819c857a45ed13 377 Gene3D G3DSA:3.30.70.2120 174 275 1.8E-78 T 12-10-2018 Vc3S01_0842 89f03ed093b552aae3819c857a45ed13 377 Gene3D G3DSA:1.10.8.410 328 376 8.0E-19 T 12-10-2018 Vc3S01_0842 89f03ed093b552aae3819c857a45ed13 377 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 6.2E-45 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Vc3S01_0842 89f03ed093b552aae3819c857a45ed13 377 SUPERFAMILY SSF64518 5 376 3.27E-98 T 12-10-2018 Vc3S01_0842 89f03ed093b552aae3819c857a45ed13 377 Pfam PF00700 Bacterial flagellin C-terminal helical region 293 376 9.2E-24 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Vc3S01_0842 89f03ed093b552aae3819c857a45ed13 377 Pfam PF07196 Flagellin hook IN motif 204 246 3.3E-11 T 12-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 Vc3S01_p40115 0e8990bc404a41e5e3f96f3bbddaa44e 263 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 199 210 1.1E-11 T 12-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial Vc3S01_p40115 0e8990bc404a41e5e3f96f3bbddaa44e 263 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 211 226 1.1E-11 T 12-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial Vc3S01_p40115 0e8990bc404a41e5e3f96f3bbddaa44e 263 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 131 148 1.1E-11 T 12-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial Vc3S01_p40115 0e8990bc404a41e5e3f96f3bbddaa44e 263 Gene3D G3DSA:1.20.120.1220 113 237 1.1E-8 T 12-10-2018 Vc3S01_p40115 0e8990bc404a41e5e3f96f3bbddaa44e 263 Pfam PF01478 Type IV leader peptidase family 124 231 3.0E-20 T 12-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 Vc3S01_A1716 ff21e86dc532d5546c504402cfca5134 195 SUPERFAMILY SSF53335 5 187 8.59E-24 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Vc3S01_A1716 ff21e86dc532d5546c504402cfca5134 195 Pfam PF13649 Methyltransferase domain 36 126 2.4E-9 T 12-10-2018 Vc3S01_A1716 ff21e86dc532d5546c504402cfca5134 195 Gene3D G3DSA:3.40.50.150 1 195 7.9E-22 T 12-10-2018 Vc3S01_2498 0e6cf0a5ba0a1f00cf1e5a7eeb3c48cc 157 Gene3D G3DSA:3.90.960.10 1 157 1.9E-58 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Vc3S01_2498 0e6cf0a5ba0a1f00cf1e5a7eeb3c48cc 157 Pfam PF04073 Aminoacyl-tRNA editing domain 32 146 2.1E-26 T 12-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 Vc3S01_2498 0e6cf0a5ba0a1f00cf1e5a7eeb3c48cc 157 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 156 9.4E-60 T 12-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC Vc3S01_2498 0e6cf0a5ba0a1f00cf1e5a7eeb3c48cc 157 PIRSF PIRSF006181 1 157 3.0E-53 T 12-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC Vc3S01_2498 0e6cf0a5ba0a1f00cf1e5a7eeb3c48cc 157 SUPERFAMILY SSF55826 2 156 1.83E-43 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Vc3S01_0552 3333ccf35fe09cb61f2d5f60c84c8761 460 SMART SM00963 1 86 5.3E-37 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Vc3S01_0552 3333ccf35fe09cb61f2d5f60c84c8761 460 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 1.4E-73 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Vc3S01_0552 3333ccf35fe09cb61f2d5f60c84c8761 460 SMART SM00962 100 296 7.1E-115 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Vc3S01_0552 3333ccf35fe09cb61f2d5f60c84c8761 460 SUPERFAMILY SSF47446 329 430 7.19E-38 T 12-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 Vc3S01_0552 3333ccf35fe09cb61f2d5f60c84c8761 460 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 34.251 T 12-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 Vc3S01_0552 3333ccf35fe09cb61f2d5f60c84c8761 460 Gene3D G3DSA:1.20.120.140 4 305 4.0E-123 T 12-10-2018 Vc3S01_0552 3333ccf35fe09cb61f2d5f60c84c8761 460 Gene3D G3DSA:3.40.50.300 90 285 4.0E-123 T 12-10-2018 Vc3S01_0552 3333ccf35fe09cb61f2d5f60c84c8761 460 SUPERFAMILY SSF52540 42 353 1.38E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0552 3333ccf35fe09cb61f2d5f60c84c8761 460 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 4.0E-179 T 12-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 Vc3S01_0552 3333ccf35fe09cb61f2d5f60c84c8761 460 SMART SM00382 99 247 1.4E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_0552 3333ccf35fe09cb61f2d5f60c84c8761 460 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 1.1E-22 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Vc3S01_0552 3333ccf35fe09cb61f2d5f60c84c8761 460 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Vc3S01_0552 3333ccf35fe09cb61f2d5f60c84c8761 460 Gene3D G3DSA:1.10.260.30 328 453 9.6E-45 T 12-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 Vc3S01_0552 3333ccf35fe09cb61f2d5f60c84c8761 460 Pfam PF02978 Signal peptide binding domain 329 427 3.9E-33 T 12-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 Vc3S01_A2024 7bd88efba1c1a9ea1ab7064d9bdc0456 177 Pfam PF13302 Acetyltransferase (GNAT) domain 11 147 1.1E-21 T 12-10-2018 IPR000182 GNAT domain Vc3S01_A2024 7bd88efba1c1a9ea1ab7064d9bdc0456 177 Gene3D G3DSA:3.40.630.30 5 172 7.6E-28 T 12-10-2018 Vc3S01_A2024 7bd88efba1c1a9ea1ab7064d9bdc0456 177 SUPERFAMILY SSF55729 1 153 7.81E-30 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_2306 838477ed3549d99a21f23dd634174812 293 SUPERFAMILY SSF46785 8 83 6.07E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_2306 838477ed3549d99a21f23dd634174812 293 Gene3D G3DSA:3.40.190.10 163 262 2.6E-39 T 12-10-2018 Vc3S01_2306 838477ed3549d99a21f23dd634174812 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 1.7E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_2306 838477ed3549d99a21f23dd634174812 293 Gene3D G3DSA:1.10.10.10 6 92 1.2E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_2306 838477ed3549d99a21f23dd634174812 293 SUPERFAMILY SSF53850 92 292 2.53E-29 T 12-10-2018 Vc3S01_2306 838477ed3549d99a21f23dd634174812 293 Gene3D G3DSA:3.40.190.10 103 288 2.6E-39 T 12-10-2018 Vc3S01_2306 838477ed3549d99a21f23dd634174812 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 4.4E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_2306 838477ed3549d99a21f23dd634174812 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 4.4E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_2306 838477ed3549d99a21f23dd634174812 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 4.4E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_2306 838477ed3549d99a21f23dd634174812 293 Pfam PF03466 LysR substrate binding domain 92 292 1.2E-23 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_p20039 190839235c7b40b0745524efb52480fc 501 Pfam PF00580 UvrD/REP helicase N-terminal domain 141 228 2.6E-9 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 Vc3S01_p20039 190839235c7b40b0745524efb52480fc 501 Gene3D G3DSA:3.40.50.300 1 238 4.5E-19 T 12-10-2018 Vc3S01_p20039 190839235c7b40b0745524efb52480fc 501 SUPERFAMILY SSF52540 2 462 1.23E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_p20039 190839235c7b40b0745524efb52480fc 501 Pfam PF13361 UvrD-like helicase C-terminal domain 376 460 1.7E-10 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Vc3S01_0521 d2e2f638bbcad7c124d74f17e88126fe 739 Pfam PF04607 Region found in RelA / SpoT proteins 250 359 3.0E-36 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 Vc3S01_0521 d2e2f638bbcad7c124d74f17e88126fe 739 SUPERFAMILY SSF81271 395 461 5.01E-21 T 12-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 Vc3S01_0521 d2e2f638bbcad7c124d74f17e88126fe 739 Gene3D G3DSA:1.10.3210.10 48 205 1.5E-34 T 12-10-2018 Vc3S01_0521 d2e2f638bbcad7c124d74f17e88126fe 739 SUPERFAMILY SSF81301 195 406 5.89E-62 T 12-10-2018 Vc3S01_0521 d2e2f638bbcad7c124d74f17e88126fe 739 SUPERFAMILY SSF55021 662 737 4.21E-10 T 12-10-2018 Vc3S01_0521 d2e2f638bbcad7c124d74f17e88126fe 739 Gene3D G3DSA:3.30.460.10 208 340 3.2E-48 T 12-10-2018 Vc3S01_0521 d2e2f638bbcad7c124d74f17e88126fe 739 Pfam PF13291 ACT domain 661 737 4.4E-15 T 12-10-2018 IPR002912 ACT domain Vc3S01_0521 d2e2f638bbcad7c124d74f17e88126fe 739 Gene3D G3DSA:3.30.70.260 660 739 1.1E-14 T 12-10-2018 Vc3S01_0521 d2e2f638bbcad7c124d74f17e88126fe 739 Gene3D G3DSA:3.10.20.30 396 469 4.9E-31 T 12-10-2018 IPR012675 Beta-grasp domain superfamily Vc3S01_0521 d2e2f638bbcad7c124d74f17e88126fe 739 SUPERFAMILY SSF109604 53 205 2.04E-41 T 12-10-2018 Vc3S01_0521 d2e2f638bbcad7c124d74f17e88126fe 739 SMART SM00954 250 360 2.9E-64 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 Vc3S01_0521 d2e2f638bbcad7c124d74f17e88126fe 739 Pfam PF13328 HD domain 50 190 5.8E-35 T 12-10-2018 IPR003607 HD/PDEase domain Vc3S01_0521 d2e2f638bbcad7c124d74f17e88126fe 739 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 64 737 5.8E-183 T 12-10-2018 IPR004811 RelA/SpoT family GO:0015969 Vc3S01_0521 d2e2f638bbcad7c124d74f17e88126fe 739 Pfam PF02824 TGS domain 402 461 1.0E-21 T 12-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 Vc3S01_1135 c549b4b5355889f4ef563c72c7da4190 189 SUPERFAMILY SSF159594 25 189 5.49E-27 T 12-10-2018 Vc3S01_1135 c549b4b5355889f4ef563c72c7da4190 189 Gene3D G3DSA:3.40.50.10610 16 189 3.2E-10 T 12-10-2018 Vc3S01_1135 c549b4b5355889f4ef563c72c7da4190 189 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 26 186 1.7E-36 T 12-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component Vc3S01_A1198 7f9df2ab52390ce3381208584ad46a15 331 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 56 329 2.2E-71 T 12-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 Vc3S01_A1198 7f9df2ab52390ce3381208584ad46a15 331 SUPERFAMILY SSF53187 37 330 3.64E-49 T 12-10-2018 Vc3S01_A1198 7f9df2ab52390ce3381208584ad46a15 331 PIRSF PIRSF039012 9 331 1.3E-91 T 12-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 Vc3S01_A1198 7f9df2ab52390ce3381208584ad46a15 331 Gene3D G3DSA:3.40.630.10 14 329 1.3E-69 T 12-10-2018 Vc3S01_0331 942f0b196711d544520fea9e202bd1c1 361 Hamap MF_01201 Alanine racemase. 4 360 35.315 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Vc3S01_0331 942f0b196711d544520fea9e202bd1c1 361 PRINTS PR00992 Alanine racemase signature 342 355 6.5E-72 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Vc3S01_0331 942f0b196711d544520fea9e202bd1c1 361 PRINTS PR00992 Alanine racemase signature 29 45 6.5E-72 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Vc3S01_0331 942f0b196711d544520fea9e202bd1c1 361 PRINTS PR00992 Alanine racemase signature 290 307 6.5E-72 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Vc3S01_0331 942f0b196711d544520fea9e202bd1c1 361 PRINTS PR00992 Alanine racemase signature 195 222 6.5E-72 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Vc3S01_0331 942f0b196711d544520fea9e202bd1c1 361 PRINTS PR00992 Alanine racemase signature 158 169 6.5E-72 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Vc3S01_0331 942f0b196711d544520fea9e202bd1c1 361 PRINTS PR00992 Alanine racemase signature 252 267 6.5E-72 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Vc3S01_0331 942f0b196711d544520fea9e202bd1c1 361 PRINTS PR00992 Alanine racemase signature 123 135 6.5E-72 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Vc3S01_0331 942f0b196711d544520fea9e202bd1c1 361 PRINTS PR00992 Alanine racemase signature 63 81 6.5E-72 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Vc3S01_0331 942f0b196711d544520fea9e202bd1c1 361 PRINTS PR00992 Alanine racemase signature 269 284 6.5E-72 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Vc3S01_0331 942f0b196711d544520fea9e202bd1c1 361 Pfam PF00842 Alanine racemase, C-terminal domain 236 359 2.7E-42 T 12-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Vc3S01_0331 942f0b196711d544520fea9e202bd1c1 361 SMART SM01005 236 360 9.3E-67 T 12-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Vc3S01_0331 942f0b196711d544520fea9e202bd1c1 361 Gene3D G3DSA:2.40.37.10 11 355 9.1E-134 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Vc3S01_0331 942f0b196711d544520fea9e202bd1c1 361 Pfam PF01168 Alanine racemase, N-terminal domain 11 222 3.0E-71 T 12-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Vc3S01_0331 942f0b196711d544520fea9e202bd1c1 361 TIGRFAM TIGR00492 alr: alanine racemase 6 359 9.7E-131 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Vc3S01_0331 942f0b196711d544520fea9e202bd1c1 361 SUPERFAMILY SSF51419 11 237 4.58E-72 T 12-10-2018 IPR029066 PLP-binding barrel Vc3S01_0331 942f0b196711d544520fea9e202bd1c1 361 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 34 44 - T 12-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Vc3S01_0331 942f0b196711d544520fea9e202bd1c1 361 SUPERFAMILY SSF50621 229 359 2.06E-47 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Vc3S01_0331 942f0b196711d544520fea9e202bd1c1 361 Gene3D G3DSA:3.20.20.10 13 220 9.1E-134 T 12-10-2018 IPR029066 PLP-binding barrel Vc3S01_2846 7882785dbca8ffb81226a0ee67fb9dbc 470 SUPERFAMILY SSF50800 70 167 2.97E-29 T 12-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily Vc3S01_2846 7882785dbca8ffb81226a0ee67fb9dbc 470 Pfam PF00224 Pyruvate kinase, barrel domain 1 341 3.4E-155 T 12-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Vc3S01_2846 7882785dbca8ffb81226a0ee67fb9dbc 470 Gene3D G3DSA:3.40.1380.20 336 467 3.5E-40 T 12-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Vc3S01_2846 7882785dbca8ffb81226a0ee67fb9dbc 470 Gene3D G3DSA:2.40.33.10 71 167 4.9E-148 T 12-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Vc3S01_2846 7882785dbca8ffb81226a0ee67fb9dbc 470 SUPERFAMILY SSF52935 323 469 6.8E-33 T 12-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Vc3S01_2846 7882785dbca8ffb81226a0ee67fb9dbc 470 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 12-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Vc3S01_2846 7882785dbca8ffb81226a0ee67fb9dbc 470 PRINTS PR01050 Pyruvate kinase family signature 244 268 1.5E-79 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Vc3S01_2846 7882785dbca8ffb81226a0ee67fb9dbc 470 PRINTS PR01050 Pyruvate kinase family signature 186 200 1.5E-79 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Vc3S01_2846 7882785dbca8ffb81226a0ee67fb9dbc 470 PRINTS PR01050 Pyruvate kinase family signature 59 75 1.5E-79 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Vc3S01_2846 7882785dbca8ffb81226a0ee67fb9dbc 470 PRINTS PR01050 Pyruvate kinase family signature 313 329 1.5E-79 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Vc3S01_2846 7882785dbca8ffb81226a0ee67fb9dbc 470 PRINTS PR01050 Pyruvate kinase family signature 217 243 1.5E-79 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Vc3S01_2846 7882785dbca8ffb81226a0ee67fb9dbc 470 PRINTS PR01050 Pyruvate kinase family signature 269 293 1.5E-79 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Vc3S01_2846 7882785dbca8ffb81226a0ee67fb9dbc 470 PRINTS PR01050 Pyruvate kinase family signature 294 312 1.5E-79 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Vc3S01_2846 7882785dbca8ffb81226a0ee67fb9dbc 470 SUPERFAMILY SSF51621 1 339 2.3E-102 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Vc3S01_2846 7882785dbca8ffb81226a0ee67fb9dbc 470 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 469 8.1E-187 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Vc3S01_2846 7882785dbca8ffb81226a0ee67fb9dbc 470 Gene3D G3DSA:3.20.20.60 4 332 4.9E-148 T 12-10-2018 Vc3S01_2846 7882785dbca8ffb81226a0ee67fb9dbc 470 Pfam PF02887 Pyruvate kinase, alpha/beta domain 356 468 1.3E-26 T 12-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Vc3S01_2283 712664de70023659a89afc8a00427f7b 483 PIRSF PIRSF006603 2 448 6.0E-77 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Vc3S01_2283 712664de70023659a89afc8a00427f7b 483 Pfam PF01554 MatE 243 402 4.3E-17 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Vc3S01_2283 712664de70023659a89afc8a00427f7b 483 Pfam PF01554 MatE 29 184 9.6E-24 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Vc3S01_2283 712664de70023659a89afc8a00427f7b 483 TIGRFAM TIGR00797 matE: MATE efflux family protein 28 406 9.0E-56 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Vc3S01_A0661 3683204c2fdd166d34d1e1df1b110e47 315 Pfam PF09077 Mu B transposition protein, C terminal 236 311 2.6E-23 T 12-10-2018 IPR009084 B transposition protein, C-terminal GO:0003677|GO:0006313 Vc3S01_A0661 3683204c2fdd166d34d1e1df1b110e47 315 Gene3D G3DSA:1.10.1180.10 235 315 1.2E-23 T 12-10-2018 IPR036733 B transposition protein, C-terminal domain superfamily GO:0003677|GO:0006313 Vc3S01_A0661 3683204c2fdd166d34d1e1df1b110e47 315 Pfam PF13401 AAA domain 105 221 1.4E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_A0661 3683204c2fdd166d34d1e1df1b110e47 315 SUPERFAMILY SSF47413 21 72 7.62E-5 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Vc3S01_A0661 3683204c2fdd166d34d1e1df1b110e47 315 SUPERFAMILY SSF52540 103 259 1.6E-11 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A0661 3683204c2fdd166d34d1e1df1b110e47 315 Gene3D G3DSA:1.10.260.40 12 71 6.8E-10 T 12-10-2018 Vc3S01_A0661 3683204c2fdd166d34d1e1df1b110e47 315 Gene3D G3DSA:3.40.50.300 72 226 1.5E-8 T 12-10-2018 Vc3S01_A0661 3683204c2fdd166d34d1e1df1b110e47 315 SUPERFAMILY SSF47681 235 314 5.89E-24 T 12-10-2018 IPR036733 B transposition protein, C-terminal domain superfamily GO:0003677|GO:0006313 Vc3S01_0082 a44b82194ef2ee637d10d96e3ea87f43 617 Gene3D G3DSA:3.40.1670.10 479 583 2.5E-25 T 12-10-2018 Vc3S01_0082 a44b82194ef2ee637d10d96e3ea87f43 617 Gene3D G3DSA:3.40.1670.10 337 453 1.6E-46 T 12-10-2018 Vc3S01_0082 a44b82194ef2ee637d10d96e3ea87f43 617 SUPERFAMILY SSF50475 3 322 8.24E-123 T 12-10-2018 Vc3S01_0082 a44b82194ef2ee637d10d96e3ea87f43 617 SUPERFAMILY SSF143968 473 615 3.27E-37 T 12-10-2018 Vc3S01_0082 a44b82194ef2ee637d10d96e3ea87f43 617 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 454 1.4E-165 T 12-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 Vc3S01_0082 a44b82194ef2ee637d10d96e3ea87f43 617 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 473 569 1.8E-21 T 12-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 Vc3S01_0082 a44b82194ef2ee637d10d96e3ea87f43 617 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 431 8.5E-163 T 12-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 Vc3S01_0082 a44b82194ef2ee637d10d96e3ea87f43 617 SUPERFAMILY SSF143968 323 461 4.71E-53 T 12-10-2018 Vc3S01_0082 a44b82194ef2ee637d10d96e3ea87f43 617 Gene3D G3DSA:1.20.5.570 584 617 1.3E-15 T 12-10-2018 Vc3S01_2471 e8cb4bc28f0ef1ea4a0cc81cda33f990 437 Pfam PF07559 Flagellar basal body protein FlaE 181 317 2.8E-22 T 12-10-2018 IPR011491 Flagellar hook protein FlgE Vc3S01_2471 e8cb4bc28f0ef1ea4a0cc81cda33f990 437 Pfam PF00460 Flagella basal body rod protein 3 32 6.3E-10 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Vc3S01_2471 e8cb4bc28f0ef1ea4a0cc81cda33f990 437 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 2 419 2.3E-95 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Vc3S01_2471 e8cb4bc28f0ef1ea4a0cc81cda33f990 437 SUPERFAMILY SSF117143 78 398 8.63E-69 T 12-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like Vc3S01_2471 e8cb4bc28f0ef1ea4a0cc81cda33f990 437 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 8 28 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site Vc3S01_2471 e8cb4bc28f0ef1ea4a0cc81cda33f990 437 Gene3D G3DSA:2.60.98.20 154 319 2.9E-22 T 12-10-2018 IPR037058 Flagellar hook protein FlgE superfamily Vc3S01_2471 e8cb4bc28f0ef1ea4a0cc81cda33f990 437 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 358 436 3.7E-16 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Vc3S01_A0371 6e2bba1a06df25d6f887b5a0b74a105c 339 SUPERFAMILY SSF48029 122 330 3.53E-53 T 12-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical Vc3S01_A0371 6e2bba1a06df25d6f887b5a0b74a105c 339 Pfam PF14841 FliG middle domain 123 196 4.5E-20 T 12-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain Vc3S01_A0371 6e2bba1a06df25d6f887b5a0b74a105c 339 Pfam PF14842 FliG N-terminal domain 12 109 4.1E-23 T 12-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain Vc3S01_A0371 6e2bba1a06df25d6f887b5a0b74a105c 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 12 28 3.2E-29 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Vc3S01_A0371 6e2bba1a06df25d6f887b5a0b74a105c 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 278 304 3.2E-29 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Vc3S01_A0371 6e2bba1a06df25d6f887b5a0b74a105c 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 121 144 3.2E-29 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Vc3S01_A0371 6e2bba1a06df25d6f887b5a0b74a105c 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 254 274 3.2E-29 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Vc3S01_A0371 6e2bba1a06df25d6f887b5a0b74a105c 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 41 67 3.2E-29 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Vc3S01_A0371 6e2bba1a06df25d6f887b5a0b74a105c 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 232 252 3.2E-29 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Vc3S01_A0371 6e2bba1a06df25d6f887b5a0b74a105c 339 Gene3D G3DSA:1.10.220.30 202 335 5.0E-25 T 12-10-2018 Vc3S01_A0371 6e2bba1a06df25d6f887b5a0b74a105c 339 Gene3D G3DSA:1.10.220.30 5 93 1.5E-18 T 12-10-2018 Vc3S01_A0371 6e2bba1a06df25d6f887b5a0b74a105c 339 Pfam PF01706 FliG C-terminal domain 224 330 5.3E-24 T 12-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal Vc3S01_A0371 6e2bba1a06df25d6f887b5a0b74a105c 339 Gene3D G3DSA:1.10.220.30 96 199 2.0E-22 T 12-10-2018 Vc3S01_A0371 6e2bba1a06df25d6f887b5a0b74a105c 339 SUPERFAMILY SSF48029 15 114 4.97E-18 T 12-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical Vc3S01_2910 98d05600191438bd00f5b7f50869fc5c 459 Pfam PF03880 DbpA RNA binding domain 386 456 4.7E-21 T 12-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain Vc3S01_2910 98d05600191438bd00f5b7f50869fc5c 459 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site Vc3S01_2910 98d05600191438bd00f5b7f50869fc5c 459 Pfam PF00271 Helicase conserved C-terminal domain 231 338 1.8E-27 T 12-10-2018 IPR001650 Helicase, C-terminal Vc3S01_2910 98d05600191438bd00f5b7f50869fc5c 459 Gene3D G3DSA:3.40.50.300 211 388 8.7E-45 T 12-10-2018 Vc3S01_2910 98d05600191438bd00f5b7f50869fc5c 459 Gene3D G3DSA:3.40.50.300 2 210 1.0E-74 T 12-10-2018 Vc3S01_2910 98d05600191438bd00f5b7f50869fc5c 459 SMART SM00487 23 220 8.0E-56 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Vc3S01_2910 98d05600191438bd00f5b7f50869fc5c 459 SMART SM00490 257 338 1.1E-26 T 12-10-2018 IPR001650 Helicase, C-terminal Vc3S01_2910 98d05600191438bd00f5b7f50869fc5c 459 SUPERFAMILY SSF52540 73 357 8.05E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2910 98d05600191438bd00f5b7f50869fc5c 459 Pfam PF00270 DEAD/DEAH box helicase 28 194 1.6E-46 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Vc3S01_2910 98d05600191438bd00f5b7f50869fc5c 459 Gene3D G3DSA:3.30.70.330 389 458 3.4E-18 T 12-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily Vc3S01_2878 077711d03c0050bada1b5a44f0618de8 156 SUPERFAMILY SSF55252 82 151 3.92E-19 T 12-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 Vc3S01_2878 077711d03c0050bada1b5a44f0618de8 156 TIGRFAM TIGR01529 argR_whole: arginine repressor 10 151 5.4E-44 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 Vc3S01_2878 077711d03c0050bada1b5a44f0618de8 156 SUPERFAMILY SSF46785 3 77 3.36E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_2878 077711d03c0050bada1b5a44f0618de8 156 Gene3D G3DSA:3.30.1360.40 75 156 5.6E-34 T 12-10-2018 Vc3S01_2878 077711d03c0050bada1b5a44f0618de8 156 Hamap MF_00173 Arginine repressor [argR]. 1 155 59.828 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 Vc3S01_2878 077711d03c0050bada1b5a44f0618de8 156 Pfam PF02863 Arginine repressor, C-terminal domain 82 147 8.8E-22 T 12-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 Vc3S01_2878 077711d03c0050bada1b5a44f0618de8 156 PRINTS PR01467 Bacterial arginine repressor signature 25 38 1.7E-24 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 Vc3S01_2878 077711d03c0050bada1b5a44f0618de8 156 PRINTS PR01467 Bacterial arginine repressor signature 42 57 1.7E-24 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 Vc3S01_2878 077711d03c0050bada1b5a44f0618de8 156 PRINTS PR01467 Bacterial arginine repressor signature 121 136 1.7E-24 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 Vc3S01_2878 077711d03c0050bada1b5a44f0618de8 156 PRINTS PR01467 Bacterial arginine repressor signature 90 103 1.7E-24 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 Vc3S01_2878 077711d03c0050bada1b5a44f0618de8 156 Gene3D G3DSA:1.10.10.10 1 74 7.9E-35 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_2878 077711d03c0050bada1b5a44f0618de8 156 Pfam PF01316 Arginine repressor, DNA binding domain 6 74 8.6E-24 T 12-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 Vc3S01_2878 077711d03c0050bada1b5a44f0618de8 156 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 89 146 2.0E-20 T 12-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 Vc3S01_2272 7fe44c9f917b434a3af678b64cd2c31e 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 290 312 4.2E-13 T 12-10-2018 Vc3S01_2272 7fe44c9f917b434a3af678b64cd2c31e 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 129 4.2E-13 T 12-10-2018 Vc3S01_2272 7fe44c9f917b434a3af678b64cd2c31e 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 167 185 4.2E-13 T 12-10-2018 Vc3S01_2272 7fe44c9f917b434a3af678b64cd2c31e 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 4.2E-13 T 12-10-2018 Vc3S01_2272 7fe44c9f917b434a3af678b64cd2c31e 429 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 333 4.9E-62 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Vc3S01_2272 7fe44c9f917b434a3af678b64cd2c31e 429 SUPERFAMILY SSF51905 3 347 3.67E-28 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_2272 7fe44c9f917b434a3af678b64cd2c31e 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 305 312 4.2E-7 T 12-10-2018 Vc3S01_2272 7fe44c9f917b434a3af678b64cd2c31e 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 167 192 4.2E-7 T 12-10-2018 Vc3S01_2272 7fe44c9f917b434a3af678b64cd2c31e 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 4.2E-7 T 12-10-2018 Vc3S01_2272 7fe44c9f917b434a3af678b64cd2c31e 429 Gene3D G3DSA:3.50.50.100 1 406 9.3E-114 T 12-10-2018 Vc3S01_2681 5c42297bec395dad460620ac0f43062d 857 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 204 320 4.8E-13 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Vc3S01_2681 5c42297bec395dad460620ac0f43062d 857 Gene3D G3DSA:1.10.8.60 766 857 2.0E-27 T 12-10-2018 Vc3S01_2681 5c42297bec395dad460620ac0f43062d 857 Gene3D G3DSA:3.40.50.300 550 764 3.8E-89 T 12-10-2018 Vc3S01_2681 5c42297bec395dad460620ac0f43062d 857 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 12-10-2018 IPR028299 ClpA/B, conserved site 2 Vc3S01_2681 5c42297bec395dad460620ac0f43062d 857 Gene3D G3DSA:3.40.50.300 158 347 2.0E-74 T 12-10-2018 Vc3S01_2681 5c42297bec395dad460620ac0f43062d 857 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 845 1.4E-27 T 12-10-2018 IPR019489 Clp ATPase, C-terminal Vc3S01_2681 5c42297bec395dad460620ac0f43062d 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 2.2E-14 T 12-10-2018 IPR004176 Clp, N-terminal Vc3S01_2681 5c42297bec395dad460620ac0f43062d 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 1.4E-11 T 12-10-2018 IPR004176 Clp, N-terminal Vc3S01_2681 5c42297bec395dad460620ac0f43062d 857 SUPERFAMILY SSF81923 4 156 5.1E-43 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Vc3S01_2681 5c42297bec395dad460620ac0f43062d 857 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 759 7.2E-57 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Vc3S01_2681 5c42297bec395dad460620ac0f43062d 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 4.3E-42 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 Vc3S01_2681 5c42297bec395dad460620ac0f43062d 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 4.3E-42 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 Vc3S01_2681 5c42297bec395dad460620ac0f43062d 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 4.3E-42 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 Vc3S01_2681 5c42297bec395dad460620ac0f43062d 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 4.3E-42 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 Vc3S01_2681 5c42297bec395dad460620ac0f43062d 857 Gene3D G3DSA:1.10.1780.10 1 148 9.9E-34 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Vc3S01_2681 5c42297bec395dad460620ac0f43062d 857 SMART SM00382 198 344 3.0E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_2681 5c42297bec395dad460620ac0f43062d 857 SMART SM00382 597 763 2.0E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_2681 5c42297bec395dad460620ac0f43062d 857 SMART SM01086 766 855 7.9E-37 T 12-10-2018 IPR019489 Clp ATPase, C-terminal Vc3S01_2681 5c42297bec395dad460620ac0f43062d 857 SUPERFAMILY SSF52540 546 853 2.74E-84 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2681 5c42297bec395dad460620ac0f43062d 857 SUPERFAMILY SSF52540 159 545 4.8E-100 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2681 5c42297bec395dad460620ac0f43062d 857 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 12-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 Vc3S01_2681 5c42297bec395dad460620ac0f43062d 857 Gene3D G3DSA:3.40.50.300 348 544 1.3E-66 T 12-10-2018 Vc3S01_2681 5c42297bec395dad460620ac0f43062d 857 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 854 0.0 T 12-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 Vc3S01_0756 90dc2002bac70579e28f44b792bff1e5 357 Pfam PF11799 impB/mucB/samB family C-terminal domain 244 344 1.2E-6 T 12-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Vc3S01_0756 90dc2002bac70579e28f44b792bff1e5 357 Gene3D G3DSA:3.30.70.270 76 176 3.4E-38 T 12-10-2018 Vc3S01_0756 90dc2002bac70579e28f44b792bff1e5 357 SUPERFAMILY SSF56672 6 241 4.45E-92 T 12-10-2018 Vc3S01_0756 90dc2002bac70579e28f44b792bff1e5 357 Pfam PF11798 IMS family HHH motif 173 203 5.2E-6 T 12-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 Vc3S01_0756 90dc2002bac70579e28f44b792bff1e5 357 Hamap MF_01113 DNA polymerase IV [dinB]. 8 356 36.917 T 12-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 Vc3S01_0756 90dc2002bac70579e28f44b792bff1e5 357 Pfam PF00817 impB/mucB/samB family 14 161 8.4E-49 T 12-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Vc3S01_0756 90dc2002bac70579e28f44b792bff1e5 357 Gene3D G3DSA:1.10.150.20 177 235 5.2E-15 T 12-10-2018 Vc3S01_0756 90dc2002bac70579e28f44b792bff1e5 357 Gene3D G3DSA:3.30.1490.100 244 356 7.2E-26 T 12-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Vc3S01_0756 90dc2002bac70579e28f44b792bff1e5 357 SUPERFAMILY SSF100879 248 356 1.28E-24 T 12-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Vc3S01_0756 90dc2002bac70579e28f44b792bff1e5 357 Gene3D G3DSA:2.30.40.20 18 75 9.9E-27 T 12-10-2018 Vc3S01_2016 cf46e930ef1f8b5ee027916515e91cd3 266 Gene3D G3DSA:2.40.50.100 2 111 1.1E-62 T 12-10-2018 Vc3S01_2016 cf46e930ef1f8b5ee027916515e91cd3 266 Gene3D G3DSA:1.10.287.470 13 72 1.1E-62 T 12-10-2018 Vc3S01_2016 cf46e930ef1f8b5ee027916515e91cd3 266 Pfam PF13437 HlyD family secretion protein 77 167 5.0E-11 T 12-10-2018 Vc3S01_2016 cf46e930ef1f8b5ee027916515e91cd3 266 Gene3D G3DSA:2.40.30.170 112 190 1.1E-62 T 12-10-2018 Vc3S01_2016 cf46e930ef1f8b5ee027916515e91cd3 266 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 1 260 2.7E-70 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Vc3S01_2016 cf46e930ef1f8b5ee027916515e91cd3 266 SUPERFAMILY SSF111369 1 187 8.76E-26 T 12-10-2018 Vc3S01_2016 cf46e930ef1f8b5ee027916515e91cd3 266 Gene3D G3DSA:2.40.420.20 191 257 1.1E-62 T 12-10-2018 Vc3S01_0615 2e7e602e99b1859f20a86ef18c00c72d 395 SMART SM00363 334 393 0.0078 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_0615 2e7e602e99b1859f20a86ef18c00c72d 395 SUPERFAMILY SSF55174 297 394 9.57E-16 T 12-10-2018 Vc3S01_0615 2e7e602e99b1859f20a86ef18c00c72d 395 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Vc3S01_0615 2e7e602e99b1859f20a86ef18c00c72d 395 Gene3D G3DSA:3.40.50.620 5 217 7.7E-73 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Vc3S01_0615 2e7e602e99b1859f20a86ef18c00c72d 395 SUPERFAMILY SSF52374 6 316 5.87E-98 T 12-10-2018 Vc3S01_0615 2e7e602e99b1859f20a86ef18c00c72d 395 Pfam PF00579 tRNA synthetases class I (W and Y) 30 316 6.0E-79 T 12-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Vc3S01_0615 2e7e602e99b1859f20a86ef18c00c72d 395 Gene3D G3DSA:1.10.240.10 218 325 9.0E-34 T 12-10-2018 Vc3S01_0615 2e7e602e99b1859f20a86ef18c00c72d 395 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 2 394 48.291 T 12-10-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 Vc3S01_0615 2e7e602e99b1859f20a86ef18c00c72d 395 Gene3D G3DSA:3.10.290.10 326 394 3.3E-15 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Vc3S01_0615 2e7e602e99b1859f20a86ef18c00c72d 395 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 4 395 5.2E-126 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Vc3S01_0615 2e7e602e99b1859f20a86ef18c00c72d 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 1.3E-24 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Vc3S01_0615 2e7e602e99b1859f20a86ef18c00c72d 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 1.3E-24 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Vc3S01_0615 2e7e602e99b1859f20a86ef18c00c72d 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 178 200 1.3E-24 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Vc3S01_0615 2e7e602e99b1859f20a86ef18c00c72d 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 211 223 1.3E-24 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Vc3S01_0182 ec53928eadadfb73b80b820b0ca7aeda 711 PIRSF PIRSF009393 1 711 6.6E-289 T 12-10-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 Vc3S01_0182 ec53928eadadfb73b80b820b0ca7aeda 711 Gene3D G3DSA:3.40.50.2300 1 129 1.1E-52 T 12-10-2018 Vc3S01_0182 ec53928eadadfb73b80b820b0ca7aeda 711 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 570 700 2.9E-46 T 12-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 Vc3S01_0182 ec53928eadadfb73b80b820b0ca7aeda 711 SUPERFAMILY SSF53383 130 562 2.41E-106 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Vc3S01_0182 ec53928eadadfb73b80b820b0ca7aeda 711 Gene3D G3DSA:3.90.100.10 595 711 2.4E-46 T 12-10-2018 Vc3S01_0182 ec53928eadadfb73b80b820b0ca7aeda 711 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 14 124 1.2E-28 T 12-10-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 Vc3S01_0182 ec53928eadadfb73b80b820b0ca7aeda 711 Gene3D G3DSA:3.90.1150.10 425 594 1.3E-70 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Vc3S01_0182 ec53928eadadfb73b80b820b0ca7aeda 711 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 130 545 1.5E-189 T 12-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 Vc3S01_0182 ec53928eadadfb73b80b820b0ca7aeda 711 Gene3D G3DSA:3.40.640.10 130 424 4.0E-91 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Vc3S01_0182 ec53928eadadfb73b80b820b0ca7aeda 711 SUPERFAMILY SSF55904 568 708 7.85E-43 T 12-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 Vc3S01_0182 ec53928eadadfb73b80b820b0ca7aeda 711 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 362 376 - T 12-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 Vc3S01_A1135 8282b409ce4d181ea954526df3bc8448 706 ProSitePatterns PS00850 Glycine radical domain signature. 676 684 - T 12-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site Vc3S01_A1135 8282b409ce4d181ea954526df3bc8448 706 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 115 705 1.2E-197 T 12-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 Vc3S01_A1135 8282b409ce4d181ea954526df3bc8448 706 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 116 705 1.3E-179 T 12-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 Vc3S01_A1135 8282b409ce4d181ea954526df3bc8448 706 Gene3D G3DSA:3.20.70.20 121 687 5.5E-231 T 12-10-2018 Vc3S01_A1135 8282b409ce4d181ea954526df3bc8448 706 Pfam PF03477 ATP cone domain 4 89 2.5E-22 T 12-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 Vc3S01_A1135 8282b409ce4d181ea954526df3bc8448 706 SUPERFAMILY SSF51998 121 687 6.41E-191 T 12-10-2018 Vc3S01_A0735 1e5cc3a2ea56c888dbc8890aab6e7720 192 Gene3D G3DSA:1.10.3820.10 11 188 5.6E-33 T 12-10-2018 IPR038266 NapC/NirT cytochrome c superfamily Vc3S01_A0735 1e5cc3a2ea56c888dbc8890aab6e7720 192 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 15 185 3.5E-70 T 12-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal Vc3S01_A0735 1e5cc3a2ea56c888dbc8890aab6e7720 192 PIRSF PIRSF000013 1 192 1.1E-90 T 12-10-2018 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 Vc3S01_A0735 1e5cc3a2ea56c888dbc8890aab6e7720 192 SUPERFAMILY SSF48695 16 191 1.23E-54 T 12-10-2018 IPR036280 Multiheme cytochrome superfamily Vc3S01_0090 1fe7f89c0d06e36c441866041cb3511f 312 Gene3D G3DSA:3.30.160.40 222 307 2.1E-27 T 12-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Vc3S01_0090 1fe7f89c0d06e36c441866041cb3511f 312 PRINTS PR00151 Porphobilinogen deaminase signature 125 142 1.0E-47 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Vc3S01_0090 1fe7f89c0d06e36c441866041cb3511f 312 PRINTS PR00151 Porphobilinogen deaminase signature 46 66 1.0E-47 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Vc3S01_0090 1fe7f89c0d06e36c441866041cb3511f 312 PRINTS PR00151 Porphobilinogen deaminase signature 77 96 1.0E-47 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Vc3S01_0090 1fe7f89c0d06e36c441866041cb3511f 312 PRINTS PR00151 Porphobilinogen deaminase signature 144 161 1.0E-47 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Vc3S01_0090 1fe7f89c0d06e36c441866041cb3511f 312 PRINTS PR00151 Porphobilinogen deaminase signature 231 248 1.0E-47 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Vc3S01_0090 1fe7f89c0d06e36c441866041cb3511f 312 Gene3D G3DSA:3.40.190.10 7 211 1.5E-85 T 12-10-2018 Vc3S01_0090 1fe7f89c0d06e36c441866041cb3511f 312 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 7 213 4.4E-80 T 12-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Vc3S01_0090 1fe7f89c0d06e36c441866041cb3511f 312 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 6 298 40.132 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Vc3S01_0090 1fe7f89c0d06e36c441866041cb3511f 312 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 228 296 1.2E-19 T 12-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Vc3S01_0090 1fe7f89c0d06e36c441866041cb3511f 312 SUPERFAMILY SSF53850 6 220 4.56E-86 T 12-10-2018 Vc3S01_0090 1fe7f89c0d06e36c441866041cb3511f 312 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 232 248 - T 12-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Vc3S01_0090 1fe7f89c0d06e36c441866041cb3511f 312 SUPERFAMILY SSF54782 221 310 1.83E-27 T 12-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Vc3S01_0090 1fe7f89c0d06e36c441866041cb3511f 312 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 7 298 4.5E-115 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Vc3S01_0090 1fe7f89c0d06e36c441866041cb3511f 312 PIRSF PIRSF001438 1 312 1.5E-122 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Vc3S01_0090 1fe7f89c0d06e36c441866041cb3511f 312 Gene3D G3DSA:3.40.190.10 104 203 1.5E-85 T 12-10-2018 Vc3S01_A1762 12d22b2becb22559c70ba8d4f4b5b41e 818 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 36 546 3.4E-110 T 12-10-2018 IPR005887 Alpha-1,2-mannosidase, putative Vc3S01_A1762 12d22b2becb22559c70ba8d4f4b5b41e 818 Gene3D G3DSA:1.20.1050.60 373 477 3.6E-215 T 12-10-2018 Vc3S01_A1762 12d22b2becb22559c70ba8d4f4b5b41e 818 Pfam PF07971 Glycosyl hydrolase family 92 262 808 3.2E-144 T 12-10-2018 IPR012939 Glycosyl hydrolase family 92 Vc3S01_A1762 12d22b2becb22559c70ba8d4f4b5b41e 818 SUPERFAMILY SSF48208 284 792 1.98E-39 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Vc3S01_A1762 12d22b2becb22559c70ba8d4f4b5b41e 818 Gene3D G3DSA:3.30.2080.10 319 809 3.6E-215 T 12-10-2018 Vc3S01_A1762 12d22b2becb22559c70ba8d4f4b5b41e 818 Gene3D G3DSA:2.70.98.10 42 372 3.6E-215 T 12-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 Vc3S01_A1762 12d22b2becb22559c70ba8d4f4b5b41e 818 Gene3D G3DSA:1.20.1610.10 478 684 3.6E-215 T 12-10-2018 Vc3S01_1202 e648f1bc27ef025bedeb6234eaa8a27d 202 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 4 188 2.9E-54 T 12-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Vc3S01_1202 e648f1bc27ef025bedeb6234eaa8a27d 202 Pfam PF00117 Glutamine amidotransferase class-I 6 186 2.7E-47 T 12-10-2018 IPR017926 Glutamine amidotransferase Vc3S01_1202 e648f1bc27ef025bedeb6234eaa8a27d 202 SUPERFAMILY SSF52317 2 192 1.94E-47 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Vc3S01_1202 e648f1bc27ef025bedeb6234eaa8a27d 202 Gene3D G3DSA:3.40.50.880 1 193 3.8E-59 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Vc3S01_1202 e648f1bc27ef025bedeb6234eaa8a27d 202 PRINTS PR00097 Anthranilate synthase component II signature 79 90 1.5E-34 T 12-10-2018 Vc3S01_1202 e648f1bc27ef025bedeb6234eaa8a27d 202 PRINTS PR00097 Anthranilate synthase component II signature 166 179 1.5E-34 T 12-10-2018 Vc3S01_1202 e648f1bc27ef025bedeb6234eaa8a27d 202 PRINTS PR00097 Anthranilate synthase component II signature 104 112 1.5E-34 T 12-10-2018 Vc3S01_1202 e648f1bc27ef025bedeb6234eaa8a27d 202 PRINTS PR00097 Anthranilate synthase component II signature 4 18 1.5E-34 T 12-10-2018 Vc3S01_1202 e648f1bc27ef025bedeb6234eaa8a27d 202 PRINTS PR00097 Anthranilate synthase component II signature 124 136 1.5E-34 T 12-10-2018 Vc3S01_1202 e648f1bc27ef025bedeb6234eaa8a27d 202 PRINTS PR00097 Anthranilate synthase component II signature 52 61 1.5E-34 T 12-10-2018 Vc3S01_1202 e648f1bc27ef025bedeb6234eaa8a27d 202 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 49 63 1.3E-5 T 12-10-2018 Vc3S01_1202 e648f1bc27ef025bedeb6234eaa8a27d 202 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 79 95 1.3E-5 T 12-10-2018 Vc3S01_1202 e648f1bc27ef025bedeb6234eaa8a27d 202 PRINTS PR00096 Glutamine amidotransferase superfamily signature 166 179 2.2E-13 T 12-10-2018 Vc3S01_1202 e648f1bc27ef025bedeb6234eaa8a27d 202 PRINTS PR00096 Glutamine amidotransferase superfamily signature 79 90 2.2E-13 T 12-10-2018 Vc3S01_1202 e648f1bc27ef025bedeb6234eaa8a27d 202 PRINTS PR00096 Glutamine amidotransferase superfamily signature 52 61 2.2E-13 T 12-10-2018 Vc3S01_p20053 1384ef01274e11fc99185788270bb622 414 Gene3D G3DSA:3.40.50.300 118 413 2.0E-56 T 12-10-2018 Vc3S01_p20053 1384ef01274e11fc99185788270bb622 414 SUPERFAMILY SSF52540 118 409 9.51E-32 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_p20053 1384ef01274e11fc99185788270bb622 414 Pfam PF13614 AAA domain 119 309 2.7E-24 T 12-10-2018 IPR025669 AAA domain Vc3S01_2199 88bb06b67acfc66ff677a9405e12af10 592 Gene3D G3DSA:3.30.930.10 118 578 6.2E-196 T 12-10-2018 Vc3S01_2199 88bb06b67acfc66ff677a9405e12af10 592 SUPERFAMILY SSF50249 1 105 2.48E-34 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Vc3S01_2199 88bb06b67acfc66ff677a9405e12af10 592 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 6.6E-16 T 12-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 Vc3S01_2199 88bb06b67acfc66ff677a9405e12af10 592 Gene3D G3DSA:2.40.50.140 1 106 8.8E-35 T 12-10-2018 Vc3S01_2199 88bb06b67acfc66ff677a9405e12af10 592 SUPERFAMILY SSF55261 288 419 6.54E-47 T 12-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 Vc3S01_2199 88bb06b67acfc66ff677a9405e12af10 592 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 583 1.8E-265 T 12-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 Vc3S01_2199 88bb06b67acfc66ff677a9405e12af10 592 SUPERFAMILY SSF55681 108 582 5.94E-101 T 12-10-2018 Vc3S01_2199 88bb06b67acfc66ff677a9405e12af10 592 Pfam PF00152 tRNA synthetases class II (D, K and N) 117 558 2.6E-104 T 12-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Vc3S01_2199 88bb06b67acfc66ff677a9405e12af10 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 2.7E-26 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Vc3S01_2199 88bb06b67acfc66ff677a9405e12af10 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 518 532 2.7E-26 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Vc3S01_2199 88bb06b67acfc66ff677a9405e12af10 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 2.7E-26 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Vc3S01_2199 88bb06b67acfc66ff677a9405e12af10 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 474 490 2.7E-26 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Vc3S01_2199 88bb06b67acfc66ff677a9405e12af10 592 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 584 33.228 T 12-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 Vc3S01_2199 88bb06b67acfc66ff677a9405e12af10 592 Gene3D G3DSA:3.30.1360.30 271 420 6.2E-196 T 12-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 Vc3S01_2199 88bb06b67acfc66ff677a9405e12af10 592 Pfam PF02938 GAD domain 307 406 1.8E-30 T 12-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 Vc3S01_2337 270a32d2075a2e5dab2527559ae4c0e0 411 Pfam PF00271 Helicase conserved C-terminal domain 233 338 1.1E-26 T 12-10-2018 IPR001650 Helicase, C-terminal Vc3S01_2337 270a32d2075a2e5dab2527559ae4c0e0 411 SUPERFAMILY SSF52540 74 359 6.99E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2337 270a32d2075a2e5dab2527559ae4c0e0 411 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site Vc3S01_2337 270a32d2075a2e5dab2527559ae4c0e0 411 SMART SM00490 257 338 1.4E-29 T 12-10-2018 IPR001650 Helicase, C-terminal Vc3S01_2337 270a32d2075a2e5dab2527559ae4c0e0 411 Gene3D G3DSA:3.40.50.300 1 216 1.3E-73 T 12-10-2018 Vc3S01_2337 270a32d2075a2e5dab2527559ae4c0e0 411 Pfam PF00270 DEAD/DEAH box helicase 25 194 7.7E-48 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Vc3S01_2337 270a32d2075a2e5dab2527559ae4c0e0 411 SMART SM00487 20 221 7.9E-60 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Vc3S01_2337 270a32d2075a2e5dab2527559ae4c0e0 411 Gene3D G3DSA:3.40.50.300 217 372 8.0E-45 T 12-10-2018 Vc3S01_1075 28905bda377ff73709fc9b6b483847c9 528 TIGRFAM TIGR00774 NhaB: Na+/H+ antiporter NhaB 1 515 0.0 T 12-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 Vc3S01_1075 28905bda377ff73709fc9b6b483847c9 528 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 1 514 2.3E-302 T 12-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 Vc3S01_1075 28905bda377ff73709fc9b6b483847c9 528 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 528 376.825 T 12-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 Vc3S01_2279 5a1279c413ac5695c08034b5365c240e 655 SUPERFAMILY SSF58104 346 655 2.35E-73 T 12-10-2018 Vc3S01_2279 5a1279c413ac5695c08034b5365c240e 655 SMART SM00304 326 378 8.8E-5 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Vc3S01_2279 5a1279c413ac5695c08034b5365c240e 655 SMART SM00283 393 654 1.1E-74 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Vc3S01_2279 5a1279c413ac5695c08034b5365c240e 655 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 407 436 1.1E-5 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Vc3S01_2279 5a1279c413ac5695c08034b5365c240e 655 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 520 549 1.1E-5 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Vc3S01_2279 5a1279c413ac5695c08034b5365c240e 655 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 462 621 1.0E-43 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Vc3S01_2279 5a1279c413ac5695c08034b5365c240e 655 Gene3D G3DSA:1.10.287.950 326 655 3.8E-71 T 12-10-2018 Vc3S01_A0956 ee24afa033240beac4d27a804054069c 191 SUPERFAMILY SSF46689 2 65 2.82E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_A0956 ee24afa033240beac4d27a804054069c 191 Gene3D G3DSA:1.10.357.10 72 189 3.7E-14 T 12-10-2018 Vc3S01_A0956 ee24afa033240beac4d27a804054069c 191 SUPERFAMILY SSF48498 83 174 1.97E-13 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Vc3S01_A0956 ee24afa033240beac4d27a804054069c 191 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 56 9.5E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Vc3S01_A0956 ee24afa033240beac4d27a804054069c 191 Gene3D G3DSA:1.10.10.60 1 66 5.1E-21 T 12-10-2018 Vc3S01_2930 d1cd0ecc56eb32bf76547d6a1743ca81 179 Gene3D G3DSA:3.30.1440.10 1 179 1.5E-80 T 12-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_2930 d1cd0ecc56eb32bf76547d6a1743ca81 179 Pfam PF00281 Ribosomal protein L5 24 80 3.5E-29 T 12-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_2930 d1cd0ecc56eb32bf76547d6a1743ca81 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 1.1E-40 T 12-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_2930 d1cd0ecc56eb32bf76547d6a1743ca81 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 44.911 T 12-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_2930 d1cd0ecc56eb32bf76547d6a1743ca81 179 SUPERFAMILY SSF55282 4 179 1.77E-78 T 12-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_2930 d1cd0ecc56eb32bf76547d6a1743ca81 179 PIRSF PIRSF002161 1 179 1.9E-66 T 12-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_2930 d1cd0ecc56eb32bf76547d6a1743ca81 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 12-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_2506 39d2b564b6fc56f05c96278f1000db6a 212 SUPERFAMILY SSF89392 27 210 2.24E-49 T 12-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX Vc3S01_2506 39d2b564b6fc56f05c96278f1000db6a 212 Pfam PF03550 Outer membrane lipoprotein LolB 52 208 8.4E-43 T 12-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 Vc3S01_2506 39d2b564b6fc56f05c96278f1000db6a 212 Gene3D G3DSA:2.50.20.10 32 211 3.0E-51 T 12-10-2018 Vc3S01_2506 39d2b564b6fc56f05c96278f1000db6a 212 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 13 209 3.8E-38 T 12-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 Vc3S01_2506 39d2b564b6fc56f05c96278f1000db6a 212 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 11 210 26.664 T 12-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 Vc3S01_A0244 9c62fd23a8bc02f4b5b9335a53536a35 449 SUPERFAMILY SSF52172 6 192 5.27E-39 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_A0244 9c62fd23a8bc02f4b5b9335a53536a35 449 Pfam PF00158 Sigma-54 interaction domain 148 311 4.5E-64 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Vc3S01_A0244 9c62fd23a8bc02f4b5b9335a53536a35 449 Pfam PF00072 Response regulator receiver domain 9 118 2.2E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A0244 9c62fd23a8bc02f4b5b9335a53536a35 449 SUPERFAMILY SSF46689 391 443 1.79E-5 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_A0244 9c62fd23a8bc02f4b5b9335a53536a35 449 Gene3D G3DSA:1.10.8.60 316 377 2.7E-13 T 12-10-2018 Vc3S01_A0244 9c62fd23a8bc02f4b5b9335a53536a35 449 SMART SM00382 168 308 3.4E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_A0244 9c62fd23a8bc02f4b5b9335a53536a35 449 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 234 249 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Vc3S01_A0244 9c62fd23a8bc02f4b5b9335a53536a35 449 Gene3D G3DSA:3.40.50.2300 4 138 3.4E-33 T 12-10-2018 Vc3S01_A0244 9c62fd23a8bc02f4b5b9335a53536a35 449 SMART SM00448 7 118 3.4E-31 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A0244 9c62fd23a8bc02f4b5b9335a53536a35 449 SUPERFAMILY SSF52540 148 370 3.2E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A0244 9c62fd23a8bc02f4b5b9335a53536a35 449 Gene3D G3DSA:1.10.10.60 381 446 7.7E-6 T 12-10-2018 Vc3S01_A0244 9c62fd23a8bc02f4b5b9335a53536a35 449 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 354 363 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Vc3S01_A0244 9c62fd23a8bc02f4b5b9335a53536a35 449 Gene3D G3DSA:3.40.50.300 139 315 7.4E-58 T 12-10-2018 Vc3S01_2384 d2285a999fe88b23118704f8a372c457 577 SUPERFAMILY SSF47323 455 577 1.77E-35 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Vc3S01_2384 d2285a999fe88b23118704f8a372c457 577 SUPERFAMILY SSF55190 2 96 3.4E-22 T 12-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 Vc3S01_2384 d2285a999fe88b23118704f8a372c457 577 Pfam PF00750 tRNA synthetases class I (R) 98 447 2.8E-162 T 12-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 Vc3S01_2384 d2285a999fe88b23118704f8a372c457 577 Gene3D G3DSA:3.40.50.620 108 454 1.7E-108 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Vc3S01_2384 d2285a999fe88b23118704f8a372c457 577 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 3 577 6.6E-200 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Vc3S01_2384 d2285a999fe88b23118704f8a372c457 577 Gene3D G3DSA:1.10.730.10 455 577 1.0E-35 T 12-10-2018 Vc3S01_2384 d2285a999fe88b23118704f8a372c457 577 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 7 87 2.8E-20 T 12-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Vc3S01_2384 d2285a999fe88b23118704f8a372c457 577 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 577 28.172 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Vc3S01_2384 d2285a999fe88b23118704f8a372c457 577 SMART SM00836 461 577 2.1E-41 T 12-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 Vc3S01_2384 d2285a999fe88b23118704f8a372c457 577 SMART SM01016 5 87 2.0E-28 T 12-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Vc3S01_2384 d2285a999fe88b23118704f8a372c457 577 Gene3D G3DSA:3.30.1360.70 1 106 1.4E-33 T 12-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 Vc3S01_2384 d2285a999fe88b23118704f8a372c457 577 Pfam PF05746 DALR anticodon binding domain 461 577 3.7E-36 T 12-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 Vc3S01_2384 d2285a999fe88b23118704f8a372c457 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 114 129 3.6E-25 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Vc3S01_2384 d2285a999fe88b23118704f8a372c457 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 129 145 3.6E-25 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Vc3S01_2384 d2285a999fe88b23118704f8a372c457 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 153 166 3.6E-25 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Vc3S01_2384 d2285a999fe88b23118704f8a372c457 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 304 325 3.6E-25 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Vc3S01_2384 d2285a999fe88b23118704f8a372c457 577 SUPERFAMILY SSF52374 111 454 1.29E-93 T 12-10-2018 Vc3S01_2384 d2285a999fe88b23118704f8a372c457 577 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 122 133 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Vc3S01_1525 d11712043cd136946488d6555d3c35c8 356 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 133 236 1.3E-7 T 12-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 Vc3S01_1525 d11712043cd136946488d6555d3c35c8 356 Gene3D G3DSA:3.40.50.720 1 129 1.4E-33 T 12-10-2018 Vc3S01_1525 d11712043cd136946488d6555d3c35c8 356 SUPERFAMILY SSF51735 3 153 2.44E-38 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_1525 d11712043cd136946488d6555d3c35c8 356 SUPERFAMILY SSF55347 126 312 3.6E-27 T 12-10-2018 Vc3S01_1525 d11712043cd136946488d6555d3c35c8 356 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 121 8.7E-24 T 12-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Vc3S01_1525 d11712043cd136946488d6555d3c35c8 356 Gene3D G3DSA:3.30.360.10 130 350 5.4E-39 T 12-10-2018 Vc3S01_A0077 0be19d126f47c90a302606c6a770b8fa 455 SUPERFAMILY SSF46689 92 139 2.6E-6 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_A0077 0be19d126f47c90a302606c6a770b8fa 455 SUPERFAMILY SSF48150 303 452 1.19E-27 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Vc3S01_A0077 0be19d126f47c90a302606c6a770b8fa 455 Pfam PF12833 Helix-turn-helix domain 112 190 3.4E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_A0077 0be19d126f47c90a302606c6a770b8fa 455 Gene3D G3DSA:1.10.1670.10 415 455 3.2E-6 T 12-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 Vc3S01_A0077 0be19d126f47c90a302606c6a770b8fa 455 SMART SM01009 200 312 2.0E-31 T 12-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal Vc3S01_A0077 0be19d126f47c90a302606c6a770b8fa 455 Gene3D G3DSA:3.30.310.20 201 312 2.7E-23 T 12-10-2018 IPR037046 DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily Vc3S01_A0077 0be19d126f47c90a302606c6a770b8fa 455 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 143 185 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Vc3S01_A0077 0be19d126f47c90a302606c6a770b8fa 455 Pfam PF02805 Metal binding domain of Ada 14 77 2.9E-29 T 12-10-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 Vc3S01_A0077 0be19d126f47c90a302606c6a770b8fa 455 SUPERFAMILY SSF55945 201 293 1.18E-24 T 12-10-2018 Vc3S01_A0077 0be19d126f47c90a302606c6a770b8fa 455 SUPERFAMILY SSF46689 144 191 3.58E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_A0077 0be19d126f47c90a302606c6a770b8fa 455 Pfam PF06029 AlkA N-terminal domain 201 312 2.6E-31 T 12-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal Vc3S01_A0077 0be19d126f47c90a302606c6a770b8fa 455 SMART SM00342 106 189 3.2E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_A0077 0be19d126f47c90a302606c6a770b8fa 455 Gene3D G3DSA:3.40.10.10 4 79 4.8E-29 T 12-10-2018 IPR035451 Ada-like domain superfamily Vc3S01_A0077 0be19d126f47c90a302606c6a770b8fa 455 SUPERFAMILY SSF57884 7 91 7.45E-34 T 12-10-2018 IPR035451 Ada-like domain superfamily Vc3S01_A0077 0be19d126f47c90a302606c6a770b8fa 455 Gene3D G3DSA:1.10.340.30 313 413 2.2E-17 T 12-10-2018 Vc3S01_A0077 0be19d126f47c90a302606c6a770b8fa 455 Gene3D G3DSA:1.10.10.60 86 194 1.2E-24 T 12-10-2018 Vc3S01_0520 932d33db6e2d403c37e78fef21eb137e 439 Gene3D G3DSA:2.40.50.140 1 88 9.0E-29 T 12-10-2018 Vc3S01_0520 932d33db6e2d403c37e78fef21eb137e 439 SUPERFAMILY SSF50249 18 74 3.43E-13 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Vc3S01_0520 932d33db6e2d403c37e78fef21eb137e 439 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 370 400 - T 12-10-2018 IPR030390 RNA methyltransferase TrmA, active site Vc3S01_0520 932d33db6e2d403c37e78fef21eb137e 439 Pfam PF01938 TRAM domain 17 68 6.1E-8 T 12-10-2018 IPR002792 TRAM domain Vc3S01_0520 932d33db6e2d403c37e78fef21eb137e 439 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 25 431 1.2E-128 T 12-10-2018 Vc3S01_0520 932d33db6e2d403c37e78fef21eb137e 439 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 421 431 - T 12-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site Vc3S01_0520 932d33db6e2d403c37e78fef21eb137e 439 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 97 438 3.6E-34 T 12-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 Vc3S01_0520 932d33db6e2d403c37e78fef21eb137e 439 Gene3D G3DSA:3.40.50.150 89 433 1.0E-117 T 12-10-2018 Vc3S01_0520 932d33db6e2d403c37e78fef21eb137e 439 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 19 439 64.107 T 12-10-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 Vc3S01_0520 932d33db6e2d403c37e78fef21eb137e 439 Gene3D G3DSA:3.40.1350.30 135 271 1.0E-117 T 12-10-2018 Vc3S01_0520 932d33db6e2d403c37e78fef21eb137e 439 SUPERFAMILY SSF53335 77 438 2.74E-87 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Vc3S01_2069 31a3e364c036394d63ead302b79d743a 241 Pfam PF00106 short chain dehydrogenase 5 183 9.1E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_2069 31a3e364c036394d63ead302b79d743a 241 SUPERFAMILY SSF51735 5 236 2.79E-46 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_2069 31a3e364c036394d63ead302b79d743a 241 Gene3D G3DSA:3.40.50.720 4 215 1.9E-46 T 12-10-2018 Vc3S01_2069 31a3e364c036394d63ead302b79d743a 241 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 129 157 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Vc3S01_2069 31a3e364c036394d63ead302b79d743a 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 8.8E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_2069 31a3e364c036394d63ead302b79d743a 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 116 132 8.8E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_2069 31a3e364c036394d63ead302b79d743a 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 142 161 8.8E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_2069 31a3e364c036394d63ead302b79d743a 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 180 8.8E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A0152 0885265ecac65b94d0f4f77bc8cf382d 896 Gene3D G3DSA:1.10.287.100 280 317 6.4E-9 T 12-10-2018 Vc3S01_A0152 0885265ecac65b94d0f4f77bc8cf382d 896 Gene3D G3DSA:3.30.1390.40 539 573 7.5E-111 T 12-10-2018 Vc3S01_A0152 0885265ecac65b94d0f4f77bc8cf382d 896 SUPERFAMILY SSF48208 247 891 1.74E-77 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Vc3S01_A0152 0885265ecac65b94d0f4f77bc8cf382d 896 Gene3D G3DSA:1.50.10.10 654 893 6.7E-112 T 12-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 Vc3S01_A0152 0885265ecac65b94d0f4f77bc8cf382d 896 Pfam PF01204 Trehalase 686 878 1.0E-8 T 12-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 Vc3S01_A0152 0885265ecac65b94d0f4f77bc8cf382d 896 Gene3D G3DSA:1.50.10.10 324 603 7.5E-111 T 12-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 Vc3S01_A0152 0885265ecac65b94d0f4f77bc8cf382d 896 Gene3D G3DSA:2.70.98.50 35 278 4.2E-73 T 12-10-2018 Vc3S01_0592 6c7ee2ee98430582f7ce7f088d771657 337 Gene3D G3DSA:3.40.190.10 120 328 9.6E-127 T 12-10-2018 Vc3S01_0592 6c7ee2ee98430582f7ce7f088d771657 337 Gene3D G3DSA:3.40.190.10 25 297 9.6E-127 T 12-10-2018 Vc3S01_0592 6c7ee2ee98430582f7ce7f088d771657 337 PIRSF PIRSF002825 1 337 3.9E-102 T 12-10-2018 IPR026045 Ferric binding protein Vc3S01_0592 6c7ee2ee98430582f7ce7f088d771657 337 Pfam PF13343 Bacterial extracellular solute-binding protein 72 298 9.0E-19 T 12-10-2018 Vc3S01_0592 6c7ee2ee98430582f7ce7f088d771657 337 SUPERFAMILY SSF53850 24 332 1.81E-75 T 12-10-2018 Vc3S01_2794 76877d6513d7a7a4000eb8970898a8ba 421 SUPERFAMILY SSF81342 6 296 9.58E-93 T 12-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 Vc3S01_2794 76877d6513d7a7a4000eb8970898a8ba 421 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 295 396 7.4E-41 T 12-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 Vc3S01_2794 76877d6513d7a7a4000eb8970898a8ba 421 PIRSF PIRSF038885 1 421 2.7E-153 T 12-10-2018 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 Vc3S01_2794 76877d6513d7a7a4000eb8970898a8ba 421 Pfam PF00033 Cytochrome b/b6/petB 23 211 2.8E-66 T 12-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 Vc3S01_2794 76877d6513d7a7a4000eb8970898a8ba 421 Gene3D G3DSA:1.20.810.10 1 421 5.0E-150 T 12-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 Vc3S01_2794 76877d6513d7a7a4000eb8970898a8ba 421 SUPERFAMILY SSF81648 297 412 1.29E-33 T 12-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 Vc3S01_2084 382d76a6eba5fb6bb5664b679adba3b1 1107 SUPERFAMILY SSF46785 1039 1104 4.56E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_2084 382d76a6eba5fb6bb5664b679adba3b1 1107 Gene3D G3DSA:3.40.50.300 719 1021 2.3E-119 T 12-10-2018 Vc3S01_2084 382d76a6eba5fb6bb5664b679adba3b1 1107 SUPERFAMILY SSF52540 696 1008 8.76E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2084 382d76a6eba5fb6bb5664b679adba3b1 1107 Pfam PF01580 FtsK/SpoIIIE family 722 935 4.7E-70 T 12-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 Vc3S01_2084 382d76a6eba5fb6bb5664b679adba3b1 1107 Gene3D G3DSA:3.30.980.40 614 718 1.3E-32 T 12-10-2018 Vc3S01_2084 382d76a6eba5fb6bb5664b679adba3b1 1107 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 29 199 5.0E-42 T 12-10-2018 IPR025199 DNA translocase FtsK, 4TM region Vc3S01_2084 382d76a6eba5fb6bb5664b679adba3b1 1107 SMART SM00843 1039 1104 4.3E-38 T 12-10-2018 IPR018541 FtsK gamma domain Vc3S01_2084 382d76a6eba5fb6bb5664b679adba3b1 1107 Gene3D G3DSA:1.10.10.10 1033 1100 3.2E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_2084 382d76a6eba5fb6bb5664b679adba3b1 1107 Pfam PF09397 Ftsk gamma domain 1041 1101 9.5E-26 T 12-10-2018 IPR018541 FtsK gamma domain Vc3S01_A2050 cae132c4a822ff4b5f0423402c1770c1 484 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 Vc3S01_A2050 cae132c4a822ff4b5f0423402c1770c1 484 Pfam PF00367 phosphotransferase system, EIIB 11 43 3.4E-11 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 Vc3S01_A2050 cae132c4a822ff4b5f0423402c1770c1 484 Pfam PF02378 Phosphotransferase system, EIIC 130 411 1.3E-30 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 Vc3S01_A2050 cae132c4a822ff4b5f0423402c1770c1 484 Gene3D G3DSA:3.30.1360.60 3 79 4.1E-20 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 Vc3S01_A2050 cae132c4a822ff4b5f0423402c1770c1 484 SUPERFAMILY SSF55604 8 81 1.7E-18 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 Vc3S01_A0435 ce0a3f2681fc1cf91dbb9faa83a4e6d4 279 Pfam PF02361 Cobalt transport protein 17 236 9.3E-31 T 12-10-2018 IPR003339 ABC/ECF transporter, transmembrane component Vc3S01_1631 1fe3645e0ac51ee74006812a881b1976 664 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 197 547 1.4E-113 T 12-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 Vc3S01_1631 1fe3645e0ac51ee74006812a881b1976 664 Gene3D G3DSA:3.90.226.10 324 544 1.6E-57 T 12-10-2018 Vc3S01_1631 1fe3645e0ac51ee74006812a881b1976 664 Pfam PF08180 B melanoma antigen family 9 36 1.8E-15 T 12-10-2018 IPR012530 B melanoma antigen-like Vc3S01_1631 1fe3645e0ac51ee74006812a881b1976 664 SMART SM00228 246 323 7.7E-8 T 12-10-2018 IPR001478 PDZ domain GO:0005515 Vc3S01_1631 1fe3645e0ac51ee74006812a881b1976 664 SMART SM00245 326 527 3.3E-63 T 12-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 Vc3S01_1631 1fe3645e0ac51ee74006812a881b1976 664 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 531 662 8.3E-38 T 12-10-2018 IPR020992 Tail specific protease, C-terminal Vc3S01_1631 1fe3645e0ac51ee74006812a881b1976 664 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 239 319 6.5E-13 T 12-10-2018 IPR001478 PDZ domain GO:0005515 Vc3S01_1631 1fe3645e0ac51ee74006812a881b1976 664 SUPERFAMILY SSF52096 166 531 7.79E-73 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Vc3S01_1631 1fe3645e0ac51ee74006812a881b1976 664 SUPERFAMILY SSF50156 217 336 3.51E-15 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 Vc3S01_1631 1fe3645e0ac51ee74006812a881b1976 664 Pfam PF03572 Peptidase family S41 356 525 7.3E-52 T 12-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 Vc3S01_1631 1fe3645e0ac51ee74006812a881b1976 664 Gene3D G3DSA:2.30.42.10 236 320 6.4E-12 T 12-10-2018 Vc3S01_A0996 0eb34cb9c6032bad7433309153203f3f 140 Gene3D G3DSA:3.40.630.30 6 140 3.0E-35 T 12-10-2018 Vc3S01_A0996 0eb34cb9c6032bad7433309153203f3f 140 Pfam PF13673 Acetyltransferase (GNAT) domain 25 139 1.4E-21 T 12-10-2018 IPR000182 GNAT domain Vc3S01_A0996 0eb34cb9c6032bad7433309153203f3f 140 SUPERFAMILY SSF55729 15 139 2.74E-32 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_2630 f4f802de6dc6dc1bb522dcde17d13677 372 Pfam PF04551 GcpE protein 14 354 2.2E-132 T 12-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Vc3S01_2630 f4f802de6dc6dc1bb522dcde17d13677 372 SUPERFAMILY SSF56014 265 354 1.88E-11 T 12-10-2018 Vc3S01_2630 f4f802de6dc6dc1bb522dcde17d13677 372 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 359 35.17 T 12-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Vc3S01_2630 f4f802de6dc6dc1bb522dcde17d13677 372 SUPERFAMILY SSF51717 15 208 7.85E-11 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Vc3S01_2630 f4f802de6dc6dc1bb522dcde17d13677 372 Gene3D G3DSA:3.30.413.10 262 361 3.8E-25 T 12-10-2018 Vc3S01_2630 f4f802de6dc6dc1bb522dcde17d13677 372 PIRSF PIRSF004640 1 364 4.8E-148 T 12-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Vc3S01_2630 f4f802de6dc6dc1bb522dcde17d13677 372 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 351 2.7E-127 T 12-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Vc3S01_2630 f4f802de6dc6dc1bb522dcde17d13677 372 Gene3D G3DSA:3.20.20.20 1 261 2.7E-104 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Vc3S01_0631 f4fcb13f7ade9bf64ad735d717fd512c 135 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 98 5.0E-47 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Vc3S01_0631 f4fcb13f7ade9bf64ad735d717fd512c 135 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 116 3.9E-35 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Vc3S01_0631 f4fcb13f7ade9bf64ad735d717fd512c 135 SUPERFAMILY SSF89919 2 105 6.41E-32 T 12-10-2018 IPR023799 Ribosome-binding factor A domain superfamily Vc3S01_0631 f4fcb13f7ade9bf64ad735d717fd512c 135 ProSitePatterns PS01319 Ribosome-binding factor A signature. 77 98 - T 12-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 Vc3S01_0631 f4fcb13f7ade9bf64ad735d717fd512c 135 Pfam PF02033 Ribosome-binding factor A 7 110 2.1E-30 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Vc3S01_0631 f4fcb13f7ade9bf64ad735d717fd512c 135 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 6 111 26.472 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Vc3S01_0631 f4fcb13f7ade9bf64ad735d717fd512c 135 Gene3D G3DSA:3.30.300.20 1 106 3.9E-35 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta Vc3S01_1277 de87735abd7a60e07df2eb02314fefeb 179 Gene3D G3DSA:3.90.1520.10 1 178 4.6E-58 T 12-10-2018 IPR038158 H-NOX domain superfamily GO:0020037 KEGG: 00230+4.6.1.2|Reactome: R-HSA-392154 Vc3S01_1277 de87735abd7a60e07df2eb02314fefeb 179 SUPERFAMILY SSF111126 1 176 9.42E-51 T 12-10-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily Vc3S01_1277 de87735abd7a60e07df2eb02314fefeb 179 Pfam PF07700 Haem-NO-binding 2 162 8.0E-40 T 12-10-2018 IPR011644 Heme NO-binding GO:0020037 KEGG: 00230+4.6.1.2|Reactome: R-HSA-392154 Vc3S01_2521 4a6a39b50b1119fb635b6d950ac1908a 339 SUPERFAMILY SSF52540 1 208 3.88E-50 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2521 4a6a39b50b1119fb635b6d950ac1908a 339 SUPERFAMILY SSF48019 211 331 2.04E-30 T 12-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 Vc3S01_2521 4a6a39b50b1119fb635b6d950ac1908a 339 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 214 332 1.0E-32 T 12-10-2018 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Vc3S01_2521 4a6a39b50b1119fb635b6d950ac1908a 339 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 17 331 6.6E-103 T 12-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 Vc3S01_2521 4a6a39b50b1119fb635b6d950ac1908a 339 Pfam PF06144 DNA polymerase III, delta subunit 20 189 4.3E-45 T 12-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 Vc3S01_2521 4a6a39b50b1119fb635b6d950ac1908a 339 Gene3D G3DSA:1.20.272.10 213 337 2.8E-38 T 12-10-2018 Vc3S01_2521 4a6a39b50b1119fb635b6d950ac1908a 339 Gene3D G3DSA:1.10.8.60 143 212 5.9E-20 T 12-10-2018 Vc3S01_2521 4a6a39b50b1119fb635b6d950ac1908a 339 Gene3D G3DSA:3.40.50.300 1 139 1.1E-49 T 12-10-2018 Vc3S01_3072 873ab8f7110042f15ed365c045dcebcf 609 Gene3D G3DSA:2.40.50.250 487 603 3.2E-130 T 12-10-2018 Vc3S01_3072 873ab8f7110042f15ed365c045dcebcf 609 Pfam PF00009 Elongation factor Tu GTP binding domain 8 198 4.9E-57 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Vc3S01_3072 873ab8f7110042f15ed365c045dcebcf 609 Gene3D G3DSA:3.40.50.300 5 202 4.2E-69 T 12-10-2018 Vc3S01_3072 873ab8f7110042f15ed365c045dcebcf 609 PRINTS PR00315 GTP-binding elongation factor signature 75 85 1.8E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Vc3S01_3072 873ab8f7110042f15ed365c045dcebcf 609 PRINTS PR00315 GTP-binding elongation factor signature 91 102 1.8E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Vc3S01_3072 873ab8f7110042f15ed365c045dcebcf 609 PRINTS PR00315 GTP-binding elongation factor signature 11 24 1.8E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Vc3S01_3072 873ab8f7110042f15ed365c045dcebcf 609 PRINTS PR00315 GTP-binding elongation factor signature 55 63 1.8E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Vc3S01_3072 873ab8f7110042f15ed365c045dcebcf 609 PRINTS PR00315 GTP-binding elongation factor signature 127 136 1.8E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Vc3S01_3072 873ab8f7110042f15ed365c045dcebcf 609 SUPERFAMILY SSF54980 306 391 5.4E-16 T 12-10-2018 IPR035647 EF-G domain III/V-like Vc3S01_3072 873ab8f7110042f15ed365c045dcebcf 609 Gene3D G3DSA:3.30.70.240 393 486 3.2E-130 T 12-10-2018 Vc3S01_3072 873ab8f7110042f15ed365c045dcebcf 609 Gene3D G3DSA:2.40.30.10 203 303 6.2E-34 T 12-10-2018 Vc3S01_3072 873ab8f7110042f15ed365c045dcebcf 609 Pfam PF03144 Elongation factor Tu domain 2 223 293 2.2E-9 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Vc3S01_3072 873ab8f7110042f15ed365c045dcebcf 609 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 155 2.4E-24 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Vc3S01_3072 873ab8f7110042f15ed365c045dcebcf 609 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site Vc3S01_3072 873ab8f7110042f15ed365c045dcebcf 609 Pfam PF00679 Elongation factor G C-terminus 399 480 3.8E-22 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like Vc3S01_3072 873ab8f7110042f15ed365c045dcebcf 609 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 9 603 2.9E-294 T 12-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 Vc3S01_3072 873ab8f7110042f15ed365c045dcebcf 609 SUPERFAMILY SSF54980 402 516 1.77E-26 T 12-10-2018 IPR035647 EF-G domain III/V-like Vc3S01_3072 873ab8f7110042f15ed365c045dcebcf 609 SUPERFAMILY SSF50447 155 303 7.07E-33 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Vc3S01_3072 873ab8f7110042f15ed365c045dcebcf 609 SUPERFAMILY SSF52540 5 211 5.35E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_3072 873ab8f7110042f15ed365c045dcebcf 609 Gene3D G3DSA:3.30.70.870 310 594 3.2E-130 T 12-10-2018 Vc3S01_A1313 365c9c7886056bbe72f1dfa4812581ba 314 Pfam PF01926 50S ribosome-binding GTPase 120 184 2.0E-14 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Vc3S01_A1313 365c9c7886056bbe72f1dfa4812581ba 314 SUPERFAMILY SSF52540 12 187 8.63E-41 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A1313 365c9c7886056bbe72f1dfa4812581ba 314 Gene3D G3DSA:1.10.1580.10 177 268 3.8E-29 T 12-10-2018 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily Vc3S01_A1313 365c9c7886056bbe72f1dfa4812581ba 314 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 6 275 1.2E-107 T 12-10-2018 IPR019991 GTP-binding protein, ribosome biogenesis Vc3S01_A1313 365c9c7886056bbe72f1dfa4812581ba 314 Gene3D G3DSA:3.40.50.300 6 174 2.0E-44 T 12-10-2018 Vc3S01_A1313 365c9c7886056bbe72f1dfa4812581ba 314 PIRSF PIRSF006230 2 280 1.3E-104 T 12-10-2018 IPR016478 GTPase, MTG1 Vc3S01_A1107 799ccf21216d960cb32cde818593516a 128 Pfam PF12375 Phage protein 42 109 1.5E-20 T 12-10-2018 IPR021077 Bacteriophage phi-Lf, Orf112 Vc3S01_A0822 91a97816410a2442981ed6e581520fff 875 Gene3D G3DSA:3.40.50.300 455 727 1.1E-14 T 12-10-2018 Vc3S01_A0822 91a97816410a2442981ed6e581520fff 875 Pfam PF02463 RecF/RecN/SMC N terminal domain 82 710 3.9E-15 T 12-10-2018 IPR003395 RecF/RecN/SMC, N-terminal Vc3S01_A0822 91a97816410a2442981ed6e581520fff 875 Gene3D G3DSA:3.40.50.300 81 328 4.9E-14 T 12-10-2018 Vc3S01_A0822 91a97816410a2442981ed6e581520fff 875 SUPERFAMILY SSF52540 82 704 1.48E-26 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A0040 5c510e7a199b06a1a2c84c357fa05103 408 Pfam PF03616 Sodium/glutamate symporter 9 376 3.0E-152 T 12-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 Vc3S01_A0040 5c510e7a199b06a1a2c84c357fa05103 408 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 11 406 5.4E-137 T 12-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 Vc3S01_A0040 5c510e7a199b06a1a2c84c357fa05103 408 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 5 407 23.803 T 12-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 Vc3S01_A0606 a2c4cfdc7211563fbe47572ba55938b7 199 Gene3D G3DSA:3.40.30.10 17 199 2.8E-50 T 12-10-2018 Vc3S01_A0606 a2c4cfdc7211563fbe47572ba55938b7 199 Pfam PF01323 DSBA-like thioredoxin domain 40 179 1.2E-19 T 12-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 Vc3S01_A0606 a2c4cfdc7211563fbe47572ba55938b7 199 ProSitePatterns PS00194 Thioredoxin family active site. 41 59 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Vc3S01_A0606 a2c4cfdc7211563fbe47572ba55938b7 199 PIRSF PIRSF001488 1 199 3.2E-62 T 12-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL Vc3S01_A0606 a2c4cfdc7211563fbe47572ba55938b7 199 SUPERFAMILY SSF52833 20 197 4.23E-44 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Vc3S01_1217 ed0e129d71611e736a4c9f20e8a8bb48 958 Gene3D G3DSA:3.90.1150.10 38 461 2.5E-130 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Vc3S01_1217 ed0e129d71611e736a4c9f20e8a8bb48 958 Gene3D G3DSA:3.40.640.10 87 355 2.5E-130 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Vc3S01_1217 ed0e129d71611e736a4c9f20e8a8bb48 958 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 533 892 1.7E-61 T 12-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 Vc3S01_1217 ed0e129d71611e736a4c9f20e8a8bb48 958 Gene3D G3DSA:3.90.1150.10 561 947 7.8E-141 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Vc3S01_1217 ed0e129d71611e736a4c9f20e8a8bb48 958 Pfam PF00202 Aminotransferase class-III 51 464 6.4E-94 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Vc3S01_1217 ed0e129d71611e736a4c9f20e8a8bb48 958 SUPERFAMILY SSF53383 507 952 1.45E-112 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Vc3S01_1217 ed0e129d71611e736a4c9f20e8a8bb48 958 Gene3D G3DSA:3.40.640.10 575 843 7.8E-141 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Vc3S01_1217 ed0e129d71611e736a4c9f20e8a8bb48 958 Gene3D G3DSA:1.20.1650.10 463 560 5.6E-46 T 12-10-2018 Vc3S01_1217 ed0e129d71611e736a4c9f20e8a8bb48 958 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 34 467 1.5E-158 T 12-10-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 Vc3S01_1217 ed0e129d71611e736a4c9f20e8a8bb48 958 SUPERFAMILY SSF53383 42 464 2.58E-112 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Vc3S01_A0978 5be6ed784a724abf25f969c71f5045ab 146 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 25 - T 12-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 Vc3S01_A0978 5be6ed784a724abf25f969c71f5045ab 146 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 107 1.9E-11 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Vc3S01_A0978 5be6ed784a724abf25f969c71f5045ab 146 SUPERFAMILY SSF54593 1 123 6.33E-26 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Vc3S01_A0978 5be6ed784a724abf25f969c71f5045ab 146 Gene3D G3DSA:3.10.180.10 1 112 5.3E-18 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Vc3S01_1673 de729510a1a14cba518d23e77e043b8c 243 Pfam PF02146 Sir2 family 13 186 2.3E-50 T 12-10-2018 IPR003000 Sirtuin family GO:0070403 Vc3S01_1673 de729510a1a14cba518d23e77e043b8c 243 Gene3D G3DSA:3.30.1600.10 22 158 8.1E-81 T 12-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily Vc3S01_1673 de729510a1a14cba518d23e77e043b8c 243 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 6 236 55.435 T 12-10-2018 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 Reactome: R-HSA-2151201 Vc3S01_1673 de729510a1a14cba518d23e77e043b8c 243 Gene3D G3DSA:3.40.50.1220 8 225 8.1E-81 T 12-10-2018 Vc3S01_1673 de729510a1a14cba518d23e77e043b8c 243 SUPERFAMILY SSF52467 6 234 8.55E-73 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Vc3S01_p30046 5dd54ed979c3acbdf20146f0011311c6 200 Pfam PF02796 Helix-turn-helix domain of resolvase 139 180 8.3E-8 T 12-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 Vc3S01_p30046 5dd54ed979c3acbdf20146f0011311c6 200 SUPERFAMILY SSF53041 1 136 3.53E-43 T 12-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 Vc3S01_p30046 5dd54ed979c3acbdf20146f0011311c6 200 Pfam PF00239 Resolvase, N terminal domain 4 136 2.1E-42 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Vc3S01_p30046 5dd54ed979c3acbdf20146f0011311c6 200 SUPERFAMILY SSF46689 139 180 5.29E-5 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_p30046 5dd54ed979c3acbdf20146f0011311c6 200 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 12-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 Vc3S01_p30046 5dd54ed979c3acbdf20146f0011311c6 200 Gene3D G3DSA:3.40.50.1390 3 125 1.2E-43 T 12-10-2018 Vc3S01_p30046 5dd54ed979c3acbdf20146f0011311c6 200 ProSitePatterns PS00398 Site-specific recombinases signature 2. 56 68 - T 12-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 Vc3S01_p30046 5dd54ed979c3acbdf20146f0011311c6 200 SMART SM00857 3 137 6.2E-53 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Vc3S01_2344 65bc8339944ba4fc880dd6bda5e83ece 539 Gene3D G3DSA:3.40.50.980 191 363 3.2E-56 T 12-10-2018 Vc3S01_2344 65bc8339944ba4fc880dd6bda5e83ece 539 Gene3D G3DSA:2.30.38.10 364 439 2.4E-25 T 12-10-2018 Vc3S01_2344 65bc8339944ba4fc880dd6bda5e83ece 539 Pfam PF00501 AMP-binding enzyme 38 445 1.4E-80 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Vc3S01_2344 65bc8339944ba4fc880dd6bda5e83ece 539 ProSitePatterns PS00455 Putative AMP-binding domain signature. 197 208 - T 12-10-2018 IPR020845 AMP-binding, conserved site Vc3S01_2344 65bc8339944ba4fc880dd6bda5e83ece 539 Gene3D G3DSA:3.40.50.980 28 186 1.3E-36 T 12-10-2018 Vc3S01_2344 65bc8339944ba4fc880dd6bda5e83ece 539 TIGRFAM TIGR02275 DHB_AMP_lig: (2,3-dihydroxybenzoyl)adenylate synthase 10 535 2.9E-234 T 12-10-2018 IPR011963 2,3-dihydroxybenzoate-AMP ligase GO:0008668|GO:0019290 Vc3S01_2344 65bc8339944ba4fc880dd6bda5e83ece 539 Gene3D G3DSA:3.30.300.310 441 539 1.5E-29 T 12-10-2018 Vc3S01_2344 65bc8339944ba4fc880dd6bda5e83ece 539 Pfam PF13193 AMP-binding enzyme C-terminal domain 454 529 7.5E-14 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Vc3S01_2344 65bc8339944ba4fc880dd6bda5e83ece 539 SUPERFAMILY SSF56801 14 538 1.83E-130 T 12-10-2018 Vc3S01_0851 75335c4be5b6c756de186f0bc7b10cf9 469 SUPERFAMILY SSF52172 3 173 9.39E-40 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_0851 75335c4be5b6c756de186f0bc7b10cf9 469 Pfam PF02954 Bacterial regulatory protein, Fis family 420 459 1.3E-12 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Vc3S01_0851 75335c4be5b6c756de186f0bc7b10cf9 469 Gene3D G3DSA:3.40.50.2300 1 119 1.3E-33 T 12-10-2018 Vc3S01_0851 75335c4be5b6c756de186f0bc7b10cf9 469 Gene3D G3DSA:3.40.50.300 120 300 5.1E-65 T 12-10-2018 Vc3S01_0851 75335c4be5b6c756de186f0bc7b10cf9 469 SUPERFAMILY SSF52540 135 370 6.08E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0851 75335c4be5b6c756de186f0bc7b10cf9 469 Pfam PF00072 Response regulator receiver domain 6 115 3.5E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_0851 75335c4be5b6c756de186f0bc7b10cf9 469 Gene3D G3DSA:1.10.10.60 403 466 6.9E-10 T 12-10-2018 Vc3S01_0851 75335c4be5b6c756de186f0bc7b10cf9 469 SUPERFAMILY SSF46689 342 460 2.42E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_0851 75335c4be5b6c756de186f0bc7b10cf9 469 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 215 230 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Vc3S01_0851 75335c4be5b6c756de186f0bc7b10cf9 469 SMART SM00448 4 115 8.2E-33 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_0851 75335c4be5b6c756de186f0bc7b10cf9 469 SMART SM00382 149 296 2.3E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_0851 75335c4be5b6c756de186f0bc7b10cf9 469 Gene3D G3DSA:1.10.8.60 301 379 6.5E-31 T 12-10-2018 Vc3S01_0851 75335c4be5b6c756de186f0bc7b10cf9 469 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 342 351 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Vc3S01_0851 75335c4be5b6c756de186f0bc7b10cf9 469 Pfam PF00158 Sigma-54 interaction domain 134 295 9.5E-66 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Vc3S01_A0428 301c276fb9c24058c5c1f0f134e6b30b 166 SUPERFAMILY SSF55729 3 161 2.06E-36 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_A0428 301c276fb9c24058c5c1f0f134e6b30b 166 Gene3D G3DSA:3.40.630.30 1 165 3.6E-41 T 12-10-2018 Vc3S01_A0428 301c276fb9c24058c5c1f0f134e6b30b 166 Pfam PF00583 Acetyltransferase (GNAT) family 41 136 1.8E-16 T 12-10-2018 IPR000182 GNAT domain Vc3S01_1962 dae2983875d187698a1d043cb7e8e179 458 Pfam PF01554 MatE 252 413 4.2E-17 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Vc3S01_1962 dae2983875d187698a1d043cb7e8e179 458 Pfam PF01554 MatE 25 185 2.9E-26 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Vc3S01_1962 dae2983875d187698a1d043cb7e8e179 458 TIGRFAM TIGR00797 matE: MATE efflux family protein 25 421 5.1E-63 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Vc3S01_1962 dae2983875d187698a1d043cb7e8e179 458 PIRSF PIRSF006603 8 458 2.7E-65 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Vc3S01_0080 2c7c7b5ca188e74d17f3f8edc32fdfa7 409 Pfam PF07497 Rho termination factor, RNA-binding domain 42 115 4.9E-32 T 12-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 Vc3S01_0080 2c7c7b5ca188e74d17f3f8edc32fdfa7 409 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 409 247.829 T 12-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 Vc3S01_0080 2c7c7b5ca188e74d17f3f8edc32fdfa7 409 SUPERFAMILY SSF52540 80 361 1.44E-68 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0080 2c7c7b5ca188e74d17f3f8edc32fdfa7 409 SUPERFAMILY SSF68912 2 36 7.85E-8 T 12-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily Vc3S01_0080 2c7c7b5ca188e74d17f3f8edc32fdfa7 409 SMART SM00382 160 345 1.8E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_0080 2c7c7b5ca188e74d17f3f8edc32fdfa7 409 Pfam PF07498 Rho termination factor, N-terminal domain 1 37 1.9E-14 T 12-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 Vc3S01_0080 2c7c7b5ca188e74d17f3f8edc32fdfa7 409 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 150 353 2.5E-22 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Vc3S01_0080 2c7c7b5ca188e74d17f3f8edc32fdfa7 409 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 407 3.4E-217 T 12-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 Vc3S01_0080 2c7c7b5ca188e74d17f3f8edc32fdfa7 409 SMART SM00959 1 37 1.7E-10 T 12-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 Vc3S01_0080 2c7c7b5ca188e74d17f3f8edc32fdfa7 409 SMART SM00357 42 108 1.7E-17 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 Vc3S01_0080 2c7c7b5ca188e74d17f3f8edc32fdfa7 409 Gene3D G3DSA:3.40.50.300 120 407 3.4E-134 T 12-10-2018 Vc3S01_0080 2c7c7b5ca188e74d17f3f8edc32fdfa7 409 Gene3D G3DSA:2.40.50.140 38 107 1.0E-34 T 12-10-2018 Vc3S01_0080 2c7c7b5ca188e74d17f3f8edc32fdfa7 409 Gene3D G3DSA:1.10.720.10 1 37 3.8E-16 T 12-10-2018 Vc3S01_0080 2c7c7b5ca188e74d17f3f8edc32fdfa7 409 SUPERFAMILY SSF50249 38 115 4.71E-29 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Vc3S01_A0739 bcc6a09465fd25c13d4c4fcdae515f52 161 TIGRFAM TIGR00402 napF: ferredoxin-type protein NapF 17 154 3.8E-42 T 12-10-2018 IPR004496 Ferredoxin-type protein NapF GO:0051539 Vc3S01_A0739 bcc6a09465fd25c13d4c4fcdae515f52 161 Hamap MF_02201 Ferredoxin-type protein NapF [napF]. 23 160 23.917 T 12-10-2018 IPR004496 Ferredoxin-type protein NapF GO:0051539 Vc3S01_A0739 bcc6a09465fd25c13d4c4fcdae515f52 161 Pfam PF12838 4Fe-4S dicluster domain 106 151 9.9E-8 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Vc3S01_A0739 bcc6a09465fd25c13d4c4fcdae515f52 161 Pfam PF13187 4Fe-4S dicluster domain 34 79 2.1E-8 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Vc3S01_A0739 bcc6a09465fd25c13d4c4fcdae515f52 161 SUPERFAMILY SSF54862 31 158 2.59E-18 T 12-10-2018 Vc3S01_A0739 bcc6a09465fd25c13d4c4fcdae515f52 161 Gene3D G3DSA:3.30.70.20 95 158 1.2E-9 T 12-10-2018 Vc3S01_A0739 bcc6a09465fd25c13d4c4fcdae515f52 161 Gene3D G3DSA:3.30.70.20 29 82 1.0E-10 T 12-10-2018 Vc3S01_A0739 bcc6a09465fd25c13d4c4fcdae515f52 161 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 139 150 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Vc3S01_0999 db4e0a5fabbdc6ce3a902e1fe9f23e2f 318 SMART SM00148 13 156 4.7E-7 T 12-10-2018 IPR000909 Phosphatidylinositol-specific phospholipase C, X domain Vc3S01_0999 db4e0a5fabbdc6ce3a902e1fe9f23e2f 318 SUPERFAMILY SSF51695 5 293 1.73E-51 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 Vc3S01_0999 db4e0a5fabbdc6ce3a902e1fe9f23e2f 318 Pfam PF00388 Phosphatidylinositol-specific phospholipase C, X domain 46 156 3.5E-7 T 12-10-2018 IPR000909 Phosphatidylinositol-specific phospholipase C, X domain Vc3S01_0999 db4e0a5fabbdc6ce3a902e1fe9f23e2f 318 Gene3D G3DSA:3.20.20.190 1 294 1.4E-69 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 Vc3S01_2872 450aa019453c3edcd4e3636fcefbacdd 391 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 1.3E-142 T 12-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 Vc3S01_2872 450aa019453c3edcd4e3636fcefbacdd 391 PIRSF PIRSF002401 1 376 1.0E-136 T 12-10-2018 IPR035101 GTP-binding protein, Obg-type Vc3S01_2872 450aa019453c3edcd4e3636fcefbacdd 391 SUPERFAMILY SSF82051 2 157 5.75E-55 T 12-10-2018 IPR036726 GTP1/OBG domain superfamily Vc3S01_2872 450aa019453c3edcd4e3636fcefbacdd 391 Hamap MF_01454 GTPase Obg [obg]. 2 333 46.813 T 12-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 Vc3S01_2872 450aa019453c3edcd4e3636fcefbacdd 391 Gene3D G3DSA:3.40.50.300 159 336 1.6E-51 T 12-10-2018 Vc3S01_2872 450aa019453c3edcd4e3636fcefbacdd 391 Gene3D G3DSA:2.70.210.12 1 158 5.2E-58 T 12-10-2018 IPR036726 GTP1/OBG domain superfamily Vc3S01_2872 450aa019453c3edcd4e3636fcefbacdd 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 7.2E-34 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Vc3S01_2872 450aa019453c3edcd4e3636fcefbacdd 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 7.2E-34 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Vc3S01_2872 450aa019453c3edcd4e3636fcefbacdd 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 7.2E-34 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Vc3S01_2872 450aa019453c3edcd4e3636fcefbacdd 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 7.2E-34 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Vc3S01_2872 450aa019453c3edcd4e3636fcefbacdd 391 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 12-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 Vc3S01_2872 450aa019453c3edcd4e3636fcefbacdd 391 Pfam PF01018 GTP1/OBG 4 156 1.9E-55 T 12-10-2018 IPR006169 GTP1/OBG domain Vc3S01_2872 450aa019453c3edcd4e3636fcefbacdd 391 SUPERFAMILY SSF52540 151 340 2.41E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2872 450aa019453c3edcd4e3636fcefbacdd 391 Pfam PF01926 50S ribosome-binding GTPase 161 284 5.0E-23 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Vc3S01_2475 b40024b5ca9d150f5fcb3ab0de41e02d 275 SMART SM00138 8 272 8.9E-133 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Vc3S01_2475 b40024b5ca9d150f5fcb3ab0de41e02d 275 PRINTS PR00996 Glutamate methyltransferase family signature 30 43 3.5E-43 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Vc3S01_2475 b40024b5ca9d150f5fcb3ab0de41e02d 275 PRINTS PR00996 Glutamate methyltransferase family signature 212 226 3.5E-43 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Vc3S01_2475 b40024b5ca9d150f5fcb3ab0de41e02d 275 PRINTS PR00996 Glutamate methyltransferase family signature 143 159 3.5E-43 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Vc3S01_2475 b40024b5ca9d150f5fcb3ab0de41e02d 275 PRINTS PR00996 Glutamate methyltransferase family signature 106 126 3.5E-43 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Vc3S01_2475 b40024b5ca9d150f5fcb3ab0de41e02d 275 PRINTS PR00996 Glutamate methyltransferase family signature 231 254 3.5E-43 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Vc3S01_2475 b40024b5ca9d150f5fcb3ab0de41e02d 275 PRINTS PR00996 Glutamate methyltransferase family signature 69 81 3.5E-43 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Vc3S01_2475 b40024b5ca9d150f5fcb3ab0de41e02d 275 Gene3D G3DSA:3.40.50.150 75 274 1.8E-60 T 12-10-2018 Vc3S01_2475 b40024b5ca9d150f5fcb3ab0de41e02d 275 SUPERFAMILY SSF47757 3 75 1.27E-14 T 12-10-2018 Vc3S01_2475 b40024b5ca9d150f5fcb3ab0de41e02d 275 SUPERFAMILY SSF53335 76 269 2.39E-50 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Vc3S01_2475 b40024b5ca9d150f5fcb3ab0de41e02d 275 Pfam PF01739 CheR methyltransferase, SAM binding domain 76 269 1.9E-68 T 12-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal Vc3S01_2475 b40024b5ca9d150f5fcb3ab0de41e02d 275 Gene3D G3DSA:1.10.155.10 1 74 8.1E-11 T 12-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily Vc3S01_2475 b40024b5ca9d150f5fcb3ab0de41e02d 275 Pfam PF03705 CheR methyltransferase, all-alpha domain 9 57 6.2E-10 T 12-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal Vc3S01_3166 97f31d1bc276dd25ff90fcde69488bcb 305 Gene3D G3DSA:3.40.1500.10 1 305 1.6E-137 T 12-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Vc3S01_3166 97f31d1bc276dd25ff90fcde69488bcb 305 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 3 281 56.203 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Vc3S01_3166 97f31d1bc276dd25ff90fcde69488bcb 305 PIRSF PIRSF000166 2 305 8.6E-129 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Vc3S01_3166 97f31d1bc276dd25ff90fcde69488bcb 305 PRINTS PR00073 Coprogen oxidase signature 31 47 2.6E-70 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Vc3S01_3166 97f31d1bc276dd25ff90fcde69488bcb 305 PRINTS PR00073 Coprogen oxidase signature 166 195 2.6E-70 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Vc3S01_3166 97f31d1bc276dd25ff90fcde69488bcb 305 PRINTS PR00073 Coprogen oxidase signature 238 265 2.6E-70 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Vc3S01_3166 97f31d1bc276dd25ff90fcde69488bcb 305 PRINTS PR00073 Coprogen oxidase signature 94 118 2.6E-70 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Vc3S01_3166 97f31d1bc276dd25ff90fcde69488bcb 305 PRINTS PR00073 Coprogen oxidase signature 266 292 2.6E-70 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Vc3S01_3166 97f31d1bc276dd25ff90fcde69488bcb 305 PRINTS PR00073 Coprogen oxidase signature 129 151 2.6E-70 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Vc3S01_3166 97f31d1bc276dd25ff90fcde69488bcb 305 SUPERFAMILY SSF102886 5 305 6.67E-138 T 12-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Vc3S01_3166 97f31d1bc276dd25ff90fcde69488bcb 305 Pfam PF01218 Coproporphyrinogen III oxidase 9 305 6.9E-132 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Vc3S01_3166 97f31d1bc276dd25ff90fcde69488bcb 305 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 170 194 - T 12-10-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Vc3S01_A1592 d0d6bfd32bad61d770d610421a65869c 152 Gene3D G3DSA:3.30.1490.190 90 152 9.8E-13 T 12-10-2018 Vc3S01_A1592 d0d6bfd32bad61d770d610421a65869c 152 SUPERFAMILY SSF46785 15 147 4.24E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A1592 d0d6bfd32bad61d770d610421a65869c 152 Pfam PF01475 Ferric uptake regulator family 19 141 6.8E-12 T 12-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 Vc3S01_A1592 d0d6bfd32bad61d770d610421a65869c 152 Gene3D G3DSA:1.10.10.10 2 88 7.9E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A1368 3953fc2d96fa4fb8e894bd36b3cf1155 251 SUPERFAMILY SSF52540 2 228 5.57E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A1368 3953fc2d96fa4fb8e894bd36b3cf1155 251 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_A1368 3953fc2d96fa4fb8e894bd36b3cf1155 251 Pfam PF00005 ABC transporter 18 164 3.1E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_A1368 3953fc2d96fa4fb8e894bd36b3cf1155 251 Gene3D G3DSA:3.40.50.300 1 249 1.4E-60 T 12-10-2018 Vc3S01_A1368 3953fc2d96fa4fb8e894bd36b3cf1155 251 SMART SM00382 26 213 5.3E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_A0190 8a7e23aeb663a09dceb345d08211866e 204 Gene3D G3DSA:3.20.20.70 1 204 6.6E-72 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_A0190 8a7e23aeb663a09dceb345d08211866e 204 Pfam PF02581 Thiamine monophosphate synthase 6 186 2.0E-65 T 12-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Vc3S01_A0190 8a7e23aeb663a09dceb345d08211866e 204 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 5 197 3.8E-66 T 12-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Vc3S01_A0190 8a7e23aeb663a09dceb345d08211866e 204 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 4 204 27.821 T 12-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Vc3S01_A0190 8a7e23aeb663a09dceb345d08211866e 204 SUPERFAMILY SSF51391 3 202 1.31E-68 T 12-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Vc3S01_2213 8ae01e78061c3808deaea7694b9dbd58 241 Hamap MF_01802 Chromosome partition protein MukE [mukE]. 10 238 49.735 T 12-10-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 Vc3S01_2213 8ae01e78061c3808deaea7694b9dbd58 241 Gene3D G3DSA:1.10.10.2250 1 78 2.2E-34 T 12-10-2018 Vc3S01_2213 8ae01e78061c3808deaea7694b9dbd58 241 Gene3D G3DSA:1.10.10.2260 88 194 2.6E-49 T 12-10-2018 Vc3S01_2213 8ae01e78061c3808deaea7694b9dbd58 241 Pfam PF04288 MukE-like family 10 235 9.4E-119 T 12-10-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 Vc3S01_1211 4c332cbbce51a920fee2f12bce5e7f8c 245 Gene3D G3DSA:3.30.460.10 7 89 9.3E-7 T 12-10-2018 Vc3S01_1211 4c332cbbce51a920fee2f12bce5e7f8c 245 SUPERFAMILY SSF81301 13 79 6.54E-7 T 12-10-2018 Vc3S01_A0994 8bdee8c0b3e698827b804a6956d9c167 90 Gene3D G3DSA:1.20.58.1000 1 90 2.1E-30 T 12-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily Vc3S01_A0994 8bdee8c0b3e698827b804a6956d9c167 90 Pfam PF02583 Metal-sensitive transcriptional repressor 7 86 6.4E-24 T 12-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 Vc3S01_3210 a909fcd6bbd97c2a817942ce1a3b8a03 84 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 19 76 1.2E-30 T 12-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 Vc3S01_3210 a909fcd6bbd97c2a817942ce1a3b8a03 84 Gene3D G3DSA:1.20.20.10 1 77 1.2E-27 T 12-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_3210 a909fcd6bbd97c2a817942ce1a3b8a03 84 ProSitePatterns PS00605 ATP synthase c subunit signature. 39 60 - T 12-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_3210 a909fcd6bbd97c2a817942ce1a3b8a03 84 SUPERFAMILY SSF81333 3 78 1.7E-19 T 12-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily Vc3S01_3210 a909fcd6bbd97c2a817942ce1a3b8a03 84 Pfam PF00137 ATP synthase subunit C 10 72 1.3E-10 T 12-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 Vc3S01_3210 a909fcd6bbd97c2a817942ce1a3b8a03 84 Hamap MF_01396 ATP synthase subunit c [atpH]. 9 74 13.874 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_3210 a909fcd6bbd97c2a817942ce1a3b8a03 84 PRINTS PR00124 ATP synthase C subunit signature 11 30 1.7E-6 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_3210 a909fcd6bbd97c2a817942ce1a3b8a03 84 PRINTS PR00124 ATP synthase C subunit signature 32 47 1.7E-6 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_3210 a909fcd6bbd97c2a817942ce1a3b8a03 84 PRINTS PR00124 ATP synthase C subunit signature 49 74 1.7E-6 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_0814 c20f015910757c08c5bce4c833ad6161 212 Gene3D G3DSA:3.40.50.170 2 212 1.7E-86 T 12-10-2018 Vc3S01_0814 c20f015910757c08c5bce4c833ad6161 212 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 134 157 - T 12-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Vc3S01_0814 c20f015910757c08c5bce4c833ad6161 212 SUPERFAMILY SSF53328 2 201 4.32E-68 T 12-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Vc3S01_0814 c20f015910757c08c5bce4c833ad6161 212 Pfam PF00551 Formyl transferase 2 182 1.1E-65 T 12-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Vc3S01_0814 c20f015910757c08c5bce4c833ad6161 212 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 2 191 1.3E-79 T 12-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 Vc3S01_0814 c20f015910757c08c5bce4c833ad6161 212 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 31.748 T 12-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 Vc3S01_A1925 8dde59916b46f56eba5c220cea5c3ec0 317 Gene3D G3DSA:2.70.70.10 144 265 1.9E-44 T 12-10-2018 IPR011055 Duplicated hybrid motif Vc3S01_A1925 8dde59916b46f56eba5c220cea5c3ec0 317 Pfam PF01551 Peptidase family M23 169 264 1.8E-31 T 12-10-2018 IPR016047 Peptidase M23 Vc3S01_A1925 8dde59916b46f56eba5c220cea5c3ec0 317 SUPERFAMILY SSF51261 42 267 5.18E-55 T 12-10-2018 IPR011055 Duplicated hybrid motif Vc3S01_p10004 485d03136831cc2fa55079bcd8d32c6e 225 Gene3D G3DSA:3.40.50.300 6 223 2.7E-48 T 12-10-2018 Vc3S01_p10004 485d03136831cc2fa55079bcd8d32c6e 225 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 13 180 9.3E-11 T 12-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Vc3S01_p10004 485d03136831cc2fa55079bcd8d32c6e 225 PIRSF PIRSF009320 6 225 2.3E-43 T 12-10-2018 Vc3S01_p10004 485d03136831cc2fa55079bcd8d32c6e 225 SUPERFAMILY SSF52540 5 221 1.09E-33 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0623 f9d199579a029ed1ce6f52739445de4d 209 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 15 208 29.003 T 12-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 Vc3S01_0623 f9d199579a029ed1ce6f52739445de4d 209 PIRSF PIRSF005461 1 209 3.9E-80 T 12-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 Vc3S01_0623 f9d199579a029ed1ce6f52739445de4d 209 SUPERFAMILY SSF53335 30 209 2.57E-44 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Vc3S01_0623 f9d199579a029ed1ce6f52739445de4d 209 Pfam PF01728 FtsJ-like methyltransferase 31 207 3.8E-58 T 12-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 Vc3S01_0623 f9d199579a029ed1ce6f52739445de4d 209 Gene3D G3DSA:3.40.50.150 30 209 3.5E-61 T 12-10-2018 Vc3S01_2627 8669b4ac10bb5e9f5affe7edef9fc181 386 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 7 382 6.1E-143 T 12-10-2018 IPR017687 Outer membrane protein assembly factor BamB Vc3S01_2627 8669b4ac10bb5e9f5affe7edef9fc181 386 SUPERFAMILY SSF50998 31 376 4.37E-84 T 12-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily Vc3S01_2627 8669b4ac10bb5e9f5affe7edef9fc181 386 Gene3D G3DSA:2.130.10.10 18 385 1.6E-100 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Vc3S01_2627 8669b4ac10bb5e9f5affe7edef9fc181 386 SMART SM00564 322 353 0.0018 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Vc3S01_2627 8669b4ac10bb5e9f5affe7edef9fc181 386 SMART SM00564 106 138 0.0016 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Vc3S01_2627 8669b4ac10bb5e9f5affe7edef9fc181 386 SMART SM00564 191 223 330.0 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Vc3S01_2627 8669b4ac10bb5e9f5affe7edef9fc181 386 SMART SM00564 147 178 0.0092 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Vc3S01_2627 8669b4ac10bb5e9f5affe7edef9fc181 386 SMART SM00564 63 94 7.0E-8 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Vc3S01_2627 8669b4ac10bb5e9f5affe7edef9fc181 386 SMART SM00564 243 274 56.0 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Vc3S01_2627 8669b4ac10bb5e9f5affe7edef9fc181 386 SMART SM00564 280 312 42.0 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Vc3S01_2627 8669b4ac10bb5e9f5affe7edef9fc181 386 Pfam PF13360 PQQ-like domain 76 310 2.8E-52 T 12-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat Vc3S01_2627 8669b4ac10bb5e9f5affe7edef9fc181 386 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 3 384 40.938 T 12-10-2018 IPR017687 Outer membrane protein assembly factor BamB Vc3S01_A1374 00bc4613d37143bd447f2ce891668c98 243 Gene3D G3DSA:3.40.50.1580 2 243 3.7E-77 T 12-10-2018 Vc3S01_A1374 00bc4613d37143bd447f2ce891668c98 243 Pfam PF01048 Phosphorylase superfamily 17 199 4.9E-36 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 Vc3S01_A1374 00bc4613d37143bd447f2ce891668c98 243 SUPERFAMILY SSF53167 4 220 7.2E-69 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 Vc3S01_A1005 7aba3208b32370ac6be11bb0c9f96c1a 246 Pfam PF00800 Prephenate dehydratase 34 217 1.4E-18 T 12-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 Vc3S01_A1005 7aba3208b32370ac6be11bb0c9f96c1a 246 Gene3D G3DSA:3.40.190.10 37 216 5.3E-19 T 12-10-2018 Vc3S01_A1005 7aba3208b32370ac6be11bb0c9f96c1a 246 Gene3D G3DSA:3.40.190.10 117 208 5.3E-19 T 12-10-2018 Vc3S01_A1005 7aba3208b32370ac6be11bb0c9f96c1a 246 SUPERFAMILY SSF53850 32 217 1.95E-12 T 12-10-2018 Vc3S01_A1666 e5509248d6774a6d9656ba95e47e0cf9 273 SMART SM00421 207 264 4.9E-19 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_A1666 e5509248d6774a6d9656ba95e47e0cf9 273 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 240 252 1.5E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_A1666 e5509248d6774a6d9656ba95e47e0cf9 273 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 224 240 1.5E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_A1666 e5509248d6774a6d9656ba95e47e0cf9 273 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 210 224 1.5E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_A1666 e5509248d6774a6d9656ba95e47e0cf9 273 Gene3D G3DSA:1.10.10.10 170 273 2.6E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A1666 e5509248d6774a6d9656ba95e47e0cf9 273 Pfam PF00196 Bacterial regulatory proteins, luxR family 209 261 9.8E-17 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_A1666 e5509248d6774a6d9656ba95e47e0cf9 273 SUPERFAMILY SSF46894 203 267 3.4E-17 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Vc3S01_2654 4322e4e2d07c75fb678eb94d53dbfb9b 437 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 11 258 2.5E-114 T 12-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 Vc3S01_2654 4322e4e2d07c75fb678eb94d53dbfb9b 437 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 259 437 1.4E-89 T 12-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 Vc3S01_2654 4322e4e2d07c75fb678eb94d53dbfb9b 437 Gene3D G3DSA:3.20.20.60 2 420 3.8E-182 T 12-10-2018 Vc3S01_2654 4322e4e2d07c75fb678eb94d53dbfb9b 437 SUPERFAMILY SSF51621 6 437 2.15E-153 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Vc3S01_2654 4322e4e2d07c75fb678eb94d53dbfb9b 437 PIRSF PIRSF001362 1 437 1.0E-223 T 12-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 Vc3S01_2654 4322e4e2d07c75fb678eb94d53dbfb9b 437 ProSitePatterns PS00161 Isocitrate lyase signature. 196 201 - T 12-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 Vc3S01_2654 4322e4e2d07c75fb678eb94d53dbfb9b 437 Pfam PF00463 Isocitrate lyase family 15 259 8.4E-62 T 12-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 Vc3S01_A0750 460d6c2119b2fe7b2138e09065d557fa 69 Pfam PF00472 RF-1 domain 2 64 3.2E-8 T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Vc3S01_A0750 460d6c2119b2fe7b2138e09065d557fa 69 Gene3D G3DSA:3.30.160.20 1 68 1.3E-14 T 12-10-2018 Vc3S01_A1463 b8b7947ebe4423c1aba9f22b972a3732 477 Gene3D G3DSA:3.40.309.10 256 313 3.5E-11 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Vc3S01_A1463 b8b7947ebe4423c1aba9f22b972a3732 477 PIRSF PIRSF009414 1 477 2.4E-243 T 12-10-2018 IPR008670 Long-chain-fatty-acyl-CoA reductase, LuxC GO:0003995|GO:0008218|GO:0055114 KEGG: 00073+1.2.1.50|MetaCyc: PWY-7723 Vc3S01_A1463 b8b7947ebe4423c1aba9f22b972a3732 477 SUPERFAMILY SSF53720 3 433 9.96E-32 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Vc3S01_A1463 b8b7947ebe4423c1aba9f22b972a3732 477 Pfam PF05893 Acyl-CoA reductase (LuxC) 50 442 4.3E-123 T 12-10-2018 IPR008670 Long-chain-fatty-acyl-CoA reductase, LuxC GO:0003995|GO:0008218|GO:0055114 KEGG: 00073+1.2.1.50|MetaCyc: PWY-7723 Vc3S01_A1463 b8b7947ebe4423c1aba9f22b972a3732 477 Gene3D G3DSA:3.40.605.10 135 255 3.5E-11 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Vc3S01_2606 7c87c4428e5d2be3b45a34aad2448734 278 Gene3D G3DSA:3.20.20.70 5 278 5.6E-62 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_2606 7c87c4428e5d2be3b45a34aad2448734 278 Pfam PF05853 beta-keto acid cleavage enzyme 12 276 4.1E-60 T 12-10-2018 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00310+2.3.1.247 Vc3S01_1965 027b7f0a6e973439bdfc42a27fa11283 633 Gene3D G3DSA:3.40.50.1820 342 631 2.7E-45 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_1965 027b7f0a6e973439bdfc42a27fa11283 633 Gene3D G3DSA:3.40.1090.10 119 254 2.4E-8 T 12-10-2018 Vc3S01_1965 027b7f0a6e973439bdfc42a27fa11283 633 Gene3D G3DSA:3.40.1090.10 11 117 6.0E-14 T 12-10-2018 Vc3S01_1965 027b7f0a6e973439bdfc42a27fa11283 633 Pfam PF01734 Patatin-like phospholipase 27 194 1.3E-18 T 12-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 Vc3S01_1965 027b7f0a6e973439bdfc42a27fa11283 633 Pfam PF12146 Serine aminopeptidase, S33 360 612 8.3E-51 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 Vc3S01_1965 027b7f0a6e973439bdfc42a27fa11283 633 SUPERFAMILY SSF52151 24 293 8.89E-37 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Vc3S01_1965 027b7f0a6e973439bdfc42a27fa11283 633 SUPERFAMILY SSF53474 352 627 2.63E-36 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_0294 22966c70a76c072563a1b2125c9b2ef9 699 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 697 0.0 T 12-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Vc3S01_0294 22966c70a76c072563a1b2125c9b2ef9 699 SUPERFAMILY SSF54211 484 604 6.83E-47 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Vc3S01_0294 22966c70a76c072563a1b2125c9b2ef9 699 Gene3D G3DSA:2.40.30.10 299 405 2.2E-48 T 12-10-2018 Vc3S01_0294 22966c70a76c072563a1b2125c9b2ef9 699 Hamap MF_00054_B Elongation factor G [fusA]. 6 697 112.938 T 12-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Vc3S01_0294 22966c70a76c072563a1b2125c9b2ef9 699 PRINTS PR00315 GTP-binding elongation factor signature 58 66 9.4E-17 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Vc3S01_0294 22966c70a76c072563a1b2125c9b2ef9 699 PRINTS PR00315 GTP-binding elongation factor signature 101 112 9.4E-17 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Vc3S01_0294 22966c70a76c072563a1b2125c9b2ef9 699 PRINTS PR00315 GTP-binding elongation factor signature 85 95 9.4E-17 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Vc3S01_0294 22966c70a76c072563a1b2125c9b2ef9 699 PRINTS PR00315 GTP-binding elongation factor signature 137 146 9.4E-17 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Vc3S01_0294 22966c70a76c072563a1b2125c9b2ef9 699 PRINTS PR00315 GTP-binding elongation factor signature 12 25 9.4E-17 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Vc3S01_0294 22966c70a76c072563a1b2125c9b2ef9 699 Gene3D G3DSA:3.30.230.10 489 693 2.7E-92 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Vc3S01_0294 22966c70a76c072563a1b2125c9b2ef9 699 Gene3D G3DSA:3.40.50.300 1 298 1.6E-115 T 12-10-2018 Vc3S01_0294 22966c70a76c072563a1b2125c9b2ef9 699 Pfam PF03144 Elongation factor Tu domain 2 329 396 3.1E-18 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Vc3S01_0294 22966c70a76c072563a1b2125c9b2ef9 699 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 1.1E-34 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Vc3S01_0294 22966c70a76c072563a1b2125c9b2ef9 699 Gene3D G3DSA:3.30.70.870 410 485 4.1E-32 T 12-10-2018 Vc3S01_0294 22966c70a76c072563a1b2125c9b2ef9 699 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site Vc3S01_0294 22966c70a76c072563a1b2125c9b2ef9 699 SUPERFAMILY SSF54980 608 695 4.03E-30 T 12-10-2018 IPR035647 EF-G domain III/V-like Vc3S01_0294 22966c70a76c072563a1b2125c9b2ef9 699 Gene3D G3DSA:3.30.70.240 609 680 2.7E-92 T 12-10-2018 Vc3S01_0294 22966c70a76c072563a1b2125c9b2ef9 699 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 1.2E-66 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Vc3S01_0294 22966c70a76c072563a1b2125c9b2ef9 699 SMART SM00889 485 603 2.6E-76 T 12-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 Vc3S01_0294 22966c70a76c072563a1b2125c9b2ef9 699 SUPERFAMILY SSF52540 6 288 3.71E-106 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0294 22966c70a76c072563a1b2125c9b2ef9 699 Pfam PF14492 Elongation Factor G, domain II 409 483 1.5E-33 T 12-10-2018 Vc3S01_0294 22966c70a76c072563a1b2125c9b2ef9 699 SUPERFAMILY SSF50447 271 409 1.92E-36 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Vc3S01_0294 22966c70a76c072563a1b2125c9b2ef9 699 SUPERFAMILY SSF54980 407 485 8.63E-25 T 12-10-2018 IPR035647 EF-G domain III/V-like Vc3S01_0294 22966c70a76c072563a1b2125c9b2ef9 699 Pfam PF03764 Elongation factor G, domain IV 484 603 8.7E-49 T 12-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 Vc3S01_0294 22966c70a76c072563a1b2125c9b2ef9 699 SMART SM00838 605 693 6.1E-57 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like Vc3S01_0294 22966c70a76c072563a1b2125c9b2ef9 699 Pfam PF00679 Elongation factor G C-terminus 605 692 4.0E-31 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like Vc3S01_2947 055afa0c562126946e9f62b71d7d791d 183 SUPERFAMILY SSF110997 107 180 3.14E-18 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Vc3S01_2947 055afa0c562126946e9f62b71d7d791d 183 Gene3D G3DSA:3.30.70.1070 103 181 9.0E-28 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Vc3S01_2947 055afa0c562126946e9f62b71d7d791d 183 Pfam PF05036 Sporulation related domain 109 178 1.6E-14 T 12-10-2018 IPR007730 Sporulation-like domain GO:0042834 Vc3S01_1578 14656555b5703226033ca507762554c4 492 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 21 491 1.3E-175 T 12-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath Vc3S01_1578 14656555b5703226033ca507762554c4 492 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 64 491 8.4E-166 T 12-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath Vc3S01_2880 b16e8ab746df7dc5723ff03b6087f253 859 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 135 667 3.2E-76 T 12-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Vc3S01_2880 b16e8ab746df7dc5723ff03b6087f253 859 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 32 727 3.3E-212 T 12-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ Vc3S01_2880 b16e8ab746df7dc5723ff03b6087f253 859 Pfam PF11874 Domain of unknown function (DUF3394) 674 853 4.3E-70 T 12-10-2018 IPR021814 Protein of unknown function DUF3394 Vc3S01_1376 bf00d03dd7a723edba136738223aaa45 128 SUPERFAMILY SSF55811 4 116 1.35E-22 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Vc3S01_1376 bf00d03dd7a723edba136738223aaa45 128 Gene3D G3DSA:3.90.79.10 1 126 1.2E-20 T 12-10-2018 Vc3S01_1376 bf00d03dd7a723edba136738223aaa45 128 Pfam PF00293 NUDIX domain 2 121 2.1E-19 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Vc3S01_1376 bf00d03dd7a723edba136738223aaa45 128 PRINTS PR00502 NUDIX hydrolase family signature 43 58 1.0E-6 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Vc3S01_1376 bf00d03dd7a723edba136738223aaa45 128 PRINTS PR00502 NUDIX hydrolase family signature 29 43 1.0E-6 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Vc3S01_1376 bf00d03dd7a723edba136738223aaa45 128 ProSitePatterns PS00893 Nudix box signature. 34 55 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Vc3S01_2952 7f8e27cbb64820003cc04077dd2590d8 80 Gene3D G3DSA:1.20.5.340 1 79 1.5E-28 T 12-10-2018 Vc3S01_2952 7f8e27cbb64820003cc04077dd2590d8 80 Pfam PF06005 Cell division protein ZapB 1 78 1.8E-24 T 12-10-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 Vc3S01_2952 7f8e27cbb64820003cc04077dd2590d8 80 Hamap MF_01196 Cell division protein ZapB [zapB]. 1 79 17.94 T 12-10-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 Vc3S01_1028 3810351273ed43650c4f12dac9bad64a 209 Gene3D G3DSA:3.40.30.10 1 208 1.3E-58 T 12-10-2018 Vc3S01_1028 3810351273ed43650c4f12dac9bad64a 209 Pfam PF13743 Thioredoxin 6 175 6.5E-23 T 12-10-2018 Vc3S01_1028 3810351273ed43650c4f12dac9bad64a 209 SUPERFAMILY SSF52833 3 199 1.34E-35 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Vc3S01_A1202 a5bb0f67ffebacb426a301d862c6b67f 173 Gene3D G3DSA:2.40.128.20 12 172 5.3E-52 T 12-10-2018 IPR012674 Calycin Vc3S01_A1202 a5bb0f67ffebacb426a301d862c6b67f 173 SUPERFAMILY SSF50814 7 172 9.35E-50 T 12-10-2018 IPR012674 Calycin Vc3S01_A1202 a5bb0f67ffebacb426a301d862c6b67f 173 PRINTS PR01171 Bacterial lipocalin signature 67 76 3.1E-34 T 12-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 Vc3S01_A1202 a5bb0f67ffebacb426a301d862c6b67f 173 PRINTS PR01171 Bacterial lipocalin signature 101 115 3.1E-34 T 12-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 Vc3S01_A1202 a5bb0f67ffebacb426a301d862c6b67f 173 PRINTS PR01171 Bacterial lipocalin signature 31 45 3.1E-34 T 12-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 Vc3S01_A1202 a5bb0f67ffebacb426a301d862c6b67f 173 PRINTS PR01171 Bacterial lipocalin signature 160 170 3.1E-34 T 12-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 Vc3S01_A1202 a5bb0f67ffebacb426a301d862c6b67f 173 PRINTS PR01171 Bacterial lipocalin signature 48 64 3.1E-34 T 12-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 Vc3S01_A1202 a5bb0f67ffebacb426a301d862c6b67f 173 PRINTS PR01171 Bacterial lipocalin signature 133 144 3.1E-34 T 12-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 Vc3S01_A1202 a5bb0f67ffebacb426a301d862c6b67f 173 PIRSF PIRSF036893 1 173 2.4E-45 T 12-10-2018 IPR022271 Lipocalin, ApoD type Vc3S01_A1202 a5bb0f67ffebacb426a301d862c6b67f 173 Pfam PF08212 Lipocalin-like domain 32 171 1.0E-38 T 12-10-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain Vc3S01_A1012 6be0458728b5d5f67a20dc6597eaec7f 112 Pfam PF01638 HxlR-like helix-turn-helix 23 109 4.8E-19 T 12-10-2018 IPR002577 Helix-turn-helix, HxlR type Vc3S01_A1012 6be0458728b5d5f67a20dc6597eaec7f 112 SUPERFAMILY SSF46785 14 109 2.53E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A1012 6be0458728b5d5f67a20dc6597eaec7f 112 Gene3D G3DSA:1.10.10.10 10 112 5.8E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_1407 dfd9667ab3edb0cc15c06604ccd790f6 157 SUPERFAMILY SSF52172 1 132 4.98E-21 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_1407 dfd9667ab3edb0cc15c06604ccd790f6 157 Pfam PF00072 Response regulator receiver domain 7 125 5.0E-15 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_1407 dfd9667ab3edb0cc15c06604ccd790f6 157 SMART SM00448 4 125 7.3E-14 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_1407 dfd9667ab3edb0cc15c06604ccd790f6 157 Gene3D G3DSA:3.40.50.2300 1 135 1.8E-20 T 12-10-2018 Vc3S01_A2039 ac7159c18f28d767c56c709d502353df 704 Gene3D G3DSA:1.20.1560.10 141 454 4.8E-57 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Vc3S01_A2039 ac7159c18f28d767c56c709d502353df 704 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 3 698 5.6E-293 T 12-10-2018 IPR017750 ATPase, type I secretion system Vc3S01_A2039 ac7159c18f28d767c56c709d502353df 704 SUPERFAMILY SSF90123 138 452 2.49E-50 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Vc3S01_A2039 ac7159c18f28d767c56c709d502353df 704 SMART SM00382 495 681 1.9E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_A2039 ac7159c18f28d767c56c709d502353df 704 Gene3D G3DSA:3.40.50.300 460 703 5.7E-75 T 12-10-2018 Vc3S01_A2039 ac7159c18f28d767c56c709d502353df 704 ProSitePatterns PS00211 ABC transporters family signature. 607 621 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_A2039 ac7159c18f28d767c56c709d502353df 704 Pfam PF00005 ABC transporter 487 635 1.8E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_A2039 ac7159c18f28d767c56c709d502353df 704 SUPERFAMILY SSF52540 459 693 3.99E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A2039 ac7159c18f28d767c56c709d502353df 704 Pfam PF00664 ABC transporter transmembrane region 158 420 3.7E-21 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Vc3S01_A2039 ac7159c18f28d767c56c709d502353df 704 Gene3D G3DSA:3.90.70.10 1 126 8.5E-38 T 12-10-2018 Vc3S01_1138 de114e04aa16d67f3dbf238a29e97d87 301 Pfam PF03466 LysR substrate binding domain 91 295 1.6E-37 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_1138 de114e04aa16d67f3dbf238a29e97d87 301 Gene3D G3DSA:3.40.190.290 95 295 1.7E-58 T 12-10-2018 Vc3S01_1138 de114e04aa16d67f3dbf238a29e97d87 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 9.5E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_1138 de114e04aa16d67f3dbf238a29e97d87 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 9.5E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_1138 de114e04aa16d67f3dbf238a29e97d87 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 9.5E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_1138 de114e04aa16d67f3dbf238a29e97d87 301 SUPERFAMILY SSF53850 90 298 6.65E-41 T 12-10-2018 Vc3S01_1138 de114e04aa16d67f3dbf238a29e97d87 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 3.4E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_1138 de114e04aa16d67f3dbf238a29e97d87 301 SUPERFAMILY SSF46785 6 87 1.69E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_1138 de114e04aa16d67f3dbf238a29e97d87 301 Gene3D G3DSA:1.10.10.10 5 94 1.8E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_2325 84d6789d3bcd0fa1d0767fbb71bf542e 434 Gene3D G3DSA:1.10.3120.10 116 417 2.1E-107 T 12-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 Vc3S01_2325 84d6789d3bcd0fa1d0767fbb71bf542e 434 Gene3D G3DSA:3.10.50.40 150 246 2.1E-107 T 12-10-2018 Vc3S01_2325 84d6789d3bcd0fa1d0767fbb71bf542e 434 PIRSF PIRSF003095 1 434 4.2E-128 T 12-10-2018 IPR005215 Trigger factor GO:0015031 Vc3S01_2325 84d6789d3bcd0fa1d0767fbb71bf542e 434 SUPERFAMILY SSF102735 1 131 2.49E-41 T 12-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 Vc3S01_2325 84d6789d3bcd0fa1d0767fbb71bf542e 434 SUPERFAMILY SSF54534 90 241 1.71E-36 T 12-10-2018 Vc3S01_2325 84d6789d3bcd0fa1d0767fbb71bf542e 434 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 156 233 6.6E-13 T 12-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain Vc3S01_2325 84d6789d3bcd0fa1d0767fbb71bf542e 434 TIGRFAM TIGR00115 tig: trigger factor 11 412 4.8E-144 T 12-10-2018 IPR005215 Trigger factor GO:0015031 Vc3S01_2325 84d6789d3bcd0fa1d0767fbb71bf542e 434 Pfam PF05697 Bacterial trigger factor protein (TF) 1 144 5.5E-43 T 12-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 Vc3S01_2325 84d6789d3bcd0fa1d0767fbb71bf542e 434 Gene3D G3DSA:3.30.70.1050 1 115 5.9E-41 T 12-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 Vc3S01_2325 84d6789d3bcd0fa1d0767fbb71bf542e 434 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 263 412 2.9E-41 T 12-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 Vc3S01_2325 84d6789d3bcd0fa1d0767fbb71bf542e 434 Hamap MF_00303 Trigger factor [tig]. 1 418 21.919 T 12-10-2018 IPR005215 Trigger factor GO:0015031 Vc3S01_2325 84d6789d3bcd0fa1d0767fbb71bf542e 434 SUPERFAMILY SSF109998 248 429 1.37E-50 T 12-10-2018 IPR027304 Trigger factor/SurA domain superfamily Vc3S01_A1036 b74dc0361b475aed5326e6359ae341de 331 SUPERFAMILY SSF47413 1 58 6.47E-15 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Vc3S01_A1036 b74dc0361b475aed5326e6359ae341de 331 Gene3D G3DSA:1.10.260.40 1 61 5.0E-26 T 12-10-2018 Vc3S01_A1036 b74dc0361b475aed5326e6359ae341de 331 Pfam PF00356 Bacterial regulatory proteins, lacI family 2 50 4.2E-17 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Vc3S01_A1036 b74dc0361b475aed5326e6359ae341de 331 Gene3D G3DSA:3.40.50.2300 62 154 2.5E-20 T 12-10-2018 Vc3S01_A1036 b74dc0361b475aed5326e6359ae341de 331 SMART SM00354 1 73 1.8E-25 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Vc3S01_A1036 b74dc0361b475aed5326e6359ae341de 331 Gene3D G3DSA:3.40.50.2300 155 327 8.6E-28 T 12-10-2018 Vc3S01_A1036 b74dc0361b475aed5326e6359ae341de 331 SUPERFAMILY SSF53822 61 310 3.73E-39 T 12-10-2018 IPR028082 Periplasmic binding protein-like I Vc3S01_A1036 b74dc0361b475aed5326e6359ae341de 331 ProSitePatterns PS00356 LacI-type HTH domain signature. 3 21 - T 12-10-2018 Vc3S01_A1036 b74dc0361b475aed5326e6359ae341de 331 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 63 246 4.7E-13 T 12-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain Vc3S01_A1036 b74dc0361b475aed5326e6359ae341de 331 TIGRFAM TIGR02417 fruct_sucro_rep: D-fructose-responsive transcription factor 2 326 2.1E-148 T 12-10-2018 IPR012781 D-fructose-responsive transcription factor GO:0003677|GO:0006355|GO:0009750 Vc3S01_A1988 419113fbc840d9ce22e741f1587f3892 336 Pfam PF13602 Zinc-binding dehydrogenase 216 334 4.7E-10 T 12-10-2018 Vc3S01_A1988 419113fbc840d9ce22e741f1587f3892 336 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 40 104 2.1E-6 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Vc3S01_A1988 419113fbc840d9ce22e741f1587f3892 336 Gene3D G3DSA:3.40.50.720 149 270 1.2E-63 T 12-10-2018 Vc3S01_A1988 419113fbc840d9ce22e741f1587f3892 336 SUPERFAMILY SSF50129 19 158 8.22E-25 T 12-10-2018 IPR011032 GroES-like superfamily Vc3S01_A1988 419113fbc840d9ce22e741f1587f3892 336 SUPERFAMILY SSF51735 129 295 1.24E-18 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_A1988 419113fbc840d9ce22e741f1587f3892 336 Gene3D G3DSA:3.90.180.10 20 321 1.2E-63 T 12-10-2018 Vc3S01_A1988 419113fbc840d9ce22e741f1587f3892 336 SMART SM00829 21 334 3.8E-6 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Vc3S01_1212 deef011d7b9b66ea751eba44a33ebb60 787 SUPERFAMILY SSF53098 4 389 2.58E-86 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Vc3S01_1212 deef011d7b9b66ea751eba44a33ebb60 787 Pfam PF03104 DNA polymerase family B, exonuclease domain 74 296 1.2E-17 T 12-10-2018 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Vc3S01_1212 deef011d7b9b66ea751eba44a33ebb60 787 Gene3D G3DSA:3.90.1600.30 516 638 6.8E-8 T 12-10-2018 Vc3S01_1212 deef011d7b9b66ea751eba44a33ebb60 787 SMART SM00486 153 558 2.3E-67 T 12-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Vc3S01_1212 deef011d7b9b66ea751eba44a33ebb60 787 Gene3D G3DSA:1.10.287.690 468 514 5.6E-25 T 12-10-2018 Vc3S01_1212 deef011d7b9b66ea751eba44a33ebb60 787 ProSitePatterns PS00116 DNA polymerase family B signature. 546 554 - T 12-10-2018 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Vc3S01_1212 deef011d7b9b66ea751eba44a33ebb60 787 Gene3D G3DSA:3.90.1600.10 348 454 2.7E-28 T 12-10-2018 IPR023211 DNA polymerase, palm domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Vc3S01_1212 deef011d7b9b66ea751eba44a33ebb60 787 Gene3D G3DSA:1.10.132.60 643 787 5.2E-61 T 12-10-2018 Vc3S01_1212 deef011d7b9b66ea751eba44a33ebb60 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 415 428 1.6E-10 T 12-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Vc3S01_1212 deef011d7b9b66ea751eba44a33ebb60 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 544 552 1.6E-10 T 12-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Vc3S01_1212 deef011d7b9b66ea751eba44a33ebb60 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 492 504 1.6E-10 T 12-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Vc3S01_1212 deef011d7b9b66ea751eba44a33ebb60 787 Gene3D G3DSA:3.30.70.2250 41 108 9.9E-40 T 12-10-2018 Vc3S01_1212 deef011d7b9b66ea751eba44a33ebb60 787 SUPERFAMILY SSF56672 385 780 8.9E-117 T 12-10-2018 Vc3S01_1212 deef011d7b9b66ea751eba44a33ebb60 787 Gene3D G3DSA:2.40.50.590 6 153 9.9E-40 T 12-10-2018 Vc3S01_1212 deef011d7b9b66ea751eba44a33ebb60 787 Pfam PF00136 DNA polymerase family B 377 742 6.5E-42 T 12-10-2018 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Vc3S01_1212 deef011d7b9b66ea751eba44a33ebb60 787 Gene3D G3DSA:3.30.420.10 156 347 1.6E-70 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Vc3S01_p20190 4ef1f28022f496b51360506e37bdf280 94 SMART SM00894 58 94 1.5E-6 T 12-10-2018 IPR008613 Excalibur calcium-binding domain Vc3S01_p20190 4ef1f28022f496b51360506e37bdf280 94 Pfam PF05901 Excalibur calcium-binding domain 61 94 4.6E-8 T 12-10-2018 IPR008613 Excalibur calcium-binding domain Vc3S01_2455 cb64617257605bdffaa5ac912ed0b13c 322 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 311 8.8E-142 T 12-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 Vc3S01_2455 cb64617257605bdffaa5ac912ed0b13c 322 TIGRFAM TIGR01136 cysKM: cysteine synthase 10 311 6.5E-135 T 12-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 Vc3S01_2455 cb64617257605bdffaa5ac912ed0b13c 322 Gene3D G3DSA:3.40.50.1100 43 145 3.6E-125 T 12-10-2018 Vc3S01_2455 cb64617257605bdffaa5ac912ed0b13c 322 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 12-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 Vc3S01_2455 cb64617257605bdffaa5ac912ed0b13c 322 Gene3D G3DSA:3.40.50.1100 12 306 3.6E-125 T 12-10-2018 Vc3S01_2455 cb64617257605bdffaa5ac912ed0b13c 322 SUPERFAMILY SSF53686 3 313 1.02E-95 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Vc3S01_2455 cb64617257605bdffaa5ac912ed0b13c 322 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 299 6.4E-68 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Vc3S01_0916 5b703cae3b97ddec75e6d840297431da 420 Gene3D G3DSA:3.90.190.20 288 419 5.2E-34 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Vc3S01_0916 5b703cae3b97ddec75e6d840297431da 420 SUPERFAMILY SSF53623 12 285 6.41E-85 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Vc3S01_0916 5b703cae3b97ddec75e6d840297431da 420 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 144 159 - T 12-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 Vc3S01_0916 5b703cae3b97ddec75e6d840297431da 420 TIGRFAM TIGR01499 folC: bifunctional protein FolC 32 414 7.9E-104 T 12-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 Vc3S01_0916 5b703cae3b97ddec75e6d840297431da 420 Pfam PF02875 Mur ligase family, glutamate ligase domain 287 339 7.3E-7 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Vc3S01_0916 5b703cae3b97ddec75e6d840297431da 420 Pfam PF08245 Mur ligase middle domain 54 193 9.3E-7 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Vc3S01_0916 5b703cae3b97ddec75e6d840297431da 420 Gene3D G3DSA:3.40.1190.10 1 287 5.8E-91 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Vc3S01_0916 5b703cae3b97ddec75e6d840297431da 420 SUPERFAMILY SSF53244 288 416 6.96E-31 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Vc3S01_0916 5b703cae3b97ddec75e6d840297431da 420 PIRSF PIRSF001563 7 420 2.7E-105 T 12-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 Vc3S01_A1664 ac9b046523ab4d1d10408d8473bfd838 777 SUPERFAMILY SSF56059 2 371 1.29E-104 T 12-10-2018 Vc3S01_A1664 ac9b046523ab4d1d10408d8473bfd838 777 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 681 696 8.3E-6 T 12-10-2018 Vc3S01_A1664 ac9b046523ab4d1d10408d8473bfd838 777 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 698 713 8.3E-6 T 12-10-2018 Vc3S01_A1664 ac9b046523ab4d1d10408d8473bfd838 777 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 734 746 8.3E-6 T 12-10-2018 Vc3S01_A1664 ac9b046523ab4d1d10408d8473bfd838 777 Gene3D G3DSA:3.50.30.10 345 464 2.4E-41 T 12-10-2018 Vc3S01_A1664 ac9b046523ab4d1d10408d8473bfd838 777 Pfam PF00391 PEP-utilising enzyme, mobile domain 371 442 1.1E-26 T 12-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 Vc3S01_A1664 ac9b046523ab4d1d10408d8473bfd838 777 Gene3D G3DSA:3.30.1490.20 1 180 1.6E-69 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Vc3S01_A1664 ac9b046523ab4d1d10408d8473bfd838 777 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 681 699 - T 12-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 Vc3S01_A1664 ac9b046523ab4d1d10408d8473bfd838 777 Gene3D G3DSA:3.30.470.20 181 344 2.2E-59 T 12-10-2018 Vc3S01_A1664 ac9b046523ab4d1d10408d8473bfd838 777 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 1 776 0.0 T 12-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 Vc3S01_A1664 ac9b046523ab4d1d10408d8473bfd838 777 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 401 412 - T 12-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 Vc3S01_A1664 ac9b046523ab4d1d10408d8473bfd838 777 SUPERFAMILY SSF51621 448 774 4.57E-98 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Vc3S01_A1664 ac9b046523ab4d1d10408d8473bfd838 777 Gene3D G3DSA:3.20.20.60 465 775 1.9E-104 T 12-10-2018 Vc3S01_A1664 ac9b046523ab4d1d10408d8473bfd838 777 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 469 768 2.1E-62 T 12-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 Vc3S01_A1664 ac9b046523ab4d1d10408d8473bfd838 777 SUPERFAMILY SSF52009 336 454 7.72E-35 T 12-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 Vc3S01_A1664 ac9b046523ab4d1d10408d8473bfd838 777 PIRSF PIRSF000854 1 777 0.0 T 12-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 Vc3S01_A1664 ac9b046523ab4d1d10408d8473bfd838 777 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 5 332 1.1E-119 T 12-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 Vc3S01_0362 6a5a154a7bc424cafdcf9c96d35b8243 624 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 550 566 3.1E-29 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Vc3S01_0362 6a5a154a7bc424cafdcf9c96d35b8243 624 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 573 581 3.1E-29 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Vc3S01_0362 6a5a154a7bc424cafdcf9c96d35b8243 624 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 444 453 3.1E-29 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Vc3S01_0362 6a5a154a7bc424cafdcf9c96d35b8243 624 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 519 530 3.1E-29 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Vc3S01_0362 6a5a154a7bc424cafdcf9c96d35b8243 624 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 411 418 3.1E-29 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Vc3S01_0362 6a5a154a7bc424cafdcf9c96d35b8243 624 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 295 305 3.1E-29 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Vc3S01_0362 6a5a154a7bc424cafdcf9c96d35b8243 624 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 481 500 3.1E-29 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Vc3S01_0362 6a5a154a7bc424cafdcf9c96d35b8243 624 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 506 515 3.1E-29 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Vc3S01_0362 6a5a154a7bc424cafdcf9c96d35b8243 624 Gene3D G3DSA:1.20.990.10 305 409 1.7E-70 T 12-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 Vc3S01_0362 6a5a154a7bc424cafdcf9c96d35b8243 624 Pfam PF00175 Oxidoreductase NAD-binding domain 482 588 3.6E-19 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 Vc3S01_0362 6a5a154a7bc424cafdcf9c96d35b8243 624 SUPERFAMILY SSF52343 469 624 6.81E-52 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Vc3S01_0362 6a5a154a7bc424cafdcf9c96d35b8243 624 PIRSF PIRSF000207 20 624 7.3E-275 T 12-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Vc3S01_0362 6a5a154a7bc424cafdcf9c96d35b8243 624 SUPERFAMILY SSF52218 87 234 1.11E-45 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Vc3S01_0362 6a5a154a7bc424cafdcf9c96d35b8243 624 Pfam PF00667 FAD binding domain 257 449 5.1E-27 T 12-10-2018 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GO:0016491|GO:0055114 Vc3S01_0362 6a5a154a7bc424cafdcf9c96d35b8243 624 Pfam PF00258 Flavodoxin 90 213 6.4E-29 T 12-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 Vc3S01_0362 6a5a154a7bc424cafdcf9c96d35b8243 624 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 27 624 1.2E-258 T 12-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Vc3S01_0362 6a5a154a7bc424cafdcf9c96d35b8243 624 SUPERFAMILY SSF63380 254 470 8.11E-62 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Vc3S01_0362 6a5a154a7bc424cafdcf9c96d35b8243 624 PRINTS PR00369 Flavodoxin signature 169 179 9.0E-10 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 Vc3S01_0362 6a5a154a7bc424cafdcf9c96d35b8243 624 PRINTS PR00369 Flavodoxin signature 89 102 9.0E-10 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 Vc3S01_0362 6a5a154a7bc424cafdcf9c96d35b8243 624 PRINTS PR00369 Flavodoxin signature 193 212 9.0E-10 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 Vc3S01_0362 6a5a154a7bc424cafdcf9c96d35b8243 624 PRINTS PR00369 Flavodoxin signature 137 148 9.0E-10 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 Vc3S01_0362 6a5a154a7bc424cafdcf9c96d35b8243 624 Gene3D G3DSA:2.40.30.10 258 464 1.7E-70 T 12-10-2018 Vc3S01_0362 6a5a154a7bc424cafdcf9c96d35b8243 624 Gene3D G3DSA:3.40.50.80 470 624 1.9E-60 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Vc3S01_0362 6a5a154a7bc424cafdcf9c96d35b8243 624 Gene3D G3DSA:3.40.50.360 78 241 2.7E-46 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Vc3S01_0362 6a5a154a7bc424cafdcf9c96d35b8243 624 Hamap MF_01541 Sulfite reductase [NADPH] flavoprotein alpha-component [cysJ]. 19 624 49.05 T 12-10-2018 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Vc3S01_2472 f48697ada557d43156cb9013d58d8acb 235 Gene3D G3DSA:2.30.30.910 94 222 2.4E-36 T 12-10-2018 Vc3S01_2472 f48697ada557d43156cb9013d58d8acb 235 Pfam PF13860 FlgD Ig-like domain 119 184 5.9E-19 T 12-10-2018 IPR025965 FlgD Ig-like domain Vc3S01_2472 f48697ada557d43156cb9013d58d8acb 235 Pfam PF13861 FlgD Tudor-like domain 93 229 2.2E-15 T 12-10-2018 IPR025963 FlgD Tudor-like domain Vc3S01_2472 f48697ada557d43156cb9013d58d8acb 235 Pfam PF03963 Flagellar hook capping protein - N-terminal region 22 85 2.0E-21 T 12-10-2018 IPR005648 Flagellar hook capping protein Vc3S01_2472 f48697ada557d43156cb9013d58d8acb 235 Gene3D G3DSA:2.60.40.4070 110 196 2.4E-36 T 12-10-2018 Vc3S01_1845 f48a612efa5475fa1dd62bdf27fb579d 203 SMART SM00903 19 164 1.0E-7 T 12-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Vc3S01_1845 f48a612efa5475fa1dd62bdf27fb579d 203 Pfam PF01613 Flavin reductase like domain 22 163 6.6E-17 T 12-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Vc3S01_1845 f48a612efa5475fa1dd62bdf27fb579d 203 SUPERFAMILY SSF50475 2 197 5.89E-36 T 12-10-2018 Vc3S01_1845 f48a612efa5475fa1dd62bdf27fb579d 203 Gene3D G3DSA:2.30.110.10 1 203 1.3E-61 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Vc3S01_1814 11fc1e8c9fae047c484c8199de5373c2 570 Gene3D G3DSA:3.30.410.10 223 504 3.8E-153 T 12-10-2018 Vc3S01_1814 11fc1e8c9fae047c484c8199de5373c2 570 ProSitePatterns PS00018 EF-hand calcium-binding domain. 160 172 - T 12-10-2018 IPR018247 EF-Hand 1, calcium-binding site Vc3S01_1814 11fc1e8c9fae047c484c8199de5373c2 570 Pfam PF01494 FAD binding domain 69 114 4.2E-5 T 12-10-2018 IPR002938 FAD-binding domain GO:0071949 Vc3S01_1814 11fc1e8c9fae047c484c8199de5373c2 570 Pfam PF05199 GMC oxidoreductase 503 560 1.4E-14 T 12-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 Vc3S01_1814 11fc1e8c9fae047c484c8199de5373c2 570 SUPERFAMILY SSF54373 371 511 6.67E-10 T 12-10-2018 Vc3S01_1814 11fc1e8c9fae047c484c8199de5373c2 570 SUPERFAMILY SSF51905 63 567 7.89E-36 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_1814 11fc1e8c9fae047c484c8199de5373c2 570 Gene3D G3DSA:3.50.50.60 72 565 3.8E-153 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_A0013 a81fc96968c4e29c7704cf6f03ede8d2 360 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 4 359 26.156 T 12-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Vc3S01_A0013 a81fc96968c4e29c7704cf6f03ede8d2 360 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 10 354 1.7E-116 T 12-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Vc3S01_A0013 a81fc96968c4e29c7704cf6f03ede8d2 360 Pfam PF01098 Cell cycle protein 14 355 1.0E-98 T 12-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Vc3S01_A1131 67e17ace47edcb7508960411e7f852e2 395 SUPERFAMILY SSF53383 1 395 2.07E-100 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Vc3S01_A1131 67e17ace47edcb7508960411e7f852e2 395 Gene3D G3DSA:3.90.1150.10 11 389 8.7E-138 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Vc3S01_A1131 67e17ace47edcb7508960411e7f852e2 395 Pfam PF00155 Aminotransferase class I and II 27 389 1.3E-66 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Vc3S01_A1131 67e17ace47edcb7508960411e7f852e2 395 Gene3D G3DSA:3.40.640.10 45 312 8.7E-138 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Vc3S01_A1131 67e17ace47edcb7508960411e7f852e2 395 PRINTS PR00799 Aspartate aminotransferase signature 338 356 5.2E-28 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 Vc3S01_A1131 67e17ace47edcb7508960411e7f852e2 395 PRINTS PR00799 Aspartate aminotransferase signature 270 295 5.2E-28 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 Vc3S01_A1131 67e17ace47edcb7508960411e7f852e2 395 PRINTS PR00799 Aspartate aminotransferase signature 203 215 5.2E-28 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 Vc3S01_A1131 67e17ace47edcb7508960411e7f852e2 395 PRINTS PR00799 Aspartate aminotransferase signature 172 191 5.2E-28 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 Vc3S01_2461 a8eebc6dc838224b5bc8c9b0a65e17cc 384 Gene3D G3DSA:1.20.1330.10 292 343 4.9E-47 T 12-10-2018 Vc3S01_2461 a8eebc6dc838224b5bc8c9b0a65e17cc 384 Gene3D G3DSA:1.20.1330.10 45 172 1.7E-71 T 12-10-2018 Vc3S01_2461 a8eebc6dc838224b5bc8c9b0a65e17cc 384 Gene3D G3DSA:1.20.58.1830 349 383 4.9E-47 T 12-10-2018 Vc3S01_2461 a8eebc6dc838224b5bc8c9b0a65e17cc 384 Gene3D G3DSA:1.20.58.1830 5 33 1.7E-71 T 12-10-2018 Vc3S01_2461 a8eebc6dc838224b5bc8c9b0a65e17cc 384 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 2.4E-43 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Vc3S01_2461 a8eebc6dc838224b5bc8c9b0a65e17cc 384 SUPERFAMILY SSF64518 1 384 7.06E-98 T 12-10-2018 Vc3S01_2461 a8eebc6dc838224b5bc8c9b0a65e17cc 384 Pfam PF00700 Bacterial flagellin C-terminal helical region 299 383 3.3E-26 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Vc3S01_2461 a8eebc6dc838224b5bc8c9b0a65e17cc 384 PRINTS PR00207 Flagellin signature 111 134 1.2E-24 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Vc3S01_2461 a8eebc6dc838224b5bc8c9b0a65e17cc 384 PRINTS PR00207 Flagellin signature 37 54 1.2E-24 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Vc3S01_2461 a8eebc6dc838224b5bc8c9b0a65e17cc 384 PRINTS PR00207 Flagellin signature 76 95 1.2E-24 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Vc3S01_2461 a8eebc6dc838224b5bc8c9b0a65e17cc 384 Pfam PF07196 Flagellin hook IN motif 195 252 4.9E-10 T 12-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 Vc3S01_2461 a8eebc6dc838224b5bc8c9b0a65e17cc 384 Gene3D G3DSA:2.170.280.10 207 291 4.9E-47 T 12-10-2018 Vc3S01_0330 8d8b0476e7d5bb5d30dd665afedb5d1d 466 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 20 457 1.0E-174 T 12-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 Vc3S01_0330 8d8b0476e7d5bb5d30dd665afedb5d1d 466 Gene3D G3DSA:1.10.860.10 12 176 4.5E-53 T 12-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal Vc3S01_0330 8d8b0476e7d5bb5d30dd665afedb5d1d 466 Pfam PF03796 DnaB-like helicase C terminal domain 199 455 6.6E-112 T 12-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 Vc3S01_0330 8d8b0476e7d5bb5d30dd665afedb5d1d 466 Pfam PF00772 DnaB-like helicase N terminal domain 20 121 4.7E-35 T 12-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 Vc3S01_0330 8d8b0476e7d5bb5d30dd665afedb5d1d 466 SUPERFAMILY SSF52540 197 449 4.72E-51 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0330 8d8b0476e7d5bb5d30dd665afedb5d1d 466 SUPERFAMILY SSF48024 18 129 4.58E-37 T 12-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 Vc3S01_0330 8d8b0476e7d5bb5d30dd665afedb5d1d 466 Gene3D G3DSA:3.40.50.300 177 456 1.3E-105 T 12-10-2018 Vc3S01_0236 2aa363e9cd0dc6b9be473016dcaa8413 273 SUPERFAMILY SSF51161 8 258 2.6E-63 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily Vc3S01_0236 2aa363e9cd0dc6b9be473016dcaa8413 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 193 226 3.6E-9 T 12-10-2018 IPR001451 Hexapeptide repeat Vc3S01_0236 2aa363e9cd0dc6b9be473016dcaa8413 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 202 230 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 Vc3S01_0236 2aa363e9cd0dc6b9be473016dcaa8413 273 Pfam PF06426 Serine acetyltransferase, N-terminal 9 112 4.8E-37 T 12-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 Vc3S01_0236 2aa363e9cd0dc6b9be473016dcaa8413 273 Gene3D G3DSA:2.160.10.10 143 273 4.0E-37 T 12-10-2018 Vc3S01_0236 2aa363e9cd0dc6b9be473016dcaa8413 273 Gene3D G3DSA:1.10.3130.10 1 142 3.3E-52 T 12-10-2018 Vc3S01_0236 2aa363e9cd0dc6b9be473016dcaa8413 273 PIRSF PIRSF000441 76 266 4.1E-55 T 12-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 Vc3S01_0236 2aa363e9cd0dc6b9be473016dcaa8413 273 PIRSF PIRSF000441 7 82 160.0 T 12-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 Vc3S01_0236 2aa363e9cd0dc6b9be473016dcaa8413 273 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 82 242 1.3E-74 T 12-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 Vc3S01_0236 2aa363e9cd0dc6b9be473016dcaa8413 273 SMART SM00971 9 113 3.3E-58 T 12-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 Vc3S01_0554 c379d31acd586af7a8337fe5f1bd3db7 182 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 13 182 23.981 T 12-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 Vc3S01_0554 c379d31acd586af7a8337fe5f1bd3db7 182 Pfam PF01782 RimM N-terminal domain 15 95 5.1E-25 T 12-10-2018 IPR002676 RimM, N-terminal GO:0006364 Vc3S01_0554 c379d31acd586af7a8337fe5f1bd3db7 182 Pfam PF05239 PRC-barrel domain 103 168 4.2E-12 T 12-10-2018 IPR027275 PRC-barrel domain Vc3S01_0554 c379d31acd586af7a8337fe5f1bd3db7 182 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 14 182 8.1E-56 T 12-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 Vc3S01_0554 c379d31acd586af7a8337fe5f1bd3db7 182 SUPERFAMILY SSF50346 106 182 2.94E-20 T 12-10-2018 IPR011033 PRC-barrel-like superfamily Vc3S01_0554 c379d31acd586af7a8337fe5f1bd3db7 182 Gene3D G3DSA:2.30.30.240 101 182 5.7E-31 T 12-10-2018 Vc3S01_0554 c379d31acd586af7a8337fe5f1bd3db7 182 Gene3D G3DSA:2.40.30.60 4 100 2.7E-32 T 12-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 Vc3S01_0554 c379d31acd586af7a8337fe5f1bd3db7 182 SUPERFAMILY SSF50447 13 100 1.48E-23 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Vc3S01_A2007 3b9a89f2ee880af51bf5888c89fb6f1c 487 Gene3D G3DSA:1.10.1040.10 282 487 1.1E-74 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Vc3S01_A2007 3b9a89f2ee880af51bf5888c89fb6f1c 487 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 218 230 - T 12-10-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 Vc3S01_A2007 3b9a89f2ee880af51bf5888c89fb6f1c 487 SUPERFAMILY SSF48179 283 486 8.16E-65 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Vc3S01_A2007 3b9a89f2ee880af51bf5888c89fb6f1c 487 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 26 188 1.5E-51 T 12-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 Vc3S01_A2007 3b9a89f2ee880af51bf5888c89fb6f1c 487 Gene3D G3DSA:3.40.50.720 7 281 3.5E-110 T 12-10-2018 Vc3S01_A2007 3b9a89f2ee880af51bf5888c89fb6f1c 487 SUPERFAMILY SSF51735 5 281 8.66E-100 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_A2007 3b9a89f2ee880af51bf5888c89fb6f1c 487 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 217 463 1.5E-90 T 12-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 Vc3S01_A2007 3b9a89f2ee880af51bf5888c89fb6f1c 487 PRINTS PR00084 Mannitol dehydrogenase signature 248 263 4.3E-21 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 Vc3S01_A2007 3b9a89f2ee880af51bf5888c89fb6f1c 487 PRINTS PR00084 Mannitol dehydrogenase signature 179 192 4.3E-21 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 Vc3S01_A2007 3b9a89f2ee880af51bf5888c89fb6f1c 487 PRINTS PR00084 Mannitol dehydrogenase signature 218 231 4.3E-21 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 Vc3S01_A2007 3b9a89f2ee880af51bf5888c89fb6f1c 487 PRINTS PR00084 Mannitol dehydrogenase signature 27 37 4.3E-21 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 Vc3S01_p20137 94eddc1a437e1ef1868bb01df02aebf8 184 Pfam PF00226 DnaJ domain 119 180 1.1E-6 T 12-10-2018 IPR001623 DnaJ domain Vc3S01_p20137 94eddc1a437e1ef1868bb01df02aebf8 184 SUPERFAMILY SSF46565 114 181 3.27E-9 T 12-10-2018 IPR036869 Chaperone J-domain superfamily Vc3S01_p20137 94eddc1a437e1ef1868bb01df02aebf8 184 Gene3D G3DSA:1.10.287.110 108 184 7.3E-8 T 12-10-2018 IPR036869 Chaperone J-domain superfamily Vc3S01_A1490 ed272987b18b8713e291fcd278dab5b7 275 Gene3D G3DSA:1.10.10.60 233 275 2.0E-14 T 12-10-2018 Vc3S01_A1490 ed272987b18b8713e291fcd278dab5b7 275 SUPERFAMILY SSF51215 31 156 1.31E-17 T 12-10-2018 IPR037923 Transcription regulator HTH-like Vc3S01_A1490 ed272987b18b8713e291fcd278dab5b7 275 SMART SM00342 190 272 2.0E-29 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_A1490 ed272987b18b8713e291fcd278dab5b7 275 Pfam PF12833 Helix-turn-helix domain 196 273 1.3E-20 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_A1490 ed272987b18b8713e291fcd278dab5b7 275 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 227 268 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Vc3S01_A1490 ed272987b18b8713e291fcd278dab5b7 275 Gene3D G3DSA:1.10.10.60 170 232 2.5E-15 T 12-10-2018 Vc3S01_A1490 ed272987b18b8713e291fcd278dab5b7 275 SUPERFAMILY SSF46689 174 224 1.34E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_A1490 ed272987b18b8713e291fcd278dab5b7 275 Pfam PF02311 AraC-like ligand binding domain 18 150 1.1E-26 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 Vc3S01_A1490 ed272987b18b8713e291fcd278dab5b7 275 SUPERFAMILY SSF46689 227 274 2.2E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_0336 3cd347fd282e348a49fc051496b5e4f4 151 Gene3D G3DSA:1.10.10.10 3 89 3.7E-34 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_0336 3cd347fd282e348a49fc051496b5e4f4 151 SUPERFAMILY SSF46785 11 144 7.96E-36 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_0336 3cd347fd282e348a49fc051496b5e4f4 151 Gene3D G3DSA:3.30.1490.190 90 150 8.0E-17 T 12-10-2018 Vc3S01_0336 3cd347fd282e348a49fc051496b5e4f4 151 Pfam PF01475 Ferric uptake regulator family 19 139 3.4E-20 T 12-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 Vc3S01_A0964 3914e3158eb819c2aad334ea5930f2a8 40 SUPERFAMILY SSF52540 1 29 1.66E-6 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A0964 3914e3158eb819c2aad334ea5930f2a8 40 Pfam PF13521 AAA domain 5 39 1.8E-9 T 12-10-2018 IPR038727 NadR/Ttd14, AAA domain Vc3S01_A0964 3914e3158eb819c2aad334ea5930f2a8 40 Gene3D G3DSA:3.40.50.300 1 39 3.0E-5 T 12-10-2018 Vc3S01_A2053 7926f128a36ca6b371ae6da913aa0655 300 SUPERFAMILY SSF46785 11 112 2.55E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A2053 7926f128a36ca6b371ae6da913aa0655 300 Gene3D G3DSA:3.40.190.290 93 298 4.2E-46 T 12-10-2018 Vc3S01_A2053 7926f128a36ca6b371ae6da913aa0655 300 Pfam PF03466 LysR substrate binding domain 89 298 8.6E-35 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_A2053 7926f128a36ca6b371ae6da913aa0655 300 SUPERFAMILY SSF53850 91 298 9.46E-37 T 12-10-2018 Vc3S01_A2053 7926f128a36ca6b371ae6da913aa0655 300 Gene3D G3DSA:1.10.10.10 6 92 1.0E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A2053 7926f128a36ca6b371ae6da913aa0655 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 64 6.3E-14 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_1254 ece67fafca7a6aa2d9294a1014968699 523 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 33 520 1.5E-173 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 Vc3S01_1254 ece67fafca7a6aa2d9294a1014968699 523 ProSitePatterns PS01303 BCCT family of transporters signature. 336 345 - T 12-10-2018 IPR018093 BCCT transporter, conserved site Vc3S01_1254 ece67fafca7a6aa2d9294a1014968699 523 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 73 520 2.7E-135 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 Vc3S01_1642 83d0e3b61f36b274c7273991d5b7d4ac 171 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 4 171 1.0E-88 T 12-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Vc3S01_1642 83d0e3b61f36b274c7273991d5b7d4ac 171 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 2 171 48.886 T 12-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Vc3S01_1642 83d0e3b61f36b274c7273991d5b7d4ac 171 Pfam PF07977 FabA-like domain 28 157 4.3E-53 T 12-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Vc3S01_1642 83d0e3b61f36b274c7273991d5b7d4ac 171 SUPERFAMILY SSF54637 4 168 2.44E-52 T 12-10-2018 IPR029069 HotDog domain superfamily Vc3S01_1642 83d0e3b61f36b274c7273991d5b7d4ac 171 Gene3D G3DSA:3.10.129.10 2 171 3.7E-61 T 12-10-2018 Vc3S01_A0243 e56b717072a7237167b5a0ed27eda952 687 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 309 436 5.5E-15 T 12-10-2018 IPR000014 PAS domain Vc3S01_A0243 e56b717072a7237167b5a0ed27eda952 687 PRINTS PR00344 Bacterial sensor protein C-terminal signature 616 630 1.3E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_A0243 e56b717072a7237167b5a0ed27eda952 687 PRINTS PR00344 Bacterial sensor protein C-terminal signature 647 665 1.3E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_A0243 e56b717072a7237167b5a0ed27eda952 687 PRINTS PR00344 Bacterial sensor protein C-terminal signature 634 644 1.3E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_A0243 e56b717072a7237167b5a0ed27eda952 687 SMART SM00086 389 429 2.2E-4 T 12-10-2018 IPR001610 PAC motif Vc3S01_A0243 e56b717072a7237167b5a0ed27eda952 687 Gene3D G3DSA:3.30.450.20 300 426 1.3E-13 T 12-10-2018 Vc3S01_A0243 e56b717072a7237167b5a0ed27eda952 687 PIRSF PIRSF036431 321 687 3.5E-105 T 12-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) Vc3S01_A0243 e56b717072a7237167b5a0ed27eda952 687 PIRSF PIRSF036431 1 332 1.2E-41 T 12-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) Vc3S01_A0243 e56b717072a7237167b5a0ed27eda952 687 Gene3D G3DSA:3.30.565.10 537 687 3.8E-33 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_A0243 e56b717072a7237167b5a0ed27eda952 687 Gene3D G3DSA:3.30.450.20 59 174 1.5E-11 T 12-10-2018 Vc3S01_A0243 e56b717072a7237167b5a0ed27eda952 687 SUPERFAMILY SSF47384 457 532 1.59E-6 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Vc3S01_A0243 e56b717072a7237167b5a0ed27eda952 687 Pfam PF13426 PAS domain 324 427 2.3E-5 T 12-10-2018 IPR000014 PAS domain Vc3S01_A0243 e56b717072a7237167b5a0ed27eda952 687 SMART SM00387 577 687 1.1E-21 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_A0243 e56b717072a7237167b5a0ed27eda952 687 SMART SM00091 313 380 0.0094 T 12-10-2018 IPR000014 PAS domain Vc3S01_A0243 e56b717072a7237167b5a0ed27eda952 687 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 577 684 6.0E-19 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_A0243 e56b717072a7237167b5a0ed27eda952 687 SUPERFAMILY SSF55874 538 685 6.42E-30 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_A0243 e56b717072a7237167b5a0ed27eda952 687 SUPERFAMILY SSF55785 301 427 2.47E-12 T 12-10-2018 IPR035965 PAS domain superfamily Vc3S01_A0243 e56b717072a7237167b5a0ed27eda952 687 Gene3D G3DSA:1.10.287.130 446 532 1.0E-13 T 12-10-2018 Vc3S01_2057 22288d0e7b401432bc0709a4ed723ca0 135 SMART SM00528 88 135 8.6E-26 T 12-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 Vc3S01_2057 22288d0e7b401432bc0709a4ed723ca0 135 SUPERFAMILY SSF81273 2 58 9.22E-17 T 12-10-2018 Vc3S01_2057 22288d0e7b401432bc0709a4ed723ca0 135 Pfam PF00816 H-NS histone family 33 129 9.3E-20 T 12-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 Vc3S01_2057 22288d0e7b401432bc0709a4ed723ca0 135 Gene3D G3DSA:1.10.287.1050 1 92 5.2E-29 T 12-10-2018 IPR027454 Histone-like protein H-NS, N-terminal GO:0046983 Vc3S01_2057 22288d0e7b401432bc0709a4ed723ca0 135 SUPERFAMILY SSF81273 93 135 2.08E-12 T 12-10-2018 Vc3S01_2057 22288d0e7b401432bc0709a4ed723ca0 135 PIRSF PIRSF002096 1 135 2.2E-55 T 12-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 Vc3S01_2057 22288d0e7b401432bc0709a4ed723ca0 135 Gene3D G3DSA:4.10.430.10 93 135 4.2E-26 T 12-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 Vc3S01_0712 32ef1d5ca6ca8d635b5796718dcf66c1 455 TIGRFAM TIGR00712 glpT: glycerol-3-phosphate transporter 1 439 3.6E-236 T 12-10-2018 IPR005267 Glycerol-3-phosphate transporter GO:0015169|GO:0015794|GO:0016021 Vc3S01_0712 32ef1d5ca6ca8d635b5796718dcf66c1 455 Pfam PF07690 Major Facilitator Superfamily 34 401 1.7E-50 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Vc3S01_0712 32ef1d5ca6ca8d635b5796718dcf66c1 455 PIRSF PIRSF002808 5 452 1.1E-169 T 12-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 Vc3S01_0712 32ef1d5ca6ca8d635b5796718dcf66c1 455 Gene3D G3DSA:1.20.1250.20 241 452 1.3E-62 T 12-10-2018 Vc3S01_0712 32ef1d5ca6ca8d635b5796718dcf66c1 455 ProSitePatterns PS00942 glpT family of transporters signature. 153 169 - T 12-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 Vc3S01_0712 32ef1d5ca6ca8d635b5796718dcf66c1 455 SUPERFAMILY SSF103473 16 445 9.02E-87 T 12-10-2018 IPR036259 MFS transporter superfamily Vc3S01_0712 32ef1d5ca6ca8d635b5796718dcf66c1 455 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 418 3.1E-151 T 12-10-2018 Vc3S01_0712 32ef1d5ca6ca8d635b5796718dcf66c1 455 Gene3D G3DSA:1.20.1250.20 18 227 2.2E-58 T 12-10-2018 Vc3S01_2757 0e7fa8709bc0e581221f5664159d37a3 470 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 457 1.1E-23 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Vc3S01_2757 0e7fa8709bc0e581221f5664159d37a3 470 Gene3D G3DSA:3.50.50.60 251 398 1.1E-43 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_2757 0e7fa8709bc0e581221f5664159d37a3 470 Gene3D G3DSA:3.40.50.720 146 250 4.5E-13 T 12-10-2018 Vc3S01_2757 0e7fa8709bc0e581221f5664159d37a3 470 SUPERFAMILY SSF51971 145 399 2.3E-68 T 12-10-2018 Vc3S01_2757 0e7fa8709bc0e581221f5664159d37a3 470 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 1.4E-36 T 12-10-2018 Vc3S01_2757 0e7fa8709bc0e581221f5664159d37a3 470 PRINTS PR00419 Adrenodoxin reductase family signature 213 223 1.4E-36 T 12-10-2018 Vc3S01_2757 0e7fa8709bc0e581221f5664159d37a3 470 PRINTS PR00419 Adrenodoxin reductase family signature 288 302 1.4E-36 T 12-10-2018 Vc3S01_2757 0e7fa8709bc0e581221f5664159d37a3 470 PRINTS PR00419 Adrenodoxin reductase family signature 322 335 1.4E-36 T 12-10-2018 Vc3S01_2757 0e7fa8709bc0e581221f5664159d37a3 470 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 1.4E-36 T 12-10-2018 Vc3S01_2757 0e7fa8709bc0e581221f5664159d37a3 470 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 6 470 2.0E-250 T 12-10-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 Vc3S01_2757 0e7fa8709bc0e581221f5664159d37a3 470 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 25 134 1.0E-38 T 12-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 Vc3S01_2757 0e7fa8709bc0e581221f5664159d37a3 470 Gene3D G3DSA:1.10.1060.10 11 145 3.2E-35 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Vc3S01_2757 0e7fa8709bc0e581221f5664159d37a3 470 SUPERFAMILY SSF46548 6 157 2.25E-40 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Vc3S01_2047 6ecf77fc220f7e52100483f916fde0a3 211 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 120 206 19.491 T 12-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 Vc3S01_2047 6ecf77fc220f7e52100483f916fde0a3 211 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 123 206 7.1E-32 T 12-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 Vc3S01_2047 6ecf77fc220f7e52100483f916fde0a3 211 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 38 110 1.7E-31 T 12-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 Vc3S01_2047 6ecf77fc220f7e52100483f916fde0a3 211 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 13 211 37.536 T 12-10-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 Vc3S01_2047 6ecf77fc220f7e52100483f916fde0a3 211 Gene3D G3DSA:3.10.20.400 3 102 2.2E-36 T 12-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 Vc3S01_2047 6ecf77fc220f7e52100483f916fde0a3 211 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 123 210 4.4E-18 T 12-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 Vc3S01_2047 6ecf77fc220f7e52100483f916fde0a3 211 SUPERFAMILY SSF141734 14 122 4.05E-45 T 12-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 Vc3S01_2047 6ecf77fc220f7e52100483f916fde0a3 211 Gene3D G3DSA:1.10.287.1080 120 211 9.5E-30 T 12-10-2018 Vc3S01_2047 6ecf77fc220f7e52100483f916fde0a3 211 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 61 110 7.0E-22 T 12-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 Vc3S01_2047 6ecf77fc220f7e52100483f916fde0a3 211 SUPERFAMILY SSF101386 123 210 1.72E-25 T 12-10-2018 Vc3S01_2559 bbe86e7ce207de6aa47e528fa53d8176 80 PIRSF PIRSF006488 1 80 6.1E-21 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Vc3S01_2559 bbe86e7ce207de6aa47e528fa53d8176 80 SUPERFAMILY SSF116842 2 72 6.8E-21 T 12-10-2018 Vc3S01_2559 bbe86e7ce207de6aa47e528fa53d8176 80 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 50 2.0E-21 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Vc3S01_2559 bbe86e7ce207de6aa47e528fa53d8176 80 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 10 70 15.17 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Vc3S01_2559 bbe86e7ce207de6aa47e528fa53d8176 80 Gene3D G3DSA:1.10.287.1040 4 80 1.9E-22 T 12-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 Vc3S01_2559 bbe86e7ce207de6aa47e528fa53d8176 80 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 10 65 1.2E-20 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Vc3S01_2559 bbe86e7ce207de6aa47e528fa53d8176 80 Pfam PF02609 Exonuclease VII small subunit 11 61 3.8E-18 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Vc3S01_0256 ffbc50cdfa3ccf4676bba67c51639e33 61 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 5 59 5.7E-23 T 12-10-2018 IPR019201 Protein of unknown function DUF2065 Vc3S01_2424 9bd29458b33e5c09ef4333eedb4143ac 290 SMART SM00862 30 107 3.8E-18 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Vc3S01_2424 9bd29458b33e5c09ef4333eedb4143ac 290 SUPERFAMILY SSF46894 11 107 2.21E-18 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Vc3S01_2424 9bd29458b33e5c09ef4333eedb4143ac 290 Gene3D G3DSA:1.10.10.10 6 110 4.9E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_2424 9bd29458b33e5c09ef4333eedb4143ac 290 Pfam PF00486 Transcriptional regulatory protein, C terminal 31 107 1.3E-19 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Vc3S01_0273 29acd69719a5da366fe6e71805de4e20 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 182 197 5.7E-11 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Vc3S01_0273 29acd69719a5da366fe6e71805de4e20 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 166 182 5.7E-11 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Vc3S01_0273 29acd69719a5da366fe6e71805de4e20 210 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 30 46 - T 12-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site Vc3S01_0273 29acd69719a5da366fe6e71805de4e20 210 Pfam PF00325 Bacterial regulatory proteins, crp family 166 197 8.8E-16 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Vc3S01_0273 29acd69719a5da366fe6e71805de4e20 210 Pfam PF00027 Cyclic nucleotide-binding domain 23 109 7.0E-23 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain Vc3S01_0273 29acd69719a5da366fe6e71805de4e20 210 SUPERFAMILY SSF51206 8 137 7.33E-35 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like Vc3S01_0273 29acd69719a5da366fe6e71805de4e20 210 Gene3D G3DSA:2.60.120.10 10 138 3.0E-43 T 12-10-2018 IPR014710 RmlC-like jelly roll fold Vc3S01_0273 29acd69719a5da366fe6e71805de4e20 210 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 71 89 - T 12-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site Vc3S01_0273 29acd69719a5da366fe6e71805de4e20 210 SMART SM00419 160 208 4.2E-17 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Vc3S01_0273 29acd69719a5da366fe6e71805de4e20 210 SUPERFAMILY SSF46785 139 207 3.88E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_0273 29acd69719a5da366fe6e71805de4e20 210 Gene3D G3DSA:1.10.10.10 139 207 1.0E-35 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_0273 29acd69719a5da366fe6e71805de4e20 210 ProSitePatterns PS00042 Crp-type HTH domain signature. 168 191 - T 12-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 Vc3S01_0273 29acd69719a5da366fe6e71805de4e20 210 SMART SM00100 2 122 3.7E-27 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain Vc3S01_1347 b49fbbd4961a3e998cb29365a80015e6 255 Gene3D G3DSA:3.30.1380.10 114 240 4.3E-36 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Vc3S01_1347 b49fbbd4961a3e998cb29365a80015e6 255 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 182 240 4.1E-16 T 12-10-2018 IPR039561 Peptidase M15C GO:0008233 Vc3S01_1347 b49fbbd4961a3e998cb29365a80015e6 255 SUPERFAMILY SSF55166 115 240 1.2E-27 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Vc3S01_A0398 fbd075a9277927a6ad3fcad09d4617bc 243 SMART SM00448 10 121 1.6E-38 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A0398 fbd075a9277927a6ad3fcad09d4617bc 243 SUPERFAMILY SSF46894 142 240 1.42E-26 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Vc3S01_A0398 fbd075a9277927a6ad3fcad09d4617bc 243 SMART SM00862 163 239 4.5E-21 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Vc3S01_A0398 fbd075a9277927a6ad3fcad09d4617bc 243 Pfam PF00072 Response regulator receiver domain 12 121 6.2E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A0398 fbd075a9277927a6ad3fcad09d4617bc 243 Pfam PF00486 Transcriptional regulatory protein, C terminal 164 239 1.4E-23 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Vc3S01_A0398 fbd075a9277927a6ad3fcad09d4617bc 243 Gene3D G3DSA:3.40.50.2300 2 129 4.0E-36 T 12-10-2018 Vc3S01_A0398 fbd075a9277927a6ad3fcad09d4617bc 243 Gene3D G3DSA:1.10.10.10 130 243 1.2E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A0398 fbd075a9277927a6ad3fcad09d4617bc 243 SUPERFAMILY SSF52172 11 136 3.13E-38 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_A0410 c71de6bb0cd4cc860e4981d777cf5c14 362 Pfam PF00990 Diguanylate cyclase, GGDEF domain 229 355 5.9E-31 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A0410 c71de6bb0cd4cc860e4981d777cf5c14 362 Pfam PF11845 Protein of unknown function (DUF3365) 28 168 3.8E-23 T 12-10-2018 IPR021796 Protein of unknown function DUF3365 Vc3S01_A0410 c71de6bb0cd4cc860e4981d777cf5c14 362 SUPERFAMILY SSF55073 214 361 6.12E-33 T 12-10-2018 IPR029787 Nucleotide cyclase Vc3S01_A0410 c71de6bb0cd4cc860e4981d777cf5c14 362 SMART SM00267 196 360 1.4E-33 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A0410 c71de6bb0cd4cc860e4981d777cf5c14 362 Gene3D G3DSA:3.30.70.270 204 362 3.5E-37 T 12-10-2018 Vc3S01_A0410 c71de6bb0cd4cc860e4981d777cf5c14 362 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 210 357 7.8E-32 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_2041 1e1148ccbfb5e66acd7d0dc7aff0f0a0 192 Gene3D G3DSA:3.40.50.300 2 140 2.1E-24 T 12-10-2018 Vc3S01_2041 1e1148ccbfb5e66acd7d0dc7aff0f0a0 192 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 34.858 T 12-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 Vc3S01_2041 1e1148ccbfb5e66acd7d0dc7aff0f0a0 192 SUPERFAMILY SSF52540 2 141 1.11E-41 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2041 1e1148ccbfb5e66acd7d0dc7aff0f0a0 192 PIRSF PIRSF035805 1 192 6.7E-57 T 12-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 Vc3S01_2041 1e1148ccbfb5e66acd7d0dc7aff0f0a0 192 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 173 186 - T 12-10-2018 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 Vc3S01_2041 1e1148ccbfb5e66acd7d0dc7aff0f0a0 192 Gene3D G3DSA:3.30.60.20 144 189 1.2E-7 T 12-10-2018 Vc3S01_2041 1e1148ccbfb5e66acd7d0dc7aff0f0a0 192 SUPERFAMILY SSF57716 142 190 1.57E-16 T 12-10-2018 Vc3S01_2041 1e1148ccbfb5e66acd7d0dc7aff0f0a0 192 Pfam PF00265 Thymidine kinase 2 186 4.3E-60 T 12-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 Vc3S01_0207 4abf5b1a6d71bf06f532d3e86cf0f0ff 610 Pfam PF11412 Disulphide bond corrector protein DsbC 41 150 8.4E-29 T 12-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain Vc3S01_0207 4abf5b1a6d71bf06f532d3e86cf0f0ff 610 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 218 418 9.4E-18 T 12-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 Vc3S01_0207 4abf5b1a6d71bf06f532d3e86cf0f0ff 610 SUPERFAMILY SSF74863 39 152 2.48E-40 T 12-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily Vc3S01_0207 4abf5b1a6d71bf06f532d3e86cf0f0ff 610 Gene3D G3DSA:2.60.40.1250 35 168 6.7E-40 T 12-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily Vc3S01_0207 4abf5b1a6d71bf06f532d3e86cf0f0ff 610 Pfam PF13899 Thioredoxin-like 500 581 3.0E-15 T 12-10-2018 Vc3S01_0207 4abf5b1a6d71bf06f532d3e86cf0f0ff 610 SUPERFAMILY SSF52833 493 608 1.34E-22 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Vc3S01_0207 4abf5b1a6d71bf06f532d3e86cf0f0ff 610 ProSitePatterns PS00194 Thioredoxin family active site. 519 537 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Vc3S01_0207 4abf5b1a6d71bf06f532d3e86cf0f0ff 610 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 610 38.654 T 12-10-2018 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 Vc3S01_0207 4abf5b1a6d71bf06f532d3e86cf0f0ff 610 Gene3D G3DSA:3.40.30.10 483 610 4.6E-35 T 12-10-2018 Vc3S01_1494 972f73e067fb6d5b0e3d660b47c6d908 457 SUPERFAMILY SSF52374 7 326 1.56E-72 T 12-10-2018 Vc3S01_1494 972f73e067fb6d5b0e3d660b47c6d908 457 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 6 456 31.829 T 12-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 Vc3S01_1494 972f73e067fb6d5b0e3d660b47c6d908 457 SUPERFAMILY SSF47323 344 453 2.75E-17 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Vc3S01_1494 972f73e067fb6d5b0e3d660b47c6d908 457 Gene3D G3DSA:3.40.50.620 5 319 1.5E-121 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Vc3S01_1494 972f73e067fb6d5b0e3d660b47c6d908 457 Gene3D G3DSA:1.20.120.640 320 456 1.1E-16 T 12-10-2018 Vc3S01_1494 972f73e067fb6d5b0e3d660b47c6d908 457 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 19 327 4.4E-91 T 12-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 Vc3S01_1494 972f73e067fb6d5b0e3d660b47c6d908 457 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 6 455 1.9E-120 T 12-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 Vc3S01_1494 972f73e067fb6d5b0e3d660b47c6d908 457 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 65 74 1.9E-22 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Vc3S01_1494 972f73e067fb6d5b0e3d660b47c6d908 457 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 205 223 1.9E-22 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Vc3S01_1494 972f73e067fb6d5b0e3d660b47c6d908 457 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 29 40 1.9E-22 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Vc3S01_1494 972f73e067fb6d5b0e3d660b47c6d908 457 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 236 257 1.9E-22 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Vc3S01_A0300 00b49c836547a170a03399d0cb21fd20 374 Gene3D G3DSA:2.60.40.3120 1 112 1.0E-42 T 12-10-2018 Vc3S01_A0300 00b49c836547a170a03399d0cb21fd20 374 Gene3D G3DSA:3.40.630.10 113 374 5.3E-71 T 12-10-2018 Vc3S01_A0300 00b49c836547a170a03399d0cb21fd20 374 SMART SM00631 112 354 2.2E-4 T 12-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 Vc3S01_A0300 00b49c836547a170a03399d0cb21fd20 374 Pfam PF00246 Zinc carboxypeptidase 126 341 5.9E-24 T 12-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 Vc3S01_A0300 00b49c836547a170a03399d0cb21fd20 374 SUPERFAMILY SSF53187 106 372 3.97E-64 T 12-10-2018 Vc3S01_0919 38133d60b8e99c265e915e579dde3795 504 Pfam PF13522 Glutamine amidotransferase domain 63 207 1.4E-17 T 12-10-2018 Vc3S01_0919 38133d60b8e99c265e915e579dde3795 504 SUPERFAMILY SSF53271 249 482 4.33E-69 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like Vc3S01_0919 38133d60b8e99c265e915e579dde3795 504 SUPERFAMILY SSF56235 2 256 4.12E-71 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Vc3S01_0919 38133d60b8e99c265e915e579dde3795 504 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 463 9.6E-166 T 12-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 Vc3S01_0919 38133d60b8e99c265e915e579dde3795 504 Gene3D G3DSA:3.60.20.10 2 411 7.0E-157 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Vc3S01_0919 38133d60b8e99c265e915e579dde3795 504 Gene3D G3DSA:3.40.50.2020 276 440 7.0E-157 T 12-10-2018 Vc3S01_0919 38133d60b8e99c265e915e579dde3795 504 PIRSF PIRSF000485 1 479 9.3E-168 T 12-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 Vc3S01_0919 38133d60b8e99c265e915e579dde3795 504 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 463 44.738 T 12-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 Vc3S01_1864 df122bcda756f12e9fe6b43e6776e72c 730 Gene3D G3DSA:2.40.170.20 198 730 3.6E-80 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Vc3S01_1864 df122bcda756f12e9fe6b43e6776e72c 730 Pfam PF07715 TonB-dependent Receptor Plug Domain 88 182 3.1E-12 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain Vc3S01_1864 df122bcda756f12e9fe6b43e6776e72c 730 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 60 - T 12-10-2018 IPR010916 TonB box, conserved site Vc3S01_1864 df122bcda756f12e9fe6b43e6776e72c 730 SUPERFAMILY SSF56935 45 730 9.16E-101 T 12-10-2018 Vc3S01_1864 df122bcda756f12e9fe6b43e6776e72c 730 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 713 730 - T 12-10-2018 IPR010917 TonB-dependent receptor, conserved site Vc3S01_1864 df122bcda756f12e9fe6b43e6776e72c 730 Gene3D G3DSA:2.170.130.10 69 197 7.3E-18 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Vc3S01_1864 df122bcda756f12e9fe6b43e6776e72c 730 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 86 730 4.1E-160 T 12-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 Vc3S01_1864 df122bcda756f12e9fe6b43e6776e72c 730 Pfam PF00593 TonB dependent receptor 289 727 2.4E-30 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Vc3S01_0474 48a934c78b27e20eb8ba0257d5280c55 236 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 230 3.6E-90 T 12-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 Vc3S01_0474 48a934c78b27e20eb8ba0257d5280c55 236 PIRSF PIRSF004848 1 236 3.5E-79 T 12-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 Vc3S01_0474 48a934c78b27e20eb8ba0257d5280c55 236 Gene3D G3DSA:3.20.20.10 1 236 3.4E-89 T 12-10-2018 IPR029066 PLP-binding barrel Vc3S01_0474 48a934c78b27e20eb8ba0257d5280c55 236 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 6 229 35.292 T 12-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 Vc3S01_0474 48a934c78b27e20eb8ba0257d5280c55 236 SUPERFAMILY SSF51419 1 228 8.9E-83 T 12-10-2018 IPR029066 PLP-binding barrel Vc3S01_0474 48a934c78b27e20eb8ba0257d5280c55 236 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 80 94 - T 12-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 Vc3S01_0474 48a934c78b27e20eb8ba0257d5280c55 236 Pfam PF01168 Alanine racemase, N-terminal domain 9 230 3.6E-35 T 12-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Vc3S01_A1229 e9a87eb2895147dbff2ad9317a492bf3 1172 Pfam PF14331 ImcF-related N-terminal domain 193 450 6.4E-87 T 12-10-2018 IPR025743 ImcF-related, N-terminal domain Vc3S01_A1229 e9a87eb2895147dbff2ad9317a492bf3 1172 Pfam PF06761 Intracellular multiplication and human macrophage-killing 503 803 1.3E-75 T 12-10-2018 IPR009612 ImcF-related Vc3S01_A1229 e9a87eb2895147dbff2ad9317a492bf3 1172 Pfam PF06744 Type VI secretion protein IcmF C-terminal 927 1120 1.4E-59 T 12-10-2018 IPR010623 Type VI secretion system IcmF, C-terminal Vc3S01_A1229 e9a87eb2895147dbff2ad9317a492bf3 1172 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 17 1170 0.0 T 12-10-2018 IPR017731 Type VI secretion system, IcmF Vc3S01_A1229 e9a87eb2895147dbff2ad9317a492bf3 1172 SUPERFAMILY SSF52540 108 292 1.55E-13 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A1229 e9a87eb2895147dbff2ad9317a492bf3 1172 Gene3D G3DSA:3.40.50.300 124 317 7.4E-6 T 12-10-2018 Vc3S01_0468 f9df24042e0c9c3187fda669ff63ebf7 390 Pfam PF06969 HemN C-terminal domain 314 374 8.4E-8 T 12-10-2018 IPR010723 HemN, C-terminal Vc3S01_0468 f9df24042e0c9c3187fda669ff63ebf7 390 Gene3D G3DSA:3.80.30.20 2 304 2.5E-96 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Vc3S01_0468 f9df24042e0c9c3187fda669ff63ebf7 390 SUPERFAMILY SSF102114 4 386 4.45E-110 T 12-10-2018 Vc3S01_0468 f9df24042e0c9c3187fda669ff63ebf7 390 Pfam PF04055 Radical SAM superfamily 11 181 3.4E-18 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Vc3S01_0468 f9df24042e0c9c3187fda669ff63ebf7 390 SMART SM00729 6 227 1.4E-53 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Vc3S01_0468 f9df24042e0c9c3187fda669ff63ebf7 390 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 7 378 1.9E-136 T 12-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 Vc3S01_0984 203d29726ed465b57dc79a00b92e6441 588 Gene3D G3DSA:3.40.50.300 1 308 1.6E-15 T 12-10-2018 Vc3S01_0984 203d29726ed465b57dc79a00b92e6441 588 SUPERFAMILY SSF52540 8 556 3.59E-7 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0984 203d29726ed465b57dc79a00b92e6441 588 SUPERFAMILY SSF52540 1 291 1.6E-10 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_3175 c02c76ca410f11955ccaf3fb925ce065 315 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 306 36.789 T 12-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 Vc3S01_3175 c02c76ca410f11955ccaf3fb925ce065 315 SUPERFAMILY SSF50486 208 310 2.16E-32 T 12-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 Vc3S01_3175 c02c76ca410f11955ccaf3fb925ce065 315 Pfam PF02911 Formyl transferase, C-terminal domain 207 303 1.9E-28 T 12-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Vc3S01_3175 c02c76ca410f11955ccaf3fb925ce065 315 Gene3D G3DSA:3.10.25.10 210 314 3.9E-37 T 12-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Vc3S01_3175 c02c76ca410f11955ccaf3fb925ce065 315 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 311 7.3E-107 T 12-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 Vc3S01_3175 c02c76ca410f11955ccaf3fb925ce065 315 SUPERFAMILY SSF53328 5 210 4.45E-66 T 12-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Vc3S01_3175 c02c76ca410f11955ccaf3fb925ce065 315 Pfam PF00551 Formyl transferase 6 182 3.4E-45 T 12-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Vc3S01_3175 c02c76ca410f11955ccaf3fb925ce065 315 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 12-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Vc3S01_3175 c02c76ca410f11955ccaf3fb925ce065 315 Gene3D G3DSA:3.40.50.170 1 209 5.6E-87 T 12-10-2018 Vc3S01_p40108 8ca19566cde8e429b5f708c083638ceb 809 SUPERFAMILY SSF52540 366 690 2.12E-24 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_p40108 8ca19566cde8e429b5f708c083638ceb 809 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 159 314 3.8E-19 T 12-10-2018 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 Vc3S01_0045 53f82106b664c5486af9d52b51968cbf 723 Hamap MF_01621 Fatty acid oxidation complex subunit alpha [fadB]. 1 716 52.397 T 12-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Vc3S01_0045 53f82106b664c5486af9d52b51968cbf 723 SUPERFAMILY SSF51735 315 496 2.73E-55 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_0045 53f82106b664c5486af9d52b51968cbf 723 SUPERFAMILY SSF48179 496 604 1.45E-27 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Vc3S01_0045 53f82106b664c5486af9d52b51968cbf 723 SUPERFAMILY SSF48179 624 715 2.38E-25 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Vc3S01_0045 53f82106b664c5486af9d52b51968cbf 723 Gene3D G3DSA:3.90.226.10 1 312 9.6E-91 T 12-10-2018 Vc3S01_0045 53f82106b664c5486af9d52b51968cbf 723 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 206 3.1E-39 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 Vc3S01_0045 53f82106b664c5486af9d52b51968cbf 723 Gene3D G3DSA:1.10.1040.50 498 710 9.8E-74 T 12-10-2018 Vc3S01_0045 53f82106b664c5486af9d52b51968cbf 723 Gene3D G3DSA:3.40.50.720 314 497 9.1E-65 T 12-10-2018 Vc3S01_0045 53f82106b664c5486af9d52b51968cbf 723 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 715 0.0 T 12-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Vc3S01_0045 53f82106b664c5486af9d52b51968cbf 723 SUPERFAMILY SSF52096 2 305 8.64E-67 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Vc3S01_0045 53f82106b664c5486af9d52b51968cbf 723 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 317 495 2.1E-57 T 12-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Vc3S01_0045 53f82106b664c5486af9d52b51968cbf 723 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 494 518 - T 12-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Vc3S01_0045 53f82106b664c5486af9d52b51968cbf 723 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 628 710 5.2E-6 T 12-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Vc3S01_0045 53f82106b664c5486af9d52b51968cbf 723 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 497 593 6.3E-25 T 12-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Vc3S01_0850 49a42fd3a6cfaca4b2d952bde1e4230c 343 SUPERFAMILY SSF55874 177 335 8.64E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_0850 49a42fd3a6cfaca4b2d952bde1e4230c 343 SUPERFAMILY SSF47384 117 188 4.71E-10 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Vc3S01_0850 49a42fd3a6cfaca4b2d952bde1e4230c 343 Pfam PF13188 PAS domain 18 72 3.5E-6 T 12-10-2018 IPR000014 PAS domain Vc3S01_0850 49a42fd3a6cfaca4b2d952bde1e4230c 343 Gene3D G3DSA:3.30.450.20 9 108 2.4E-5 T 12-10-2018 Vc3S01_0850 49a42fd3a6cfaca4b2d952bde1e4230c 343 Gene3D G3DSA:1.10.287.130 109 185 2.9E-9 T 12-10-2018 Vc3S01_0850 49a42fd3a6cfaca4b2d952bde1e4230c 343 Pfam PF00512 His Kinase A (phospho-acceptor) domain 122 186 3.1E-10 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_0850 49a42fd3a6cfaca4b2d952bde1e4230c 343 SMART SM00387 231 337 4.1E-29 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_0850 49a42fd3a6cfaca4b2d952bde1e4230c 343 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 234 336 5.6E-21 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_0850 49a42fd3a6cfaca4b2d952bde1e4230c 343 Gene3D G3DSA:3.30.565.10 190 342 4.2E-38 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_0850 49a42fd3a6cfaca4b2d952bde1e4230c 343 PRINTS PR00344 Bacterial sensor protein C-terminal signature 268 282 8.9E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_0850 49a42fd3a6cfaca4b2d952bde1e4230c 343 PRINTS PR00344 Bacterial sensor protein C-terminal signature 286 296 8.9E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_0850 49a42fd3a6cfaca4b2d952bde1e4230c 343 PRINTS PR00344 Bacterial sensor protein C-terminal signature 321 334 8.9E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_0850 49a42fd3a6cfaca4b2d952bde1e4230c 343 PRINTS PR00344 Bacterial sensor protein C-terminal signature 297 315 8.9E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_0850 49a42fd3a6cfaca4b2d952bde1e4230c 343 SUPERFAMILY SSF55785 18 85 7.21E-7 T 12-10-2018 IPR035965 PAS domain superfamily Vc3S01_0850 49a42fd3a6cfaca4b2d952bde1e4230c 343 SMART SM00388 122 188 4.7E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_2726 59ef97ed9b71a200d46785a6349003d6 260 SUPERFAMILY SSF75620 2 257 1.18E-116 T 12-10-2018 Vc3S01_2726 59ef97ed9b71a200d46785a6349003d6 260 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 1 258 9.4E-140 T 12-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 Vc3S01_2726 59ef97ed9b71a200d46785a6349003d6 260 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 140 156 - T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Vc3S01_2726 59ef97ed9b71a200d46785a6349003d6 260 Gene3D G3DSA:3.30.70.1660 25 253 3.0E-96 T 12-10-2018 Vc3S01_2726 59ef97ed9b71a200d46785a6349003d6 260 Pfam PF03462 PCRF domain 1 114 7.3E-44 T 12-10-2018 IPR005139 Peptide chain release factor GO:0006415 Vc3S01_2726 59ef97ed9b71a200d46785a6349003d6 260 Gene3D G3DSA:3.30.160.20 121 216 3.0E-96 T 12-10-2018 Vc3S01_2726 59ef97ed9b71a200d46785a6349003d6 260 SMART SM00937 1 90 2.4E-36 T 12-10-2018 IPR005139 Peptide chain release factor GO:0006415 Vc3S01_2726 59ef97ed9b71a200d46785a6349003d6 260 Pfam PF00472 RF-1 domain 124 232 1.0E-40 T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Vc3S01_p20179 bc6df9e979552571e0cbaf5f0f506cb0 444 SUPERFAMILY SSF52402 149 369 1.98E-11 T 12-10-2018 Vc3S01_p20179 bc6df9e979552571e0cbaf5f0f506cb0 444 Gene3D G3DSA:3.40.50.620 148 378 2.7E-27 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Vc3S01_3020 8d1caedd88426b23b019095d9ba9058a 141 Pfam PF06146 Phosphate-starvation-inducible E 51 117 1.5E-14 T 12-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like Vc3S01_3020 8d1caedd88426b23b019095d9ba9058a 141 PIRSF PIRSF029598 3 135 3.5E-39 T 12-10-2018 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 Vc3S01_A1501 2244fe1135b6fe265c48b5f4cca373e4 295 Pfam PF03466 LysR substrate binding domain 88 289 5.0E-28 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_A1501 2244fe1135b6fe265c48b5f4cca373e4 295 Gene3D G3DSA:1.10.10.10 3 89 2.9E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A1501 2244fe1135b6fe265c48b5f4cca373e4 295 SUPERFAMILY SSF53850 89 291 1.07E-29 T 12-10-2018 Vc3S01_A1501 2244fe1135b6fe265c48b5f4cca373e4 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 62 1.1E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A1501 2244fe1135b6fe265c48b5f4cca373e4 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.9E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A1501 2244fe1135b6fe265c48b5f4cca373e4 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.9E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A1501 2244fe1135b6fe265c48b5f4cca373e4 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.9E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A1501 2244fe1135b6fe265c48b5f4cca373e4 295 Gene3D G3DSA:3.40.190.10 92 286 4.7E-41 T 12-10-2018 Vc3S01_A1501 2244fe1135b6fe265c48b5f4cca373e4 295 SUPERFAMILY SSF46785 9 88 1.43E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A1501 2244fe1135b6fe265c48b5f4cca373e4 295 Gene3D G3DSA:3.40.190.10 164 261 4.7E-41 T 12-10-2018 Vc3S01_2801 f384a68710c41a036a17d0aacb4a1ce1 355 SMART SM00228 257 339 5.0E-7 T 12-10-2018 IPR001478 PDZ domain GO:0005515 Vc3S01_2801 f384a68710c41a036a17d0aacb4a1ce1 355 PRINTS PR00834 HtrA/DegQ protease family signature 113 133 5.8E-47 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Vc3S01_2801 f384a68710c41a036a17d0aacb4a1ce1 355 PRINTS PR00834 HtrA/DegQ protease family signature 187 204 5.8E-47 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Vc3S01_2801 f384a68710c41a036a17d0aacb4a1ce1 355 PRINTS PR00834 HtrA/DegQ protease family signature 209 226 5.8E-47 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Vc3S01_2801 f384a68710c41a036a17d0aacb4a1ce1 355 PRINTS PR00834 HtrA/DegQ protease family signature 153 177 5.8E-47 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Vc3S01_2801 f384a68710c41a036a17d0aacb4a1ce1 355 PRINTS PR00834 HtrA/DegQ protease family signature 92 104 5.8E-47 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Vc3S01_2801 f384a68710c41a036a17d0aacb4a1ce1 355 PRINTS PR00834 HtrA/DegQ protease family signature 297 309 5.8E-47 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Vc3S01_2801 f384a68710c41a036a17d0aacb4a1ce1 355 Gene3D G3DSA:2.40.10.10 33 143 4.4E-33 T 12-10-2018 Vc3S01_2801 f384a68710c41a036a17d0aacb4a1ce1 355 Gene3D G3DSA:2.40.10.10 145 256 9.1E-36 T 12-10-2018 Vc3S01_2801 f384a68710c41a036a17d0aacb4a1ce1 355 Pfam PF13180 PDZ domain 258 347 6.1E-14 T 12-10-2018 IPR001478 PDZ domain GO:0005515 Vc3S01_2801 f384a68710c41a036a17d0aacb4a1ce1 355 SUPERFAMILY SSF50156 240 347 2.1E-20 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 Vc3S01_2801 f384a68710c41a036a17d0aacb4a1ce1 355 TIGRFAM TIGR02038 protease_degS: periplasmic serine peptidase DegS 2 351 3.3E-165 T 12-10-2018 IPR011783 Peptidase S1C, DegS GO:0004252|GO:0006508 Vc3S01_2801 f384a68710c41a036a17d0aacb4a1ce1 355 SUPERFAMILY SSF50494 44 266 4.61E-62 T 12-10-2018 IPR009003 Peptidase S1, PA clan Vc3S01_2801 f384a68710c41a036a17d0aacb4a1ce1 355 Gene3D G3DSA:2.30.42.10 257 355 1.6E-23 T 12-10-2018 Vc3S01_2801 f384a68710c41a036a17d0aacb4a1ce1 355 Pfam PF13365 Trypsin-like peptidase domain 83 216 2.2E-33 T 12-10-2018 Vc3S01_0137 ea56627abbeb621cdae45bd41f618fee 121 Pfam PF07226 Protein of unknown function (DUF1422) 5 115 1.6E-50 T 12-10-2018 IPR009867 Protein of unknown function DUF1422 Vc3S01_0137 ea56627abbeb621cdae45bd41f618fee 121 ProDom PD076479 MEMBRANE INNER YIJD TRANSMEMBRANE Y0323 AAA SIMILAR A ACETYL-COENZYME VV0128 1 111 2.0E-58 T 12-10-2018 IPR009867 Protein of unknown function DUF1422 Vc3S01_0411 e77ae82ccce4a68ed3a748e21dcfbe06 451 Pfam PF01769 Divalent cation transporter 323 444 2.3E-23 T 12-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 Vc3S01_0411 e77ae82ccce4a68ed3a748e21dcfbe06 451 Gene3D G3DSA:3.10.580.10 135 262 9.6E-38 T 12-10-2018 Vc3S01_0411 e77ae82ccce4a68ed3a748e21dcfbe06 451 SUPERFAMILY SSF54631 138 278 1.26E-27 T 12-10-2018 Vc3S01_0411 e77ae82ccce4a68ed3a748e21dcfbe06 451 SMART SM00924 36 139 4.3E-37 T 12-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain Vc3S01_0411 e77ae82ccce4a68ed3a748e21dcfbe06 451 Pfam PF03448 MgtE intracellular N domain 36 137 2.2E-26 T 12-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain Vc3S01_0411 e77ae82ccce4a68ed3a748e21dcfbe06 451 SUPERFAMILY SSF161093 280 450 7.59E-44 T 12-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 Vc3S01_0411 e77ae82ccce4a68ed3a748e21dcfbe06 451 SMART SM00116 212 258 0.0014 T 12-10-2018 IPR000644 CBS domain Vc3S01_0411 e77ae82ccce4a68ed3a748e21dcfbe06 451 Pfam PF00571 CBS domain 140 195 7.1E-4 T 12-10-2018 IPR000644 CBS domain Vc3S01_0411 e77ae82ccce4a68ed3a748e21dcfbe06 451 Pfam PF00571 CBS domain 214 257 7.6E-5 T 12-10-2018 IPR000644 CBS domain Vc3S01_0411 e77ae82ccce4a68ed3a748e21dcfbe06 451 SUPERFAMILY SSF158791 12 136 1.83E-30 T 12-10-2018 Vc3S01_0411 e77ae82ccce4a68ed3a748e21dcfbe06 451 TIGRFAM TIGR00400 mgtE: magnesium transporter 20 451 1.7E-87 T 12-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 Vc3S01_0411 e77ae82ccce4a68ed3a748e21dcfbe06 451 Gene3D G3DSA:1.10.357.20 277 451 4.3E-45 T 12-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain Vc3S01_0411 e77ae82ccce4a68ed3a748e21dcfbe06 451 Gene3D G3DSA:1.25.60.10 8 134 5.9E-20 T 12-10-2018 IPR038076 MgtE, N-terminal domain superfamily Vc3S01_A1986 272ff42d4ed46eff56f5a9a88156e60e 308 Gene3D G3DSA:1.10.10.10 7 93 6.5E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A1986 272ff42d4ed46eff56f5a9a88156e60e 308 Gene3D G3DSA:3.40.190.10 103 300 5.6E-50 T 12-10-2018 Vc3S01_A1986 272ff42d4ed46eff56f5a9a88156e60e 308 Gene3D G3DSA:3.40.190.10 163 274 5.6E-50 T 12-10-2018 Vc3S01_A1986 272ff42d4ed46eff56f5a9a88156e60e 308 Pfam PF03466 LysR substrate binding domain 91 304 1.1E-36 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_A1986 272ff42d4ed46eff56f5a9a88156e60e 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.6E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A1986 272ff42d4ed46eff56f5a9a88156e60e 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.6E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A1986 272ff42d4ed46eff56f5a9a88156e60e 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.6E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A1986 272ff42d4ed46eff56f5a9a88156e60e 308 SUPERFAMILY SSF53850 91 305 4.5E-36 T 12-10-2018 Vc3S01_A1986 272ff42d4ed46eff56f5a9a88156e60e 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 67 1.1E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A1986 272ff42d4ed46eff56f5a9a88156e60e 308 SUPERFAMILY SSF46785 11 114 4.61E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A0298 f9793cc947119997e25b6fde011758a5 119 Pfam PF11777 Protein of unknown function (DUF3316) 6 112 6.4E-13 T 12-10-2018 IPR016879 Uncharacterised conserved protein UCP028299 Vc3S01_A0298 f9793cc947119997e25b6fde011758a5 119 PIRSF PIRSF028299 1 118 4.6E-24 T 12-10-2018 IPR016879 Uncharacterised conserved protein UCP028299 Vc3S01_A0884 d96b963fb808f31c943de74ef532794e 273 SUPERFAMILY SSF81464 9 96 5.23E-24 T 12-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A0884 d96b963fb808f31c943de74ef532794e 273 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 1 219 3.4E-110 T 12-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 Vc3S01_A0884 d96b963fb808f31c943de74ef532794e 273 SUPERFAMILY SSF49503 99 260 8.88E-48 T 12-10-2018 IPR008972 Cupredoxin Vc3S01_A0884 d96b963fb808f31c943de74ef532794e 273 Gene3D G3DSA:1.10.287.90 7 92 2.6E-34 T 12-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A0884 d96b963fb808f31c943de74ef532794e 273 PIRSF PIRSF000292 1 271 5.5E-122 T 12-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 Vc3S01_A0884 d96b963fb808f31c943de74ef532794e 273 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 131 201 2.1E-7 T 12-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A0884 d96b963fb808f31c943de74ef532794e 273 Gene3D G3DSA:2.60.40.420 93 261 2.2E-52 T 12-10-2018 IPR008972 Cupredoxin Vc3S01_A0884 d96b963fb808f31c943de74ef532794e 273 Pfam PF06481 COX Aromatic Rich Motif 219 263 1.8E-10 T 12-10-2018 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 Vc3S01_A0269 d5ca110a44132540c54bbb07f7f15cc7 235 Pfam PF00106 short chain dehydrogenase 3 191 5.0E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A0269 d5ca110a44132540c54bbb07f7f15cc7 235 SUPERFAMILY SSF51735 3 235 3.79E-51 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_A0269 d5ca110a44132540c54bbb07f7f15cc7 235 Gene3D G3DSA:3.40.50.720 3 235 3.8E-48 T 12-10-2018 Vc3S01_A0269 d5ca110a44132540c54bbb07f7f15cc7 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 196 216 1.7E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A0269 d5ca110a44132540c54bbb07f7f15cc7 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 1.7E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A0269 d5ca110a44132540c54bbb07f7f15cc7 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 1.7E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A0269 d5ca110a44132540c54bbb07f7f15cc7 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 66 77 1.7E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A0269 d5ca110a44132540c54bbb07f7f15cc7 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 1.7E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A0520 f6b629fb9c3aa703b7b552c28407399f 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 56 8.0E-12 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Vc3S01_A0520 f6b629fb9c3aa703b7b552c28407399f 195 Pfam PF16925 Bacterial transcriptional repressor C-terminal 102 183 1.1E-8 T 12-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal Vc3S01_A0520 f6b629fb9c3aa703b7b552c28407399f 195 Gene3D G3DSA:1.10.357.10 1 193 5.0E-59 T 12-10-2018 Vc3S01_A0520 f6b629fb9c3aa703b7b552c28407399f 195 SUPERFAMILY SSF46689 2 73 1.44E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_A0520 f6b629fb9c3aa703b7b552c28407399f 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 2.7E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Vc3S01_A0520 f6b629fb9c3aa703b7b552c28407399f 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 2.7E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Vc3S01_A0520 f6b629fb9c3aa703b7b552c28407399f 195 SUPERFAMILY SSF48498 80 192 4.45E-20 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Vc3S01_0228 67be1f050f059bd0fa7422099730ff12 127 Gene3D G3DSA:1.20.1300.10 1 127 2.3E-47 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Vc3S01_0228 67be1f050f059bd0fa7422099730ff12 127 Hamap MF_00708 Fumarate reductase subunit C [frdC]. 1 127 26.956 T 12-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 Vc3S01_0228 67be1f050f059bd0fa7422099730ff12 127 PIRSF PIRSF000180 1 127 1.9E-57 T 12-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 Vc3S01_0228 67be1f050f059bd0fa7422099730ff12 127 Pfam PF02300 Fumarate reductase subunit C 2 126 1.3E-48 T 12-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 Vc3S01_0228 67be1f050f059bd0fa7422099730ff12 127 SUPERFAMILY SSF81343 1 126 5.01E-52 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Vc3S01_0228 67be1f050f059bd0fa7422099730ff12 127 ProDom PD015900 FUMARATE MEMBRANE REDUCTASE C SUBUNIT TRANSMEMBRANE INNER HYDROPHOBIC REDUCTASE POLYPEPTIDE 7 127 4.0E-54 T 12-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 Vc3S01_A1128 6fd6f125e2c367eb12d1f1057065ae8f 123 SUPERFAMILY SSF101756 20 122 2.22E-22 T 12-10-2018 IPR036700 Bacterial OB-fold superfamily Vc3S01_A1128 6fd6f125e2c367eb12d1f1057065ae8f 123 Gene3D G3DSA:2.40.50.200 18 123 1.7E-15 T 12-10-2018 IPR036700 Bacterial OB-fold superfamily Vc3S01_A1128 6fd6f125e2c367eb12d1f1057065ae8f 123 Pfam PF04076 Bacterial OB fold (BOF) protein 50 120 1.8E-9 T 12-10-2018 IPR005220 Bacterial OB-fold Vc3S01_0198 61dde5f20760d393d9cb5cedcf0e5c79 396 Gene3D G3DSA:1.20.1250.20 2 184 7.0E-18 T 12-10-2018 Vc3S01_0198 61dde5f20760d393d9cb5cedcf0e5c79 396 SUPERFAMILY SSF103473 8 373 3.4E-37 T 12-10-2018 IPR036259 MFS transporter superfamily Vc3S01_0198 61dde5f20760d393d9cb5cedcf0e5c79 396 Gene3D G3DSA:1.20.1250.20 195 385 9.3E-35 T 12-10-2018 Vc3S01_0198 61dde5f20760d393d9cb5cedcf0e5c79 396 Pfam PF12832 MFS_1 like family 13 362 8.4E-40 T 12-10-2018 IPR024989 Major facilitator superfamily associated domain Vc3S01_0198 61dde5f20760d393d9cb5cedcf0e5c79 396 PIRSF PIRSF004925 1 386 2.8E-106 T 12-10-2018 IPR026032 Probable 3-phenylpropionic acid transporter Vc3S01_0261 be44bd4668c1cf583dea32ba3273fa30 830 SUPERFAMILY SSF50249 145 244 2.1E-16 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Vc3S01_0261 be44bd4668c1cf583dea32ba3273fa30 830 ProSitePatterns PS01175 Ribonuclease II family signature. 562 586 - T 12-10-2018 IPR022966 Ribonuclease II/R, conserved site Vc3S01_0261 be44bd4668c1cf583dea32ba3273fa30 830 Gene3D G3DSA:2.40.50.140 77 155 1.7E-11 T 12-10-2018 Vc3S01_0261 be44bd4668c1cf583dea32ba3273fa30 830 Pfam PF00575 S1 RNA binding domain 650 731 6.9E-13 T 12-10-2018 IPR003029 S1 domain GO:0003676 Vc3S01_0261 be44bd4668c1cf583dea32ba3273fa30 830 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 71 733 1.5E-255 T 12-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 Vc3S01_0261 be44bd4668c1cf583dea32ba3273fa30 830 SMART SM00357 90 152 1.1E-11 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 Vc3S01_0261 be44bd4668c1cf583dea32ba3273fa30 830 SUPERFAMILY SSF50249 651 738 5.0E-22 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Vc3S01_0261 be44bd4668c1cf583dea32ba3273fa30 830 Gene3D G3DSA:2.40.50.140 653 764 4.4E-27 T 12-10-2018 Vc3S01_0261 be44bd4668c1cf583dea32ba3273fa30 830 Pfam PF08206 Ribonuclease B OB domain 91 151 5.2E-21 T 12-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain Vc3S01_0261 be44bd4668c1cf583dea32ba3273fa30 830 Pfam PF08461 Ribonuclease R winged-helix domain 27 88 5.3E-13 T 12-10-2018 IPR013668 Ribonuclease R winged-helix domain Vc3S01_0261 be44bd4668c1cf583dea32ba3273fa30 830 TIGRFAM TIGR02063 RNase_R: ribonuclease R 23 734 3.6E-275 T 12-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 Vc3S01_0261 be44bd4668c1cf583dea32ba3273fa30 830 Hamap MF_01895 Ribonuclease R [rnr]. 42 733 59.209 T 12-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 Vc3S01_0261 be44bd4668c1cf583dea32ba3273fa30 830 SMART SM00316 650 733 3.8E-14 T 12-10-2018 IPR022967 RNA-binding domain, S1 Vc3S01_0261 be44bd4668c1cf583dea32ba3273fa30 830 SUPERFAMILY SSF50249 227 650 1.2E-143 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Vc3S01_0261 be44bd4668c1cf583dea32ba3273fa30 830 SMART SM00955 267 595 5.1E-183 T 12-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 Vc3S01_0261 be44bd4668c1cf583dea32ba3273fa30 830 SUPERFAMILY SSF50249 71 154 2.62E-16 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Vc3S01_0261 be44bd4668c1cf583dea32ba3273fa30 830 Pfam PF00773 RNB domain 267 594 2.1E-108 T 12-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 Vc3S01_p30105 5e22305a8df7304ae49d1eb67ee073f1 196 Gene3D G3DSA:1.10.260.40 1 83 6.5E-14 T 12-10-2018 Vc3S01_p30105 5e22305a8df7304ae49d1eb67ee073f1 196 SUPERFAMILY SSF51306 90 193 1.08E-11 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Vc3S01_p30105 5e22305a8df7304ae49d1eb67ee073f1 196 SUPERFAMILY SSF47413 1 66 1.8E-12 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Vc3S01_p30105 5e22305a8df7304ae49d1eb67ee073f1 196 Pfam PF01381 Helix-turn-helix 8 62 7.8E-11 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Vc3S01_p30105 5e22305a8df7304ae49d1eb67ee073f1 196 SMART SM00530 7 62 1.0E-10 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Vc3S01_p30105 5e22305a8df7304ae49d1eb67ee073f1 196 Gene3D G3DSA:2.10.109.10 84 195 1.5E-5 T 12-10-2018 Vc3S01_3058 f8f042365d48b2da6c08cef8b97ad46f 147 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 30 2.4E-9 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Vc3S01_3058 f8f042365d48b2da6c08cef8b97ad46f 147 Pfam PF08334 Type II secretion system (T2SS), protein G 33 141 4.0E-42 T 12-10-2018 IPR013545 Type II secretion system protein G Vc3S01_3058 f8f042365d48b2da6c08cef8b97ad46f 147 PRINTS PR00813 Bacterial general secretion pathway protein G signature 46 64 4.2E-22 T 12-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 Vc3S01_3058 f8f042365d48b2da6c08cef8b97ad46f 147 PRINTS PR00813 Bacterial general secretion pathway protein G signature 10 35 4.2E-22 T 12-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 Vc3S01_3058 f8f042365d48b2da6c08cef8b97ad46f 147 SUPERFAMILY SSF54523 36 142 1.57E-37 T 12-10-2018 Vc3S01_3058 f8f042365d48b2da6c08cef8b97ad46f 147 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 9 142 1.5E-57 T 12-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 Vc3S01_3058 f8f042365d48b2da6c08cef8b97ad46f 147 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 30 1.8E-10 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Vc3S01_3058 f8f042365d48b2da6c08cef8b97ad46f 147 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 9 29 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Vc3S01_3058 f8f042365d48b2da6c08cef8b97ad46f 147 Gene3D G3DSA:3.30.700.10 33 141 1.4E-43 T 12-10-2018 Vc3S01_0803 799054bf435ad24a43eeb75f2681441d 252 SMART SM00849 12 166 1.2E-32 T 12-10-2018 IPR001279 Metallo-beta-lactamase Vc3S01_0803 799054bf435ad24a43eeb75f2681441d 252 PIRSF PIRSF005457 1 252 3.4E-98 T 12-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 Vc3S01_0803 799054bf435ad24a43eeb75f2681441d 252 Gene3D G3DSA:3.60.15.10 1 252 1.2E-91 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Vc3S01_0803 799054bf435ad24a43eeb75f2681441d 252 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 2 252 45.009 T 12-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 Vc3S01_0803 799054bf435ad24a43eeb75f2681441d 252 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 167 252 1.2E-25 T 12-10-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 Vc3S01_0803 799054bf435ad24a43eeb75f2681441d 252 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 252 7.8E-103 T 12-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 Vc3S01_0803 799054bf435ad24a43eeb75f2681441d 252 SUPERFAMILY SSF56281 2 252 6.94E-68 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Vc3S01_0787 a051bac053881996f3702c0ec897263f 452 Gene3D G3DSA:2.30.42.10 126 221 1.4E-32 T 12-10-2018 Vc3S01_0787 a051bac053881996f3702c0ec897263f 452 SUPERFAMILY SSF50156 196 293 3.02E-17 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 Vc3S01_0787 a051bac053881996f3702c0ec897263f 452 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 227 276 1.6E-10 T 12-10-2018 IPR001478 PDZ domain GO:0005515 Vc3S01_0787 a051bac053881996f3702c0ec897263f 452 SMART SM00228 212 281 3.0E-10 T 12-10-2018 IPR001478 PDZ domain GO:0005515 Vc3S01_0787 a051bac053881996f3702c0ec897263f 452 SMART SM00228 115 186 1.1 T 12-10-2018 IPR001478 PDZ domain GO:0005515 Vc3S01_0787 a051bac053881996f3702c0ec897263f 452 Pfam PF02163 Peptidase family M50 11 440 6.6E-88 T 12-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 Vc3S01_0787 a051bac053881996f3702c0ec897263f 452 Gene3D G3DSA:2.30.42.10 227 313 2.2E-21 T 12-10-2018 Vc3S01_0787 a051bac053881996f3702c0ec897263f 452 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 4 452 5.5E-142 T 12-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 Vc3S01_0787 a051bac053881996f3702c0ec897263f 452 SUPERFAMILY SSF50156 89 184 8.28E-11 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 Vc3S01_0079 1f1bc86dad0744e1dd83bbdaaa1e579f 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Vc3S01_0079 1f1bc86dad0744e1dd83bbdaaa1e579f 108 PIRSF PIRSF000077 2 108 1.5E-42 T 12-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Vc3S01_0079 1f1bc86dad0744e1dd83bbdaaa1e579f 108 Pfam PF00085 Thioredoxin 5 106 1.1E-32 T 12-10-2018 IPR013766 Thioredoxin domain GO:0045454 Vc3S01_0079 1f1bc86dad0744e1dd83bbdaaa1e579f 108 Gene3D G3DSA:3.40.30.10 1 108 5.6E-35 T 12-10-2018 Vc3S01_0079 1f1bc86dad0744e1dd83bbdaaa1e579f 108 PRINTS PR00421 Thioredoxin family signature 24 32 3.3E-10 T 12-10-2018 Vc3S01_0079 1f1bc86dad0744e1dd83bbdaaa1e579f 108 PRINTS PR00421 Thioredoxin family signature 72 83 3.3E-10 T 12-10-2018 Vc3S01_0079 1f1bc86dad0744e1dd83bbdaaa1e579f 108 PRINTS PR00421 Thioredoxin family signature 32 41 3.3E-10 T 12-10-2018 Vc3S01_0079 1f1bc86dad0744e1dd83bbdaaa1e579f 108 SUPERFAMILY SSF52833 3 107 3.72E-38 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Vc3S01_0079 1f1bc86dad0744e1dd83bbdaaa1e579f 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 3.5E-37 T 12-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Vc3S01_2055 782394c5170c3766d8ecfd0275aff530 318 Gene3D G3DSA:3.40.50.300 17 193 1.2E-58 T 12-10-2018 Vc3S01_2055 782394c5170c3766d8ecfd0275aff530 318 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 297 317 1.0E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Vc3S01_2055 782394c5170c3766d8ecfd0275aff530 318 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 280 297 1.0E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Vc3S01_2055 782394c5170c3766d8ecfd0275aff530 318 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 233 242 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Vc3S01_2055 782394c5170c3766d8ecfd0275aff530 318 SUPERFAMILY SSF46689 233 316 5.38E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_2055 782394c5170c3766d8ecfd0275aff530 318 Gene3D G3DSA:1.10.8.60 194 257 2.5E-20 T 12-10-2018 Vc3S01_2055 782394c5170c3766d8ecfd0275aff530 318 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 109 124 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Vc3S01_2055 782394c5170c3766d8ecfd0275aff530 318 SMART SM00382 43 187 1.4E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_2055 782394c5170c3766d8ecfd0275aff530 318 Pfam PF00158 Sigma-54 interaction domain 23 189 4.4E-64 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Vc3S01_2055 782394c5170c3766d8ecfd0275aff530 318 SUPERFAMILY SSF52540 23 261 1.33E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2055 782394c5170c3766d8ecfd0275aff530 318 Gene3D G3DSA:1.10.10.60 266 318 7.3E-14 T 12-10-2018 Vc3S01_2055 782394c5170c3766d8ecfd0275aff530 318 Pfam PF02954 Bacterial regulatory protein, Fis family 274 314 1.2E-10 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Vc3S01_1383 5a21ad0285dbf36f89c81acc07d5d476 205 Gene3D G3DSA:3.40.50.620 82 168 5.5E-6 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Vc3S01_1383 5a21ad0285dbf36f89c81acc07d5d476 205 Pfam PF02698 DUF218 domain 47 168 6.6E-27 T 12-10-2018 IPR003848 Domain of unknown function DUF218 Vc3S01_1815 6c1959bb1eea5d0c5178da04cef6c220 393 Gene3D G3DSA:3.20.20.450 148 386 8.6E-15 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_1815 6c1959bb1eea5d0c5178da04cef6c220 393 Gene3D G3DSA:3.40.50.2300 2 140 3.5E-23 T 12-10-2018 Vc3S01_1815 6c1959bb1eea5d0c5178da04cef6c220 393 SUPERFAMILY SSF141868 151 383 7.59E-17 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_1815 6c1959bb1eea5d0c5178da04cef6c220 393 SUPERFAMILY SSF52172 4 133 3.84E-21 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_1815 6c1959bb1eea5d0c5178da04cef6c220 393 Pfam PF00072 Response regulator receiver domain 5 119 5.5E-19 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_1815 6c1959bb1eea5d0c5178da04cef6c220 393 Pfam PF00563 EAL domain 152 371 6.1E-12 T 12-10-2018 IPR001633 EAL domain Vc3S01_1815 6c1959bb1eea5d0c5178da04cef6c220 393 SMART SM00448 3 124 1.1E-17 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A1173 2d9a3e3cb5ff6c8b369b42169430ef2d 252 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 11 244 7.8E-94 T 12-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Vc3S01_A1173 2d9a3e3cb5ff6c8b369b42169430ef2d 252 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 16 30 - T 12-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Vc3S01_A1173 2d9a3e3cb5ff6c8b369b42169430ef2d 252 Gene3D G3DSA:3.30.950.10 127 250 3.8E-44 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Vc3S01_A1173 2d9a3e3cb5ff6c8b369b42169430ef2d 252 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 91 124 - T 12-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Vc3S01_A1173 2d9a3e3cb5ff6c8b369b42169430ef2d 252 SUPERFAMILY SSF53790 6 250 1.14E-78 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Vc3S01_A1173 2d9a3e3cb5ff6c8b369b42169430ef2d 252 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 14 222 6.7E-48 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Vc3S01_A1173 2d9a3e3cb5ff6c8b369b42169430ef2d 252 Gene3D G3DSA:3.40.1010.10 10 126 2.4E-44 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Vc3S01_A1348 daa1876ac71aaa4d3feb4c6dd2813223 327 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 38 170 5.5E-61 T 12-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 Vc3S01_A1348 daa1876ac71aaa4d3feb4c6dd2813223 327 SUPERFAMILY SSF52540 5 301 4.12E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A1348 daa1876ac71aaa4d3feb4c6dd2813223 327 Gene3D G3DSA:1.10.8.300 210 324 1.5E-35 T 12-10-2018 Vc3S01_A1348 daa1876ac71aaa4d3feb4c6dd2813223 327 Gene3D G3DSA:3.40.50.300 1 209 1.3E-51 T 12-10-2018 Vc3S01_A1348 daa1876ac71aaa4d3feb4c6dd2813223 327 PIRSF PIRSF002849 1 327 7.7E-128 T 12-10-2018 Vc3S01_A0602 48d77ff8dacaef61918be4ab9ea4d476 204 Pfam PF08218 Citrate lyase ligase C-terminal domain 19 200 4.5E-59 T 12-10-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 Vc3S01_A0602 48d77ff8dacaef61918be4ab9ea4d476 204 Gene3D G3DSA:3.40.50.620 25 204 3.1E-20 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Vc3S01_A0602 48d77ff8dacaef61918be4ab9ea4d476 204 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 1 200 7.0E-44 T 12-10-2018 Vc3S01_A0602 48d77ff8dacaef61918be4ab9ea4d476 204 SMART SM00764 19 200 2.9E-58 T 12-10-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 Vc3S01_A0602 48d77ff8dacaef61918be4ab9ea4d476 204 SUPERFAMILY SSF52374 25 202 2.78E-19 T 12-10-2018 Vc3S01_0939 8df1cafb4e48041c7049cb4c2bd45d6f 94 SUPERFAMILY SSF54909 1 94 2.52E-27 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel Vc3S01_0939 8df1cafb4e48041c7049cb4c2bd45d6f 94 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 73 2.6E-15 T 12-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain Vc3S01_0939 8df1cafb4e48041c7049cb4c2bd45d6f 94 Gene3D G3DSA:3.30.70.100 1 94 1.9E-29 T 12-10-2018 Vc3S01_2430 457d05046d06f1fe0ebcf6189d592910 135 SMART SM00116 83 130 1.0E-4 T 12-10-2018 IPR000644 CBS domain Vc3S01_2430 457d05046d06f1fe0ebcf6189d592910 135 SMART SM00116 16 65 110.0 T 12-10-2018 IPR000644 CBS domain Vc3S01_2430 457d05046d06f1fe0ebcf6189d592910 135 Gene3D G3DSA:3.10.580.10 1 134 1.5E-25 T 12-10-2018 Vc3S01_2430 457d05046d06f1fe0ebcf6189d592910 135 SUPERFAMILY SSF54631 7 126 3.28E-23 T 12-10-2018 Vc3S01_2430 457d05046d06f1fe0ebcf6189d592910 135 Pfam PF00571 CBS domain 78 125 1.2E-9 T 12-10-2018 IPR000644 CBS domain Vc3S01_2410 a16c8b05d33c5dce75864ae3f31a40f5 167 Gene3D G3DSA:3.10.129.10 18 157 3.0E-27 T 12-10-2018 Vc3S01_2410 a16c8b05d33c5dce75864ae3f31a40f5 167 Pfam PF14539 Domain of unknown function (DUF4442) 17 151 9.1E-24 T 12-10-2018 IPR027961 Protein of unknown function DUF4442 Vc3S01_2410 a16c8b05d33c5dce75864ae3f31a40f5 167 SUPERFAMILY SSF54637 10 156 8.21E-24 T 12-10-2018 IPR029069 HotDog domain superfamily Vc3S01_A0009 774ac07e77823d6e329394784d1f5082 251 Gene3D G3DSA:3.40.190.10 33 250 1.8E-14 T 12-10-2018 Vc3S01_A0009 774ac07e77823d6e329394784d1f5082 251 Gene3D G3DSA:3.40.190.10 110 212 1.8E-14 T 12-10-2018 Vc3S01_A0009 774ac07e77823d6e329394784d1f5082 251 SUPERFAMILY SSF53850 27 250 1.68E-22 T 12-10-2018 Vc3S01_A0009 774ac07e77823d6e329394784d1f5082 251 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 30 250 5.7E-11 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Vc3S01_A0434 480aaf0e4a0e151a737cc1ad5c4e3c8c 393 SUPERFAMILY SSF103473 6 378 1.18E-36 T 12-10-2018 IPR036259 MFS transporter superfamily Vc3S01_A0434 480aaf0e4a0e151a737cc1ad5c4e3c8c 393 Pfam PF07690 Major Facilitator Superfamily 15 345 7.3E-15 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Vc3S01_A0434 480aaf0e4a0e151a737cc1ad5c4e3c8c 393 Gene3D G3DSA:1.20.1250.20 200 382 2.4E-14 T 12-10-2018 Vc3S01_A0434 480aaf0e4a0e151a737cc1ad5c4e3c8c 393 Gene3D G3DSA:1.20.1250.20 6 198 4.2E-7 T 12-10-2018 Vc3S01_A1126 e792ac7b228ed1db5967581fa0727a2f 250 Gene3D G3DSA:3.40.190.10 104 215 5.6E-78 T 12-10-2018 Vc3S01_A1126 e792ac7b228ed1db5967581fa0727a2f 250 Pfam PF13531 Bacterial extracellular solute-binding protein 26 250 3.0E-47 T 12-10-2018 Vc3S01_A1126 e792ac7b228ed1db5967581fa0727a2f 250 SUPERFAMILY SSF53850 25 250 2.45E-62 T 12-10-2018 Vc3S01_A1126 e792ac7b228ed1db5967581fa0727a2f 250 PIRSF PIRSF004846 2 250 1.2E-70 T 12-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 Vc3S01_A1126 e792ac7b228ed1db5967581fa0727a2f 250 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 31 248 6.8E-62 T 12-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 Vc3S01_A1126 e792ac7b228ed1db5967581fa0727a2f 250 Gene3D G3DSA:3.40.190.10 28 249 5.6E-78 T 12-10-2018 Vc3S01_0396 c1eeeb1e2108cd5162040211ced02813 347 Gene3D G3DSA:3.30.420.40 14 331 5.4E-131 T 12-10-2018 Vc3S01_0396 c1eeeb1e2108cd5162040211ced02813 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 339 1.4E-165 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Vc3S01_0396 c1eeeb1e2108cd5162040211ced02813 347 Gene3D G3DSA:3.90.640.10 190 263 5.4E-131 T 12-10-2018 Vc3S01_0396 c1eeeb1e2108cd5162040211ced02813 347 SUPERFAMILY SSF53067 154 340 5.11E-50 T 12-10-2018 Vc3S01_0396 c1eeeb1e2108cd5162040211ced02813 347 SUPERFAMILY SSF53067 9 152 2.35E-37 T 12-10-2018 Vc3S01_0396 c1eeeb1e2108cd5162040211ced02813 347 Pfam PF06723 MreB/Mbl protein 11 338 1.8E-148 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Vc3S01_0396 c1eeeb1e2108cd5162040211ced02813 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 2.5E-63 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Vc3S01_0396 c1eeeb1e2108cd5162040211ced02813 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 2.5E-63 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Vc3S01_0396 c1eeeb1e2108cd5162040211ced02813 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 2.5E-63 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Vc3S01_0396 c1eeeb1e2108cd5162040211ced02813 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 2.5E-63 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Vc3S01_0396 c1eeeb1e2108cd5162040211ced02813 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 2.5E-63 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Vc3S01_0396 c1eeeb1e2108cd5162040211ced02813 347 Gene3D G3DSA:3.30.420.40 158 321 5.4E-131 T 12-10-2018 Vc3S01_2517 6e5f48c5b91ddcf26593e3bc29180200 493 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 48 440 3.0E-98 T 12-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 Vc3S01_2517 6e5f48c5b91ddcf26593e3bc29180200 493 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 1 477 22.482 T 12-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 Vc3S01_2517 6e5f48c5b91ddcf26593e3bc29180200 493 Pfam PF00795 Carbon-nitrogen hydrolase 208 457 1.4E-38 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Vc3S01_2517 6e5f48c5b91ddcf26593e3bc29180200 493 SUPERFAMILY SSF56317 201 472 1.31E-40 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Vc3S01_2517 6e5f48c5b91ddcf26593e3bc29180200 493 Gene3D G3DSA:3.60.110.10 195 463 1.8E-15 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Vc3S01_2766 640a434c5be9a12ef9c163578a1ce8ef 1077 SMART SM00851 955 1041 3.5E-25 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain Vc3S01_2766 640a434c5be9a12ef9c163578a1ce8ef 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 1.6E-64 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Vc3S01_2766 640a434c5be9a12ef9c163578a1ce8ef 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 1.6E-64 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Vc3S01_2766 640a434c5be9a12ef9c163578a1ce8ef 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 1.6E-64 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Vc3S01_2766 640a434c5be9a12ef9c163578a1ce8ef 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 1.6E-64 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Vc3S01_2766 640a434c5be9a12ef9c163578a1ce8ef 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 1.6E-64 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Vc3S01_2766 640a434c5be9a12ef9c163578a1ce8ef 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 1.6E-64 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Vc3S01_2766 640a434c5be9a12ef9c163578a1ce8ef 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 1.6E-64 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Vc3S01_2766 640a434c5be9a12ef9c163578a1ce8ef 1077 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 838 845 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Vc3S01_2766 640a434c5be9a12ef9c163578a1ce8ef 1077 Gene3D G3DSA:3.40.50.20 554 662 3.7E-49 T 12-10-2018 Vc3S01_2766 640a434c5be9a12ef9c163578a1ce8ef 1077 Gene3D G3DSA:1.10.1030.10 404 553 5.4E-52 T 12-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Vc3S01_2766 640a434c5be9a12ef9c163578a1ce8ef 1077 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1067 13.339 T 12-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Vc3S01_2766 640a434c5be9a12ef9c163578a1ce8ef 1077 SUPERFAMILY SSF52440 556 675 3.17E-49 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Vc3S01_2766 640a434c5be9a12ef9c163578a1ce8ef 1077 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 2.7E-72 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Vc3S01_2766 640a434c5be9a12ef9c163578a1ce8ef 1077 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 673 874 5.8E-37 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Vc3S01_2766 640a434c5be9a12ef9c163578a1ce8ef 1077 Pfam PF02142 MGS-like domain 956 1041 1.0E-15 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain Vc3S01_2766 640a434c5be9a12ef9c163578a1ce8ef 1077 SUPERFAMILY SSF52335 936 1071 7.2E-34 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Vc3S01_2766 640a434c5be9a12ef9c163578a1ce8ef 1077 SUPERFAMILY SSF56059 128 401 1.94E-108 T 12-10-2018 Vc3S01_2766 640a434c5be9a12ef9c163578a1ce8ef 1077 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1052 0.0 T 12-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Vc3S01_2766 640a434c5be9a12ef9c163578a1ce8ef 1077 Gene3D G3DSA:3.40.50.20 1 116 1.4E-50 T 12-10-2018 Vc3S01_2766 640a434c5be9a12ef9c163578a1ce8ef 1077 Gene3D G3DSA:3.30.470.20 665 934 4.1E-123 T 12-10-2018 Vc3S01_2766 640a434c5be9a12ef9c163578a1ce8ef 1077 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Vc3S01_2766 640a434c5be9a12ef9c163578a1ce8ef 1077 SUPERFAMILY SSF48108 396 554 4.84E-52 T 12-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Vc3S01_2766 640a434c5be9a12ef9c163578a1ce8ef 1077 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Vc3S01_2766 640a434c5be9a12ef9c163578a1ce8ef 1077 SMART SM01096 424 547 7.0E-75 T 12-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Vc3S01_2766 640a434c5be9a12ef9c163578a1ce8ef 1077 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1062 13.073 T 12-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Vc3S01_2766 640a434c5be9a12ef9c163578a1ce8ef 1077 Gene3D G3DSA:3.30.470.20 119 403 7.2E-129 T 12-10-2018 Vc3S01_2766 640a434c5be9a12ef9c163578a1ce8ef 1077 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 1.6E-40 T 12-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Vc3S01_2766 640a434c5be9a12ef9c163578a1ce8ef 1077 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 709 723 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Vc3S01_2766 640a434c5be9a12ef9c163578a1ce8ef 1077 SUPERFAMILY SSF56059 673 932 3.71E-103 T 12-10-2018 Vc3S01_2766 640a434c5be9a12ef9c163578a1ce8ef 1077 Gene3D G3DSA:3.40.50.1380 937 1072 3.5E-33 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Vc3S01_2766 640a434c5be9a12ef9c163578a1ce8ef 1077 SUPERFAMILY SSF52440 1 127 1.58E-50 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Vc3S01_A0183 14c5c9a19a1583e218dff798f066d474 156 Gene3D G3DSA:3.40.50.1000 1 156 3.6E-30 T 12-10-2018 IPR023214 HAD superfamily Vc3S01_A0183 14c5c9a19a1583e218dff798f066d474 156 SUPERFAMILY SSF56784 4 141 2.18E-24 T 12-10-2018 IPR036412 HAD-like superfamily Vc3S01_A0183 14c5c9a19a1583e218dff798f066d474 156 Pfam PF13419 Haloacid dehalogenase-like hydrolase 24 130 1.6E-12 T 12-10-2018 Vc3S01_2477 d705147871eabc0dc690979620deb38d 216 Pfam PF13144 Chaperone for flagella basal body P-ring formation 17 214 7.5E-55 T 12-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal Vc3S01_2477 d705147871eabc0dc690979620deb38d 216 Gene3D G3DSA:2.30.30.760 156 216 1.5E-12 T 12-10-2018 Vc3S01_2477 d705147871eabc0dc690979620deb38d 216 SMART SM00858 94 156 3.9E-10 T 12-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 Vc3S01_2477 d705147871eabc0dc690979620deb38d 216 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 82 214 1.4E-41 T 12-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal Vc3S01_1844 bd756b94a8e6ecf2e3950d1b2d92bea9 347 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 2 345 2.6E-129 T 12-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Vc3S01_1844 bd756b94a8e6ecf2e3950d1b2d92bea9 347 Gene3D G3DSA:3.40.50.10210 50 328 1.3E-120 T 12-10-2018 Vc3S01_1844 bd756b94a8e6ecf2e3950d1b2d92bea9 347 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 1 347 35.577 T 12-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Vc3S01_1844 bd756b94a8e6ecf2e3950d1b2d92bea9 347 SUPERFAMILY SSF52733 2 346 2.49E-111 T 12-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Vc3S01_1844 bd756b94a8e6ecf2e3950d1b2d92bea9 347 Pfam PF02277 Phosphoribosyltransferase 2 345 1.3E-125 T 12-10-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Vc3S01_1844 bd756b94a8e6ecf2e3950d1b2d92bea9 347 Gene3D G3DSA:1.10.1610.10 12 345 1.3E-120 T 12-10-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Vc3S01_A1569 ab05e6f092a62234027172a1f6b56017 998 Gene3D G3DSA:3.30.70.1440 620 817 2.3E-291 T 12-10-2018 Vc3S01_A1569 ab05e6f092a62234027172a1f6b56017 998 Pfam PF00873 AcrB/AcrD/AcrF family 2 978 0.0 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_A1569 ab05e6f092a62234027172a1f6b56017 998 Gene3D G3DSA:1.20.1640.10 287 463 2.3E-291 T 12-10-2018 Vc3S01_A1569 ab05e6f092a62234027172a1f6b56017 998 Gene3D G3DSA:3.30.70.1320 86 286 2.3E-291 T 12-10-2018 Vc3S01_A1569 ab05e6f092a62234027172a1f6b56017 998 SUPERFAMILY SSF82693 516 622 7.85E-24 T 12-10-2018 Vc3S01_A1569 ab05e6f092a62234027172a1f6b56017 998 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 2 989 0.0 T 12-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 Vc3S01_A1569 ab05e6f092a62234027172a1f6b56017 998 SUPERFAMILY SSF82693 89 284 2.22E-21 T 12-10-2018 Vc3S01_A1569 ab05e6f092a62234027172a1f6b56017 998 SUPERFAMILY SSF82714 136 226 1.83E-23 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Vc3S01_A1569 ab05e6f092a62234027172a1f6b56017 998 Gene3D G3DSA:3.30.2090.10 672 760 2.3E-291 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Vc3S01_A1569 ab05e6f092a62234027172a1f6b56017 998 SUPERFAMILY SSF82693 2 84 1.49E-19 T 12-10-2018 Vc3S01_A1569 ab05e6f092a62234027172a1f6b56017 998 Gene3D G3DSA:1.20.1640.10 464 975 2.3E-291 T 12-10-2018 Vc3S01_A1569 ab05e6f092a62234027172a1f6b56017 998 Gene3D G3DSA:3.30.2090.10 132 229 2.3E-291 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Vc3S01_A1569 ab05e6f092a62234027172a1f6b56017 998 SUPERFAMILY SSF82866 251 451 5.23E-53 T 12-10-2018 Vc3S01_A1569 ab05e6f092a62234027172a1f6b56017 998 SUPERFAMILY SSF82866 782 978 8.37E-44 T 12-10-2018 Vc3S01_A1569 ab05e6f092a62234027172a1f6b56017 998 PRINTS PR00702 Acriflavin resistance protein family signature 399 422 1.2E-70 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_A1569 ab05e6f092a62234027172a1f6b56017 998 PRINTS PR00702 Acriflavin resistance protein family signature 503 520 1.2E-70 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_A1569 ab05e6f092a62234027172a1f6b56017 998 PRINTS PR00702 Acriflavin resistance protein family signature 317 338 1.2E-70 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_A1569 ab05e6f092a62234027172a1f6b56017 998 PRINTS PR00702 Acriflavin resistance protein family signature 424 447 1.2E-70 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_A1569 ab05e6f092a62234027172a1f6b56017 998 PRINTS PR00702 Acriflavin resistance protein family signature 345 369 1.2E-70 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_A1569 ab05e6f092a62234027172a1f6b56017 998 PRINTS PR00702 Acriflavin resistance protein family signature 572 586 1.2E-70 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_A1569 ab05e6f092a62234027172a1f6b56017 998 PRINTS PR00702 Acriflavin resistance protein family signature 290 313 1.2E-70 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_A1569 ab05e6f092a62234027172a1f6b56017 998 SUPERFAMILY SSF82714 673 757 5.36E-21 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Vc3S01_A1569 ab05e6f092a62234027172a1f6b56017 998 Gene3D G3DSA:3.30.70.1430 518 619 2.3E-291 T 12-10-2018 Vc3S01_A1569 ab05e6f092a62234027172a1f6b56017 998 Gene3D G3DSA:3.30.70.1430 2 768 2.3E-291 T 12-10-2018 Vc3S01_A1569 ab05e6f092a62234027172a1f6b56017 998 SUPERFAMILY SSF82693 623 808 8.2E-24 T 12-10-2018 Vc3S01_2613 8c9ef52125fe2c8e942cfc5127fe5af2 649 Gene3D G3DSA:1.10.287.950 322 649 3.0E-66 T 12-10-2018 Vc3S01_2613 8c9ef52125fe2c8e942cfc5127fe5af2 649 SUPERFAMILY SSF58104 353 649 2.22E-64 T 12-10-2018 Vc3S01_2613 8c9ef52125fe2c8e942cfc5127fe5af2 649 Pfam PF02743 Cache domain 48 281 1.2E-14 T 12-10-2018 IPR033479 Double Cache domain 1 Vc3S01_2613 8c9ef52125fe2c8e942cfc5127fe5af2 649 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 460 614 4.4E-39 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Vc3S01_2613 8c9ef52125fe2c8e942cfc5127fe5af2 649 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 189 204 1.1E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Vc3S01_2613 8c9ef52125fe2c8e942cfc5127fe5af2 649 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 408 437 1.1E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Vc3S01_2613 8c9ef52125fe2c8e942cfc5127fe5af2 649 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 514 543 1.1E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Vc3S01_2613 8c9ef52125fe2c8e942cfc5127fe5af2 649 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 485 512 1.1E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Vc3S01_2613 8c9ef52125fe2c8e942cfc5127fe5af2 649 SMART SM00283 387 648 6.3E-55 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Vc3S01_2805 f5af16f9855956f53de30c4e815e3e16 243 SUPERFAMILY SSF56300 5 228 9.71E-53 T 12-10-2018 Vc3S01_2805 f5af16f9855956f53de30c4e815e3e16 243 Pfam PF00149 Calcineurin-like phosphoesterase 8 175 2.5E-13 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Vc3S01_2805 f5af16f9855956f53de30c4e815e3e16 243 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 174 229 9.0E-23 T 12-10-2018 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 Vc3S01_2805 f5af16f9855956f53de30c4e815e3e16 243 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 1 229 38.075 T 12-10-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 Vc3S01_2805 f5af16f9855956f53de30c4e815e3e16 243 Gene3D G3DSA:3.60.21.10 1 240 2.3E-63 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like Vc3S01_A1970 a88c1057f0ef2cbd74c38a371de7ed09 451 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 186 417 8.1E-11 T 12-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase Vc3S01_A1970 a88c1057f0ef2cbd74c38a371de7ed09 451 Gene3D G3DSA:3.60.10.10 176 444 6.3E-64 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Vc3S01_A1970 a88c1057f0ef2cbd74c38a371de7ed09 451 SUPERFAMILY SSF56219 183 445 2.36E-57 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Vc3S01_2924 fa2b6ea283a1d2ae93ee95c140b5adcb 58 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 58 9.1E-27 T 12-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_2924 fa2b6ea283a1d2ae93ee95c140b5adcb 58 PIRSF PIRSF002211 1 58 1.3E-28 T 12-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_2924 fa2b6ea283a1d2ae93ee95c140b5adcb 58 ProSitePatterns PS00634 Ribosomal protein L30 signature. 22 54 - T 12-10-2018 IPR018038 Ribosomal protein L30, conserved site Vc3S01_2924 fa2b6ea283a1d2ae93ee95c140b5adcb 58 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 22.06 T 12-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_2924 fa2b6ea283a1d2ae93ee95c140b5adcb 58 Gene3D G3DSA:3.30.1390.20 1 58 3.6E-28 T 12-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily Vc3S01_2924 fa2b6ea283a1d2ae93ee95c140b5adcb 58 SUPERFAMILY SSF55129 1 58 1.83E-23 T 12-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily Vc3S01_2924 fa2b6ea283a1d2ae93ee95c140b5adcb 58 Pfam PF00327 Ribosomal protein L30p/L7e 4 54 2.6E-21 T 12-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain Vc3S01_2936 b0d364e468acde3e90694ae9e23c8932 232 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 1.5E-40 T 12-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_2936 b0d364e468acde3e90694ae9e23c8932 232 Pfam PF07650 KH domain 38 111 6.7E-19 T 12-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_2936 b0d364e468acde3e90694ae9e23c8932 232 SMART SM00322 60 125 7.7E-8 T 12-10-2018 IPR004087 K Homology domain GO:0003676 Vc3S01_2936 b0d364e468acde3e90694ae9e23c8932 232 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 4.2E-97 T 12-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 Vc3S01_2936 b0d364e468acde3e90694ae9e23c8932 232 Gene3D G3DSA:3.30.1140.32 108 208 3.6E-44 T 12-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_2936 b0d364e468acde3e90694ae9e23c8932 232 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 38.593 T 12-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 Vc3S01_2936 b0d364e468acde3e90694ae9e23c8932 232 SUPERFAMILY SSF54814 2 106 1.57E-36 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Vc3S01_2936 b0d364e468acde3e90694ae9e23c8932 232 SUPERFAMILY SSF54821 108 206 1.57E-39 T 12-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_2936 b0d364e468acde3e90694ae9e23c8932 232 Gene3D G3DSA:3.30.300.20 17 107 3.7E-29 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta Vc3S01_2936 b0d364e468acde3e90694ae9e23c8932 232 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 12-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_A0291 593667284276d4c1df7adbe231ba26aa 336 PIRSF PIRSF002825 2 329 2.8E-79 T 12-10-2018 IPR026045 Ferric binding protein Vc3S01_A0291 593667284276d4c1df7adbe231ba26aa 336 Gene3D G3DSA:3.40.190.10 30 297 7.3E-79 T 12-10-2018 Vc3S01_A0291 593667284276d4c1df7adbe231ba26aa 336 Pfam PF13343 Bacterial extracellular solute-binding protein 75 293 1.4E-26 T 12-10-2018 Vc3S01_A0291 593667284276d4c1df7adbe231ba26aa 336 TIGRFAM TIGR03261 phnS2: putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein 6 333 1.9E-159 T 12-10-2018 IPR017663 ABC transport system, 1-aminoethylphosphonate-binding protein, putative Vc3S01_A0291 593667284276d4c1df7adbe231ba26aa 336 Gene3D G3DSA:3.40.190.10 133 311 7.3E-79 T 12-10-2018 Vc3S01_A0291 593667284276d4c1df7adbe231ba26aa 336 SUPERFAMILY SSF53850 27 326 2.74E-63 T 12-10-2018 Vc3S01_A1010 a3e0db77d01bc04177e76107e0cc84ad 424 Gene3D G3DSA:3.20.20.70 26 419 7.1E-109 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_A1010 a3e0db77d01bc04177e76107e0cc84ad 424 Pfam PF04055 Radical SAM superfamily 37 206 4.2E-12 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Vc3S01_A1010 a3e0db77d01bc04177e76107e0cc84ad 424 Pfam PF13186 Iron-sulfur cluster-binding domain 311 372 1.4E-6 T 12-10-2018 IPR023885 4Fe4S-binding SPASM domain Vc3S01_A1010 a3e0db77d01bc04177e76107e0cc84ad 424 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 311 400 1.7E-18 T 12-10-2018 IPR023885 4Fe4S-binding SPASM domain Vc3S01_A1010 a3e0db77d01bc04177e76107e0cc84ad 424 TIGRFAM TIGR03942 sulfatase_rSAM: anaerobic sulfatase maturase 29 413 3.8E-146 T 12-10-2018 Vc3S01_A1010 a3e0db77d01bc04177e76107e0cc84ad 424 SUPERFAMILY SSF102114 37 381 3.01E-40 T 12-10-2018 Vc3S01_A0680 f14141fa23a6dfa4d9371fffd4f5edb5 71 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 39 70 1.4E-9 T 12-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 Vc3S01_A0680 f14141fa23a6dfa4d9371fffd4f5edb5 71 Gene3D G3DSA:1.20.120.910 2 71 2.4E-13 T 12-10-2018 Vc3S01_A0680 f14141fa23a6dfa4d9371fffd4f5edb5 71 ProSitePatterns PS01030 RNA polymerases M / 15 Kd subunits signature. 40 65 - T 12-10-2018 IPR019761 DNA-directed RNA polymerase M, 15kDa subunit, conserved site Vc3S01_A0680 f14141fa23a6dfa4d9371fffd4f5edb5 71 TIGRFAM TIGR02419 C4_traR_proteo: phage/conjugal plasmid C-4 type zinc finger protein, TraR family 3 70 1.1E-17 T 12-10-2018 IPR012783 Zinc finger, C4 DksA/TraR-type Vc3S01_A0680 f14141fa23a6dfa4d9371fffd4f5edb5 71 SUPERFAMILY SSF57716 40 70 1.71E-5 T 12-10-2018 Vc3S01_A1502 3f67e12c4329845bde5136880f5dd9da 606 Gene3D G3DSA:3.20.20.450 343 606 2.1E-75 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_A1502 3f67e12c4329845bde5136880f5dd9da 606 SMART SM00267 166 330 2.7E-26 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A1502 3f67e12c4329845bde5136880f5dd9da 606 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 177 329 3.7E-26 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A1502 3f67e12c4329845bde5136880f5dd9da 606 Pfam PF00563 EAL domain 351 588 2.1E-61 T 12-10-2018 IPR001633 EAL domain Vc3S01_A1502 3f67e12c4329845bde5136880f5dd9da 606 SMART SM00052 345 593 3.6E-75 T 12-10-2018 IPR001633 EAL domain Vc3S01_A1502 3f67e12c4329845bde5136880f5dd9da 606 SUPERFAMILY SSF141868 359 600 3.66E-71 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_A1502 3f67e12c4329845bde5136880f5dd9da 606 Gene3D G3DSA:3.30.70.270 171 342 1.3E-35 T 12-10-2018 Vc3S01_A1502 3f67e12c4329845bde5136880f5dd9da 606 SUPERFAMILY SSF55073 182 332 1.26E-31 T 12-10-2018 IPR029787 Nucleotide cyclase Vc3S01_A1502 3f67e12c4329845bde5136880f5dd9da 606 SUPERFAMILY SSF55781 30 141 8.83E-7 T 12-10-2018 Vc3S01_A1502 3f67e12c4329845bde5136880f5dd9da 606 Pfam PF00990 Diguanylate cyclase, GGDEF domain 178 324 1.1E-27 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_0247 554bedf19fe21b55d12b5badb4804177 375 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 3 311 50.001 T 12-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 Vc3S01_0247 554bedf19fe21b55d12b5badb4804177 375 Pfam PF08331 Domain of unknown function (DUF1730) 58 136 2.6E-22 T 12-10-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 Vc3S01_0247 554bedf19fe21b55d12b5badb4804177 375 Pfam PF13484 4Fe-4S double cluster binding domain 188 252 6.4E-19 T 12-10-2018 Vc3S01_0247 554bedf19fe21b55d12b5badb4804177 375 SUPERFAMILY SSF54862 165 281 7.95E-19 T 12-10-2018 Vc3S01_0247 554bedf19fe21b55d12b5badb4804177 375 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 189 200 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Vc3S01_0247 554bedf19fe21b55d12b5badb4804177 375 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 10 344 5.5E-150 T 12-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 Vc3S01_A1149 3064e03a425743bf297269bf46d01932 446 Gene3D G3DSA:1.20.1250.20 19 223 2.3E-52 T 12-10-2018 Vc3S01_A1149 3064e03a425743bf297269bf46d01932 446 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 413 3.8E-141 T 12-10-2018 Vc3S01_A1149 3064e03a425743bf297269bf46d01932 446 Pfam PF07690 Major Facilitator Superfamily 36 396 2.5E-51 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Vc3S01_A1149 3064e03a425743bf297269bf46d01932 446 SUPERFAMILY SSF103473 14 431 3.53E-81 T 12-10-2018 IPR036259 MFS transporter superfamily Vc3S01_A1149 3064e03a425743bf297269bf46d01932 446 PIRSF PIRSF002808 7 443 9.7E-142 T 12-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 Vc3S01_A1149 3064e03a425743bf297269bf46d01932 446 ProSitePatterns PS00942 glpT family of transporters signature. 151 167 - T 12-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 Vc3S01_A1149 3064e03a425743bf297269bf46d01932 446 Gene3D G3DSA:1.20.1250.20 238 438 1.8E-44 T 12-10-2018 Vc3S01_2869 18f0d74e5d74ef356201ee7643742b17 159 Pfam PF00186 Dihydrofolate reductase 3 159 2.4E-62 T 12-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 Vc3S01_2869 18f0d74e5d74ef356201ee7643742b17 159 PRINTS PR00070 Dihydrofolate reductase signature 28 36 2.9E-14 T 12-10-2018 Vc3S01_2869 18f0d74e5d74ef356201ee7643742b17 159 PRINTS PR00070 Dihydrofolate reductase signature 92 106 2.9E-14 T 12-10-2018 Vc3S01_2869 18f0d74e5d74ef356201ee7643742b17 159 PRINTS PR00070 Dihydrofolate reductase signature 14 24 2.9E-14 T 12-10-2018 Vc3S01_2869 18f0d74e5d74ef356201ee7643742b17 159 PRINTS PR00070 Dihydrofolate reductase signature 41 52 2.9E-14 T 12-10-2018 Vc3S01_2869 18f0d74e5d74ef356201ee7643742b17 159 SUPERFAMILY SSF53597 1 159 5.63E-58 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Vc3S01_2869 18f0d74e5d74ef356201ee7643742b17 159 Gene3D G3DSA:3.40.430.10 1 159 7.1E-61 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Vc3S01_2869 18f0d74e5d74ef356201ee7643742b17 159 PIRSF PIRSF000194 1 159 1.9E-63 T 12-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 Vc3S01_0564 c1def913aa619f1a2304a1c1c81aa76f 138 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 32 2.6E-10 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Vc3S01_0564 c1def913aa619f1a2304a1c1c81aa76f 138 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Vc3S01_0564 c1def913aa619f1a2304a1c1c81aa76f 138 Pfam PF00114 Pilin (bacterial filament) 40 135 1.7E-5 T 12-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 Vc3S01_0564 c1def913aa619f1a2304a1c1c81aa76f 138 SUPERFAMILY SSF54523 12 86 2.83E-22 T 12-10-2018 Vc3S01_0564 c1def913aa619f1a2304a1c1c81aa76f 138 Gene3D G3DSA:3.30.700.10 12 136 1.6E-25 T 12-10-2018 Vc3S01_0564 c1def913aa619f1a2304a1c1c81aa76f 138 Pfam PF07963 Prokaryotic N-terminal methylation motif 7 31 3.3E-11 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Vc3S01_1115 7117fd09861061475eca7db80e153ec4 480 SUPERFAMILY SSF52935 329 478 2.09E-36 T 12-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Vc3S01_1115 7117fd09861061475eca7db80e153ec4 480 Pfam PF00224 Pyruvate kinase, barrel domain 6 345 1.1E-129 T 12-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Vc3S01_1115 7117fd09861061475eca7db80e153ec4 480 ProSitePatterns PS00110 Pyruvate kinase active site signature. 218 230 - T 12-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Vc3S01_1115 7117fd09861061475eca7db80e153ec4 480 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 6 478 3.7E-166 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Vc3S01_1115 7117fd09861061475eca7db80e153ec4 480 Gene3D G3DSA:3.20.20.60 6 341 3.0E-152 T 12-10-2018 Vc3S01_1115 7117fd09861061475eca7db80e153ec4 480 SUPERFAMILY SSF51621 5 344 1.02E-83 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Vc3S01_1115 7117fd09861061475eca7db80e153ec4 480 Gene3D G3DSA:2.40.33.10 74 172 3.0E-152 T 12-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Vc3S01_1115 7117fd09861061475eca7db80e153ec4 480 SUPERFAMILY SSF50800 74 169 6.98E-27 T 12-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily Vc3S01_1115 7117fd09861061475eca7db80e153ec4 480 Pfam PF02887 Pyruvate kinase, alpha/beta domain 363 478 6.3E-28 T 12-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Vc3S01_1115 7117fd09861061475eca7db80e153ec4 480 Gene3D G3DSA:3.40.1380.20 342 476 3.0E-152 T 12-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Vc3S01_1115 7117fd09861061475eca7db80e153ec4 480 PRINTS PR01050 Pyruvate kinase family signature 63 79 2.8E-52 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Vc3S01_1115 7117fd09861061475eca7db80e153ec4 480 PRINTS PR01050 Pyruvate kinase family signature 300 318 2.8E-52 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Vc3S01_1115 7117fd09861061475eca7db80e153ec4 480 PRINTS PR01050 Pyruvate kinase family signature 275 299 2.8E-52 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Vc3S01_1115 7117fd09861061475eca7db80e153ec4 480 PRINTS PR01050 Pyruvate kinase family signature 190 204 2.8E-52 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Vc3S01_1115 7117fd09861061475eca7db80e153ec4 480 PRINTS PR01050 Pyruvate kinase family signature 250 274 2.8E-52 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Vc3S01_1115 7117fd09861061475eca7db80e153ec4 480 PRINTS PR01050 Pyruvate kinase family signature 223 249 2.8E-52 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Vc3S01_1115 7117fd09861061475eca7db80e153ec4 480 PRINTS PR01050 Pyruvate kinase family signature 319 335 2.8E-52 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Vc3S01_0267 ac0908bc3c2591972194e91dda610e43 195 PRINTS PR00097 Anthranilate synthase component II signature 47 56 3.7E-36 T 12-10-2018 Vc3S01_0267 ac0908bc3c2591972194e91dda610e43 195 PRINTS PR00097 Anthranilate synthase component II signature 74 85 3.7E-36 T 12-10-2018 Vc3S01_0267 ac0908bc3c2591972194e91dda610e43 195 PRINTS PR00097 Anthranilate synthase component II signature 169 182 3.7E-36 T 12-10-2018 Vc3S01_0267 ac0908bc3c2591972194e91dda610e43 195 PRINTS PR00097 Anthranilate synthase component II signature 99 107 3.7E-36 T 12-10-2018 Vc3S01_0267 ac0908bc3c2591972194e91dda610e43 195 PRINTS PR00097 Anthranilate synthase component II signature 2 16 3.7E-36 T 12-10-2018 Vc3S01_0267 ac0908bc3c2591972194e91dda610e43 195 PRINTS PR00097 Anthranilate synthase component II signature 119 131 3.7E-36 T 12-10-2018 Vc3S01_0267 ac0908bc3c2591972194e91dda610e43 195 SUPERFAMILY SSF52317 1 191 1.39E-53 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Vc3S01_0267 ac0908bc3c2591972194e91dda610e43 195 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 5.4E-5 T 12-10-2018 Vc3S01_0267 ac0908bc3c2591972194e91dda610e43 195 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 5.4E-5 T 12-10-2018 Vc3S01_0267 ac0908bc3c2591972194e91dda610e43 195 Pfam PF00117 Glutamine amidotransferase class-I 4 191 1.5E-54 T 12-10-2018 IPR017926 Glutamine amidotransferase Vc3S01_0267 ac0908bc3c2591972194e91dda610e43 195 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 4.4E-13 T 12-10-2018 Vc3S01_0267 ac0908bc3c2591972194e91dda610e43 195 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 4.4E-13 T 12-10-2018 Vc3S01_0267 ac0908bc3c2591972194e91dda610e43 195 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 4.4E-13 T 12-10-2018 Vc3S01_0267 ac0908bc3c2591972194e91dda610e43 195 Gene3D G3DSA:3.40.50.880 1 193 4.1E-61 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Vc3S01_0267 ac0908bc3c2591972194e91dda610e43 195 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 192 3.6E-86 T 12-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Vc3S01_2647 b94fb7376bbc82844226b347d4bc02c0 109 PRINTS PR01853 Bacterial YajC preprotein translocase signature 57 75 9.6E-16 T 12-10-2018 IPR003849 Preprotein translocase YajC Vc3S01_2647 b94fb7376bbc82844226b347d4bc02c0 109 PRINTS PR01853 Bacterial YajC preprotein translocase signature 19 39 9.6E-16 T 12-10-2018 IPR003849 Preprotein translocase YajC Vc3S01_2647 b94fb7376bbc82844226b347d4bc02c0 109 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 19 101 3.3E-30 T 12-10-2018 IPR003849 Preprotein translocase YajC Vc3S01_2647 b94fb7376bbc82844226b347d4bc02c0 109 SMART SM01323 17 101 2.3E-38 T 12-10-2018 IPR003849 Preprotein translocase YajC Vc3S01_2647 b94fb7376bbc82844226b347d4bc02c0 109 Pfam PF02699 Preprotein translocase subunit 21 98 6.0E-26 T 12-10-2018 IPR003849 Preprotein translocase YajC Vc3S01_A0982 894c24a08e2dd4e5aaa35d81abb3c924 443 Gene3D G3DSA:1.20.1250.20 13 435 1.7E-19 T 12-10-2018 Vc3S01_A0982 894c24a08e2dd4e5aaa35d81abb3c924 443 SUPERFAMILY SSF103473 14 436 2.49E-29 T 12-10-2018 IPR036259 MFS transporter superfamily Vc3S01_A0982 894c24a08e2dd4e5aaa35d81abb3c924 443 Pfam PF07690 Major Facilitator Superfamily 21 384 1.6E-9 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Vc3S01_A0754 0695f03aabc7b173d2acd48837d6e582 207 PRINTS PR01021 OMPA domain signature 103 125 1.1E-8 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Vc3S01_A0754 0695f03aabc7b173d2acd48837d6e582 207 PRINTS PR01021 OMPA domain signature 148 164 1.1E-8 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Vc3S01_A0754 0695f03aabc7b173d2acd48837d6e582 207 PRINTS PR01021 OMPA domain signature 133 148 1.1E-8 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Vc3S01_A0754 0695f03aabc7b173d2acd48837d6e582 207 Pfam PF00691 OmpA family 103 197 7.2E-17 T 12-10-2018 IPR006665 OmpA-like domain Vc3S01_A0754 0695f03aabc7b173d2acd48837d6e582 207 Gene3D G3DSA:3.30.1330.60 67 206 7.1E-31 T 12-10-2018 IPR036737 OmpA-like domain superfamily Vc3S01_A0754 0695f03aabc7b173d2acd48837d6e582 207 SUPERFAMILY SSF103088 90 203 6.8E-30 T 12-10-2018 IPR036737 OmpA-like domain superfamily Vc3S01_1491 6ae5993ac37674f67657cd837d2ce6f9 645 SUPERFAMILY SSF53649 279 606 1.06E-68 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Vc3S01_1491 6ae5993ac37674f67657cd837d2ce6f9 645 Pfam PF00884 Sulfatase 281 551 2.0E-48 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 Vc3S01_1491 6ae5993ac37674f67657cd837d2ce6f9 645 PIRSF PIRSF005091 10 645 1.7E-100 T 12-10-2018 IPR012160 Lipoteichoic acid synthase-like Vc3S01_1491 6ae5993ac37674f67657cd837d2ce6f9 645 Gene3D G3DSA:3.30.1120.80 244 640 1.8E-199 T 12-10-2018 Vc3S01_1491 6ae5993ac37674f67657cd837d2ce6f9 645 Gene3D G3DSA:3.40.720.10 272 568 1.8E-199 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Vc3S01_0753 66f444175508eb25f9d1b4b8fdf758fb 334 SUPERFAMILY SSF143631 24 332 2.88E-101 T 12-10-2018 IPR003374 ApbE-like superfamily Vc3S01_0753 66f444175508eb25f9d1b4b8fdf758fb 334 Pfam PF02424 ApbE family 31 310 3.3E-86 T 12-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 Vc3S01_0753 66f444175508eb25f9d1b4b8fdf758fb 334 PIRSF PIRSF006268 1 334 8.7E-94 T 12-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 Vc3S01_0753 66f444175508eb25f9d1b4b8fdf758fb 334 Gene3D G3DSA:3.10.520.20 16 334 4.6E-113 T 12-10-2018 Vc3S01_2862 07a6bbde18dd7e8eddb393d5414adaea 284 PRINTS PR00625 DnaJ domain signature 238 253 6.0E-9 T 12-10-2018 IPR001623 DnaJ domain Vc3S01_2862 07a6bbde18dd7e8eddb393d5414adaea 284 PRINTS PR00625 DnaJ domain signature 262 282 6.0E-9 T 12-10-2018 IPR001623 DnaJ domain Vc3S01_2862 07a6bbde18dd7e8eddb393d5414adaea 284 PRINTS PR00625 DnaJ domain signature 220 238 6.0E-9 T 12-10-2018 IPR001623 DnaJ domain Vc3S01_2862 07a6bbde18dd7e8eddb393d5414adaea 284 Pfam PF05099 Tellurite resistance protein TerB 44 177 1.2E-17 T 12-10-2018 IPR007791 Co-chaperone DjlA, N-terminal Vc3S01_2862 07a6bbde18dd7e8eddb393d5414adaea 284 SUPERFAMILY SSF46565 215 278 7.78E-17 T 12-10-2018 IPR036869 Chaperone J-domain superfamily Vc3S01_2862 07a6bbde18dd7e8eddb393d5414adaea 284 Gene3D G3DSA:1.10.3680.10 45 191 1.1E-26 T 12-10-2018 IPR029024 TerB-like Vc3S01_2862 07a6bbde18dd7e8eddb393d5414adaea 284 SUPERFAMILY SSF158682 5 230 7.85E-32 T 12-10-2018 IPR029024 TerB-like Vc3S01_2862 07a6bbde18dd7e8eddb393d5414adaea 284 Pfam PF00226 DnaJ domain 218 278 6.6E-12 T 12-10-2018 IPR001623 DnaJ domain Vc3S01_2862 07a6bbde18dd7e8eddb393d5414adaea 284 SMART SM00271 217 282 9.4E-18 T 12-10-2018 IPR001623 DnaJ domain Vc3S01_2862 07a6bbde18dd7e8eddb393d5414adaea 284 Hamap MF_01153 Co-chaperone protein DjlA [djlA]. 3 283 39.42 T 12-10-2018 IPR023749 Co-chaperone DjlA GO:0051087 Vc3S01_2862 07a6bbde18dd7e8eddb393d5414adaea 284 Gene3D G3DSA:1.10.287.110 194 282 1.7E-16 T 12-10-2018 IPR036869 Chaperone J-domain superfamily Vc3S01_0825 63a452188a55ae6d9a69c59d2120eed7 156 Gene3D G3DSA:3.40.30.10 3 155 2.2E-45 T 12-10-2018 Vc3S01_0825 63a452188a55ae6d9a69c59d2120eed7 156 PIRSF PIRSF000239 1 145 2.1E-17 T 12-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Vc3S01_0825 63a452188a55ae6d9a69c59d2120eed7 156 Pfam PF00578 AhpC/TSA family 7 134 3.3E-35 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Vc3S01_0825 63a452188a55ae6d9a69c59d2120eed7 156 SUPERFAMILY SSF52833 4 154 4.02E-47 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Vc3S01_0644 9e4726bab181feabb908bde48fb62cb9 132 PIRSF PIRSF029225 2 132 3.3E-44 T 12-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Vc3S01_0644 9e4726bab181feabb908bde48fb62cb9 132 Gene3D G3DSA:3.40.50.10220 35 132 1.5E-30 T 12-10-2018 IPR036654 DNA polymerase III, psi subunit superfamily GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Vc3S01_0644 9e4726bab181feabb908bde48fb62cb9 132 ProDom PD032475 DNA POLYMERASE PSI SUBUNIT III TRANSFERASE NUCLEOTIDYLTRANSFERASE III 3D-STRUCTURE DNA-DIRECTED 56 128 3.0E-6 T 12-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Vc3S01_0644 9e4726bab181feabb908bde48fb62cb9 132 SUPERFAMILY SSF102220 33 131 1.01E-28 T 12-10-2018 IPR036654 DNA polymerase III, psi subunit superfamily GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Vc3S01_0644 9e4726bab181feabb908bde48fb62cb9 132 Pfam PF03603 DNA polymerase III psi subunit 4 130 3.9E-38 T 12-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Vc3S01_2500 a69c8f9cd08d1750eea442c12a8b3d3f 283 SUPERFAMILY SSF51569 2 278 3.57E-104 T 12-10-2018 Vc3S01_2500 a69c8f9cd08d1750eea442c12a8b3d3f 283 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 18 275 2.8E-116 T 12-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Vc3S01_2500 a69c8f9cd08d1750eea442c12a8b3d3f 283 Gene3D G3DSA:3.20.20.70 1 283 1.1E-101 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_2500 a69c8f9cd08d1750eea442c12a8b3d3f 283 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 277 48.24 T 12-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Vc3S01_2500 a69c8f9cd08d1750eea442c12a8b3d3f 283 Pfam PF00793 DAHP synthetase I family 10 275 4.3E-69 T 12-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Vc3S01_A1410 6a0dc5278f9e1a149b3f960cdd050b34 394 SUPERFAMILY SSF52540 42 273 1.77E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A1410 6a0dc5278f9e1a149b3f960cdd050b34 394 SMART SM00382 52 253 1.0E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_A1410 6a0dc5278f9e1a149b3f960cdd050b34 394 TIGRFAM TIGR03415 ABC_choXWV_ATP: choline ABC transporter, ATP-binding protein 4 386 3.4E-182 T 12-10-2018 IPR022473 ABC transporter, Choline, ATP-binding subunit GO:0015220|GO:0015871|GO:0055052 Vc3S01_A1410 6a0dc5278f9e1a149b3f960cdd050b34 394 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_A1410 6a0dc5278f9e1a149b3f960cdd050b34 394 Gene3D G3DSA:3.40.50.300 8 267 4.3E-63 T 12-10-2018 Vc3S01_A1410 6a0dc5278f9e1a149b3f960cdd050b34 394 Gene3D G3DSA:3.10.580.10 268 388 1.2E-5 T 12-10-2018 Vc3S01_A1410 6a0dc5278f9e1a149b3f960cdd050b34 394 Pfam PF00005 ABC transporter 44 195 2.0E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_A1410 6a0dc5278f9e1a149b3f960cdd050b34 394 SUPERFAMILY SSF54631 328 387 5.9E-6 T 12-10-2018 Vc3S01_0306 cdec01b0b4cdd5f1127fd8fd206ab366 334 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 149 165 - T 12-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Vc3S01_0306 cdec01b0b4cdd5f1127fd8fd206ab366 334 SUPERFAMILY SSF55347 154 308 1.23E-50 T 12-10-2018 Vc3S01_0306 cdec01b0b4cdd5f1127fd8fd206ab366 334 Gene3D G3DSA:3.30.360.10 153 312 7.0E-121 T 12-10-2018 Vc3S01_0306 cdec01b0b4cdd5f1127fd8fd206ab366 334 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 164 311 1.4E-15 T 12-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Vc3S01_0306 cdec01b0b4cdd5f1127fd8fd206ab366 334 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 145 1.8E-31 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Vc3S01_0306 cdec01b0b4cdd5f1127fd8fd206ab366 334 SMART SM00859 3 146 1.2E-42 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Vc3S01_0306 cdec01b0b4cdd5f1127fd8fd206ab366 334 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 334 37.846 T 12-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Vc3S01_0306 cdec01b0b4cdd5f1127fd8fd206ab366 334 SUPERFAMILY SSF51735 1 173 3.57E-41 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_0306 cdec01b0b4cdd5f1127fd8fd206ab366 334 Gene3D G3DSA:3.40.50.720 6 329 7.0E-121 T 12-10-2018 Vc3S01_0306 cdec01b0b4cdd5f1127fd8fd206ab366 334 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 333 5.1E-119 T 12-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Vc3S01_2266 e8751219923be202912b978d29baae87 235 SUPERFAMILY SSF52540 4 228 1.04E-69 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2266 e8751219923be202912b978d29baae87 235 Gene3D G3DSA:3.40.50.300 1 235 2.1E-66 T 12-10-2018 Vc3S01_2266 e8751219923be202912b978d29baae87 235 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_2266 e8751219923be202912b978d29baae87 235 Pfam PF00005 ABC transporter 24 172 8.7E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_2266 e8751219923be202912b978d29baae87 235 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 4 223 3.6E-110 T 12-10-2018 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0016020|GO:0044873 Vc3S01_2266 e8751219923be202912b978d29baae87 235 SMART SM00382 33 221 1.5E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_0976 b494ae6c3f61f239f78c31fbddf17f79 900 Pfam PF00171 Aldehyde dehydrogenase family 5 400 1.6E-23 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Vc3S01_0976 b494ae6c3f61f239f78c31fbddf17f79 900 SUPERFAMILY SSF53720 6 454 2.62E-82 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Vc3S01_0976 b494ae6c3f61f239f78c31fbddf17f79 900 Gene3D G3DSA:1.20.1090.10 643 864 1.7E-60 T 12-10-2018 Vc3S01_0976 b494ae6c3f61f239f78c31fbddf17f79 900 Gene3D G3DSA:3.40.309.10 218 405 8.6E-177 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Vc3S01_0976 b494ae6c3f61f239f78c31fbddf17f79 900 Pfam PF00465 Iron-containing alcohol dehydrogenase 458 848 5.5E-114 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 Vc3S01_0976 b494ae6c3f61f239f78c31fbddf17f79 900 Gene3D G3DSA:3.40.605.10 12 446 8.6E-177 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Vc3S01_0976 b494ae6c3f61f239f78c31fbddf17f79 900 PIRSF PIRSF000111 1 865 0.0 T 12-10-2018 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 Vc3S01_0976 b494ae6c3f61f239f78c31fbddf17f79 900 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 719 739 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 Vc3S01_0976 b494ae6c3f61f239f78c31fbddf17f79 900 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 631 659 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 Vc3S01_0976 b494ae6c3f61f239f78c31fbddf17f79 900 SUPERFAMILY SSF56796 452 863 5.23E-116 T 12-10-2018 Vc3S01_0976 b494ae6c3f61f239f78c31fbddf17f79 900 Gene3D G3DSA:3.40.50.1970 451 642 1.2E-58 T 12-10-2018 Vc3S01_1598 a62ed49654985ac7144072a0810fa59e 269 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 12-10-2018 Vc3S01_1598 a62ed49654985ac7144072a0810fa59e 269 Gene3D G3DSA:3.30.1240.10 86 191 3.0E-79 T 12-10-2018 Vc3S01_1598 a62ed49654985ac7144072a0810fa59e 269 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 262 2.3E-66 T 12-10-2018 Vc3S01_1598 a62ed49654985ac7144072a0810fa59e 269 SUPERFAMILY SSF56784 1 267 5.69E-76 T 12-10-2018 IPR036412 HAD-like superfamily Vc3S01_1598 a62ed49654985ac7144072a0810fa59e 269 ProSitePatterns PS01229 Hypothetical cof family signature 2. 216 238 - T 12-10-2018 Vc3S01_1598 a62ed49654985ac7144072a0810fa59e 269 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 262 4.2E-62 T 12-10-2018 IPR000150 Cof family GO:0016787 Vc3S01_1598 a62ed49654985ac7144072a0810fa59e 269 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 235 3.0E-28 T 12-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 Vc3S01_1598 a62ed49654985ac7144072a0810fa59e 269 Gene3D G3DSA:3.40.50.1000 3 263 3.0E-79 T 12-10-2018 IPR023214 HAD superfamily Vc3S01_2391 d596dac176eb6ffcedf636f8e9b73165 282 SUPERFAMILY SSF53807 6 280 9.81E-78 T 12-10-2018 Vc3S01_2391 d596dac176eb6ffcedf636f8e9b73165 282 Gene3D G3DSA:3.40.50.1980 169 282 2.3E-40 T 12-10-2018 Vc3S01_2391 d596dac176eb6ffcedf636f8e9b73165 282 Gene3D G3DSA:3.40.50.1980 10 168 2.5E-49 T 12-10-2018 Vc3S01_2391 d596dac176eb6ffcedf636f8e9b73165 282 PRINTS PR00691 Adhesin B signature 33 51 5.0E-5 T 12-10-2018 IPR006129 Adhesin B GO:0007155 Vc3S01_2391 d596dac176eb6ffcedf636f8e9b73165 282 PRINTS PR00691 Adhesin B signature 112 131 5.0E-5 T 12-10-2018 IPR006129 Adhesin B GO:0007155 Vc3S01_2391 d596dac176eb6ffcedf636f8e9b73165 282 PRINTS PR00691 Adhesin B signature 52 71 5.0E-5 T 12-10-2018 IPR006129 Adhesin B GO:0007155 Vc3S01_2391 d596dac176eb6ffcedf636f8e9b73165 282 PRINTS PR00690 Adhesin family signature 39 52 7.8E-9 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Vc3S01_2391 d596dac176eb6ffcedf636f8e9b73165 282 PRINTS PR00690 Adhesin family signature 52 69 7.8E-9 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Vc3S01_2391 d596dac176eb6ffcedf636f8e9b73165 282 PRINTS PR00690 Adhesin family signature 221 239 7.8E-9 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Vc3S01_2391 d596dac176eb6ffcedf636f8e9b73165 282 PRINTS PR00690 Adhesin family signature 168 189 7.8E-9 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Vc3S01_2391 d596dac176eb6ffcedf636f8e9b73165 282 Pfam PF01297 Zinc-uptake complex component A periplasmic 11 278 1.7E-60 T 12-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 Vc3S01_A0506 c152b3152cc3d09523ef297cf9d4eb38 279 SUPERFAMILY SSF103481 165 266 7.59E-6 T 12-10-2018 Vc3S01_A0506 c152b3152cc3d09523ef297cf9d4eb38 279 SUPERFAMILY SSF103481 17 117 1.22E-13 T 12-10-2018 Vc3S01_A0506 c152b3152cc3d09523ef297cf9d4eb38 279 Pfam PF00892 EamA-like transporter family 2 115 2.0E-18 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Vc3S01_A0506 c152b3152cc3d09523ef297cf9d4eb38 279 Pfam PF00892 EamA-like transporter family 128 262 4.4E-16 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Vc3S01_A1411 5849fb88457917610c5f9ea5e979a127 280 SUPERFAMILY SSF161098 88 272 5.76E-40 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_A1411 5849fb88457917610c5f9ea5e979a127 280 TIGRFAM TIGR03416 ABC_choXWV_perm: choline ABC transporter, permease protein 6 272 3.6E-127 T 12-10-2018 IPR017784 ABC transporter, choline, permease protein Vc3S01_A1411 5849fb88457917610c5f9ea5e979a127 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 267 2.2E-27 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Vc3S01_A1411 5849fb88457917610c5f9ea5e979a127 280 Gene3D G3DSA:1.10.3720.10 86 274 2.5E-35 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_A0192 dcff711371183f4148887c959a1e2ab1 222 Pfam PF03070 TENA/THI-4/PQQC family 9 217 3.5E-45 T 12-10-2018 IPR004305 Thiaminase-2/PQQC Vc3S01_A0192 dcff711371183f4148887c959a1e2ab1 222 SUPERFAMILY SSF48613 3 216 3.89E-68 T 12-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 Vc3S01_A0192 dcff711371183f4148887c959a1e2ab1 222 Gene3D G3DSA:1.20.910.10 2 221 1.5E-63 T 12-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 Vc3S01_A0192 dcff711371183f4148887c959a1e2ab1 222 TIGRFAM TIGR04306 salvage_TenA: thiaminase II 12 216 6.4E-41 T 12-10-2018 IPR027574 Thiaminase II GO:0006772|GO:0050334 KEGG: 00730+3.5.99.2|MetaCyc: PWY-6899|MetaCyc: PWY-7356 Vc3S01_A1547 81af8f1ae245d19e83b84afad7d7a91c 1412 Pfam PF12838 4Fe-4S dicluster domain 634 703 3.1E-6 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Vc3S01_A1547 81af8f1ae245d19e83b84afad7d7a91c 1412 SUPERFAMILY SSF51971 190 430 3.59E-61 T 12-10-2018 Vc3S01_A1547 81af8f1ae245d19e83b84afad7d7a91c 1412 SUPERFAMILY SSF53706 714 1250 3.4E-203 T 12-10-2018 Vc3S01_A1547 81af8f1ae245d19e83b84afad7d7a91c 1412 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 719 771 3.1E-15 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Vc3S01_A1547 81af8f1ae245d19e83b84afad7d7a91c 1412 PRINTS PR00419 Adrenodoxin reductase family signature 323 337 1.4E-14 T 12-10-2018 Vc3S01_A1547 81af8f1ae245d19e83b84afad7d7a91c 1412 PRINTS PR00419 Adrenodoxin reductase family signature 192 214 1.4E-14 T 12-10-2018 Vc3S01_A1547 81af8f1ae245d19e83b84afad7d7a91c 1412 PRINTS PR00419 Adrenodoxin reductase family signature 215 228 1.4E-14 T 12-10-2018 Vc3S01_A1547 81af8f1ae245d19e83b84afad7d7a91c 1412 Pfam PF01568 Molydopterin dinucleotide binding domain 1285 1389 1.3E-29 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Vc3S01_A1547 81af8f1ae245d19e83b84afad7d7a91c 1412 SMART SM00926 718 773 2.2E-16 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Vc3S01_A1547 81af8f1ae245d19e83b84afad7d7a91c 1412 Gene3D G3DSA:2.20.25.90 718 773 1.5E-18 T 12-10-2018 Vc3S01_A1547 81af8f1ae245d19e83b84afad7d7a91c 1412 Gene3D G3DSA:3.50.50.60 190 314 2.6E-33 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_A1547 81af8f1ae245d19e83b84afad7d7a91c 1412 Gene3D G3DSA:3.50.50.60 318 524 2.9E-27 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_A1547 81af8f1ae245d19e83b84afad7d7a91c 1412 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 689 700 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Vc3S01_A1547 81af8f1ae245d19e83b84afad7d7a91c 1412 Gene3D G3DSA:1.10.1060.10 58 189 2.7E-25 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Vc3S01_A1547 81af8f1ae245d19e83b84afad7d7a91c 1412 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 2 75 4.8E-10 T 12-10-2018 Vc3S01_A1547 81af8f1ae245d19e83b84afad7d7a91c 1412 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 723 740 - T 12-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 Vc3S01_A1547 81af8f1ae245d19e83b84afad7d7a91c 1412 Pfam PF00384 Molybdopterin oxidoreductase 776 1202 8.4E-88 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Vc3S01_A1547 81af8f1ae245d19e83b84afad7d7a91c 1412 SUPERFAMILY SSF54862 567 708 3.77E-20 T 12-10-2018 Vc3S01_A1547 81af8f1ae245d19e83b84afad7d7a91c 1412 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 1148 1165 - T 12-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 Vc3S01_A1547 81af8f1ae245d19e83b84afad7d7a91c 1412 SUPERFAMILY SSF54292 1 98 2.91E-25 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Vc3S01_A1547 81af8f1ae245d19e83b84afad7d7a91c 1412 Gene3D G3DSA:2.40.40.20 1275 1395 2.0E-40 T 12-10-2018 Vc3S01_A1547 81af8f1ae245d19e83b84afad7d7a91c 1412 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 96 174 2.5E-18 T 12-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 Vc3S01_A1547 81af8f1ae245d19e83b84afad7d7a91c 1412 Gene3D G3DSA:3.30.70.20 614 707 4.5E-18 T 12-10-2018 Vc3S01_A1547 81af8f1ae245d19e83b84afad7d7a91c 1412 Gene3D G3DSA:3.40.50.740 781 1243 3.0E-178 T 12-10-2018 Vc3S01_A1547 81af8f1ae245d19e83b84afad7d7a91c 1412 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 723 1393 1.1E-246 T 12-10-2018 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.17.1.9|KEGG: 00680+1.17.1.9|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696|MetaCyc: PWY-7985 Vc3S01_A1547 81af8f1ae245d19e83b84afad7d7a91c 1412 Gene3D G3DSA:3.40.228.10 854 1055 3.0E-178 T 12-10-2018 Vc3S01_A1547 81af8f1ae245d19e83b84afad7d7a91c 1412 SUPERFAMILY SSF46548 89 200 1.41E-16 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Vc3S01_A1547 81af8f1ae245d19e83b84afad7d7a91c 1412 SUPERFAMILY SSF50692 1253 1394 5.65E-40 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Vc3S01_A1547 81af8f1ae245d19e83b84afad7d7a91c 1412 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 192 488 8.6E-32 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Vc3S01_A1973 d28e48dfe04ea3fb4fa1b222acffb815 140 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 4 135 4.2E-52 T 12-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 Vc3S01_A1973 d28e48dfe04ea3fb4fa1b222acffb815 140 SUPERFAMILY SSF82784 1 135 5.1E-42 T 12-10-2018 IPR036102 OsmC/Ohr superfamily Vc3S01_A1973 d28e48dfe04ea3fb4fa1b222acffb815 140 Gene3D G3DSA:3.30.300.20 44 140 4.8E-32 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta Vc3S01_A1973 d28e48dfe04ea3fb4fa1b222acffb815 140 Pfam PF02566 OsmC-like protein 38 133 8.6E-18 T 12-10-2018 IPR003718 OsmC/Ohr family Vc3S01_A1973 d28e48dfe04ea3fb4fa1b222acffb815 140 Gene3D G3DSA:2.20.25.10 1 43 1.6E-21 T 12-10-2018 Vc3S01_A1489 98a1a88932b730b14798019278f315c3 210 Pfam PF01810 LysE type translocator 16 205 1.6E-28 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Vc3S01_A1489 98a1a88932b730b14798019278f315c3 210 PIRSF PIRSF006324 1 209 3.9E-57 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Vc3S01_A1532 0ba82ac2edd0f09f50fae0e7d7d44ffd 817 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 166 605 2.2E-113 T 12-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 Vc3S01_A1532 0ba82ac2edd0f09f50fae0e7d7d44ffd 817 SUPERFAMILY SSF51445 166 621 6.43E-97 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily Vc3S01_A1532 0ba82ac2edd0f09f50fae0e7d7d44ffd 817 PRINTS PR00738 Glycosyl hydrolase family 20 signature 291 309 3.9E-41 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 Vc3S01_A1532 0ba82ac2edd0f09f50fae0e7d7d44ffd 817 PRINTS PR00738 Glycosyl hydrolase family 20 signature 189 210 3.9E-41 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 Vc3S01_A1532 0ba82ac2edd0f09f50fae0e7d7d44ffd 817 PRINTS PR00738 Glycosyl hydrolase family 20 signature 160 177 3.9E-41 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 Vc3S01_A1532 0ba82ac2edd0f09f50fae0e7d7d44ffd 817 PRINTS PR00738 Glycosyl hydrolase family 20 signature 241 258 3.9E-41 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 Vc3S01_A1532 0ba82ac2edd0f09f50fae0e7d7d44ffd 817 PRINTS PR00738 Glycosyl hydrolase family 20 signature 125 145 3.9E-41 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 Vc3S01_A1532 0ba82ac2edd0f09f50fae0e7d7d44ffd 817 PRINTS PR00738 Glycosyl hydrolase family 20 signature 313 326 3.9E-41 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 Vc3S01_A1532 0ba82ac2edd0f09f50fae0e7d7d44ffd 817 SUPERFAMILY SSF55545 31 165 5.63E-29 T 12-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 Vc3S01_A1532 0ba82ac2edd0f09f50fae0e7d7d44ffd 817 Gene3D G3DSA:3.20.20.80 164 448 3.3E-89 T 12-10-2018 Vc3S01_A1532 0ba82ac2edd0f09f50fae0e7d7d44ffd 817 Gene3D G3DSA:3.20.20.80 538 635 9.1E-15 T 12-10-2018 Vc3S01_A1532 0ba82ac2edd0f09f50fae0e7d7d44ffd 817 Gene3D G3DSA:3.30.379.10 14 162 9.1E-23 T 12-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 Vc3S01_A1532 0ba82ac2edd0f09f50fae0e7d7d44ffd 817 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 30 162 3.9E-14 T 12-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal Vc3S01_1030 107f1ee9c7d83d1d9fd710619d464c9c 214 Gene3D G3DSA:3.30.420.10 9 214 7.3E-55 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Vc3S01_1030 107f1ee9c7d83d1d9fd710619d464c9c 214 SUPERFAMILY SSF53098 10 208 9.34E-57 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Vc3S01_1030 107f1ee9c7d83d1d9fd710619d464c9c 214 TIGRFAM TIGR01298 RNaseT: ribonuclease T 10 209 2.0E-99 T 12-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 Vc3S01_1030 107f1ee9c7d83d1d9fd710619d464c9c 214 Hamap MF_00157 Ribonuclease T [rnt]. 1 214 115.486 T 12-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 Vc3S01_1030 107f1ee9c7d83d1d9fd710619d464c9c 214 Pfam PF00929 Exonuclease 20 195 1.4E-45 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Vc3S01_1030 107f1ee9c7d83d1d9fd710619d464c9c 214 SMART SM00479 18 204 8.9E-30 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Vc3S01_A1944 9ecdb7c26f8cd2cf665a9827a19123f5 565 SUPERFAMILY SSF51445 46 535 1.82E-81 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily Vc3S01_A1944 9ecdb7c26f8cd2cf665a9827a19123f5 565 Gene3D G3DSA:3.20.20.80 51 465 2.6E-154 T 12-10-2018 Vc3S01_A1944 9ecdb7c26f8cd2cf665a9827a19123f5 565 Gene3D G3DSA:3.90.400.10 133 207 2.6E-154 T 12-10-2018 Vc3S01_A1944 9ecdb7c26f8cd2cf665a9827a19123f5 565 Pfam PF00128 Alpha amylase, catalytic domain 83 344 3.8E-18 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Vc3S01_A1944 9ecdb7c26f8cd2cf665a9827a19123f5 565 PIRSF PIRSF003059 3 563 1.5E-218 T 12-10-2018 IPR016377 Sucrose/Glucosylglycerate phosphorylase-related Vc3S01_A1944 9ecdb7c26f8cd2cf665a9827a19123f5 565 SMART SM00642 66 486 3.1E-6 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Vc3S01_A1944 9ecdb7c26f8cd2cf665a9827a19123f5 565 Gene3D G3DSA:2.60.40.1180 505 563 2.8E-6 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta Vc3S01_1879 61978913f5291c6f510a13fd20a2e2ae 792 Gene3D G3DSA:1.20.1640.10 587 778 2.7E-16 T 12-10-2018 Vc3S01_1879 61978913f5291c6f510a13fd20a2e2ae 792 Gene3D G3DSA:1.20.1640.10 185 393 2.8E-11 T 12-10-2018 Vc3S01_1879 61978913f5291c6f510a13fd20a2e2ae 792 SUPERFAMILY SSF82866 591 768 3.27E-31 T 12-10-2018 Vc3S01_1879 61978913f5291c6f510a13fd20a2e2ae 792 PRINTS PR00702 Acriflavin resistance protein family signature 225 248 2.9E-5 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_1879 61978913f5291c6f510a13fd20a2e2ae 792 PRINTS PR00702 Acriflavin resistance protein family signature 281 305 2.9E-5 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_1879 61978913f5291c6f510a13fd20a2e2ae 792 PRINTS PR00702 Acriflavin resistance protein family signature 356 379 2.9E-5 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_1879 61978913f5291c6f510a13fd20a2e2ae 792 SUPERFAMILY SSF82866 161 382 6.15E-31 T 12-10-2018 Vc3S01_1879 61978913f5291c6f510a13fd20a2e2ae 792 Pfam PF03176 MMPL family 590 769 2.7E-15 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 Vc3S01_1879 61978913f5291c6f510a13fd20a2e2ae 792 Pfam PF03176 MMPL family 62 382 4.3E-22 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 Vc3S01_2997 bc6edda6c8548625a5645a9157c4fdae 298 SUPERFAMILY SSF53448 6 223 3.67E-57 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Vc3S01_2997 bc6edda6c8548625a5645a9157c4fdae 298 Gene3D G3DSA:3.90.550.10 1 257 4.5E-57 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Vc3S01_2997 bc6edda6c8548625a5645a9157c4fdae 298 Pfam PF00535 Glycosyl transferase family 2 9 148 2.3E-39 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Vc3S01_1320 47ed9be87a4afe82b9ab59393e55094f 94 Pfam PF04221 RelB antitoxin 5 44 4.8E-5 T 12-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ Vc3S01_1320 47ed9be87a4afe82b9ab59393e55094f 94 Gene3D G3DSA:1.10.1220.10 2 73 6.1E-6 T 12-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 Vc3S01_2659 5ec578fc9a698fd46410962bfa5bb98d 258 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 3 230 3.5E-116 T 12-10-2018 IPR022488 Polyphosphate kinase-2-related Vc3S01_2659 5ec578fc9a698fd46410962bfa5bb98d 258 SUPERFAMILY SSF52540 35 223 2.01E-31 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2659 5ec578fc9a698fd46410962bfa5bb98d 258 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 3 230 7.4E-118 T 12-10-2018 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 KEGG: 00190+2.7.4.1 Vc3S01_2659 5ec578fc9a698fd46410962bfa5bb98d 258 PIRSF PIRSF028756 1 258 1.0E-134 T 12-10-2018 IPR016898 Polyphosphate kinase 2 KEGG: 00190+2.7.4.1 Vc3S01_2659 5ec578fc9a698fd46410962bfa5bb98d 258 Gene3D G3DSA:3.40.50.300 1 242 9.3E-103 T 12-10-2018 Vc3S01_2643 72d3a7a77af4ee7b6e749362da329839 239 SUPERFAMILY SSF75217 5 175 3.27E-37 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases Vc3S01_2643 72d3a7a77af4ee7b6e749362da329839 239 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 238 4.7E-83 T 12-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 Vc3S01_2643 72d3a7a77af4ee7b6e749362da329839 239 Gene3D G3DSA:3.40.1280.10 1 163 7.7E-62 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Vc3S01_2643 72d3a7a77af4ee7b6e749362da329839 239 Gene3D G3DSA:1.10.8.590 173 239 3.7E-28 T 12-10-2018 Vc3S01_2643 72d3a7a77af4ee7b6e749362da329839 239 Pfam PF00588 SpoU rRNA Methylase family 5 153 1.3E-34 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 Vc3S01_2643 72d3a7a77af4ee7b6e749362da329839 239 PIRSF PIRSF004808 1 239 3.3E-72 T 12-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 Vc3S01_2710 28a98f205479465a1b6fb6faa5852cb3 520 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 5 476 19.867 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Vc3S01_2710 28a98f205479465a1b6fb6faa5852cb3 520 Pfam PF03023 MviN-like protein 30 483 3.0E-143 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Vc3S01_2710 28a98f205479465a1b6fb6faa5852cb3 520 PIRSF PIRSF002869 1 517 1.2E-149 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Vc3S01_2710 28a98f205479465a1b6fb6faa5852cb3 520 PRINTS PR01806 Virulence factor MviN signature 166 187 1.9E-76 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Vc3S01_2710 28a98f205479465a1b6fb6faa5852cb3 520 PRINTS PR01806 Virulence factor MviN signature 54 70 1.9E-76 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Vc3S01_2710 28a98f205479465a1b6fb6faa5852cb3 520 PRINTS PR01806 Virulence factor MviN signature 35 54 1.9E-76 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Vc3S01_2710 28a98f205479465a1b6fb6faa5852cb3 520 PRINTS PR01806 Virulence factor MviN signature 142 166 1.9E-76 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Vc3S01_2710 28a98f205479465a1b6fb6faa5852cb3 520 PRINTS PR01806 Virulence factor MviN signature 268 294 1.9E-76 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Vc3S01_2710 28a98f205479465a1b6fb6faa5852cb3 520 PRINTS PR01806 Virulence factor MviN signature 418 435 1.9E-76 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Vc3S01_2710 28a98f205479465a1b6fb6faa5852cb3 520 PRINTS PR01806 Virulence factor MviN signature 366 385 1.9E-76 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Vc3S01_2710 28a98f205479465a1b6fb6faa5852cb3 520 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 5 511 3.6E-137 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Vc3S01_A1897 a185c8d1ad06a2821e319cee82daaa21 539 Gene3D G3DSA:2.60.120.260 23 162 6.9E-14 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily Vc3S01_A1897 a185c8d1ad06a2821e319cee82daaa21 539 SUPERFAMILY SSF49785 23 161 1.56E-23 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily Vc3S01_A1897 a185c8d1ad06a2821e319cee82daaa21 539 SUPERFAMILY SSF54060 292 531 1.88E-51 T 12-10-2018 Vc3S01_A1897 a185c8d1ad06a2821e319cee82daaa21 539 Pfam PF04231 Endonuclease I 295 531 2.0E-102 T 12-10-2018 IPR007346 Endonuclease I GO:0004518 Vc3S01_A1897 a185c8d1ad06a2821e319cee82daaa21 539 Pfam PF02018 Carbohydrate binding domain 23 143 1.9E-8 T 12-10-2018 IPR003305 Carbohydrate-binding, CenC-like GO:0016798 Vc3S01_A0501 d5d598f4df3a3d10d1867f8b28ab680c 510 SUPERFAMILY SSF52540 187 421 7.37E-68 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A0501 d5d598f4df3a3d10d1867f8b28ab680c 510 Gene3D G3DSA:3.30.450.40 4 172 1.1E-16 T 12-10-2018 IPR029016 GAF-like domain superfamily Vc3S01_A0501 d5d598f4df3a3d10d1867f8b28ab680c 510 SUPERFAMILY SSF46689 459 509 2.37E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_A0501 d5d598f4df3a3d10d1867f8b28ab680c 510 Gene3D G3DSA:1.10.10.60 458 510 6.8E-10 T 12-10-2018 Vc3S01_A0501 d5d598f4df3a3d10d1867f8b28ab680c 510 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 401 410 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Vc3S01_A0501 d5d598f4df3a3d10d1867f8b28ab680c 510 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 274 289 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Vc3S01_A0501 d5d598f4df3a3d10d1867f8b28ab680c 510 SMART SM00065 20 168 7.6E-11 T 12-10-2018 IPR003018 GAF domain GO:0005515 Vc3S01_A0501 d5d598f4df3a3d10d1867f8b28ab680c 510 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 212 225 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Vc3S01_A0501 d5d598f4df3a3d10d1867f8b28ab680c 510 Pfam PF00158 Sigma-54 interaction domain 188 354 9.2E-68 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Vc3S01_A0501 d5d598f4df3a3d10d1867f8b28ab680c 510 Gene3D G3DSA:1.10.8.60 359 424 4.2E-20 T 12-10-2018 Vc3S01_A0501 d5d598f4df3a3d10d1867f8b28ab680c 510 Gene3D G3DSA:3.40.50.300 175 358 8.2E-63 T 12-10-2018 Vc3S01_A0501 d5d598f4df3a3d10d1867f8b28ab680c 510 Pfam PF01590 GAF domain 24 154 1.8E-9 T 12-10-2018 IPR003018 GAF domain GO:0005515 Vc3S01_A0501 d5d598f4df3a3d10d1867f8b28ab680c 510 SUPERFAMILY SSF55781 7 167 2.4E-16 T 12-10-2018 Vc3S01_A0501 d5d598f4df3a3d10d1867f8b28ab680c 510 SMART SM00382 208 351 1.3E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_2602 175bc53b2c36e194969e3370abce973d 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 69 1.2E-20 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_2602 175bc53b2c36e194969e3370abce973d 297 Pfam PF03466 LysR substrate binding domain 95 291 5.5E-17 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_2602 175bc53b2c36e194969e3370abce973d 297 Gene3D G3DSA:1.10.10.10 9 98 1.0E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_2602 175bc53b2c36e194969e3370abce973d 297 Gene3D G3DSA:3.40.190.10 166 263 4.5E-48 T 12-10-2018 Vc3S01_2602 175bc53b2c36e194969e3370abce973d 297 SUPERFAMILY SSF53850 94 294 1.43E-21 T 12-10-2018 Vc3S01_2602 175bc53b2c36e194969e3370abce973d 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 1.7E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_2602 175bc53b2c36e194969e3370abce973d 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 1.7E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_2602 175bc53b2c36e194969e3370abce973d 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 1.7E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_2602 175bc53b2c36e194969e3370abce973d 297 Gene3D G3DSA:3.40.190.10 103 288 4.5E-48 T 12-10-2018 Vc3S01_2602 175bc53b2c36e194969e3370abce973d 297 SUPERFAMILY SSF46785 4 116 2.36E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_3201 e49b2f51502894568fb363131790dafc 258 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 34 254 1.4E-37 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Vc3S01_3201 e49b2f51502894568fb363131790dafc 258 Gene3D G3DSA:3.40.190.10 30 252 4.2E-63 T 12-10-2018 Vc3S01_3201 e49b2f51502894568fb363131790dafc 258 Gene3D G3DSA:3.40.190.10 120 215 4.2E-63 T 12-10-2018 Vc3S01_3201 e49b2f51502894568fb363131790dafc 258 SUPERFAMILY SSF53850 1 256 7.06E-51 T 12-10-2018 Vc3S01_3201 e49b2f51502894568fb363131790dafc 258 SMART SM00062 33 257 4.8E-39 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Vc3S01_3201 e49b2f51502894568fb363131790dafc 258 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 57 70 - T 12-10-2018 IPR018313 Solute-binding protein family 3, conserved site Vc3S01_2396 9d81f8b2392cea884457c973f8dd7ab5 402 SUPERFAMILY SSF52777 173 401 1.25E-90 T 12-10-2018 Vc3S01_2396 9d81f8b2392cea884457c973f8dd7ab5 402 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Vc3S01_2396 9d81f8b2392cea884457c973f8dd7ab5 402 Gene3D G3DSA:2.40.50.100 1 79 1.5E-21 T 12-10-2018 Vc3S01_2396 9d81f8b2392cea884457c973f8dd7ab5 402 Gene3D G3DSA:4.10.320.10 102 152 3.7E-22 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 Vc3S01_2396 9d81f8b2392cea884457c973f8dd7ab5 402 SUPERFAMILY SSF51230 1 95 2.75E-24 T 12-10-2018 IPR011053 Single hybrid motif Vc3S01_2396 9d81f8b2392cea884457c973f8dd7ab5 402 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 3 402 3.8E-188 T 12-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 Vc3S01_2396 9d81f8b2392cea884457c973f8dd7ab5 402 Pfam PF02817 e3 binding domain 113 146 3.4E-13 T 12-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 Vc3S01_2396 9d81f8b2392cea884457c973f8dd7ab5 402 Gene3D G3DSA:3.30.559.10 170 402 2.9E-98 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Vc3S01_2396 9d81f8b2392cea884457c973f8dd7ab5 402 SUPERFAMILY SSF47005 106 150 5.49E-12 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 Vc3S01_2396 9d81f8b2392cea884457c973f8dd7ab5 402 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 172 400 1.9E-82 T 12-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 Vc3S01_2396 9d81f8b2392cea884457c973f8dd7ab5 402 Pfam PF00364 Biotin-requiring enzyme 4 76 3.5E-18 T 12-10-2018 IPR000089 Biotin/lipoyl attachment Vc3S01_2886 5324e9684fef9d21a2d4312b6f95ae39 452 SUPERFAMILY SSF53623 97 308 7.72E-53 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Vc3S01_2886 5324e9684fef9d21a2d4312b6f95ae39 452 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 449 5.1E-260 T 12-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 Vc3S01_2886 5324e9684fef9d21a2d4312b6f95ae39 452 Pfam PF08245 Mur ligase middle domain 108 291 7.8E-21 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Vc3S01_2886 5324e9684fef9d21a2d4312b6f95ae39 452 SUPERFAMILY SSF53244 311 448 1.7E-37 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Vc3S01_2886 5324e9684fef9d21a2d4312b6f95ae39 452 Pfam PF01225 Mur ligase family, catalytic domain 2 101 8.1E-19 T 12-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 Vc3S01_2886 5324e9684fef9d21a2d4312b6f95ae39 452 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 449 59.179 T 12-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 Vc3S01_2886 5324e9684fef9d21a2d4312b6f95ae39 452 SUPERFAMILY SSF51984 1 89 1.14E-22 T 12-10-2018 Vc3S01_2886 5324e9684fef9d21a2d4312b6f95ae39 452 Gene3D G3DSA:3.40.50.720 1 90 9.2E-36 T 12-10-2018 Vc3S01_2886 5324e9684fef9d21a2d4312b6f95ae39 452 Gene3D G3DSA:3.40.1190.10 91 313 7.1E-57 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Vc3S01_2886 5324e9684fef9d21a2d4312b6f95ae39 452 Gene3D G3DSA:3.90.190.20 314 450 2.1E-31 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Vc3S01_2886 5324e9684fef9d21a2d4312b6f95ae39 452 Pfam PF02875 Mur ligase family, glutamate ligase domain 311 387 1.3E-11 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Vc3S01_A1512 6b64b6407393c7c89e35fe746c7e6ca4 115 SMART SM00530 9 64 1.7E-9 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Vc3S01_A1512 6b64b6407393c7c89e35fe746c7e6ca4 115 Pfam PF13560 Helix-turn-helix domain 12 61 1.8E-10 T 12-10-2018 Vc3S01_A1512 6b64b6407393c7c89e35fe746c7e6ca4 115 Gene3D G3DSA:1.10.260.40 3 69 8.1E-11 T 12-10-2018 Vc3S01_A1512 6b64b6407393c7c89e35fe746c7e6ca4 115 SUPERFAMILY SSF47413 6 61 1.77E-11 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Vc3S01_0788 2120b34613c6d309ac07939b5aba5bd6 804 Gene3D G3DSA:3.10.20.310 264 346 2.6E-15 T 12-10-2018 Vc3S01_0788 2120b34613c6d309ac07939b5aba5bd6 804 PIRSF PIRSF006076 1 804 1.8E-245 T 12-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 Vc3S01_0788 2120b34613c6d309ac07939b5aba5bd6 804 Gene3D G3DSA:2.40.160.50 425 804 2.0E-122 T 12-10-2018 Vc3S01_0788 2120b34613c6d309ac07939b5aba5bd6 804 Gene3D G3DSA:3.10.20.310 92 174 2.6E-17 T 12-10-2018 Vc3S01_0788 2120b34613c6d309ac07939b5aba5bd6 804 Gene3D G3DSA:3.10.20.310 175 263 5.0E-22 T 12-10-2018 Vc3S01_0788 2120b34613c6d309ac07939b5aba5bd6 804 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 2 804 25.823 T 12-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 Vc3S01_0788 2120b34613c6d309ac07939b5aba5bd6 804 Gene3D G3DSA:3.10.20.310 347 424 6.7E-26 T 12-10-2018 Vc3S01_0788 2120b34613c6d309ac07939b5aba5bd6 804 Gene3D G3DSA:3.10.20.310 18 91 1.3E-19 T 12-10-2018 Vc3S01_0788 2120b34613c6d309ac07939b5aba5bd6 804 Pfam PF01103 Surface antigen 448 804 2.1E-91 T 12-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 Vc3S01_0788 2120b34613c6d309ac07939b5aba5bd6 804 Pfam PF07244 Surface antigen variable number repeat 92 172 8.2E-12 T 12-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 Vc3S01_0788 2120b34613c6d309ac07939b5aba5bd6 804 Pfam PF07244 Surface antigen variable number repeat 347 420 5.6E-17 T 12-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 Vc3S01_0788 2120b34613c6d309ac07939b5aba5bd6 804 Pfam PF07244 Surface antigen variable number repeat 266 344 6.1E-11 T 12-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 Vc3S01_0788 2120b34613c6d309ac07939b5aba5bd6 804 Pfam PF07244 Surface antigen variable number repeat 176 263 3.9E-15 T 12-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 Vc3S01_0788 2120b34613c6d309ac07939b5aba5bd6 804 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 24 804 6.1E-278 T 12-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 Vc3S01_1975 800549ceac9c71aabbafb6e17ed02944 441 Gene3D G3DSA:1.10.287.130 185 294 3.2E-7 T 12-10-2018 Vc3S01_1975 800549ceac9c71aabbafb6e17ed02944 441 SUPERFAMILY SSF55874 301 436 4.45E-24 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_1975 800549ceac9c71aabbafb6e17ed02944 441 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 418 7.0E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_1975 800549ceac9c71aabbafb6e17ed02944 441 PRINTS PR00344 Bacterial sensor protein C-terminal signature 369 383 7.0E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_1975 800549ceac9c71aabbafb6e17ed02944 441 SMART SM00387 334 440 7.4E-15 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_1975 800549ceac9c71aabbafb6e17ed02944 441 Gene3D G3DSA:3.30.565.10 301 440 1.3E-25 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_1975 800549ceac9c71aabbafb6e17ed02944 441 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 338 438 1.4E-11 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_1975 800549ceac9c71aabbafb6e17ed02944 441 SUPERFAMILY SSF47384 216 279 8.63E-5 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Vc3S01_2922 6fb4db0f6cee523d3fcbbccfe49a8604 444 ProSitePatterns PS00756 Protein secY signature 2. 171 188 - T 12-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Vc3S01_2922 6fb4db0f6cee523d3fcbbccfe49a8604 444 Hamap MF_01465 Protein translocase subunit SecY [secY]. 9 434 29.042 T 12-10-2018 IPR026593 Protein translocase subunit SecY Vc3S01_2922 6fb4db0f6cee523d3fcbbccfe49a8604 444 ProSitePatterns PS00755 Protein secY signature 1. 76 95 - T 12-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Vc3S01_2922 6fb4db0f6cee523d3fcbbccfe49a8604 444 Pfam PF00344 SecY translocase 76 418 1.6E-117 T 12-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Vc3S01_2922 6fb4db0f6cee523d3fcbbccfe49a8604 444 PIRSF PIRSF004557 10 442 1.8E-121 T 12-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Vc3S01_2922 6fb4db0f6cee523d3fcbbccfe49a8604 444 Gene3D G3DSA:1.10.3370.10 10 430 1.8E-159 T 12-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Vc3S01_2922 6fb4db0f6cee523d3fcbbccfe49a8604 444 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 21 430 5.2E-134 T 12-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Vc3S01_2922 6fb4db0f6cee523d3fcbbccfe49a8604 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 371 389 1.9E-95 T 12-10-2018 Vc3S01_2922 6fb4db0f6cee523d3fcbbccfe49a8604 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 403 421 1.9E-95 T 12-10-2018 Vc3S01_2922 6fb4db0f6cee523d3fcbbccfe49a8604 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 152 177 1.9E-95 T 12-10-2018 Vc3S01_2922 6fb4db0f6cee523d3fcbbccfe49a8604 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 178 201 1.9E-95 T 12-10-2018 Vc3S01_2922 6fb4db0f6cee523d3fcbbccfe49a8604 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 1.9E-95 T 12-10-2018 Vc3S01_2922 6fb4db0f6cee523d3fcbbccfe49a8604 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 1.9E-95 T 12-10-2018 Vc3S01_2922 6fb4db0f6cee523d3fcbbccfe49a8604 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 316 338 1.9E-95 T 12-10-2018 Vc3S01_2922 6fb4db0f6cee523d3fcbbccfe49a8604 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 1.9E-95 T 12-10-2018 Vc3S01_2922 6fb4db0f6cee523d3fcbbccfe49a8604 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 270 289 1.9E-95 T 12-10-2018 Vc3S01_2922 6fb4db0f6cee523d3fcbbccfe49a8604 444 SUPERFAMILY SSF103491 15 425 2.09E-130 T 12-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Vc3S01_p20191 0a1cd1cc840784b9749b70f8263759f1 150 Pfam PF07510 Protein of unknown function (DUF1524) 70 121 3.8E-6 T 12-10-2018 IPR011089 Domain of unknown function DUF1524 Vc3S01_A0942 3ac5418d493666018116a264f820a074 661 Pfam PF00563 EAL domain 414 647 4.7E-57 T 12-10-2018 IPR001633 EAL domain Vc3S01_A0942 3ac5418d493666018116a264f820a074 661 SMART SM00052 405 652 3.0E-64 T 12-10-2018 IPR001633 EAL domain Vc3S01_A0942 3ac5418d493666018116a264f820a074 661 SUPERFAMILY SSF141868 412 659 1.57E-66 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_A0942 3ac5418d493666018116a264f820a074 661 Gene3D G3DSA:3.20.20.450 411 661 7.8E-72 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_A2034 3b093f0f3a6d577f4dbe4a1d2bbd2f67 637 SMART SM00387 502 627 3.4E-23 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_A2034 3b093f0f3a6d577f4dbe4a1d2bbd2f67 637 SUPERFAMILY SSF55874 465 598 4.32E-28 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_A2034 3b093f0f3a6d577f4dbe4a1d2bbd2f67 637 Gene3D G3DSA:3.30.450.20 73 191 2.1E-60 T 12-10-2018 Vc3S01_A2034 3b093f0f3a6d577f4dbe4a1d2bbd2f67 637 Pfam PF02743 Cache domain 54 225 6.0E-14 T 12-10-2018 IPR033479 Double Cache domain 1 Vc3S01_A2034 3b093f0f3a6d577f4dbe4a1d2bbd2f67 637 PRINTS PR00344 Bacterial sensor protein C-terminal signature 560 570 4.9E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_A2034 3b093f0f3a6d577f4dbe4a1d2bbd2f67 637 PRINTS PR00344 Bacterial sensor protein C-terminal signature 571 589 4.9E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_A2034 3b093f0f3a6d577f4dbe4a1d2bbd2f67 637 PRINTS PR00344 Bacterial sensor protein C-terminal signature 542 556 4.9E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_A2034 3b093f0f3a6d577f4dbe4a1d2bbd2f67 637 Gene3D G3DSA:3.30.450.20 61 286 2.1E-60 T 12-10-2018 Vc3S01_A2034 3b093f0f3a6d577f4dbe4a1d2bbd2f67 637 PIRSF PIRSF036431 10 634 1.3E-184 T 12-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) Vc3S01_A2034 3b093f0f3a6d577f4dbe4a1d2bbd2f67 637 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 505 625 2.0E-16 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_A2034 3b093f0f3a6d577f4dbe4a1d2bbd2f67 637 Gene3D G3DSA:3.30.565.10 462 628 7.9E-31 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_A2034 3b093f0f3a6d577f4dbe4a1d2bbd2f67 637 SUPERFAMILY SSF47384 375 455 1.33E-7 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Vc3S01_A2034 3b093f0f3a6d577f4dbe4a1d2bbd2f67 637 SUPERFAMILY SSF103190 71 199 8.24E-20 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Vc3S01_A2034 3b093f0f3a6d577f4dbe4a1d2bbd2f67 637 Gene3D G3DSA:1.10.287.130 366 453 3.4E-15 T 12-10-2018 Vc3S01_A0768 48c84820be4600a90f20d0220a0fff72 159 PIRSF PIRSF005900 1 159 2.2E-45 T 12-10-2018 IPR002177 DNA-binding protein Dps Vc3S01_A0768 48c84820be4600a90f20d0220a0fff72 159 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 135 153 7.0E-14 T 12-10-2018 IPR002177 DNA-binding protein Dps Vc3S01_A0768 48c84820be4600a90f20d0220a0fff72 159 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 40 56 7.0E-14 T 12-10-2018 IPR002177 DNA-binding protein Dps Vc3S01_A0768 48c84820be4600a90f20d0220a0fff72 159 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 64 80 7.0E-14 T 12-10-2018 IPR002177 DNA-binding protein Dps Vc3S01_A0768 48c84820be4600a90f20d0220a0fff72 159 SUPERFAMILY SSF47240 4 158 1.69E-43 T 12-10-2018 IPR009078 Ferritin-like superfamily Vc3S01_A0768 48c84820be4600a90f20d0220a0fff72 159 ProSitePatterns PS00818 Dps protein family signature 1. 40 56 - T 12-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 Vc3S01_A0768 48c84820be4600a90f20d0220a0fff72 159 ProSitePatterns PS00819 Dps protein family signature 2. 66 80 - T 12-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 Vc3S01_A0768 48c84820be4600a90f20d0220a0fff72 159 Pfam PF00210 Ferritin-like domain 20 158 4.2E-24 T 12-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 Vc3S01_A0768 48c84820be4600a90f20d0220a0fff72 159 Gene3D G3DSA:1.20.1260.10 2 158 1.3E-53 T 12-10-2018 IPR012347 Ferritin-like Vc3S01_A0352 71ed8c2298c9cd470e782d28b8821036 169 Pfam PF03748 Flagellar basal body-associated protein FliL 70 169 5.0E-14 T 12-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 Vc3S01_2709 3260ea07cac228d0b99b2fde0f3701c6 311 SUPERFAMILY SSF52374 15 175 2.42E-36 T 12-10-2018 Vc3S01_2709 3260ea07cac228d0b99b2fde0f3701c6 311 SMART SM00904 183 307 3.2E-63 T 12-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 Vc3S01_2709 3260ea07cac228d0b99b2fde0f3701c6 311 PIRSF PIRSF004491 1 311 2.7E-107 T 12-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 Vc3S01_2709 3260ea07cac228d0b99b2fde0f3701c6 311 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 18 54 6.5E-8 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Vc3S01_2709 3260ea07cac228d0b99b2fde0f3701c6 311 Gene3D G3DSA:2.40.30.30 188 311 5.3E-40 T 12-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 Vc3S01_2709 3260ea07cac228d0b99b2fde0f3701c6 311 Gene3D G3DSA:3.40.50.620 1 187 1.7E-62 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Vc3S01_2709 3260ea07cac228d0b99b2fde0f3701c6 311 Pfam PF06574 FAD synthetase 12 167 1.8E-59 T 12-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 Vc3S01_2709 3260ea07cac228d0b99b2fde0f3701c6 311 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 307 1.2E-107 T 12-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 Vc3S01_2709 3260ea07cac228d0b99b2fde0f3701c6 311 Pfam PF01687 Riboflavin kinase 184 306 1.5E-38 T 12-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 Vc3S01_2709 3260ea07cac228d0b99b2fde0f3701c6 311 SUPERFAMILY SSF82114 174 309 6.1E-45 T 12-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 Vc3S01_A0437 6ccda0e6eef917090f38a659cefc6ea0 182 Gene3D G3DSA:1.10.1760.20 1 177 2.9E-19 T 12-10-2018 Vc3S01_A0437 6ccda0e6eef917090f38a659cefc6ea0 182 Hamap MF_01572 UPF0397 protein . 1 182 21.136 T 12-10-2018 IPR022914 Protein of unknown function UPF0397 Vc3S01_A0437 6ccda0e6eef917090f38a659cefc6ea0 182 Pfam PF07155 ECF-type riboflavin transporter, S component 3 171 7.6E-44 T 12-10-2018 IPR009825 ECF transporter, substrate-specific component-like GO:0016020 Vc3S01_A1324 4cd19a64978da28e4ff48d29ee441b11 538 SMART SM00990 429 536 5.9E-23 T 12-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 Vc3S01_A1324 4cd19a64978da28e4ff48d29ee441b11 538 Pfam PF08774 VRR-NUC domain 430 535 4.8E-23 T 12-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 Vc3S01_A1324 4cd19a64978da28e4ff48d29ee441b11 538 Gene3D G3DSA:3.40.1350.10 474 538 1.7E-10 T 12-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 Vc3S01_1113 8388e5bf3ac19d4aa31f707bed7cc21e 253 Pfam PF00486 Transcriptional regulatory protein, C terminal 17 90 4.4E-13 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Vc3S01_1113 8388e5bf3ac19d4aa31f707bed7cc21e 253 SUPERFAMILY SSF46894 3 91 6.24E-16 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Vc3S01_1113 8388e5bf3ac19d4aa31f707bed7cc21e 253 SMART SM00862 16 90 1.1E-12 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Vc3S01_1113 8388e5bf3ac19d4aa31f707bed7cc21e 253 Gene3D G3DSA:1.10.10.10 1 97 1.7E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A1596 30536409f33c67b6137934d8d9c9b53a 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 8.5E-29 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Vc3S01_A1596 30536409f33c67b6137934d8d9c9b53a 70 SMART SM00357 6 70 1.6E-29 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 Vc3S01_A1596 30536409f33c67b6137934d8d9c9b53a 70 SUPERFAMILY SSF50249 4 69 1.08E-24 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Vc3S01_A1596 30536409f33c67b6137934d8d9c9b53a 70 Gene3D G3DSA:2.40.50.140 2 69 3.8E-29 T 12-10-2018 Vc3S01_A1596 30536409f33c67b6137934d8d9c9b53a 70 PRINTS PR00050 Cold shock protein signature 28 37 3.0E-17 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Vc3S01_A1596 30536409f33c67b6137934d8d9c9b53a 70 PRINTS PR00050 Cold shock protein signature 7 22 3.0E-17 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Vc3S01_A1596 30536409f33c67b6137934d8d9c9b53a 70 PRINTS PR00050 Cold shock protein signature 43 61 3.0E-17 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Vc3S01_A1596 30536409f33c67b6137934d8d9c9b53a 70 PIRSF PIRSF002599 1 70 5.6E-24 T 12-10-2018 IPR012156 Cold shock, CspA GO:0003676 Vc3S01_2053 c702de142d445ff1bcfe1fb7b16599cb 430 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 4 424 42.797 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Vc3S01_2053 c702de142d445ff1bcfe1fb7b16599cb 430 SUPERFAMILY SSF53720 4 424 2.75E-95 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Vc3S01_2053 c702de142d445ff1bcfe1fb7b16599cb 430 Gene3D G3DSA:3.40.50.1980 30 229 4.5E-128 T 12-10-2018 Vc3S01_2053 c702de142d445ff1bcfe1fb7b16599cb 430 Gene3D G3DSA:3.40.50.1980 231 346 4.5E-128 T 12-10-2018 Vc3S01_2053 c702de142d445ff1bcfe1fb7b16599cb 430 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 423 2.4E-168 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Vc3S01_2053 c702de142d445ff1bcfe1fb7b16599cb 430 Pfam PF00815 Histidinol dehydrogenase 26 424 5.0E-173 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Vc3S01_2053 c702de142d445ff1bcfe1fb7b16599cb 430 PRINTS PR00083 Histidinol dehydrogenase signature 227 248 2.0E-103 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Vc3S01_2053 c702de142d445ff1bcfe1fb7b16599cb 430 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 2.0E-103 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Vc3S01_2053 c702de142d445ff1bcfe1fb7b16599cb 430 PRINTS PR00083 Histidinol dehydrogenase signature 165 191 2.0E-103 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Vc3S01_2053 c702de142d445ff1bcfe1fb7b16599cb 430 PRINTS PR00083 Histidinol dehydrogenase signature 134 160 2.0E-103 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Vc3S01_2053 c702de142d445ff1bcfe1fb7b16599cb 430 PRINTS PR00083 Histidinol dehydrogenase signature 358 376 2.0E-103 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Vc3S01_2053 c702de142d445ff1bcfe1fb7b16599cb 430 PRINTS PR00083 Histidinol dehydrogenase signature 195 220 2.0E-103 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Vc3S01_2053 c702de142d445ff1bcfe1fb7b16599cb 430 PRINTS PR00083 Histidinol dehydrogenase signature 317 342 2.0E-103 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Vc3S01_2053 c702de142d445ff1bcfe1fb7b16599cb 430 PRINTS PR00083 Histidinol dehydrogenase signature 249 268 2.0E-103 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Vc3S01_2053 c702de142d445ff1bcfe1fb7b16599cb 430 PIRSF PIRSF000099 1 427 2.2E-172 T 12-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Vc3S01_2053 c702de142d445ff1bcfe1fb7b16599cb 430 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 227 259 - T 12-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 Vc3S01_1097 4445e497dbd76c26ff3cc606ac0a1a5a 271 SUPERFAMILY SSF56752 1 266 2.49E-69 T 12-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 Vc3S01_1097 4445e497dbd76c26ff3cc606ac0a1a5a 271 Pfam PF01063 Amino-transferase class IV 24 246 2.4E-45 T 12-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 Vc3S01_1097 4445e497dbd76c26ff3cc606ac0a1a5a 271 Gene3D G3DSA:3.20.10.10 112 271 9.8E-53 T 12-10-2018 Vc3S01_1097 4445e497dbd76c26ff3cc606ac0a1a5a 271 ProSitePatterns PS00770 Aminotransferases class-IV signature. 173 202 - T 12-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 Vc3S01_1097 4445e497dbd76c26ff3cc606ac0a1a5a 271 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 3 266 3.1E-106 T 12-10-2018 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 Vc3S01_1097 4445e497dbd76c26ff3cc606ac0a1a5a 271 Gene3D G3DSA:3.30.470.10 1 106 1.3E-25 T 12-10-2018 Vc3S01_0180 480a614e7ba3344207d3d42792028bf9 523 Gene3D G3DSA:1.25.40.10 354 516 3.0E-20 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_0180 480a614e7ba3344207d3d42792028bf9 523 SUPERFAMILY SSF46894 6 103 4.25E-17 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Vc3S01_0180 480a614e7ba3344207d3d42792028bf9 523 Pfam PF00486 Transcriptional regulatory protein, C terminal 25 100 3.9E-15 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Vc3S01_0180 480a614e7ba3344207d3d42792028bf9 523 SMART SM00862 24 100 3.5E-13 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Vc3S01_0180 480a614e7ba3344207d3d42792028bf9 523 SUPERFAMILY SSF48452 339 486 3.03E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_0180 480a614e7ba3344207d3d42792028bf9 523 Gene3D G3DSA:1.10.10.10 5 105 2.2E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_0603 cde574fde22d2956b347ff66e2564900 328 SUPERFAMILY SSF161098 93 324 1.29E-15 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_0603 cde574fde22d2956b347ff66e2564900 328 Gene3D G3DSA:1.10.3720.10 87 327 8.5E-19 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_0603 cde574fde22d2956b347ff66e2564900 328 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 325 6.3E-39 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Vc3S01_2035 2ec92d8d0f5fe6805cbd0245185993e2 286 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 14 278 7.2E-114 T 12-10-2018 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 Vc3S01_2035 2ec92d8d0f5fe6805cbd0245185993e2 286 Gene3D G3DSA:1.20.1080.10 27 280 1.0E-95 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 Vc3S01_2035 2ec92d8d0f5fe6805cbd0245185993e2 286 Pfam PF01226 Formate/nitrite transporter 14 275 3.5E-74 T 12-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 Vc3S01_2035 2ec92d8d0f5fe6805cbd0245185993e2 286 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 82 91 - T 12-10-2018 IPR024002 Formate/nitrite transporter, conserved site Vc3S01_2035 2ec92d8d0f5fe6805cbd0245185993e2 286 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 25 279 1.2E-77 T 12-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 Vc3S01_0353 81b42d495108996fa3ad3360ca325500 182 SMART SM00857 2 136 2.5E-61 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Vc3S01_0353 81b42d495108996fa3ad3360ca325500 182 ProSitePatterns PS00398 Site-specific recombinases signature 2. 55 67 - T 12-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 Vc3S01_0353 81b42d495108996fa3ad3360ca325500 182 Pfam PF00239 Resolvase, N terminal domain 3 136 7.9E-47 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Vc3S01_0353 81b42d495108996fa3ad3360ca325500 182 Gene3D G3DSA:3.40.50.1390 1 125 5.4E-50 T 12-10-2018 Vc3S01_0353 81b42d495108996fa3ad3360ca325500 182 SUPERFAMILY SSF53041 1 135 1.12E-47 T 12-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 Vc3S01_0353 81b42d495108996fa3ad3360ca325500 182 ProSitePatterns PS00397 Site-specific recombinases active site. 5 13 - T 12-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 Vc3S01_A0350 ce74512ad7ee0e36b585bb420b8b6886 285 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 12-10-2018 IPR000540 Flagellar motor protein MotA, conserved site Vc3S01_A0350 ce74512ad7ee0e36b585bb420b8b6886 285 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 1 281 1.4E-115 T 12-10-2018 IPR022522 Flagellar motor stator, MotA Vc3S01_A0350 ce74512ad7ee0e36b585bb420b8b6886 285 Pfam PF01618 MotA/TolQ/ExbB proton channel family 134 238 8.4E-9 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Vc3S01_2247 7d6c9f586efd582fa5d1c9ee386a0e39 256 SUPERFAMILY SSF53850 1 253 1.26E-69 T 12-10-2018 Vc3S01_2247 7d6c9f586efd582fa5d1c9ee386a0e39 256 SMART SM00079 26 251 2.0E-4 T 12-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 Vc3S01_2247 7d6c9f586efd582fa5d1c9ee386a0e39 256 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 250 9.6E-62 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Vc3S01_2247 7d6c9f586efd582fa5d1c9ee386a0e39 256 SMART SM00062 26 252 1.5E-69 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Vc3S01_2247 7d6c9f586efd582fa5d1c9ee386a0e39 256 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 49 62 - T 12-10-2018 IPR018313 Solute-binding protein family 3, conserved site Vc3S01_2247 7d6c9f586efd582fa5d1c9ee386a0e39 256 Gene3D G3DSA:3.40.190.10 112 209 3.3E-72 T 12-10-2018 Vc3S01_2247 7d6c9f586efd582fa5d1c9ee386a0e39 256 Gene3D G3DSA:3.40.190.10 28 248 3.3E-72 T 12-10-2018 Vc3S01_2247 7d6c9f586efd582fa5d1c9ee386a0e39 256 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 7 249 3.3E-81 T 12-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 Vc3S01_A1235 94b96d22184336b5504232eead6f2af6 514 Gene3D G3DSA:1.25.40.10 194 291 1.0E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_A1235 94b96d22184336b5504232eead6f2af6 514 SUPERFAMILY SSF48452 197 285 9.49E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_A1235 94b96d22184336b5504232eead6f2af6 514 Gene3D G3DSA:3.40.50.2300 12 145 2.9E-17 T 12-10-2018 Vc3S01_A1235 94b96d22184336b5504232eead6f2af6 514 Pfam PF00072 Response regulator receiver domain 13 128 3.0E-12 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A1235 94b96d22184336b5504232eead6f2af6 514 SMART SM00448 11 129 1.1E-7 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A1235 94b96d22184336b5504232eead6f2af6 514 SUPERFAMILY SSF52172 10 166 4.98E-18 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_1806 f8e906f1f36cb68370df7683e1ad5841 235 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 1 234 46.634 T 12-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 Vc3S01_1806 f8e906f1f36cb68370df7683e1ad5841 235 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 4 233 3.8E-94 T 12-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 Vc3S01_1806 f8e906f1f36cb68370df7683e1ad5841 235 SUPERFAMILY SSF53167 2 233 3.01E-84 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 Vc3S01_1806 f8e906f1f36cb68370df7683e1ad5841 235 Gene3D G3DSA:3.40.50.1580 2 234 2.0E-69 T 12-10-2018 Vc3S01_1806 f8e906f1f36cb68370df7683e1ad5841 235 Pfam PF01048 Phosphorylase superfamily 16 218 1.1E-35 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 Vc3S01_2050 4a9181bf9244d735bb6584ffd7b6aed7 204 SUPERFAMILY SSF52317 5 203 4.74E-53 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Vc3S01_2050 4a9181bf9244d735bb6584ffd7b6aed7 204 Pfam PF00117 Glutamine amidotransferase class-I 8 202 5.5E-18 T 12-10-2018 IPR017926 Glutamine amidotransferase Vc3S01_2050 4a9181bf9244d735bb6584ffd7b6aed7 204 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 6 203 7.8E-69 T 12-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 Vc3S01_2050 4a9181bf9244d735bb6584ffd7b6aed7 204 PIRSF PIRSF000495 4 204 4.8E-65 T 12-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 Vc3S01_2050 4a9181bf9244d735bb6584ffd7b6aed7 204 Gene3D G3DSA:3.40.50.880 2 204 1.5E-73 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Vc3S01_2050 4a9181bf9244d735bb6584ffd7b6aed7 204 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 5 204 33.695 T 12-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 Vc3S01_A1090 fe2b208fe69ae1bda29e932785856c4e 233 SMART SM00382 39 225 6.4E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_A1090 fe2b208fe69ae1bda29e932785856c4e 233 Gene3D G3DSA:3.40.50.300 9 232 2.1E-70 T 12-10-2018 Vc3S01_A1090 fe2b208fe69ae1bda29e932785856c4e 233 Pfam PF00005 ABC transporter 30 176 1.8E-36 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_A1090 fe2b208fe69ae1bda29e932785856c4e 233 SUPERFAMILY SSF52540 12 229 2.54E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A1090 fe2b208fe69ae1bda29e932785856c4e 233 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_2633 e89105bef54aefd4fe59f42ba60b7d2c 141 SMART SM00562 3 140 8.2E-94 T 12-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Vc3S01_2633 e89105bef54aefd4fe59f42ba60b7d2c 141 Gene3D G3DSA:3.30.70.141 1 141 1.5E-61 T 12-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Vc3S01_2633 e89105bef54aefd4fe59f42ba60b7d2c 141 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 12-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Vc3S01_2633 e89105bef54aefd4fe59f42ba60b7d2c 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 2.8E-39 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Vc3S01_2633 e89105bef54aefd4fe59f42ba60b7d2c 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 2.8E-39 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Vc3S01_2633 e89105bef54aefd4fe59f42ba60b7d2c 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 2.8E-39 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Vc3S01_2633 e89105bef54aefd4fe59f42ba60b7d2c 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 2.8E-39 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Vc3S01_2633 e89105bef54aefd4fe59f42ba60b7d2c 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 2.8E-39 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Vc3S01_2633 e89105bef54aefd4fe59f42ba60b7d2c 141 SUPERFAMILY SSF54919 1 140 1.83E-62 T 12-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Vc3S01_2633 e89105bef54aefd4fe59f42ba60b7d2c 141 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 36.812 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Vc3S01_2633 e89105bef54aefd4fe59f42ba60b7d2c 141 Pfam PF00334 Nucleoside diphosphate kinase 4 138 1.0E-59 T 12-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Vc3S01_A1767 ac8c3dc3469616f2b74b979f9e5615aa 167 Pfam PF13637 Ankyrin repeats (many copies) 83 125 1.6E-6 T 12-10-2018 Vc3S01_A1767 ac8c3dc3469616f2b74b979f9e5615aa 167 SUPERFAMILY SSF48403 82 145 3.48E-9 T 12-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily Vc3S01_A1767 ac8c3dc3469616f2b74b979f9e5615aa 167 Gene3D G3DSA:1.25.40.20 72 150 3.4E-8 T 12-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily Vc3S01_A1142 66c9528894a1eeab0ca588133c2c4801 408 Gene3D G3DSA:2.40.160.180 122 407 9.4E-28 T 12-10-2018 IPR038673 Carbohydrate-selective porin OprB superfamily Vc3S01_A1142 66c9528894a1eeab0ca588133c2c4801 408 Pfam PF04966 Carbohydrate-selective porin, OprB family 141 406 2.6E-18 T 12-10-2018 IPR007049 Carbohydrate-selective porin OprB GO:0008643|GO:0015288|GO:0016021 Vc3S01_2791 adb84becd77fca1f7246db0e3af69bd9 154 Pfam PF04386 Stringent starvation protein B 4 154 8.0E-43 T 12-10-2018 IPR007481 Stringent starvation protein B Vc3S01_2791 adb84becd77fca1f7246db0e3af69bd9 154 Gene3D G3DSA:2.30.30.220 1 127 3.2E-52 T 12-10-2018 IPR036760 SspB-like superfamily Vc3S01_2791 adb84becd77fca1f7246db0e3af69bd9 154 PIRSF PIRSF005276 1 154 1.1E-62 T 12-10-2018 IPR007481 Stringent starvation protein B Vc3S01_2791 adb84becd77fca1f7246db0e3af69bd9 154 SUPERFAMILY SSF101738 1 113 6.15E-49 T 12-10-2018 IPR036760 SspB-like superfamily Vc3S01_2278 74efa769a88e9cd99cf074df339aa063 116 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 12-10-2018 IPR019808 Histidine triad, conserved site Vc3S01_2278 74efa769a88e9cd99cf074df339aa063 116 Gene3D G3DSA:3.30.428.10 1 111 9.3E-36 T 12-10-2018 IPR036265 HIT-like superfamily Vc3S01_2278 74efa769a88e9cd99cf074df339aa063 116 PRINTS PR00332 Histidine triad family signature 27 45 2.9E-19 T 12-10-2018 IPR001310 Histidine triad (HIT) protein Vc3S01_2278 74efa769a88e9cd99cf074df339aa063 116 PRINTS PR00332 Histidine triad family signature 95 105 2.9E-19 T 12-10-2018 IPR001310 Histidine triad (HIT) protein Vc3S01_2278 74efa769a88e9cd99cf074df339aa063 116 PRINTS PR00332 Histidine triad family signature 6 22 2.9E-19 T 12-10-2018 IPR001310 Histidine triad (HIT) protein Vc3S01_2278 74efa769a88e9cd99cf074df339aa063 116 SUPERFAMILY SSF54197 2 112 8.08E-35 T 12-10-2018 IPR036265 HIT-like superfamily Vc3S01_2278 74efa769a88e9cd99cf074df339aa063 116 Pfam PF01230 HIT domain 12 109 1.1E-29 T 12-10-2018 IPR001310 Histidine triad (HIT) protein Vc3S01_1264 d03dd3629b2744388b67eff0b2f4ea93 463 SUPERFAMILY SSF46785 1 68 3.09E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_1264 d03dd3629b2744388b67eff0b2f4ea93 463 Gene3D G3DSA:3.90.1150.10 95 462 3.6E-105 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Vc3S01_1264 d03dd3629b2744388b67eff0b2f4ea93 463 Gene3D G3DSA:3.40.640.10 138 357 3.6E-105 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Vc3S01_1264 d03dd3629b2744388b67eff0b2f4ea93 463 SUPERFAMILY SSF53383 89 462 1.61E-98 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Vc3S01_1264 d03dd3629b2744388b67eff0b2f4ea93 463 Gene3D G3DSA:1.10.10.10 1 68 1.1E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_1264 d03dd3629b2744388b67eff0b2f4ea93 463 Pfam PF00155 Aminotransferase class I and II 143 458 2.2E-40 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Vc3S01_1264 d03dd3629b2744388b67eff0b2f4ea93 463 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 5.7E-12 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Vc3S01_1264 d03dd3629b2744388b67eff0b2f4ea93 463 SMART SM00345 7 66 8.1E-14 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Vc3S01_3142 4a80bf69e7fa50558ae56e8284c469d7 450 Pfam PF00069 Protein kinase domain 79 280 5.0E-38 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Vc3S01_3142 4a80bf69e7fa50558ae56e8284c469d7 450 Gene3D G3DSA:3.30.200.20 70 156 9.9E-20 T 12-10-2018 Vc3S01_3142 4a80bf69e7fa50558ae56e8284c469d7 450 SUPERFAMILY SSF56112 72 281 6.07E-52 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily Vc3S01_3142 4a80bf69e7fa50558ae56e8284c469d7 450 Gene3D G3DSA:1.10.510.10 157 326 7.4E-28 T 12-10-2018 Vc3S01_3142 4a80bf69e7fa50558ae56e8284c469d7 450 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 198 210 - T 12-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 Vc3S01_3142 4a80bf69e7fa50558ae56e8284c469d7 450 SMART SM00220 79 325 2.2E-27 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Vc3S01_3142 4a80bf69e7fa50558ae56e8284c469d7 450 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 85 110 - T 12-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 Vc3S01_A1524 e448964ddf44b255585bd4df18945ba0 194 Gene3D G3DSA:3.40.50.360 1 194 2.6E-52 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Vc3S01_A1524 e448964ddf44b255585bd4df18945ba0 194 Pfam PF02525 Flavodoxin-like fold 3 188 6.1E-35 T 12-10-2018 IPR003680 Flavodoxin-like fold Vc3S01_A1524 e448964ddf44b255585bd4df18945ba0 194 SUPERFAMILY SSF52218 1 192 1.31E-36 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Vc3S01_A1459 2a1ea21dfc1cc27854cf87904b3f2fee 378 Gene3D G3DSA:3.40.50.12780 18 324 6.5E-13 T 12-10-2018 Vc3S01_A1459 2a1ea21dfc1cc27854cf87904b3f2fee 378 Pfam PF04443 Acyl-protein synthetase, LuxE 6 371 1.8E-130 T 12-10-2018 IPR007534 Acyl-protein synthetase, LuxE GO:0008218|GO:0047474 MetaCyc: PWY-7723 Vc3S01_A1459 2a1ea21dfc1cc27854cf87904b3f2fee 378 PIRSF PIRSF016580 7 374 1.2E-162 T 12-10-2018 IPR016671 Acyl-protein synthetase, LuxE, bacterial GO:0008218|GO:0047474 MetaCyc: PWY-7723 Vc3S01_0790 552cf926344db65f04565e58cefe95c4 343 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 329 4.7E-115 T 12-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 Vc3S01_0790 552cf926344db65f04565e58cefe95c4 343 Gene3D G3DSA:3.40.1390.10 1 99 1.4E-31 T 12-10-2018 Vc3S01_0790 552cf926344db65f04565e58cefe95c4 343 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 23 88 1.8E-23 T 12-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 Vc3S01_0790 552cf926344db65f04565e58cefe95c4 343 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 110 144 9.3E-9 T 12-10-2018 IPR001451 Hexapeptide repeat Vc3S01_0790 552cf926344db65f04565e58cefe95c4 343 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 145 179 4.6E-7 T 12-10-2018 IPR001451 Hexapeptide repeat Vc3S01_0790 552cf926344db65f04565e58cefe95c4 343 SUPERFAMILY SSF51161 32 316 7.37E-83 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily Vc3S01_0790 552cf926344db65f04565e58cefe95c4 343 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 201 233 0.15 T 12-10-2018 IPR001451 Hexapeptide repeat Vc3S01_0790 552cf926344db65f04565e58cefe95c4 343 Gene3D G3DSA:2.160.10.10 100 308 2.9E-62 T 12-10-2018 Vc3S01_0790 552cf926344db65f04565e58cefe95c4 343 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 5 326 34.499 T 12-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 Vc3S01_A1461 1d70c1145e61257a7ef2682eb28a0e1a 355 Gene3D G3DSA:3.20.20.30 1 355 1.2E-133 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Vc3S01_A1461 1d70c1145e61257a7ef2682eb28a0e1a 355 Pfam PF00296 Luciferase-like monooxygenase 1 320 6.8E-50 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Vc3S01_A1461 1d70c1145e61257a7ef2682eb28a0e1a 355 SUPERFAMILY SSF51679 1 353 6.15E-93 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Vc3S01_A1461 1d70c1145e61257a7ef2682eb28a0e1a 355 PRINTS PR00089 Bacterial luciferase signature 232 250 2.0E-35 T 12-10-2018 IPR002103 Bacterial luciferase/NFP MetaCyc: PWY-7723 Vc3S01_A1461 1d70c1145e61257a7ef2682eb28a0e1a 355 PRINTS PR00089 Bacterial luciferase signature 181 196 2.0E-35 T 12-10-2018 IPR002103 Bacterial luciferase/NFP MetaCyc: PWY-7723 Vc3S01_A1461 1d70c1145e61257a7ef2682eb28a0e1a 355 PRINTS PR00089 Bacterial luciferase signature 197 212 2.0E-35 T 12-10-2018 IPR002103 Bacterial luciferase/NFP MetaCyc: PWY-7723 Vc3S01_A1461 1d70c1145e61257a7ef2682eb28a0e1a 355 PRINTS PR00089 Bacterial luciferase signature 167 178 2.0E-35 T 12-10-2018 IPR002103 Bacterial luciferase/NFP MetaCyc: PWY-7723 Vc3S01_A1461 1d70c1145e61257a7ef2682eb28a0e1a 355 PRINTS PR00089 Bacterial luciferase signature 214 231 2.0E-35 T 12-10-2018 IPR002103 Bacterial luciferase/NFP MetaCyc: PWY-7723 Vc3S01_A1461 1d70c1145e61257a7ef2682eb28a0e1a 355 ProSitePatterns PS00494 Bacterial luciferase subunits signature. 187 212 - T 12-10-2018 IPR018235 Bacterial luciferase, conserved site GO:0047646|GO:0055114 MetaCyc: PWY-7723 Vc3S01_2083 1bab6e6d1c02ac923a2231f44a7d7025 208 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 12 207 2.4E-63 T 12-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 Vc3S01_2083 1bab6e6d1c02ac923a2231f44a7d7025 208 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 38 196 1.5E-55 T 12-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like Vc3S01_2083 1bab6e6d1c02ac923a2231f44a7d7025 208 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 13 206 31.763 T 12-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 Vc3S01_2083 1bab6e6d1c02ac923a2231f44a7d7025 208 SUPERFAMILY SSF89392 30 207 5.49E-51 T 12-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX Vc3S01_2083 1bab6e6d1c02ac923a2231f44a7d7025 208 Gene3D G3DSA:2.50.20.10 26 207 2.3E-46 T 12-10-2018 Vc3S01_A1809 cb39eab54ad2328fc1c8e0454146ced9 396 Pfam PF07690 Major Facilitator Superfamily 10 340 9.4E-38 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Vc3S01_A1809 cb39eab54ad2328fc1c8e0454146ced9 396 Gene3D G3DSA:1.20.1720.10 4 380 1.8E-71 T 12-10-2018 Vc3S01_A1809 cb39eab54ad2328fc1c8e0454146ced9 396 ProSitePatterns PS00782 Transcription factor TFIIB repeat signature. 66 81 - T 12-10-2018 IPR023486 Transcription factor TFIIB, conserved site Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-674695|Reactome: R-HSA-6807505|Reactome: R-HSA-73776|Reactome: R-HSA-73779|Reactome: R-HSA-75953|Reactome: R-HSA-76042 Vc3S01_A1809 cb39eab54ad2328fc1c8e0454146ced9 396 SUPERFAMILY SSF103473 2 383 6.93E-50 T 12-10-2018 IPR036259 MFS transporter superfamily Vc3S01_A1809 cb39eab54ad2328fc1c8e0454146ced9 396 Hamap MF_01530 Multidrug resistance protein MdtL [mdtL]. 1 396 38.598 T 12-10-2018 IPR023697 Multidrug resistance protein MdtL GO:0005215|GO:0005886 Vc3S01_A1809 cb39eab54ad2328fc1c8e0454146ced9 396 ProSitePatterns PS00216 Sugar transport proteins signature 1. 58 75 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Vc3S01_A1336 789d169bd29677f049670924db35c708 286 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 286 1.3E-106 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_A1336 789d169bd29677f049670924db35c708 286 Pfam PF00231 ATP synthase 3 285 5.6E-96 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_A1336 789d169bd29677f049670924db35c708 286 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 272 285 - T 12-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_A1336 789d169bd29677f049670924db35c708 286 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 286 35.732 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_A1336 789d169bd29677f049670924db35c708 286 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 1.7E-37 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_A1336 789d169bd29677f049670924db35c708 286 PRINTS PR00126 ATP synthase gamma subunit signature 233 252 1.7E-37 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_A1336 789d169bd29677f049670924db35c708 286 PRINTS PR00126 ATP synthase gamma subunit signature 264 285 1.7E-37 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_A1336 789d169bd29677f049670924db35c708 286 PRINTS PR00126 ATP synthase gamma subunit signature 165 182 1.7E-37 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_A1336 789d169bd29677f049670924db35c708 286 Gene3D G3DSA:1.10.287.80 6 282 1.5E-108 T 12-10-2018 Vc3S01_A1336 789d169bd29677f049670924db35c708 286 SUPERFAMILY SSF52943 2 286 4.19E-96 T 12-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_A1336 789d169bd29677f049670924db35c708 286 Gene3D G3DSA:3.40.1380.10 61 205 1.5E-108 T 12-10-2018 Vc3S01_1889 4e361bbb533ac9b234f3cf0edcc04003 64 Pfam PF01632 Ribosomal protein L35 2 61 6.3E-21 T 12-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_1889 4e361bbb533ac9b234f3cf0edcc04003 64 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 30 - T 12-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_1889 4e361bbb533ac9b234f3cf0edcc04003 64 SUPERFAMILY SSF143034 2 63 2.75E-20 T 12-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_1889 4e361bbb533ac9b234f3cf0edcc04003 64 PRINTS PR00064 Ribosomal protein L35 signature 35 53 5.1E-19 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Vc3S01_1889 4e361bbb533ac9b234f3cf0edcc04003 64 PRINTS PR00064 Ribosomal protein L35 signature 3 20 5.1E-19 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Vc3S01_1889 4e361bbb533ac9b234f3cf0edcc04003 64 PRINTS PR00064 Ribosomal protein L35 signature 20 34 5.1E-19 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Vc3S01_1889 4e361bbb533ac9b234f3cf0edcc04003 64 Gene3D G3DSA:2.40.50.530 1 64 4.0E-18 T 12-10-2018 Vc3S01_1889 4e361bbb533ac9b234f3cf0edcc04003 64 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 63 17.885 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Vc3S01_1889 4e361bbb533ac9b234f3cf0edcc04003 64 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 63 1.6E-26 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Vc3S01_0027 4b0b3667637e86b2e67adcacf6c7ca59 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 217 1.8E-17 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Vc3S01_0027 4b0b3667637e86b2e67adcacf6c7ca59 223 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 112 1.4E-24 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Vc3S01_0027 4b0b3667637e86b2e67adcacf6c7ca59 223 Gene3D G3DSA:1.10.3720.10 1 222 6.6E-53 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_0027 4b0b3667637e86b2e67adcacf6c7ca59 223 SUPERFAMILY SSF161098 13 203 2.09E-43 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_1610 4c7fdcaf6ad06ffc1373de7dd8ec9394 467 SMART SM00283 205 466 1.2E-56 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Vc3S01_1610 4c7fdcaf6ad06ffc1373de7dd8ec9394 467 Gene3D G3DSA:1.10.287.950 139 466 3.0E-63 T 12-10-2018 Vc3S01_1610 4c7fdcaf6ad06ffc1373de7dd8ec9394 467 SUPERFAMILY SSF58104 157 466 4.84E-66 T 12-10-2018 Vc3S01_1610 4c7fdcaf6ad06ffc1373de7dd8ec9394 467 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 252 430 2.0E-38 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Vc3S01_1897 20fd3ba60b2be95a49d06e7f50c7d599 511 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 5 503 2.5E-213 T 12-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Vc3S01_1897 20fd3ba60b2be95a49d06e7f50c7d599 511 Gene3D G3DSA:1.20.200.10 198 509 1.6E-121 T 12-10-2018 Vc3S01_1897 20fd3ba60b2be95a49d06e7f50c7d599 511 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 3 504 44.218 T 12-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Vc3S01_1897 20fd3ba60b2be95a49d06e7f50c7d599 511 Pfam PF00221 Aromatic amino acid lyase 12 470 1.7E-187 T 12-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 Vc3S01_1897 20fd3ba60b2be95a49d06e7f50c7d599 511 SUPERFAMILY SSF48557 4 506 4.16E-191 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 Vc3S01_1897 20fd3ba60b2be95a49d06e7f50c7d599 511 Gene3D G3DSA:1.10.275.10 2 197 7.1E-70 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal Vc3S01_1897 20fd3ba60b2be95a49d06e7f50c7d599 511 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 139 155 - T 12-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 Vc3S01_A1050 4ac9b048ccb9b8c08e79b3a9b24b905c 434 SUPERFAMILY SSF53613 34 417 4.19E-47 T 12-10-2018 IPR029056 Ribokinase-like Vc3S01_A1050 4ac9b048ccb9b8c08e79b3a9b24b905c 434 Pfam PF00294 pfkB family carbohydrate kinase 138 300 5.5E-12 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB Vc3S01_0022 1c87754c9e686e6c2dfefe2245addb57 453 Pfam PF10396 GTP-binding protein TrmE N-terminus 5 119 3.5E-35 T 12-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 Vc3S01_0022 1c87754c9e686e6c2dfefe2245addb57 453 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 215 368 6.7E-21 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Vc3S01_0022 1c87754c9e686e6c2dfefe2245addb57 453 Pfam PF12631 MnmE helical domain 122 450 2.1E-61 T 12-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 Vc3S01_0022 1c87754c9e686e6c2dfefe2245addb57 453 SUPERFAMILY SSF116878 120 453 1.26E-52 T 12-10-2018 Vc3S01_0022 1c87754c9e686e6c2dfefe2245addb57 453 Gene3D G3DSA:1.20.120.430 121 453 3.0E-103 T 12-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 Vc3S01_0022 1c87754c9e686e6c2dfefe2245addb57 453 Pfam PF01926 50S ribosome-binding GTPase 217 306 1.1E-23 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Vc3S01_0022 1c87754c9e686e6c2dfefe2245addb57 453 SUPERFAMILY SSF52540 70 371 1.57E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0022 1c87754c9e686e6c2dfefe2245addb57 453 Gene3D G3DSA:3.30.1360.120 1 120 6.9E-39 T 12-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 Vc3S01_0022 1c87754c9e686e6c2dfefe2245addb57 453 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 10 453 5.7E-101 T 12-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 Vc3S01_0022 1c87754c9e686e6c2dfefe2245addb57 453 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 4 453 32.839 T 12-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 Vc3S01_0022 1c87754c9e686e6c2dfefe2245addb57 453 Gene3D G3DSA:3.40.50.300 216 381 3.0E-103 T 12-10-2018 Vc3S01_1873 a375434b0c451f727c552fb575335038 288 SUPERFAMILY SSF52499 1 245 3.92E-59 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Vc3S01_1873 a375434b0c451f727c552fb575335038 288 Pfam PF00550 Phosphopantetheine attachment site 222 280 1.4E-6 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain Vc3S01_1873 a375434b0c451f727c552fb575335038 288 PRINTS PR01398 Isochorismatase signature 63 80 3.1E-43 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 Vc3S01_1873 a375434b0c451f727c552fb575335038 288 PRINTS PR01398 Isochorismatase signature 2 14 3.1E-43 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 Vc3S01_1873 a375434b0c451f727c552fb575335038 288 PRINTS PR01398 Isochorismatase signature 183 200 3.1E-43 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 Vc3S01_1873 a375434b0c451f727c552fb575335038 288 PRINTS PR01398 Isochorismatase signature 109 131 3.1E-43 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 Vc3S01_1873 a375434b0c451f727c552fb575335038 288 PRINTS PR01398 Isochorismatase signature 80 99 3.1E-43 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 Vc3S01_1873 a375434b0c451f727c552fb575335038 288 PRINTS PR01398 Isochorismatase signature 165 183 3.1E-43 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 Vc3S01_1873 a375434b0c451f727c552fb575335038 288 Pfam PF00857 Isochorismatase family 32 192 4.3E-34 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 Vc3S01_1873 a375434b0c451f727c552fb575335038 288 SUPERFAMILY SSF47336 219 282 3.53E-8 T 12-10-2018 IPR036736 ACP-like superfamily Vc3S01_1873 a375434b0c451f727c552fb575335038 288 Gene3D G3DSA:1.10.1200.10 209 287 8.8E-19 T 12-10-2018 IPR036736 ACP-like superfamily Vc3S01_1873 a375434b0c451f727c552fb575335038 288 Gene3D G3DSA:3.40.50.850 1 208 1.8E-75 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Vc3S01_1873 a375434b0c451f727c552fb575335038 288 PIRSF PIRSF001111 1 288 3.7E-123 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 Vc3S01_0497 5243d3a83d27540674b47f2396589665 197 PIRSF PIRSF006806 3 192 3.3E-34 T 12-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase Vc3S01_0497 5243d3a83d27540674b47f2396589665 197 SUPERFAMILY SSF100950 5 195 1.3E-56 T 12-10-2018 IPR037171 NagB/RpiA transferase-like Vc3S01_0497 5243d3a83d27540674b47f2396589665 197 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 6 189 2.6E-43 T 12-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase Vc3S01_0497 5243d3a83d27540674b47f2396589665 197 Gene3D G3DSA:3.40.50.10420 2 196 8.3E-56 T 12-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily Vc3S01_0497 5243d3a83d27540674b47f2396589665 197 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 6 189 2.8E-51 T 12-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase Vc3S01_2075 ab7dc0b55c1e604f9f8bbb00c7b4f797 383 Pfam PF00155 Aminotransferase class I and II 42 372 1.4E-51 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Vc3S01_2075 ab7dc0b55c1e604f9f8bbb00c7b4f797 383 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 232 241 - T 12-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 Vc3S01_2075 ab7dc0b55c1e604f9f8bbb00c7b4f797 383 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 4 380 46.013 T 12-10-2018 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 Vc3S01_2075 ab7dc0b55c1e604f9f8bbb00c7b4f797 383 SUPERFAMILY SSF53383 4 379 2.5E-99 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Vc3S01_2075 ab7dc0b55c1e604f9f8bbb00c7b4f797 383 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 22 376 5.9E-136 T 12-10-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 Vc3S01_2075 ab7dc0b55c1e604f9f8bbb00c7b4f797 383 Gene3D G3DSA:3.40.640.10 58 283 7.1E-121 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Vc3S01_2075 ab7dc0b55c1e604f9f8bbb00c7b4f797 383 Gene3D G3DSA:3.90.1150.10 42 372 7.1E-121 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Vc3S01_0434 5ba57e819c9cdc204eed916a6ee80a98 334 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 157 330 2.9E-56 T 12-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 Vc3S01_0434 5ba57e819c9cdc204eed916a6ee80a98 334 Gene3D G3DSA:3.40.50.1370 151 319 1.0E-145 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Vc3S01_0434 5ba57e819c9cdc204eed916a6ee80a98 334 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 332 3.0E-133 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Vc3S01_0434 5ba57e819c9cdc204eed916a6ee80a98 334 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 6.4E-46 T 12-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 Vc3S01_0434 5ba57e819c9cdc204eed916a6ee80a98 334 Gene3D G3DSA:3.40.50.1370 5 329 1.0E-145 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Vc3S01_0434 5ba57e819c9cdc204eed916a6ee80a98 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 268 277 1.7E-25 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Vc3S01_0434 5ba57e819c9cdc204eed916a6ee80a98 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 297 320 1.7E-25 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Vc3S01_0434 5ba57e819c9cdc204eed916a6ee80a98 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 1.7E-25 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Vc3S01_0434 5ba57e819c9cdc204eed916a6ee80a98 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 1.7E-25 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Vc3S01_0434 5ba57e819c9cdc204eed916a6ee80a98 334 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Vc3S01_0434 5ba57e819c9cdc204eed916a6ee80a98 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 311 322 4.1E-32 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Vc3S01_0434 5ba57e819c9cdc204eed916a6ee80a98 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 4.1E-32 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Vc3S01_0434 5ba57e819c9cdc204eed916a6ee80a98 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 4.1E-32 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Vc3S01_0434 5ba57e819c9cdc204eed916a6ee80a98 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 4.1E-32 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Vc3S01_0434 5ba57e819c9cdc204eed916a6ee80a98 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 230 240 4.1E-32 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Vc3S01_0434 5ba57e819c9cdc204eed916a6ee80a98 334 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 333 83.28 T 12-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 Vc3S01_0434 5ba57e819c9cdc204eed916a6ee80a98 334 SUPERFAMILY SSF53671 4 333 1.44E-98 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Vc3S01_A1267 aa4b3d7c57699cd6ebc835186d2d62b4 326 Gene3D G3DSA:2.40.50.180 44 160 1.3E-29 T 12-10-2018 Vc3S01_A1267 aa4b3d7c57699cd6ebc835186d2d62b4 326 Pfam PF01584 CheW-like domain 35 162 5.1E-30 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Vc3S01_A1267 aa4b3d7c57699cd6ebc835186d2d62b4 326 Gene3D G3DSA:2.30.30.40 36 154 1.3E-29 T 12-10-2018 Vc3S01_A1267 aa4b3d7c57699cd6ebc835186d2d62b4 326 PIRSF PIRSF002867 1 324 2.6E-102 T 12-10-2018 IPR024181 Chemotaxis response regulator CheV Vc3S01_A1267 aa4b3d7c57699cd6ebc835186d2d62b4 326 SMART SM00448 193 318 4.7E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A1267 aa4b3d7c57699cd6ebc835186d2d62b4 326 SUPERFAMILY SSF50341 7 165 4.71E-33 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Vc3S01_A1267 aa4b3d7c57699cd6ebc835186d2d62b4 326 SMART SM00260 14 160 2.1E-25 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Vc3S01_A1267 aa4b3d7c57699cd6ebc835186d2d62b4 326 Pfam PF00072 Response regulator receiver domain 195 316 9.8E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A1267 aa4b3d7c57699cd6ebc835186d2d62b4 326 Gene3D G3DSA:3.40.50.2300 180 323 6.0E-29 T 12-10-2018 Vc3S01_A1267 aa4b3d7c57699cd6ebc835186d2d62b4 326 SUPERFAMILY SSF52172 193 320 1.85E-28 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_1719 fda1dd6322b21744ebc7f124e94731a9 106 Pfam PF13466 STAS domain 19 95 5.8E-10 T 12-10-2018 IPR002645 STAS domain Vc3S01_1719 fda1dd6322b21744ebc7f124e94731a9 106 Gene3D G3DSA:3.30.750.24 1 105 1.4E-17 T 12-10-2018 IPR036513 STAS domain superfamily Vc3S01_1719 fda1dd6322b21744ebc7f124e94731a9 106 SUPERFAMILY SSF52091 6 101 2.94E-20 T 12-10-2018 IPR036513 STAS domain superfamily Vc3S01_A0362 a9ffc2e424c44687be9b7c5fde36c729 258 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 15 254 6.3E-59 T 12-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 Vc3S01_A0362 a9ffc2e424c44687be9b7c5fde36c729 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 80 99 1.4E-23 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Vc3S01_A0362 a9ffc2e424c44687be9b7c5fde36c729 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 1.4E-23 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Vc3S01_A0362 a9ffc2e424c44687be9b7c5fde36c729 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 179 201 1.4E-23 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Vc3S01_A0362 a9ffc2e424c44687be9b7c5fde36c729 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 201 220 1.4E-23 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Vc3S01_A0362 a9ffc2e424c44687be9b7c5fde36c729 258 Pfam PF01311 Bacterial export proteins, family 1 14 243 1.7E-61 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Vc3S01_A1148 69f9e848a95aaf7f47c8f6bb912fb9ba 499 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 411 497 3.1E-6 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_A1148 69f9e848a95aaf7f47c8f6bb912fb9ba 499 Pfam PF05231 MASE1 16 276 4.3E-17 T 12-10-2018 IPR007895 MASE1 Vc3S01_A1148 69f9e848a95aaf7f47c8f6bb912fb9ba 499 Gene3D G3DSA:3.30.565.10 372 498 7.5E-25 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_A1148 69f9e848a95aaf7f47c8f6bb912fb9ba 499 SUPERFAMILY SSF55874 381 497 5.76E-15 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_A1148 69f9e848a95aaf7f47c8f6bb912fb9ba 499 Pfam PF07730 Histidine kinase 304 367 5.9E-11 T 12-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Vc3S01_A1148 69f9e848a95aaf7f47c8f6bb912fb9ba 499 SMART SM00387 407 499 1.1E-5 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_1590 6fdfae9633f462a79d82b8d97feae519 395 Gene3D G3DSA:3.10.310.10 183 373 1.4E-148 T 12-10-2018 Vc3S01_1590 6fdfae9633f462a79d82b8d97feae519 395 SUPERFAMILY SSF54506 6 184 1.73E-70 T 12-10-2018 Vc3S01_1590 6fdfae9633f462a79d82b8d97feae519 395 Gene3D G3DSA:3.10.310.10 13 386 1.4E-148 T 12-10-2018 Vc3S01_1590 6fdfae9633f462a79d82b8d97feae519 395 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 7 394 2.4E-230 T 12-10-2018 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 Vc3S01_1590 6fdfae9633f462a79d82b8d97feae519 395 Pfam PF04303 PrpF protein 8 389 3.5E-174 T 12-10-2018 IPR007400 PrpF protein Vc3S01_1590 6fdfae9633f462a79d82b8d97feae519 395 SUPERFAMILY SSF54506 188 393 7.38E-76 T 12-10-2018 Vc3S01_1919 79ef54e242aac5eb716a985a1119c4b4 562 Gene3D G3DSA:3.40.50.10380 13 265 2.4E-114 T 12-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 Vc3S01_1919 79ef54e242aac5eb716a985a1119c4b4 562 SUPERFAMILY SSF51735 268 559 4.73E-97 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_1919 79ef54e242aac5eb716a985a1119c4b4 562 SUPERFAMILY SSF53223 4 267 1.08E-109 T 12-10-2018 Vc3S01_1919 79ef54e242aac5eb716a985a1119c4b4 562 SMART SM01274 78 258 1.5E-107 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 Vc3S01_1919 79ef54e242aac5eb716a985a1119c4b4 562 SMART SM00919 268 528 1.2E-133 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 Vc3S01_1919 79ef54e242aac5eb716a985a1119c4b4 562 Pfam PF00390 Malic enzyme, N-terminal domain 78 258 8.3E-78 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 Vc3S01_1919 79ef54e242aac5eb716a985a1119c4b4 562 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 1 562 73.006 T 12-10-2018 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38|MetaCyc: PWY-6339 Vc3S01_1919 79ef54e242aac5eb716a985a1119c4b4 562 ProSitePatterns PS00331 Malic enzymes signature. 264 280 - T 12-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 Vc3S01_1919 79ef54e242aac5eb716a985a1119c4b4 562 PIRSF PIRSF000106 2 560 4.2E-226 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Vc3S01_1919 79ef54e242aac5eb716a985a1119c4b4 562 PRINTS PR00072 Malic enzyme signature 144 173 1.3E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Vc3S01_1919 79ef54e242aac5eb716a985a1119c4b4 562 PRINTS PR00072 Malic enzyme signature 180 202 1.3E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Vc3S01_1919 79ef54e242aac5eb716a985a1119c4b4 562 PRINTS PR00072 Malic enzyme signature 405 421 1.3E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Vc3S01_1919 79ef54e242aac5eb716a985a1119c4b4 562 PRINTS PR00072 Malic enzyme signature 264 280 1.3E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Vc3S01_1919 79ef54e242aac5eb716a985a1119c4b4 562 PRINTS PR00072 Malic enzyme signature 84 108 1.3E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Vc3S01_1919 79ef54e242aac5eb716a985a1119c4b4 562 PRINTS PR00072 Malic enzyme signature 295 311 1.3E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Vc3S01_1919 79ef54e242aac5eb716a985a1119c4b4 562 PRINTS PR00072 Malic enzyme signature 239 257 1.3E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Vc3S01_1919 79ef54e242aac5eb716a985a1119c4b4 562 Pfam PF03949 Malic enzyme, NAD binding domain 268 528 4.8E-103 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 Vc3S01_1919 79ef54e242aac5eb716a985a1119c4b4 562 Gene3D G3DSA:3.40.50.720 266 562 2.5E-110 T 12-10-2018 Vc3S01_A1640 58295ea3f6ab4e48a2fbb70f224c43c2 230 SUPERFAMILY SSF49354 16 156 1.54E-9 T 12-10-2018 IPR008962 PapD-like superfamily Vc3S01_3113 b1cbfdc9a389b5981103ad2fb4fde848 259 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 3 256 38.803 T 12-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 Vc3S01_3113 b1cbfdc9a389b5981103ad2fb4fde848 259 Gene3D G3DSA:3.40.50.150 57 259 4.6E-75 T 12-10-2018 Vc3S01_3113 b1cbfdc9a389b5981103ad2fb4fde848 259 SUPERFAMILY SSF53335 4 255 4.07E-75 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Vc3S01_3113 b1cbfdc9a389b5981103ad2fb4fde848 259 Gene3D G3DSA:3.40.1630.10 1 56 4.9E-21 T 12-10-2018 Vc3S01_3113 b1cbfdc9a389b5981103ad2fb4fde848 259 Pfam PF04445 Putative SAM-dependent methyltransferase 19 255 2.8E-106 T 12-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 Vc3S01_1722 8da728323f7f610db53950af886e7a1b 229 Gene3D G3DSA:3.40.50.300 4 197 1.9E-22 T 12-10-2018 Vc3S01_1722 8da728323f7f610db53950af886e7a1b 229 Pfam PF13500 AAA domain 24 209 1.3E-6 T 12-10-2018 Vc3S01_1722 8da728323f7f610db53950af886e7a1b 229 SUPERFAMILY SSF52540 24 199 1.54E-16 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0654 47ccca79d83381fa43a4f7190e914f18 239 Gene3D G3DSA:3.40.50.1580 1 238 4.5E-76 T 12-10-2018 Vc3S01_0654 47ccca79d83381fa43a4f7190e914f18 239 Pfam PF01048 Phosphorylase superfamily 15 217 8.2E-41 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 Vc3S01_0654 47ccca79d83381fa43a4f7190e914f18 239 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 12-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 Vc3S01_0654 47ccca79d83381fa43a4f7190e914f18 239 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 234 1.1E-118 T 12-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 Vc3S01_0654 47ccca79d83381fa43a4f7190e914f18 239 SUPERFAMILY SSF53167 3 234 2.62E-92 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 Vc3S01_0654 47ccca79d83381fa43a4f7190e914f18 239 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 51.523 T 12-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 Vc3S01_A1516 6931bbb75a97372af6c2061e1047502c 172 Gene3D G3DSA:1.20.120.330 1 168 3.9E-49 T 12-10-2018 Vc3S01_A1516 6931bbb75a97372af6c2061e1047502c 172 Pfam PF05068 Mannitol repressor 4 166 2.7E-50 T 12-10-2018 IPR007761 Mannitol repressor MtlR-like Vc3S01_A1516 6931bbb75a97372af6c2061e1047502c 172 SUPERFAMILY SSF158668 3 166 1.29E-50 T 12-10-2018 IPR038026 MtlR-like superfamily Vc3S01_0223 a9c181f314d6db0ab854b83e38b3a0d9 340 Gene3D G3DSA:3.20.20.70 51 334 5.4E-90 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_0223 a9c181f314d6db0ab854b83e38b3a0d9 340 Pfam PF04055 Radical SAM superfamily 117 280 6.8E-9 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Vc3S01_0223 a9c181f314d6db0ab854b83e38b3a0d9 340 TIGRFAM TIGR00238 TIGR00238: KamA family protein 11 328 7.4E-127 T 12-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase Vc3S01_0223 a9c181f314d6db0ab854b83e38b3a0d9 340 PIRSF PIRSF004911 3 340 8.6E-116 T 12-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase Vc3S01_0223 a9c181f314d6db0ab854b83e38b3a0d9 340 Pfam PF13353 4Fe-4S single cluster domain 115 183 4.6E-7 T 12-10-2018 Vc3S01_0223 a9c181f314d6db0ab854b83e38b3a0d9 340 SUPERFAMILY SSF102114 102 324 1.23E-24 T 12-10-2018 Vc3S01_0223 a9c181f314d6db0ab854b83e38b3a0d9 340 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 16 335 2.9E-153 T 12-10-2018 IPR022462 Lysine-2,3-aminomutase-like Vc3S01_A0859 47eb6092e58aa3342002c6d3948795c1 718 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 590 669 8.9E-5 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A0859 47eb6092e58aa3342002c6d3948795c1 718 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 123 196 3.1E-10 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A0859 47eb6092e58aa3342002c6d3948795c1 718 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 211 286 5.4E-13 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A0859 47eb6092e58aa3342002c6d3948795c1 718 SUPERFAMILY SSF46626 590 700 9.74E-15 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Vc3S01_A0859 47eb6092e58aa3342002c6d3948795c1 718 SUPERFAMILY SSF46626 211 289 3.92E-18 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Vc3S01_A0859 47eb6092e58aa3342002c6d3948795c1 718 Pfam PF00034 Cytochrome c 306 403 8.6E-7 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A0859 47eb6092e58aa3342002c6d3948795c1 718 Gene3D G3DSA:1.10.760.10 582 697 9.5E-22 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Vc3S01_A0859 47eb6092e58aa3342002c6d3948795c1 718 SUPERFAMILY SSF46626 459 565 1.08E-10 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Vc3S01_A0859 47eb6092e58aa3342002c6d3948795c1 718 Gene3D G3DSA:1.10.760.10 102 287 5.0E-54 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Vc3S01_A0859 47eb6092e58aa3342002c6d3948795c1 718 SUPERFAMILY SSF46626 301 423 7.82E-19 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Vc3S01_A0859 47eb6092e58aa3342002c6d3948795c1 718 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 42 81 5.5E-7 T 12-10-2018 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal Vc3S01_A0859 47eb6092e58aa3342002c6d3948795c1 718 Gene3D G3DSA:1.10.760.10 177 266 5.0E-54 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Vc3S01_A0859 47eb6092e58aa3342002c6d3948795c1 718 Gene3D G3DSA:1.20.58.1490 1 91 2.0E-18 T 12-10-2018 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily Vc3S01_A0859 47eb6092e58aa3342002c6d3948795c1 718 Gene3D G3DSA:1.10.760.10 290 414 4.8E-10 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Vc3S01_A0859 47eb6092e58aa3342002c6d3948795c1 718 SUPERFAMILY SSF46626 54 201 2.54E-25 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Vc3S01_2693 1bb2bff4a4c5363eddf5773f0b994fe7 333 Pfam PF01551 Peptidase family M23 174 269 7.3E-29 T 12-10-2018 IPR016047 Peptidase M23 Vc3S01_2693 1bb2bff4a4c5363eddf5773f0b994fe7 333 SUPERFAMILY SSF51261 84 271 2.75E-51 T 12-10-2018 IPR011055 Duplicated hybrid motif Vc3S01_2693 1bb2bff4a4c5363eddf5773f0b994fe7 333 Gene3D G3DSA:2.70.70.10 121 275 3.7E-41 T 12-10-2018 IPR011055 Duplicated hybrid motif Vc3S01_A1615 38f6e7fe23d653c4e31d293ebaab9e37 134 SUPERFAMILY SSF54913 1 66 2.2E-10 T 12-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Vc3S01_A1615 38f6e7fe23d653c4e31d293ebaab9e37 134 Pfam PF09413 Putative prokaryotic signal transducing protein 1 65 1.9E-13 T 12-10-2018 IPR018551 Domain of unknown function DUF2007 Vc3S01_1117 1cbdd83cbaacb4afe73b263c6a821cf9 313 Gene3D G3DSA:2.40.50.180 39 158 5.2E-27 T 12-10-2018 Vc3S01_1117 1cbdd83cbaacb4afe73b263c6a821cf9 313 SUPERFAMILY SSF50341 16 163 1.03E-32 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Vc3S01_1117 1cbdd83cbaacb4afe73b263c6a821cf9 313 Pfam PF00072 Response regulator receiver domain 186 303 1.3E-13 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_1117 1cbdd83cbaacb4afe73b263c6a821cf9 313 PIRSF PIRSF002867 1 313 1.2E-105 T 12-10-2018 IPR024181 Chemotaxis response regulator CheV Vc3S01_1117 1cbdd83cbaacb4afe73b263c6a821cf9 313 Pfam PF01584 CheW-like domain 21 160 2.2E-33 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Vc3S01_1117 1cbdd83cbaacb4afe73b263c6a821cf9 313 SUPERFAMILY SSF52172 183 310 1.05E-20 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_1117 1cbdd83cbaacb4afe73b263c6a821cf9 313 SMART SM00260 17 158 2.7E-25 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Vc3S01_1117 1cbdd83cbaacb4afe73b263c6a821cf9 313 Gene3D G3DSA:3.40.50.2300 183 311 1.5E-20 T 12-10-2018 Vc3S01_1117 1cbdd83cbaacb4afe73b263c6a821cf9 313 SMART SM00448 184 305 1.3E-11 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_1117 1cbdd83cbaacb4afe73b263c6a821cf9 313 Gene3D G3DSA:2.30.30.40 24 152 5.2E-27 T 12-10-2018 Vc3S01_0383 3c4f46fc63f838492095c4358a4f6b7f 544 SMART SM00965 93 141 1.9E-6 T 12-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 Vc3S01_0383 3c4f46fc63f838492095c4358a4f6b7f 544 PRINTS PR00811 Bacterial general secretion pathway protein D signature 485 503 6.1E-17 T 12-10-2018 IPR001775 GspD/PilQ family Vc3S01_0383 3c4f46fc63f838492095c4358a4f6b7f 544 PRINTS PR00811 Bacterial general secretion pathway protein D signature 508 522 6.1E-17 T 12-10-2018 IPR001775 GspD/PilQ family Vc3S01_0383 3c4f46fc63f838492095c4358a4f6b7f 544 PRINTS PR00811 Bacterial general secretion pathway protein D signature 338 362 6.1E-17 T 12-10-2018 IPR001775 GspD/PilQ family Vc3S01_0383 3c4f46fc63f838492095c4358a4f6b7f 544 PRINTS PR00811 Bacterial general secretion pathway protein D signature 270 280 6.1E-17 T 12-10-2018 IPR001775 GspD/PilQ family Vc3S01_0383 3c4f46fc63f838492095c4358a4f6b7f 544 Pfam PF07655 Secretin N-terminal domain 145 241 3.2E-25 T 12-10-2018 IPR011514 Secretin, N-terminal GO:0009297|GO:0019867 Vc3S01_0383 3c4f46fc63f838492095c4358a4f6b7f 544 Pfam PF00263 Bacterial type II and III secretion system protein 343 520 1.5E-39 T 12-10-2018 IPR004846 Type II/III secretion system GO:0009306 Vc3S01_0383 3c4f46fc63f838492095c4358a4f6b7f 544 TIGRFAM TIGR02519 pilus_MshL: pilus (MSHA type) biogenesis protein MshL 236 520 8.3E-89 T 12-10-2018 IPR013358 Pilus biogenesis, MshL Vc3S01_0383 3c4f46fc63f838492095c4358a4f6b7f 544 Gene3D G3DSA:3.55.50.30 49 146 1.3E-10 T 12-10-2018 Vc3S01_1771 478db57420607f831bb0b91a4119a10a 978 SUPERFAMILY SSF55486 262 324 6.33E-5 T 12-10-2018 Vc3S01_1771 478db57420607f831bb0b91a4119a10a 978 Gene3D G3DSA:2.10.10.20 932 977 2.5E-15 T 12-10-2018 Vc3S01_1771 478db57420607f831bb0b91a4119a10a 978 SUPERFAMILY SSF51055 880 929 7.59E-13 T 12-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 Vc3S01_1771 478db57420607f831bb0b91a4119a10a 978 Gene3D G3DSA:2.10.10.20 884 931 1.5E-11 T 12-10-2018 Vc3S01_1771 478db57420607f831bb0b91a4119a10a 978 Gene3D G3DSA:2.60.120.1230 435 547 6.2E-20 T 12-10-2018 Vc3S01_1771 478db57420607f831bb0b91a4119a10a 978 SUPERFAMILY SSF51055 932 974 4.58E-12 T 12-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 Vc3S01_1771 478db57420607f831bb0b91a4119a10a 978 Pfam PF10462 Peptidase M66 115 413 1.5E-72 T 12-10-2018 IPR019503 Peptidase M66 domain GO:0004222 Vc3S01_1771 478db57420607f831bb0b91a4119a10a 978 SMART SM00089 688 777 1.4 T 12-10-2018 IPR022409 PKD/Chitinase domain Vc3S01_1771 478db57420607f831bb0b91a4119a10a 978 SMART SM00089 786 871 0.069 T 12-10-2018 IPR022409 PKD/Chitinase domain Vc3S01_1771 478db57420607f831bb0b91a4119a10a 978 Gene3D G3DSA:2.60.40.10 685 780 6.9E-17 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_1771 478db57420607f831bb0b91a4119a10a 978 SMART SM00495 885 927 8.6E-14 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 Vc3S01_1771 478db57420607f831bb0b91a4119a10a 978 SMART SM00495 931 973 2.9E-13 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 Vc3S01_1771 478db57420607f831bb0b91a4119a10a 978 Pfam PF02839 Carbohydrate binding domain 948 970 4.7E-6 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 Vc3S01_1771 478db57420607f831bb0b91a4119a10a 978 Gene3D G3DSA:2.60.40.10 781 883 9.0E-9 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_1865 37357afcaa12e97c2d4bebb85fb98c00 1042 SUPERFAMILY SSF56801 433 979 3.4E-138 T 12-10-2018 Vc3S01_1865 37357afcaa12e97c2d4bebb85fb98c00 1042 Gene3D G3DSA:1.10.1200.10 963 1030 1.1E-11 T 12-10-2018 IPR036736 ACP-like superfamily Vc3S01_1865 37357afcaa12e97c2d4bebb85fb98c00 1042 SUPERFAMILY SSF52777 198 420 2.11E-16 T 12-10-2018 Vc3S01_1865 37357afcaa12e97c2d4bebb85fb98c00 1042 SUPERFAMILY SSF52777 10 167 2.0E-9 T 12-10-2018 Vc3S01_1865 37357afcaa12e97c2d4bebb85fb98c00 1042 Gene3D G3DSA:3.30.559.10 10 178 4.1E-13 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Vc3S01_1865 37357afcaa12e97c2d4bebb85fb98c00 1042 Gene3D G3DSA:3.30.559.30 194 425 4.5E-28 T 12-10-2018 Vc3S01_1865 37357afcaa12e97c2d4bebb85fb98c00 1042 Pfam PF00668 Condensation domain 14 416 2.9E-7 T 12-10-2018 IPR001242 Condensation domain Vc3S01_1865 37357afcaa12e97c2d4bebb85fb98c00 1042 Pfam PF13193 AMP-binding enzyme C-terminal domain 861 938 3.9E-12 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Vc3S01_1865 37357afcaa12e97c2d4bebb85fb98c00 1042 Gene3D G3DSA:3.30.300.30 847 956 1.6E-31 T 12-10-2018 Vc3S01_1865 37357afcaa12e97c2d4bebb85fb98c00 1042 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 479 877 2.9E-117 T 12-10-2018 IPR010071 Amino acid adenylation domain Vc3S01_1865 37357afcaa12e97c2d4bebb85fb98c00 1042 ProSitePatterns PS00455 Putative AMP-binding domain signature. 596 607 - T 12-10-2018 IPR020845 AMP-binding, conserved site Vc3S01_1865 37357afcaa12e97c2d4bebb85fb98c00 1042 Gene3D G3DSA:3.40.50.12780 448 846 1.5E-110 T 12-10-2018 Vc3S01_1865 37357afcaa12e97c2d4bebb85fb98c00 1042 SUPERFAMILY SSF47336 964 1028 9.0E-10 T 12-10-2018 IPR036736 ACP-like superfamily Vc3S01_1865 37357afcaa12e97c2d4bebb85fb98c00 1042 Pfam PF00501 AMP-binding enzyme 457 852 3.1E-96 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Vc3S01_A0345 a6e8a06beb0df5707eff2e840159c5e8 344 Pfam PF12833 Helix-turn-helix domain 258 333 3.0E-18 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_A0345 a6e8a06beb0df5707eff2e840159c5e8 344 SUPERFAMILY SSF46689 287 333 8.06E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_A0345 a6e8a06beb0df5707eff2e840159c5e8 344 Gene3D G3DSA:1.10.10.60 233 340 9.9E-24 T 12-10-2018 Vc3S01_A0345 a6e8a06beb0df5707eff2e840159c5e8 344 SMART SM00342 250 332 8.9E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_A0345 a6e8a06beb0df5707eff2e840159c5e8 344 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 316 332 2.5E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Vc3S01_A0345 a6e8a06beb0df5707eff2e840159c5e8 344 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 301 316 2.5E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Vc3S01_A0242 58b2ac2e5b9b12e44cc8df780f55b0d0 375 Pfam PF13729 F plasmid transfer operon, TraF, protein 47 292 8.4E-63 T 12-10-2018 IPR032811 Putative conjugal transfer protein TraF-related Vc3S01_2663 888877152b37e25b016d84c038e738b7 232 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 10 219 3.6E-75 T 12-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 Vc3S01_2663 888877152b37e25b016d84c038e738b7 232 Gene3D G3DSA:1.20.58.220 2 117 5.7E-41 T 12-10-2018 IPR038078 PhoU-like domain superfamily Vc3S01_2663 888877152b37e25b016d84c038e738b7 232 SUPERFAMILY SSF109755 10 225 7.74E-70 T 12-10-2018 Vc3S01_2663 888877152b37e25b016d84c038e738b7 232 Gene3D G3DSA:1.20.58.220 118 230 3.3E-34 T 12-10-2018 IPR038078 PhoU-like domain superfamily Vc3S01_2663 888877152b37e25b016d84c038e738b7 232 Pfam PF01895 PhoU domain 23 108 3.2E-23 T 12-10-2018 IPR026022 PhoU domain Vc3S01_2663 888877152b37e25b016d84c038e738b7 232 Pfam PF01895 PhoU domain 128 210 2.1E-16 T 12-10-2018 IPR026022 PhoU domain Vc3S01_2663 888877152b37e25b016d84c038e738b7 232 PIRSF PIRSF003107 4 223 2.7E-70 T 12-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 Vc3S01_A0741 09941e3c0a4ad9947565de6d923bce98 210 ProSitePatterns PS00622 LuxR-type HTH domain signature. 162 189 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_A0741 09941e3c0a4ad9947565de6d923bce98 210 SMART SM00448 4 117 1.6E-31 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A0741 09941e3c0a4ad9947565de6d923bce98 210 SUPERFAMILY SSF46894 131 204 2.62E-20 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Vc3S01_A0741 09941e3c0a4ad9947565de6d923bce98 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 3.0E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_A0741 09941e3c0a4ad9947565de6d923bce98 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 3.0E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_A0741 09941e3c0a4ad9947565de6d923bce98 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 3.0E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_A0741 09941e3c0a4ad9947565de6d923bce98 210 SMART SM00421 145 202 1.8E-22 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_A0741 09941e3c0a4ad9947565de6d923bce98 210 SUPERFAMILY SSF52172 5 134 1.99E-33 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_A0741 09941e3c0a4ad9947565de6d923bce98 210 Gene3D G3DSA:3.40.50.12740 4 205 8.2E-65 T 12-10-2018 Vc3S01_A0741 09941e3c0a4ad9947565de6d923bce98 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 201 3.7E-22 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_A0741 09941e3c0a4ad9947565de6d923bce98 210 Pfam PF00072 Response regulator receiver domain 6 117 3.7E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A1574 0bf95df4cf1f070b8f22c51b13a24c2b 252 Pfam PF00005 ABC transporter 29 170 1.6E-14 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_A1574 0bf95df4cf1f070b8f22c51b13a24c2b 252 SMART SM00382 28 215 1.4E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_A1574 0bf95df4cf1f070b8f22c51b13a24c2b 252 Gene3D G3DSA:3.40.50.300 1 251 8.5E-40 T 12-10-2018 Vc3S01_A1574 0bf95df4cf1f070b8f22c51b13a24c2b 252 SUPERFAMILY SSF52540 3 231 8.11E-32 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2774 cd586e359b7fd19f533dc6d4a448bd04 420 SUPERFAMILY SSF53067 198 384 2.13E-45 T 12-10-2018 Vc3S01_2774 cd586e359b7fd19f533dc6d4a448bd04 420 SMART SM00842 10 196 6.8E-95 T 12-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 Vc3S01_2774 cd586e359b7fd19f533dc6d4a448bd04 420 SUPERFAMILY SSF53067 8 221 1.06E-59 T 12-10-2018 Vc3S01_2774 cd586e359b7fd19f533dc6d4a448bd04 420 Gene3D G3DSA:3.30.420.40 13 379 1.1E-110 T 12-10-2018 Vc3S01_2774 cd586e359b7fd19f533dc6d4a448bd04 420 Pfam PF02491 SHS2 domain inserted in FTSA 85 161 2.5E-28 T 12-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 Vc3S01_2774 cd586e359b7fd19f533dc6d4a448bd04 420 PIRSF PIRSF003101 1 420 5.9E-146 T 12-10-2018 IPR020823 Cell division protein FtsA Vc3S01_2774 cd586e359b7fd19f533dc6d4a448bd04 420 Pfam PF14450 Cell division protein FtsA 207 381 6.7E-24 T 12-10-2018 Vc3S01_2774 cd586e359b7fd19f533dc6d4a448bd04 420 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 420 29.167 T 12-10-2018 IPR020823 Cell division protein FtsA Vc3S01_2774 cd586e359b7fd19f533dc6d4a448bd04 420 Gene3D G3DSA:3.30.420.40 197 359 1.1E-110 T 12-10-2018 Vc3S01_2774 cd586e359b7fd19f533dc6d4a448bd04 420 Gene3D G3DSA:3.30.1490.110 87 169 1.1E-110 T 12-10-2018 Vc3S01_2774 cd586e359b7fd19f533dc6d4a448bd04 420 Gene3D G3DSA:3.90.640.10 235 300 1.1E-110 T 12-10-2018 Vc3S01_2774 cd586e359b7fd19f533dc6d4a448bd04 420 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 385 1.1E-150 T 12-10-2018 IPR020823 Cell division protein FtsA Vc3S01_0797 de321ec2c5582ea15be21c4e8614401d 448 SMART SM00977 375 444 2.1E-23 T 12-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Vc3S01_0797 de321ec2c5582ea15be21c4e8614401d 448 Pfam PF11734 TilS substrate C-terminal domain 375 445 8.3E-25 T 12-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Vc3S01_0797 de321ec2c5582ea15be21c4e8614401d 448 SUPERFAMILY SSF52402 14 243 1.21E-59 T 12-10-2018 Vc3S01_0797 de321ec2c5582ea15be21c4e8614401d 448 Pfam PF01171 PP-loop family 21 209 2.3E-54 T 12-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 Vc3S01_0797 de321ec2c5582ea15be21c4e8614401d 448 SUPERFAMILY SSF56037 333 446 7.59E-28 T 12-10-2018 Vc3S01_0797 de321ec2c5582ea15be21c4e8614401d 448 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 21 213 3.9E-51 T 12-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Vc3S01_0797 de321ec2c5582ea15be21c4e8614401d 448 SUPERFAMILY SSF82829 245 329 2.09E-24 T 12-10-2018 Vc3S01_0797 de321ec2c5582ea15be21c4e8614401d 448 Pfam PF09179 TilS substrate binding domain 258 325 8.7E-19 T 12-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Vc3S01_0797 de321ec2c5582ea15be21c4e8614401d 448 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 375 421 3.2E-16 T 12-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Vc3S01_0797 de321ec2c5582ea15be21c4e8614401d 448 Gene3D G3DSA:1.20.59.20 244 329 1.3E-26 T 12-10-2018 Vc3S01_0797 de321ec2c5582ea15be21c4e8614401d 448 Gene3D G3DSA:3.40.50.620 12 243 4.2E-70 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Vc3S01_0797 de321ec2c5582ea15be21c4e8614401d 448 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 8 319 23.305 T 12-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Vc3S01_A0366 84f39806a78e03b2dc6b88144823617c 272 SUPERFAMILY SSF101801 198 262 3.14E-9 T 12-10-2018 IPR036429 SpoA-like superfamily Vc3S01_A0366 84f39806a78e03b2dc6b88144823617c 272 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 200 261 1.4E-10 T 12-10-2018 IPR001543 Surface presentation of antigen (SpoA) Vc3S01_0508 4168a0a5653f888219be7f9bccb2da67 192 SUPERFAMILY SSF88659 124 185 1.35E-17 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Vc3S01_0508 4168a0a5653f888219be7f9bccb2da67 192 Gene3D G3DSA:1.10.1740.10 1 121 7.7E-46 T 12-10-2018 Vc3S01_0508 4168a0a5653f888219be7f9bccb2da67 192 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 2 190 5.0E-103 T 12-10-2018 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Vc3S01_0508 4168a0a5653f888219be7f9bccb2da67 192 Pfam PF04542 Sigma-70 region 2 25 92 3.3E-18 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Vc3S01_0508 4168a0a5653f888219be7f9bccb2da67 192 SUPERFAMILY SSF88946 2 108 1.44E-32 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Vc3S01_0508 4168a0a5653f888219be7f9bccb2da67 192 Pfam PF08281 Sigma-70, region 4 134 181 4.2E-18 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Vc3S01_0508 4168a0a5653f888219be7f9bccb2da67 192 Gene3D G3DSA:1.10.10.10 122 192 1.7E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_0508 4168a0a5653f888219be7f9bccb2da67 192 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 185 6.5E-33 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Vc3S01_0508 4168a0a5653f888219be7f9bccb2da67 192 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 47 78 - T 12-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Vc3S01_0604 a80b93f2a84fbb646041a6c7bdf13a15 560 SUPERFAMILY SSF53850 42 544 2.35E-107 T 12-10-2018 Vc3S01_0604 a80b93f2a84fbb646041a6c7bdf13a15 560 Gene3D G3DSA:3.40.190.10 46 543 4.6E-196 T 12-10-2018 Vc3S01_0604 a80b93f2a84fbb646041a6c7bdf13a15 560 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 79 456 1.1E-75 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain Vc3S01_0604 a80b93f2a84fbb646041a6c7bdf13a15 560 PIRSF PIRSF002741 5 542 5.0E-67 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Vc3S01_0604 a80b93f2a84fbb646041a6c7bdf13a15 560 Gene3D G3DSA:3.90.76.10 66 172 4.6E-196 T 12-10-2018 Vc3S01_0604 a80b93f2a84fbb646041a6c7bdf13a15 560 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 84 106 - T 12-10-2018 IPR023765 Solute-binding protein family 5, conserved site Vc3S01_0604 a80b93f2a84fbb646041a6c7bdf13a15 560 Gene3D G3DSA:3.10.105.10 272 519 4.6E-196 T 12-10-2018 Vc3S01_A0278 270c9029f39ad58cce753028216d5872 224 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 97 189 4.2E-16 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Vc3S01_A0278 270c9029f39ad58cce753028216d5872 224 Gene3D G3DSA:3.40.50.1000 5 218 6.1E-64 T 12-10-2018 IPR023214 HAD superfamily Vc3S01_A0278 270c9029f39ad58cce753028216d5872 224 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 68 195 2.2E-8 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Vc3S01_A0278 270c9029f39ad58cce753028216d5872 224 Gene3D G3DSA:1.10.150.240 16 95 6.1E-64 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Vc3S01_A0278 270c9029f39ad58cce753028216d5872 224 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 194 9.6E-23 T 12-10-2018 Vc3S01_A0278 270c9029f39ad58cce753028216d5872 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 184 197 7.4E-8 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Vc3S01_A0278 270c9029f39ad58cce753028216d5872 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 7.4E-8 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Vc3S01_A0278 270c9029f39ad58cce753028216d5872 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 7.4E-8 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Vc3S01_A0278 270c9029f39ad58cce753028216d5872 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 137 153 7.4E-8 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Vc3S01_A0278 270c9029f39ad58cce753028216d5872 224 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 3 222 4.0E-87 T 12-10-2018 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 Vc3S01_A0278 270c9029f39ad58cce753028216d5872 224 SUPERFAMILY SSF56784 2 222 5.51E-49 T 12-10-2018 IPR036412 HAD-like superfamily Vc3S01_A0304 ddf024db1d0e93a7daa16fb04eeb7417 296 Gene3D G3DSA:3.40.190.10 168 259 1.8E-12 T 12-10-2018 Vc3S01_A0304 ddf024db1d0e93a7daa16fb04eeb7417 296 Gene3D G3DSA:1.10.10.10 1 85 3.9E-13 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A0304 ddf024db1d0e93a7daa16fb04eeb7417 296 SUPERFAMILY SSF46785 3 82 6.62E-10 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A0304 ddf024db1d0e93a7daa16fb04eeb7417 296 SUPERFAMILY SSF53850 87 287 3.62E-14 T 12-10-2018 Vc3S01_A0304 ddf024db1d0e93a7daa16fb04eeb7417 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 63 1.5E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A0304 ddf024db1d0e93a7daa16fb04eeb7417 296 Gene3D G3DSA:3.40.190.10 87 284 1.8E-12 T 12-10-2018 Vc3S01_0755 f2843d582a351d9c927fedaddfbeaaf0 404 Pfam PF00072 Response regulator receiver domain 5 104 5.3E-11 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_0755 f2843d582a351d9c927fedaddfbeaaf0 404 Pfam PF00072 Response regulator receiver domain 127 235 3.1E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_0755 f2843d582a351d9c927fedaddfbeaaf0 404 SUPERFAMILY SSF55073 260 402 8.63E-34 T 12-10-2018 IPR029787 Nucleotide cyclase Vc3S01_0755 f2843d582a351d9c927fedaddfbeaaf0 404 Gene3D G3DSA:3.30.70.270 253 404 2.7E-38 T 12-10-2018 Vc3S01_0755 f2843d582a351d9c927fedaddfbeaaf0 404 SUPERFAMILY SSF52172 125 259 3.84E-32 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_0755 f2843d582a351d9c927fedaddfbeaaf0 404 Pfam PF00990 Diguanylate cyclase, GGDEF domain 255 400 1.7E-30 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_0755 f2843d582a351d9c927fedaddfbeaaf0 404 Gene3D G3DSA:3.40.50.2300 120 252 8.9E-31 T 12-10-2018 Vc3S01_0755 f2843d582a351d9c927fedaddfbeaaf0 404 SMART SM00448 124 238 6.0E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_0755 f2843d582a351d9c927fedaddfbeaaf0 404 SMART SM00448 3 115 4.5E-10 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_0755 f2843d582a351d9c927fedaddfbeaaf0 404 SUPERFAMILY SSF52172 4 121 1.57E-18 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_0755 f2843d582a351d9c927fedaddfbeaaf0 404 Gene3D G3DSA:3.40.50.2300 1 119 1.1E-16 T 12-10-2018 Vc3S01_0755 f2843d582a351d9c927fedaddfbeaaf0 404 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 253 402 7.9E-38 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_0755 f2843d582a351d9c927fedaddfbeaaf0 404 SMART SM00267 244 404 1.5E-37 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_0942 8203a13487dd1dd72e12634e751cdfae 525 Gene3D G3DSA:1.10.1200.140 388 438 5.8E-29 T 12-10-2018 Vc3S01_0942 8203a13487dd1dd72e12634e751cdfae 525 SUPERFAMILY SSF53649 8 504 8.24E-114 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Vc3S01_0942 8203a13487dd1dd72e12634e751cdfae 525 ProSitePatterns PS00123 Alkaline phosphatase active site. 85 93 - T 12-10-2018 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 Vc3S01_0942 8203a13487dd1dd72e12634e751cdfae 525 Gene3D G3DSA:3.30.40.70 439 463 4.6E-20 T 12-10-2018 Vc3S01_0942 8203a13487dd1dd72e12634e751cdfae 525 SMART SM00098 27 422 5.7E-55 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 Vc3S01_0942 8203a13487dd1dd72e12634e751cdfae 525 Gene3D G3DSA:3.40.720.10 464 525 1.5E-6 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Vc3S01_0942 8203a13487dd1dd72e12634e751cdfae 525 Gene3D G3DSA:3.40.720.10 24 377 4.6E-140 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Vc3S01_0942 8203a13487dd1dd72e12634e751cdfae 525 Pfam PF00245 Alkaline phosphatase 26 501 1.9E-84 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 Vc3S01_0942 8203a13487dd1dd72e12634e751cdfae 525 PRINTS PR00113 Alkaline phosphatase signature 166 176 1.9E-37 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 Vc3S01_0942 8203a13487dd1dd72e12634e751cdfae 525 PRINTS PR00113 Alkaline phosphatase signature 26 46 1.9E-37 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 Vc3S01_0942 8203a13487dd1dd72e12634e751cdfae 525 PRINTS PR00113 Alkaline phosphatase signature 267 296 1.9E-37 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 Vc3S01_0942 8203a13487dd1dd72e12634e751cdfae 525 PRINTS PR00113 Alkaline phosphatase signature 122 142 1.9E-37 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 Vc3S01_0942 8203a13487dd1dd72e12634e751cdfae 525 PRINTS PR00113 Alkaline phosphatase signature 85 100 1.9E-37 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 Vc3S01_p20203 5f44ab815a464b201a28d34dff77def2 107 SUPERFAMILY SSF46689 34 103 2.24E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_p20203 5f44ab815a464b201a28d34dff77def2 107 Gene3D G3DSA:1.10.10.60 58 106 4.8E-6 T 12-10-2018 Vc3S01_p20203 5f44ab815a464b201a28d34dff77def2 107 Pfam PF08765 Mor transcription activator family 27 104 3.3E-8 T 12-10-2018 IPR014875 Mor transcription activator Vc3S01_A0629 5f44ab815a464b201a28d34dff77def2 107 SUPERFAMILY SSF46689 34 103 2.24E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_A0629 5f44ab815a464b201a28d34dff77def2 107 Gene3D G3DSA:1.10.10.60 58 106 4.8E-6 T 12-10-2018 Vc3S01_A0629 5f44ab815a464b201a28d34dff77def2 107 Pfam PF08765 Mor transcription activator family 27 104 3.3E-8 T 12-10-2018 IPR014875 Mor transcription activator Vc3S01_0856 9ecf8df8ef8c7668fcc2ca768d44f177 439 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 21 437 1.7E-174 T 12-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Vc3S01_0856 9ecf8df8ef8c7668fcc2ca768d44f177 439 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 24 435 6.7E-194 T 12-10-2018 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Vc3S01_0856 9ecf8df8ef8c7668fcc2ca768d44f177 439 SUPERFAMILY SSF52540 93 362 3.92E-96 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0856 9ecf8df8ef8c7668fcc2ca768d44f177 439 SMART SM00382 158 342 5.6E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_0856 9ecf8df8ef8c7668fcc2ca768d44f177 439 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 348 357 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Vc3S01_0856 9ecf8df8ef8c7668fcc2ca768d44f177 439 Gene3D G3DSA:3.40.50.12240 17 439 7.4E-156 T 12-10-2018 Vc3S01_0856 9ecf8df8ef8c7668fcc2ca768d44f177 439 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 146 357 1.7E-73 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Vc3S01_1421 feb2edbb03e0fea44e3ef5bea275f944 351 Pfam PF13487 HD domain 251 281 2.8E-7 T 12-10-2018 Vc3S01_1421 feb2edbb03e0fea44e3ef5bea275f944 351 SUPERFAMILY SSF55781 8 115 1.1E-6 T 12-10-2018 Vc3S01_1421 feb2edbb03e0fea44e3ef5bea275f944 351 Gene3D G3DSA:1.10.3210.10 133 345 4.9E-29 T 12-10-2018 Vc3S01_1421 feb2edbb03e0fea44e3ef5bea275f944 351 SUPERFAMILY SSF109604 152 329 5.34E-13 T 12-10-2018 Vc3S01_2409 2491c9035fad0a98783a59eec585c3c4 177 Pfam PF00258 Flavodoxin 6 162 1.6E-32 T 12-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 Vc3S01_2409 2491c9035fad0a98783a59eec585c3c4 177 SUPERFAMILY SSF52218 4 172 9.63E-50 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Vc3S01_2409 2491c9035fad0a98783a59eec585c3c4 177 PIRSF PIRSF038996 1 174 1.2E-65 T 12-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 Vc3S01_2409 2491c9035fad0a98783a59eec585c3c4 177 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 12-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 Vc3S01_2409 2491c9035fad0a98783a59eec585c3c4 177 TIGRFAM TIGR01752 flav_long: flavodoxin 4 170 5.1E-70 T 12-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 Vc3S01_2409 2491c9035fad0a98783a59eec585c3c4 177 Gene3D G3DSA:3.40.50.360 3 176 3.2E-54 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Vc3S01_1291 c92864f7a88ea10a5930cb06104160c4 85 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 72 1.8E-15 T 12-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM Vc3S01_1291 c92864f7a88ea10a5930cb06104160c4 85 SUPERFAMILY SSF143120 1 75 1.48E-16 T 12-10-2018 IPR036165 YefM-like superfamily Vc3S01_1291 c92864f7a88ea10a5930cb06104160c4 85 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 5 56 4.5E-11 T 12-10-2018 Vc3S01_1291 c92864f7a88ea10a5930cb06104160c4 85 Gene3D G3DSA:3.40.1620.10 1 40 1.1E-5 T 12-10-2018 Vc3S01_1236 d6be1899ef178bbb3a911029725f24ec 58 Pfam PF03918 Cytochrome C biogenesis protein 1 57 4.5E-18 T 12-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family Vc3S01_1236 d6be1899ef178bbb3a911029725f24ec 58 Gene3D G3DSA:1.10.8.640 1 35 3.0E-9 T 12-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily Vc3S01_2800 288fa5ac1264f1574332bafe8cfd9e99 455 SUPERFAMILY SSF50156 249 358 2.4E-25 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 Vc3S01_2800 288fa5ac1264f1574332bafe8cfd9e99 455 Pfam PF13180 PDZ domain 268 358 5.3E-18 T 12-10-2018 IPR001478 PDZ domain GO:0005515 Vc3S01_2800 288fa5ac1264f1574332bafe8cfd9e99 455 Pfam PF13180 PDZ domain 383 446 2.4E-8 T 12-10-2018 IPR001478 PDZ domain GO:0005515 Vc3S01_2800 288fa5ac1264f1574332bafe8cfd9e99 455 SUPERFAMILY SSF50494 22 276 1.18E-63 T 12-10-2018 IPR009003 Peptidase S1, PA clan Vc3S01_2800 288fa5ac1264f1574332bafe8cfd9e99 455 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 39 453 4.3E-163 T 12-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 Vc3S01_2800 288fa5ac1264f1574332bafe8cfd9e99 455 Pfam PF13365 Trypsin-like peptidase domain 92 228 4.5E-31 T 12-10-2018 Vc3S01_2800 288fa5ac1264f1574332bafe8cfd9e99 455 Gene3D G3DSA:2.40.10.120 37 261 1.1E-84 T 12-10-2018 Vc3S01_2800 288fa5ac1264f1574332bafe8cfd9e99 455 SUPERFAMILY SSF50156 379 454 3.94E-14 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 Vc3S01_2800 288fa5ac1264f1574332bafe8cfd9e99 455 PRINTS PR00834 HtrA/DegQ protease family signature 221 238 9.0E-57 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Vc3S01_2800 288fa5ac1264f1574332bafe8cfd9e99 455 PRINTS PR00834 HtrA/DegQ protease family signature 307 319 9.0E-57 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Vc3S01_2800 288fa5ac1264f1574332bafe8cfd9e99 455 PRINTS PR00834 HtrA/DegQ protease family signature 164 188 9.0E-57 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Vc3S01_2800 288fa5ac1264f1574332bafe8cfd9e99 455 PRINTS PR00834 HtrA/DegQ protease family signature 199 216 9.0E-57 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Vc3S01_2800 288fa5ac1264f1574332bafe8cfd9e99 455 PRINTS PR00834 HtrA/DegQ protease family signature 102 114 9.0E-57 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Vc3S01_2800 288fa5ac1264f1574332bafe8cfd9e99 455 PRINTS PR00834 HtrA/DegQ protease family signature 123 143 9.0E-57 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Vc3S01_2800 288fa5ac1264f1574332bafe8cfd9e99 455 SMART SM00228 267 349 9.9E-18 T 12-10-2018 IPR001478 PDZ domain GO:0005515 Vc3S01_2800 288fa5ac1264f1574332bafe8cfd9e99 455 SMART SM00228 374 447 1.0E-7 T 12-10-2018 IPR001478 PDZ domain GO:0005515 Vc3S01_2800 288fa5ac1264f1574332bafe8cfd9e99 455 Gene3D G3DSA:2.30.42.10 362 455 8.1E-27 T 12-10-2018 Vc3S01_2800 288fa5ac1264f1574332bafe8cfd9e99 455 Gene3D G3DSA:2.30.42.10 265 361 1.7E-28 T 12-10-2018 Vc3S01_A1685 e1e91a46dde07803f6e73f1a54112c47 802 SUPERFAMILY SSF49303 732 800 1.58E-6 T 12-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily Vc3S01_A1685 e1e91a46dde07803f6e73f1a54112c47 802 Gene3D G3DSA:2.60.120.260 3 190 2.4E-47 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily Vc3S01_A1685 e1e91a46dde07803f6e73f1a54112c47 802 SUPERFAMILY SSF49785 3 184 4.25E-47 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily Vc3S01_A1685 e1e91a46dde07803f6e73f1a54112c47 802 Gene3D G3DSA:2.60.40.10 191 282 1.7E-10 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_A1685 e1e91a46dde07803f6e73f1a54112c47 802 SUPERFAMILY SSF49303 191 285 1.73E-14 T 12-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily Vc3S01_A1685 e1e91a46dde07803f6e73f1a54112c47 802 Pfam PF00703 Glycosyl hydrolases family 2 214 286 1.1E-4 T 12-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 Vc3S01_A1685 e1e91a46dde07803f6e73f1a54112c47 802 Gene3D G3DSA:3.20.20.80 283 629 2.1E-120 T 12-10-2018 Vc3S01_A1685 e1e91a46dde07803f6e73f1a54112c47 802 SUPERFAMILY SSF51445 283 631 3.49E-101 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily Vc3S01_0310 3bb558e02b541ef8d6d2dca0ca8fe9a5 72 Pfam PF12292 Protein of unknown function (DUF3624) 1 58 8.1E-23 T 12-10-2018 IPR022072 Protein of unknown function DUF3624 Vc3S01_0417 b7c3b6667ec01deb11462b174956e310 241 SMART SM00382 28 231 8.2E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_0417 b7c3b6667ec01deb11462b174956e310 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 215 236 5.8E-9 T 12-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal Vc3S01_0417 b7c3b6667ec01deb11462b174956e310 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 4 241 1.7E-126 T 12-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 Vc3S01_0417 b7c3b6667ec01deb11462b174956e310 241 Pfam PF00005 ABC transporter 20 166 7.3E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_0417 b7c3b6667ec01deb11462b174956e310 241 SUPERFAMILY SSF52540 3 237 4.17E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0417 b7c3b6667ec01deb11462b174956e310 241 Gene3D G3DSA:3.40.50.300 2 241 8.4E-73 T 12-10-2018 Vc3S01_0417 b7c3b6667ec01deb11462b174956e310 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_2914 f434fd5ca6ada3fcf83558168e6376a3 206 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 3 108 8.7E-24 T 12-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 Vc3S01_2914 f434fd5ca6ada3fcf83558168e6376a3 206 Gene3D G3DSA:3.10.50.40 69 206 9.3E-50 T 12-10-2018 Vc3S01_2914 f434fd5ca6ada3fcf83558168e6376a3 206 SUPERFAMILY SSF54534 7 205 5.11E-54 T 12-10-2018 Vc3S01_2914 f434fd5ca6ada3fcf83558168e6376a3 206 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 117 203 1.4E-26 T 12-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain Vc3S01_2914 f434fd5ca6ada3fcf83558168e6376a3 206 Gene3D G3DSA:1.10.287.460 4 68 2.6E-19 T 12-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 Vc3S01_2646 e8a92be60d3c263b9899914c4af7f257 607 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 1 607 46.787 T 12-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 Vc3S01_2646 e8a92be60d3c263b9899914c4af7f257 607 Gene3D G3DSA:3.30.1360.200 270 423 6.3E-51 T 12-10-2018 Vc3S01_2646 e8a92be60d3c263b9899914c4af7f257 607 Pfam PF02355 Protein export membrane protein 425 586 1.5E-17 T 12-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial Vc3S01_2646 e8a92be60d3c263b9899914c4af7f257 607 Gene3D G3DSA:3.30.70.3400 211 429 6.3E-51 T 12-10-2018 Vc3S01_2646 e8a92be60d3c263b9899914c4af7f257 607 PRINTS PR00702 Acriflavin resistance protein family signature 441 464 2.8E-5 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_2646 e8a92be60d3c263b9899914c4af7f257 607 PRINTS PR00702 Acriflavin resistance protein family signature 495 519 2.8E-5 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_2646 e8a92be60d3c263b9899914c4af7f257 607 PRINTS PR00702 Acriflavin resistance protein family signature 570 593 2.8E-5 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_2646 e8a92be60d3c263b9899914c4af7f257 607 Gene3D G3DSA:1.20.1640.10 440 590 2.1E-7 T 12-10-2018 Vc3S01_2646 e8a92be60d3c263b9899914c4af7f257 607 Pfam PF07549 SecD/SecF GG Motif 105 130 2.5E-7 T 12-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site Vc3S01_2646 e8a92be60d3c263b9899914c4af7f257 607 SUPERFAMILY SSF82866 402 598 3.66E-44 T 12-10-2018 Vc3S01_2646 e8a92be60d3c263b9899914c4af7f257 607 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 112 593 5.2E-151 T 12-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 Vc3S01_2646 e8a92be60d3c263b9899914c4af7f257 607 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 337 586 2.9E-82 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Vc3S01_2646 e8a92be60d3c263b9899914c4af7f257 607 Pfam PF13721 SecD export protein N-terminal TM region 1 92 3.5E-28 T 12-10-2018 IPR027398 SecD export protein N-terminal TM domain Vc3S01_A0816 6ebacfa61280ba65591a983a2876940c 598 Gene3D G3DSA:3.40.50.1390 6 186 1.8E-23 T 12-10-2018 Vc3S01_A0816 6ebacfa61280ba65591a983a2876940c 598 Pfam PF13408 Recombinase zinc beta ribbon domain 318 372 2.7E-7 T 12-10-2018 IPR025827 Recombinase zinc beta ribbon domain Vc3S01_A0816 6ebacfa61280ba65591a983a2876940c 598 SMART SM00857 8 179 6.9E-14 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Vc3S01_A0816 6ebacfa61280ba65591a983a2876940c 598 Pfam PF00239 Resolvase, N terminal domain 10 173 3.6E-11 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Vc3S01_A0816 6ebacfa61280ba65591a983a2876940c 598 SUPERFAMILY SSF53041 8 174 4.58E-12 T 12-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 Vc3S01_A0816 6ebacfa61280ba65591a983a2876940c 598 Pfam PF07508 Recombinase 205 304 4.1E-10 T 12-10-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 Vc3S01_A0403 c9588d45fb6db483fad7d13db5633c24 397 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 5 397 3.7E-206 T 12-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 Vc3S01_A0403 c9588d45fb6db483fad7d13db5633c24 397 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 2 395 53.273 T 12-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 Vc3S01_A0403 c9588d45fb6db483fad7d13db5633c24 397 Gene3D G3DSA:3.40.640.10 58 296 1.8E-134 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Vc3S01_A0403 c9588d45fb6db483fad7d13db5633c24 397 Gene3D G3DSA:3.90.1150.10 40 387 1.8E-134 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Vc3S01_A0403 c9588d45fb6db483fad7d13db5633c24 397 Pfam PF00155 Aminotransferase class I and II 43 387 9.6E-75 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Vc3S01_A0403 c9588d45fb6db483fad7d13db5633c24 397 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 241 250 - T 12-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 Vc3S01_A0403 c9588d45fb6db483fad7d13db5633c24 397 SUPERFAMILY SSF53383 4 395 3.71E-121 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Vc3S01_2299 4c40beb860ff89575941fae8d8b2e05a 1037 SUPERFAMILY SSF82714 704 788 8.76E-17 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Vc3S01_2299 4c40beb860ff89575941fae8d8b2e05a 1037 Gene3D G3DSA:3.30.2090.10 178 269 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Vc3S01_2299 4c40beb860ff89575941fae8d8b2e05a 1037 SUPERFAMILY SSF82714 183 266 8.24E-14 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Vc3S01_2299 4c40beb860ff89575941fae8d8b2e05a 1037 Pfam PF00873 AcrB/AcrD/AcrF family 4 1008 3.7E-276 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_2299 4c40beb860ff89575941fae8d8b2e05a 1037 SUPERFAMILY SSF82693 554 657 3.49E-17 T 12-10-2018 Vc3S01_2299 4c40beb860ff89575941fae8d8b2e05a 1037 Gene3D G3DSA:3.30.70.1430 556 654 0.0 T 12-10-2018 Vc3S01_2299 4c40beb860ff89575941fae8d8b2e05a 1037 SUPERFAMILY SSF82693 139 324 2.25E-18 T 12-10-2018 Vc3S01_2299 4c40beb860ff89575941fae8d8b2e05a 1037 SUPERFAMILY SSF82866 794 1010 2.35E-49 T 12-10-2018 Vc3S01_2299 4c40beb860ff89575941fae8d8b2e05a 1037 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 4.1E-71 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_2299 4c40beb860ff89575941fae8d8b2e05a 1037 PRINTS PR00702 Acriflavin resistance protein family signature 541 558 4.1E-71 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_2299 4c40beb860ff89575941fae8d8b2e05a 1037 PRINTS PR00702 Acriflavin resistance protein family signature 611 625 4.1E-71 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_2299 4c40beb860ff89575941fae8d8b2e05a 1037 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 4.1E-71 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_2299 4c40beb860ff89575941fae8d8b2e05a 1037 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 4.1E-71 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_2299 4c40beb860ff89575941fae8d8b2e05a 1037 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 4.1E-71 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_2299 4c40beb860ff89575941fae8d8b2e05a 1037 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 4.1E-71 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_2299 4c40beb860ff89575941fae8d8b2e05a 1037 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 4.1E-71 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_2299 4c40beb860ff89575941fae8d8b2e05a 1037 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 4.1E-71 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_2299 4c40beb860ff89575941fae8d8b2e05a 1037 Gene3D G3DSA:1.20.1640.10 502 1005 0.0 T 12-10-2018 Vc3S01_2299 4c40beb860ff89575941fae8d8b2e05a 1037 Gene3D G3DSA:1.20.1640.10 10 501 0.0 T 12-10-2018 Vc3S01_2299 4c40beb860ff89575941fae8d8b2e05a 1037 Gene3D G3DSA:3.30.70.1430 40 799 0.0 T 12-10-2018 Vc3S01_2299 4c40beb860ff89575941fae8d8b2e05a 1037 Gene3D G3DSA:3.30.70.1440 655 848 0.0 T 12-10-2018 Vc3S01_2299 4c40beb860ff89575941fae8d8b2e05a 1037 Gene3D G3DSA:3.30.70.1320 134 326 0.0 T 12-10-2018 Vc3S01_2299 4c40beb860ff89575941fae8d8b2e05a 1037 SUPERFAMILY SSF82866 290 488 2.09E-45 T 12-10-2018 Vc3S01_2299 4c40beb860ff89575941fae8d8b2e05a 1037 SUPERFAMILY SSF82693 40 134 7.59E-25 T 12-10-2018 Vc3S01_2299 4c40beb860ff89575941fae8d8b2e05a 1037 Gene3D G3DSA:3.30.2090.10 703 791 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Vc3S01_A1382 044bdeb15b3ee2f782c114dcd2df9c66 139 Gene3D G3DSA:3.40.1650.10 8 135 1.8E-36 T 12-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 Vc3S01_A1382 044bdeb15b3ee2f782c114dcd2df9c66 139 Hamap MF_01661 D-ribose pyranase [rbsD]. 1 139 32.41 T 12-10-2018 IPR023064 D-ribose pyranase GO:0016872 Vc3S01_A1382 044bdeb15b3ee2f782c114dcd2df9c66 139 Pfam PF05025 RbsD / FucU transport protein family 1 138 6.9E-48 T 12-10-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 Vc3S01_A1382 044bdeb15b3ee2f782c114dcd2df9c66 139 SUPERFAMILY SSF102546 1 139 1.31E-43 T 12-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 Vc3S01_A1917 d092c16bdb6fc83fdb8a9f20ff36ae30 335 Gene3D G3DSA:1.10.260.40 1 64 3.8E-23 T 12-10-2018 Vc3S01_A1917 d092c16bdb6fc83fdb8a9f20ff36ae30 335 Gene3D G3DSA:3.40.50.2300 158 334 1.1E-42 T 12-10-2018 Vc3S01_A1917 d092c16bdb6fc83fdb8a9f20ff36ae30 335 Gene3D G3DSA:3.40.50.2300 65 155 1.4E-11 T 12-10-2018 Vc3S01_A1917 d092c16bdb6fc83fdb8a9f20ff36ae30 335 SUPERFAMILY SSF47413 7 65 7.97E-18 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Vc3S01_A1917 d092c16bdb6fc83fdb8a9f20ff36ae30 335 Pfam PF13377 Periplasmic binding protein-like domain 174 333 9.2E-29 T 12-10-2018 Vc3S01_A1917 d092c16bdb6fc83fdb8a9f20ff36ae30 335 SMART SM00354 7 77 1.5E-28 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Vc3S01_A1917 d092c16bdb6fc83fdb8a9f20ff36ae30 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 11 54 1.2E-16 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Vc3S01_A1917 d092c16bdb6fc83fdb8a9f20ff36ae30 335 SUPERFAMILY SSF53822 66 334 3.37E-53 T 12-10-2018 IPR028082 Periplasmic binding protein-like I Vc3S01_0094 70d40bc79446af2f59539cdeb538888f 417 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 58 76 - T 12-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Vc3S01_0094 70d40bc79446af2f59539cdeb538888f 417 SUPERFAMILY SSF51419 27 284 1.74E-82 T 12-10-2018 IPR029066 PLP-binding barrel Vc3S01_0094 70d40bc79446af2f59539cdeb538888f 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 78 90 2.3E-26 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Vc3S01_0094 70d40bc79446af2f59539cdeb538888f 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 191 204 2.3E-26 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Vc3S01_0094 70d40bc79446af2f59539cdeb538888f 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 370 383 2.3E-26 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Vc3S01_0094 70d40bc79446af2f59539cdeb538888f 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 272 291 2.3E-26 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Vc3S01_0094 70d40bc79446af2f59539cdeb538888f 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 58 76 2.3E-26 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Vc3S01_0094 70d40bc79446af2f59539cdeb538888f 417 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 36 282 2.9E-71 T 12-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Vc3S01_0094 70d40bc79446af2f59539cdeb538888f 417 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 5 412 6.1E-168 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Vc3S01_0094 70d40bc79446af2f59539cdeb538888f 417 SUPERFAMILY SSF50621 261 414 3.56E-53 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Vc3S01_0094 70d40bc79446af2f59539cdeb538888f 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 165 174 3.4E-30 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Vc3S01_0094 70d40bc79446af2f59539cdeb538888f 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 76 93 3.4E-30 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Vc3S01_0094 70d40bc79446af2f59539cdeb538888f 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 380 402 3.4E-30 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Vc3S01_0094 70d40bc79446af2f59539cdeb538888f 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 300 318 3.4E-30 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Vc3S01_0094 70d40bc79446af2f59539cdeb538888f 417 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 16 413 41.376 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Vc3S01_0094 70d40bc79446af2f59539cdeb538888f 417 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 31 370 1.7E-26 T 12-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Vc3S01_0094 70d40bc79446af2f59539cdeb538888f 417 Gene3D G3DSA:2.40.37.10 17 404 8.5E-153 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Vc3S01_0094 70d40bc79446af2f59539cdeb538888f 417 Gene3D G3DSA:3.20.20.10 35 277 8.5E-153 T 12-10-2018 IPR029066 PLP-binding barrel Vc3S01_1060 c45d9f7847def6a98d61f102301b49ea 330 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 241 308 2.2E-19 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Vc3S01_1060 c45d9f7847def6a98d61f102301b49ea 330 Pfam PF00005 ABC transporter 38 189 1.2E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_1060 c45d9f7847def6a98d61f102301b49ea 330 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 240 326 2.3E-26 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Vc3S01_1060 c45d9f7847def6a98d61f102301b49ea 330 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_1060 c45d9f7847def6a98d61f102301b49ea 330 SMART SM00382 46 239 2.0E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_1060 c45d9f7847def6a98d61f102301b49ea 330 SUPERFAMILY SSF52540 11 261 3.86E-73 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_1060 c45d9f7847def6a98d61f102301b49ea 330 Gene3D G3DSA:3.40.50.300 6 330 1.7E-97 T 12-10-2018 Vc3S01_0517 73e074bfb4e49e4e2e209fd8a0237ce7 243 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 238 7.9E-99 T 12-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 Vc3S01_0517 73e074bfb4e49e4e2e209fd8a0237ce7 243 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 243 133.219 T 12-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 Vc3S01_0517 73e074bfb4e49e4e2e209fd8a0237ce7 243 SUPERFAMILY SSF63892 4 241 6.67E-102 T 12-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 Vc3S01_0517 73e074bfb4e49e4e2e209fd8a0237ce7 243 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 238 2.9E-105 T 12-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 Vc3S01_0517 73e074bfb4e49e4e2e209fd8a0237ce7 243 Gene3D G3DSA:3.20.20.70 1 243 8.9E-109 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_A1101 55fc142d552ccc8945c890400bcee528 877 Gene3D G3DSA:3.40.50.720 1 118 5.0E-27 T 12-10-2018 Vc3S01_A1101 55fc142d552ccc8945c890400bcee528 877 Pfam PF13380 CoA binding domain 12 124 2.0E-16 T 12-10-2018 IPR003781 CoA-binding GO:0048037 Vc3S01_A1101 55fc142d552ccc8945c890400bcee528 877 SUPERFAMILY SSF55729 718 862 3.31E-20 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_A1101 55fc142d552ccc8945c890400bcee528 877 SMART SM00881 7 102 6.2E-19 T 12-10-2018 IPR003781 CoA-binding GO:0048037 Vc3S01_A1101 55fc142d552ccc8945c890400bcee528 877 SUPERFAMILY SSF52210 281 441 2.62E-37 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Vc3S01_A1101 55fc142d552ccc8945c890400bcee528 877 Gene3D G3DSA:3.40.50.261 119 277 7.5E-43 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Vc3S01_A1101 55fc142d552ccc8945c890400bcee528 877 Gene3D G3DSA:3.40.630.30 713 877 2.3E-39 T 12-10-2018 Vc3S01_A1101 55fc142d552ccc8945c890400bcee528 877 Gene3D G3DSA:3.40.50.261 279 449 6.3E-48 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Vc3S01_A1101 55fc142d552ccc8945c890400bcee528 877 Pfam PF00583 Acetyltransferase (GNAT) family 756 859 4.8E-8 T 12-10-2018 IPR000182 GNAT domain Vc3S01_A1101 55fc142d552ccc8945c890400bcee528 877 Pfam PF13549 ATP-grasp domain 470 690 2.6E-67 T 12-10-2018 Vc3S01_A1101 55fc142d552ccc8945c890400bcee528 877 SUPERFAMILY SSF52210 118 276 6.02E-31 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Vc3S01_A1101 55fc142d552ccc8945c890400bcee528 877 SUPERFAMILY SSF51735 2 128 2.8E-26 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_A1101 55fc142d552ccc8945c890400bcee528 877 SUPERFAMILY SSF56059 477 684 3.14E-26 T 12-10-2018 Vc3S01_A1101 55fc142d552ccc8945c890400bcee528 877 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 140 274 6.9E-43 T 12-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain Vc3S01_A1101 55fc142d552ccc8945c890400bcee528 877 Gene3D G3DSA:3.30.470.20 476 687 2.9E-55 T 12-10-2018 Vc3S01_A1101 55fc142d552ccc8945c890400bcee528 877 Gene3D G3DSA:3.30.1490.20 495 572 2.9E-55 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Vc3S01_A0757 2de3f030408a887ceef97164dde63310 181 SMART SM01322 1 174 5.9E-92 T 12-10-2018 IPR009822 YaeQ Vc3S01_A0757 2de3f030408a887ceef97164dde63310 181 PIRSF PIRSF011484 1 179 1.6E-61 T 12-10-2018 IPR009822 YaeQ Vc3S01_A0757 2de3f030408a887ceef97164dde63310 181 Pfam PF07152 YaeQ protein 1 171 2.3E-63 T 12-10-2018 IPR009822 YaeQ Vc3S01_A0757 2de3f030408a887ceef97164dde63310 181 Gene3D G3DSA:3.10.640.10 1 177 1.3E-63 T 12-10-2018 IPR038590 YaeQ superfamily Vc3S01_A0757 2de3f030408a887ceef97164dde63310 181 SUPERFAMILY SSF52980 2 178 1.05E-61 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Vc3S01_1250 641f425ec2f9fc62fb24ef6c11ece244 428 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 9 423 4.4E-101 T 12-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Vc3S01_1250 641f425ec2f9fc62fb24ef6c11ece244 428 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 422 2.1E-106 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Vc3S01_1250 641f425ec2f9fc62fb24ef6c11ece244 428 PIRSF PIRSF006066 1 427 2.1E-74 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Vc3S01_1428 e8d7e6654743ab2553963fc7f9306373 95 Pfam PF03992 Antibiotic biosynthesis monooxygenase 5 80 6.5E-11 T 12-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain Vc3S01_1428 e8d7e6654743ab2553963fc7f9306373 95 Gene3D G3DSA:3.30.70.100 1 93 2.9E-21 T 12-10-2018 Vc3S01_1428 e8d7e6654743ab2553963fc7f9306373 95 SUPERFAMILY SSF54909 5 88 6.19E-20 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel Vc3S01_A1154 9aedef0b43d4422438c9d8c5b2442f98 373 Gene3D G3DSA:2.40.50.100 63 95 1.3E-15 T 12-10-2018 Vc3S01_A1154 9aedef0b43d4422438c9d8c5b2442f98 373 SUPERFAMILY SSF111369 62 130 2.09E-7 T 12-10-2018 Vc3S01_A1154 9aedef0b43d4422438c9d8c5b2442f98 373 SUPERFAMILY SSF111369 195 298 7.19E-7 T 12-10-2018 Vc3S01_A1154 9aedef0b43d4422438c9d8c5b2442f98 373 Gene3D G3DSA:1.10.287.470 96 190 1.3E-15 T 12-10-2018 Vc3S01_A1154 9aedef0b43d4422438c9d8c5b2442f98 373 Gene3D G3DSA:2.40.30.170 233 352 1.7E-25 T 12-10-2018 Vc3S01_A1154 9aedef0b43d4422438c9d8c5b2442f98 373 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 63 292 2.1E-17 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Vc3S01_0516 c0f2e6ba000dc4877047c260dea71f87 243 Pfam PF02565 Recombination protein O C terminal 90 230 2.7E-24 T 12-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 Vc3S01_0516 c0f2e6ba000dc4877047c260dea71f87 243 Hamap MF_00201 DNA repair protein RecO [recO]. 6 235 22.927 T 12-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 Vc3S01_0516 c0f2e6ba000dc4877047c260dea71f87 243 TIGRFAM TIGR00613 reco: DNA repair protein RecO 11 234 3.1E-42 T 12-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 Vc3S01_0516 c0f2e6ba000dc4877047c260dea71f87 243 Gene3D G3DSA:1.20.1440.120 84 242 1.1E-52 T 12-10-2018 Vc3S01_0516 c0f2e6ba000dc4877047c260dea71f87 243 SUPERFAMILY SSF57863 91 170 1.67E-11 T 12-10-2018 IPR037278 ARFGAP/RecO-like zinc finger Vc3S01_0516 c0f2e6ba000dc4877047c260dea71f87 243 SUPERFAMILY SSF50249 10 80 5.82E-16 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Vc3S01_0516 c0f2e6ba000dc4877047c260dea71f87 243 Pfam PF11967 Recombination protein O N terminal 11 81 2.4E-24 T 12-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal Vc3S01_0516 c0f2e6ba000dc4877047c260dea71f87 243 Gene3D G3DSA:2.40.50.140 6 83 4.1E-34 T 12-10-2018 Vc3S01_A0227 47d873e791abeb09bd0ab6ede84cc76d 327 SUPERFAMILY SSF56935 22 327 5.72E-44 T 12-10-2018 Vc3S01_A0227 47d873e791abeb09bd0ab6ede84cc76d 327 PRINTS PR00183 E.coli/Salmonella-type porin signature 93 115 2.5E-8 T 12-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 Vc3S01_A0227 47d873e791abeb09bd0ab6ede84cc76d 327 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 2.5E-8 T 12-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 Vc3S01_A0227 47d873e791abeb09bd0ab6ede84cc76d 327 PRINTS PR00183 E.coli/Salmonella-type porin signature 150 172 2.5E-8 T 12-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 Vc3S01_A0227 47d873e791abeb09bd0ab6ede84cc76d 327 PRINTS PR00183 E.coli/Salmonella-type porin signature 291 310 2.5E-8 T 12-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 Vc3S01_A0227 47d873e791abeb09bd0ab6ede84cc76d 327 Pfam PF00267 Gram-negative porin 49 327 1.4E-6 T 12-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 Vc3S01_A0227 47d873e791abeb09bd0ab6ede84cc76d 327 Gene3D G3DSA:2.40.160.10 22 327 2.7E-44 T 12-10-2018 IPR023614 Porin domain superfamily Vc3S01_0551 989ddc637b4926ddd08b1a752a4dc9fa 264 Pfam PF01578 Cytochrome C assembly protein 39 262 8.9E-46 T 12-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 Vc3S01_A1992 262f7cee3b878e9fe93a5e73fc319ed6 268 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 219 260 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Vc3S01_A1992 262f7cee3b878e9fe93a5e73fc319ed6 268 Gene3D G3DSA:2.60.120.10 8 102 1.4E-5 T 12-10-2018 IPR014710 RmlC-like jelly roll fold Vc3S01_A1992 262f7cee3b878e9fe93a5e73fc319ed6 268 Gene3D G3DSA:1.10.10.60 165 268 5.1E-21 T 12-10-2018 Vc3S01_A1992 262f7cee3b878e9fe93a5e73fc319ed6 268 SUPERFAMILY SSF46689 223 266 1.93E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_A1992 262f7cee3b878e9fe93a5e73fc319ed6 268 Pfam PF12833 Helix-turn-helix domain 190 264 8.4E-19 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_A1992 262f7cee3b878e9fe93a5e73fc319ed6 268 SUPERFAMILY SSF51182 29 190 6.67E-13 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily Vc3S01_A1992 262f7cee3b878e9fe93a5e73fc319ed6 268 SMART SM00342 182 264 1.2E-23 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_2885 89ee0b1161cfa52e6ca10d0526b8cf15 209 SUPERFAMILY SSF52507 9 205 3.53E-57 T 12-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Vc3S01_2885 89ee0b1161cfa52e6ca10d0526b8cf15 209 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 9 206 34.893 T 12-10-2018 IPR004507 Flavin prenyltransferase UbiX-like Vc3S01_2885 89ee0b1161cfa52e6ca10d0526b8cf15 209 Pfam PF02441 Flavoprotein 10 185 4.4E-26 T 12-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 Vc3S01_2885 89ee0b1161cfa52e6ca10d0526b8cf15 209 Gene3D G3DSA:3.40.50.1950 2 207 5.4E-78 T 12-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Vc3S01_2885 89ee0b1161cfa52e6ca10d0526b8cf15 209 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 11 204 3.9E-57 T 12-10-2018 IPR004507 Flavin prenyltransferase UbiX-like Vc3S01_A1918 200a696b54b3f3ff7ea312e04a2b576c 209 SMART SM00857 3 134 3.9E-11 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Vc3S01_A1918 200a696b54b3f3ff7ea312e04a2b576c 209 Pfam PF00239 Resolvase, N terminal domain 4 137 8.6E-17 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Vc3S01_A1918 200a696b54b3f3ff7ea312e04a2b576c 209 Gene3D G3DSA:3.40.50.1390 1 124 4.4E-16 T 12-10-2018 Vc3S01_A1918 200a696b54b3f3ff7ea312e04a2b576c 209 SUPERFAMILY SSF53041 1 137 8.24E-20 T 12-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 Vc3S01_0573 a25d3d5656958033ffe4fd89d147705c 222 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 12-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 Vc3S01_0573 a25d3d5656958033ffe4fd89d147705c 222 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 12-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 Vc3S01_0573 a25d3d5656958033ffe4fd89d147705c 222 SUPERFAMILY SSF53056 2 212 4.45E-74 T 12-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 Vc3S01_0573 a25d3d5656958033ffe4fd89d147705c 222 Pfam PF00484 Carbonic anhydrase 38 188 1.2E-49 T 12-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 Vc3S01_0573 a25d3d5656958033ffe4fd89d147705c 222 SMART SM00947 30 192 2.3E-66 T 12-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 Vc3S01_0573 a25d3d5656958033ffe4fd89d147705c 222 Gene3D G3DSA:3.40.1050.10 1 222 3.3E-90 T 12-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 Vc3S01_A0178 4a873b924d0c19a79966c02af144bbd5 213 Pfam PF01292 Prokaryotic cytochrome b561 4 170 2.7E-21 T 12-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 Vc3S01_A0178 4a873b924d0c19a79966c02af144bbd5 213 Gene3D G3DSA:1.20.950.20 1 158 6.3E-13 T 12-10-2018 Vc3S01_A0178 4a873b924d0c19a79966c02af144bbd5 213 SUPERFAMILY SSF81342 2 172 1.07E-33 T 12-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 Vc3S01_0778 7fe45e0bdd187dedf545686c851081f3 874 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 874 340.05 T 12-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 Vc3S01_0778 7fe45e0bdd187dedf545686c851081f3 874 PIRSF PIRSF006288 7 874 0.0 T 12-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 Vc3S01_0778 7fe45e0bdd187dedf545686c851081f3 874 Gene3D G3DSA:3.30.70.260 795 873 1.1E-5 T 12-10-2018 Vc3S01_0778 7fe45e0bdd187dedf545686c851081f3 874 Pfam PF01966 HD domain 452 584 1.5E-13 T 12-10-2018 IPR006674 HD domain Vc3S01_0778 7fe45e0bdd187dedf545686c851081f3 874 Pfam PF08335 GlnD PII-uridylyltransferase 176 314 4.2E-35 T 12-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 Vc3S01_0778 7fe45e0bdd187dedf545686c851081f3 874 Pfam PF01909 Nucleotidyltransferase domain 57 108 1.3E-7 T 12-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 Vc3S01_0778 7fe45e0bdd187dedf545686c851081f3 874 SMART SM00471 447 594 5.0E-10 T 12-10-2018 IPR003607 HD/PDEase domain Vc3S01_0778 7fe45e0bdd187dedf545686c851081f3 874 SUPERFAMILY SSF81301 52 171 1.64E-20 T 12-10-2018 Vc3S01_0778 7fe45e0bdd187dedf545686c851081f3 874 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 29 868 0.0 T 12-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 Vc3S01_0778 7fe45e0bdd187dedf545686c851081f3 874 SUPERFAMILY SSF109604 418 588 6.59E-14 T 12-10-2018 Vc3S01_0778 7fe45e0bdd187dedf545686c851081f3 874 Gene3D G3DSA:1.10.3210.10 435 580 9.4E-9 T 12-10-2018 Vc3S01_0778 7fe45e0bdd187dedf545686c851081f3 874 SUPERFAMILY SSF81593 186 310 2.67E-9 T 12-10-2018 Vc3S01_0778 7fe45e0bdd187dedf545686c851081f3 874 SUPERFAMILY SSF55021 796 859 3.24E-10 T 12-10-2018 Vc3S01_0778 7fe45e0bdd187dedf545686c851081f3 874 Pfam PF01842 ACT domain 802 847 7.1E-8 T 12-10-2018 IPR002912 ACT domain Vc3S01_0778 7fe45e0bdd187dedf545686c851081f3 874 SUPERFAMILY SSF55021 689 755 1.15E-8 T 12-10-2018 Vc3S01_2755 6d0c1e7ce35e0dad17f96c13fe11a1b8 489 Gene3D G3DSA:3.50.50.60 251 406 8.7E-38 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_2755 6d0c1e7ce35e0dad17f96c13fe11a1b8 489 SUPERFAMILY SSF51971 143 407 5.89E-66 T 12-10-2018 Vc3S01_2755 6d0c1e7ce35e0dad17f96c13fe11a1b8 489 Gene3D G3DSA:1.10.1060.10 10 143 4.2E-24 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Vc3S01_2755 6d0c1e7ce35e0dad17f96c13fe11a1b8 489 SUPERFAMILY SSF46548 2 155 3.4E-36 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Vc3S01_2755 6d0c1e7ce35e0dad17f96c13fe11a1b8 489 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 38 131 2.9E-24 T 12-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 Vc3S01_2755 6d0c1e7ce35e0dad17f96c13fe11a1b8 489 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 146 459 2.2E-25 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Vc3S01_2755 6d0c1e7ce35e0dad17f96c13fe11a1b8 489 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 478 1.0E-197 T 12-10-2018 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 Vc3S01_2755 6d0c1e7ce35e0dad17f96c13fe11a1b8 489 Gene3D G3DSA:3.40.50.720 144 250 6.1E-14 T 12-10-2018 Vc3S01_2755 6d0c1e7ce35e0dad17f96c13fe11a1b8 489 PRINTS PR00419 Adrenodoxin reductase family signature 146 168 3.8E-23 T 12-10-2018 Vc3S01_2755 6d0c1e7ce35e0dad17f96c13fe11a1b8 489 PRINTS PR00419 Adrenodoxin reductase family signature 169 182 3.8E-23 T 12-10-2018 Vc3S01_2755 6d0c1e7ce35e0dad17f96c13fe11a1b8 489 PRINTS PR00419 Adrenodoxin reductase family signature 211 221 3.8E-23 T 12-10-2018 Vc3S01_2755 6d0c1e7ce35e0dad17f96c13fe11a1b8 489 PRINTS PR00419 Adrenodoxin reductase family signature 286 300 3.8E-23 T 12-10-2018 Vc3S01_0248 2b7744ef74b8fe0a5c4dededbf57506d 154 Gene3D G3DSA:3.40.50.300 2 153 2.5E-49 T 12-10-2018 Vc3S01_0248 2b7744ef74b8fe0a5c4dededbf57506d 154 SUPERFAMILY SSF52540 27 152 3.05E-24 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0248 2b7744ef74b8fe0a5c4dededbf57506d 154 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 139 1.8E-53 T 12-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 Vc3S01_0248 2b7744ef74b8fe0a5c4dededbf57506d 154 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 133 2.8E-43 T 12-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 Vc3S01_A1472 71659e832484d63a97d60bfbb5545ff6 663 Pfam PF02780 Transketolase, C-terminal domain 540 654 5.4E-21 T 12-10-2018 IPR033248 Transketolase, C-terminal domain Vc3S01_A1472 71659e832484d63a97d60bfbb5545ff6 663 ProSitePatterns PS00802 Transketolase signature 2. 466 482 - T 12-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Vc3S01_A1472 71659e832484d63a97d60bfbb5545ff6 663 SUPERFAMILY SSF52518 332 525 1.23E-68 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold Vc3S01_A1472 71659e832484d63a97d60bfbb5545ff6 663 SUPERFAMILY SSF52518 5 328 6.96E-121 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold Vc3S01_A1472 71659e832484d63a97d60bfbb5545ff6 663 Pfam PF02779 Transketolase, pyrimidine binding domain 353 523 5.0E-48 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Vc3S01_A1472 71659e832484d63a97d60bfbb5545ff6 663 Gene3D G3DSA:3.40.50.970 2 324 3.3E-132 T 12-10-2018 Vc3S01_A1472 71659e832484d63a97d60bfbb5545ff6 663 ProSitePatterns PS00801 Transketolase signature 1. 11 31 - T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Vc3S01_A1472 71659e832484d63a97d60bfbb5545ff6 663 SUPERFAMILY SSF52922 532 663 3.27E-45 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Vc3S01_A1472 71659e832484d63a97d60bfbb5545ff6 663 SMART SM00861 353 524 1.7E-67 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Vc3S01_A1472 71659e832484d63a97d60bfbb5545ff6 663 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 332 5.5E-167 T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Vc3S01_A1472 71659e832484d63a97d60bfbb5545ff6 663 TIGRFAM TIGR00232 tktlase_bact: transketolase 6 662 0.0 T 12-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 Vc3S01_A1472 71659e832484d63a97d60bfbb5545ff6 663 Gene3D G3DSA:3.40.50.970 325 536 5.3E-86 T 12-10-2018 Vc3S01_A1472 71659e832484d63a97d60bfbb5545ff6 663 Gene3D G3DSA:3.40.50.920 537 663 2.0E-46 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Vc3S01_A0576 65ce6edc573018300edc06d8ab5ac238 147 SUPERFAMILY SSF55729 1 137 5.58E-22 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_A0576 65ce6edc573018300edc06d8ab5ac238 147 Pfam PF00583 Acetyltransferase (GNAT) family 30 129 9.2E-15 T 12-10-2018 IPR000182 GNAT domain Vc3S01_A0576 65ce6edc573018300edc06d8ab5ac238 147 Gene3D G3DSA:3.40.630.30 42 142 4.3E-19 T 12-10-2018 Vc3S01_A0159 2e568e1a69f50324cbeaf765ffbefac3 520 Pfam PF13450 NAD(P)-binding Rossmann-like domain 26 90 4.6E-9 T 12-10-2018 Vc3S01_A0159 2e568e1a69f50324cbeaf765ffbefac3 520 SUPERFAMILY SSF51905 22 506 4.14E-24 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_A0159 2e568e1a69f50324cbeaf765ffbefac3 520 Gene3D G3DSA:3.50.50.60 19 167 1.3E-11 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_1193 a25c33f2dbcb342857c6d6fa63283686 190 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 175 18.468 T 12-10-2018 IPR006008 Intracellular septation protein A GO:0016021 Vc3S01_1193 a25c33f2dbcb342857c6d6fa63283686 190 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 177 1.8E-63 T 12-10-2018 IPR006008 Intracellular septation protein A GO:0016021 Vc3S01_1193 a25c33f2dbcb342857c6d6fa63283686 190 Pfam PF04279 Intracellular septation protein A 1 174 1.7E-67 T 12-10-2018 IPR006008 Intracellular septation protein A GO:0016021 Vc3S01_1872 87815ea3121b4123b9448b521fcb0eee 557 Gene3D G3DSA:1.20.1560.10 15 309 1.5E-7 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Vc3S01_1872 87815ea3121b4123b9448b521fcb0eee 557 SUPERFAMILY SSF90123 53 468 1.31E-14 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Vc3S01_1872 87815ea3121b4123b9448b521fcb0eee 557 SUPERFAMILY SSF52540 321 527 1.41E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_1872 87815ea3121b4123b9448b521fcb0eee 557 SMART SM00382 345 535 2.6E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_1872 87815ea3121b4123b9448b521fcb0eee 557 Gene3D G3DSA:3.40.50.300 321 551 8.4E-61 T 12-10-2018 Vc3S01_1872 87815ea3121b4123b9448b521fcb0eee 557 Pfam PF00005 ABC transporter 337 485 1.7E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_1872 87815ea3121b4123b9448b521fcb0eee 557 ProSitePatterns PS00211 ABC transporters family signature. 457 471 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_0741 3186510381c30b52f0a8a1c45f32b4f9 220 Gene3D G3DSA:1.10.10.1320 1 106 3.0E-13 T 12-10-2018 Vc3S01_0741 3186510381c30b52f0a8a1c45f32b4f9 220 SUPERFAMILY SSF51182 111 203 3.66E-13 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily Vc3S01_0741 3186510381c30b52f0a8a1c45f32b4f9 220 TIGRFAM TIGR02451 anti_sig_ChrR: anti-sigma factor, putative, ChrR family 3 217 4.6E-73 T 12-10-2018 IPR012807 Anti-sigma factor ChrR, putative Vc3S01_0741 3186510381c30b52f0a8a1c45f32b4f9 220 Pfam PF12973 ChrR Cupin-like domain 128 194 5.0E-14 T 12-10-2018 IPR025979 ChrR-like cupin domain Vc3S01_0741 3186510381c30b52f0a8a1c45f32b4f9 220 Gene3D G3DSA:2.60.120.10 109 198 9.0E-25 T 12-10-2018 IPR014710 RmlC-like jelly roll fold Vc3S01_0741 3186510381c30b52f0a8a1c45f32b4f9 220 Pfam PF13490 Putative zinc-finger 9 37 8.2E-5 T 12-10-2018 IPR027383 Putative zinc-finger Vc3S01_2275 ce9a4409f24863d22bcd220d584dfd92 196 Gene3D G3DSA:3.40.50.10610 39 188 3.7E-43 T 12-10-2018 Vc3S01_2275 ce9a4409f24863d22bcd220d584dfd92 196 Pfam PF13036 Peptidoglycan-synthase activator LpoB 41 185 4.5E-55 T 12-10-2018 IPR014094 Penicillin-binding protein activator LpoB Vc3S01_2275 ce9a4409f24863d22bcd220d584dfd92 196 TIGRFAM TIGR02722 lp_: uncharacterized lipoprotein 3 187 1.7E-74 T 12-10-2018 IPR014094 Penicillin-binding protein activator LpoB Vc3S01_A2041 ad99de7dff7bb01030bef5ece95f5245 195 Pfam PF00924 Mechanosensitive ion channel 65 170 2.7E-10 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 Vc3S01_A2041 ad99de7dff7bb01030bef5ece95f5245 195 SUPERFAMILY SSF50182 105 171 1.9E-11 T 12-10-2018 IPR010920 LSM domain superfamily Vc3S01_A2041 ad99de7dff7bb01030bef5ece95f5245 195 Gene3D G3DSA:2.30.30.60 120 171 5.9E-6 T 12-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily Vc3S01_1960 40aebe9262aa5bd67d9252687a0202f6 817 Pfam PF02687 FtsX-like permease family 269 368 6.3E-6 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Vc3S01_1960 40aebe9262aa5bd67d9252687a0202f6 817 Pfam PF02687 FtsX-like permease family 715 809 1.3E-7 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Vc3S01_0625 2853e5d9b09e02c686f2cb9919ae8367 276 SUPERFAMILY SSF51717 4 273 7.98E-105 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Vc3S01_0625 2853e5d9b09e02c686f2cb9919ae8367 276 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 51 64 - T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Vc3S01_0625 2853e5d9b09e02c686f2cb9919ae8367 276 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 17 271 4.9E-102 T 12-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 Vc3S01_0625 2853e5d9b09e02c686f2cb9919ae8367 276 Gene3D G3DSA:3.20.20.20 1 276 1.3E-110 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Vc3S01_0625 2853e5d9b09e02c686f2cb9919ae8367 276 Pfam PF00809 Pterin binding enzyme 18 257 8.7E-91 T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Vc3S01_0625 2853e5d9b09e02c686f2cb9919ae8367 276 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 17 32 - T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Vc3S01_A0761 9710cc47d793d5650a7ee51d2f9c3eb8 480 Gene3D G3DSA:3.30.70.270 299 466 6.7E-45 T 12-10-2018 Vc3S01_A0761 9710cc47d793d5650a7ee51d2f9c3eb8 480 SUPERFAMILY SSF55073 315 464 5.41E-39 T 12-10-2018 IPR029787 Nucleotide cyclase Vc3S01_A0761 9710cc47d793d5650a7ee51d2f9c3eb8 480 SMART SM00267 299 465 2.4E-49 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A0761 9710cc47d793d5650a7ee51d2f9c3eb8 480 Gene3D G3DSA:3.40.190.10 37 258 7.4E-32 T 12-10-2018 Vc3S01_A0761 9710cc47d793d5650a7ee51d2f9c3eb8 480 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 41 259 2.6E-25 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Vc3S01_A0761 9710cc47d793d5650a7ee51d2f9c3eb8 480 SMART SM00062 40 262 2.6E-7 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Vc3S01_A0761 9710cc47d793d5650a7ee51d2f9c3eb8 480 SUPERFAMILY SSF53850 41 260 7.93E-32 T 12-10-2018 Vc3S01_A0761 9710cc47d793d5650a7ee51d2f9c3eb8 480 Pfam PF00990 Diguanylate cyclase, GGDEF domain 311 461 1.5E-35 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A0761 9710cc47d793d5650a7ee51d2f9c3eb8 480 Gene3D G3DSA:3.40.190.10 125 221 7.4E-32 T 12-10-2018 Vc3S01_A0761 9710cc47d793d5650a7ee51d2f9c3eb8 480 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 309 463 1.1E-33 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_2917 a9404b47b70ea5a99645541fc9be0819 330 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 318 34.701 T 12-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Vc3S01_2917 a9404b47b70ea5a99645541fc9be0819 330 SMART SM00662 23 235 4.9E-104 T 12-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Vc3S01_2917 a9404b47b70ea5a99645541fc9be0819 330 SUPERFAMILY SSF47789 252 326 1.44E-25 T 12-10-2018 Vc3S01_2917 a9404b47b70ea5a99645541fc9be0819 330 Gene3D G3DSA:3.30.1360.10 17 229 9.5E-84 T 12-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Vc3S01_2917 a9404b47b70ea5a99645541fc9be0819 330 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 317 5.9E-112 T 12-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Vc3S01_2917 a9404b47b70ea5a99645541fc9be0819 330 SUPERFAMILY SSF56553 53 179 2.27E-40 T 12-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Vc3S01_2917 a9404b47b70ea5a99645541fc9be0819 330 Gene3D G3DSA:2.170.120.12 53 178 9.5E-84 T 12-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Vc3S01_2917 a9404b47b70ea5a99645541fc9be0819 330 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 62 157 4.2E-24 T 12-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Vc3S01_2917 a9404b47b70ea5a99645541fc9be0819 330 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 257 330 2.0E-36 T 12-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Vc3S01_2917 a9404b47b70ea5a99645541fc9be0819 330 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 246 309 7.1E-24 T 12-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Vc3S01_2917 a9404b47b70ea5a99645541fc9be0819 330 SUPERFAMILY SSF55257 7 234 3.53E-30 T 12-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Vc3S01_2917 a9404b47b70ea5a99645541fc9be0819 330 Gene3D G3DSA:1.10.150.20 245 330 1.4E-38 T 12-10-2018 Vc3S01_2917 a9404b47b70ea5a99645541fc9be0819 330 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 229 2.5E-23 T 12-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Vc3S01_A0155 08b716f746ff72be1e49f488e7b56b6d 139 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 13 135 4.4E-11 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Vc3S01_A0155 08b716f746ff72be1e49f488e7b56b6d 139 SUPERFAMILY SSF54593 10 136 1.07E-22 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Vc3S01_A0155 08b716f746ff72be1e49f488e7b56b6d 139 Gene3D G3DSA:3.10.180.10 12 139 3.2E-25 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Vc3S01_0951 467090a3305a3188cdc606e5d20ca7de 137 Pfam PF01641 SelR domain 16 133 4.2E-54 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 Vc3S01_0951 467090a3305a3188cdc606e5d20ca7de 137 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 12 135 37.638 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 Vc3S01_0951 467090a3305a3188cdc606e5d20ca7de 137 Gene3D G3DSA:2.170.150.20 2 137 3.1E-61 T 12-10-2018 Vc3S01_0951 467090a3305a3188cdc606e5d20ca7de 137 SUPERFAMILY SSF51316 9 136 4.5E-59 T 12-10-2018 IPR011057 Mss4-like superfamily Vc3S01_0951 467090a3305a3188cdc606e5d20ca7de 137 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 11 134 7.2E-58 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 Vc3S01_A0078 948252b1ab6fbeb9c1e10be311d4e14f 160 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 77 156 2.6E-32 T 12-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 Vc3S01_A0078 948252b1ab6fbeb9c1e10be311d4e14f 160 SUPERFAMILY SSF53155 4 80 7.26E-20 T 12-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 Vc3S01_A0078 948252b1ab6fbeb9c1e10be311d4e14f 160 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 7 156 43.577 T 12-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 Vc3S01_A0078 948252b1ab6fbeb9c1e10be311d4e14f 160 Gene3D G3DSA:1.10.10.10 75 158 1.6E-36 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A0078 948252b1ab6fbeb9c1e10be311d4e14f 160 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 76 155 1.8E-37 T 12-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 Vc3S01_A0078 948252b1ab6fbeb9c1e10be311d4e14f 160 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 126 132 - T 12-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 Vc3S01_A0078 948252b1ab6fbeb9c1e10be311d4e14f 160 SUPERFAMILY SSF46767 75 155 9.68E-33 T 12-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 Vc3S01_A0078 948252b1ab6fbeb9c1e10be311d4e14f 160 Gene3D G3DSA:3.30.160.70 3 71 3.9E-18 T 12-10-2018 Vc3S01_A0078 948252b1ab6fbeb9c1e10be311d4e14f 160 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 4 72 1.3E-9 T 12-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 Vc3S01_A2037 1e62666a4d9ae6ac60b5fa053679e4d7 227 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 61 168 1.6E-13 T 12-10-2018 IPR010319 Transglutaminase-like cysteine peptidase, predicted Vc3S01_A2037 1e62666a4d9ae6ac60b5fa053679e4d7 227 Gene3D G3DSA:3.10.620.30 26 219 2.7E-73 T 12-10-2018 Vc3S01_1123 cfc06c30cf3c39025251cc1058cecb4a 353 SUPERFAMILY SSF52096 103 303 5.58E-30 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Vc3S01_1123 cfc06c30cf3c39025251cc1058cecb4a 353 Pfam PF08496 Peptidase family S49 N-terminal 2 162 1.0E-55 T 12-10-2018 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 Vc3S01_1123 cfc06c30cf3c39025251cc1058cecb4a 353 Gene3D G3DSA:3.40.1750.20 206 270 3.3E-45 T 12-10-2018 Vc3S01_1123 cfc06c30cf3c39025251cc1058cecb4a 353 Gene3D G3DSA:3.90.226.10 109 306 3.3E-45 T 12-10-2018 Vc3S01_1123 cfc06c30cf3c39025251cc1058cecb4a 353 Pfam PF01343 Peptidase family S49 166 314 2.3E-47 T 12-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 Vc3S01_A1573 bd1a34d986e8e6e5be1afc6f0df237de 253 Pfam PF00005 ABC transporter 83 210 2.3E-16 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_A1573 bd1a34d986e8e6e5be1afc6f0df237de 253 Gene3D G3DSA:3.40.50.300 24 253 7.4E-36 T 12-10-2018 Vc3S01_A1573 bd1a34d986e8e6e5be1afc6f0df237de 253 SUPERFAMILY SSF52540 83 242 2.66E-30 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A1573 bd1a34d986e8e6e5be1afc6f0df237de 253 SMART SM00382 90 250 8.4E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_A1573 bd1a34d986e8e6e5be1afc6f0df237de 253 ProSitePatterns PS00211 ABC transporters family signature. 181 195 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_A0148 88a363844dd4bdd6087f86f9dcfbc84e 468 Pfam PF07690 Major Facilitator Superfamily 2 381 7.2E-53 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Vc3S01_A0148 88a363844dd4bdd6087f86f9dcfbc84e 468 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 2 464 4.0E-105 T 12-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 Vc3S01_A0148 88a363844dd4bdd6087f86f9dcfbc84e 468 Gene3D G3DSA:1.20.1250.20 231 466 6.7E-13 T 12-10-2018 Vc3S01_A0148 88a363844dd4bdd6087f86f9dcfbc84e 468 SUPERFAMILY SSF103473 2 465 5.89E-57 T 12-10-2018 IPR036259 MFS transporter superfamily Vc3S01_A0148 88a363844dd4bdd6087f86f9dcfbc84e 468 Gene3D G3DSA:1.20.1720.10 1 189 3.4E-44 T 12-10-2018 Vc3S01_2378 fff3bf17ce570c19366e46937aa86c54 644 SMART SM00487 20 313 0.0038 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Vc3S01_2378 fff3bf17ce570c19366e46937aa86c54 644 SUPERFAMILY SSF52540 17 239 6.19E-25 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2378 fff3bf17ce570c19366e46937aa86c54 644 Pfam PF13307 Helicase C-terminal domain 465 622 6.2E-34 T 12-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 Vc3S01_2378 fff3bf17ce570c19366e46937aa86c54 644 Gene3D G3DSA:3.40.50.300 22 290 1.3E-49 T 12-10-2018 Vc3S01_2378 fff3bf17ce570c19366e46937aa86c54 644 SUPERFAMILY SSF52540 45 605 2.36E-11 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2378 fff3bf17ce570c19366e46937aa86c54 644 Gene3D G3DSA:3.40.50.300 448 640 4.1E-36 T 12-10-2018 Vc3S01_2378 fff3bf17ce570c19366e46937aa86c54 644 Pfam PF04851 Type III restriction enzyme, res subunit 22 239 1.7E-5 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Vc3S01_2378 fff3bf17ce570c19366e46937aa86c54 644 SMART SM00491 480 609 3.6E-45 T 12-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 Vc3S01_A1864 e72b9ee7db974ec77c8c9a0efe0fc832 902 SUPERFAMILY SSF52540 14 228 2.62E-11 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A1864 e72b9ee7db974ec77c8c9a0efe0fc832 902 SUPERFAMILY SSF46894 831 894 9.52E-17 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Vc3S01_A1864 e72b9ee7db974ec77c8c9a0efe0fc832 902 Gene3D G3DSA:1.10.10.10 829 900 8.3E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A1864 e72b9ee7db974ec77c8c9a0efe0fc832 902 Gene3D G3DSA:3.40.50.300 12 165 1.6E-6 T 12-10-2018 Vc3S01_A1864 e72b9ee7db974ec77c8c9a0efe0fc832 902 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 869 881 1.3E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_A1864 e72b9ee7db974ec77c8c9a0efe0fc832 902 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 853 869 1.3E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_A1864 e72b9ee7db974ec77c8c9a0efe0fc832 902 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 839 853 1.3E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_A1864 e72b9ee7db974ec77c8c9a0efe0fc832 902 SUPERFAMILY SSF48452 442 805 8.19E-157 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_A1864 e72b9ee7db974ec77c8c9a0efe0fc832 902 Gene3D G3DSA:1.25.40.10 443 811 1.2E-83 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_A1864 e72b9ee7db974ec77c8c9a0efe0fc832 902 ProSitePatterns PS00622 LuxR-type HTH domain signature. 853 880 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_A1864 e72b9ee7db974ec77c8c9a0efe0fc832 902 Pfam PF00196 Bacterial regulatory proteins, luxR family 838 893 1.3E-19 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_A1864 e72b9ee7db974ec77c8c9a0efe0fc832 902 SMART SM00421 836 893 5.8E-20 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_A1864 e72b9ee7db974ec77c8c9a0efe0fc832 902 Hamap MF_01247 HTH-type transcriptional regulator MalT [malT]. 1 902 38.744 T 12-10-2018 IPR023768 Transcriptional regulator HTH-type, MalT Vc3S01_A1864 e72b9ee7db974ec77c8c9a0efe0fc832 902 Pfam PF13181 Tetratricopeptide repeat 696 714 0.18 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_0950 faeb272e8f37e7bd4d7868c84c28be3f 331 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 2.9E-137 T 12-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_0950 faeb272e8f37e7bd4d7868c84c28be3f 331 SMART SM00846 3 150 8.0E-96 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_0950 faeb272e8f37e7bd4d7868c84c28be3f 331 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 312 3.5E-70 T 12-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_0950 faeb272e8f37e7bd4d7868c84c28be3f 331 Gene3D G3DSA:3.30.360.10 149 314 3.5E-155 T 12-10-2018 Vc3S01_0950 faeb272e8f37e7bd4d7868c84c28be3f 331 SUPERFAMILY SSF51735 3 166 2.4E-67 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_0950 faeb272e8f37e7bd4d7868c84c28be3f 331 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 102 6.0E-40 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_0950 faeb272e8f37e7bd4d7868c84c28be3f 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 1.6E-46 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_0950 faeb272e8f37e7bd4d7868c84c28be3f 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 1.6E-46 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_0950 faeb272e8f37e7bd4d7868c84c28be3f 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 1.6E-46 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_0950 faeb272e8f37e7bd4d7868c84c28be3f 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 1.6E-46 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_0950 faeb272e8f37e7bd4d7868c84c28be3f 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 268 283 1.6E-46 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_0950 faeb272e8f37e7bd4d7868c84c28be3f 331 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 12-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_0950 faeb272e8f37e7bd4d7868c84c28be3f 331 PIRSF PIRSF000149 1 331 9.7E-135 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_0950 faeb272e8f37e7bd4d7868c84c28be3f 331 Gene3D G3DSA:3.40.50.720 4 326 3.5E-155 T 12-10-2018 Vc3S01_0950 faeb272e8f37e7bd4d7868c84c28be3f 331 SUPERFAMILY SSF55347 149 312 3.43E-78 T 12-10-2018 Vc3S01_A1096 7ae33e64c312264a6a4634fd9fbb6972 652 Pfam PF00990 Diguanylate cyclase, GGDEF domain 484 639 7.8E-45 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A1096 7ae33e64c312264a6a4634fd9fbb6972 652 SUPERFAMILY SSF55785 234 349 2.86E-9 T 12-10-2018 IPR035965 PAS domain superfamily Vc3S01_A1096 7ae33e64c312264a6a4634fd9fbb6972 652 Pfam PF00672 HAMP domain 180 229 3.7E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Vc3S01_A1096 7ae33e64c312264a6a4634fd9fbb6972 652 Gene3D G3DSA:3.30.70.270 477 645 1.2E-53 T 12-10-2018 Vc3S01_A1096 7ae33e64c312264a6a4634fd9fbb6972 652 Gene3D G3DSA:3.30.450.20 238 356 2.5E-10 T 12-10-2018 Vc3S01_A1096 7ae33e64c312264a6a4634fd9fbb6972 652 SMART SM00091 247 313 2.6E-4 T 12-10-2018 IPR000014 PAS domain Vc3S01_A1096 7ae33e64c312264a6a4634fd9fbb6972 652 SMART SM00091 359 425 5.7E-8 T 12-10-2018 IPR000014 PAS domain Vc3S01_A1096 7ae33e64c312264a6a4634fd9fbb6972 652 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 480 641 5.0E-43 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A1096 7ae33e64c312264a6a4634fd9fbb6972 652 SUPERFAMILY SSF158472 180 229 3.66E-7 T 12-10-2018 Vc3S01_A1096 7ae33e64c312264a6a4634fd9fbb6972 652 Pfam PF17152 Periplasmic sensor domain 37 142 1.2E-9 T 12-10-2018 IPR033417 Periplasmic sensor domain CHASE8 Vc3S01_A1096 7ae33e64c312264a6a4634fd9fbb6972 652 Gene3D G3DSA:3.30.450.20 357 476 2.1E-14 T 12-10-2018 Vc3S01_A1096 7ae33e64c312264a6a4634fd9fbb6972 652 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 364 479 1.7E-12 T 12-10-2018 IPR000014 PAS domain Vc3S01_A1096 7ae33e64c312264a6a4634fd9fbb6972 652 SMART SM00304 180 233 9.9E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Vc3S01_A1096 7ae33e64c312264a6a4634fd9fbb6972 652 SMART SM00267 473 644 1.7E-55 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A1096 7ae33e64c312264a6a4634fd9fbb6972 652 SUPERFAMILY SSF55073 489 642 1.73E-44 T 12-10-2018 IPR029787 Nucleotide cyclase Vc3S01_A1096 7ae33e64c312264a6a4634fd9fbb6972 652 SUPERFAMILY SSF55785 347 467 4.99E-14 T 12-10-2018 IPR035965 PAS domain superfamily Vc3S01_A1096 7ae33e64c312264a6a4634fd9fbb6972 652 Pfam PF00989 PAS fold 363 408 3.4E-7 T 12-10-2018 IPR013767 PAS fold GO:0006355 Vc3S01_A1096 7ae33e64c312264a6a4634fd9fbb6972 652 Pfam PF13188 PAS domain 248 281 1.9E-5 T 12-10-2018 IPR000014 PAS domain Vc3S01_A1096 7ae33e64c312264a6a4634fd9fbb6972 652 Gene3D G3DSA:1.20.1480.50 147 237 3.5E-7 T 12-10-2018 Vc3S01_A1557 d470651526e9f48e5c2e23d86115f62c 283 Pfam PF13354 Beta-lactamase enzyme family 45 252 3.9E-34 T 12-10-2018 Vc3S01_A1557 d470651526e9f48e5c2e23d86115f62c 283 PRINTS PR00118 Beta-lactamase class A signature 134 158 1.1E-57 T 12-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 Vc3S01_A1557 d470651526e9f48e5c2e23d86115f62c 283 PRINTS PR00118 Beta-lactamase class A signature 98 123 1.1E-57 T 12-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 Vc3S01_A1557 d470651526e9f48e5c2e23d86115f62c 283 PRINTS PR00118 Beta-lactamase class A signature 213 228 1.1E-57 T 12-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 Vc3S01_A1557 d470651526e9f48e5c2e23d86115f62c 283 PRINTS PR00118 Beta-lactamase class A signature 160 185 1.1E-57 T 12-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 Vc3S01_A1557 d470651526e9f48e5c2e23d86115f62c 283 PRINTS PR00118 Beta-lactamase class A signature 25 49 1.1E-57 T 12-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 Vc3S01_A1557 d470651526e9f48e5c2e23d86115f62c 283 PRINTS PR00118 Beta-lactamase class A signature 196 211 1.1E-57 T 12-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 Vc3S01_A1557 d470651526e9f48e5c2e23d86115f62c 283 PRINTS PR00118 Beta-lactamase class A signature 56 73 1.1E-57 T 12-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 Vc3S01_A1557 d470651526e9f48e5c2e23d86115f62c 283 ProSitePatterns PS00146 Beta-lactamase class-A active site. 58 73 - T 12-10-2018 IPR023650 Beta-lactamase, class-A active site KEGG: 00311+3.5.2.6 Vc3S01_A1557 d470651526e9f48e5c2e23d86115f62c 283 Gene3D G3DSA:3.40.710.10 20 281 1.2E-67 T 12-10-2018 Vc3S01_A1557 d470651526e9f48e5c2e23d86115f62c 283 SUPERFAMILY SSF56601 21 281 1.25E-70 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Vc3S01_2148 91e238347a438760064d6cab85de2e02 216 TIGRFAM TIGR01102 yscR: type III secretion apparatus protein, YscR/HrcR family 10 211 4.4E-92 T 12-10-2018 IPR005773 Yop virulence translocation protein R GO:0015031|GO:0016021 Vc3S01_2148 91e238347a438760064d6cab85de2e02 216 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 144 159 - T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Vc3S01_2148 91e238347a438760064d6cab85de2e02 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 11 30 4.1E-71 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Vc3S01_2148 91e238347a438760064d6cab85de2e02 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 165 186 4.1E-71 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Vc3S01_2148 91e238347a438760064d6cab85de2e02 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 189 214 4.1E-71 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Vc3S01_2148 91e238347a438760064d6cab85de2e02 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 50 69 4.1E-71 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Vc3S01_2148 91e238347a438760064d6cab85de2e02 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 30 50 4.1E-71 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Vc3S01_2148 91e238347a438760064d6cab85de2e02 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 144 164 4.1E-71 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Vc3S01_2148 91e238347a438760064d6cab85de2e02 216 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 192 204 - T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Vc3S01_2148 91e238347a438760064d6cab85de2e02 216 Pfam PF00813 FliP family 14 211 2.2E-68 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Vc3S01_A0644 405138bbf591e86d3c2c98f2b52a7415 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 437 1.2E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_A0644 405138bbf591e86d3c2c98f2b52a7415 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 383 393 1.2E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_A0644 405138bbf591e86d3c2c98f2b52a7415 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 418 1.2E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_A0644 405138bbf591e86d3c2c98f2b52a7415 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 365 379 1.2E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_A0644 405138bbf591e86d3c2c98f2b52a7415 440 Gene3D G3DSA:3.30.565.10 297 440 2.3E-24 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_A0644 405138bbf591e86d3c2c98f2b52a7415 440 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 338 438 1.0E-13 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_A0644 405138bbf591e86d3c2c98f2b52a7415 440 Gene3D G3DSA:1.10.287.130 172 287 2.2E-19 T 12-10-2018 Vc3S01_A0644 405138bbf591e86d3c2c98f2b52a7415 440 Pfam PF00512 His Kinase A (phospho-acceptor) domain 226 283 3.1E-8 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_A0644 405138bbf591e86d3c2c98f2b52a7415 440 SMART SM00388 222 286 2.6E-5 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_A0644 405138bbf591e86d3c2c98f2b52a7415 440 SMART SM00304 168 221 1.0E-5 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Vc3S01_A0644 405138bbf591e86d3c2c98f2b52a7415 440 SUPERFAMILY SSF47384 205 285 1.96E-10 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Vc3S01_A0644 405138bbf591e86d3c2c98f2b52a7415 440 SMART SM00387 330 440 4.0E-23 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_A0644 405138bbf591e86d3c2c98f2b52a7415 440 SUPERFAMILY SSF55874 304 438 4.85E-26 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_0378 f1fc2e7a39e46f1ddb0d4fc8a2cc83bd 178 Pfam PF00436 Single-strand binding protein family 6 106 6.6E-44 T 12-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 Vc3S01_0378 f1fc2e7a39e46f1ddb0d4fc8a2cc83bd 178 Gene3D G3DSA:2.40.50.140 2 146 3.7E-53 T 12-10-2018 Vc3S01_0378 f1fc2e7a39e46f1ddb0d4fc8a2cc83bd 178 Hamap MF_00984 Single-stranded DNA-binding protein. 6 118 39.834 T 12-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 Vc3S01_0378 f1fc2e7a39e46f1ddb0d4fc8a2cc83bd 178 PIRSF PIRSF002070 2 177 3.3E-38 T 12-10-2018 Vc3S01_0378 f1fc2e7a39e46f1ddb0d4fc8a2cc83bd 178 SUPERFAMILY SSF50249 4 178 1.61E-64 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Vc3S01_0378 f1fc2e7a39e46f1ddb0d4fc8a2cc83bd 178 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 178 9.4E-63 T 12-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 Vc3S01_A1104 502e7b93e82ca9e29894ce44325375a0 127 Pfam PF11782 Protein of unknown function (DUF3319) 1 89 2.8E-43 T 12-10-2018 IPR021753 Protein of unknown function DUF3319 Vc3S01_p30023 eed4925338bccb79bd79312bf4dce62b 97 SUPERFAMILY SSF56925 11 97 2.28E-5 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel Vc3S01_A0289 8ae17f2ebb8fd9ba753f7d3902356b15 459 PIRSF PIRSF000521 151 184 47.0 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Vc3S01_A0289 8ae17f2ebb8fd9ba753f7d3902356b15 459 PIRSF PIRSF000521 16 158 1.6E-5 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Vc3S01_A0289 8ae17f2ebb8fd9ba753f7d3902356b15 459 PIRSF PIRSF000521 208 452 6.3E-19 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Vc3S01_A0289 8ae17f2ebb8fd9ba753f7d3902356b15 459 Pfam PF00202 Aminotransferase class-III 57 449 2.3E-84 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Vc3S01_A0289 8ae17f2ebb8fd9ba753f7d3902356b15 459 Gene3D G3DSA:3.90.1150.10 61 444 3.3E-117 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Vc3S01_A0289 8ae17f2ebb8fd9ba753f7d3902356b15 459 SUPERFAMILY SSF53383 57 450 1.65E-104 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Vc3S01_A0289 8ae17f2ebb8fd9ba753f7d3902356b15 459 Gene3D G3DSA:3.40.640.10 89 348 3.3E-117 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Vc3S01_A0289 8ae17f2ebb8fd9ba753f7d3902356b15 459 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 265 302 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Vc3S01_A1226 9e2dda0b0a319d6501dfe698a9cc4019 379 TIGRFAM TIGR03363 VI_chp_8: type VI secretion-associated protein, ImpA family 18 372 7.7E-77 T 12-10-2018 IPR017740 Type VI secretion system-associated, ImpA Vc3S01_A1226 9e2dda0b0a319d6501dfe698a9cc4019 379 Pfam PF06812 ImpA, N-terminal, type VI secretion system 22 150 2.2E-29 T 12-10-2018 IPR010657 ImpA, N-terminal Vc3S01_A1723 c0f9e836ca636e0ab8032873e8e94d7b 328 SUPERFAMILY SSF51604 123 321 1.17E-52 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Vc3S01_A1723 c0f9e836ca636e0ab8032873e8e94d7b 328 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 8 112 2.2E-10 T 12-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain Vc3S01_A1723 c0f9e836ca636e0ab8032873e8e94d7b 328 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 180 211 - T 12-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 Vc3S01_A1723 c0f9e836ca636e0ab8032873e8e94d7b 328 SUPERFAMILY SSF54826 2 114 1.0E-22 T 12-10-2018 Vc3S01_A1723 c0f9e836ca636e0ab8032873e8e94d7b 328 SMART SM00922 137 230 1.6E-16 T 12-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal Vc3S01_A1723 c0f9e836ca636e0ab8032873e8e94d7b 328 Gene3D G3DSA:3.30.390.10 1 112 4.2E-27 T 12-10-2018 IPR029017 Enolase-like, N-terminal Vc3S01_A1723 c0f9e836ca636e0ab8032873e8e94d7b 328 Gene3D G3DSA:3.20.20.120 122 328 1.2E-56 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Vc3S01_A1723 c0f9e836ca636e0ab8032873e8e94d7b 328 Pfam PF13378 Enolase C-terminal domain-like 140 301 1.3E-27 T 12-10-2018 IPR029065 Enolase C-terminal domain-like Vc3S01_A1216 71a27b4423a1ee4d12797eb53cd6f412 611 SUPERFAMILY SSF69279 213 368 1.63E-9 T 12-10-2018 Vc3S01_A1216 71a27b4423a1ee4d12797eb53cd6f412 611 Gene3D G3DSA:2.30.110.50 15 335 4.7E-62 T 12-10-2018 Vc3S01_A1216 71a27b4423a1ee4d12797eb53cd6f412 611 SUPERFAMILY SSF69349 450 602 2.67E-35 T 12-10-2018 Vc3S01_A1216 71a27b4423a1ee4d12797eb53cd6f412 611 Pfam PF05954 Phage late control gene D protein (GPD) 31 334 1.9E-63 T 12-10-2018 Vc3S01_A1216 71a27b4423a1ee4d12797eb53cd6f412 611 SUPERFAMILY SSF69255 372 460 3.92E-34 T 12-10-2018 Vc3S01_A1216 71a27b4423a1ee4d12797eb53cd6f412 611 Gene3D G3DSA:3.55.50.10 109 199 4.7E-62 T 12-10-2018 Vc3S01_A1216 71a27b4423a1ee4d12797eb53cd6f412 611 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 11 530 1.2E-164 T 12-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset Vc3S01_A1216 71a27b4423a1ee4d12797eb53cd6f412 611 Gene3D G3DSA:2.40.50.230 363 465 4.8E-43 T 12-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily Vc3S01_A1216 71a27b4423a1ee4d12797eb53cd6f412 611 Gene3D G3DSA:3.30.1920.30 229 293 4.7E-62 T 12-10-2018 Vc3S01_A1216 71a27b4423a1ee4d12797eb53cd6f412 611 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 24 512 1.2E-108 T 12-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein Vc3S01_A1216 71a27b4423a1ee4d12797eb53cd6f412 611 SUPERFAMILY SSF69279 12 195 9.64E-41 T 12-10-2018 Vc3S01_0459 0bd071926d2b44217d4918ac0ec13f03 541 Gene3D G3DSA:1.10.287.950 218 540 2.5E-66 T 12-10-2018 Vc3S01_0459 0bd071926d2b44217d4918ac0ec13f03 541 Pfam PF17200 Single Cache domain 2 36 185 1.3E-34 T 12-10-2018 IPR033480 Single Cache domain 2 Vc3S01_0459 0bd071926d2b44217d4918ac0ec13f03 541 Gene3D G3DSA:3.30.450.20 34 182 6.5E-31 T 12-10-2018 Vc3S01_0459 0bd071926d2b44217d4918ac0ec13f03 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 404 433 3.5E-25 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Vc3S01_0459 0bd071926d2b44217d4918ac0ec13f03 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 375 402 3.5E-25 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Vc3S01_0459 0bd071926d2b44217d4918ac0ec13f03 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 3 28 3.5E-25 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Vc3S01_0459 0bd071926d2b44217d4918ac0ec13f03 541 SMART SM00283 277 538 5.9E-72 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Vc3S01_0459 0bd071926d2b44217d4918ac0ec13f03 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 324 502 2.2E-42 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Vc3S01_0459 0bd071926d2b44217d4918ac0ec13f03 541 SMART SM01049 30 124 2.1E-20 T 12-10-2018 IPR033480 Single Cache domain 2 Vc3S01_0459 0bd071926d2b44217d4918ac0ec13f03 541 SUPERFAMILY SSF58104 250 539 1.02E-69 T 12-10-2018 Vc3S01_A1103 b8ff732e8edc1b741d95f521818056db 329 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 82 93 - T 12-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Vc3S01_A1103 b8ff732e8edc1b741d95f521818056db 329 Gene3D G3DSA:3.40.50.20 18 325 1.2E-79 T 12-10-2018 Vc3S01_A1103 b8ff732e8edc1b741d95f521818056db 329 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 271 299 - T 12-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Vc3S01_A1103 b8ff732e8edc1b741d95f521818056db 329 Pfam PF01820 D-ala D-ala ligase N-terminus 4 105 2.5E-19 T 12-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Vc3S01_A1103 b8ff732e8edc1b741d95f521818056db 329 PIRSF PIRSF039102 1 329 4.0E-77 T 12-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Vc3S01_A1103 b8ff732e8edc1b741d95f521818056db 329 SUPERFAMILY SSF52440 3 114 5.85E-27 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Vc3S01_A1103 b8ff732e8edc1b741d95f521818056db 329 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 3 329 33.309 T 12-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Vc3S01_A1103 b8ff732e8edc1b741d95f521818056db 329 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 5 328 3.1E-97 T 12-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Vc3S01_A1103 b8ff732e8edc1b741d95f521818056db 329 Gene3D G3DSA:3.30.1490.20 131 198 1.2E-79 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Vc3S01_A1103 b8ff732e8edc1b741d95f521818056db 329 SUPERFAMILY SSF56059 115 326 1.69E-44 T 12-10-2018 Vc3S01_A1103 b8ff732e8edc1b741d95f521818056db 329 Gene3D G3DSA:3.30.470.20 104 319 1.2E-79 T 12-10-2018 Vc3S01_A1103 b8ff732e8edc1b741d95f521818056db 329 Pfam PF07478 D-ala D-ala ligase C-terminus 125 325 1.6E-53 T 12-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Vc3S01_2482 f453e8f54817a11b1009036fcb1db10b 362 Gene3D G3DSA:2.40.10.410 276 362 4.5E-37 T 12-10-2018 IPR038165 FlgT, C-terminal domain superfamily Vc3S01_2482 f453e8f54817a11b1009036fcb1db10b 362 Gene3D G3DSA:3.40.50.10610 99 275 1.9E-56 T 12-10-2018 Vc3S01_2482 f453e8f54817a11b1009036fcb1db10b 362 Pfam PF16538 Flagellar assembly protein T, C-terminal domain 284 359 1.9E-27 T 12-10-2018 IPR032388 Flagellar assembly protein T, C-terminal Vc3S01_2482 f453e8f54817a11b1009036fcb1db10b 362 Pfam PF16548 Flagellar assembly protein T, N-terminal domain 9 95 5.8E-26 T 12-10-2018 IPR032370 Flagellar assembly protein T, N-terminal Vc3S01_2482 f453e8f54817a11b1009036fcb1db10b 362 Pfam PF16539 Flagellar assembly protein T, middle domain 100 241 5.6E-42 T 12-10-2018 IPR032386 Flagellar assembly protein T, middle domain Vc3S01_2482 f453e8f54817a11b1009036fcb1db10b 362 Gene3D G3DSA:3.30.1660.40 9 98 2.1E-36 T 12-10-2018 IPR038180 FlgT, N-terminal domain superfamily Vc3S01_A0067 fd6df7c737dddbbba1ae5014f9f91384 207 TIGRFAM TIGR00101 ureG: urease accessory protein UreG 9 202 4.0E-103 T 12-10-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 Vc3S01_A0067 fd6df7c737dddbbba1ae5014f9f91384 207 PIRSF PIRSF005624 2 207 1.8E-52 T 12-10-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 Vc3S01_A0067 fd6df7c737dddbbba1ae5014f9f91384 207 Gene3D G3DSA:3.40.50.300 9 205 1.4E-52 T 12-10-2018 Vc3S01_A0067 fd6df7c737dddbbba1ae5014f9f91384 207 Hamap MF_01389 Urease accessory protein UreG [ureG]. 7 205 47.37 T 12-10-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 Vc3S01_A0067 fd6df7c737dddbbba1ae5014f9f91384 207 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 11 181 1.1E-41 T 12-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain Vc3S01_A0067 fd6df7c737dddbbba1ae5014f9f91384 207 SUPERFAMILY SSF52540 6 200 1.33E-39 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A1545 19d17272810c02ac07453546446c1282 602 Gene3D G3DSA:2.30.40.10 61 574 8.6E-89 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Vc3S01_A1545 19d17272810c02ac07453546446c1282 602 Pfam PF07969 Amidohydrolase family 102 593 2.0E-52 T 12-10-2018 IPR013108 Amidohydrolase 3 Vc3S01_A1545 19d17272810c02ac07453546446c1282 602 SUPERFAMILY SSF51338 61 593 4.32E-11 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Vc3S01_A1545 19d17272810c02ac07453546446c1282 602 Gene3D G3DSA:3.20.20.140 112 558 8.6E-89 T 12-10-2018 Vc3S01_A1545 19d17272810c02ac07453546446c1282 602 Gene3D G3DSA:3.10.310.70 130 261 8.6E-89 T 12-10-2018 Vc3S01_A1545 19d17272810c02ac07453546446c1282 602 SUPERFAMILY SSF51556 111 559 8.41E-25 T 12-10-2018 IPR032466 Metal-dependent hydrolase Vc3S01_A0033 7df9610b91b057023165a693f02903e1 175 Gene3D G3DSA:3.40.1280.10 7 150 2.3E-19 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Vc3S01_A0033 7df9610b91b057023165a693f02903e1 175 SUPERFAMILY SSF75217 5 146 3.09E-28 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases Vc3S01_A0033 7df9610b91b057023165a693f02903e1 175 Pfam PF00588 SpoU rRNA Methylase family 7 140 2.7E-19 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 Vc3S01_A1630 c8aac99285964c886b77a22e2878a111 79 Gene3D G3DSA:1.20.58.660 11 79 7.0E-15 T 12-10-2018 Vc3S01_A1630 c8aac99285964c886b77a22e2878a111 79 Pfam PF04325 Protein of unknown function (DUF465) 29 73 2.1E-11 T 12-10-2018 IPR007420 Protein of unknown function DUF465 Vc3S01_1591 55aabdd42ce1576aad41ab1eba393102 626 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 4 56 1.4E-11 T 12-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 Vc3S01_1591 55aabdd42ce1576aad41ab1eba393102 626 SUPERFAMILY SSF56801 3 614 1.28E-152 T 12-10-2018 Vc3S01_1591 55aabdd42ce1576aad41ab1eba393102 626 Gene3D G3DSA:3.40.50.12780 12 494 6.1E-101 T 12-10-2018 Vc3S01_1591 55aabdd42ce1576aad41ab1eba393102 626 ProSitePatterns PS00455 Putative AMP-binding domain signature. 237 248 - T 12-10-2018 IPR020845 AMP-binding, conserved site Vc3S01_1591 55aabdd42ce1576aad41ab1eba393102 626 Pfam PF13193 AMP-binding enzyme C-terminal domain 510 589 2.4E-25 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Vc3S01_1591 55aabdd42ce1576aad41ab1eba393102 626 Gene3D G3DSA:3.30.300.30 497 625 1.3E-23 T 12-10-2018 Vc3S01_1591 55aabdd42ce1576aad41ab1eba393102 626 Pfam PF00501 AMP-binding enzyme 66 501 3.3E-81 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Vc3S01_2725 f3d89872e38e15f560c1943cdbc0b0ca 510 SUPERFAMILY SSF55681 161 507 2.4E-117 T 12-10-2018 Vc3S01_2725 f3d89872e38e15f560c1943cdbc0b0ca 510 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 24 509 43.151 T 12-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Vc3S01_2725 f3d89872e38e15f560c1943cdbc0b0ca 510 Pfam PF00152 tRNA synthetases class II (D, K and N) 161 506 3.6E-80 T 12-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Vc3S01_2725 f3d89872e38e15f560c1943cdbc0b0ca 510 SUPERFAMILY SSF50249 16 154 3.67E-33 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Vc3S01_2725 f3d89872e38e15f560c1943cdbc0b0ca 510 Gene3D G3DSA:3.30.930.10 156 506 4.8E-130 T 12-10-2018 Vc3S01_2725 f3d89872e38e15f560c1943cdbc0b0ca 510 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 19 509 1.5E-199 T 12-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Vc3S01_2725 f3d89872e38e15f560c1943cdbc0b0ca 510 Pfam PF01336 OB-fold nucleic acid binding domain 73 145 1.1E-7 T 12-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 Vc3S01_2725 f3d89872e38e15f560c1943cdbc0b0ca 510 Gene3D G3DSA:2.40.50.140 10 155 1.5E-28 T 12-10-2018 Vc3S01_2725 f3d89872e38e15f560c1943cdbc0b0ca 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 391 407 1.2E-37 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Vc3S01_2725 f3d89872e38e15f560c1943cdbc0b0ca 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 243 256 1.2E-37 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Vc3S01_2725 f3d89872e38e15f560c1943cdbc0b0ca 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 198 208 1.2E-37 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Vc3S01_2725 f3d89872e38e15f560c1943cdbc0b0ca 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 214 230 1.2E-37 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Vc3S01_2725 f3d89872e38e15f560c1943cdbc0b0ca 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 261 278 1.2E-37 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Vc3S01_0723 69cde2ab0ea7b29fc969698c39374d83 1157 SUPERFAMILY SSF52980 838 1142 1.13E-76 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Vc3S01_0723 69cde2ab0ea7b29fc969698c39374d83 1157 Gene3D G3DSA:1.10.486.10 457 669 4.7E-194 T 12-10-2018 Vc3S01_0723 69cde2ab0ea7b29fc969698c39374d83 1157 SUPERFAMILY SSF52540 371 816 8.39E-103 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0723 69cde2ab0ea7b29fc969698c39374d83 1157 PIRSF PIRSF000980 1 1155 0.0 T 12-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 Vc3S01_0723 69cde2ab0ea7b29fc969698c39374d83 1157 Gene3D G3DSA:3.40.50.300 339 811 4.7E-194 T 12-10-2018 Vc3S01_0723 69cde2ab0ea7b29fc969698c39374d83 1157 SUPERFAMILY SSF52540 2 351 7.43E-125 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0723 69cde2ab0ea7b29fc969698c39374d83 1157 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 2 810 0.0 T 12-10-2018 Vc3S01_0723 69cde2ab0ea7b29fc969698c39374d83 1157 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1149 21.047 T 12-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 Vc3S01_0723 69cde2ab0ea7b29fc969698c39374d83 1157 Gene3D G3DSA:1.10.10.160 79 187 1.0E-126 T 12-10-2018 IPR013986 DExx box DNA helicase domain superfamily Vc3S01_0723 69cde2ab0ea7b29fc969698c39374d83 1157 Gene3D G3DSA:1.10.10.990 878 956 1.9E-21 T 12-10-2018 Vc3S01_0723 69cde2ab0ea7b29fc969698c39374d83 1157 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 1117 0.0 T 12-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 Vc3S01_0723 69cde2ab0ea7b29fc969698c39374d83 1157 Gene3D G3DSA:3.40.50.10930 4 321 1.0E-126 T 12-10-2018 Vc3S01_2414 3d899138f32cc076a985f1304ffaf246 524 Pfam PF02378 Phosphotransferase system, EIIC 11 353 2.1E-65 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 Vc3S01_2414 3d899138f32cc076a985f1304ffaf246 524 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 452 469 - T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 Vc3S01_2414 3d899138f32cc076a985f1304ffaf246 524 SUPERFAMILY SSF55604 439 511 5.23E-20 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 Vc3S01_2414 3d899138f32cc076a985f1304ffaf246 524 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 3 510 3.7E-210 T 12-10-2018 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 Vc3S01_2414 3d899138f32cc076a985f1304ffaf246 524 Pfam PF00367 phosphotransferase system, EIIB 441 474 2.9E-13 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 Vc3S01_2414 3d899138f32cc076a985f1304ffaf246 524 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 411 499 5.7E-22 T 12-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 Vc3S01_2414 3d899138f32cc076a985f1304ffaf246 524 Gene3D G3DSA:3.30.1360.60 435 513 8.8E-25 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 Vc3S01_2739 a6939130168774e1ccdff8c2d1b34ee1 226 Gene3D G3DSA:3.40.470.10 2 225 1.1E-104 T 12-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Vc3S01_2739 a6939130168774e1ccdff8c2d1b34ee1 226 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 57 66 - T 12-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Vc3S01_2739 a6939130168774e1ccdff8c2d1b34ee1 226 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 6 214 1.2E-86 T 12-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Vc3S01_2739 a6939130168774e1ccdff8c2d1b34ee1 226 SUPERFAMILY SSF52141 5 222 1.31E-96 T 12-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Vc3S01_2739 a6939130168774e1ccdff8c2d1b34ee1 226 SMART SM00986 49 210 1.4E-39 T 12-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Vc3S01_2739 a6939130168774e1ccdff8c2d1b34ee1 226 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 4 221 40.108 T 12-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Vc3S01_2739 a6939130168774e1ccdff8c2d1b34ee1 226 SMART SM00987 49 210 1.4E-39 T 12-10-2018 Vc3S01_2739 a6939130168774e1ccdff8c2d1b34ee1 226 Pfam PF03167 Uracil DNA glycosylase superfamily 54 209 2.0E-26 T 12-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Vc3S01_A1494 c4040b71426be558bce7f1526443ae10 341 Gene3D G3DSA:2.40.160.10 22 341 1.9E-52 T 12-10-2018 IPR023614 Porin domain superfamily Vc3S01_A1494 c4040b71426be558bce7f1526443ae10 341 SUPERFAMILY SSF56935 22 340 6.28E-53 T 12-10-2018 Vc3S01_A1494 c4040b71426be558bce7f1526443ae10 341 Pfam PF13609 Gram-negative porin 8 324 7.2E-16 T 12-10-2018 Vc3S01_A1494 c4040b71426be558bce7f1526443ae10 341 PRINTS PR00183 E.coli/Salmonella-type porin signature 93 115 7.0E-6 T 12-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 Vc3S01_A1494 c4040b71426be558bce7f1526443ae10 341 PRINTS PR00183 E.coli/Salmonella-type porin signature 149 171 7.0E-6 T 12-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 Vc3S01_A1494 c4040b71426be558bce7f1526443ae10 341 PRINTS PR00183 E.coli/Salmonella-type porin signature 305 324 7.0E-6 T 12-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 Vc3S01_A1494 c4040b71426be558bce7f1526443ae10 341 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 7.0E-6 T 12-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 Vc3S01_1499 1948c2d67d69338b1eb8f6c0d32310c8 177 Pfam PF00583 Acetyltransferase (GNAT) family 56 142 2.0E-15 T 12-10-2018 IPR000182 GNAT domain Vc3S01_1499 1948c2d67d69338b1eb8f6c0d32310c8 177 SUPERFAMILY SSF55729 20 174 2.92E-18 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_1499 1948c2d67d69338b1eb8f6c0d32310c8 177 TIGRFAM TIGR02406 ectoine_EctA: diaminobutyrate acetyltransferase 23 176 1.7E-61 T 12-10-2018 IPR012772 L-2,4-diaminobutyric acid acetyltransferase GO:0019491|GO:0033816 KEGG: 00260+2.3.1.178 Vc3S01_1499 1948c2d67d69338b1eb8f6c0d32310c8 177 Gene3D G3DSA:3.40.630.30 20 177 2.1E-40 T 12-10-2018 Vc3S01_A1531 4011304144f2901a973d3d7692c64bfc 348 Pfam PF10282 Lactonase, 7-bladed beta-propeller 9 345 1.0E-91 T 12-10-2018 IPR019405 Lactonase, 7-bladed beta propeller Vc3S01_A1531 4011304144f2901a973d3d7692c64bfc 348 Gene3D G3DSA:2.130.10.10 2 346 1.6E-89 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Vc3S01_A1531 4011304144f2901a973d3d7692c64bfc 348 SUPERFAMILY SSF51004 30 330 3.92E-28 T 12-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily Vc3S01_2064 94972bc46ee48b68261a7d36a7692574 181 Pfam PF16036 Chalcone isomerase-like 42 178 4.8E-8 T 12-10-2018 IPR016087 Chalcone isomerase GO:0016872 Vc3S01_2064 94972bc46ee48b68261a7d36a7692574 181 SUPERFAMILY SSF54626 66 179 1.19E-5 T 12-10-2018 IPR036298 Chalcone isomerase superfamily GO:0016872 Vc3S01_A0952 a069a8290349349d2a9968a2e3e4ff3f 278 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_A0952 a069a8290349349d2a9968a2e3e4ff3f 278 Pfam PF00005 ABC transporter 25 166 1.8E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_A0952 a069a8290349349d2a9968a2e3e4ff3f 278 SMART SM00382 34 216 2.0E-18 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_A0952 a069a8290349349d2a9968a2e3e4ff3f 278 Gene3D G3DSA:3.40.50.300 3 277 6.6E-63 T 12-10-2018 Vc3S01_A0952 a069a8290349349d2a9968a2e3e4ff3f 278 SUPERFAMILY SSF52540 6 227 5.96E-69 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A0952 a069a8290349349d2a9968a2e3e4ff3f 278 TIGRFAM TIGR01184 ntrCD: nitrate ABC transporter, ATP-binding proteins C and D 25 254 4.0E-106 T 12-10-2018 IPR005890 Nitrate transport ATP-binding subunit C/D GO:0015112|GO:0015706|GO:0016020 Vc3S01_A0216 be4cdad78833441c81f5ae035191afec 390 Gene3D G3DSA:1.25.40.10 16 128 1.1E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_A0216 be4cdad78833441c81f5ae035191afec 390 Gene3D G3DSA:1.25.40.10 129 275 1.5E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_A0216 be4cdad78833441c81f5ae035191afec 390 SUPERFAMILY SSF48452 244 368 6.5E-9 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_A0216 be4cdad78833441c81f5ae035191afec 390 Gene3D G3DSA:1.25.40.10 276 390 1.3E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_A0216 be4cdad78833441c81f5ae035191afec 390 SUPERFAMILY SSF48452 29 232 3.48E-11 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_2217 8afa9619289ca5970359e577e821a6dc 237 SMART SM00862 158 234 3.4E-19 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Vc3S01_2217 8afa9619289ca5970359e577e821a6dc 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 234 2.1E-20 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Vc3S01_2217 8afa9619289ca5970359e577e821a6dc 237 SUPERFAMILY SSF46894 134 235 1.45E-26 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Vc3S01_2217 8afa9619289ca5970359e577e821a6dc 237 Gene3D G3DSA:3.40.50.2300 1 136 9.8E-34 T 12-10-2018 Vc3S01_2217 8afa9619289ca5970359e577e821a6dc 237 SMART SM00448 3 113 8.6E-37 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_2217 8afa9619289ca5970359e577e821a6dc 237 Pfam PF00072 Response regulator receiver domain 5 113 2.5E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_2217 8afa9619289ca5970359e577e821a6dc 237 Gene3D G3DSA:1.10.10.10 137 237 4.5E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_2217 8afa9619289ca5970359e577e821a6dc 237 SUPERFAMILY SSF52172 2 124 1.38E-36 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_2413 422c74f3759d79ac08a3a1df4f02517d 556 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 28 337 1.6E-126 T 12-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 Vc3S01_2413 422c74f3759d79ac08a3a1df4f02517d 556 Gene3D G3DSA:2.40.240.10 348 463 8.1E-47 T 12-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Vc3S01_2413 422c74f3759d79ac08a3a1df4f02517d 556 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 340 529 2.2E-63 T 12-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Vc3S01_2413 422c74f3759d79ac08a3a1df4f02517d 556 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 550 54.053 T 12-10-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 Vc3S01_2413 422c74f3759d79ac08a3a1df4f02517d 556 Gene3D G3DSA:1.10.1160.10 261 339 1.0E-35 T 12-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 Vc3S01_2413 422c74f3759d79ac08a3a1df4f02517d 556 SUPERFAMILY SSF52374 11 337 1.69E-103 T 12-10-2018 Vc3S01_2413 422c74f3759d79ac08a3a1df4f02517d 556 Gene3D G3DSA:3.40.50.620 30 247 6.0E-106 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Vc3S01_2413 422c74f3759d79ac08a3a1df4f02517d 556 Gene3D G3DSA:3.90.800.10 101 209 6.0E-106 T 12-10-2018 Vc3S01_2413 422c74f3759d79ac08a3a1df4f02517d 556 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 45 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Vc3S01_2413 422c74f3759d79ac08a3a1df4f02517d 556 Gene3D G3DSA:2.40.240.10 464 548 1.6E-33 T 12-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Vc3S01_2413 422c74f3759d79ac08a3a1df4f02517d 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 60 73 6.0E-10 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Vc3S01_2413 422c74f3759d79ac08a3a1df4f02517d 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 43 6.0E-10 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Vc3S01_2413 422c74f3759d79ac08a3a1df4f02517d 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 45 56 6.0E-10 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Vc3S01_2413 422c74f3759d79ac08a3a1df4f02517d 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 220 6.0E-10 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Vc3S01_2413 422c74f3759d79ac08a3a1df4f02517d 556 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 28 552 4.2E-298 T 12-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Vc3S01_2413 422c74f3759d79ac08a3a1df4f02517d 556 SUPERFAMILY SSF50715 340 548 9.42E-80 T 12-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Vc3S01_2850 d02ba606d425598ee2f5945319bff48a 574 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 433 452 - T 12-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 Vc3S01_2850 d02ba606d425598ee2f5945319bff48a 574 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 198 331 4.9E-46 T 12-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 Vc3S01_2850 d02ba606d425598ee2f5945319bff48a 574 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 5 569 5.2E-272 T 12-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 Vc3S01_2850 d02ba606d425598ee2f5945319bff48a 574 SUPERFAMILY SSF52467 191 364 6.36E-63 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Vc3S01_2850 d02ba606d425598ee2f5945319bff48a 574 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 396 545 3.7E-50 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Vc3S01_2850 d02ba606d425598ee2f5945319bff48a 574 Gene3D G3DSA:3.40.50.970 1 183 6.2E-73 T 12-10-2018 Vc3S01_2850 d02ba606d425598ee2f5945319bff48a 574 SUPERFAMILY SSF52518 2 181 4.05E-64 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold Vc3S01_2850 d02ba606d425598ee2f5945319bff48a 574 SUPERFAMILY SSF52518 373 567 5.33E-68 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold Vc3S01_2850 d02ba606d425598ee2f5945319bff48a 574 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 6 173 4.4E-58 T 12-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 Vc3S01_2850 d02ba606d425598ee2f5945319bff48a 574 Gene3D G3DSA:3.40.50.1220 192 362 8.5E-60 T 12-10-2018 Vc3S01_2850 d02ba606d425598ee2f5945319bff48a 574 Gene3D G3DSA:3.40.50.970 366 574 1.8E-65 T 12-10-2018 Vc3S01_0440 691f9bd4eec11182c7cbe0f5a7eeac53 952 SUPERFAMILY SSF47323 642 899 5.98E-66 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Vc3S01_0440 691f9bd4eec11182c7cbe0f5a7eeac53 952 SUPERFAMILY SSF46589 885 948 8.37E-18 T 12-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 Vc3S01_0440 691f9bd4eec11182c7cbe0f5a7eeac53 952 Pfam PF08264 Anticodon-binding domain of tRNA 674 826 5.1E-39 T 12-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 Vc3S01_0440 691f9bd4eec11182c7cbe0f5a7eeac53 952 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 885 945 3.1E-18 T 12-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 Vc3S01_0440 691f9bd4eec11182c7cbe0f5a7eeac53 952 SUPERFAMILY SSF52374 1 641 7.37E-136 T 12-10-2018 Vc3S01_0440 691f9bd4eec11182c7cbe0f5a7eeac53 952 PRINTS PR00986 Valyl-tRNA synthetase signature 236 253 1.4E-34 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Vc3S01_0440 691f9bd4eec11182c7cbe0f5a7eeac53 952 PRINTS PR00986 Valyl-tRNA synthetase signature 469 490 1.4E-34 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Vc3S01_0440 691f9bd4eec11182c7cbe0f5a7eeac53 952 PRINTS PR00986 Valyl-tRNA synthetase signature 500 518 1.4E-34 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Vc3S01_0440 691f9bd4eec11182c7cbe0f5a7eeac53 952 PRINTS PR00986 Valyl-tRNA synthetase signature 35 46 1.4E-34 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Vc3S01_0440 691f9bd4eec11182c7cbe0f5a7eeac53 952 PRINTS PR00986 Valyl-tRNA synthetase signature 369 382 1.4E-34 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Vc3S01_0440 691f9bd4eec11182c7cbe0f5a7eeac53 952 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 950 16.059 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Vc3S01_0440 691f9bd4eec11182c7cbe0f5a7eeac53 952 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 631 3.6E-226 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Vc3S01_0440 691f9bd4eec11182c7cbe0f5a7eeac53 952 Gene3D G3DSA:1.10.287.380 878 949 4.1E-19 T 12-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 Vc3S01_0440 691f9bd4eec11182c7cbe0f5a7eeac53 952 TIGRFAM TIGR00422 valS: valine--tRNA ligase 1 933 0.0 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Vc3S01_0440 691f9bd4eec11182c7cbe0f5a7eeac53 952 SUPERFAMILY SSF50677 191 365 8.63E-59 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Vc3S01_0440 691f9bd4eec11182c7cbe0f5a7eeac53 952 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Vc3S01_1040 6cff6f1a4b22c66af1acfff4d8f08130 192 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 2.4E-61 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 Vc3S01_1040 6cff6f1a4b22c66af1acfff4d8f08130 192 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 2.4E-89 T 12-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 Vc3S01_1040 6cff6f1a4b22c66af1acfff4d8f08130 192 PIRSF PIRSF006102 1 192 7.7E-64 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 Vc3S01_1040 6cff6f1a4b22c66af1acfff4d8f08130 192 Hamap MF_00459 Ion-translocating oxidoreductase complex subunit A [rsxA]. 2 191 26.233 T 12-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 Vc3S01_A0618 20304d3b978ef24018366e02f05f66d0 425 Pfam PF07969 Amidohydrolase family 42 403 1.8E-53 T 12-10-2018 IPR013108 Amidohydrolase 3 Vc3S01_A0618 20304d3b978ef24018366e02f05f66d0 425 SUPERFAMILY SSF51556 54 372 9.64E-106 T 12-10-2018 IPR032466 Metal-dependent hydrolase Vc3S01_A0618 20304d3b978ef24018366e02f05f66d0 425 SUPERFAMILY SSF51338 1 76 2.94E-7 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Vc3S01_A0618 20304d3b978ef24018366e02f05f66d0 425 Gene3D G3DSA:3.20.20.140 55 362 7.2E-178 T 12-10-2018 Vc3S01_A0618 20304d3b978ef24018366e02f05f66d0 425 Gene3D G3DSA:2.30.40.10 8 409 7.2E-178 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Vc3S01_0316 d5c295e9e976409766f42f3e4ffff8fe 338 PIRSF PIRSF019169 1 328 4.4E-90 T 12-10-2018 IPR005883 Type IV pilus assembly protein PilM Vc3S01_0316 d5c295e9e976409766f42f3e4ffff8fe 338 Gene3D G3DSA:3.30.1490.300 82 141 2.0E-45 T 12-10-2018 Vc3S01_0316 d5c295e9e976409766f42f3e4ffff8fe 338 Gene3D G3DSA:3.30.420.40 182 292 2.0E-45 T 12-10-2018 Vc3S01_0316 d5c295e9e976409766f42f3e4ffff8fe 338 Gene3D G3DSA:3.30.420.40 8 325 2.0E-45 T 12-10-2018 Vc3S01_0316 d5c295e9e976409766f42f3e4ffff8fe 338 Pfam PF11104 Type IV pilus assembly protein PilM; 8 326 1.2E-50 T 12-10-2018 IPR005883 Type IV pilus assembly protein PilM Vc3S01_0316 d5c295e9e976409766f42f3e4ffff8fe 338 SUPERFAMILY SSF53067 5 165 2.74E-8 T 12-10-2018 Vc3S01_0316 d5c295e9e976409766f42f3e4ffff8fe 338 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 5 327 2.7E-74 T 12-10-2018 IPR005883 Type IV pilus assembly protein PilM Vc3S01_0316 d5c295e9e976409766f42f3e4ffff8fe 338 SMART SM00842 6 169 0.005 T 12-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 Vc3S01_0684 638c287356041bcffca67b211960762d 379 TIGRFAM TIGR00937 2A51: chromate efflux transporter 8 369 4.8E-90 T 12-10-2018 IPR014047 Chromate transporter, long chain Vc3S01_0684 638c287356041bcffca67b211960762d 379 PIRSF PIRSF004810 1 379 6.4E-114 T 12-10-2018 IPR014047 Chromate transporter, long chain Vc3S01_0684 638c287356041bcffca67b211960762d 379 Pfam PF02417 Chromate transporter 212 373 5.2E-34 T 12-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 Vc3S01_0684 638c287356041bcffca67b211960762d 379 Pfam PF02417 Chromate transporter 3 168 1.6E-33 T 12-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 Vc3S01_A0542 2dc3153e1938b9c26551b879ac6e5f9c 209 SUPERFAMILY SSF46689 160 207 1.61E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_A0542 2dc3153e1938b9c26551b879ac6e5f9c 209 SUPERFAMILY SSF51182 4 132 5.78E-5 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily Vc3S01_A0542 2dc3153e1938b9c26551b879ac6e5f9c 209 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 189 205 3.6E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Vc3S01_A0542 2dc3153e1938b9c26551b879ac6e5f9c 209 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 174 189 3.6E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Vc3S01_A0542 2dc3153e1938b9c26551b879ac6e5f9c 209 Pfam PF12833 Helix-turn-helix domain 129 207 4.0E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_A0542 2dc3153e1938b9c26551b879ac6e5f9c 209 Gene3D G3DSA:1.10.10.60 103 208 2.9E-23 T 12-10-2018 Vc3S01_A0542 2dc3153e1938b9c26551b879ac6e5f9c 209 SUPERFAMILY SSF46689 106 157 4.12E-5 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_A0542 2dc3153e1938b9c26551b879ac6e5f9c 209 SMART SM00342 123 205 9.8E-23 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_0962 aeed732997a7caa3e593246c3949de0d 307 PRINTS PR01270 Histone deacetylase superfamily signature 155 170 8.9E-17 T 12-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Vc3S01_0962 aeed732997a7caa3e593246c3949de0d 307 PRINTS PR01270 Histone deacetylase superfamily signature 229 239 8.9E-17 T 12-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Vc3S01_0962 aeed732997a7caa3e593246c3949de0d 307 PRINTS PR01270 Histone deacetylase superfamily signature 121 144 8.9E-17 T 12-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Vc3S01_0962 aeed732997a7caa3e593246c3949de0d 307 Pfam PF00850 Histone deacetylase domain 31 286 5.2E-52 T 12-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Vc3S01_0962 aeed732997a7caa3e593246c3949de0d 307 SUPERFAMILY SSF52768 3 285 9.11E-82 T 12-10-2018 IPR023696 Ureohydrolase domain superfamily Vc3S01_0962 aeed732997a7caa3e593246c3949de0d 307 Gene3D G3DSA:3.40.800.20 2 302 1.6E-67 T 12-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Vc3S01_2884 e17ea4d0a18d9afb8190f80e257d9645 330 TIGRFAM TIGR01276 thiB: thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein 14 329 1.5E-146 T 12-10-2018 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria GO:0015888|GO:0030288|GO:0030975 Vc3S01_2884 e17ea4d0a18d9afb8190f80e257d9645 330 SUPERFAMILY SSF53850 24 325 1.7E-69 T 12-10-2018 Vc3S01_2884 e17ea4d0a18d9afb8190f80e257d9645 330 Gene3D G3DSA:3.40.190.10 26 300 2.6E-118 T 12-10-2018 Vc3S01_2884 e17ea4d0a18d9afb8190f80e257d9645 330 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 21 324 3.2E-144 T 12-10-2018 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter GO:0015888|GO:0030975 Vc3S01_2884 e17ea4d0a18d9afb8190f80e257d9645 330 Pfam PF13343 Bacterial extracellular solute-binding protein 76 287 6.6E-21 T 12-10-2018 Vc3S01_2884 e17ea4d0a18d9afb8190f80e257d9645 330 Gene3D G3DSA:3.40.190.10 126 325 2.6E-118 T 12-10-2018 Vc3S01_0276 5b77923be44ed485138fd94cd910a8a5 335 Gene3D G3DSA:3.40.50.1820 34 312 4.6E-25 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_0276 5b77923be44ed485138fd94cd910a8a5 335 PIRSF PIRSF005211 1 329 2.5E-105 T 12-10-2018 IPR012020 AB hydrolase 4 family Vc3S01_0276 5b77923be44ed485138fd94cd910a8a5 335 Pfam PF00561 alpha/beta hydrolase fold 61 301 1.4E-19 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Vc3S01_0276 5b77923be44ed485138fd94cd910a8a5 335 SUPERFAMILY SSF53474 32 299 5.13E-39 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_0276 5b77923be44ed485138fd94cd910a8a5 335 ProSitePatterns PS01133 Uncharacterized protein family UPF0017 signature. 227 268 - T 12-10-2018 IPR000952 AB hydrolase 4, conserved site Vc3S01_A1608 4690cbec387565950d4cc7ef8133b92c 389 Gene3D G3DSA:3.40.710.10 14 278 7.1E-89 T 12-10-2018 Vc3S01_A1608 4690cbec387565950d4cc7ef8133b92c 389 SUPERFAMILY SSF69189 280 372 1.04E-25 T 12-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Vc3S01_A1608 4690cbec387565950d4cc7ef8133b92c 389 SUPERFAMILY SSF56601 11 280 4.64E-84 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Vc3S01_A1608 4690cbec387565950d4cc7ef8133b92c 389 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 30 260 3.1E-83 T 12-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 Vc3S01_A1608 4690cbec387565950d4cc7ef8133b92c 389 Gene3D G3DSA:2.60.410.10 280 370 2.6E-28 T 12-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Vc3S01_A1608 4690cbec387565950d4cc7ef8133b92c 389 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 280 369 3.4E-24 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Vc3S01_A1608 4690cbec387565950d4cc7ef8133b92c 389 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 119 136 8.0E-18 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Vc3S01_A1608 4690cbec387565950d4cc7ef8133b92c 389 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 146 159 8.0E-18 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Vc3S01_A1608 4690cbec387565950d4cc7ef8133b92c 389 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 63 74 8.0E-18 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Vc3S01_A1608 4690cbec387565950d4cc7ef8133b92c 389 SMART SM00936 280 370 3.6E-31 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Vc3S01_2628 4bdddad6c8fdb553293a672f61f67d56 204 SUPERFAMILY SSF48452 89 188 1.25E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_2628 4bdddad6c8fdb553293a672f61f67d56 204 Gene3D G3DSA:1.25.40.10 26 203 2.5E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_2628 4bdddad6c8fdb553293a672f61f67d56 204 Pfam PF09976 Tetratricopeptide repeat-like domain 15 204 5.4E-56 T 12-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 Vc3S01_2628 4bdddad6c8fdb553293a672f61f67d56 204 PIRSF PIRSF006170 1 204 3.4E-53 T 12-10-2018 IPR026039 Uncharacterised protein family UPF0070 Vc3S01_1617 5db22fe748211e4a84b1b366af6b3c43 401 SUPERFAMILY SSF161098 194 382 1.83E-23 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_1617 5db22fe748211e4a84b1b366af6b3c43 401 SUPERFAMILY SSF161098 91 160 8.9E-12 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_1617 5db22fe748211e4a84b1b366af6b3c43 401 Gene3D G3DSA:1.10.3720.10 79 187 2.1E-15 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_1617 5db22fe748211e4a84b1b366af6b3c43 401 Gene3D G3DSA:1.10.3720.10 190 397 6.6E-32 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_1617 5db22fe748211e4a84b1b366af6b3c43 401 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 228 396 2.4E-12 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Vc3S01_1617 5db22fe748211e4a84b1b366af6b3c43 401 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 92 155 3.9E-17 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Vc3S01_p30097 8fafa45a7768165e39ecb5ebe7a50293 215 SUPERFAMILY SSF101082 23 206 3.01E-20 T 12-10-2018 Vc3S01_p30097 8fafa45a7768165e39ecb5ebe7a50293 215 Pfam PF07996 Type IV secretion system proteins 23 203 9.5E-20 T 12-10-2018 IPR014158 Type IV secretion system, VirB5 Vc3S01_p30097 8fafa45a7768165e39ecb5ebe7a50293 215 Gene3D G3DSA:1.20.58.430 23 207 3.3E-10 T 12-10-2018 IPR023220 Type IV secretion system, VirB5-domain Vc3S01_A0377 03bfd00199b7547fd691bd680d8230a1 311 Pfam PF03466 LysR substrate binding domain 100 306 2.1E-24 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_A0377 03bfd00199b7547fd691bd680d8230a1 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 54 65 2.8E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A0377 03bfd00199b7547fd691bd680d8230a1 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 44 2.8E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A0377 03bfd00199b7547fd691bd680d8230a1 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 54 2.8E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A0377 03bfd00199b7547fd691bd680d8230a1 311 Gene3D G3DSA:3.40.190.10 113 302 4.0E-35 T 12-10-2018 Vc3S01_A0377 03bfd00199b7547fd691bd680d8230a1 311 Gene3D G3DSA:3.40.190.10 174 275 4.0E-35 T 12-10-2018 Vc3S01_A0377 03bfd00199b7547fd691bd680d8230a1 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 19 76 2.5E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A0377 03bfd00199b7547fd691bd680d8230a1 311 SUPERFAMILY SSF53850 102 309 1.54E-27 T 12-10-2018 Vc3S01_A0377 03bfd00199b7547fd691bd680d8230a1 311 Gene3D G3DSA:1.10.10.10 16 99 4.3E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A0377 03bfd00199b7547fd691bd680d8230a1 311 SUPERFAMILY SSF46785 12 95 4.79E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_2141 4565f311618d25a41d94adf919bc7132 124 SUPERFAMILY SSF69635 2 121 1.41E-45 T 12-10-2018 Vc3S01_2141 4565f311618d25a41d94adf919bc7132 124 TIGRFAM TIGR02503 type_III_SycN: type III secretion chaperone SycN 4 121 2.7E-51 T 12-10-2018 IPR012673 Type III secretion system chaperone SycN GO:0009306 Vc3S01_2141 4565f311618d25a41d94adf919bc7132 124 Gene3D G3DSA:3.30.1460.10 1 124 8.2E-44 T 12-10-2018 Vc3S01_2925 66bf604a6395b32ef031fc55bd014857 167 Gene3D G3DSA:3.30.160.20 2 73 1.2E-31 T 12-10-2018 Vc3S01_2925 66bf604a6395b32ef031fc55bd014857 167 Pfam PF00333 Ribosomal protein S5, N-terminal domain 12 75 6.1E-29 T 12-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 Vc3S01_2925 66bf604a6395b32ef031fc55bd014857 167 SUPERFAMILY SSF54768 8 76 5.86E-24 T 12-10-2018 Vc3S01_2925 66bf604a6395b32ef031fc55bd014857 167 SUPERFAMILY SSF54211 80 159 4.05E-27 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Vc3S01_2925 66bf604a6395b32ef031fc55bd014857 167 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 163 3.0E-69 T 12-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 Vc3S01_2925 66bf604a6395b32ef031fc55bd014857 167 ProSitePatterns PS00585 Ribosomal protein S5 signature. 29 61 - T 12-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site Vc3S01_2925 66bf604a6395b32ef031fc55bd014857 167 Pfam PF03719 Ribosomal protein S5, C-terminal domain 88 158 2.6E-30 T 12-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 Vc3S01_2925 66bf604a6395b32ef031fc55bd014857 167 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 164 34.556 T 12-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 Vc3S01_2925 66bf604a6395b32ef031fc55bd014857 167 Gene3D G3DSA:3.30.230.10 75 167 6.2E-37 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Vc3S01_3074 7da061517edd413d9dd428d4bc689c8b 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 12-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Vc3S01_3074 7da061517edd413d9dd428d4bc689c8b 469 SUPERFAMILY SSF55931 102 468 9.81E-138 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Vc3S01_3074 7da061517edd413d9dd428d4bc689c8b 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 12-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Vc3S01_3074 7da061517edd413d9dd428d4bc689c8b 469 Gene3D G3DSA:3.10.20.70 2 104 1.7E-40 T 12-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Vc3S01_3074 7da061517edd413d9dd428d4bc689c8b 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 12-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Vc3S01_3074 7da061517edd413d9dd428d4bc689c8b 469 SMART SM01230 102 379 1.0E-153 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Vc3S01_3074 7da061517edd413d9dd428d4bc689c8b 469 Gene3D G3DSA:3.30.590.10 105 457 6.6E-149 T 12-10-2018 Vc3S01_3074 7da061517edd413d9dd428d4bc689c8b 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 468 7.0E-212 T 12-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Vc3S01_3074 7da061517edd413d9dd428d4bc689c8b 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 9.0E-31 T 12-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Vc3S01_3074 7da061517edd413d9dd428d4bc689c8b 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 3.3E-138 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Vc3S01_3074 7da061517edd413d9dd428d4bc689c8b 469 SUPERFAMILY SSF54368 3 100 5.89E-36 T 12-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Vc3S01_0077 fdc6fe1d4c183db92eadec62c5825b0d 476 Gene3D G3DSA:1.10.3210.10 285 475 2.4E-44 T 12-10-2018 Vc3S01_0077 fdc6fe1d4c183db92eadec62c5825b0d 476 Gene3D G3DSA:3.30.420.150 93 270 4.5E-73 T 12-10-2018 Vc3S01_0077 fdc6fe1d4c183db92eadec62c5825b0d 476 SUPERFAMILY SSF53067 1 108 6.02E-26 T 12-10-2018 Vc3S01_0077 fdc6fe1d4c183db92eadec62c5825b0d 476 SUPERFAMILY SSF53067 113 284 1.37E-42 T 12-10-2018 Vc3S01_0077 fdc6fe1d4c183db92eadec62c5825b0d 476 Gene3D G3DSA:3.30.420.40 1 278 4.5E-73 T 12-10-2018 Vc3S01_0077 fdc6fe1d4c183db92eadec62c5825b0d 476 Pfam PF02541 Ppx/GppA phosphatase family 2 282 2.0E-87 T 12-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 Vc3S01_0077 fdc6fe1d4c183db92eadec62c5825b0d 476 PIRSF PIRSF001267 1 475 1.9E-165 T 12-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 Vc3S01_0077 fdc6fe1d4c183db92eadec62c5825b0d 476 SUPERFAMILY SSF109604 288 474 8.79E-40 T 12-10-2018 Vc3S01_0077 fdc6fe1d4c183db92eadec62c5825b0d 476 Hamap MF_01550 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [gppA]. 1 474 49.211 T 12-10-2018 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase GO:0008894|GO:0015974 KEGG: 00230+3.6.1.40 Vc3S01_p40103 bb5c146420e617ab47bbdc8aaa52a4a2 396 Gene3D G3DSA:1.10.1200.160 332 362 1.3E-43 T 12-10-2018 Vc3S01_p40103 bb5c146420e617ab47bbdc8aaa52a4a2 396 Pfam PF03743 Bacterial conjugation TrbI-like protein 210 382 2.7E-42 T 12-10-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI Vc3S01_p40103 bb5c146420e617ab47bbdc8aaa52a4a2 396 Gene3D G3DSA:2.40.128.260 213 381 1.3E-43 T 12-10-2018 Vc3S01_A0393 59e4fbb006bbbeb6db387d7d0fe7bd6b 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 124 1.9E-20 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Vc3S01_A0393 59e4fbb006bbbeb6db387d7d0fe7bd6b 127 Gene3D G3DSA:3.10.180.10 7 125 1.4E-32 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Vc3S01_A0393 59e4fbb006bbbeb6db387d7d0fe7bd6b 127 SUPERFAMILY SSF54593 1 126 1.34E-32 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Vc3S01_A2029 38c2c7cae6eb3055faa826d921353c78 235 Gene3D G3DSA:3.40.605.10 42 220 6.6E-9 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Vc3S01_A2029 38c2c7cae6eb3055faa826d921353c78 235 SUPERFAMILY SSF53720 9 180 2.88E-10 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Vc3S01_2754 c94d3233e070b996edcb306eeb604f5f 1516 Pfam PF01493 GXGXG motif 1267 1452 1.4E-83 T 12-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 Vc3S01_2754 c94d3233e070b996edcb306eeb604f5f 1516 Gene3D G3DSA:2.160.20.60 1239 1510 3.5E-109 T 12-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 Vc3S01_2754 c94d3233e070b996edcb306eeb604f5f 1516 SUPERFAMILY SSF51395 452 1221 5.13E-268 T 12-10-2018 Vc3S01_2754 c94d3233e070b996edcb306eeb604f5f 1516 Gene3D G3DSA:3.20.20.70 448 815 0.0 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_2754 c94d3233e070b996edcb306eeb604f5f 1516 SUPERFAMILY SSF69336 1235 1498 9.02E-96 T 12-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 Vc3S01_2754 c94d3233e070b996edcb306eeb604f5f 1516 Gene3D G3DSA:3.60.20.10 21 560 0.0 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Vc3S01_2754 c94d3233e070b996edcb306eeb604f5f 1516 Pfam PF01645 Conserved region in glutamate synthase 817 1187 8.2E-151 T 12-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 Vc3S01_2754 c94d3233e070b996edcb306eeb604f5f 1516 SUPERFAMILY SSF56235 21 447 8.49E-153 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Vc3S01_2754 c94d3233e070b996edcb306eeb604f5f 1516 Pfam PF04898 Glutamate synthase central domain 472 756 5.3E-117 T 12-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 Vc3S01_2754 c94d3233e070b996edcb306eeb604f5f 1516 Pfam PF00310 Glutamine amidotransferases class-II 21 443 4.7E-185 T 12-10-2018 IPR017932 Glutamine amidotransferase type 2 domain Vc3S01_2754 c94d3233e070b996edcb306eeb604f5f 1516 Gene3D G3DSA:3.20.20.70 498 1204 0.0 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_0607 5dd1b4bad8c038a3bf1a963f650e09ea 361 Pfam PF01594 AI-2E family transporter 14 347 3.9E-53 T 12-10-2018 IPR002549 Transmembrane protein TqsA-like Vc3S01_2081 7f3d07835e2e5514e8dfb99aba48eff9 435 SUPERFAMILY SSF55681 118 429 1.38E-97 T 12-10-2018 Vc3S01_2081 7f3d07835e2e5514e8dfb99aba48eff9 435 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 228 411 2.9E-35 T 12-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Vc3S01_2081 7f3d07835e2e5514e8dfb99aba48eff9 435 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 109 2.1E-29 T 12-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 Vc3S01_2081 7f3d07835e2e5514e8dfb99aba48eff9 435 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 433 40.122 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Vc3S01_2081 7f3d07835e2e5514e8dfb99aba48eff9 435 SUPERFAMILY SSF46589 1 114 2.41E-27 T 12-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 Vc3S01_2081 7f3d07835e2e5514e8dfb99aba48eff9 435 PIRSF PIRSF001529 1 435 2.7E-186 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Vc3S01_2081 7f3d07835e2e5514e8dfb99aba48eff9 435 PRINTS PR00981 Seryl-tRNA synthetase signature 327 340 2.1E-33 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Vc3S01_2081 7f3d07835e2e5514e8dfb99aba48eff9 435 PRINTS PR00981 Seryl-tRNA synthetase signature 344 360 2.1E-33 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Vc3S01_2081 7f3d07835e2e5514e8dfb99aba48eff9 435 PRINTS PR00981 Seryl-tRNA synthetase signature 275 287 2.1E-33 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Vc3S01_2081 7f3d07835e2e5514e8dfb99aba48eff9 435 PRINTS PR00981 Seryl-tRNA synthetase signature 287 300 2.1E-33 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Vc3S01_2081 7f3d07835e2e5514e8dfb99aba48eff9 435 PRINTS PR00981 Seryl-tRNA synthetase signature 362 378 2.1E-33 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Vc3S01_2081 7f3d07835e2e5514e8dfb99aba48eff9 435 Gene3D G3DSA:3.30.930.10 107 434 3.7E-112 T 12-10-2018 Vc3S01_2081 7f3d07835e2e5514e8dfb99aba48eff9 435 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 428 1.7E-171 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Vc3S01_2081 7f3d07835e2e5514e8dfb99aba48eff9 435 Gene3D G3DSA:1.10.287.40 1 106 1.9E-20 T 12-10-2018 Vc3S01_0495 39c0b7c195da10691af637b1743caeee 409 SUPERFAMILY SSF51735 108 295 1.69E-58 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_0495 39c0b7c195da10691af637b1743caeee 409 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 118 294 1.6E-53 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 Vc3S01_0495 39c0b7c195da10691af637b1743caeee 409 SUPERFAMILY SSF55021 334 408 5.34E-17 T 12-10-2018 Vc3S01_0495 39c0b7c195da10691af637b1743caeee 409 Gene3D G3DSA:3.40.50.720 109 297 8.8E-111 T 12-10-2018 Vc3S01_0495 39c0b7c195da10691af637b1743caeee 409 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 12-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 Vc3S01_0495 39c0b7c195da10691af637b1743caeee 409 Gene3D G3DSA:3.30.70.260 328 408 1.2E-32 T 12-10-2018 Vc3S01_0495 39c0b7c195da10691af637b1743caeee 409 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Vc3S01_0495 39c0b7c195da10691af637b1743caeee 409 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Vc3S01_0495 39c0b7c195da10691af637b1743caeee 409 SUPERFAMILY SSF52283 7 137 8.08E-50 T 12-10-2018 Vc3S01_0495 39c0b7c195da10691af637b1743caeee 409 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 13 326 1.9E-39 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 Vc3S01_0495 39c0b7c195da10691af637b1743caeee 409 Gene3D G3DSA:3.40.50.720 14 312 8.8E-111 T 12-10-2018 Vc3S01_A1352 3dd4a82ff94a61450407aebcbeb8bec6 226 Gene3D G3DSA:1.10.10.10 124 226 7.5E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A1352 3dd4a82ff94a61450407aebcbeb8bec6 226 SMART SM00448 1 108 6.2E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A1352 3dd4a82ff94a61450407aebcbeb8bec6 226 Pfam PF00072 Response regulator receiver domain 1 108 2.3E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A1352 3dd4a82ff94a61450407aebcbeb8bec6 226 Gene3D G3DSA:3.40.50.2300 1 123 3.5E-33 T 12-10-2018 Vc3S01_A1352 3dd4a82ff94a61450407aebcbeb8bec6 226 SUPERFAMILY SSF46894 130 225 8.22E-19 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Vc3S01_A1352 3dd4a82ff94a61450407aebcbeb8bec6 226 SUPERFAMILY SSF52172 1 136 2.56E-36 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_A1352 3dd4a82ff94a61450407aebcbeb8bec6 226 SMART SM00862 149 225 2.3E-13 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Vc3S01_A1352 3dd4a82ff94a61450407aebcbeb8bec6 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 225 1.6E-19 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Vc3S01_A0253 8742be8ad9b6407bbc28954ebd8238a7 466 Gene3D G3DSA:3.90.1150.10 6 460 2.3E-209 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Vc3S01_A0253 8742be8ad9b6407bbc28954ebd8238a7 466 ProSitePatterns PS00853 Beta-eliminating lyases pyridoxal-phosphate attachment site. 255 273 - T 12-10-2018 IPR018176 Tryptophanase, conserved site KEGG: 00380+4.1.99.1 Vc3S01_A0253 8742be8ad9b6407bbc28954ebd8238a7 466 PIRSF PIRSF001386 1 466 3.6E-228 T 12-10-2018 IPR011166 Beta-eliminating lyase family GO:0009072|GO:0016830 KEGG: 00380+4.1.99.1 Vc3S01_A0253 8742be8ad9b6407bbc28954ebd8238a7 466 Pfam PF01212 Beta-eliminating lyase 46 431 5.1E-99 T 12-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 Vc3S01_A0253 8742be8ad9b6407bbc28954ebd8238a7 466 SUPERFAMILY SSF53383 2 464 4.59E-145 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Vc3S01_A0253 8742be8ad9b6407bbc28954ebd8238a7 466 Hamap MF_00544 Tryptophanase [tnaA]. 1 465 106.617 T 12-10-2018 IPR013440 Tryptophanase GO:0006568|GO:0009034 KEGG: 00380+4.1.99.1 Vc3S01_A0253 8742be8ad9b6407bbc28954ebd8238a7 466 Gene3D G3DSA:3.40.640.10 58 326 2.3E-209 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Vc3S01_A0949 9b2aa926826dca995e37c390ebd33081 193 SUPERFAMILY SSF52172 2 186 2.24E-25 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_A0949 9b2aa926826dca995e37c390ebd33081 193 SMART SM01012 131 186 4.7E-19 T 12-10-2018 IPR005561 ANTAR domain GO:0003723 Vc3S01_A0949 9b2aa926826dca995e37c390ebd33081 193 Gene3D G3DSA:1.10.10.10 133 192 1.5E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A0949 9b2aa926826dca995e37c390ebd33081 193 PIRSF PIRSF036382 1 193 5.8E-25 T 12-10-2018 IPR008327 Signal transduction response regulator, antiterminator Vc3S01_A0949 9b2aa926826dca995e37c390ebd33081 193 Pfam PF03861 ANTAR domain 134 186 1.7E-17 T 12-10-2018 IPR005561 ANTAR domain GO:0003723 Vc3S01_1239 71b07c0d37eed2ed9965e632cb15a858 420 Gene3D G3DSA:1.20.1420.20 16 402 8.7E-86 T 12-10-2018 IPR038352 Imelysin-like domain superfamily Vc3S01_1239 71b07c0d37eed2ed9965e632cb15a858 420 Pfam PF09375 Imelysin 40 397 2.0E-97 T 12-10-2018 IPR018976 Imelysin-like domain Vc3S01_0302 8f2220cde575eb23903ab69f5db02869 300 SUPERFAMILY SSF51730 22 294 5.69E-95 T 12-10-2018 IPR029041 FAD-linked oxidoreductase-like Vc3S01_0302 8f2220cde575eb23903ab69f5db02869 300 Pfam PF02219 Methylenetetrahydrofolate reductase 17 291 4.4E-100 T 12-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 Vc3S01_0302 8f2220cde575eb23903ab69f5db02869 300 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 25 290 2.0E-102 T 12-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 Vc3S01_0302 8f2220cde575eb23903ab69f5db02869 300 Gene3D G3DSA:3.20.20.220 1 299 7.6E-112 T 12-10-2018 Vc3S01_0726 7dcc500b7041c197906fd8bc334f3309 338 Gene3D G3DSA:3.10.350.10 15 68 2.9E-7 T 12-10-2018 IPR036779 LysM domain superfamily Vc3S01_0726 7dcc500b7041c197906fd8bc334f3309 338 Pfam PF01476 LysM domain 16 69 3.0E-7 T 12-10-2018 IPR018392 LysM domain Vc3S01_0726 7dcc500b7041c197906fd8bc334f3309 338 SMART SM00257 15 70 0.0044 T 12-10-2018 IPR018392 LysM domain Vc3S01_2321 31ce55cfd174ded65ce9e966ad911de6 90 SUPERFAMILY SSF47729 1 90 3.68E-32 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Vc3S01_2321 31ce55cfd174ded65ce9e966ad911de6 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 12-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 Vc3S01_2321 31ce55cfd174ded65ce9e966ad911de6 90 SMART SM00411 1 90 9.8E-44 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Vc3S01_2321 31ce55cfd174ded65ce9e966ad911de6 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 7.9E-21 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Vc3S01_2321 31ce55cfd174ded65ce9e966ad911de6 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 7.9E-21 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Vc3S01_2321 31ce55cfd174ded65ce9e966ad911de6 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 7.9E-21 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Vc3S01_2321 31ce55cfd174ded65ce9e966ad911de6 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 3.1E-34 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Vc3S01_2321 31ce55cfd174ded65ce9e966ad911de6 90 Gene3D G3DSA:4.10.520.10 1 90 2.0E-36 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Vc3S01_0780 773dc89bc1163e6a40ea7a12137a66f3 242 Gene3D G3DSA:1.10.287.610 103 150 6.8E-92 T 12-10-2018 Vc3S01_0780 773dc89bc1163e6a40ea7a12137a66f3 242 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 12-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 Vc3S01_0780 773dc89bc1163e6a40ea7a12137a66f3 242 Pfam PF00318 Ribosomal protein S2 9 224 2.4E-93 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_0780 773dc89bc1163e6a40ea7a12137a66f3 242 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 40.943 T 12-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_0780 773dc89bc1163e6a40ea7a12137a66f3 242 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 12-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 Vc3S01_0780 773dc89bc1163e6a40ea7a12137a66f3 242 PRINTS PR00395 Ribosomal protein S2 signature 158 175 4.1E-37 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_0780 773dc89bc1163e6a40ea7a12137a66f3 242 PRINTS PR00395 Ribosomal protein S2 signature 196 210 4.1E-37 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_0780 773dc89bc1163e6a40ea7a12137a66f3 242 PRINTS PR00395 Ribosomal protein S2 signature 37 46 4.1E-37 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_0780 773dc89bc1163e6a40ea7a12137a66f3 242 PRINTS PR00395 Ribosomal protein S2 signature 175 186 4.1E-37 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_0780 773dc89bc1163e6a40ea7a12137a66f3 242 PRINTS PR00395 Ribosomal protein S2 signature 6 24 4.1E-37 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_0780 773dc89bc1163e6a40ea7a12137a66f3 242 PRINTS PR00395 Ribosomal protein S2 signature 87 104 4.1E-37 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_0780 773dc89bc1163e6a40ea7a12137a66f3 242 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 7.8E-107 T 12-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_0780 773dc89bc1163e6a40ea7a12137a66f3 242 Gene3D G3DSA:3.40.50.10490 8 219 6.8E-92 T 12-10-2018 Vc3S01_0780 773dc89bc1163e6a40ea7a12137a66f3 242 SUPERFAMILY SSF52313 6 232 2.09E-95 T 12-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily Vc3S01_1923 7680c9a1e3621e55dc32b339dd225ab8 274 Pfam PF10977 Protein of unknown function (DUF2797) 38 270 3.0E-96 T 12-10-2018 IPR021246 Protein of unknown function DUF2797 Vc3S01_0656 61697a55bf8c3456bcd469cec8af5226 326 Pfam PF00702 haloacid dehalogenase-like hydrolase 107 279 1.5E-15 T 12-10-2018 Vc3S01_0656 61697a55bf8c3456bcd469cec8af5226 326 Gene3D G3DSA:3.40.50.1000 2 310 2.4E-169 T 12-10-2018 IPR023214 HAD superfamily Vc3S01_0656 61697a55bf8c3456bcd469cec8af5226 326 Gene3D G3DSA:1.10.150.210 115 177 2.4E-169 T 12-10-2018 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|Reactome: R-HSA-977347 Vc3S01_0656 61697a55bf8c3456bcd469cec8af5226 326 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 103 310 4.1E-83 T 12-10-2018 Vc3S01_0656 61697a55bf8c3456bcd469cec8af5226 326 Gene3D G3DSA:3.30.70.2020 8 322 2.4E-169 T 12-10-2018 Vc3S01_0656 61697a55bf8c3456bcd469cec8af5226 326 SUPERFAMILY SSF56784 105 311 2.21E-49 T 12-10-2018 IPR036412 HAD-like superfamily Vc3S01_0656 61697a55bf8c3456bcd469cec8af5226 326 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 107 277 6.5E-27 T 12-10-2018 Vc3S01_p20170 6e903c6d6480a77fc96063a9d66a497b 168 PRINTS PR00070 Dihydrofolate reductase signature 41 52 1.6E-13 T 12-10-2018 Vc3S01_p20170 6e903c6d6480a77fc96063a9d66a497b 168 PRINTS PR00070 Dihydrofolate reductase signature 28 36 1.6E-13 T 12-10-2018 Vc3S01_p20170 6e903c6d6480a77fc96063a9d66a497b 168 PRINTS PR00070 Dihydrofolate reductase signature 14 24 1.6E-13 T 12-10-2018 Vc3S01_p20170 6e903c6d6480a77fc96063a9d66a497b 168 PRINTS PR00070 Dihydrofolate reductase signature 97 111 1.6E-13 T 12-10-2018 Vc3S01_p20170 6e903c6d6480a77fc96063a9d66a497b 168 Pfam PF00186 Dihydrofolate reductase 2 167 2.2E-50 T 12-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 Vc3S01_p20170 6e903c6d6480a77fc96063a9d66a497b 168 PIRSF PIRSF000194 1 168 9.9E-49 T 12-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 Vc3S01_p20170 6e903c6d6480a77fc96063a9d66a497b 168 Gene3D G3DSA:3.40.430.10 1 168 5.5E-55 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Vc3S01_p20170 6e903c6d6480a77fc96063a9d66a497b 168 SUPERFAMILY SSF53597 1 168 2.88E-54 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Vc3S01_0169 a328c4300e569be449fccdc4f4bf44cd 355 Gene3D G3DSA:3.20.20.210 1 355 1.9E-159 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Vc3S01_0169 a328c4300e569be449fccdc4f4bf44cd 355 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 12-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Vc3S01_0169 a328c4300e569be449fccdc4f4bf44cd 355 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 12-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Vc3S01_0169 a328c4300e569be449fccdc4f4bf44cd 355 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 348 4.9E-142 T 12-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Vc3S01_0169 a328c4300e569be449fccdc4f4bf44cd 355 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 348 4.9E-140 T 12-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Vc3S01_0169 a328c4300e569be449fccdc4f4bf44cd 355 SUPERFAMILY SSF51726 1 354 3.66E-123 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Vc3S01_0169 a328c4300e569be449fccdc4f4bf44cd 355 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 350 50.803 T 12-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Vc3S01_3023 d34a1e4d02db03c6bb21b959e3ae04ee 608 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 90 484 3.9E-58 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain Vc3S01_3023 d34a1e4d02db03c6bb21b959e3ae04ee 608 SUPERFAMILY SSF53850 41 561 3.98E-96 T 12-10-2018 Vc3S01_3023 d34a1e4d02db03c6bb21b959e3ae04ee 608 Gene3D G3DSA:3.10.105.10 322 538 1.0E-42 T 12-10-2018 Vc3S01_3023 d34a1e4d02db03c6bb21b959e3ae04ee 608 Gene3D G3DSA:3.40.190.10 19 321 1.4E-45 T 12-10-2018 Vc3S01_3023 d34a1e4d02db03c6bb21b959e3ae04ee 608 PIRSF PIRSF002741 1 563 2.8E-71 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Vc3S01_0224 f92389cfd5179c6de1668369f82b43c0 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 49.27 T 12-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 Vc3S01_0224 f92389cfd5179c6de1668369f82b43c0 188 SUPERFAMILY SSF50249 70 128 1.29E-17 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Vc3S01_0224 f92389cfd5179c6de1668369f82b43c0 188 SUPERFAMILY SSF50104 2 64 2.26E-20 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily Vc3S01_0224 f92389cfd5179c6de1668369f82b43c0 188 SMART SM01185 69 123 2.8E-26 T 12-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 Vc3S01_0224 f92389cfd5179c6de1668369f82b43c0 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 4.5E-25 T 12-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 Vc3S01_0224 f92389cfd5179c6de1668369f82b43c0 188 SUPERFAMILY SSF50249 130 187 8.74E-18 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Vc3S01_0224 f92389cfd5179c6de1668369f82b43c0 188 Gene3D G3DSA:2.30.30.30 1 64 9.0E-26 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 Vc3S01_0224 f92389cfd5179c6de1668369f82b43c0 188 Gene3D G3DSA:2.40.50.140 66 129 1.9E-29 T 12-10-2018 Vc3S01_0224 f92389cfd5179c6de1668369f82b43c0 188 TIGRFAM TIGR00038 efp: translation elongation factor P 5 187 3.1E-77 T 12-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 Vc3S01_0224 f92389cfd5179c6de1668369f82b43c0 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 12-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site Vc3S01_0224 f92389cfd5179c6de1668369f82b43c0 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 5.9E-23 T 12-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 Vc3S01_0224 f92389cfd5179c6de1668369f82b43c0 188 PIRSF PIRSF005901 2 188 4.3E-63 T 12-10-2018 IPR020599 Translation elongation factor P/YeiP Vc3S01_0224 f92389cfd5179c6de1668369f82b43c0 188 SMART SM00841 131 186 1.5E-30 T 12-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 Vc3S01_0224 f92389cfd5179c6de1668369f82b43c0 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 61 3.4E-24 T 12-10-2018 IPR013185 Translation elongation factor, KOW-like Vc3S01_0224 f92389cfd5179c6de1668369f82b43c0 188 Gene3D G3DSA:2.40.50.140 130 188 7.4E-27 T 12-10-2018 Vc3S01_0972 c847defb320fe702659cbb98e3da7686 371 Gene3D G3DSA:3.40.50.720 3 356 9.4E-146 T 12-10-2018 Vc3S01_0972 c847defb320fe702659cbb98e3da7686 371 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 261 275 - T 12-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Vc3S01_0972 c847defb320fe702659cbb98e3da7686 371 SUPERFAMILY SSF55347 133 354 5.92E-78 T 12-10-2018 Vc3S01_0972 c847defb320fe702659cbb98e3da7686 371 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 1 366 5.1E-189 T 12-10-2018 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Vc3S01_0972 c847defb320fe702659cbb98e3da7686 371 SMART SM00859 2 121 2.0E-24 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Vc3S01_0972 c847defb320fe702659cbb98e3da7686 371 SUPERFAMILY SSF51735 1 146 4.7E-49 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_0972 c847defb320fe702659cbb98e3da7686 371 Gene3D G3DSA:3.30.360.10 134 350 9.4E-146 T 12-10-2018 Vc3S01_0972 c847defb320fe702659cbb98e3da7686 371 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 367 31.579 T 12-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Vc3S01_0972 c847defb320fe702659cbb98e3da7686 371 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 2 120 2.7E-22 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Vc3S01_0972 c847defb320fe702659cbb98e3da7686 371 PIRSF PIRSF000148 1 371 1.7E-64 T 12-10-2018 Vc3S01_0972 c847defb320fe702659cbb98e3da7686 371 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 143 353 3.3E-57 T 12-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Vc3S01_2689 03fecbda4ab3d9bc17eded3a18db9390 100 SUPERFAMILY SSF48295 2 95 9.42E-30 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 Vc3S01_2689 03fecbda4ab3d9bc17eded3a18db9390 100 TIGRFAM TIGR01321 TrpR: trp operon repressor 6 89 1.1E-25 T 12-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 Vc3S01_2689 03fecbda4ab3d9bc17eded3a18db9390 100 Gene3D G3DSA:1.10.1270.10 1 98 1.3E-33 T 12-10-2018 IPR038116 TrpR-like superfamily Vc3S01_2689 03fecbda4ab3d9bc17eded3a18db9390 100 PIRSF PIRSF003196 1 100 4.7E-40 T 12-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 Vc3S01_2689 03fecbda4ab3d9bc17eded3a18db9390 100 Pfam PF01371 Trp repressor protein 8 94 2.3E-33 T 12-10-2018 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 Vc3S01_2689 03fecbda4ab3d9bc17eded3a18db9390 100 Hamap MF_00475 Trp operon repressor [trpR]. 6 99 23.599 T 12-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 Vc3S01_2689 03fecbda4ab3d9bc17eded3a18db9390 100 ProDom PD012582 REPRESSOR TRANSCRIPTION TRP OPERON DNA-BINDING REGULATION HOMOLOG AROH FOR TRYPTOPHAN 4 79 6.0E-37 T 12-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 Vc3S01_A0449 78e433f8eb1c812f8d472d14e714d0d8 82 PIRSF PIRSF002855 1 82 9.6E-32 T 12-10-2018 IPR016367 Murein-lipoprotein Vc3S01_A0449 78e433f8eb1c812f8d472d14e714d0d8 82 Pfam PF04728 Lipoprotein leucine-zipper 30 82 1.3E-24 T 12-10-2018 IPR006817 Lipoprotein leucine-zipper GO:0019867 Vc3S01_A0449 78e433f8eb1c812f8d472d14e714d0d8 82 Gene3D G3DSA:1.20.5.190 23 81 8.3E-13 T 12-10-2018 Vc3S01_A0449 78e433f8eb1c812f8d472d14e714d0d8 82 SUPERFAMILY SSF58042 29 81 2.88E-16 T 12-10-2018 Vc3S01_1083 b1b648748c8eab8ed2a36d1ee39411dd 149 SUPERFAMILY SSF52788 1 149 9.68E-47 T 12-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily Vc3S01_1083 b1b648748c8eab8ed2a36d1ee39411dd 149 SMART SM00226 2 148 3.3E-40 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I Vc3S01_1083 b1b648748c8eab8ed2a36d1ee39411dd 149 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 5 143 4.8E-36 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I Vc3S01_1083 b1b648748c8eab8ed2a36d1ee39411dd 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 79 94 5.3E-23 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 Vc3S01_1083 b1b648748c8eab8ed2a36d1ee39411dd 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 120 135 5.3E-23 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 Vc3S01_1083 b1b648748c8eab8ed2a36d1ee39411dd 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 4 21 5.3E-23 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 Vc3S01_1083 b1b648748c8eab8ed2a36d1ee39411dd 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 45 61 5.3E-23 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 Vc3S01_1083 b1b648748c8eab8ed2a36d1ee39411dd 149 Gene3D G3DSA:3.40.50.2300 1 149 2.2E-56 T 12-10-2018 Vc3S01_p20159 f04b9872d702c03c6d4314059b99bf75 399 SUPERFAMILY SSF103473 3 387 5.89E-62 T 12-10-2018 IPR036259 MFS transporter superfamily Vc3S01_p20159 f04b9872d702c03c6d4314059b99bf75 399 ProSitePatterns PS00216 Sugar transport proteins signature 1. 63 79 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Vc3S01_p20159 f04b9872d702c03c6d4314059b99bf75 399 Pfam PF07690 Major Facilitator Superfamily 11 225 1.8E-30 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Vc3S01_p20159 f04b9872d702c03c6d4314059b99bf75 399 Gene3D G3DSA:1.20.1250.20 2 385 6.3E-68 T 12-10-2018 Vc3S01_p20159 f04b9872d702c03c6d4314059b99bf75 399 PRINTS PR01035 Tetracycline resistance protein signature 45 64 1.9E-156 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Vc3S01_p20159 f04b9872d702c03c6d4314059b99bf75 399 PRINTS PR01035 Tetracycline resistance protein signature 161 181 1.9E-156 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Vc3S01_p20159 f04b9872d702c03c6d4314059b99bf75 399 PRINTS PR01035 Tetracycline resistance protein signature 248 268 1.9E-156 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Vc3S01_p20159 f04b9872d702c03c6d4314059b99bf75 399 PRINTS PR01035 Tetracycline resistance protein signature 301 321 1.9E-156 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Vc3S01_p20159 f04b9872d702c03c6d4314059b99bf75 399 PRINTS PR01035 Tetracycline resistance protein signature 133 155 1.9E-156 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Vc3S01_p20159 f04b9872d702c03c6d4314059b99bf75 399 PRINTS PR01035 Tetracycline resistance protein signature 366 385 1.9E-156 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Vc3S01_p20159 f04b9872d702c03c6d4314059b99bf75 399 PRINTS PR01035 Tetracycline resistance protein signature 16 32 1.9E-156 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Vc3S01_p20159 f04b9872d702c03c6d4314059b99bf75 399 PRINTS PR01035 Tetracycline resistance protein signature 76 100 1.9E-156 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Vc3S01_p20159 f04b9872d702c03c6d4314059b99bf75 399 PRINTS PR01035 Tetracycline resistance protein signature 219 236 1.9E-156 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Vc3S01_p20159 f04b9872d702c03c6d4314059b99bf75 399 PRINTS PR01035 Tetracycline resistance protein signature 336 359 1.9E-156 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Vc3S01_p20159 f04b9872d702c03c6d4314059b99bf75 399 PRINTS PR01035 Tetracycline resistance protein signature 103 124 1.9E-156 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Vc3S01_p20159 f04b9872d702c03c6d4314059b99bf75 399 PRINTS PR01035 Tetracycline resistance protein signature 276 297 1.9E-156 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Vc3S01_A0368 796102bb28ba41a9944541565bcc8037 444 SUPERFAMILY SSF52540 130 365 1.03E-72 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A0368 796102bb28ba41a9944541565bcc8037 444 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 150 163 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Vc3S01_A0368 796102bb28ba41a9944541565bcc8037 444 SMART SM00382 146 289 1.2E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_A0368 796102bb28ba41a9944541565bcc8037 444 Gene3D G3DSA:3.40.50.2300 1 118 1.9E-10 T 12-10-2018 Vc3S01_A0368 796102bb28ba41a9944541565bcc8037 444 Gene3D G3DSA:1.10.8.60 297 372 2.1E-22 T 12-10-2018 Vc3S01_A0368 796102bb28ba41a9944541565bcc8037 444 Gene3D G3DSA:1.10.10.60 379 437 2.0E-10 T 12-10-2018 Vc3S01_A0368 796102bb28ba41a9944541565bcc8037 444 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 212 227 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Vc3S01_A0368 796102bb28ba41a9944541565bcc8037 444 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 336 345 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Vc3S01_A0368 796102bb28ba41a9944541565bcc8037 444 SUPERFAMILY SSF46689 336 427 5.38E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_A0368 796102bb28ba41a9944541565bcc8037 444 SUPERFAMILY SSF52172 2 170 2.42E-18 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_A0368 796102bb28ba41a9944541565bcc8037 444 Gene3D G3DSA:3.40.50.300 119 296 1.3E-66 T 12-10-2018 Vc3S01_A0368 796102bb28ba41a9944541565bcc8037 444 Pfam PF02954 Bacterial regulatory protein, Fis family 391 427 3.5E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Vc3S01_A0368 796102bb28ba41a9944541565bcc8037 444 Pfam PF00158 Sigma-54 interaction domain 127 292 7.8E-71 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Vc3S01_0301 d20afc974571593cd201fdacd717f5ff 802 Gene3D G3DSA:3.30.70.260 381 443 1.7E-5 T 12-10-2018 Vc3S01_0301 d20afc974571593cd201fdacd717f5ff 802 Gene3D G3DSA:3.30.70.260 366 380 1.7E-5 T 12-10-2018 Vc3S01_0301 d20afc974571593cd201fdacd717f5ff 802 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 8 445 4.1E-66 T 12-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Vc3S01_0301 d20afc974571593cd201fdacd717f5ff 802 Gene3D G3DSA:3.40.1160.10 8 290 1.7E-73 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Vc3S01_0301 d20afc974571593cd201fdacd717f5ff 802 SUPERFAMILY SSF53633 5 291 2.62E-56 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Vc3S01_0301 d20afc974571593cd201fdacd717f5ff 802 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 457 592 6.3E-15 T 12-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 Vc3S01_0301 d20afc974571593cd201fdacd717f5ff 802 ProSitePatterns PS00324 Aspartokinase signature. 7 15 - T 12-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Vc3S01_0301 d20afc974571593cd201fdacd717f5ff 802 Gene3D G3DSA:3.30.360.10 611 781 4.0E-103 T 12-10-2018 Vc3S01_0301 d20afc974571593cd201fdacd717f5ff 802 PIRSF PIRSF000727 5 802 3.0E-290 T 12-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Vc3S01_0301 d20afc974571593cd201fdacd717f5ff 802 SUPERFAMILY SSF55347 600 783 2.16E-44 T 12-10-2018 Vc3S01_0301 d20afc974571593cd201fdacd717f5ff 802 Gene3D G3DSA:3.40.50.720 451 798 4.0E-103 T 12-10-2018 Vc3S01_0301 d20afc974571593cd201fdacd717f5ff 802 Pfam PF00742 Homoserine dehydrogenase 600 795 8.6E-43 T 12-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 Vc3S01_0301 d20afc974571593cd201fdacd717f5ff 802 Pfam PF00696 Amino acid kinase family 5 273 5.2E-43 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Vc3S01_0301 d20afc974571593cd201fdacd717f5ff 802 SUPERFAMILY SSF51735 448 622 2.13E-35 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_0301 d20afc974571593cd201fdacd717f5ff 802 Gene3D G3DSA:1.20.120.1320 44 137 1.7E-73 T 12-10-2018 Vc3S01_0301 d20afc974571593cd201fdacd717f5ff 802 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 646 668 - T 12-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 Vc3S01_A1274 64dd53300f6d298675a58ee4eee48f9e 1216 SMART SM00062 33 244 1.9E-9 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Vc3S01_A1274 64dd53300f6d298675a58ee4eee48f9e 1216 SMART SM00062 269 485 0.01 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Vc3S01_A1274 64dd53300f6d298675a58ee4eee48f9e 1216 Gene3D G3DSA:3.40.190.10 120 210 2.0E-24 T 12-10-2018 Vc3S01_A1274 64dd53300f6d298675a58ee4eee48f9e 1216 Gene3D G3DSA:3.40.190.10 354 444 2.2E-21 T 12-10-2018 Vc3S01_A1274 64dd53300f6d298675a58ee4eee48f9e 1216 Gene3D G3DSA:3.40.50.2300 988 1117 4.8E-30 T 12-10-2018 Vc3S01_A1274 64dd53300f6d298675a58ee4eee48f9e 1216 Gene3D G3DSA:1.10.287.130 637 730 6.1E-20 T 12-10-2018 Vc3S01_A1274 64dd53300f6d298675a58ee4eee48f9e 1216 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 780 887 4.0E-26 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_A1274 64dd53300f6d298675a58ee4eee48f9e 1216 Gene3D G3DSA:3.40.190.10 267 479 2.2E-21 T 12-10-2018 Vc3S01_A1274 64dd53300f6d298675a58ee4eee48f9e 1216 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 275 481 3.0E-11 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Vc3S01_A1274 64dd53300f6d298675a58ee4eee48f9e 1216 Gene3D G3DSA:3.40.190.10 51 232 2.0E-24 T 12-10-2018 Vc3S01_A1274 64dd53300f6d298675a58ee4eee48f9e 1216 Pfam PF00072 Response regulator receiver domain 993 1105 4.0E-20 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A1274 64dd53300f6d298675a58ee4eee48f9e 1216 SUPERFAMILY SSF53850 268 481 1.88E-15 T 12-10-2018 Vc3S01_A1274 64dd53300f6d298675a58ee4eee48f9e 1216 PRINTS PR00344 Bacterial sensor protein C-terminal signature 850 868 1.2E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_A1274 64dd53300f6d298675a58ee4eee48f9e 1216 PRINTS PR00344 Bacterial sensor protein C-terminal signature 815 829 1.2E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_A1274 64dd53300f6d298675a58ee4eee48f9e 1216 PRINTS PR00344 Bacterial sensor protein C-terminal signature 833 843 1.2E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_A1274 64dd53300f6d298675a58ee4eee48f9e 1216 PRINTS PR00344 Bacterial sensor protein C-terminal signature 874 887 1.2E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_A1274 64dd53300f6d298675a58ee4eee48f9e 1216 SMART SM00388 667 732 6.7E-18 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_A1274 64dd53300f6d298675a58ee4eee48f9e 1216 SUPERFAMILY SSF52172 991 1110 1.85E-30 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_A1274 64dd53300f6d298675a58ee4eee48f9e 1216 Gene3D G3DSA:1.20.120.160 1118 1215 6.5E-7 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 Vc3S01_A1274 64dd53300f6d298675a58ee4eee48f9e 1216 SMART SM00448 991 1105 1.5E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A1274 64dd53300f6d298675a58ee4eee48f9e 1216 Pfam PF00512 His Kinase A (phospho-acceptor) domain 668 732 2.5E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_A1274 64dd53300f6d298675a58ee4eee48f9e 1216 SUPERFAMILY SSF47384 653 733 1.96E-18 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Vc3S01_A1274 64dd53300f6d298675a58ee4eee48f9e 1216 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 52 234 4.2E-24 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Vc3S01_A1274 64dd53300f6d298675a58ee4eee48f9e 1216 SUPERFAMILY SSF55874 721 893 1.01E-44 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_A1274 64dd53300f6d298675a58ee4eee48f9e 1216 Gene3D G3DSA:3.30.565.10 731 891 1.2E-42 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_A1274 64dd53300f6d298675a58ee4eee48f9e 1216 SUPERFAMILY SSF47226 1117 1214 6.41E-12 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 Vc3S01_A1274 64dd53300f6d298675a58ee4eee48f9e 1216 SMART SM00387 779 890 2.0E-30 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_A1274 64dd53300f6d298675a58ee4eee48f9e 1216 SUPERFAMILY SSF53850 53 233 1.48E-25 T 12-10-2018 Vc3S01_A0442 776b98be429d751ae76c320b8600078d 494 Gene3D G3DSA:1.25.40.10 2 170 5.2E-9 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_A0442 776b98be429d751ae76c320b8600078d 494 Gene3D G3DSA:1.25.40.10 171 317 1.0E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_A0442 776b98be429d751ae76c320b8600078d 494 SUPERFAMILY SSF48452 121 315 2.85E-14 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_A0442 776b98be429d751ae76c320b8600078d 494 SMART SM00028 287 320 440.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_A0442 776b98be429d751ae76c320b8600078d 494 SMART SM00028 207 240 12.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_A0442 776b98be429d751ae76c320b8600078d 494 SMART SM00028 127 160 29.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_A0442 776b98be429d751ae76c320b8600078d 494 SMART SM00028 87 120 370.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_0295 f9c87ef8d705b9dfacc5a214c43506b0 394 Gene3D G3DSA:3.40.50.300 1 203 3.3E-69 T 12-10-2018 Vc3S01_0295 f9c87ef8d705b9dfacc5a214c43506b0 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 2.4E-33 T 12-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal Vc3S01_0295 f9c87ef8d705b9dfacc5a214c43506b0 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 393 3.6E-230 T 12-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Vc3S01_0295 f9c87ef8d705b9dfacc5a214c43506b0 394 SUPERFAMILY SSF50447 205 301 1.47E-29 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Vc3S01_0295 f9c87ef8d705b9dfacc5a214c43506b0 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site Vc3S01_0295 f9c87ef8d705b9dfacc5a214c43506b0 394 SUPERFAMILY SSF50465 302 394 1.99E-35 T 12-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Vc3S01_0295 f9c87ef8d705b9dfacc5a214c43506b0 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 59.296 T 12-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Vc3S01_0295 f9c87ef8d705b9dfacc5a214c43506b0 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 6.2E-14 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Vc3S01_0295 f9c87ef8d705b9dfacc5a214c43506b0 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 6.8E-58 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Vc3S01_0295 f9c87ef8d705b9dfacc5a214c43506b0 394 Gene3D G3DSA:2.40.30.10 338 393 4.9E-29 T 12-10-2018 Vc3S01_0295 f9c87ef8d705b9dfacc5a214c43506b0 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 3.4E-16 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Vc3S01_0295 f9c87ef8d705b9dfacc5a214c43506b0 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.7E-23 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Vc3S01_0295 f9c87ef8d705b9dfacc5a214c43506b0 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.7E-23 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Vc3S01_0295 f9c87ef8d705b9dfacc5a214c43506b0 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.7E-23 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Vc3S01_0295 f9c87ef8d705b9dfacc5a214c43506b0 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.7E-23 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Vc3S01_0295 f9c87ef8d705b9dfacc5a214c43506b0 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.7E-23 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Vc3S01_0295 f9c87ef8d705b9dfacc5a214c43506b0 394 SUPERFAMILY SSF52540 6 219 4.98E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0295 f9c87ef8d705b9dfacc5a214c43506b0 394 Gene3D G3DSA:2.40.30.10 206 334 9.7E-52 T 12-10-2018 Vc3S01_1760 cbc40ff6c948997a79d9234e101d57c8 841 SUPERFAMILY SSF88688 280 369 2.88E-12 T 12-10-2018 IPR028995 Glycoside hydrolase families 57/38, central domain superfamily Vc3S01_1760 cbc40ff6c948997a79d9234e101d57c8 841 Gene3D G3DSA:2.70.98.30 483 761 1.3E-61 T 12-10-2018 Vc3S01_1760 cbc40ff6c948997a79d9234e101d57c8 841 Pfam PF01074 Glycosyl hydrolases family 38 N-terminal domain 8 254 1.3E-35 T 12-10-2018 IPR000602 Glycoside hydrolase family 38, N-terminal domain GO:0004559|GO:0006013 Vc3S01_1760 cbc40ff6c948997a79d9234e101d57c8 841 Pfam PF09261 Alpha mannosidase middle domain 279 349 3.2E-9 T 12-10-2018 IPR015341 Glycoside hydrolase family 38, central domain GO:0004559|GO:0006013 Vc3S01_1760 cbc40ff6c948997a79d9234e101d57c8 841 SUPERFAMILY SSF74650 385 820 1.1E-28 T 12-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Vc3S01_1760 cbc40ff6c948997a79d9234e101d57c8 841 SUPERFAMILY SSF88713 8 266 3.71E-43 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Vc3S01_1760 cbc40ff6c948997a79d9234e101d57c8 841 Gene3D G3DSA:3.20.110.10 1 271 1.6E-89 T 12-10-2018 IPR027291 Glycoside hydrolase 38, N-terminal domain superfamily Vc3S01_1760 cbc40ff6c948997a79d9234e101d57c8 841 Gene3D G3DSA:1.20.1270.50 276 372 1.1E-29 T 12-10-2018 IPR037094 Glycoside hydrolase family 38, central domain superfamily GO:0004559|GO:0006013 Vc3S01_1760 cbc40ff6c948997a79d9234e101d57c8 841 SMART SM00872 278 349 4.3E-13 T 12-10-2018 IPR015341 Glycoside hydrolase family 38, central domain GO:0004559|GO:0006013 Vc3S01_A1806 b48a38e78c713400c8b076780a816eeb 170 Pfam PF10973 Protein of unknown function (DUF2799) 29 111 7.9E-25 T 12-10-2018 IPR021242 Protein of unknown function DUF2799 Vc3S01_2218 5fbd67d00c348ab539f02336cf899f33 215 Gene3D G3DSA:1.20.120.1820 3 126 1.7E-39 T 12-10-2018 Vc3S01_2218 5fbd67d00c348ab539f02336cf899f33 215 Gene3D G3DSA:1.20.1280.20 129 214 3.2E-25 T 12-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Vc3S01_2218 5fbd67d00c348ab539f02336cf899f33 215 Pfam PF02613 Nitrate reductase delta subunit 50 182 7.5E-40 T 12-10-2018 IPR020945 DMSO/Nitrate reductase chaperone Vc3S01_2218 5fbd67d00c348ab539f02336cf899f33 215 Hamap MF_01150 Chaperone protein TorD [torD]. 3 212 34.985 T 12-10-2018 IPR023069 Chaperone TorD Vc3S01_2218 5fbd67d00c348ab539f02336cf899f33 215 SUPERFAMILY SSF89155 8 212 3.27E-53 T 12-10-2018 IPR036411 TorD-like superfamily Vc3S01_A0055 f110ed39653673ee89bade11644ebb5c 300 SUPERFAMILY SSF46689 237 286 1.22E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_A0055 f110ed39653673ee89bade11644ebb5c 300 Gene3D G3DSA:1.10.10.60 183 294 3.6E-26 T 12-10-2018 Vc3S01_A0055 f110ed39653673ee89bade11644ebb5c 300 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 268 284 4.1E-7 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Vc3S01_A0055 f110ed39653673ee89bade11644ebb5c 300 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 253 268 4.1E-7 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Vc3S01_A0055 f110ed39653673ee89bade11644ebb5c 300 SMART SM00342 202 284 1.1E-26 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_A0055 f110ed39653673ee89bade11644ebb5c 300 Pfam PF12833 Helix-turn-helix domain 209 285 1.0E-15 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_A0055 f110ed39653673ee89bade11644ebb5c 300 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 238 280 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Vc3S01_A1088 c63405d86bcd5c5df982482fc0a9344a 399 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 395 52.065 T 12-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Vc3S01_A1088 c63405d86bcd5c5df982482fc0a9344a 399 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 3 80 3.8E-34 T 12-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Vc3S01_A1088 c63405d86bcd5c5df982482fc0a9344a 399 Gene3D G3DSA:3.40.50.720 1 397 5.0E-165 T 12-10-2018 Vc3S01_A1088 c63405d86bcd5c5df982482fc0a9344a 399 SUPERFAMILY SSF51735 42 152 4.95E-5 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_A1088 c63405d86bcd5c5df982482fc0a9344a 399 Pfam PF07055 Enoyl reductase FAD binding domain 326 389 1.6E-25 T 12-10-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Vc3S01_A1088 c63405d86bcd5c5df982482fc0a9344a 399 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 84 319 4.9E-98 T 12-10-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Vc3S01_0873 d5163cd1a6cb966248046dca07bce397 246 Pfam PF04344 Chemotaxis phosphatase, CheZ 37 246 9.0E-78 T 12-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 Vc3S01_0873 d5163cd1a6cb966248046dca07bce397 246 Gene3D G3DSA:1.10.287.500 55 189 9.7E-47 T 12-10-2018 Vc3S01_0873 d5163cd1a6cb966248046dca07bce397 246 SUPERFAMILY SSF75708 26 245 5.62E-66 T 12-10-2018 Vc3S01_0873 d5163cd1a6cb966248046dca07bce397 246 PIRSF PIRSF002884 13 246 1.8E-91 T 12-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 Vc3S01_A0422 cbc86a9f6e850f9db1644aedc2d2339d 786 SUPERFAMILY SSF52540 30 538 9.4E-12 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A0422 cbc86a9f6e850f9db1644aedc2d2339d 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 676 695 1.2E-6 T 12-10-2018 Vc3S01_A0422 cbc86a9f6e850f9db1644aedc2d2339d 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 646 665 1.2E-6 T 12-10-2018 Vc3S01_A0422 cbc86a9f6e850f9db1644aedc2d2339d 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 706 724 1.2E-6 T 12-10-2018 Vc3S01_A0422 cbc86a9f6e850f9db1644aedc2d2339d 786 Gene3D G3DSA:3.30.230.10 541 769 3.4E-91 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Vc3S01_A0422 cbc86a9f6e850f9db1644aedc2d2339d 786 Gene3D G3DSA:1.10.8.60 450 536 1.2E-12 T 12-10-2018 Vc3S01_A0422 cbc86a9f6e850f9db1644aedc2d2339d 786 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 649 750 4.4E-9 T 12-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 Vc3S01_A0422 cbc86a9f6e850f9db1644aedc2d2339d 786 Gene3D G3DSA:3.40.50.300 243 449 3.0E-56 T 12-10-2018 Vc3S01_A0422 cbc86a9f6e850f9db1644aedc2d2339d 786 Gene3D G3DSA:3.40.50.300 5 179 1.3E-27 T 12-10-2018 Vc3S01_A0422 cbc86a9f6e850f9db1644aedc2d2339d 786 SUPERFAMILY SSF54211 564 756 4.55E-36 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Vc3S01_A0422 cbc86a9f6e850f9db1644aedc2d2339d 786 Pfam PF13654 AAA domain 25 539 2.9E-185 T 12-10-2018 Vc3S01_A0660 d25cccf6d2121685ca86fb3c247f35fe 663 Pfam PF02316 Mu DNA-binding domain 7 135 3.4E-7 T 12-10-2018 IPR003314 Mu-type HTH domain GO:0003677 Vc3S01_A0660 d25cccf6d2121685ca86fb3c247f35fe 663 Gene3D G3DSA:2.30.30.130 492 559 1.5E-25 T 12-10-2018 IPR009004 Transposase, Mu, C-terminal Vc3S01_A0660 d25cccf6d2121685ca86fb3c247f35fe 663 Gene3D G3DSA:3.30.420.10 250 487 2.3E-82 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Vc3S01_A0660 d25cccf6d2121685ca86fb3c247f35fe 663 Pfam PF02914 Bacteriophage Mu transposase 259 472 2.5E-111 T 12-10-2018 IPR004189 Bacteriophage Mu, transposase GO:0003677|GO:0004803|GO:0006313|GO:0015074 Vc3S01_A0660 d25cccf6d2121685ca86fb3c247f35fe 663 Gene3D G3DSA:1.10.10.60 77 163 4.0E-24 T 12-10-2018 Vc3S01_A0660 d25cccf6d2121685ca86fb3c247f35fe 663 Gene3D G3DSA:1.10.10.60 180 244 1.2E-23 T 12-10-2018 Vc3S01_A0660 d25cccf6d2121685ca86fb3c247f35fe 663 Pfam PF09039 Mu DNA binding, I gamma subdomain 148 258 6.7E-41 T 12-10-2018 IPR015126 Mu DNA binding, I gamma subdomain Vc3S01_A0660 d25cccf6d2121685ca86fb3c247f35fe 663 SUPERFAMILY SSF53098 261 479 7.08E-79 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Vc3S01_A0660 d25cccf6d2121685ca86fb3c247f35fe 663 SUPERFAMILY SSF46689 176 249 1.61E-24 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_A0660 d25cccf6d2121685ca86fb3c247f35fe 663 SUPERFAMILY SSF46689 81 168 1.31E-26 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_A0660 d25cccf6d2121685ca86fb3c247f35fe 663 SUPERFAMILY SSF50610 481 559 1.7E-20 T 12-10-2018 IPR009004 Transposase, Mu, C-terminal Vc3S01_A0660 d25cccf6d2121685ca86fb3c247f35fe 663 Gene3D G3DSA:1.10.10.10 1 75 9.4E-13 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A0660 d25cccf6d2121685ca86fb3c247f35fe 663 ProDom PD223702 DNA TRANSPOSASE DNA-BINDING TRANSPOSABLE INTEGRATION ELEMENT RECOMBINATION TRANSPOSASE EXCISION TRANSPOSITION 267 479 6.0E-109 T 12-10-2018 Vc3S01_A0660 d25cccf6d2121685ca86fb3c247f35fe 663 Pfam PF09299 Mu transposase, C-terminal 487 556 4.2E-13 T 12-10-2018 IPR015378 Transposase-like, Mu, C-terminal Vc3S01_A0660 d25cccf6d2121685ca86fb3c247f35fe 663 SUPERFAMILY SSF46955 1 71 2.75E-12 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily Vc3S01_0543 42cae67bc649701f787251a0839514d2 376 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 20 374 2.4E-158 T 12-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 Vc3S01_0543 42cae67bc649701f787251a0839514d2 376 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 19 370 7.0E-170 T 12-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 Vc3S01_0543 42cae67bc649701f787251a0839514d2 376 PIRSF PIRSF015658 1 376 2.3E-178 T 12-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 Vc3S01_A0469 fc087fe41740b5e107471b77ebd1b434 318 SUPERFAMILY SSF52540 6 290 1.2E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A0469 fc087fe41740b5e107471b77ebd1b434 318 PIRSF PIRSF002849 1 318 1.6E-128 T 12-10-2018 Vc3S01_A0469 fc087fe41740b5e107471b77ebd1b434 318 Gene3D G3DSA:1.10.8.300 199 315 1.9E-39 T 12-10-2018 Vc3S01_A0469 fc087fe41740b5e107471b77ebd1b434 318 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 36 166 1.3E-62 T 12-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 Vc3S01_A0469 fc087fe41740b5e107471b77ebd1b434 318 Gene3D G3DSA:3.40.50.300 17 183 7.5E-46 T 12-10-2018 Vc3S01_A0875 c8c8bd4e7a6156384123ace63592f668 403 SUPERFAMILY SSF53901 268 400 7.3E-33 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 Vc3S01_A0875 c8c8bd4e7a6156384123ace63592f668 403 Gene3D G3DSA:3.40.47.10 7 273 5.3E-134 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 Vc3S01_A0875 c8c8bd4e7a6156384123ace63592f668 403 Gene3D G3DSA:3.40.47.10 125 397 5.3E-134 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 Vc3S01_A0875 c8c8bd4e7a6156384123ace63592f668 403 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 83 101 - T 12-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 Vc3S01_A0875 c8c8bd4e7a6156384123ace63592f668 403 Pfam PF02803 Thiolase, C-terminal domain 268 400 4.4E-35 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 Vc3S01_A0875 c8c8bd4e7a6156384123ace63592f668 403 ProSitePatterns PS00099 Thiolases active site. 383 396 - T 12-10-2018 IPR020610 Thiolase, active site GO:0016747 Vc3S01_A0875 c8c8bd4e7a6156384123ace63592f668 403 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 399 2.2E-121 T 12-10-2018 IPR002155 Thiolase GO:0016747 Vc3S01_A0875 c8c8bd4e7a6156384123ace63592f668 403 PIRSF PIRSF000429 1 402 1.7E-105 T 12-10-2018 IPR002155 Thiolase GO:0016747 Vc3S01_A0875 c8c8bd4e7a6156384123ace63592f668 403 Pfam PF00108 Thiolase, N-terminal domain 6 259 3.0E-82 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 Vc3S01_A0875 c8c8bd4e7a6156384123ace63592f668 403 SUPERFAMILY SSF53901 4 267 5.51E-76 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 Vc3S01_1967 cfc971265ad92d7fb0c0b4ee96d54af4 400 SUPERFAMILY SSF103473 8 398 5.75E-65 T 12-10-2018 IPR036259 MFS transporter superfamily Vc3S01_1967 cfc971265ad92d7fb0c0b4ee96d54af4 400 Pfam PF07690 Major Facilitator Superfamily 24 363 1.3E-49 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Vc3S01_1967 cfc971265ad92d7fb0c0b4ee96d54af4 400 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 13 395 1.3E-118 T 12-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 Vc3S01_1967 cfc971265ad92d7fb0c0b4ee96d54af4 400 Gene3D G3DSA:1.20.1720.10 17 396 2.5E-100 T 12-10-2018 Vc3S01_1162 8ab1c12ec45dac468b66e7ed458a3990 354 SUPERFAMILY SSF111369 38 166 7.98E-13 T 12-10-2018 Vc3S01_1162 8ab1c12ec45dac468b66e7ed458a3990 354 SUPERFAMILY SSF111369 178 253 8.37E-6 T 12-10-2018 Vc3S01_1162 8ab1c12ec45dac468b66e7ed458a3990 354 Gene3D G3DSA:2.40.50.100 43 234 8.1E-37 T 12-10-2018 Vc3S01_1162 8ab1c12ec45dac468b66e7ed458a3990 354 Gene3D G3DSA:1.10.287.470 77 199 8.1E-37 T 12-10-2018 Vc3S01_1162 8ab1c12ec45dac468b66e7ed458a3990 354 Pfam PF13437 HlyD family secretion protein 200 268 4.0E-6 T 12-10-2018 Vc3S01_1162 8ab1c12ec45dac468b66e7ed458a3990 354 Pfam PF13533 Biotin-lipoyl like 44 88 4.0E-16 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain Vc3S01_1162 8ab1c12ec45dac468b66e7ed458a3990 354 Gene3D G3DSA:2.40.30.170 35 310 8.1E-37 T 12-10-2018 Vc3S01_2741 6f315585dc64c98d08ca1cacbdf161f8 125 TIGRFAM TIGR04365 spare_glycyl: autonomous glycyl radical cofactor GrcA 2 125 1.9E-68 T 12-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA Vc3S01_2741 6f315585dc64c98d08ca1cacbdf161f8 125 PIRSF PIRSF000378 2 125 1.5E-53 T 12-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA Vc3S01_2741 6f315585dc64c98d08ca1cacbdf161f8 125 SUPERFAMILY SSF51998 64 124 1.51E-23 T 12-10-2018 Vc3S01_2741 6f315585dc64c98d08ca1cacbdf161f8 125 Gene3D G3DSA:3.20.70.20 53 125 2.8E-25 T 12-10-2018 Vc3S01_2741 6f315585dc64c98d08ca1cacbdf161f8 125 Pfam PF01228 Glycine radical 15 106 4.5E-23 T 12-10-2018 IPR001150 Glycine radical domain GO:0003824 Vc3S01_2741 6f315585dc64c98d08ca1cacbdf161f8 125 ProSitePatterns PS00850 Glycine radical domain signature. 95 103 - T 12-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site Vc3S01_2741 6f315585dc64c98d08ca1cacbdf161f8 125 Hamap MF_00806 Autonomous glycyl radical cofactor [grcA]. 1 125 40.901 T 12-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA Vc3S01_0545 156e18be9854e4bdfd0b07a26bcc4150 153 Pfam PF09335 SNARE associated Golgi protein 53 146 2.0E-10 T 12-10-2018 IPR032816 SNARE associated Golgi protein Vc3S01_0545 156e18be9854e4bdfd0b07a26bcc4150 153 ProDom PD085709 MEMBRANE RP436 UNCHARACTERIZED INTEGRAL PREDICTED TRANSMEMBRANE 24 128 0.002 T 12-10-2018 IPR020143 Uncharacterised protein family, RP436 Vc3S01_p20027 b118fbcf4f6b7a44b4dec308a8c4d5dd 871 Pfam PF01751 Toprim domain 4 142 7.7E-8 T 12-10-2018 IPR006171 TOPRIM domain Vc3S01_p20027 b118fbcf4f6b7a44b4dec308a8c4d5dd 871 Gene3D G3DSA:3.40.50.140 1 165 5.5E-27 T 12-10-2018 Vc3S01_p20027 b118fbcf4f6b7a44b4dec308a8c4d5dd 871 SMART SM00436 136 241 8.0E-6 T 12-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 Vc3S01_p20027 b118fbcf4f6b7a44b4dec308a8c4d5dd 871 SMART SM00437 331 624 6.2E-11 T 12-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 Vc3S01_p20027 b118fbcf4f6b7a44b4dec308a8c4d5dd 871 SMART SM00493 1 136 2.7E-7 T 12-10-2018 IPR006171 TOPRIM domain Vc3S01_p20027 b118fbcf4f6b7a44b4dec308a8c4d5dd 871 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 370 379 7.1E-17 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Vc3S01_p20027 b118fbcf4f6b7a44b4dec308a8c4d5dd 871 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 460 476 7.1E-17 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Vc3S01_p20027 b118fbcf4f6b7a44b4dec308a8c4d5dd 871 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 583 597 7.1E-17 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Vc3S01_p20027 b118fbcf4f6b7a44b4dec308a8c4d5dd 871 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 110 123 7.1E-17 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Vc3S01_p20027 b118fbcf4f6b7a44b4dec308a8c4d5dd 871 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 211 229 7.1E-17 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Vc3S01_p20027 b118fbcf4f6b7a44b4dec308a8c4d5dd 871 Pfam PF01131 DNA topoisomerase 164 649 9.3E-51 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Vc3S01_p20027 b118fbcf4f6b7a44b4dec308a8c4d5dd 871 SUPERFAMILY SSF56712 1 649 1.18E-86 T 12-10-2018 IPR023405 DNA topoisomerase, type IA, core domain Vc3S01_1606 9b09ee3f8cc31cd353d0d686445f0236 208 Gene3D G3DSA:3.30.1330.60 61 187 1.3E-31 T 12-10-2018 IPR036737 OmpA-like domain superfamily Vc3S01_1606 9b09ee3f8cc31cd353d0d686445f0236 208 PRINTS PR01021 OMPA domain signature 88 110 5.2E-10 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Vc3S01_1606 9b09ee3f8cc31cd353d0d686445f0236 208 PRINTS PR01021 OMPA domain signature 118 133 5.2E-10 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Vc3S01_1606 9b09ee3f8cc31cd353d0d686445f0236 208 PRINTS PR01021 OMPA domain signature 133 149 5.2E-10 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Vc3S01_1606 9b09ee3f8cc31cd353d0d686445f0236 208 SUPERFAMILY SSF103647 25 75 3.53E-8 T 12-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 Vc3S01_1606 9b09ee3f8cc31cd353d0d686445f0236 208 ProSitePatterns PS00018 EF-hand calcium-binding domain. 45 57 - T 12-10-2018 IPR018247 EF-Hand 1, calcium-binding site Vc3S01_1606 9b09ee3f8cc31cd353d0d686445f0236 208 Pfam PF00691 OmpA family 87 182 3.1E-19 T 12-10-2018 IPR006665 OmpA-like domain Vc3S01_1606 9b09ee3f8cc31cd353d0d686445f0236 208 SUPERFAMILY SSF103088 66 187 6.8E-32 T 12-10-2018 IPR036737 OmpA-like domain superfamily Vc3S01_0034 e9c462190184d749d0a50be4ea21d8de 417 Gene3D G3DSA:3.40.640.10 1 415 1.2E-149 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Vc3S01_0034 e9c462190184d749d0a50be4ea21d8de 417 Pfam PF00155 Aminotransferase class I and II 67 401 4.0E-28 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Vc3S01_0034 e9c462190184d749d0a50be4ea21d8de 417 SUPERFAMILY SSF53383 13 411 5.38E-62 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Vc3S01_1555 805222c7506fe92018f3b3c64749b36e 587 SUPERFAMILY SSF46689 489 585 5.38E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_1555 805222c7506fe92018f3b3c64749b36e 587 SMART SM00382 300 444 6.4E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_1555 805222c7506fe92018f3b3c64749b36e 587 Gene3D G3DSA:3.30.450.40 3 188 2.8E-45 T 12-10-2018 IPR029016 GAF-like domain superfamily Vc3S01_1555 805222c7506fe92018f3b3c64749b36e 587 Gene3D G3DSA:1.10.10.60 542 587 9.0E-9 T 12-10-2018 Vc3S01_1555 805222c7506fe92018f3b3c64749b36e 587 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 367 382 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Vc3S01_1555 805222c7506fe92018f3b3c64749b36e 587 Pfam PF01590 GAF domain 91 186 1.9E-8 T 12-10-2018 IPR003018 GAF domain GO:0005515 Vc3S01_1555 805222c7506fe92018f3b3c64749b36e 587 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 304 317 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Vc3S01_1555 805222c7506fe92018f3b3c64749b36e 587 Gene3D G3DSA:1.10.8.60 458 529 5.5E-9 T 12-10-2018 Vc3S01_1555 805222c7506fe92018f3b3c64749b36e 587 Pfam PF00158 Sigma-54 interaction domain 285 445 3.4E-62 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Vc3S01_1555 805222c7506fe92018f3b3c64749b36e 587 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 566 586 9.7E-6 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Vc3S01_1555 805222c7506fe92018f3b3c64749b36e 587 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 549 566 9.7E-6 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Vc3S01_1555 805222c7506fe92018f3b3c64749b36e 587 Pfam PF02954 Bacterial regulatory protein, Fis family 556 581 6.6E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Vc3S01_1555 805222c7506fe92018f3b3c64749b36e 587 SUPERFAMILY SSF52540 284 511 1.61E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_1555 805222c7506fe92018f3b3c64749b36e 587 Gene3D G3DSA:3.40.50.300 266 452 5.3E-58 T 12-10-2018 Vc3S01_2330 249cc06c537f10dc787355664bf3121f 223 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 28 180 2.6E-26 T 12-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ Vc3S01_2724 be75e2ddeac4f7911c7b1603b2dfd4c7 444 SUPERFAMILY SSF52540 146 380 1.94E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2724 be75e2ddeac4f7911c7b1603b2dfd4c7 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 402 419 2.7E-5 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Vc3S01_2724 be75e2ddeac4f7911c7b1603b2dfd4c7 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 419 439 2.7E-5 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Vc3S01_2724 be75e2ddeac4f7911c7b1603b2dfd4c7 444 SUPERFAMILY SSF46689 352 438 6.45E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_2724 be75e2ddeac4f7911c7b1603b2dfd4c7 444 Gene3D G3DSA:1.10.10.60 387 440 1.0E-12 T 12-10-2018 Vc3S01_2724 be75e2ddeac4f7911c7b1603b2dfd4c7 444 SUPERFAMILY SSF52172 27 190 9.45E-8 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_2724 be75e2ddeac4f7911c7b1603b2dfd4c7 444 Gene3D G3DSA:3.40.50.300 145 309 1.2E-39 T 12-10-2018 Vc3S01_2724 be75e2ddeac4f7911c7b1603b2dfd4c7 444 Pfam PF00158 Sigma-54 interaction domain 146 305 6.2E-37 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Vc3S01_2724 be75e2ddeac4f7911c7b1603b2dfd4c7 444 SMART SM00382 166 306 4.4E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_2724 be75e2ddeac4f7911c7b1603b2dfd4c7 444 Pfam PF02954 Bacterial regulatory protein, Fis family 396 435 3.7E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Vc3S01_2724 be75e2ddeac4f7911c7b1603b2dfd4c7 444 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 352 361 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Vc3S01_2724 be75e2ddeac4f7911c7b1603b2dfd4c7 444 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 170 183 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Vc3S01_2724 be75e2ddeac4f7911c7b1603b2dfd4c7 444 Gene3D G3DSA:1.10.8.60 310 386 2.0E-22 T 12-10-2018 Vc3S01_1170 a07a8150c69d1fd4b90ff2c2f47a3ccd 225 Pfam PF00072 Response regulator receiver domain 4 112 5.3E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_1170 a07a8150c69d1fd4b90ff2c2f47a3ccd 225 SUPERFAMILY SSF46894 123 222 1.02E-20 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Vc3S01_1170 a07a8150c69d1fd4b90ff2c2f47a3ccd 225 SMART SM00862 147 221 9.3E-14 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Vc3S01_1170 a07a8150c69d1fd4b90ff2c2f47a3ccd 225 SMART SM00448 2 113 1.6E-36 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_1170 a07a8150c69d1fd4b90ff2c2f47a3ccd 225 Gene3D G3DSA:3.40.50.2300 1 120 2.2E-34 T 12-10-2018 Vc3S01_1170 a07a8150c69d1fd4b90ff2c2f47a3ccd 225 Gene3D G3DSA:1.10.10.10 121 223 2.8E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_1170 a07a8150c69d1fd4b90ff2c2f47a3ccd 225 SUPERFAMILY SSF52172 1 124 3.98E-39 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_1170 a07a8150c69d1fd4b90ff2c2f47a3ccd 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 221 3.6E-16 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Vc3S01_0742 c0eea81b6e2792b5a2df07c4e1aa3ce3 450 SUPERFAMILY SSF103473 10 436 2.49E-33 T 12-10-2018 IPR036259 MFS transporter superfamily Vc3S01_0742 c0eea81b6e2792b5a2df07c4e1aa3ce3 450 Gene3D G3DSA:1.20.1250.20 248 442 4.6E-8 T 12-10-2018 Vc3S01_0742 c0eea81b6e2792b5a2df07c4e1aa3ce3 450 Pfam PF07690 Major Facilitator Superfamily 24 396 6.4E-15 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Vc3S01_0742 c0eea81b6e2792b5a2df07c4e1aa3ce3 450 Gene3D G3DSA:1.20.1250.20 11 221 7.3E-11 T 12-10-2018 Vc3S01_A1600 63d1ba93aa1c757c2fc41792b43014d0 334 Pfam PF00962 Adenosine/AMP deaminase 8 323 1.4E-74 T 12-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 Vc3S01_A1600 63d1ba93aa1c757c2fc41792b43014d0 334 Gene3D G3DSA:3.20.20.140 1 333 1.3E-104 T 12-10-2018 Vc3S01_A1600 63d1ba93aa1c757c2fc41792b43014d0 334 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 8 326 2.3E-116 T 12-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 Vc3S01_A1600 63d1ba93aa1c757c2fc41792b43014d0 334 Hamap MF_01962 Adenine deaminase. 4 316 84.187 T 12-10-2018 IPR028892 Adenine deaminase type 2 GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 Vc3S01_A1600 63d1ba93aa1c757c2fc41792b43014d0 334 SUPERFAMILY SSF51556 4 328 5.6E-90 T 12-10-2018 IPR032466 Metal-dependent hydrolase Vc3S01_2698 992bc8de57de88162baa2fb75388ad85 308 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 13 303 9.9E-133 T 12-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 Vc3S01_2698 992bc8de57de88162baa2fb75388ad85 308 Gene3D G3DSA:3.40.50.10490 8 225 1.7E-78 T 12-10-2018 Vc3S01_2698 992bc8de57de88162baa2fb75388ad85 308 Pfam PF13580 SIS domain 49 172 6.1E-9 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Vc3S01_2698 992bc8de57de88162baa2fb75388ad85 308 Gene3D G3DSA:1.10.8.1080 226 304 5.2E-31 T 12-10-2018 Vc3S01_2698 992bc8de57de88162baa2fb75388ad85 308 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 192 209 - T 12-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 Vc3S01_2698 992bc8de57de88162baa2fb75388ad85 308 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 9 302 43.651 T 12-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 Vc3S01_2698 992bc8de57de88162baa2fb75388ad85 308 SUPERFAMILY SSF53697 12 256 1.45E-72 T 12-10-2018 Vc3S01_2944 9a14000f35d62ae02a4f17b1cdf664ec 72 PRINTS PR01249 Ribosomal protein L31 signature 32 47 2.9E-23 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_2944 9a14000f35d62ae02a4f17b1cdf664ec 72 PRINTS PR01249 Ribosomal protein L31 signature 2 19 2.9E-23 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_2944 9a14000f35d62ae02a4f17b1cdf664ec 72 PRINTS PR01249 Ribosomal protein L31 signature 47 65 2.9E-23 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_2944 9a14000f35d62ae02a4f17b1cdf664ec 72 SUPERFAMILY SSF143800 1 68 1.84E-27 T 12-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_2944 9a14000f35d62ae02a4f17b1cdf664ec 72 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 69 31.851 T 12-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_2944 9a14000f35d62ae02a4f17b1cdf664ec 72 ProSitePatterns PS01143 Ribosomal protein L31 signature. 36 57 - T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_2944 9a14000f35d62ae02a4f17b1cdf664ec 72 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 67 3.9E-35 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_2944 9a14000f35d62ae02a4f17b1cdf664ec 72 Gene3D G3DSA:2.30.170.50 1 71 1.4E-33 T 12-10-2018 Vc3S01_2944 9a14000f35d62ae02a4f17b1cdf664ec 72 Pfam PF01197 Ribosomal protein L31 1 66 1.4E-32 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_2585 cf072904a380c97b450c816076931e6f 177 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 59 96 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 Vc3S01_2585 cf072904a380c97b450c816076931e6f 177 Pfam PF14437 MafB19-like deaminase 11 155 7.9E-33 T 12-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 Vc3S01_2585 cf072904a380c97b450c816076931e6f 177 Gene3D G3DSA:3.40.140.10 3 169 5.3E-64 T 12-10-2018 Vc3S01_2585 cf072904a380c97b450c816076931e6f 177 SUPERFAMILY SSF53927 5 159 2.01E-56 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Vc3S01_2585 cf072904a380c97b450c816076931e6f 177 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 14 155 45.376 T 12-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 Vc3S01_A0999 af6025e6df5e6450444a2be0777a1a7f 554 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 120 134 5.7E-12 T 12-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 Vc3S01_A0999 af6025e6df5e6450444a2be0777a1a7f 554 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 62 77 5.7E-12 T 12-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 Vc3S01_A0999 af6025e6df5e6450444a2be0777a1a7f 554 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 215 227 5.7E-12 T 12-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 Vc3S01_A0999 af6025e6df5e6450444a2be0777a1a7f 554 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 216 227 - T 12-10-2018 IPR033116 Serine proteases, trypsin family, serine active site Vc3S01_A0999 af6025e6df5e6450444a2be0777a1a7f 554 SMART SM00020 30 265 1.6E-75 T 12-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 Vc3S01_A0999 af6025e6df5e6450444a2be0777a1a7f 554 SUPERFAMILY SSF50494 25 269 3.57E-71 T 12-10-2018 IPR009003 Peptidase S1, PA clan Vc3S01_A0999 af6025e6df5e6450444a2be0777a1a7f 554 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 72 77 - T 12-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 Vc3S01_A0999 af6025e6df5e6450444a2be0777a1a7f 554 Pfam PF00089 Trypsin 31 265 7.9E-60 T 12-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 Vc3S01_A0999 af6025e6df5e6450444a2be0777a1a7f 554 Gene3D G3DSA:2.60.40.10 271 367 3.4E-5 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_A0999 af6025e6df5e6450444a2be0777a1a7f 554 Gene3D G3DSA:2.40.10.10 23 270 3.1E-72 T 12-10-2018 Vc3S01_3141 ee9e7a381193d56ba118dbad053f83b3 335 Gene3D G3DSA:3.40.50.2300 167 295 5.2E-66 T 12-10-2018 Vc3S01_3141 ee9e7a381193d56ba118dbad053f83b3 335 Gene3D G3DSA:1.10.260.40 1 67 5.9E-17 T 12-10-2018 Vc3S01_3141 ee9e7a381193d56ba118dbad053f83b3 335 Gene3D G3DSA:3.40.50.2300 70 311 5.2E-66 T 12-10-2018 Vc3S01_3141 ee9e7a381193d56ba118dbad053f83b3 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 12 30 - T 12-10-2018 Vc3S01_3141 ee9e7a381193d56ba118dbad053f83b3 335 SUPERFAMILY SSF47413 9 67 2.4E-14 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Vc3S01_3141 ee9e7a381193d56ba118dbad053f83b3 335 SMART SM00354 9 79 1.8E-25 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Vc3S01_3141 ee9e7a381193d56ba118dbad053f83b3 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 11 56 6.0E-17 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Vc3S01_3141 ee9e7a381193d56ba118dbad053f83b3 335 SUPERFAMILY SSF53822 67 322 1.92E-55 T 12-10-2018 IPR028082 Periplasmic binding protein-like I Vc3S01_3141 ee9e7a381193d56ba118dbad053f83b3 335 Pfam PF13377 Periplasmic binding protein-like domain 176 335 4.1E-29 T 12-10-2018 Vc3S01_1076 5dfe83c8b3b3b25fe5941a7d12494cfd 279 SUPERFAMILY SSF46785 12 74 9.45E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_1076 5dfe83c8b3b3b25fe5941a7d12494cfd 279 SUPERFAMILY SSF48008 79 270 1.7E-56 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Vc3S01_1076 5dfe83c8b3b3b25fe5941a7d12494cfd 279 Pfam PF07840 FadR C-terminal domain 72 274 2.0E-69 T 12-10-2018 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 Vc3S01_1076 5dfe83c8b3b3b25fe5941a7d12494cfd 279 Gene3D G3DSA:1.10.10.10 1 79 1.3E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_1076 5dfe83c8b3b3b25fe5941a7d12494cfd 279 SMART SM00345 12 71 1.6E-22 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Vc3S01_1076 5dfe83c8b3b3b25fe5941a7d12494cfd 279 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 71 3.1E-20 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Vc3S01_1076 5dfe83c8b3b3b25fe5941a7d12494cfd 279 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 3.5E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Vc3S01_1076 5dfe83c8b3b3b25fe5941a7d12494cfd 279 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 3.5E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Vc3S01_1076 5dfe83c8b3b3b25fe5941a7d12494cfd 279 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 279 138.156 T 12-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 Vc3S01_1076 5dfe83c8b3b3b25fe5941a7d12494cfd 279 TIGRFAM TIGR02812 fadR_gamma: fatty acid metabolism transcriptional regulator FadR 2 276 1.0E-114 T 12-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 Vc3S01_A1561 bc3527c52552ef90d9f8ded2c2c30f71 171 SUPERFAMILY SSF55729 4 170 1.44E-24 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_A1561 bc3527c52552ef90d9f8ded2c2c30f71 171 Pfam PF13420 Acetyltransferase (GNAT) domain 43 166 7.5E-12 T 12-10-2018 Vc3S01_A1561 bc3527c52552ef90d9f8ded2c2c30f71 171 Gene3D G3DSA:3.40.630.30 1 171 7.7E-31 T 12-10-2018 Vc3S01_0192 bef79ba9fd0ded6089a3cab637a9a6e6 447 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 5.3E-43 T 12-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Vc3S01_0192 bef79ba9fd0ded6089a3cab637a9a6e6 447 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 445 2.6E-244 T 12-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 Vc3S01_0192 bef79ba9fd0ded6089a3cab637a9a6e6 447 SUPERFAMILY SSF51246 331 444 8.37E-43 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Vc3S01_0192 bef79ba9fd0ded6089a3cab637a9a6e6 447 SMART SM00878 336 441 1.1E-63 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Vc3S01_0192 bef79ba9fd0ded6089a3cab637a9a6e6 447 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 8.2E-38 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Vc3S01_0192 bef79ba9fd0ded6089a3cab637a9a6e6 447 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Vc3S01_0192 bef79ba9fd0ded6089a3cab637a9a6e6 447 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Vc3S01_0192 bef79ba9fd0ded6089a3cab637a9a6e6 447 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 1.9E-84 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Vc3S01_0192 bef79ba9fd0ded6089a3cab637a9a6e6 447 SUPERFAMILY SSF52440 1 113 7.91E-46 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Vc3S01_0192 bef79ba9fd0ded6089a3cab637a9a6e6 447 SUPERFAMILY SSF56059 83 346 1.2E-71 T 12-10-2018 Vc3S01_0192 bef79ba9fd0ded6089a3cab637a9a6e6 447 Gene3D G3DSA:3.40.50.20 1 85 8.3E-34 T 12-10-2018 Vc3S01_0192 bef79ba9fd0ded6089a3cab637a9a6e6 447 Gene3D G3DSA:3.30.1490.20 131 203 1.8E-157 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Vc3S01_0192 bef79ba9fd0ded6089a3cab637a9a6e6 447 Gene3D G3DSA:3.30.470.20 86 433 1.8E-157 T 12-10-2018 Vc3S01_2074 9e38b8917cfbf8135b5335b4c9770d13 268 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 14 268 32.646 T 12-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 Vc3S01_2074 9e38b8917cfbf8135b5335b4c9770d13 268 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 22 268 1.5E-68 T 12-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 Vc3S01_2074 9e38b8917cfbf8135b5335b4c9770d13 268 Pfam PF08241 Methyltransferase domain 58 148 1.2E-26 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Vc3S01_2074 9e38b8917cfbf8135b5335b4c9770d13 268 SUPERFAMILY SSF53335 20 205 1.67E-45 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Vc3S01_2074 9e38b8917cfbf8135b5335b4c9770d13 268 Gene3D G3DSA:3.40.50.150 7 268 1.6E-41 T 12-10-2018 Vc3S01_p20213 78d74fb0f3f2fb3b8722135f2be5f1c8 215 SMART SM00530 15 73 1.9E-10 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Vc3S01_p20213 78d74fb0f3f2fb3b8722135f2be5f1c8 215 Pfam PF01381 Helix-turn-helix 16 64 1.6E-12 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Vc3S01_p20213 78d74fb0f3f2fb3b8722135f2be5f1c8 215 SUPERFAMILY SSF47413 9 64 3.49E-14 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Vc3S01_p20213 78d74fb0f3f2fb3b8722135f2be5f1c8 215 Gene3D G3DSA:1.10.260.40 2 89 1.0E-15 T 12-10-2018 Vc3S01_2571 741a273de46ab5ddb22bf149a22ade97 379 ProSitePatterns PS00902 Glutamate 5-kinase signature. 216 233 - T 12-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Vc3S01_2571 741a273de46ab5ddb22bf149a22ade97 379 Hamap MF_00456 Glutamate 5-kinase [proB]. 14 268 35.87 T 12-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Vc3S01_2571 741a273de46ab5ddb22bf149a22ade97 379 Gene3D G3DSA:3.40.1160.10 5 274 4.2E-87 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Vc3S01_2571 741a273de46ab5ddb22bf149a22ade97 379 SMART SM00359 286 369 3.0E-19 T 12-10-2018 IPR002478 PUA domain GO:0003723 Vc3S01_2571 741a273de46ab5ddb22bf149a22ade97 379 Pfam PF01472 PUA domain 286 360 2.8E-23 T 12-10-2018 IPR002478 PUA domain GO:0003723 Vc3S01_2571 741a273de46ab5ddb22bf149a22ade97 379 SUPERFAMILY SSF53633 15 265 3.67E-65 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Vc3S01_2571 741a273de46ab5ddb22bf149a22ade97 379 Pfam PF00696 Amino acid kinase family 15 243 1.3E-41 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Vc3S01_2571 741a273de46ab5ddb22bf149a22ade97 379 PIRSF PIRSF000729 9 378 1.6E-137 T 12-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 Vc3S01_2571 741a273de46ab5ddb22bf149a22ade97 379 TIGRFAM TIGR01027 proB: glutamate 5-kinase 14 375 6.1E-148 T 12-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Vc3S01_2571 741a273de46ab5ddb22bf149a22ade97 379 PRINTS PR00474 Glutamate 5-kinase family signature 85 113 1.3E-53 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Vc3S01_2571 741a273de46ab5ddb22bf149a22ade97 379 PRINTS PR00474 Glutamate 5-kinase family signature 218 238 1.3E-53 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Vc3S01_2571 741a273de46ab5ddb22bf149a22ade97 379 PRINTS PR00474 Glutamate 5-kinase family signature 125 146 1.3E-53 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Vc3S01_2571 741a273de46ab5ddb22bf149a22ade97 379 PRINTS PR00474 Glutamate 5-kinase family signature 157 184 1.3E-53 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Vc3S01_2571 741a273de46ab5ddb22bf149a22ade97 379 PRINTS PR00474 Glutamate 5-kinase family signature 51 65 1.3E-53 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Vc3S01_2571 741a273de46ab5ddb22bf149a22ade97 379 Gene3D G3DSA:2.30.130.10 275 377 8.3E-32 T 12-10-2018 IPR036974 PUA domain superfamily GO:0003723 Vc3S01_2571 741a273de46ab5ddb22bf149a22ade97 379 SUPERFAMILY SSF88697 286 376 5.19E-25 T 12-10-2018 IPR015947 PUA-like superfamily Vc3S01_0400 a16f07cd712e45292e5d21a458a87170 489 Gene3D G3DSA:3.40.1260.20 402 489 8.7E-7 T 12-10-2018 Vc3S01_0400 a16f07cd712e45292e5d21a458a87170 489 SUPERFAMILY SSF50249 39 128 1.35E-19 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Vc3S01_0400 a16f07cd712e45292e5d21a458a87170 489 Gene3D G3DSA:2.40.50.140 31 127 6.5E-32 T 12-10-2018 Vc3S01_0400 a16f07cd712e45292e5d21a458a87170 489 SMART SM00316 37 122 5.8E-10 T 12-10-2018 IPR022967 RNA-binding domain, S1 Vc3S01_0400 a16f07cd712e45292e5d21a458a87170 489 Pfam PF00575 S1 RNA binding domain 38 109 5.7E-6 T 12-10-2018 IPR003029 S1 domain GO:0003676 Vc3S01_0400 a16f07cd712e45292e5d21a458a87170 489 Pfam PF10150 Ribonuclease E/G family 124 393 4.2E-104 T 12-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 Vc3S01_0400 a16f07cd712e45292e5d21a458a87170 489 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 426 3.0E-173 T 12-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 Vc3S01_0488 f262e50da880627662abd7d13800cdf5 358 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 4 357 6.2E-178 T 12-10-2018 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 Vc3S01_0488 f262e50da880627662abd7d13800cdf5 358 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 171 182 - T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Vc3S01_0488 f262e50da880627662abd7d13800cdf5 358 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 100 111 - T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Vc3S01_0488 f262e50da880627662abd7d13800cdf5 358 Pfam PF01116 Fructose-bisphosphate aldolase class-II 17 354 4.0E-89 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Vc3S01_0488 f262e50da880627662abd7d13800cdf5 358 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 14 356 1.7E-109 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Vc3S01_0488 f262e50da880627662abd7d13800cdf5 358 PIRSF PIRSF001359 13 358 5.4E-94 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Vc3S01_0488 f262e50da880627662abd7d13800cdf5 358 SUPERFAMILY SSF51569 4 356 7.51E-129 T 12-10-2018 Vc3S01_0488 f262e50da880627662abd7d13800cdf5 358 Gene3D G3DSA:3.20.20.70 2 358 3.1E-145 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_A0563 21abbb6e10bda2d064a6a0975d2450f8 217 Gene3D G3DSA:3.30.1150.10 114 216 3.5E-22 T 12-10-2018 Vc3S01_A0563 21abbb6e10bda2d064a6a0975d2450f8 217 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 139 215 2.5E-22 T 12-10-2018 IPR006260 TonB/TolA, C-terminal Vc3S01_A0563 21abbb6e10bda2d064a6a0975d2450f8 217 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 138 215 1.0E-22 T 12-10-2018 IPR037682 TonB, C-terminal GO:0055085 Vc3S01_A0563 21abbb6e10bda2d064a6a0975d2450f8 217 PRINTS PR01374 Gram-negative bacterial tonB protein signature 41 51 9.3E-6 T 12-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 Vc3S01_A0563 21abbb6e10bda2d064a6a0975d2450f8 217 PRINTS PR01374 Gram-negative bacterial tonB protein signature 133 154 9.3E-6 T 12-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 Vc3S01_A0563 21abbb6e10bda2d064a6a0975d2450f8 217 SUPERFAMILY SSF74653 136 213 1.11E-21 T 12-10-2018 Vc3S01_2573 ff42548f16ce3e4fa9bfa8c264d272b6 415 Hamap MF_01063 Esterase FrsA [frsA]. 4 415 54.338 T 12-10-2018 IPR010520 UPF0255 family Vc3S01_2573 ff42548f16ce3e4fa9bfa8c264d272b6 415 Gene3D G3DSA:3.40.50.1820 18 415 3.1E-109 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_2573 ff42548f16ce3e4fa9bfa8c264d272b6 415 SUPERFAMILY SSF53474 47 411 1.38E-40 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_2573 ff42548f16ce3e4fa9bfa8c264d272b6 415 Pfam PF06500 Alpha/beta hydrolase of unknown function (DUF1100) 5 413 2.8E-228 T 12-10-2018 IPR010520 UPF0255 family Vc3S01_A1533 3657370bab75f89c20988e8fa8b47839 209 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 6 207 5.7E-85 T 12-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 Vc3S01_A1533 3657370bab75f89c20988e8fa8b47839 209 Gene3D G3DSA:3.20.20.70 1 209 7.5E-77 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_A1533 3657370bab75f89c20988e8fa8b47839 209 SUPERFAMILY SSF51569 4 207 4.94E-70 T 12-10-2018 Vc3S01_A1533 3657370bab75f89c20988e8fa8b47839 209 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 125 138 - T 12-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 Vc3S01_A1533 3657370bab75f89c20988e8fa8b47839 209 Pfam PF01081 KDPG and KHG aldolase 7 200 5.0E-77 T 12-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 Vc3S01_A1533 3657370bab75f89c20988e8fa8b47839 209 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 37 46 - T 12-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 Vc3S01_A1002 20c8a2e0180de4c8d719188c9bce0a50 249 Pfam PF06629 MltA-interacting protein MipA 25 248 1.0E-36 T 12-10-2018 IPR010583 MltA-interacting MipA Vc3S01_A1784 9261a191e5b3ddc51f6d4487947ec7f0 288 SUPERFAMILY SSF51658 30 235 2.24E-6 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily Vc3S01_A1784 9261a191e5b3ddc51f6d4487947ec7f0 288 Pfam PF05114 Protein of unknown function (DUF692) 10 268 4.6E-91 T 12-10-2018 IPR007801 Uncharacterised protein family UPF0276 Vc3S01_A1784 9261a191e5b3ddc51f6d4487947ec7f0 288 Gene3D G3DSA:3.20.20.150 6 280 3.9E-81 T 12-10-2018 Vc3S01_A1632 daa16c711834a9fb4f8d907cf1935289 289 SUPERFAMILY SSF55136 138 286 2.88E-26 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily Vc3S01_A1632 daa16c711834a9fb4f8d907cf1935289 289 Gene3D G3DSA:3.20.80.10 138 287 5.5E-28 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily Vc3S01_A1632 daa16c711834a9fb4f8d907cf1935289 289 Gene3D G3DSA:1.10.10.60 57 112 1.9E-17 T 12-10-2018 Vc3S01_A1632 daa16c711834a9fb4f8d907cf1935289 289 SUPERFAMILY SSF46689 7 57 8.96E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_A1632 daa16c711834a9fb4f8d907cf1935289 289 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 60 103 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Vc3S01_A1632 daa16c711834a9fb4f8d907cf1935289 289 SMART SM00342 23 107 3.5E-31 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_A1632 daa16c711834a9fb4f8d907cf1935289 289 SMART SM00871 137 287 1.5E-17 T 12-10-2018 IPR010499 Bacterial transcription activator, effector binding Vc3S01_A1632 daa16c711834a9fb4f8d907cf1935289 289 SUPERFAMILY SSF46689 60 110 8.06E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_A1632 daa16c711834a9fb4f8d907cf1935289 289 Pfam PF12833 Helix-turn-helix domain 29 108 2.8E-25 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_A1632 daa16c711834a9fb4f8d907cf1935289 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 76 91 2.6E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Vc3S01_A1632 daa16c711834a9fb4f8d907cf1935289 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 91 107 2.6E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Vc3S01_A1632 daa16c711834a9fb4f8d907cf1935289 289 Pfam PF06445 GyrI-like small molecule binding domain 138 286 6.7E-28 T 12-10-2018 IPR029442 GyrI-like small molecule binding domain Vc3S01_A1632 daa16c711834a9fb4f8d907cf1935289 289 Gene3D G3DSA:1.10.10.60 1 56 4.2E-15 T 12-10-2018 Vc3S01_A1633 d72e2d590162d29a379f67d634c186e1 382 Gene3D G3DSA:3.40.640.10 60 273 9.3E-112 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Vc3S01_A1633 d72e2d590162d29a379f67d634c186e1 382 Gene3D G3DSA:3.90.1150.10 15 378 9.3E-112 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Vc3S01_A1633 d72e2d590162d29a379f67d634c186e1 382 SUPERFAMILY SSF53383 3 380 1.67E-92 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Vc3S01_A1633 d72e2d590162d29a379f67d634c186e1 382 Pfam PF00155 Aminotransferase class I and II 26 375 2.9E-34 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Vc3S01_0381 d8cccf21c8ab27e19b2c97f818e1c368 216 Pfam PF04612 Type II secretion system (T2SS), protein M 7 94 1.5E-8 T 12-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 Vc3S01_0326 608d72701e584a02f1b2ac10cb4de3a9 129 Pfam PF01250 Ribosomal protein S6 3 91 3.2E-28 T 12-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_0326 608d72701e584a02f1b2ac10cb4de3a9 129 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 5.6E-38 T 12-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_0326 608d72701e584a02f1b2ac10cb4de3a9 129 Gene3D G3DSA:3.30.70.60 1 92 8.1E-33 T 12-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 Vc3S01_0326 608d72701e584a02f1b2ac10cb4de3a9 129 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 22.092 T 12-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 Vc3S01_0326 608d72701e584a02f1b2ac10cb4de3a9 129 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 12-10-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 Vc3S01_0326 608d72701e584a02f1b2ac10cb4de3a9 129 SUPERFAMILY SSF54995 1 103 3.01E-38 T 12-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_3168 151c0ba6f7a5931db0c6726d7ef6d4ef 161 Pfam PF00731 AIR carboxylase 2 150 1.7E-64 T 12-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 Vc3S01_3168 151c0ba6f7a5931db0c6726d7ef6d4ef 161 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 3 157 5.1E-67 T 12-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 Vc3S01_3168 151c0ba6f7a5931db0c6726d7ef6d4ef 161 PIRSF PIRSF001338 1 160 2.3E-68 T 12-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 Vc3S01_3168 151c0ba6f7a5931db0c6726d7ef6d4ef 161 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 3 156 32.403 T 12-10-2018 IPR033747 Class I PurE Vc3S01_3168 151c0ba6f7a5931db0c6726d7ef6d4ef 161 Gene3D G3DSA:3.40.50.7700 1 161 5.8E-73 T 12-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 Vc3S01_3168 151c0ba6f7a5931db0c6726d7ef6d4ef 161 SUPERFAMILY SSF52255 2 158 1.7E-66 T 12-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 Vc3S01_3168 151c0ba6f7a5931db0c6726d7ef6d4ef 161 SMART SM01001 1 152 2.5E-103 T 12-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 Vc3S01_0364 692de53c30f66b281256455ea2992fe9 259 PIRSF PIRSF000857 6 253 7.7E-55 T 12-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 Vc3S01_0364 692de53c30f66b281256455ea2992fe9 259 SUPERFAMILY SSF52402 26 213 1.21E-53 T 12-10-2018 Vc3S01_0364 692de53c30f66b281256455ea2992fe9 259 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 26 247 6.8E-89 T 12-10-2018 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8 Vc3S01_0364 692de53c30f66b281256455ea2992fe9 259 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 38 248 8.9E-85 T 12-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 Vc3S01_0364 692de53c30f66b281256455ea2992fe9 259 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 14 248 38.927 T 12-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 Vc3S01_0364 692de53c30f66b281256455ea2992fe9 259 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 53 224 6.5E-48 T 12-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 Vc3S01_0364 692de53c30f66b281256455ea2992fe9 259 Gene3D G3DSA:3.40.50.620 8 221 3.7E-64 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Vc3S01_0694 cc98056554131033a465b229b1cf53ec 339 SUPERFAMILY SSF51735 2 336 3.36E-97 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_0694 cc98056554131033a465b229b1cf53ec 339 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 335 4.2E-141 T 12-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 Vc3S01_0694 cc98056554131033a465b229b1cf53ec 339 Gene3D G3DSA:3.90.25.10 194 329 2.8E-144 T 12-10-2018 Vc3S01_0694 cc98056554131033a465b229b1cf53ec 339 PRINTS PR01713 Nucleotide sugar epimerase signature 231 246 1.3E-5 T 12-10-2018 Vc3S01_0694 cc98056554131033a465b229b1cf53ec 339 PRINTS PR01713 Nucleotide sugar epimerase signature 295 312 1.3E-5 T 12-10-2018 Vc3S01_0694 cc98056554131033a465b229b1cf53ec 339 PRINTS PR01713 Nucleotide sugar epimerase signature 256 271 1.3E-5 T 12-10-2018 Vc3S01_0694 cc98056554131033a465b229b1cf53ec 339 Gene3D G3DSA:3.40.50.720 3 274 2.8E-144 T 12-10-2018 Vc3S01_0694 cc98056554131033a465b229b1cf53ec 339 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 324 4.7E-58 T 12-10-2018 IPR016040 NAD(P)-binding domain Vc3S01_1612 29ad3cd079d49e0c51ee78399cf2ea4a 109 SUPERFAMILY SSF69721 2 109 6.41E-41 T 12-10-2018 IPR025526 DsrC-like domain superfamily Vc3S01_1612 29ad3cd079d49e0c51ee78399cf2ea4a 109 Gene3D G3DSA:3.30.1420.10 2 38 1.7E-12 T 12-10-2018 Vc3S01_1612 29ad3cd079d49e0c51ee78399cf2ea4a 109 PIRSF PIRSF006223 2 109 1.9E-40 T 12-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE Vc3S01_1612 29ad3cd079d49e0c51ee78399cf2ea4a 109 Gene3D G3DSA:1.10.10.370 39 109 1.4E-30 T 12-10-2018 Vc3S01_1612 29ad3cd079d49e0c51ee78399cf2ea4a 109 Pfam PF04358 DsrC like protein 4 109 1.2E-43 T 12-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE Vc3S01_1612 29ad3cd079d49e0c51ee78399cf2ea4a 109 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 4 109 2.1E-49 T 12-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE Vc3S01_0176 d6d504bd743576392c9be5190187ee50 429 Gene3D G3DSA:3.90.600.10 330 429 6.6E-35 T 12-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Vc3S01_0176 d6d504bd743576392c9be5190187ee50 429 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 423 2.7E-186 T 12-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Vc3S01_0176 d6d504bd743576392c9be5190187ee50 429 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 12-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Vc3S01_0176 d6d504bd743576392c9be5190187ee50 429 SUPERFAMILY SSF51246 329 424 2.51E-33 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Vc3S01_0176 d6d504bd743576392c9be5190187ee50 429 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 423 44.127 T 12-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Vc3S01_0176 d6d504bd743576392c9be5190187ee50 429 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 1.9E-35 T 12-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Vc3S01_0176 d6d504bd743576392c9be5190187ee50 429 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 332 421 3.0E-29 T 12-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Vc3S01_0176 d6d504bd743576392c9be5190187ee50 429 SUPERFAMILY SSF56059 104 319 1.94E-67 T 12-10-2018 Vc3S01_0176 d6d504bd743576392c9be5190187ee50 429 Gene3D G3DSA:3.40.50.20 2 95 7.8E-38 T 12-10-2018 Vc3S01_0176 d6d504bd743576392c9be5190187ee50 429 SMART SM01209 103 296 1.2E-141 T 12-10-2018 Vc3S01_0176 d6d504bd743576392c9be5190187ee50 429 SUPERFAMILY SSF52440 1 103 1.4E-36 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Vc3S01_0176 d6d504bd743576392c9be5190187ee50 429 SMART SM01210 330 423 1.9E-55 T 12-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Vc3S01_0176 d6d504bd743576392c9be5190187ee50 429 Gene3D G3DSA:3.30.470.20 191 329 1.9E-62 T 12-10-2018 Vc3S01_0176 d6d504bd743576392c9be5190187ee50 429 Gene3D G3DSA:3.30.1490.20 121 190 6.3E-29 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Vc3S01_0176 d6d504bd743576392c9be5190187ee50 429 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 8.5E-83 T 12-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Vc3S01_1417 2d4a7a713889b46846603aaa2b1bcf19 205 Pfam PF13460 NAD(P)H-binding 3 187 4.1E-33 T 12-10-2018 IPR016040 NAD(P)-binding domain Vc3S01_1417 2d4a7a713889b46846603aaa2b1bcf19 205 Gene3D G3DSA:3.40.50.720 1 204 1.8E-37 T 12-10-2018 Vc3S01_1417 2d4a7a713889b46846603aaa2b1bcf19 205 SUPERFAMILY SSF51735 1 202 1.95E-32 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_3077 893d66da11db6608edd143f5ecb9db52 467 Gene3D G3DSA:3.40.50.300 132 312 6.6E-67 T 12-10-2018 Vc3S01_3077 893d66da11db6608edd143f5ecb9db52 467 SUPERFAMILY SSF46689 382 466 6.27E-20 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_3077 893d66da11db6608edd143f5ecb9db52 467 Pfam PF00158 Sigma-54 interaction domain 142 308 6.8E-71 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Vc3S01_3077 893d66da11db6608edd143f5ecb9db52 467 SMART SM00448 4 115 3.1E-33 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_3077 893d66da11db6608edd143f5ecb9db52 467 SUPERFAMILY SSF52172 2 187 1.85E-43 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_3077 893d66da11db6608edd143f5ecb9db52 467 Pfam PF00072 Response regulator receiver domain 6 115 1.6E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_3077 893d66da11db6608edd143f5ecb9db52 467 Gene3D G3DSA:1.10.8.60 313 380 2.5E-17 T 12-10-2018 Vc3S01_3077 893d66da11db6608edd143f5ecb9db52 467 Gene3D G3DSA:3.40.50.2300 1 124 2.2E-40 T 12-10-2018 Vc3S01_3077 893d66da11db6608edd143f5ecb9db52 467 Pfam PF02954 Bacterial regulatory protein, Fis family 426 466 2.7E-16 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Vc3S01_3077 893d66da11db6608edd143f5ecb9db52 467 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 355 364 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Vc3S01_3077 893d66da11db6608edd143f5ecb9db52 467 SUPERFAMILY SSF52540 141 385 1.02E-73 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_3077 893d66da11db6608edd143f5ecb9db52 467 Gene3D G3DSA:1.10.10.60 381 467 1.9E-26 T 12-10-2018 Vc3S01_3077 893d66da11db6608edd143f5ecb9db52 467 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 432 449 1.3E-7 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Vc3S01_3077 893d66da11db6608edd143f5ecb9db52 467 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 449 467 1.3E-7 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Vc3S01_3077 893d66da11db6608edd143f5ecb9db52 467 SMART SM00382 162 316 1.3E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_3077 893d66da11db6608edd143f5ecb9db52 467 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 166 179 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Vc3S01_3077 893d66da11db6608edd143f5ecb9db52 467 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 228 243 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Vc3S01_3077 893d66da11db6608edd143f5ecb9db52 467 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 6 466 9.1E-238 T 12-10-2018 IPR010114 DNA-binding transcriptional regulator NtrC GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 Vc3S01_2212 3914ff415c3e3ea92226011ab7777e95 1489 Gene3D G3DSA:1.20.58.850 623 833 7.3E-136 T 12-10-2018 Vc3S01_2212 3914ff415c3e3ea92226011ab7777e95 1489 Gene3D G3DSA:3.40.1140.10 3 229 1.2E-97 T 12-10-2018 Vc3S01_2212 3914ff415c3e3ea92226011ab7777e95 1489 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1339 1427 1.0E-14 T 12-10-2018 Vc3S01_2212 3914ff415c3e3ea92226011ab7777e95 1489 Pfam PF04310 MukB N-terminal 4 229 5.0E-121 T 12-10-2018 IPR007406 MukB, N-terminal domain GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 Vc3S01_2212 3914ff415c3e3ea92226011ab7777e95 1489 SUPERFAMILY SSF52540 28 226 1.22E-22 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2212 3914ff415c3e3ea92226011ab7777e95 1489 Gene3D G3DSA:1.20.58.850 585 855 7.3E-136 T 12-10-2018 Vc3S01_2212 3914ff415c3e3ea92226011ab7777e95 1489 Pfam PF16330 MukB hinge domain 649 813 1.4E-72 T 12-10-2018 IPR032520 MukB, hinge domain Vc3S01_2212 3914ff415c3e3ea92226011ab7777e95 1489 Hamap MF_01800 Chromosome partition protein MukB [mukB]. 3 1474 10.934 T 12-10-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 Vc3S01_2212 3914ff415c3e3ea92226011ab7777e95 1489 Gene3D G3DSA:3.40.1140.10 1385 1471 8.0E-39 T 12-10-2018 Vc3S01_2212 3914ff415c3e3ea92226011ab7777e95 1489 PIRSF PIRSF005246 3 1489 0.0 T 12-10-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 Vc3S01_2212 3914ff415c3e3ea92226011ab7777e95 1489 Gene3D G3DSA:1.20.1060.30 670 781 7.3E-136 T 12-10-2018 Vc3S01_0722 51bd3c3da6b070d05b44b22c343c8722 607 Pfam PF11893 Domain of unknown function (DUF3413) 3 242 8.7E-52 T 12-10-2018 IPR024588 Inner membrane protein YejM, N-terminal Vc3S01_0722 51bd3c3da6b070d05b44b22c343c8722 607 Gene3D G3DSA:3.40.720.10 240 549 7.3E-52 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Vc3S01_0722 51bd3c3da6b070d05b44b22c343c8722 607 SUPERFAMILY SSF53649 246 571 3.27E-58 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Vc3S01_0722 51bd3c3da6b070d05b44b22c343c8722 607 Pfam PF00884 Sulfatase 250 519 4.5E-31 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 Vc3S01_0722 51bd3c3da6b070d05b44b22c343c8722 607 PIRSF PIRSF004950 1 606 4.5E-228 T 12-10-2018 IPR012159 Inner membrane protein YejM Vc3S01_0796 65065004aff7f539a0f087405ef1ac7c 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 6 151 1.1E-63 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Vc3S01_0796 65065004aff7f539a0f087405ef1ac7c 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 319 50.711 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Vc3S01_0796 65065004aff7f539a0f087405ef1ac7c 319 SUPERFAMILY SSF52096 5 318 1.15E-105 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Vc3S01_0796 65065004aff7f539a0f087405ef1ac7c 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 319 9.6E-164 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Vc3S01_0796 65065004aff7f539a0f087405ef1ac7c 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 172 185 8.3E-49 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Vc3S01_0796 65065004aff7f539a0f087405ef1ac7c 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 200 209 8.3E-49 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Vc3S01_0796 65065004aff7f539a0f087405ef1ac7c 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 156 169 8.3E-49 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Vc3S01_0796 65065004aff7f539a0f087405ef1ac7c 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 116 134 8.3E-49 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Vc3S01_0796 65065004aff7f539a0f087405ef1ac7c 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 137 153 8.3E-49 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Vc3S01_0796 65065004aff7f539a0f087405ef1ac7c 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 91 102 8.3E-49 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Vc3S01_0796 65065004aff7f539a0f087405ef1ac7c 319 Gene3D G3DSA:3.90.226.10 4 319 3.0E-121 T 12-10-2018 Vc3S01_2798 d3f0916956a34c76b8438393e9ca6f42 367 Gene3D G3DSA:3.40.50.300 16 195 1.1E-22 T 12-10-2018 Vc3S01_2798 d3f0916956a34c76b8438393e9ca6f42 367 Pfam PF03969 AFG1-like ATPase 1 364 2.8E-155 T 12-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 Vc3S01_2798 d3f0916956a34c76b8438393e9ca6f42 367 Hamap MF_01919 Cell division protein ZapE [zapE]. 1 367 53.305 T 12-10-2018 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 Vc3S01_2798 d3f0916956a34c76b8438393e9ca6f42 367 SUPERFAMILY SSF52540 61 193 4.97E-15 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2200 c3f2230345cf095713cd25ceeb04dc2c 277 Gene3D G3DSA:3.20.20.410 1 256 1.1E-41 T 12-10-2018 IPR036520 UPF0759 superfamily Vc3S01_2200 c3f2230345cf095713cd25ceeb04dc2c 277 Pfam PF01904 Protein of unknown function DUF72 12 251 1.4E-55 T 12-10-2018 IPR002763 Protein of unknown function DUF72 Vc3S01_2200 c3f2230345cf095713cd25ceeb04dc2c 277 SUPERFAMILY SSF117396 1 254 4.45E-71 T 12-10-2018 IPR036520 UPF0759 superfamily Vc3S01_1653 5d5f21937f37c6d7285492f578762217 475 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 15 445 1.8E-115 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_1653 5d5f21937f37c6d7285492f578762217 475 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 9 466 3.3E-230 T 12-10-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 Vc3S01_1653 5d5f21937f37c6d7285492f578762217 475 Gene3D G3DSA:1.20.210.10 4 472 2.2E-205 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_1653 5d5f21937f37c6d7285492f578762217 475 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 205 260 - T 12-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_1653 5d5f21937f37c6d7285492f578762217 475 SUPERFAMILY SSF81442 11 465 4.84E-122 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A1715 07d892819c64bd0d29de62708834b72a 505 SUPERFAMILY SSF56024 40 237 9.68E-39 T 12-10-2018 Vc3S01_A1715 07d892819c64bd0d29de62708834b72a 505 Gene3D G3DSA:3.30.870.10 57 253 1.4E-35 T 12-10-2018 Vc3S01_A1715 07d892819c64bd0d29de62708834b72a 505 Pfam PF13091 PLD-like domain 76 224 1.5E-16 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Vc3S01_A1715 07d892819c64bd0d29de62708834b72a 505 Pfam PF13091 PLD-like domain 311 445 1.4E-24 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Vc3S01_A1715 07d892819c64bd0d29de62708834b72a 505 Gene3D G3DSA:3.30.870.10 286 466 1.9E-41 T 12-10-2018 Vc3S01_A1715 07d892819c64bd0d29de62708834b72a 505 SUPERFAMILY SSF56024 281 459 1.53E-36 T 12-10-2018 Vc3S01_A1715 07d892819c64bd0d29de62708834b72a 505 SMART SM00155 399 426 3.6E-6 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 Vc3S01_A1715 07d892819c64bd0d29de62708834b72a 505 SMART SM00155 165 192 0.0098 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 Vc3S01_2683 12a841204163cb94e9704678c91a7c53 325 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 15 313 2.1E-105 T 12-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 Vc3S01_2683 12a841204163cb94e9704678c91a7c53 325 SMART SM00363 18 83 3.1E-9 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_2683 12a841204163cb94e9704678c91a7c53 325 Pfam PF00849 RNA pseudouridylate synthase 92 241 1.5E-30 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Vc3S01_2683 12a841204163cb94e9704678c91a7c53 325 Pfam PF01479 S4 domain 18 65 9.0E-10 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_2683 12a841204163cb94e9704678c91a7c53 325 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 12-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Vc3S01_2683 12a841204163cb94e9704678c91a7c53 325 SUPERFAMILY SSF55120 77 316 1.3E-80 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Vc3S01_2683 12a841204163cb94e9704678c91a7c53 325 Gene3D G3DSA:3.10.290.10 2 76 5.2E-24 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Vc3S01_2683 12a841204163cb94e9704678c91a7c53 325 Gene3D G3DSA:3.30.2350.10 85 316 4.2E-73 T 12-10-2018 Vc3S01_2683 12a841204163cb94e9704678c91a7c53 325 SUPERFAMILY SSF55174 17 68 3.7E-11 T 12-10-2018 Vc3S01_1286 99fe204be156d438a67262c23644dd44 195 SUPERFAMILY SSF109604 4 182 2.45E-42 T 12-10-2018 Vc3S01_1286 99fe204be156d438a67262c23644dd44 195 Gene3D G3DSA:1.10.3210.10 1 195 3.5E-53 T 12-10-2018 Vc3S01_1286 99fe204be156d438a67262c23644dd44 195 Pfam PF13023 HD domain 15 172 6.3E-52 T 12-10-2018 IPR006674 HD domain Vc3S01_0052 0c836ae90b2ab733669de4a30e0a3ace 127 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 7 125 18.845 T 12-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 Vc3S01_0052 0c836ae90b2ab733669de4a30e0a3ace 127 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 9 120 1.2E-23 T 12-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 Vc3S01_0052 0c836ae90b2ab733669de4a30e0a3ace 127 TIGRFAM TIGR00494 crcB: protein CrcB 10 123 1.1E-29 T 12-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 Vc3S01_2253 76d31048b5690567e9bc0401804b8283 246 Gene3D G3DSA:3.20.20.70 2 246 6.8E-105 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_2253 76d31048b5690567e9bc0401804b8283 246 ProSitePatterns PS01087 Radical activating enzymes signature. 18 39 - T 12-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 Vc3S01_2253 76d31048b5690567e9bc0401804b8283 246 Pfam PF13353 4Fe-4S single cluster domain 16 150 2.5E-21 T 12-10-2018 Vc3S01_2253 76d31048b5690567e9bc0401804b8283 246 Pfam PF04055 Radical SAM superfamily 24 178 1.6E-33 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Vc3S01_2253 76d31048b5690567e9bc0401804b8283 246 SUPERFAMILY SSF102114 23 219 3.14E-30 T 12-10-2018 Vc3S01_2253 76d31048b5690567e9bc0401804b8283 246 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 6 239 3.9E-107 T 12-10-2018 IPR012838 Pyruvate formate-lyase 1 activating enzyme GO:0043365|GO:0055114 Vc3S01_2253 76d31048b5690567e9bc0401804b8283 246 PIRSF PIRSF000371 1 48 2.1E-11 T 12-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 Vc3S01_2253 76d31048b5690567e9bc0401804b8283 246 PIRSF PIRSF000371 44 245 6.9E-45 T 12-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 Vc3S01_1584 8af6ae3cd7c660eb6edaa9ec0b6c404d 660 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 19 509 7.2E-127 T 12-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset Vc3S01_1584 8af6ae3cd7c660eb6edaa9ec0b6c404d 660 Gene3D G3DSA:3.30.1920.30 226 292 9.9E-59 T 12-10-2018 Vc3S01_1584 8af6ae3cd7c660eb6edaa9ec0b6c404d 660 Gene3D G3DSA:2.30.110.50 24 336 9.9E-59 T 12-10-2018 Vc3S01_1584 8af6ae3cd7c660eb6edaa9ec0b6c404d 660 Gene3D G3DSA:3.55.50.10 103 194 9.9E-59 T 12-10-2018 Vc3S01_1584 8af6ae3cd7c660eb6edaa9ec0b6c404d 660 Gene3D G3DSA:2.40.50.230 351 451 7.3E-35 T 12-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily Vc3S01_1584 8af6ae3cd7c660eb6edaa9ec0b6c404d 660 Pfam PF05954 Phage late control gene D protein (GPD) 31 332 1.4E-51 T 12-10-2018 Vc3S01_1584 8af6ae3cd7c660eb6edaa9ec0b6c404d 660 SUPERFAMILY SSF69349 436 578 1.02E-26 T 12-10-2018 Vc3S01_1584 8af6ae3cd7c660eb6edaa9ec0b6c404d 660 SUPERFAMILY SSF69279 19 189 7.23E-42 T 12-10-2018 Vc3S01_1584 8af6ae3cd7c660eb6edaa9ec0b6c404d 660 SUPERFAMILY SSF69255 361 446 1.02E-25 T 12-10-2018 Vc3S01_1584 8af6ae3cd7c660eb6edaa9ec0b6c404d 660 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 28 493 4.9E-90 T 12-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein Vc3S01_0238 07a77040a56af964a7b81e229e5804d1 154 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 99 121 1.8E-38 T 12-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 Vc3S01_0238 07a77040a56af964a7b81e229e5804d1 154 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 125 143 1.8E-38 T 12-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 Vc3S01_0238 07a77040a56af964a7b81e229e5804d1 154 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 15 32 1.8E-38 T 12-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 Vc3S01_0238 07a77040a56af964a7b81e229e5804d1 154 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 75 95 1.8E-38 T 12-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 Vc3S01_0238 07a77040a56af964a7b81e229e5804d1 154 Gene3D G3DSA:3.10.420.10 4 154 5.8E-58 T 12-10-2018 IPR035958 SecB-like superfamily Vc3S01_0238 07a77040a56af964a7b81e229e5804d1 154 Pfam PF02556 Preprotein translocase subunit SecB 7 146 3.6E-55 T 12-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 Vc3S01_0238 07a77040a56af964a7b81e229e5804d1 154 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 8 146 5.8E-59 T 12-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 Vc3S01_0238 07a77040a56af964a7b81e229e5804d1 154 SUPERFAMILY SSF54611 4 143 8.28E-52 T 12-10-2018 IPR035958 SecB-like superfamily Vc3S01_0238 07a77040a56af964a7b81e229e5804d1 154 Hamap MF_00821 Protein-export protein SecB [secB]. 1 147 32.015 T 12-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 Vc3S01_2614 c089a77d068ae94c609d23b49a264b3f 326 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 5.5E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_2614 c089a77d068ae94c609d23b49a264b3f 326 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 70 81 5.5E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_2614 c089a77d068ae94c609d23b49a264b3f 326 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 60 70 5.5E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_2614 c089a77d068ae94c609d23b49a264b3f 326 SUPERFAMILY SSF53850 118 325 2.53E-27 T 12-10-2018 Vc3S01_2614 c089a77d068ae94c609d23b49a264b3f 326 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 37 92 6.4E-20 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_2614 c089a77d068ae94c609d23b49a264b3f 326 SUPERFAMILY SSF46785 35 140 5.69E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_2614 c089a77d068ae94c609d23b49a264b3f 326 Gene3D G3DSA:3.40.190.10 189 297 9.1E-48 T 12-10-2018 Vc3S01_2614 c089a77d068ae94c609d23b49a264b3f 326 Pfam PF03466 LysR substrate binding domain 118 320 7.7E-27 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_2614 c089a77d068ae94c609d23b49a264b3f 326 Gene3D G3DSA:3.40.190.10 129 320 9.1E-48 T 12-10-2018 Vc3S01_2614 c089a77d068ae94c609d23b49a264b3f 326 Gene3D G3DSA:1.10.10.10 34 123 5.4E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A1361 318565c97a7eade1be9506e74d84f830 717 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 10 711 1.2E-242 T 12-10-2018 IPR010020 Integral membrane protein, YccS/YhfK Vc3S01_A1361 318565c97a7eade1be9506e74d84f830 717 Pfam PF13515 Fusaric acid resistance protein-like 405 523 2.9E-22 T 12-10-2018 Vc3S01_A1361 318565c97a7eade1be9506e74d84f830 717 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 10 712 0.0 T 12-10-2018 IPR010019 Integral membrane protein, YccS Vc3S01_A1361 318565c97a7eade1be9506e74d84f830 717 Pfam PF12805 FUSC-like inner membrane protein yccS 68 348 1.6E-114 T 12-10-2018 IPR032692 Integral membrane protein YccS, N-terminal Vc3S01_A1213 8c0fadc1f5c9b09ea3cc148101fdcada 223 Pfam PF08887 GAD-like domain 5 109 6.1E-36 T 12-10-2018 IPR014983 GAD-related Vc3S01_A1213 8c0fadc1f5c9b09ea3cc148101fdcada 223 Pfam PF08906 Domain of unknown function (DUF1851) 132 202 7.4E-9 T 12-10-2018 IPR015002 Domain of unknown function DUF1851 Vc3S01_2817 27ecf1d1def8210ddb8602aba4f52ae8 576 Gene3D G3DSA:1.10.246.130 266 387 5.4E-31 T 12-10-2018 Vc3S01_2817 27ecf1d1def8210ddb8602aba4f52ae8 576 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 147 166 1.7E-58 T 12-10-2018 Vc3S01_2817 27ecf1d1def8210ddb8602aba4f52ae8 576 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 249 265 1.7E-58 T 12-10-2018 Vc3S01_2817 27ecf1d1def8210ddb8602aba4f52ae8 576 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 279 298 1.7E-58 T 12-10-2018 Vc3S01_2817 27ecf1d1def8210ddb8602aba4f52ae8 576 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 469 486 1.7E-58 T 12-10-2018 Vc3S01_2817 27ecf1d1def8210ddb8602aba4f52ae8 576 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 444 459 1.7E-58 T 12-10-2018 Vc3S01_2817 27ecf1d1def8210ddb8602aba4f52ae8 576 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 129 147 1.7E-58 T 12-10-2018 Vc3S01_2817 27ecf1d1def8210ddb8602aba4f52ae8 576 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 408 426 1.7E-58 T 12-10-2018 Vc3S01_2817 27ecf1d1def8210ddb8602aba4f52ae8 576 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 56 81 1.7E-58 T 12-10-2018 Vc3S01_2817 27ecf1d1def8210ddb8602aba4f52ae8 576 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 386 404 1.7E-58 T 12-10-2018 Vc3S01_2817 27ecf1d1def8210ddb8602aba4f52ae8 576 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 35 568 4.5E-116 T 12-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 Vc3S01_2817 27ecf1d1def8210ddb8602aba4f52ae8 576 SUPERFAMILY SSF56235 26 570 1.93E-144 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Vc3S01_2817 27ecf1d1def8210ddb8602aba4f52ae8 576 Gene3D G3DSA:3.60.20.40 388 575 1.0E-46 T 12-10-2018 Vc3S01_2817 27ecf1d1def8210ddb8602aba4f52ae8 576 Pfam PF01019 Gamma-glutamyltranspeptidase 49 570 3.7E-138 T 12-10-2018 Vc3S01_0744 0a18811dca8eb0d62541a875c9b7cdf1 189 Pfam PF03923 Uncharacterized lipoprotein 28 186 1.8E-51 T 12-10-2018 IPR005619 Uncharacterised protein family, YajG Vc3S01_A1788 4f95422e2c851fcb2303387a6ac7ba2f 378 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 361 7.5E-96 T 12-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 Vc3S01_A1788 4f95422e2c851fcb2303387a6ac7ba2f 378 PIRSF PIRSF000267 2 377 7.1E-111 T 12-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 Vc3S01_A1788 4f95422e2c851fcb2303387a6ac7ba2f 378 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 378 1.2E-146 T 12-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 Vc3S01_2868 95e7dee10e41fe57177f9c89c7fa1828 268 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 266 3.1E-118 T 12-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 Vc3S01_2868 95e7dee10e41fe57177f9c89c7fa1828 268 PIRSF PIRSF000903 1 268 2.8E-119 T 12-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 Vc3S01_2868 95e7dee10e41fe57177f9c89c7fa1828 268 Pfam PF00149 Calcineurin-like phosphoesterase 4 167 1.1E-13 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Vc3S01_2868 95e7dee10e41fe57177f9c89c7fa1828 268 SUPERFAMILY SSF56300 3 252 9.43E-56 T 12-10-2018 Vc3S01_2868 95e7dee10e41fe57177f9c89c7fa1828 268 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 268 46.954 T 12-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 Vc3S01_2868 95e7dee10e41fe57177f9c89c7fa1828 268 Gene3D G3DSA:3.60.21.10 1 268 1.6E-76 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like Vc3S01_A1294 3e93a845acdacfd1325c1266904080b8 136 Gene3D G3DSA:3.10.450.40 6 117 2.3E-11 T 12-10-2018 Vc3S01_A1294 3e93a845acdacfd1325c1266904080b8 136 Pfam PF04965 Gene 25-like lysozyme 28 115 4.6E-18 T 12-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD Vc3S01_A1294 3e93a845acdacfd1325c1266904080b8 136 SUPERFAMILY SSF160719 28 131 1.11E-20 T 12-10-2018 Vc3S01_A1294 3e93a845acdacfd1325c1266904080b8 136 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 6 136 2.5E-38 T 12-10-2018 IPR017737 Type VI secretion system, lysozyme-related protein Vc3S01_1567 cb5e48f0ebc441cd92f14edd97afea2e 1129 Pfam PF06744 Type VI secretion protein IcmF C-terminal 885 1079 1.3E-44 T 12-10-2018 IPR010623 Type VI secretion system IcmF, C-terminal Vc3S01_1567 cb5e48f0ebc441cd92f14edd97afea2e 1129 Pfam PF06761 Intracellular multiplication and human macrophage-killing 486 767 1.5E-35 T 12-10-2018 IPR009612 ImcF-related Vc3S01_1567 cb5e48f0ebc441cd92f14edd97afea2e 1129 Pfam PF14331 ImcF-related N-terminal domain 173 418 1.2E-53 T 12-10-2018 IPR025743 ImcF-related, N-terminal domain Vc3S01_1567 cb5e48f0ebc441cd92f14edd97afea2e 1129 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 173 1126 1.6E-143 T 12-10-2018 IPR017731 Type VI secretion system, IcmF Vc3S01_3137 69392a96f3d15c14ad3cca4035202b90 598 Hamap MF_02094 Phosphogluconate dehydratase [edd]. 2 598 53.406 T 12-10-2018 Vc3S01_3137 69392a96f3d15c14ad3cca4035202b90 598 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 5 596 5.6E-248 T 12-10-2018 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12 Vc3S01_3137 69392a96f3d15c14ad3cca4035202b90 598 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 504 515 - T 12-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Vc3S01_3137 69392a96f3d15c14ad3cca4035202b90 598 SUPERFAMILY SSF143975 3 417 2.75E-130 T 12-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Vc3S01_3137 69392a96f3d15c14ad3cca4035202b90 598 SUPERFAMILY SSF52016 418 596 3.92E-52 T 12-10-2018 Vc3S01_3137 69392a96f3d15c14ad3cca4035202b90 598 Pfam PF00920 Dehydratase family 68 594 3.2E-149 T 12-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Vc3S01_3137 69392a96f3d15c14ad3cca4035202b90 598 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 155 165 - T 12-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Vc3S01_3137 69392a96f3d15c14ad3cca4035202b90 598 Gene3D G3DSA:3.50.30.80 418 563 2.5E-48 T 12-10-2018 Vc3S01_0026 4e809e157f27cac4af7937c85217957c 245 SMART SM00382 26 216 8.1E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_0026 4e809e157f27cac4af7937c85217957c 245 SUPERFAMILY SSF52540 1 238 1.18E-75 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0026 4e809e157f27cac4af7937c85217957c 245 Pfam PF00005 ABC transporter 17 168 4.9E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_0026 4e809e157f27cac4af7937c85217957c 245 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_0026 4e809e157f27cac4af7937c85217957c 245 PIRSF PIRSF039085 1 244 1.7E-104 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 Vc3S01_0026 4e809e157f27cac4af7937c85217957c 245 Gene3D G3DSA:3.40.50.300 1 243 3.8E-76 T 12-10-2018 Vc3S01_A0955 870c1ebff7477332b5d2ee797bfe9f2c 134 SUPERFAMILY SSF117856 4 131 1.15E-37 T 12-10-2018 Vc3S01_A0955 870c1ebff7477332b5d2ee797bfe9f2c 134 Pfam PF03479 Domain of unknown function (DUF296) 5 110 4.1E-24 T 12-10-2018 IPR005175 PPC domain Vc3S01_A0955 870c1ebff7477332b5d2ee797bfe9f2c 134 Gene3D G3DSA:3.30.1330.80 2 134 1.1E-47 T 12-10-2018 Vc3S01_A0108 e2548f3663b567d556243d3771deac15 327 Pfam PF00005 ABC transporter 35 188 1.8E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_A0108 e2548f3663b567d556243d3771deac15 327 ProSitePatterns PS00211 ABC transporters family signature. 161 175 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_A0108 e2548f3663b567d556243d3771deac15 327 SMART SM00382 43 238 3.9E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_A0108 e2548f3663b567d556243d3771deac15 327 SUPERFAMILY SSF52540 10 259 5.32E-67 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A0108 e2548f3663b567d556243d3771deac15 327 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 240 305 6.3E-15 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Vc3S01_A0108 e2548f3663b567d556243d3771deac15 327 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 238 324 2.6E-21 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Vc3S01_A0108 e2548f3663b567d556243d3771deac15 327 Gene3D G3DSA:3.40.50.300 8 327 2.4E-83 T 12-10-2018 Vc3S01_1548 f6845bdf7e90093382aab5d1eb3feb72 500 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 193 486 1.0E-114 T 12-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Vc3S01_1548 f6845bdf7e90093382aab5d1eb3feb72 500 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 10 191 6.1E-65 T 12-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Vc3S01_1548 f6845bdf7e90093382aab5d1eb3feb72 500 Gene3D G3DSA:3.40.50.720 4 179 1.7E-60 T 12-10-2018 Vc3S01_1548 f6845bdf7e90093382aab5d1eb3feb72 500 SUPERFAMILY SSF51735 4 194 1.84E-62 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_1548 f6845bdf7e90093382aab5d1eb3feb72 500 Gene3D G3DSA:3.30.360.10 180 488 2.8E-124 T 12-10-2018 Vc3S01_1548 f6845bdf7e90093382aab5d1eb3feb72 500 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 6 486 3.7E-203 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Vc3S01_1548 f6845bdf7e90093382aab5d1eb3feb72 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 171 199 1.6E-49 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Vc3S01_1548 f6845bdf7e90093382aab5d1eb3feb72 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 332 358 1.6E-49 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Vc3S01_1548 f6845bdf7e90093382aab5d1eb3feb72 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 223 240 1.6E-49 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Vc3S01_1548 f6845bdf7e90093382aab5d1eb3feb72 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 147 160 1.6E-49 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Vc3S01_1548 f6845bdf7e90093382aab5d1eb3feb72 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 241 257 1.6E-49 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Vc3S01_1548 f6845bdf7e90093382aab5d1eb3feb72 500 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 6 487 85.222 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Vc3S01_1548 f6845bdf7e90093382aab5d1eb3feb72 500 PIRSF PIRSF000110 3 489 5.7E-179 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Vc3S01_1548 f6845bdf7e90093382aab5d1eb3feb72 500 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 181 187 - T 12-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Vc3S01_1548 f6845bdf7e90093382aab5d1eb3feb72 500 SUPERFAMILY SSF55347 181 489 8.5E-113 T 12-10-2018 Vc3S01_1663 f286147f9d20aad1f84495e6f39a254a 254 SUPERFAMILY SSF52402 97 247 1.33E-23 T 12-10-2018 Vc3S01_1663 f286147f9d20aad1f84495e6f39a254a 254 Gene3D G3DSA:3.40.50.12370 1 252 1.3E-91 T 12-10-2018 Vc3S01_1663 f286147f9d20aad1f84495e6f39a254a 254 PRINTS PR01438 Universal stress protein signature 218 240 8.8E-5 T 12-10-2018 IPR006015 Universal stress protein A Vc3S01_1663 f286147f9d20aad1f84495e6f39a254a 254 PRINTS PR01438 Universal stress protein signature 200 212 8.8E-5 T 12-10-2018 IPR006015 Universal stress protein A Vc3S01_1663 f286147f9d20aad1f84495e6f39a254a 254 SUPERFAMILY SSF52402 2 97 2.26E-16 T 12-10-2018 Vc3S01_1663 f286147f9d20aad1f84495e6f39a254a 254 Pfam PF00582 Universal stress protein family 22 87 1.3E-7 T 12-10-2018 IPR006016 UspA Vc3S01_1663 f286147f9d20aad1f84495e6f39a254a 254 Pfam PF00582 Universal stress protein family 117 240 5.0E-15 T 12-10-2018 IPR006016 UspA Vc3S01_1746 cd294c1833e46b1c4e65d8b6ed41e38e 204 SUPERFAMILY SSF51161 5 195 9.7E-55 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily Vc3S01_1746 cd294c1833e46b1c4e65d8b6ed41e38e 204 Gene3D G3DSA:2.160.10.10 1 201 2.1E-67 T 12-10-2018 Vc3S01_1746 cd294c1833e46b1c4e65d8b6ed41e38e 204 SMART SM01266 4 58 3.4E-15 T 12-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 Vc3S01_1746 cd294c1833e46b1c4e65d8b6ed41e38e 204 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 138 166 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 Vc3S01_1746 cd294c1833e46b1c4e65d8b6ed41e38e 204 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 129 164 6.8E-13 T 12-10-2018 IPR001451 Hexapeptide repeat Vc3S01_1746 cd294c1833e46b1c4e65d8b6ed41e38e 204 Pfam PF12464 Maltose acetyltransferase 10 57 8.8E-11 T 12-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 Vc3S01_3167 ede55ac1b70ffab5dd26088a97396dd8 185 Pfam PF01300 Telomere recombination 9 185 3.1E-50 T 12-10-2018 IPR006070 YrdC-like domain GO:0003725 Vc3S01_3167 ede55ac1b70ffab5dd26088a97396dd8 185 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 4 185 8.3E-41 T 12-10-2018 IPR006070 YrdC-like domain GO:0003725 Vc3S01_3167 ede55ac1b70ffab5dd26088a97396dd8 185 SUPERFAMILY SSF55821 2 182 1.34E-57 T 12-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Vc3S01_3167 ede55ac1b70ffab5dd26088a97396dd8 185 Gene3D G3DSA:3.90.870.10 1 183 7.7E-63 T 12-10-2018 Vc3S01_3167 ede55ac1b70ffab5dd26088a97396dd8 185 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 1 183 41.155 T 12-10-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 Vc3S01_0614 326cbc574d532b14962fe1585df8243a 429 Pfam PF01551 Peptidase family M23 295 389 8.3E-31 T 12-10-2018 IPR016047 Peptidase M23 Vc3S01_0614 326cbc574d532b14962fe1585df8243a 429 SUPERFAMILY SSF51261 144 390 9.42E-71 T 12-10-2018 IPR011055 Duplicated hybrid motif Vc3S01_0614 326cbc574d532b14962fe1585df8243a 429 Gene3D G3DSA:2.70.70.10 266 395 3.6E-80 T 12-10-2018 IPR011055 Duplicated hybrid motif Vc3S01_0614 326cbc574d532b14962fe1585df8243a 429 Pfam PF08525 Opacity-associated protein A N-terminal motif 4 32 2.5E-5 T 12-10-2018 IPR013731 Opacity-associated protein A, N-terminal Vc3S01_0614 326cbc574d532b14962fe1585df8243a 429 Gene3D G3DSA:3.10.450.350 70 158 1.4E-9 T 12-10-2018 Vc3S01_0614 326cbc574d532b14962fe1585df8243a 429 Gene3D G3DSA:3.10.450.350 172 409 3.6E-80 T 12-10-2018 Vc3S01_3053 202c5e326c97c2cbacd032daa2f39e70 381 Pfam PF05134 Type II secretion system (T2SS), protein L 1 218 1.6E-73 T 12-10-2018 IPR024230 GspL, cytoplasmic actin-ATPase-like domain Vc3S01_3053 202c5e326c97c2cbacd032daa2f39e70 381 Gene3D G3DSA:3.30.420.380 1 215 3.0E-78 T 12-10-2018 Vc3S01_3053 202c5e326c97c2cbacd032daa2f39e70 381 Pfam PF12693 GspL periplasmic domain 222 380 9.9E-54 T 12-10-2018 IPR025691 GspL periplasmic domain Vc3S01_3053 202c5e326c97c2cbacd032daa2f39e70 381 SUPERFAMILY SSF53067 1 125 3.88E-34 T 12-10-2018 Vc3S01_3053 202c5e326c97c2cbacd032daa2f39e70 381 Gene3D G3DSA:3.30.1360.100 295 381 8.5E-32 T 12-10-2018 Vc3S01_3053 202c5e326c97c2cbacd032daa2f39e70 381 TIGRFAM TIGR01709 typeII_sec_gspL: type II secretion system protein L 2 379 3.2E-91 T 12-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 Vc3S01_3053 202c5e326c97c2cbacd032daa2f39e70 381 SUPERFAMILY SSF53067 127 216 1.55E-23 T 12-10-2018 Vc3S01_3053 202c5e326c97c2cbacd032daa2f39e70 381 PIRSF PIRSF015761 3 381 3.4E-39 T 12-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 Vc3S01_3053 202c5e326c97c2cbacd032daa2f39e70 381 Gene3D G3DSA:3.30.420.370 123 193 3.0E-78 T 12-10-2018 Vc3S01_A0857 5f2e422ebf1f4e168f9c624bb2311158 357 Pfam PF01734 Patatin-like phospholipase 5 220 5.1E-27 T 12-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 Vc3S01_A0857 5f2e422ebf1f4e168f9c624bb2311158 357 SUPERFAMILY SSF52151 1 313 7.5E-40 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Vc3S01_A0857 5f2e422ebf1f4e168f9c624bb2311158 357 Gene3D G3DSA:3.40.1090.10 163 313 1.1E-10 T 12-10-2018 Vc3S01_A0857 5f2e422ebf1f4e168f9c624bb2311158 357 Gene3D G3DSA:3.40.1090.10 1 112 2.3E-22 T 12-10-2018 Vc3S01_0544 adbb30af967e31c4d52f8c7d9fe89e57 316 SUPERFAMILY SSF51735 122 246 1.59E-28 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_0544 adbb30af967e31c4d52f8c7d9fe89e57 316 SUPERFAMILY SSF50129 4 154 1.83E-35 T 12-10-2018 IPR011032 GroES-like superfamily Vc3S01_0544 adbb30af967e31c4d52f8c7d9fe89e57 316 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 93 8.8E-8 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Vc3S01_0544 adbb30af967e31c4d52f8c7d9fe89e57 316 SMART SM00829 12 312 3.0E-14 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Vc3S01_0544 adbb30af967e31c4d52f8c7d9fe89e57 316 Gene3D G3DSA:3.40.50.720 133 263 2.7E-93 T 12-10-2018 Vc3S01_0544 adbb30af967e31c4d52f8c7d9fe89e57 316 Pfam PF13602 Zinc-binding dehydrogenase 191 312 5.3E-21 T 12-10-2018 Vc3S01_0544 adbb30af967e31c4d52f8c7d9fe89e57 316 Gene3D G3DSA:3.90.180.10 10 310 2.7E-93 T 12-10-2018 Vc3S01_2368 4ffa79f2d3809350d195119ff468f19e 64 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 2 44 2.0E-15 T 12-10-2018 IPR027354 YcgL domain Vc3S01_2368 4ffa79f2d3809350d195119ff468f19e 64 SUPERFAMILY SSF160191 2 62 1.83E-18 T 12-10-2018 IPR038068 YcgL-like superfamily Vc3S01_2368 4ffa79f2d3809350d195119ff468f19e 64 Gene3D G3DSA:3.10.510.20 1 44 1.8E-10 T 12-10-2018 IPR038068 YcgL-like superfamily Vc3S01_2368 4ffa79f2d3809350d195119ff468f19e 64 Pfam PF05166 YcgL domain 2 45 2.6E-12 T 12-10-2018 IPR027354 YcgL domain Vc3S01_2303 d7d87c6c8c056ef17647aa1f91746df9 624 Pfam PF01553 Acyltransferase 442 567 1.4E-23 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Vc3S01_2303 d7d87c6c8c056ef17647aa1f91746df9 624 SUPERFAMILY SSF103473 12 424 3.66E-27 T 12-10-2018 IPR036259 MFS transporter superfamily Vc3S01_2303 d7d87c6c8c056ef17647aa1f91746df9 624 Gene3D G3DSA:1.20.1250.20 9 421 2.0E-26 T 12-10-2018 Vc3S01_2303 d7d87c6c8c056ef17647aa1f91746df9 624 SMART SM00563 456 570 2.6E-36 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Vc3S01_2303 d7d87c6c8c056ef17647aa1f91746df9 624 SUPERFAMILY SSF69593 405 610 1.01E-29 T 12-10-2018 Vc3S01_2303 d7d87c6c8c056ef17647aa1f91746df9 624 Pfam PF07690 Major Facilitator Superfamily 43 316 2.9E-11 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Vc3S01_A1613 21ec86f6fb1cf1543a7b4b77cf825a2b 177 SUPERFAMILY SSF53597 4 175 1.22E-31 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Vc3S01_A1613 21ec86f6fb1cf1543a7b4b77cf825a2b 177 Pfam PF01872 RibD C-terminal domain 4 164 1.1E-18 T 12-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 Vc3S01_A1613 21ec86f6fb1cf1543a7b4b77cf825a2b 177 Gene3D G3DSA:3.40.430.10 2 175 6.0E-51 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Vc3S01_A0219 b6312812749a0cd02b61b94bf4987277 164 Pfam PF10029 Predicted periplasmic protein (DUF2271) 23 155 6.0E-47 T 12-10-2018 IPR014469 Protein of unknown function DUF2271 Vc3S01_A0219 b6312812749a0cd02b61b94bf4987277 164 Gene3D G3DSA:2.60.40.4070 77 134 6.8E-10 T 12-10-2018 Vc3S01_A0219 b6312812749a0cd02b61b94bf4987277 164 PIRSF PIRSF014995 1 164 2.7E-65 T 12-10-2018 IPR014469 Protein of unknown function DUF2271 Vc3S01_A0772 0ed2a31f0e32fd185c7e580e44115805 382 SUPERFAMILY SSF56796 5 381 4.06E-138 T 12-10-2018 Vc3S01_A0772 0ed2a31f0e32fd185c7e580e44115805 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 374 2.4E-128 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 Vc3S01_A0772 0ed2a31f0e32fd185c7e580e44115805 382 Gene3D G3DSA:3.40.50.1970 2 183 3.5E-57 T 12-10-2018 Vc3S01_A0772 0ed2a31f0e32fd185c7e580e44115805 382 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 172 200 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 Vc3S01_A0772 0ed2a31f0e32fd185c7e580e44115805 382 Gene3D G3DSA:1.20.1090.10 184 382 8.6E-80 T 12-10-2018 Vc3S01_A0772 0ed2a31f0e32fd185c7e580e44115805 382 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 259 279 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 Vc3S01_A0726 530e64cce73e59cc2ea393d57463be0a 612 Gene3D G3DSA:3.30.1360.200 288 428 6.4E-47 T 12-10-2018 Vc3S01_A0726 530e64cce73e59cc2ea393d57463be0a 612 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 15 612 43.107 T 12-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 Vc3S01_A0726 530e64cce73e59cc2ea393d57463be0a 612 Pfam PF13721 SecD export protein N-terminal TM region 14 109 6.9E-22 T 12-10-2018 IPR027398 SecD export protein N-terminal TM domain Vc3S01_A0726 530e64cce73e59cc2ea393d57463be0a 612 SUPERFAMILY SSF82866 407 604 2.09E-40 T 12-10-2018 Vc3S01_A0726 530e64cce73e59cc2ea393d57463be0a 612 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 134 598 3.8E-131 T 12-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 Vc3S01_A0726 530e64cce73e59cc2ea393d57463be0a 612 Gene3D G3DSA:3.30.70.3400 230 434 6.4E-47 T 12-10-2018 Vc3S01_A0726 530e64cce73e59cc2ea393d57463be0a 612 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 348 590 3.4E-73 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Vc3S01_A0726 530e64cce73e59cc2ea393d57463be0a 612 Pfam PF07549 SecD/SecF GG Motif 128 150 2.1E-4 T 12-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site Vc3S01_A0726 530e64cce73e59cc2ea393d57463be0a 612 Pfam PF02355 Protein export membrane protein 430 598 1.4E-17 T 12-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial Vc3S01_1270 01582325c58dfbdb0de437924a5a3906 261 SMART SM00421 197 254 6.0E-15 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_1270 01582325c58dfbdb0de437924a5a3906 261 Pfam PF00196 Bacterial regulatory proteins, luxR family 199 254 1.9E-15 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_1270 01582325c58dfbdb0de437924a5a3906 261 SUPERFAMILY SSF46894 192 259 4.08E-17 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Vc3S01_1270 01582325c58dfbdb0de437924a5a3906 261 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 230 242 4.5E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_1270 01582325c58dfbdb0de437924a5a3906 261 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 214 230 4.5E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_1270 01582325c58dfbdb0de437924a5a3906 261 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 200 214 4.5E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_1270 01582325c58dfbdb0de437924a5a3906 261 Gene3D G3DSA:1.10.10.10 188 260 3.2E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_0993 74934ddf56793309aea442cadb745d8b 333 PRINTS PR01021 OMPA domain signature 254 269 4.1E-11 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Vc3S01_0993 74934ddf56793309aea442cadb745d8b 333 PRINTS PR01021 OMPA domain signature 269 285 4.1E-11 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Vc3S01_0993 74934ddf56793309aea442cadb745d8b 333 SUPERFAMILY SSF103088 206 324 2.09E-35 T 12-10-2018 IPR036737 OmpA-like domain superfamily Vc3S01_0993 74934ddf56793309aea442cadb745d8b 333 Gene3D G3DSA:2.40.160.20 16 210 3.4E-41 T 12-10-2018 Vc3S01_0993 74934ddf56793309aea442cadb745d8b 333 SUPERFAMILY SSF56925 29 195 9.94E-32 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel Vc3S01_0993 74934ddf56793309aea442cadb745d8b 333 Pfam PF00691 OmpA family 225 318 1.1E-23 T 12-10-2018 IPR006665 OmpA-like domain Vc3S01_0993 74934ddf56793309aea442cadb745d8b 333 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 287 306 1.8E-6 T 12-10-2018 Vc3S01_0993 74934ddf56793309aea442cadb745d8b 333 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 307 327 1.8E-6 T 12-10-2018 Vc3S01_0993 74934ddf56793309aea442cadb745d8b 333 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 269 286 1.8E-6 T 12-10-2018 Vc3S01_0993 74934ddf56793309aea442cadb745d8b 333 Gene3D G3DSA:3.30.1330.60 211 326 1.4E-37 T 12-10-2018 IPR036737 OmpA-like domain superfamily Vc3S01_0993 74934ddf56793309aea442cadb745d8b 333 Pfam PF01389 OmpA-like transmembrane domain 31 194 2.4E-25 T 12-10-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 Vc3S01_0463 bf1eb778aa1ea39cc80876f5c7a69d21 322 Gene3D G3DSA:1.10.340.30 1 94 2.4E-72 T 12-10-2018 Vc3S01_0463 bf1eb778aa1ea39cc80876f5c7a69d21 322 Gene3D G3DSA:3.90.79.10 187 320 7.7E-17 T 12-10-2018 Vc3S01_0463 bf1eb778aa1ea39cc80876f5c7a69d21 322 SUPERFAMILY SSF48150 1 187 9.89E-63 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Vc3S01_0463 bf1eb778aa1ea39cc80876f5c7a69d21 322 SUPERFAMILY SSF55811 182 317 2.64E-26 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Vc3S01_0463 bf1eb778aa1ea39cc80876f5c7a69d21 322 ProSitePatterns PS01155 Endonuclease III family signature. 64 93 - T 12-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 Vc3S01_0463 bf1eb778aa1ea39cc80876f5c7a69d21 322 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 154 170 - T 12-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 Vc3S01_0463 bf1eb778aa1ea39cc80876f5c7a69d21 322 Gene3D G3DSA:1.10.1670.10 95 173 2.4E-72 T 12-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 Vc3S01_0463 bf1eb778aa1ea39cc80876f5c7a69d21 322 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 1 130 4.5E-20 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Vc3S01_0463 bf1eb778aa1ea39cc80876f5c7a69d21 322 Pfam PF14815 NUDIX domain 206 316 7.5E-22 T 12-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 Vc3S01_0463 bf1eb778aa1ea39cc80876f5c7a69d21 322 SMART SM00478 1 152 3.0E-47 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Vc3S01_0463 bf1eb778aa1ea39cc80876f5c7a69d21 322 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 1 234 8.1E-108 T 12-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 Vc3S01_0463 bf1eb778aa1ea39cc80876f5c7a69d21 322 SMART SM00525 153 173 4.8E-4 T 12-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 Vc3S01_0463 bf1eb778aa1ea39cc80876f5c7a69d21 322 Pfam PF00633 Helix-hairpin-helix motif 61 89 3.8E-6 T 12-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 Vc3S01_0463 bf1eb778aa1ea39cc80876f5c7a69d21 322 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 154 170 4.9E-4 T 12-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 Vc3S01_A1554 e27ad2758dbf4da0075f6891e38f7111 302 Gene3D G3DSA:1.10.10.10 1 88 8.0E-10 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A1554 e27ad2758dbf4da0075f6891e38f7111 302 Pfam PF03466 LysR substrate binding domain 142 289 7.1E-8 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_A1554 e27ad2758dbf4da0075f6891e38f7111 302 Gene3D G3DSA:3.40.190.290 137 297 1.7E-6 T 12-10-2018 Vc3S01_A1554 e27ad2758dbf4da0075f6891e38f7111 302 SUPERFAMILY SSF53850 92 296 3.44E-18 T 12-10-2018 Vc3S01_A1554 e27ad2758dbf4da0075f6891e38f7111 302 SUPERFAMILY SSF46785 4 86 3.99E-8 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_0024 51637fd188446dd7adb357b8fecb9e60 107 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 6 102 5.1E-27 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 Vc3S01_0024 51637fd188446dd7adb357b8fecb9e60 107 Pfam PF00825 Ribonuclease P 1 101 2.2E-31 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 Vc3S01_0024 51637fd188446dd7adb357b8fecb9e60 107 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 5 93 2.0E-45 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 Vc3S01_0024 51637fd188446dd7adb357b8fecb9e60 107 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 1 104 13.149 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 Vc3S01_0024 51637fd188446dd7adb357b8fecb9e60 107 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 45 59 - T 12-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 Vc3S01_0024 51637fd188446dd7adb357b8fecb9e60 107 Gene3D G3DSA:3.30.230.10 1 107 4.0E-38 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Vc3S01_0024 51637fd188446dd7adb357b8fecb9e60 107 SUPERFAMILY SSF54211 1 103 1.06E-28 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Vc3S01_2860 d87cc0c925e11c4ba46a967577f97123 200 SUPERFAMILY SSF52016 1 196 3.53E-60 T 12-10-2018 Vc3S01_2860 d87cc0c925e11c4ba46a967577f97123 200 Gene3D G3DSA:3.20.19.10 1 180 4.5E-77 T 12-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 Vc3S01_2860 d87cc0c925e11c4ba46a967577f97123 200 Pfam PF00694 Aconitase C-terminal domain 1 125 3.1E-39 T 12-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 Vc3S01_2860 d87cc0c925e11c4ba46a967577f97123 200 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 188 6.9E-98 T 12-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 Vc3S01_2860 d87cc0c925e11c4ba46a967577f97123 200 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 199 44.046 T 12-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 Vc3S01_3164 7827332d9745e18cf6b2cf0199ba4dc5 87 Gene3D G3DSA:3.30.160.140 1 87 6.0E-32 T 12-10-2018 IPR036692 Shew3726-like superfamily Vc3S01_3164 7827332d9745e18cf6b2cf0199ba4dc5 87 Pfam PF07369 Protein of unknown function (DUF1488) 5 85 1.8E-24 T 12-10-2018 IPR009962 Protein of unknown function DUF1488 Vc3S01_3164 7827332d9745e18cf6b2cf0199ba4dc5 87 SUPERFAMILY SSF160272 1 86 8.37E-29 T 12-10-2018 IPR036692 Shew3726-like superfamily Vc3S01_2044 2d61085f26ab10490b1147c2dd010eb7 220 Gene3D G3DSA:3.60.21.10 2 213 1.3E-12 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like Vc3S01_2044 2d61085f26ab10490b1147c2dd010eb7 220 SUPERFAMILY SSF56300 6 198 1.36E-24 T 12-10-2018 Vc3S01_2044 2d61085f26ab10490b1147c2dd010eb7 220 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 216 108.744 T 12-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 Vc3S01_2044 2d61085f26ab10490b1147c2dd010eb7 220 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 1 207 7.2E-92 T 12-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 Vc3S01_A1150 e83e6bccb60e8d73f8a506f7e14bd42e 406 Pfam PF01238 Phosphomannose isomerase type I 12 368 1.6E-79 T 12-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Vc3S01_A1150 e83e6bccb60e8d73f8a506f7e14bd42e 406 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 9 397 6.4E-94 T 12-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Vc3S01_A1150 e83e6bccb60e8d73f8a506f7e14bd42e 406 PRINTS PR00714 Phosphomannose isomerase type I signature 236 251 1.3E-66 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Vc3S01_A1150 e83e6bccb60e8d73f8a506f7e14bd42e 406 PRINTS PR00714 Phosphomannose isomerase type I signature 290 309 1.3E-66 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Vc3S01_A1150 e83e6bccb60e8d73f8a506f7e14bd42e 406 PRINTS PR00714 Phosphomannose isomerase type I signature 252 271 1.3E-66 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Vc3S01_A1150 e83e6bccb60e8d73f8a506f7e14bd42e 406 PRINTS PR00714 Phosphomannose isomerase type I signature 94 115 1.3E-66 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Vc3S01_A1150 e83e6bccb60e8d73f8a506f7e14bd42e 406 PRINTS PR00714 Phosphomannose isomerase type I signature 14 32 1.3E-66 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Vc3S01_A1150 e83e6bccb60e8d73f8a506f7e14bd42e 406 PRINTS PR00714 Phosphomannose isomerase type I signature 271 290 1.3E-66 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Vc3S01_A1150 e83e6bccb60e8d73f8a506f7e14bd42e 406 PRINTS PR00714 Phosphomannose isomerase type I signature 139 162 1.3E-66 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Vc3S01_A1150 e83e6bccb60e8d73f8a506f7e14bd42e 406 PRINTS PR00714 Phosphomannose isomerase type I signature 42 57 1.3E-66 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Vc3S01_A1150 e83e6bccb60e8d73f8a506f7e14bd42e 406 ProSitePatterns PS00966 Phosphomannose isomerase type I signature 2. 271 296 - T 12-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Vc3S01_A1150 e83e6bccb60e8d73f8a506f7e14bd42e 406 Gene3D G3DSA:2.60.120.10 317 398 6.2E-128 T 12-10-2018 IPR014710 RmlC-like jelly roll fold Vc3S01_A1150 e83e6bccb60e8d73f8a506f7e14bd42e 406 PIRSF PIRSF001480 8 406 1.2E-98 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Vc3S01_A1150 e83e6bccb60e8d73f8a506f7e14bd42e 406 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 139 147 - T 12-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Vc3S01_A1150 e83e6bccb60e8d73f8a506f7e14bd42e 406 Gene3D G3DSA:1.10.441.10 163 316 6.2E-128 T 12-10-2018 Vc3S01_A1150 e83e6bccb60e8d73f8a506f7e14bd42e 406 Gene3D G3DSA:2.60.120.10 16 291 6.2E-128 T 12-10-2018 IPR014710 RmlC-like jelly roll fold Vc3S01_A1150 e83e6bccb60e8d73f8a506f7e14bd42e 406 SUPERFAMILY SSF51182 9 390 3.67E-98 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily Vc3S01_2058 73988d744ff15e9b7802d3be5db3452c 434 SUPERFAMILY SSF53613 31 417 1.4E-43 T 12-10-2018 IPR029056 Ribokinase-like Vc3S01_2058 73988d744ff15e9b7802d3be5db3452c 434 Pfam PF00294 pfkB family carbohydrate kinase 86 292 3.9E-10 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB Vc3S01_A0521 04c4a650a3bced61742f847092d73730 106 PIRSF PIRSF029143 3 106 8.7E-47 T 12-10-2018 IPR008314 Uncharacterised conserved protein UCP029143 Vc3S01_A0521 04c4a650a3bced61742f847092d73730 106 SMART SM01022 8 106 2.7E-26 T 12-10-2018 IPR007374 ASCH domain Vc3S01_A0521 04c4a650a3bced61742f847092d73730 106 Hamap MF_00684 UPF0267 protein YqfB [yqfB]. 4 105 29.969 T 12-10-2018 IPR008314 Uncharacterised conserved protein UCP029143 Vc3S01_A0521 04c4a650a3bced61742f847092d73730 106 SUPERFAMILY SSF88697 5 105 7.95E-32 T 12-10-2018 IPR015947 PUA-like superfamily Vc3S01_A0521 04c4a650a3bced61742f847092d73730 106 Pfam PF04266 ASCH domain 9 105 1.1E-14 T 12-10-2018 IPR007374 ASCH domain Vc3S01_A0521 04c4a650a3bced61742f847092d73730 106 Gene3D G3DSA:2.30.130.30 3 105 2.2E-44 T 12-10-2018 Vc3S01_A0296 50ab4f691fa18b0a1af180267a688ab2 183 Gene3D G3DSA:2.40.160.20 21 183 7.4E-16 T 12-10-2018 Vc3S01_A0296 50ab4f691fa18b0a1af180267a688ab2 183 Pfam PF13505 Outer membrane protein beta-barrel domain 7 183 1.3E-12 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel Vc3S01_A0296 50ab4f691fa18b0a1af180267a688ab2 183 SUPERFAMILY SSF56925 21 183 3.4E-16 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel Vc3S01_3205 07f25c5dd65b0e9fc890bacdbf93b8b7 467 SUPERFAMILY SSF50615 1 75 2.17E-25 T 12-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Vc3S01_3205 07f25c5dd65b0e9fc890bacdbf93b8b7 467 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 130 349 2.2E-60 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Vc3S01_3205 07f25c5dd65b0e9fc890bacdbf93b8b7 467 Gene3D G3DSA:1.10.1140.10 352 467 5.7E-54 T 12-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Vc3S01_3205 07f25c5dd65b0e9fc890bacdbf93b8b7 467 Gene3D G3DSA:2.40.10.170 2 75 5.5E-30 T 12-10-2018 Vc3S01_3205 07f25c5dd65b0e9fc890bacdbf93b8b7 467 SUPERFAMILY SSF47917 352 466 7.06E-51 T 12-10-2018 Vc3S01_3205 07f25c5dd65b0e9fc890bacdbf93b8b7 467 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 467 3.7E-249 T 12-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 Vc3S01_3205 07f25c5dd65b0e9fc890bacdbf93b8b7 467 SUPERFAMILY SSF52540 77 355 4.41E-85 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_3205 07f25c5dd65b0e9fc890bacdbf93b8b7 467 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 340 349 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Vc3S01_3205 07f25c5dd65b0e9fc890bacdbf93b8b7 467 SMART SM00382 142 334 5.7E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_3205 07f25c5dd65b0e9fc890bacdbf93b8b7 467 Gene3D G3DSA:3.40.50.300 76 351 7.2E-111 T 12-10-2018 Vc3S01_3205 07f25c5dd65b0e9fc890bacdbf93b8b7 467 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 73 1.2E-20 T 12-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Vc3S01_3205 07f25c5dd65b0e9fc890bacdbf93b8b7 467 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 467 56.028 T 12-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 Vc3S01_3021 dcbeb9bbd9ae32fbdf62860338b19a91 279 SUPERFAMILY SSF52540 6 254 2.25E-73 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_3021 dcbeb9bbd9ae32fbdf62860338b19a91 279 Gene3D G3DSA:3.40.50.300 3 279 2.1E-88 T 12-10-2018 Vc3S01_3021 dcbeb9bbd9ae32fbdf62860338b19a91 279 SMART SM00382 40 240 1.1E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_3021 dcbeb9bbd9ae32fbdf62860338b19a91 279 Pfam PF00005 ABC transporter 32 181 2.3E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_3021 dcbeb9bbd9ae32fbdf62860338b19a91 279 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_2550 8c429a9f94e8277d18b0e1f0e38304b0 260 Hamap MF_01192 Flap endonuclease Xni [xni]. 2 255 45.775 T 12-10-2018 IPR022895 Flap endonuclease Xni GO:0048256 Vc3S01_2550 8c429a9f94e8277d18b0e1f0e38304b0 260 SUPERFAMILY SSF88723 4 164 5.89E-39 T 12-10-2018 IPR029060 PIN-like domain superfamily Vc3S01_2550 8c429a9f94e8277d18b0e1f0e38304b0 260 Gene3D G3DSA:1.10.150.20 167 255 5.6E-22 T 12-10-2018 Vc3S01_2550 8c429a9f94e8277d18b0e1f0e38304b0 260 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 165 258 1.2E-23 T 12-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 Vc3S01_2550 8c429a9f94e8277d18b0e1f0e38304b0 260 SMART SM00279 167 202 1.7E-9 T 12-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 Vc3S01_2550 8c429a9f94e8277d18b0e1f0e38304b0 260 SMART SM00475 3 254 1.1E-70 T 12-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 Vc3S01_2550 8c429a9f94e8277d18b0e1f0e38304b0 260 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 161 5.3E-31 T 12-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 Vc3S01_2550 8c429a9f94e8277d18b0e1f0e38304b0 260 Gene3D G3DSA:3.40.50.1010 1 166 2.2E-52 T 12-10-2018 Vc3S01_2550 8c429a9f94e8277d18b0e1f0e38304b0 260 SUPERFAMILY SSF47807 164 258 8.97E-21 T 12-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily Vc3S01_2727 d986661e9c8aa5ad9202cec0292e5b5d 579 SUPERFAMILY SSF64182 45 464 2.88E-119 T 12-10-2018 IPR038763 DHH phosphoesterase superfamily Vc3S01_2727 d986661e9c8aa5ad9202cec0292e5b5d 579 Pfam PF01368 DHH family 71 205 2.6E-9 T 12-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Vc3S01_2727 d986661e9c8aa5ad9202cec0292e5b5d 579 Pfam PF02272 DHHA1 domain 319 451 8.5E-27 T 12-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 Vc3S01_2727 d986661e9c8aa5ad9202cec0292e5b5d 579 Gene3D G3DSA:3.10.310.30 325 456 1.4E-30 T 12-10-2018 Vc3S01_2727 d986661e9c8aa5ad9202cec0292e5b5d 579 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 20 574 1.1E-158 T 12-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 Vc3S01_2727 d986661e9c8aa5ad9202cec0292e5b5d 579 Gene3D G3DSA:3.90.1640.30 45 323 2.3E-89 T 12-10-2018 Vc3S01_0218 7178e7dc6cd0562a8a84eca91d40b59d 459 PIRSF PIRSF006603 6 453 4.6E-132 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Vc3S01_0218 7178e7dc6cd0562a8a84eca91d40b59d 459 Pfam PF01554 MatE 32 191 2.9E-27 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Vc3S01_0218 7178e7dc6cd0562a8a84eca91d40b59d 459 Pfam PF01554 MatE 255 416 2.4E-20 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Vc3S01_0218 7178e7dc6cd0562a8a84eca91d40b59d 459 TIGRFAM TIGR00797 matE: MATE efflux family protein 32 420 4.3E-57 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Vc3S01_p40057 d607316ef01a9c6e9cd448e235f4f268 243 Gene3D G3DSA:3.40.50.300 30 202 5.5E-7 T 12-10-2018 Vc3S01_p40057 d607316ef01a9c6e9cd448e235f4f268 243 SUPERFAMILY SSF52540 5 195 5.64E-7 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A1668 b4b8df15447112b6bedb49596f69ee66 98 Pfam PF07876 Stress responsive A/B Barrel Domain 2 97 3.8E-31 T 12-10-2018 IPR013097 Stress responsive alpha-beta barrel Vc3S01_A1668 b4b8df15447112b6bedb49596f69ee66 98 Gene3D G3DSA:3.30.70.100 1 98 2.0E-35 T 12-10-2018 Vc3S01_A1668 b4b8df15447112b6bedb49596f69ee66 98 SUPERFAMILY SSF54909 2 97 7.8E-31 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel Vc3S01_A1668 b4b8df15447112b6bedb49596f69ee66 98 SMART SM00886 2 98 2.4E-33 T 12-10-2018 IPR013097 Stress responsive alpha-beta barrel Vc3S01_A1171 c5c5cd7bfbb93527f5246d46cfa6e916 162 Pfam PF01936 NYN domain 8 156 4.1E-38 T 12-10-2018 IPR021139 NYN domain, limkain-b1-type Vc3S01_A1171 c5c5cd7bfbb93527f5246d46cfa6e916 162 Gene3D G3DSA:3.40.50.1010 1 162 2.4E-61 T 12-10-2018 Vc3S01_3117 153c4e89778f2c3457e81eb0e22d25df 279 Gene3D G3DSA:3.40.50.150 1 279 4.4E-114 T 12-10-2018 Vc3S01_3117 153c4e89778f2c3457e81eb0e22d25df 279 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 277 3.0E-115 T 12-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 Vc3S01_3117 153c4e89778f2c3457e81eb0e22d25df 279 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 266 41.1 T 12-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 Vc3S01_3117 153c4e89778f2c3457e81eb0e22d25df 279 SUPERFAMILY SSF53335 9 273 1.4E-95 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Vc3S01_A1800 59f9dc91e0176c6a7af8d6d755641904 224 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 4 219 1.8E-43 T 12-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 Vc3S01_A1800 59f9dc91e0176c6a7af8d6d755641904 224 SUPERFAMILY SSF51569 3 216 6.07E-61 T 12-10-2018 Vc3S01_A1800 59f9dc91e0176c6a7af8d6d755641904 224 Gene3D G3DSA:3.20.20.70 1 220 3.9E-75 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_A1800 59f9dc91e0176c6a7af8d6d755641904 224 ProSitePatterns PS01054 Transaldolase signature 1. 25 33 - T 12-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 Vc3S01_1990 dbf0fc90726ab90639b62aef8485b1cf 598 Gene3D G3DSA:1.10.1060.10 8 115 7.0E-26 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Vc3S01_1990 dbf0fc90726ab90639b62aef8485b1cf 598 SUPERFAMILY SSF46548 16 129 5.75E-22 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Vc3S01_1990 dbf0fc90726ab90639b62aef8485b1cf 598 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 533 544 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Vc3S01_1990 dbf0fc90726ab90639b62aef8485b1cf 598 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 20 106 3.0E-18 T 12-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 Vc3S01_1990 dbf0fc90726ab90639b62aef8485b1cf 598 Gene3D G3DSA:3.50.50.60 225 359 7.7E-39 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_1990 dbf0fc90726ab90639b62aef8485b1cf 598 SUPERFAMILY SSF46548 415 552 3.79E-16 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Vc3S01_1990 dbf0fc90726ab90639b62aef8485b1cf 598 Gene3D G3DSA:3.50.50.60 116 224 2.4E-17 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_1990 dbf0fc90726ab90639b62aef8485b1cf 598 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 120 401 5.1E-27 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Vc3S01_1990 dbf0fc90726ab90639b62aef8485b1cf 598 Pfam PF13534 4Fe-4S dicluster domain 489 547 1.3E-4 T 12-10-2018 Vc3S01_1990 dbf0fc90726ab90639b62aef8485b1cf 598 PRINTS PR00419 Adrenodoxin reductase family signature 185 195 9.6E-23 T 12-10-2018 Vc3S01_1990 dbf0fc90726ab90639b62aef8485b1cf 598 PRINTS PR00419 Adrenodoxin reductase family signature 252 266 9.6E-23 T 12-10-2018 Vc3S01_1990 dbf0fc90726ab90639b62aef8485b1cf 598 PRINTS PR00419 Adrenodoxin reductase family signature 143 156 9.6E-23 T 12-10-2018 Vc3S01_1990 dbf0fc90726ab90639b62aef8485b1cf 598 PRINTS PR00419 Adrenodoxin reductase family signature 120 142 9.6E-23 T 12-10-2018 Vc3S01_1990 dbf0fc90726ab90639b62aef8485b1cf 598 PRINTS PR00419 Adrenodoxin reductase family signature 286 299 9.6E-23 T 12-10-2018 Vc3S01_1990 dbf0fc90726ab90639b62aef8485b1cf 598 SUPERFAMILY SSF51971 117 360 3.77E-62 T 12-10-2018 Vc3S01_A1312 7d09ce17baae602781b83a82bc1339a3 328 Pfam PF01551 Peptidase family M23 198 291 5.3E-30 T 12-10-2018 IPR016047 Peptidase M23 Vc3S01_A1312 7d09ce17baae602781b83a82bc1339a3 328 Gene3D G3DSA:2.70.70.10 169 296 3.0E-42 T 12-10-2018 IPR011055 Duplicated hybrid motif Vc3S01_A1312 7d09ce17baae602781b83a82bc1339a3 328 SUPERFAMILY SSF51261 68 296 6.28E-55 T 12-10-2018 IPR011055 Duplicated hybrid motif Vc3S01_A1312 7d09ce17baae602781b83a82bc1339a3 328 Gene3D G3DSA:3.10.450.350 69 166 1.2E-11 T 12-10-2018 Vc3S01_2708 42a6750a022955580f77cac29224bdfd 942 SUPERFAMILY SSF50677 203 408 1.67E-54 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Vc3S01_2708 42a6750a022955580f77cac29224bdfd 942 Gene3D G3DSA:3.40.50.620 25 634 5.4E-242 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Vc3S01_2708 42a6750a022955580f77cac29224bdfd 942 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 933 21.51 T 12-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 Vc3S01_2708 42a6750a022955580f77cac29224bdfd 942 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 645 3.2E-219 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Vc3S01_2708 42a6750a022955580f77cac29224bdfd 942 Pfam PF06827 Zinc finger found in FPG and IleRS 902 930 6.0E-7 T 12-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 Vc3S01_2708 42a6750a022955580f77cac29224bdfd 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 5.1E-32 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Vc3S01_2708 42a6750a022955580f77cac29224bdfd 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 241 264 5.1E-32 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Vc3S01_2708 42a6750a022955580f77cac29224bdfd 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 406 421 5.1E-32 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Vc3S01_2708 42a6750a022955580f77cac29224bdfd 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 531 544 5.1E-32 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Vc3S01_2708 42a6750a022955580f77cac29224bdfd 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 566 575 5.1E-32 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Vc3S01_2708 42a6750a022955580f77cac29224bdfd 942 SUPERFAMILY SSF47323 657 933 1.57E-74 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Vc3S01_2708 42a6750a022955580f77cac29224bdfd 942 Gene3D G3DSA:1.10.730.20 645 934 3.2E-87 T 12-10-2018 Vc3S01_2708 42a6750a022955580f77cac29224bdfd 942 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Vc3S01_2708 42a6750a022955580f77cac29224bdfd 942 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 848 4.7E-295 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Vc3S01_2708 42a6750a022955580f77cac29224bdfd 942 SUPERFAMILY SSF52374 4 652 3.34E-139 T 12-10-2018 Vc3S01_2708 42a6750a022955580f77cac29224bdfd 942 Pfam PF08264 Anticodon-binding domain of tRNA 690 846 2.8E-26 T 12-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 Vc3S01_2708 42a6750a022955580f77cac29224bdfd 942 Gene3D G3DSA:3.90.740.10 195 413 5.4E-242 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Vc3S01_1261 408e4e117a72284cbb10a34b6437e429 122 Pfam PF13487 HD domain 6 75 4.1E-15 T 12-10-2018 Vc3S01_1261 408e4e117a72284cbb10a34b6437e429 122 Gene3D G3DSA:1.10.3210.10 1 122 9.2E-46 T 12-10-2018 Vc3S01_1261 408e4e117a72284cbb10a34b6437e429 122 SUPERFAMILY SSF109604 2 121 6.63E-19 T 12-10-2018 Vc3S01_A0208 94970e08f615114b99a5569b91c92558 221 Gene3D G3DSA:1.10.10.10 120 220 9.7E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A0208 94970e08f615114b99a5569b91c92558 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 142 214 1.6E-17 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Vc3S01_A0208 94970e08f615114b99a5569b91c92558 221 SMART SM00862 139 215 5.1E-14 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Vc3S01_A0208 94970e08f615114b99a5569b91c92558 221 Gene3D G3DSA:3.40.50.2300 1 119 9.6E-35 T 12-10-2018 Vc3S01_A0208 94970e08f615114b99a5569b91c92558 221 SUPERFAMILY SSF46894 141 215 6.24E-18 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Vc3S01_A0208 94970e08f615114b99a5569b91c92558 221 Pfam PF00072 Response regulator receiver domain 4 112 8.1E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A0208 94970e08f615114b99a5569b91c92558 221 SUPERFAMILY SSF52172 2 130 8.11E-39 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_A0208 94970e08f615114b99a5569b91c92558 221 SMART SM00448 2 112 7.4E-38 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_3207 be1262cc8ae2a97c89dd5e8f56690657 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 92 5.5E-14 T 12-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Vc3S01_3207 be1262cc8ae2a97c89dd5e8f56690657 513 SUPERFAMILY SSF47917 383 511 2.51E-45 T 12-10-2018 Vc3S01_3207 be1262cc8ae2a97c89dd5e8f56690657 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 512 1.0E-250 T 12-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_3207 be1262cc8ae2a97c89dd5e8f56690657 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 49.596 T 12-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_3207 be1262cc8ae2a97c89dd5e8f56690657 513 Gene3D G3DSA:3.40.50.300 94 382 1.4E-129 T 12-10-2018 Vc3S01_3207 be1262cc8ae2a97c89dd5e8f56690657 513 SUPERFAMILY SSF50615 10 94 5.1E-26 T 12-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Vc3S01_3207 be1262cc8ae2a97c89dd5e8f56690657 513 Gene3D G3DSA:2.40.30.20 1 93 5.3E-30 T 12-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Vc3S01_3207 be1262cc8ae2a97c89dd5e8f56690657 513 Gene3D G3DSA:1.20.150.20 383 513 1.7E-47 T 12-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_3207 be1262cc8ae2a97c89dd5e8f56690657 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Vc3S01_3207 be1262cc8ae2a97c89dd5e8f56690657 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 6.7E-44 T 12-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_3207 be1262cc8ae2a97c89dd5e8f56690657 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 5.3E-71 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Vc3S01_3207 be1262cc8ae2a97c89dd5e8f56690657 513 SUPERFAMILY SSF52540 96 381 9.3E-94 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_1500 d1bf3cc6764bb40509e1ac74faa736f9 421 Pfam PF00202 Aminotransferase class-III 17 406 1.3E-78 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Vc3S01_1500 d1bf3cc6764bb40509e1ac74faa736f9 421 SUPERFAMILY SSF53383 7 409 3.48E-104 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Vc3S01_1500 d1bf3cc6764bb40509e1ac74faa736f9 421 TIGRFAM TIGR02407 ectoine_ectB: diaminobutyrate--2-oxoglutarate aminotransferase 2 410 2.1E-203 T 12-10-2018 IPR012773 Ectoine biosynthetic protein GO:0019491|GO:0030170|GO:0047307 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 Vc3S01_1500 d1bf3cc6764bb40509e1ac74faa736f9 421 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 2 412 9.8E-147 T 12-10-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 Vc3S01_1500 d1bf3cc6764bb40509e1ac74faa736f9 421 PIRSF PIRSF000521 120 154 3.6 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Vc3S01_1500 d1bf3cc6764bb40509e1ac74faa736f9 421 PIRSF PIRSF000521 2 126 0.003 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Vc3S01_1500 d1bf3cc6764bb40509e1ac74faa736f9 421 PIRSF PIRSF000521 175 412 1.3E-30 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Vc3S01_1500 d1bf3cc6764bb40509e1ac74faa736f9 421 Gene3D G3DSA:3.90.1150.10 5 405 1.2E-107 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Vc3S01_1500 d1bf3cc6764bb40509e1ac74faa736f9 421 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 230 266 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Vc3S01_1500 d1bf3cc6764bb40509e1ac74faa736f9 421 Gene3D G3DSA:3.40.640.10 54 313 1.2E-107 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Vc3S01_1409 1950befe970b55d14dc063da7ad29845 403 SUPERFAMILY SSF109604 156 327 4.11E-32 T 12-10-2018 Vc3S01_1409 1950befe970b55d14dc063da7ad29845 403 SMART SM00471 161 297 5.0E-9 T 12-10-2018 IPR003607 HD/PDEase domain Vc3S01_1409 1950befe970b55d14dc063da7ad29845 403 Pfam PF11871 Domain of unknown function (DUF3391) 9 133 3.6E-18 T 12-10-2018 IPR021812 Protein of unknown function DUF3391 Vc3S01_1409 1950befe970b55d14dc063da7ad29845 403 Pfam PF01966 HD domain 166 290 1.6E-13 T 12-10-2018 IPR006674 HD domain Vc3S01_1409 1950befe970b55d14dc063da7ad29845 403 Gene3D G3DSA:1.10.3210.10 13 328 2.2E-70 T 12-10-2018 Vc3S01_2682 ea004ce9818320693d483b8573fa6f0b 215 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 2 213 6.8E-61 T 12-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase Vc3S01_2682 ea004ce9818320693d483b8573fa6f0b 215 SUPERFAMILY SSF64438 2 214 2.38E-75 T 12-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic Vc3S01_2682 ea004ce9818320693d483b8573fa6f0b 215 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 2 212 4.2E-68 T 12-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase Vc3S01_2682 ea004ce9818320693d483b8573fa6f0b 215 Gene3D G3DSA:3.60.140.10 1 213 2.8E-77 T 12-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily Vc3S01_A1446 fd435b5b1ee6ca4f49c9c0cb2282c4c9 302 Pfam PF00248 Aldo/keto reductase family 17 291 1.2E-58 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain Vc3S01_A1446 fd435b5b1ee6ca4f49c9c0cb2282c4c9 302 SUPERFAMILY SSF51430 6 293 3.93E-69 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Vc3S01_A1446 fd435b5b1ee6ca4f49c9c0cb2282c4c9 302 Gene3D G3DSA:3.20.20.100 1 302 1.3E-98 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Vc3S01_A0252 a290962983c82665f940ebf349476829 414 Pfam PF03116 NQR2, RnfD, RnfE family 43 404 9.6E-106 T 12-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 Vc3S01_A0252 a290962983c82665f940ebf349476829 414 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 3 407 1.9E-178 T 12-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 Vc3S01_A0252 a290962983c82665f940ebf349476829 414 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 411 35.568 T 12-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 Vc3S01_A0252 a290962983c82665f940ebf349476829 414 PIRSF PIRSF016055 1 412 1.9E-187 T 12-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 Vc3S01_0536 2c2cf558654c45cf11e0819ed8182e8d 155 Hamap MF_01114 Regulatory protein RecX [recX]. 7 155 13.827 T 12-10-2018 IPR003783 Regulatory protein RecX GO:0006282 Vc3S01_0536 2c2cf558654c45cf11e0819ed8182e8d 155 Gene3D G3DSA:1.10.10.10 104 151 1.3E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_0536 2c2cf558654c45cf11e0819ed8182e8d 155 Gene3D G3DSA:1.10.10.10 11 50 1.4E-9 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_0536 2c2cf558654c45cf11e0819ed8182e8d 155 Pfam PF02631 RecX family 34 150 3.7E-30 T 12-10-2018 IPR003783 Regulatory protein RecX GO:0006282 Vc3S01_0536 2c2cf558654c45cf11e0819ed8182e8d 155 Gene3D G3DSA:1.10.10.10 58 101 1.2E-14 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A1887 929aeaf4819015d1f83c3817c6e915c8 222 Gene3D G3DSA:3.40.1080.10 6 222 2.0E-76 T 12-10-2018 Vc3S01_A1887 929aeaf4819015d1f83c3817c6e915c8 222 SMART SM00882 9 220 9.7E-68 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 Vc3S01_A1887 929aeaf4819015d1f83c3817c6e915c8 222 SUPERFAMILY SSF100950 7 219 1.26E-75 T 12-10-2018 IPR037171 NagB/RpiA transferase-like Vc3S01_A1887 929aeaf4819015d1f83c3817c6e915c8 222 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 7 218 3.3E-67 T 12-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 Vc3S01_A1887 929aeaf4819015d1f83c3817c6e915c8 222 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 21 36 - T 12-10-2018 IPR004163 Coenzyme A transferase binding site GO:0008410 Reactome: R-HSA-77108 Vc3S01_A1887 929aeaf4819015d1f83c3817c6e915c8 222 Pfam PF01144 Coenzyme A transferase 12 219 2.2E-66 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 Vc3S01_A0293 9e6fc68bfeb41258d5741a328ee6301f 574 Gene3D G3DSA:1.10.3720.10 28 291 1.1E-48 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_A0293 9e6fc68bfeb41258d5741a328ee6301f 574 Gene3D G3DSA:1.10.3720.10 310 564 1.9E-29 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_A0293 9e6fc68bfeb41258d5741a328ee6301f 574 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 287 2.5E-10 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Vc3S01_A0293 9e6fc68bfeb41258d5741a328ee6301f 574 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 393 558 1.3E-8 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Vc3S01_A0293 9e6fc68bfeb41258d5741a328ee6301f 574 SUPERFAMILY SSF161098 308 558 9.03E-33 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_A0293 9e6fc68bfeb41258d5741a328ee6301f 574 TIGRFAM TIGR03262 PhnU2: putative 2-aminoethylphosphonate ABC transporter, permease protein 32 574 6.0E-257 T 12-10-2018 IPR017664 2-aminoethylphosphonate ABC transport system, permease protein, putative Vc3S01_A0293 9e6fc68bfeb41258d5741a328ee6301f 574 SUPERFAMILY SSF161098 31 284 1.31E-42 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_A0510 90a3bfe77022af202dde208d7aefb260 289 Pfam PF12833 Helix-turn-helix domain 209 287 3.1E-19 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_A0510 90a3bfe77022af202dde208d7aefb260 289 SUPERFAMILY SSF46689 239 288 4.93E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_A0510 90a3bfe77022af202dde208d7aefb260 289 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 240 282 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Vc3S01_A0510 90a3bfe77022af202dde208d7aefb260 289 SUPERFAMILY SSF46689 190 236 3.94E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_A0510 90a3bfe77022af202dde208d7aefb260 289 Gene3D G3DSA:1.10.10.60 186 236 5.1E-13 T 12-10-2018 Vc3S01_A0510 90a3bfe77022af202dde208d7aefb260 289 Gene3D G3DSA:1.10.10.60 237 289 8.0E-17 T 12-10-2018 Vc3S01_A0510 90a3bfe77022af202dde208d7aefb260 289 SMART SM00342 203 286 1.5E-30 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_A0510 90a3bfe77022af202dde208d7aefb260 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 270 286 3.3E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Vc3S01_A0510 90a3bfe77022af202dde208d7aefb260 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 255 270 3.3E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Vc3S01_A0510 90a3bfe77022af202dde208d7aefb260 289 SUPERFAMILY SSF51182 35 87 4.19E-5 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily Vc3S01_A1266 cf6d1f8e15716ed0e5082d959e708427 177 Gene3D G3DSA:3.30.700.10 7 111 1.2E-12 T 12-10-2018 Vc3S01_A1266 cf6d1f8e15716ed0e5082d959e708427 177 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Vc3S01_A1266 cf6d1f8e15716ed0e5082d959e708427 177 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 26 3.5E-8 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Vc3S01_A1266 cf6d1f8e15716ed0e5082d959e708427 177 SUPERFAMILY SSF54523 7 89 6.91E-14 T 12-10-2018 Vc3S01_A1266 cf6d1f8e15716ed0e5082d959e708427 177 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 4.1E-9 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Vc3S01_2133 2a5f3d26d8c638568870ffc87ee38292 399 Pfam PF04888 Secretion system effector C (SseC) like family 116 394 1.8E-47 T 12-10-2018 IPR006972 Secretion system effector C, SseC-like GO:0009405 Vc3S01_2412 8f0908c64a62aea7f4c4cb983e2cf211 197 Gene3D G3DSA:3.30.700.10 9 195 8.3E-14 T 12-10-2018 Vc3S01_2412 8f0908c64a62aea7f4c4cb983e2cf211 197 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 28 7.4E-10 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Vc3S01_2412 8f0908c64a62aea7f4c4cb983e2cf211 197 SUPERFAMILY SSF54523 9 145 6.2E-14 T 12-10-2018 Vc3S01_2412 8f0908c64a62aea7f4c4cb983e2cf211 197 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 29 9.5E-8 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Vc3S01_A0483 2e1f39556f59d612146fac949db14392 464 SMART SM00387 351 463 6.9E-27 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_A0483 2e1f39556f59d612146fac949db14392 464 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 351 461 6.5E-17 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_A0483 2e1f39556f59d612146fac949db14392 464 Gene3D G3DSA:1.10.287.130 232 311 2.9E-15 T 12-10-2018 Vc3S01_A0483 2e1f39556f59d612146fac949db14392 464 Gene3D G3DSA:3.30.565.10 312 463 2.3E-31 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_A0483 2e1f39556f59d612146fac949db14392 464 SUPERFAMILY SSF47384 234 308 2.16E-11 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Vc3S01_A0483 2e1f39556f59d612146fac949db14392 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 437 2.3E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_A0483 2e1f39556f59d612146fac949db14392 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 447 460 2.3E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_A0483 2e1f39556f59d612146fac949db14392 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 402 2.3E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_A0483 2e1f39556f59d612146fac949db14392 464 SUPERFAMILY SSF55874 311 461 8.64E-31 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_A0483 2e1f39556f59d612146fac949db14392 464 SMART SM00388 246 312 2.8E-8 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_A0483 2e1f39556f59d612146fac949db14392 464 Pfam PF00512 His Kinase A (phospho-acceptor) domain 247 307 1.8E-9 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_0672 48edec74211616f9618b748ace82247b 251 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 113 216 4.1E-29 T 12-10-2018 IPR031571 Flp pilus assembly protein RcpC/CpaB domain Vc3S01_0672 48edec74211616f9618b748ace82247b 251 SMART SM00858 44 106 5.1E-6 T 12-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 Vc3S01_0672 48edec74211616f9618b748ace82247b 251 TIGRFAM TIGR03177 pilus_cpaB: Flp pilus assembly protein CpaB 8 245 1.4E-71 T 12-10-2018 IPR017592 Pilus assembly, Flp-type CpaB Vc3S01_0672 48edec74211616f9618b748ace82247b 251 Pfam PF08666 SAF domain 45 105 2.7E-7 T 12-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 Vc3S01_0237 7699aebe57e1b30a9b426969465858d0 345 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 192 329 1.5E-52 T 12-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Vc3S01_0237 7699aebe57e1b30a9b426969465858d0 345 PIRSF PIRSF000114 10 344 3.1E-95 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Vc3S01_0237 7699aebe57e1b30a9b426969465858d0 345 Gene3D G3DSA:1.10.1040.10 201 345 8.2E-54 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Vc3S01_0237 7699aebe57e1b30a9b426969465858d0 345 SUPERFAMILY SSF48179 191 343 2.27E-56 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Vc3S01_0237 7699aebe57e1b30a9b426969465858d0 345 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 200 221 - T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Vc3S01_0237 7699aebe57e1b30a9b426969465858d0 345 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 14 334 37.038 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Vc3S01_0237 7699aebe57e1b30a9b426969465858d0 345 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 16 170 4.9E-45 T 12-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Vc3S01_0237 7699aebe57e1b30a9b426969465858d0 345 SUPERFAMILY SSF51735 16 190 4.93E-49 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_0237 7699aebe57e1b30a9b426969465858d0 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 68 95 7.3E-43 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Vc3S01_0237 7699aebe57e1b30a9b426969465858d0 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 18 35 7.3E-43 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Vc3S01_0237 7699aebe57e1b30a9b426969465858d0 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 250 267 7.3E-43 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Vc3S01_0237 7699aebe57e1b30a9b426969465858d0 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 144 164 7.3E-43 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Vc3S01_0237 7699aebe57e1b30a9b426969465858d0 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 185 209 7.3E-43 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Vc3S01_0237 7699aebe57e1b30a9b426969465858d0 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 210 234 7.3E-43 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Vc3S01_0237 7699aebe57e1b30a9b426969465858d0 345 Gene3D G3DSA:3.40.50.720 2 199 6.3E-51 T 12-10-2018 Vc3S01_A1907 2d33e358cd796fe7fd0b064052687afe 342 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 229 240 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Vc3S01_A1907 2d33e358cd796fe7fd0b064052687afe 342 TIGRFAM TIGR02910 sulfite_red_A: sulfite reductase, subunit A 5 341 4.8E-143 T 12-10-2018 IPR014259 Sulphite reductase, subunit A Vc3S01_A1907 2d33e358cd796fe7fd0b064052687afe 342 SUPERFAMILY SSF46548 209 339 2.96E-16 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Vc3S01_A1907 2d33e358cd796fe7fd0b064052687afe 342 Gene3D G3DSA:1.10.1060.10 288 339 2.4E-5 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Vc3S01_A1907 2d33e358cd796fe7fd0b064052687afe 342 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 311 322 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Vc3S01_A1907 2d33e358cd796fe7fd0b064052687afe 342 Pfam PF17179 4Fe-4S dicluster domain 228 325 4.0E-30 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Vc3S01_A1882 96097368fd43116a476d53ebd595c4f1 480 Gene3D G3DSA:1.20.1250.20 10 463 5.4E-130 T 12-10-2018 Vc3S01_A1882 96097368fd43116a476d53ebd595c4f1 480 SUPERFAMILY SSF103473 10 461 1.09E-73 T 12-10-2018 IPR036259 MFS transporter superfamily Vc3S01_A1882 96097368fd43116a476d53ebd595c4f1 480 ProSitePatterns PS00217 Sugar transport proteins signature 2. 116 141 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Vc3S01_A1882 96097368fd43116a476d53ebd595c4f1 480 Pfam PF00083 Sugar (and other) transporter 21 462 4.9E-107 T 12-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 Vc3S01_A1882 96097368fd43116a476d53ebd595c4f1 480 PRINTS PR00171 Sugar transporter signature 111 130 6.7E-23 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 Vc3S01_A1882 96097368fd43116a476d53ebd595c4f1 480 PRINTS PR00171 Sugar transporter signature 358 379 6.7E-23 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 Vc3S01_A1882 96097368fd43116a476d53ebd595c4f1 480 PRINTS PR00171 Sugar transporter signature 273 283 6.7E-23 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 Vc3S01_A1882 96097368fd43116a476d53ebd595c4f1 480 PRINTS PR00171 Sugar transporter signature 381 393 6.7E-23 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 Vc3S01_A1882 96097368fd43116a476d53ebd595c4f1 480 PRINTS PR00171 Sugar transporter signature 28 38 6.7E-23 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 Vc3S01_A1882 96097368fd43116a476d53ebd595c4f1 480 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 11 458 2.4E-113 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 Vc3S01_0836 9221207944dde4bb091ffe20cee66700 162 Pfam PF11143 Protein of unknown function (DUF2919) 3 147 4.9E-55 T 12-10-2018 IPR021318 Protein of unknown function DUF2919 Vc3S01_A0879 4281c42da5605128067058a0f6f9ec13 374 Gene3D G3DSA:3.90.226.10 5 374 1.7E-114 T 12-10-2018 Vc3S01_A0879 4281c42da5605128067058a0f6f9ec13 374 Pfam PF16113 Enoyl-CoA hydratase/isomerase 19 358 4.0E-106 T 12-10-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 Vc3S01_A0879 4281c42da5605128067058a0f6f9ec13 374 SUPERFAMILY SSF52096 18 344 3.17E-53 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Vc3S01_2324 3c419f073e7ff78b66c9a24a2284abeb 208 PRINTS PR00127 Clp protease catalytic subunit P signature 32 47 3.5E-54 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Vc3S01_2324 3c419f073e7ff78b66c9a24a2284abeb 208 PRINTS PR00127 Clp protease catalytic subunit P signature 103 120 3.5E-54 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Vc3S01_2324 3c419f073e7ff78b66c9a24a2284abeb 208 PRINTS PR00127 Clp protease catalytic subunit P signature 72 92 3.5E-54 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Vc3S01_2324 3c419f073e7ff78b66c9a24a2284abeb 208 PRINTS PR00127 Clp protease catalytic subunit P signature 124 143 3.5E-54 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Vc3S01_2324 3c419f073e7ff78b66c9a24a2284abeb 208 PRINTS PR00127 Clp protease catalytic subunit P signature 181 200 3.5E-54 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Vc3S01_2324 3c419f073e7ff78b66c9a24a2284abeb 208 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 103 114 - T 12-10-2018 IPR018215 ClpP, Ser active site Vc3S01_2324 3c419f073e7ff78b66c9a24a2284abeb 208 SUPERFAMILY SSF52096 23 206 1.24E-75 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Vc3S01_2324 3c419f073e7ff78b66c9a24a2284abeb 208 Pfam PF00574 Clp protease 25 205 1.3E-89 T 12-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA Vc3S01_2324 3c419f073e7ff78b66c9a24a2284abeb 208 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 125 138 - T 12-10-2018 IPR033135 ClpP, histidine active site Vc3S01_2324 3c419f073e7ff78b66c9a24a2284abeb 208 Gene3D G3DSA:3.90.226.10 5 207 7.2E-85 T 12-10-2018 Vc3S01_2324 3c419f073e7ff78b66c9a24a2284abeb 208 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 16 206 44.43 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Vc3S01_2324 3c419f073e7ff78b66c9a24a2284abeb 208 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 15 205 5.6E-107 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Vc3S01_0154 1e8ba495f4d572b3dd841e5d97c31c28 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 393 1.3E-230 T 12-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Vc3S01_0154 1e8ba495f4d572b3dd841e5d97c31c28 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 2.4E-33 T 12-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal Vc3S01_0154 1e8ba495f4d572b3dd841e5d97c31c28 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 3.4E-16 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Vc3S01_0154 1e8ba495f4d572b3dd841e5d97c31c28 394 SUPERFAMILY SSF50447 205 301 1.47E-29 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Vc3S01_0154 1e8ba495f4d572b3dd841e5d97c31c28 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site Vc3S01_0154 1e8ba495f4d572b3dd841e5d97c31c28 394 SUPERFAMILY SSF50465 302 394 1.99E-35 T 12-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Vc3S01_0154 1e8ba495f4d572b3dd841e5d97c31c28 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 6.2E-14 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Vc3S01_0154 1e8ba495f4d572b3dd841e5d97c31c28 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 59.449 T 12-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Vc3S01_0154 1e8ba495f4d572b3dd841e5d97c31c28 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 6.8E-58 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Vc3S01_0154 1e8ba495f4d572b3dd841e5d97c31c28 394 Gene3D G3DSA:3.40.50.300 1 203 3.3E-69 T 12-10-2018 Vc3S01_0154 1e8ba495f4d572b3dd841e5d97c31c28 394 Gene3D G3DSA:2.40.30.10 338 393 4.9E-29 T 12-10-2018 Vc3S01_0154 1e8ba495f4d572b3dd841e5d97c31c28 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.7E-23 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Vc3S01_0154 1e8ba495f4d572b3dd841e5d97c31c28 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.7E-23 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Vc3S01_0154 1e8ba495f4d572b3dd841e5d97c31c28 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.7E-23 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Vc3S01_0154 1e8ba495f4d572b3dd841e5d97c31c28 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.7E-23 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Vc3S01_0154 1e8ba495f4d572b3dd841e5d97c31c28 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.7E-23 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Vc3S01_0154 1e8ba495f4d572b3dd841e5d97c31c28 394 Gene3D G3DSA:2.40.30.10 206 334 9.7E-52 T 12-10-2018 Vc3S01_0154 1e8ba495f4d572b3dd841e5d97c31c28 394 SUPERFAMILY SSF52540 6 219 4.98E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_1608 22c9b053979813bcaaa3ae34a14071e3 2176 SUPERFAMILY SSF141072 555 682 1.15E-11 T 12-10-2018 IPR038081 CalX-like domain superfamily Vc3S01_1608 22c9b053979813bcaaa3ae34a14071e3 2176 Gene3D G3DSA:2.150.10.10 2029 2170 9.4E-15 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal Vc3S01_1608 22c9b053979813bcaaa3ae34a14071e3 2176 Gene3D G3DSA:2.60.40.2030 1604 1720 2.4E-6 T 12-10-2018 IPR038081 CalX-like domain superfamily Vc3S01_1608 22c9b053979813bcaaa3ae34a14071e3 2176 Gene3D G3DSA:2.60.40.2030 1067 1184 3.8E-6 T 12-10-2018 IPR038081 CalX-like domain superfamily Vc3S01_1608 22c9b053979813bcaaa3ae34a14071e3 2176 Gene3D G3DSA:2.60.40.2030 283 406 1.6E-9 T 12-10-2018 IPR038081 CalX-like domain superfamily Vc3S01_1608 22c9b053979813bcaaa3ae34a14071e3 2176 Gene3D G3DSA:2.60.40.2030 149 270 4.2E-5 T 12-10-2018 IPR038081 CalX-like domain superfamily Vc3S01_1608 22c9b053979813bcaaa3ae34a14071e3 2176 SUPERFAMILY SSF141072 1064 1183 6.54E-12 T 12-10-2018 IPR038081 CalX-like domain superfamily Vc3S01_1608 22c9b053979813bcaaa3ae34a14071e3 2176 SUPERFAMILY SSF141072 426 553 9.94E-11 T 12-10-2018 IPR038081 CalX-like domain superfamily Vc3S01_1608 22c9b053979813bcaaa3ae34a14071e3 2176 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2055 2073 - T 12-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site Vc3S01_1608 22c9b053979813bcaaa3ae34a14071e3 2176 SUPERFAMILY SSF141072 283 405 1.57E-16 T 12-10-2018 IPR038081 CalX-like domain superfamily Vc3S01_1608 22c9b053979813bcaaa3ae34a14071e3 2176 SUPERFAMILY SSF141072 1336 1455 4.32E-13 T 12-10-2018 IPR038081 CalX-like domain superfamily Vc3S01_1608 22c9b053979813bcaaa3ae34a14071e3 2176 SUPERFAMILY SSF141072 684 804 5.1E-10 T 12-10-2018 IPR038081 CalX-like domain superfamily Vc3S01_1608 22c9b053979813bcaaa3ae34a14071e3 2176 Gene3D G3DSA:2.60.40.2030 1335 1459 5.3E-7 T 12-10-2018 IPR038081 CalX-like domain superfamily Vc3S01_1608 22c9b053979813bcaaa3ae34a14071e3 2176 Gene3D G3DSA:2.60.40.2030 1199 1325 6.0E-8 T 12-10-2018 IPR038081 CalX-like domain superfamily Vc3S01_1608 22c9b053979813bcaaa3ae34a14071e3 2176 Gene3D G3DSA:2.60.40.2030 1471 1603 1.1E-6 T 12-10-2018 IPR038081 CalX-like domain superfamily Vc3S01_1608 22c9b053979813bcaaa3ae34a14071e3 2176 SUPERFAMILY SSF141072 1599 1720 2.35E-12 T 12-10-2018 IPR038081 CalX-like domain superfamily Vc3S01_1608 22c9b053979813bcaaa3ae34a14071e3 2176 SUPERFAMILY SSF141072 938 1058 4.71E-9 T 12-10-2018 IPR038081 CalX-like domain superfamily Vc3S01_1608 22c9b053979813bcaaa3ae34a14071e3 2176 SUPERFAMILY SSF141072 1200 1319 3.66E-13 T 12-10-2018 IPR038081 CalX-like domain superfamily Vc3S01_1608 22c9b053979813bcaaa3ae34a14071e3 2176 SUPERFAMILY SSF141072 813 921 1.1E-9 T 12-10-2018 IPR038081 CalX-like domain superfamily Vc3S01_1608 22c9b053979813bcaaa3ae34a14071e3 2176 SMART SM00237 1186 1302 0.073 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 Vc3S01_1608 22c9b053979813bcaaa3ae34a14071e3 2176 SMART SM00237 272 388 0.11 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 Vc3S01_1608 22c9b053979813bcaaa3ae34a14071e3 2176 SMART SM00237 1050 1166 0.073 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 Vc3S01_1608 22c9b053979813bcaaa3ae34a14071e3 2176 SMART SM00237 1458 1574 0.018 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 Vc3S01_1608 22c9b053979813bcaaa3ae34a14071e3 2176 SMART SM00237 1322 1438 0.054 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 Vc3S01_1608 22c9b053979813bcaaa3ae34a14071e3 2176 SUPERFAMILY SSF141072 145 269 6.8E-14 T 12-10-2018 IPR038081 CalX-like domain superfamily Vc3S01_1608 22c9b053979813bcaaa3ae34a14071e3 2176 SUPERFAMILY SSF51120 2006 2156 1.44E-12 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal Vc3S01_1608 22c9b053979813bcaaa3ae34a14071e3 2176 Pfam PF03160 Calx-beta domain 1051 1122 6.3E-5 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 Vc3S01_1608 22c9b053979813bcaaa3ae34a14071e3 2176 Pfam PF03160 Calx-beta domain 542 644 0.026 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 Vc3S01_1608 22c9b053979813bcaaa3ae34a14071e3 2176 Pfam PF03160 Calx-beta domain 414 515 0.083 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 Vc3S01_1608 22c9b053979813bcaaa3ae34a14071e3 2176 Pfam PF03160 Calx-beta domain 358 385 2.2 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 Vc3S01_1608 22c9b053979813bcaaa3ae34a14071e3 2176 Pfam PF03160 Calx-beta domain 198 249 0.0054 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 Vc3S01_1608 22c9b053979813bcaaa3ae34a14071e3 2176 Pfam PF03160 Calx-beta domain 1585 1657 3.1E-4 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 Vc3S01_1608 22c9b053979813bcaaa3ae34a14071e3 2176 Pfam PF03160 Calx-beta domain 277 344 1.3E-6 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 Vc3S01_1608 22c9b053979813bcaaa3ae34a14071e3 2176 Pfam PF03160 Calx-beta domain 1405 1435 1.3 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 Vc3S01_1608 22c9b053979813bcaaa3ae34a14071e3 2176 Pfam PF03160 Calx-beta domain 1464 1571 2.8E-5 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 Vc3S01_1608 22c9b053979813bcaaa3ae34a14071e3 2176 Pfam PF03160 Calx-beta domain 1192 1258 2.3E-5 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 Vc3S01_1608 22c9b053979813bcaaa3ae34a14071e3 2176 Pfam PF03160 Calx-beta domain 1133 1163 4.2 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 Vc3S01_1608 22c9b053979813bcaaa3ae34a14071e3 2176 Pfam PF03160 Calx-beta domain 1672 1698 0.46 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 Vc3S01_1608 22c9b053979813bcaaa3ae34a14071e3 2176 Pfam PF03160 Calx-beta domain 671 773 0.0026 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 Vc3S01_1608 22c9b053979813bcaaa3ae34a14071e3 2176 Pfam PF03160 Calx-beta domain 1269 1299 1.3 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 Vc3S01_1608 22c9b053979813bcaaa3ae34a14071e3 2176 Pfam PF03160 Calx-beta domain 930 1000 0.057 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 Vc3S01_1608 22c9b053979813bcaaa3ae34a14071e3 2176 Pfam PF03160 Calx-beta domain 1328 1394 3.1E-5 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 Vc3S01_1608 22c9b053979813bcaaa3ae34a14071e3 2176 Pfam PF03160 Calx-beta domain 800 902 0.051 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 Vc3S01_1608 22c9b053979813bcaaa3ae34a14071e3 2176 SUPERFAMILY SSF141072 1472 1590 3.27E-11 T 12-10-2018 IPR038081 CalX-like domain superfamily Vc3S01_1629 9031be8c60a4bb9e9c67928b4e9ed74a 157 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 89 106 - T 12-10-2018 IPR000614 Free Met sulfoxide reductase conserved site Vc3S01_1629 9031be8c60a4bb9e9c67928b4e9ed74a 157 SUPERFAMILY SSF55781 4 145 2.75E-40 T 12-10-2018 Vc3S01_1629 9031be8c60a4bb9e9c67928b4e9ed74a 157 Pfam PF13185 GAF domain 37 144 3.2E-9 T 12-10-2018 IPR003018 GAF domain GO:0005515 Vc3S01_1629 9031be8c60a4bb9e9c67928b4e9ed74a 157 Gene3D G3DSA:3.30.450.40 2 157 4.3E-63 T 12-10-2018 IPR029016 GAF-like domain superfamily Vc3S01_1849 037db7c9984cb10e3a5fe3307561e72d 473 Gene3D G3DSA:1.20.1280.70 357 418 5.9E-26 T 12-10-2018 Vc3S01_1849 037db7c9984cb10e3a5fe3307561e72d 473 Pfam PF00929 Exonuclease 11 190 3.2E-23 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Vc3S01_1849 037db7c9984cb10e3a5fe3307561e72d 473 Pfam PF08411 Exonuclease C-terminal 210 469 4.0E-101 T 12-10-2018 IPR013620 Exodeoxyribonuclease I, C-terminal GO:0006281|GO:0008852 Vc3S01_1849 037db7c9984cb10e3a5fe3307561e72d 473 PIRSF PIRSF000977 1 473 6.2E-197 T 12-10-2018 IPR023607 Exodeoxyribonuclease I GO:0004529 Vc3S01_1849 037db7c9984cb10e3a5fe3307561e72d 473 SUPERFAMILY SSF53098 7 471 4.49E-138 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Vc3S01_1849 037db7c9984cb10e3a5fe3307561e72d 473 Gene3D G3DSA:2.30.30.450 212 350 7.5E-55 T 12-10-2018 IPR038649 Exonuclease I, SH3-like domain superfamily Vc3S01_1849 037db7c9984cb10e3a5fe3307561e72d 473 Gene3D G3DSA:3.30.420.10 1 199 2.8E-73 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Vc3S01_1849 037db7c9984cb10e3a5fe3307561e72d 473 SMART SM00479 8 201 0.0024 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Vc3S01_1213 03019168aba6ef189f6cb9b325eef9da 188 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 165 8.5E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_1213 03019168aba6ef189f6cb9b325eef9da 188 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 137 153 8.5E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_1213 03019168aba6ef189f6cb9b325eef9da 188 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 123 137 8.5E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_1213 03019168aba6ef189f6cb9b325eef9da 188 Gene3D G3DSA:3.40.50.12740 1 183 2.5E-50 T 12-10-2018 Vc3S01_1213 03019168aba6ef189f6cb9b325eef9da 188 SUPERFAMILY SSF46894 110 184 9.18E-19 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Vc3S01_1213 03019168aba6ef189f6cb9b325eef9da 188 SMART SM00448 1 89 1.2E-8 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_1213 03019168aba6ef189f6cb9b325eef9da 188 SMART SM00421 120 177 2.6E-16 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_1213 03019168aba6ef189f6cb9b325eef9da 188 SUPERFAMILY SSF52172 3 106 1.85E-26 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_1213 03019168aba6ef189f6cb9b325eef9da 188 ProSitePatterns PS00622 LuxR-type HTH domain signature. 137 164 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_1213 03019168aba6ef189f6cb9b325eef9da 188 Pfam PF00196 Bacterial regulatory proteins, luxR family 123 177 1.4E-18 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_1213 03019168aba6ef189f6cb9b325eef9da 188 Pfam PF00072 Response regulator receiver domain 2 90 1.7E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_3096 4c15188e79b714f8136796e1339508e1 82 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 81 24.775 T 12-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 Vc3S01_3096 4c15188e79b714f8136796e1339508e1 82 Pfam PF02416 mttA/Hcf106 family 4 52 6.5E-13 T 12-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 Vc3S01_3096 4c15188e79b714f8136796e1339508e1 82 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 47 5.4E-21 T 12-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 Vc3S01_3083 3bcb7232b405e100eca1c7a4659f8a84 212 Pfam PF13489 Methyltransferase domain 63 192 1.3E-16 T 12-10-2018 Vc3S01_3083 3bcb7232b405e100eca1c7a4659f8a84 212 Gene3D G3DSA:3.40.50.150 2 110 3.8E-5 T 12-10-2018 Vc3S01_3083 3bcb7232b405e100eca1c7a4659f8a84 212 Gene3D G3DSA:3.40.50.150 111 206 1.6E-7 T 12-10-2018 Vc3S01_3083 3bcb7232b405e100eca1c7a4659f8a84 212 SUPERFAMILY SSF53335 47 199 4.87E-19 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Vc3S01_1668 91fdc8a9b629b4e280f5d6e34937ec2d 397 Pfam PF08402 TOBE domain 312 391 8.6E-12 T 12-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Vc3S01_1668 91fdc8a9b629b4e280f5d6e34937ec2d 397 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_1668 91fdc8a9b629b4e280f5d6e34937ec2d 397 Gene3D G3DSA:2.40.50.140 319 336 8.9E-12 T 12-10-2018 Vc3S01_1668 91fdc8a9b629b4e280f5d6e34937ec2d 397 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 68 391 4.1E-156 T 12-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 Vc3S01_1668 91fdc8a9b629b4e280f5d6e34937ec2d 397 SUPERFAMILY SSF52540 38 277 1.08E-87 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_1668 91fdc8a9b629b4e280f5d6e34937ec2d 397 Pfam PF00005 ABC transporter 55 194 1.2E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_1668 91fdc8a9b629b4e280f5d6e34937ec2d 397 SUPERFAMILY SSF50331 270 392 1.59E-8 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Vc3S01_1668 91fdc8a9b629b4e280f5d6e34937ec2d 397 Gene3D G3DSA:3.40.50.300 37 255 9.6E-69 T 12-10-2018 Vc3S01_1668 91fdc8a9b629b4e280f5d6e34937ec2d 397 Gene3D G3DSA:2.40.50.940 256 318 8.9E-12 T 12-10-2018 Vc3S01_1668 91fdc8a9b629b4e280f5d6e34937ec2d 397 SMART SM00382 62 245 4.2E-20 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_2235 18ab79f92075444e21e97e985243cd7f 72 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 12-10-2018 IPR019844 Cold-shock conserved site Vc3S01_2235 18ab79f92075444e21e97e985243cd7f 72 Gene3D G3DSA:2.40.50.140 2 65 9.5E-26 T 12-10-2018 Vc3S01_2235 18ab79f92075444e21e97e985243cd7f 72 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 6.0E-28 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Vc3S01_2235 18ab79f92075444e21e97e985243cd7f 72 PRINTS PR00050 Cold shock protein signature 40 58 8.3E-15 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Vc3S01_2235 18ab79f92075444e21e97e985243cd7f 72 PRINTS PR00050 Cold shock protein signature 4 19 8.3E-15 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Vc3S01_2235 18ab79f92075444e21e97e985243cd7f 72 PRINTS PR00050 Cold shock protein signature 25 34 8.3E-15 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Vc3S01_2235 18ab79f92075444e21e97e985243cd7f 72 SMART SM00357 3 67 2.9E-24 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 Vc3S01_2235 18ab79f92075444e21e97e985243cd7f 72 SUPERFAMILY SSF50249 1 67 9.64E-23 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Vc3S01_2235 18ab79f92075444e21e97e985243cd7f 72 PIRSF PIRSF002599 1 72 5.4E-23 T 12-10-2018 IPR012156 Cold shock, CspA GO:0003676 Vc3S01_2235 18ab79f92075444e21e97e985243cd7f 72 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 1 68 1.6E-41 T 12-10-2018 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355 Vc3S01_A1048 f57a3d5b52c3dc821567c15042683d6c 404 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 10 29 - T 12-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Vc3S01_A1048 f57a3d5b52c3dc821567c15042683d6c 404 SUPERFAMILY SSF53448 4 358 1.08E-80 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Vc3S01_A1048 f57a3d5b52c3dc821567c15042683d6c 404 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 194 204 - T 12-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Vc3S01_A1048 f57a3d5b52c3dc821567c15042683d6c 404 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 96 104 - T 12-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Vc3S01_A1048 f57a3d5b52c3dc821567c15042683d6c 404 Gene3D G3DSA:3.90.550.10 1 281 3.0E-93 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Vc3S01_A1048 f57a3d5b52c3dc821567c15042683d6c 404 SUPERFAMILY SSF51161 312 396 3.98E-17 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily Vc3S01_A1048 f57a3d5b52c3dc821567c15042683d6c 404 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 5 378 1.9E-155 T 12-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Vc3S01_A1048 f57a3d5b52c3dc821567c15042683d6c 404 Pfam PF00483 Nucleotidyl transferase 6 272 1.1E-70 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Vc3S01_A1048 f57a3d5b52c3dc821567c15042683d6c 404 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 1 404 50.181 T 12-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Vc3S01_A1048 f57a3d5b52c3dc821567c15042683d6c 404 Gene3D G3DSA:2.160.10.10 282 402 1.0E-32 T 12-10-2018 Vc3S01_A1735 3d084ddee35f7466cc03939352364c51 270 Pfam PF01048 Phosphorylase superfamily 26 244 2.5E-35 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 Vc3S01_A1735 3d084ddee35f7466cc03939352364c51 270 Gene3D G3DSA:3.40.50.1580 22 270 4.0E-91 T 12-10-2018 Vc3S01_A1735 3d084ddee35f7466cc03939352364c51 270 SUPERFAMILY SSF53167 26 250 1.44E-44 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 Vc3S01_A0100 0abd8f1957eebf4c032657a17c654885 339 Gene3D G3DSA:3.40.50.2300 165 294 8.2E-73 T 12-10-2018 Vc3S01_A0100 0abd8f1957eebf4c032657a17c654885 339 Gene3D G3DSA:1.10.260.40 6 66 2.4E-15 T 12-10-2018 Vc3S01_A0100 0abd8f1957eebf4c032657a17c654885 339 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 19 29 5.7E-5 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Vc3S01_A0100 0abd8f1957eebf4c032657a17c654885 339 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 9 19 5.7E-5 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Vc3S01_A0100 0abd8f1957eebf4c032657a17c654885 339 Pfam PF00356 Bacterial regulatory proteins, lacI family 9 54 1.5E-15 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Vc3S01_A0100 0abd8f1957eebf4c032657a17c654885 339 SUPERFAMILY SSF47413 7 57 7.31E-12 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Vc3S01_A0100 0abd8f1957eebf4c032657a17c654885 339 SMART SM00354 7 77 7.0E-18 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Vc3S01_A0100 0abd8f1957eebf4c032657a17c654885 339 Pfam PF13377 Periplasmic binding protein-like domain 175 332 4.5E-34 T 12-10-2018 Vc3S01_A0100 0abd8f1957eebf4c032657a17c654885 339 Gene3D G3DSA:3.40.50.2300 67 309 8.2E-73 T 12-10-2018 Vc3S01_A0100 0abd8f1957eebf4c032657a17c654885 339 ProSitePatterns PS00356 LacI-type HTH domain signature. 10 28 - T 12-10-2018 Vc3S01_A0100 0abd8f1957eebf4c032657a17c654885 339 SUPERFAMILY SSF53822 67 333 4.71E-74 T 12-10-2018 IPR028082 Periplasmic binding protein-like I Vc3S01_p20162 799649f4bcf48c176e108d6d6468ee1f 276 SUPERFAMILY SSF56112 10 261 4.2E-33 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily Vc3S01_p20162 799649f4bcf48c176e108d6d6468ee1f 276 Pfam PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase 8 254 3.1E-109 T 12-10-2018 IPR006748 Aminoglycoside/hydroxyurea antibiotic resistance kinase GO:0006468|GO:0016773|GO:0019748 Vc3S01_A1645 01fd7199be6d6b7329cb00663d700866 128 SUPERFAMILY SSF142906 1 118 8.11E-30 T 12-10-2018 IPR038056 YjbR-like superfamily Vc3S01_A1645 01fd7199be6d6b7329cb00663d700866 128 Pfam PF04237 YjbR 12 103 2.2E-13 T 12-10-2018 IPR007351 Uncharacterised protein YjbR Vc3S01_A1645 01fd7199be6d6b7329cb00663d700866 128 Gene3D G3DSA:3.90.1150.30 1 120 2.8E-13 T 12-10-2018 IPR038056 YjbR-like superfamily Vc3S01_A1360 5b304026e6dd91407cf184485abf682d 689 Gene3D G3DSA:1.10.10.160 300 416 7.9E-50 T 12-10-2018 IPR013986 DExx box DNA helicase domain superfamily Vc3S01_A1360 5b304026e6dd91407cf184485abf682d 689 Pfam PF12462 DNA helicase IV / RNA helicase N terminal 1 166 6.1E-47 T 12-10-2018 IPR022161 DNA helicase IV, N-terminal domain Vc3S01_A1360 5b304026e6dd91407cf184485abf682d 689 Pfam PF13361 UvrD-like helicase C-terminal domain 596 667 1.5E-17 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Vc3S01_A1360 5b304026e6dd91407cf184485abf682d 689 Gene3D G3DSA:3.40.50.300 507 681 1.0E-29 T 12-10-2018 Vc3S01_A1360 5b304026e6dd91407cf184485abf682d 689 SUPERFAMILY SSF52540 198 678 6.24E-85 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A1360 5b304026e6dd91407cf184485abf682d 689 Gene3D G3DSA:3.40.50.300 200 499 7.9E-50 T 12-10-2018 Vc3S01_A1360 5b304026e6dd91407cf184485abf682d 689 Pfam PF00580 UvrD/REP helicase N-terminal domain 201 498 6.9E-40 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 Vc3S01_A0595 265e6a3bcd69f8418c845b1411ec0525 550 Pfam PF00884 Sulfatase 242 532 2.2E-47 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 Vc3S01_A0595 265e6a3bcd69f8418c845b1411ec0525 550 Gene3D G3DSA:3.40.720.10 218 550 3.4E-86 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Vc3S01_A0595 265e6a3bcd69f8418c845b1411ec0525 550 SUPERFAMILY SSF53649 320 537 8.41E-19 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Vc3S01_A0595 265e6a3bcd69f8418c845b1411ec0525 550 Pfam PF08019 Domain of unknown function (DUF1705) 58 211 3.6E-49 T 12-10-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 Vc3S01_A1290 b65139cce146d06280602f4722599e42 1129 Pfam PF06744 Type VI secretion protein IcmF C-terminal 879 1078 2.1E-47 T 12-10-2018 IPR010623 Type VI secretion system IcmF, C-terminal Vc3S01_A1290 b65139cce146d06280602f4722599e42 1129 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 92 1127 2.4E-173 T 12-10-2018 IPR017731 Type VI secretion system, IcmF Vc3S01_A1290 b65139cce146d06280602f4722599e42 1129 Pfam PF06761 Intracellular multiplication and human macrophage-killing 486 755 1.9E-43 T 12-10-2018 IPR009612 ImcF-related Vc3S01_A1290 b65139cce146d06280602f4722599e42 1129 Pfam PF14331 ImcF-related N-terminal domain 154 408 8.7E-50 T 12-10-2018 IPR025743 ImcF-related, N-terminal domain Vc3S01_2049 49e14ad0bdb38e4f301b40b6a4544ca6 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 1 241 34.541 T 12-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 Vc3S01_2049 49e14ad0bdb38e4f301b40b6a4544ca6 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 2 238 2.4E-77 T 12-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 Vc3S01_2049 49e14ad0bdb38e4f301b40b6a4544ca6 245 Pfam PF00977 Histidine biosynthesis protein 2 234 3.5E-75 T 12-10-2018 IPR006062 Histidine biosynthesis GO:0000105 Vc3S01_2049 49e14ad0bdb38e4f301b40b6a4544ca6 245 Gene3D G3DSA:3.20.20.70 1 245 6.8E-89 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_2049 49e14ad0bdb38e4f301b40b6a4544ca6 245 SUPERFAMILY SSF51366 2 242 3.77E-63 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Vc3S01_A1340 9e8ee897dd6a7933ea007d1bfa0d2df3 78 ProSitePatterns PS00605 ATP synthase c subunit signature. 39 60 - T 12-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_A1340 9e8ee897dd6a7933ea007d1bfa0d2df3 78 Gene3D G3DSA:1.20.20.10 1 78 1.0E-27 T 12-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_A1340 9e8ee897dd6a7933ea007d1bfa0d2df3 78 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 20 76 1.8E-27 T 12-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 Vc3S01_A1340 9e8ee897dd6a7933ea007d1bfa0d2df3 78 PRINTS PR00124 ATP synthase C subunit signature 32 47 4.7E-11 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_A1340 9e8ee897dd6a7933ea007d1bfa0d2df3 78 PRINTS PR00124 ATP synthase C subunit signature 11 30 4.7E-11 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_A1340 9e8ee897dd6a7933ea007d1bfa0d2df3 78 PRINTS PR00124 ATP synthase C subunit signature 49 74 4.7E-11 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_A1340 9e8ee897dd6a7933ea007d1bfa0d2df3 78 SUPERFAMILY SSF81333 2 76 9.29E-17 T 12-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily Vc3S01_A1340 9e8ee897dd6a7933ea007d1bfa0d2df3 78 Hamap MF_01396 ATP synthase subunit c [atpH]. 9 74 13.56 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_A1340 9e8ee897dd6a7933ea007d1bfa0d2df3 78 Pfam PF00137 ATP synthase subunit C 11 73 9.3E-9 T 12-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 Vc3S01_0177 0873cfd5ecd6753de77f40267914fc4a 536 Pfam PF02142 MGS-like domain 19 132 4.6E-31 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain Vc3S01_0177 0873cfd5ecd6753de77f40267914fc4a 536 Gene3D G3DSA:3.40.140.20 400 536 1.5E-60 T 12-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Vc3S01_0177 0873cfd5ecd6753de77f40267914fc4a 536 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 8 536 4.8E-260 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Vc3S01_0177 0873cfd5ecd6753de77f40267914fc4a 536 PIRSF PIRSF000414 1 536 5.1E-228 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Vc3S01_0177 0873cfd5ecd6753de77f40267914fc4a 536 SUPERFAMILY SSF53927 228 536 9.43E-131 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Vc3S01_0177 0873cfd5ecd6753de77f40267914fc4a 536 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 467 4.8E-119 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Vc3S01_0177 0873cfd5ecd6753de77f40267914fc4a 536 SMART SM00851 19 132 1.9E-61 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain Vc3S01_0177 0873cfd5ecd6753de77f40267914fc4a 536 SUPERFAMILY SSF52335 7 197 4.32E-72 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Vc3S01_0177 0873cfd5ecd6753de77f40267914fc4a 536 SMART SM00798 137 468 2.4E-217 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Vc3S01_0177 0873cfd5ecd6753de77f40267914fc4a 536 Gene3D G3DSA:3.40.50.1380 1 200 8.8E-88 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Vc3S01_0177 0873cfd5ecd6753de77f40267914fc4a 536 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 536 45.888 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Vc3S01_0177 0873cfd5ecd6753de77f40267914fc4a 536 Gene3D G3DSA:3.40.140.20 225 381 2.8E-58 T 12-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Vc3S01_A1713 cfbe2960ae157c433594896760700b66 1052 Gene3D G3DSA:3.30.2090.10 180 270 2.2E-251 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Vc3S01_A1713 cfbe2960ae157c433594896760700b66 1052 SUPERFAMILY SSF82866 791 1019 1.83E-49 T 12-10-2018 Vc3S01_A1713 cfbe2960ae157c433594896760700b66 1052 Gene3D G3DSA:3.30.70.1320 139 327 2.2E-251 T 12-10-2018 Vc3S01_A1713 cfbe2960ae157c433594896760700b66 1052 SUPERFAMILY SSF82714 719 793 4.71E-7 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Vc3S01_A1713 cfbe2960ae157c433594896760700b66 1052 Gene3D G3DSA:3.30.70.1430 46 803 2.2E-251 T 12-10-2018 Vc3S01_A1713 cfbe2960ae157c433594896760700b66 1052 Gene3D G3DSA:1.20.1640.10 502 1013 2.2E-251 T 12-10-2018 Vc3S01_A1713 cfbe2960ae157c433594896760700b66 1052 SUPERFAMILY SSF82866 292 488 9.16E-36 T 12-10-2018 Vc3S01_A1713 cfbe2960ae157c433594896760700b66 1052 Gene3D G3DSA:3.30.70.1430 559 659 2.2E-251 T 12-10-2018 Vc3S01_A1713 cfbe2960ae157c433594896760700b66 1052 Gene3D G3DSA:3.30.70.1440 660 856 2.2E-251 T 12-10-2018 Vc3S01_A1713 cfbe2960ae157c433594896760700b66 1052 SUPERFAMILY SSF82714 185 266 3.92E-14 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Vc3S01_A1713 cfbe2960ae157c433594896760700b66 1052 Gene3D G3DSA:3.30.2090.10 708 795 2.2E-251 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Vc3S01_A1713 cfbe2960ae157c433594896760700b66 1052 SUPERFAMILY SSF82693 149 325 5.07E-10 T 12-10-2018 Vc3S01_A1713 cfbe2960ae157c433594896760700b66 1052 SUPERFAMILY SSF82693 46 138 1.1E-17 T 12-10-2018 Vc3S01_A1713 cfbe2960ae157c433594896760700b66 1052 PRINTS PR00702 Acriflavin resistance protein family signature 44 62 1.0E-20 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_A1713 cfbe2960ae157c433594896760700b66 1052 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 1.0E-20 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_A1713 cfbe2960ae157c433594896760700b66 1052 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.0E-20 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_A1713 cfbe2960ae157c433594896760700b66 1052 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.0E-20 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_A1713 cfbe2960ae157c433594896760700b66 1052 PRINTS PR00702 Acriflavin resistance protein family signature 16 40 1.0E-20 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_A1713 cfbe2960ae157c433594896760700b66 1052 Gene3D G3DSA:1.20.1640.10 16 501 2.2E-251 T 12-10-2018 Vc3S01_A1713 cfbe2960ae157c433594896760700b66 1052 Pfam PF00873 AcrB/AcrD/AcrF family 9 1016 1.0E-155 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_0259 72e80deb307bb521877205c0f69a9a40 394 SUPERFAMILY SSF52343 255 393 1.7E-35 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Vc3S01_0259 72e80deb307bb521877205c0f69a9a40 394 Pfam PF00175 Oxidoreductase NAD-binding domain 264 370 1.4E-17 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 Vc3S01_0259 72e80deb307bb521877205c0f69a9a40 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 356 364 4.8E-9 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Vc3S01_0259 72e80deb307bb521877205c0f69a9a40 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 247 256 4.8E-9 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Vc3S01_0259 72e80deb307bb521877205c0f69a9a40 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 263 282 4.8E-9 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Vc3S01_0259 72e80deb307bb521877205c0f69a9a40 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 183 195 4.8E-9 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Vc3S01_0259 72e80deb307bb521877205c0f69a9a40 394 Hamap MF_01252 Flavohemoprotein [hmp]. 1 394 55.747 T 12-10-2018 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 Vc3S01_0259 72e80deb307bb521877205c0f69a9a40 394 SUPERFAMILY SSF63380 148 253 1.55E-28 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Vc3S01_0259 72e80deb307bb521877205c0f69a9a40 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 183 193 8.0E-8 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Vc3S01_0259 72e80deb307bb521877205c0f69a9a40 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 263 282 8.0E-8 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Vc3S01_0259 72e80deb307bb521877205c0f69a9a40 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 204 211 8.0E-8 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Vc3S01_0259 72e80deb307bb521877205c0f69a9a40 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 356 364 8.0E-8 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Vc3S01_0259 72e80deb307bb521877205c0f69a9a40 394 Pfam PF00042 Globin 8 102 5.8E-14 T 12-10-2018 IPR000971 Globin GO:0020037 Vc3S01_0259 72e80deb307bb521877205c0f69a9a40 394 Gene3D G3DSA:1.10.490.10 1 143 4.3E-51 T 12-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 Vc3S01_0259 72e80deb307bb521877205c0f69a9a40 394 Pfam PF00970 Oxidoreductase FAD-binding domain 155 252 2.0E-13 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 Vc3S01_0259 72e80deb307bb521877205c0f69a9a40 394 Gene3D G3DSA:3.40.50.80 256 394 2.1E-32 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Vc3S01_0259 72e80deb307bb521877205c0f69a9a40 394 Gene3D G3DSA:2.40.30.10 149 254 2.0E-32 T 12-10-2018 Vc3S01_0259 72e80deb307bb521877205c0f69a9a40 394 SUPERFAMILY SSF46458 1 142 1.26E-37 T 12-10-2018 IPR009050 Globin-like superfamily Vc3S01_A1851 5aece73ae6f608958767375771821e73 434 Pfam PF00375 Sodium:dicarboxylate symporter family 9 405 1.6E-130 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Vc3S01_A1851 5aece73ae6f608958767375771821e73 434 Gene3D G3DSA:1.10.3860.10 2 413 6.6E-140 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 Vc3S01_A1851 5aece73ae6f608958767375771821e73 434 SUPERFAMILY SSF118215 9 407 6.54E-121 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 Vc3S01_A1851 5aece73ae6f608958767375771821e73 434 PRINTS PR00173 Glutamate-aspartate symporter signature 231 250 7.4E-52 T 12-10-2018 Vc3S01_A1851 5aece73ae6f608958767375771821e73 434 PRINTS PR00173 Glutamate-aspartate symporter signature 7 27 7.4E-52 T 12-10-2018 Vc3S01_A1851 5aece73ae6f608958767375771821e73 434 PRINTS PR00173 Glutamate-aspartate symporter signature 86 111 7.4E-52 T 12-10-2018 Vc3S01_A1851 5aece73ae6f608958767375771821e73 434 PRINTS PR00173 Glutamate-aspartate symporter signature 56 76 7.4E-52 T 12-10-2018 Vc3S01_A1851 5aece73ae6f608958767375771821e73 434 PRINTS PR00173 Glutamate-aspartate symporter signature 333 352 7.4E-52 T 12-10-2018 Vc3S01_A1851 5aece73ae6f608958767375771821e73 434 PRINTS PR00173 Glutamate-aspartate symporter signature 298 324 7.4E-52 T 12-10-2018 Vc3S01_A1851 5aece73ae6f608958767375771821e73 434 PRINTS PR00173 Glutamate-aspartate symporter signature 360 380 7.4E-52 T 12-10-2018 Vc3S01_A1851 5aece73ae6f608958767375771821e73 434 PRINTS PR00173 Glutamate-aspartate symporter signature 196 215 7.4E-52 T 12-10-2018 Vc3S01_A1469 99e34a0684fa075a0a1211704878ff23 431 SMART SM00636 23 416 1.5E-104 T 12-10-2018 IPR011583 Chitinase II GO:0008061 Vc3S01_A1469 99e34a0684fa075a0a1211704878ff23 431 ProSitePatterns PS01095 Chitinases family 18 active site. 169 177 - T 12-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 Vc3S01_A1469 99e34a0684fa075a0a1211704878ff23 431 SUPERFAMILY SSF51445 19 418 6.53E-80 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily Vc3S01_A1469 99e34a0684fa075a0a1211704878ff23 431 SUPERFAMILY SSF54556 313 387 4.43E-18 T 12-10-2018 IPR029070 Chitinase insertion domain superfamily Vc3S01_A1469 99e34a0684fa075a0a1211704878ff23 431 Pfam PF00704 Glycosyl hydrolases family 18 25 416 5.0E-80 T 12-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 Vc3S01_A1469 99e34a0684fa075a0a1211704878ff23 431 Gene3D G3DSA:3.20.20.80 23 422 9.7E-119 T 12-10-2018 Vc3S01_A1469 99e34a0684fa075a0a1211704878ff23 431 Gene3D G3DSA:3.10.50.10 312 390 9.7E-119 T 12-10-2018 IPR029070 Chitinase insertion domain superfamily Vc3S01_0199 90ec6b6d0a6c58986af1d64e4d073801 1143 Gene3D G3DSA:3.40.50.2300 1013 1143 1.1E-17 T 12-10-2018 Vc3S01_0199 90ec6b6d0a6c58986af1d64e4d073801 1143 SMART SM00388 788 853 2.4E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_0199 90ec6b6d0a6c58986af1d64e4d073801 1143 SUPERFAMILY SSF47384 773 854 3.53E-14 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Vc3S01_0199 90ec6b6d0a6c58986af1d64e4d073801 1143 SMART SM00387 897 1006 4.2E-28 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_0199 90ec6b6d0a6c58986af1d64e4d073801 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 966 984 1.3E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_0199 90ec6b6d0a6c58986af1d64e4d073801 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 933 947 1.3E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_0199 90ec6b6d0a6c58986af1d64e4d073801 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 990 1003 1.3E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_0199 90ec6b6d0a6c58986af1d64e4d073801 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 951 961 1.3E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_0199 90ec6b6d0a6c58986af1d64e4d073801 1143 SMART SM00448 1026 1139 5.2E-16 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_0199 90ec6b6d0a6c58986af1d64e4d073801 1143 Gene3D G3DSA:3.30.450.20 616 745 2.7E-11 T 12-10-2018 Vc3S01_0199 90ec6b6d0a6c58986af1d64e4d073801 1143 Pfam PF12860 PAS fold 634 748 1.0E-43 T 12-10-2018 Vc3S01_0199 90ec6b6d0a6c58986af1d64e4d073801 1143 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 898 1004 4.1E-19 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_0199 90ec6b6d0a6c58986af1d64e4d073801 1143 Pfam PF00512 His Kinase A (phospho-acceptor) domain 788 853 9.9E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_0199 90ec6b6d0a6c58986af1d64e4d073801 1143 SUPERFAMILY SSF55785 626 741 1.74E-8 T 12-10-2018 IPR035965 PAS domain superfamily Vc3S01_0199 90ec6b6d0a6c58986af1d64e4d073801 1143 SUPERFAMILY SSF55874 843 1002 1.13E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_0199 90ec6b6d0a6c58986af1d64e4d073801 1143 Gene3D G3DSA:1.10.287.130 746 851 4.4E-15 T 12-10-2018 Vc3S01_0199 90ec6b6d0a6c58986af1d64e4d073801 1143 Gene3D G3DSA:3.30.565.10 859 1010 7.2E-35 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_0199 90ec6b6d0a6c58986af1d64e4d073801 1143 SUPERFAMILY SSF52172 1025 1142 1.85E-19 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_0199 90ec6b6d0a6c58986af1d64e4d073801 1143 Pfam PF00072 Response regulator receiver domain 1028 1139 5.8E-12 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_1896 2dbb8cdf5048e04067e0212f76e2b625 565 ProSitePatterns PS01233 Urocanase signature. 444 459 - T 12-10-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Vc3S01_1896 2dbb8cdf5048e04067e0212f76e2b625 565 PIRSF PIRSF001423 1 563 1.1E-295 T 12-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Vc3S01_1896 2dbb8cdf5048e04067e0212f76e2b625 565 Gene3D G3DSA:3.40.50.10730 147 351 2.3E-258 T 12-10-2018 IPR038364 Urocanase, central domain superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Vc3S01_1896 2dbb8cdf5048e04067e0212f76e2b625 565 Pfam PF17391 Urocanase N-terminal domain 17 143 1.9E-62 T 12-10-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Vc3S01_1896 2dbb8cdf5048e04067e0212f76e2b625 565 TIGRFAM TIGR01228 hutU: urocanate hydratase 15 556 3.3E-292 T 12-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Vc3S01_1896 2dbb8cdf5048e04067e0212f76e2b625 565 SUPERFAMILY SSF111326 11 557 4.19E-260 T 12-10-2018 IPR036190 Urocanase superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Vc3S01_1896 2dbb8cdf5048e04067e0212f76e2b625 565 Pfam PF17392 Urocanase C-terminal domain 354 548 1.3E-91 T 12-10-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Vc3S01_1896 2dbb8cdf5048e04067e0212f76e2b625 565 Pfam PF01175 Urocanase Rossmann-like domain 146 351 7.2E-85 T 12-10-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Vc3S01_1896 2dbb8cdf5048e04067e0212f76e2b625 565 Gene3D G3DSA:3.40.1770.10 22 544 2.3E-258 T 12-10-2018 Vc3S01_1896 2dbb8cdf5048e04067e0212f76e2b625 565 Hamap MF_00577 Urocanate hydratase [hutU]. 2 558 49.444 T 12-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Vc3S01_0071 02b722dc597b5f74f6728251a452f904 586 SUPERFAMILY SSF49785 457 584 5.95E-15 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily Vc3S01_0071 02b722dc597b5f74f6728251a452f904 586 Gene3D G3DSA:2.60.120.260 450 585 9.3E-15 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily Vc3S01_0071 02b722dc597b5f74f6728251a452f904 586 Pfam PF00754 F5/8 type C domain 458 565 8.9E-8 T 12-10-2018 IPR000421 Coagulation factor 5/8 C-terminal domain Vc3S01_0071 02b722dc597b5f74f6728251a452f904 586 Pfam PF07394 Protein of unknown function (DUF1501) 41 388 3.7E-40 T 12-10-2018 IPR010869 Protein of unknown function DUF1501 Vc3S01_0071 02b722dc597b5f74f6728251a452f904 586 SUPERFAMILY SSF53649 271 421 6.98E-5 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Vc3S01_2716 73efdf8b3332a303671a4289efa99e63 273 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 262 20.117 T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Vc3S01_2716 73efdf8b3332a303671a4289efa99e63 273 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 142 154 - T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Vc3S01_2716 73efdf8b3332a303671a4289efa99e63 273 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 13 257 5.9E-83 T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Vc3S01_2716 73efdf8b3332a303671a4289efa99e63 273 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 4 262 2.6E-90 T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Vc3S01_1850 7971e7be2ef9e2d5c3cb8a5cec91145b 105 Pfam PF03788 LrgA family 6 96 2.9E-25 T 12-10-2018 IPR005538 LrgA/CidA family GO:0016021 Vc3S01_1021 9062606280f7da92526c1bf899948150 222 Pfam PF07996 Type IV secretion system proteins 23 204 1.0E-20 T 12-10-2018 IPR014158 Type IV secretion system, VirB5 Vc3S01_1021 9062606280f7da92526c1bf899948150 222 Gene3D G3DSA:1.20.58.430 23 205 4.3E-11 T 12-10-2018 IPR023220 Type IV secretion system, VirB5-domain Vc3S01_1021 9062606280f7da92526c1bf899948150 222 SUPERFAMILY SSF101082 23 204 5.36E-20 T 12-10-2018 Vc3S01_1464 19229c4001403a628f358b68de27a623 313 SUPERFAMILY SSF52317 18 297 3.96E-102 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Vc3S01_1464 19229c4001403a628f358b68de27a623 313 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 301 7.6E-163 T 12-10-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 Vc3S01_1464 19229c4001403a628f358b68de27a623 313 Pfam PF04204 Homoserine O-succinyltransferase 2 299 2.0E-135 T 12-10-2018 IPR033752 MetA family Vc3S01_1464 19229c4001403a628f358b68de27a623 313 PIRSF PIRSF000450 1 309 4.3E-148 T 12-10-2018 IPR033752 MetA family Vc3S01_1464 19229c4001403a628f358b68de27a623 313 Hamap MF_00295 Homoserine O-succinyltransferase [metAS]. 31 299 41.201 T 12-10-2018 IPR033752 MetA family Vc3S01_1464 19229c4001403a628f358b68de27a623 313 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 3.0E-128 T 12-10-2018 Vc3S01_1464 19229c4001403a628f358b68de27a623 313 Gene3D G3DSA:3.40.50.880 1 301 5.8E-125 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Vc3S01_0438 3b484e9c598f8b6f6e85c4f3a14e4d87 301 Gene3D G3DSA:1.10.10.10 2 140 8.5E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_0438 3b484e9c598f8b6f6e85c4f3a14e4d87 301 Pfam PF12802 MarR family 28 85 2.0E-13 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Vc3S01_0438 3b484e9c598f8b6f6e85c4f3a14e4d87 301 PRINTS PR00598 Bacterial regulatory protein MarR family signature 111 131 2.6E-7 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Vc3S01_0438 3b484e9c598f8b6f6e85c4f3a14e4d87 301 PRINTS PR00598 Bacterial regulatory protein MarR family signature 62 77 2.6E-7 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Vc3S01_0438 3b484e9c598f8b6f6e85c4f3a14e4d87 301 PRINTS PR00598 Bacterial regulatory protein MarR family signature 81 97 2.6E-7 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Vc3S01_0438 3b484e9c598f8b6f6e85c4f3a14e4d87 301 PRINTS PR00598 Bacterial regulatory protein MarR family signature 45 61 2.6E-7 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Vc3S01_0438 3b484e9c598f8b6f6e85c4f3a14e4d87 301 Pfam PF00583 Acetyltransferase (GNAT) family 193 278 3.3E-13 T 12-10-2018 IPR000182 GNAT domain Vc3S01_0438 3b484e9c598f8b6f6e85c4f3a14e4d87 301 ProSitePatterns PS01117 MarR-type HTH domain signature. 60 94 - T 12-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site Vc3S01_0438 3b484e9c598f8b6f6e85c4f3a14e4d87 301 SUPERFAMILY SSF55729 144 301 7.38E-28 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_0438 3b484e9c598f8b6f6e85c4f3a14e4d87 301 SUPERFAMILY SSF46785 7 135 2.3E-27 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_0438 3b484e9c598f8b6f6e85c4f3a14e4d87 301 Gene3D G3DSA:3.40.630.30 144 301 1.9E-23 T 12-10-2018 Vc3S01_0438 3b484e9c598f8b6f6e85c4f3a14e4d87 301 SMART SM00347 22 121 6.1E-18 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Vc3S01_1534 8a3cd386d95c0d1561832132da2cfeec 334 Hamap MF_01206 Protein-methionine-sulfoxide reductase catalytic subunit MsrP [msrP]. 9 334 54.653 T 12-10-2018 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 Vc3S01_1534 8a3cd386d95c0d1561832132da2cfeec 334 Pfam PF00174 Oxidoreductase molybdopterin binding domain 112 267 3.6E-32 T 12-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 Vc3S01_1534 8a3cd386d95c0d1561832132da2cfeec 334 Gene3D G3DSA:3.90.420.10 67 334 1.7E-114 T 12-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 Vc3S01_1534 8a3cd386d95c0d1561832132da2cfeec 334 SUPERFAMILY SSF56524 76 330 1.11E-93 T 12-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 Vc3S01_1067 071ccd09fe88640a4afa01bc63050e7c 311 Pfam PF02653 Branched-chain amino acid transport system / permease component 7 265 4.9E-26 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Vc3S01_A0850 0f242b2ecb9caf90b039be6c4ef13a9e 436 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 4 103 7.5E-31 T 12-10-2018 IPR017508 HipA, N-terminal subdomain 1 Vc3S01_A0850 0f242b2ecb9caf90b039be6c4ef13a9e 436 Gene3D G3DSA:1.10.1070.20 264 429 2.6E-5 T 12-10-2018 Vc3S01_A0850 0f242b2ecb9caf90b039be6c4ef13a9e 436 Pfam PF07804 HipA-like C-terminal domain 150 403 5.3E-53 T 12-10-2018 IPR012893 HipA-like, C-terminal Vc3S01_A0850 0f242b2ecb9caf90b039be6c4ef13a9e 436 Pfam PF13657 HipA N-terminal domain 7 103 2.9E-23 T 12-10-2018 IPR017508 HipA, N-terminal subdomain 1 Vc3S01_A0127 8f0fcb3174adff5a0fc021d9d5bce98f 719 SUPERFAMILY SSF56300 79 461 1.92E-18 T 12-10-2018 Vc3S01_A0127 8f0fcb3174adff5a0fc021d9d5bce98f 719 Gene3D G3DSA:3.60.21.10 33 166 1.2E-8 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like Vc3S01_A0127 8f0fcb3174adff5a0fc021d9d5bce98f 719 Gene3D G3DSA:3.60.21.10 238 485 1.6E-29 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like Vc3S01_1765 0be840fd5251a8962aa8b90dc4979300 116 Pfam PF10973 Protein of unknown function (DUF2799) 29 103 2.9E-14 T 12-10-2018 IPR021242 Protein of unknown function DUF2799 Vc3S01_1185 95297397e406f5d590dfc4b4accc1ded 818 SUPERFAMILY SSF54631 692 816 6.19E-10 T 12-10-2018 Vc3S01_1185 95297397e406f5d590dfc4b4accc1ded 818 SMART SM00052 417 663 1.0E-59 T 12-10-2018 IPR001633 EAL domain Vc3S01_1185 95297397e406f5d590dfc4b4accc1ded 818 Gene3D G3DSA:3.10.580.10 688 816 5.2E-8 T 12-10-2018 Vc3S01_1185 95297397e406f5d590dfc4b4accc1ded 818 Pfam PF13426 PAS domain 139 239 7.6E-8 T 12-10-2018 IPR000014 PAS domain Vc3S01_1185 95297397e406f5d590dfc4b4accc1ded 818 SMART SM00091 128 194 1.8E-6 T 12-10-2018 IPR000014 PAS domain Vc3S01_1185 95297397e406f5d590dfc4b4accc1ded 818 Pfam PF00563 EAL domain 425 657 1.3E-65 T 12-10-2018 IPR001633 EAL domain Vc3S01_1185 95297397e406f5d590dfc4b4accc1ded 818 Gene3D G3DSA:3.20.20.450 416 667 7.1E-73 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_1185 95297397e406f5d590dfc4b4accc1ded 818 SUPERFAMILY SSF55785 126 239 5.58E-15 T 12-10-2018 IPR035965 PAS domain superfamily Vc3S01_1185 95297397e406f5d590dfc4b4accc1ded 818 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 128 240 1.4E-10 T 12-10-2018 IPR000014 PAS domain Vc3S01_1185 95297397e406f5d590dfc4b4accc1ded 818 SUPERFAMILY SSF141868 424 661 1.96E-67 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_1185 95297397e406f5d590dfc4b4accc1ded 818 Pfam PF00571 CBS domain 761 816 2.3E-4 T 12-10-2018 IPR000644 CBS domain Vc3S01_1185 95297397e406f5d590dfc4b4accc1ded 818 Gene3D G3DSA:3.30.450.20 119 239 7.4E-16 T 12-10-2018 Vc3S01_0423 e71ac539b8391b472ef394ecf220692e 263 Pfam PF02405 Permease MlaE 48 259 6.9E-74 T 12-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 Vc3S01_0423 e71ac539b8391b472ef394ecf220692e 263 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 9 261 4.9E-95 T 12-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria Vc3S01_A0455 7fc91ebaca078c182a7389100af43980 750 SUPERFAMILY SSF55486 174 486 4.6E-41 T 12-10-2018 Vc3S01_A0455 7fc91ebaca078c182a7389100af43980 750 Gene3D G3DSA:2.60.120.260 589 724 4.4E-13 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily Vc3S01_A0455 7fc91ebaca078c182a7389100af43980 750 SUPERFAMILY SSF49785 607 708 4.68E-17 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily Vc3S01_A0455 7fc91ebaca078c182a7389100af43980 750 Pfam PF01483 Proprotein convertase P-domain 621 705 4.0E-19 T 12-10-2018 IPR002884 P domain GO:0004252|GO:0006508 Vc3S01_1918 3410766192cb5f3a599305ef5a4424e1 784 SUPERFAMILY SSF52540 16 326 5.4E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_1918 3410766192cb5f3a599305ef5a4424e1 784 Gene3D G3DSA:1.20.120.1080 356 450 2.6E-7 T 12-10-2018 Vc3S01_1918 3410766192cb5f3a599305ef5a4424e1 784 SMART SM00847 372 460 0.003 T 12-10-2018 IPR007502 Helicase-associated domain GO:0004386 Vc3S01_1918 3410766192cb5f3a599305ef5a4424e1 784 Pfam PF00271 Helicase conserved C-terminal domain 198 314 2.7E-15 T 12-10-2018 IPR001650 Helicase, C-terminal Vc3S01_1918 3410766192cb5f3a599305ef5a4424e1 784 Gene3D G3DSA:3.40.50.300 168 331 6.3E-45 T 12-10-2018 Vc3S01_1918 3410766192cb5f3a599305ef5a4424e1 784 Gene3D G3DSA:3.40.50.300 1 167 5.5E-42 T 12-10-2018 Vc3S01_1918 3410766192cb5f3a599305ef5a4424e1 784 Pfam PF00270 DEAD/DEAH box helicase 13 152 2.8E-8 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Vc3S01_1918 3410766192cb5f3a599305ef5a4424e1 784 Pfam PF04408 Helicase associated domain (HA2) 373 445 5.4E-7 T 12-10-2018 IPR007502 Helicase-associated domain GO:0004386 Vc3S01_1918 3410766192cb5f3a599305ef5a4424e1 784 SMART SM00487 1 174 2.2E-14 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Vc3S01_1918 3410766192cb5f3a599305ef5a4424e1 784 SMART SM00490 219 315 8.8E-15 T 12-10-2018 IPR001650 Helicase, C-terminal Vc3S01_1088 10e6bdc4910cba49f02ef81597b3144f 193 Pfam PF02545 Maf-like protein 5 187 1.3E-44 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 Vc3S01_1088 10e6bdc4910cba49f02ef81597b3144f 193 Hamap MF_00528 Septum formation protein Maf [maf]. 5 192 29.531 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 Vc3S01_1088 10e6bdc4910cba49f02ef81597b3144f 193 PIRSF PIRSF006305 1 193 3.1E-44 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 Vc3S01_1088 10e6bdc4910cba49f02ef81597b3144f 193 TIGRFAM TIGR00172 maf: septum formation protein Maf 4 186 1.9E-53 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 Vc3S01_1088 10e6bdc4910cba49f02ef81597b3144f 193 Gene3D G3DSA:3.90.950.10 5 193 9.1E-59 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Vc3S01_1088 10e6bdc4910cba49f02ef81597b3144f 193 SUPERFAMILY SSF52972 1 187 1.57E-59 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Vc3S01_A0516 97fbc7a3e96b632db8e48a37c27efc20 292 SUPERFAMILY SSF48179 167 290 6.69E-39 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Vc3S01_A0516 97fbc7a3e96b632db8e48a37c27efc20 292 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 6 163 3.8E-48 T 12-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 Vc3S01_A0516 97fbc7a3e96b632db8e48a37c27efc20 292 Gene3D G3DSA:3.40.50.720 1 166 2.0E-50 T 12-10-2018 Vc3S01_A0516 97fbc7a3e96b632db8e48a37c27efc20 292 SUPERFAMILY SSF51735 4 166 1.78E-52 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_A0516 97fbc7a3e96b632db8e48a37c27efc20 292 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 168 287 1.3E-31 T 12-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 Vc3S01_A0516 97fbc7a3e96b632db8e48a37c27efc20 292 Gene3D G3DSA:1.10.1040.10 167 292 1.3E-37 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Vc3S01_A0516 97fbc7a3e96b632db8e48a37c27efc20 292 PIRSF PIRSF000103 1 292 4.1E-78 T 12-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 Vc3S01_2104 d4d2d7cce5af7512f9888b856987a5ba 318 Pfam PF03547 Membrane transport protein 165 307 1.8E-12 T 12-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 Vc3S01_A1799 d146735269080daf0b1438764d67ee75 313 Gene3D G3DSA:3.20.20.70 103 309 4.3E-56 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_A1799 d146735269080daf0b1438764d67ee75 313 Gene3D G3DSA:3.20.20.70 1 82 1.4E-13 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_A1799 d146735269080daf0b1438764d67ee75 313 Pfam PF04055 Radical SAM superfamily 20 251 4.4E-22 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Vc3S01_A1799 d146735269080daf0b1438764d67ee75 313 PIRSF PIRSF000371 1 313 6.0E-112 T 12-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 Vc3S01_A1799 d146735269080daf0b1438764d67ee75 313 ProSitePatterns PS01087 Radical activating enzymes signature. 13 34 - T 12-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 Vc3S01_A1799 d146735269080daf0b1438764d67ee75 313 Pfam PF13353 4Fe-4S single cluster domain 12 166 2.7E-11 T 12-10-2018 Vc3S01_A1799 d146735269080daf0b1438764d67ee75 313 SUPERFAMILY SSF102114 139 279 1.55E-15 T 12-10-2018 Vc3S01_A1799 d146735269080daf0b1438764d67ee75 313 TIGRFAM TIGR02494 PFLE_PFLC: glycyl-radical enzyme activating protein 3 302 6.7E-94 T 12-10-2018 Vc3S01_A0373 fa43815202869a8130ca538562754b7b 450 Gene3D G3DSA:3.40.50.12240 22 448 2.7E-151 T 12-10-2018 Vc3S01_A0373 fa43815202869a8130ca538562754b7b 450 SUPERFAMILY SSF52540 102 370 1.9E-95 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A0373 fa43815202869a8130ca538562754b7b 450 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 14 445 1.9E-164 T 12-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Vc3S01_A0373 fa43815202869a8130ca538562754b7b 450 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 154 365 1.5E-72 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Vc3S01_A0373 fa43815202869a8130ca538562754b7b 450 SMART SM00382 166 349 9.2E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_A0373 fa43815202869a8130ca538562754b7b 450 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 356 365 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Vc3S01_A0373 fa43815202869a8130ca538562754b7b 450 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 31 443 6.1E-189 T 12-10-2018 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Vc3S01_2714 76d88ae99d5bfd40e3d7ad15e0401576 382 Pfam PF02690 Na+/Pi-cotransporter 218 326 8.1E-19 T 12-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 Vc3S01_2714 76d88ae99d5bfd40e3d7ad15e0401576 382 Pfam PF02690 Na+/Pi-cotransporter 30 150 9.3E-23 T 12-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 Vc3S01_1888 070ac683e597a207494e9cfb26acddbf 117 SUPERFAMILY SSF74731 2 116 5.62E-50 T 12-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_1888 070ac683e597a207494e9cfb26acddbf 117 Gene3D G3DSA:1.10.1900.20 56 117 1.0E-28 T 12-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_1888 070ac683e597a207494e9cfb26acddbf 117 Gene3D G3DSA:1.10.720.90 2 55 1.1E-24 T 12-10-2018 Vc3S01_1888 070ac683e597a207494e9cfb26acddbf 117 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 30.596 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_1888 070ac683e597a207494e9cfb26acddbf 117 Pfam PF00453 Ribosomal protein L20 3 108 9.9E-49 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_1888 070ac683e597a207494e9cfb26acddbf 117 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_1888 070ac683e597a207494e9cfb26acddbf 117 PRINTS PR00062 Ribosomal protein L20 signature 42 71 4.8E-42 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_1888 070ac683e597a207494e9cfb26acddbf 117 PRINTS PR00062 Ribosomal protein L20 signature 12 41 4.8E-42 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_1888 070ac683e597a207494e9cfb26acddbf 117 PRINTS PR00062 Ribosomal protein L20 signature 75 101 4.8E-42 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_1888 070ac683e597a207494e9cfb26acddbf 117 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 2.5E-52 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_1888 070ac683e597a207494e9cfb26acddbf 117 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 2.0E-22 T 12-10-2018 Vc3S01_1323 77335e10c21fe3163b3ca0b35ee502a1 148 Pfam PF13673 Acetyltransferase (GNAT) domain 32 145 2.5E-25 T 12-10-2018 IPR000182 GNAT domain Vc3S01_1323 77335e10c21fe3163b3ca0b35ee502a1 148 SUPERFAMILY SSF55729 1 143 1.35E-21 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_1323 77335e10c21fe3163b3ca0b35ee502a1 148 Gene3D G3DSA:3.40.630.30 1 147 2.8E-20 T 12-10-2018 Vc3S01_A0132 f865e4e923628a99a98bc51eee6f2ad1 379 Pfam PF07690 Major Facilitator Superfamily 9 334 1.4E-15 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Vc3S01_A0132 f865e4e923628a99a98bc51eee6f2ad1 379 Gene3D G3DSA:1.20.1250.20 4 177 7.8E-12 T 12-10-2018 Vc3S01_A0132 f865e4e923628a99a98bc51eee6f2ad1 379 Gene3D G3DSA:1.20.1250.20 190 371 9.1E-10 T 12-10-2018 Vc3S01_A0132 f865e4e923628a99a98bc51eee6f2ad1 379 SUPERFAMILY SSF103473 20 368 2.62E-26 T 12-10-2018 IPR036259 MFS transporter superfamily Vc3S01_1467 aeef753765886117a0e5cd1ba4df43fa 230 Gene3D G3DSA:3.90.226.10 20 206 5.5E-6 T 12-10-2018 Vc3S01_1467 aeef753765886117a0e5cd1ba4df43fa 230 SUPERFAMILY SSF52096 27 121 1.29E-5 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Vc3S01_A0803 81cde9732cd5409383d23296a8149f5e 511 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 152 297 1.0E-10 T 12-10-2018 IPR000477 Reverse transcriptase domain Vc3S01_A0803 81cde9732cd5409383d23296a8149f5e 511 SUPERFAMILY SSF56672 247 336 8.63E-5 T 12-10-2018 Vc3S01_A1611 528036496441620f94648d80798c92d0 286 SUPERFAMILY SSF52833 38 130 4.73E-15 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Vc3S01_A1611 528036496441620f94648d80798c92d0 286 SUPERFAMILY SSF47616 116 258 9.63E-32 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Vc3S01_A1611 528036496441620f94648d80798c92d0 286 Gene3D G3DSA:3.40.30.10 17 254 1.9E-109 T 12-10-2018 Vc3S01_A1611 528036496441620f94648d80798c92d0 286 Pfam PF02798 Glutathione S-transferase, N-terminal domain 64 126 2.3E-6 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Vc3S01_A1611 528036496441620f94648d80798c92d0 286 Gene3D G3DSA:1.20.1050.10 132 248 1.9E-109 T 12-10-2018 Vc3S01_A1611 528036496441620f94648d80798c92d0 286 Pfam PF13410 Glutathione S-transferase, C-terminal domain 176 244 3.9E-9 T 12-10-2018 Vc3S01_2928 ce7a6130fe6694bc53b8dc869675ec10 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 12-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_2928 ce7a6130fe6694bc53b8dc869675ec10 130 SUPERFAMILY SSF56047 2 129 4.58E-44 T 12-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_2928 ce7a6130fe6694bc53b8dc869675ec10 130 Pfam PF00410 Ribosomal protein S8 5 129 5.3E-47 T 12-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_2928 ce7a6130fe6694bc53b8dc869675ec10 130 Gene3D G3DSA:3.30.1490.10 73 130 3.3E-25 T 12-10-2018 Vc3S01_2928 ce7a6130fe6694bc53b8dc869675ec10 130 Gene3D G3DSA:3.30.1370.30 2 72 6.5E-26 T 12-10-2018 Vc3S01_2928 ce7a6130fe6694bc53b8dc869675ec10 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 31.099 T 12-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_A1877 5116613530eee76249f0aa33d009cc19 289 Gene3D G3DSA:2.60.120.10 123 278 1.3E-41 T 12-10-2018 IPR014710 RmlC-like jelly roll fold Vc3S01_A1877 5116613530eee76249f0aa33d009cc19 289 Pfam PF04962 KduI/IolB family 14 273 1.6E-70 T 12-10-2018 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 Vc3S01_A1877 5116613530eee76249f0aa33d009cc19 289 Gene3D G3DSA:2.60.120.10 16 122 8.8E-13 T 12-10-2018 IPR014710 RmlC-like jelly roll fold Vc3S01_A1877 5116613530eee76249f0aa33d009cc19 289 SUPERFAMILY SSF51182 23 258 3.53E-36 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily Vc3S01_A1644 c7c6a3cc5c15574b86c56358cdbe241e 297 SUPERFAMILY SSF53850 90 293 3.62E-43 T 12-10-2018 Vc3S01_A1644 c7c6a3cc5c15574b86c56358cdbe241e 297 SUPERFAMILY SSF46785 4 111 1.65E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A1644 c7c6a3cc5c15574b86c56358cdbe241e 297 Gene3D G3DSA:1.10.10.10 3 88 1.0E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A1644 c7c6a3cc5c15574b86c56358cdbe241e 297 Pfam PF03466 LysR substrate binding domain 90 290 7.5E-39 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_A1644 c7c6a3cc5c15574b86c56358cdbe241e 297 Gene3D G3DSA:3.40.190.10 91 287 3.3E-57 T 12-10-2018 Vc3S01_A1644 c7c6a3cc5c15574b86c56358cdbe241e 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 4.4E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A1644 c7c6a3cc5c15574b86c56358cdbe241e 297 Gene3D G3DSA:3.40.190.10 163 262 3.3E-57 T 12-10-2018 Vc3S01_1619 49e40b4007ed89cd2ff9bcc5c151db83 306 Gene3D G3DSA:1.10.8.210 150 211 1.9E-9 T 12-10-2018 IPR037115 Sirohaem synthase, dimerisation domain superfamily GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Vc3S01_1619 49e40b4007ed89cd2ff9bcc5c151db83 306 Gene3D G3DSA:3.30.160.110 114 149 1.6E-14 T 12-10-2018 Vc3S01_1619 49e40b4007ed89cd2ff9bcc5c151db83 306 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 198 1.5E-62 T 12-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Vc3S01_1619 49e40b4007ed89cd2ff9bcc5c151db83 306 SUPERFAMILY SSF75615 115 199 2.75E-25 T 12-10-2018 Vc3S01_1619 49e40b4007ed89cd2ff9bcc5c151db83 306 SUPERFAMILY SSF51735 1 113 3.59E-26 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_1619 49e40b4007ed89cd2ff9bcc5c151db83 306 Pfam PF13241 Putative NAD(P)-binding 6 116 1.4E-31 T 12-10-2018 Vc3S01_1619 49e40b4007ed89cd2ff9bcc5c151db83 306 Pfam PF14824 Sirohaem biosynthesis protein central 120 146 2.0E-7 T 12-10-2018 IPR028281 Siroheme synthase, central domain KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Vc3S01_1619 49e40b4007ed89cd2ff9bcc5c151db83 306 Gene3D G3DSA:3.40.50.720 1 113 2.6E-35 T 12-10-2018 Vc3S01_1619 49e40b4007ed89cd2ff9bcc5c151db83 306 Pfam PF10414 Sirohaem synthase dimerisation region 151 204 1.2E-12 T 12-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Vc3S01_0974 1a62d684316d4f7ef7329bbe05d75701 282 SUPERFAMILY SSF81324 22 235 5.5E-53 T 12-10-2018 Vc3S01_0974 1a62d684316d4f7ef7329bbe05d75701 282 Pfam PF00520 Ion transport protein 24 235 4.1E-31 T 12-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 Vc3S01_0974 1a62d684316d4f7ef7329bbe05d75701 282 PRINTS PR00169 Potassium channel signature 84 104 6.9E-37 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 Vc3S01_0974 1a62d684316d4f7ef7329bbe05d75701 282 PRINTS PR00169 Potassium channel signature 178 200 6.9E-37 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 Vc3S01_0974 1a62d684316d4f7ef7329bbe05d75701 282 PRINTS PR00169 Potassium channel signature 16 44 6.9E-37 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 Vc3S01_0974 1a62d684316d4f7ef7329bbe05d75701 282 PRINTS PR00169 Potassium channel signature 120 146 6.9E-37 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 Vc3S01_0974 1a62d684316d4f7ef7329bbe05d75701 282 PRINTS PR00169 Potassium channel signature 149 172 6.9E-37 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 Vc3S01_0974 1a62d684316d4f7ef7329bbe05d75701 282 PRINTS PR00169 Potassium channel signature 207 233 6.9E-37 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 Vc3S01_0974 1a62d684316d4f7ef7329bbe05d75701 282 PRINTS PR00169 Potassium channel signature 58 81 6.9E-37 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 Vc3S01_0974 1a62d684316d4f7ef7329bbe05d75701 282 Gene3D G3DSA:1.10.287.70 23 237 2.2E-57 T 12-10-2018 Vc3S01_2803 42991371bda3d540ec7a8147257f1cbb 626 Pfam PF01751 Toprim domain 413 521 8.9E-12 T 12-10-2018 IPR006171 TOPRIM domain Vc3S01_2803 42991371bda3d540ec7a8147257f1cbb 626 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 2 626 46.995 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Vc3S01_2803 42991371bda3d540ec7a8147257f1cbb 626 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 3 623 0.0 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Vc3S01_2803 42991371bda3d540ec7a8147257f1cbb 626 Gene3D G3DSA:3.30.230.10 216 389 1.2E-57 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Vc3S01_2803 42991371bda3d540ec7a8147257f1cbb 626 SMART SM00387 27 173 3.6E-20 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_2803 42991371bda3d540ec7a8147257f1cbb 626 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 171 1.3E-16 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_2803 42991371bda3d540ec7a8147257f1cbb 626 Gene3D G3DSA:3.30.565.10 2 215 1.7E-75 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_2803 42991371bda3d540ec7a8147257f1cbb 626 SUPERFAMILY SSF56719 388 619 9.15E-80 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Vc3S01_2803 42991371bda3d540ec7a8147257f1cbb 626 SUPERFAMILY SSF55874 5 215 2.87E-66 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_2803 42991371bda3d540ec7a8147257f1cbb 626 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 556 618 6.7E-27 T 12-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Vc3S01_2803 42991371bda3d540ec7a8147257f1cbb 626 Gene3D G3DSA:3.40.50.670 390 621 5.7E-93 T 12-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Vc3S01_2803 42991371bda3d540ec7a8147257f1cbb 626 SUPERFAMILY SSF54211 217 382 3.79E-47 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Vc3S01_2803 42991371bda3d540ec7a8147257f1cbb 626 PRINTS PR01098 Topoisomerase IV subunit B signature 448 469 5.0E-124 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Vc3S01_2803 42991371bda3d540ec7a8147257f1cbb 626 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 5.0E-124 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Vc3S01_2803 42991371bda3d540ec7a8147257f1cbb 626 PRINTS PR01098 Topoisomerase IV subunit B signature 362 387 5.0E-124 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Vc3S01_2803 42991371bda3d540ec7a8147257f1cbb 626 PRINTS PR01098 Topoisomerase IV subunit B signature 338 361 5.0E-124 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Vc3S01_2803 42991371bda3d540ec7a8147257f1cbb 626 PRINTS PR01098 Topoisomerase IV subunit B signature 135 149 5.0E-124 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Vc3S01_2803 42991371bda3d540ec7a8147257f1cbb 626 PRINTS PR01098 Topoisomerase IV subunit B signature 26 39 5.0E-124 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Vc3S01_2803 42991371bda3d540ec7a8147257f1cbb 626 PRINTS PR01098 Topoisomerase IV subunit B signature 294 310 5.0E-124 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Vc3S01_2803 42991371bda3d540ec7a8147257f1cbb 626 PRINTS PR01098 Topoisomerase IV subunit B signature 311 326 5.0E-124 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Vc3S01_2803 42991371bda3d540ec7a8147257f1cbb 626 PRINTS PR01098 Topoisomerase IV subunit B signature 149 164 5.0E-124 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Vc3S01_2803 42991371bda3d540ec7a8147257f1cbb 626 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 5.0E-124 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Vc3S01_2803 42991371bda3d540ec7a8147257f1cbb 626 PRINTS PR01098 Topoisomerase IV subunit B signature 537 559 5.0E-124 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Vc3S01_2803 42991371bda3d540ec7a8147257f1cbb 626 PRINTS PR01098 Topoisomerase IV subunit B signature 469 481 5.0E-124 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Vc3S01_2803 42991371bda3d540ec7a8147257f1cbb 626 PRINTS PR01098 Topoisomerase IV subunit B signature 503 519 5.0E-124 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Vc3S01_2803 42991371bda3d540ec7a8147257f1cbb 626 PRINTS PR01098 Topoisomerase IV subunit B signature 238 261 5.0E-124 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Vc3S01_2803 42991371bda3d540ec7a8147257f1cbb 626 Pfam PF00204 DNA gyrase B 218 384 1.4E-42 T 12-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Vc3S01_2803 42991371bda3d540ec7a8147257f1cbb 626 SMART SM00433 34 622 3.6E-217 T 12-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Vc3S01_2803 42991371bda3d540ec7a8147257f1cbb 626 PRINTS PR00418 DNA topoisomerase II family signature 109 123 5.5E-58 T 12-10-2018 Vc3S01_2803 42991371bda3d540ec7a8147257f1cbb 626 PRINTS PR00418 DNA topoisomerase II family signature 414 428 5.5E-58 T 12-10-2018 Vc3S01_2803 42991371bda3d540ec7a8147257f1cbb 626 PRINTS PR00418 DNA topoisomerase II family signature 497 514 5.5E-58 T 12-10-2018 Vc3S01_2803 42991371bda3d540ec7a8147257f1cbb 626 PRINTS PR00418 DNA topoisomerase II family signature 560 576 5.5E-58 T 12-10-2018 Vc3S01_2803 42991371bda3d540ec7a8147257f1cbb 626 PRINTS PR00418 DNA topoisomerase II family signature 31 46 5.5E-58 T 12-10-2018 Vc3S01_2803 42991371bda3d540ec7a8147257f1cbb 626 PRINTS PR00418 DNA topoisomerase II family signature 479 495 5.5E-58 T 12-10-2018 Vc3S01_2803 42991371bda3d540ec7a8147257f1cbb 626 PRINTS PR00418 DNA topoisomerase II family signature 266 279 5.5E-58 T 12-10-2018 Vc3S01_2803 42991371bda3d540ec7a8147257f1cbb 626 PRINTS PR00418 DNA topoisomerase II family signature 517 529 5.5E-58 T 12-10-2018 Vc3S01_2803 42991371bda3d540ec7a8147257f1cbb 626 PRINTS PR00418 DNA topoisomerase II family signature 66 79 5.5E-58 T 12-10-2018 Vc3S01_A1102 d9cace8c37a7d04733df0c796c5a5fe6 189 Gene3D G3DSA:3.30.70.1070 89 180 3.8E-21 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Vc3S01_A1102 d9cace8c37a7d04733df0c796c5a5fe6 189 SUPERFAMILY SSF110997 99 160 9.55E-7 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Vc3S01_A1102 d9cace8c37a7d04733df0c796c5a5fe6 189 Pfam PF05036 Sporulation related domain 99 171 4.7E-12 T 12-10-2018 IPR007730 Sporulation-like domain GO:0042834 Vc3S01_0257 27ce3aece043f3fbdf31cbcabe036bd8 438 Pfam PF00709 Adenylosuccinate synthetase 5 430 3.4E-179 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Vc3S01_0257 27ce3aece043f3fbdf31cbcabe036bd8 438 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 431 9.5E-191 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Vc3S01_0257 27ce3aece043f3fbdf31cbcabe036bd8 438 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 12-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Vc3S01_0257 27ce3aece043f3fbdf31cbcabe036bd8 438 SMART SM00788 4 431 1.2E-301 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Vc3S01_0257 27ce3aece043f3fbdf31cbcabe036bd8 438 Gene3D G3DSA:3.90.170.10 267 438 9.7E-67 T 12-10-2018 Vc3S01_0257 27ce3aece043f3fbdf31cbcabe036bd8 438 SUPERFAMILY SSF52540 3 434 1.38E-178 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0257 27ce3aece043f3fbdf31cbcabe036bd8 438 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 438 217.416 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Vc3S01_0257 27ce3aece043f3fbdf31cbcabe036bd8 438 Gene3D G3DSA:1.10.300.10 102 201 4.4E-106 T 12-10-2018 Vc3S01_0257 27ce3aece043f3fbdf31cbcabe036bd8 438 Gene3D G3DSA:3.40.440.10 6 249 4.4E-106 T 12-10-2018 Vc3S01_0257 27ce3aece043f3fbdf31cbcabe036bd8 438 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 12-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Vc3S01_1473 2897ed2256fbc0d939de32210907041f 132 SUPERFAMILY SSF54593 1 128 3.22E-28 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Vc3S01_1473 2897ed2256fbc0d939de32210907041f 132 ProSitePatterns PS00934 Glyoxalase I signature 1. 7 28 - T 12-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 Vc3S01_1473 2897ed2256fbc0d939de32210907041f 132 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 109 2.3E-11 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Vc3S01_1473 2897ed2256fbc0d939de32210907041f 132 Gene3D G3DSA:3.10.180.10 1 132 5.2E-36 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Vc3S01_0270 a31046575b379877f48783d8dc93952d 339 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 338 1.8E-132 T 12-10-2018 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 Vc3S01_0270 a31046575b379877f48783d8dc93952d 339 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 338 9.5E-132 T 12-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 Vc3S01_0270 a31046575b379877f48783d8dc93952d 339 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 337 2.2E-136 T 12-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 Vc3S01_0270 a31046575b379877f48783d8dc93952d 339 SUPERFAMILY SSF55729 1 338 8.89E-129 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_0270 a31046575b379877f48783d8dc93952d 339 Gene3D G3DSA:3.40.630.30 1 274 5.1E-112 T 12-10-2018 Vc3S01_0270 a31046575b379877f48783d8dc93952d 339 Gene3D G3DSA:2.40.40.20 277 339 1.0E-5 T 12-10-2018 Vc3S01_0903 51b23be719efba80f85950b6ee70c31d 207 Pfam PF03458 UPF0126 domain 5 76 5.5E-19 T 12-10-2018 IPR005115 Uncharacterised domain UPF0126 Vc3S01_0903 51b23be719efba80f85950b6ee70c31d 207 Pfam PF03458 UPF0126 domain 92 163 1.8E-19 T 12-10-2018 IPR005115 Uncharacterised domain UPF0126 Vc3S01_p30026 ebb4c1ce97ae2330b637fa18e57ea213 322 Gene3D G3DSA:3.40.190.10 117 255 3.7E-104 T 12-10-2018 Vc3S01_p30026 ebb4c1ce97ae2330b637fa18e57ea213 322 Pfam PF16868 NMT1-like family 30 319 8.8E-91 T 12-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family Vc3S01_p30026 ebb4c1ce97ae2330b637fa18e57ea213 322 Gene3D G3DSA:3.40.190.10 30 319 3.7E-104 T 12-10-2018 Vc3S01_p30026 ebb4c1ce97ae2330b637fa18e57ea213 322 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 9 319 3.0E-108 T 12-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family Vc3S01_p30026 ebb4c1ce97ae2330b637fa18e57ea213 322 SUPERFAMILY SSF53850 25 321 6.65E-85 T 12-10-2018 Vc3S01_2522 ff7274735ab6f2123659fbb369837359 105 Pfam PF02410 Ribosomal silencing factor during starvation 11 104 4.3E-28 T 12-10-2018 Vc3S01_2522 ff7274735ab6f2123659fbb369837359 105 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 2 105 25.542 T 12-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS Vc3S01_2522 ff7274735ab6f2123659fbb369837359 105 SUPERFAMILY SSF81301 5 105 1.8E-38 T 12-10-2018 Vc3S01_2522 ff7274735ab6f2123659fbb369837359 105 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 104 3.9E-39 T 12-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS Vc3S01_2522 ff7274735ab6f2123659fbb369837359 105 Gene3D G3DSA:3.30.460.10 2 105 1.1E-37 T 12-10-2018 Vc3S01_1556 8ef8bc867f8a38503cbf633ebcd33be1 506 Gene3D G3DSA:3.40.309.10 270 501 6.1E-75 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Vc3S01_1556 8ef8bc867f8a38503cbf633ebcd33be1 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 Vc3S01_1556 8ef8bc867f8a38503cbf633ebcd33be1 506 Gene3D G3DSA:3.40.605.10 11 269 3.8E-89 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Vc3S01_1556 8ef8bc867f8a38503cbf633ebcd33be1 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 Vc3S01_1556 8ef8bc867f8a38503cbf633ebcd33be1 506 Pfam PF00171 Aldehyde dehydrogenase family 27 493 5.6E-167 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Vc3S01_1556 8ef8bc867f8a38503cbf633ebcd33be1 506 SUPERFAMILY SSF53720 13 497 3.27E-163 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Vc3S01_A0115 c969f19bdfa2c539016de841dbd86ddd 924 Gene3D G3DSA:3.20.20.300 488 800 1.2E-88 T 12-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 Vc3S01_A0115 c969f19bdfa2c539016de841dbd86ddd 924 SUPERFAMILY SSF51445 489 810 8.21E-78 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily Vc3S01_A0115 c969f19bdfa2c539016de841dbd86ddd 924 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 492 790 1.5E-60 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Vc3S01_A0115 c969f19bdfa2c539016de841dbd86ddd 924 PRINTS PR00133 Glycosyl hydrolase family 3 signature 636 652 1.1E-27 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Vc3S01_A0115 c969f19bdfa2c539016de841dbd86ddd 924 PRINTS PR00133 Glycosyl hydrolase family 3 signature 605 621 1.1E-27 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Vc3S01_A0115 c969f19bdfa2c539016de841dbd86ddd 924 PRINTS PR00133 Glycosyl hydrolase family 3 signature 559 578 1.1E-27 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Vc3S01_A0115 c969f19bdfa2c539016de841dbd86ddd 924 PRINTS PR00133 Glycosyl hydrolase family 3 signature 706 724 1.1E-27 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Vc3S01_A0115 c969f19bdfa2c539016de841dbd86ddd 924 PRINTS PR00133 Glycosyl hydrolase family 3 signature 533 549 1.1E-27 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Vc3S01_A0115 c969f19bdfa2c539016de841dbd86ddd 924 Gene3D G3DSA:3.40.50.1700 11 287 7.4E-73 T 12-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 Vc3S01_A0115 c969f19bdfa2c539016de841dbd86ddd 924 Pfam PF14310 Fibronectin type III-like domain 323 398 6.0E-19 T 12-10-2018 IPR026891 Fibronectin type III-like domain Vc3S01_A0115 c969f19bdfa2c539016de841dbd86ddd 924 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 706 723 - T 12-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 Vc3S01_A0115 c969f19bdfa2c539016de841dbd86ddd 924 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 25 285 7.9E-36 T 12-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 Vc3S01_A0115 c969f19bdfa2c539016de841dbd86ddd 924 Gene3D G3DSA:2.60.40.10 292 420 8.4E-25 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_A0115 c969f19bdfa2c539016de841dbd86ddd 924 SUPERFAMILY SSF52279 25 288 9.94E-31 T 12-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 Vc3S01_A0115 c969f19bdfa2c539016de841dbd86ddd 924 SMART SM01217 323 399 1.3E-22 T 12-10-2018 IPR026891 Fibronectin type III-like domain Vc3S01_0166 bee61ffee899bc3bc0f64c9c5ec751a2 260 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 101 129 4.5E-9 T 12-10-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 Vc3S01_0166 bee61ffee899bc3bc0f64c9c5ec751a2 260 Hamap MF_00297 NADH pyrophosphatase [nudC]. 3 259 41.765 T 12-10-2018 IPR022925 NADH pyrophosphatase NudC GO:0000210 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 Vc3S01_0166 bee61ffee899bc3bc0f64c9c5ec751a2 260 SUPERFAMILY SSF55811 62 248 2.1E-43 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Vc3S01_0166 bee61ffee899bc3bc0f64c9c5ec751a2 260 Gene3D G3DSA:3.90.79.20 3 130 2.0E-32 T 12-10-2018 Vc3S01_0166 bee61ffee899bc3bc0f64c9c5ec751a2 260 Pfam PF00293 NUDIX domain 137 238 4.8E-19 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Vc3S01_0166 bee61ffee899bc3bc0f64c9c5ec751a2 260 ProSitePatterns PS00893 Nudix box signature. 164 185 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Vc3S01_0166 bee61ffee899bc3bc0f64c9c5ec751a2 260 Gene3D G3DSA:3.90.79.10 131 259 6.2E-40 T 12-10-2018 Vc3S01_A1077 a0500592545accf999b756183034ec6d 261 Pfam PF01435 Peptidase family M48 70 245 8.9E-45 T 12-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 Vc3S01_A1077 a0500592545accf999b756183034ec6d 261 Gene3D G3DSA:3.30.2010.10 52 139 1.6E-7 T 12-10-2018 Vc3S01_A0240 9dc8b91f01b4b16a05568cec372907e2 678 SUPERFAMILY SSF63829 326 642 1.08E-6 T 12-10-2018 Vc3S01_A0240 9dc8b91f01b4b16a05568cec372907e2 678 Pfam PF05787 Bacterial protein of unknown function (DUF839) 74 641 1.2E-149 T 12-10-2018 IPR008557 Protein of unknown function DUF839 Vc3S01_2736 3983f8a98baba9f8e440aaa1a27759a9 478 Pfam PF01235 Sodium:alanine symporter family 48 453 2.0E-162 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Vc3S01_2736 3983f8a98baba9f8e440aaa1a27759a9 478 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 87 102 - T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Vc3S01_2736 3983f8a98baba9f8e440aaa1a27759a9 478 PRINTS PR00175 Sodium/alanine symporter signature 411 431 1.4E-56 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Vc3S01_2736 3983f8a98baba9f8e440aaa1a27759a9 478 PRINTS PR00175 Sodium/alanine symporter signature 303 321 1.4E-56 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Vc3S01_2736 3983f8a98baba9f8e440aaa1a27759a9 478 PRINTS PR00175 Sodium/alanine symporter signature 87 109 1.4E-56 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Vc3S01_2736 3983f8a98baba9f8e440aaa1a27759a9 478 PRINTS PR00175 Sodium/alanine symporter signature 350 372 1.4E-56 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Vc3S01_2736 3983f8a98baba9f8e440aaa1a27759a9 478 PRINTS PR00175 Sodium/alanine symporter signature 206 225 1.4E-56 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Vc3S01_2736 3983f8a98baba9f8e440aaa1a27759a9 478 PRINTS PR00175 Sodium/alanine symporter signature 178 196 1.4E-56 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Vc3S01_2736 3983f8a98baba9f8e440aaa1a27759a9 478 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 442 5.2E-162 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Vc3S01_1436 072e08fcf156d87a265073d785c50669 176 SMART SM00479 5 176 1.5E-5 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Vc3S01_1436 072e08fcf156d87a265073d785c50669 176 SUPERFAMILY SSF53098 4 175 6.16E-30 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Vc3S01_1436 072e08fcf156d87a265073d785c50669 176 Pfam PF00929 Exonuclease 7 171 4.3E-12 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Vc3S01_1436 072e08fcf156d87a265073d785c50669 176 Gene3D G3DSA:3.30.420.10 1 176 1.7E-38 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Vc3S01_0214 25b9fdc522fbdb0b4735ea425a3f474a 229 SMART SM00862 149 225 7.2E-21 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Vc3S01_0214 25b9fdc522fbdb0b4735ea425a3f474a 229 Gene3D G3DSA:3.40.50.2300 1 127 2.7E-37 T 12-10-2018 Vc3S01_0214 25b9fdc522fbdb0b4735ea425a3f474a 229 SUPERFAMILY SSF52172 1 125 1.17E-39 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_0214 25b9fdc522fbdb0b4735ea425a3f474a 229 Gene3D G3DSA:1.10.10.10 128 229 4.5E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_0214 25b9fdc522fbdb0b4735ea425a3f474a 229 SMART SM00448 2 111 5.0E-45 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_0214 25b9fdc522fbdb0b4735ea425a3f474a 229 SUPERFAMILY SSF46894 125 226 2.83E-24 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Vc3S01_0214 25b9fdc522fbdb0b4735ea425a3f474a 229 Pfam PF00072 Response regulator receiver domain 4 112 4.4E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_0214 25b9fdc522fbdb0b4735ea425a3f474a 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 225 1.1E-20 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Vc3S01_0465 9e4e21f62a25cb1bc736ff9ed71a879b 239 Gene3D G3DSA:3.40.50.150 29 239 7.8E-71 T 12-10-2018 Vc3S01_0465 9e4e21f62a25cb1bc736ff9ed71a879b 239 SUPERFAMILY SSF53335 15 237 1.01E-35 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Vc3S01_0465 9e4e21f62a25cb1bc736ff9ed71a879b 239 Pfam PF02390 Putative methyltransferase 62 232 4.8E-59 T 12-10-2018 Vc3S01_0465 9e4e21f62a25cb1bc736ff9ed71a879b 239 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 23 238 30.58 T 12-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 Vc3S01_0465 9e4e21f62a25cb1bc736ff9ed71a879b 239 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 47 238 1.6E-68 T 12-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 Vc3S01_1546 d8049a4c3cf90ba356107a16bdccd45b 539 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 421 536 1.8E-14 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_1546 d8049a4c3cf90ba356107a16bdccd45b 539 SUPERFAMILY SSF55874 419 534 1.83E-21 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_1546 d8049a4c3cf90ba356107a16bdccd45b 539 SMART SM00091 213 279 9.7E-5 T 12-10-2018 IPR000014 PAS domain Vc3S01_1546 d8049a4c3cf90ba356107a16bdccd45b 539 SUPERFAMILY SSF55890 322 390 1.44E-9 T 12-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 Vc3S01_1546 d8049a4c3cf90ba356107a16bdccd45b 539 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 320 372 7.4E-9 T 12-10-2018 IPR039506 SpoOB, alpha-helical domain Vc3S01_1546 d8049a4c3cf90ba356107a16bdccd45b 539 Pfam PF00989 PAS fold 215 277 5.4E-7 T 12-10-2018 IPR013767 PAS fold GO:0006355 Vc3S01_1546 d8049a4c3cf90ba356107a16bdccd45b 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 497 515 1.0E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_1546 d8049a4c3cf90ba356107a16bdccd45b 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 521 534 1.0E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_1546 d8049a4c3cf90ba356107a16bdccd45b 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 466 480 1.0E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_1546 d8049a4c3cf90ba356107a16bdccd45b 539 Gene3D G3DSA:3.30.450.20 199 310 2.5E-22 T 12-10-2018 Vc3S01_1546 d8049a4c3cf90ba356107a16bdccd45b 539 SUPERFAMILY SSF55785 215 306 2.44E-11 T 12-10-2018 IPR035965 PAS domain superfamily Vc3S01_1546 d8049a4c3cf90ba356107a16bdccd45b 539 SMART SM00387 418 537 4.4E-14 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_1546 d8049a4c3cf90ba356107a16bdccd45b 539 Gene3D G3DSA:3.30.450.20 35 164 2.2E-39 T 12-10-2018 Vc3S01_1546 d8049a4c3cf90ba356107a16bdccd45b 539 Pfam PF17203 Single cache domain 3 36 168 6.4E-19 T 12-10-2018 IPR033463 Single cache domain 3 Vc3S01_1546 d8049a4c3cf90ba356107a16bdccd45b 539 Gene3D G3DSA:3.30.565.10 382 539 2.6E-21 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_1546 d8049a4c3cf90ba356107a16bdccd45b 539 SUPERFAMILY SSF103190 40 169 2.63E-34 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Vc3S01_2912 ad5bcab4fce5d0c87843c1d9d0e04e7d 284 Pfam PF00892 EamA-like transporter family 6 137 5.5E-15 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Vc3S01_2912 ad5bcab4fce5d0c87843c1d9d0e04e7d 284 Pfam PF00892 EamA-like transporter family 143 268 1.2E-9 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Vc3S01_2912 ad5bcab4fce5d0c87843c1d9d0e04e7d 284 SUPERFAMILY SSF103481 178 271 1.03E-13 T 12-10-2018 Vc3S01_2912 ad5bcab4fce5d0c87843c1d9d0e04e7d 284 SUPERFAMILY SSF103481 43 141 3.27E-13 T 12-10-2018 Vc3S01_2371 8482a2510cc7396a6aa77aa403060b70 87 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 87 18.895 T 12-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 Vc3S01_2371 8482a2510cc7396a6aa77aa403060b70 87 SUPERFAMILY SSF55229 33 85 6.15E-17 T 12-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 Vc3S01_2371 8482a2510cc7396a6aa77aa403060b70 87 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 84 4.1E-34 T 12-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 Vc3S01_2371 8482a2510cc7396a6aa77aa403060b70 87 Gene3D G3DSA:3.30.1070.10 1 84 2.3E-26 T 12-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 Vc3S01_2371 8482a2510cc7396a6aa77aa403060b70 87 Pfam PF03776 Septum formation topological specificity factor MinE 14 83 9.9E-24 T 12-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 Vc3S01_3040 2fc896729c1888124dae9a732e99b3a4 430 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 323 428 4.5E-20 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_3040 2fc896729c1888124dae9a732e99b3a4 430 Gene3D G3DSA:1.10.287.130 167 277 1.7E-23 T 12-10-2018 Vc3S01_3040 2fc896729c1888124dae9a732e99b3a4 430 Pfam PF00512 His Kinase A (phospho-acceptor) domain 225 276 2.7E-9 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_3040 2fc896729c1888124dae9a732e99b3a4 430 SUPERFAMILY SSF47384 215 277 5.49E-12 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Vc3S01_3040 2fc896729c1888124dae9a732e99b3a4 430 Pfam PF00672 HAMP domain 169 217 6.3E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Vc3S01_3040 2fc896729c1888124dae9a732e99b3a4 430 SMART SM00304 169 221 4.6E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Vc3S01_3040 2fc896729c1888124dae9a732e99b3a4 430 SMART SM00387 321 430 1.6E-27 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_3040 2fc896729c1888124dae9a732e99b3a4 430 Gene3D G3DSA:3.30.565.10 284 430 4.9E-38 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_3040 2fc896729c1888124dae9a732e99b3a4 430 SUPERFAMILY SSF55874 285 429 5.11E-34 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_3040 2fc896729c1888124dae9a732e99b3a4 430 SMART SM00388 222 282 2.3E-9 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_3040 2fc896729c1888124dae9a732e99b3a4 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 409 3.0E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_3040 2fc896729c1888124dae9a732e99b3a4 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 358 372 3.0E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_3040 2fc896729c1888124dae9a732e99b3a4 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 386 3.0E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_A1100 e8856507e12ee72e3111fa1fbac3e811 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 1.4E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A1100 e8856507e12ee72e3111fa1fbac3e811 295 Gene3D G3DSA:3.40.190.10 136 276 4.0E-10 T 12-10-2018 Vc3S01_A1100 e8856507e12ee72e3111fa1fbac3e811 295 SUPERFAMILY SSF53850 115 289 1.99E-18 T 12-10-2018 Vc3S01_A1100 e8856507e12ee72e3111fa1fbac3e811 295 Gene3D G3DSA:1.10.10.10 5 90 1.8E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A1100 e8856507e12ee72e3111fa1fbac3e811 295 Pfam PF03466 LysR substrate binding domain 123 291 5.5E-14 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_A1100 e8856507e12ee72e3111fa1fbac3e811 295 Gene3D G3DSA:3.40.190.10 169 264 4.0E-10 T 12-10-2018 Vc3S01_A1100 e8856507e12ee72e3111fa1fbac3e811 295 SUPERFAMILY SSF46785 5 84 3.14E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_0429 473db14c92c9f1b3c67869f160dd53aa 241 SUPERFAMILY SSF69593 4 235 2.35E-56 T 12-10-2018 Vc3S01_0429 473db14c92c9f1b3c67869f160dd53aa 241 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 180 4.5E-43 T 12-10-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 Vc3S01_0429 473db14c92c9f1b3c67869f160dd53aa 241 SMART SM00563 67 182 6.1E-40 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Vc3S01_0429 473db14c92c9f1b3c67869f160dd53aa 241 Pfam PF01553 Acyltransferase 58 180 7.3E-31 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Vc3S01_A0947 2b4959cf62348b81e733ec69c27ac357 317 Pfam PF02885 Glycosyl transferase family, helical bundle domain 11 68 7.0E-11 T 12-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 Vc3S01_A0947 2b4959cf62348b81e733ec69c27ac357 317 SUPERFAMILY SSF52418 73 311 4.55E-43 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Vc3S01_A0947 2b4959cf62348b81e733ec69c27ac357 317 Gene3D G3DSA:3.40.1030.10 72 312 6.4E-42 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Vc3S01_A0947 2b4959cf62348b81e733ec69c27ac357 317 Pfam PF00591 Glycosyl transferase family, a/b domain 97 253 3.9E-5 T 12-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Vc3S01_A0947 2b4959cf62348b81e733ec69c27ac357 317 SUPERFAMILY SSF47648 8 72 6.41E-15 T 12-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Vc3S01_A0947 2b4959cf62348b81e733ec69c27ac357 317 Gene3D G3DSA:1.20.970.10 3 71 9.2E-16 T 12-10-2018 Vc3S01_0032 1826ab897ae54dea748a08efe5457ea0 805 PRINTS PR01159 DNA gyrase subunit B signature 243 261 1.3E-85 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Vc3S01_0032 1826ab897ae54dea748a08efe5457ea0 805 PRINTS PR01159 DNA gyrase subunit B signature 313 329 1.3E-85 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Vc3S01_0032 1826ab897ae54dea748a08efe5457ea0 805 PRINTS PR01159 DNA gyrase subunit B signature 220 242 1.3E-85 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Vc3S01_0032 1826ab897ae54dea748a08efe5457ea0 805 PRINTS PR01159 DNA gyrase subunit B signature 5 15 1.3E-85 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Vc3S01_0032 1826ab897ae54dea748a08efe5457ea0 805 PRINTS PR01159 DNA gyrase subunit B signature 180 195 1.3E-85 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Vc3S01_0032 1826ab897ae54dea748a08efe5457ea0 805 PRINTS PR01159 DNA gyrase subunit B signature 471 480 1.3E-85 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Vc3S01_0032 1826ab897ae54dea748a08efe5457ea0 805 PRINTS PR01159 DNA gyrase subunit B signature 758 770 1.3E-85 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Vc3S01_0032 1826ab897ae54dea748a08efe5457ea0 805 PRINTS PR01159 DNA gyrase subunit B signature 195 208 1.3E-85 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Vc3S01_0032 1826ab897ae54dea748a08efe5457ea0 805 PRINTS PR01159 DNA gyrase subunit B signature 774 790 1.3E-85 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Vc3S01_0032 1826ab897ae54dea748a08efe5457ea0 805 PRINTS PR01159 DNA gyrase subunit B signature 375 395 1.3E-85 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Vc3S01_0032 1826ab897ae54dea748a08efe5457ea0 805 PRINTS PR01159 DNA gyrase subunit B signature 361 375 1.3E-85 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Vc3S01_0032 1826ab897ae54dea748a08efe5457ea0 805 Gene3D G3DSA:3.40.50.670 399 572 3.5E-75 T 12-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Vc3S01_0032 1826ab897ae54dea748a08efe5457ea0 805 SUPERFAMILY SSF56719 395 796 6.8E-88 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Vc3S01_0032 1826ab897ae54dea748a08efe5457ea0 805 Pfam PF00204 DNA gyrase B 221 391 6.8E-60 T 12-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Vc3S01_0032 1826ab897ae54dea748a08efe5457ea0 805 Gene3D G3DSA:3.30.565.10 1 220 1.1E-94 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_0032 1826ab897ae54dea748a08efe5457ea0 805 SMART SM00433 35 798 4.1E-273 T 12-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Vc3S01_0032 1826ab897ae54dea748a08efe5457ea0 805 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 173 1.5E-22 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_0032 1826ab897ae54dea748a08efe5457ea0 805 Gene3D G3DSA:3.30.230.10 221 393 2.4E-72 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Vc3S01_0032 1826ab897ae54dea748a08efe5457ea0 805 ProSitePatterns PS00177 DNA topoisomerase II signature. 423 431 - T 12-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Vc3S01_0032 1826ab897ae54dea748a08efe5457ea0 805 SUPERFAMILY SSF54211 221 393 1.14E-58 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Vc3S01_0032 1826ab897ae54dea748a08efe5457ea0 805 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 5 805 0.0 T 12-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Vc3S01_0032 1826ab897ae54dea748a08efe5457ea0 805 Pfam PF01751 Toprim domain 420 532 8.5E-19 T 12-10-2018 IPR006171 TOPRIM domain Vc3S01_0032 1826ab897ae54dea748a08efe5457ea0 805 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 2 805 108.625 T 12-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Vc3S01_0032 1826ab897ae54dea748a08efe5457ea0 805 PRINTS PR00418 DNA topoisomerase II family signature 70 83 6.9E-71 T 12-10-2018 Vc3S01_0032 1826ab897ae54dea748a08efe5457ea0 805 PRINTS PR00418 DNA topoisomerase II family signature 526 538 6.9E-71 T 12-10-2018 Vc3S01_0032 1826ab897ae54dea748a08efe5457ea0 805 PRINTS PR00418 DNA topoisomerase II family signature 269 282 6.9E-71 T 12-10-2018 Vc3S01_0032 1826ab897ae54dea748a08efe5457ea0 805 PRINTS PR00418 DNA topoisomerase II family signature 35 50 6.9E-71 T 12-10-2018 Vc3S01_0032 1826ab897ae54dea748a08efe5457ea0 805 PRINTS PR00418 DNA topoisomerase II family signature 113 127 6.9E-71 T 12-10-2018 Vc3S01_0032 1826ab897ae54dea748a08efe5457ea0 805 PRINTS PR00418 DNA topoisomerase II family signature 737 753 6.9E-71 T 12-10-2018 Vc3S01_0032 1826ab897ae54dea748a08efe5457ea0 805 PRINTS PR00418 DNA topoisomerase II family signature 488 504 6.9E-71 T 12-10-2018 Vc3S01_0032 1826ab897ae54dea748a08efe5457ea0 805 PRINTS PR00418 DNA topoisomerase II family signature 506 523 6.9E-71 T 12-10-2018 Vc3S01_0032 1826ab897ae54dea748a08efe5457ea0 805 PRINTS PR00418 DNA topoisomerase II family signature 421 435 6.9E-71 T 12-10-2018 Vc3S01_0032 1826ab897ae54dea748a08efe5457ea0 805 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 734 794 2.6E-30 T 12-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Vc3S01_0032 1826ab897ae54dea748a08efe5457ea0 805 Gene3D G3DSA:3.40.50.670 706 804 2.5E-27 T 12-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Vc3S01_0032 1826ab897ae54dea748a08efe5457ea0 805 Gene3D G3DSA:3.10.20.690 593 684 9.9E-36 T 12-10-2018 Vc3S01_0032 1826ab897ae54dea748a08efe5457ea0 805 SUPERFAMILY SSF55874 4 211 8.25E-76 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_0032 1826ab897ae54dea748a08efe5457ea0 805 SMART SM00387 31 175 5.0E-29 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_0208 2e3eb661be664d7261c68114582afff8 435 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 434 3.7E-179 T 12-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 Vc3S01_0208 2e3eb661be664d7261c68114582afff8 435 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 367 4.4E-145 T 12-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 Vc3S01_0208 2e3eb661be664d7261c68114582afff8 435 PIRSF PIRSF004539 1 435 1.2E-175 T 12-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 Vc3S01_0542 b70fbc757f87f8d98563128f4043386e 597 SUPERFAMILY SSF89000 297 462 3.33E-50 T 12-10-2018 Vc3S01_0542 b70fbc757f87f8d98563128f4043386e 597 Pfam PF02436 Conserved carboxylase domain 292 494 2.1E-57 T 12-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 Vc3S01_0542 b70fbc757f87f8d98563128f4043386e 597 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 553 570 - T 12-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Vc3S01_0542 b70fbc757f87f8d98563128f4043386e 597 SUPERFAMILY SSF51230 519 596 5.23E-20 T 12-10-2018 IPR011053 Single hybrid motif Vc3S01_0542 b70fbc757f87f8d98563128f4043386e 597 Gene3D G3DSA:3.20.20.70 1 464 1.4E-172 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_0542 b70fbc757f87f8d98563128f4043386e 597 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 7 591 7.0E-267 T 12-10-2018 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 Vc3S01_0542 b70fbc757f87f8d98563128f4043386e 597 Gene3D G3DSA:2.40.50.100 523 597 1.4E-22 T 12-10-2018 Vc3S01_0542 b70fbc757f87f8d98563128f4043386e 597 SUPERFAMILY SSF51569 1 300 1.61E-90 T 12-10-2018 Vc3S01_0542 b70fbc757f87f8d98563128f4043386e 597 Pfam PF00364 Biotin-requiring enzyme 531 595 3.2E-16 T 12-10-2018 IPR000089 Biotin/lipoyl attachment Vc3S01_0542 b70fbc757f87f8d98563128f4043386e 597 Pfam PF00682 HMGL-like 6 270 2.3E-60 T 12-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 Vc3S01_A1366 c00795d58d51aa941c372b481531c2bd 78 ProDom PD058023 TRANSMEMBRANE SO1069 MEMBRANE VCA0743 SO4196 VVA0623 VPA0666 HI1736 PM0424 1 69 2.0E-32 T 12-10-2018 IPR020137 Uncharacterised protein family HI1736 Vc3S01_A1366 c00795d58d51aa941c372b481531c2bd 78 Gene3D G3DSA:1.20.1280.290 22 72 1.3E-6 T 12-10-2018 Vc3S01_A1366 c00795d58d51aa941c372b481531c2bd 78 Pfam PF10688 Bacterial inner membrane protein 2 69 6.8E-9 T 12-10-2018 IPR019629 Uncharacterised protein family HI1736/YgjV Vc3S01_0870 7982c5229886cf116a55850259161b32 295 Gene3D G3DSA:3.40.50.300 22 263 4.7E-59 T 12-10-2018 Vc3S01_0870 7982c5229886cf116a55850259161b32 295 SUPERFAMILY SSF52540 22 283 3.87E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0870 7982c5229886cf116a55850259161b32 295 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 22 261 1.7E-22 T 12-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 Vc3S01_0870 7982c5229886cf116a55850259161b32 295 PIRSF PIRSF003092 6 287 6.5E-86 T 12-10-2018 IPR025501 ATP binding protein MinD Vc3S01_3116 c5712eceaaab90be45d559f14022428d 685 SUPERFAMILY SSF55486 1 682 4.4E-209 T 12-10-2018 Vc3S01_3116 c5712eceaaab90be45d559f14022428d 685 Pfam PF01432 Peptidase family M3 222 682 7.9E-161 T 12-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 Vc3S01_3116 c5712eceaaab90be45d559f14022428d 685 Gene3D G3DSA:1.10.1370.10 140 615 7.8E-266 T 12-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 Vc3S01_3116 c5712eceaaab90be45d559f14022428d 685 Gene3D G3DSA:1.10.1370.40 13 680 7.8E-266 T 12-10-2018 Vc3S01_2124 540dbe406bf296da1481582ccf312961 376 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 49 116 7.6E-18 T 12-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 Vc3S01_2124 540dbe406bf296da1481582ccf312961 376 Gene3D G3DSA:2.180.10.10 36 115 6.1E-10 T 12-10-2018 Vc3S01_3043 fb6320d40b2fde100a6d982c117a2a46 627 SUPERFAMILY SSF50630 492 618 1.23E-32 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily Vc3S01_3043 fb6320d40b2fde100a6d982c117a2a46 627 SUPERFAMILY SSF50630 357 483 6.75E-11 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily Vc3S01_3043 fb6320d40b2fde100a6d982c117a2a46 627 SUPERFAMILY SSF50630 219 340 3.66E-17 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily Vc3S01_3043 fb6320d40b2fde100a6d982c117a2a46 627 Pfam PF05618 Putative ATP-dependant zinc protease 500 620 5.2E-25 T 12-10-2018 Vc3S01_3043 fb6320d40b2fde100a6d982c117a2a46 627 SUPERFAMILY SSF50630 42 211 1.33E-22 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily Vc3S01_3043 fb6320d40b2fde100a6d982c117a2a46 627 Gene3D G3DSA:2.40.70.10 216 333 2.1E-5 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily Vc3S01_3043 fb6320d40b2fde100a6d982c117a2a46 627 Gene3D G3DSA:2.40.70.10 115 203 1.9E-9 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily Vc3S01_3043 fb6320d40b2fde100a6d982c117a2a46 627 Gene3D G3DSA:2.40.70.10 490 612 5.9E-33 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily Vc3S01_0576 ac920131963e155955e1e0aa9f1cd281 256 PIRSF PIRSF006648 7 253 4.2E-25 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Vc3S01_0576 ac920131963e155955e1e0aa9f1cd281 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 58 80 8.4E-9 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Vc3S01_0576 ac920131963e155955e1e0aa9f1cd281 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 102 127 8.4E-9 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Vc3S01_0576 ac920131963e155955e1e0aa9f1cd281 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 176 195 8.4E-9 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Vc3S01_0576 ac920131963e155955e1e0aa9f1cd281 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 196 215 8.4E-9 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Vc3S01_0576 ac920131963e155955e1e0aa9f1cd281 256 Pfam PF01061 ABC-2 type transporter 8 218 2.6E-40 T 12-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 Vc3S01_3080 fcc4a6e422e3d229b11cba4e09f933c3 463 Gene3D G3DSA:1.10.10.920 370 463 5.0E-35 T 12-10-2018 Vc3S01_3080 fcc4a6e422e3d229b11cba4e09f933c3 463 Pfam PF04055 Radical SAM superfamily 63 234 2.3E-18 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Vc3S01_3080 fcc4a6e422e3d229b11cba4e09f933c3 463 Gene3D G3DSA:3.80.30.20 7 369 2.4E-138 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Vc3S01_3080 fcc4a6e422e3d229b11cba4e09f933c3 463 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 14 463 7.4E-209 T 12-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 Vc3S01_3080 fcc4a6e422e3d229b11cba4e09f933c3 463 PIRSF PIRSF000167 9 460 6.9E-175 T 12-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 Vc3S01_3080 fcc4a6e422e3d229b11cba4e09f933c3 463 SUPERFAMILY SSF102114 12 450 3.79E-146 T 12-10-2018 Vc3S01_3080 fcc4a6e422e3d229b11cba4e09f933c3 463 SMART SM00729 58 278 3.1E-54 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Vc3S01_3080 fcc4a6e422e3d229b11cba4e09f933c3 463 Pfam PF06969 HemN C-terminal domain 369 437 2.2E-12 T 12-10-2018 IPR010723 HemN, C-terminal Vc3S01_0213 05c41e247d9be458faad2dd0f5440a58 467 Gene3D G3DSA:3.30.565.10 313 463 4.4E-34 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_0213 05c41e247d9be458faad2dd0f5440a58 467 SMART SM00388 248 310 6.2E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_0213 05c41e247d9be458faad2dd0f5440a58 467 SMART SM00304 194 247 8.0E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Vc3S01_0213 05c41e247d9be458faad2dd0f5440a58 467 Pfam PF00672 HAMP domain 195 242 1.1E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Vc3S01_0213 05c41e247d9be458faad2dd0f5440a58 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 403 1.0E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_0213 05c41e247d9be458faad2dd0f5440a58 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 417 1.0E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_0213 05c41e247d9be458faad2dd0f5440a58 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 442 1.0E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_0213 05c41e247d9be458faad2dd0f5440a58 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 448 461 1.0E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_0213 05c41e247d9be458faad2dd0f5440a58 467 Pfam PF16527 Two-component sensor protein CpxA, periplasmic domain 41 172 7.8E-57 T 12-10-2018 IPR032404 Two-component sensor protein CpxA, periplasmic domain Vc3S01_0213 05c41e247d9be458faad2dd0f5440a58 467 SUPERFAMILY SSF55874 300 462 4.98E-33 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_0213 05c41e247d9be458faad2dd0f5440a58 467 SMART SM00387 354 464 1.9E-27 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_0213 05c41e247d9be458faad2dd0f5440a58 467 Gene3D G3DSA:1.10.287.130 198 311 1.4E-33 T 12-10-2018 Vc3S01_0213 05c41e247d9be458faad2dd0f5440a58 467 Pfam PF00512 His Kinase A (phospho-acceptor) domain 250 308 8.7E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_0213 05c41e247d9be458faad2dd0f5440a58 467 SUPERFAMILY SSF47384 234 309 3.14E-13 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Vc3S01_0213 05c41e247d9be458faad2dd0f5440a58 467 Gene3D G3DSA:3.30.450.210 36 161 1.4E-54 T 12-10-2018 IPR038515 CpxA, periplasmic domain superfamily Vc3S01_0213 05c41e247d9be458faad2dd0f5440a58 467 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 355 462 1.1E-17 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_A0574 4392459e7aa583566f8b001a2485c490 352 SUPERFAMILY SSF56235 28 320 3.01E-57 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Vc3S01_A0574 4392459e7aa583566f8b001a2485c490 352 Pfam PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family 28 316 4.4E-39 T 12-10-2018 IPR029132 Choloylglycine hydrolase/NAAA C-terminal Vc3S01_A0574 4392459e7aa583566f8b001a2485c490 352 Gene3D G3DSA:3.60.60.10 25 342 4.0E-73 T 12-10-2018 Vc3S01_0110 677856da2df83b1930b3b2e69c41d310 393 Pfam PF07690 Major Facilitator Superfamily 17 327 5.0E-20 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Vc3S01_0110 677856da2df83b1930b3b2e69c41d310 393 Gene3D G3DSA:1.20.1250.20 1 189 5.4E-14 T 12-10-2018 Vc3S01_0110 677856da2df83b1930b3b2e69c41d310 393 Gene3D G3DSA:1.20.1250.20 195 391 2.1E-11 T 12-10-2018 Vc3S01_0110 677856da2df83b1930b3b2e69c41d310 393 SUPERFAMILY SSF103473 3 387 1.23E-31 T 12-10-2018 IPR036259 MFS transporter superfamily Vc3S01_2473 98c05ec5285ee546df5d8fabea6ec10f 137 Pfam PF00460 Flagella basal body rod protein 7 32 1.8E-7 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Vc3S01_2473 98c05ec5285ee546df5d8fabea6ec10f 137 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 137 3.5E-51 T 12-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 Vc3S01_2473 98c05ec5285ee546df5d8fabea6ec10f 137 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site Vc3S01_2473 98c05ec5285ee546df5d8fabea6ec10f 137 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 91 135 2.9E-12 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Vc3S01_A0353 4e33b846938cb276383fde3e05bfa000 350 Gene3D G3DSA:3.30.750.140 207 324 2.7E-22 T 12-10-2018 IPR038610 FliK-like, C-terminal domain superfamily Vc3S01_A0353 4e33b846938cb276383fde3e05bfa000 350 Pfam PF02120 Flagellar hook-length control protein FliK 231 312 2.3E-20 T 12-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal Vc3S01_2658 92e05060c959c3a38dea8f6a7e2297ab 247 Pfam PF03932 CutC family 4 205 1.2E-84 T 12-10-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 Vc3S01_2658 92e05060c959c3a38dea8f6a7e2297ab 247 Gene3D G3DSA:3.20.20.380 3 247 5.7E-90 T 12-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 Vc3S01_2658 92e05060c959c3a38dea8f6a7e2297ab 247 SUPERFAMILY SSF110395 4 247 8.37E-78 T 12-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 Vc3S01_2658 92e05060c959c3a38dea8f6a7e2297ab 247 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 3 207 31.421 T 12-10-2018 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 Vc3S01_3172 703e3e5cbfed6bdc5649113d1b7b6729 369 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 77 288 5.0E-76 T 12-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 Vc3S01_3172 703e3e5cbfed6bdc5649113d1b7b6729 369 Pfam PF02481 DNA recombination-mediator protein A 77 280 8.6E-76 T 12-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 Vc3S01_3172 703e3e5cbfed6bdc5649113d1b7b6729 369 Gene3D G3DSA:1.10.10.10 305 364 8.9E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_3172 703e3e5cbfed6bdc5649113d1b7b6729 369 Gene3D G3DSA:3.40.50.450 1 293 5.0E-94 T 12-10-2018 Vc3S01_3172 703e3e5cbfed6bdc5649113d1b7b6729 369 SUPERFAMILY SSF102405 83 290 7.33E-42 T 12-10-2018 Vc3S01_1779 c03b64240e812508e36dceae6a4766ec 234 ProDom PD115044 PRECURSOR SIGNAL 3'REGION PLASMID CS5 11 202 2.0E-35 T 12-10-2018 Vc3S01_2530 16e3da29204830dd921187751c1853b1 321 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 26 73 1.7E-8 T 12-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Vc3S01_2530 16e3da29204830dd921187751c1853b1 321 PIRSF PIRSF005963 1 321 8.8E-129 T 12-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Vc3S01_2530 16e3da29204830dd921187751c1853b1 321 Gene3D G3DSA:3.20.20.70 48 293 6.2E-23 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_2530 16e3da29204830dd921187751c1853b1 321 TIGRFAM TIGR00510 lipA: lipoyl synthase 21 319 8.7E-148 T 12-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Vc3S01_2530 16e3da29204830dd921187751c1853b1 321 SUPERFAMILY SSF102114 52 315 1.29E-67 T 12-10-2018 Vc3S01_2530 16e3da29204830dd921187751c1853b1 321 Hamap MF_00206 Lipoyl synthase [lipA]. 1 321 154.128 T 12-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Vc3S01_2530 16e3da29204830dd921187751c1853b1 321 Pfam PF04055 Radical SAM superfamily 91 252 1.3E-18 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Vc3S01_2530 16e3da29204830dd921187751c1853b1 321 SMART SM00729 84 293 7.2E-19 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Vc3S01_0957 29a61b6030904dda0daf4b076ff3e2a1 182 PIRSF PIRSF000232 1 182 6.4E-64 T 12-10-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like Vc3S01_0957 29a61b6030904dda0daf4b076ff3e2a1 182 Gene3D G3DSA:3.40.109.10 1 182 1.3E-42 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Vc3S01_0957 29a61b6030904dda0daf4b076ff3e2a1 182 Pfam PF00881 Nitroreductase family 8 161 3.2E-23 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Vc3S01_0957 29a61b6030904dda0daf4b076ff3e2a1 182 SUPERFAMILY SSF55469 1 181 3.53E-42 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Vc3S01_A0028 19a1188939acba85c1db455f185f21df 132 Pfam PF04134 Protein of unknown function, DUF393 10 116 5.9E-26 T 12-10-2018 IPR007263 Protein of unknown function DUF393 Vc3S01_A0028 19a1188939acba85c1db455f185f21df 132 SUPERFAMILY SSF52833 3 43 8.05E-5 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Vc3S01_A0330 792515b9dbbef89e99f639e685ee0bb7 597 Gene3D G3DSA:3.40.50.720 397 509 5.4E-10 T 12-10-2018 Vc3S01_A0330 792515b9dbbef89e99f639e685ee0bb7 597 Gene3D G3DSA:1.20.1530.20 6 389 6.1E-12 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily Vc3S01_A0330 792515b9dbbef89e99f639e685ee0bb7 597 Pfam PF02254 TrkA-N domain 399 490 1.3E-7 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Vc3S01_A0330 792515b9dbbef89e99f639e685ee0bb7 597 SUPERFAMILY SSF51735 399 499 2.81E-8 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_A0330 792515b9dbbef89e99f639e685ee0bb7 597 Pfam PF00999 Sodium/hydrogen exchanger family 16 387 1.9E-31 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 Vc3S01_2209 6f6b31e6ab030cc195c94d0556261d44 496 Pfam PF00171 Aldehyde dehydrogenase family 20 456 4.8E-85 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Vc3S01_2209 6f6b31e6ab030cc195c94d0556261d44 496 Gene3D G3DSA:3.40.605.10 37 456 8.4E-146 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Vc3S01_2209 6f6b31e6ab030cc195c94d0556261d44 496 PIRSF PIRSF036492 11 494 4.2E-152 T 12-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 Vc3S01_2209 6f6b31e6ab030cc195c94d0556261d44 496 SUPERFAMILY SSF53720 22 481 1.96E-113 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Vc3S01_2209 6f6b31e6ab030cc195c94d0556261d44 496 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 234 241 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 Vc3S01_2209 6f6b31e6ab030cc195c94d0556261d44 496 Gene3D G3DSA:3.40.309.10 238 436 8.4E-146 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Vc3S01_2751 395f3f814e9600f5e72cb99d338eabfd 786 SMART SM00091 155 221 2.6E-7 T 12-10-2018 IPR000014 PAS domain Vc3S01_2751 395f3f814e9600f5e72cb99d338eabfd 786 Pfam PF00512 His Kinase A (phospho-acceptor) domain 283 345 2.0E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_2751 395f3f814e9600f5e72cb99d338eabfd 786 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 507 6.2E-27 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_2751 395f3f814e9600f5e72cb99d338eabfd 786 SUPERFAMILY SSF55785 140 267 1.06E-25 T 12-10-2018 IPR035965 PAS domain superfamily Vc3S01_2751 395f3f814e9600f5e72cb99d338eabfd 786 SUPERFAMILY SSF55874 336 506 2.1E-39 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_2751 395f3f814e9600f5e72cb99d338eabfd 786 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 507 4.8E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_2751 395f3f814e9600f5e72cb99d338eabfd 786 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 448 4.8E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_2751 395f3f814e9600f5e72cb99d338eabfd 786 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 462 4.8E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_2751 395f3f814e9600f5e72cb99d338eabfd 786 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 488 4.8E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_2751 395f3f814e9600f5e72cb99d338eabfd 786 SUPERFAMILY SSF47384 270 347 2.94E-16 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Vc3S01_2751 395f3f814e9600f5e72cb99d338eabfd 786 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 152 276 2.9E-18 T 12-10-2018 IPR000014 PAS domain Vc3S01_2751 395f3f814e9600f5e72cb99d338eabfd 786 Gene3D G3DSA:1.10.287.130 268 345 1.1E-21 T 12-10-2018 Vc3S01_2751 395f3f814e9600f5e72cb99d338eabfd 786 SMART SM00448 527 638 3.0E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_2751 395f3f814e9600f5e72cb99d338eabfd 786 SUPERFAMILY SSF52172 527 649 1.99E-25 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_2751 395f3f814e9600f5e72cb99d338eabfd 786 SMART SM00073 676 782 6.4E-10 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Vc3S01_2751 395f3f814e9600f5e72cb99d338eabfd 786 Gene3D G3DSA:1.10.287.970 1 89 2.1E-38 T 12-10-2018 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily Vc3S01_2751 395f3f814e9600f5e72cb99d338eabfd 786 Gene3D G3DSA:3.30.450.20 150 267 7.8E-23 T 12-10-2018 Vc3S01_2751 395f3f814e9600f5e72cb99d338eabfd 786 SMART SM00388 282 347 2.7E-16 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_2751 395f3f814e9600f5e72cb99d338eabfd 786 SMART SM00387 394 510 4.6E-33 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_2751 395f3f814e9600f5e72cb99d338eabfd 786 Gene3D G3DSA:1.20.120.160 670 786 1.2E-27 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 Vc3S01_2751 395f3f814e9600f5e72cb99d338eabfd 786 Pfam PF01627 Hpt domain 697 768 1.1E-11 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Vc3S01_2751 395f3f814e9600f5e72cb99d338eabfd 786 PIRSF PIRSF003182 1 786 0.0 T 12-10-2018 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 Vc3S01_2751 395f3f814e9600f5e72cb99d338eabfd 786 Gene3D G3DSA:3.40.50.2300 523 647 3.9E-27 T 12-10-2018 Vc3S01_2751 395f3f814e9600f5e72cb99d338eabfd 786 Gene3D G3DSA:3.30.565.10 348 512 4.0E-43 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_2751 395f3f814e9600f5e72cb99d338eabfd 786 SUPERFAMILY SSF47226 670 784 4.19E-29 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 Vc3S01_2751 395f3f814e9600f5e72cb99d338eabfd 786 Pfam PF00072 Response regulator receiver domain 529 638 3.8E-18 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_2751 395f3f814e9600f5e72cb99d338eabfd 786 Pfam PF08448 PAS fold 162 271 1.6E-18 T 12-10-2018 IPR013656 PAS fold-4 Vc3S01_1876 778ec40a95840767dd8243e3b53ea0fc 374 Gene3D G3DSA:3.30.70.270 191 365 2.5E-50 T 12-10-2018 Vc3S01_1876 778ec40a95840767dd8243e3b53ea0fc 374 ProSitePatterns PS00550 Hemerythrin family signature. 59 84 - T 12-10-2018 IPR016131 Haemerythrin, iron-binding site GO:0046872 Vc3S01_1876 778ec40a95840767dd8243e3b53ea0fc 374 Pfam PF00990 Diguanylate cyclase, GGDEF domain 207 363 1.1E-41 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_1876 778ec40a95840767dd8243e3b53ea0fc 374 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 5 131 7.8E-32 T 12-10-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 Vc3S01_1876 778ec40a95840767dd8243e3b53ea0fc 374 SMART SM00267 195 367 2.8E-46 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_1876 778ec40a95840767dd8243e3b53ea0fc 374 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 202 366 2.8E-45 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_1876 778ec40a95840767dd8243e3b53ea0fc 374 SUPERFAMILY SSF47188 3 131 5.62E-27 T 12-10-2018 IPR035938 Hemerythrin-like superfamily Vc3S01_1876 778ec40a95840767dd8243e3b53ea0fc 374 Gene3D G3DSA:1.20.120.50 2 135 2.3E-28 T 12-10-2018 IPR035938 Hemerythrin-like superfamily Vc3S01_1876 778ec40a95840767dd8243e3b53ea0fc 374 SUPERFAMILY SSF55073 211 366 1.65E-43 T 12-10-2018 IPR029787 Nucleotide cyclase Vc3S01_1876 778ec40a95840767dd8243e3b53ea0fc 374 Pfam PF01814 Hemerythrin HHE cation binding domain 13 127 9.4E-9 T 12-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 Vc3S01_2752 cfca620f99bac1e6c14a2b4fe0c6fb22 581 Gene3D G3DSA:3.30.450.20 264 407 2.4E-22 T 12-10-2018 Vc3S01_2752 cfca620f99bac1e6c14a2b4fe0c6fb22 581 Gene3D G3DSA:3.30.70.270 414 580 7.3E-51 T 12-10-2018 Vc3S01_2752 cfca620f99bac1e6c14a2b4fe0c6fb22 581 SMART SM00267 401 577 2.7E-61 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_2752 cfca620f99bac1e6c14a2b4fe0c6fb22 581 Pfam PF13188 PAS domain 40 78 0.088 T 12-10-2018 IPR000014 PAS domain Vc3S01_2752 cfca620f99bac1e6c14a2b4fe0c6fb22 581 Pfam PF08448 PAS fold 285 395 3.4E-13 T 12-10-2018 IPR013656 PAS fold-4 Vc3S01_2752 cfca620f99bac1e6c14a2b4fe0c6fb22 581 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 408 576 1.8E-49 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_2752 cfca620f99bac1e6c14a2b4fe0c6fb22 581 SUPERFAMILY SSF55785 266 392 9.42E-18 T 12-10-2018 IPR035965 PAS domain superfamily Vc3S01_2752 cfca620f99bac1e6c14a2b4fe0c6fb22 581 SUPERFAMILY SSF55073 417 577 7.85E-46 T 12-10-2018 IPR029787 Nucleotide cyclase Vc3S01_2752 cfca620f99bac1e6c14a2b4fe0c6fb22 581 SUPERFAMILY SSF55785 169 261 7.85E-5 T 12-10-2018 IPR035965 PAS domain superfamily Vc3S01_2752 cfca620f99bac1e6c14a2b4fe0c6fb22 581 Pfam PF00990 Diguanylate cyclase, GGDEF domain 413 572 5.8E-48 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_2752 cfca620f99bac1e6c14a2b4fe0c6fb22 581 SMART SM00091 279 346 0.0042 T 12-10-2018 IPR000014 PAS domain Vc3S01_2752 cfca620f99bac1e6c14a2b4fe0c6fb22 581 SMART SM00091 158 223 230.0 T 12-10-2018 IPR000014 PAS domain Vc3S01_2752 cfca620f99bac1e6c14a2b4fe0c6fb22 581 SMART SM00091 38 104 22.0 T 12-10-2018 IPR000014 PAS domain Vc3S01_2752 cfca620f99bac1e6c14a2b4fe0c6fb22 581 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 276 401 7.4E-13 T 12-10-2018 IPR000014 PAS domain Vc3S01_2752 cfca620f99bac1e6c14a2b4fe0c6fb22 581 Gene3D G3DSA:3.30.450.20 141 259 7.5E-6 T 12-10-2018 Vc3S01_A1358 da4161c6107a0ab57b8cd41e20582c72 283 Gene3D G3DSA:3.40.50.2300 1 251 3.4E-102 T 12-10-2018 Vc3S01_A1358 da4161c6107a0ab57b8cd41e20582c72 283 Gene3D G3DSA:3.40.50.2300 89 275 3.4E-102 T 12-10-2018 Vc3S01_A1358 da4161c6107a0ab57b8cd41e20582c72 283 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 3 251 1.7E-23 T 12-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain Vc3S01_A1358 da4161c6107a0ab57b8cd41e20582c72 283 TIGRFAM TIGR02955 TMAO_TorT: TMAO reductase system periplasmic protein TorT 1 279 6.6E-116 T 12-10-2018 IPR014301 TMAO reductase system, periplasmic protein TorT Vc3S01_A1358 da4161c6107a0ab57b8cd41e20582c72 283 SUPERFAMILY SSF53822 2 245 1.49E-33 T 12-10-2018 IPR028082 Periplasmic binding protein-like I Vc3S01_2811 dbce88f653d894ebfbb23c3aa0b8bddb 418 Gene3D G3DSA:1.10.287.950 89 418 8.7E-69 T 12-10-2018 Vc3S01_2811 dbce88f653d894ebfbb23c3aa0b8bddb 418 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 202 384 6.1E-43 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Vc3S01_2811 dbce88f653d894ebfbb23c3aa0b8bddb 418 SMART SM00283 156 417 7.1E-69 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Vc3S01_2811 dbce88f653d894ebfbb23c3aa0b8bddb 418 SUPERFAMILY SSF58104 109 418 5.49E-76 T 12-10-2018 Vc3S01_2811 dbce88f653d894ebfbb23c3aa0b8bddb 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 254 281 3.2E-23 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Vc3S01_2811 dbce88f653d894ebfbb23c3aa0b8bddb 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 283 312 3.2E-23 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Vc3S01_2811 dbce88f653d894ebfbb23c3aa0b8bddb 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 68 88 3.2E-23 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Vc3S01_A0185 55161412d2b063a680fbcee026bd5a6a 243 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 174 0.0013 T 12-10-2018 Vc3S01_A0185 55161412d2b063a680fbcee026bd5a6a 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 6.3E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A0185 55161412d2b063a680fbcee026bd5a6a 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 6.3E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A0185 55161412d2b063a680fbcee026bd5a6a 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 6.3E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A0185 55161412d2b063a680fbcee026bd5a6a 243 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 242 1.0E-61 T 12-10-2018 Vc3S01_A0185 55161412d2b063a680fbcee026bd5a6a 243 SUPERFAMILY SSF51735 3 242 2.78E-78 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_A0185 55161412d2b063a680fbcee026bd5a6a 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 4.0E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A0185 55161412d2b063a680fbcee026bd5a6a 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 4.0E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A0185 55161412d2b063a680fbcee026bd5a6a 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 4.0E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A0185 55161412d2b063a680fbcee026bd5a6a 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 4.0E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A0185 55161412d2b063a680fbcee026bd5a6a 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 4.0E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A0185 55161412d2b063a680fbcee026bd5a6a 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 4.0E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A0185 55161412d2b063a680fbcee026bd5a6a 243 Gene3D G3DSA:3.40.50.720 1 243 7.9E-79 T 12-10-2018 Vc3S01_A0185 55161412d2b063a680fbcee026bd5a6a 243 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Vc3S01_A0475 19e23ff2f0df99ad5d9d9a60e9ce9466 222 Pfam PF00196 Bacterial regulatory proteins, luxR family 156 211 1.4E-20 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_A0475 19e23ff2f0df99ad5d9d9a60e9ce9466 222 SMART SM00421 154 211 2.3E-24 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_A0475 19e23ff2f0df99ad5d9d9a60e9ce9466 222 Gene3D G3DSA:3.40.50.2300 7 146 8.1E-37 T 12-10-2018 Vc3S01_A0475 19e23ff2f0df99ad5d9d9a60e9ce9466 222 ProSitePatterns PS00622 LuxR-type HTH domain signature. 171 198 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_A0475 19e23ff2f0df99ad5d9d9a60e9ce9466 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 187 2.4E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_A0475 19e23ff2f0df99ad5d9d9a60e9ce9466 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 187 199 2.4E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_A0475 19e23ff2f0df99ad5d9d9a60e9ce9466 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 171 2.4E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_A0475 19e23ff2f0df99ad5d9d9a60e9ce9466 222 SUPERFAMILY SSF46894 146 213 1.43E-20 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Vc3S01_A0475 19e23ff2f0df99ad5d9d9a60e9ce9466 222 Gene3D G3DSA:1.10.10.10 154 215 2.6E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_2032 9f657ac1a0e1a4621841f78ed9ef2748 59 Pfam PF06796 Periplasmic nitrate reductase protein NapE 5 55 3.4E-24 T 12-10-2018 IPR010649 Nitrate/trimethylamine N-oxide reductase NapE/TorE Vc3S01_2032 9f657ac1a0e1a4621841f78ed9ef2748 59 TIGRFAM TIGR02972 TMAO_torE: trimethylamine N-oxide reductase system, TorE protein 8 57 5.6E-28 T 12-10-2018 IPR014316 Trimethylamine N-oxide reductase system, TorE Vc3S01_0246 4827949f22f67b20c0a4eaa1ce2aaeea 181 SMART SM00479 7 180 1.2E-24 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Vc3S01_0246 4827949f22f67b20c0a4eaa1ce2aaeea 181 Gene3D G3DSA:3.30.420.10 1 181 5.5E-75 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Vc3S01_0246 4827949f22f67b20c0a4eaa1ce2aaeea 181 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 44.185 T 12-10-2018 IPR022894 Oligoribonuclease GO:0000175 Vc3S01_0246 4827949f22f67b20c0a4eaa1ce2aaeea 181 SUPERFAMILY SSF53098 3 180 1.97E-49 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Vc3S01_0246 4827949f22f67b20c0a4eaa1ce2aaeea 181 Pfam PF00929 Exonuclease 9 170 6.3E-37 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Vc3S01_A0800 e9153784bc68e022d27824c848128561 244 SUPERFAMILY SSF55781 87 240 6.15E-32 T 12-10-2018 Vc3S01_A0800 e9153784bc68e022d27824c848128561 244 Gene3D G3DSA:3.30.450.40 80 240 2.9E-59 T 12-10-2018 IPR029016 GAF-like domain superfamily Vc3S01_A0800 e9153784bc68e022d27824c848128561 244 Pfam PF01614 Bacterial transcriptional regulator 130 238 3.4E-14 T 12-10-2018 IPR014757 Transcription regulator IclR, C-terminal Vc3S01_A0800 e9153784bc68e022d27824c848128561 244 Gene3D G3DSA:1.10.10.10 9 79 1.5E-9 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A0800 e9153784bc68e022d27824c848128561 244 Pfam PF08279 HTH domain 16 56 4.6E-5 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 Vc3S01_A0800 e9153784bc68e022d27824c848128561 244 SUPERFAMILY SSF46785 11 77 1.87E-8 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_0599 94b804808a76945ef9cd9d7bade4f73f 579 Gene3D G3DSA:2.60.40.10 1 93 1.6E-24 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_0599 94b804808a76945ef9cd9d7bade4f73f 579 SUPERFAMILY SSF81296 2 90 4.34E-17 T 12-10-2018 IPR014756 Immunoglobulin E-set Vc3S01_0599 94b804808a76945ef9cd9d7bade4f73f 579 SUPERFAMILY SSF48208 77 565 6.8E-93 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Vc3S01_0599 94b804808a76945ef9cd9d7bade4f73f 579 Pfam PF00759 Glycosyl hydrolase family 9 99 500 8.7E-23 T 12-10-2018 IPR001701 Glycoside hydrolase family 9 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 Vc3S01_0599 94b804808a76945ef9cd9d7bade4f73f 579 Pfam PF02927 Cellulase N-terminal ig-like domain 5 83 6.6E-11 T 12-10-2018 IPR004197 Cellulase, Ig-like domain GO:0005975|GO:0008810 Vc3S01_0599 94b804808a76945ef9cd9d7bade4f73f 579 Gene3D G3DSA:1.50.10.10 94 579 3.9E-235 T 12-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 Vc3S01_A1576 aa5fd60f1f814bced7a03aac1253ac0e 141 Gene3D G3DSA:3.40.50.620 2 141 4.1E-35 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Vc3S01_A1576 aa5fd60f1f814bced7a03aac1253ac0e 141 PIRSF PIRSF006276 1 141 4.1E-43 T 12-10-2018 IPR006015 Universal stress protein A Vc3S01_A1576 aa5fd60f1f814bced7a03aac1253ac0e 141 SUPERFAMILY SSF52402 3 139 1.51E-24 T 12-10-2018 Vc3S01_A1576 aa5fd60f1f814bced7a03aac1253ac0e 141 Pfam PF00582 Universal stress protein family 3 138 5.5E-14 T 12-10-2018 IPR006016 UspA Vc3S01_1003 246eb13234cf5255297a3d8139e979e1 232 Gene3D G3DSA:3.40.50.300 21 168 2.8E-7 T 12-10-2018 Vc3S01_1003 246eb13234cf5255297a3d8139e979e1 232 SUPERFAMILY SSF52540 4 151 1.12E-5 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0593 de9ed5ceb3194394dcd8e9409f04d2b0 528 SUPERFAMILY SSF161098 2 245 6.67E-43 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_0593 de9ed5ceb3194394dcd8e9409f04d2b0 528 Gene3D G3DSA:1.10.3720.10 1 254 9.2E-54 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_0593 de9ed5ceb3194394dcd8e9409f04d2b0 528 Gene3D G3DSA:1.10.3720.10 273 527 6.5E-33 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_0593 de9ed5ceb3194394dcd8e9409f04d2b0 528 SUPERFAMILY SSF161098 269 522 2.73E-39 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_0593 de9ed5ceb3194394dcd8e9409f04d2b0 528 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 55 242 1.1E-14 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Vc3S01_0593 de9ed5ceb3194394dcd8e9409f04d2b0 528 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 330 521 8.8E-7 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Vc3S01_0430 ecbb799d173e5bcb5273e5a6d4a3c3dc 129 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 127 1.1E-53 T 12-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 Vc3S01_0430 ecbb799d173e5bcb5273e5a6d4a3c3dc 129 SUPERFAMILY SSF55298 2 128 4.87E-44 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Vc3S01_0430 ecbb799d173e5bcb5273e5a6d4a3c3dc 129 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 104 122 - T 12-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 Vc3S01_0430 ecbb799d173e5bcb5273e5a6d4a3c3dc 129 Pfam PF01042 Endoribonuclease L-PSP 8 127 4.5E-45 T 12-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 Vc3S01_0430 ecbb799d173e5bcb5273e5a6d4a3c3dc 129 Gene3D G3DSA:3.30.1330.40 2 129 6.1E-48 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Vc3S01_A0133 f8fe1ab2669cd05b7e143386ec3f9e4a 389 Pfam PF13535 ATP-grasp domain 141 276 1.6E-10 T 12-10-2018 Vc3S01_A0133 f8fe1ab2669cd05b7e143386ec3f9e4a 389 SUPERFAMILY SSF56059 93 310 7.26E-26 T 12-10-2018 Vc3S01_A0133 f8fe1ab2669cd05b7e143386ec3f9e4a 389 Gene3D G3DSA:3.30.470.20 100 387 2.7E-37 T 12-10-2018 Vc3S01_0484 4af90882c91c600bd8ed153f3e584245 384 Gene3D G3DSA:3.30.300.10 11 270 9.4E-178 T 12-10-2018 Vc3S01_0484 4af90882c91c600bd8ed153f3e584245 384 PIRSF PIRSF000497 1 381 1.3E-174 T 12-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Vc3S01_0484 4af90882c91c600bd8ed153f3e584245 384 SUPERFAMILY SSF55973 3 109 1.06E-47 T 12-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Vc3S01_0484 4af90882c91c600bd8ed153f3e584245 384 SUPERFAMILY SSF55973 111 232 8.24E-50 T 12-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Vc3S01_0484 4af90882c91c600bd8ed153f3e584245 384 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 1.8E-43 T 12-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Vc3S01_0484 4af90882c91c600bd8ed153f3e584245 384 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 369 6.1E-69 T 12-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Vc3S01_0484 4af90882c91c600bd8ed153f3e584245 384 Gene3D G3DSA:3.30.300.10 102 373 9.4E-178 T 12-10-2018 Vc3S01_0484 4af90882c91c600bd8ed153f3e584245 384 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 12-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Vc3S01_0484 4af90882c91c600bd8ed153f3e584245 384 Gene3D G3DSA:3.30.300.10 5 233 9.4E-178 T 12-10-2018 Vc3S01_0484 4af90882c91c600bd8ed153f3e584245 384 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 381 58.7 T 12-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Vc3S01_0484 4af90882c91c600bd8ed153f3e584245 384 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 231 8.5E-44 T 12-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Vc3S01_0484 4af90882c91c600bd8ed153f3e584245 384 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 379 4.8E-196 T 12-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Vc3S01_0484 4af90882c91c600bd8ed153f3e584245 384 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 12-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Vc3S01_0484 4af90882c91c600bd8ed153f3e584245 384 SUPERFAMILY SSF55973 233 382 5.89E-71 T 12-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Vc3S01_A0500 9df778dc631afb98d88d56f4d33335ed 194 Gene3D G3DSA:1.10.150.240 2 63 5.1E-42 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Vc3S01_A0500 9df778dc631afb98d88d56f4d33335ed 194 Gene3D G3DSA:3.40.50.1000 64 160 5.1E-42 T 12-10-2018 IPR023214 HAD superfamily Vc3S01_A0500 9df778dc631afb98d88d56f4d33335ed 194 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 125 145 3.9E-7 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Vc3S01_A0500 9df778dc631afb98d88d56f4d33335ed 194 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 76 89 3.9E-7 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Vc3S01_A0500 9df778dc631afb98d88d56f4d33335ed 194 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 107 123 3.9E-7 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Vc3S01_A0500 9df778dc631afb98d88d56f4d33335ed 194 SUPERFAMILY SSF56784 3 188 6.2E-40 T 12-10-2018 IPR036412 HAD-like superfamily Vc3S01_A0500 9df778dc631afb98d88d56f4d33335ed 194 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 58 161 2.8E-17 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Vc3S01_A0500 9df778dc631afb98d88d56f4d33335ed 194 Pfam PF13419 Haloacid dehalogenase-like hydrolase 4 161 6.4E-25 T 12-10-2018 Vc3S01_1836 0b1668fda7d55c5681b49ee6e1bbb6d7 138 Pfam PF07007 Lysozyme inhibitor LprI 25 116 9.5E-15 T 12-10-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal Vc3S01_1836 0b1668fda7d55c5681b49ee6e1bbb6d7 138 Gene3D G3DSA:1.20.1270.180 17 128 6.0E-13 T 12-10-2018 Vc3S01_0458 d7aee8217952045c071bcbdcebbd7ff4 478 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 250 257 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 Vc3S01_0458 d7aee8217952045c071bcbdcebbd7ff4 478 SUPERFAMILY SSF53720 17 475 9.69E-155 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Vc3S01_0458 d7aee8217952045c071bcbdcebbd7ff4 478 Pfam PF00171 Aldehyde dehydrogenase family 20 471 2.4E-160 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Vc3S01_0458 d7aee8217952045c071bcbdcebbd7ff4 478 Gene3D G3DSA:3.40.605.10 19 467 1.8E-167 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Vc3S01_0458 d7aee8217952045c071bcbdcebbd7ff4 478 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 278 289 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 Vc3S01_0458 d7aee8217952045c071bcbdcebbd7ff4 478 Gene3D G3DSA:3.40.309.10 257 444 1.8E-167 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Vc3S01_0653 6d89c2f47a0710c5aa91a0dd0f06893d 406 Hamap MF_00740 Phosphopentomutase [deoB]. 1 406 54.025 T 12-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 Vc3S01_0653 6d89c2f47a0710c5aa91a0dd0f06893d 406 SUPERFAMILY SSF143856 118 234 5.1E-48 T 12-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 Vc3S01_0653 6d89c2f47a0710c5aa91a0dd0f06893d 406 Pfam PF01676 Metalloenzyme superfamily 2 397 1.9E-42 T 12-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 Vc3S01_0653 6d89c2f47a0710c5aa91a0dd0f06893d 406 SUPERFAMILY SSF53649 1 406 2.36E-69 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Vc3S01_0653 6d89c2f47a0710c5aa91a0dd0f06893d 406 Gene3D G3DSA:3.30.70.1250 116 237 3.8E-149 T 12-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 Vc3S01_0653 6d89c2f47a0710c5aa91a0dd0f06893d 406 PIRSF PIRSF001491 1 406 1.4E-160 T 12-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 Vc3S01_0653 6d89c2f47a0710c5aa91a0dd0f06893d 406 TIGRFAM TIGR01696 deoB: phosphopentomutase 3 403 1.0E-176 T 12-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 Vc3S01_0653 6d89c2f47a0710c5aa91a0dd0f06893d 406 Gene3D G3DSA:3.40.720.10 3 406 3.8E-149 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Vc3S01_A1914 dae83e1b645b47e02240ab03ae7718c5 431 Gene3D G3DSA:1.20.1250.20 219 414 2.1E-19 T 12-10-2018 Vc3S01_A1914 dae83e1b645b47e02240ab03ae7718c5 431 Gene3D G3DSA:1.20.1250.20 13 214 1.8E-22 T 12-10-2018 Vc3S01_A1914 dae83e1b645b47e02240ab03ae7718c5 431 SUPERFAMILY SSF103473 12 414 1.7E-51 T 12-10-2018 IPR036259 MFS transporter superfamily Vc3S01_A1914 dae83e1b645b47e02240ab03ae7718c5 431 Pfam PF07690 Major Facilitator Superfamily 22 368 2.8E-29 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Vc3S01_2919 a7cce014599a851da5a362b0f6ba5fe0 129 SUPERFAMILY SSF53137 14 129 6.54E-48 T 12-10-2018 Vc3S01_2919 a7cce014599a851da5a362b0f6ba5fe0 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 129 32.665 T 12-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 Vc3S01_2919 a7cce014599a851da5a362b0f6ba5fe0 129 Pfam PF00411 Ribosomal protein S11 19 128 1.5E-52 T 12-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 Vc3S01_2919 a7cce014599a851da5a362b0f6ba5fe0 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 4.2E-55 T 12-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_2919 a7cce014599a851da5a362b0f6ba5fe0 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 12-10-2018 IPR018102 Ribosomal S11, conserved site Vc3S01_2919 a7cce014599a851da5a362b0f6ba5fe0 129 PIRSF PIRSF002131 1 129 2.1E-52 T 12-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 Vc3S01_2919 a7cce014599a851da5a362b0f6ba5fe0 129 Gene3D G3DSA:3.30.420.80 1 129 3.3E-57 T 12-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 Vc3S01_0838 e34a7bd8234bfb7004c0f33883fa9148 332 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 252 294 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Vc3S01_0838 e34a7bd8234bfb7004c0f33883fa9148 332 Pfam PF12833 Helix-turn-helix domain 221 299 4.2E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_0838 e34a7bd8234bfb7004c0f33883fa9148 332 SMART SM00342 215 298 3.8E-31 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_0838 e34a7bd8234bfb7004c0f33883fa9148 332 SUPERFAMILY SSF51182 24 98 9.46E-6 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily Vc3S01_0838 e34a7bd8234bfb7004c0f33883fa9148 332 SUPERFAMILY SSF46689 251 302 2.78E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_0838 e34a7bd8234bfb7004c0f33883fa9148 332 Gene3D G3DSA:1.10.10.60 249 304 5.8E-19 T 12-10-2018 Vc3S01_0838 e34a7bd8234bfb7004c0f33883fa9148 332 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 282 298 7.8E-7 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Vc3S01_0838 e34a7bd8234bfb7004c0f33883fa9148 332 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 267 282 7.8E-7 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Vc3S01_0838 e34a7bd8234bfb7004c0f33883fa9148 332 Gene3D G3DSA:1.10.10.60 197 248 2.8E-13 T 12-10-2018 Vc3S01_0838 e34a7bd8234bfb7004c0f33883fa9148 332 SUPERFAMILY SSF46689 199 249 1.43E-6 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_2149 e27e772b4ed467127c9656e1f222f859 88 TIGRFAM TIGR01403 fliQ_rel_III: type III secretion protein, HrpO family 5 84 5.8E-32 T 12-10-2018 IPR006306 Type III secretion protein HrpO GO:0009306|GO:0016021 Vc3S01_2149 e27e772b4ed467127c9656e1f222f859 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 7.3E-25 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Vc3S01_2149 e27e772b4ed467127c9656e1f222f859 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 7.3E-25 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Vc3S01_2149 e27e772b4ed467127c9656e1f222f859 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 7.3E-25 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Vc3S01_2149 e27e772b4ed467127c9656e1f222f859 88 Pfam PF01313 Bacterial export proteins, family 3 6 77 3.3E-24 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Vc3S01_2149 e27e772b4ed467127c9656e1f222f859 88 PIRSF PIRSF004669 1 88 1.0E-25 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Vc3S01_A1440 2761bd95e65b474012091cfd8a001b84 421 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 330 353 1.9E-6 T 12-10-2018 IPR011889 Bacterial surface protein 26-residue repeat Vc3S01_A1440 2761bd95e65b474012091cfd8a001b84 421 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 280 304 1.3E-7 T 12-10-2018 IPR011889 Bacterial surface protein 26-residue repeat Vc3S01_A1440 2761bd95e65b474012091cfd8a001b84 421 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 355 379 8.2E-7 T 12-10-2018 IPR011889 Bacterial surface protein 26-residue repeat Vc3S01_A1440 2761bd95e65b474012091cfd8a001b84 421 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 81 103 9.7E-7 T 12-10-2018 IPR011889 Bacterial surface protein 26-residue repeat Vc3S01_A1440 2761bd95e65b474012091cfd8a001b84 421 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 205 229 1.6E-6 T 12-10-2018 IPR011889 Bacterial surface protein 26-residue repeat Vc3S01_A1440 2761bd95e65b474012091cfd8a001b84 421 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 255 279 3.2E-4 T 12-10-2018 IPR011889 Bacterial surface protein 26-residue repeat Vc3S01_A1440 2761bd95e65b474012091cfd8a001b84 421 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 130 154 1.3E-5 T 12-10-2018 IPR011889 Bacterial surface protein 26-residue repeat Vc3S01_A1440 2761bd95e65b474012091cfd8a001b84 421 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 230 254 1.7E-4 T 12-10-2018 IPR011889 Bacterial surface protein 26-residue repeat Vc3S01_A1440 2761bd95e65b474012091cfd8a001b84 421 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 155 178 2.6E-6 T 12-10-2018 IPR011889 Bacterial surface protein 26-residue repeat Vc3S01_A1440 2761bd95e65b474012091cfd8a001b84 421 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 309 329 6.8E-4 T 12-10-2018 IPR011889 Bacterial surface protein 26-residue repeat Vc3S01_A1440 2761bd95e65b474012091cfd8a001b84 421 Pfam PF03382 Mycoplasma protein of unknown function, DUF285 314 409 6.0E-34 T 12-10-2018 IPR005046 Protein of unknown function DUF285 Vc3S01_A1440 2761bd95e65b474012091cfd8a001b84 421 Pfam PF03382 Mycoplasma protein of unknown function, DUF285 139 244 5.5E-42 T 12-10-2018 IPR005046 Protein of unknown function DUF285 Vc3S01_1586 d6e1581a98fb1c3e75f0b90888803c62 239 SUPERFAMILY SSF46785 18 110 3.58E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_1586 d6e1581a98fb1c3e75f0b90888803c62 239 Gene3D G3DSA:1.20.120.530 85 225 2.3E-28 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Vc3S01_1586 d6e1581a98fb1c3e75f0b90888803c62 239 SMART SM00345 24 82 5.5E-15 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Vc3S01_1586 d6e1581a98fb1c3e75f0b90888803c62 239 SUPERFAMILY SSF48008 88 223 1.23E-24 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Vc3S01_1586 d6e1581a98fb1c3e75f0b90888803c62 239 SMART SM00895 92 219 5.1E-23 T 12-10-2018 IPR011711 GntR, C-terminal Vc3S01_1586 d6e1581a98fb1c3e75f0b90888803c62 239 Pfam PF07729 FCD domain 92 217 1.2E-25 T 12-10-2018 IPR011711 GntR, C-terminal Vc3S01_1586 d6e1581a98fb1c3e75f0b90888803c62 239 Gene3D G3DSA:1.10.10.10 3 83 2.1E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_1586 d6e1581a98fb1c3e75f0b90888803c62 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 82 3.6E-16 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Vc3S01_A1058 68559f47e08a4dc6f895dec0f6e85080 417 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site Vc3S01_A1058 68559f47e08a4dc6f895dec0f6e85080 417 Gene3D G3DSA:3.40.50.300 2 209 1.6E-77 T 12-10-2018 Vc3S01_A1058 68559f47e08a4dc6f895dec0f6e85080 417 SMART SM00490 257 338 3.0E-32 T 12-10-2018 IPR001650 Helicase, C-terminal Vc3S01_A1058 68559f47e08a4dc6f895dec0f6e85080 417 SMART SM00487 22 221 2.1E-61 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Vc3S01_A1058 68559f47e08a4dc6f895dec0f6e85080 417 SUPERFAMILY SSF52540 74 359 2.77E-77 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A1058 68559f47e08a4dc6f895dec0f6e85080 417 Pfam PF00271 Helicase conserved C-terminal domain 233 338 1.3E-27 T 12-10-2018 IPR001650 Helicase, C-terminal Vc3S01_A1058 68559f47e08a4dc6f895dec0f6e85080 417 Gene3D G3DSA:3.40.50.300 213 416 1.1E-47 T 12-10-2018 Vc3S01_A1058 68559f47e08a4dc6f895dec0f6e85080 417 Pfam PF00270 DEAD/DEAH box helicase 27 194 3.4E-54 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Vc3S01_0314 5feb726c95190a31f56c3519eaf23ac1 302 SUPERFAMILY SSF53850 89 294 1.36E-40 T 12-10-2018 Vc3S01_0314 5feb726c95190a31f56c3519eaf23ac1 302 Gene3D G3DSA:1.10.10.10 1 84 1.7E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_0314 5feb726c95190a31f56c3519eaf23ac1 302 SUPERFAMILY SSF46785 1 86 4.75E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_0314 5feb726c95190a31f56c3519eaf23ac1 302 Pfam PF03466 LysR substrate binding domain 89 291 3.4E-44 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_0314 5feb726c95190a31f56c3519eaf23ac1 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.0E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_0314 5feb726c95190a31f56c3519eaf23ac1 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.0E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_0314 5feb726c95190a31f56c3519eaf23ac1 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.0E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_0314 5feb726c95190a31f56c3519eaf23ac1 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.3E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_0314 5feb726c95190a31f56c3519eaf23ac1 302 Gene3D G3DSA:3.40.190.10 91 281 2.1E-66 T 12-10-2018 Vc3S01_0314 5feb726c95190a31f56c3519eaf23ac1 302 Gene3D G3DSA:3.40.190.10 164 267 2.1E-66 T 12-10-2018 Vc3S01_A1667 513cbbede8550ca3b4f2219caad906ab 418 SUPERFAMILY SSF52374 2 323 1.23E-100 T 12-10-2018 Vc3S01_A1667 513cbbede8550ca3b4f2219caad906ab 418 SUPERFAMILY SSF55174 321 414 1.23E-14 T 12-10-2018 Vc3S01_A1667 513cbbede8550ca3b4f2219caad906ab 418 Gene3D G3DSA:3.40.50.620 1 222 3.2E-90 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Vc3S01_A1667 513cbbede8550ca3b4f2219caad906ab 418 Pfam PF00579 tRNA synthetases class I (W and Y) 29 323 2.2E-83 T 12-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Vc3S01_A1667 513cbbede8550ca3b4f2219caad906ab 418 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 3 414 8.2E-125 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Vc3S01_A1667 513cbbede8550ca3b4f2219caad906ab 418 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 38 48 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Vc3S01_A1667 513cbbede8550ca3b4f2219caad906ab 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 162 177 9.4E-32 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Vc3S01_A1667 513cbbede8550ca3b4f2219caad906ab 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 183 205 9.4E-32 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Vc3S01_A1667 513cbbede8550ca3b4f2219caad906ab 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 216 228 9.4E-32 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Vc3S01_A1667 513cbbede8550ca3b4f2219caad906ab 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 42 64 9.4E-32 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Vc3S01_A1667 513cbbede8550ca3b4f2219caad906ab 418 Gene3D G3DSA:3.10.290.10 326 417 4.7E-22 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Vc3S01_A1667 513cbbede8550ca3b4f2219caad906ab 418 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 1 415 44.36 T 12-10-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 Vc3S01_A1667 513cbbede8550ca3b4f2219caad906ab 418 Gene3D G3DSA:1.10.240.10 223 325 5.1E-37 T 12-10-2018 Vc3S01_3165 9077e3e3ba4350b1cf281197f3bda699 277 SUPERFAMILY SSF53223 6 105 1.78E-31 T 12-10-2018 Vc3S01_3165 9077e3e3ba4350b1cf281197f3bda699 277 Gene3D G3DSA:3.40.50.720 119 239 1.7E-83 T 12-10-2018 Vc3S01_3165 9077e3e3ba4350b1cf281197f3bda699 277 Gene3D G3DSA:3.40.50.10860 8 258 1.7E-83 T 12-10-2018 Vc3S01_3165 9077e3e3ba4350b1cf281197f3bda699 277 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 8 274 2.2E-82 T 12-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 Vc3S01_3165 9077e3e3ba4350b1cf281197f3bda699 277 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 120 195 1.6E-13 T 12-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase Vc3S01_3165 9077e3e3ba4350b1cf281197f3bda699 277 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 5 273 31.925 T 12-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 Vc3S01_3165 9077e3e3ba4350b1cf281197f3bda699 277 SUPERFAMILY SSF51735 106 273 4.15E-40 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_3165 9077e3e3ba4350b1cf281197f3bda699 277 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 10 92 5.5E-23 T 12-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 Vc3S01_A1582 5921196226eaf5501d9c151da38c3993 385 Gene3D G3DSA:2.40.50.940 223 346 2.5E-30 T 12-10-2018 Vc3S01_A1582 5921196226eaf5501d9c151da38c3993 385 Gene3D G3DSA:3.40.50.300 4 222 9.1E-64 T 12-10-2018 Vc3S01_A1582 5921196226eaf5501d9c151da38c3993 385 SMART SM00382 29 212 9.8E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_A1582 5921196226eaf5501d9c151da38c3993 385 Pfam PF08402 TOBE domain 273 345 5.2E-13 T 12-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Vc3S01_A1582 5921196226eaf5501d9c151da38c3993 385 SUPERFAMILY SSF52540 4 243 2.46E-85 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A1582 5921196226eaf5501d9c151da38c3993 385 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_A1582 5921196226eaf5501d9c151da38c3993 385 Pfam PF00005 ABC transporter 21 162 3.3E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_A1582 5921196226eaf5501d9c151da38c3993 385 SUPERFAMILY SSF50331 237 353 3.4E-27 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Vc3S01_A1582 5921196226eaf5501d9c151da38c3993 385 Gene3D G3DSA:2.40.50.140 280 337 2.5E-30 T 12-10-2018 Vc3S01_A0878 538d50aebfba7ec8dc517b99d13a4136 262 Gene3D G3DSA:3.90.226.10 4 262 9.0E-79 T 12-10-2018 Vc3S01_A0878 538d50aebfba7ec8dc517b99d13a4136 262 SUPERFAMILY SSF52096 5 261 2.11E-77 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Vc3S01_A0878 538d50aebfba7ec8dc517b99d13a4136 262 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 103 123 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 Vc3S01_A0878 538d50aebfba7ec8dc517b99d13a4136 262 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 262 3.1E-57 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 Vc3S01_2438 502c9637089a28b806fb4f27cc714fa2 1255 PRINTS PR01441 Cellulose synthase subunit C signature 1120 1144 3.8E-9 T 12-10-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 Vc3S01_2438 502c9637089a28b806fb4f27cc714fa2 1255 PRINTS PR01441 Cellulose synthase subunit C signature 102 122 3.8E-9 T 12-10-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 Vc3S01_2438 502c9637089a28b806fb4f27cc714fa2 1255 PRINTS PR01441 Cellulose synthase subunit C signature 531 551 3.8E-9 T 12-10-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 Vc3S01_2438 502c9637089a28b806fb4f27cc714fa2 1255 Pfam PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) 923 1236 1.6E-96 T 12-10-2018 IPR008410 Cellulose synthase operon C, C-terminal GO:0019867|GO:0030244 Vc3S01_2438 502c9637089a28b806fb4f27cc714fa2 1255 SMART SM00028 339 372 1.1E-4 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_2438 502c9637089a28b806fb4f27cc714fa2 1255 SMART SM00028 94 127 0.3 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_2438 502c9637089a28b806fb4f27cc714fa2 1255 SMART SM00028 305 338 380.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_2438 502c9637089a28b806fb4f27cc714fa2 1255 SMART SM00028 387 420 0.08 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_2438 502c9637089a28b806fb4f27cc714fa2 1255 SMART SM00028 421 454 0.072 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_2438 502c9637089a28b806fb4f27cc714fa2 1255 Gene3D G3DSA:1.25.40.10 59 203 1.9E-9 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_2438 502c9637089a28b806fb4f27cc714fa2 1255 Gene3D G3DSA:1.25.40.10 386 668 4.2E-19 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_2438 502c9637089a28b806fb4f27cc714fa2 1255 Pfam PF13432 Tetratricopeptide repeat 427 480 2.3E-4 T 12-10-2018 Vc3S01_2438 502c9637089a28b806fb4f27cc714fa2 1255 Gene3D G3DSA:1.25.40.10 282 384 3.4E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_2438 502c9637089a28b806fb4f27cc714fa2 1255 SUPERFAMILY SSF48452 333 474 8.09E-19 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_2438 502c9637089a28b806fb4f27cc714fa2 1255 Pfam PF13174 Tetratricopeptide repeat 97 127 7.1E-4 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_2438 502c9637089a28b806fb4f27cc714fa2 1255 Pfam PF14559 Tetratricopeptide repeat 315 379 1.7E-6 T 12-10-2018 Vc3S01_2438 502c9637089a28b806fb4f27cc714fa2 1255 Pfam PF13181 Tetratricopeptide repeat 389 418 0.016 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_2438 502c9637089a28b806fb4f27cc714fa2 1255 SUPERFAMILY SSF48452 84 369 7.59E-13 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_A0950 a61dd068e64a7b0d606865430dc1a7f3 449 Gene3D G3DSA:3.40.190.10 29 427 3.8E-141 T 12-10-2018 Vc3S01_A0950 a61dd068e64a7b0d606865430dc1a7f3 449 Pfam PF13379 NMT1-like family 23 303 3.4E-105 T 12-10-2018 Vc3S01_A0950 a61dd068e64a7b0d606865430dc1a7f3 449 SUPERFAMILY SSF53850 29 330 9.12E-20 T 12-10-2018 Vc3S01_A0950 a61dd068e64a7b0d606865430dc1a7f3 449 Gene3D G3DSA:3.40.190.10 114 432 3.8E-141 T 12-10-2018 Vc3S01_1981 1663eca84edb9fab15c70a3c68c38066 578 Pfam PF00149 Calcineurin-like phosphoesterase 46 271 5.9E-15 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Vc3S01_1981 1663eca84edb9fab15c70a3c68c38066 578 Pfam PF02872 5'-nucleotidase, C-terminal domain 379 526 5.1E-30 T 12-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Vc3S01_1981 1663eca84edb9fab15c70a3c68c38066 578 Gene3D G3DSA:3.60.21.10 40 375 2.5E-107 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like Vc3S01_1981 1663eca84edb9fab15c70a3c68c38066 578 SUPERFAMILY SSF56300 41 374 3.35E-88 T 12-10-2018 Vc3S01_1981 1663eca84edb9fab15c70a3c68c38066 578 Gene3D G3DSA:3.90.780.10 376 560 4.6E-45 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Vc3S01_1981 1663eca84edb9fab15c70a3c68c38066 578 SUPERFAMILY SSF55816 377 555 9.94E-42 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Vc3S01_1981 1663eca84edb9fab15c70a3c68c38066 578 ProSitePatterns PS00786 5'-nucleotidase signature 2. 121 132 - T 12-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Vc3S01_1981 1663eca84edb9fab15c70a3c68c38066 578 PRINTS PR01607 Apyrase family signature 224 241 6.5E-44 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Vc3S01_1981 1663eca84edb9fab15c70a3c68c38066 578 PRINTS PR01607 Apyrase family signature 432 455 6.5E-44 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Vc3S01_1981 1663eca84edb9fab15c70a3c68c38066 578 PRINTS PR01607 Apyrase family signature 501 520 6.5E-44 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Vc3S01_1981 1663eca84edb9fab15c70a3c68c38066 578 PRINTS PR01607 Apyrase family signature 44 62 6.5E-44 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Vc3S01_1981 1663eca84edb9fab15c70a3c68c38066 578 PRINTS PR01607 Apyrase family signature 255 278 6.5E-44 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Vc3S01_1981 1663eca84edb9fab15c70a3c68c38066 578 PRINTS PR01607 Apyrase family signature 300 320 6.5E-44 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Vc3S01_3067 d4b7cd357c36b132601f7714224608e1 305 Gene3D G3DSA:3.10.129.10 147 298 2.4E-47 T 12-10-2018 Vc3S01_3067 d4b7cd357c36b132601f7714224608e1 305 Gene3D G3DSA:3.40.630.30 3 145 9.0E-28 T 12-10-2018 Vc3S01_3067 d4b7cd357c36b132601f7714224608e1 305 Pfam PF13673 Acetyltransferase (GNAT) domain 63 144 1.9E-11 T 12-10-2018 IPR000182 GNAT domain Vc3S01_3067 d4b7cd357c36b132601f7714224608e1 305 SUPERFAMILY SSF55729 2 155 1.44E-28 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_3067 d4b7cd357c36b132601f7714224608e1 305 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 164 297 6.4E-45 T 12-10-2018 IPR012660 Thioesterase, putative Vc3S01_3067 d4b7cd357c36b132601f7714224608e1 305 SUPERFAMILY SSF54637 154 296 8.64E-40 T 12-10-2018 IPR029069 HotDog domain superfamily Vc3S01_3067 d4b7cd357c36b132601f7714224608e1 305 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 157 296 4.4E-52 T 12-10-2018 IPR012660 Thioesterase, putative Vc3S01_A0364 a9eb2af130a11aaa71a45f6eedbb95b3 255 Pfam PF00813 FliP family 58 250 2.9E-75 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Vc3S01_A0364 a9eb2af130a11aaa71a45f6eedbb95b3 255 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 154 166 2.3E-13 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Vc3S01_A0364 a9eb2af130a11aaa71a45f6eedbb95b3 255 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 114 126 2.3E-13 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Vc3S01_A0364 a9eb2af130a11aaa71a45f6eedbb95b3 255 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 244 254 2.3E-13 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Vc3S01_A0364 a9eb2af130a11aaa71a45f6eedbb95b3 255 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 54 63 2.3E-13 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Vc3S01_A0364 a9eb2af130a11aaa71a45f6eedbb95b3 255 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 176 188 2.3E-13 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Vc3S01_A0364 a9eb2af130a11aaa71a45f6eedbb95b3 255 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 126 140 2.3E-13 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Vc3S01_A0364 a9eb2af130a11aaa71a45f6eedbb95b3 255 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 204 225 3.9E-65 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Vc3S01_A0364 a9eb2af130a11aaa71a45f6eedbb95b3 255 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 183 203 3.9E-65 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Vc3S01_A0364 a9eb2af130a11aaa71a45f6eedbb95b3 255 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 56 75 3.9E-65 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Vc3S01_A0364 a9eb2af130a11aaa71a45f6eedbb95b3 255 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 228 253 3.9E-65 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Vc3S01_A0364 a9eb2af130a11aaa71a45f6eedbb95b3 255 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 75 95 3.9E-65 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Vc3S01_A0364 a9eb2af130a11aaa71a45f6eedbb95b3 255 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 95 114 3.9E-65 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Vc3S01_A0364 a9eb2af130a11aaa71a45f6eedbb95b3 255 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 58 254 3.7E-76 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Vc3S01_A0364 a9eb2af130a11aaa71a45f6eedbb95b3 255 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 183 198 - T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Vc3S01_A0364 a9eb2af130a11aaa71a45f6eedbb95b3 255 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 231 243 - T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Vc3S01_2563 809f6ea913cab3febaeeaace68d9e208 321 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 3 320 5.3E-101 T 12-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 Vc3S01_2563 809f6ea913cab3febaeeaace68d9e208 321 SUPERFAMILY SSF56042 141 307 1.94E-33 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Vc3S01_2563 809f6ea913cab3febaeeaace68d9e208 321 Gene3D G3DSA:3.30.1330.10 1 143 1.1E-40 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Vc3S01_2563 809f6ea913cab3febaeeaace68d9e208 321 Pfam PF02769 AIR synthase related protein, C-terminal domain 149 303 8.5E-10 T 12-10-2018 IPR010918 PurM-like, C-terminal domain Vc3S01_2563 809f6ea913cab3febaeeaace68d9e208 321 PIRSF PIRSF005303 1 320 8.2E-80 T 12-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 Vc3S01_2563 809f6ea913cab3febaeeaace68d9e208 321 Gene3D G3DSA:3.90.650.10 144 320 3.6E-48 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Vc3S01_2563 809f6ea913cab3febaeeaace68d9e208 321 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 2 320 26.649 T 12-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 Vc3S01_2563 809f6ea913cab3febaeeaace68d9e208 321 Pfam PF00586 AIR synthase related protein, N-terminal domain 28 137 1.8E-20 T 12-10-2018 IPR016188 PurM-like, N-terminal domain Vc3S01_2563 809f6ea913cab3febaeeaace68d9e208 321 SUPERFAMILY SSF55326 3 137 1.7E-32 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Vc3S01_A0397 12057ae4ad65a6ea3057c556d27bbf87 231 Gene3D G3DSA:2.60.40.2130 31 176 4.4E-13 T 12-10-2018 IPR038678 Spondin, N-terminal domain superfamily Reactome: R-HSA-5083635|Reactome: R-HSA-5173214 Vc3S01_A0397 12057ae4ad65a6ea3057c556d27bbf87 231 Pfam PF06468 Spondin_N 45 164 1.1E-10 T 12-10-2018 IPR009465 Spondin, N-terminal Reactome: R-HSA-5083635|Reactome: R-HSA-5173214 Vc3S01_A1170 199bf51a748f1c0b966126e66b7f33da 443 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 373 9.7E-150 T 12-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 Vc3S01_A1170 199bf51a748f1c0b966126e66b7f33da 443 PIRSF PIRSF004539 1 441 4.7E-185 T 12-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 Vc3S01_A1170 199bf51a748f1c0b966126e66b7f33da 443 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 6 440 1.3E-146 T 12-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 Vc3S01_1168 3481f71b1c27cff340693d1e59848b60 395 SUPERFAMILY SSF52058 7 180 7.14E-33 T 12-10-2018 Vc3S01_1168 3481f71b1c27cff340693d1e59848b60 395 SMART SM00364 41 60 8.3 T 12-10-2018 Vc3S01_1168 3481f71b1c27cff340693d1e59848b60 395 SMART SM00364 132 151 200.0 T 12-10-2018 Vc3S01_1168 3481f71b1c27cff340693d1e59848b60 395 SMART SM00364 86 105 15.0 T 12-10-2018 Vc3S01_1168 3481f71b1c27cff340693d1e59848b60 395 SMART SM00364 18 38 190.0 T 12-10-2018 Vc3S01_1168 3481f71b1c27cff340693d1e59848b60 395 Pfam PF13855 Leucine rich repeat 20 75 1.4E-6 T 12-10-2018 IPR001611 Leucine-rich repeat GO:0005515 Vc3S01_1168 3481f71b1c27cff340693d1e59848b60 395 Pfam PF13855 Leucine rich repeat 87 145 3.0E-9 T 12-10-2018 IPR001611 Leucine-rich repeat GO:0005515 Vc3S01_1168 3481f71b1c27cff340693d1e59848b60 395 Pfam PF00069 Protein kinase domain 186 352 3.8E-16 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Vc3S01_1168 3481f71b1c27cff340693d1e59848b60 395 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 192 219 - T 12-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 Vc3S01_1168 3481f71b1c27cff340693d1e59848b60 395 SMART SM00369 17 40 37.0 T 12-10-2018 IPR003591 Leucine-rich repeat, typical subtype Vc3S01_1168 3481f71b1c27cff340693d1e59848b60 395 SMART SM00369 41 64 5.5 T 12-10-2018 IPR003591 Leucine-rich repeat, typical subtype Vc3S01_1168 3481f71b1c27cff340693d1e59848b60 395 SMART SM00369 132 155 11.0 T 12-10-2018 IPR003591 Leucine-rich repeat, typical subtype Vc3S01_1168 3481f71b1c27cff340693d1e59848b60 395 SMART SM00369 110 131 280.0 T 12-10-2018 IPR003591 Leucine-rich repeat, typical subtype Vc3S01_1168 3481f71b1c27cff340693d1e59848b60 395 SMART SM00369 85 109 83.0 T 12-10-2018 IPR003591 Leucine-rich repeat, typical subtype Vc3S01_1168 3481f71b1c27cff340693d1e59848b60 395 Gene3D G3DSA:3.30.200.20 175 267 4.5E-9 T 12-10-2018 Vc3S01_1168 3481f71b1c27cff340693d1e59848b60 395 SMART SM00220 186 391 1.5E-5 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Vc3S01_1168 3481f71b1c27cff340693d1e59848b60 395 Gene3D G3DSA:3.80.10.10 83 174 6.5E-18 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily Vc3S01_1168 3481f71b1c27cff340693d1e59848b60 395 Gene3D G3DSA:3.80.10.10 5 82 2.8E-17 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily Vc3S01_1168 3481f71b1c27cff340693d1e59848b60 395 Gene3D G3DSA:1.10.510.10 285 381 1.2E-10 T 12-10-2018 Vc3S01_1168 3481f71b1c27cff340693d1e59848b60 395 SUPERFAMILY SSF56112 178 352 6.42E-25 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily Vc3S01_A0168 6b96bb762f03ac44336145da3c1e9558 615 SUPERFAMILY SSF55486 3 550 1.78E-75 T 12-10-2018 Vc3S01_A0168 6b96bb762f03ac44336145da3c1e9558 615 Gene3D G3DSA:1.10.1370.40 276 473 1.3E-12 T 12-10-2018 Vc3S01_A0168 6b96bb762f03ac44336145da3c1e9558 615 Pfam PF01432 Peptidase family M3 283 494 5.0E-17 T 12-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 Vc3S01_A0168 6b96bb762f03ac44336145da3c1e9558 615 Gene3D G3DSA:1.10.1370.10 135 244 6.3E-6 T 12-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 Vc3S01_1222 c42bca194c3201de11c09249f6c3a015 410 PIRSF PIRSF006728 1 391 1.9E-113 T 12-10-2018 IPR008135 Competence-induced protein CinA Vc3S01_1222 c42bca194c3201de11c09249f6c3a015 410 SUPERFAMILY SSF53218 2 204 1.83E-33 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily Vc3S01_1222 c42bca194c3201de11c09249f6c3a015 410 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 2 403 2.2E-75 T 12-10-2018 IPR008135 Competence-induced protein CinA Vc3S01_1222 c42bca194c3201de11c09249f6c3a015 410 Gene3D G3DSA:3.40.980.10 1 171 2.1E-43 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily Vc3S01_1222 c42bca194c3201de11c09249f6c3a015 410 Pfam PF00994 Probable molybdopterin binding domain 4 170 2.9E-28 T 12-10-2018 IPR001453 MoaB/Mog domain Vc3S01_1222 c42bca194c3201de11c09249f6c3a015 410 SUPERFAMILY SSF142433 251 386 1.11E-8 T 12-10-2018 IPR036653 CinA-like, C-terminal Vc3S01_1222 c42bca194c3201de11c09249f6c3a015 410 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 410 104.186 T 12-10-2018 IPR008135 Competence-induced protein CinA Vc3S01_1222 c42bca194c3201de11c09249f6c3a015 410 SMART SM00852 4 171 7.6E-30 T 12-10-2018 IPR001453 MoaB/Mog domain Vc3S01_1453 f392b9623598c21a3682545b39ae4718 815 Gene3D G3DSA:3.40.228.10 341 411 7.6E-17 T 12-10-2018 Vc3S01_1453 f392b9623598c21a3682545b39ae4718 815 TIGRFAM TIGR02166 dmsA_ynfE: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 9 808 0.0 T 12-10-2018 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE GO:0009389|GO:0030151|GO:0051539|GO:0055114 Vc3S01_1453 f392b9623598c21a3682545b39ae4718 815 SMART SM00926 50 110 2.4E-12 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Vc3S01_1453 f392b9623598c21a3682545b39ae4718 815 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 50 110 2.4E-16 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Vc3S01_1453 f392b9623598c21a3682545b39ae4718 815 Pfam PF00384 Molybdopterin oxidoreductase 113 570 2.1E-96 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Vc3S01_1453 f392b9623598c21a3682545b39ae4718 815 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 726 753 - T 12-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 Vc3S01_1453 f392b9623598c21a3682545b39ae4718 815 Pfam PF01568 Molydopterin dinucleotide binding domain 690 801 2.2E-24 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Vc3S01_1453 f392b9623598c21a3682545b39ae4718 815 SUPERFAMILY SSF50692 636 806 1.68E-35 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Vc3S01_1453 f392b9623598c21a3682545b39ae4718 815 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 55 73 - T 12-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 Vc3S01_1453 f392b9623598c21a3682545b39ae4718 815 Gene3D G3DSA:3.40.50.740 49 322 6.1E-81 T 12-10-2018 Vc3S01_1453 f392b9623598c21a3682545b39ae4718 815 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 511 528 - T 12-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 Vc3S01_1453 f392b9623598c21a3682545b39ae4718 815 SUPERFAMILY SSF53706 51 692 1.83E-175 T 12-10-2018 Vc3S01_1453 f392b9623598c21a3682545b39ae4718 815 Gene3D G3DSA:2.40.40.20 665 812 1.7E-39 T 12-10-2018 Vc3S01_1453 f392b9623598c21a3682545b39ae4718 815 Gene3D G3DSA:3.40.50.740 412 621 3.6E-52 T 12-10-2018 Vc3S01_A1043 892e8c5a0dc81f196ad51e4d76cf1a12 244 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_A1043 892e8c5a0dc81f196ad51e4d76cf1a12 244 PIRSF PIRSF039085 4 243 5.5E-103 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 Vc3S01_A1043 892e8c5a0dc81f196ad51e4d76cf1a12 244 SUPERFAMILY SSF52540 8 237 1.42E-77 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A1043 892e8c5a0dc81f196ad51e4d76cf1a12 244 Gene3D G3DSA:3.40.50.300 5 244 6.2E-76 T 12-10-2018 Vc3S01_A1043 892e8c5a0dc81f196ad51e4d76cf1a12 244 SMART SM00382 32 215 9.5E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_A1043 892e8c5a0dc81f196ad51e4d76cf1a12 244 Pfam PF00005 ABC transporter 23 167 1.6E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_A1231 f0e98cb79bd945c77a8db89fc0b1c161 429 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 7 427 4.9E-117 T 12-10-2018 IPR010263 Type VI secretion protein, VC_A0114 Vc3S01_A1231 f0e98cb79bd945c77a8db89fc0b1c161 429 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 1 429 4.9E-129 T 12-10-2018 IPR010263 Type VI secretion protein, VC_A0114 Vc3S01_2339 dd215c384b85745eabbafb60f3fd8674 653 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 636 653 - T 12-10-2018 IPR010917 TonB-dependent receptor, conserved site Vc3S01_2339 dd215c384b85745eabbafb60f3fd8674 653 Pfam PF00593 TonB dependent receptor 272 651 5.6E-59 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Vc3S01_2339 dd215c384b85745eabbafb60f3fd8674 653 Gene3D G3DSA:2.170.130.10 34 165 2.9E-42 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Vc3S01_2339 dd215c384b85745eabbafb60f3fd8674 653 Gene3D G3DSA:2.40.170.20 172 653 1.1E-112 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Vc3S01_2339 dd215c384b85745eabbafb60f3fd8674 653 SUPERFAMILY SSF56935 37 653 1.12E-132 T 12-10-2018 Vc3S01_2339 dd215c384b85745eabbafb60f3fd8674 653 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 161 1.8E-29 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain Vc3S01_A2012 cd556e24c72656c4a94ca61ac0148cb6 683 SUPERFAMILY SSF51445 58 473 3.68E-79 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily Vc3S01_A2012 cd556e24c72656c4a94ca61ac0148cb6 683 PRINTS PR00133 Glycosyl hydrolase family 3 signature 161 177 4.3E-10 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Vc3S01_A2012 cd556e24c72656c4a94ca61ac0148cb6 683 PRINTS PR00133 Glycosyl hydrolase family 3 signature 194 213 4.3E-10 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Vc3S01_A2012 cd556e24c72656c4a94ca61ac0148cb6 683 PRINTS PR00133 Glycosyl hydrolase family 3 signature 240 256 4.3E-10 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Vc3S01_A2012 cd556e24c72656c4a94ca61ac0148cb6 683 PRINTS PR00133 Glycosyl hydrolase family 3 signature 277 293 4.3E-10 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Vc3S01_A2012 cd556e24c72656c4a94ca61ac0148cb6 683 PRINTS PR00133 Glycosyl hydrolase family 3 signature 358 376 4.3E-10 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Vc3S01_A2012 cd556e24c72656c4a94ca61ac0148cb6 683 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 474 682 8.6E-13 T 12-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 Vc3S01_A2012 cd556e24c72656c4a94ca61ac0148cb6 683 SUPERFAMILY SSF52279 474 682 1.57E-18 T 12-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 Vc3S01_A2012 cd556e24c72656c4a94ca61ac0148cb6 683 Gene3D G3DSA:3.40.50.1700 460 683 4.3E-20 T 12-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 Vc3S01_A2012 cd556e24c72656c4a94ca61ac0148cb6 683 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 142 434 8.2E-39 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Vc3S01_A2012 cd556e24c72656c4a94ca61ac0148cb6 683 Gene3D G3DSA:3.20.20.300 54 457 1.5E-94 T 12-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 Vc3S01_1399 1a16dbfd917003ad5d747a0a85e88ffd 193 Pfam PF06940 Domain of unknown function (DUF1287) 25 190 3.7E-65 T 12-10-2018 IPR009706 Protein of unknown function DUF1287 Vc3S01_1399 1a16dbfd917003ad5d747a0a85e88ffd 193 ProDom PD357862 YIJF PERIPLASMIC ECS4873 PRECURSOR CC1379 SIGNAL DOMAIN PM0035 18 190 1.0E-45 T 12-10-2018 IPR009706 Protein of unknown function DUF1287 Vc3S01_1399 1a16dbfd917003ad5d747a0a85e88ffd 193 PIRSF PIRSF011444 5 193 1.2E-70 T 12-10-2018 IPR009706 Protein of unknown function DUF1287 Vc3S01_2020 8dbfbae7e3a7538bb4671af94e89e97c 336 Pfam PF02954 Bacterial regulatory protein, Fis family 296 324 2.0E-6 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Vc3S01_2020 8dbfbae7e3a7538bb4671af94e89e97c 336 SUPERFAMILY SSF52540 4 238 2.34E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2020 8dbfbae7e3a7538bb4671af94e89e97c 336 Pfam PF00158 Sigma-54 interaction domain 5 167 2.0E-57 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Vc3S01_2020 8dbfbae7e3a7538bb4671af94e89e97c 336 SUPERFAMILY SSF46689 219 332 9.86E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_2020 8dbfbae7e3a7538bb4671af94e89e97c 336 Gene3D G3DSA:1.10.8.60 177 259 5.3E-26 T 12-10-2018 Vc3S01_2020 8dbfbae7e3a7538bb4671af94e89e97c 336 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 5 330 1.1E-165 T 12-10-2018 IPR014317 Transcription activator PspF Vc3S01_2020 8dbfbae7e3a7538bb4671af94e89e97c 336 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 313 333 8.1E-9 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Vc3S01_2020 8dbfbae7e3a7538bb4671af94e89e97c 336 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 296 313 8.1E-9 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Vc3S01_2020 8dbfbae7e3a7538bb4671af94e89e97c 336 Gene3D G3DSA:3.40.50.300 1 176 8.8E-58 T 12-10-2018 Vc3S01_2020 8dbfbae7e3a7538bb4671af94e89e97c 336 PRINTS PR00819 CbxX/CfqX superfamily signature 88 107 6.0E-5 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 Vc3S01_2020 8dbfbae7e3a7538bb4671af94e89e97c 336 PRINTS PR00819 CbxX/CfqX superfamily signature 1 7 6.0E-5 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 Vc3S01_2020 8dbfbae7e3a7538bb4671af94e89e97c 336 PRINTS PR00819 CbxX/CfqX superfamily signature 222 234 6.0E-5 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 Vc3S01_2020 8dbfbae7e3a7538bb4671af94e89e97c 336 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 91 106 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Vc3S01_2020 8dbfbae7e3a7538bb4671af94e89e97c 336 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 219 228 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Vc3S01_2020 8dbfbae7e3a7538bb4671af94e89e97c 336 SMART SM00382 25 177 1.3E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_2020 8dbfbae7e3a7538bb4671af94e89e97c 336 Gene3D G3DSA:1.10.10.60 262 333 1.5E-7 T 12-10-2018 Vc3S01_1988 bc806bfec822dfc16ccb53ada91ce23a 601 SUPERFAMILY SSF53850 51 277 4.29E-16 T 12-10-2018 Vc3S01_1988 bc806bfec822dfc16ccb53ada91ce23a 601 SMART SM00387 485 596 2.4E-19 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_1988 bc806bfec822dfc16ccb53ada91ce23a 601 Gene3D G3DSA:1.10.287.130 380 440 1.7E-16 T 12-10-2018 Vc3S01_1988 bc806bfec822dfc16ccb53ada91ce23a 601 Gene3D G3DSA:3.40.190.10 124 244 1.3E-18 T 12-10-2018 Vc3S01_1988 bc806bfec822dfc16ccb53ada91ce23a 601 Pfam PF00512 His Kinase A (phospho-acceptor) domain 376 437 1.1E-7 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_1988 bc806bfec822dfc16ccb53ada91ce23a 601 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 39 279 1.7E-33 T 12-10-2018 Vc3S01_1988 bc806bfec822dfc16ccb53ada91ce23a 601 Gene3D G3DSA:3.40.190.10 39 268 1.3E-18 T 12-10-2018 Vc3S01_1988 bc806bfec822dfc16ccb53ada91ce23a 601 SUPERFAMILY SSF47384 366 437 3.53E-8 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Vc3S01_1988 bc806bfec822dfc16ccb53ada91ce23a 601 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 486 594 5.1E-17 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_1988 bc806bfec822dfc16ccb53ada91ce23a 601 SMART SM00388 374 443 5.3E-6 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_1988 bc806bfec822dfc16ccb53ada91ce23a 601 SUPERFAMILY SSF55874 429 594 6.16E-32 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_1988 bc806bfec822dfc16ccb53ada91ce23a 601 Gene3D G3DSA:3.30.565.10 442 600 7.9E-30 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_1988 bc806bfec822dfc16ccb53ada91ce23a 601 PRINTS PR00344 Bacterial sensor protein C-terminal signature 580 593 1.3E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_1988 bc806bfec822dfc16ccb53ada91ce23a 601 PRINTS PR00344 Bacterial sensor protein C-terminal signature 556 574 1.3E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_1988 bc806bfec822dfc16ccb53ada91ce23a 601 PRINTS PR00344 Bacterial sensor protein C-terminal signature 528 542 1.3E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_A1662 694fce38ddb510d28cb729c6baa491b8 338 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 94 104 - T 12-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 Vc3S01_A1662 694fce38ddb510d28cb729c6baa491b8 338 PRINTS PR00139 Asparaginase/glutaminase family signature 272 290 1.2E-23 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 Vc3S01_A1662 694fce38ddb510d28cb729c6baa491b8 338 PRINTS PR00139 Asparaginase/glutaminase family signature 14 25 1.2E-23 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 Vc3S01_A1662 694fce38ddb510d28cb729c6baa491b8 338 PRINTS PR00139 Asparaginase/glutaminase family signature 93 111 1.2E-23 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 Vc3S01_A1662 694fce38ddb510d28cb729c6baa491b8 338 SMART SM00870 13 332 3.3E-149 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 Vc3S01_A1662 694fce38ddb510d28cb729c6baa491b8 338 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 16 24 - T 12-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 Vc3S01_A1662 694fce38ddb510d28cb729c6baa491b8 338 PIRSF PIRSF001220 8 338 4.6E-97 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 Vc3S01_A1662 694fce38ddb510d28cb729c6baa491b8 338 Gene3D G3DSA:3.40.50.40 225 338 4.4E-42 T 12-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 Vc3S01_A1662 694fce38ddb510d28cb729c6baa491b8 338 Gene3D G3DSA:3.40.50.1170 9 224 2.0E-87 T 12-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 Vc3S01_A1662 694fce38ddb510d28cb729c6baa491b8 338 SUPERFAMILY SSF53774 11 337 3.27E-109 T 12-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 Vc3S01_A1662 694fce38ddb510d28cb729c6baa491b8 338 TIGRFAM TIGR00520 asnASE_II: L-asparaginase, type II 6 338 7.4E-162 T 12-10-2018 IPR004550 L-asparaginase, type II GO:0004067|GO:0006528 Vc3S01_A1662 694fce38ddb510d28cb729c6baa491b8 338 PIRSF PIRSF500176 10 338 1.3E-83 T 12-10-2018 Vc3S01_A1662 694fce38ddb510d28cb729c6baa491b8 338 Pfam PF00710 Asparaginase, N-terminal 13 206 7.2E-63 T 12-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 Vc3S01_p30049 20611317f01a98a45411d80bd18fee74 797 Pfam PF04851 Type III restriction enzyme, res subunit 165 353 4.3E-38 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Vc3S01_p30049 20611317f01a98a45411d80bd18fee74 797 Gene3D G3DSA:3.40.50.300 368 614 1.2E-49 T 12-10-2018 Vc3S01_p30049 20611317f01a98a45411d80bd18fee74 797 Gene3D G3DSA:3.90.1570.30 2 141 7.9E-9 T 12-10-2018 Vc3S01_p30049 20611317f01a98a45411d80bd18fee74 797 Gene3D G3DSA:3.40.50.300 155 366 5.0E-43 T 12-10-2018 Vc3S01_p30049 20611317f01a98a45411d80bd18fee74 797 SMART SM00487 163 381 1.3E-18 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Vc3S01_p30049 20611317f01a98a45411d80bd18fee74 797 SUPERFAMILY SSF52540 188 573 1.48E-11 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_p30049 20611317f01a98a45411d80bd18fee74 797 SUPERFAMILY SSF52540 151 397 7.87E-30 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_1141 1a5f11a052a6f996cbfac77e8302e4f8 170 Pfam PF00085 Thioredoxin 51 159 3.1E-11 T 12-10-2018 IPR013766 Thioredoxin domain GO:0045454 Vc3S01_1141 1a5f11a052a6f996cbfac77e8302e4f8 170 ProSitePatterns PS00194 Thioredoxin family active site. 69 87 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Vc3S01_1141 1a5f11a052a6f996cbfac77e8302e4f8 170 Gene3D G3DSA:3.40.30.10 26 167 4.1E-20 T 12-10-2018 Vc3S01_1141 1a5f11a052a6f996cbfac77e8302e4f8 170 SUPERFAMILY SSF52833 41 162 1.99E-24 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Vc3S01_3044 f11550f6e26a298ef5a46e003fce634f 773 SUPERFAMILY SSF47781 560 632 4.22E-18 T 12-10-2018 IPR010994 RuvA domain 2-like Vc3S01_3044 f11550f6e26a298ef5a46e003fce634f 773 Gene3D G3DSA:1.10.3500.10 112 498 6.6E-157 T 12-10-2018 IPR023323 Tex-like domain superfamily Vc3S01_3044 f11550f6e26a298ef5a46e003fce634f 773 Gene3D G3DSA:2.40.50.140 631 725 6.1E-29 T 12-10-2018 Vc3S01_3044 f11550f6e26a298ef5a46e003fce634f 773 Gene3D G3DSA:3.30.420.140 325 451 6.6E-157 T 12-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 Vc3S01_3044 f11550f6e26a298ef5a46e003fce634f 773 SMART SM00732 326 424 2.5E-38 T 12-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 Vc3S01_3044 f11550f6e26a298ef5a46e003fce634f 773 SUPERFAMILY SSF50249 638 723 2.46E-24 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Vc3S01_3044 f11550f6e26a298ef5a46e003fce634f 773 Pfam PF00575 S1 RNA binding domain 649 720 7.4E-21 T 12-10-2018 IPR003029 S1 domain GO:0003676 Vc3S01_3044 f11550f6e26a298ef5a46e003fce634f 773 SUPERFAMILY SSF158832 3 321 1.7E-120 T 12-10-2018 Vc3S01_3044 f11550f6e26a298ef5a46e003fce634f 773 SMART SM00316 649 720 1.2E-24 T 12-10-2018 IPR022967 RNA-binding domain, S1 Vc3S01_3044 f11550f6e26a298ef5a46e003fce634f 773 Gene3D G3DSA:1.10.150.310 499 630 6.4E-49 T 12-10-2018 Vc3S01_3044 f11550f6e26a298ef5a46e003fce634f 773 SUPERFAMILY SSF47781 470 557 1.45E-26 T 12-10-2018 IPR010994 RuvA domain 2-like Vc3S01_3044 f11550f6e26a298ef5a46e003fce634f 773 Pfam PF09371 Tex-like protein N-terminal domain 9 191 1.5E-71 T 12-10-2018 IPR018974 Tex-like protein, N-terminal Vc3S01_3044 f11550f6e26a298ef5a46e003fce634f 773 Pfam PF12836 Helix-hairpin-helix motif 491 555 2.8E-27 T 12-10-2018 Vc3S01_3044 f11550f6e26a298ef5a46e003fce634f 773 SUPERFAMILY SSF53098 322 469 5.92E-51 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Vc3S01_3044 f11550f6e26a298ef5a46e003fce634f 773 Pfam PF16921 Tex protein YqgF-like domain 327 451 8.9E-56 T 12-10-2018 IPR032639 Tex protein, YqgF-like domain Vc3S01_3044 f11550f6e26a298ef5a46e003fce634f 773 Gene3D G3DSA:1.10.10.650 2 109 3.0E-42 T 12-10-2018 IPR023319 Tex-like protein, HTH domain superfamily Vc3S01_A0596 9e33a7339e66175c3499104fc2738e61 60 Pfam PF01219 Prokaryotic diacylglycerol kinase 1 59 6.2E-22 T 12-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 Vc3S01_A0596 9e33a7339e66175c3499104fc2738e61 60 Gene3D G3DSA:1.10.3830.10 1 60 7.8E-22 T 12-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 Vc3S01_A0596 9e33a7339e66175c3499104fc2738e61 60 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 12 23 - T 12-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 Vc3S01_2444 ec124c4d33c6da6954b4578051c4a5f1 527 TIGRFAM TIGR03369 cellulose_bcsE: cellulose biosynthesis protein BcsE 160 480 7.0E-99 T 12-10-2018 IPR017745 BcsE, GIL domain GO:0035438 Vc3S01_2444 ec124c4d33c6da6954b4578051c4a5f1 527 Pfam PF10995 GGDEF I-site like or GIL domain 166 479 3.5E-102 T 12-10-2018 IPR017745 BcsE, GIL domain GO:0035438 Vc3S01_A1034 0bd24b756f423ba22be7fa4ee6e41b8d 324 Gene3D G3DSA:3.40.1190.20 6 315 8.4E-97 T 12-10-2018 IPR029056 Ribokinase-like Vc3S01_A1034 0bd24b756f423ba22be7fa4ee6e41b8d 324 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 9 312 1.5E-103 T 12-10-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 Vc3S01_A1034 0bd24b756f423ba22be7fa4ee6e41b8d 324 Pfam PF00294 pfkB family carbohydrate kinase 30 298 3.0E-52 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB Vc3S01_A1034 0bd24b756f423ba22be7fa4ee6e41b8d 324 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 43 67 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 Vc3S01_A1034 0bd24b756f423ba22be7fa4ee6e41b8d 324 PIRSF PIRSF000535 6 315 1.0E-97 T 12-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 Vc3S01_A1034 0bd24b756f423ba22be7fa4ee6e41b8d 324 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 9 312 3.3E-103 T 12-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 Vc3S01_A1034 0bd24b756f423ba22be7fa4ee6e41b8d 324 SUPERFAMILY SSF53613 10 297 3.12E-70 T 12-10-2018 IPR029056 Ribokinase-like Vc3S01_A1054 80b283177b355a9f1836a36b87e2c778 222 Gene3D G3DSA:1.10.150.240 21 88 8.5E-43 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Vc3S01_A1054 80b283177b355a9f1836a36b87e2c778 222 SUPERFAMILY SSF56784 5 218 6.67E-46 T 12-10-2018 IPR036412 HAD-like superfamily Vc3S01_A1054 80b283177b355a9f1836a36b87e2c778 222 Gene3D G3DSA:3.40.50.1000 9 193 8.5E-43 T 12-10-2018 IPR023214 HAD superfamily Vc3S01_A1054 80b283177b355a9f1836a36b87e2c778 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 188 7.2E-30 T 12-10-2018 Vc3S01_A1054 80b283177b355a9f1836a36b87e2c778 222 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 77 189 4.6E-11 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Vc3S01_A1054 80b283177b355a9f1836a36b87e2c778 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 134 150 9.3E-6 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Vc3S01_A1054 80b283177b355a9f1836a36b87e2c778 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 102 115 9.3E-6 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Vc3S01_A1054 80b283177b355a9f1836a36b87e2c778 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 6 17 9.3E-6 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Vc3S01_A1054 80b283177b355a9f1836a36b87e2c778 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 152 172 9.3E-6 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Vc3S01_A1798 78ca3c9766c46b238ff125d3f51884b8 812 ProSitePatterns PS00850 Glycine radical domain signature. 783 791 - T 12-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site Vc3S01_A1798 78ca3c9766c46b238ff125d3f51884b8 812 TIGRFAM TIGR01774 PFL2-3: glycyl radical enzyme, PFL2/glycerol dehydratase family 6 812 0.0 T 12-10-2018 IPR010098 Glycyl radical enzyme, PFL2/glycerol dehydratase family KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 Vc3S01_A1798 78ca3c9766c46b238ff125d3f51884b8 812 SUPERFAMILY SSF51998 3 811 6.71E-221 T 12-10-2018 Vc3S01_A1798 78ca3c9766c46b238ff125d3f51884b8 812 PIRSF PIRSF000379 28 812 1.0E-166 T 12-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 Vc3S01_A1798 78ca3c9766c46b238ff125d3f51884b8 812 Pfam PF01228 Glycine radical 690 793 5.1E-31 T 12-10-2018 IPR001150 Glycine radical domain GO:0003824 Vc3S01_A1798 78ca3c9766c46b238ff125d3f51884b8 812 Pfam PF02901 Pyruvate formate lyase-like 8 673 4.5E-213 T 12-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 Vc3S01_A1798 78ca3c9766c46b238ff125d3f51884b8 812 Gene3D G3DSA:3.20.70.20 7 812 4.4E-272 T 12-10-2018 Vc3S01_0151 55aac473694388ea7bad9cf3a49310b5 347 Gene3D G3DSA:3.90.78.10 223 347 1.7E-41 T 12-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Vc3S01_0151 55aac473694388ea7bad9cf3a49310b5 347 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 9 332 1.6E-92 T 12-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Vc3S01_0151 55aac473694388ea7bad9cf3a49310b5 347 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 210 331 1.0E-30 T 12-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Vc3S01_0151 55aac473694388ea7bad9cf3a49310b5 347 SUPERFAMILY SSF56176 8 197 1.58E-40 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Vc3S01_0151 55aac473694388ea7bad9cf3a49310b5 347 SUPERFAMILY SSF56194 206 341 6.54E-47 T 12-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Vc3S01_0151 55aac473694388ea7bad9cf3a49310b5 347 Gene3D G3DSA:3.30.465.10 73 222 8.8E-51 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Vc3S01_0151 55aac473694388ea7bad9cf3a49310b5 347 Gene3D G3DSA:3.30.43.10 1 72 9.0E-20 T 12-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 Vc3S01_0151 55aac473694388ea7bad9cf3a49310b5 347 Pfam PF01565 FAD binding domain 23 143 6.6E-17 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Vc3S01_0151 55aac473694388ea7bad9cf3a49310b5 347 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 347 80.49 T 12-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Vc3S01_2618 ad9210fd04931ca7f33f48a3078e0bce 566 Gene3D G3DSA:1.10.530.10 105 346 6.1E-77 T 12-10-2018 Vc3S01_2618 ad9210fd04931ca7f33f48a3078e0bce 566 Pfam PF00182 Chitinase class I 106 325 1.2E-30 T 12-10-2018 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 Vc3S01_2618 ad9210fd04931ca7f33f48a3078e0bce 566 SUPERFAMILY SSF53955 87 350 1.38E-53 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily Vc3S01_2618 ad9210fd04931ca7f33f48a3078e0bce 566 Gene3D G3DSA:2.10.10.20 434 480 1.6E-15 T 12-10-2018 Vc3S01_2618 ad9210fd04931ca7f33f48a3078e0bce 566 SMART SM00495 518 563 0.63 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 Vc3S01_2618 ad9210fd04931ca7f33f48a3078e0bce 566 SMART SM00495 436 478 9.9E-18 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 Vc3S01_2618 ad9210fd04931ca7f33f48a3078e0bce 566 Gene3D G3DSA:3.30.20.10 178 248 6.1E-77 T 12-10-2018 Vc3S01_2618 ad9210fd04931ca7f33f48a3078e0bce 566 SUPERFAMILY SSF51055 430 479 8.37E-17 T 12-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 Vc3S01_0219 1aacc99d68a55f38a625f224dca7cfba 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 24.282 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Vc3S01_0219 1aacc99d68a55f38a625f224dca7cfba 96 SMART SM00883 2 95 5.2E-50 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Vc3S01_0219 1aacc99d68a55f38a625f224dca7cfba 96 SUPERFAMILY SSF50129 1 96 2.24E-31 T 12-10-2018 IPR011032 GroES-like superfamily Vc3S01_0219 1aacc99d68a55f38a625f224dca7cfba 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 12-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 Vc3S01_0219 1aacc99d68a55f38a625f224dca7cfba 96 Gene3D G3DSA:2.30.33.40 1 96 2.6E-36 T 12-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 Vc3S01_0219 1aacc99d68a55f38a625f224dca7cfba 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 95 1.7E-31 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Vc3S01_0219 1aacc99d68a55f38a625f224dca7cfba 96 PRINTS PR00297 10kDa chaperonin signature 25 46 3.7E-27 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Vc3S01_0219 1aacc99d68a55f38a625f224dca7cfba 96 PRINTS PR00297 10kDa chaperonin signature 3 18 3.7E-27 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Vc3S01_0219 1aacc99d68a55f38a625f224dca7cfba 96 PRINTS PR00297 10kDa chaperonin signature 60 72 3.7E-27 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Vc3S01_0219 1aacc99d68a55f38a625f224dca7cfba 96 PRINTS PR00297 10kDa chaperonin signature 82 95 3.7E-27 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Vc3S01_2583 4c450c0d432588de98ccbc02906fa6b5 534 Gene3D G3DSA:1.10.530.10 302 483 2.4E-34 T 12-10-2018 Vc3S01_2583 4c450c0d432588de98ccbc02906fa6b5 534 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 8 485 48.598 T 12-10-2018 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 Vc3S01_2583 4c450c0d432588de98ccbc02906fa6b5 534 Gene3D G3DSA:3.40.190.10 128 241 1.7E-71 T 12-10-2018 Vc3S01_2583 4c450c0d432588de98ccbc02906fa6b5 534 SMART SM00062 43 285 1.7E-23 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Vc3S01_2583 4c450c0d432588de98ccbc02906fa6b5 534 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 284 3.9E-28 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Vc3S01_2583 4c450c0d432588de98ccbc02906fa6b5 534 Pfam PF01464 Transglycosylase SLT domain 315 418 1.1E-20 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 Vc3S01_2583 4c450c0d432588de98ccbc02906fa6b5 534 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 326 354 - T 12-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 Vc3S01_2583 4c450c0d432588de98ccbc02906fa6b5 534 SUPERFAMILY SSF53850 44 284 2.23E-31 T 12-10-2018 Vc3S01_2583 4c450c0d432588de98ccbc02906fa6b5 534 Gene3D G3DSA:3.40.190.10 37 280 1.7E-71 T 12-10-2018 Vc3S01_2583 4c450c0d432588de98ccbc02906fa6b5 534 SUPERFAMILY SSF53955 262 467 2.81E-36 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily Vc3S01_1625 0cdbc36a2739d5d9cc566a25702acec7 501 SUPERFAMILY SSF53335 29 331 1.23E-62 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Vc3S01_1625 0cdbc36a2739d5d9cc566a25702acec7 501 TIGRFAM TIGR00446 nop2p: NOL1/NOP2/sun family putative RNA methylase 63 331 8.6E-102 T 12-10-2018 IPR011023 Nop2p GO:0003723|GO:0006364|GO:0008757 Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 Vc3S01_1625 0cdbc36a2739d5d9cc566a25702acec7 501 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 210 222 1.6E-27 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Vc3S01_1625 0cdbc36a2739d5d9cc566a25702acec7 501 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 314 331 1.6E-27 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Vc3S01_1625 0cdbc36a2739d5d9cc566a25702acec7 501 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 260 276 1.6E-27 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Vc3S01_1625 0cdbc36a2739d5d9cc566a25702acec7 501 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 112 126 1.6E-27 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Vc3S01_1625 0cdbc36a2739d5d9cc566a25702acec7 501 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 143 153 1.6E-27 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Vc3S01_1625 0cdbc36a2739d5d9cc566a25702acec7 501 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 30 126 1.9E-29 T 12-10-2018 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 Vc3S01_1625 0cdbc36a2739d5d9cc566a25702acec7 501 Pfam PF13636 RNA-binding PUA-like domain of methyltransferase RsmF 455 496 4.4E-9 T 12-10-2018 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain Vc3S01_1625 0cdbc36a2739d5d9cc566a25702acec7 501 Gene3D G3DSA:2.30.130.90 332 501 2.8E-66 T 12-10-2018 Vc3S01_1625 0cdbc36a2739d5d9cc566a25702acec7 501 Hamap MF_01579 Ribosomal RNA small subunit methyltransferase F [rsmF]. 28 501 66.189 T 12-10-2018 IPR023545 rRNA small subunit methyltransferase F GO:0008649 Vc3S01_1625 0cdbc36a2739d5d9cc566a25702acec7 501 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 209 220 - T 12-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 Vc3S01_1625 0cdbc36a2739d5d9cc566a25702acec7 501 Pfam PF01189 16S rRNA methyltransferase RsmB/F 134 329 6.8E-49 T 12-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 Vc3S01_1625 0cdbc36a2739d5d9cc566a25702acec7 501 Gene3D G3DSA:3.40.50.150 25 331 8.9E-99 T 12-10-2018 Vc3S01_0255 1530c43b16203729ef8a65462709f715 326 TIGRFAM TIGR01932 hflC: HflC protein 1 318 4.7E-135 T 12-10-2018 IPR010200 HflC GO:0016021|GO:0052547 Vc3S01_0255 1530c43b16203729ef8a65462709f715 326 PIRSF PIRSF005651 1 326 1.2E-96 T 12-10-2018 IPR010200 HflC GO:0016021|GO:0052547 Vc3S01_0255 1530c43b16203729ef8a65462709f715 326 SMART SM00244 18 218 6.7E-48 T 12-10-2018 IPR001107 Band 7 domain Vc3S01_0255 1530c43b16203729ef8a65462709f715 326 SUPERFAMILY SSF117892 56 223 3.27E-23 T 12-10-2018 IPR036013 Band 7/SPFH domain superfamily Vc3S01_0255 1530c43b16203729ef8a65462709f715 326 Pfam PF01145 SPFH domain / Band 7 family 22 243 1.5E-31 T 12-10-2018 IPR001107 Band 7 domain Vc3S01_0046 3919e890d440bb5562f1f800de835824 207 Gene3D G3DSA:3.30.230.30 3 136 9.7E-50 T 12-10-2018 IPR036956 Impact, N-terminal domain superfamily Vc3S01_0046 3919e890d440bb5562f1f800de835824 207 Pfam PF09186 Domain of unknown function (DUF1949) 143 196 2.1E-12 T 12-10-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal Vc3S01_0046 3919e890d440bb5562f1f800de835824 207 SUPERFAMILY SSF54980 139 204 6.62E-10 T 12-10-2018 IPR035647 EF-G domain III/V-like Vc3S01_0046 3919e890d440bb5562f1f800de835824 207 SUPERFAMILY SSF54211 5 134 6.07E-42 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Vc3S01_0046 3919e890d440bb5562f1f800de835824 207 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 6 200 1.0E-66 T 12-10-2018 IPR015796 Impact family, bacterial/archaeal Vc3S01_0046 3919e890d440bb5562f1f800de835824 207 Pfam PF01205 Uncharacterized protein family UPF0029 20 127 4.1E-26 T 12-10-2018 IPR001498 Impact, N-terminal Vc3S01_1947 3b9e436f897fe2eb5aaae2c42447321d 306 SUPERFAMILY SSF109604 24 300 9.73E-38 T 12-10-2018 Vc3S01_1947 3b9e436f897fe2eb5aaae2c42447321d 306 Pfam PF08668 HDOD domain 39 233 2.0E-35 T 12-10-2018 IPR013976 Metal-dependent hydrolase HDOD Vc3S01_1947 3b9e436f897fe2eb5aaae2c42447321d 306 Gene3D G3DSA:1.10.3210.10 19 299 1.7E-38 T 12-10-2018 Vc3S01_1119 3651e6347afd8d8b9db4d6fbe72bc1e0 467 SUPERFAMILY SSF56672 5 225 1.67E-33 T 12-10-2018 Vc3S01_1119 3651e6347afd8d8b9db4d6fbe72bc1e0 467 Gene3D G3DSA:3.30.70.270 69 166 3.3E-8 T 12-10-2018 Vc3S01_1119 3651e6347afd8d8b9db4d6fbe72bc1e0 467 Gene3D G3DSA:2.30.40.20 27 68 3.3E-8 T 12-10-2018 Vc3S01_1119 3651e6347afd8d8b9db4d6fbe72bc1e0 467 Pfam PF00817 impB/mucB/samB family 23 146 2.1E-7 T 12-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Vc3S01_1119 3651e6347afd8d8b9db4d6fbe72bc1e0 467 Gene3D G3DSA:1.10.150.20 167 207 3.3E-8 T 12-10-2018 Vc3S01_A0654 6bb6191c9bc4b6f6b18421f7929f4e9b 477 SUPERFAMILY SSF55347 288 451 1.25E-52 T 12-10-2018 Vc3S01_A0654 6bb6191c9bc4b6f6b18421f7929f4e9b 477 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 128 238 3.5E-21 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_A0654 6bb6191c9bc4b6f6b18421f7929f4e9b 477 SUPERFAMILY SSF51735 128 304 1.16E-43 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_A0654 6bb6191c9bc4b6f6b18421f7929f4e9b 477 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 286 293 - T 12-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_A0654 6bb6191c9bc4b6f6b18421f7929f4e9b 477 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 129 462 6.6E-113 T 12-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_A0654 6bb6191c9bc4b6f6b18421f7929f4e9b 477 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 282 300 1.4E-17 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_A0654 6bb6191c9bc4b6f6b18421f7929f4e9b 477 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 309 325 1.4E-17 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_A0654 6bb6191c9bc4b6f6b18421f7929f4e9b 477 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 365 382 1.4E-17 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_A0654 6bb6191c9bc4b6f6b18421f7929f4e9b 477 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 246 259 1.4E-17 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_A0654 6bb6191c9bc4b6f6b18421f7929f4e9b 477 SMART SM00846 127 288 1.1E-49 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_A0654 6bb6191c9bc4b6f6b18421f7929f4e9b 477 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 293 450 1.3E-44 T 12-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_A0654 6bb6191c9bc4b6f6b18421f7929f4e9b 477 Gene3D G3DSA:3.30.360.10 287 452 1.2E-113 T 12-10-2018 Vc3S01_A0654 6bb6191c9bc4b6f6b18421f7929f4e9b 477 Gene3D G3DSA:3.40.50.720 129 462 1.2E-113 T 12-10-2018 Vc3S01_A1951 58324c5742d68906a720fb4e8d7c291b 916 Gene3D G3DSA:3.30.830.10 257 466 2.7E-8 T 12-10-2018 Vc3S01_A1951 58324c5742d68906a720fb4e8d7c291b 916 Pfam PF05193 Peptidase M16 inactive domain 669 847 4.8E-10 T 12-10-2018 IPR007863 Peptidase M16, C-terminal Vc3S01_A1951 58324c5742d68906a720fb4e8d7c291b 916 Pfam PF05193 Peptidase M16 inactive domain 202 373 1.0E-15 T 12-10-2018 IPR007863 Peptidase M16, C-terminal Vc3S01_A1951 58324c5742d68906a720fb4e8d7c291b 916 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 60 83 - T 12-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 Vc3S01_A1951 58324c5742d68906a720fb4e8d7c291b 916 Pfam PF00675 Insulinase (Peptidase family M16) 47 161 9.8E-25 T 12-10-2018 IPR011765 Peptidase M16, N-terminal Vc3S01_A1951 58324c5742d68906a720fb4e8d7c291b 916 Gene3D G3DSA:3.30.830.10 506 714 5.4E-11 T 12-10-2018 Vc3S01_A1951 58324c5742d68906a720fb4e8d7c291b 916 SUPERFAMILY SSF63411 501 712 4.37E-22 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Vc3S01_A1951 58324c5742d68906a720fb4e8d7c291b 916 SUPERFAMILY SSF63411 744 911 1.75E-13 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Vc3S01_A1951 58324c5742d68906a720fb4e8d7c291b 916 SUPERFAMILY SSF63411 25 239 1.64E-45 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Vc3S01_A1951 58324c5742d68906a720fb4e8d7c291b 916 Gene3D G3DSA:3.30.830.10 28 249 4.0E-60 T 12-10-2018 Vc3S01_A1951 58324c5742d68906a720fb4e8d7c291b 916 Gene3D G3DSA:3.30.830.10 733 916 5.8E-13 T 12-10-2018 Vc3S01_A1125 06caaca850ed234f1ee22627ce2d9709 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 24 213 9.6E-21 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Vc3S01_A1125 06caaca850ed234f1ee22627ce2d9709 229 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 10 219 8.5E-73 T 12-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 Vc3S01_A1125 06caaca850ed234f1ee22627ce2d9709 229 Gene3D G3DSA:1.10.3720.10 3 224 4.8E-59 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_A1125 06caaca850ed234f1ee22627ce2d9709 229 SUPERFAMILY SSF161098 6 217 1.23E-48 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_2888 05220da0f13580d2811e179781e8fe29 176 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 12-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 Vc3S01_2888 05220da0f13580d2811e179781e8fe29 176 Gene3D G3DSA:3.90.80.10 1 175 1.0E-65 T 12-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 Vc3S01_2888 05220da0f13580d2811e179781e8fe29 176 Pfam PF00719 Inorganic pyrophosphatase 18 173 3.6E-50 T 12-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 Vc3S01_2888 05220da0f13580d2811e179781e8fe29 176 SUPERFAMILY SSF50324 3 174 4.06E-63 T 12-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 Vc3S01_2888 05220da0f13580d2811e179781e8fe29 176 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 35.344 T 12-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 Vc3S01_1570 661960dff3ddde526670652dadb26035 160 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 11 141 1.6E-30 T 12-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN Vc3S01_1570 661960dff3ddde526670652dadb26035 160 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 6 142 4.6E-31 T 12-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN Vc3S01_1570 661960dff3ddde526670652dadb26035 160 Gene3D G3DSA:2.60.40.4150 23 152 1.6E-27 T 12-10-2018 IPR038706 Type VI secretion protein SciN-like superfamily Vc3S01_1935 943ec5bdaab98dabc01d78d7b9f73f05 315 SMART SM00530 5 68 3.7E-7 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Vc3S01_1935 943ec5bdaab98dabc01d78d7b9f73f05 315 Pfam PF01381 Helix-turn-helix 6 63 1.9E-8 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Vc3S01_1935 943ec5bdaab98dabc01d78d7b9f73f05 315 Gene3D G3DSA:1.10.260.40 1 66 6.7E-12 T 12-10-2018 Vc3S01_1935 943ec5bdaab98dabc01d78d7b9f73f05 315 SUPERFAMILY SSF47413 1 72 5.07E-10 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Vc3S01_A0302 4739ff1f5c5bebdf5c53b4bd2788b0e4 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 1.8E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A0302 4739ff1f5c5bebdf5c53b4bd2788b0e4 289 Gene3D G3DSA:3.40.190.10 162 260 1.7E-43 T 12-10-2018 Vc3S01_A0302 4739ff1f5c5bebdf5c53b4bd2788b0e4 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 3.7E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A0302 4739ff1f5c5bebdf5c53b4bd2788b0e4 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 3.7E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A0302 4739ff1f5c5bebdf5c53b4bd2788b0e4 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 3.7E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A0302 4739ff1f5c5bebdf5c53b4bd2788b0e4 289 Pfam PF03466 LysR substrate binding domain 89 288 2.4E-27 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_A0302 4739ff1f5c5bebdf5c53b4bd2788b0e4 289 Gene3D G3DSA:3.40.190.10 102 285 1.7E-43 T 12-10-2018 Vc3S01_A0302 4739ff1f5c5bebdf5c53b4bd2788b0e4 289 SUPERFAMILY SSF53850 92 288 1.61E-29 T 12-10-2018 Vc3S01_A0302 4739ff1f5c5bebdf5c53b4bd2788b0e4 289 SUPERFAMILY SSF46785 3 85 6.53E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A0302 4739ff1f5c5bebdf5c53b4bd2788b0e4 289 Gene3D G3DSA:1.10.10.10 6 90 1.3E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A1467 f7cbdf48e52bb6288fe2de8bb9c889c5 276 Gene3D G3DSA:3.40.250.10 155 276 2.2E-42 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily Vc3S01_A1467 f7cbdf48e52bb6288fe2de8bb9c889c5 276 Gene3D G3DSA:3.40.250.10 1 141 1.2E-37 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily Vc3S01_A1467 f7cbdf48e52bb6288fe2de8bb9c889c5 276 SUPERFAMILY SSF52821 3 136 4.85E-31 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily Vc3S01_A1467 f7cbdf48e52bb6288fe2de8bb9c889c5 276 Pfam PF00581 Rhodanese-like domain 6 124 1.2E-11 T 12-10-2018 IPR001763 Rhodanese-like domain Vc3S01_A1467 f7cbdf48e52bb6288fe2de8bb9c889c5 276 Pfam PF00581 Rhodanese-like domain 154 268 3.7E-12 T 12-10-2018 IPR001763 Rhodanese-like domain Vc3S01_A1467 f7cbdf48e52bb6288fe2de8bb9c889c5 276 SMART SM00450 152 272 1.6E-17 T 12-10-2018 IPR001763 Rhodanese-like domain Vc3S01_A1467 f7cbdf48e52bb6288fe2de8bb9c889c5 276 SMART SM00450 5 128 1.5E-15 T 12-10-2018 IPR001763 Rhodanese-like domain Vc3S01_A1467 f7cbdf48e52bb6288fe2de8bb9c889c5 276 SUPERFAMILY SSF52821 155 275 7.6E-35 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily Vc3S01_0059 adfa0c5e9c1a187608f1cef3db086670 596 Gene3D G3DSA:3.90.230.10 300 593 9.6E-95 T 12-10-2018 Vc3S01_0059 adfa0c5e9c1a187608f1cef3db086670 596 SUPERFAMILY SSF53092 6 131 7.5E-21 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Vc3S01_0059 adfa0c5e9c1a187608f1cef3db086670 596 Pfam PF16188 C-terminal region of peptidase_M24 534 592 3.6E-22 T 12-10-2018 IPR032416 Peptidase M24, C-terminal domain Vc3S01_0059 adfa0c5e9c1a187608f1cef3db086670 596 Gene3D G3DSA:3.40.350.10 147 292 1.8E-24 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Vc3S01_0059 adfa0c5e9c1a187608f1cef3db086670 596 SUPERFAMILY SSF55920 303 559 3.93E-56 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like Vc3S01_0059 adfa0c5e9c1a187608f1cef3db086670 596 Pfam PF16189 Creatinase/Prolidase N-terminal domain 148 306 2.1E-35 T 12-10-2018 Vc3S01_0059 adfa0c5e9c1a187608f1cef3db086670 596 Pfam PF01321 Creatinase/Prolidase N-terminal domain 8 134 3.9E-20 T 12-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 Vc3S01_0059 adfa0c5e9c1a187608f1cef3db086670 596 Pfam PF00557 Metallopeptidase family M24 309 524 1.8E-43 T 12-10-2018 IPR000994 Peptidase M24 Vc3S01_0059 adfa0c5e9c1a187608f1cef3db086670 596 Gene3D G3DSA:3.40.350.10 1 146 8.5E-36 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Vc3S01_A0479 70d4e5abd1ccc671fcc60dc978bb8036 446 Gene3D G3DSA:2.40.30.170 339 422 3.7E-16 T 12-10-2018 Vc3S01_A0479 70d4e5abd1ccc671fcc60dc978bb8036 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 314 335 3.8E-40 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Vc3S01_A0479 70d4e5abd1ccc671fcc60dc978bb8036 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 425 445 3.8E-40 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Vc3S01_A0479 70d4e5abd1ccc671fcc60dc978bb8036 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 347 371 3.8E-40 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Vc3S01_A0479 70d4e5abd1ccc671fcc60dc978bb8036 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 371 394 3.8E-40 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Vc3S01_A0479 70d4e5abd1ccc671fcc60dc978bb8036 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 39 62 3.8E-40 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Vc3S01_A0479 70d4e5abd1ccc671fcc60dc978bb8036 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 81 101 3.8E-40 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Vc3S01_A0479 70d4e5abd1ccc671fcc60dc978bb8036 446 Pfam PF13437 HlyD family secretion protein 302 408 2.4E-17 T 12-10-2018 Vc3S01_A0479 70d4e5abd1ccc671fcc60dc978bb8036 446 Pfam PF13533 Biotin-lipoyl like 79 112 5.6E-6 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain Vc3S01_A0479 70d4e5abd1ccc671fcc60dc978bb8036 446 Gene3D G3DSA:1.10.287.470 224 301 3.7E-16 T 12-10-2018 Vc3S01_A0479 70d4e5abd1ccc671fcc60dc978bb8036 446 Gene3D G3DSA:2.40.50.100 302 338 3.7E-16 T 12-10-2018 Vc3S01_A0479 70d4e5abd1ccc671fcc60dc978bb8036 446 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 31 446 2.6E-100 T 12-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 Vc3S01_A0479 70d4e5abd1ccc671fcc60dc978bb8036 446 Gene3D G3DSA:2.40.50.100 78 103 2.5E-6 T 12-10-2018 Vc3S01_A0479 70d4e5abd1ccc671fcc60dc978bb8036 446 SUPERFAMILY SSF111369 72 128 4.71E-5 T 12-10-2018 Vc3S01_A0479 70d4e5abd1ccc671fcc60dc978bb8036 446 Gene3D G3DSA:1.10.287.470 104 134 2.5E-6 T 12-10-2018 Vc3S01_A1643 ee2d6a39765d3003b4c631f1f273bd51 289 Pfam PF00753 Metallo-beta-lactamase superfamily 38 220 4.5E-8 T 12-10-2018 IPR001279 Metallo-beta-lactamase Vc3S01_A1643 ee2d6a39765d3003b4c631f1f273bd51 289 Gene3D G3DSA:3.60.15.10 19 256 2.4E-27 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Vc3S01_A1643 ee2d6a39765d3003b4c631f1f273bd51 289 SMART SM00849 38 220 5.5E-18 T 12-10-2018 IPR001279 Metallo-beta-lactamase Vc3S01_A1643 ee2d6a39765d3003b4c631f1f273bd51 289 SUPERFAMILY SSF56281 24 244 5.22E-39 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Vc3S01_A1515 fbf1fefd059b5bb79d2c1fa1198729fc 244 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 46 212 2.8E-7 T 12-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 Vc3S01_A1515 fbf1fefd059b5bb79d2c1fa1198729fc 244 Gene3D G3DSA:3.40.50.300 62 242 2.3E-42 T 12-10-2018 Vc3S01_A1515 fbf1fefd059b5bb79d2c1fa1198729fc 244 Gene3D G3DSA:3.40.50.300 19 61 9.4E-6 T 12-10-2018 Vc3S01_A1515 fbf1fefd059b5bb79d2c1fa1198729fc 244 SUPERFAMILY SSF52540 22 226 6.71E-29 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A0400 c172aa592aceb797082fbbe794de33be 466 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 267 286 - T 12-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site Vc3S01_A0400 c172aa592aceb797082fbbe794de33be 466 Gene3D G3DSA:3.90.1150.10 70 455 1.3E-73 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Vc3S01_A0400 c172aa592aceb797082fbbe794de33be 466 SUPERFAMILY SSF53383 60 462 5.17E-68 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Vc3S01_A0400 c172aa592aceb797082fbbe794de33be 466 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 12 39 7.1E-4 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Vc3S01_A0400 c172aa592aceb797082fbbe794de33be 466 Pfam PF00266 Aminotransferase class-V 115 396 2.0E-33 T 12-10-2018 IPR000192 Aminotransferase class V domain Vc3S01_A0400 c172aa592aceb797082fbbe794de33be 466 Gene3D G3DSA:3.40.640.10 83 353 1.3E-73 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Vc3S01_A1626 c724b535046b65171ed0165f12ece9b5 264 SUPERFAMILY SSF81345 40 237 1.26E-10 T 12-10-2018 IPR037294 ABC transporter, BtuC-like Vc3S01_A1626 c724b535046b65171ed0165f12ece9b5 264 Pfam PF00950 ABC 3 transport family 4 155 3.4E-7 T 12-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 Vc3S01_A1626 c724b535046b65171ed0165f12ece9b5 264 Pfam PF00950 ABC 3 transport family 164 240 2.8E-7 T 12-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 Vc3S01_2937 4a8e027edf593979c60b380a74d4b34d 110 Pfam PF00237 Ribosomal protein L22p/L17e 5 107 1.2E-39 T 12-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 Vc3S01_2937 4a8e027edf593979c60b380a74d4b34d 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 29.662 T 12-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_2937 4a8e027edf593979c60b380a74d4b34d 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 2.0E-50 T 12-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_2937 4a8e027edf593979c60b380a74d4b34d 110 Gene3D G3DSA:3.90.470.10 1 110 2.1E-48 T 12-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 Vc3S01_2937 4a8e027edf593979c60b380a74d4b34d 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 12-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_2937 4a8e027edf593979c60b380a74d4b34d 110 SUPERFAMILY SSF54843 1 109 7.85E-45 T 12-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 Vc3S01_2545 bb26ac5bc94f448d76c3a148d8c34587 181 Pfam PF07348 Syd protein (SUKH-2) 7 178 1.7E-70 T 12-10-2018 IPR009948 Syd GO:0009898 Vc3S01_2545 bb26ac5bc94f448d76c3a148d8c34587 181 Gene3D G3DSA:3.40.1580.20 1 181 3.8E-69 T 12-10-2018 IPR038228 Syd superfamily Vc3S01_2545 bb26ac5bc94f448d76c3a148d8c34587 181 Hamap MF_01104 Protein Syd [syd]. 3 181 37.085 T 12-10-2018 IPR009948 Syd GO:0009898 Vc3S01_2526 f1203e3018874fc9adf8bdc7440a0005 267 Pfam PF03330 Lytic transglycolase 84 173 1.3E-28 T 12-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain Vc3S01_2526 f1203e3018874fc9adf8bdc7440a0005 267 Pfam PF05036 Sporulation related domain 190 260 1.6E-10 T 12-10-2018 IPR007730 Sporulation-like domain GO:0042834 Vc3S01_2526 f1203e3018874fc9adf8bdc7440a0005 267 Gene3D G3DSA:2.40.40.10 83 177 3.3E-39 T 12-10-2018 IPR036908 RlpA-like domain superfamily Vc3S01_2526 f1203e3018874fc9adf8bdc7440a0005 267 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 86 251 6.7E-48 T 12-10-2018 IPR012997 Rare lipoprotein A Vc3S01_2526 f1203e3018874fc9adf8bdc7440a0005 267 SUPERFAMILY SSF110997 190 261 3.27E-12 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Vc3S01_2526 f1203e3018874fc9adf8bdc7440a0005 267 SUPERFAMILY SSF50685 88 175 2.16E-11 T 12-10-2018 IPR036908 RlpA-like domain superfamily Vc3S01_2526 f1203e3018874fc9adf8bdc7440a0005 267 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 12 176 25.479 T 12-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 Vc3S01_0354 e696f935693976aa9a81bebd52c6eeed 372 Gene3D G3DSA:3.40.50.300 92 271 1.5E-41 T 12-10-2018 Vc3S01_0354 e696f935693976aa9a81bebd52c6eeed 372 SUPERFAMILY SSF52540 101 314 5.89E-41 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0354 e696f935693976aa9a81bebd52c6eeed 372 ProSitePatterns PS00674 AAA-protein family signature. 225 244 - T 12-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 Vc3S01_0354 e696f935693976aa9a81bebd52c6eeed 372 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 127 252 1.5E-29 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Vc3S01_0354 e696f935693976aa9a81bebd52c6eeed 372 SMART SM00382 123 255 1.0E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_0313 4a50ad0d985195a7096652766d9e6b88 242 TIGRFAM TIGR02190 GlrX-dom: glutaredoxin-family domain 164 242 4.4E-42 T 12-10-2018 IPR011906 Glutaredoxin domain KEGG: 00480+1.11.1.15 Vc3S01_0313 4a50ad0d985195a7096652766d9e6b88 242 Gene3D G3DSA:3.40.30.10 171 242 6.5E-23 T 12-10-2018 Vc3S01_0313 4a50ad0d985195a7096652766d9e6b88 242 ProSitePatterns PS00195 Glutaredoxin active site. 175 191 - T 12-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 Vc3S01_0313 4a50ad0d985195a7096652766d9e6b88 242 Pfam PF00462 Glutaredoxin 173 231 3.7E-18 T 12-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 Vc3S01_0313 4a50ad0d985195a7096652766d9e6b88 242 Gene3D G3DSA:3.40.30.10 4 165 1.4E-61 T 12-10-2018 Vc3S01_0313 4a50ad0d985195a7096652766d9e6b88 242 Pfam PF08534 Redoxin 5 159 5.5E-32 T 12-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 Vc3S01_0313 4a50ad0d985195a7096652766d9e6b88 242 PRINTS PR00160 Glutaredoxin signature 173 191 3.6E-14 T 12-10-2018 IPR014025 Glutaredoxin subgroup Vc3S01_0313 4a50ad0d985195a7096652766d9e6b88 242 PRINTS PR00160 Glutaredoxin signature 228 241 3.6E-14 T 12-10-2018 IPR014025 Glutaredoxin subgroup Vc3S01_0313 4a50ad0d985195a7096652766d9e6b88 242 PRINTS PR00160 Glutaredoxin signature 214 227 3.6E-14 T 12-10-2018 IPR014025 Glutaredoxin subgroup Vc3S01_0313 4a50ad0d985195a7096652766d9e6b88 242 SUPERFAMILY SSF52833 2 241 3.01E-46 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Vc3S01_A1095 dcee196f2b370cb630376c09255ad3f6 251 SUPERFAMILY SSF88713 7 249 4.67E-92 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Vc3S01_A1095 dcee196f2b370cb630376c09255ad3f6 251 Gene3D G3DSA:3.20.20.370 6 251 6.2E-98 T 12-10-2018 Vc3S01_A1095 dcee196f2b370cb630376c09255ad3f6 251 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 6 251 43.615 T 12-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 Vc3S01_A1095 dcee196f2b370cb630376c09255ad3f6 251 Pfam PF03746 LamB/YcsF family 9 246 6.0E-95 T 12-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 Vc3S01_2519 c95615bc446dc35d4ae8ad06e1a2f0b3 857 Gene3D G3DSA:3.40.50.620 33 564 0.0 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Vc3S01_2519 c95615bc446dc35d4ae8ad06e1a2f0b3 857 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 403 3.7E-79 T 12-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 Vc3S01_2519 c95615bc446dc35d4ae8ad06e1a2f0b3 857 Pfam PF08264 Anticodon-binding domain of tRNA 699 820 8.4E-17 T 12-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 Vc3S01_2519 c95615bc446dc35d4ae8ad06e1a2f0b3 857 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 856 0.0 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Vc3S01_2519 c95615bc446dc35d4ae8ad06e1a2f0b3 857 Gene3D G3DSA:1.10.730.10 8 788 0.0 T 12-10-2018 Vc3S01_2519 c95615bc446dc35d4ae8ad06e1a2f0b3 857 SUPERFAMILY SSF50677 226 414 8.9E-57 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Vc3S01_2519 c95615bc446dc35d4ae8ad06e1a2f0b3 857 Gene3D G3DSA:3.90.740.10 227 413 0.0 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Vc3S01_2519 c95615bc446dc35d4ae8ad06e1a2f0b3 857 Gene3D G3DSA:3.10.330.110 565 626 0.0 T 12-10-2018 Vc3S01_2519 c95615bc446dc35d4ae8ad06e1a2f0b3 857 SUPERFAMILY SSF52374 4 666 1.45E-146 T 12-10-2018 Vc3S01_2519 c95615bc446dc35d4ae8ad06e1a2f0b3 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 7.2E-52 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Vc3S01_2519 c95615bc446dc35d4ae8ad06e1a2f0b3 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 7.2E-52 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Vc3S01_2519 c95615bc446dc35d4ae8ad06e1a2f0b3 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 484 502 7.2E-52 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Vc3S01_2519 c95615bc446dc35d4ae8ad06e1a2f0b3 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 522 544 7.2E-52 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Vc3S01_2519 c95615bc446dc35d4ae8ad06e1a2f0b3 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 555 565 7.2E-52 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Vc3S01_2519 c95615bc446dc35d4ae8ad06e1a2f0b3 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 7.2E-52 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Vc3S01_2519 c95615bc446dc35d4ae8ad06e1a2f0b3 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 7.2E-52 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Vc3S01_2519 c95615bc446dc35d4ae8ad06e1a2f0b3 857 SUPERFAMILY SSF47323 660 856 1.61E-35 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Vc3S01_2519 c95615bc446dc35d4ae8ad06e1a2f0b3 857 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Vc3S01_2519 c95615bc446dc35d4ae8ad06e1a2f0b3 857 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 172 4.0E-26 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Vc3S01_2519 c95615bc446dc35d4ae8ad06e1a2f0b3 857 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 617 649 2.0E-7 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Vc3S01_2519 c95615bc446dc35d4ae8ad06e1a2f0b3 857 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 417 570 1.7E-9 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Vc3S01_2519 c95615bc446dc35d4ae8ad06e1a2f0b3 857 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 856 23.439 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Vc3S01_2519 c95615bc446dc35d4ae8ad06e1a2f0b3 857 Gene3D G3DSA:3.10.20.590 796 856 1.2E-24 T 12-10-2018 Vc3S01_A1477 f078b019f9f2a73b400e3c16f62e4308 326 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 297 317 4.5E-9 T 12-10-2018 Vc3S01_A1477 f078b019f9f2a73b400e3c16f62e4308 326 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 259 276 4.5E-9 T 12-10-2018 Vc3S01_A1477 f078b019f9f2a73b400e3c16f62e4308 326 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 277 296 4.5E-9 T 12-10-2018 Vc3S01_A1477 f078b019f9f2a73b400e3c16f62e4308 326 SUPERFAMILY SSF56925 22 179 5.49E-33 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel Vc3S01_A1477 f078b019f9f2a73b400e3c16f62e4308 326 PRINTS PR01021 OMPA domain signature 214 236 5.5E-16 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Vc3S01_A1477 f078b019f9f2a73b400e3c16f62e4308 326 PRINTS PR01021 OMPA domain signature 244 259 5.5E-16 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Vc3S01_A1477 f078b019f9f2a73b400e3c16f62e4308 326 PRINTS PR01021 OMPA domain signature 259 275 5.5E-16 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Vc3S01_A1477 f078b019f9f2a73b400e3c16f62e4308 326 Gene3D G3DSA:3.30.1330.60 194 314 4.1E-41 T 12-10-2018 IPR036737 OmpA-like domain superfamily Vc3S01_A1477 f078b019f9f2a73b400e3c16f62e4308 326 Pfam PF00691 OmpA family 213 308 2.3E-25 T 12-10-2018 IPR006665 OmpA-like domain Vc3S01_A1477 f078b019f9f2a73b400e3c16f62e4308 326 Pfam PF13505 Outer membrane protein beta-barrel domain 6 179 1.1E-22 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel Vc3S01_A1477 f078b019f9f2a73b400e3c16f62e4308 326 Gene3D G3DSA:2.40.160.20 9 193 7.2E-42 T 12-10-2018 Vc3S01_A1477 f078b019f9f2a73b400e3c16f62e4308 326 SUPERFAMILY SSF103088 200 314 3.92E-39 T 12-10-2018 IPR036737 OmpA-like domain superfamily Vc3S01_A1741 48fd0245afafc63e338ea96fdf6d018d 115 Pfam PF06942 GlpM protein 6 112 4.3E-48 T 12-10-2018 IPR009707 Membrane protein GlpM/YdgC Vc3S01_A1741 48fd0245afafc63e338ea96fdf6d018d 115 ProDom PD028709 MEMBRANE INNER YDGC GLPM ALGINATE BIOSYNTHESIS TRANSMEMBRANE REQUIRED FOR UNCHARACTERIZED 15 110 3.0E-37 T 12-10-2018 IPR009707 Membrane protein GlpM/YdgC Vc3S01_2939 96a83967fdbc6271f6aded964cca3a7b 274 Gene3D G3DSA:2.30.30.30 115 195 7.5E-33 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 Vc3S01_2939 96a83967fdbc6271f6aded964cca3a7b 274 SMART SM01382 124 252 5.1E-92 T 12-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 Vc3S01_2939 96a83967fdbc6271f6aded964cca3a7b 274 SUPERFAMILY SSF50104 127 272 1.68E-61 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily Vc3S01_2939 96a83967fdbc6271f6aded964cca3a7b 274 PIRSF PIRSF002158 13 274 9.3E-101 T 12-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_2939 96a83967fdbc6271f6aded964cca3a7b 274 SMART SM01383 42 118 6.8E-45 T 12-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_2939 96a83967fdbc6271f6aded964cca3a7b 274 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 250 2.2E-56 T 12-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 Vc3S01_2939 96a83967fdbc6271f6aded964cca3a7b 274 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 273 1.4E-130 T 12-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Vc3S01_2939 96a83967fdbc6271f6aded964cca3a7b 274 SUPERFAMILY SSF50249 2 125 2.84E-49 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Vc3S01_2939 96a83967fdbc6271f6aded964cca3a7b 274 Gene3D G3DSA:4.10.950.10 196 274 1.1E-36 T 12-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_2939 96a83967fdbc6271f6aded964cca3a7b 274 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 12-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_2939 96a83967fdbc6271f6aded964cca3a7b 274 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 2.4E-32 T 12-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_2939 96a83967fdbc6271f6aded964cca3a7b 274 Gene3D G3DSA:2.40.50.140 1 114 5.4E-50 T 12-10-2018 Vc3S01_2939 96a83967fdbc6271f6aded964cca3a7b 274 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 47.422 T 12-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Vc3S01_A0358 d34d85a0c68d361548bce276fc9cca8c 289 PRINTS PR00207 Flagellin signature 76 95 2.5E-20 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Vc3S01_A0358 d34d85a0c68d361548bce276fc9cca8c 289 PRINTS PR00207 Flagellin signature 111 134 2.5E-20 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Vc3S01_A0358 d34d85a0c68d361548bce276fc9cca8c 289 PRINTS PR00207 Flagellin signature 37 54 2.5E-20 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Vc3S01_A0358 d34d85a0c68d361548bce276fc9cca8c 289 Gene3D G3DSA:1.20.58.1830 254 288 5.5E-30 T 12-10-2018 Vc3S01_A0358 d34d85a0c68d361548bce276fc9cca8c 289 Gene3D G3DSA:1.20.58.1830 7 33 5.2E-61 T 12-10-2018 Vc3S01_A0358 d34d85a0c68d361548bce276fc9cca8c 289 Gene3D G3DSA:2.170.280.10 183 196 5.2E-61 T 12-10-2018 Vc3S01_A0358 d34d85a0c68d361548bce276fc9cca8c 289 Pfam PF00700 Bacterial flagellin C-terminal helical region 210 288 4.5E-27 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Vc3S01_A0358 d34d85a0c68d361548bce276fc9cca8c 289 Pfam PF00669 Bacterial flagellin N-terminal helical region 6 141 2.7E-42 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Vc3S01_A0358 d34d85a0c68d361548bce276fc9cca8c 289 Gene3D G3DSA:1.20.1330.10 211 248 5.5E-30 T 12-10-2018 Vc3S01_A0358 d34d85a0c68d361548bce276fc9cca8c 289 Gene3D G3DSA:1.20.1330.10 45 182 5.2E-61 T 12-10-2018 Vc3S01_A0358 d34d85a0c68d361548bce276fc9cca8c 289 SUPERFAMILY SSF64518 1 289 7.59E-76 T 12-10-2018 Vc3S01_2082 021ee7d73df6c2cd73ec67a43c856734 449 SUPERFAMILY SSF48019 253 435 3.74E-73 T 12-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 Vc3S01_2082 021ee7d73df6c2cd73ec67a43c856734 449 SMART SM00382 50 166 1.6E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_2082 021ee7d73df6c2cd73ec67a43c856734 449 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 54 159 7.9E-17 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Vc3S01_2082 021ee7d73df6c2cd73ec67a43c856734 449 Pfam PF12002 MgsA AAA+ ATPase C terminal 269 435 2.7E-67 T 12-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal Vc3S01_2082 021ee7d73df6c2cd73ec67a43c856734 449 Gene3D G3DSA:1.20.272.10 242 346 1.3E-43 T 12-10-2018 Vc3S01_2082 021ee7d73df6c2cd73ec67a43c856734 449 Gene3D G3DSA:1.10.8.60 166 241 4.2E-23 T 12-10-2018 Vc3S01_2082 021ee7d73df6c2cd73ec67a43c856734 449 Pfam PF16193 AAA C-terminal domain 190 268 1.4E-21 T 12-10-2018 IPR032423 AAA C-terminal domain Vc3S01_2082 021ee7d73df6c2cd73ec67a43c856734 449 Gene3D G3DSA:1.10.3710.10 347 448 1.1E-36 T 12-10-2018 Vc3S01_2082 021ee7d73df6c2cd73ec67a43c856734 449 SUPERFAMILY SSF52540 11 235 7.22E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2082 021ee7d73df6c2cd73ec67a43c856734 449 Gene3D G3DSA:3.40.50.300 3 165 1.4E-48 T 12-10-2018 Vc3S01_2595 d080e338c54e771eec23651d1a1548ed 198 Gene3D G3DSA:2.30.22.10 142 198 2.0E-25 T 12-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 Vc3S01_2595 d080e338c54e771eec23651d1a1548ed 198 SUPERFAMILY SSF51064 143 198 2.22E-19 T 12-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 Vc3S01_2595 d080e338c54e771eec23651d1a1548ed 198 Hamap MF_01151 Protein GrpE [grpE]. 2 198 22.597 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Vc3S01_2595 d080e338c54e771eec23651d1a1548ed 198 Pfam PF01025 GrpE 40 198 3.0E-55 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Vc3S01_2595 d080e338c54e771eec23651d1a1548ed 198 PRINTS PR00773 GrpE protein signature 95 110 4.4E-29 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Vc3S01_2595 d080e338c54e771eec23651d1a1548ed 198 PRINTS PR00773 GrpE protein signature 67 83 4.4E-29 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Vc3S01_2595 d080e338c54e771eec23651d1a1548ed 198 PRINTS PR00773 GrpE protein signature 177 196 4.4E-29 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Vc3S01_2595 d080e338c54e771eec23651d1a1548ed 198 PRINTS PR00773 GrpE protein signature 150 165 4.4E-29 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Vc3S01_2595 d080e338c54e771eec23651d1a1548ed 198 SUPERFAMILY SSF58014 44 142 2.22E-29 T 12-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 Vc3S01_2595 d080e338c54e771eec23651d1a1548ed 198 Gene3D G3DSA:3.90.20.20 35 141 2.1E-32 T 12-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 Vc3S01_2595 d080e338c54e771eec23651d1a1548ed 198 ProSitePatterns PS01071 grpE protein signature. 153 196 - T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Vc3S01_2419 2be7b699ab1fd90acb66cf495d4fcf13 166 SUPERFAMILY SSF50104 115 163 7.62E-6 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily Vc3S01_2419 2be7b699ab1fd90acb66cf495d4fcf13 166 Pfam PF02357 Transcription termination factor nusG 2 94 3.0E-20 T 12-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Vc3S01_2419 2be7b699ab1fd90acb66cf495d4fcf13 166 Hamap MF_00951 Transcription antitermination protein RfaH [rfaH]. 1 166 47.342 T 12-10-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 Vc3S01_2419 2be7b699ab1fd90acb66cf495d4fcf13 166 Gene3D G3DSA:3.30.70.940 1 165 2.3E-53 T 12-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Vc3S01_2419 2be7b699ab1fd90acb66cf495d4fcf13 166 TIGRFAM TIGR01955 RfaH: transcription elongation factor/antiterminator RfaH 4 163 8.0E-63 T 12-10-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 Vc3S01_2419 2be7b699ab1fd90acb66cf495d4fcf13 166 SMART SM00738 1 101 7.5E-29 T 12-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Vc3S01_2419 2be7b699ab1fd90acb66cf495d4fcf13 166 SUPERFAMILY SSF82679 1 100 2.49E-29 T 12-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Vc3S01_A1854 862f2eac95e86341901ddc210e23eaf9 374 SUPERFAMILY SSF53187 2 372 2.88E-40 T 12-10-2018 Vc3S01_A1854 862f2eac95e86341901ddc210e23eaf9 374 Pfam PF07687 Peptidase dimerisation domain 175 274 1.0E-21 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain Vc3S01_A1854 862f2eac95e86341901ddc210e23eaf9 374 Gene3D G3DSA:3.40.630.10 11 361 4.3E-102 T 12-10-2018 Vc3S01_A1854 862f2eac95e86341901ddc210e23eaf9 374 PIRSF PIRSF037238 1 373 1.1E-147 T 12-10-2018 IPR017150 Peptidase M20, glutamate carboxypeptidase Vc3S01_A1854 862f2eac95e86341901ddc210e23eaf9 374 SUPERFAMILY SSF55031 177 281 1.44E-23 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Vc3S01_A1854 862f2eac95e86341901ddc210e23eaf9 374 Pfam PF01546 Peptidase family M20/M25/M40 73 370 5.1E-23 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 Vc3S01_A1854 862f2eac95e86341901ddc210e23eaf9 374 Gene3D G3DSA:3.30.70.360 177 286 4.3E-102 T 12-10-2018 Vc3S01_1056 6992144377e6846b0d2d639c7e6af5f0 543 PIRSF PIRSF002741 1 543 2.7E-116 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Vc3S01_1056 6992144377e6846b0d2d639c7e6af5f0 543 Gene3D G3DSA:3.10.105.10 297 512 7.8E-193 T 12-10-2018 Vc3S01_1056 6992144377e6846b0d2d639c7e6af5f0 543 SUPERFAMILY SSF53850 36 530 1.99E-148 T 12-10-2018 Vc3S01_1056 6992144377e6846b0d2d639c7e6af5f0 543 Gene3D G3DSA:3.40.190.10 43 524 7.8E-193 T 12-10-2018 Vc3S01_1056 6992144377e6846b0d2d639c7e6af5f0 543 Gene3D G3DSA:3.90.76.10 72 195 7.8E-193 T 12-10-2018 Vc3S01_1056 6992144377e6846b0d2d639c7e6af5f0 543 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 88 109 - T 12-10-2018 IPR023765 Solute-binding protein family 5, conserved site Vc3S01_1056 6992144377e6846b0d2d639c7e6af5f0 543 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 84 462 6.7E-93 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain Vc3S01_A0294 332947f356298260d15d4892fa5252ac 234 Gene3D G3DSA:3.40.1410.10 70 229 2.3E-35 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Vc3S01_A0294 332947f356298260d15d4892fa5252ac 234 SUPERFAMILY SSF46785 3 73 9.54E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A0294 332947f356298260d15d4892fa5252ac 234 Pfam PF07702 UTRA domain 86 224 2.5E-35 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 Vc3S01_A0294 332947f356298260d15d4892fa5252ac 234 SMART SM00866 86 225 4.0E-31 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 Vc3S01_A0294 332947f356298260d15d4892fa5252ac 234 TIGRFAM TIGR03337 phnR: phosphonate utilization transcriptional regulator PhnR 2 229 1.0E-116 T 12-10-2018 IPR017722 Phosphonate utilization transcriptional regulator PhnR Vc3S01_A0294 332947f356298260d15d4892fa5252ac 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 65 4.7E-18 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Vc3S01_A0294 332947f356298260d15d4892fa5252ac 234 SMART SM00345 6 65 4.1E-16 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Vc3S01_A0294 332947f356298260d15d4892fa5252ac 234 Gene3D G3DSA:1.10.10.10 2 69 5.6E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A0294 332947f356298260d15d4892fa5252ac 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 25 39 3.0E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Vc3S01_A0294 332947f356298260d15d4892fa5252ac 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 55 3.0E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Vc3S01_A0294 332947f356298260d15d4892fa5252ac 234 SUPERFAMILY SSF64288 53 228 9.74E-41 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Vc3S01_A1484 7e68e6495e03f3a7fac9b3b55208cd7d 196 Gene3D G3DSA:2.60.370.10 54 189 1.5E-43 T 12-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A1484 7e68e6495e03f3a7fac9b3b55208cd7d 196 PIRSF PIRSF005413 1 192 6.5E-68 T 12-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A1484 7e68e6495e03f3a7fac9b3b55208cd7d 196 SUPERFAMILY SSF110111 55 175 1.57E-46 T 12-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A1484 7e68e6495e03f3a7fac9b3b55208cd7d 196 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 28 172 3.0E-49 T 12-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_1175 0cc82f726fc7a66e82e4ade5dca57853 271 SUPERFAMILY SSF51197 2 270 5.95E-88 T 12-10-2018 Vc3S01_1175 0cc82f726fc7a66e82e4ade5dca57853 271 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 3 269 2.3E-63 T 12-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 Vc3S01_1175 0cc82f726fc7a66e82e4ade5dca57853 271 Gene3D G3DSA:3.60.130.10 1 271 9.7E-86 T 12-10-2018 Vc3S01_A0970 0aedd3de69946b1baad28cecea86fc4d 204 Gene3D G3DSA:3.40.50.880 2 204 1.8E-50 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Vc3S01_A0970 0aedd3de69946b1baad28cecea86fc4d 204 SUPERFAMILY SSF52317 1 178 4.25E-31 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Vc3S01_A0970 0aedd3de69946b1baad28cecea86fc4d 204 Pfam PF01965 DJ-1/PfpI family 4 157 1.2E-18 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 Vc3S01_2138 70a75cf32c251165964ae9dbeb09c9a2 705 Gene3D G3DSA:1.10.8.540 515 603 2.7E-32 T 12-10-2018 Vc3S01_2138 70a75cf32c251165964ae9dbeb09c9a2 705 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 137 160 - T 12-10-2018 IPR025505 FHIPEP conserved site Vc3S01_2138 70a75cf32c251165964ae9dbeb09c9a2 705 PIRSF PIRSF005419 1 705 4.4E-266 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Vc3S01_2138 70a75cf32c251165964ae9dbeb09c9a2 705 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 132 148 4.9E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Vc3S01_2138 70a75cf32c251165964ae9dbeb09c9a2 705 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 33 46 4.9E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Vc3S01_2138 70a75cf32c251165964ae9dbeb09c9a2 705 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 232 246 4.9E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Vc3S01_2138 70a75cf32c251165964ae9dbeb09c9a2 705 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 151 169 4.9E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Vc3S01_2138 70a75cf32c251165964ae9dbeb09c9a2 705 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 181 198 4.9E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Vc3S01_2138 70a75cf32c251165964ae9dbeb09c9a2 705 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 70 89 4.9E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Vc3S01_2138 70a75cf32c251165964ae9dbeb09c9a2 705 Gene3D G3DSA:1.10.490.80 605 703 6.7E-34 T 12-10-2018 Vc3S01_2138 70a75cf32c251165964ae9dbeb09c9a2 705 Pfam PF00771 FHIPEP family 26 695 3.3E-239 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Vc3S01_2138 70a75cf32c251165964ae9dbeb09c9a2 705 Gene3D G3DSA:3.40.30.60 369 514 3.7E-43 T 12-10-2018 Vc3S01_2138 70a75cf32c251165964ae9dbeb09c9a2 705 TIGRFAM TIGR01399 hrcV: type III secretion protein, HrcV family 14 703 3.0E-300 T 12-10-2018 IPR006302 Type III secretion protein HrcV GO:0015031|GO:0016021 Vc3S01_A1875 1b66aee34fa75880d0d45fa34eabcb4d 277 SUPERFAMILY SSF53697 112 269 9.51E-20 T 12-10-2018 Vc3S01_A1875 1b66aee34fa75880d0d45fa34eabcb4d 277 SUPERFAMILY SSF46689 14 88 4.03E-15 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_A1875 1b66aee34fa75880d0d45fa34eabcb4d 277 Pfam PF01418 Helix-turn-helix domain, rpiR family 15 83 7.8E-9 T 12-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 Vc3S01_A1875 1b66aee34fa75880d0d45fa34eabcb4d 277 Gene3D G3DSA:1.10.10.10 11 85 9.5E-12 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A1875 1b66aee34fa75880d0d45fa34eabcb4d 277 Pfam PF01380 SIS domain 147 269 2.9E-14 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Vc3S01_A1875 1b66aee34fa75880d0d45fa34eabcb4d 277 Gene3D G3DSA:3.40.50.10490 112 276 1.9E-23 T 12-10-2018 Vc3S01_A0513 16c8a209c1f004a620d31d7123bfad0a 623 Gene3D G3DSA:3.40.50.2300 519 622 4.5E-34 T 12-10-2018 Vc3S01_A0513 16c8a209c1f004a620d31d7123bfad0a 623 SUPERFAMILY SSF52794 525 618 3.49E-29 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 Vc3S01_A0513 16c8a209c1f004a620d31d7123bfad0a 623 SUPERFAMILY SSF55804 1 148 6.8E-40 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 Vc3S01_A0513 16c8a209c1f004a620d31d7123bfad0a 623 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 148 7.8E-37 T 12-10-2018 IPR002178 PTS EIIA type-2 domain Vc3S01_A0513 16c8a209c1f004a620d31d7123bfad0a 623 Pfam PF02378 Phosphotransferase system, EIIC 189 446 7.4E-12 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 Vc3S01_A0513 16c8a209c1f004a620d31d7123bfad0a 623 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 528 610 1.2E-27 T 12-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 Vc3S01_A0513 16c8a209c1f004a620d31d7123bfad0a 623 Gene3D G3DSA:3.40.930.10 2 148 2.3E-43 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 Vc3S01_A0513 16c8a209c1f004a620d31d7123bfad0a 623 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 177 497 4.5E-77 T 12-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 Vc3S01_A0513 16c8a209c1f004a620d31d7123bfad0a 623 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 7 133 6.3E-38 T 12-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 Vc3S01_A0513 16c8a209c1f004a620d31d7123bfad0a 623 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 528 618 3.0E-16 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 Vc3S01_1588 1d1ba43023686308257a0cb475b8560a 380 SUPERFAMILY SSF48256 14 380 6.67E-125 T 12-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 Vc3S01_1588 1d1ba43023686308257a0cb475b8560a 380 Gene3D G3DSA:1.10.230.10 229 327 2.3E-117 T 12-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain Vc3S01_1588 1d1ba43023686308257a0cb475b8560a 380 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 15 380 1.9E-160 T 12-10-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 Vc3S01_1588 1d1ba43023686308257a0cb475b8560a 380 Gene3D G3DSA:1.10.580.10 36 360 2.3E-117 T 12-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 Vc3S01_1588 1d1ba43023686308257a0cb475b8560a 380 ProSitePatterns PS00480 Citrate synthase signature. 263 275 - T 12-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 Vc3S01_1588 1d1ba43023686308257a0cb475b8560a 380 Pfam PF00285 Citrate synthase, C-terminal domain 15 362 2.9E-112 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 Vc3S01_1588 1d1ba43023686308257a0cb475b8560a 380 PRINTS PR00143 Citrate synthase signature 203 231 6.6E-36 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 Vc3S01_1588 1d1ba43023686308257a0cb475b8560a 380 PRINTS PR00143 Citrate synthase signature 130 143 6.6E-36 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 Vc3S01_1588 1d1ba43023686308257a0cb475b8560a 380 PRINTS PR00143 Citrate synthase signature 181 196 6.6E-36 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 Vc3S01_1588 1d1ba43023686308257a0cb475b8560a 380 PRINTS PR00143 Citrate synthase signature 313 329 6.6E-36 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 Vc3S01_1588 1d1ba43023686308257a0cb475b8560a 380 PRINTS PR00143 Citrate synthase signature 256 276 6.6E-36 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 Vc3S01_1588 1d1ba43023686308257a0cb475b8560a 380 PRINTS PR00143 Citrate synthase signature 333 347 6.6E-36 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 Vc3S01_1588 1d1ba43023686308257a0cb475b8560a 380 PIRSF PIRSF001369 7 380 6.8E-116 T 12-10-2018 IPR024176 Citrate synthase, bacterial-type Vc3S01_2372 0e1428b9cd222d0d8afbb793592be4c0 372 Gene3D G3DSA:3.30.420.10 1 194 6.3E-69 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Vc3S01_2372 0e1428b9cd222d0d8afbb793592be4c0 372 SUPERFAMILY SSF47819 194 301 5.01E-22 T 12-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 Vc3S01_2372 0e1428b9cd222d0d8afbb793592be4c0 372 Gene3D G3DSA:1.10.150.80 294 372 6.4E-28 T 12-10-2018 Vc3S01_2372 0e1428b9cd222d0d8afbb793592be4c0 372 SUPERFAMILY SSF47819 296 372 4.71E-21 T 12-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 Vc3S01_2372 0e1428b9cd222d0d8afbb793592be4c0 372 TIGRFAM TIGR01388 rnd: ribonuclease D 5 370 1.6E-146 T 12-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 Vc3S01_2372 0e1428b9cd222d0d8afbb793592be4c0 372 Gene3D G3DSA:1.10.150.80 196 293 5.1E-16 T 12-10-2018 Vc3S01_2372 0e1428b9cd222d0d8afbb793592be4c0 372 Pfam PF01612 3'-5' exonuclease 3 170 2.2E-41 T 12-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 Vc3S01_2372 0e1428b9cd222d0d8afbb793592be4c0 372 Pfam PF00570 HRDC domain 213 279 1.2E-7 T 12-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 Vc3S01_2372 0e1428b9cd222d0d8afbb793592be4c0 372 Hamap MF_01899 Ribonuclease D [rnd]. 3 372 43.747 T 12-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 Vc3S01_2372 0e1428b9cd222d0d8afbb793592be4c0 372 SUPERFAMILY SSF53098 2 210 7.01E-71 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Vc3S01_2372 0e1428b9cd222d0d8afbb793592be4c0 372 SMART SM00474 3 171 6.6E-46 T 12-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 Vc3S01_1082 a22562a0f87ea101991b44fe86938bd7 201 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 29 201 7.6E-69 T 12-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 Vc3S01_1082 a22562a0f87ea101991b44fe86938bd7 201 PIRSF PIRSF015617 6 201 1.3E-65 T 12-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 Vc3S01_1082 a22562a0f87ea101991b44fe86938bd7 201 Gene3D G3DSA:3.40.50.300 11 201 8.9E-70 T 12-10-2018 Vc3S01_1082 a22562a0f87ea101991b44fe86938bd7 201 SUPERFAMILY SSF52540 12 201 1.39E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_1082 a22562a0f87ea101991b44fe86938bd7 201 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 32 201 8.4E-58 T 12-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 Vc3S01_1082 a22562a0f87ea101991b44fe86938bd7 201 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 5 26 5.9E-7 T 12-10-2018 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17 Vc3S01_2543 ddfd1cda4a165430861bbf056940c30b 731 SUPERFAMILY SSF55816 424 642 9.42E-25 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Vc3S01_2543 ddfd1cda4a165430861bbf056940c30b 731 SUPERFAMILY SSF56300 58 390 1.98E-61 T 12-10-2018 Vc3S01_2543 ddfd1cda4a165430861bbf056940c30b 731 Pfam PF00149 Calcineurin-like phosphoesterase 66 285 1.3E-8 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Vc3S01_2543 ddfd1cda4a165430861bbf056940c30b 731 PRINTS PR01607 Apyrase family signature 243 260 9.9E-17 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Vc3S01_2543 ddfd1cda4a165430861bbf056940c30b 731 PRINTS PR01607 Apyrase family signature 583 602 9.9E-17 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Vc3S01_2543 ddfd1cda4a165430861bbf056940c30b 731 PRINTS PR01607 Apyrase family signature 62 80 9.9E-17 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Vc3S01_2543 ddfd1cda4a165430861bbf056940c30b 731 PRINTS PR01607 Apyrase family signature 332 352 9.9E-17 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Vc3S01_2543 ddfd1cda4a165430861bbf056940c30b 731 PRINTS PR01607 Apyrase family signature 483 506 9.9E-17 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Vc3S01_2543 ddfd1cda4a165430861bbf056940c30b 731 Gene3D G3DSA:3.60.21.10 56 398 5.9E-66 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like Vc3S01_2543 ddfd1cda4a165430861bbf056940c30b 731 Gene3D G3DSA:3.90.780.10 422 646 1.8E-37 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Vc3S01_2543 ddfd1cda4a165430861bbf056940c30b 731 Pfam PF02872 5'-nucleotidase, C-terminal domain 437 600 9.2E-18 T 12-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Vc3S01_2073 e31ab213bbc8303fefdb8501722384dc 227 Gene3D G3DSA:3.40.50.300 3 224 7.6E-69 T 12-10-2018 Vc3S01_2073 e31ab213bbc8303fefdb8501722384dc 227 SUPERFAMILY SSF52540 1 214 6.54E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2073 e31ab213bbc8303fefdb8501722384dc 227 PIRSF PIRSF006755 1 225 1.8E-77 T 12-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 Vc3S01_2073 e31ab213bbc8303fefdb8501722384dc 227 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 212 29.817 T 12-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 Vc3S01_2073 e31ab213bbc8303fefdb8501722384dc 227 Pfam PF13500 AAA domain 4 211 4.0E-38 T 12-10-2018 Vc3S01_2073 e31ab213bbc8303fefdb8501722384dc 227 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 176 6.8E-54 T 12-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 Vc3S01_A1388 b5bd120af2a8a82ff3f76299a184fdc4 205 Pfam PF00293 NUDIX domain 76 175 2.1E-11 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Vc3S01_A1388 b5bd120af2a8a82ff3f76299a184fdc4 205 ProSitePatterns PS00893 Nudix box signature. 96 117 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Vc3S01_A1388 b5bd120af2a8a82ff3f76299a184fdc4 205 SUPERFAMILY SSF55811 59 196 4.74E-27 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Vc3S01_A1388 b5bd120af2a8a82ff3f76299a184fdc4 205 Gene3D G3DSA:3.90.79.10 41 205 7.2E-38 T 12-10-2018 Vc3S01_A1388 b5bd120af2a8a82ff3f76299a184fdc4 205 Pfam PF12535 Hydrolase of X-linked nucleoside diphosphate N terminal 3 57 7.5E-22 T 12-10-2018 Vc3S01_A0144 52529b4b12ba9dd8d98b7befbbc1f57a 103 SUPERFAMILY SSF51182 2 102 3.74E-19 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily Vc3S01_A0144 52529b4b12ba9dd8d98b7befbbc1f57a 103 Pfam PF07883 Cupin domain 41 101 4.3E-11 T 12-10-2018 IPR013096 Cupin 2, conserved barrel Vc3S01_A0144 52529b4b12ba9dd8d98b7befbbc1f57a 103 Gene3D G3DSA:2.60.120.10 13 103 3.3E-39 T 12-10-2018 IPR014710 RmlC-like jelly roll fold Vc3S01_2975 e458b8c135fecd47aa44f3079d36d627 251 SUPERFAMILY SSF53448 4 217 1.41E-55 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Vc3S01_2975 e458b8c135fecd47aa44f3079d36d627 251 Pfam PF00535 Glycosyl transferase family 2 6 128 1.1E-37 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Vc3S01_2975 e458b8c135fecd47aa44f3079d36d627 251 Gene3D G3DSA:3.90.550.10 1 233 5.6E-60 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Vc3S01_A0349 1f8ef7106fdd50b2d1db7d781bf8d07c 330 Gene3D G3DSA:3.30.1330.60 124 305 7.8E-41 T 12-10-2018 IPR036737 OmpA-like domain superfamily Vc3S01_A0349 1f8ef7106fdd50b2d1db7d781bf8d07c 330 SUPERFAMILY SSF103088 154 274 3.01E-19 T 12-10-2018 IPR036737 OmpA-like domain superfamily Vc3S01_A0349 1f8ef7106fdd50b2d1db7d781bf8d07c 330 Pfam PF00691 OmpA family 170 267 1.5E-11 T 12-10-2018 IPR006665 OmpA-like domain Vc3S01_A0349 1f8ef7106fdd50b2d1db7d781bf8d07c 330 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 11 62 1.5E-16 T 12-10-2018 IPR025713 Motility protein B, N-terminal domain Vc3S01_2422 327d59d08bc20a54f77cf9065fa45a40 214 SUPERFAMILY SSF52540 1 193 7.56E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2422 327d59d08bc20a54f77cf9065fa45a40 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 12-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Vc3S01_2422 327d59d08bc20a54f77cf9065fa45a40 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 52.738 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Vc3S01_2422 327d59d08bc20a54f77cf9065fa45a40 214 Pfam PF00406 Adenylate kinase 5 185 2.8E-59 T 12-10-2018 Vc3S01_2422 327d59d08bc20a54f77cf9065fa45a40 214 Gene3D G3DSA:3.40.50.300 1 214 1.0E-77 T 12-10-2018 Vc3S01_2422 327d59d08bc20a54f77cf9065fa45a40 214 Pfam PF05191 Adenylate kinase, active site lid 123 158 9.0E-15 T 12-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 Vc3S01_2422 327d59d08bc20a54f77cf9065fa45a40 214 PRINTS PR00094 Adenylate kinase signature 4 17 2.0E-35 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Vc3S01_2422 327d59d08bc20a54f77cf9065fa45a40 214 PRINTS PR00094 Adenylate kinase signature 32 46 2.0E-35 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Vc3S01_2422 327d59d08bc20a54f77cf9065fa45a40 214 PRINTS PR00094 Adenylate kinase signature 156 171 2.0E-35 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Vc3S01_2422 327d59d08bc20a54f77cf9065fa45a40 214 PRINTS PR00094 Adenylate kinase signature 173 187 2.0E-35 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Vc3S01_2422 327d59d08bc20a54f77cf9065fa45a40 214 PRINTS PR00094 Adenylate kinase signature 81 97 2.0E-35 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Vc3S01_2422 327d59d08bc20a54f77cf9065fa45a40 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 213 8.8E-75 T 12-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 Vc3S01_1922 8fa79c78b02742459ee0c4a8de3a149b 448 SUPERFAMILY SSF55073 283 432 3.14E-40 T 12-10-2018 IPR029787 Nucleotide cyclase Vc3S01_1922 8fa79c78b02742459ee0c4a8de3a149b 448 Pfam PF08547 Complex I intermediate-associated protein 30 (CIA30) 36 114 7.8E-5 T 12-10-2018 IPR013857 NADH:ubiquinone oxidoreductase intermediate-associated protein 30 Reactome: R-HSA-6799198 Vc3S01_1922 8fa79c78b02742459ee0c4a8de3a149b 448 SUPERFAMILY SSF49785 36 215 2.13E-12 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily Vc3S01_1922 8fa79c78b02742459ee0c4a8de3a149b 448 Gene3D G3DSA:3.30.70.270 264 434 1.7E-47 T 12-10-2018 Vc3S01_1922 8fa79c78b02742459ee0c4a8de3a149b 448 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 276 434 9.2E-42 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_1922 8fa79c78b02742459ee0c4a8de3a149b 448 SMART SM00267 267 434 1.7E-48 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_1922 8fa79c78b02742459ee0c4a8de3a149b 448 Pfam PF00990 Diguanylate cyclase, GGDEF domain 278 430 6.3E-38 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_0188 3c1d28e700a67c5886f12852b1de5ea3 329 SUPERFAMILY SSF55073 152 308 5.65E-51 T 12-10-2018 IPR029787 Nucleotide cyclase Vc3S01_0188 3c1d28e700a67c5886f12852b1de5ea3 329 Gene3D G3DSA:3.30.70.270 145 311 1.8E-58 T 12-10-2018 Vc3S01_0188 3c1d28e700a67c5886f12852b1de5ea3 329 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 144 307 1.7E-51 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_0188 3c1d28e700a67c5886f12852b1de5ea3 329 Pfam PF00990 Diguanylate cyclase, GGDEF domain 148 304 3.5E-45 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_0188 3c1d28e700a67c5886f12852b1de5ea3 329 SMART SM00267 136 308 1.4E-56 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_0188 3c1d28e700a67c5886f12852b1de5ea3 329 SUPERFAMILY SSF55785 4 134 4.71E-5 T 12-10-2018 IPR035965 PAS domain superfamily Vc3S01_0188 3c1d28e700a67c5886f12852b1de5ea3 329 Gene3D G3DSA:3.30.450.20 3 144 4.8E-8 T 12-10-2018 Vc3S01_0779 a23062c477f555a0490613517fbe9c33 292 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 197 215 - T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Vc3S01_0779 a23062c477f555a0490613517fbe9c33 292 SUPERFAMILY SSF55920 3 282 2.22E-82 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like Vc3S01_0779 a23062c477f555a0490613517fbe9c33 292 Gene3D G3DSA:3.90.230.10 1 290 9.5E-104 T 12-10-2018 Vc3S01_0779 a23062c477f555a0490613517fbe9c33 292 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 279 6.4E-84 T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Vc3S01_0779 a23062c477f555a0490613517fbe9c33 292 Hamap MF_01974 Methionine aminopeptidase [map]. 3 280 40.601 T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Vc3S01_0779 a23062c477f555a0490613517fbe9c33 292 Pfam PF00557 Metallopeptidase family M24 12 271 3.1E-46 T 12-10-2018 IPR000994 Peptidase M24 Vc3S01_2958 8cab053501c70e01106c6cfad6ee03aa 256 ProSitePatterns PS00171 Triosephosphate isomerase active site. 167 177 - T 12-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_2958 8cab053501c70e01106c6cfad6ee03aa 256 Pfam PF00121 Triosephosphate isomerase 5 247 1.8E-87 T 12-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_2958 8cab053501c70e01106c6cfad6ee03aa 256 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 241 1.8E-77 T 12-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_2958 8cab053501c70e01106c6cfad6ee03aa 256 SUPERFAMILY SSF51351 2 250 1.06E-88 T 12-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_2958 8cab053501c70e01106c6cfad6ee03aa 256 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 250 59.194 T 12-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_2958 8cab053501c70e01106c6cfad6ee03aa 256 Gene3D G3DSA:3.20.20.70 1 256 1.1E-99 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_2666 6c3d468b7afdfe989127209b4c43d208 734 SUPERFAMILY SSF161098 502 720 1.31E-18 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_2666 6c3d468b7afdfe989127209b4c43d208 734 Gene3D G3DSA:1.10.3720.10 496 731 1.5E-22 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_2666 6c3d468b7afdfe989127209b4c43d208 734 SUPERFAMILY SSF161098 411 516 5.89E-7 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_2666 6c3d468b7afdfe989127209b4c43d208 734 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 452 728 1.8E-12 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Vc3S01_0587 2916878fbe3ebf40677217ff905150c3 771 Gene3D G3DSA:3.10.20.310 349 424 2.2E-6 T 12-10-2018 Vc3S01_0587 2916878fbe3ebf40677217ff905150c3 771 SUPERFAMILY SSF52151 38 322 3.4E-57 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Vc3S01_0587 2916878fbe3ebf40677217ff905150c3 771 Pfam PF07244 Surface antigen variable number repeat 354 423 5.6E-5 T 12-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 Vc3S01_0587 2916878fbe3ebf40677217ff905150c3 771 Gene3D G3DSA:3.40.1090.10 27 134 8.3E-29 T 12-10-2018 Vc3S01_0587 2916878fbe3ebf40677217ff905150c3 771 Gene3D G3DSA:3.40.1090.10 147 288 3.4E-18 T 12-10-2018 Vc3S01_0587 2916878fbe3ebf40677217ff905150c3 771 Pfam PF01734 Patatin-like phospholipase 44 234 5.8E-30 T 12-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 Vc3S01_0718 08bcf904a5eb1d8a46732b14f3efdb27 230 Pfam PF01592 NifU-like N terminal domain 55 102 5.8E-5 T 12-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 Vc3S01_0718 08bcf904a5eb1d8a46732b14f3efdb27 230 SUPERFAMILY SSF82649 56 101 4.97E-8 T 12-10-2018 Vc3S01_0718 08bcf904a5eb1d8a46732b14f3efdb27 230 Gene3D G3DSA:3.90.1010.10 31 116 7.0E-7 T 12-10-2018 Vc3S01_A1503 c48245d4911f15bf7943325c8e774580 407 Pfam PF04225 Opacity-associated protein A LysM-like domain 53 134 2.5E-8 T 12-10-2018 IPR007340 Opacity-associated protein A Vc3S01_A1503 c48245d4911f15bf7943325c8e774580 407 Gene3D G3DSA:2.70.70.10 245 375 3.2E-49 T 12-10-2018 IPR011055 Duplicated hybrid motif Vc3S01_A1503 c48245d4911f15bf7943325c8e774580 407 Gene3D G3DSA:3.10.450.350 140 244 3.9E-33 T 12-10-2018 Vc3S01_A1503 c48245d4911f15bf7943325c8e774580 407 Pfam PF01551 Peptidase family M23 275 368 7.2E-33 T 12-10-2018 IPR016047 Peptidase M23 Vc3S01_A1503 c48245d4911f15bf7943325c8e774580 407 SUPERFAMILY SSF51261 123 370 3.3E-68 T 12-10-2018 IPR011055 Duplicated hybrid motif Vc3S01_A1503 c48245d4911f15bf7943325c8e774580 407 Gene3D G3DSA:3.10.450.350 46 138 3.1E-34 T 12-10-2018 Vc3S01_0921 67b49dffee6364ab51821d46327d411b 368 SMART SM00448 20 132 1.1E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_0921 67b49dffee6364ab51821d46327d411b 368 Gene3D G3DSA:3.40.50.2300 8 148 1.5E-36 T 12-10-2018 Vc3S01_0921 67b49dffee6364ab51821d46327d411b 368 Pfam PF00072 Response regulator receiver domain 22 132 2.7E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_0921 67b49dffee6364ab51821d46327d411b 368 SUPERFAMILY SSF52172 20 137 1.32E-35 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_0921 67b49dffee6364ab51821d46327d411b 368 Gene3D G3DSA:3.60.40.10 164 364 3.0E-6 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Vc3S01_2744 245618038e149e2796b635b5be309c8b 318 SUPERFAMILY SSF55060 178 294 4.89E-33 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Vc3S01_2744 245618038e149e2796b635b5be309c8b 318 Pfam PF00288 GHMP kinases N terminal domain 90 156 1.9E-13 T 12-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 Vc3S01_2744 245618038e149e2796b635b5be309c8b 318 Pfam PF08544 GHMP kinases C terminal 218 291 1.9E-9 T 12-10-2018 IPR013750 GHMP kinase, C-terminal domain Vc3S01_2744 245618038e149e2796b635b5be309c8b 318 Gene3D G3DSA:3.30.70.890 174 283 1.3E-88 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Vc3S01_2744 245618038e149e2796b635b5be309c8b 318 Gene3D G3DSA:3.30.230.10 5 173 1.3E-88 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Vc3S01_2744 245618038e149e2796b635b5be309c8b 318 PRINTS PR00958 Homoserine kinase signature 143 156 9.5E-31 T 12-10-2018 Vc3S01_2744 245618038e149e2796b635b5be309c8b 318 PRINTS PR00958 Homoserine kinase signature 181 198 9.5E-31 T 12-10-2018 Vc3S01_2744 245618038e149e2796b635b5be309c8b 318 PRINTS PR00958 Homoserine kinase signature 10 25 9.5E-31 T 12-10-2018 Vc3S01_2744 245618038e149e2796b635b5be309c8b 318 PRINTS PR00958 Homoserine kinase signature 260 275 9.5E-31 T 12-10-2018 Vc3S01_2744 245618038e149e2796b635b5be309c8b 318 PRINTS PR00958 Homoserine kinase signature 103 118 9.5E-31 T 12-10-2018 Vc3S01_2744 245618038e149e2796b635b5be309c8b 318 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 96 107 - T 12-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 Vc3S01_2744 245618038e149e2796b635b5be309c8b 318 TIGRFAM TIGR00191 thrB: homoserine kinase 3 314 2.8E-109 T 12-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 Vc3S01_2744 245618038e149e2796b635b5be309c8b 318 Hamap MF_00384 Homoserine kinase [thrB]. 5 314 29.09 T 12-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 Vc3S01_2744 245618038e149e2796b635b5be309c8b 318 PIRSF PIRSF000676 1 316 2.4E-80 T 12-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 Vc3S01_2744 245618038e149e2796b635b5be309c8b 318 SUPERFAMILY SSF54211 3 191 5.09E-34 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Vc3S01_2667 d0c930c22717053aa4c51fd2c46d55b5 696 Pfam PF13090 Polyphosphate kinase C-terminal domain 331 676 4.9E-145 T 12-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 Vc3S01_2667 d0c930c22717053aa4c51fd2c46d55b5 696 PIRSF PIRSF015589 1 694 5.2E-253 T 12-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 Vc3S01_2667 d0c930c22717053aa4c51fd2c46d55b5 696 Pfam PF02503 Polyphosphate kinase middle domain 119 320 2.1E-46 T 12-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 Vc3S01_2667 d0c930c22717053aa4c51fd2c46d55b5 696 SUPERFAMILY SSF56024 315 497 1.26E-54 T 12-10-2018 Vc3S01_2667 d0c930c22717053aa4c51fd2c46d55b5 696 Gene3D G3DSA:3.30.870.10 500 686 5.5E-74 T 12-10-2018 Vc3S01_2667 d0c930c22717053aa4c51fd2c46d55b5 696 SUPERFAMILY SSF140356 4 104 5.49E-32 T 12-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 Vc3S01_2667 d0c930c22717053aa4c51fd2c46d55b5 696 SUPERFAMILY SSF143724 107 313 1.69E-63 T 12-10-2018 Vc3S01_2667 d0c930c22717053aa4c51fd2c46d55b5 696 Pfam PF13089 Polyphosphate kinase N-terminal domain 7 109 4.8E-31 T 12-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 Vc3S01_2667 d0c930c22717053aa4c51fd2c46d55b5 696 Gene3D G3DSA:1.20.58.310 9 109 3.5E-36 T 12-10-2018 Vc3S01_2667 d0c930c22717053aa4c51fd2c46d55b5 696 Gene3D G3DSA:3.30.1840.10 110 307 1.2E-74 T 12-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 Vc3S01_2667 d0c930c22717053aa4c51fd2c46d55b5 696 SUPERFAMILY SSF56024 500 684 5.61E-70 T 12-10-2018 Vc3S01_2667 d0c930c22717053aa4c51fd2c46d55b5 696 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 7 677 1.1E-263 T 12-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 Vc3S01_2667 d0c930c22717053aa4c51fd2c46d55b5 696 Gene3D G3DSA:3.30.870.10 319 499 4.3E-72 T 12-10-2018 Vc3S01_2667 d0c930c22717053aa4c51fd2c46d55b5 696 Hamap MF_00347 Polyphosphate kinase [ppk]. 4 681 27.412 T 12-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 Vc3S01_2459 e2da125cec21a0649766f86dda88077c 374 Pfam PF07196 Flagellin hook IN motif 200 245 1.2E-6 T 12-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 Vc3S01_2459 e2da125cec21a0649766f86dda88077c 374 SUPERFAMILY SSF64518 1 373 2.35E-77 T 12-10-2018 Vc3S01_2459 e2da125cec21a0649766f86dda88077c 374 Pfam PF00700 Bacterial flagellin C-terminal helical region 289 373 3.5E-21 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Vc3S01_2459 e2da125cec21a0649766f86dda88077c 374 Gene3D G3DSA:1.20.1330.10 44 165 4.1E-58 T 12-10-2018 Vc3S01_2459 e2da125cec21a0649766f86dda88077c 374 Gene3D G3DSA:1.20.1330.10 282 333 3.7E-34 T 12-10-2018 Vc3S01_2459 e2da125cec21a0649766f86dda88077c 374 PRINTS PR00207 Flagellin signature 110 133 9.8E-22 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Vc3S01_2459 e2da125cec21a0649766f86dda88077c 374 PRINTS PR00207 Flagellin signature 36 53 9.8E-22 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Vc3S01_2459 e2da125cec21a0649766f86dda88077c 374 PRINTS PR00207 Flagellin signature 75 94 9.8E-22 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Vc3S01_2459 e2da125cec21a0649766f86dda88077c 374 Gene3D G3DSA:2.170.280.10 184 281 3.7E-34 T 12-10-2018 Vc3S01_2459 e2da125cec21a0649766f86dda88077c 374 Gene3D G3DSA:1.20.58.1830 5 32 4.1E-58 T 12-10-2018 Vc3S01_2459 e2da125cec21a0649766f86dda88077c 374 Gene3D G3DSA:1.20.58.1830 339 373 3.7E-34 T 12-10-2018 Vc3S01_2459 e2da125cec21a0649766f86dda88077c 374 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 140 1.1E-33 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Vc3S01_0651 9778d024311231f3d266732091aee620 258 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 11 230 1.2E-80 T 12-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Vc3S01_0651 9778d024311231f3d266732091aee620 258 SMART SM01133 10 244 6.6E-79 T 12-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Vc3S01_0651 9778d024311231f3d266732091aee620 258 Pfam PF01791 DeoC/LacD family aldolase 11 239 6.8E-48 T 12-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Vc3S01_0651 9778d024311231f3d266732091aee620 258 Hamap MF_00592 Deoxyribose-phosphate aldolase [deoC]. 1 258 52.734 T 12-10-2018 IPR023649 Deoxyribose-phosphate aldolase type II GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 Vc3S01_0651 9778d024311231f3d266732091aee620 258 SUPERFAMILY SSF51569 6 245 7.54E-83 T 12-10-2018 Vc3S01_0651 9778d024311231f3d266732091aee620 258 PIRSF PIRSF001357 5 251 7.9E-77 T 12-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Vc3S01_0651 9778d024311231f3d266732091aee620 258 Gene3D G3DSA:3.20.20.70 1 256 1.2E-101 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_1847 a7769a3995ff83e69598246de1aab9da 457 Gene3D G3DSA:1.10.3860.10 4 457 2.0E-98 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 Vc3S01_1847 a7769a3995ff83e69598246de1aab9da 457 Pfam PF00375 Sodium:dicarboxylate symporter family 32 441 3.7E-100 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Vc3S01_1847 a7769a3995ff83e69598246de1aab9da 457 PRINTS PR00173 Glutamate-aspartate symporter signature 369 388 1.6E-32 T 12-10-2018 Vc3S01_1847 a7769a3995ff83e69598246de1aab9da 457 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 1.6E-32 T 12-10-2018 Vc3S01_1847 a7769a3995ff83e69598246de1aab9da 457 PRINTS PR00173 Glutamate-aspartate symporter signature 181 203 1.6E-32 T 12-10-2018 Vc3S01_1847 a7769a3995ff83e69598246de1aab9da 457 PRINTS PR00173 Glutamate-aspartate symporter signature 396 416 1.6E-32 T 12-10-2018 Vc3S01_1847 a7769a3995ff83e69598246de1aab9da 457 PRINTS PR00173 Glutamate-aspartate symporter signature 27 47 1.6E-32 T 12-10-2018 Vc3S01_1847 a7769a3995ff83e69598246de1aab9da 457 PRINTS PR00173 Glutamate-aspartate symporter signature 259 278 1.6E-32 T 12-10-2018 Vc3S01_1847 a7769a3995ff83e69598246de1aab9da 457 PRINTS PR00173 Glutamate-aspartate symporter signature 105 130 1.6E-32 T 12-10-2018 Vc3S01_1847 a7769a3995ff83e69598246de1aab9da 457 SUPERFAMILY SSF118215 29 441 3.66E-92 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 Vc3S01_0848 1d3ad8dc8c9a8983d3bfe9ea1a73dfc1 136 TIGRFAM TIGR00208 fliS: flagellar protein FliS 4 122 6.2E-24 T 12-10-2018 IPR003713 Flagellar protein FliS GO:0044780 Vc3S01_0848 1d3ad8dc8c9a8983d3bfe9ea1a73dfc1 136 PIRSF PIRSF039090 1 133 1.6E-42 T 12-10-2018 IPR003713 Flagellar protein FliS GO:0044780 Vc3S01_0848 1d3ad8dc8c9a8983d3bfe9ea1a73dfc1 136 Gene3D G3DSA:1.20.120.340 2 126 1.1E-39 T 12-10-2018 Vc3S01_0848 1d3ad8dc8c9a8983d3bfe9ea1a73dfc1 136 Pfam PF02561 Flagellar protein FliS 6 122 2.4E-37 T 12-10-2018 IPR003713 Flagellar protein FliS GO:0044780 Vc3S01_0848 1d3ad8dc8c9a8983d3bfe9ea1a73dfc1 136 SUPERFAMILY SSF101116 6 127 4.05E-39 T 12-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 Vc3S01_0158 8c1ba8b3c18658d94a334f71b82c4fab 233 Gene3D G3DSA:3.40.50.790 68 159 1.6E-80 T 12-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich Vc3S01_0158 8c1ba8b3c18658d94a334f71b82c4fab 233 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 2.5E-106 T 12-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 Vc3S01_0158 8c1ba8b3c18658d94a334f71b82c4fab 233 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.048 T 12-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 Vc3S01_0158 8c1ba8b3c18658d94a334f71b82c4fab 233 SUPERFAMILY SSF56808 6 225 2.49E-82 T 12-10-2018 IPR023674 Ribosomal protein L1-like Vc3S01_0158 8c1ba8b3c18658d94a334f71b82c4fab 233 PIRSF PIRSF002155 1 227 3.8E-79 T 12-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_0158 8c1ba8b3c18658d94a334f71b82c4fab 233 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 12-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_0158 8c1ba8b3c18658d94a334f71b82c4fab 233 Gene3D G3DSA:3.30.190.20 21 225 1.6E-80 T 12-10-2018 Vc3S01_0158 8c1ba8b3c18658d94a334f71b82c4fab 233 Pfam PF00687 Ribosomal protein L1p/L10e family 31 219 1.7E-52 T 12-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein Vc3S01_2852 6ca2382fc1c63c96a4e8dd7564635847 319 Gene3D G3DSA:3.40.190.10 108 307 5.8E-41 T 12-10-2018 Vc3S01_2852 6ca2382fc1c63c96a4e8dd7564635847 319 Gene3D G3DSA:1.10.10.10 14 104 2.9E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_2852 6ca2382fc1c63c96a4e8dd7564635847 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 25 84 1.3E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_2852 6ca2382fc1c63c96a4e8dd7564635847 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 61 1.4E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_2852 6ca2382fc1c63c96a4e8dd7564635847 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 61 72 1.4E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_2852 6ca2382fc1c63c96a4e8dd7564635847 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.4E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_2852 6ca2382fc1c63c96a4e8dd7564635847 319 SUPERFAMILY SSF46785 22 99 3.45E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_2852 6ca2382fc1c63c96a4e8dd7564635847 319 Gene3D G3DSA:3.40.190.10 187 283 5.8E-41 T 12-10-2018 Vc3S01_2852 6ca2382fc1c63c96a4e8dd7564635847 319 SUPERFAMILY SSF53850 106 308 1.09E-39 T 12-10-2018 Vc3S01_2852 6ca2382fc1c63c96a4e8dd7564635847 319 Pfam PF03466 LysR substrate binding domain 121 308 3.8E-24 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_A1676 ffdc6def872f78d22e354fd1adb25472 1018 SUPERFAMILY SSF82866 784 1004 6.02E-44 T 12-10-2018 Vc3S01_A1676 ffdc6def872f78d22e354fd1adb25472 1018 Pfam PF00873 AcrB/AcrD/AcrF family 5 1000 4.0E-151 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_A1676 ffdc6def872f78d22e354fd1adb25472 1018 Gene3D G3DSA:3.30.70.1430 551 649 7.7E-230 T 12-10-2018 Vc3S01_A1676 ffdc6def872f78d22e354fd1adb25472 1018 Gene3D G3DSA:3.30.70.1440 650 846 7.7E-230 T 12-10-2018 Vc3S01_A1676 ffdc6def872f78d22e354fd1adb25472 1018 Gene3D G3DSA:1.20.1640.10 11 505 7.7E-230 T 12-10-2018 Vc3S01_A1676 ffdc6def872f78d22e354fd1adb25472 1018 Gene3D G3DSA:1.20.1640.10 506 998 7.7E-230 T 12-10-2018 Vc3S01_A1676 ffdc6def872f78d22e354fd1adb25472 1018 SUPERFAMILY SSF82693 139 326 1.15E-13 T 12-10-2018 Vc3S01_A1676 ffdc6def872f78d22e354fd1adb25472 1018 Gene3D G3DSA:3.30.2090.10 180 274 7.7E-230 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Vc3S01_A1676 ffdc6def872f78d22e354fd1adb25472 1018 Gene3D G3DSA:3.30.70.1320 137 332 7.7E-230 T 12-10-2018 Vc3S01_A1676 ffdc6def872f78d22e354fd1adb25472 1018 SUPERFAMILY SSF82866 300 495 1.15E-32 T 12-10-2018 Vc3S01_A1676 ffdc6def872f78d22e354fd1adb25472 1018 SUPERFAMILY SSF82714 185 271 5.36E-14 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Vc3S01_A1676 ffdc6def872f78d22e354fd1adb25472 1018 Gene3D G3DSA:3.30.2090.10 701 788 7.7E-230 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Vc3S01_A1676 ffdc6def872f78d22e354fd1adb25472 1018 SUPERFAMILY SSF82693 41 134 1.09E-16 T 12-10-2018 Vc3S01_A1676 ffdc6def872f78d22e354fd1adb25472 1018 SUPERFAMILY SSF82714 707 781 1.22E-7 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Vc3S01_A1676 ffdc6def872f78d22e354fd1adb25472 1018 SUPERFAMILY SSF82693 550 600 3.82E-6 T 12-10-2018 Vc3S01_A1676 ffdc6def872f78d22e354fd1adb25472 1018 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 7.2E-20 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_A1676 ffdc6def872f78d22e354fd1adb25472 1018 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 7.2E-20 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_A1676 ffdc6def872f78d22e354fd1adb25472 1018 PRINTS PR00702 Acriflavin resistance protein family signature 468 491 7.2E-20 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_A1676 ffdc6def872f78d22e354fd1adb25472 1018 PRINTS PR00702 Acriflavin resistance protein family signature 390 414 7.2E-20 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_A1676 ffdc6def872f78d22e354fd1adb25472 1018 Gene3D G3DSA:3.30.70.1430 41 796 7.7E-230 T 12-10-2018 Vc3S01_2207 2fc4b9183f3e2000329dd5e0183a0340 546 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 81 104 - T 12-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 Vc3S01_2207 2fc4b9183f3e2000329dd5e0183a0340 546 Pfam PF05199 GMC oxidoreductase 387 523 1.4E-40 T 12-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 Vc3S01_2207 2fc4b9183f3e2000329dd5e0183a0340 546 Gene3D G3DSA:3.50.50.60 4 529 5.6E-185 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_2207 2fc4b9183f3e2000329dd5e0183a0340 546 Gene3D G3DSA:3.30.560.10 43 467 5.6E-185 T 12-10-2018 Vc3S01_2207 2fc4b9183f3e2000329dd5e0183a0340 546 SUPERFAMILY SSF51905 3 533 9.07E-90 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_2207 2fc4b9183f3e2000329dd5e0183a0340 546 Pfam PF00732 GMC oxidoreductase 4 294 1.2E-90 T 12-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 Vc3S01_2207 2fc4b9183f3e2000329dd5e0183a0340 546 PIRSF PIRSF000137 1 540 3.4E-154 T 12-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 Vc3S01_2207 2fc4b9183f3e2000329dd5e0183a0340 546 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 253 267 - T 12-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 Vc3S01_2207 2fc4b9183f3e2000329dd5e0183a0340 546 SUPERFAMILY SSF54373 289 472 1.28E-45 T 12-10-2018 Vc3S01_1682 06cb57d68fa7216f6b505c38a1d7ec03 212 Pfam PF11748 Protein of unknown function (DUF3306) 4 127 2.2E-25 T 12-10-2018 IPR021735 Protein of unknown function DUF3306 Vc3S01_1770 d6823a80d856de55bf751b05fd9e0383 569 Pfam PF05922 Peptidase inhibitor I9 27 117 5.4E-6 T 12-10-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 Vc3S01_1770 d6823a80d856de55bf751b05fd9e0383 569 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 162 173 - T 12-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site Vc3S01_1770 d6823a80d856de55bf751b05fd9e0383 569 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 351 361 - T 12-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site Vc3S01_1770 d6823a80d856de55bf751b05fd9e0383 569 Gene3D G3DSA:2.10.10.20 515 559 2.2E-11 T 12-10-2018 Vc3S01_1770 d6823a80d856de55bf751b05fd9e0383 569 SUPERFAMILY SSF51055 515 562 3.14E-6 T 12-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 Vc3S01_1770 d6823a80d856de55bf751b05fd9e0383 569 PRINTS PR00723 Subtilisin serine protease family (S8) signature 195 208 2.1E-19 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related Vc3S01_1770 d6823a80d856de55bf751b05fd9e0383 569 PRINTS PR00723 Subtilisin serine protease family (S8) signature 157 176 2.1E-19 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related Vc3S01_1770 d6823a80d856de55bf751b05fd9e0383 569 PRINTS PR00723 Subtilisin serine protease family (S8) signature 350 366 2.1E-19 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related Vc3S01_1770 d6823a80d856de55bf751b05fd9e0383 569 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 199 209 - T 12-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site Vc3S01_1770 d6823a80d856de55bf751b05fd9e0383 569 Pfam PF00082 Subtilase family 157 398 2.9E-37 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 Vc3S01_1770 d6823a80d856de55bf751b05fd9e0383 569 SUPERFAMILY SSF52743 133 439 6.02E-78 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Vc3S01_1770 d6823a80d856de55bf751b05fd9e0383 569 Gene3D G3DSA:2.60.40.10 420 513 1.3E-12 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_1770 d6823a80d856de55bf751b05fd9e0383 569 Gene3D G3DSA:3.40.50.200 127 410 9.2E-86 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Vc3S01_3039 83c009ed48a9d290678ecdee2b84ece7 463 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 17 444 2.8E-127 T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 Vc3S01_3039 83c009ed48a9d290678ecdee2b84ece7 463 Pfam PF00860 Permease family 22 414 4.4E-98 T 12-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 Vc3S01_3039 83c009ed48a9d290678ecdee2b84ece7 463 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 362 382 - T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 Vc3S01_3039 83c009ed48a9d290678ecdee2b84ece7 463 TIGRFAM TIGR03173 pbuX: xanthine permease 27 446 1.0E-131 T 12-10-2018 IPR017588 Uric acid permease UacT-like GO:0016021|GO:0022857|GO:0055085 Vc3S01_A0074 3f3628baa571e66faa69d73586ae1c8a 297 Pfam PF03466 LysR substrate binding domain 126 277 1.4E-10 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_A0074 3f3628baa571e66faa69d73586ae1c8a 297 Gene3D G3DSA:3.40.190.290 91 280 4.4E-5 T 12-10-2018 Vc3S01_A0074 3f3628baa571e66faa69d73586ae1c8a 297 SUPERFAMILY SSF53850 90 279 1.19E-16 T 12-10-2018 Vc3S01_A0074 3f3628baa571e66faa69d73586ae1c8a 297 SUPERFAMILY SSF46785 1 81 1.16E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A0074 3f3628baa571e66faa69d73586ae1c8a 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 4.3E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A0074 3f3628baa571e66faa69d73586ae1c8a 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.9E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A0074 3f3628baa571e66faa69d73586ae1c8a 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.9E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A0074 3f3628baa571e66faa69d73586ae1c8a 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.9E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A0074 3f3628baa571e66faa69d73586ae1c8a 297 Gene3D G3DSA:1.10.10.10 1 83 1.1E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A1987 64938bb2642cd14de32648f7a1f143f1 437 Pfam PF02056 Family 4 glycosyl hydrolase 6 187 9.8E-57 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Vc3S01_A1987 64938bb2642cd14de32648f7a1f143f1 437 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 197 412 3.6E-52 T 12-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 Vc3S01_A1987 64938bb2642cd14de32648f7a1f143f1 437 Gene3D G3DSA:3.90.110.10 171 437 1.3E-94 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 Vc3S01_A1987 64938bb2642cd14de32648f7a1f143f1 437 SUPERFAMILY SSF51735 3 170 1.05E-50 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_A1987 64938bb2642cd14de32648f7a1f143f1 437 SUPERFAMILY SSF56327 173 436 3.57E-85 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 Vc3S01_A1987 64938bb2642cd14de32648f7a1f143f1 437 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 142 172 - T 12-10-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 Vc3S01_A1987 64938bb2642cd14de32648f7a1f143f1 437 Gene3D G3DSA:3.40.50.720 1 170 4.3E-63 T 12-10-2018 Vc3S01_A1987 64938bb2642cd14de32648f7a1f143f1 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 78 94 9.5E-41 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Vc3S01_A1987 64938bb2642cd14de32648f7a1f143f1 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 99 112 9.5E-41 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Vc3S01_A1987 64938bb2642cd14de32648f7a1f143f1 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 6 21 9.5E-41 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Vc3S01_A1987 64938bb2642cd14de32648f7a1f143f1 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 142 159 9.5E-41 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Vc3S01_A1987 64938bb2642cd14de32648f7a1f143f1 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 193 205 9.5E-41 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Vc3S01_A1987 64938bb2642cd14de32648f7a1f143f1 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 113 133 9.5E-41 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Vc3S01_A1987 64938bb2642cd14de32648f7a1f143f1 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 167 178 9.5E-41 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Vc3S01_A1326 faf218e7953e00e752a779ba71c32b31 440 TIGRFAM TIGR03942 sulfatase_rSAM: anaerobic sulfatase maturase 18 409 5.7E-149 T 12-10-2018 Vc3S01_A1326 faf218e7953e00e752a779ba71c32b31 440 Gene3D G3DSA:3.20.20.70 15 411 8.9E-112 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_A1326 faf218e7953e00e752a779ba71c32b31 440 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 252 326 2.0E-6 T 12-10-2018 Vc3S01_A1326 faf218e7953e00e752a779ba71c32b31 440 SUPERFAMILY SSF102114 24 372 7.32E-38 T 12-10-2018 Vc3S01_A1326 faf218e7953e00e752a779ba71c32b31 440 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 302 391 1.3E-17 T 12-10-2018 IPR023885 4Fe4S-binding SPASM domain Vc3S01_A1326 faf218e7953e00e752a779ba71c32b31 440 Pfam PF04055 Radical SAM superfamily 24 196 3.9E-12 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Vc3S01_A1326 faf218e7953e00e752a779ba71c32b31 440 Pfam PF13186 Iron-sulfur cluster-binding domain 303 363 3.9E-8 T 12-10-2018 IPR023885 4Fe4S-binding SPASM domain Vc3S01_0627 82b4f7ad1da9ea1efa47c609b89eeefb 112 Pfam PF03840 Preprotein translocase SecG subunit 4 71 1.1E-21 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Vc3S01_0627 82b4f7ad1da9ea1efa47c609b89eeefb 112 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 73 4.6E-25 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Vc3S01_0627 82b4f7ad1da9ea1efa47c609b89eeefb 112 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 2.4E-44 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Vc3S01_0627 82b4f7ad1da9ea1efa47c609b89eeefb 112 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 2.4E-44 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Vc3S01_0627 82b4f7ad1da9ea1efa47c609b89eeefb 112 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 2.4E-44 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Vc3S01_0627 82b4f7ad1da9ea1efa47c609b89eeefb 112 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 2.4E-44 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Vc3S01_1486 beab7b7b18efd1c059ed9299d97dae76 458 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 441 1.9E-151 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Vc3S01_1486 beab7b7b18efd1c059ed9299d97dae76 458 PRINTS PR00175 Sodium/alanine symporter signature 212 231 5.3E-52 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Vc3S01_1486 beab7b7b18efd1c059ed9299d97dae76 458 PRINTS PR00175 Sodium/alanine symporter signature 184 202 5.3E-52 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Vc3S01_1486 beab7b7b18efd1c059ed9299d97dae76 458 PRINTS PR00175 Sodium/alanine symporter signature 92 114 5.3E-52 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Vc3S01_1486 beab7b7b18efd1c059ed9299d97dae76 458 PRINTS PR00175 Sodium/alanine symporter signature 307 325 5.3E-52 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Vc3S01_1486 beab7b7b18efd1c059ed9299d97dae76 458 PRINTS PR00175 Sodium/alanine symporter signature 353 375 5.3E-52 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Vc3S01_1486 beab7b7b18efd1c059ed9299d97dae76 458 PRINTS PR00175 Sodium/alanine symporter signature 412 432 5.3E-52 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Vc3S01_1486 beab7b7b18efd1c059ed9299d97dae76 458 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 92 107 - T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Vc3S01_1486 beab7b7b18efd1c059ed9299d97dae76 458 Pfam PF01235 Sodium:alanine symporter family 54 449 1.5E-138 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Vc3S01_0943 2f7847b468835e8f2db89f5b069e4a87 632 ProSitePatterns PS01303 BCCT family of transporters signature. 321 330 - T 12-10-2018 IPR018093 BCCT transporter, conserved site Vc3S01_0943 2f7847b468835e8f2db89f5b069e4a87 632 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 50 501 3.4E-147 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 Vc3S01_0943 2f7847b468835e8f2db89f5b069e4a87 632 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 13 502 5.0E-159 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 Vc3S01_A1288 943a7513d0f48531a5c5670d12a2bb23 199 SUPERFAMILY SSF56925 60 165 3.66E-6 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel Vc3S01_A1754 70e86859021939e68130e28a92a4a352 246 SUPERFAMILY SSF100950 70 226 1.99E-24 T 12-10-2018 IPR037171 NagB/RpiA transferase-like Vc3S01_A1754 70e86859021939e68130e28a92a4a352 246 SMART SM01134 67 227 4.2E-47 T 12-10-2018 Vc3S01_A1754 70e86859021939e68130e28a92a4a352 246 SMART SM00420 4 56 5.7E-20 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Vc3S01_A1754 70e86859021939e68130e28a92a4a352 246 Gene3D G3DSA:1.10.10.10 1 52 7.6E-7 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A1754 70e86859021939e68130e28a92a4a352 246 SUPERFAMILY SSF46785 2 59 2.62E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A1754 70e86859021939e68130e28a92a4a352 246 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 22 36 2.0E-6 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Vc3S01_A1754 70e86859021939e68130e28a92a4a352 246 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 36 54 2.0E-6 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Vc3S01_A1754 70e86859021939e68130e28a92a4a352 246 ProSitePatterns PS00894 DeoR-type HTH domain signature. 4 38 - T 12-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 Vc3S01_A1754 70e86859021939e68130e28a92a4a352 246 Pfam PF00455 DeoR C terminal sensor domain 72 226 2.5E-41 T 12-10-2018 IPR014036 DeoR C-terminal sensor domain Vc3S01_A1754 70e86859021939e68130e28a92a4a352 246 Pfam PF08220 DeoR-like helix-turn-helix domain 4 59 9.6E-17 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Vc3S01_2086 6718cf98edd91f1897c29245e4e51865 374 SUPERFAMILY SSF51735 137 303 5.02E-49 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_2086 6718cf98edd91f1897c29245e4e51865 374 Gene3D G3DSA:3.40.50.720 3 353 1.6E-136 T 12-10-2018 Vc3S01_2086 6718cf98edd91f1897c29245e4e51865 374 PIRSF PIRSF000183 1 371 3.1E-156 T 12-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 Vc3S01_2086 6718cf98edd91f1897c29245e4e51865 374 SUPERFAMILY SSF52283 1 360 3.15E-67 T 12-10-2018 Vc3S01_2086 6718cf98edd91f1897c29245e4e51865 374 SMART SM01003 4 137 4.8E-79 T 12-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal Vc3S01_2086 6718cf98edd91f1897c29245e4e51865 374 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 4.3E-46 T 12-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal Vc3S01_2086 6718cf98edd91f1897c29245e4e51865 374 Gene3D G3DSA:3.40.50.720 130 305 1.6E-136 T 12-10-2018 Vc3S01_2086 6718cf98edd91f1897c29245e4e51865 374 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 352 1.9E-83 T 12-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain Vc3S01_2086 6718cf98edd91f1897c29245e4e51865 374 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 370 1.2E-155 T 12-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 Vc3S01_2086 6718cf98edd91f1897c29245e4e51865 374 SMART SM01002 149 297 3.6E-87 T 12-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain Vc3S01_A0238 94da04697167671b502583b94a3864c6 288 SMART SM00342 196 279 3.4E-22 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_A0238 94da04697167671b502583b94a3864c6 288 Pfam PF12833 Helix-turn-helix domain 202 280 1.1E-17 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_A0238 94da04697167671b502583b94a3864c6 288 SUPERFAMILY SSF46689 232 283 1.08E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_A0238 94da04697167671b502583b94a3864c6 288 Gene3D G3DSA:1.10.10.60 229 285 4.6E-16 T 12-10-2018 Vc3S01_A0238 94da04697167671b502583b94a3864c6 288 SUPERFAMILY SSF46689 180 227 8.96E-6 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_A0238 94da04697167671b502583b94a3864c6 288 Gene3D G3DSA:1.10.10.60 177 228 8.9E-10 T 12-10-2018 Vc3S01_A0238 94da04697167671b502583b94a3864c6 288 SUPERFAMILY SSF51215 28 98 4.32E-5 T 12-10-2018 IPR037923 Transcription regulator HTH-like Vc3S01_A1793 580ca63968d6f5975641436c35375efd 253 Gene3D G3DSA:3.40.190.10 14 222 1.1E-28 T 12-10-2018 Vc3S01_A1793 580ca63968d6f5975641436c35375efd 253 SUPERFAMILY SSF53850 7 224 6.6E-17 T 12-10-2018 Vc3S01_A1793 580ca63968d6f5975641436c35375efd 253 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 14 243 3.3E-42 T 12-10-2018 Vc3S01_A1793 580ca63968d6f5975641436c35375efd 253 Gene3D G3DSA:3.40.190.10 93 192 1.1E-28 T 12-10-2018 Vc3S01_A2054 df15d89fd722135209d16b48a43169f3 217 SUPERFAMILY SSF51161 62 211 4.57E-38 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily Vc3S01_A2054 df15d89fd722135209d16b48a43169f3 217 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 118 153 1.7E-11 T 12-10-2018 IPR001451 Hexapeptide repeat Vc3S01_A2054 df15d89fd722135209d16b48a43169f3 217 Gene3D G3DSA:2.160.10.10 1 216 3.8E-63 T 12-10-2018 Vc3S01_A2054 df15d89fd722135209d16b48a43169f3 217 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 127 155 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 Vc3S01_1148 d4de9b6b4aa85966ba9d89ab348806ff 282 SUPERFAMILY SSF56281 17 277 9.83E-29 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Vc3S01_1148 d4de9b6b4aa85966ba9d89ab348806ff 282 Gene3D G3DSA:3.60.15.10 1 282 1.3E-79 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Vc3S01_A0417 bc7c27544d1c264960acd3fdb248b1a4 563 Pfam PF02652 L-lactate permease 7 550 2.0E-105 T 12-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 Vc3S01_1816 fafb8757960f379c42951a8dcf2af693 286 Gene3D G3DSA:1.10.260.40 1 89 1.1E-9 T 12-10-2018 Vc3S01_1816 fafb8757960f379c42951a8dcf2af693 286 SUPERFAMILY SSF47413 1 73 3.38E-8 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Vc3S01_A0262 b3f947c16bdbcdc1a646e307230175e7 452 Gene3D G3DSA:3.30.70.270 290 452 1.5E-49 T 12-10-2018 Vc3S01_A0262 b3f947c16bdbcdc1a646e307230175e7 452 SUPERFAMILY SSF55073 299 451 4.0E-43 T 12-10-2018 IPR029787 Nucleotide cyclase Vc3S01_A0262 b3f947c16bdbcdc1a646e307230175e7 452 Pfam PF03924 CHASE domain 109 215 3.4E-16 T 12-10-2018 IPR006189 CHASE domain Vc3S01_A0262 b3f947c16bdbcdc1a646e307230175e7 452 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 292 451 3.9E-47 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A0262 b3f947c16bdbcdc1a646e307230175e7 452 Pfam PF00990 Diguanylate cyclase, GGDEF domain 294 451 2.7E-44 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A0262 b3f947c16bdbcdc1a646e307230175e7 452 SMART SM01079 47 223 2.6E-31 T 12-10-2018 IPR006189 CHASE domain Vc3S01_A0262 b3f947c16bdbcdc1a646e307230175e7 452 SMART SM00267 283 450 4.9E-46 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_p30039 23aaa126f2af942067fe1c80c4ac0d73 185 SUPERFAMILY SSF46689 141 181 1.4E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_p30039 23aaa126f2af942067fe1c80c4ac0d73 185 SMART SM00857 3 139 1.0E-48 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Vc3S01_p30039 23aaa126f2af942067fe1c80c4ac0d73 185 Gene3D G3DSA:1.10.10.60 139 182 1.0E-19 T 12-10-2018 Vc3S01_p30039 23aaa126f2af942067fe1c80c4ac0d73 185 Gene3D G3DSA:3.40.50.1390 1 122 3.0E-45 T 12-10-2018 Vc3S01_p30039 23aaa126f2af942067fe1c80c4ac0d73 185 Pfam PF00239 Resolvase, N terminal domain 4 138 4.6E-38 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Vc3S01_p30039 23aaa126f2af942067fe1c80c4ac0d73 185 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 12-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 Vc3S01_p30039 23aaa126f2af942067fe1c80c4ac0d73 185 ProSitePatterns PS00398 Site-specific recombinases signature 2. 58 70 - T 12-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 Vc3S01_p30039 23aaa126f2af942067fe1c80c4ac0d73 185 SUPERFAMILY SSF53041 2 138 1.26E-40 T 12-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 Vc3S01_p30039 23aaa126f2af942067fe1c80c4ac0d73 185 Pfam PF02796 Helix-turn-helix domain of resolvase 141 181 2.8E-10 T 12-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 Vc3S01_A0536 c6fc6e4503bc52930201ebb620a17bd9 392 SUPERFAMILY SSF53850 24 391 2.12E-90 T 12-10-2018 Vc3S01_A0536 c6fc6e4503bc52930201ebb620a17bd9 392 PRINTS PR00181 Maltose binding protein signature 167 186 7.5E-80 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 Vc3S01_A0536 c6fc6e4503bc52930201ebb620a17bd9 392 PRINTS PR00181 Maltose binding protein signature 32 50 7.5E-80 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 Vc3S01_A0536 c6fc6e4503bc52930201ebb620a17bd9 392 PRINTS PR00181 Maltose binding protein signature 66 84 7.5E-80 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 Vc3S01_A0536 c6fc6e4503bc52930201ebb620a17bd9 392 PRINTS PR00181 Maltose binding protein signature 126 145 7.5E-80 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 Vc3S01_A0536 c6fc6e4503bc52930201ebb620a17bd9 392 PRINTS PR00181 Maltose binding protein signature 295 316 7.5E-80 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 Vc3S01_A0536 c6fc6e4503bc52930201ebb620a17bd9 392 PRINTS PR00181 Maltose binding protein signature 353 372 7.5E-80 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 Vc3S01_A0536 c6fc6e4503bc52930201ebb620a17bd9 392 PRINTS PR00181 Maltose binding protein signature 229 248 7.5E-80 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 Vc3S01_A0536 c6fc6e4503bc52930201ebb620a17bd9 392 PRINTS PR00181 Maltose binding protein signature 147 166 7.5E-80 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 Vc3S01_A0536 c6fc6e4503bc52930201ebb620a17bd9 392 Pfam PF13416 Bacterial extracellular solute-binding protein 46 321 4.0E-45 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein Vc3S01_A0536 c6fc6e4503bc52930201ebb620a17bd9 392 Gene3D G3DSA:3.40.190.10 134 384 2.9E-135 T 12-10-2018 Vc3S01_A0536 c6fc6e4503bc52930201ebb620a17bd9 392 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 129 146 - T 12-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 Vc3S01_A0536 c6fc6e4503bc52930201ebb620a17bd9 392 Gene3D G3DSA:3.40.190.10 44 353 2.9E-135 T 12-10-2018 Vc3S01_2638 e9ed2e53da731d35917524ed01cd0f1b 171 SMART SM00271 1 66 2.9E-9 T 12-10-2018 IPR001623 DnaJ domain Vc3S01_2638 e9ed2e53da731d35917524ed01cd0f1b 171 Pfam PF00226 DnaJ domain 2 70 4.0E-7 T 12-10-2018 IPR001623 DnaJ domain Vc3S01_2638 e9ed2e53da731d35917524ed01cd0f1b 171 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 1 170 25.341 T 12-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Vc3S01_2638 e9ed2e53da731d35917524ed01cd0f1b 171 Gene3D G3DSA:1.20.1280.20 80 171 3.0E-28 T 12-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Vc3S01_2638 e9ed2e53da731d35917524ed01cd0f1b 171 SUPERFAMILY SSF47144 78 170 2.62E-25 T 12-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Vc3S01_2638 e9ed2e53da731d35917524ed01cd0f1b 171 Gene3D G3DSA:1.10.287.110 1 79 1.2E-22 T 12-10-2018 IPR036869 Chaperone J-domain superfamily Vc3S01_2638 e9ed2e53da731d35917524ed01cd0f1b 171 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 13 169 1.3E-40 T 12-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Vc3S01_2638 e9ed2e53da731d35917524ed01cd0f1b 171 SUPERFAMILY SSF46565 1 72 6.54E-17 T 12-10-2018 IPR036869 Chaperone J-domain superfamily Vc3S01_2638 e9ed2e53da731d35917524ed01cd0f1b 171 Pfam PF07743 HSCB C-terminal oligomerisation domain 87 163 1.7E-19 T 12-10-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Vc3S01_A1145 0c268cbf3d2f190d84162d8685eaed08 332 Pfam PF12833 Helix-turn-helix domain 257 329 5.1E-17 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_A1145 0c268cbf3d2f190d84162d8685eaed08 332 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 297 312 8.5E-7 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Vc3S01_A1145 0c268cbf3d2f190d84162d8685eaed08 332 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 312 328 8.5E-7 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Vc3S01_A1145 0c268cbf3d2f190d84162d8685eaed08 332 Gene3D G3DSA:1.10.10.60 229 331 8.0E-21 T 12-10-2018 Vc3S01_A1145 0c268cbf3d2f190d84162d8685eaed08 332 SMART SM00342 246 328 8.1E-20 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_A1145 0c268cbf3d2f190d84162d8685eaed08 332 SUPERFAMILY SSF46689 286 330 1.97E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_0584 809ec05bcb58769ab903439bb97392e1 238 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 4 230 1.9E-78 T 12-10-2018 IPR005224 Sugar fermentation stimulation protein Vc3S01_0584 809ec05bcb58769ab903439bb97392e1 238 Pfam PF03749 Sugar fermentation stimulation protein 13 229 2.1E-75 T 12-10-2018 IPR005224 Sugar fermentation stimulation protein Vc3S01_0584 809ec05bcb58769ab903439bb97392e1 238 Gene3D G3DSA:3.40.1350.60 81 237 3.4E-54 T 12-10-2018 Vc3S01_0584 809ec05bcb58769ab903439bb97392e1 238 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 238 56.637 T 12-10-2018 IPR005224 Sugar fermentation stimulation protein Vc3S01_0584 809ec05bcb58769ab903439bb97392e1 238 Gene3D G3DSA:2.40.50.580 1 80 1.0E-28 T 12-10-2018 Vc3S01_A1200 4490c6bf6758c918f862a4d9d0e3bf09 373 Pfam PF07690 Major Facilitator Superfamily 19 343 3.2E-41 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Vc3S01_A1200 4490c6bf6758c918f862a4d9d0e3bf09 373 PRINTS PR01035 Tetracycline resistance protein signature 294 314 7.8E-7 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Vc3S01_A1200 4490c6bf6758c918f862a4d9d0e3bf09 373 PRINTS PR01035 Tetracycline resistance protein signature 4 20 7.8E-7 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Vc3S01_A1200 4490c6bf6758c918f862a4d9d0e3bf09 373 PRINTS PR01035 Tetracycline resistance protein signature 127 149 7.8E-7 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Vc3S01_A1200 4490c6bf6758c918f862a4d9d0e3bf09 373 SUPERFAMILY SSF103473 7 367 1.31E-50 T 12-10-2018 IPR036259 MFS transporter superfamily Vc3S01_A1200 4490c6bf6758c918f862a4d9d0e3bf09 373 Gene3D G3DSA:1.20.1720.10 7 371 1.5E-73 T 12-10-2018 Vc3S01_A0388 8c1aba916219ed9dd01c62a184b27b11 250 Gene3D G3DSA:3.20.20.140 3 247 7.2E-63 T 12-10-2018 Vc3S01_A0388 8c1aba916219ed9dd01c62a184b27b11 250 SUPERFAMILY SSF89550 4 244 9.68E-61 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Vc3S01_A0388 8c1aba916219ed9dd01c62a184b27b11 250 SMART SM00481 5 79 4.5E-5 T 12-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal Vc3S01_A0388 8c1aba916219ed9dd01c62a184b27b11 250 Hamap MF_01561 Probable phosphatase YcdX [ycdX]. 2 245 52.464 T 12-10-2018 IPR023710 Probable phosphatase YcdX GO:0008270 Vc3S01_1386 b84bacfee11408b3cdf87304e695bd88 80 Gene3D G3DSA:3.40.1620.10 1 49 1.5E-6 T 12-10-2018 Vc3S01_1386 b84bacfee11408b3cdf87304e695bd88 80 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 4 50 2.5E-13 T 12-10-2018 Vc3S01_1386 b84bacfee11408b3cdf87304e695bd88 80 SUPERFAMILY SSF143120 1 75 1.13E-14 T 12-10-2018 IPR036165 YefM-like superfamily Vc3S01_1386 b84bacfee11408b3cdf87304e695bd88 80 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 63 1.6E-10 T 12-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM Vc3S01_p30071 1c045c674eea43e8056727dcfedb0836 159 Pfam PF11665 Protein of unknown function (DUF3265) 115 134 2.1E-8 T 12-10-2018 IPR021681 Protein of unknown function DUF3265 Vc3S01_2894 254032b9cd5ae3b4a142d6b2417aae16 212 SUPERFAMILY SSF55068 2 207 8.89E-80 T 12-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Vc3S01_2894 254032b9cd5ae3b4a142d6b2417aae16 212 Gene3D G3DSA:3.30.1060.10 3 212 4.5E-92 T 12-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Vc3S01_2894 254032b9cd5ae3b4a142d6b2417aae16 212 Pfam PF01625 Peptide methionine sulfoxide reductase 44 197 1.9E-68 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Vc3S01_2894 254032b9cd5ae3b4a142d6b2417aae16 212 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 44 197 3.7E-68 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Vc3S01_2894 254032b9cd5ae3b4a142d6b2417aae16 212 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 42 203 38.566 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Vc3S01_A1072 4225c1062cb1e9418845e1573e8585c1 185 SMART SM00782 6 52 1.3E-29 T 12-10-2018 IPR013991 PhnA protein N-terminal, proteobacterial Vc3S01_A1072 4225c1062cb1e9418845e1573e8585c1 185 Pfam PF08274 PhnA Zinc-Ribbon 13 52 5.0E-11 T 12-10-2018 IPR013987 PhnA protein, N-terminal Vc3S01_A1072 4225c1062cb1e9418845e1573e8585c1 185 Pfam PF03831 PhnA domain 119 184 2.6E-22 T 12-10-2018 IPR013988 PhnA protein, C-terminal Vc3S01_A1072 4225c1062cb1e9418845e1573e8585c1 185 SUPERFAMILY SSF82057 117 184 3.85E-20 T 12-10-2018 Vc3S01_A1072 4225c1062cb1e9418845e1573e8585c1 185 Gene3D G3DSA:2.30.30.40 115 185 9.3E-24 T 12-10-2018 Vc3S01_0322 77c965bea92fffada10896c85223e5bb 366 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 360 74.9 T 12-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Vc3S01_0322 77c965bea92fffada10896c85223e5bb 366 PIRSF PIRSF001455 22 362 1.1E-107 T 12-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Vc3S01_0322 77c965bea92fffada10896c85223e5bb 366 Gene3D G3DSA:1.20.1090.10 177 366 6.5E-71 T 12-10-2018 Vc3S01_0322 77c965bea92fffada10896c85223e5bb 366 Gene3D G3DSA:3.40.50.1970 1 176 9.7E-66 T 12-10-2018 Vc3S01_0322 77c965bea92fffada10896c85223e5bb 366 Pfam PF01761 3-dehydroquinate synthase 72 329 2.8E-111 T 12-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Vc3S01_0322 77c965bea92fffada10896c85223e5bb 366 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 14 359 3.0E-120 T 12-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Vc3S01_0322 77c965bea92fffada10896c85223e5bb 366 SUPERFAMILY SSF56796 4 360 4.32E-118 T 12-10-2018 Vc3S01_A0196 24c314a762ef94225717241d89fee94b 290 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 25 282 1.0E-101 T 12-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Vc3S01_A0196 24c314a762ef94225717241d89fee94b 290 SUPERFAMILY SSF53613 21 283 1.04E-82 T 12-10-2018 IPR029056 Ribokinase-like Vc3S01_A0196 24c314a762ef94225717241d89fee94b 290 Pfam PF08543 Phosphomethylpyrimidine kinase 32 280 1.3E-94 T 12-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 Vc3S01_A0196 24c314a762ef94225717241d89fee94b 290 Gene3D G3DSA:3.40.1190.20 4 289 3.6E-103 T 12-10-2018 IPR029056 Ribokinase-like Vc3S01_0844 de0da78659b1e7d6ea13b146bc1938a1 376 PRINTS PR00207 Flagellin signature 37 54 3.4E-26 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Vc3S01_0844 de0da78659b1e7d6ea13b146bc1938a1 376 PRINTS PR00207 Flagellin signature 111 134 3.4E-26 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Vc3S01_0844 de0da78659b1e7d6ea13b146bc1938a1 376 PRINTS PR00207 Flagellin signature 76 95 3.4E-26 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Vc3S01_0844 de0da78659b1e7d6ea13b146bc1938a1 376 Gene3D G3DSA:1.20.58.1830 5 33 2.1E-71 T 12-10-2018 Vc3S01_0844 de0da78659b1e7d6ea13b146bc1938a1 376 Pfam PF00700 Bacterial flagellin C-terminal helical region 291 375 5.2E-26 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Vc3S01_0844 de0da78659b1e7d6ea13b146bc1938a1 376 SUPERFAMILY SSF64518 1 375 8.5E-95 T 12-10-2018 Vc3S01_0844 de0da78659b1e7d6ea13b146bc1938a1 376 Gene3D G3DSA:1.20.1330.10 192 327 5.4E-18 T 12-10-2018 Vc3S01_0844 de0da78659b1e7d6ea13b146bc1938a1 376 Pfam PF07196 Flagellin hook IN motif 195 248 6.2E-10 T 12-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 Vc3S01_0844 de0da78659b1e7d6ea13b146bc1938a1 376 Gene3D G3DSA:1.10.8.410 328 375 2.8E-20 T 12-10-2018 Vc3S01_0844 de0da78659b1e7d6ea13b146bc1938a1 376 Gene3D G3DSA:1.20.1330.10 45 179 2.1E-71 T 12-10-2018 Vc3S01_0844 de0da78659b1e7d6ea13b146bc1938a1 376 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 1.1E-41 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Vc3S01_1424 6e917cb831a4ecdeb89d977cf3612d3c 592 Gene3D G3DSA:3.40.50.300 329 589 2.2E-82 T 12-10-2018 Vc3S01_1424 6e917cb831a4ecdeb89d977cf3612d3c 592 Pfam PF00005 ABC transporter 353 501 3.5E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_1424 6e917cb831a4ecdeb89d977cf3612d3c 592 Pfam PF00664 ABC transporter transmembrane region 24 291 2.2E-43 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Vc3S01_1424 6e917cb831a4ecdeb89d977cf3612d3c 592 Gene3D G3DSA:1.20.1560.10 1 324 4.3E-73 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Vc3S01_1424 6e917cb831a4ecdeb89d977cf3612d3c 592 SUPERFAMILY SSF90123 8 322 4.97E-70 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Vc3S01_1424 6e917cb831a4ecdeb89d977cf3612d3c 592 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_1424 6e917cb831a4ecdeb89d977cf3612d3c 592 SMART SM00382 362 547 5.4E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_1424 6e917cb831a4ecdeb89d977cf3612d3c 592 SUPERFAMILY SSF52540 332 571 1.68E-77 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_1268 4bd79829092775582aea2db869dafdd6 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 369 396 8.6E-24 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Vc3S01_1268 4bd79829092775582aea2db869dafdd6 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 4 29 8.6E-24 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Vc3S01_1268 4bd79829092775582aea2db869dafdd6 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 398 427 8.6E-24 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Vc3S01_1268 4bd79829092775582aea2db869dafdd6 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 325 496 1.7E-40 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Vc3S01_1268 4bd79829092775582aea2db869dafdd6 541 SUPERFAMILY SSF58104 224 533 5.23E-63 T 12-10-2018 Vc3S01_1268 4bd79829092775582aea2db869dafdd6 541 Gene3D G3DSA:1.10.287.950 203 534 6.8E-64 T 12-10-2018 Vc3S01_1268 4bd79829092775582aea2db869dafdd6 541 SMART SM00304 203 256 1.5E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Vc3S01_1268 4bd79829092775582aea2db869dafdd6 541 SMART SM00283 271 532 1.1E-46 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Vc3S01_A1375 51624892b14e31b389c2af6ecf161d67 245 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 25 231 2.1E-57 T 12-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 Vc3S01_A1375 51624892b14e31b389c2af6ecf161d67 245 Pfam PF04973 Nicotinamide mononucleotide transporter 25 228 5.1E-54 T 12-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 Vc3S01_0399 97eaefb3540345442a5fff9ce614b954 189 Hamap MF_00528 Septum formation protein Maf [maf]. 6 189 29.337 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 Vc3S01_0399 97eaefb3540345442a5fff9ce614b954 189 Pfam PF02545 Maf-like protein 7 187 5.3E-59 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 Vc3S01_0399 97eaefb3540345442a5fff9ce614b954 189 TIGRFAM TIGR00172 maf: septum formation protein Maf 6 184 9.7E-55 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 Vc3S01_0399 97eaefb3540345442a5fff9ce614b954 189 Gene3D G3DSA:3.90.950.10 5 189 1.4E-69 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Vc3S01_0399 97eaefb3540345442a5fff9ce614b954 189 SUPERFAMILY SSF52972 6 187 2.16E-61 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Vc3S01_0399 97eaefb3540345442a5fff9ce614b954 189 PIRSF PIRSF006305 2 189 3.2E-57 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 Vc3S01_A1651 a202ad38a0a75566bf96c2033a4467c7 234 Pfam PF13091 PLD-like domain 102 225 2.8E-28 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Vc3S01_A1651 a202ad38a0a75566bf96c2033a4467c7 234 Gene3D G3DSA:3.30.870.10 48 233 3.9E-50 T 12-10-2018 Vc3S01_A1651 a202ad38a0a75566bf96c2033a4467c7 234 SUPERFAMILY SSF56024 91 226 1.82E-29 T 12-10-2018 Vc3S01_1906 b18941e2ff6e76e58fe4abcf983c7fdc 1011 SUPERFAMILY SSF56176 27 274 2.99E-50 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Vc3S01_1906 b18941e2ff6e76e58fe4abcf983c7fdc 1011 Gene3D G3DSA:3.30.70.2740 414 495 3.4E-5 T 12-10-2018 Vc3S01_1906 b18941e2ff6e76e58fe4abcf983c7fdc 1011 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 667 678 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Vc3S01_1906 b18941e2ff6e76e58fe4abcf983c7fdc 1011 SUPERFAMILY SSF46548 571 685 7.67E-7 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Vc3S01_1906 b18941e2ff6e76e58fe4abcf983c7fdc 1011 Pfam PF01565 FAD binding domain 52 191 8.5E-37 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Vc3S01_1906 b18941e2ff6e76e58fe4abcf983c7fdc 1011 SUPERFAMILY SSF55103 253 538 7.03E-53 T 12-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 Vc3S01_1906 b18941e2ff6e76e58fe4abcf983c7fdc 1011 Pfam PF02913 FAD linked oxidases, C-terminal domain 276 534 7.3E-63 T 12-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 Vc3S01_1906 b18941e2ff6e76e58fe4abcf983c7fdc 1011 Pfam PF13183 4Fe-4S dicluster domain 570 681 4.7E-12 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Vc3S01_1906 b18941e2ff6e76e58fe4abcf983c7fdc 1011 Gene3D G3DSA:3.30.465.40 17 209 3.7E-48 T 12-10-2018 Vc3S01_A0868 902f8948d9fd8c9792610c2d5c2fd941 275 SUPERFAMILY SSF46894 4 97 9.92E-13 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Vc3S01_A0868 902f8948d9fd8c9792610c2d5c2fd941 275 Pfam PF00486 Transcriptional regulatory protein, C terminal 24 96 1.8E-9 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Vc3S01_A0868 902f8948d9fd8c9792610c2d5c2fd941 275 Gene3D G3DSA:1.10.10.10 1 114 1.4E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A0868 902f8948d9fd8c9792610c2d5c2fd941 275 SMART SM00862 23 97 3.2E-8 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Vc3S01_0934 f6a5c6e8dc27b3c02b655e499403746b 146 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 1 144 41.382 T 12-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 Vc3S01_0934 f6a5c6e8dc27b3c02b655e499403746b 146 PIRSF PIRSF006173 1 144 1.3E-65 T 12-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 Vc3S01_0934 f6a5c6e8dc27b3c02b655e499403746b 146 Pfam PF03692 Putative zinc- or iron-chelating domain 23 91 1.2E-8 T 12-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein Vc3S01_A0515 c27b8de92ca70075a3c5434910dd1704 122 Pfam PF13564 DoxX-like family 4 110 3.5E-18 T 12-10-2018 IPR032808 DoxX family Vc3S01_2479 fd9d0f17c42654dd8b7f8b4da09a39d4 141 Pfam PF05130 FlgN protein 2 131 3.8E-26 T 12-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 Vc3S01_2479 fd9d0f17c42654dd8b7f8b4da09a39d4 141 Gene3D G3DSA:1.20.58.300 1 113 4.7E-7 T 12-10-2018 Vc3S01_2479 fd9d0f17c42654dd8b7f8b4da09a39d4 141 SUPERFAMILY SSF140566 1 113 7.45E-23 T 12-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 Vc3S01_1921 6f5714756e7540db2d4e558d03741531 456 Pfam PF00939 Sodium:sulfate symporter transmembrane region 38 456 8.2E-57 T 12-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 Vc3S01_1921 6f5714756e7540db2d4e558d03741531 456 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 406 422 - T 12-10-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 Vc3S01_1921 6f5714756e7540db2d4e558d03741531 456 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 38 456 6.7E-109 T 12-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 Vc3S01_0496 02fe49bee70f73d50587f53ebe37d6bd 218 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 33.36 T 12-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 Vc3S01_0496 02fe49bee70f73d50587f53ebe37d6bd 218 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 213 2.6E-57 T 12-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 Vc3S01_0496 02fe49bee70f73d50587f53ebe37d6bd 218 Gene3D G3DSA:3.30.70.260 125 196 1.4E-77 T 12-10-2018 Vc3S01_0496 02fe49bee70f73d50587f53ebe37d6bd 218 SUPERFAMILY SSF100950 1 146 2.56E-46 T 12-10-2018 IPR037171 NagB/RpiA transferase-like Vc3S01_0496 02fe49bee70f73d50587f53ebe37d6bd 218 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 214 2.6E-68 T 12-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 Vc3S01_0496 02fe49bee70f73d50587f53ebe37d6bd 218 Gene3D G3DSA:3.40.50.1360 7 207 1.4E-77 T 12-10-2018 Vc3S01_0496 02fe49bee70f73d50587f53ebe37d6bd 218 SUPERFAMILY SSF75445 127 198 1.27E-23 T 12-10-2018 Vc3S01_A1542 216761c46dbf943fd520c1ed9eea76bb 308 SUPERFAMILY SSF52540 5 227 3.44E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A1542 216761c46dbf943fd520c1ed9eea76bb 308 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_A1542 216761c46dbf943fd520c1ed9eea76bb 308 SMART SM00382 30 212 1.8E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_A1542 216761c46dbf943fd520c1ed9eea76bb 308 Gene3D G3DSA:3.40.50.300 2 243 1.2E-70 T 12-10-2018 Vc3S01_A1542 216761c46dbf943fd520c1ed9eea76bb 308 Pfam PF00005 ABC transporter 22 165 2.1E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_3208 15c7c25fc4462a65d17ce00a75bee350 177 SUPERFAMILY SSF47928 3 105 7.06E-28 T 12-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_3208 15c7c25fc4462a65d17ce00a75bee350 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 1.4E-64 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_3208 15c7c25fc4462a65d17ce00a75bee350 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 175 4.3E-52 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_3208 15c7c25fc4462a65d17ce00a75bee350 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 8.2E-28 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_3208 15c7c25fc4462a65d17ce00a75bee350 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 8.2E-28 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_3208 15c7c25fc4462a65d17ce00a75bee350 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 8.2E-28 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_3208 15c7c25fc4462a65d17ce00a75bee350 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 8.2E-28 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_3208 15c7c25fc4462a65d17ce00a75bee350 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 8.2E-28 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_3208 15c7c25fc4462a65d17ce00a75bee350 177 Gene3D G3DSA:1.10.520.20 2 106 1.3E-38 T 12-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_3208 15c7c25fc4462a65d17ce00a75bee350 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 18.713 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_3208 15c7c25fc4462a65d17ce00a75bee350 177 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 12-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_p30130 2b23b36d2bcaec2fcdd3a6202352de25 94 Pfam PF04226 Transglycosylase associated protein 46 89 1.2E-8 T 12-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 Vc3S01_A0138 25f6a647d39125cc857a86bb6af75c23 204 SUPERFAMILY SSF56784 6 194 1.77E-21 T 12-10-2018 IPR036412 HAD-like superfamily Vc3S01_A0138 25f6a647d39125cc857a86bb6af75c23 204 Gene3D G3DSA:3.40.50.1000 9 196 9.8E-34 T 12-10-2018 IPR023214 HAD superfamily Vc3S01_A0138 25f6a647d39125cc857a86bb6af75c23 204 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 9 192 5.8E-25 T 12-10-2018 Vc3S01_A0138 25f6a647d39125cc857a86bb6af75c23 204 Gene3D G3DSA:1.20.1440.100 21 93 9.8E-34 T 12-10-2018 Vc3S01_A0138 25f6a647d39125cc857a86bb6af75c23 204 Pfam PF12710 haloacid dehalogenase-like hydrolase 10 190 3.3E-29 T 12-10-2018 Vc3S01_A0138 25f6a647d39125cc857a86bb6af75c23 204 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 9 196 2.4E-35 T 12-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like Vc3S01_2263 f15ce9274f518ddf1267a7034446f9ad 752 Pfam PF03772 Competence protein 208 465 1.1E-52 T 12-10-2018 IPR004477 ComEC/Rec2-related protein Vc3S01_2263 f15ce9274f518ddf1267a7034446f9ad 752 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 133 718 2.6E-120 T 12-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 Vc3S01_2263 f15ce9274f518ddf1267a7034446f9ad 752 SMART SM00849 506 689 3.4E-6 T 12-10-2018 IPR001279 Metallo-beta-lactamase Vc3S01_2263 f15ce9274f518ddf1267a7034446f9ad 752 Pfam PF00753 Metallo-beta-lactamase superfamily 504 670 2.3E-6 T 12-10-2018 IPR001279 Metallo-beta-lactamase Vc3S01_2263 f15ce9274f518ddf1267a7034446f9ad 752 SUPERFAMILY SSF56281 495 737 4.33E-39 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Vc3S01_2263 f15ce9274f518ddf1267a7034446f9ad 752 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 230 406 3.5E-29 T 12-10-2018 IPR004477 ComEC/Rec2-related protein Vc3S01_2263 f15ce9274f518ddf1267a7034446f9ad 752 Gene3D G3DSA:3.60.15.10 494 731 6.7E-46 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Vc3S01_A0633 ae47ed65fd1e6382e799d4f4830a058c 309 SUPERFAMILY SSF52540 54 307 2.91E-15 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A0633 ae47ed65fd1e6382e799d4f4830a058c 309 Gene3D G3DSA:3.40.50.300 54 219 2.4E-9 T 12-10-2018 Vc3S01_A0633 ae47ed65fd1e6382e799d4f4830a058c 309 Pfam PF13401 AAA domain 75 208 5.6E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_1762 a03550104ab1e687e67e4036352ad10c 229 SUPERFAMILY SSF51366 5 222 9.73E-55 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Vc3S01_1762 a03550104ab1e687e67e4036352ad10c 229 Pfam PF04131 Putative N-acetylmannosamine-6-phosphate epimerase 27 223 2.4E-66 T 12-10-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 Vc3S01_1762 a03550104ab1e687e67e4036352ad10c 229 Hamap MF_01235 Putative N-acetylmannosamine-6-phosphate 2-epimerase [nanE]. 3 223 37.065 T 12-10-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 Vc3S01_1762 a03550104ab1e687e67e4036352ad10c 229 Gene3D G3DSA:3.20.20.70 1 222 9.8E-89 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_A1078 a55e522ec3a2e7cd9ab77563e121859e 145 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 20 135 6.3E-39 T 12-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 Vc3S01_A1078 a55e522ec3a2e7cd9ab77563e121859e 145 SUPERFAMILY SSF54637 1 139 6.47E-32 T 12-10-2018 IPR029069 HotDog domain superfamily Vc3S01_A1078 a55e522ec3a2e7cd9ab77563e121859e 145 Gene3D G3DSA:3.10.129.10 1 143 4.7E-57 T 12-10-2018 Vc3S01_A1078 a55e522ec3a2e7cd9ab77563e121859e 145 Pfam PF03061 Thioesterase superfamily 52 128 6.3E-16 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 Vc3S01_A0877 f881a50ecbaa5baa16758756531026c7 384 SUPERFAMILY SSF47203 225 377 1.77E-59 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Vc3S01_A0877 f881a50ecbaa5baa16758756531026c7 384 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 215 4.2E-26 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 Vc3S01_A0877 f881a50ecbaa5baa16758756531026c7 384 SUPERFAMILY SSF56645 1 240 2.75E-82 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Vc3S01_A0877 f881a50ecbaa5baa16758756531026c7 384 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 7.5E-30 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Vc3S01_A0877 f881a50ecbaa5baa16758756531026c7 384 Gene3D G3DSA:1.10.540.10 1 118 6.6E-37 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Vc3S01_A0877 f881a50ecbaa5baa16758756531026c7 384 Gene3D G3DSA:1.20.140.10 233 378 1.4E-54 T 12-10-2018 Vc3S01_A0877 f881a50ecbaa5baa16758756531026c7 384 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Vc3S01_A0877 f881a50ecbaa5baa16758756531026c7 384 Gene3D G3DSA:2.40.110.10 121 232 4.0E-42 T 12-10-2018 Vc3S01_A0877 f881a50ecbaa5baa16758756531026c7 384 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 335 354 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Vc3S01_A0877 f881a50ecbaa5baa16758756531026c7 384 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 377 1.5E-50 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Vc3S01_A0877 f881a50ecbaa5baa16758756531026c7 384 PIRSF PIRSF016578 207 381 1.0E-13 T 12-10-2018 Vc3S01_A0877 f881a50ecbaa5baa16758756531026c7 384 PIRSF PIRSF016578 4 193 5.3E-12 T 12-10-2018 Vc3S01_0197 aaf326120edcb3c19c08d89b948d900f 608 Gene3D G3DSA:3.10.580.10 141 288 2.4E-17 T 12-10-2018 Vc3S01_0197 aaf326120edcb3c19c08d89b948d900f 608 SUPERFAMILY SSF54631 144 276 2.36E-16 T 12-10-2018 Vc3S01_0197 aaf326120edcb3c19c08d89b948d900f 608 Gene3D G3DSA:2.60.120.10 5 140 1.3E-11 T 12-10-2018 IPR014710 RmlC-like jelly roll fold Vc3S01_0197 aaf326120edcb3c19c08d89b948d900f 608 SUPERFAMILY SSF51206 8 130 3.01E-16 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like Vc3S01_0197 aaf326120edcb3c19c08d89b948d900f 608 Pfam PF00027 Cyclic nucleotide-binding domain 31 113 2.4E-8 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain Vc3S01_0197 aaf326120edcb3c19c08d89b948d900f 608 Pfam PF03445 Putative nucleotidyltransferase DUF294 302 433 1.0E-41 T 12-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 Vc3S01_0197 aaf326120edcb3c19c08d89b948d900f 608 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 472 604 2.2E-39 T 12-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding Vc3S01_A1845 33931360d8b3fc07945edbb98d424807 722 Pfam PF13807 G-rich domain on putative tyrosine kinase 369 450 6.1E-35 T 12-10-2018 IPR032807 Tyrosine kinase, G-rich domain Vc3S01_A1845 33931360d8b3fc07945edbb98d424807 722 Gene3D G3DSA:3.40.50.300 442 722 6.8E-79 T 12-10-2018 Vc3S01_A1845 33931360d8b3fc07945edbb98d424807 722 Pfam PF13614 AAA domain 540 652 2.9E-12 T 12-10-2018 IPR025669 AAA domain Vc3S01_A1845 33931360d8b3fc07945edbb98d424807 722 SUPERFAMILY SSF52540 528 707 1.16E-35 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A1845 33931360d8b3fc07945edbb98d424807 722 Pfam PF02706 Chain length determinant protein 14 106 4.7E-19 T 12-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 Vc3S01_A1845 33931360d8b3fc07945edbb98d424807 722 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 510 714 3.1E-51 T 12-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 Vc3S01_0531 b230ba6854af30ce0add24d8e97514c0 307 Pfam PF01476 LysM domain 49 91 5.6E-12 T 12-10-2018 IPR018392 LysM domain Vc3S01_0531 b230ba6854af30ce0add24d8e97514c0 307 Gene3D G3DSA:2.70.70.10 141 307 1.7E-37 T 12-10-2018 IPR011055 Duplicated hybrid motif Vc3S01_0531 b230ba6854af30ce0add24d8e97514c0 307 SMART SM00257 48 92 5.4E-11 T 12-10-2018 IPR018392 LysM domain Vc3S01_0531 b230ba6854af30ce0add24d8e97514c0 307 SUPERFAMILY SSF51261 48 306 1.62E-51 T 12-10-2018 IPR011055 Duplicated hybrid motif Vc3S01_0531 b230ba6854af30ce0add24d8e97514c0 307 Pfam PF01551 Peptidase family M23 208 302 1.4E-31 T 12-10-2018 IPR016047 Peptidase M23 Vc3S01_0531 b230ba6854af30ce0add24d8e97514c0 307 Gene3D G3DSA:3.10.350.10 35 100 1.3E-11 T 12-10-2018 IPR036779 LysM domain superfamily Vc3S01_1862 411d18ac1b2fa62653da49dd14798fb2 317 Pfam PF01032 FecCD transport family 27 312 1.4E-32 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Vc3S01_1862 411d18ac1b2fa62653da49dd14798fb2 317 Gene3D G3DSA:1.10.3470.10 3 316 1.4E-34 T 12-10-2018 IPR037294 ABC transporter, BtuC-like Vc3S01_1862 411d18ac1b2fa62653da49dd14798fb2 317 SUPERFAMILY SSF81345 10 312 1.83E-37 T 12-10-2018 IPR037294 ABC transporter, BtuC-like Vc3S01_A2011 494e1363d6c644a2cb4909b444dbd31b 174 Pfam PF10688 Bacterial inner membrane protein 4 160 1.5E-54 T 12-10-2018 IPR019629 Uncharacterised protein family HI1736/YgjV Vc3S01_A2011 494e1363d6c644a2cb4909b444dbd31b 174 PIRSF PIRSF011443 1 174 1.4E-48 T 12-10-2018 IPR026267 Inner membrane protein YgjV Vc3S01_1151 1b463b4a67e7baeb7dcab88e405e7627 414 Pfam PF02687 FtsX-like permease family 315 406 1.5E-13 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Vc3S01_1151 1b463b4a67e7baeb7dcab88e405e7627 414 Pfam PF12704 MacB-like periplasmic core domain 29 247 2.2E-23 T 12-10-2018 IPR025857 MacB-like periplasmic core domain Vc3S01_3018 529e728378247c0ce73ae4f47686fc20 317 SUPERFAMILY SSF103481 40 141 5.23E-13 T 12-10-2018 Vc3S01_3018 529e728378247c0ce73ae4f47686fc20 317 Pfam PF00892 EamA-like transporter family 6 139 7.7E-25 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Vc3S01_3018 529e728378247c0ce73ae4f47686fc20 317 Pfam PF00892 EamA-like transporter family 154 286 1.4E-13 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Vc3S01_A0593 91a8cbd2aa7b7fb6abb46755c677fbb7 310 SUPERFAMILY SSF55347 121 264 2.81E-47 T 12-10-2018 Vc3S01_A0593 91a8cbd2aa7b7fb6abb46755c677fbb7 310 Gene3D G3DSA:3.30.360.10 119 310 8.3E-57 T 12-10-2018 Vc3S01_A0593 91a8cbd2aa7b7fb6abb46755c677fbb7 310 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 1 118 4.2E-15 T 12-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Vc3S01_A0593 91a8cbd2aa7b7fb6abb46755c677fbb7 310 SUPERFAMILY SSF51735 1 165 1.16E-38 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_A0593 91a8cbd2aa7b7fb6abb46755c677fbb7 310 Gene3D G3DSA:3.40.50.720 1 118 1.4E-27 T 12-10-2018 Vc3S01_A0411 16cf44ddccd5db99d505a3170801d904 301 SUPERFAMILY SSF103473 2 285 1.96E-31 T 12-10-2018 IPR036259 MFS transporter superfamily Vc3S01_A0411 16cf44ddccd5db99d505a3170801d904 301 Gene3D G3DSA:1.20.1250.20 1 290 9.7E-26 T 12-10-2018 Vc3S01_A0411 16cf44ddccd5db99d505a3170801d904 301 Pfam PF07690 Major Facilitator Superfamily 2 252 1.8E-15 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Vc3S01_0155 3ee09cc9c2fdebe7af4337680f82f23d 126 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 72 100 - T 12-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Vc3S01_0155 3ee09cc9c2fdebe7af4337680f82f23d 126 PRINTS PR01650 Bacterial translocase SecE signature 66 86 7.1E-41 T 12-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 Vc3S01_0155 3ee09cc9c2fdebe7af4337680f82f23d 126 PRINTS PR01650 Bacterial translocase SecE signature 45 66 7.1E-41 T 12-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 Vc3S01_0155 3ee09cc9c2fdebe7af4337680f82f23d 126 PRINTS PR01650 Bacterial translocase SecE signature 90 110 7.1E-41 T 12-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 Vc3S01_0155 3ee09cc9c2fdebe7af4337680f82f23d 126 PRINTS PR01650 Bacterial translocase SecE signature 110 126 7.1E-41 T 12-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 Vc3S01_0155 3ee09cc9c2fdebe7af4337680f82f23d 126 Gene3D G3DSA:1.20.5.1030 67 123 1.6E-17 T 12-10-2018 IPR038379 SecE superfamily Vc3S01_0155 3ee09cc9c2fdebe7af4337680f82f23d 126 Hamap MF_00422 Protein translocase subunit SecE [secE]. 67 122 13.376 T 12-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Vc3S01_0155 3ee09cc9c2fdebe7af4337680f82f23d 126 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 70 122 1.5E-17 T 12-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 Vc3S01_0155 3ee09cc9c2fdebe7af4337680f82f23d 126 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 71 121 1.6E-20 T 12-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Vc3S01_1804 bd03cf9399db3ce4b62319c27bf715bb 224 Pfam PF00027 Cyclic nucleotide-binding domain 34 120 5.9E-13 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain Vc3S01_1804 bd03cf9399db3ce4b62319c27bf715bb 224 SUPERFAMILY SSF51206 30 142 1.96E-20 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like Vc3S01_1804 bd03cf9399db3ce4b62319c27bf715bb 224 Gene3D G3DSA:2.60.120.1460 24 224 7.7E-18 T 12-10-2018 Vc3S01_A0478 f63b9ab2b3757a6fee56c6bfb267e006 572 ProSitePatterns PS00211 ABC transporters family signature. 463 477 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_A0478 f63b9ab2b3757a6fee56c6bfb267e006 572 Pfam PF00005 ABC transporter 343 490 4.9E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_A0478 f63b9ab2b3757a6fee56c6bfb267e006 572 SUPERFAMILY SSF90123 18 307 1.09E-35 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Vc3S01_A0478 f63b9ab2b3757a6fee56c6bfb267e006 572 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 22 552 5.8E-183 T 12-10-2018 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 Vc3S01_A0478 f63b9ab2b3757a6fee56c6bfb267e006 572 SUPERFAMILY SSF52540 315 550 1.14E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A0478 f63b9ab2b3757a6fee56c6bfb267e006 572 Gene3D G3DSA:3.40.50.300 311 556 5.9E-65 T 12-10-2018 Vc3S01_A0478 f63b9ab2b3757a6fee56c6bfb267e006 572 Gene3D G3DSA:1.20.1560.10 5 310 5.5E-26 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Vc3S01_A0478 f63b9ab2b3757a6fee56c6bfb267e006 572 SMART SM00382 352 564 5.7E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_0200 97dbad290c2795212c7cd8e1df4a43b3 461 ProSitePatterns PS00163 Fumarate lyases signature. 312 321 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 Vc3S01_0200 97dbad290c2795212c7cd8e1df4a43b3 461 Gene3D G3DSA:1.10.40.30 403 454 2.4E-18 T 12-10-2018 Vc3S01_0200 97dbad290c2795212c7cd8e1df4a43b3 461 Hamap MF_00743 Fumarate hydratase class II [fumC]. 5 457 74.938 T 12-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Vc3S01_0200 97dbad290c2795212c7cd8e1df4a43b3 461 Gene3D G3DSA:1.20.200.10 134 400 7.1E-96 T 12-10-2018 Vc3S01_0200 97dbad290c2795212c7cd8e1df4a43b3 461 Gene3D G3DSA:1.10.275.10 6 133 3.6E-49 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal Vc3S01_0200 97dbad290c2795212c7cd8e1df4a43b3 461 Pfam PF10415 Fumarase C C-terminus 403 455 1.3E-18 T 12-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Vc3S01_0200 97dbad290c2795212c7cd8e1df4a43b3 461 Pfam PF00206 Lyase 13 337 1.7E-92 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal Vc3S01_0200 97dbad290c2795212c7cd8e1df4a43b3 461 PRINTS PR00145 Argininosuccinate lyase family signature 170 190 5.8E-6 T 12-10-2018 Vc3S01_0200 97dbad290c2795212c7cd8e1df4a43b3 461 PRINTS PR00145 Argininosuccinate lyase family signature 128 150 5.8E-6 T 12-10-2018 Vc3S01_0200 97dbad290c2795212c7cd8e1df4a43b3 461 PRINTS PR00145 Argininosuccinate lyase family signature 312 328 5.8E-6 T 12-10-2018 Vc3S01_0200 97dbad290c2795212c7cd8e1df4a43b3 461 SUPERFAMILY SSF48557 5 455 1.08E-136 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 Vc3S01_0200 97dbad290c2795212c7cd8e1df4a43b3 461 PRINTS PR00149 Fumarate lyase superfamily signature 175 193 1.2E-31 T 12-10-2018 IPR000362 Fumarate lyase family Vc3S01_0200 97dbad290c2795212c7cd8e1df4a43b3 461 PRINTS PR00149 Fumarate lyase superfamily signature 266 293 1.2E-31 T 12-10-2018 IPR000362 Fumarate lyase family Vc3S01_0200 97dbad290c2795212c7cd8e1df4a43b3 461 PRINTS PR00149 Fumarate lyase superfamily signature 129 147 1.2E-31 T 12-10-2018 IPR000362 Fumarate lyase family Vc3S01_0200 97dbad290c2795212c7cd8e1df4a43b3 461 PRINTS PR00149 Fumarate lyase superfamily signature 312 328 1.2E-31 T 12-10-2018 IPR000362 Fumarate lyase family Vc3S01_A1900 bff6dbd4cb338943a483f353ae955193 276 Pfam PF07148 Maltose operon periplasmic protein precursor (MalM) 67 198 1.1E-32 T 12-10-2018 IPR010794 Maltose operon periplasmic GO:0008643|GO:0042597 Vc3S01_1956 10a6f9443034388f4421fc6c5e0fd4e3 761 Gene3D G3DSA:2.40.110.10 177 300 7.1E-90 T 12-10-2018 Vc3S01_1956 10a6f9443034388f4421fc6c5e0fd4e3 761 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 301 447 4.8E-8 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Vc3S01_1956 10a6f9443034388f4421fc6c5e0fd4e3 761 SUPERFAMILY SSF56645 60 296 2.62E-46 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Vc3S01_1956 10a6f9443034388f4421fc6c5e0fd4e3 761 Gene3D G3DSA:1.20.140.10 301 446 7.1E-90 T 12-10-2018 Vc3S01_1956 10a6f9443034388f4421fc6c5e0fd4e3 761 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 66 173 4.2E-14 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Vc3S01_1956 10a6f9443034388f4421fc6c5e0fd4e3 761 SUPERFAMILY SSF47203 301 453 1.26E-20 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Vc3S01_1956 10a6f9443034388f4421fc6c5e0fd4e3 761 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 178 277 1.9E-9 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 Vc3S01_1956 10a6f9443034388f4421fc6c5e0fd4e3 761 Pfam PF09317 Domain of unknown function (DUF1974) 455 739 2.9E-111 T 12-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 Vc3S01_1956 10a6f9443034388f4421fc6c5e0fd4e3 761 Gene3D G3DSA:1.10.540.10 63 176 7.1E-90 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Vc3S01_2437 f7a011d6553e6f3bad49d141e8abcccc 284 Pfam PF14561 Tetratricopeptide repeat 195 284 1.2E-29 T 12-10-2018 Vc3S01_2437 f7a011d6553e6f3bad49d141e8abcccc 284 Pfam PF14559 Tetratricopeptide repeat 124 190 2.2E-15 T 12-10-2018 Vc3S01_2437 f7a011d6553e6f3bad49d141e8abcccc 284 Gene3D G3DSA:1.25.40.10 112 196 2.3E-23 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_2437 f7a011d6553e6f3bad49d141e8abcccc 284 Gene3D G3DSA:1.25.40.10 197 284 5.4E-24 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_2437 f7a011d6553e6f3bad49d141e8abcccc 284 Pfam PF00085 Thioredoxin 6 109 8.6E-16 T 12-10-2018 IPR013766 Thioredoxin domain GO:0045454 Vc3S01_2437 f7a011d6553e6f3bad49d141e8abcccc 284 SUPERFAMILY SSF52833 3 111 1.74E-26 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Vc3S01_2437 f7a011d6553e6f3bad49d141e8abcccc 284 SUPERFAMILY SSF48452 112 246 3.32E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_2437 f7a011d6553e6f3bad49d141e8abcccc 284 Gene3D G3DSA:3.40.30.10 2 111 2.3E-23 T 12-10-2018 Vc3S01_A0890 574ed55985d1d8004a7483de6d17fdaf 298 SUPERFAMILY SSF53850 89 290 2.39E-34 T 12-10-2018 Vc3S01_A0890 574ed55985d1d8004a7483de6d17fdaf 298 Pfam PF03466 LysR substrate binding domain 88 285 3.8E-36 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_A0890 574ed55985d1d8004a7483de6d17fdaf 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 7.9E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A0890 574ed55985d1d8004a7483de6d17fdaf 298 SUPERFAMILY SSF46785 2 111 7.48E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A0890 574ed55985d1d8004a7483de6d17fdaf 298 Gene3D G3DSA:1.10.10.10 1 83 3.9E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A0890 574ed55985d1d8004a7483de6d17fdaf 298 Gene3D G3DSA:3.40.190.290 91 296 1.1E-35 T 12-10-2018 Vc3S01_0507 9252dbc2d14f5ce5070c87ddb4944b0e 535 SUPERFAMILY SSF46977 425 524 2.62E-32 T 12-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Vc3S01_0507 9252dbc2d14f5ce5070c87ddb4944b0e 535 Gene3D G3DSA:1.20.58.100 425 535 7.5E-45 T 12-10-2018 Vc3S01_0507 9252dbc2d14f5ce5070c87ddb4944b0e 535 PIRSF PIRSF000171 336 532 3.4E-14 T 12-10-2018 Vc3S01_0507 9252dbc2d14f5ce5070c87ddb4944b0e 535 PIRSF PIRSF000171 1 250 2.9E-28 T 12-10-2018 Vc3S01_0507 9252dbc2d14f5ce5070c87ddb4944b0e 535 Gene3D G3DSA:3.50.50.60 10 404 2.9E-154 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_0507 9252dbc2d14f5ce5070c87ddb4944b0e 535 Pfam PF02910 Fumarate reductase flavoprotein C-term 441 522 8.0E-15 T 12-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Vc3S01_0507 9252dbc2d14f5ce5070c87ddb4944b0e 535 Pfam PF00890 FAD binding domain 10 392 1.2E-101 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Vc3S01_0507 9252dbc2d14f5ce5070c87ddb4944b0e 535 Gene3D G3DSA:3.90.700.10 248 358 2.9E-154 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Vc3S01_0507 9252dbc2d14f5ce5070c87ddb4944b0e 535 SUPERFAMILY SSF51905 5 447 1.71E-75 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_0507 9252dbc2d14f5ce5070c87ddb4944b0e 535 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 355 377 7.6E-9 T 12-10-2018 Vc3S01_0507 9252dbc2d14f5ce5070c87ddb4944b0e 535 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 7.6E-9 T 12-10-2018 Vc3S01_0507 9252dbc2d14f5ce5070c87ddb4944b0e 535 SUPERFAMILY SSF56425 238 353 1.79E-42 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Vc3S01_0507 9252dbc2d14f5ce5070c87ddb4944b0e 535 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 7 520 1.2E-210 T 12-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 Vc3S01_p40101 76594f24e1dfed6c204c3574a023329b 756 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 100 573 2.7E-95 T 12-10-2018 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 Vc3S01_p40101 76594f24e1dfed6c204c3574a023329b 756 Gene3D G3DSA:3.40.50.300 325 570 2.0E-31 T 12-10-2018 Vc3S01_p40101 76594f24e1dfed6c204c3574a023329b 756 SUPERFAMILY SSF52540 122 574 7.96E-33 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A0465 da1cf7427c0d536f33d2da4f3a174ee3 605 Pfam PF13519 von Willebrand factor type A domain 88 193 1.1E-13 T 12-10-2018 IPR002035 von Willebrand factor, type A Vc3S01_A0465 da1cf7427c0d536f33d2da4f3a174ee3 605 Gene3D G3DSA:3.40.50.410 84 284 4.9E-34 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Vc3S01_A0465 da1cf7427c0d536f33d2da4f3a174ee3 605 SMART SM00327 84 284 2.3E-7 T 12-10-2018 IPR002035 von Willebrand factor, type A Vc3S01_A0465 da1cf7427c0d536f33d2da4f3a174ee3 605 SUPERFAMILY SSF48452 346 446 3.34E-13 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_A0465 da1cf7427c0d536f33d2da4f3a174ee3 605 Gene3D G3DSA:1.25.40.10 337 457 3.3E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_A0465 da1cf7427c0d536f33d2da4f3a174ee3 605 SUPERFAMILY SSF53300 87 271 3.97E-20 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Vc3S01_1699 42cbdada380b90755cd6eb7724f48e64 302 Hamap MF_01271 N-acetyl-D-glucosamine kinase [nagK]. 1 302 63.772 T 12-10-2018 IPR023505 N-acetyl-D-glucosamine kinase GO:0045127 KEGG: 00520+2.7.1.59|MetaCyc: PWY-6517|MetaCyc: PWY-6906 Vc3S01_1699 42cbdada380b90755cd6eb7724f48e64 302 Gene3D G3DSA:3.30.420.40 119 290 1.4E-99 T 12-10-2018 Vc3S01_1699 42cbdada380b90755cd6eb7724f48e64 302 Gene3D G3DSA:3.30.420.40 4 297 1.4E-99 T 12-10-2018 Vc3S01_1699 42cbdada380b90755cd6eb7724f48e64 302 ProSitePatterns PS01125 ROK family signature. 130 157 - T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Vc3S01_1699 42cbdada380b90755cd6eb7724f48e64 302 SUPERFAMILY SSF53067 1 299 9.48E-56 T 12-10-2018 Vc3S01_1699 42cbdada380b90755cd6eb7724f48e64 302 Pfam PF00480 ROK family 2 300 1.5E-71 T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Vc3S01_A0277 6b2fa6fe5be4d2cbe844d7e5baf34cad 302 SUPERFAMILY SSF53850 89 294 5.74E-50 T 12-10-2018 Vc3S01_A0277 6b2fa6fe5be4d2cbe844d7e5baf34cad 302 Pfam PF03466 LysR substrate binding domain 88 292 2.4E-49 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_A0277 6b2fa6fe5be4d2cbe844d7e5baf34cad 302 Gene3D G3DSA:1.10.10.10 3 91 1.8E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A0277 6b2fa6fe5be4d2cbe844d7e5baf34cad 302 Gene3D G3DSA:3.40.190.10 163 263 2.0E-71 T 12-10-2018 Vc3S01_A0277 6b2fa6fe5be4d2cbe844d7e5baf34cad 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 1.7E-21 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A0277 6b2fa6fe5be4d2cbe844d7e5baf34cad 302 SUPERFAMILY SSF46785 7 112 7.98E-24 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A0277 6b2fa6fe5be4d2cbe844d7e5baf34cad 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.4E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A0277 6b2fa6fe5be4d2cbe844d7e5baf34cad 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.4E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A0277 6b2fa6fe5be4d2cbe844d7e5baf34cad 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.4E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A0277 6b2fa6fe5be4d2cbe844d7e5baf34cad 302 Gene3D G3DSA:3.40.190.10 92 289 2.0E-71 T 12-10-2018 Vc3S01_A1720 3244070806c9880b74b78574e3b644b4 145 SMART SM00422 3 71 1.5E-25 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Vc3S01_A1720 3244070806c9880b74b78574e3b644b4 145 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 2.1E-13 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Vc3S01_A1720 3244070806c9880b74b78574e3b644b4 145 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 2.1E-13 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Vc3S01_A1720 3244070806c9880b74b78574e3b644b4 145 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 2.1E-13 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Vc3S01_A1720 3244070806c9880b74b78574e3b644b4 145 SUPERFAMILY SSF46955 4 124 1.1E-28 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily Vc3S01_A1720 3244070806c9880b74b78574e3b644b4 145 Pfam PF09278 MerR, DNA binding 45 110 5.6E-18 T 12-10-2018 IPR015358 Transcription regulator MerR, DNA binding Vc3S01_A1720 3244070806c9880b74b78574e3b644b4 145 Pfam PF00376 MerR family regulatory protein 4 40 2.9E-13 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Vc3S01_A1720 3244070806c9880b74b78574e3b644b4 145 Gene3D G3DSA:1.10.1660.10 1 126 1.5E-33 T 12-10-2018 Vc3S01_A1720 3244070806c9880b74b78574e3b644b4 145 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 2 141 1.4E-67 T 12-10-2018 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 Vc3S01_A1720 3244070806c9880b74b78574e3b644b4 145 ProSitePatterns PS00552 MerR-type HTH domain signature. 6 28 - T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Vc3S01_A0429 5560da9d95596b4001ac89ee7873721e 256 Gene3D G3DSA:3.30.70.20 139 223 8.6E-10 T 12-10-2018 Vc3S01_A0429 5560da9d95596b4001ac89ee7873721e 256 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 11 42 0.0012 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Vc3S01_A0429 5560da9d95596b4001ac89ee7873721e 256 SUPERFAMILY SSF54862 63 209 9.07E-25 T 12-10-2018 Vc3S01_A0429 5560da9d95596b4001ac89ee7873721e 256 Pfam PF12800 4Fe-4S binding domain 188 200 0.74 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Vc3S01_A0429 5560da9d95596b4001ac89ee7873721e 256 Pfam PF12800 4Fe-4S binding domain 141 159 0.027 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Vc3S01_A0429 5560da9d95596b4001ac89ee7873721e 256 Gene3D G3DSA:3.30.70.20 60 136 3.8E-10 T 12-10-2018 Vc3S01_A0429 5560da9d95596b4001ac89ee7873721e 256 TIGRFAM TIGR00397 mauM_napG: MauM/NapG family ferredoxin-type protein 11 221 1.0E-78 T 12-10-2018 IPR004494 MauM/NapG ferredoxin-type protein Vc3S01_A0429 5560da9d95596b4001ac89ee7873721e 256 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 65 76 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Vc3S01_A0429 5560da9d95596b4001ac89ee7873721e 256 Pfam PF12838 4Fe-4S dicluster domain 64 119 5.7E-8 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Vc3S01_0479 973052c0a27ef00649cb88142b4f511e 316 Hamap MF_00162 Glutathione synthetase [gshB]. 1 316 178.09 T 12-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 Vc3S01_0479 973052c0a27ef00649cb88142b4f511e 316 TIGRFAM TIGR01380 glut_syn: glutathione synthase 2 311 7.7E-141 T 12-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 Vc3S01_0479 973052c0a27ef00649cb88142b4f511e 316 SUPERFAMILY SSF56059 123 313 5.41E-59 T 12-10-2018 Vc3S01_0479 973052c0a27ef00649cb88142b4f511e 316 Gene3D G3DSA:3.40.50.20 1 129 5.4E-53 T 12-10-2018 Vc3S01_0479 973052c0a27ef00649cb88142b4f511e 316 Gene3D G3DSA:3.30.1490.20 137 196 1.8E-29 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Vc3S01_0479 973052c0a27ef00649cb88142b4f511e 316 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 124 296 1.3E-80 T 12-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 Vc3S01_0479 973052c0a27ef00649cb88142b4f511e 316 SUPERFAMILY SSF52440 2 122 1.09E-46 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Vc3S01_0479 973052c0a27ef00649cb88142b4f511e 316 Gene3D G3DSA:3.30.470.20 197 300 1.3E-40 T 12-10-2018 Vc3S01_0479 973052c0a27ef00649cb88142b4f511e 316 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 2 120 7.1E-49 T 12-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 Vc3S01_0321 40d5a5972f5dda2d766315ed31b3000e 172 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 12-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 Vc3S01_0321 40d5a5972f5dda2d766315ed31b3000e 172 SUPERFAMILY SSF52540 4 169 2.5E-32 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0321 40d5a5972f5dda2d766315ed31b3000e 172 Gene3D G3DSA:3.40.50.300 1 172 1.9E-57 T 12-10-2018 Vc3S01_0321 40d5a5972f5dda2d766315ed31b3000e 172 Pfam PF01202 Shikimate kinase 13 169 1.6E-57 T 12-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 Vc3S01_0321 40d5a5972f5dda2d766315ed31b3000e 172 PRINTS PR01100 Shikimate kinase family signature 7 22 3.3E-29 T 12-10-2018 Vc3S01_0321 40d5a5972f5dda2d766315ed31b3000e 172 PRINTS PR01100 Shikimate kinase family signature 98 115 3.3E-29 T 12-10-2018 Vc3S01_0321 40d5a5972f5dda2d766315ed31b3000e 172 PRINTS PR01100 Shikimate kinase family signature 77 86 3.3E-29 T 12-10-2018 Vc3S01_0321 40d5a5972f5dda2d766315ed31b3000e 172 PRINTS PR01100 Shikimate kinase family signature 31 44 3.3E-29 T 12-10-2018 Vc3S01_0321 40d5a5972f5dda2d766315ed31b3000e 172 PRINTS PR01100 Shikimate kinase family signature 59 67 3.3E-29 T 12-10-2018 Vc3S01_0321 40d5a5972f5dda2d766315ed31b3000e 172 Hamap MF_00109 Shikimate kinase [aroK]. 4 170 29.822 T 12-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 Vc3S01_0786 62fbf69ec0db41dbb1228f3ac44ccb8d 401 Gene3D G3DSA:1.10.1740.10 312 400 1.3E-27 T 12-10-2018 Vc3S01_0786 62fbf69ec0db41dbb1228f3ac44ccb8d 401 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 239 2.3E-37 T 12-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Vc3S01_0786 62fbf69ec0db41dbb1228f3ac44ccb8d 401 SUPERFAMILY SSF51735 2 150 5.37E-46 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_0786 62fbf69ec0db41dbb1228f3ac44ccb8d 401 Pfam PF13288 DXP reductoisomerase C-terminal domain 271 391 3.2E-39 T 12-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Vc3S01_0786 62fbf69ec0db41dbb1228f3ac44ccb8d 401 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 396 45.537 T 12-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Vc3S01_0786 62fbf69ec0db41dbb1228f3ac44ccb8d 401 Gene3D G3DSA:3.40.50.720 1 150 1.7E-51 T 12-10-2018 Vc3S01_0786 62fbf69ec0db41dbb1228f3ac44ccb8d 401 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 2.0E-44 T 12-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Vc3S01_0786 62fbf69ec0db41dbb1228f3ac44ccb8d 401 SUPERFAMILY SSF55347 126 274 2.32E-62 T 12-10-2018 Vc3S01_0786 62fbf69ec0db41dbb1228f3ac44ccb8d 401 PIRSF PIRSF006205 1 401 3.9E-151 T 12-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Vc3S01_0786 62fbf69ec0db41dbb1228f3ac44ccb8d 401 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 2 395 1.8E-159 T 12-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Vc3S01_0786 62fbf69ec0db41dbb1228f3ac44ccb8d 401 SUPERFAMILY SSF69055 302 398 7.72E-30 T 12-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Vc3S01_0862 a900cb165635dff363cab124617ec2f2 136 Gene3D G3DSA:2.30.330.10 44 136 3.8E-34 T 12-10-2018 IPR036429 SpoA-like superfamily Vc3S01_0862 a900cb165635dff363cab124617ec2f2 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 73 89 5.6E-28 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Vc3S01_0862 a900cb165635dff363cab124617ec2f2 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 89 102 5.6E-28 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Vc3S01_0862 a900cb165635dff363cab124617ec2f2 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 102 117 5.6E-28 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Vc3S01_0862 a900cb165635dff363cab124617ec2f2 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 56 72 5.6E-28 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Vc3S01_0862 a900cb165635dff363cab124617ec2f2 136 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 54 128 1.5E-33 T 12-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 Vc3S01_0862 a900cb165635dff363cab124617ec2f2 136 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 56 126 6.6E-25 T 12-10-2018 IPR001543 Surface presentation of antigen (SpoA) Vc3S01_0862 a900cb165635dff363cab124617ec2f2 136 SUPERFAMILY SSF101801 54 134 7.32E-25 T 12-10-2018 IPR036429 SpoA-like superfamily Vc3S01_A1409 153bbf302e554efab444ec09a2d18629 218 SUPERFAMILY SSF55469 6 216 5.89E-56 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Vc3S01_A1409 153bbf302e554efab444ec09a2d18629 218 Gene3D G3DSA:3.40.109.10 1 217 1.1E-50 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Vc3S01_A1409 153bbf302e554efab444ec09a2d18629 218 Pfam PF00881 Nitroreductase family 10 193 2.8E-20 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Vc3S01_2644 3121e03b50d14d172dc55e8f1b7f40c3 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 1.0E-56 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Vc3S01_2644 3121e03b50d14d172dc55e8f1b7f40c3 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 1.0E-56 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Vc3S01_2644 3121e03b50d14d172dc55e8f1b7f40c3 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 1.0E-56 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Vc3S01_2644 3121e03b50d14d172dc55e8f1b7f40c3 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 177 198 1.0E-56 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Vc3S01_2644 3121e03b50d14d172dc55e8f1b7f40c3 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 1.0E-56 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Vc3S01_2644 3121e03b50d14d172dc55e8f1b7f40c3 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 1.0E-56 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Vc3S01_2644 3121e03b50d14d172dc55e8f1b7f40c3 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 104 123 1.1E-35 T 12-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 Vc3S01_2644 3121e03b50d14d172dc55e8f1b7f40c3 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 198 210 1.1E-35 T 12-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 Vc3S01_2644 3121e03b50d14d172dc55e8f1b7f40c3 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 156 182 1.1E-35 T 12-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 Vc3S01_2644 3121e03b50d14d172dc55e8f1b7f40c3 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 1.1E-35 T 12-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 Vc3S01_2644 3121e03b50d14d172dc55e8f1b7f40c3 267 Gene3D G3DSA:3.40.190.80 142 266 1.0E-35 T 12-10-2018 Vc3S01_2644 3121e03b50d14d172dc55e8f1b7f40c3 267 Gene3D G3DSA:3.30.540.10 1 140 2.7E-48 T 12-10-2018 Vc3S01_2644 3121e03b50d14d172dc55e8f1b7f40c3 267 Pfam PF00459 Inositol monophosphatase family 2 259 3.1E-64 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Vc3S01_2644 3121e03b50d14d172dc55e8f1b7f40c3 267 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 12-10-2018 IPR020583 Inositol monophosphatase, metal-binding site Vc3S01_2644 3121e03b50d14d172dc55e8f1b7f40c3 267 SUPERFAMILY SSF56655 1 259 3.14E-79 T 12-10-2018 Vc3S01_2515 0e81400a5ba422ce2d7c660574c03dc6 154 SUPERFAMILY SSF55486 3 150 5.37E-50 T 12-10-2018 Vc3S01_2515 0e81400a5ba422ce2d7c660574c03dc6 154 Gene3D G3DSA:3.40.390.30 1 154 2.8E-60 T 12-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 Vc3S01_2515 0e81400a5ba422ce2d7c660574c03dc6 154 Pfam PF02130 Uncharacterized protein family UPF0054 20 142 1.9E-38 T 12-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 Vc3S01_2515 0e81400a5ba422ce2d7c660574c03dc6 154 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 113 123 - T 12-10-2018 IPR020549 Endoribonuclease YbeY, conserved site Vc3S01_2515 0e81400a5ba422ce2d7c660574c03dc6 154 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 4 147 24.723 T 12-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 Vc3S01_2515 0e81400a5ba422ce2d7c660574c03dc6 154 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 39 143 3.7E-38 T 12-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 Vc3S01_A0577 c21c27b17a2519d160f7daea1defb97e 186 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 6 157 1.3E-22 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Vc3S01_A0577 c21c27b17a2519d160f7daea1defb97e 186 TIGRFAM TIGR02959 SigZ: RNA polymerase sigma factor, SigZ family 10 179 9.3E-57 T 12-10-2018 IPR014304 RNA polymerase sigma-Z type Vc3S01_A0577 c21c27b17a2519d160f7daea1defb97e 186 SUPERFAMILY SSF88946 6 91 7.85E-19 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Vc3S01_A0577 c21c27b17a2519d160f7daea1defb97e 186 Gene3D G3DSA:1.10.1740.10 1 75 1.1E-16 T 12-10-2018 Vc3S01_A0577 c21c27b17a2519d160f7daea1defb97e 186 Pfam PF04542 Sigma-70 region 2 11 76 6.4E-13 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Vc3S01_A0577 c21c27b17a2519d160f7daea1defb97e 186 Gene3D G3DSA:1.10.10.10 76 162 3.4E-10 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A0577 c21c27b17a2519d160f7daea1defb97e 186 Pfam PF08281 Sigma-70, region 4 109 155 1.5E-9 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Vc3S01_A0577 c21c27b17a2519d160f7daea1defb97e 186 SUPERFAMILY SSF88659 97 160 5.98E-10 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Vc3S01_0940 6629b0f87dbc374095b8b969f7f11c9b 131 SUPERFAMILY SSF54593 2 126 8.8E-29 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Vc3S01_0940 6629b0f87dbc374095b8b969f7f11c9b 131 Gene3D G3DSA:3.10.180.10 1 128 2.4E-34 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Vc3S01_0940 6629b0f87dbc374095b8b969f7f11c9b 131 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 123 1.3E-17 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Vc3S01_1838 c962a9bdf3bb2a0949098b40b035ead4 331 Pfam PF01032 FecCD transport family 25 326 2.6E-80 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Vc3S01_1838 c962a9bdf3bb2a0949098b40b035ead4 331 Gene3D G3DSA:1.10.3470.10 5 328 3.0E-93 T 12-10-2018 IPR037294 ABC transporter, BtuC-like Vc3S01_1838 c962a9bdf3bb2a0949098b40b035ead4 331 Hamap MF_01004 Vitamin B12 import system permease protein BtuC [btuC]. 3 329 30.686 T 12-10-2018 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC GO:0015889|GO:0016020 Vc3S01_1838 c962a9bdf3bb2a0949098b40b035ead4 331 SUPERFAMILY SSF81345 7 326 3.66E-79 T 12-10-2018 IPR037294 ABC transporter, BtuC-like Vc3S01_A1595 323cc45b3dbae415370075b75975f128 282 SUPERFAMILY SSF51182 5 280 4.08E-73 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily Vc3S01_A1595 323cc45b3dbae415370075b75975f128 282 Pfam PF05726 Pirin C-terminal cupin domain 181 279 2.9E-29 T 12-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 Vc3S01_A1595 323cc45b3dbae415370075b75975f128 282 Gene3D G3DSA:2.60.120.10 18 275 1.4E-86 T 12-10-2018 IPR014710 RmlC-like jelly roll fold Vc3S01_A1595 323cc45b3dbae415370075b75975f128 282 PIRSF PIRSF006232 3 282 2.1E-85 T 12-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 Vc3S01_A1595 323cc45b3dbae415370075b75975f128 282 Gene3D G3DSA:2.60.120.10 143 249 1.4E-86 T 12-10-2018 IPR014710 RmlC-like jelly roll fold Vc3S01_A1595 323cc45b3dbae415370075b75975f128 282 Pfam PF02678 Pirin 24 121 5.6E-32 T 12-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 Vc3S01_1712 249170521dcfa5d10f2a2be785a9f038 322 Gene3D G3DSA:3.40.50.2300 1 120 6.4E-29 T 12-10-2018 Vc3S01_1712 249170521dcfa5d10f2a2be785a9f038 322 SUPERFAMILY SSF52172 1 116 1.57E-28 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_1712 249170521dcfa5d10f2a2be785a9f038 322 Gene3D G3DSA:3.40.1550.10 139 320 1.0E-22 T 12-10-2018 IPR028976 CheC-like superfamily Vc3S01_1712 249170521dcfa5d10f2a2be785a9f038 322 SMART SM00448 1 113 2.8E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_1712 249170521dcfa5d10f2a2be785a9f038 322 Pfam PF00072 Response regulator receiver domain 3 110 3.5E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_1712 249170521dcfa5d10f2a2be785a9f038 322 SUPERFAMILY SSF103039 141 320 2.88E-30 T 12-10-2018 IPR028976 CheC-like superfamily Vc3S01_0323 d57323bc0ca7c5944c5fd9d1bb70997d 497 Pfam PF05036 Sporulation related domain 410 483 1.4E-7 T 12-10-2018 IPR007730 Sporulation-like domain GO:0042834 Vc3S01_0323 d57323bc0ca7c5944c5fd9d1bb70997d 497 Gene3D G3DSA:3.40.50.300 9 162 1.0E-6 T 12-10-2018 Vc3S01_0323 d57323bc0ca7c5944c5fd9d1bb70997d 497 Gene3D G3DSA:3.30.70.1070 398 494 1.3E-24 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Vc3S01_0323 d57323bc0ca7c5944c5fd9d1bb70997d 497 SUPERFAMILY SSF52540 13 221 7.83E-10 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0323 d57323bc0ca7c5944c5fd9d1bb70997d 497 Pfam PF13401 AAA domain 27 146 6.1E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_2826 93808fbae3a5dd3ffc6d9120611d621f 353 ProSitePatterns PS01016 Glycoprotease family signature. 111 131 - T 12-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 Vc3S01_2826 93808fbae3a5dd3ffc6d9120611d621f 353 SUPERFAMILY SSF53067 18 138 7.34E-31 T 12-10-2018 Vc3S01_2826 93808fbae3a5dd3ffc6d9120611d621f 353 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 18 328 1.4E-133 T 12-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 Vc3S01_2826 93808fbae3a5dd3ffc6d9120611d621f 353 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 16 346 63.429 T 12-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 Vc3S01_2826 93808fbae3a5dd3ffc6d9120611d621f 353 SUPERFAMILY SSF53067 116 324 6.91E-43 T 12-10-2018 Vc3S01_2826 93808fbae3a5dd3ffc6d9120611d621f 353 Pfam PF00814 Glycoprotease family 39 322 2.5E-102 T 12-10-2018 IPR000905 Gcp-like domain Vc3S01_2826 93808fbae3a5dd3ffc6d9120611d621f 353 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 146 158 8.8E-50 T 12-10-2018 IPR017861 Kae1/TsaD family Vc3S01_2826 93808fbae3a5dd3ffc6d9120611d621f 353 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 19 32 8.8E-50 T 12-10-2018 IPR017861 Kae1/TsaD family Vc3S01_2826 93808fbae3a5dd3ffc6d9120611d621f 353 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 91 111 8.8E-50 T 12-10-2018 IPR017861 Kae1/TsaD family Vc3S01_2826 93808fbae3a5dd3ffc6d9120611d621f 353 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 278 287 8.8E-50 T 12-10-2018 IPR017861 Kae1/TsaD family Vc3S01_2826 93808fbae3a5dd3ffc6d9120611d621f 353 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 169 190 8.8E-50 T 12-10-2018 IPR017861 Kae1/TsaD family Vc3S01_2826 93808fbae3a5dd3ffc6d9120611d621f 353 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 112 131 8.8E-50 T 12-10-2018 IPR017861 Kae1/TsaD family Vc3S01_2826 93808fbae3a5dd3ffc6d9120611d621f 353 Gene3D G3DSA:3.30.420.40 144 308 1.5E-130 T 12-10-2018 Vc3S01_2826 93808fbae3a5dd3ffc6d9120611d621f 353 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 20 321 1.7E-122 T 12-10-2018 IPR017861 Kae1/TsaD family Vc3S01_2826 93808fbae3a5dd3ffc6d9120611d621f 353 Gene3D G3DSA:3.30.420.40 18 330 1.5E-130 T 12-10-2018 Vc3S01_A0935 115915b25c7b0d7db8e9ffb705c456a2 401 SUPERFAMILY SSF53649 1 399 3.11E-115 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Vc3S01_A0935 115915b25c7b0d7db8e9ffb705c456a2 401 PRINTS PR00113 Alkaline phosphatase signature 49 64 9.2E-31 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 Vc3S01_A0935 115915b25c7b0d7db8e9ffb705c456a2 401 PRINTS PR00113 Alkaline phosphatase signature 136 146 9.2E-31 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 Vc3S01_A0935 115915b25c7b0d7db8e9ffb705c456a2 401 PRINTS PR00113 Alkaline phosphatase signature 86 106 9.2E-31 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 Vc3S01_A0935 115915b25c7b0d7db8e9ffb705c456a2 401 PRINTS PR00113 Alkaline phosphatase signature 200 229 9.2E-31 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 Vc3S01_A0935 115915b25c7b0d7db8e9ffb705c456a2 401 SMART SM00098 1 401 1.5E-104 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 Vc3S01_A0935 115915b25c7b0d7db8e9ffb705c456a2 401 Gene3D G3DSA:1.10.60.40 276 362 1.4E-143 T 12-10-2018 Vc3S01_A0935 115915b25c7b0d7db8e9ffb705c456a2 401 Gene3D G3DSA:3.40.720.10 1 393 1.4E-143 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Vc3S01_A0935 115915b25c7b0d7db8e9ffb705c456a2 401 ProSitePatterns PS00123 Alkaline phosphatase active site. 49 57 - T 12-10-2018 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 Vc3S01_A0935 115915b25c7b0d7db8e9ffb705c456a2 401 Pfam PF00245 Alkaline phosphatase 1 399 7.4E-105 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 Vc3S01_1726 c64af09f23e0df866ee0ebb57c733204 394 Pfam PF00534 Glycosyl transferases group 1 184 347 6.0E-29 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 Vc3S01_1726 c64af09f23e0df866ee0ebb57c733204 394 Pfam PF13439 Glycosyltransferase Family 4 18 174 5.4E-15 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Vc3S01_1726 c64af09f23e0df866ee0ebb57c733204 394 Gene3D G3DSA:3.40.50.2000 181 352 7.9E-40 T 12-10-2018 Vc3S01_1726 c64af09f23e0df866ee0ebb57c733204 394 Gene3D G3DSA:3.40.50.2000 4 180 1.5E-16 T 12-10-2018 Vc3S01_1726 c64af09f23e0df866ee0ebb57c733204 394 SUPERFAMILY SSF53756 7 372 2.59E-67 T 12-10-2018 Vc3S01_2512 05fe116a00adddb13d25c4a2478adf8a 391 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 390 6.6E-109 T 12-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 Vc3S01_2512 05fe116a00adddb13d25c4a2478adf8a 391 Pfam PF01494 FAD binding domain 4 340 1.1E-26 T 12-10-2018 IPR002938 FAD-binding domain GO:0071949 Vc3S01_2512 05fe116a00adddb13d25c4a2478adf8a 391 SUPERFAMILY SSF51905 3 383 9.98E-56 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_2512 05fe116a00adddb13d25c4a2478adf8a 391 Gene3D G3DSA:3.30.9.50 80 274 1.1E-97 T 12-10-2018 Vc3S01_2512 05fe116a00adddb13d25c4a2478adf8a 391 Gene3D G3DSA:3.50.50.60 5 338 1.1E-97 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_2512 05fe116a00adddb13d25c4a2478adf8a 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 1.2E-17 T 12-10-2018 Vc3S01_2512 05fe116a00adddb13d25c4a2478adf8a 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 300 316 1.2E-17 T 12-10-2018 Vc3S01_2512 05fe116a00adddb13d25c4a2478adf8a 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 285 300 1.2E-17 T 12-10-2018 Vc3S01_2512 05fe116a00adddb13d25c4a2478adf8a 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 1.2E-17 T 12-10-2018 Vc3S01_2448 3367d96a117b374471a4b2a5a7f40d03 153 SUPERFAMILY SSF141322 113 151 1.2E-5 T 12-10-2018 Vc3S01_2448 3367d96a117b374471a4b2a5a7f40d03 153 Pfam PF01957 NfeD-like C-terminal, partner-binding 14 151 3.7E-26 T 12-10-2018 IPR002810 NfeD-like, C-terminal domain Vc3S01_2448 3367d96a117b374471a4b2a5a7f40d03 153 Gene3D G3DSA:2.40.50.140 82 153 1.1E-9 T 12-10-2018 Vc3S01_0804 5302162037c47de21d96d260eaa8cdc4 251 Pfam PF08241 Methyltransferase domain 70 125 9.8E-10 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Vc3S01_0804 5302162037c47de21d96d260eaa8cdc4 251 Gene3D G3DSA:3.40.50.150 57 179 7.6E-15 T 12-10-2018 Vc3S01_0804 5302162037c47de21d96d260eaa8cdc4 251 SUPERFAMILY SSF53335 73 212 1.24E-20 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Vc3S01_3118 9c2f228bb0577272cacedb85cac59b66 232 Pfam PF13417 Glutathione S-transferase, N-terminal domain 5 76 3.5E-21 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Vc3S01_3118 9c2f228bb0577272cacedb85cac59b66 232 Gene3D G3DSA:3.40.30.10 1 86 1.7E-28 T 12-10-2018 Vc3S01_3118 9c2f228bb0577272cacedb85cac59b66 232 SUPERFAMILY SSF47616 85 197 1.0E-18 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Vc3S01_3118 9c2f228bb0577272cacedb85cac59b66 232 SUPERFAMILY SSF52833 1 100 3.9E-23 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Vc3S01_3118 9c2f228bb0577272cacedb85cac59b66 232 Pfam PF00043 Glutathione S-transferase, C-terminal domain 100 187 1.1E-6 T 12-10-2018 IPR004046 Glutathione S-transferase, C-terminal Vc3S01_3118 9c2f228bb0577272cacedb85cac59b66 232 Gene3D G3DSA:1.20.1050.10 87 207 6.9E-15 T 12-10-2018 Vc3S01_0734 e3e830934ca83aa45e20a904be506958 403 Gene3D G3DSA:3.90.1150.10 7 395 1.1E-162 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Vc3S01_0734 e3e830934ca83aa45e20a904be506958 403 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 216 235 - T 12-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site Vc3S01_0734 e3e830934ca83aa45e20a904be506958 403 PIRSF PIRSF005572 21 403 1.7E-53 T 12-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 Vc3S01_0734 e3e830934ca83aa45e20a904be506958 403 Pfam PF00266 Aminotransferase class-V 24 392 2.3E-148 T 12-10-2018 IPR000192 Aminotransferase class V domain Vc3S01_0734 e3e830934ca83aa45e20a904be506958 403 Gene3D G3DSA:3.40.640.10 35 295 1.1E-162 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Vc3S01_0734 e3e830934ca83aa45e20a904be506958 403 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 6 401 2.3E-167 T 12-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 Vc3S01_0734 e3e830934ca83aa45e20a904be506958 403 SUPERFAMILY SSF53383 2 400 4.76E-123 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Vc3S01_0734 e3e830934ca83aa45e20a904be506958 403 TIGRFAM TIGR03392 FeS_syn_CsdA: cysteine desulfurase, catalytic subunit CsdA 2 403 4.9E-154 T 12-10-2018 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA GO:0016226|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 Vc3S01_A0499 d25b74a6ba737671265ca356d7028415 435 Pfam PF00375 Sodium:dicarboxylate symporter family 40 416 1.4E-87 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Vc3S01_A0499 d25b74a6ba737671265ca356d7028415 435 PRINTS PR00173 Glutamate-aspartate symporter signature 59 79 9.8E-44 T 12-10-2018 Vc3S01_A0499 d25b74a6ba737671265ca356d7028415 435 PRINTS PR00173 Glutamate-aspartate symporter signature 241 260 9.8E-44 T 12-10-2018 Vc3S01_A0499 d25b74a6ba737671265ca356d7028415 435 PRINTS PR00173 Glutamate-aspartate symporter signature 370 390 9.8E-44 T 12-10-2018 Vc3S01_A0499 d25b74a6ba737671265ca356d7028415 435 PRINTS PR00173 Glutamate-aspartate symporter signature 159 181 9.8E-44 T 12-10-2018 Vc3S01_A0499 d25b74a6ba737671265ca356d7028415 435 PRINTS PR00173 Glutamate-aspartate symporter signature 308 334 9.8E-44 T 12-10-2018 Vc3S01_A0499 d25b74a6ba737671265ca356d7028415 435 PRINTS PR00173 Glutamate-aspartate symporter signature 343 362 9.8E-44 T 12-10-2018 Vc3S01_A0499 d25b74a6ba737671265ca356d7028415 435 PRINTS PR00173 Glutamate-aspartate symporter signature 89 114 9.8E-44 T 12-10-2018 Vc3S01_A0499 d25b74a6ba737671265ca356d7028415 435 SUPERFAMILY SSF118215 32 416 1.31E-84 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 Vc3S01_A0499 d25b74a6ba737671265ca356d7028415 435 Gene3D G3DSA:1.10.3860.10 2 431 8.8E-95 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 Vc3S01_1647 87391b238a75e534768be2fc9d46c805 404 Pfam PF08668 HDOD domain 140 272 1.9E-8 T 12-10-2018 IPR013976 Metal-dependent hydrolase HDOD Vc3S01_1647 87391b238a75e534768be2fc9d46c805 404 Gene3D G3DSA:1.10.3210.10 130 371 7.0E-11 T 12-10-2018 Vc3S01_1647 87391b238a75e534768be2fc9d46c805 404 SUPERFAMILY SSF109604 135 276 5.65E-10 T 12-10-2018 Vc3S01_A0101 db8ab576ca656c727d0b92e6c38a9e18 259 SUPERFAMILY SSF53850 87 224 4.48E-13 T 12-10-2018 Vc3S01_A0101 db8ab576ca656c727d0b92e6c38a9e18 259 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 88 221 3.9E-6 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Vc3S01_A1818 5db0da2fc04736ae090e1de0059ef677 228 Gene3D G3DSA:1.10.287.70 123 227 3.7E-21 T 12-10-2018 Vc3S01_A1818 5db0da2fc04736ae090e1de0059ef677 228 Pfam PF07885 Ion channel 134 217 9.9E-18 T 12-10-2018 IPR013099 Potassium channel domain Vc3S01_A1818 5db0da2fc04736ae090e1de0059ef677 228 SUPERFAMILY SSF81324 125 220 8.37E-19 T 12-10-2018 Vc3S01_A1818 5db0da2fc04736ae090e1de0059ef677 228 PRINTS PR00169 Potassium channel signature 193 219 7.5E-6 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 Vc3S01_A1818 5db0da2fc04736ae090e1de0059ef677 228 PRINTS PR00169 Potassium channel signature 126 149 7.5E-6 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 Vc3S01_A1818 5db0da2fc04736ae090e1de0059ef677 228 PRINTS PR00169 Potassium channel signature 164 186 7.5E-6 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 Vc3S01_p40022 9e6b583634e8729c894049a633e18176 173 Gene3D G3DSA:2.40.160.10 16 173 5.8E-7 T 12-10-2018 IPR023614 Porin domain superfamily Vc3S01_p40022 9e6b583634e8729c894049a633e18176 173 Pfam PF13505 Outer membrane protein beta-barrel domain 8 173 1.8E-10 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel Vc3S01_p40022 9e6b583634e8729c894049a633e18176 173 SUPERFAMILY SSF56925 35 173 7.32E-12 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel Vc3S01_2211 2cb65178d9486e96114d759ce6c21f10 342 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 31 212 2.9E-34 T 12-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal Vc3S01_2211 2cb65178d9486e96114d759ce6c21f10 342 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 306 321 3.9E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Vc3S01_2211 2cb65178d9486e96114d759ce6c21f10 342 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 321 337 3.9E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Vc3S01_2211 2cb65178d9486e96114d759ce6c21f10 342 SMART SM00342 255 337 1.3E-23 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_2211 2cb65178d9486e96114d759ce6c21f10 342 SUPERFAMILY SSF46689 290 340 2.33E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_2211 2cb65178d9486e96114d759ce6c21f10 342 Gene3D G3DSA:1.10.10.60 239 341 1.0E-23 T 12-10-2018 Vc3S01_2211 2cb65178d9486e96114d759ce6c21f10 342 Pfam PF12833 Helix-turn-helix domain 261 339 5.6E-19 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_2783 acea1199744f47e3c04458b1d50754a2 601 Pfam PF03717 Penicillin-binding Protein dimerisation domain 95 249 1.1E-19 T 12-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 Vc3S01_2783 acea1199744f47e3c04458b1d50754a2 601 Gene3D G3DSA:3.40.710.10 324 506 4.9E-105 T 12-10-2018 Vc3S01_2783 acea1199744f47e3c04458b1d50754a2 601 Hamap MF_02080 Peptidoglycan D,D-transpeptidase FtsI [ftsI]. 47 599 45.029 T 12-10-2018 IPR037532 Peptidoglycan D,D-transpeptidase FtsI GO:0005887|GO:0008658|GO:0008955|GO:0009252|GO:0051301 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Vc3S01_2783 acea1199744f47e3c04458b1d50754a2 601 SUPERFAMILY SSF56519 91 262 3.66E-45 T 12-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 Vc3S01_2783 acea1199744f47e3c04458b1d50754a2 601 SUPERFAMILY SSF56601 263 592 9.82E-92 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Vc3S01_2783 acea1199744f47e3c04458b1d50754a2 601 Gene3D G3DSA:3.90.1310.30 87 262 4.7E-45 T 12-10-2018 Vc3S01_2783 acea1199744f47e3c04458b1d50754a2 601 Gene3D G3DSA:3.30.450.330 264 588 4.9E-105 T 12-10-2018 Vc3S01_2783 acea1199744f47e3c04458b1d50754a2 601 Pfam PF00905 Penicillin binding protein transpeptidase domain 288 584 7.7E-77 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Vc3S01_2539 fb2e6f18bf3702f5a6f0140ad78a7484 344 SUPERFAMILY SSF52540 1 238 1.35E-82 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2539 fb2e6f18bf3702f5a6f0140ad78a7484 344 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_2539 fb2e6f18bf3702f5a6f0140ad78a7484 344 Pfam PF00005 ABC transporter 21 169 1.3E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_2539 fb2e6f18bf3702f5a6f0140ad78a7484 344 Gene3D G3DSA:3.40.50.300 1 232 3.1E-74 T 12-10-2018 Vc3S01_2539 fb2e6f18bf3702f5a6f0140ad78a7484 344 Pfam PF09383 NIL domain 268 339 2.5E-21 T 12-10-2018 IPR018449 NIL domain Vc3S01_2539 fb2e6f18bf3702f5a6f0140ad78a7484 344 TIGRFAM TIGR02314 ABC_MetN: D-methionine ABC transporter, ATP-binding protein 1 343 4.3E-195 T 12-10-2018 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria GO:0005524|GO:0009276|GO:0048473|GO:0048474 Vc3S01_2539 fb2e6f18bf3702f5a6f0140ad78a7484 344 SUPERFAMILY SSF55021 248 343 2.63E-26 T 12-10-2018 Vc3S01_2539 fb2e6f18bf3702f5a6f0140ad78a7484 344 Gene3D G3DSA:3.30.70.260 244 344 1.4E-40 T 12-10-2018 Vc3S01_2539 fb2e6f18bf3702f5a6f0140ad78a7484 344 SMART SM00930 265 340 1.2E-28 T 12-10-2018 IPR018449 NIL domain Vc3S01_2539 fb2e6f18bf3702f5a6f0140ad78a7484 344 SMART SM00382 30 235 1.9E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_1736 af75757755a171b2e941e106ac4f04ef 1466 Pfam PF13402 Peptidase M60, enhancin and enhancin-like 1141 1419 4.2E-37 T 12-10-2018 IPR031161 Peptidase family M60 domain Vc3S01_1736 af75757755a171b2e941e106ac4f04ef 1466 Gene3D G3DSA:1.10.390.30 1267 1433 3.2E-11 T 12-10-2018 Vc3S01_1736 af75757755a171b2e941e106ac4f04ef 1466 SMART SM01276 1041 1339 1.0E-74 T 12-10-2018 IPR031161 Peptidase family M60 domain Vc3S01_1736 af75757755a171b2e941e106ac4f04ef 1466 Pfam PF13322 Domain of unknown function (DUF4092) 405 541 3.2E-31 T 12-10-2018 IPR025385 Domain of unknown function DUF4092 Vc3S01_1736 af75757755a171b2e941e106ac4f04ef 1466 Pfam PF17291 N-terminal domain of M60-like peptidases 1033 1122 5.7E-13 T 12-10-2018 IPR035423 M60-like domain, N-terminal Vc3S01_1307 fdc0f399496b846453d2d2556a60a935 322 Pfam PF11185 Protein of unknown function (DUF2971) 78 170 1.2E-10 T 12-10-2018 IPR021352 Protein of unknown function DUF2971 Vc3S01_A1922 9c4e69a5aae1950dbd8d63e37d52c48a 337 Gene3D G3DSA:2.40.50.100 38 168 2.6E-11 T 12-10-2018 Vc3S01_A1922 9c4e69a5aae1950dbd8d63e37d52c48a 337 Gene3D G3DSA:2.40.30.170 220 336 6.5E-36 T 12-10-2018 Vc3S01_A1922 9c4e69a5aae1950dbd8d63e37d52c48a 337 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 36 282 4.5E-20 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Vc3S01_A1922 9c4e69a5aae1950dbd8d63e37d52c48a 337 SUPERFAMILY SSF111369 112 277 5.62E-9 T 12-10-2018 Vc3S01_A1922 9c4e69a5aae1950dbd8d63e37d52c48a 337 Pfam PF00529 HlyD membrane-fusion protein of T1SS 283 332 8.9E-9 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Vc3S01_A1922 9c4e69a5aae1950dbd8d63e37d52c48a 337 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 321 336 4.4E-5 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Vc3S01_A1922 9c4e69a5aae1950dbd8d63e37d52c48a 337 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 50 70 4.4E-5 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Vc3S01_A1922 9c4e69a5aae1950dbd8d63e37d52c48a 337 Gene3D G3DSA:1.10.287.470 73 167 2.6E-11 T 12-10-2018 Vc3S01_A1922 9c4e69a5aae1950dbd8d63e37d52c48a 337 SUPERFAMILY SSF111369 38 108 1.57E-7 T 12-10-2018 Vc3S01_2237 3bde5fd96560668d43102f2bce618ad2 234 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 94 108 - T 12-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 Vc3S01_2237 3bde5fd96560668d43102f2bce618ad2 234 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 63 233 3.3E-59 T 12-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 Vc3S01_2237 3bde5fd96560668d43102f2bce618ad2 234 Pfam PF00849 RNA pseudouridylate synthase 59 203 7.8E-17 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Vc3S01_2237 3bde5fd96560668d43102f2bce618ad2 234 Gene3D G3DSA:3.30.70.580 25 122 2.6E-26 T 12-10-2018 Vc3S01_2237 3bde5fd96560668d43102f2bce618ad2 234 Gene3D G3DSA:3.30.70.1560 123 222 2.1E-40 T 12-10-2018 Vc3S01_2237 3bde5fd96560668d43102f2bce618ad2 234 SUPERFAMILY SSF55120 50 233 8.32E-48 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Vc3S01_2711 620a0885ed3801157e9992485542a19e 86 SUPERFAMILY SSF46992 3 86 1.83E-32 T 12-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_2711 620a0885ed3801157e9992485542a19e 86 Gene3D G3DSA:1.20.58.110 1 86 4.4E-30 T 12-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_2711 620a0885ed3801157e9992485542a19e 86 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 86 7.0E-23 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_2711 620a0885ed3801157e9992485542a19e 86 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.687 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_2711 620a0885ed3801157e9992485542a19e 86 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 85 9.4E-32 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_2711 620a0885ed3801157e9992485542a19e 86 Pfam PF01649 Ribosomal protein S20 2 84 1.0E-27 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_1708 585ef185bb79e23f367972b648fad05d 672 SUPERFAMILY SSF58104 368 668 6.54E-58 T 12-10-2018 Vc3S01_1708 585ef185bb79e23f367972b648fad05d 672 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 314 334 6.2E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Vc3S01_1708 585ef185bb79e23f367972b648fad05d 672 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 198 213 6.2E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Vc3S01_1708 585ef185bb79e23f367972b648fad05d 672 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 504 531 6.2E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Vc3S01_1708 585ef185bb79e23f367972b648fad05d 672 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 533 562 6.2E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Vc3S01_1708 585ef185bb79e23f367972b648fad05d 672 SMART SM00283 405 667 9.4E-41 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Vc3S01_1708 585ef185bb79e23f367972b648fad05d 672 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 484 633 8.4E-39 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Vc3S01_1708 585ef185bb79e23f367972b648fad05d 672 Gene3D G3DSA:1.10.287.950 339 668 7.1E-58 T 12-10-2018 Vc3S01_A1084 0c44d611c5dd548d80273d2fedf935af 279 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 152 253 2.5E-15 T 12-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 Vc3S01_A1084 0c44d611c5dd548d80273d2fedf935af 279 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 11 96 2.0E-9 T 12-10-2018 IPR026992 Non-haem dioxygenase N-terminal domain Vc3S01_A1084 0c44d611c5dd548d80273d2fedf935af 279 Gene3D G3DSA:2.60.120.330 1 279 9.2E-96 T 12-10-2018 IPR027443 Isopenicillin N synthase-like Vc3S01_A1084 0c44d611c5dd548d80273d2fedf935af 279 SUPERFAMILY SSF51197 7 276 5.77E-61 T 12-10-2018 Vc3S01_1051 8d28471d80a453dd0799d608ec7189ee 329 Pfam PF04055 Radical SAM superfamily 19 181 5.3E-27 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Vc3S01_1051 8d28471d80a453dd0799d608ec7189ee 329 Pfam PF06463 Molybdenum Cofactor Synthesis C 186 312 3.0E-39 T 12-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Vc3S01_1051 8d28471d80a453dd0799d608ec7189ee 329 SUPERFAMILY SSF102114 6 289 5.76E-70 T 12-10-2018 Vc3S01_1051 8d28471d80a453dd0799d608ec7189ee 329 Pfam PF13353 4Fe-4S single cluster domain 23 125 1.7E-8 T 12-10-2018 Vc3S01_1051 8d28471d80a453dd0799d608ec7189ee 329 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 5 329 36.888 T 12-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Vc3S01_1051 8d28471d80a453dd0799d608ec7189ee 329 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 6 329 5.5E-105 T 12-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Vc3S01_1051 8d28471d80a453dd0799d608ec7189ee 329 SMART SM00729 14 219 5.3E-5 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Vc3S01_1051 8d28471d80a453dd0799d608ec7189ee 329 Gene3D G3DSA:3.20.20.70 2 329 1.0E-82 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_0413 0174201e24db3cacc4201ffd5fae6881 287 PIRSF PIRSF005052 1 286 3.7E-104 T 12-10-2018 IPR005337 RapZ-like family GO:0005524 Vc3S01_0413 0174201e24db3cacc4201ffd5fae6881 287 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 283 39.298 T 12-10-2018 IPR005337 RapZ-like family GO:0005524 Vc3S01_0413 0174201e24db3cacc4201ffd5fae6881 287 Pfam PF03668 P-loop ATPase protein family 1 284 4.5E-109 T 12-10-2018 IPR005337 RapZ-like family GO:0005524 Vc3S01_0413 0174201e24db3cacc4201ffd5fae6881 287 SUPERFAMILY SSF52540 2 151 4.79E-11 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A1155 41371f2d42d7650f2dcd6b2588bc048e 337 Pfam PF12833 Helix-turn-helix domain 252 327 1.0E-12 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_A1155 41371f2d42d7650f2dcd6b2588bc048e 337 Gene3D G3DSA:1.10.10.60 225 334 3.6E-19 T 12-10-2018 Vc3S01_A1155 41371f2d42d7650f2dcd6b2588bc048e 337 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 310 326 3.0E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Vc3S01_A1155 41371f2d42d7650f2dcd6b2588bc048e 337 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 295 310 3.0E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Vc3S01_A1155 41371f2d42d7650f2dcd6b2588bc048e 337 SMART SM00342 245 326 3.1E-15 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_A1155 41371f2d42d7650f2dcd6b2588bc048e 337 SUPERFAMILY SSF46689 287 329 3.99E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_1968 4b15c0c0d04db8d677d655583556eb31 233 Gene3D G3DSA:3.30.70.1560 127 210 5.0E-56 T 12-10-2018 Vc3S01_1968 4b15c0c0d04db8d677d655583556eb31 233 Pfam PF00849 RNA pseudouridylate synthase 61 193 1.6E-18 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Vc3S01_1968 4b15c0c0d04db8d677d655583556eb31 233 Gene3D G3DSA:3.10.290.10 1 61 7.3E-16 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Vc3S01_1968 4b15c0c0d04db8d677d655583556eb31 233 SUPERFAMILY SSF55120 60 228 1.6E-43 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Vc3S01_1968 4b15c0c0d04db8d677d655583556eb31 233 SMART SM00363 1 59 7.1E-10 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_1968 4b15c0c0d04db8d677d655583556eb31 233 Gene3D G3DSA:3.30.70.580 62 228 5.0E-56 T 12-10-2018 Vc3S01_1968 4b15c0c0d04db8d677d655583556eb31 233 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 98 112 - T 12-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 Vc3S01_1968 4b15c0c0d04db8d677d655583556eb31 233 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 65 225 3.9E-49 T 12-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 Vc3S01_1968 4b15c0c0d04db8d677d655583556eb31 233 SUPERFAMILY SSF55174 1 86 5.0E-13 T 12-10-2018 Vc3S01_1968 4b15c0c0d04db8d677d655583556eb31 233 Pfam PF01479 S4 domain 1 46 2.3E-10 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_A2046 615e9c9d4e66cd5f836c6d861bf6f819 541 SUPERFAMILY SSF53850 36 533 1.3E-139 T 12-10-2018 Vc3S01_A2046 615e9c9d4e66cd5f836c6d861bf6f819 541 Gene3D G3DSA:3.40.190.10 41 523 6.1E-180 T 12-10-2018 Vc3S01_A2046 615e9c9d4e66cd5f836c6d861bf6f819 541 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 82 462 9.7E-84 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain Vc3S01_A2046 615e9c9d4e66cd5f836c6d861bf6f819 541 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 87 108 - T 12-10-2018 IPR023765 Solute-binding protein family 5, conserved site Vc3S01_A2046 615e9c9d4e66cd5f836c6d861bf6f819 541 PIRSF PIRSF002741 1 541 5.3E-113 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Vc3S01_A2046 615e9c9d4e66cd5f836c6d861bf6f819 541 Gene3D G3DSA:3.90.76.10 71 194 6.1E-180 T 12-10-2018 Vc3S01_A2046 615e9c9d4e66cd5f836c6d861bf6f819 541 Gene3D G3DSA:3.10.105.10 296 511 6.1E-180 T 12-10-2018 Vc3S01_A0043 a350eb21dfe3149bba6dc5b6249ae6a6 269 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 230 245 1.7E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Vc3S01_A0043 a350eb21dfe3149bba6dc5b6249ae6a6 269 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 245 261 1.7E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Vc3S01_A0043 a350eb21dfe3149bba6dc5b6249ae6a6 269 SUPERFAMILY SSF46689 214 264 5.82E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_A0043 a350eb21dfe3149bba6dc5b6249ae6a6 269 SMART SM00342 179 261 6.6E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_A0043 a350eb21dfe3149bba6dc5b6249ae6a6 269 Pfam PF12833 Helix-turn-helix domain 188 262 1.6E-10 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_A0043 a350eb21dfe3149bba6dc5b6249ae6a6 269 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 215 257 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Vc3S01_A0043 a350eb21dfe3149bba6dc5b6249ae6a6 269 Gene3D G3DSA:1.10.10.60 160 269 9.2E-21 T 12-10-2018 Vc3S01_A1390 8a02a26f9c3f1fb8f97967b1dfc8a93a 201 Pfam PF13645 L,D-transpeptidase catalytic domain 38 199 1.8E-65 T 12-10-2018 IPR032676 Putative L,D-transpeptidase tautomerase Vc3S01_3036 cd6c9299af4be89d992b2a8aefca0a70 227 Pfam PF12105 SpoU, rRNA methylase, C-terminal 162 217 7.7E-25 T 12-10-2018 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal GO:0009020 Vc3S01_3036 cd6c9299af4be89d992b2a8aefca0a70 227 Pfam PF00588 SpoU rRNA Methylase family 20 158 1.2E-34 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 Vc3S01_3036 cd6c9299af4be89d992b2a8aefca0a70 227 Gene3D G3DSA:3.40.1280.10 1 204 9.2E-59 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Vc3S01_3036 cd6c9299af4be89d992b2a8aefca0a70 227 Hamap MF_02060 tRNA (guanosine(18)-2'-O)-methyltransferase [trmH]. 2 196 34.85 T 12-10-2018 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase GO:0008168|GO:0030488 Vc3S01_3036 cd6c9299af4be89d992b2a8aefca0a70 227 SUPERFAMILY SSF75217 4 173 1.83E-45 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases Vc3S01_A0276 bfbfb451734a88201c5ca206909af8db 104 SUPERFAMILY SSF54909 3 67 1.8E-12 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel Vc3S01_A0276 bfbfb451734a88201c5ca206909af8db 104 Pfam PF03992 Antibiotic biosynthesis monooxygenase 4 68 3.1E-5 T 12-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain Vc3S01_A0276 bfbfb451734a88201c5ca206909af8db 104 Gene3D G3DSA:3.30.70.100 2 101 1.0E-6 T 12-10-2018 Vc3S01_A1661 eb291e0de74d95d56d0e41f7cffbbfd6 525 Pfam PF12792 CSS motif domain associated with EAL 39 232 2.6E-7 T 12-10-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain Vc3S01_A1661 eb291e0de74d95d56d0e41f7cffbbfd6 525 Pfam PF00563 EAL domain 265 499 2.1E-65 T 12-10-2018 IPR001633 EAL domain Vc3S01_A1661 eb291e0de74d95d56d0e41f7cffbbfd6 525 SUPERFAMILY SSF141868 265 510 2.35E-73 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_A1661 eb291e0de74d95d56d0e41f7cffbbfd6 525 Gene3D G3DSA:3.20.20.450 258 518 4.9E-75 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_A1661 eb291e0de74d95d56d0e41f7cffbbfd6 525 SMART SM00052 257 504 7.5E-78 T 12-10-2018 IPR001633 EAL domain Vc3S01_2734 b17884badee96a14e4b9df6a66ab3950 211 PIRSF PIRSF005229 1 210 3.4E-96 T 12-10-2018 IPR002680 Alternative oxidase GO:0009916|GO:0055114 Vc3S01_2734 b17884badee96a14e4b9df6a66ab3950 211 Gene3D G3DSA:1.20.1260.140 1 209 2.5E-84 T 12-10-2018 IPR038659 Alternative oxidase superfamily Vc3S01_2734 b17884badee96a14e4b9df6a66ab3950 211 SUPERFAMILY SSF47240 65 201 5.41E-5 T 12-10-2018 IPR009078 Ferritin-like superfamily Vc3S01_2734 b17884badee96a14e4b9df6a66ab3950 211 Pfam PF01786 Alternative oxidase 3 199 5.5E-77 T 12-10-2018 IPR002680 Alternative oxidase GO:0009916|GO:0055114 Vc3S01_0556 060c1a0f5db481e58834e5a41da89739 117 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 1.7E-52 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_0556 060c1a0f5db481e58834e5a41da89739 117 Pfam PF01245 Ribosomal protein L19 3 113 7.1E-51 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_0556 060c1a0f5db481e58834e5a41da89739 117 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 31.52 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_0556 060c1a0f5db481e58834e5a41da89739 117 PIRSF PIRSF002191 1 117 1.1E-51 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_0556 060c1a0f5db481e58834e5a41da89739 117 SUPERFAMILY SSF50104 2 115 5.31E-48 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily Vc3S01_0556 060c1a0f5db481e58834e5a41da89739 117 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 12-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_0556 060c1a0f5db481e58834e5a41da89739 117 PRINTS PR00061 Ribosomal protein L19 signature 88 113 1.6E-41 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_0556 060c1a0f5db481e58834e5a41da89739 117 PRINTS PR00061 Ribosomal protein L19 signature 34 63 1.6E-41 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_0556 060c1a0f5db481e58834e5a41da89739 117 PRINTS PR00061 Ribosomal protein L19 signature 4 33 1.6E-41 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_0556 060c1a0f5db481e58834e5a41da89739 117 Gene3D G3DSA:2.30.30.790 3 117 1.6E-17 T 12-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_1230 f1fa68440f8fd24fbc3004b6d9fc0be7 475 TIGRFAM TIGR03152 cyto_c552_HCOOH: formate-dependent cytochrome c nitrite reductase, c552 subunit 36 473 1.2E-248 T 12-10-2018 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 Vc3S01_1230 f1fa68440f8fd24fbc3004b6d9fc0be7 475 Hamap MF_01182 Cytochrome c-552 [nrfA]. 3 475 58.283 T 12-10-2018 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 Vc3S01_1230 f1fa68440f8fd24fbc3004b6d9fc0be7 475 SUPERFAMILY SSF48695 37 470 1.82E-163 T 12-10-2018 IPR036280 Multiheme cytochrome superfamily Vc3S01_1230 f1fa68440f8fd24fbc3004b6d9fc0be7 475 Gene3D G3DSA:1.10.1130.10 40 469 7.7E-187 T 12-10-2018 Vc3S01_1230 f1fa68440f8fd24fbc3004b6d9fc0be7 475 PIRSF PIRSF000243 26 474 1.3E-124 T 12-10-2018 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 Vc3S01_1230 f1fa68440f8fd24fbc3004b6d9fc0be7 475 Gene3D G3DSA:1.20.140.10 309 451 7.7E-187 T 12-10-2018 Vc3S01_1230 f1fa68440f8fd24fbc3004b6d9fc0be7 475 Pfam PF02335 Cytochrome c552 41 470 3.8E-179 T 12-10-2018 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 Vc3S01_0404 66c738878c67a10c2701b5eb9a9e8f8d 458 Pfam PF13638 PIN domain 9 150 1.9E-35 T 12-10-2018 IPR002716 PIN domain Vc3S01_0404 66c738878c67a10c2701b5eb9a9e8f8d 458 SUPERFAMILY SSF88723 7 155 2.26E-14 T 12-10-2018 IPR029060 PIN-like domain superfamily Vc3S01_0404 66c738878c67a10c2701b5eb9a9e8f8d 458 Gene3D G3DSA:3.40.50.300 245 456 4.8E-65 T 12-10-2018 Vc3S01_0404 66c738878c67a10c2701b5eb9a9e8f8d 458 Gene3D G3DSA:3.40.50.1010 3 155 4.5E-28 T 12-10-2018 Vc3S01_0404 66c738878c67a10c2701b5eb9a9e8f8d 458 Pfam PF02562 PhoH-like protein 248 452 8.5E-54 T 12-10-2018 IPR003714 PhoH-like protein GO:0005524 Vc3S01_0404 66c738878c67a10c2701b5eb9a9e8f8d 458 SMART SM00670 7 141 9.0E-12 T 12-10-2018 IPR002716 PIN domain Vc3S01_0404 66c738878c67a10c2701b5eb9a9e8f8d 458 SUPERFAMILY SSF52540 247 437 1.51E-28 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0991 9b4c68d69bc608c013b8aa5c3dac9ba0 328 Pfam PF01389 OmpA-like transmembrane domain 25 189 2.1E-25 T 12-10-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 Vc3S01_0991 9b4c68d69bc608c013b8aa5c3dac9ba0 328 SUPERFAMILY SSF56925 25 190 1.33E-31 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel Vc3S01_0991 9b4c68d69bc608c013b8aa5c3dac9ba0 328 Gene3D G3DSA:3.30.1330.60 205 321 1.4E-37 T 12-10-2018 IPR036737 OmpA-like domain superfamily Vc3S01_0991 9b4c68d69bc608c013b8aa5c3dac9ba0 328 Gene3D G3DSA:2.40.160.20 11 204 2.0E-41 T 12-10-2018 Vc3S01_0991 9b4c68d69bc608c013b8aa5c3dac9ba0 328 SUPERFAMILY SSF103088 202 319 2.35E-35 T 12-10-2018 IPR036737 OmpA-like domain superfamily Vc3S01_0991 9b4c68d69bc608c013b8aa5c3dac9ba0 328 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 282 301 1.7E-6 T 12-10-2018 Vc3S01_0991 9b4c68d69bc608c013b8aa5c3dac9ba0 328 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 264 281 1.7E-6 T 12-10-2018 Vc3S01_0991 9b4c68d69bc608c013b8aa5c3dac9ba0 328 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 302 322 1.7E-6 T 12-10-2018 Vc3S01_0991 9b4c68d69bc608c013b8aa5c3dac9ba0 328 PRINTS PR01021 OMPA domain signature 249 264 4.0E-11 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Vc3S01_0991 9b4c68d69bc608c013b8aa5c3dac9ba0 328 PRINTS PR01021 OMPA domain signature 264 280 4.0E-11 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Vc3S01_0991 9b4c68d69bc608c013b8aa5c3dac9ba0 328 Pfam PF00691 OmpA family 220 313 1.0E-23 T 12-10-2018 IPR006665 OmpA-like domain Vc3S01_A1258 73ab07821fc7419b3270d1aa7cce7811 702 Gene3D G3DSA:2.60.120.380 523 623 4.3E-32 T 12-10-2018 Vc3S01_A1258 73ab07821fc7419b3270d1aa7cce7811 702 Gene3D G3DSA:3.10.450.40 124 209 1.5E-21 T 12-10-2018 Vc3S01_A1258 73ab07821fc7419b3270d1aa7cce7811 702 Pfam PF07504 Fungalysin/Thermolysin Propeptide Motif 72 115 1.4E-15 T 12-10-2018 IPR011096 FTP domain Vc3S01_A1258 73ab07821fc7419b3270d1aa7cce7811 702 Pfam PF03413 Peptidase propeptide and YPEB domain 135 203 1.1E-8 T 12-10-2018 IPR025711 PepSY domain Vc3S01_A1258 73ab07821fc7419b3270d1aa7cce7811 702 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 220 358 1.3E-39 T 12-10-2018 IPR013856 Peptidase M4 domain GO:0004222 Vc3S01_A1258 73ab07821fc7419b3270d1aa7cce7811 702 Gene3D G3DSA:3.10.170.10 210 362 4.5E-62 T 12-10-2018 Vc3S01_A1258 73ab07821fc7419b3270d1aa7cce7811 702 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 543 610 3.7E-12 T 12-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial Vc3S01_A1258 73ab07821fc7419b3270d1aa7cce7811 702 SUPERFAMILY SSF55486 212 508 1.81E-82 T 12-10-2018 Vc3S01_A1258 73ab07821fc7419b3270d1aa7cce7811 702 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 361 506 7.9E-37 T 12-10-2018 IPR001570 Peptidase M4, C-terminal GO:0004222 Vc3S01_A1258 73ab07821fc7419b3270d1aa7cce7811 702 Gene3D G3DSA:3.10.450.490 33 123 1.6E-24 T 12-10-2018 Vc3S01_A1258 73ab07821fc7419b3270d1aa7cce7811 702 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 370 381 1.9E-26 T 12-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 Vc3S01_A1258 73ab07821fc7419b3270d1aa7cce7811 702 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 315 335 1.9E-26 T 12-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 Vc3S01_A1258 73ab07821fc7419b3270d1aa7cce7811 702 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 433 449 1.9E-26 T 12-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 Vc3S01_A1258 73ab07821fc7419b3270d1aa7cce7811 702 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 349 365 1.9E-26 T 12-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 Vc3S01_A1258 73ab07821fc7419b3270d1aa7cce7811 702 Gene3D G3DSA:1.10.390.10 363 511 1.8E-50 T 12-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily Vc3S01_A1270 34c8808944f20702e2f40c2ed9d14e25 295 Gene3D G3DSA:3.40.190.10 88 168 1.7E-9 T 12-10-2018 Vc3S01_A1270 34c8808944f20702e2f40c2ed9d14e25 295 Gene3D G3DSA:1.10.10.10 1 86 3.9E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A1270 34c8808944f20702e2f40c2ed9d14e25 295 SUPERFAMILY SSF46785 4 81 2.45E-11 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A1270 34c8808944f20702e2f40c2ed9d14e25 295 Pfam PF03466 LysR substrate binding domain 95 241 2.8E-7 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_A1270 34c8808944f20702e2f40c2ed9d14e25 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 1.5E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A1270 34c8808944f20702e2f40c2ed9d14e25 295 Gene3D G3DSA:3.40.190.10 169 233 1.7E-9 T 12-10-2018 Vc3S01_A1270 34c8808944f20702e2f40c2ed9d14e25 295 SUPERFAMILY SSF53850 95 292 3.26E-12 T 12-10-2018 Vc3S01_1107 55cabf714196e19cbe95f281d75e58df 376 Gene3D G3DSA:3.40.1090.10 15 122 1.9E-10 T 12-10-2018 Vc3S01_1107 55cabf714196e19cbe95f281d75e58df 376 Gene3D G3DSA:3.40.1090.10 139 260 6.2E-6 T 12-10-2018 Vc3S01_1107 55cabf714196e19cbe95f281d75e58df 376 Pfam PF01734 Patatin-like phospholipase 30 199 4.3E-19 T 12-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 Vc3S01_1107 55cabf714196e19cbe95f281d75e58df 376 SUPERFAMILY SSF52151 24 300 7.06E-36 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Vc3S01_0575 47391851f8b15d7970e55a998a50a7d4 305 SUPERFAMILY SSF52540 3 232 6.29E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0575 47391851f8b15d7970e55a998a50a7d4 305 Gene3D G3DSA:3.40.50.300 1 237 5.2E-65 T 12-10-2018 Vc3S01_0575 47391851f8b15d7970e55a998a50a7d4 305 SMART SM00382 29 212 2.8E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_0575 47391851f8b15d7970e55a998a50a7d4 305 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_0575 47391851f8b15d7970e55a998a50a7d4 305 Pfam PF00005 ABC transporter 20 164 5.3E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_A1190 31f591f2c8308cdd3b87273f3185ba15 300 Pfam PF03466 LysR substrate binding domain 89 289 2.4E-42 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_A1190 31f591f2c8308cdd3b87273f3185ba15 300 SUPERFAMILY SSF53850 90 296 2.48E-45 T 12-10-2018 Vc3S01_A1190 31f591f2c8308cdd3b87273f3185ba15 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.4E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A1190 31f591f2c8308cdd3b87273f3185ba15 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.4E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A1190 31f591f2c8308cdd3b87273f3185ba15 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.4E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A1190 31f591f2c8308cdd3b87273f3185ba15 300 Gene3D G3DSA:1.10.10.10 3 86 1.6E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A1190 31f591f2c8308cdd3b87273f3185ba15 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 63 6.7E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A1190 31f591f2c8308cdd3b87273f3185ba15 300 Gene3D G3DSA:3.40.190.290 91 293 8.7E-66 T 12-10-2018 Vc3S01_A1190 31f591f2c8308cdd3b87273f3185ba15 300 SUPERFAMILY SSF46785 3 111 1.36E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A0609 e4432937456ca024a8f0730c38f2b4e0 181 Gene3D G3DSA:3.40.30.10 26 181 2.1E-44 T 12-10-2018 Vc3S01_A0609 e4432937456ca024a8f0730c38f2b4e0 181 PRINTS PR01011 Glutathione peroxidase family signature 143 152 7.2E-12 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 Vc3S01_A0609 e4432937456ca024a8f0730c38f2b4e0 181 PRINTS PR01011 Glutathione peroxidase family signature 48 65 7.2E-12 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 Vc3S01_A0609 e4432937456ca024a8f0730c38f2b4e0 181 PRINTS PR01011 Glutathione peroxidase family signature 83 99 7.2E-12 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 Vc3S01_A0609 e4432937456ca024a8f0730c38f2b4e0 181 ProSitePatterns PS00460 Glutathione peroxidases active site. 50 65 - T 12-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 Vc3S01_A0609 e4432937456ca024a8f0730c38f2b4e0 181 SUPERFAMILY SSF52833 40 181 2.52E-42 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Vc3S01_A0609 e4432937456ca024a8f0730c38f2b4e0 181 PIRSF PIRSF000303 2 181 1.8E-54 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 Vc3S01_A0609 e4432937456ca024a8f0730c38f2b4e0 181 Pfam PF00255 Glutathione peroxidase 45 133 5.6E-26 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 Vc3S01_2403 2bf915b986a2849cf471fa809acb04d1 252 SUPERFAMILY SSF102705 1 251 1.57E-83 T 12-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily Vc3S01_2403 2bf915b986a2849cf471fa809acb04d1 252 Gene3D G3DSA:3.40.1390.30 14 237 1.1E-82 T 12-10-2018 Vc3S01_2403 2bf915b986a2849cf471fa809acb04d1 252 Gene3D G3DSA:3.40.1390.30 97 223 1.1E-82 T 12-10-2018 Vc3S01_2403 2bf915b986a2849cf471fa809acb04d1 252 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 6 238 1.0E-59 T 12-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 Vc3S01_2403 2bf915b986a2849cf471fa809acb04d1 252 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 251 2.6E-70 T 12-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 Vc3S01_2593 a8a9e79976d5b164cd81ead0df8327dc 638 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 336 350 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Vc3S01_2593 a8a9e79976d5b164cd81ead0df8327dc 638 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 633 35.864 T 12-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 Vc3S01_2593 a8a9e79976d5b164cd81ead0df8327dc 638 SUPERFAMILY SSF53067 1 182 7.45E-65 T 12-10-2018 Vc3S01_2593 a8a9e79976d5b164cd81ead0df8327dc 638 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Vc3S01_2593 a8a9e79976d5b164cd81ead0df8327dc 638 Gene3D G3DSA:3.90.640.10 228 315 5.0E-165 T 12-10-2018 Vc3S01_2593 a8a9e79976d5b164cd81ead0df8327dc 638 Gene3D G3DSA:3.30.420.40 5 378 5.0E-165 T 12-10-2018 Vc3S01_2593 a8a9e79976d5b164cd81ead0df8327dc 638 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 191 204 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Vc3S01_2593 a8a9e79976d5b164cd81ead0df8327dc 638 PRINTS PR00301 70kDa heat shock protein signature 53 61 1.5E-78 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Vc3S01_2593 a8a9e79976d5b164cd81ead0df8327dc 638 PRINTS PR00301 70kDa heat shock protein signature 31 43 1.5E-78 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Vc3S01_2593 a8a9e79976d5b164cd81ead0df8327dc 638 PRINTS PR00301 70kDa heat shock protein signature 333 349 1.5E-78 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Vc3S01_2593 a8a9e79976d5b164cd81ead0df8327dc 638 PRINTS PR00301 70kDa heat shock protein signature 197 207 1.5E-78 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Vc3S01_2593 a8a9e79976d5b164cd81ead0df8327dc 638 PRINTS PR00301 70kDa heat shock protein signature 387 406 1.5E-78 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Vc3S01_2593 a8a9e79976d5b164cd81ead0df8327dc 638 PRINTS PR00301 70kDa heat shock protein signature 364 384 1.5E-78 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Vc3S01_2593 a8a9e79976d5b164cd81ead0df8327dc 638 PRINTS PR00301 70kDa heat shock protein signature 468 484 1.5E-78 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Vc3S01_2593 a8a9e79976d5b164cd81ead0df8327dc 638 PRINTS PR00301 70kDa heat shock protein signature 137 157 1.5E-78 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Vc3S01_2593 a8a9e79976d5b164cd81ead0df8327dc 638 PRINTS PR00301 70kDa heat shock protein signature 3 16 1.5E-78 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Vc3S01_2593 a8a9e79976d5b164cd81ead0df8327dc 638 Gene3D G3DSA:2.60.34.10 382 522 7.5E-64 T 12-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 Vc3S01_2593 a8a9e79976d5b164cd81ead0df8327dc 638 SUPERFAMILY SSF100934 534 607 6.28E-6 T 12-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 Vc3S01_2593 a8a9e79976d5b164cd81ead0df8327dc 638 SUPERFAMILY SSF53067 186 381 9.72E-65 T 12-10-2018 Vc3S01_2593 a8a9e79976d5b164cd81ead0df8327dc 638 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 602 1.4E-282 T 12-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 Vc3S01_2593 a8a9e79976d5b164cd81ead0df8327dc 638 Gene3D G3DSA:3.30.420.40 179 365 5.0E-165 T 12-10-2018 Vc3S01_2593 a8a9e79976d5b164cd81ead0df8327dc 638 Pfam PF00012 Hsp70 protein 4 601 7.0E-259 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Vc3S01_2593 a8a9e79976d5b164cd81ead0df8327dc 638 Gene3D G3DSA:1.20.1270.10 523 602 1.1E-26 T 12-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 Vc3S01_2593 a8a9e79976d5b164cd81ead0df8327dc 638 SUPERFAMILY SSF100920 383 539 3.53E-59 T 12-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 Vc3S01_A1777 9ac7ee6783ec91a5bf2fdd1d0d21ec08 526 SMART SM00382 18 230 5.1E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_A1777 9ac7ee6783ec91a5bf2fdd1d0d21ec08 526 SMART SM00382 336 505 6.4E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_A1777 9ac7ee6783ec91a5bf2fdd1d0d21ec08 526 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_A1777 9ac7ee6783ec91a5bf2fdd1d0d21ec08 526 Pfam PF00005 ABC transporter 10 176 2.3E-20 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_A1777 9ac7ee6783ec91a5bf2fdd1d0d21ec08 526 SUPERFAMILY SSF52540 303 519 3.58E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A1777 9ac7ee6783ec91a5bf2fdd1d0d21ec08 526 Gene3D G3DSA:3.40.50.300 274 526 1.5E-52 T 12-10-2018 Vc3S01_A1777 9ac7ee6783ec91a5bf2fdd1d0d21ec08 526 SUPERFAMILY SSF52540 3 230 9.02E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A1777 9ac7ee6783ec91a5bf2fdd1d0d21ec08 526 Pfam PF00005 ABC transporter 331 459 1.7E-19 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_A1777 9ac7ee6783ec91a5bf2fdd1d0d21ec08 526 Pfam PF12848 ABC transporter 216 300 3.0E-22 T 12-10-2018 IPR032781 ABC-transporter extension domain Vc3S01_A1777 9ac7ee6783ec91a5bf2fdd1d0d21ec08 526 Gene3D G3DSA:3.40.50.300 2 273 1.5E-55 T 12-10-2018 Vc3S01_0671 c510b25db65738ea600777d14765d6b6 428 SUPERFAMILY SSF52540 134 379 2.2E-16 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0586 5667845ba748b14d621ec51c547fd820 796 Gene3D G3DSA:3.40.710.10 90 747 5.1E-262 T 12-10-2018 Vc3S01_0586 5667845ba748b14d621ec51c547fd820 796 Pfam PF00905 Penicillin binding protein transpeptidase domain 459 697 1.6E-23 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Vc3S01_0586 5667845ba748b14d621ec51c547fd820 796 SUPERFAMILY SSF53955 193 389 1.15E-68 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily Vc3S01_0586 5667845ba748b14d621ec51c547fd820 796 SUPERFAMILY SSF56601 349 780 7.09E-108 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Vc3S01_0586 5667845ba748b14d621ec51c547fd820 796 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 55 778 0.0 T 12-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Vc3S01_0586 5667845ba748b14d621ec51c547fd820 796 Pfam PF00912 Transglycosylase 196 366 4.6E-59 T 12-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Vc3S01_0586 5667845ba748b14d621ec51c547fd820 796 PIRSF PIRSF002799 14 796 0.0 T 12-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Vc3S01_0586 5667845ba748b14d621ec51c547fd820 796 Gene3D G3DSA:1.10.3810.10 188 391 5.1E-262 T 12-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Vc3S01_0586 5667845ba748b14d621ec51c547fd820 796 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 200 734 6.9E-159 T 12-10-2018 Vc3S01_0586 5667845ba748b14d621ec51c547fd820 796 Pfam PF14814 Bifunctional transglycosylase second domain 100 183 1.9E-26 T 12-10-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Vc3S01_0586 5667845ba748b14d621ec51c547fd820 796 Gene3D G3DSA:3.30.2060.10 98 187 5.1E-262 T 12-10-2018 Vc3S01_0467 962f286713427003f3fd1f36ef2074cd 306 Gene3D G3DSA:3.40.710.10 1 306 1.3E-108 T 12-10-2018 Vc3S01_0467 962f286713427003f3fd1f36ef2074cd 306 Pfam PF04960 Glutaminase 22 306 9.3E-112 T 12-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 Vc3S01_0467 962f286713427003f3fd1f36ef2074cd 306 TIGRFAM TIGR03814 Gln_ase: glutaminase A 8 306 7.9E-130 T 12-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 Vc3S01_0467 962f286713427003f3fd1f36ef2074cd 306 SUPERFAMILY SSF56601 4 306 9.48E-113 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Vc3S01_0467 962f286713427003f3fd1f36ef2074cd 306 Hamap MF_00313 Glutaminase [glsA]. 4 306 46.968 T 12-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 Vc3S01_1120 445129171cd54b01da4d76ab3890b5a3 230 Pfam PF00154 recA bacterial DNA recombination protein 29 125 3.8E-5 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Vc3S01_1120 445129171cd54b01da4d76ab3890b5a3 230 PIRSF PIRSF037290 1 230 2.3E-75 T 12-10-2018 IPR017166 Uncharacterised conserved protein UCP037290 Vc3S01_1120 445129171cd54b01da4d76ab3890b5a3 230 Gene3D G3DSA:3.40.50.300 52 158 1.8E-27 T 12-10-2018 Vc3S01_1120 445129171cd54b01da4d76ab3890b5a3 230 SUPERFAMILY SSF52540 48 159 1.15E-26 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0561 d41b0ae080291ae733288b2d43e74802 289 Pfam PF01478 Type IV leader peptidase family 135 244 2.6E-26 T 12-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 Vc3S01_0561 d41b0ae080291ae733288b2d43e74802 289 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 17 124 5.9E-33 T 12-10-2018 IPR010627 Peptidase A24A, N-terminal Vc3S01_0561 d41b0ae080291ae733288b2d43e74802 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 143 160 3.2E-30 T 12-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial Vc3S01_0561 d41b0ae080291ae733288b2d43e74802 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 201 211 3.2E-30 T 12-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial Vc3S01_0561 d41b0ae080291ae733288b2d43e74802 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 224 239 3.2E-30 T 12-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial Vc3S01_0561 d41b0ae080291ae733288b2d43e74802 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 212 223 3.2E-30 T 12-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial Vc3S01_2186 49dee6f04adf89f90cde1b51d3121e26 173 Pfam PF00691 OmpA family 72 167 1.7E-22 T 12-10-2018 IPR006665 OmpA-like domain Vc3S01_2186 49dee6f04adf89f90cde1b51d3121e26 173 PRINTS PR01021 OMPA domain signature 73 95 1.7E-16 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Vc3S01_2186 49dee6f04adf89f90cde1b51d3121e26 173 PRINTS PR01021 OMPA domain signature 103 118 1.7E-16 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Vc3S01_2186 49dee6f04adf89f90cde1b51d3121e26 173 PRINTS PR01021 OMPA domain signature 118 134 1.7E-16 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Vc3S01_2186 49dee6f04adf89f90cde1b51d3121e26 173 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 5 173 31.129 T 12-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 Vc3S01_2186 49dee6f04adf89f90cde1b51d3121e26 173 Gene3D G3DSA:3.30.1330.60 50 173 1.4E-40 T 12-10-2018 IPR036737 OmpA-like domain superfamily Vc3S01_2186 49dee6f04adf89f90cde1b51d3121e26 173 ProSitePatterns PS01068 OmpA-like domain. 105 149 - T 12-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 Vc3S01_2186 49dee6f04adf89f90cde1b51d3121e26 173 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 70 173 1.2E-44 T 12-10-2018 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GO:0009279 Vc3S01_2186 49dee6f04adf89f90cde1b51d3121e26 173 SUPERFAMILY SSF103088 57 172 1.7E-33 T 12-10-2018 IPR036737 OmpA-like domain superfamily Vc3S01_A0106 5b1615b600b674632066785fcfb7cf9d 330 SUPERFAMILY SSF161098 99 288 2.22E-19 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_A0106 5b1615b600b674632066785fcfb7cf9d 330 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 122 308 2.5E-16 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Vc3S01_A0106 5b1615b600b674632066785fcfb7cf9d 330 Gene3D G3DSA:1.10.3720.10 92 307 3.5E-15 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_0181 4f94e85ef04920e948bc32c452e60789 448 PIRSF PIRSF006060 1 446 9.2E-50 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Vc3S01_0181 4f94e85ef04920e948bc32c452e60789 448 Pfam PF13520 Amino acid permease 8 421 1.6E-37 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Vc3S01_0181 4f94e85ef04920e948bc32c452e60789 448 Gene3D G3DSA:1.20.1740.10 1 443 6.6E-58 T 12-10-2018 Vc3S01_1071 0a70dfda928290f9769f77fb4212fcc4 319 PIRSF PIRSF006621 1 318 1.1E-74 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 Vc3S01_1071 0a70dfda928290f9769f77fb4212fcc4 319 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 310 52.955 T 12-10-2018 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 Vc3S01_1071 0a70dfda928290f9769f77fb4212fcc4 319 Gene3D G3DSA:1.20.225.30 243 314 8.3E-27 T 12-10-2018 Vc3S01_1071 0a70dfda928290f9769f77fb4212fcc4 319 Pfam PF01207 Dihydrouridine synthase (Dus) 5 295 1.3E-78 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 Vc3S01_1071 0a70dfda928290f9769f77fb4212fcc4 319 SUPERFAMILY SSF51395 1 313 8.06E-74 T 12-10-2018 Vc3S01_1071 0a70dfda928290f9769f77fb4212fcc4 319 Gene3D G3DSA:3.20.20.70 1 242 1.0E-80 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_1071 0a70dfda928290f9769f77fb4212fcc4 319 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 12-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 Vc3S01_3173 8c30802f032f4071ee0107ccabe2a343 364 Gene3D G3DSA:3.10.350.10 38 85 1.7E-14 T 12-10-2018 IPR036779 LysM domain superfamily Vc3S01_3173 8c30802f032f4071ee0107ccabe2a343 364 SMART SM00257 39 87 2.0E-4 T 12-10-2018 IPR018392 LysM domain Vc3S01_3173 8c30802f032f4071ee0107ccabe2a343 364 Pfam PF01476 LysM domain 40 85 1.2E-12 T 12-10-2018 IPR018392 LysM domain Vc3S01_3173 8c30802f032f4071ee0107ccabe2a343 364 SUPERFAMILY SSF54106 38 86 8.76E-7 T 12-10-2018 Vc3S01_A0236 ea2b13abac3e4d2786c50f029a072658 300 Gene3D G3DSA:3.40.190.10 94 279 1.1E-15 T 12-10-2018 Vc3S01_A0236 ea2b13abac3e4d2786c50f029a072658 300 SUPERFAMILY SSF46785 2 110 8.49E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A0236 ea2b13abac3e4d2786c50f029a072658 300 Gene3D G3DSA:3.40.190.10 163 268 1.1E-15 T 12-10-2018 Vc3S01_A0236 ea2b13abac3e4d2786c50f029a072658 300 Gene3D G3DSA:1.10.10.10 5 69 6.8E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A0236 ea2b13abac3e4d2786c50f029a072658 300 SUPERFAMILY SSF53850 89 292 2.53E-28 T 12-10-2018 Vc3S01_A0236 ea2b13abac3e4d2786c50f029a072658 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 9.1E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A0236 ea2b13abac3e4d2786c50f029a072658 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.4E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A0236 ea2b13abac3e4d2786c50f029a072658 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.4E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A0236 ea2b13abac3e4d2786c50f029a072658 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.4E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A0236 ea2b13abac3e4d2786c50f029a072658 300 Pfam PF03466 LysR substrate binding domain 89 292 9.5E-27 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_2139 7db2c405b4312224e19da38c12cc9114 112 Gene3D G3DSA:1.25.40.10 2 111 2.8E-13 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_2139 7db2c405b4312224e19da38c12cc9114 112 PIRSF PIRSF017117 1 110 1.2E-40 T 12-10-2018 IPR016684 Type III secretion system chaperone, YscY Vc3S01_2139 7db2c405b4312224e19da38c12cc9114 112 Pfam PF14559 Tetratricopeptide repeat 19 74 1.4E-8 T 12-10-2018 Vc3S01_2139 7db2c405b4312224e19da38c12cc9114 112 SUPERFAMILY SSF48452 5 109 8.86E-17 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_1220 59377a3d365a5442fb30c6103958fe94 170 Pfam PF13740 ACT domain 5 67 4.3E-10 T 12-10-2018 Vc3S01_1220 59377a3d365a5442fb30c6103958fe94 170 PIRSF PIRSF028103 1 169 1.1E-41 T 12-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 Vc3S01_1220 59377a3d365a5442fb30c6103958fe94 170 SUPERFAMILY SSF55021 89 167 3.04E-10 T 12-10-2018 Vc3S01_1220 59377a3d365a5442fb30c6103958fe94 170 Gene3D G3DSA:3.30.70.260 85 169 5.5E-13 T 12-10-2018 Vc3S01_A1160 5a2e8431f24f77a6fdbede7f0cd7db38 441 Pfam PF07394 Protein of unknown function (DUF1501) 36 420 2.2E-60 T 12-10-2018 IPR010869 Protein of unknown function DUF1501 Vc3S01_A1160 5a2e8431f24f77a6fdbede7f0cd7db38 441 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 32 1.3E-4 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Vc3S01_A1087 ec46d5a86b288f3bb5dd61ef85753d8f 636 Pfam PF00990 Diguanylate cyclase, GGDEF domain 204 357 4.5E-13 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A1087 ec46d5a86b288f3bb5dd61ef85753d8f 636 SMART SM00065 14 165 0.0032 T 12-10-2018 IPR003018 GAF domain GO:0005515 Vc3S01_A1087 ec46d5a86b288f3bb5dd61ef85753d8f 636 Gene3D G3DSA:3.20.20.450 371 628 8.1E-87 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_A1087 ec46d5a86b288f3bb5dd61ef85753d8f 636 Gene3D G3DSA:3.30.70.270 189 362 6.1E-18 T 12-10-2018 Vc3S01_A1087 ec46d5a86b288f3bb5dd61ef85753d8f 636 SUPERFAMILY SSF55781 17 162 2.35E-17 T 12-10-2018 Vc3S01_A1087 ec46d5a86b288f3bb5dd61ef85753d8f 636 SMART SM00052 372 617 4.6E-94 T 12-10-2018 IPR001633 EAL domain Vc3S01_A1087 ec46d5a86b288f3bb5dd61ef85753d8f 636 SMART SM00267 192 362 3.6E-6 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A1087 ec46d5a86b288f3bb5dd61ef85753d8f 636 Gene3D G3DSA:3.30.450.40 12 166 4.5E-9 T 12-10-2018 IPR029016 GAF-like domain superfamily Vc3S01_A1087 ec46d5a86b288f3bb5dd61ef85753d8f 636 SUPERFAMILY SSF55073 209 364 2.28E-16 T 12-10-2018 IPR029787 Nucleotide cyclase Vc3S01_A1087 ec46d5a86b288f3bb5dd61ef85753d8f 636 SUPERFAMILY SSF141868 377 626 9.02E-83 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_A1087 ec46d5a86b288f3bb5dd61ef85753d8f 636 Pfam PF00563 EAL domain 380 612 3.5E-67 T 12-10-2018 IPR001633 EAL domain Vc3S01_A1087 ec46d5a86b288f3bb5dd61ef85753d8f 636 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 202 360 2.3E-13 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_2795 eac050978016b50b4d91267074c7d15b 196 Pfam PF00355 Rieske [2Fe-2S] domain 55 174 6.7E-12 T 12-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 Vc3S01_2795 eac050978016b50b4d91267074c7d15b 196 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 5 40 1.6E-14 T 12-10-2018 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 Vc3S01_2795 eac050978016b50b4d91267074c7d15b 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 162 174 3.0E-7 T 12-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 Vc3S01_2795 eac050978016b50b4d91267074c7d15b 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 149 161 3.0E-7 T 12-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 Vc3S01_2795 eac050978016b50b4d91267074c7d15b 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 119 130 3.0E-7 T 12-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 Vc3S01_2795 eac050978016b50b4d91267074c7d15b 196 Gene3D G3DSA:1.20.5.510 1 40 1.4E-5 T 12-10-2018 Vc3S01_2795 eac050978016b50b4d91267074c7d15b 196 Gene3D G3DSA:2.102.10.10 43 190 1.3E-47 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Vc3S01_2795 eac050978016b50b4d91267074c7d15b 196 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 9 190 1.6E-74 T 12-10-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 Vc3S01_2795 eac050978016b50b4d91267074c7d15b 196 SUPERFAMILY SSF50022 30 189 1.89E-44 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Vc3S01_p10083 9bba710fd3422bbe87dc0549e502c43c 104 ProDom PD012561 TRBD PLASMID CONJUGAL TRANSFER PRECURSOR SIGNAL MATING FORMATION PROBABLE PAIR 15 87 1.0E-13 T 12-10-2018 Vc3S01_p10083 9bba710fd3422bbe87dc0549e502c43c 104 Pfam PF05101 Type IV secretory pathway, VirB3-like protein 16 86 3.2E-10 T 12-10-2018 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB Vc3S01_0089 01c43f35e3683cdbc04e37a74dd95824 230 SUPERFAMILY SSF69618 3 229 1.96E-44 T 12-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Vc3S01_0089 01c43f35e3683cdbc04e37a74dd95824 230 Gene3D G3DSA:3.40.50.10090 20 149 6.2E-62 T 12-10-2018 Vc3S01_0089 01c43f35e3683cdbc04e37a74dd95824 230 Pfam PF02602 Uroporphyrinogen-III synthase HemD 4 224 2.0E-33 T 12-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Vc3S01_0089 01c43f35e3683cdbc04e37a74dd95824 230 Gene3D G3DSA:3.40.50.10090 2 228 6.2E-62 T 12-10-2018 Vc3S01_A1304 e7863979a559bc3335fb99c13095a885 172 SUPERFAMILY SSF141452 3 168 1.96E-38 T 12-10-2018 IPR036624 Hcp1-like superfamily Vc3S01_A1304 e7863979a559bc3335fb99c13095a885 172 Pfam PF05638 Type VI secretion system effector, Hcp 6 155 3.3E-29 T 12-10-2018 IPR008514 Type VI secretion system effector, Hcp Vc3S01_A1304 e7863979a559bc3335fb99c13095a885 172 Gene3D G3DSA:2.30.110.20 2 172 2.7E-61 T 12-10-2018 IPR036624 Hcp1-like superfamily Vc3S01_A1304 e7863979a559bc3335fb99c13095a885 172 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 168 1.2E-63 T 12-10-2018 IPR008514 Type VI secretion system effector, Hcp Vc3S01_1658 5936abcee2b75bb64fd266e34808d09f 787 SUPERFAMILY SSF56784 500 781 4.88E-47 T 12-10-2018 IPR036412 HAD-like superfamily Vc3S01_1658 5936abcee2b75bb64fd266e34808d09f 787 Pfam PF00702 haloacid dehalogenase-like hydrolase 497 694 7.3E-30 T 12-10-2018 Vc3S01_1658 5936abcee2b75bb64fd266e34808d09f 787 Gene3D G3DSA:3.40.50.1000 482 720 9.1E-67 T 12-10-2018 IPR023214 HAD superfamily Vc3S01_1658 5936abcee2b75bb64fd266e34808d09f 787 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 245 783 1.8E-160 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Vc3S01_1658 5936abcee2b75bb64fd266e34808d09f 787 SUPERFAMILY SSF81665 250 765 1.28E-11 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Vc3S01_1658 5936abcee2b75bb64fd266e34808d09f 787 ProSitePatterns PS01229 Hypothetical cof family signature 2. 681 703 - T 12-10-2018 Vc3S01_1658 5936abcee2b75bb64fd266e34808d09f 787 PRINTS PR00943 Copper-transporting ATPase signature 296 314 9.0E-6 T 12-10-2018 Vc3S01_1658 5936abcee2b75bb64fd266e34808d09f 787 PRINTS PR00943 Copper-transporting ATPase signature 659 676 9.0E-6 T 12-10-2018 Vc3S01_1658 5936abcee2b75bb64fd266e34808d09f 787 PRINTS PR00943 Copper-transporting ATPase signature 135 155 9.0E-6 T 12-10-2018 Vc3S01_1658 5936abcee2b75bb64fd266e34808d09f 787 PRINTS PR00943 Copper-transporting ATPase signature 276 295 9.0E-6 T 12-10-2018 Vc3S01_1658 5936abcee2b75bb64fd266e34808d09f 787 SUPERFAMILY SSF55008 85 162 9.42E-18 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Vc3S01_1658 5936abcee2b75bb64fd266e34808d09f 787 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 279 761 2.7E-74 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Vc3S01_1658 5936abcee2b75bb64fd266e34808d09f 787 Gene3D G3DSA:3.30.70.100 88 173 3.3E-14 T 12-10-2018 Vc3S01_1658 5936abcee2b75bb64fd266e34808d09f 787 Gene3D G3DSA:2.70.150.20 292 407 7.4E-33 T 12-10-2018 Vc3S01_1658 5936abcee2b75bb64fd266e34808d09f 787 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 273 785 2.0E-122 T 12-10-2018 Vc3S01_1658 5936abcee2b75bb64fd266e34808d09f 787 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 503 509 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Vc3S01_1658 5936abcee2b75bb64fd266e34808d09f 787 Pfam PF00122 E1-E2 ATPase 318 478 1.3E-45 T 12-10-2018 Vc3S01_1658 5936abcee2b75bb64fd266e34808d09f 787 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 353 367 4.6E-24 T 12-10-2018 Vc3S01_1658 5936abcee2b75bb64fd266e34808d09f 787 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 704 716 4.6E-24 T 12-10-2018 Vc3S01_1658 5936abcee2b75bb64fd266e34808d09f 787 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 629 639 4.6E-24 T 12-10-2018 Vc3S01_1658 5936abcee2b75bb64fd266e34808d09f 787 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 681 700 4.6E-24 T 12-10-2018 Vc3S01_1658 5936abcee2b75bb64fd266e34808d09f 787 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 501 515 4.6E-24 T 12-10-2018 Vc3S01_1658 5936abcee2b75bb64fd266e34808d09f 787 Pfam PF00403 Heavy-metal-associated domain 93 154 1.0E-8 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Vc3S01_1658 5936abcee2b75bb64fd266e34808d09f 787 SUPERFAMILY SSF81653 318 402 3.92E-23 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Vc3S01_1658 5936abcee2b75bb64fd266e34808d09f 787 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 4 86 6.0E-27 T 12-10-2018 IPR021993 Putative metal-binding domain of cation transport ATPase Vc3S01_1658 5936abcee2b75bb64fd266e34808d09f 787 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 228 783 6.2E-153 T 12-10-2018 Vc3S01_1658 5936abcee2b75bb64fd266e34808d09f 787 Gene3D G3DSA:3.40.1110.10 511 614 9.1E-67 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Vc3S01_0033 63e559c878a3763cab2d83f9dc7294c2 145 Pfam PF00011 Hsp20/alpha crystallin family 43 136 3.3E-19 T 12-10-2018 IPR002068 Alpha crystallin/Hsp20 domain Vc3S01_0033 63e559c878a3763cab2d83f9dc7294c2 145 SUPERFAMILY SSF49764 6 137 4.19E-23 T 12-10-2018 IPR008978 HSP20-like chaperone Vc3S01_0033 63e559c878a3763cab2d83f9dc7294c2 145 Gene3D G3DSA:2.60.40.790 34 137 2.8E-22 T 12-10-2018 IPR008978 HSP20-like chaperone Vc3S01_2797 0d3dbe248aebd3fd2ece23f0bec281f0 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 2.4E-65 T 12-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_2797 0d3dbe248aebd3fd2ece23f0bec281f0 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.467 T 12-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 Vc3S01_2797 0d3dbe248aebd3fd2ece23f0bec281f0 142 PIRSF PIRSF002181 1 142 1.7E-52 T 12-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 Vc3S01_2797 0d3dbe248aebd3fd2ece23f0bec281f0 142 Pfam PF00572 Ribosomal protein L13 15 138 3.6E-57 T 12-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 Vc3S01_2797 0d3dbe248aebd3fd2ece23f0bec281f0 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 12-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 Vc3S01_2797 0d3dbe248aebd3fd2ece23f0bec281f0 142 SUPERFAMILY SSF52161 1 140 1.15E-60 T 12-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 Vc3S01_2797 0d3dbe248aebd3fd2ece23f0bec281f0 142 Gene3D G3DSA:3.90.1180.10 1 142 4.8E-64 T 12-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 Vc3S01_A0535 5f17699dd619a2d986510436a6ad14ff 372 SMART SM00382 28 210 2.9E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_A0535 5f17699dd619a2d986510436a6ad14ff 372 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_A0535 5f17699dd619a2d986510436a6ad14ff 372 SUPERFAMILY SSF50331 236 364 2.41E-30 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Vc3S01_A0535 5f17699dd619a2d986510436a6ad14ff 372 Pfam PF00005 ABC transporter 20 161 1.4E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_A0535 5f17699dd619a2d986510436a6ad14ff 372 Gene3D G3DSA:3.40.50.300 1 238 2.2E-75 T 12-10-2018 Vc3S01_A0535 5f17699dd619a2d986510436a6ad14ff 372 Gene3D G3DSA:2.40.50.100 239 361 6.7E-50 T 12-10-2018 Vc3S01_A0535 5f17699dd619a2d986510436a6ad14ff 372 Pfam PF08402 TOBE domain 281 353 9.1E-11 T 12-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Vc3S01_A0535 5f17699dd619a2d986510436a6ad14ff 372 Gene3D G3DSA:2.40.50.140 287 344 6.7E-50 T 12-10-2018 Vc3S01_A0535 5f17699dd619a2d986510436a6ad14ff 372 SUPERFAMILY SSF52540 4 244 2.08E-85 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A2010 a79dda1386b3f33dc9b626eb8b834f08 209 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 5 206 8.8E-83 T 12-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 Vc3S01_A2010 a79dda1386b3f33dc9b626eb8b834f08 209 SUPERFAMILY SSF51569 4 208 4.21E-67 T 12-10-2018 Vc3S01_A2010 a79dda1386b3f33dc9b626eb8b834f08 209 Pfam PF01081 KDPG and KHG aldolase 4 198 2.8E-79 T 12-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 Vc3S01_A2010 a79dda1386b3f33dc9b626eb8b834f08 209 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 124 137 - T 12-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 Vc3S01_A2010 a79dda1386b3f33dc9b626eb8b834f08 209 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 36 45 - T 12-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 Vc3S01_A2010 a79dda1386b3f33dc9b626eb8b834f08 209 Gene3D G3DSA:3.20.20.70 1 209 1.8E-75 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_0686 bd6d064bd108e5cdce042452c51839a9 790 Gene3D G3DSA:1.10.287.100 264 302 6.1E-21 T 12-10-2018 Vc3S01_0686 bd6d064bd108e5cdce042452c51839a9 790 Gene3D G3DSA:3.30.1390.40 488 519 7.9E-255 T 12-10-2018 Vc3S01_0686 bd6d064bd108e5cdce042452c51839a9 790 Gene3D G3DSA:2.70.98.50 32 263 1.5E-97 T 12-10-2018 Vc3S01_0686 bd6d064bd108e5cdce042452c51839a9 790 Gene3D G3DSA:1.50.10.10 309 787 7.9E-255 T 12-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 Vc3S01_0686 bd6d064bd108e5cdce042452c51839a9 790 SUPERFAMILY SSF48208 275 786 3.6E-83 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Vc3S01_0686 bd6d064bd108e5cdce042452c51839a9 790 Pfam PF01204 Trehalase 581 769 6.7E-10 T 12-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 Vc3S01_1205 dfdc3e61474c7789c7d4964cca941852 292 Pfam PF02811 PHP domain 4 132 5.7E-9 T 12-10-2018 IPR004013 PHP domain GO:0003824 Vc3S01_1205 dfdc3e61474c7789c7d4964cca941852 292 Gene3D G3DSA:3.20.20.140 3 250 5.7E-83 T 12-10-2018 Vc3S01_1205 dfdc3e61474c7789c7d4964cca941852 292 Gene3D G3DSA:1.10.150.650 98 169 5.7E-83 T 12-10-2018 Vc3S01_1205 dfdc3e61474c7789c7d4964cca941852 292 SUPERFAMILY SSF89550 1 275 8.11E-55 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Vc3S01_1205 dfdc3e61474c7789c7d4964cca941852 292 SMART SM00481 3 70 1.3E-15 T 12-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal Vc3S01_0190 e6626b8b603154ea57ee8fe5cc8e31d5 287 Gene3D G3DSA:3.20.20.70 1 214 4.2E-64 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_0190 e6626b8b603154ea57ee8fe5cc8e31d5 287 Pfam PF01207 Dihydrouridine synthase (Dus) 1 279 4.7E-97 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 Vc3S01_0190 e6626b8b603154ea57ee8fe5cc8e31d5 287 Gene3D G3DSA:1.10.1200.80 216 287 3.7E-8 T 12-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 Vc3S01_0190 e6626b8b603154ea57ee8fe5cc8e31d5 287 SUPERFAMILY SSF51395 2 284 1.54E-75 T 12-10-2018 Vc3S01_0190 e6626b8b603154ea57ee8fe5cc8e31d5 287 PIRSF PIRSF006621 1 286 7.9E-86 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 Vc3S01_0190 e6626b8b603154ea57ee8fe5cc8e31d5 287 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 1 285 3.8E-113 T 12-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 Vc3S01_0190 e6626b8b603154ea57ee8fe5cc8e31d5 287 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 59 77 - T 12-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 Vc3S01_A1771 d32382e13c8f1f0d948aeda02e90d451 116 Gene3D G3DSA:3.40.250.10 23 116 3.2E-26 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily Vc3S01_A1771 d32382e13c8f1f0d948aeda02e90d451 116 Pfam PF00581 Rhodanese-like domain 31 111 6.6E-16 T 12-10-2018 IPR001763 Rhodanese-like domain Vc3S01_A1771 d32382e13c8f1f0d948aeda02e90d451 116 SMART SM00450 25 116 3.0E-19 T 12-10-2018 IPR001763 Rhodanese-like domain Vc3S01_A1771 d32382e13c8f1f0d948aeda02e90d451 116 SUPERFAMILY SSF52821 15 108 6.94E-27 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily Vc3S01_2820 71e711939bc5c23b439eefca1f146946 406 Pfam PF01966 HD domain 229 323 1.1E-7 T 12-10-2018 IPR006674 HD domain Vc3S01_2820 71e711939bc5c23b439eefca1f146946 406 Gene3D G3DSA:3.30.460.10 1 121 1.4E-29 T 12-10-2018 Vc3S01_2820 71e711939bc5c23b439eefca1f146946 406 SUPERFAMILY SSF81301 2 119 2.07E-31 T 12-10-2018 Vc3S01_2820 71e711939bc5c23b439eefca1f146946 406 SUPERFAMILY SSF81891 120 400 1.16E-54 T 12-10-2018 Vc3S01_2820 71e711939bc5c23b439eefca1f146946 406 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 406 52.081 T 12-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 Vc3S01_2820 71e711939bc5c23b439eefca1f146946 406 Hamap MF_01262 CCA-adding enzyme [cca]. 1 401 42.726 T 12-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 Vc3S01_2820 71e711939bc5c23b439eefca1f146946 406 PIRSF PIRSF000813 1 406 1.3E-203 T 12-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 Vc3S01_2820 71e711939bc5c23b439eefca1f146946 406 Pfam PF01743 Poly A polymerase head domain 3 122 6.4E-20 T 12-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 Vc3S01_2820 71e711939bc5c23b439eefca1f146946 406 Gene3D G3DSA:1.10.3090.10 122 403 5.6E-44 T 12-10-2018 Vc3S01_2820 71e711939bc5c23b439eefca1f146946 406 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 212 1.5E-13 T 12-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 Vc3S01_0785 aab961821ead8f5ebd1a3d7bc10b6b75 280 Pfam PF01148 Cytidylyltransferase family 2 280 8.0E-71 T 12-10-2018 Vc3S01_0785 aab961821ead8f5ebd1a3d7bc10b6b75 280 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 238 264 - T 12-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 Vc3S01_0215 b8b805330588aadec3c189e635008b5b 169 Gene3D G3DSA:1.20.120.1490 35 153 1.4E-26 T 12-10-2018 Vc3S01_0215 b8b805330588aadec3c189e635008b5b 169 Pfam PF07813 LTXXQ motif family protein 38 147 4.6E-22 T 12-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 Vc3S01_0215 b8b805330588aadec3c189e635008b5b 169 PIRSF PIRSF034445 1 165 2.3E-20 T 12-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 Vc3S01_0680 c533b5d5bba97412c49035846e264c6d 322 Pfam PF00482 Type II secretion system (T2SS), protein F 156 279 8.2E-18 T 12-10-2018 IPR018076 Type II secretion system F domain Vc3S01_0680 c533b5d5bba97412c49035846e264c6d 322 Gene3D G3DSA:1.20.81.30 147 258 4.6E-5 T 12-10-2018 Vc3S01_p20142 548d4cb46d0dc136839783f4acb6d87a 385 SUPERFAMILY SSF56349 170 373 2.0E-13 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Vc3S01_p20142 548d4cb46d0dc136839783f4acb6d87a 385 SUPERFAMILY SSF47823 63 160 3.33E-8 T 12-10-2018 Vc3S01_p20142 548d4cb46d0dc136839783f4acb6d87a 385 Gene3D G3DSA:1.10.443.10 170 372 1.6E-22 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Vc3S01_p20142 548d4cb46d0dc136839783f4acb6d87a 385 Pfam PF00589 Phage integrase family 186 371 1.3E-6 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Vc3S01_p20142 548d4cb46d0dc136839783f4acb6d87a 385 Gene3D G3DSA:1.10.150.130 55 163 3.8E-8 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal Vc3S01_2270 e56f76bd8b767ecbb6d31f2752ee78f7 242 Pfam PF10972 Peptidoglycan-binding protein, CsiV 2 241 1.3E-61 T 12-10-2018 IPR021241 Peptidoglycan-binding protein, CsiV Vc3S01_A1022 9a1926f9d6175121f7cb536507f93d5b 954 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 8 952 25.741 T 12-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 Vc3S01_A1022 9a1926f9d6175121f7cb536507f93d5b 954 SUPERFAMILY SSF53383 17 437 2.82E-100 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Vc3S01_A1022 9a1926f9d6175121f7cb536507f93d5b 954 SUPERFAMILY SSF53383 447 947 9.77E-99 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Vc3S01_A1022 9a1926f9d6175121f7cb536507f93d5b 954 Pfam PF02347 Glycine cleavage system P-protein 458 734 8.9E-9 T 12-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 Vc3S01_A1022 9a1926f9d6175121f7cb536507f93d5b 954 Pfam PF02347 Glycine cleavage system P-protein 17 438 3.2E-179 T 12-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 Vc3S01_A1022 9a1926f9d6175121f7cb536507f93d5b 954 Gene3D G3DSA:3.90.1150.10 760 896 5.3E-42 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Vc3S01_A1022 9a1926f9d6175121f7cb536507f93d5b 954 Gene3D G3DSA:3.40.640.10 95 353 4.5E-105 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Vc3S01_A1022 9a1926f9d6175121f7cb536507f93d5b 954 Gene3D G3DSA:3.40.640.10 522 748 1.4E-58 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Vc3S01_A1022 9a1926f9d6175121f7cb536507f93d5b 954 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 17 946 0.0 T 12-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 Vc3S01_2219 f712a24dbe43949afd42671c331ab442 334 SUPERFAMILY SSF53822 60 331 7.07E-95 T 12-10-2018 IPR028082 Periplasmic binding protein-like I Vc3S01_2219 f712a24dbe43949afd42671c331ab442 334 SMART SM00354 1 71 3.8E-38 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Vc3S01_2219 f712a24dbe43949afd42671c331ab442 334 Gene3D G3DSA:3.40.50.2300 69 322 2.8E-92 T 12-10-2018 Vc3S01_2219 f712a24dbe43949afd42671c331ab442 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.0E-6 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Vc3S01_2219 f712a24dbe43949afd42671c331ab442 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.0E-6 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Vc3S01_2219 f712a24dbe43949afd42671c331ab442 334 SUPERFAMILY SSF47413 1 59 1.06E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Vc3S01_2219 f712a24dbe43949afd42671c331ab442 334 Gene3D G3DSA:3.40.50.2300 161 323 2.8E-92 T 12-10-2018 Vc3S01_2219 f712a24dbe43949afd42671c331ab442 334 Pfam PF13377 Periplasmic binding protein-like domain 170 330 9.7E-44 T 12-10-2018 Vc3S01_2219 f712a24dbe43949afd42671c331ab442 334 Hamap MF_01277 HTH-type transcriptional repressor PurR [purR]. 1 334 62.569 T 12-10-2018 IPR023588 Transcription regulator HTH, PurR GO:0006355 Vc3S01_2219 f712a24dbe43949afd42671c331ab442 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 12-10-2018 Vc3S01_2219 f712a24dbe43949afd42671c331ab442 334 Gene3D G3DSA:1.10.260.40 3 59 1.3E-24 T 12-10-2018 Vc3S01_2219 f712a24dbe43949afd42671c331ab442 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.1E-20 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Vc3S01_1255 6909e812453873052dba0d423bc212f4 627 Gene3D G3DSA:3.30.450.20 60 168 1.6E-55 T 12-10-2018 Vc3S01_1255 6909e812453873052dba0d423bc212f4 627 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 427 593 3.3E-39 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Vc3S01_1255 6909e812453873052dba0d423bc212f4 627 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 273 293 5.3E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Vc3S01_1255 6909e812453873052dba0d423bc212f4 627 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 492 521 5.3E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Vc3S01_1255 6909e812453873052dba0d423bc212f4 627 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 463 490 5.3E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Vc3S01_1255 6909e812453873052dba0d423bc212f4 627 Gene3D G3DSA:1.10.287.950 297 627 2.3E-72 T 12-10-2018 Vc3S01_1255 6909e812453873052dba0d423bc212f4 627 SMART SM00304 353 403 5.3 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Vc3S01_1255 6909e812453873052dba0d423bc212f4 627 SMART SM00304 296 350 6.4E-11 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Vc3S01_1255 6909e812453873052dba0d423bc212f4 627 Pfam PF00672 HAMP domain 300 346 3.0E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Vc3S01_1255 6909e812453873052dba0d423bc212f4 627 Gene3D G3DSA:3.30.450.20 49 268 1.6E-55 T 12-10-2018 Vc3S01_1255 6909e812453873052dba0d423bc212f4 627 Pfam PF02743 Cache domain 41 258 4.1E-34 T 12-10-2018 IPR033479 Double Cache domain 1 Vc3S01_1255 6909e812453873052dba0d423bc212f4 627 SUPERFAMILY SSF103190 89 175 4.45E-12 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Vc3S01_1255 6909e812453873052dba0d423bc212f4 627 SUPERFAMILY SSF58104 318 627 5.36E-76 T 12-10-2018 Vc3S01_1255 6909e812453873052dba0d423bc212f4 627 SMART SM00283 365 626 1.3E-63 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Vc3S01_2567 7d000d8d559627996a47b4c1fc2e1969 217 PIRSF PIRSF000498 1 211 2.4E-79 T 12-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Vc3S01_2567 7d000d8d559627996a47b4c1fc2e1969 217 Gene3D G3DSA:2.40.30.20 102 206 1.5E-35 T 12-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Vc3S01_2567 7d000d8d559627996a47b4c1fc2e1969 217 Pfam PF00677 Lumazine binding domain 100 184 9.0E-24 T 12-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Vc3S01_2567 7d000d8d559627996a47b4c1fc2e1969 217 Pfam PF00677 Lumazine binding domain 3 87 4.5E-21 T 12-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Vc3S01_2567 7d000d8d559627996a47b4c1fc2e1969 217 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 202 1.8E-66 T 12-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Vc3S01_2567 7d000d8d559627996a47b4c1fc2e1969 217 SUPERFAMILY SSF63380 93 197 3.66E-33 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Vc3S01_2567 7d000d8d559627996a47b4c1fc2e1969 217 Gene3D G3DSA:2.40.30.20 1 89 9.1E-28 T 12-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Vc3S01_2567 7d000d8d559627996a47b4c1fc2e1969 217 SUPERFAMILY SSF63380 1 89 1.53E-25 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Vc3S01_A0094 d31752f8b1fd5a9734e5be9edc06e455 334 Gene3D G3DSA:3.40.50.2300 160 289 6.4E-85 T 12-10-2018 Vc3S01_A0094 d31752f8b1fd5a9734e5be9edc06e455 334 SUPERFAMILY SSF53822 61 329 3.81E-86 T 12-10-2018 IPR028082 Periplasmic binding protein-like I Vc3S01_A0094 d31752f8b1fd5a9734e5be9edc06e455 334 SUPERFAMILY SSF47413 2 59 3.58E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Vc3S01_A0094 d31752f8b1fd5a9734e5be9edc06e455 334 Gene3D G3DSA:3.40.50.2300 62 307 6.4E-85 T 12-10-2018 Vc3S01_A0094 d31752f8b1fd5a9734e5be9edc06e455 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.3E-18 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Vc3S01_A0094 d31752f8b1fd5a9734e5be9edc06e455 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 6.2E-6 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Vc3S01_A0094 d31752f8b1fd5a9734e5be9edc06e455 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 6.2E-6 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Vc3S01_A0094 d31752f8b1fd5a9734e5be9edc06e455 334 Gene3D G3DSA:1.10.260.40 1 59 1.5E-22 T 12-10-2018 Vc3S01_A0094 d31752f8b1fd5a9734e5be9edc06e455 334 SMART SM00354 1 71 1.1E-28 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Vc3S01_A0094 d31752f8b1fd5a9734e5be9edc06e455 334 Pfam PF13377 Periplasmic binding protein-like domain 168 328 2.8E-36 T 12-10-2018 Vc3S01_2596 ea87526514d07899ab5a6623f7ce8313 294 Hamap MF_00361 NAD kinase [nadK]. 6 289 34.295 T 12-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 Vc3S01_2596 ea87526514d07899ab5a6623f7ce8313 294 SUPERFAMILY SSF111331 8 290 9.68E-94 T 12-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily Vc3S01_2596 ea87526514d07899ab5a6623f7ce8313 294 Pfam PF01513 ATP-NAD kinase 8 273 1.4E-70 T 12-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 Vc3S01_2596 ea87526514d07899ab5a6623f7ce8313 294 Gene3D G3DSA:2.60.200.30 129 266 1.1E-93 T 12-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 Vc3S01_2596 ea87526514d07899ab5a6623f7ce8313 294 Gene3D G3DSA:3.40.50.10330 23 289 1.1E-93 T 12-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 Vc3S01_2660 5bec538ce577553808cdc836b67254dd 311 Pfam PF03466 LysR substrate binding domain 98 302 3.8E-8 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_2660 5bec538ce577553808cdc836b67254dd 311 SUPERFAMILY SSF53850 92 302 3.8E-17 T 12-10-2018 Vc3S01_2660 5bec538ce577553808cdc836b67254dd 311 Gene3D G3DSA:1.10.10.10 1 91 1.9E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_2660 5bec538ce577553808cdc836b67254dd 311 Gene3D G3DSA:3.40.190.10 174 272 2.7E-18 T 12-10-2018 Vc3S01_2660 5bec538ce577553808cdc836b67254dd 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 5.0E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_2660 5bec538ce577553808cdc836b67254dd 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 5.0E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_2660 5bec538ce577553808cdc836b67254dd 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 5.0E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_2660 5bec538ce577553808cdc836b67254dd 311 SUPERFAMILY SSF46785 7 89 8.16E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_2660 5bec538ce577553808cdc836b67254dd 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 70 8.1E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_2660 5bec538ce577553808cdc836b67254dd 311 Gene3D G3DSA:3.40.190.10 93 299 2.7E-18 T 12-10-2018 Vc3S01_A0917 4a89ac436728412133c69ee4c4193b7e 321 PIRSF PIRSF000089 6 321 2.2E-107 T 12-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 Vc3S01_A0917 4a89ac436728412133c69ee4c4193b7e 321 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 265 291 - T 12-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 Vc3S01_A0917 4a89ac436728412133c69ee4c4193b7e 321 SMART SM00893 8 185 4.3E-36 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Vc3S01_A0917 4a89ac436728412133c69ee4c4193b7e 321 Gene3D G3DSA:3.40.50.620 8 194 6.1E-49 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Vc3S01_A0917 4a89ac436728412133c69ee4c4193b7e 321 Pfam PF01012 Electron transfer flavoprotein domain 8 176 1.1E-36 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Vc3S01_A0917 4a89ac436728412133c69ee4c4193b7e 321 SUPERFAMILY SSF52402 8 189 5.37E-46 T 12-10-2018 Vc3S01_A0917 4a89ac436728412133c69ee4c4193b7e 321 SUPERFAMILY SSF52467 199 320 2.99E-49 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Vc3S01_A0917 4a89ac436728412133c69ee4c4193b7e 321 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 202 284 1.3E-36 T 12-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 Vc3S01_A0917 4a89ac436728412133c69ee4c4193b7e 321 Gene3D G3DSA:3.40.50.1220 196 321 3.2E-58 T 12-10-2018 Vc3S01_A0830 9c601be03e4de6b7ac6c8df27a137db3 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 3.6E-12 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Vc3S01_A0830 9c601be03e4de6b7ac6c8df27a137db3 335 Gene3D G3DSA:3.40.50.2300 170 293 2.7E-45 T 12-10-2018 Vc3S01_A0830 9c601be03e4de6b7ac6c8df27a137db3 335 Gene3D G3DSA:3.40.50.2300 86 316 2.7E-45 T 12-10-2018 Vc3S01_A0830 9c601be03e4de6b7ac6c8df27a137db3 335 Gene3D G3DSA:1.10.260.40 2 60 1.2E-12 T 12-10-2018 Vc3S01_A0830 9c601be03e4de6b7ac6c8df27a137db3 335 Pfam PF13377 Periplasmic binding protein-like domain 182 331 6.9E-26 T 12-10-2018 Vc3S01_A0830 9c601be03e4de6b7ac6c8df27a137db3 335 SMART SM00354 1 64 1.7E-6 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Vc3S01_A0830 9c601be03e4de6b7ac6c8df27a137db3 335 SUPERFAMILY SSF53822 79 331 9.42E-48 T 12-10-2018 IPR028082 Periplasmic binding protein-like I Vc3S01_A0830 9c601be03e4de6b7ac6c8df27a137db3 335 SUPERFAMILY SSF47413 3 49 2.97E-9 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Vc3S01_A1474 df4479f04a8d75db1c44faaf5702f2c4 460 SUPERFAMILY SSF58104 203 458 1.22E-58 T 12-10-2018 Vc3S01_A1474 df4479f04a8d75db1c44faaf5702f2c4 460 Gene3D G3DSA:3.30.450.20 1 56 2.1E-6 T 12-10-2018 Vc3S01_A1474 df4479f04a8d75db1c44faaf5702f2c4 460 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 271 424 3.7E-34 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Vc3S01_A1474 df4479f04a8d75db1c44faaf5702f2c4 460 Gene3D G3DSA:1.10.287.950 142 459 3.0E-55 T 12-10-2018 Vc3S01_A1474 df4479f04a8d75db1c44faaf5702f2c4 460 SMART SM00283 197 458 3.9E-46 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Vc3S01_A1474 df4479f04a8d75db1c44faaf5702f2c4 460 SUPERFAMILY SSF55785 3 54 8.55E-8 T 12-10-2018 IPR035965 PAS domain superfamily Vc3S01_2400 932e86da49c7214b67e3f8fd80a3c896 114 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 112 9.1E-35 T 12-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 Vc3S01_2400 932e86da49c7214b67e3f8fd80a3c896 114 SUPERFAMILY SSF81343 4 113 1.06E-25 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Vc3S01_2400 932e86da49c7214b67e3f8fd80a3c896 114 Gene3D G3DSA:1.20.1300.10 1 114 7.9E-28 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Vc3S01_2400 932e86da49c7214b67e3f8fd80a3c896 114 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 10 101 4.4E-6 T 12-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Vc3S01_2400 932e86da49c7214b67e3f8fd80a3c896 114 PIRSF PIRSF000169 1 114 4.4E-38 T 12-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 Vc3S01_2995 16d94c9c2e81a846f0136e0fcce2411f 389 Pfam PF00534 Glycosyl transferases group 1 215 352 3.7E-25 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 Vc3S01_2995 16d94c9c2e81a846f0136e0fcce2411f 389 Gene3D G3DSA:3.40.50.2000 12 385 2.2E-41 T 12-10-2018 Vc3S01_2995 16d94c9c2e81a846f0136e0fcce2411f 389 SUPERFAMILY SSF53756 5 387 2.35E-50 T 12-10-2018 Vc3S01_2995 16d94c9c2e81a846f0136e0fcce2411f 389 Gene3D G3DSA:3.40.50.2000 198 375 2.2E-41 T 12-10-2018 Vc3S01_0708 822cca3a380d6c647c3c8b423542d0c4 519 Pfam PF01266 FAD dependent oxidoreductase 17 335 1.5E-49 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Vc3S01_0708 822cca3a380d6c647c3c8b423542d0c4 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 90 102 1.2E-28 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Vc3S01_0708 822cca3a380d6c647c3c8b423542d0c4 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 325 331 1.2E-28 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Vc3S01_0708 822cca3a380d6c647c3c8b423542d0c4 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 16 28 1.2E-28 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Vc3S01_0708 822cca3a380d6c647c3c8b423542d0c4 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 29 39 1.2E-28 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Vc3S01_0708 822cca3a380d6c647c3c8b423542d0c4 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 359 371 1.2E-28 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Vc3S01_0708 822cca3a380d6c647c3c8b423542d0c4 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 45 57 1.2E-28 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Vc3S01_0708 822cca3a380d6c647c3c8b423542d0c4 519 Gene3D G3DSA:3.30.9.10 94 332 5.3E-142 T 12-10-2018 Vc3S01_0708 822cca3a380d6c647c3c8b423542d0c4 519 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 21 38 - T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Vc3S01_0708 822cca3a380d6c647c3c8b423542d0c4 519 Gene3D G3DSA:1.10.8.870 404 475 4.9E-13 T 12-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Vc3S01_0708 822cca3a380d6c647c3c8b423542d0c4 519 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 393 500 2.5E-9 T 12-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Vc3S01_0708 822cca3a380d6c647c3c8b423542d0c4 519 Gene3D G3DSA:3.50.50.60 17 378 5.3E-142 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_0708 822cca3a380d6c647c3c8b423542d0c4 519 SUPERFAMILY SSF51905 16 384 2.73E-31 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_A1779 fe825ac79ea1cb0114c3b48b68f0f6d4 557 Pfam PF13448 Domain of unknown function (DUF4114) 161 247 7.6E-22 T 12-10-2018 IPR025193 Domain of unknown function DUF4114 Vc3S01_A1779 fe825ac79ea1cb0114c3b48b68f0f6d4 557 TIGRFAM TIGR04456 LruC_dom: LruC domain 290 545 2.2E-78 T 12-10-2018 IPR031025 LruC domain Vc3S01_A1779 fe825ac79ea1cb0114c3b48b68f0f6d4 557 Pfam PF16130 Domain of unknown function (DUF4842) 325 544 4.5E-51 T 12-10-2018 IPR032295 Domain of unknown function DUF4842 Vc3S01_1711 d375729881d4b9ee06368ee5180a9e3d 280 Gene3D G3DSA:3.30.70.270 110 279 2.0E-55 T 12-10-2018 Vc3S01_1711 d375729881d4b9ee06368ee5180a9e3d 280 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 114 275 1.3E-53 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_1711 d375729881d4b9ee06368ee5180a9e3d 280 Gene3D G3DSA:3.30.450.20 1 103 2.5E-18 T 12-10-2018 Vc3S01_1711 d375729881d4b9ee06368ee5180a9e3d 280 Pfam PF00990 Diguanylate cyclase, GGDEF domain 118 273 1.3E-43 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_1711 d375729881d4b9ee06368ee5180a9e3d 280 SMART SM00267 105 277 6.1E-56 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_1711 d375729881d4b9ee06368ee5180a9e3d 280 SUPERFAMILY SSF55073 121 277 4.79E-49 T 12-10-2018 IPR029787 Nucleotide cyclase Vc3S01_3078 ef68ab767675f98c8ee2250256bd755c 848 SMART SM00304 368 421 3.8E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Vc3S01_3078 ef68ab767675f98c8ee2250256bd755c 848 Gene3D G3DSA:1.20.1480.50 330 427 2.8E-8 T 12-10-2018 Vc3S01_3078 ef68ab767675f98c8ee2250256bd755c 848 Pfam PF00563 EAL domain 599 834 1.0E-67 T 12-10-2018 IPR001633 EAL domain Vc3S01_3078 ef68ab767675f98c8ee2250256bd755c 848 SMART SM00267 416 582 6.8E-37 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_3078 ef68ab767675f98c8ee2250256bd755c 848 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 428 577 1.6E-27 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_3078 ef68ab767675f98c8ee2250256bd755c 848 Pfam PF02743 Cache domain 47 327 1.3E-19 T 12-10-2018 IPR033479 Double Cache domain 1 Vc3S01_3078 ef68ab767675f98c8ee2250256bd755c 848 Gene3D G3DSA:3.20.20.450 596 847 1.9E-87 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_3078 ef68ab767675f98c8ee2250256bd755c 848 SUPERFAMILY SSF158472 369 418 6.02E-7 T 12-10-2018 Vc3S01_3078 ef68ab767675f98c8ee2250256bd755c 848 SUPERFAMILY SSF55073 432 584 5.73E-34 T 12-10-2018 IPR029787 Nucleotide cyclase Vc3S01_3078 ef68ab767675f98c8ee2250256bd755c 848 SUPERFAMILY SSF141868 600 846 3.53E-81 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_3078 ef68ab767675f98c8ee2250256bd755c 848 Pfam PF00990 Diguanylate cyclase, GGDEF domain 429 576 1.8E-30 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_3078 ef68ab767675f98c8ee2250256bd755c 848 SMART SM00052 592 839 4.8E-98 T 12-10-2018 IPR001633 EAL domain Vc3S01_3078 ef68ab767675f98c8ee2250256bd755c 848 Gene3D G3DSA:3.30.450.20 127 219 3.6E-12 T 12-10-2018 Vc3S01_3078 ef68ab767675f98c8ee2250256bd755c 848 Gene3D G3DSA:3.30.70.270 428 595 1.8E-38 T 12-10-2018 Vc3S01_A0104 09b96abdb5c6b90b35bbd84065a962f8 544 PIRSF PIRSF002741 4 526 3.7E-89 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Vc3S01_A0104 09b96abdb5c6b90b35bbd84065a962f8 544 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 73 447 2.7E-86 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain Vc3S01_A0104 09b96abdb5c6b90b35bbd84065a962f8 544 SUPERFAMILY SSF53850 25 531 3.08E-115 T 12-10-2018 Vc3S01_A0104 09b96abdb5c6b90b35bbd84065a962f8 544 Gene3D G3DSA:3.90.76.10 59 166 1.3E-165 T 12-10-2018 Vc3S01_A0104 09b96abdb5c6b90b35bbd84065a962f8 544 Gene3D G3DSA:3.40.190.10 42 528 1.3E-165 T 12-10-2018 Vc3S01_A0104 09b96abdb5c6b90b35bbd84065a962f8 544 Gene3D G3DSA:3.10.105.10 267 505 1.3E-165 T 12-10-2018 Vc3S01_2208 983cba5fa7464175c861a83e182d3d4f 521 Pfam PF13193 AMP-binding enzyme C-terminal domain 427 502 9.2E-18 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Vc3S01_2208 983cba5fa7464175c861a83e182d3d4f 521 SUPERFAMILY SSF56801 8 510 4.71E-150 T 12-10-2018 Vc3S01_2208 983cba5fa7464175c861a83e182d3d4f 521 ProSitePatterns PS00455 Putative AMP-binding domain signature. 169 180 - T 12-10-2018 IPR020845 AMP-binding, conserved site Vc3S01_2208 983cba5fa7464175c861a83e182d3d4f 521 Gene3D G3DSA:3.30.300.30 412 512 1.2E-28 T 12-10-2018 Vc3S01_2208 983cba5fa7464175c861a83e182d3d4f 521 Gene3D G3DSA:3.40.50.12780 1 411 5.6E-117 T 12-10-2018 Vc3S01_2208 983cba5fa7464175c861a83e182d3d4f 521 Pfam PF00501 AMP-binding enzyme 8 418 9.3E-107 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Vc3S01_p40111 0646fa2adb39dc26e1ff968761010674 174 SUPERFAMILY SSF53955 2 121 7.29E-11 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily Vc3S01_p40111 0646fa2adb39dc26e1ff968761010674 174 Gene3D G3DSA:1.10.530.10 1 140 1.2E-9 T 12-10-2018 Vc3S01_p40111 0646fa2adb39dc26e1ff968761010674 174 Pfam PF01464 Transglycosylase SLT domain 3 124 2.8E-9 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 Vc3S01_0078 ab01f0f760016e556015714adc425088 437 SUPERFAMILY SSF52540 85 363 4.76E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0078 ab01f0f760016e556015714adc425088 437 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 389 50.63 T 12-10-2018 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 Vc3S01_0078 ab01f0f760016e556015714adc425088 437 Pfam PF00271 Helicase conserved C-terminal domain 243 351 7.2E-30 T 12-10-2018 IPR001650 Helicase, C-terminal Vc3S01_0078 ab01f0f760016e556015714adc425088 437 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 163 171 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site Vc3S01_0078 ab01f0f760016e556015714adc425088 437 Gene3D G3DSA:3.40.50.300 2 222 4.7E-72 T 12-10-2018 Vc3S01_0078 ab01f0f760016e556015714adc425088 437 Pfam PF00270 DEAD/DEAH box helicase 33 207 1.1E-45 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Vc3S01_0078 ab01f0f760016e556015714adc425088 437 SMART SM00490 270 351 5.8E-32 T 12-10-2018 IPR001650 Helicase, C-terminal Vc3S01_0078 ab01f0f760016e556015714adc425088 437 SMART SM00487 28 234 1.7E-54 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Vc3S01_0078 ab01f0f760016e556015714adc425088 437 Gene3D G3DSA:3.40.50.300 229 394 2.7E-45 T 12-10-2018 Vc3S01_A0369 2e649e4542ecd5f967c796d9c735508d 118 Pfam PF02049 Flagellar hook-basal body complex protein FliE 40 118 4.2E-23 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Vc3S01_A0369 2e649e4542ecd5f967c796d9c735508d 118 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 10 117 1.6E-14 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Vc3S01_A0369 2e649e4542ecd5f967c796d9c735508d 118 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 17 118 14.834 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Vc3S01_A0369 2e649e4542ecd5f967c796d9c735508d 118 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 48 64 4.8E-10 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Vc3S01_A0369 2e649e4542ecd5f967c796d9c735508d 118 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 82 98 4.8E-10 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Vc3S01_A0369 2e649e4542ecd5f967c796d9c735508d 118 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 103 116 4.8E-10 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Vc3S01_3102 154eb1f2eb45e4fa20565bb7d8dd1ad6 815 Pfam PF00563 EAL domain 572 807 1.4E-75 T 12-10-2018 IPR001633 EAL domain Vc3S01_3102 154eb1f2eb45e4fa20565bb7d8dd1ad6 815 SMART SM00267 383 556 4.5E-62 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_3102 154eb1f2eb45e4fa20565bb7d8dd1ad6 815 Pfam PF00990 Diguanylate cyclase, GGDEF domain 394 551 4.8E-48 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_3102 154eb1f2eb45e4fa20565bb7d8dd1ad6 815 Gene3D G3DSA:3.20.20.450 570 815 1.0E-99 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_3102 154eb1f2eb45e4fa20565bb7d8dd1ad6 815 SUPERFAMILY SSF55073 399 558 1.88E-47 T 12-10-2018 IPR029787 Nucleotide cyclase Vc3S01_3102 154eb1f2eb45e4fa20565bb7d8dd1ad6 815 SUPERFAMILY SSF141868 572 813 7.72E-89 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_3102 154eb1f2eb45e4fa20565bb7d8dd1ad6 815 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 390 554 2.1E-45 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_3102 154eb1f2eb45e4fa20565bb7d8dd1ad6 815 Pfam PF08448 PAS fold 159 262 1.7E-10 T 12-10-2018 IPR013656 PAS fold-4 Vc3S01_3102 154eb1f2eb45e4fa20565bb7d8dd1ad6 815 PIRSF PIRSF005925 146 275 0.0025 T 12-10-2018 IPR012226 Diguanylate cyclase/phosphodiesterase Vc3S01_3102 154eb1f2eb45e4fa20565bb7d8dd1ad6 815 PIRSF PIRSF005925 262 391 2.6E-13 T 12-10-2018 IPR012226 Diguanylate cyclase/phosphodiesterase Vc3S01_3102 154eb1f2eb45e4fa20565bb7d8dd1ad6 815 PIRSF PIRSF005925 381 815 2.5E-136 T 12-10-2018 IPR012226 Diguanylate cyclase/phosphodiesterase Vc3S01_3102 154eb1f2eb45e4fa20565bb7d8dd1ad6 815 SUPERFAMILY SSF55785 133 256 1.92E-15 T 12-10-2018 IPR035965 PAS domain superfamily Vc3S01_3102 154eb1f2eb45e4fa20565bb7d8dd1ad6 815 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 151 268 5.8E-7 T 12-10-2018 IPR000014 PAS domain Vc3S01_3102 154eb1f2eb45e4fa20565bb7d8dd1ad6 815 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 273 390 1.2E-24 T 12-10-2018 IPR000014 PAS domain Vc3S01_3102 154eb1f2eb45e4fa20565bb7d8dd1ad6 815 SMART SM00086 341 383 7.5E-8 T 12-10-2018 IPR001610 PAC motif Vc3S01_3102 154eb1f2eb45e4fa20565bb7d8dd1ad6 815 SMART SM00086 219 261 7.0 T 12-10-2018 IPR001610 PAC motif Vc3S01_3102 154eb1f2eb45e4fa20565bb7d8dd1ad6 815 Pfam PF00989 PAS fold 273 380 4.2E-19 T 12-10-2018 IPR013767 PAS fold GO:0006355 Vc3S01_3102 154eb1f2eb45e4fa20565bb7d8dd1ad6 815 Gene3D G3DSA:3.30.450.20 269 391 6.9E-37 T 12-10-2018 Vc3S01_3102 154eb1f2eb45e4fa20565bb7d8dd1ad6 815 Gene3D G3DSA:3.30.450.20 140 268 1.9E-18 T 12-10-2018 Vc3S01_3102 154eb1f2eb45e4fa20565bb7d8dd1ad6 815 SMART SM00052 566 812 1.2E-117 T 12-10-2018 IPR001633 EAL domain Vc3S01_3102 154eb1f2eb45e4fa20565bb7d8dd1ad6 815 SUPERFAMILY SSF55785 277 380 2.44E-29 T 12-10-2018 IPR035965 PAS domain superfamily Vc3S01_3102 154eb1f2eb45e4fa20565bb7d8dd1ad6 815 Gene3D G3DSA:3.30.70.270 392 569 6.0E-59 T 12-10-2018 Vc3S01_3102 154eb1f2eb45e4fa20565bb7d8dd1ad6 815 SMART SM00091 146 212 30.0 T 12-10-2018 IPR000014 PAS domain Vc3S01_3102 154eb1f2eb45e4fa20565bb7d8dd1ad6 815 SMART SM00091 269 336 1.4E-8 T 12-10-2018 IPR000014 PAS domain Vc3S01_1592 9c9ce394bbad35a54560d9fed66888c2 305 Pfam PF03466 LysR substrate binding domain 97 295 7.5E-21 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_1592 9c9ce394bbad35a54560d9fed66888c2 305 Gene3D G3DSA:3.40.190.10 170 268 3.2E-43 T 12-10-2018 Vc3S01_1592 9c9ce394bbad35a54560d9fed66888c2 305 Gene3D G3DSA:1.10.10.10 1 88 8.5E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_1592 9c9ce394bbad35a54560d9fed66888c2 305 SUPERFAMILY SSF46785 4 85 1.91E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_1592 9c9ce394bbad35a54560d9fed66888c2 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 8.4E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_1592 9c9ce394bbad35a54560d9fed66888c2 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 8.4E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_1592 9c9ce394bbad35a54560d9fed66888c2 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 8.4E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_1592 9c9ce394bbad35a54560d9fed66888c2 305 SUPERFAMILY SSF53850 89 294 3.98E-36 T 12-10-2018 Vc3S01_1592 9c9ce394bbad35a54560d9fed66888c2 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 62 1.3E-14 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_1592 9c9ce394bbad35a54560d9fed66888c2 305 Gene3D G3DSA:3.40.190.10 89 293 3.2E-43 T 12-10-2018 Vc3S01_2071 5d885d828cde899d55517d110395c7c9 285 Hamap MF_00188 Protease HtpX [htpX]. 1 283 24.322 T 12-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 Vc3S01_2071 5d885d828cde899d55517d110395c7c9 285 Pfam PF01435 Peptidase family M48 74 282 8.1E-40 T 12-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 Vc3S01_2071 5d885d828cde899d55517d110395c7c9 285 Gene3D G3DSA:3.30.2010.10 64 157 4.7E-37 T 12-10-2018 Vc3S01_A1708 39a7dd26adbe4115e91a083bc9d134c8 64 Pfam PF04964 Flp/Fap pilin component 7 51 2.4E-9 T 12-10-2018 IPR007047 Flp/Fap pilin component Vc3S01_1720 31cc2737437c9c64e12097f482727cfd 286 Pfam PF00691 OmpA family 167 261 2.7E-22 T 12-10-2018 IPR006665 OmpA-like domain Vc3S01_1720 31cc2737437c9c64e12097f482727cfd 286 PRINTS PR01021 OMPA domain signature 167 189 9.2E-10 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Vc3S01_1720 31cc2737437c9c64e12097f482727cfd 286 PRINTS PR01021 OMPA domain signature 197 212 9.2E-10 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Vc3S01_1720 31cc2737437c9c64e12097f482727cfd 286 PRINTS PR01021 OMPA domain signature 212 228 9.2E-10 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Vc3S01_1720 31cc2737437c9c64e12097f482727cfd 286 SUPERFAMILY SSF103088 157 267 3.53E-31 T 12-10-2018 IPR036737 OmpA-like domain superfamily Vc3S01_1720 31cc2737437c9c64e12097f482727cfd 286 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 124 143 5.7E-6 T 12-10-2018 Vc3S01_1720 31cc2737437c9c64e12097f482727cfd 286 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 250 270 5.7E-6 T 12-10-2018 Vc3S01_1720 31cc2737437c9c64e12097f482727cfd 286 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 212 229 5.7E-6 T 12-10-2018 Vc3S01_1720 31cc2737437c9c64e12097f482727cfd 286 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 230 249 5.7E-6 T 12-10-2018 Vc3S01_1720 31cc2737437c9c64e12097f482727cfd 286 Gene3D G3DSA:3.30.1330.60 142 277 6.1E-30 T 12-10-2018 IPR036737 OmpA-like domain superfamily Vc3S01_A1832 accff76b71ad1b493478c7aaebe9c409 326 SMART SM00450 113 214 1.1E-22 T 12-10-2018 IPR001763 Rhodanese-like domain Vc3S01_A1832 accff76b71ad1b493478c7aaebe9c409 326 SUPERFAMILY SSF52821 94 240 2.19E-32 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily Vc3S01_A1832 accff76b71ad1b493478c7aaebe9c409 326 Hamap MF_00469 UPF0176 protein YceA [yceA]. 2 254 45.672 T 12-10-2018 IPR020936 Uncharacterised protein family UPF0176 Vc3S01_A1832 accff76b71ad1b493478c7aaebe9c409 326 Pfam PF00581 Rhodanese-like domain 117 210 3.7E-8 T 12-10-2018 IPR001763 Rhodanese-like domain Vc3S01_A1832 accff76b71ad1b493478c7aaebe9c409 326 Gene3D G3DSA:3.40.250.10 97 253 8.8E-52 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily Vc3S01_A1832 accff76b71ad1b493478c7aaebe9c409 326 Gene3D G3DSA:3.30.70.100 1 96 3.6E-34 T 12-10-2018 Vc3S01_0761 31dd4bd56a141d4a8700a15dc8f1a6c4 454 Pfam PF00209 Sodium:neurotransmitter symporter family 155 452 7.0E-26 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Vc3S01_0761 31dd4bd56a141d4a8700a15dc8f1a6c4 454 Pfam PF00209 Sodium:neurotransmitter symporter family 10 133 2.5E-21 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Vc3S01_0761 31dd4bd56a141d4a8700a15dc8f1a6c4 454 SUPERFAMILY SSF161070 10 453 4.18E-118 T 12-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 Vc3S01_0761 31dd4bd56a141d4a8700a15dc8f1a6c4 454 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 18 39 1.3E-10 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Vc3S01_0761 31dd4bd56a141d4a8700a15dc8f1a6c4 454 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 314 333 1.3E-10 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Vc3S01_0761 31dd4bd56a141d4a8700a15dc8f1a6c4 454 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 47 66 1.3E-10 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Vc3S01_A0649 acfd0a69a64b478ad38685ebeb00fa12 125 Pfam PF12680 SnoaL-like domain 8 102 1.7E-11 T 12-10-2018 IPR037401 SnoaL-like domain Vc3S01_A0649 acfd0a69a64b478ad38685ebeb00fa12 125 SUPERFAMILY SSF54427 1 122 3.7E-31 T 12-10-2018 IPR032710 NTF2-like domain superfamily Vc3S01_A0649 acfd0a69a64b478ad38685ebeb00fa12 125 Gene3D G3DSA:3.10.450.50 1 125 2.7E-34 T 12-10-2018 Vc3S01_A0813 b5606229afe795f8dab287de9655ae38 643 Gene3D G3DSA:3.40.50.300 1 211 3.8E-74 T 12-10-2018 Vc3S01_A0813 b5606229afe795f8dab287de9655ae38 643 SMART SM00487 25 223 2.5E-62 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Vc3S01_A0813 b5606229afe795f8dab287de9655ae38 643 Pfam PF00271 Helicase conserved C-terminal domain 232 340 6.7E-30 T 12-10-2018 IPR001650 Helicase, C-terminal Vc3S01_A0813 b5606229afe795f8dab287de9655ae38 643 Pfam PF00270 DEAD/DEAH box helicase 30 195 5.5E-50 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Vc3S01_A0813 b5606229afe795f8dab287de9655ae38 643 Gene3D G3DSA:3.40.50.300 215 434 2.2E-53 T 12-10-2018 Vc3S01_A0813 b5606229afe795f8dab287de9655ae38 643 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 1 547 41.726 T 12-10-2018 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 Vc3S01_A0813 b5606229afe795f8dab287de9655ae38 643 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site Vc3S01_A0813 b5606229afe795f8dab287de9655ae38 643 SMART SM00490 259 340 1.3E-34 T 12-10-2018 IPR001650 Helicase, C-terminal Vc3S01_A0813 b5606229afe795f8dab287de9655ae38 643 Pfam PF03880 DbpA RNA binding domain 475 542 5.8E-16 T 12-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain Vc3S01_A0813 b5606229afe795f8dab287de9655ae38 643 SUPERFAMILY SSF52540 74 361 5.28E-75 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A0813 b5606229afe795f8dab287de9655ae38 643 Gene3D G3DSA:3.30.70.330 476 545 1.4E-9 T 12-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily Vc3S01_A1943 a9e4a84650350b3c77605ef3b18b2b45 199 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 12-10-2018 IPR002178 PTS EIIA type-2 domain Vc3S01_A1943 a9e4a84650350b3c77605ef3b18b2b45 199 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 148 1.7E-35 T 12-10-2018 IPR002178 PTS EIIA type-2 domain Vc3S01_A1943 a9e4a84650350b3c77605ef3b18b2b45 199 Gene3D G3DSA:3.40.930.10 1 151 6.8E-37 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 Vc3S01_A1943 a9e4a84650350b3c77605ef3b18b2b45 199 SUPERFAMILY SSF55804 1 149 1.83E-35 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 Vc3S01_A1943 a9e4a84650350b3c77605ef3b18b2b45 199 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 8 135 2.6E-37 T 12-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 Vc3S01_2525 3e2ff1dcc61e7e00dfe28992cdaaac32 373 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 324 348 - T 12-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Vc3S01_2525 3e2ff1dcc61e7e00dfe28992cdaaac32 373 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 20 367 4.6E-135 T 12-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Vc3S01_2525 3e2ff1dcc61e7e00dfe28992cdaaac32 373 Pfam PF01098 Cell cycle protein 23 367 7.6E-113 T 12-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Vc3S01_2525 3e2ff1dcc61e7e00dfe28992cdaaac32 373 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 16 369 28.181 T 12-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Vc3S01_1596 d2c4f7c0a48c98ad9dcc2f8e76905e6e 517 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 62 77 1.4E-12 T 12-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 Vc3S01_1596 d2c4f7c0a48c98ad9dcc2f8e76905e6e 517 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 118 132 1.4E-12 T 12-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 Vc3S01_1596 d2c4f7c0a48c98ad9dcc2f8e76905e6e 517 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 210 222 1.4E-12 T 12-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 Vc3S01_1596 d2c4f7c0a48c98ad9dcc2f8e76905e6e 517 SMART SM00020 33 260 1.3E-62 T 12-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 Vc3S01_1596 d2c4f7c0a48c98ad9dcc2f8e76905e6e 517 Gene3D G3DSA:2.60.40.10 275 382 1.5E-7 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_1596 d2c4f7c0a48c98ad9dcc2f8e76905e6e 517 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 211 222 - T 12-10-2018 IPR033116 Serine proteases, trypsin family, serine active site Vc3S01_1596 d2c4f7c0a48c98ad9dcc2f8e76905e6e 517 SUPERFAMILY SSF50494 11 265 1.69E-63 T 12-10-2018 IPR009003 Peptidase S1, PA clan Vc3S01_1596 d2c4f7c0a48c98ad9dcc2f8e76905e6e 517 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 72 77 - T 12-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 Vc3S01_1596 d2c4f7c0a48c98ad9dcc2f8e76905e6e 517 Pfam PF00089 Trypsin 34 258 7.3E-52 T 12-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 Vc3S01_1596 d2c4f7c0a48c98ad9dcc2f8e76905e6e 517 SMART SM00495 390 435 3.9E-10 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 Vc3S01_1596 d2c4f7c0a48c98ad9dcc2f8e76905e6e 517 SMART SM00495 462 513 1.0E-8 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 Vc3S01_1596 d2c4f7c0a48c98ad9dcc2f8e76905e6e 517 SUPERFAMILY SSF51055 379 436 3.14E-13 T 12-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 Vc3S01_1596 d2c4f7c0a48c98ad9dcc2f8e76905e6e 517 Gene3D G3DSA:2.40.10.10 46 255 9.9E-62 T 12-10-2018 Vc3S01_1596 d2c4f7c0a48c98ad9dcc2f8e76905e6e 517 Gene3D G3DSA:2.10.10.20 389 433 7.3E-16 T 12-10-2018 Vc3S01_1596 d2c4f7c0a48c98ad9dcc2f8e76905e6e 517 Gene3D G3DSA:2.40.10.10 34 254 9.9E-62 T 12-10-2018 Vc3S01_1596 d2c4f7c0a48c98ad9dcc2f8e76905e6e 517 Gene3D G3DSA:2.10.10.20 457 511 1.0E-5 T 12-10-2018 Vc3S01_A0540 12cd7e3d6d0fbd055dcf105169e568b4 161 Pfam PF03061 Thioesterase superfamily 22 97 8.3E-17 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 Vc3S01_A0540 12cd7e3d6d0fbd055dcf105169e568b4 161 Gene3D G3DSA:3.10.129.10 2 161 7.2E-44 T 12-10-2018 Vc3S01_A0540 12cd7e3d6d0fbd055dcf105169e568b4 161 SUPERFAMILY SSF54637 6 150 3.37E-41 T 12-10-2018 IPR029069 HotDog domain superfamily Vc3S01_2300 3eb9c2b8990e9e971321d97666acf713 366 Gene3D G3DSA:1.10.287.470 90 149 3.4E-68 T 12-10-2018 Vc3S01_2300 3eb9c2b8990e9e971321d97666acf713 366 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 31 336 3.1E-84 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Vc3S01_2300 3eb9c2b8990e9e971321d97666acf713 366 Gene3D G3DSA:2.40.30.170 43 265 3.4E-68 T 12-10-2018 Vc3S01_2300 3eb9c2b8990e9e971321d97666acf713 366 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 41 255 1.1E-27 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Vc3S01_2300 3eb9c2b8990e9e971321d97666acf713 366 Gene3D G3DSA:2.40.50.100 55 183 3.4E-68 T 12-10-2018 Vc3S01_2300 3eb9c2b8990e9e971321d97666acf713 366 Gene3D G3DSA:2.40.420.20 266 334 3.4E-68 T 12-10-2018 Vc3S01_2300 3eb9c2b8990e9e971321d97666acf713 366 SUPERFAMILY SSF111369 45 260 4.58E-37 T 12-10-2018 Vc3S01_3185 0cd5ea1e700eda577943cbd3e05195fb 473 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 274 285 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Vc3S01_3185 0cd5ea1e700eda577943cbd3e05195fb 473 Gene3D G3DSA:3.30.70.20 220 292 3.6E-5 T 12-10-2018 Vc3S01_3185 0cd5ea1e700eda577943cbd3e05195fb 473 Pfam PF13746 4Fe-4S dicluster domain 222 326 2.0E-41 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Vc3S01_3185 0cd5ea1e700eda577943cbd3e05195fb 473 SUPERFAMILY SSF54862 107 336 1.4E-32 T 12-10-2018 Vc3S01_3185 0cd5ea1e700eda577943cbd3e05195fb 473 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 43 471 3.7E-174 T 12-10-2018 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021|GO:0055114 Vc3S01_3185 0cd5ea1e700eda577943cbd3e05195fb 473 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 358 470 1.0E-29 T 12-10-2018 IPR032879 FixG, C-terminal immunoglobulin-like domain Vc3S01_3185 0cd5ea1e700eda577943cbd3e05195fb 473 Pfam PF12801 4Fe-4S binding domain 97 136 2.3E-8 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Vc3S01_3185 0cd5ea1e700eda577943cbd3e05195fb 473 Gene3D G3DSA:2.60.40.10 357 473 4.1E-47 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_A1305 4b57a149c5f218d8aee83b11afc07a40 892 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 309 321 - T 12-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 Vc3S01_A1305 4b57a149c5f218d8aee83b11afc07a40 892 SUPERFAMILY SSF81923 18 125 1.8E-11 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Vc3S01_A1305 4b57a149c5f218d8aee83b11afc07a40 892 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 737 751 2.5E-33 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 Vc3S01_A1305 4b57a149c5f218d8aee83b11afc07a40 892 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 2.5E-33 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 Vc3S01_A1305 4b57a149c5f218d8aee83b11afc07a40 892 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 704 722 2.5E-33 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 Vc3S01_A1305 4b57a149c5f218d8aee83b11afc07a40 892 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 630 648 2.5E-33 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 Vc3S01_A1305 4b57a149c5f218d8aee83b11afc07a40 892 Gene3D G3DSA:1.10.1780.10 1 160 1.6E-36 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Vc3S01_A1305 4b57a149c5f218d8aee83b11afc07a40 892 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 220 348 6.4E-10 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Vc3S01_A1305 4b57a149c5f218d8aee83b11afc07a40 892 Pfam PF07724 AAA domain (Cdc48 subfamily) 626 790 1.1E-43 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Vc3S01_A1305 4b57a149c5f218d8aee83b11afc07a40 892 SMART SM01086 797 887 6.3E-11 T 12-10-2018 IPR019489 Clp ATPase, C-terminal Vc3S01_A1305 4b57a149c5f218d8aee83b11afc07a40 892 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 797 872 3.7E-13 T 12-10-2018 IPR019489 Clp ATPase, C-terminal Vc3S01_A1305 4b57a149c5f218d8aee83b11afc07a40 892 SUPERFAMILY SSF52540 575 876 5.19E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A1305 4b57a149c5f218d8aee83b11afc07a40 892 SUPERFAMILY SSF52540 175 507 1.1E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A1305 4b57a149c5f218d8aee83b11afc07a40 892 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 15 879 0.0 T 12-10-2018 IPR017729 Type VI secretion system, ATPase ClpV1 Vc3S01_A1305 4b57a149c5f218d8aee83b11afc07a40 892 Gene3D G3DSA:3.40.50.300 162 357 9.9E-63 T 12-10-2018 Vc3S01_A1305 4b57a149c5f218d8aee83b11afc07a40 892 Gene3D G3DSA:1.10.8.60 797 890 7.4E-14 T 12-10-2018 Vc3S01_A1305 4b57a149c5f218d8aee83b11afc07a40 892 Gene3D G3DSA:3.40.50.300 359 573 1.6E-48 T 12-10-2018 Vc3S01_A1305 4b57a149c5f218d8aee83b11afc07a40 892 Gene3D G3DSA:3.40.50.300 579 794 1.3E-69 T 12-10-2018 Vc3S01_A1305 4b57a149c5f218d8aee83b11afc07a40 892 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 660 678 - T 12-10-2018 IPR028299 ClpA/B, conserved site 2 Vc3S01_A1305 4b57a149c5f218d8aee83b11afc07a40 892 SMART SM00382 626 785 8.6E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_A1305 4b57a149c5f218d8aee83b11afc07a40 892 SMART SM00382 213 358 3.8E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_0865 148cc96bc3937e1664149bd16074beae 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 5.6E-17 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Vc3S01_0865 148cc96bc3937e1664149bd16074beae 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 5.6E-17 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Vc3S01_0865 148cc96bc3937e1664149bd16074beae 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 5.6E-17 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Vc3S01_0865 148cc96bc3937e1664149bd16074beae 89 PIRSF PIRSF004669 1 89 5.7E-30 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Vc3S01_0865 148cc96bc3937e1664149bd16074beae 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 2.5E-28 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Vc3S01_0865 148cc96bc3937e1664149bd16074beae 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 1.6E-32 T 12-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 Vc3S01_A1775 47534547522edd627a7cf96c2139625b 143 SUPERFAMILY SSF102462 8 143 7.32E-35 T 12-10-2018 IPR023476 Peptidyl-tRNA hydrolase II domain superfamily MetaCyc: PWY-6308 Vc3S01_A1775 47534547522edd627a7cf96c2139625b 143 PIRSF PIRSF033736 3 143 1.0E-28 T 12-10-2018 IPR017021 Uncharacterised conserved protein UCP033763 Vc3S01_A1775 47534547522edd627a7cf96c2139625b 143 Pfam PF09391 Protein of unknown function (DUF2000) 10 143 1.2E-37 T 12-10-2018 IPR018988 Protein of unknown function DUF2000 Vc3S01_A1775 47534547522edd627a7cf96c2139625b 143 Gene3D G3DSA:3.40.1490.10 8 142 4.3E-15 T 12-10-2018 IPR023476 Peptidyl-tRNA hydrolase II domain superfamily MetaCyc: PWY-6308 Vc3S01_A0981 4faa2bc731aba9603cd2c178258b4ef9 161 Pfam PF12688 Tetratrico peptide repeat 40 157 5.5E-14 T 12-10-2018 Vc3S01_A0981 4faa2bc731aba9603cd2c178258b4ef9 161 Gene3D G3DSA:1.25.40.10 52 155 5.6E-22 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_A0981 4faa2bc731aba9603cd2c178258b4ef9 161 SMART SM00028 36 70 38.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_A0981 4faa2bc731aba9603cd2c178258b4ef9 161 SMART SM00028 73 106 8.7E-4 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_A0981 4faa2bc731aba9603cd2c178258b4ef9 161 SUPERFAMILY SSF48452 4 153 1.1E-18 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_1733 6fec6dac0241c03b66f7fdd0064ed757 398 Pfam PF13641 Glycosyltransferase like family 2 60 280 4.6E-16 T 12-10-2018 Vc3S01_1733 6fec6dac0241c03b66f7fdd0064ed757 398 Gene3D G3DSA:3.90.550.10 37 276 1.7E-21 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Vc3S01_1733 6fec6dac0241c03b66f7fdd0064ed757 398 SUPERFAMILY SSF53448 56 324 3.09E-34 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Vc3S01_3087 3c0e798f34eb8e8fddcdfe4407e14bb2 930 SMART SM00482 687 894 9.9E-116 T 12-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Vc3S01_3087 3c0e798f34eb8e8fddcdfe4407e14bb2 930 Gene3D G3DSA:1.20.1060.10 544 659 1.1E-43 T 12-10-2018 Vc3S01_3087 3c0e798f34eb8e8fddcdfe4407e14bb2 930 Gene3D G3DSA:1.10.150.20 174 253 1.4E-94 T 12-10-2018 Vc3S01_3087 3c0e798f34eb8e8fddcdfe4407e14bb2 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 814 825 1.0E-77 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Vc3S01_3087 3c0e798f34eb8e8fddcdfe4407e14bb2 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 846 862 1.0E-77 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Vc3S01_3087 3c0e798f34eb8e8fddcdfe4407e14bb2 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 656 678 1.0E-77 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Vc3S01_3087 3c0e798f34eb8e8fddcdfe4407e14bb2 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 731 744 1.0E-77 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Vc3S01_3087 3c0e798f34eb8e8fddcdfe4407e14bb2 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 701 724 1.0E-77 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Vc3S01_3087 3c0e798f34eb8e8fddcdfe4407e14bb2 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 755 780 1.0E-77 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Vc3S01_3087 3c0e798f34eb8e8fddcdfe4407e14bb2 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 679 694 1.0E-77 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Vc3S01_3087 3c0e798f34eb8e8fddcdfe4407e14bb2 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 792 803 1.0E-77 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Vc3S01_3087 3c0e798f34eb8e8fddcdfe4407e14bb2 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 877 890 1.0E-77 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Vc3S01_3087 3c0e798f34eb8e8fddcdfe4407e14bb2 930 Gene3D G3DSA:3.30.70.370 665 926 1.2E-113 T 12-10-2018 Vc3S01_3087 3c0e798f34eb8e8fddcdfe4407e14bb2 930 SMART SM00474 331 518 6.5E-42 T 12-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 Vc3S01_3087 3c0e798f34eb8e8fddcdfe4407e14bb2 930 Pfam PF01612 3'-5' exonuclease 331 515 1.8E-38 T 12-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 Vc3S01_3087 3c0e798f34eb8e8fddcdfe4407e14bb2 930 Gene3D G3DSA:3.40.50.1010 9 284 1.4E-94 T 12-10-2018 Vc3S01_3087 3c0e798f34eb8e8fddcdfe4407e14bb2 930 Pfam PF00476 DNA polymerase family A 552 927 2.6E-157 T 12-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Vc3S01_3087 3c0e798f34eb8e8fddcdfe4407e14bb2 930 SUPERFAMILY SSF47807 171 291 1.15E-29 T 12-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily Vc3S01_3087 3c0e798f34eb8e8fddcdfe4407e14bb2 930 SUPERFAMILY SSF56672 523 930 3.67E-160 T 12-10-2018 Vc3S01_3087 3c0e798f34eb8e8fddcdfe4407e14bb2 930 ProSitePatterns PS00447 DNA polymerase family A signature. 755 774 - T 12-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Vc3S01_3087 3c0e798f34eb8e8fddcdfe4407e14bb2 930 Gene3D G3DSA:3.30.420.10 328 543 1.2E-69 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Vc3S01_3087 3c0e798f34eb8e8fddcdfe4407e14bb2 930 SUPERFAMILY SSF88723 7 170 1.18E-58 T 12-10-2018 IPR029060 PIN-like domain superfamily Vc3S01_3087 3c0e798f34eb8e8fddcdfe4407e14bb2 930 TIGRFAM TIGR00593 pola: DNA polymerase I 9 930 3.5E-285 T 12-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Vc3S01_3087 3c0e798f34eb8e8fddcdfe4407e14bb2 930 SUPERFAMILY SSF53098 334 519 9.28E-55 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Vc3S01_3087 3c0e798f34eb8e8fddcdfe4407e14bb2 930 SMART SM00279 173 208 1.2E-13 T 12-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 Vc3S01_3087 3c0e798f34eb8e8fddcdfe4407e14bb2 930 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 171 268 2.5E-28 T 12-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 Vc3S01_3087 3c0e798f34eb8e8fddcdfe4407e14bb2 930 Gene3D G3DSA:1.10.150.20 710 853 1.2E-113 T 12-10-2018 Vc3S01_3087 3c0e798f34eb8e8fddcdfe4407e14bb2 930 SMART SM00475 7 267 1.3E-122 T 12-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 Vc3S01_3087 3c0e798f34eb8e8fddcdfe4407e14bb2 930 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 170 1.9E-54 T 12-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 Vc3S01_A1539 a88cb62e622b300ea2ac82441bf8cf91 287 Pfam PF01418 Helix-turn-helix domain, rpiR family 7 78 7.7E-16 T 12-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 Vc3S01_A1539 a88cb62e622b300ea2ac82441bf8cf91 287 Gene3D G3DSA:1.10.10.10 3 82 3.4E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A1539 a88cb62e622b300ea2ac82441bf8cf91 287 SUPERFAMILY SSF53697 97 260 2.23E-37 T 12-10-2018 Vc3S01_A1539 a88cb62e622b300ea2ac82441bf8cf91 287 Pfam PF01380 SIS domain 124 250 2.1E-18 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Vc3S01_A1539 a88cb62e622b300ea2ac82441bf8cf91 287 Gene3D G3DSA:3.40.50.10490 94 273 2.0E-40 T 12-10-2018 Vc3S01_A1539 a88cb62e622b300ea2ac82441bf8cf91 287 SUPERFAMILY SSF46689 5 79 1.15E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_1501 98c65e89d0fa6ddfe68597ec7c51f21f 103 SUPERFAMILY SSF51182 4 102 5.41E-24 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily Vc3S01_1501 98c65e89d0fa6ddfe68597ec7c51f21f 103 Pfam PF06339 Ectoine synthase 1 102 4.3E-49 T 12-10-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108 Vc3S01_1501 98c65e89d0fa6ddfe68597ec7c51f21f 103 Gene3D G3DSA:2.60.120.10 1 91 1.4E-34 T 12-10-2018 IPR014710 RmlC-like jelly roll fold Vc3S01_1501 98c65e89d0fa6ddfe68597ec7c51f21f 103 ProDom PD080544 SYNTHASE 4.2.1.- LYASE L-ECTOINE DEHYDRATASE N-ACETYLDIAMINOBUTYRATE ECTOINE ENZYME SYNTHASE:ECTOINE ECTC 1 93 5.0E-43 T 12-10-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108 Vc3S01_1037 9261aeeaba67c8cdbe16350385a643f3 348 Hamap MF_00462 Ion-translocating oxidoreductase complex subunit D [rsxD]. 3 348 27.154 T 12-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 Vc3S01_1037 9261aeeaba67c8cdbe16350385a643f3 348 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 8 348 4.9E-139 T 12-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 Vc3S01_1037 9261aeeaba67c8cdbe16350385a643f3 348 Pfam PF03116 NQR2, RnfD, RnfE family 6 347 2.1E-105 T 12-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 Vc3S01_2223 9cefb8a52b6c564c98ce98cdead9faeb 267 SUPERFAMILY SSF53474 11 261 4.13E-45 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_2223 9cefb8a52b6c564c98ce98cdead9faeb 267 PRINTS PR00412 Epoxide hydrolase signature 24 42 2.7E-5 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Vc3S01_2223 9cefb8a52b6c564c98ce98cdead9faeb 267 PRINTS PR00412 Epoxide hydrolase signature 237 259 2.7E-5 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Vc3S01_2223 9cefb8a52b6c564c98ce98cdead9faeb 267 PRINTS PR00412 Epoxide hydrolase signature 205 221 2.7E-5 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Vc3S01_2223 9cefb8a52b6c564c98ce98cdead9faeb 267 Gene3D G3DSA:3.40.50.1820 7 264 4.8E-42 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_2223 9cefb8a52b6c564c98ce98cdead9faeb 267 Pfam PF00561 alpha/beta hydrolase fold 19 121 4.6E-23 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Vc3S01_0754 202eb1f0f813fbc95c31ea86ec72c54a 77 Pfam PF04400 (Na+)-NQR maturation NqrM 22 62 3.9E-21 T 12-10-2018 IPR007495 (Na+)-NQR maturation factor NqrM Vc3S01_0524 2e07244f2587fc9dfe1135f3de529b84 433 Gene3D G3DSA:3.20.20.120 128 433 7.6E-132 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Vc3S01_0524 2e07244f2587fc9dfe1135f3de529b84 433 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 429 1.1E-205 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Vc3S01_0524 2e07244f2587fc9dfe1135f3de529b84 433 ProSitePatterns PS00164 Enolase signature. 340 353 - T 12-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Vc3S01_0524 2e07244f2587fc9dfe1135f3de529b84 433 Pfam PF03952 Enolase, N-terminal domain 4 134 1.8E-58 T 12-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Vc3S01_0524 2e07244f2587fc9dfe1135f3de529b84 433 SMART SM01192 143 431 3.7E-212 T 12-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Vc3S01_0524 2e07244f2587fc9dfe1135f3de529b84 433 Gene3D G3DSA:3.30.390.10 1 127 3.3E-55 T 12-10-2018 IPR029017 Enolase-like, N-terminal Vc3S01_0524 2e07244f2587fc9dfe1135f3de529b84 433 PIRSF PIRSF001400 1 431 2.1E-191 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Vc3S01_0524 2e07244f2587fc9dfe1135f3de529b84 433 SUPERFAMILY SSF54826 3 138 1.79E-56 T 12-10-2018 Vc3S01_0524 2e07244f2587fc9dfe1135f3de529b84 433 SUPERFAMILY SSF51604 143 428 1.26E-125 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Vc3S01_0524 2e07244f2587fc9dfe1135f3de529b84 433 Hamap MF_00318 Enolase [eno]. 2 417 44.327 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Vc3S01_0524 2e07244f2587fc9dfe1135f3de529b84 433 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 430 7.6E-136 T 12-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Vc3S01_0524 2e07244f2587fc9dfe1135f3de529b84 433 SMART SM01193 4 134 1.3E-92 T 12-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Vc3S01_0524 2e07244f2587fc9dfe1135f3de529b84 433 PRINTS PR00148 Enolase signature 369 386 4.0E-44 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Vc3S01_0524 2e07244f2587fc9dfe1135f3de529b84 433 PRINTS PR00148 Enolase signature 317 328 4.0E-44 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Vc3S01_0524 2e07244f2587fc9dfe1135f3de529b84 433 PRINTS PR00148 Enolase signature 165 178 4.0E-44 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Vc3S01_0524 2e07244f2587fc9dfe1135f3de529b84 433 PRINTS PR00148 Enolase signature 340 354 4.0E-44 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Vc3S01_0524 2e07244f2587fc9dfe1135f3de529b84 433 PRINTS PR00148 Enolase signature 37 51 4.0E-44 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Vc3S01_0524 2e07244f2587fc9dfe1135f3de529b84 433 PRINTS PR00148 Enolase signature 107 123 4.0E-44 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Vc3S01_3195 5673ad36227857b76642eb532dbf14b4 312 Gene3D G3DSA:3.30.470.10 10 127 5.0E-106 T 12-10-2018 Vc3S01_3195 5673ad36227857b76642eb532dbf14b4 312 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 10 307 1.0E-141 T 12-10-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 Vc3S01_3195 5673ad36227857b76642eb532dbf14b4 312 SUPERFAMILY SSF56752 7 307 9.68E-103 T 12-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 Vc3S01_3195 5673ad36227857b76642eb532dbf14b4 312 Gene3D G3DSA:3.20.10.10 138 289 5.0E-106 T 12-10-2018 Vc3S01_3195 5673ad36227857b76642eb532dbf14b4 312 ProSitePatterns PS00770 Aminotransferases class-IV signature. 194 223 - T 12-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 Vc3S01_3195 5673ad36227857b76642eb532dbf14b4 312 Pfam PF01063 Amino-transferase class IV 36 268 2.2E-45 T 12-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 Vc3S01_A1496 d988a6c24f7dc52560956b66078d6291 279 SUPERFAMILY SSF103481 178 275 7.19E-9 T 12-10-2018 Vc3S01_A1496 d988a6c24f7dc52560956b66078d6291 279 SUPERFAMILY SSF103481 33 131 3.01E-8 T 12-10-2018 Vc3S01_A1496 d988a6c24f7dc52560956b66078d6291 279 Pfam PF00892 EamA-like transporter family 140 271 4.2E-9 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Vc3S01_1285 864c2ccc21e5351b353385dbedc186c1 194 Gene3D G3DSA:3.40.630.30 14 190 1.5E-45 T 12-10-2018 Vc3S01_1285 864c2ccc21e5351b353385dbedc186c1 194 SUPERFAMILY SSF55729 14 185 1.83E-39 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_1285 864c2ccc21e5351b353385dbedc186c1 194 Pfam PF13302 Acetyltransferase (GNAT) domain 17 161 4.6E-18 T 12-10-2018 IPR000182 GNAT domain Vc3S01_A1003 8a4b396a9b761687c6259f2711a2fd59 297 Gene3D G3DSA:3.40.190.290 95 295 4.0E-39 T 12-10-2018 Vc3S01_A1003 8a4b396a9b761687c6259f2711a2fd59 297 Pfam PF03466 LysR substrate binding domain 94 295 8.1E-26 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_A1003 8a4b396a9b761687c6259f2711a2fd59 297 SUPERFAMILY SSF46785 6 91 1.59E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A1003 8a4b396a9b761687c6259f2711a2fd59 297 Gene3D G3DSA:1.10.10.10 7 92 4.2E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A1003 8a4b396a9b761687c6259f2711a2fd59 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 6.0E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A1003 8a4b396a9b761687c6259f2711a2fd59 297 SUPERFAMILY SSF53850 94 296 1.03E-25 T 12-10-2018 Vc3S01_A1813 5d1089eddffea04ca0df46d317c33595 283 Pfam PF00892 EamA-like transporter family 4 135 1.2E-6 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Vc3S01_A1813 5d1089eddffea04ca0df46d317c33595 283 Pfam PF00892 EamA-like transporter family 145 275 4.5E-15 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Vc3S01_A1813 5d1089eddffea04ca0df46d317c33595 283 SUPERFAMILY SSF103481 184 279 1.44E-12 T 12-10-2018 Vc3S01_A1813 5d1089eddffea04ca0df46d317c33595 283 SUPERFAMILY SSF103481 38 139 1.15E-7 T 12-10-2018 Vc3S01_2054 ae6ebf5d548ac1edc27067fdcb84932c 298 Pfam PF08029 HisG, C-terminal domain 222 295 2.0E-24 T 12-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 Vc3S01_2054 ae6ebf5d548ac1edc27067fdcb84932c 298 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 204 297 2.3E-30 T 12-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 Vc3S01_2054 ae6ebf5d548ac1edc27067fdcb84932c 298 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 5 298 35.188 T 12-10-2018 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 Vc3S01_2054 ae6ebf5d548ac1edc27067fdcb84932c 298 SUPERFAMILY SSF53850 5 222 5.61E-66 T 12-10-2018 Vc3S01_2054 ae6ebf5d548ac1edc27067fdcb84932c 298 Gene3D G3DSA:3.40.190.10 102 191 6.2E-68 T 12-10-2018 Vc3S01_2054 ae6ebf5d548ac1edc27067fdcb84932c 298 SUPERFAMILY SSF54913 225 297 2.78E-21 T 12-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Vc3S01_2054 ae6ebf5d548ac1edc27067fdcb84932c 298 Gene3D G3DSA:3.40.190.10 6 219 6.2E-68 T 12-10-2018 Vc3S01_2054 ae6ebf5d548ac1edc27067fdcb84932c 298 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 6 196 2.2E-54 T 12-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 Vc3S01_2054 ae6ebf5d548ac1edc27067fdcb84932c 298 Gene3D G3DSA:3.30.70.120 225 298 6.0E-34 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Vc3S01_2054 ae6ebf5d548ac1edc27067fdcb84932c 298 Pfam PF01634 ATP phosphoribosyltransferase 53 218 1.0E-43 T 12-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 Vc3S01_2054 ae6ebf5d548ac1edc27067fdcb84932c 298 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 155 176 - T 12-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 Vc3S01_A0713 8dc080f465211423b09c820a32851ba0 104 ProDom PD030876 UPF0265 YEEX HELIX ALPHA BFL460 UNCHARACTERIZED FN0411 HI1168 VPA1226 BCR 1 92 7.0E-45 T 12-10-2018 IPR007458 Protein of unknown function DUF496 Vc3S01_A0713 8dc080f465211423b09c820a32851ba0 104 Hamap MF_00683 UPF0265 protein YeeX [yeeX]. 1 95 23.937 T 12-10-2018 IPR007458 Protein of unknown function DUF496 Vc3S01_A0713 8dc080f465211423b09c820a32851ba0 104 PIRSF PIRSF028773 1 104 1.4E-45 T 12-10-2018 IPR007458 Protein of unknown function DUF496 Vc3S01_A0713 8dc080f465211423b09c820a32851ba0 104 Pfam PF04363 Protein of unknown function (DUF496) 1 92 7.1E-42 T 12-10-2018 IPR007458 Protein of unknown function DUF496 Vc3S01_3152 2519ea2aeae8042a0f36756eff9fb3d0 241 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 209 1.7E-22 T 12-10-2018 Vc3S01_3152 2519ea2aeae8042a0f36756eff9fb3d0 241 Gene3D G3DSA:1.20.120.710 15 109 4.4E-60 T 12-10-2018 Vc3S01_3152 2519ea2aeae8042a0f36756eff9fb3d0 241 Gene3D G3DSA:3.40.50.1000 3 232 4.4E-60 T 12-10-2018 IPR023214 HAD superfamily Vc3S01_3152 2519ea2aeae8042a0f36756eff9fb3d0 241 SUPERFAMILY SSF56784 3 237 5.02E-43 T 12-10-2018 IPR036412 HAD-like superfamily Vc3S01_3152 2519ea2aeae8042a0f36756eff9fb3d0 241 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 92 209 2.3E-10 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Vc3S01_3152 2519ea2aeae8042a0f36756eff9fb3d0 241 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 111 203 6.9E-11 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Vc3S01_1852 49d18522a23d05a570f378fdc6dd1c7a 295 TIGRFAM TIGR01355 cyt_deam_dimer: cytidine deaminase 29 292 3.3E-99 T 12-10-2018 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 Vc3S01_1852 49d18522a23d05a570f378fdc6dd1c7a 295 Pfam PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region 157 277 1.8E-41 T 12-10-2018 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 Vc3S01_1852 49d18522a23d05a570f378fdc6dd1c7a 295 Gene3D G3DSA:3.40.140.10 180 295 2.0E-26 T 12-10-2018 Vc3S01_1852 49d18522a23d05a570f378fdc6dd1c7a 295 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 102 136 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 Vc3S01_1852 49d18522a23d05a570f378fdc6dd1c7a 295 SUPERFAMILY SSF53927 1 147 4.68E-41 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Vc3S01_1852 49d18522a23d05a570f378fdc6dd1c7a 295 SUPERFAMILY SSF53927 152 287 1.17E-36 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Vc3S01_1852 49d18522a23d05a570f378fdc6dd1c7a 295 Hamap MF_01558 Cytidine deaminase [cdd]. 1 293 49.251 T 12-10-2018 IPR020797 Cytidine deaminase, bacteria GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 Vc3S01_1852 49d18522a23d05a570f378fdc6dd1c7a 295 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 64 142 7.3E-12 T 12-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain Vc3S01_1852 49d18522a23d05a570f378fdc6dd1c7a 295 PIRSF PIRSF006334 14 295 2.4E-108 T 12-10-2018 Vc3S01_1852 49d18522a23d05a570f378fdc6dd1c7a 295 Gene3D G3DSA:3.40.140.10 29 179 2.0E-43 T 12-10-2018 Vc3S01_0272 6809bd4bfd7d82ee19f79cceff39dc72 263 SMART SM01150 3 262 3.7E-119 T 12-10-2018 IPR009770 Domain of unknown function DUF1338 Vc3S01_0272 6809bd4bfd7d82ee19f79cceff39dc72 263 Gene3D G3DSA:3.10.180.50 3 239 3.4E-94 T 12-10-2018 Vc3S01_0272 6809bd4bfd7d82ee19f79cceff39dc72 263 Pfam PF07063 Domain of unknown function (DUF1338) 31 116 1.3E-19 T 12-10-2018 IPR009770 Domain of unknown function DUF1338 Vc3S01_0272 6809bd4bfd7d82ee19f79cceff39dc72 263 Pfam PF07063 Domain of unknown function (DUF1338) 136 261 6.3E-27 T 12-10-2018 IPR009770 Domain of unknown function DUF1338 Vc3S01_1059 c6d9230a5429bb42ed7edc8f8caa7179 323 Gene3D G3DSA:3.40.50.300 1 321 1.7E-97 T 12-10-2018 Vc3S01_1059 c6d9230a5429bb42ed7edc8f8caa7179 323 SMART SM00382 32 238 5.4E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_1059 c6d9230a5429bb42ed7edc8f8caa7179 323 Pfam PF00005 ABC transporter 24 180 3.0E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_1059 c6d9230a5429bb42ed7edc8f8caa7179 323 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_1059 c6d9230a5429bb42ed7edc8f8caa7179 323 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 315 6.2E-24 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Vc3S01_1059 c6d9230a5429bb42ed7edc8f8caa7179 323 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 232 296 4.1E-18 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Vc3S01_1059 c6d9230a5429bb42ed7edc8f8caa7179 323 SUPERFAMILY SSF52540 31 301 1.05E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A0650 143ef7831d4d7054fa9ec7c3a90d6bbb 304 SUPERFAMILY SSF46785 3 84 5.23E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A0650 143ef7831d4d7054fa9ec7c3a90d6bbb 304 SUPERFAMILY SSF53850 88 295 6.88E-38 T 12-10-2018 Vc3S01_A0650 143ef7831d4d7054fa9ec7c3a90d6bbb 304 Gene3D G3DSA:3.40.190.10 168 267 4.3E-46 T 12-10-2018 Vc3S01_A0650 143ef7831d4d7054fa9ec7c3a90d6bbb 304 Gene3D G3DSA:3.40.190.10 95 290 4.3E-46 T 12-10-2018 Vc3S01_A0650 143ef7831d4d7054fa9ec7c3a90d6bbb 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 2.9E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A0650 143ef7831d4d7054fa9ec7c3a90d6bbb 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 2.9E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A0650 143ef7831d4d7054fa9ec7c3a90d6bbb 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.9E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A0650 143ef7831d4d7054fa9ec7c3a90d6bbb 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 1.8E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A0650 143ef7831d4d7054fa9ec7c3a90d6bbb 304 Gene3D G3DSA:1.10.10.10 1 86 3.2E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A0650 143ef7831d4d7054fa9ec7c3a90d6bbb 304 Pfam PF03466 LysR substrate binding domain 92 296 3.3E-22 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_1861 f688e16f1d683c87a2c7903b928b8c5a 314 Gene3D G3DSA:1.10.3470.10 1 314 7.7E-65 T 12-10-2018 IPR037294 ABC transporter, BtuC-like Vc3S01_1861 f688e16f1d683c87a2c7903b928b8c5a 314 SUPERFAMILY SSF81345 5 310 1.22E-66 T 12-10-2018 IPR037294 ABC transporter, BtuC-like Vc3S01_1861 f688e16f1d683c87a2c7903b928b8c5a 314 Pfam PF01032 FecCD transport family 10 310 3.3E-67 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Vc3S01_p30043 83737e01d961634952948c90f1825dee 233 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 73 179 2.0E-14 T 12-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain Vc3S01_p30043 83737e01d961634952948c90f1825dee 233 Gene3D G3DSA:3.40.140.10 68 230 2.4E-26 T 12-10-2018 Vc3S01_p30043 83737e01d961634952948c90f1825dee 233 SUPERFAMILY SSF53927 76 183 2.41E-19 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Vc3S01_2565 dbc986f5d8ed8f1ce7f85f0b82388405 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 150 2.4E-55 T 12-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Vc3S01_2565 dbc986f5d8ed8f1ce7f85f0b82388405 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 151 9.7E-58 T 12-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Vc3S01_2565 dbc986f5d8ed8f1ce7f85f0b82388405 156 SUPERFAMILY SSF52121 4 154 4.58E-61 T 12-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Vc3S01_2565 dbc986f5d8ed8f1ce7f85f0b82388405 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 154 31.315 T 12-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Vc3S01_2565 dbc986f5d8ed8f1ce7f85f0b82388405 156 Gene3D G3DSA:3.40.50.960 1 156 1.9E-64 T 12-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Vc3S01_A0344 c9b9ecedbf0f7a7bda1e95d827b6a70c 235 Pfam PF02567 Phenazine biosynthesis-like protein 1 203 1.5E-34 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 Vc3S01_A0344 c9b9ecedbf0f7a7bda1e95d827b6a70c 235 PIRSF PIRSF016184 1 234 5.3E-40 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 Vc3S01_A0344 c9b9ecedbf0f7a7bda1e95d827b6a70c 235 Gene3D G3DSA:3.10.310.10 92 228 1.2E-56 T 12-10-2018 Vc3S01_A0344 c9b9ecedbf0f7a7bda1e95d827b6a70c 235 Gene3D G3DSA:3.10.310.10 1 231 1.2E-56 T 12-10-2018 Vc3S01_A0344 c9b9ecedbf0f7a7bda1e95d827b6a70c 235 SUPERFAMILY SSF54506 1 231 4.19E-46 T 12-10-2018 Vc3S01_2489 eb08c67f6b36a91fd93a840eeb6adae8 898 Pfam PF00702 haloacid dehalogenase-like hydrolase 581 797 1.1E-49 T 12-10-2018 Vc3S01_2489 eb08c67f6b36a91fd93a840eeb6adae8 898 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 587 593 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Vc3S01_2489 eb08c67f6b36a91fd93a840eeb6adae8 898 Gene3D G3DSA:3.40.50.1000 566 835 6.0E-95 T 12-10-2018 IPR023214 HAD superfamily Vc3S01_2489 eb08c67f6b36a91fd93a840eeb6adae8 898 Pfam PF00122 E1-E2 ATPase 384 564 9.1E-49 T 12-10-2018 Vc3S01_2489 eb08c67f6b36a91fd93a840eeb6adae8 898 ProSitePatterns PS01047 Heavy-metal-associated domain. 164 193 - T 12-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 Vc3S01_2489 eb08c67f6b36a91fd93a840eeb6adae8 898 SUPERFAMILY SSF81665 350 850 9.29E-10 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Vc3S01_2489 eb08c67f6b36a91fd93a840eeb6adae8 898 ProSitePatterns PS01229 Hypothetical cof family signature 2. 783 805 - T 12-10-2018 Vc3S01_2489 eb08c67f6b36a91fd93a840eeb6adae8 898 Gene3D G3DSA:3.30.70.100 1 65 2.1E-7 T 12-10-2018 Vc3S01_2489 eb08c67f6b36a91fd93a840eeb6adae8 898 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 316 892 1.8E-183 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Vc3S01_2489 eb08c67f6b36a91fd93a840eeb6adae8 898 PRINTS PR00943 Copper-transporting ATPase signature 301 320 3.5E-12 T 12-10-2018 Vc3S01_2489 eb08c67f6b36a91fd93a840eeb6adae8 898 PRINTS PR00943 Copper-transporting ATPase signature 760 777 3.5E-12 T 12-10-2018 Vc3S01_2489 eb08c67f6b36a91fd93a840eeb6adae8 898 PRINTS PR00943 Copper-transporting ATPase signature 174 188 3.5E-12 T 12-10-2018 Vc3S01_2489 eb08c67f6b36a91fd93a840eeb6adae8 898 PRINTS PR00943 Copper-transporting ATPase signature 856 870 3.5E-12 T 12-10-2018 Vc3S01_2489 eb08c67f6b36a91fd93a840eeb6adae8 898 PRINTS PR00943 Copper-transporting ATPase signature 506 520 3.5E-12 T 12-10-2018 Vc3S01_2489 eb08c67f6b36a91fd93a840eeb6adae8 898 PRINTS PR00943 Copper-transporting ATPase signature 568 583 3.5E-12 T 12-10-2018 Vc3S01_2489 eb08c67f6b36a91fd93a840eeb6adae8 898 PRINTS PR00943 Copper-transporting ATPase signature 373 391 3.5E-12 T 12-10-2018 Vc3S01_2489 eb08c67f6b36a91fd93a840eeb6adae8 898 Gene3D G3DSA:3.40.1110.10 596 715 6.0E-95 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Vc3S01_2489 eb08c67f6b36a91fd93a840eeb6adae8 898 Gene3D G3DSA:3.30.70.100 160 228 7.1E-19 T 12-10-2018 Vc3S01_2489 eb08c67f6b36a91fd93a840eeb6adae8 898 SUPERFAMILY SSF81653 386 483 3.4E-25 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Vc3S01_2489 eb08c67f6b36a91fd93a840eeb6adae8 898 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 708 719 5.0E-28 T 12-10-2018 Vc3S01_2489 eb08c67f6b36a91fd93a840eeb6adae8 898 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 806 818 5.0E-28 T 12-10-2018 Vc3S01_2489 eb08c67f6b36a91fd93a840eeb6adae8 898 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 433 447 5.0E-28 T 12-10-2018 Vc3S01_2489 eb08c67f6b36a91fd93a840eeb6adae8 898 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 585 599 5.0E-28 T 12-10-2018 Vc3S01_2489 eb08c67f6b36a91fd93a840eeb6adae8 898 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 730 740 5.0E-28 T 12-10-2018 Vc3S01_2489 eb08c67f6b36a91fd93a840eeb6adae8 898 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 783 802 5.0E-28 T 12-10-2018 Vc3S01_2489 eb08c67f6b36a91fd93a840eeb6adae8 898 Pfam PF00403 Heavy-metal-associated domain 6 61 5.6E-7 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Vc3S01_2489 eb08c67f6b36a91fd93a840eeb6adae8 898 Pfam PF00403 Heavy-metal-associated domain 164 223 1.3E-12 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Vc3S01_2489 eb08c67f6b36a91fd93a840eeb6adae8 898 Gene3D G3DSA:2.70.150.20 371 487 3.0E-36 T 12-10-2018 Vc3S01_2489 eb08c67f6b36a91fd93a840eeb6adae8 898 SUPERFAMILY SSF56784 583 889 4.03E-60 T 12-10-2018 IPR036412 HAD-like superfamily Vc3S01_2489 eb08c67f6b36a91fd93a840eeb6adae8 898 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 355 861 1.4E-93 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Vc3S01_2489 eb08c67f6b36a91fd93a840eeb6adae8 898 SUPERFAMILY SSF55008 1 62 1.7E-8 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Vc3S01_2489 eb08c67f6b36a91fd93a840eeb6adae8 898 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 297 893 1.2E-183 T 12-10-2018 Vc3S01_2489 eb08c67f6b36a91fd93a840eeb6adae8 898 SUPERFAMILY SSF55008 156 228 1.7E-16 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Vc3S01_2489 eb08c67f6b36a91fd93a840eeb6adae8 898 SUPERFAMILY SSF55008 65 126 7.72E-6 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Vc3S01_p20169 a85e9ccf1fe7be253ddbdb93fa8bee47 216 Gene3D G3DSA:3.40.50.140 1 124 4.3E-42 T 12-10-2018 Vc3S01_p20169 a85e9ccf1fe7be253ddbdb93fa8bee47 216 SMART SM00493 1 124 3.2E-15 T 12-10-2018 IPR006171 TOPRIM domain Vc3S01_p20169 a85e9ccf1fe7be253ddbdb93fa8bee47 216 SUPERFAMILY SSF56712 1 117 2.62E-31 T 12-10-2018 IPR023405 DNA topoisomerase, type IA, core domain Vc3S01_p20169 a85e9ccf1fe7be253ddbdb93fa8bee47 216 Pfam PF01751 Toprim domain 3 116 1.9E-11 T 12-10-2018 IPR006171 TOPRIM domain Vc3S01_A1208 b363a82280fce879efbe53b5934c4b61 560 SMART SM00495 506 556 2.4E-5 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 Vc3S01_A1208 b363a82280fce879efbe53b5934c4b61 560 ProSitePatterns PS01095 Chitinases family 18 active site. 146 154 - T 12-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 Vc3S01_A1208 b363a82280fce879efbe53b5934c4b61 560 Pfam PF16403 Domain of unknown function (DUF5011) 354 423 1.3E-17 T 12-10-2018 IPR032179 Domain of unknown function DUF5011 Vc3S01_A1208 b363a82280fce879efbe53b5934c4b61 560 Pfam PF16403 Domain of unknown function (DUF5011) 430 500 7.6E-18 T 12-10-2018 IPR032179 Domain of unknown function DUF5011 Vc3S01_A1208 b363a82280fce879efbe53b5934c4b61 560 SUPERFAMILY SSF51445 30 326 8.43E-60 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily Vc3S01_A1208 b363a82280fce879efbe53b5934c4b61 560 Gene3D G3DSA:3.20.20.80 27 345 4.4E-96 T 12-10-2018 Vc3S01_A1208 b363a82280fce879efbe53b5934c4b61 560 Gene3D G3DSA:2.60.40.10 346 423 5.9E-27 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_A1208 b363a82280fce879efbe53b5934c4b61 560 SMART SM00636 32 317 7.8E-4 T 12-10-2018 IPR011583 Chitinase II GO:0008061 Vc3S01_A1208 b363a82280fce879efbe53b5934c4b61 560 Pfam PF00704 Glycosyl hydrolases family 18 34 317 1.3E-33 T 12-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 Vc3S01_A1208 b363a82280fce879efbe53b5934c4b61 560 Gene3D G3DSA:2.60.40.10 424 503 1.1E-26 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_0473 c4a1b5615427d71eae4b8f63bf419fd6 272 Gene3D G3DSA:3.40.50.720 2 164 4.3E-52 T 12-10-2018 Vc3S01_0473 c4a1b5615427d71eae4b8f63bf419fd6 272 SUPERFAMILY SSF48179 163 270 1.5E-30 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Vc3S01_0473 c4a1b5615427d71eae4b8f63bf419fd6 272 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 163 268 1.6E-30 T 12-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Vc3S01_0473 c4a1b5615427d71eae4b8f63bf419fd6 272 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 5 99 1.1E-26 T 12-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal Vc3S01_0473 c4a1b5615427d71eae4b8f63bf419fd6 272 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 268 25.465 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Vc3S01_0473 c4a1b5615427d71eae4b8f63bf419fd6 272 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 268 2.0E-75 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Vc3S01_0473 c4a1b5615427d71eae4b8f63bf419fd6 272 PIRSF PIRSF000193 3 270 4.8E-79 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Vc3S01_0473 c4a1b5615427d71eae4b8f63bf419fd6 272 SUPERFAMILY SSF51735 4 160 5.43E-39 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_0473 c4a1b5615427d71eae4b8f63bf419fd6 272 Gene3D G3DSA:1.10.3730.10 165 272 5.8E-35 T 12-10-2018 Vc3S01_0473 c4a1b5615427d71eae4b8f63bf419fd6 272 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 224 246 - T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Vc3S01_A1485 2a3905d23ea544dfd45e14753b8adbb1 546 SUPERFAMILY SSF81442 38 545 2.49E-194 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A1485 2a3905d23ea544dfd45e14753b8adbb1 546 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 42 545 3.2E-213 T 12-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 Vc3S01_A1485 2a3905d23ea544dfd45e14753b8adbb1 546 Gene3D G3DSA:1.20.210.10 28 546 6.5E-219 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A1485 2a3905d23ea544dfd45e14753b8adbb1 546 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 270 324 - T 12-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A1485 2a3905d23ea544dfd45e14753b8adbb1 546 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 50 492 4.4E-151 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A1485 2a3905d23ea544dfd45e14753b8adbb1 546 PRINTS PR01165 Cytochrome c oxidase subunit I signature 373 391 2.7E-121 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A1485 2a3905d23ea544dfd45e14753b8adbb1 546 PRINTS PR01165 Cytochrome c oxidase subunit I signature 401 420 2.7E-121 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A1485 2a3905d23ea544dfd45e14753b8adbb1 546 PRINTS PR01165 Cytochrome c oxidase subunit I signature 217 236 2.7E-121 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A1485 2a3905d23ea544dfd45e14753b8adbb1 546 PRINTS PR01165 Cytochrome c oxidase subunit I signature 314 329 2.7E-121 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A1485 2a3905d23ea544dfd45e14753b8adbb1 546 PRINTS PR01165 Cytochrome c oxidase subunit I signature 88 111 2.7E-121 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A1485 2a3905d23ea544dfd45e14753b8adbb1 546 PRINTS PR01165 Cytochrome c oxidase subunit I signature 158 170 2.7E-121 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A1485 2a3905d23ea544dfd45e14753b8adbb1 546 PRINTS PR01165 Cytochrome c oxidase subunit I signature 41 66 2.7E-121 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A1485 2a3905d23ea544dfd45e14753b8adbb1 546 PRINTS PR01165 Cytochrome c oxidase subunit I signature 338 359 2.7E-121 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A1485 2a3905d23ea544dfd45e14753b8adbb1 546 PRINTS PR01165 Cytochrome c oxidase subunit I signature 115 139 2.7E-121 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A1485 2a3905d23ea544dfd45e14753b8adbb1 546 PRINTS PR01165 Cytochrome c oxidase subunit I signature 188 206 2.7E-121 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A1485 2a3905d23ea544dfd45e14753b8adbb1 546 PRINTS PR01165 Cytochrome c oxidase subunit I signature 268 289 2.7E-121 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A1485 2a3905d23ea544dfd45e14753b8adbb1 546 PRINTS PR01165 Cytochrome c oxidase subunit I signature 451 472 2.7E-121 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A0258 3af43bab3eeda8df126177c723e4fcf4 359 SUPERFAMILY SSF53448 32 209 4.61E-22 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Vc3S01_A0258 3af43bab3eeda8df126177c723e4fcf4 359 Gene3D G3DSA:2.160.10.10 221 337 2.4E-26 T 12-10-2018 Vc3S01_A0258 3af43bab3eeda8df126177c723e4fcf4 359 SUPERFAMILY SSF51161 242 336 1.74E-18 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily Vc3S01_A0258 3af43bab3eeda8df126177c723e4fcf4 359 Gene3D G3DSA:3.90.550.10 1 211 5.0E-26 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Vc3S01_A0258 3af43bab3eeda8df126177c723e4fcf4 359 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 284 311 0.0017 T 12-10-2018 IPR001451 Hexapeptide repeat Vc3S01_A0258 3af43bab3eeda8df126177c723e4fcf4 359 Pfam PF00483 Nucleotidyl transferase 34 203 3.7E-15 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Vc3S01_A1246 c9a727f76045ce9684a016cc7e382202 466 SMART SM00704 2 35 2.9E-5 T 12-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 Vc3S01_A1246 c9a727f76045ce9684a016cc7e382202 466 Pfam PF09360 Iron-binding zinc finger CDGSH type 9 30 5.4E-8 T 12-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 Vc3S01_A1246 c9a727f76045ce9684a016cc7e382202 466 Gene3D G3DSA:3.20.20.70 92 461 1.6E-102 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_A1246 c9a727f76045ce9684a016cc7e382202 466 PIRSF PIRSF006429 1 466 3.6E-144 T 12-10-2018 IPR024188 Glutamate synthase large subunit-like protein Vc3S01_A1246 c9a727f76045ce9684a016cc7e382202 466 SUPERFAMILY SSF51395 79 459 4.03E-100 T 12-10-2018 Vc3S01_A1246 c9a727f76045ce9684a016cc7e382202 466 Gene3D G3DSA:3.40.5.90 2 42 3.8E-10 T 12-10-2018 Vc3S01_A1246 c9a727f76045ce9684a016cc7e382202 466 PIRSF PIRSF500061 2 466 6.0E-152 T 12-10-2018 Vc3S01_A1246 c9a727f76045ce9684a016cc7e382202 466 Pfam PF01645 Conserved region in glutamate synthase 116 433 5.8E-92 T 12-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 Vc3S01_2527 b6c6a4f69c1417edbf9c1275efd806f3 392 SUPERFAMILY SSF56601 11 283 7.02E-85 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Vc3S01_2527 b6c6a4f69c1417edbf9c1275efd806f3 392 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 283 372 4.3E-29 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Vc3S01_2527 b6c6a4f69c1417edbf9c1275efd806f3 392 Gene3D G3DSA:3.40.710.10 27 282 9.5E-91 T 12-10-2018 Vc3S01_2527 b6c6a4f69c1417edbf9c1275efd806f3 392 Gene3D G3DSA:2.60.410.10 283 373 4.7E-31 T 12-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Vc3S01_2527 b6c6a4f69c1417edbf9c1275efd806f3 392 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 33 263 1.4E-95 T 12-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 Vc3S01_2527 b6c6a4f69c1417edbf9c1275efd806f3 392 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 122 139 2.6E-17 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Vc3S01_2527 b6c6a4f69c1417edbf9c1275efd806f3 392 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 149 162 2.6E-17 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Vc3S01_2527 b6c6a4f69c1417edbf9c1275efd806f3 392 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 66 77 2.6E-17 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Vc3S01_2527 b6c6a4f69c1417edbf9c1275efd806f3 392 SUPERFAMILY SSF69189 283 375 2.16E-28 T 12-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Vc3S01_2527 b6c6a4f69c1417edbf9c1275efd806f3 392 SMART SM00936 283 373 1.2E-38 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Vc3S01_0752 ca2f30c26b21ac3e0f6bf517e7a4576c 407 SUPERFAMILY SSF63380 105 272 5.11E-35 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Vc3S01_0752 ca2f30c26b21ac3e0f6bf517e7a4576c 407 Pfam PF00175 Oxidoreductase NAD-binding domain 277 385 5.0E-16 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 Vc3S01_0752 ca2f30c26b21ac3e0f6bf517e7a4576c 407 PIRSF PIRSF000044 1 407 1.6E-216 T 12-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 Vc3S01_0752 ca2f30c26b21ac3e0f6bf517e7a4576c 407 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 42 115 2.4E-10 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Vc3S01_0752 ca2f30c26b21ac3e0f6bf517e7a4576c 407 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 1 407 62.318 T 12-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 Vc3S01_0752 ca2f30c26b21ac3e0f6bf517e7a4576c 407 SUPERFAMILY SSF54292 35 124 2.42E-21 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Vc3S01_0752 ca2f30c26b21ac3e0f6bf517e7a4576c 407 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 3 407 1.1E-226 T 12-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 Vc3S01_0752 ca2f30c26b21ac3e0f6bf517e7a4576c 407 Pfam PF00970 Oxidoreductase FAD-binding domain 204 266 1.2E-7 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 Vc3S01_0752 ca2f30c26b21ac3e0f6bf517e7a4576c 407 Gene3D G3DSA:2.40.30.10 126 264 4.0E-52 T 12-10-2018 Vc3S01_0752 ca2f30c26b21ac3e0f6bf517e7a4576c 407 Gene3D G3DSA:3.40.50.80 275 393 2.7E-30 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Vc3S01_0752 ca2f30c26b21ac3e0f6bf517e7a4576c 407 SUPERFAMILY SSF52343 258 402 1.7E-35 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Vc3S01_0752 ca2f30c26b21ac3e0f6bf517e7a4576c 407 Gene3D G3DSA:3.10.20.30 34 125 1.4E-31 T 12-10-2018 IPR012675 Beta-grasp domain superfamily Vc3S01_0752 ca2f30c26b21ac3e0f6bf517e7a4576c 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 276 295 1.0E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Vc3S01_0752 ca2f30c26b21ac3e0f6bf517e7a4576c 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 302 311 1.0E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Vc3S01_0752 ca2f30c26b21ac3e0f6bf517e7a4576c 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 209 216 1.0E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Vc3S01_0752 ca2f30c26b21ac3e0f6bf517e7a4576c 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 373 381 1.0E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Vc3S01_0752 ca2f30c26b21ac3e0f6bf517e7a4576c 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 242 251 1.0E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Vc3S01_A1196 8be4a3e83f15eba8d4a1f0f0861b00db 92 Gene3D G3DSA:1.10.760.10 5 88 1.7E-21 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Vc3S01_A1196 8be4a3e83f15eba8d4a1f0f0861b00db 92 SUPERFAMILY SSF46626 6 86 6.55E-19 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Vc3S01_A1196 8be4a3e83f15eba8d4a1f0f0861b00db 92 Pfam PF00034 Cytochrome c 17 82 1.9E-6 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_0574 b71f6c74d21d57bb1de140ac0e7b64b6 556 Gene3D G3DSA:3.30.750.24 428 550 2.1E-14 T 12-10-2018 IPR036513 STAS domain superfamily Vc3S01_0574 b71f6c74d21d57bb1de140ac0e7b64b6 556 Pfam PF00916 Sulfate permease family 11 375 7.9E-85 T 12-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 Vc3S01_0574 b71f6c74d21d57bb1de140ac0e7b64b6 556 Pfam PF01740 STAS domain 440 533 4.5E-12 T 12-10-2018 IPR002645 STAS domain Vc3S01_0574 b71f6c74d21d57bb1de140ac0e7b64b6 556 SUPERFAMILY SSF52091 439 541 4.12E-11 T 12-10-2018 IPR036513 STAS domain superfamily Vc3S01_0798 abfa842d27e380dd2e4e20f6ae2b5ee1 104 SUPERFAMILY SSF46626 4 104 8.17E-25 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Vc3S01_0798 abfa842d27e380dd2e4e20f6ae2b5ee1 104 Pfam PF00034 Cytochrome c 31 104 5.8E-10 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_0798 abfa842d27e380dd2e4e20f6ae2b5ee1 104 Gene3D G3DSA:1.10.760.10 22 104 5.4E-27 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Vc3S01_1429 6c0e3e6e3a425fd41e7c63c483792b68 325 Gene3D G3DSA:3.30.360.10 123 324 1.5E-26 T 12-10-2018 Vc3S01_1429 6c0e3e6e3a425fd41e7c63c483792b68 325 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 1 114 7.0E-19 T 12-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Vc3S01_1429 6c0e3e6e3a425fd41e7c63c483792b68 325 Gene3D G3DSA:3.40.50.720 1 122 7.9E-31 T 12-10-2018 Vc3S01_1429 6c0e3e6e3a425fd41e7c63c483792b68 325 SUPERFAMILY SSF51735 2 150 1.81E-41 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_1429 6c0e3e6e3a425fd41e7c63c483792b68 325 SUPERFAMILY SSF55347 125 293 6.05E-19 T 12-10-2018 Vc3S01_p20016 19f9f3ac9a65582e5e9cf21504b1ac3f 904 Pfam PF10412 Type IV secretion-system coupling protein DNA-binding domain 133 177 4.4E-5 T 12-10-2018 IPR019476 Type IV secretion system coupling protein TraD, DNA-binding domain Vc3S01_p20016 19f9f3ac9a65582e5e9cf21504b1ac3f 904 Pfam PF12696 TraM recognition site of TraD and TraG 443 522 2.0E-6 T 12-10-2018 IPR032689 TraD/TraG, TraM recognition site Vc3S01_p20016 19f9f3ac9a65582e5e9cf21504b1ac3f 904 SUPERFAMILY SSF52540 129 582 1.3E-28 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_p20016 19f9f3ac9a65582e5e9cf21504b1ac3f 904 Gene3D G3DSA:3.40.50.300 360 596 4.3E-15 T 12-10-2018 Vc3S01_p20016 19f9f3ac9a65582e5e9cf21504b1ac3f 904 Gene3D G3DSA:3.40.50.300 87 242 1.8E-11 T 12-10-2018 Vc3S01_2816 4979d38f3b81934c5dd270c1300e2518 203 PIRSF PIRSF006158 1 203 2.8E-70 T 12-10-2018 IPR016476 SH3 domain protein Vc3S01_2816 4979d38f3b81934c5dd270c1300e2518 203 SMART SM00287 20 86 1.2E-9 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type Vc3S01_2816 4979d38f3b81934c5dd270c1300e2518 203 Gene3D G3DSA:2.30.30.40 31 86 7.4E-10 T 12-10-2018 Vc3S01_2816 4979d38f3b81934c5dd270c1300e2518 203 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 24 202 1.4E-53 T 12-10-2018 IPR016476 SH3 domain protein Vc3S01_2816 4979d38f3b81934c5dd270c1300e2518 203 Pfam PF08239 Bacterial SH3 domain 33 82 1.2E-8 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type Vc3S01_A1876 cf6aa4c2b33abf54302018a5576abf17 275 Pfam PF01116 Fructose-bisphosphate aldolase class-II 3 274 4.9E-78 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Vc3S01_A1876 cf6aa4c2b33abf54302018a5576abf17 275 Gene3D G3DSA:3.20.20.70 1 275 8.0E-84 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_A1876 cf6aa4c2b33abf54302018a5576abf17 275 PIRSF PIRSF001359 1 275 5.6E-71 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Vc3S01_A1876 cf6aa4c2b33abf54302018a5576abf17 275 SUPERFAMILY SSF51569 2 274 7.47E-83 T 12-10-2018 Vc3S01_A1876 cf6aa4c2b33abf54302018a5576abf17 275 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 273 1.6E-70 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Vc3S01_A0026 100b705d1bdff42d7524e9ef5b0a54d7 164 PIRSF PIRSF001467 1 164 3.4E-26 T 12-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 Vc3S01_A0026 100b705d1bdff42d7524e9ef5b0a54d7 164 SUPERFAMILY SSF50891 2 162 3.8E-57 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily Vc3S01_A0026 100b705d1bdff42d7524e9ef5b0a54d7 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 12-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 Vc3S01_A0026 100b705d1bdff42d7524e9ef5b0a54d7 164 Gene3D G3DSA:2.40.100.10 1 163 9.7E-63 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily Vc3S01_A0026 100b705d1bdff42d7524e9ef5b0a54d7 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 5.5E-10 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Vc3S01_A0026 100b705d1bdff42d7524e9ef5b0a54d7 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 5.5E-10 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Vc3S01_A0026 100b705d1bdff42d7524e9ef5b0a54d7 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 5.5E-10 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Vc3S01_A0026 100b705d1bdff42d7524e9ef5b0a54d7 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 2 161 3.8E-46 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Vc3S01_A1983 f307f04f27ef87f69ecdc3823eb06379 254 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 3.6E-5 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Vc3S01_A1983 f307f04f27ef87f69ecdc3823eb06379 254 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 3.6E-5 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Vc3S01_A1983 f307f04f27ef87f69ecdc3823eb06379 254 SMART SM00420 6 58 9.8E-19 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Vc3S01_A1983 f307f04f27ef87f69ecdc3823eb06379 254 Gene3D G3DSA:1.10.10.10 1 60 6.5E-9 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A1983 f307f04f27ef87f69ecdc3823eb06379 254 SUPERFAMILY SSF46785 5 58 4.37E-12 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A1983 f307f04f27ef87f69ecdc3823eb06379 254 SUPERFAMILY SSF100950 75 233 1.15E-25 T 12-10-2018 IPR037171 NagB/RpiA transferase-like Vc3S01_A1983 f307f04f27ef87f69ecdc3823eb06379 254 SMART SM01134 73 233 5.1E-62 T 12-10-2018 Vc3S01_A1983 f307f04f27ef87f69ecdc3823eb06379 254 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 3.4E-14 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Vc3S01_A1983 f307f04f27ef87f69ecdc3823eb06379 254 Pfam PF00455 DeoR C terminal sensor domain 75 232 2.9E-48 T 12-10-2018 IPR014036 DeoR C-terminal sensor domain Vc3S01_A1983 f307f04f27ef87f69ecdc3823eb06379 254 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 12-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 Vc3S01_A1335 14ef9cdcf0a6259db9890bcc8504b6cf 461 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 461 1.6E-251 T 12-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 Vc3S01_A1335 14ef9cdcf0a6259db9890bcc8504b6cf 461 Gene3D G3DSA:3.40.50.300 77 345 6.9E-110 T 12-10-2018 Vc3S01_A1335 14ef9cdcf0a6259db9890bcc8504b6cf 461 SMART SM00382 143 328 4.3E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_A1335 14ef9cdcf0a6259db9890bcc8504b6cf 461 Gene3D G3DSA:2.40.10.170 1 76 2.8E-28 T 12-10-2018 Vc3S01_A1335 14ef9cdcf0a6259db9890bcc8504b6cf 461 SUPERFAMILY SSF50615 1 76 2.3E-24 T 12-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Vc3S01_A1335 14ef9cdcf0a6259db9890bcc8504b6cf 461 Gene3D G3DSA:1.10.1140.10 346 461 4.7E-56 T 12-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Vc3S01_A1335 14ef9cdcf0a6259db9890bcc8504b6cf 461 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 461 56.072 T 12-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 Vc3S01_A1335 14ef9cdcf0a6259db9890bcc8504b6cf 461 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 74 3.5E-21 T 12-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Vc3S01_A1335 14ef9cdcf0a6259db9890bcc8504b6cf 461 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 131 343 5.3E-63 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Vc3S01_A1335 14ef9cdcf0a6259db9890bcc8504b6cf 461 SUPERFAMILY SSF52540 78 348 7.55E-89 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A1335 14ef9cdcf0a6259db9890bcc8504b6cf 461 SUPERFAMILY SSF47917 346 460 1.18E-52 T 12-10-2018 Vc3S01_A1335 14ef9cdcf0a6259db9890bcc8504b6cf 461 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 334 343 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Vc3S01_0240 4d029de607656236452a2bd88380f0c9 510 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 5 508 1.1E-227 T 12-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Vc3S01_0240 4d029de607656236452a2bd88380f0c9 510 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 5 510 49.156 T 12-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Vc3S01_0240 4d029de607656236452a2bd88380f0c9 510 Gene3D G3DSA:3.40.1450.10 78 310 3.8E-209 T 12-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Vc3S01_0240 4d029de607656236452a2bd88380f0c9 510 Gene3D G3DSA:3.40.720.10 6 509 3.8E-209 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Vc3S01_0240 4d029de607656236452a2bd88380f0c9 510 Pfam PF01676 Metalloenzyme superfamily 5 498 3.2E-80 T 12-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 Vc3S01_0240 4d029de607656236452a2bd88380f0c9 510 PIRSF PIRSF001492 1 510 1.5E-201 T 12-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Vc3S01_0240 4d029de607656236452a2bd88380f0c9 510 SUPERFAMILY SSF64158 78 308 1.96E-80 T 12-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Vc3S01_0240 4d029de607656236452a2bd88380f0c9 510 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 83 297 3.5E-80 T 12-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Vc3S01_0240 4d029de607656236452a2bd88380f0c9 510 SUPERFAMILY SSF53649 4 509 1.01E-75 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Vc3S01_A0785 0c1f2f11147deecb94deaf726fd17995 114 Pfam PF08888 HopJ type III effector protein 3 111 3.1E-50 T 12-10-2018 IPR014984 HopJ type III effector protein Vc3S01_A0785 0c1f2f11147deecb94deaf726fd17995 114 Gene3D G3DSA:3.20.160.10 1 114 5.6E-53 T 12-10-2018 IPR038604 Type III effector HopJ superfamily Vc3S01_A1285 ddb71ff003c17ee5ff83853e948ae4ad 441 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 440 7.7E-153 T 12-10-2018 IPR010263 Type VI secretion protein, VC_A0114 Vc3S01_A1285 ddb71ff003c17ee5ff83853e948ae4ad 441 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 439 2.6E-137 T 12-10-2018 IPR010263 Type VI secretion protein, VC_A0114 Vc3S01_A0719 00a97a5a7c984b7c16cec019615d321b 220 Gene3D G3DSA:2.40.10.220 113 219 4.4E-8 T 12-10-2018 Vc3S01_A0719 00a97a5a7c984b7c16cec019615d321b 220 SUPERFAMILY SSF141371 116 218 5.76E-22 T 12-10-2018 Vc3S01_A0719 00a97a5a7c984b7c16cec019615d321b 220 Pfam PF07238 PilZ domain 113 213 6.7E-13 T 12-10-2018 IPR009875 PilZ domain GO:0035438 Vc3S01_A0719 00a97a5a7c984b7c16cec019615d321b 220 Pfam PF12945 Flagellar protein YcgR 15 105 1.1E-8 T 12-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal Vc3S01_A0719 00a97a5a7c984b7c16cec019615d321b 220 Gene3D G3DSA:2.30.110.10 3 112 3.1E-11 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Vc3S01_A0719 00a97a5a7c984b7c16cec019615d321b 220 SUPERFAMILY SSF141371 2 115 4.71E-29 T 12-10-2018 Vc3S01_0764 4bfcf5d45f53ae80c6c70b109649603c 223 SUPERFAMILY SSF158682 81 222 1.96E-27 T 12-10-2018 IPR029024 TerB-like Vc3S01_0764 4bfcf5d45f53ae80c6c70b109649603c 223 Gene3D G3DSA:1.10.3680.10 90 223 2.5E-13 T 12-10-2018 IPR029024 TerB-like Vc3S01_0764 4bfcf5d45f53ae80c6c70b109649603c 223 Pfam PF04391 Protein of unknown function (DUF533) 43 220 7.5E-63 T 12-10-2018 IPR007486 Inner membrane protein YebE Vc3S01_A1351 6840197e62aaf6f980391440c0afc792 521 Gene3D G3DSA:3.40.720.10 27 393 9.9E-99 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Vc3S01_A1351 6840197e62aaf6f980391440c0afc792 521 Gene3D G3DSA:3.30.1120.10 394 427 9.9E-99 T 12-10-2018 Vc3S01_A1351 6840197e62aaf6f980391440c0afc792 521 SUPERFAMILY SSF53649 23 469 3.2E-121 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Vc3S01_A1351 6840197e62aaf6f980391440c0afc792 521 Pfam PF14707 C-terminal region of aryl-sulfatase 392 486 8.3E-7 T 12-10-2018 Vc3S01_A1351 6840197e62aaf6f980391440c0afc792 521 Pfam PF00884 Sulfatase 27 353 1.4E-66 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 Vc3S01_0036 27e9157e76d139b01480750fb4e42ae1 305 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 7 294 61.639 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Vc3S01_0036 27e9157e76d139b01480750fb4e42ae1 305 Gene3D G3DSA:1.20.58.180 216 298 5.3E-34 T 12-10-2018 Vc3S01_0036 27e9157e76d139b01480750fb4e42ae1 305 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 9 293 5.1E-149 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Vc3S01_0036 27e9157e76d139b01480750fb4e42ae1 305 SUPERFAMILY SSF55681 8 293 1.69E-132 T 12-10-2018 Vc3S01_0036 27e9157e76d139b01480750fb4e42ae1 305 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 7 302 2.1E-169 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Vc3S01_0036 27e9157e76d139b01480750fb4e42ae1 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 139 159 2.7E-70 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Vc3S01_0036 27e9157e76d139b01480750fb4e42ae1 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 113 137 2.7E-70 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Vc3S01_0036 27e9157e76d139b01480750fb4e42ae1 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 254 270 2.7E-70 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Vc3S01_0036 27e9157e76d139b01480750fb4e42ae1 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 61 76 2.7E-70 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Vc3S01_0036 27e9157e76d139b01480750fb4e42ae1 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 82 102 2.7E-70 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Vc3S01_0036 27e9157e76d139b01480750fb4e42ae1 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 162 177 2.7E-70 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Vc3S01_0036 27e9157e76d139b01480750fb4e42ae1 305 Gene3D G3DSA:3.30.930.10 1 215 4.5E-110 T 12-10-2018 Vc3S01_A1181 0e6d7b69b5a680f7bcd037bc7c07faab 600 Gene3D G3DSA:3.40.390.10 73 198 3.8E-5 T 12-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 Vc3S01_A1181 0e6d7b69b5a680f7bcd037bc7c07faab 600 Gene3D G3DSA:2.60.40.10 369 481 1.2E-6 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_A1181 0e6d7b69b5a680f7bcd037bc7c07faab 600 Pfam PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase 391 465 1.9E-6 T 12-10-2018 IPR018905 Alpha-galactosidase, NEW3 domain Vc3S01_A1181 0e6d7b69b5a680f7bcd037bc7c07faab 600 SUPERFAMILY SSF55486 54 194 4.3E-12 T 12-10-2018 Vc3S01_A1181 0e6d7b69b5a680f7bcd037bc7c07faab 600 Pfam PF05548 Gametolysin peptidase M11 97 225 1.4E-5 T 12-10-2018 IPR008752 Peptidase M11, gametolysin Vc3S01_2195 99b44bd81555c09b06725c04fdea1c7a 334 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 334 182.409 T 12-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 Vc3S01_2195 99b44bd81555c09b06725c04fdea1c7a 334 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 258 331 1.9E-33 T 12-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 Vc3S01_2195 99b44bd81555c09b06725c04fdea1c7a 334 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 16 240 3.9E-117 T 12-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 Vc3S01_2195 99b44bd81555c09b06725c04fdea1c7a 334 Gene3D G3DSA:1.10.10.10 262 334 4.3E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_2195 99b44bd81555c09b06725c04fdea1c7a 334 SMART SM00382 56 183 4.0E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_2195 99b44bd81555c09b06725c04fdea1c7a 334 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 28 331 4.9E-147 T 12-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 Vc3S01_2195 99b44bd81555c09b06725c04fdea1c7a 334 SUPERFAMILY SSF52540 25 256 1.34E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2195 99b44bd81555c09b06725c04fdea1c7a 334 Gene3D G3DSA:3.40.50.300 25 186 7.8E-41 T 12-10-2018 Vc3S01_2195 99b44bd81555c09b06725c04fdea1c7a 334 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 255 332 1.0E-38 T 12-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 Vc3S01_2195 99b44bd81555c09b06725c04fdea1c7a 334 Gene3D G3DSA:1.10.8.60 187 260 5.4E-31 T 12-10-2018 Vc3S01_2195 99b44bd81555c09b06725c04fdea1c7a 334 SUPERFAMILY SSF46785 262 332 2.5E-25 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_0426 03e32a4fc29a092ff0a96af299bac9a8 106 Gene3D G3DSA:3.30.750.24 5 102 1.6E-13 T 12-10-2018 IPR036513 STAS domain superfamily Vc3S01_0426 03e32a4fc29a092ff0a96af299bac9a8 106 Pfam PF13466 STAS domain 15 93 2.6E-19 T 12-10-2018 IPR002645 STAS domain Vc3S01_0426 03e32a4fc29a092ff0a96af299bac9a8 106 SUPERFAMILY SSF52091 14 97 2.75E-15 T 12-10-2018 IPR036513 STAS domain superfamily Vc3S01_3085 edc7cb859f3404a65887596f4332a354 205 Gene3D G3DSA:1.10.760.10 109 205 1.6E-26 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Vc3S01_3085 edc7cb859f3404a65887596f4332a354 205 Gene3D G3DSA:1.10.760.10 19 108 9.1E-27 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Vc3S01_3085 edc7cb859f3404a65887596f4332a354 205 PIRSF PIRSF000005 1 205 1.2E-65 T 12-10-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 Vc3S01_3085 edc7cb859f3404a65887596f4332a354 205 SUPERFAMILY SSF46626 114 203 8.25E-20 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Vc3S01_3085 edc7cb859f3404a65887596f4332a354 205 Pfam PF00034 Cytochrome c 25 103 1.4E-9 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_3085 edc7cb859f3404a65887596f4332a354 205 Pfam PF00034 Cytochrome c 116 201 4.5E-9 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_3085 edc7cb859f3404a65887596f4332a354 205 SUPERFAMILY SSF46626 6 105 1.25E-21 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Vc3S01_A0569 fabb48206d1432406dd33da5f2eb1c53 304 SMART SM00448 173 290 8.1E-15 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A0569 fabb48206d1432406dd33da5f2eb1c53 304 SUPERFAMILY SSF52172 171 292 2.56E-21 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_A0569 fabb48206d1432406dd33da5f2eb1c53 304 SMART SM00260 11 147 7.2E-21 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Vc3S01_A0569 fabb48206d1432406dd33da5f2eb1c53 304 Gene3D G3DSA:2.30.30.40 17 141 2.0E-24 T 12-10-2018 Vc3S01_A0569 fabb48206d1432406dd33da5f2eb1c53 304 Gene3D G3DSA:2.40.50.180 31 146 2.0E-24 T 12-10-2018 Vc3S01_A0569 fabb48206d1432406dd33da5f2eb1c53 304 SUPERFAMILY SSF50341 11 152 7.72E-30 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Vc3S01_A0569 fabb48206d1432406dd33da5f2eb1c53 304 Gene3D G3DSA:3.40.50.2300 162 299 1.9E-22 T 12-10-2018 Vc3S01_A0569 fabb48206d1432406dd33da5f2eb1c53 304 Pfam PF01584 CheW-like domain 14 149 3.2E-30 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Vc3S01_A0569 fabb48206d1432406dd33da5f2eb1c53 304 Pfam PF00072 Response regulator receiver domain 175 289 1.6E-14 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A0569 fabb48206d1432406dd33da5f2eb1c53 304 PIRSF PIRSF002867 1 298 3.2E-89 T 12-10-2018 IPR024181 Chemotaxis response regulator CheV Vc3S01_0817 d0b29ae97cafb867d724f6c7dd38f36d 417 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 4 395 2.1E-110 T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 Vc3S01_0817 d0b29ae97cafb867d724f6c7dd38f36d 417 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 319 339 - T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 Vc3S01_0817 d0b29ae97cafb867d724f6c7dd38f36d 417 Pfam PF00860 Permease family 3 371 1.1E-90 T 12-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 Vc3S01_A0012 a5a655a20fcd8774495164dd2f23a2a7 238 Gene3D G3DSA:3.30.70.980 83 235 5.1E-44 T 12-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A0012 a5a655a20fcd8774495164dd2f23a2a7 238 Gene3D G3DSA:3.30.70.980 131 202 5.1E-44 T 12-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A0012 a5a655a20fcd8774495164dd2f23a2a7 238 Pfam PF01709 Transcriptional regulator 5 235 1.4E-70 T 12-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A0012 a5a655a20fcd8774495164dd2f23a2a7 238 SUPERFAMILY SSF75625 1 237 1.83E-74 T 12-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A0012 a5a655a20fcd8774495164dd2f23a2a7 238 Gene3D G3DSA:1.10.10.200 17 78 2.7E-17 T 12-10-2018 IPR017856 Integrase-like, N-terminal Vc3S01_A0012 a5a655a20fcd8774495164dd2f23a2a7 238 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 238 26.824 T 12-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_2228 48c85ec062739c26e1cacfa716ea7faa 426 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 421 1.0E-155 T 12-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 Vc3S01_2228 48c85ec062739c26e1cacfa716ea7faa 426 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 424 2.0E-141 T 12-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Vc3S01_2228 48c85ec062739c26e1cacfa716ea7faa 426 Gene3D G3DSA:3.65.10.10 242 419 2.4E-159 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Vc3S01_2228 48c85ec062739c26e1cacfa716ea7faa 426 ProSitePatterns PS00104 EPSP synthase signature 1. 90 104 - T 12-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Vc3S01_2228 48c85ec062739c26e1cacfa716ea7faa 426 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 426 34.525 T 12-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Vc3S01_2228 48c85ec062739c26e1cacfa716ea7faa 426 PIRSF PIRSF000505 1 426 1.7E-155 T 12-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Vc3S01_2228 48c85ec062739c26e1cacfa716ea7faa 426 ProSitePatterns PS00885 EPSP synthase signature 2. 339 357 - T 12-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Vc3S01_2228 48c85ec062739c26e1cacfa716ea7faa 426 SUPERFAMILY SSF55205 1 424 7.19E-145 T 12-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 Vc3S01_2228 48c85ec062739c26e1cacfa716ea7faa 426 Gene3D G3DSA:3.65.10.10 20 224 2.4E-159 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Vc3S01_0877 4bf73bcc656646a73773aa0306ec1205 371 Pfam PF01584 CheW-like domain 228 360 1.7E-15 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Vc3S01_0877 4bf73bcc656646a73773aa0306ec1205 371 SUPERFAMILY SSF50341 225 361 4.97E-15 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Vc3S01_0877 4bf73bcc656646a73773aa0306ec1205 371 SMART SM00260 224 358 4.6E-4 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Vc3S01_0877 4bf73bcc656646a73773aa0306ec1205 371 PIRSF PIRSF020479 5 371 8.0E-140 T 12-10-2018 IPR014506 Uncharacterised conserved protein UCP020479, signal transduction CheW-like Vc3S01_2972 e8cfd005b88edc903db61d78e56e64a6 441 Pfam PF00753 Metallo-beta-lactamase superfamily 15 182 1.8E-10 T 12-10-2018 IPR001279 Metallo-beta-lactamase Vc3S01_2972 e8cfd005b88edc903db61d78e56e64a6 441 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 380 440 4.1E-13 T 12-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain Vc3S01_2972 e8cfd005b88edc903db61d78e56e64a6 441 SMART SM00849 13 220 6.1E-18 T 12-10-2018 IPR001279 Metallo-beta-lactamase Vc3S01_2972 e8cfd005b88edc903db61d78e56e64a6 441 Gene3D G3DSA:3.40.50.10890 204 392 8.6E-136 T 12-10-2018 Vc3S01_2972 e8cfd005b88edc903db61d78e56e64a6 441 Pfam PF10996 Beta-Casp domain 236 366 7.7E-29 T 12-10-2018 IPR022712 Beta-Casp domain Vc3S01_2972 e8cfd005b88edc903db61d78e56e64a6 441 SMART SM01027 236 366 2.7E-55 T 12-10-2018 IPR022712 Beta-Casp domain Vc3S01_2972 e8cfd005b88edc903db61d78e56e64a6 441 SUPERFAMILY SSF56281 1 434 7.47E-124 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Vc3S01_2972 e8cfd005b88edc903db61d78e56e64a6 441 Gene3D G3DSA:3.60.15.10 6 427 8.6E-136 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Vc3S01_A0299 00bf3034ca64ae52f3f5cad4683a4e78 466 Gene3D G3DSA:3.50.50.60 30 395 1.6E-62 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_A0299 00bf3034ca64ae52f3f5cad4683a4e78 466 SUPERFAMILY SSF51905 19 307 5.0E-37 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_A0299 00bf3034ca64ae52f3f5cad4683a4e78 466 Gene3D G3DSA:3.30.9.10 124 354 1.6E-62 T 12-10-2018 Vc3S01_A0299 00bf3034ca64ae52f3f5cad4683a4e78 466 Pfam PF01266 FAD dependent oxidoreductase 30 393 3.7E-50 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Vc3S01_A0299 00bf3034ca64ae52f3f5cad4683a4e78 466 TIGRFAM TIGR03329 Phn_aa_oxid: putative aminophosphonate oxidoreductase 5 464 5.3E-247 T 12-10-2018 IPR017715 Putative aminophosphonate oxidoreductase Vc3S01_0994 90d84d2fb8c88ca28e411222ae36f544 1392 SUPERFAMILY SSF50985 843 1092 1.99E-11 T 12-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II Vc3S01_0994 90d84d2fb8c88ca28e411222ae36f544 1392 Gene3D G3DSA:2.130.10.30 1186 1390 3.6E-17 T 12-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II Vc3S01_0994 90d84d2fb8c88ca28e411222ae36f544 1392 Gene3D G3DSA:2.130.10.30 959 1117 9.1E-17 T 12-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II Vc3S01_0994 90d84d2fb8c88ca28e411222ae36f544 1392 SUPERFAMILY SSF50985 1033 1250 4.97E-23 T 12-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II Vc3S01_0994 90d84d2fb8c88ca28e411222ae36f544 1392 SUPERFAMILY SSF50985 1262 1371 5.23E-9 T 12-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II Vc3S01_A0839 5a95899272d255a4f25624a9dabf8181 339 Gene3D G3DSA:3.40.50.720 3 274 5.7E-141 T 12-10-2018 Vc3S01_A0839 5a95899272d255a4f25624a9dabf8181 339 Gene3D G3DSA:3.90.25.10 194 329 5.7E-141 T 12-10-2018 Vc3S01_A0839 5a95899272d255a4f25624a9dabf8181 339 PRINTS PR01713 Nucleotide sugar epimerase signature 231 246 1.3E-5 T 12-10-2018 Vc3S01_A0839 5a95899272d255a4f25624a9dabf8181 339 PRINTS PR01713 Nucleotide sugar epimerase signature 256 271 1.3E-5 T 12-10-2018 Vc3S01_A0839 5a95899272d255a4f25624a9dabf8181 339 PRINTS PR01713 Nucleotide sugar epimerase signature 295 312 1.3E-5 T 12-10-2018 Vc3S01_A0839 5a95899272d255a4f25624a9dabf8181 339 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 324 1.4E-55 T 12-10-2018 IPR016040 NAD(P)-binding domain Vc3S01_A0839 5a95899272d255a4f25624a9dabf8181 339 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 335 1.1E-137 T 12-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 Vc3S01_A0839 5a95899272d255a4f25624a9dabf8181 339 SUPERFAMILY SSF51735 2 336 4.29E-92 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_A1998 f98dabe780f3da110b4849f13312ba93 412 Gene3D G3DSA:3.40.50.300 1 202 8.2E-66 T 12-10-2018 Vc3S01_A1998 f98dabe780f3da110b4849f13312ba93 412 SUPERFAMILY SSF52540 68 351 1.97E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A1998 f98dabe780f3da110b4849f13312ba93 412 Gene3D G3DSA:3.40.50.300 204 391 4.4E-45 T 12-10-2018 Vc3S01_A1998 f98dabe780f3da110b4849f13312ba93 412 Pfam PF00271 Helicase conserved C-terminal domain 223 331 7.1E-26 T 12-10-2018 IPR001650 Helicase, C-terminal Vc3S01_A1998 f98dabe780f3da110b4849f13312ba93 412 SMART SM00490 250 331 7.8E-29 T 12-10-2018 IPR001650 Helicase, C-terminal Vc3S01_A1998 f98dabe780f3da110b4849f13312ba93 412 Pfam PF00270 DEAD/DEAH box helicase 24 185 4.0E-47 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Vc3S01_A1998 f98dabe780f3da110b4849f13312ba93 412 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 145 153 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site Vc3S01_A1998 f98dabe780f3da110b4849f13312ba93 412 SMART SM00487 19 212 1.4E-46 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Vc3S01_0098 c09e0623058e218de02fd4424007c3ff 238 Gene3D G3DSA:3.40.50.1000 11 231 1.7E-60 T 12-10-2018 IPR023214 HAD superfamily Vc3S01_0098 c09e0623058e218de02fd4424007c3ff 238 Gene3D G3DSA:1.20.120.1600 24 110 1.7E-60 T 12-10-2018 Vc3S01_0098 c09e0623058e218de02fd4424007c3ff 238 Pfam PF13419 Haloacid dehalogenase-like hydrolase 15 206 2.5E-13 T 12-10-2018 Vc3S01_0098 c09e0623058e218de02fd4424007c3ff 238 SUPERFAMILY SSF56784 10 238 2.24E-40 T 12-10-2018 IPR036412 HAD-like superfamily Vc3S01_0098 c09e0623058e218de02fd4424007c3ff 238 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 196 209 4.5E-5 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Vc3S01_0098 c09e0623058e218de02fd4424007c3ff 238 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 150 166 4.5E-5 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Vc3S01_0098 c09e0623058e218de02fd4424007c3ff 238 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 10 21 4.5E-5 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Vc3S01_0098 c09e0623058e218de02fd4424007c3ff 238 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 111 199 1.5E-9 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Vc3S01_0820 6472f147263925448bd5c9ec09fcc501 190 Pfam PF03358 NADPH-dependent FMN reductase 12 135 2.5E-12 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 Vc3S01_0820 6472f147263925448bd5c9ec09fcc501 190 ProSitePatterns PS00201 Flavodoxin signature. 7 23 - T 12-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 Vc3S01_0820 6472f147263925448bd5c9ec09fcc501 190 Gene3D G3DSA:3.40.50.360 1 190 7.5E-63 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Vc3S01_0820 6472f147263925448bd5c9ec09fcc501 190 SUPERFAMILY SSF52218 4 187 9.57E-57 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Vc3S01_0820 6472f147263925448bd5c9ec09fcc501 190 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 4 186 1.3E-39 T 12-10-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 Vc3S01_A0740 6145a14c9b4c691e09caabb5c75ca175 578 Gene3D G3DSA:1.10.287.130 176 281 1.1E-6 T 12-10-2018 Vc3S01_A0740 6145a14c9b4c691e09caabb5c75ca175 578 SMART SM00304 176 228 1.3E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Vc3S01_A0740 6145a14c9b4c691e09caabb5c75ca175 578 SUPERFAMILY SSF158472 178 225 8.11E-8 T 12-10-2018 Vc3S01_A0740 6145a14c9b4c691e09caabb5c75ca175 578 PIRSF PIRSF003167 2 577 1.2E-176 T 12-10-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 Vc3S01_A0740 6145a14c9b4c691e09caabb5c75ca175 578 SUPERFAMILY SSF55874 449 567 7.99E-15 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_A0740 6145a14c9b4c691e09caabb5c75ca175 578 SMART SM00387 478 571 1.0E-9 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_A0740 6145a14c9b4c691e09caabb5c75ca175 578 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 480 568 3.3E-8 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_A0740 6145a14c9b4c691e09caabb5c75ca175 578 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 34 129 9.5E-22 T 12-10-2018 IPR029095 NarX-like, N-terminal Vc3S01_A0740 6145a14c9b4c691e09caabb5c75ca175 578 Gene3D G3DSA:1.20.120.960 40 148 2.3E-11 T 12-10-2018 Vc3S01_A0740 6145a14c9b4c691e09caabb5c75ca175 578 Gene3D G3DSA:3.30.565.10 438 575 1.7E-25 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_A0740 6145a14c9b4c691e09caabb5c75ca175 578 Pfam PF07730 Histidine kinase 369 437 1.7E-16 T 12-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Vc3S01_0758 67ec72fb826be75fec1ee4675ff6f7de 159 SUPERFAMILY SSF54534 83 158 1.01E-9 T 12-10-2018 Vc3S01_0758 67ec72fb826be75fec1ee4675ff6f7de 159 Gene3D G3DSA:3.10.50.30 80 159 9.8E-6 T 12-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 Vc3S01_0758 67ec72fb826be75fec1ee4675ff6f7de 159 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 158 7.8E-7 T 12-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 Vc3S01_A0321 afce28059a7f285e901fede62f199cad 243 SUPERFAMILY SSF117143 77 176 1.7E-11 T 12-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like Vc3S01_A0321 afce28059a7f285e901fede62f199cad 243 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 6 220 7.4E-55 T 12-10-2018 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 Vc3S01_A0321 afce28059a7f285e901fede62f199cad 243 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 120 2.0E-30 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Vc3S01_A0321 afce28059a7f285e901fede62f199cad 243 Pfam PF00460 Flagella basal body rod protein 7 35 1.3E-5 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Vc3S01_A0321 afce28059a7f285e901fede62f199cad 243 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 167 239 8.9E-16 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Vc3S01_2197 f25180f1fd83e548d7a80e104a897950 483 SUPERFAMILY SSF58104 231 480 6.15E-47 T 12-10-2018 Vc3S01_2197 f25180f1fd83e548d7a80e104a897950 483 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 289 453 4.2E-34 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Vc3S01_2197 f25180f1fd83e548d7a80e104a897950 483 Gene3D G3DSA:1.10.287.950 180 482 6.2E-51 T 12-10-2018 Vc3S01_2197 f25180f1fd83e548d7a80e104a897950 483 SMART SM00283 244 477 1.3E-36 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Vc3S01_2197 f25180f1fd83e548d7a80e104a897950 483 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 405 434 2.4E-26 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Vc3S01_2197 f25180f1fd83e548d7a80e104a897950 483 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 328 355 2.4E-26 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Vc3S01_2197 f25180f1fd83e548d7a80e104a897950 483 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 357 386 2.4E-26 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Vc3S01_2197 f25180f1fd83e548d7a80e104a897950 483 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 251 280 2.4E-26 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Vc3S01_2385 f12ff0473c1c68ce857b609019980083 142 Gene3D G3DSA:3.30.428.10 1 142 3.7E-44 T 12-10-2018 IPR036265 HIT-like superfamily Vc3S01_2385 f12ff0473c1c68ce857b609019980083 142 Pfam PF01230 HIT domain 11 99 2.6E-19 T 12-10-2018 IPR001310 Histidine triad (HIT) protein Vc3S01_2385 f12ff0473c1c68ce857b609019980083 142 SUPERFAMILY SSF54197 3 133 5.1E-35 T 12-10-2018 IPR036265 HIT-like superfamily Vc3S01_2385 f12ff0473c1c68ce857b609019980083 142 PIRSF PIRSF000714 2 141 6.7E-54 T 12-10-2018 IPR026026 Histidine triad hydrolase, Hint-type Vc3S01_A0056 6ee123bf75ac03f816b45e50b9b83904 253 SMART SM00382 28 211 1.8E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_A0056 6ee123bf75ac03f816b45e50b9b83904 253 SUPERFAMILY SSF52540 17 224 8.47E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A0056 6ee123bf75ac03f816b45e50b9b83904 253 Gene3D G3DSA:3.40.50.300 2 241 3.7E-59 T 12-10-2018 Vc3S01_A0056 6ee123bf75ac03f816b45e50b9b83904 253 Pfam PF00005 ABC transporter 20 166 6.5E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_A0056 6ee123bf75ac03f816b45e50b9b83904 253 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_3115 7de400fb26ef1eab46c30c645c0bf194 154 Gene3D G3DSA:1.10.10.10 6 59 5.3E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_3115 7de400fb26ef1eab46c30c645c0bf194 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 35 54 8.3E-10 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Vc3S01_3115 7de400fb26ef1eab46c30c645c0bf194 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 24 35 8.3E-10 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Vc3S01_3115 7de400fb26ef1eab46c30c645c0bf194 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 8 24 8.3E-10 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Vc3S01_3115 7de400fb26ef1eab46c30c645c0bf194 154 SMART SM00344 8 115 4.6E-40 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 Vc3S01_3115 7de400fb26ef1eab46c30c645c0bf194 154 Gene3D G3DSA:3.30.70.920 60 142 2.2E-31 T 12-10-2018 Vc3S01_3115 7de400fb26ef1eab46c30c645c0bf194 154 SUPERFAMILY SSF54909 69 153 5.36E-19 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel Vc3S01_3115 7de400fb26ef1eab46c30c645c0bf194 154 Pfam PF01037 Lrp/AsnC ligand binding domain 75 145 1.4E-16 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Vc3S01_3115 7de400fb26ef1eab46c30c645c0bf194 154 Pfam PF13404 AsnC-type helix-turn-helix domain 8 49 8.0E-14 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Vc3S01_3115 7de400fb26ef1eab46c30c645c0bf194 154 SUPERFAMILY SSF46785 7 68 3.44E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_1637 4b2bff6999cb0ac1bc976de662c10d3c 707 SUPERFAMILY SSF53335 399 707 6.06E-70 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Vc3S01_1637 4b2bff6999cb0ac1bc976de662c10d3c 707 SMART SM00981 56 154 7.2E-20 T 12-10-2018 IPR004114 THUMP domain GO:0003723 Vc3S01_1637 4b2bff6999cb0ac1bc976de662c10d3c 707 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 305 311 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Vc3S01_1637 4b2bff6999cb0ac1bc976de662c10d3c 707 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 195 206 - T 12-10-2018 IPR000241 Putative RNA methylase domain Vc3S01_1637 4b2bff6999cb0ac1bc976de662c10d3c 707 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 4 706 31.582 T 12-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 Vc3S01_1637 4b2bff6999cb0ac1bc976de662c10d3c 707 Gene3D G3DSA:3.30.750.80 396 487 4.4E-35 T 12-10-2018 Vc3S01_1637 4b2bff6999cb0ac1bc976de662c10d3c 707 Gene3D G3DSA:3.30.2130.30 6 255 3.3E-137 T 12-10-2018 Vc3S01_1637 4b2bff6999cb0ac1bc976de662c10d3c 707 Pfam PF02926 THUMP domain 30 153 2.7E-13 T 12-10-2018 IPR004114 THUMP domain GO:0003723 Vc3S01_1637 4b2bff6999cb0ac1bc976de662c10d3c 707 SUPERFAMILY SSF53335 140 371 2.08E-42 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Vc3S01_1637 4b2bff6999cb0ac1bc976de662c10d3c 707 Pfam PF01170 Putative RNA methylase family UPF0020 162 374 1.1E-61 T 12-10-2018 IPR000241 Putative RNA methylase domain Vc3S01_1637 4b2bff6999cb0ac1bc976de662c10d3c 707 Gene3D G3DSA:3.40.50.150 169 371 3.3E-137 T 12-10-2018 Vc3S01_1637 4b2bff6999cb0ac1bc976de662c10d3c 707 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 302 314 7.4E-5 T 12-10-2018 Vc3S01_1637 4b2bff6999cb0ac1bc976de662c10d3c 707 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 193 207 7.4E-5 T 12-10-2018 Vc3S01_1637 4b2bff6999cb0ac1bc976de662c10d3c 707 Gene3D G3DSA:3.40.50.150 488 706 1.8E-74 T 12-10-2018 Vc3S01_1637 4b2bff6999cb0ac1bc976de662c10d3c 707 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 436 661 4.4E-28 T 12-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 Vc3S01_1637 4b2bff6999cb0ac1bc976de662c10d3c 707 PIRSF PIRSF037618 1 707 2.6E-296 T 12-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 Vc3S01_p20204 15db41b972b1d645d8612f028477785f 169 Pfam PF08765 Mor transcription activator family 79 168 1.9E-15 T 12-10-2018 IPR014875 Mor transcription activator Vc3S01_p20204 15db41b972b1d645d8612f028477785f 169 SUPERFAMILY SSF46689 79 167 3.23E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_p20204 15db41b972b1d645d8612f028477785f 169 Gene3D G3DSA:1.10.10.60 127 169 4.0E-6 T 12-10-2018 Vc3S01_2068 6714bc4cab603452aaf0d63d62dc96bb 436 Pfam PF01593 Flavin containing amine oxidoreductase 16 269 1.7E-17 T 12-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 Vc3S01_2068 6714bc4cab603452aaf0d63d62dc96bb 436 SUPERFAMILY SSF51905 7 418 8.42E-51 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_2068 6714bc4cab603452aaf0d63d62dc96bb 436 Gene3D G3DSA:3.50.50.60 4 279 2.3E-28 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_0973 4b9e55b43864bf6fda0bff0ee45b6339 170 SUPERFAMILY SSF54523 8 84 5.73E-15 T 12-10-2018 Vc3S01_0973 4b9e55b43864bf6fda0bff0ee45b6339 170 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Vc3S01_0973 4b9e55b43864bf6fda0bff0ee45b6339 170 Gene3D G3DSA:3.30.700.10 8 158 1.1E-17 T 12-10-2018 Vc3S01_0973 4b9e55b43864bf6fda0bff0ee45b6339 170 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 28 1.3E-8 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Vc3S01_0973 4b9e55b43864bf6fda0bff0ee45b6339 170 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 27 1.5E-9 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Vc3S01_A0454 0fe0593fb52f039b8c1517afe991b234 713 Gene3D G3DSA:2.170.130.10 28 155 1.0E-28 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Vc3S01_A0454 0fe0593fb52f039b8c1517afe991b234 713 Pfam PF07715 TonB-dependent Receptor Plug Domain 43 151 5.3E-24 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain Vc3S01_A0454 0fe0593fb52f039b8c1517afe991b234 713 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 28 713 6.1E-123 T 12-10-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0015232|GO:0015886|GO:0019867 Vc3S01_A0454 0fe0593fb52f039b8c1517afe991b234 713 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 30 713 4.7E-113 T 12-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 Vc3S01_A0454 0fe0593fb52f039b8c1517afe991b234 713 Gene3D G3DSA:2.40.170.20 166 713 8.1E-80 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Vc3S01_A0454 0fe0593fb52f039b8c1517afe991b234 713 SUPERFAMILY SSF56935 24 713 5.5E-111 T 12-10-2018 Vc3S01_A0454 0fe0593fb52f039b8c1517afe991b234 713 Pfam PF00593 TonB dependent receptor 211 711 3.0E-47 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Vc3S01_1671 81d6eb278ab95d74e2dc79d1097d9117 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 203 222 5.3E-69 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Vc3S01_1671 81d6eb278ab95d74e2dc79d1097d9117 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 91 104 5.3E-69 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Vc3S01_1671 81d6eb278ab95d74e2dc79d1097d9117 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 32 48 5.3E-69 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Vc3S01_1671 81d6eb278ab95d74e2dc79d1097d9117 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 75 89 5.3E-69 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Vc3S01_1671 81d6eb278ab95d74e2dc79d1097d9117 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 166 185 5.3E-69 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Vc3S01_1671 81d6eb278ab95d74e2dc79d1097d9117 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 122 138 5.3E-69 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Vc3S01_1671 81d6eb278ab95d74e2dc79d1097d9117 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 247 266 5.3E-69 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Vc3S01_1671 81d6eb278ab95d74e2dc79d1097d9117 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 48 69 5.3E-69 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Vc3S01_1671 81d6eb278ab95d74e2dc79d1097d9117 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 148 162 5.3E-69 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Vc3S01_1671 81d6eb278ab95d74e2dc79d1097d9117 343 Gene3D G3DSA:3.40.190.10 132 335 5.1E-107 T 12-10-2018 Vc3S01_1671 81d6eb278ab95d74e2dc79d1097d9117 343 SUPERFAMILY SSF53850 26 340 1.09E-84 T 12-10-2018 Vc3S01_1671 81d6eb278ab95d74e2dc79d1097d9117 343 Pfam PF13416 Bacterial extracellular solute-binding protein 42 301 1.5E-36 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein Vc3S01_1671 81d6eb278ab95d74e2dc79d1097d9117 343 Gene3D G3DSA:3.40.190.10 32 306 5.1E-107 T 12-10-2018 Vc3S01_1671 81d6eb278ab95d74e2dc79d1097d9117 343 PIRSF PIRSF019574 1 343 1.9E-109 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Vc3S01_p30031 683b5a1aad2b436db9131fa59de989be 164 Pfam PF04170 NlpE N-terminal domain 69 153 3.3E-23 T 12-10-2018 IPR007298 Copper resistance lipoprotein NlpE Vc3S01_p30031 683b5a1aad2b436db9131fa59de989be 164 Gene3D G3DSA:2.40.128.640 60 164 6.7E-32 T 12-10-2018 Vc3S01_2547 1ce29ce862dab79e5bd1ba9974bd687b 760 SUPERFAMILY SSF48452 82 234 1.0E-4 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_2547 1ce29ce862dab79e5bd1ba9974bd687b 760 Gene3D G3DSA:1.25.40.10 71 240 7.8E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_2547 1ce29ce862dab79e5bd1ba9974bd687b 760 SUPERFAMILY SSF48452 178 366 2.38E-14 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_2547 1ce29ce862dab79e5bd1ba9974bd687b 760 SMART SM00028 254 287 27.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_2547 1ce29ce862dab79e5bd1ba9974bd687b 760 SMART SM00028 174 207 310.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_2547 1ce29ce862dab79e5bd1ba9974bd687b 760 SMART SM00028 334 367 37.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_2547 1ce29ce862dab79e5bd1ba9974bd687b 760 SMART SM00028 88 121 26.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_2547 1ce29ce862dab79e5bd1ba9974bd687b 760 SMART SM00028 294 327 0.016 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_2547 1ce29ce862dab79e5bd1ba9974bd687b 760 SMART SM00028 416 449 420.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_2547 1ce29ce862dab79e5bd1ba9974bd687b 760 SUPERFAMILY SSF48452 336 445 3.6E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_2547 1ce29ce862dab79e5bd1ba9974bd687b 760 Gene3D G3DSA:1.25.40.10 245 485 3.0E-18 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_A0193 90b964bef861ebf7edb21303e7f8f486 316 Pfam PF09084 NMT1/THI5 like 37 248 3.7E-71 T 12-10-2018 IPR015168 SsuA/THI5-like Vc3S01_A0193 90b964bef861ebf7edb21303e7f8f486 316 Gene3D G3DSA:3.40.190.10 109 209 2.5E-72 T 12-10-2018 Vc3S01_A0193 90b964bef861ebf7edb21303e7f8f486 316 SUPERFAMILY SSF53850 29 311 9.12E-50 T 12-10-2018 Vc3S01_A0193 90b964bef861ebf7edb21303e7f8f486 316 Gene3D G3DSA:3.40.190.10 28 303 2.5E-72 T 12-10-2018 Vc3S01_A1378 e44e40d2d159e5443d86c77b2cdffe84 305 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 5 300 3.9E-113 T 12-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 Vc3S01_A1378 e44e40d2d159e5443d86c77b2cdffe84 305 Hamap MF_01987 Ribokinase [rbsK]. 2 301 26.588 T 12-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 Vc3S01_A1378 e44e40d2d159e5443d86c77b2cdffe84 305 Pfam PF00294 pfkB family carbohydrate kinase 1 294 4.4E-76 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB Vc3S01_A1378 e44e40d2d159e5443d86c77b2cdffe84 305 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 246 259 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 Vc3S01_A1378 e44e40d2d159e5443d86c77b2cdffe84 305 PRINTS PR00990 Ribokinase signature 33 52 2.1E-35 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Vc3S01_A1378 e44e40d2d159e5443d86c77b2cdffe84 305 PRINTS PR00990 Ribokinase signature 173 188 2.1E-35 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Vc3S01_A1378 e44e40d2d159e5443d86c77b2cdffe84 305 PRINTS PR00990 Ribokinase signature 217 228 2.1E-35 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Vc3S01_A1378 e44e40d2d159e5443d86c77b2cdffe84 305 PRINTS PR00990 Ribokinase signature 6 27 2.1E-35 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Vc3S01_A1378 e44e40d2d159e5443d86c77b2cdffe84 305 PRINTS PR00990 Ribokinase signature 105 118 2.1E-35 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Vc3S01_A1378 e44e40d2d159e5443d86c77b2cdffe84 305 SUPERFAMILY SSF53613 1 302 4.21E-87 T 12-10-2018 IPR029056 Ribokinase-like Vc3S01_A1378 e44e40d2d159e5443d86c77b2cdffe84 305 Gene3D G3DSA:3.40.1190.20 1 301 2.7E-107 T 12-10-2018 IPR029056 Ribokinase-like Vc3S01_0969 0837b70de419083dc8f6753417bfe455 426 Gene3D G3DSA:1.20.120.160 305 418 1.6E-21 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 Vc3S01_0969 0837b70de419083dc8f6753417bfe455 426 SUPERFAMILY SSF47226 305 419 2.49E-22 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 Vc3S01_0969 0837b70de419083dc8f6753417bfe455 426 Pfam PF01627 Hpt domain 328 406 2.4E-12 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Vc3S01_A0967 f28996863b20b892fb0d2efae0d9e520 962 Gene3D G3DSA:2.60.40.10 526 616 5.1E-20 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_A0967 f28996863b20b892fb0d2efae0d9e520 962 Gene3D G3DSA:2.60.40.10 429 524 6.3E-16 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_A0967 f28996863b20b892fb0d2efae0d9e520 962 Gene3D G3DSA:2.60.40.10 166 263 8.0E-8 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_A0967 f28996863b20b892fb0d2efae0d9e520 962 Gene3D G3DSA:2.60.40.10 266 362 1.8E-15 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_A0967 f28996863b20b892fb0d2efae0d9e520 962 SMART SM00636 626 941 0.005 T 12-10-2018 IPR011583 Chitinase II GO:0008061 Vc3S01_A0967 f28996863b20b892fb0d2efae0d9e520 962 SUPERFAMILY SSF51445 627 946 2.95E-33 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily Vc3S01_A0967 f28996863b20b892fb0d2efae0d9e520 962 Pfam PF00704 Glycosyl hydrolases family 18 629 940 2.4E-16 T 12-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 Vc3S01_2768 b073dcbb8fa524b872c09d8b53fc229d 269 Gene3D G3DSA:3.40.50.720 3 264 1.9E-101 T 12-10-2018 Vc3S01_2768 b073dcbb8fa524b872c09d8b53fc229d 269 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 128 264 7.6E-44 T 12-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Vc3S01_2768 b073dcbb8fa524b872c09d8b53fc229d 269 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 1 265 5.8E-98 T 12-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Vc3S01_2768 b073dcbb8fa524b872c09d8b53fc229d 269 SUPERFAMILY SSF51735 1 268 2.67E-51 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_2768 b073dcbb8fa524b872c09d8b53fc229d 269 Gene3D G3DSA:3.30.360.10 127 234 1.9E-101 T 12-10-2018 Vc3S01_2768 b073dcbb8fa524b872c09d8b53fc229d 269 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 2 125 3.6E-40 T 12-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Vc3S01_2768 b073dcbb8fa524b872c09d8b53fc229d 269 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 150 167 - T 12-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Vc3S01_2768 b073dcbb8fa524b872c09d8b53fc229d 269 SUPERFAMILY SSF55347 127 236 1.46E-37 T 12-10-2018 Vc3S01_2768 b073dcbb8fa524b872c09d8b53fc229d 269 PIRSF PIRSF000161 1 268 5.7E-89 T 12-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Vc3S01_2768 b073dcbb8fa524b872c09d8b53fc229d 269 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 2 265 35.618 T 12-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Vc3S01_A0008 106097b55d50ff850b35dd160482d003 352 SUPERFAMILY SSF142695 152 322 6.02E-66 T 12-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Vc3S01_A0008 106097b55d50ff850b35dd160482d003 352 PIRSF PIRSF001259 1 352 2.5E-109 T 12-10-2018 Vc3S01_A0008 106097b55d50ff850b35dd160482d003 352 Gene3D G3DSA:1.10.357.40 2 151 9.6E-55 T 12-10-2018 IPR037238 YbiA-like superfamily Vc3S01_A0008 106097b55d50ff850b35dd160482d003 352 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 156 343 6.3E-83 T 12-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Vc3S01_A0008 106097b55d50ff850b35dd160482d003 352 TIGRFAM TIGR02464 ribofla_fusion: conserved hypothetical protein 5 144 1.0E-35 T 12-10-2018 IPR012816 NADAR Vc3S01_A0008 106097b55d50ff850b35dd160482d003 352 Pfam PF08719 Domain of unknown function (DUF1768) 7 145 1.0E-35 T 12-10-2018 IPR012816 NADAR Vc3S01_A0008 106097b55d50ff850b35dd160482d003 352 SUPERFAMILY SSF143990 4 145 1.44E-50 T 12-10-2018 IPR037238 YbiA-like superfamily Vc3S01_A0008 106097b55d50ff850b35dd160482d003 352 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 151 346 44.832 T 12-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Vc3S01_A0008 106097b55d50ff850b35dd160482d003 352 Gene3D G3DSA:3.40.50.10990 152 323 2.1E-73 T 12-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Vc3S01_A0008 106097b55d50ff850b35dd160482d003 352 Pfam PF00925 GTP cyclohydrolase II 158 320 3.4E-66 T 12-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Vc3S01_0106 c02cf4d484d6aba37cc128edc7fa24bd 385 Pfam PF00563 EAL domain 52 172 9.7E-13 T 12-10-2018 IPR001633 EAL domain Vc3S01_0106 c02cf4d484d6aba37cc128edc7fa24bd 385 SUPERFAMILY SSF109604 163 381 3.77E-39 T 12-10-2018 Vc3S01_0106 c02cf4d484d6aba37cc128edc7fa24bd 385 Gene3D G3DSA:3.20.20.450 28 180 1.7E-16 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_0106 c02cf4d484d6aba37cc128edc7fa24bd 385 Gene3D G3DSA:1.10.3210.10 181 346 1.3E-20 T 12-10-2018 Vc3S01_0106 c02cf4d484d6aba37cc128edc7fa24bd 385 Pfam PF08668 HDOD domain 186 302 1.5E-11 T 12-10-2018 IPR013976 Metal-dependent hydrolase HDOD Vc3S01_0106 c02cf4d484d6aba37cc128edc7fa24bd 385 SUPERFAMILY SSF141868 38 175 7.19E-21 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_0106 c02cf4d484d6aba37cc128edc7fa24bd 385 PIRSF PIRSF003180 1 385 7.9E-157 T 12-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing Vc3S01_1189 87486950d173de9b7152ac10048b175a 760 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 3 758 35.864 T 12-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 Vc3S01_1189 87486950d173de9b7152ac10048b175a 760 SUPERFAMILY SSF51726 396 757 3.01E-114 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Vc3S01_1189 87486950d173de9b7152ac10048b175a 760 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 5 315 6.7E-120 T 12-10-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 Vc3S01_1189 87486950d173de9b7152ac10048b175a 760 PIRSF PIRSF000382 2 760 0.0 T 12-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 Vc3S01_1189 87486950d173de9b7152ac10048b175a 760 Gene3D G3DSA:3.20.20.210 7 524 0.0 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Vc3S01_1189 87486950d173de9b7152ac10048b175a 760 SUPERFAMILY SSF51726 5 393 6.67E-111 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Vc3S01_1189 87486950d173de9b7152ac10048b175a 760 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 431 753 1.0E-149 T 12-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 Vc3S01_1189 87486950d173de9b7152ac10048b175a 760 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 8 757 0.0 T 12-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 Vc3S01_1189 87486950d173de9b7152ac10048b175a 760 Gene3D G3DSA:3.20.20.210 389 756 0.0 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Vc3S01_0153 5958b5a0ec85169d1ed5b47906b0d23e 307 Gene3D G3DSA:3.40.50.300 1 307 2.6E-93 T 12-10-2018 Vc3S01_0153 5958b5a0ec85169d1ed5b47906b0d23e 307 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 82 232 5.9E-13 T 12-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 Vc3S01_0153 5958b5a0ec85169d1ed5b47906b0d23e 307 Hamap MF_00215 Pantothenate kinase [coaA]. 1 307 178.332 T 12-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 Vc3S01_0153 5958b5a0ec85169d1ed5b47906b0d23e 307 PIRSF PIRSF000545 1 307 8.2E-145 T 12-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 Vc3S01_0153 5958b5a0ec85169d1ed5b47906b0d23e 307 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 3 307 1.2E-143 T 12-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 Vc3S01_0153 5958b5a0ec85169d1ed5b47906b0d23e 307 SUPERFAMILY SSF52540 3 306 3.18E-73 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_1007 33c1d8d9fe8b59032a3357cf6b818074 856 SUPERFAMILY SSF52540 270 839 4.44E-21 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_1007 33c1d8d9fe8b59032a3357cf6b818074 856 Gene3D G3DSA:3.40.50.300 268 448 9.3E-7 T 12-10-2018 Vc3S01_2641 d7bada47e0324d8ae17c9edff755e1d8 404 Pfam PF00266 Aminotransferase class-V 5 368 2.7E-89 T 12-10-2018 IPR000192 Aminotransferase class V domain Vc3S01_2641 d7bada47e0324d8ae17c9edff755e1d8 404 Gene3D G3DSA:3.90.1150.10 5 375 1.6E-168 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Vc3S01_2641 d7bada47e0324d8ae17c9edff755e1d8 404 Gene3D G3DSA:3.40.640.10 16 262 1.6E-168 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Vc3S01_2641 d7bada47e0324d8ae17c9edff755e1d8 404 PIRSF PIRSF005572 2 384 3.2E-137 T 12-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 Vc3S01_2641 d7bada47e0324d8ae17c9edff755e1d8 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 12-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site Vc3S01_2641 d7bada47e0324d8ae17c9edff755e1d8 404 SUPERFAMILY SSF53383 5 391 4.65E-116 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Vc3S01_2641 d7bada47e0324d8ae17c9edff755e1d8 404 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 404 1.2E-228 T 12-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 Vc3S01_2641 d7bada47e0324d8ae17c9edff755e1d8 404 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 395 54.275 T 12-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 Vc3S01_2813 8dcbfcdf0787d4594446d7d60faf04dc 510 SMART SM00880 234 502 1.5E-16 T 12-10-2018 IPR007899 CHAD domain Vc3S01_2813 8dcbfcdf0787d4594446d7d60faf04dc 510 Gene3D G3DSA:2.40.320.10 1 203 2.0E-35 T 12-10-2018 Vc3S01_2813 8dcbfcdf0787d4594446d7d60faf04dc 510 Pfam PF05235 CHAD domain 237 436 3.9E-6 T 12-10-2018 IPR007899 CHAD domain Vc3S01_2813 8dcbfcdf0787d4594446d7d60faf04dc 510 Gene3D G3DSA:1.40.20.10 217 449 4.7E-9 T 12-10-2018 IPR038186 CHAD domain superfamily Vc3S01_2813 8dcbfcdf0787d4594446d7d60faf04dc 510 SUPERFAMILY SSF55154 1 224 4.91E-51 T 12-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 Vc3S01_2813 8dcbfcdf0787d4594446d7d60faf04dc 510 SMART SM01118 2 208 1.2E-42 T 12-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 Vc3S01_2813 8dcbfcdf0787d4594446d7d60faf04dc 510 Pfam PF01928 CYTH domain 3 202 3.8E-32 T 12-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 Vc3S01_2259 e7bbef66376cd4ea42c93178c13e8238 252 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 248 46.93 T 12-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 Vc3S01_2259 e7bbef66376cd4ea42c93178c13e8238 252 Gene3D G3DSA:3.90.550.10 1 252 2.7E-98 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Vc3S01_2259 e7bbef66376cd4ea42c93178c13e8238 252 Pfam PF02348 Cytidylyltransferase 5 221 2.5E-66 T 12-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 Vc3S01_2259 e7bbef66376cd4ea42c93178c13e8238 252 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 241 6.0E-119 T 12-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 Vc3S01_2259 e7bbef66376cd4ea42c93178c13e8238 252 SUPERFAMILY SSF53448 1 249 7.89E-64 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Vc3S01_A1500 fee0d7db56ac385299df01d0886f26dc 396 Pfam PF07690 Major Facilitator Superfamily 17 349 2.8E-45 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Vc3S01_A1500 fee0d7db56ac385299df01d0886f26dc 396 SUPERFAMILY SSF103473 4 381 6.67E-56 T 12-10-2018 IPR036259 MFS transporter superfamily Vc3S01_A1500 fee0d7db56ac385299df01d0886f26dc 396 Gene3D G3DSA:1.20.1720.10 6 380 4.5E-85 T 12-10-2018 Vc3S01_A1500 fee0d7db56ac385299df01d0886f26dc 396 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 6 378 4.9E-60 T 12-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 Vc3S01_A1432 06ce3e03be28f38da7bd5fef4e5d43dc 413 SUPERFAMILY SSF52540 152 379 6.08E-19 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A1432 06ce3e03be28f38da7bd5fef4e5d43dc 413 Gene3D G3DSA:3.40.50.300 151 395 1.9E-19 T 12-10-2018 Vc3S01_A1432 06ce3e03be28f38da7bd5fef4e5d43dc 413 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 156 355 4.9E-7 T 12-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Vc3S01_A1432 06ce3e03be28f38da7bd5fef4e5d43dc 413 Gene3D G3DSA:3.40.50.2300 22 144 1.3E-5 T 12-10-2018 Vc3S01_2469 7cc6ee98b8dac545def4101c76f82330 249 Pfam PF00460 Flagella basal body rod protein 8 35 2.0E-5 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Vc3S01_2469 7cc6ee98b8dac545def4101c76f82330 249 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 121 7.9E-33 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Vc3S01_2469 7cc6ee98b8dac545def4101c76f82330 249 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 172 242 1.1E-21 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Vc3S01_2469 7cc6ee98b8dac545def4101c76f82330 249 SUPERFAMILY SSF117143 77 207 5.36E-16 T 12-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like Vc3S01_1886 b6bde30f6188ff99481c8ccdc78d698a 94 PIRSF PIRSF036521 1 94 1.5E-7 T 12-10-2018 IPR011411 NTP Pyrophosphohydrolase MazG-related Vc3S01_1886 b6bde30f6188ff99481c8ccdc78d698a 94 SUPERFAMILY SSF101386 1 93 7.03E-20 T 12-10-2018 Vc3S01_1886 b6bde30f6188ff99481c8ccdc78d698a 94 Gene3D G3DSA:1.10.287.1080 1 94 8.3E-28 T 12-10-2018 Vc3S01_1886 b6bde30f6188ff99481c8ccdc78d698a 94 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 21 81 1.7E-8 T 12-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core Vc3S01_A0811 fa44df1c7bd60ad015f6afee2cf239d2 264 SUPERFAMILY SSF46689 213 262 1.14E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_A0811 fa44df1c7bd60ad015f6afee2cf239d2 264 Pfam PF12833 Helix-turn-helix domain 183 260 4.8E-18 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_A0811 fa44df1c7bd60ad015f6afee2cf239d2 264 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 213 255 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Vc3S01_A0811 fa44df1c7bd60ad015f6afee2cf239d2 264 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 228 243 1.0E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Vc3S01_A0811 fa44df1c7bd60ad015f6afee2cf239d2 264 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 243 259 1.0E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Vc3S01_A0811 fa44df1c7bd60ad015f6afee2cf239d2 264 SMART SM00342 177 259 8.9E-26 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_A0811 fa44df1c7bd60ad015f6afee2cf239d2 264 Gene3D G3DSA:1.10.10.60 158 264 1.7E-27 T 12-10-2018 Vc3S01_0528 cb313ce3f6466ede55adf98a9c28f2d2 347 Gene3D G3DSA:3.30.2340.10 170 302 9.9E-107 T 12-10-2018 Vc3S01_0528 cb313ce3f6466ede55adf98a9c28f2d2 347 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 9 171 2.8E-42 T 12-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 Vc3S01_0528 cb313ce3f6466ede55adf98a9c28f2d2 347 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 186 337 1.3E-22 T 12-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 Vc3S01_0528 cb313ce3f6466ede55adf98a9c28f2d2 347 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 78 91 - T 12-10-2018 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 Vc3S01_0528 cb313ce3f6466ede55adf98a9c28f2d2 347 Gene3D G3DSA:3.30.2350.20 18 337 9.9E-107 T 12-10-2018 Vc3S01_0528 cb313ce3f6466ede55adf98a9c28f2d2 347 TIGRFAM TIGR00094 tRNA_TruD_broad: tRNA pseudouridine synthase, TruD family 9 282 1.1E-56 T 12-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 Vc3S01_0528 cb313ce3f6466ede55adf98a9c28f2d2 347 SUPERFAMILY SSF55120 6 338 2.45E-97 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Vc3S01_0528 cb313ce3f6466ede55adf98a9c28f2d2 347 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 6 342 28.557 T 12-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 Vc3S01_A2006 0258c1a670afc0f853bbeec787312f72 433 PIRSF PIRSF006066 4 433 2.9E-167 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Vc3S01_A2006 0258c1a670afc0f853bbeec787312f72 433 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 20 427 1.2E-138 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Vc3S01_A2006 0258c1a670afc0f853bbeec787312f72 433 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 10 422 5.1E-116 T 12-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Vc3S01_2782 a6c0ae013a2bc96adff425788d6e5aa2 493 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 25 488 1.8E-167 T 12-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 Vc3S01_2782 a6c0ae013a2bc96adff425788d6e5aa2 493 Pfam PF02875 Mur ligase family, glutamate ligase domain 339 422 2.1E-24 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Vc3S01_2782 a6c0ae013a2bc96adff425788d6e5aa2 493 Gene3D G3DSA:3.40.1190.10 108 339 2.2E-77 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Vc3S01_2782 a6c0ae013a2bc96adff425788d6e5aa2 493 SUPERFAMILY SSF63418 10 105 1.44E-20 T 12-10-2018 IPR035911 MurE/MurF, N-terminal Vc3S01_2782 a6c0ae013a2bc96adff425788d6e5aa2 493 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 5 489 33.437 T 12-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 Vc3S01_2782 a6c0ae013a2bc96adff425788d6e5aa2 493 Gene3D G3DSA:3.40.1390.10 4 106 9.4E-26 T 12-10-2018 Vc3S01_2782 a6c0ae013a2bc96adff425788d6e5aa2 493 SUPERFAMILY SSF53244 338 489 6.26E-48 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Vc3S01_2782 a6c0ae013a2bc96adff425788d6e5aa2 493 Pfam PF08245 Mur ligase middle domain 115 315 4.0E-49 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Vc3S01_2782 a6c0ae013a2bc96adff425788d6e5aa2 493 Pfam PF01225 Mur ligase family, catalytic domain 26 103 5.5E-11 T 12-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 Vc3S01_2782 a6c0ae013a2bc96adff425788d6e5aa2 493 SUPERFAMILY SSF53623 109 336 6.02E-72 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Vc3S01_2782 a6c0ae013a2bc96adff425788d6e5aa2 493 Gene3D G3DSA:3.90.190.20 340 491 2.6E-54 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Vc3S01_0514 6702bfa768b7833b4f116a216b32738b 225 Hamap MF_00104 Ribonuclease 3 [rnc]. 8 219 29.891 T 12-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 Vc3S01_0514 6702bfa768b7833b4f116a216b32738b 225 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 8 222 1.3E-74 T 12-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 Vc3S01_0514 6702bfa768b7833b4f116a216b32738b 225 Pfam PF00035 Double-stranded RNA binding motif 155 222 2.1E-15 T 12-10-2018 IPR014720 Double-stranded RNA-binding domain Vc3S01_0514 6702bfa768b7833b4f116a216b32738b 225 Pfam PF14622 Ribonuclease-III-like 20 140 8.0E-33 T 12-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 Vc3S01_0514 6702bfa768b7833b4f116a216b32738b 225 ProSitePatterns PS00517 Ribonuclease III family signature. 37 45 - T 12-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 Vc3S01_0514 6702bfa768b7833b4f116a216b32738b 225 Gene3D G3DSA:1.10.1520.10 1 146 3.2E-44 T 12-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 Vc3S01_0514 6702bfa768b7833b4f116a216b32738b 225 SMART SM00358 155 223 4.5E-22 T 12-10-2018 IPR014720 Double-stranded RNA-binding domain Vc3S01_0514 6702bfa768b7833b4f116a216b32738b 225 SUPERFAMILY SSF54768 108 222 1.89E-28 T 12-10-2018 Vc3S01_0514 6702bfa768b7833b4f116a216b32738b 225 Gene3D G3DSA:3.30.160.20 153 224 1.2E-19 T 12-10-2018 Vc3S01_0514 6702bfa768b7833b4f116a216b32738b 225 SMART SM00535 20 148 8.9E-55 T 12-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 Vc3S01_0514 6702bfa768b7833b4f116a216b32738b 225 SUPERFAMILY SSF69065 4 158 1.08E-49 T 12-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 Vc3S01_2039 023b7e00f22012ffdcf5008238a672ab 275 Pfam PF13460 NAD(P)H-binding 9 185 3.5E-16 T 12-10-2018 IPR016040 NAD(P)-binding domain Vc3S01_2039 023b7e00f22012ffdcf5008238a672ab 275 Gene3D G3DSA:3.40.50.720 1 275 7.9E-46 T 12-10-2018 Vc3S01_2039 023b7e00f22012ffdcf5008238a672ab 275 SUPERFAMILY SSF51735 8 268 9.44E-28 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_1484 da0b19f7b97c6a80928f9320bed221c9 490 SMART SM00999 117 476 4.5E-278 T 12-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 Vc3S01_1484 da0b19f7b97c6a80928f9320bed221c9 490 PRINTS PR00754 Aerolysin signature 379 398 4.7E-74 T 12-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 Vc3S01_1484 da0b19f7b97c6a80928f9320bed221c9 490 PRINTS PR00754 Aerolysin signature 262 286 4.7E-74 T 12-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 Vc3S01_1484 da0b19f7b97c6a80928f9320bed221c9 490 PRINTS PR00754 Aerolysin signature 401 419 4.7E-74 T 12-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 Vc3S01_1484 da0b19f7b97c6a80928f9320bed221c9 490 PRINTS PR00754 Aerolysin signature 63 82 4.7E-74 T 12-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 Vc3S01_1484 da0b19f7b97c6a80928f9320bed221c9 490 PRINTS PR00754 Aerolysin signature 138 160 4.7E-74 T 12-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 Vc3S01_1484 da0b19f7b97c6a80928f9320bed221c9 490 PRINTS PR00754 Aerolysin signature 334 357 4.7E-74 T 12-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 Vc3S01_1484 da0b19f7b97c6a80928f9320bed221c9 490 PRINTS PR00754 Aerolysin signature 44 62 4.7E-74 T 12-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 Vc3S01_1484 da0b19f7b97c6a80928f9320bed221c9 490 PRINTS PR00754 Aerolysin signature 420 439 4.7E-74 T 12-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 Vc3S01_1484 da0b19f7b97c6a80928f9320bed221c9 490 Pfam PF03440 Aerolysin/Pertussis toxin (APT) domain 25 100 4.4E-17 T 12-10-2018 IPR005138 Aerolysin/Pertussis toxin domain Vc3S01_1484 da0b19f7b97c6a80928f9320bed221c9 490 Gene3D G3DSA:3.30.412.10 120 417 4.2E-140 T 12-10-2018 Vc3S01_1484 da0b19f7b97c6a80928f9320bed221c9 490 Gene3D G3DSA:3.10.40.10 22 111 1.6E-35 T 12-10-2018 IPR037015 Aerolysin/Pertussis toxin (APT), N-terminal domain superfamily Vc3S01_1484 da0b19f7b97c6a80928f9320bed221c9 490 SUPERFAMILY SSF56436 24 105 8.79E-33 T 12-10-2018 IPR016187 C-type lectin fold Vc3S01_1484 da0b19f7b97c6a80928f9320bed221c9 490 SUPERFAMILY SSF56973 108 453 1.31E-95 T 12-10-2018 Vc3S01_1484 da0b19f7b97c6a80928f9320bed221c9 490 Pfam PF01117 Aerolysin toxin 120 473 1.4E-119 T 12-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 Vc3S01_1484 da0b19f7b97c6a80928f9320bed221c9 490 Gene3D G3DSA:2.170.15.10 198 442 4.2E-140 T 12-10-2018 Vc3S01_A1025 5325c4c04ca8c2678a54d9fcc72e161f 207 SMART SM00530 31 86 2.6E-13 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Vc3S01_A1025 5325c4c04ca8c2678a54d9fcc72e161f 207 Pfam PF01381 Helix-turn-helix 32 84 2.7E-12 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Vc3S01_A1025 5325c4c04ca8c2678a54d9fcc72e161f 207 Gene3D G3DSA:1.10.260.40 26 93 7.2E-16 T 12-10-2018 Vc3S01_A1025 5325c4c04ca8c2678a54d9fcc72e161f 207 SUPERFAMILY SSF47413 26 90 4.29E-15 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Vc3S01_A1025 5325c4c04ca8c2678a54d9fcc72e161f 207 SUPERFAMILY SSF51182 97 204 1.34E-25 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily Vc3S01_A1025 5325c4c04ca8c2678a54d9fcc72e161f 207 Gene3D G3DSA:2.60.120.10 94 205 2.3E-26 T 12-10-2018 IPR014710 RmlC-like jelly roll fold Vc3S01_A1025 5325c4c04ca8c2678a54d9fcc72e161f 207 Pfam PF07883 Cupin domain 147 204 8.5E-11 T 12-10-2018 IPR013096 Cupin 2, conserved barrel Vc3S01_A1118 031eb32cba70e62016d800128c6930ed 518 SMART SM01002 152 317 2.3E-81 T 12-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain Vc3S01_A1118 031eb32cba70e62016d800128c6930ed 518 Gene3D G3DSA:3.40.50.720 143 324 1.8E-156 T 12-10-2018 Vc3S01_A1118 031eb32cba70e62016d800128c6930ed 518 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 433 516 2.0E-36 T 12-10-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 Vc3S01_A1118 031eb32cba70e62016d800128c6930ed 518 SUPERFAMILY SSF52283 2 174 9.35E-52 T 12-10-2018 Vc3S01_A1118 031eb32cba70e62016d800128c6930ed 518 PIRSF PIRSF000203 1 516 7.9E-270 T 12-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 Vc3S01_A1118 031eb32cba70e62016d800128c6930ed 518 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 12-10-2018 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 Reactome: R-HSA-71403 Vc3S01_A1118 031eb32cba70e62016d800128c6930ed 518 SUPERFAMILY SSF51735 143 319 6.09E-36 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_A1118 031eb32cba70e62016d800128c6930ed 518 SMART SM01003 4 143 1.5E-68 T 12-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal Vc3S01_A1118 031eb32cba70e62016d800128c6930ed 518 Gene3D G3DSA:3.40.50.720 3 371 1.8E-156 T 12-10-2018 Vc3S01_A1118 031eb32cba70e62016d800128c6930ed 518 TIGRFAM TIGR00561 pntA: NAD(P)(+) transhydrogenase (AB-specific), alpha subunit 2 516 1.7E-271 T 12-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 Vc3S01_A1118 031eb32cba70e62016d800128c6930ed 518 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 143 1.2E-46 T 12-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal Vc3S01_A1118 031eb32cba70e62016d800128c6930ed 518 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 147 374 1.3E-73 T 12-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain Vc3S01_p20165 fea452b771e1f921927be9b2d5c8c04b 404 Pfam PF07690 Major Facilitator Superfamily 24 355 6.4E-34 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Vc3S01_p20165 fea452b771e1f921927be9b2d5c8c04b 404 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 14 390 4.0E-95 T 12-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 Vc3S01_p20165 fea452b771e1f921927be9b2d5c8c04b 404 SUPERFAMILY SSF103473 8 394 6.54E-49 T 12-10-2018 IPR036259 MFS transporter superfamily Vc3S01_p20165 fea452b771e1f921927be9b2d5c8c04b 404 Gene3D G3DSA:1.20.1720.10 15 390 4.3E-77 T 12-10-2018 Vc3S01_1191 d9d866306fb76f4aff9f4301200f8c0a 98 Gene3D G3DSA:3.30.70.1060 1 98 7.6E-39 T 12-10-2018 Vc3S01_1191 d9d866306fb76f4aff9f4301200f8c0a 98 SUPERFAMILY SSF54909 1 98 1.2E-32 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel Vc3S01_1191 d9d866306fb76f4aff9f4301200f8c0a 98 Pfam PF03795 YCII-related domain 1 95 3.5E-31 T 12-10-2018 IPR005545 YCII-related Vc3S01_A1464 6f5e9dc7b68d007e8397b716e10ad34e 701 Pfam PF16130 Domain of unknown function (DUF4842) 473 690 3.9E-60 T 12-10-2018 IPR032295 Domain of unknown function DUF4842 Vc3S01_A1464 6f5e9dc7b68d007e8397b716e10ad34e 701 TIGRFAM TIGR04456 LruC_dom: LruC domain 440 691 3.4E-86 T 12-10-2018 IPR031025 LruC domain Vc3S01_A1464 6f5e9dc7b68d007e8397b716e10ad34e 701 SUPERFAMILY SSF101898 43 230 1.15E-13 T 12-10-2018 Vc3S01_A0150 aac3499280cbdfc082cb0cf91ccc47d5 377 SUPERFAMILY SSF56281 95 352 1.97E-32 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Vc3S01_A0150 aac3499280cbdfc082cb0cf91ccc47d5 377 Gene3D G3DSA:3.60.15.10 76 374 1.8E-75 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Vc3S01_A0150 aac3499280cbdfc082cb0cf91ccc47d5 377 Pfam PF12706 Beta-lactamase superfamily domain 113 314 3.1E-41 T 12-10-2018 IPR001279 Metallo-beta-lactamase Vc3S01_2038 38abcfc62238fb97679cb8e6e2d22760 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.6E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_2038 38abcfc62238fb97679cb8e6e2d22760 290 Pfam PF03466 LysR substrate binding domain 90 249 5.5E-16 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_2038 38abcfc62238fb97679cb8e6e2d22760 290 SUPERFAMILY SSF46785 3 85 6.68E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_2038 38abcfc62238fb97679cb8e6e2d22760 290 Gene3D G3DSA:3.40.190.290 93 288 1.2E-33 T 12-10-2018 Vc3S01_2038 38abcfc62238fb97679cb8e6e2d22760 290 SUPERFAMILY SSF53850 90 288 1.57E-21 T 12-10-2018 Vc3S01_2038 38abcfc62238fb97679cb8e6e2d22760 290 Gene3D G3DSA:1.10.10.10 2 86 8.3E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_3200 bab8d167dccc671f3f62714dde412c56 401 SUPERFAMILY SSF103473 5 378 1.96E-51 T 12-10-2018 IPR036259 MFS transporter superfamily Vc3S01_3200 bab8d167dccc671f3f62714dde412c56 401 Gene3D G3DSA:1.20.1720.10 8 377 1.7E-73 T 12-10-2018 Vc3S01_3200 bab8d167dccc671f3f62714dde412c56 401 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 4 368 2.3E-82 T 12-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 Vc3S01_3200 bab8d167dccc671f3f62714dde412c56 401 Pfam PF07690 Major Facilitator Superfamily 13 349 1.8E-35 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Vc3S01_2105 331f6f25f798804d89516da442c5573f 233 Pfam PF06267 Family of unknown function (DUF1028) 2 208 4.9E-44 T 12-10-2018 IPR010430 Protein of unknown function DUF1028 Vc3S01_2105 331f6f25f798804d89516da442c5573f 233 Gene3D G3DSA:3.60.20.10 1 233 2.3E-50 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Vc3S01_2105 331f6f25f798804d89516da442c5573f 233 SUPERFAMILY SSF56235 1 231 1.93E-56 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Vc3S01_1761 6170d0df71c11c701e2a9174c8e6359d 311 ProSitePatterns PS01125 ROK family signature. 140 167 - T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Vc3S01_1761 6170d0df71c11c701e2a9174c8e6359d 311 Pfam PF00480 ROK family 6 299 2.9E-44 T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Vc3S01_1761 6170d0df71c11c701e2a9174c8e6359d 311 Gene3D G3DSA:3.30.420.40 6 297 1.9E-67 T 12-10-2018 Vc3S01_1761 6170d0df71c11c701e2a9174c8e6359d 311 Gene3D G3DSA:3.30.420.40 131 285 1.9E-67 T 12-10-2018 Vc3S01_1761 6170d0df71c11c701e2a9174c8e6359d 311 SUPERFAMILY SSF53067 4 304 2.81E-51 T 12-10-2018 Vc3S01_0320 9a851cedb082b6e62d6801c543d77083 580 PRINTS PR00811 Bacterial general secretion pathway protein D signature 543 561 7.7E-20 T 12-10-2018 IPR001775 GspD/PilQ family Vc3S01_0320 9a851cedb082b6e62d6801c543d77083 580 PRINTS PR00811 Bacterial general secretion pathway protein D signature 451 461 7.7E-20 T 12-10-2018 IPR001775 GspD/PilQ family Vc3S01_0320 9a851cedb082b6e62d6801c543d77083 580 PRINTS PR00811 Bacterial general secretion pathway protein D signature 566 580 7.7E-20 T 12-10-2018 IPR001775 GspD/PilQ family Vc3S01_0320 9a851cedb082b6e62d6801c543d77083 580 PRINTS PR00811 Bacterial general secretion pathway protein D signature 321 331 7.7E-20 T 12-10-2018 IPR001775 GspD/PilQ family Vc3S01_0320 9a851cedb082b6e62d6801c543d77083 580 PRINTS PR00811 Bacterial general secretion pathway protein D signature 416 440 7.7E-20 T 12-10-2018 IPR001775 GspD/PilQ family Vc3S01_0320 9a851cedb082b6e62d6801c543d77083 580 SMART SM00965 182 230 2.2E-9 T 12-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 Vc3S01_0320 9a851cedb082b6e62d6801c543d77083 580 Gene3D G3DSA:2.60.40.3470 26 139 3.5E-14 T 12-10-2018 Vc3S01_0320 9a851cedb082b6e62d6801c543d77083 580 Pfam PF00263 Bacterial type II and III secretion system protein 420 578 3.6E-46 T 12-10-2018 IPR004846 Type II/III secretion system GO:0009306 Vc3S01_0320 9a851cedb082b6e62d6801c543d77083 580 Gene3D G3DSA:3.55.50.30 140 253 3.6E-36 T 12-10-2018 Vc3S01_0320 9a851cedb082b6e62d6801c543d77083 580 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 157 578 5.7E-164 T 12-10-2018 IPR013355 Type IV pilus secretin PilQ Vc3S01_0320 9a851cedb082b6e62d6801c543d77083 580 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 524 557 - T 12-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 Vc3S01_0320 9a851cedb082b6e62d6801c543d77083 580 Gene3D G3DSA:3.30.1370.120 254 317 9.2E-12 T 12-10-2018 IPR038591 NolW-like superfamily Vc3S01_0320 9a851cedb082b6e62d6801c543d77083 580 Pfam PF03958 Bacterial type II/III secretion system short domain 256 321 8.3E-13 T 12-10-2018 IPR005644 NolW-like Vc3S01_1199 0fa8aabe8a95eeb5b219fa9d49d6c259 396 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 79 93 - T 12-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Vc3S01_1199 0fa8aabe8a95eeb5b219fa9d49d6c259 396 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 6 388 2.5E-194 T 12-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Vc3S01_1199 0fa8aabe8a95eeb5b219fa9d49d6c259 396 PIRSF PIRSF001413 1 396 5.2E-168 T 12-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Vc3S01_1199 0fa8aabe8a95eeb5b219fa9d49d6c259 396 Gene3D G3DSA:3.40.50.1100 53 383 1.7E-183 T 12-10-2018 Vc3S01_1199 0fa8aabe8a95eeb5b219fa9d49d6c259 396 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 51 373 1.3E-48 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Vc3S01_1199 0fa8aabe8a95eeb5b219fa9d49d6c259 396 SUPERFAMILY SSF53686 5 387 2.49E-141 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Vc3S01_1199 0fa8aabe8a95eeb5b219fa9d49d6c259 396 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 1 390 49.956 T 12-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Vc3S01_1199 0fa8aabe8a95eeb5b219fa9d49d6c259 396 Gene3D G3DSA:3.40.50.1100 9 204 1.7E-183 T 12-10-2018 Vc3S01_2674 faeafc882f1724108d93538287e87594 84 Pfam PF00037 4Fe-4S binding domain 5 25 5.8E-6 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Vc3S01_2674 faeafc882f1724108d93538287e87594 84 SUPERFAMILY SSF54862 4 72 4.93E-17 T 12-10-2018 Vc3S01_2674 faeafc882f1724108d93538287e87594 84 Gene3D G3DSA:3.30.70.20 2 83 1.6E-33 T 12-10-2018 Vc3S01_2674 faeafc882f1724108d93538287e87594 84 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Vc3S01_0157 1fd1bdd1f016a744bb714c8f5c6c6de1 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 1.5E-23 T 12-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 Vc3S01_0157 1fd1bdd1f016a744bb714c8f5c6c6de1 142 SMART SM00649 9 141 2.4E-82 T 12-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 Vc3S01_0157 1fd1bdd1f016a744bb714c8f5c6c6de1 142 Gene3D G3DSA:3.30.1550.10 2 72 3.3E-34 T 12-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily Vc3S01_0157 1fd1bdd1f016a744bb714c8f5c6c6de1 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 12-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_0157 1fd1bdd1f016a744bb714c8f5c6c6de1 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.534 T 12-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 Vc3S01_0157 1fd1bdd1f016a744bb714c8f5c6c6de1 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 4.7E-64 T 12-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_0157 1fd1bdd1f016a744bb714c8f5c6c6de1 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 1.0E-29 T 12-10-2018 IPR020784 Ribosomal protein L11, N-terminal Vc3S01_0157 1fd1bdd1f016a744bb714c8f5c6c6de1 142 SUPERFAMILY SSF54747 3 73 4.84E-30 T 12-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily Vc3S01_0157 1fd1bdd1f016a744bb714c8f5c6c6de1 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 71 2.0E-14 T 12-10-2018 Vc3S01_0157 1fd1bdd1f016a744bb714c8f5c6c6de1 142 SUPERFAMILY SSF46906 68 141 2.88E-25 T 12-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily Vc3S01_0157 1fd1bdd1f016a744bb714c8f5c6c6de1 142 Gene3D G3DSA:1.10.10.250 73 141 1.1E-25 T 12-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily Vc3S01_2837 12ea87fae549626c56c6d78bc8217f16 382 Hamap MF_00196 Mannitol-1-phosphate 5-dehydrogenase [mtlD]. 2 379 41.031 T 12-10-2018 IPR023028 Mannitol-1-phosphate 5-dehydrogenase GO:0008926|GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 Vc3S01_2837 12ea87fae549626c56c6d78bc8217f16 382 Gene3D G3DSA:1.10.1040.10 208 382 4.3E-64 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Vc3S01_2837 12ea87fae549626c56c6d78bc8217f16 382 SUPERFAMILY SSF48179 205 382 3.03E-45 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Vc3S01_2837 12ea87fae549626c56c6d78bc8217f16 382 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 3 124 2.0E-23 T 12-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 Vc3S01_2837 12ea87fae549626c56c6d78bc8217f16 382 SUPERFAMILY SSF51735 3 203 3.15E-42 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_2837 12ea87fae549626c56c6d78bc8217f16 382 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 151 163 - T 12-10-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 Vc3S01_2837 12ea87fae549626c56c6d78bc8217f16 382 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 151 375 7.5E-58 T 12-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 Vc3S01_2837 12ea87fae549626c56c6d78bc8217f16 382 Gene3D G3DSA:3.40.50.720 2 206 3.2E-79 T 12-10-2018 Vc3S01_2837 12ea87fae549626c56c6d78bc8217f16 382 PRINTS PR00084 Mannitol dehydrogenase signature 115 128 7.7E-18 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 Vc3S01_2837 12ea87fae549626c56c6d78bc8217f16 382 PRINTS PR00084 Mannitol dehydrogenase signature 151 164 7.7E-18 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 Vc3S01_2837 12ea87fae549626c56c6d78bc8217f16 382 PRINTS PR00084 Mannitol dehydrogenase signature 4 14 7.7E-18 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 Vc3S01_2837 12ea87fae549626c56c6d78bc8217f16 382 PRINTS PR00084 Mannitol dehydrogenase signature 171 186 7.7E-18 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 Vc3S01_1167 6f23e62ce8cd841449358ca598ace58e 298 Gene3D G3DSA:3.40.50.1100 14 284 4.0E-24 T 12-10-2018 Vc3S01_1167 6f23e62ce8cd841449358ca598ace58e 298 PIRSF PIRSF006278 2 296 1.4E-23 T 12-10-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase Vc3S01_1167 6f23e62ce8cd841449358ca598ace58e 298 SUPERFAMILY SSF53686 9 295 1.02E-53 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Vc3S01_1167 6f23e62ce8cd841449358ca598ace58e 298 Gene3D G3DSA:3.40.50.1100 33 137 4.0E-24 T 12-10-2018 Vc3S01_A1097 8ec38641f66700ec19029779e25b46b8 338 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 334 8.0E-142 T 12-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 Vc3S01_A1097 8ec38641f66700ec19029779e25b46b8 338 SUPERFAMILY SSF51735 1 335 3.38E-99 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_A1097 8ec38641f66700ec19029779e25b46b8 338 Gene3D G3DSA:3.40.50.720 3 273 6.2E-141 T 12-10-2018 Vc3S01_A1097 8ec38641f66700ec19029779e25b46b8 338 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 323 9.9E-61 T 12-10-2018 IPR016040 NAD(P)-binding domain Vc3S01_A1097 8ec38641f66700ec19029779e25b46b8 338 PRINTS PR01713 Nucleotide sugar epimerase signature 294 311 2.0E-5 T 12-10-2018 Vc3S01_A1097 8ec38641f66700ec19029779e25b46b8 338 PRINTS PR01713 Nucleotide sugar epimerase signature 230 245 2.0E-5 T 12-10-2018 Vc3S01_A1097 8ec38641f66700ec19029779e25b46b8 338 PRINTS PR01713 Nucleotide sugar epimerase signature 255 270 2.0E-5 T 12-10-2018 Vc3S01_A1097 8ec38641f66700ec19029779e25b46b8 338 Gene3D G3DSA:3.90.25.10 193 328 6.2E-141 T 12-10-2018 Vc3S01_0591 ef364c3f646c32ab9b4dfe9f7325b957 409 TIGRFAM TIGR03644 marine_trans_1: probable ammonium transporter, marine subtype 12 405 1.3E-206 T 12-10-2018 IPR019879 Ammonium transporter, marine subtype Vc3S01_0591 ef364c3f646c32ab9b4dfe9f7325b957 409 ProSitePatterns PS01219 Ammonium transporters signature. 163 188 - T 12-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 Vc3S01_0591 ef364c3f646c32ab9b4dfe9f7325b957 409 SUPERFAMILY SSF111352 12 383 3.01E-105 T 12-10-2018 Vc3S01_0591 ef364c3f646c32ab9b4dfe9f7325b957 409 Gene3D G3DSA:1.10.3430.10 2 408 4.9E-119 T 12-10-2018 IPR029020 Ammonium/urea transporter Vc3S01_0591 ef364c3f646c32ab9b4dfe9f7325b957 409 Pfam PF00909 Ammonium Transporter Family 18 402 1.2E-99 T 12-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 Vc3S01_0242 99d8a0c1bdebac8714bbdfec6f7118d2 626 SMART SM00304 295 349 3.4E-10 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Vc3S01_0242 99d8a0c1bdebac8714bbdfec6f7118d2 626 SMART SM00283 364 625 2.3E-67 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Vc3S01_0242 99d8a0c1bdebac8714bbdfec6f7118d2 626 SUPERFAMILY SSF103190 65 174 6.36E-10 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Vc3S01_0242 99d8a0c1bdebac8714bbdfec6f7118d2 626 Pfam PF00672 HAMP domain 296 345 4.7E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Vc3S01_0242 99d8a0c1bdebac8714bbdfec6f7118d2 626 SUPERFAMILY SSF58104 317 626 4.84E-74 T 12-10-2018 Vc3S01_0242 99d8a0c1bdebac8714bbdfec6f7118d2 626 Gene3D G3DSA:3.30.450.20 51 269 4.9E-53 T 12-10-2018 Vc3S01_0242 99d8a0c1bdebac8714bbdfec6f7118d2 626 Gene3D G3DSA:1.10.287.950 294 626 3.3E-70 T 12-10-2018 Vc3S01_0242 99d8a0c1bdebac8714bbdfec6f7118d2 626 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 436 590 1.7E-40 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Vc3S01_0242 99d8a0c1bdebac8714bbdfec6f7118d2 626 Pfam PF02743 Cache domain 38 258 4.2E-27 T 12-10-2018 IPR033479 Double Cache domain 1 Vc3S01_0242 99d8a0c1bdebac8714bbdfec6f7118d2 626 Gene3D G3DSA:3.30.450.20 64 167 4.9E-53 T 12-10-2018 Vc3S01_A1965 8bd7d711ea4df705e983c7590859c91e 239 SMART SM00382 34 217 5.0E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_A1965 8bd7d711ea4df705e983c7590859c91e 239 SUPERFAMILY SSF52540 5 228 3.25E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A1965 8bd7d711ea4df705e983c7590859c91e 239 Pfam PF00005 ABC transporter 25 170 5.2E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_A1965 8bd7d711ea4df705e983c7590859c91e 239 Gene3D G3DSA:3.40.50.300 3 238 1.3E-59 T 12-10-2018 Vc3S01_A1965 8bd7d711ea4df705e983c7590859c91e 239 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_A0620 ccc11ee85b8dfae142d6bbd7325416d7 389 SUPERFAMILY SSF54631 81 213 1.16E-13 T 12-10-2018 Vc3S01_A0620 ccc11ee85b8dfae142d6bbd7325416d7 389 SUPERFAMILY SSF158791 2 75 1.44E-5 T 12-10-2018 Vc3S01_A0620 ccc11ee85b8dfae142d6bbd7325416d7 389 Pfam PF01769 Divalent cation transporter 260 381 1.3E-22 T 12-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 Vc3S01_A0620 ccc11ee85b8dfae142d6bbd7325416d7 389 Pfam PF03448 MgtE intracellular N domain 2 76 1.0E-6 T 12-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain Vc3S01_A0620 ccc11ee85b8dfae142d6bbd7325416d7 389 Gene3D G3DSA:1.10.357.20 215 388 5.4E-46 T 12-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain Vc3S01_A0620 ccc11ee85b8dfae142d6bbd7325416d7 389 SUPERFAMILY SSF161093 217 387 2.75E-46 T 12-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 Vc3S01_A0620 ccc11ee85b8dfae142d6bbd7325416d7 389 Gene3D G3DSA:3.10.580.10 74 199 9.8E-34 T 12-10-2018 Vc3S01_3204 278284f081677a0ef80eafb666542c11 140 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 4 132 20.746 T 12-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_3204 278284f081677a0ef80eafb666542c11 140 Gene3D G3DSA:2.60.15.10 4 91 2.5E-31 T 12-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_3204 278284f081677a0ef80eafb666542c11 140 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 89 134 6.6E-12 T 12-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Vc3S01_3204 278284f081677a0ef80eafb666542c11 140 SUPERFAMILY SSF51344 5 87 3.79E-24 T 12-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_3204 278284f081677a0ef80eafb666542c11 140 Gene3D G3DSA:1.20.5.440 92 135 2.5E-19 T 12-10-2018 Vc3S01_3204 278284f081677a0ef80eafb666542c11 140 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 5 134 8.6E-44 T 12-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_3204 278284f081677a0ef80eafb666542c11 140 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 11 91 7.0E-41 T 12-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_3204 278284f081677a0ef80eafb666542c11 140 SUPERFAMILY SSF46604 89 138 1.49E-14 T 12-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_3204 278284f081677a0ef80eafb666542c11 140 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 85 8.3E-29 T 12-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_A1782 77c349e869e0c374fc13b6b8f259f512 318 SUPERFAMILY SSF56281 35 306 1.9E-37 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Vc3S01_A1782 77c349e869e0c374fc13b6b8f259f512 318 Gene3D G3DSA:3.60.15.10 34 317 4.4E-39 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Vc3S01_A1782 77c349e869e0c374fc13b6b8f259f512 318 Pfam PF12706 Beta-lactamase superfamily domain 63 274 7.7E-12 T 12-10-2018 IPR001279 Metallo-beta-lactamase Vc3S01_0324 527e6f2e6fe02adaae17fd8d8c5007cc 279 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 252 2.1E-67 T 12-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 Vc3S01_0324 527e6f2e6fe02adaae17fd8d8c5007cc 279 Gene3D G3DSA:1.10.1020.10 57 156 2.1E-83 T 12-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 Vc3S01_0324 527e6f2e6fe02adaae17fd8d8c5007cc 279 TIGRFAM TIGR00571 dam: DNA adenine methylase 5 268 2.8E-94 T 12-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 Vc3S01_0324 527e6f2e6fe02adaae17fd8d8c5007cc 279 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 178 184 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Vc3S01_0324 527e6f2e6fe02adaae17fd8d8c5007cc 279 SUPERFAMILY SSF53335 5 268 9.69E-76 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Vc3S01_0324 527e6f2e6fe02adaae17fd8d8c5007cc 279 Gene3D G3DSA:3.40.50.150 7 239 2.1E-83 T 12-10-2018 Vc3S01_0324 527e6f2e6fe02adaae17fd8d8c5007cc 279 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 3.9E-18 T 12-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 Vc3S01_0324 527e6f2e6fe02adaae17fd8d8c5007cc 279 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 3.9E-18 T 12-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 Vc3S01_0324 527e6f2e6fe02adaae17fd8d8c5007cc 279 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 175 187 3.9E-18 T 12-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 Vc3S01_0324 527e6f2e6fe02adaae17fd8d8c5007cc 279 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 3.9E-18 T 12-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 Vc3S01_0324 527e6f2e6fe02adaae17fd8d8c5007cc 279 PIRSF PIRSF000398 1 274 2.0E-72 T 12-10-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 Vc3S01_0401 a70ce838b000463a3fdf8b10f7fbdcfd 1292 Pfam PF13116 Protein of unknown function 506 792 3.7E-94 T 12-10-2018 IPR025263 Domain of unknown function DUF3971 Vc3S01_0401 a70ce838b000463a3fdf8b10f7fbdcfd 1292 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 7 1280 0.0 T 12-10-2018 IPR011836 Conserved hypothetical protein CHP02099 Vc3S01_0401 a70ce838b000463a3fdf8b10f7fbdcfd 1292 Pfam PF13502 AsmA-like C-terminal region 1030 1270 8.3E-57 T 12-10-2018 IPR032712 AsmA-like, C-terminal Vc3S01_0917 3246f445b6fd22311c6e3a8043948c9a 197 Pfam PF05036 Sporulation related domain 121 189 7.1E-11 T 12-10-2018 IPR007730 Sporulation-like domain GO:0042834 Vc3S01_0917 3246f445b6fd22311c6e3a8043948c9a 197 SUPERFAMILY SSF110997 120 193 2.22E-14 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Vc3S01_0917 3246f445b6fd22311c6e3a8043948c9a 197 Gene3D G3DSA:3.30.70.1070 114 191 5.7E-9 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Vc3S01_0053 4daa711597049cc9aa43bf5890a487ad 646 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 143 594 9.1E-219 T 12-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Vc3S01_0053 4daa711597049cc9aa43bf5890a487ad 646 Pfam PF13667 ThiC-associated domain 22 104 1.1E-34 T 12-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Vc3S01_0053 4daa711597049cc9aa43bf5890a487ad 646 Gene3D G3DSA:3.20.20.540 214 527 1.9E-153 T 12-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Vc3S01_0053 4daa711597049cc9aa43bf5890a487ad 646 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 143 596 99.638 T 12-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Vc3S01_0053 4daa711597049cc9aa43bf5890a487ad 646 Pfam PF01964 Radical SAM ThiC family 144 592 8.2E-199 T 12-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Vc3S01_A1892 1ca9b37f625ccb970b791f266457fff8 436 Pfam PF13520 Amino acid permease 9 414 1.1E-46 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Vc3S01_A1892 1ca9b37f625ccb970b791f266457fff8 436 Gene3D G3DSA:1.20.1740.10 1 435 5.8E-61 T 12-10-2018 Vc3S01_A1892 1ca9b37f625ccb970b791f266457fff8 436 Hamap MF_02073 Putrescine transporter PotE [potE]. 8 435 34.461 T 12-10-2018 IPR027566 Putrescine transporter PotE GO:0015496|GO:0015822|GO:0015847 Vc3S01_A1892 1ca9b37f625ccb970b791f266457fff8 436 TIGRFAM TIGR04299 antiport_PotE: putrescine-ornithine antiporter 4 431 3.4E-203 T 12-10-2018 IPR027566 Putrescine transporter PotE GO:0015496|GO:0015822|GO:0015847 Vc3S01_A1892 1ca9b37f625ccb970b791f266457fff8 436 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 1 430 3.2E-125 T 12-10-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 Vc3S01_A1892 1ca9b37f625ccb970b791f266457fff8 436 PIRSF PIRSF006060 1 432 3.7E-52 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Vc3S01_2877 8a41734494dfb4dc3394bee00699deae 311 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 146 158 - T 12-10-2018 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263 Vc3S01_2877 8a41734494dfb4dc3394bee00699deae 311 Gene3D G3DSA:3.90.110.10 147 311 1.0E-54 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 Vc3S01_2877 8a41734494dfb4dc3394bee00699deae 311 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 309 9.8E-50 T 12-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 Vc3S01_2877 8a41734494dfb4dc3394bee00699deae 311 PIRSF PIRSF000102 1 308 3.2E-62 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 Vc3S01_2877 8a41734494dfb4dc3394bee00699deae 311 SUPERFAMILY SSF56327 146 309 2.01E-43 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 Vc3S01_2877 8a41734494dfb4dc3394bee00699deae 311 SUPERFAMILY SSF51735 1 145 3.67E-39 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_2877 8a41734494dfb4dc3394bee00699deae 311 Hamap MF_01516 Malate dehydrogenase [mdh]. 1 311 57.552 T 12-10-2018 IPR023958 Malate dehydrogenase, type 1, bacterial GO:0006099|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 Vc3S01_2877 8a41734494dfb4dc3394bee00699deae 311 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 3.8E-47 T 12-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 Vc3S01_2877 8a41734494dfb4dc3394bee00699deae 311 TIGRFAM TIGR01772 MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 2 310 1.2E-129 T 12-10-2018 IPR010097 Malate dehydrogenase, type 1 GO:0006099|GO:0030060 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263|Reactome: R-HSA-71403 Vc3S01_2877 8a41734494dfb4dc3394bee00699deae 311 Gene3D G3DSA:3.40.50.720 1 146 9.3E-66 T 12-10-2018 Vc3S01_A1756 7bfb707343e840b6f71cb46c63d41c6e 159 Gene3D G3DSA:3.30.1060.10 1 157 1.8E-42 T 12-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Vc3S01_A1756 7bfb707343e840b6f71cb46c63d41c6e 159 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 2 145 1.7E-32 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Vc3S01_A1756 7bfb707343e840b6f71cb46c63d41c6e 159 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 1 151 27.157 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Vc3S01_A1756 7bfb707343e840b6f71cb46c63d41c6e 159 Pfam PF01625 Peptide methionine sulfoxide reductase 3 146 2.1E-44 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Vc3S01_A1756 7bfb707343e840b6f71cb46c63d41c6e 159 SUPERFAMILY SSF55068 1 148 2.22E-50 T 12-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Vc3S01_A0001 d170250455db5931ad0da794102acb6b 405 Gene3D G3DSA:1.10.1660.30 36 102 3.9E-6 T 12-10-2018 Vc3S01_A0001 d170250455db5931ad0da794102acb6b 405 SUPERFAMILY SSF52540 108 366 1.2E-32 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A0001 d170250455db5931ad0da794102acb6b 405 Pfam PF13614 AAA domain 110 295 2.0E-22 T 12-10-2018 IPR025669 AAA domain Vc3S01_A0001 d170250455db5931ad0da794102acb6b 405 Gene3D G3DSA:3.40.50.300 107 397 4.4E-56 T 12-10-2018 Vc3S01_0709 22ab727e82797827b9be2cfa05877693 263 Pfam PF00455 DeoR C terminal sensor domain 74 232 2.3E-50 T 12-10-2018 IPR014036 DeoR C-terminal sensor domain Vc3S01_0709 22ab727e82797827b9be2cfa05877693 263 Gene3D G3DSA:3.30.750.70 70 134 5.7E-8 T 12-10-2018 Vc3S01_0709 22ab727e82797827b9be2cfa05877693 263 SUPERFAMILY SSF100950 74 234 1.1E-28 T 12-10-2018 IPR037171 NagB/RpiA transferase-like Vc3S01_0709 22ab727e82797827b9be2cfa05877693 263 Gene3D G3DSA:1.10.10.10 1 67 1.9E-8 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_0709 22ab727e82797827b9be2cfa05877693 263 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 7.4E-12 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Vc3S01_0709 22ab727e82797827b9be2cfa05877693 263 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 7.4E-12 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Vc3S01_0709 22ab727e82797827b9be2cfa05877693 263 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 4.8E-23 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Vc3S01_0709 22ab727e82797827b9be2cfa05877693 263 SMART SM00420 6 58 1.2E-25 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Vc3S01_0709 22ab727e82797827b9be2cfa05877693 263 SUPERFAMILY SSF46785 5 77 3.28E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_0709 22ab727e82797827b9be2cfa05877693 263 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 12-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 Vc3S01_0709 22ab727e82797827b9be2cfa05877693 263 SMART SM01134 72 234 1.2E-67 T 12-10-2018 Vc3S01_0478 f0174099b41bb9bc42886bc2c79dbb5e 187 Pfam PF02622 Uncharacterized ACR, COG1678 12 174 4.9E-51 T 12-10-2018 IPR003774 Protein of unknown function UPF0301 Vc3S01_0478 f0174099b41bb9bc42886bc2c79dbb5e 187 Gene3D G3DSA:3.40.1740.10 1 187 3.0E-70 T 12-10-2018 Vc3S01_0478 f0174099b41bb9bc42886bc2c79dbb5e 187 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 1 187 39.395 T 12-10-2018 IPR003774 Protein of unknown function UPF0301 Vc3S01_0478 f0174099b41bb9bc42886bc2c79dbb5e 187 SUPERFAMILY SSF143456 1 187 1.83E-67 T 12-10-2018 Vc3S01_1505 96b3fb58cd63bc9aef5b38d6bb1c37d8 473 Pfam PF13365 Trypsin-like peptidase domain 171 330 4.5E-11 T 12-10-2018 Vc3S01_1505 96b3fb58cd63bc9aef5b38d6bb1c37d8 473 Gene3D G3DSA:2.40.10.10 294 354 2.3E-7 T 12-10-2018 Vc3S01_1505 96b3fb58cd63bc9aef5b38d6bb1c37d8 473 Gene3D G3DSA:2.60.120.380 374 471 2.7E-22 T 12-10-2018 Vc3S01_1505 96b3fb58cd63bc9aef5b38d6bb1c37d8 473 Gene3D G3DSA:2.40.10.10 161 293 2.3E-6 T 12-10-2018 Vc3S01_1505 96b3fb58cd63bc9aef5b38d6bb1c37d8 473 SUPERFAMILY SSF50494 151 335 5.88E-25 T 12-10-2018 IPR009003 Peptidase S1, PA clan Vc3S01_A1849 d5a5276180b6a441a018b83763250067 374 Gene3D G3DSA:2.40.160.50 119 372 2.0E-9 T 12-10-2018 Vc3S01_A1849 d5a5276180b6a441a018b83763250067 374 Pfam PF01103 Surface antigen 91 295 2.5E-9 T 12-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 Vc3S01_1267 099032f1c849fdfe9cb0bea150940cdf 472 PRINTS PR01042 Aspartyl-tRNA synthetase signature 214 226 2.4E-14 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Vc3S01_1267 099032f1c849fdfe9cb0bea150940cdf 472 PRINTS PR01042 Aspartyl-tRNA synthetase signature 387 403 2.4E-14 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Vc3S01_1267 099032f1c849fdfe9cb0bea150940cdf 472 PRINTS PR01042 Aspartyl-tRNA synthetase signature 427 441 2.4E-14 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Vc3S01_1267 099032f1c849fdfe9cb0bea150940cdf 472 PRINTS PR01042 Aspartyl-tRNA synthetase signature 230 243 2.4E-14 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Vc3S01_1267 099032f1c849fdfe9cb0bea150940cdf 472 Gene3D G3DSA:2.40.50.140 3 111 3.8E-20 T 12-10-2018 Vc3S01_1267 099032f1c849fdfe9cb0bea150940cdf 472 Pfam PF00152 tRNA synthetases class II (D, K and N) 125 466 3.4E-81 T 12-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Vc3S01_1267 099032f1c849fdfe9cb0bea150940cdf 472 SUPERFAMILY SSF55681 104 470 1.13E-95 T 12-10-2018 Vc3S01_1267 099032f1c849fdfe9cb0bea150940cdf 472 Gene3D G3DSA:3.30.930.10 115 471 7.6E-109 T 12-10-2018 Vc3S01_1267 099032f1c849fdfe9cb0bea150940cdf 472 Pfam PF01336 OB-fold nucleic acid binding domain 26 105 1.2E-11 T 12-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 Vc3S01_1267 099032f1c849fdfe9cb0bea150940cdf 472 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 11 472 2.2E-206 T 12-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 Vc3S01_1267 099032f1c849fdfe9cb0bea150940cdf 472 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 12 472 45.868 T 12-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 Vc3S01_1267 099032f1c849fdfe9cb0bea150940cdf 472 SUPERFAMILY SSF50249 22 107 3.86E-17 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Vc3S01_0933 ae4a21f6e6ef71c3d1fabea991302c8b 82 Pfam PF03692 Putative zinc- or iron-chelating domain 3 59 1.0E-5 T 12-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein Vc3S01_3054 1a28ca6fd5523bfb9f1bd848d71ca061 310 Gene3D G3DSA:1.10.40.60 73 189 2.6E-92 T 12-10-2018 IPR038072 GspK, central domain superfamily Vc3S01_3054 1a28ca6fd5523bfb9f1bd848d71ca061 310 PIRSF PIRSF002786 1 302 1.0E-53 T 12-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 Vc3S01_3054 1a28ca6fd5523bfb9f1bd848d71ca061 310 SUPERFAMILY SSF54523 10 299 9.1E-36 T 12-10-2018 Vc3S01_3054 1a28ca6fd5523bfb9f1bd848d71ca061 310 Pfam PF03934 Type II secretion system (T2SS), protein K 4 291 5.8E-88 T 12-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 Vc3S01_3054 1a28ca6fd5523bfb9f1bd848d71ca061 310 Gene3D G3DSA:1.10.40.60 190 259 2.6E-92 T 12-10-2018 IPR038072 GspK, central domain superfamily Vc3S01_3054 1a28ca6fd5523bfb9f1bd848d71ca061 310 Gene3D G3DSA:3.30.1300.30 16 283 2.6E-92 T 12-10-2018 Vc3S01_3054 1a28ca6fd5523bfb9f1bd848d71ca061 310 SUPERFAMILY SSF158544 75 187 2.62E-33 T 12-10-2018 IPR038072 GspK, central domain superfamily Vc3S01_3054 1a28ca6fd5523bfb9f1bd848d71ca061 310 SUPERFAMILY SSF158544 189 256 1.8E-19 T 12-10-2018 IPR038072 GspK, central domain superfamily Vc3S01_2731 46dc76aab900ada835fdda9a5a4861b9 458 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 35 434 2.1E-132 T 12-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 Vc3S01_2731 46dc76aab900ada835fdda9a5a4861b9 458 Pfam PF05525 Branched-chain amino acid transport protein 29 447 9.6E-149 T 12-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 Vc3S01_1593 948e66aedf6fd7776bfdc2bf4ddb9011 520 Gene3D G3DSA:3.40.720.10 27 393 1.3E-99 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Vc3S01_1593 948e66aedf6fd7776bfdc2bf4ddb9011 520 Gene3D G3DSA:3.30.1120.10 394 426 1.3E-99 T 12-10-2018 Vc3S01_1593 948e66aedf6fd7776bfdc2bf4ddb9011 520 Pfam PF00884 Sulfatase 27 353 3.8E-64 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 Vc3S01_1593 948e66aedf6fd7776bfdc2bf4ddb9011 520 SUPERFAMILY SSF53649 23 447 2.33E-117 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Vc3S01_0855 eb6362f40d3b30a63c9c3d83fce2df34 266 Pfam PF02108 Flagellar assembly protein FliH 125 251 3.5E-36 T 12-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE Vc3S01_0855 eb6362f40d3b30a63c9c3d83fce2df34 266 PRINTS PR01003 Flagellar assembly protein FliH signature 89 111 3.1E-5 T 12-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 Vc3S01_0855 eb6362f40d3b30a63c9c3d83fce2df34 266 PRINTS PR01003 Flagellar assembly protein FliH signature 217 233 3.1E-5 T 12-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 Vc3S01_0855 eb6362f40d3b30a63c9c3d83fce2df34 266 PRINTS PR01003 Flagellar assembly protein FliH signature 112 130 3.1E-5 T 12-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 Vc3S01_A1257 ce576dd1d4c342e58eca39eceffe8721 104 SUPERFAMILY SSF103481 6 102 2.09E-18 T 12-10-2018 Vc3S01_A1257 ce576dd1d4c342e58eca39eceffe8721 104 Pfam PF00893 Small Multidrug Resistance protein 1 93 1.4E-28 T 12-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 Vc3S01_A1257 ce576dd1d4c342e58eca39eceffe8721 104 Gene3D G3DSA:1.10.3730.20 1 104 4.0E-31 T 12-10-2018 Vc3S01_A0630 4c26f5624ac0e5a783419d5aa343d2d1 124 Pfam PF08765 Mor transcription activator family 34 123 6.5E-16 T 12-10-2018 IPR014875 Mor transcription activator Vc3S01_A0630 4c26f5624ac0e5a783419d5aa343d2d1 124 Gene3D G3DSA:1.10.10.60 82 124 2.1E-6 T 12-10-2018 Vc3S01_A0630 4c26f5624ac0e5a783419d5aa343d2d1 124 SUPERFAMILY SSF46689 34 122 1.29E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_2957 c3a7a49c649a76328e1727bd5f46d91d 115 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 2 91 3.6E-7 T 12-10-2018 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10 Vc3S01_2957 c3a7a49c649a76328e1727bd5f46d91d 115 Gene3D G3DSA:3.30.429.10 1 115 1.7E-31 T 12-10-2018 IPR014347 Tautomerase/MIF superfamily Vc3S01_2957 c3a7a49c649a76328e1727bd5f46d91d 115 SUPERFAMILY SSF55331 2 115 6.72E-33 T 12-10-2018 IPR014347 Tautomerase/MIF superfamily Vc3S01_2544 c19bb1b50c3fe50f1806337d75799571 258 PIRSF PIRSF029037 1 258 2.6E-115 T 12-10-2018 IPR016908 Uncharacterised conserved protein UCP029037 Vc3S01_2544 c19bb1b50c3fe50f1806337d75799571 258 Pfam PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) 1 256 3.9E-114 T 12-10-2018 IPR016908 Uncharacterised conserved protein UCP029037 Vc3S01_2772 11072066753d532ac338f6d5456ad7db 305 Gene3D G3DSA:3.30.230.20 1 128 6.1E-52 T 12-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 Vc3S01_2772 11072066753d532ac338f6d5456ad7db 305 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 276 1.1E-108 T 12-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 Vc3S01_2772 11072066753d532ac338f6d5456ad7db 305 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 298 4.2E-142 T 12-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 Vc3S01_2772 11072066753d532ac338f6d5456ad7db 305 Gene3D G3DSA:3.30.1700.10 129 305 1.5E-70 T 12-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 Vc3S01_2772 11072066753d532ac338f6d5456ad7db 305 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 280 46.593 T 12-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 Vc3S01_2772 11072066753d532ac338f6d5456ad7db 305 SUPERFAMILY SSF54211 134 278 1.59E-52 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Vc3S01_2772 11072066753d532ac338f6d5456ad7db 305 SUPERFAMILY SSF54211 3 126 9.86E-43 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Vc3S01_0099 154cf5fae6c2bf9a15f90a04531b961f 828 Pfam PF08495 FIST N domain 30 212 1.7E-20 T 12-10-2018 IPR013702 FIST domain, N-terminal Vc3S01_0099 154cf5fae6c2bf9a15f90a04531b961f 828 SUPERFAMILY SSF141868 598 825 1.05E-56 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_0099 154cf5fae6c2bf9a15f90a04531b961f 828 SMART SM00897 28 214 3.8E-29 T 12-10-2018 IPR013702 FIST domain, N-terminal Vc3S01_0099 154cf5fae6c2bf9a15f90a04531b961f 828 Gene3D G3DSA:3.20.20.450 594 827 9.3E-59 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_0099 154cf5fae6c2bf9a15f90a04531b961f 828 SUPERFAMILY SSF55073 419 550 2.59E-8 T 12-10-2018 IPR029787 Nucleotide cyclase Vc3S01_0099 154cf5fae6c2bf9a15f90a04531b961f 828 Pfam PF10442 FIST C domain 215 338 3.1E-11 T 12-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 Vc3S01_0099 154cf5fae6c2bf9a15f90a04531b961f 828 Pfam PF00563 EAL domain 598 824 4.4E-56 T 12-10-2018 IPR001633 EAL domain Vc3S01_0099 154cf5fae6c2bf9a15f90a04531b961f 828 SMART SM01204 215 341 1.8E-16 T 12-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 Vc3S01_0099 154cf5fae6c2bf9a15f90a04531b961f 828 SMART SM00267 402 577 0.0052 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_0099 154cf5fae6c2bf9a15f90a04531b961f 828 Gene3D G3DSA:3.30.70.270 399 568 4.8E-15 T 12-10-2018 Vc3S01_0099 154cf5fae6c2bf9a15f90a04531b961f 828 Pfam PF00990 Diguanylate cyclase, GGDEF domain 415 477 8.7E-7 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_0099 154cf5fae6c2bf9a15f90a04531b961f 828 SMART SM00052 590 828 4.1E-32 T 12-10-2018 IPR001633 EAL domain Vc3S01_A1147 62f8a79d869222d5e5f79c2069d77e9b 202 Gene3D G3DSA:3.40.50.12740 2 202 6.5E-53 T 12-10-2018 Vc3S01_A1147 62f8a79d869222d5e5f79c2069d77e9b 202 ProSitePatterns PS00622 LuxR-type HTH domain signature. 157 184 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_A1147 62f8a79d869222d5e5f79c2069d77e9b 202 SMART SM00448 2 112 1.1E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A1147 62f8a79d869222d5e5f79c2069d77e9b 202 Pfam PF00072 Response regulator receiver domain 4 113 3.5E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A1147 62f8a79d869222d5e5f79c2069d77e9b 202 SMART SM00421 140 197 8.4E-22 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_A1147 62f8a79d869222d5e5f79c2069d77e9b 202 SUPERFAMILY SSF46894 124 198 1.02E-19 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Vc3S01_A1147 62f8a79d869222d5e5f79c2069d77e9b 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 173 9.7E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_A1147 62f8a79d869222d5e5f79c2069d77e9b 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 143 157 9.7E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_A1147 62f8a79d869222d5e5f79c2069d77e9b 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 185 9.7E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_A1147 62f8a79d869222d5e5f79c2069d77e9b 202 Pfam PF00196 Bacterial regulatory proteins, luxR family 142 196 2.1E-19 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_A1147 62f8a79d869222d5e5f79c2069d77e9b 202 SUPERFAMILY SSF52172 1 124 8.54E-25 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_1661 d65381b3c26cb44649c47f1c40b6b62c 248 ProSitePatterns PS00042 Crp-type HTH domain signature. 195 218 - T 12-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 Vc3S01_1661 d65381b3c26cb44649c47f1c40b6b62c 248 SUPERFAMILY SSF51206 23 162 1.44E-31 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like Vc3S01_1661 d65381b3c26cb44649c47f1c40b6b62c 248 Gene3D G3DSA:1.10.10.10 165 247 3.3E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_1661 d65381b3c26cb44649c47f1c40b6b62c 248 Pfam PF00027 Cyclic nucleotide-binding domain 51 132 6.9E-15 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain Vc3S01_1661 d65381b3c26cb44649c47f1c40b6b62c 248 SMART SM00100 30 151 2.0E-20 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain Vc3S01_1661 d65381b3c26cb44649c47f1c40b6b62c 248 Gene3D G3DSA:2.60.120.10 43 164 2.3E-48 T 12-10-2018 IPR014710 RmlC-like jelly roll fold Vc3S01_1661 d65381b3c26cb44649c47f1c40b6b62c 248 Pfam PF13545 Crp-like helix-turn-helix domain 168 241 2.1E-17 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Vc3S01_1661 d65381b3c26cb44649c47f1c40b6b62c 248 SUPERFAMILY SSF46785 165 244 2.73E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_1661 d65381b3c26cb44649c47f1c40b6b62c 248 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 193 209 2.5E-11 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Vc3S01_1661 d65381b3c26cb44649c47f1c40b6b62c 248 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 209 224 2.5E-11 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Vc3S01_1661 d65381b3c26cb44649c47f1c40b6b62c 248 SMART SM00419 187 235 4.3E-15 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Vc3S01_2965 cd6b43e0343d6e479881f350f356cd47 307 Pfam PF00535 Glycosyl transferase family 2 7 168 1.4E-33 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Vc3S01_2965 cd6b43e0343d6e479881f350f356cd47 307 Gene3D G3DSA:3.90.550.10 1 253 1.7E-60 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Vc3S01_2965 cd6b43e0343d6e479881f350f356cd47 307 SUPERFAMILY SSF53448 4 229 4.75E-55 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Vc3S01_0421 41d7532a6fb6571d9fc8376c7c4eb38b 321 Pfam PF01699 Sodium/calcium exchanger protein 175 316 1.1E-28 T 12-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 Vc3S01_0421 41d7532a6fb6571d9fc8376c7c4eb38b 321 Pfam PF01699 Sodium/calcium exchanger protein 5 143 3.2E-27 T 12-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 Vc3S01_0421 41d7532a6fb6571d9fc8376c7c4eb38b 321 Gene3D G3DSA:1.20.1420.30 35 308 5.4E-86 T 12-10-2018 Vc3S01_0421 41d7532a6fb6571d9fc8376c7c4eb38b 321 Gene3D G3DSA:1.20.58.1130 8 206 5.4E-86 T 12-10-2018 Vc3S01_0421 41d7532a6fb6571d9fc8376c7c4eb38b 321 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 3 311 1.5E-82 T 12-10-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 Vc3S01_2411 d0029e6daab982a5752e8776b50f81da 149 Gene3D G3DSA:1.10.10.10 1 84 9.8E-35 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_2411 d0029e6daab982a5752e8776b50f81da 149 Gene3D G3DSA:3.30.1490.190 85 141 1.2E-23 T 12-10-2018 Vc3S01_2411 d0029e6daab982a5752e8776b50f81da 149 Pfam PF01475 Ferric uptake regulator family 11 130 1.6E-46 T 12-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 Vc3S01_2411 d0029e6daab982a5752e8776b50f81da 149 SUPERFAMILY SSF46785 5 135 6.68E-44 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_2684 9490c4bff138b6a0225a0b3d18b477d2 242 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 1 240 37.3 T 12-10-2018 IPR017689 Outer membrane protein assembly factor BamD Vc3S01_2684 9490c4bff138b6a0225a0b3d18b477d2 242 SUPERFAMILY SSF48452 30 119 6.64E-8 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_2684 9490c4bff138b6a0225a0b3d18b477d2 242 Gene3D G3DSA:1.25.40.10 28 242 2.3E-53 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_2684 9490c4bff138b6a0225a0b3d18b477d2 242 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 6 239 4.6E-79 T 12-10-2018 IPR017689 Outer membrane protein assembly factor BamD Vc3S01_2684 9490c4bff138b6a0225a0b3d18b477d2 242 Pfam PF13525 Outer membrane lipoprotein 26 232 3.0E-79 T 12-10-2018 IPR039565 Outer membrane lipoprotein BamD-like Vc3S01_A0225 ec1cc32b14736b8f5fb8c4f0cbcb7ce4 291 Pfam PF00950 ABC 3 transport family 23 285 4.4E-55 T 12-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 Vc3S01_A0225 ec1cc32b14736b8f5fb8c4f0cbcb7ce4 291 SUPERFAMILY SSF81345 15 281 7.85E-35 T 12-10-2018 IPR037294 ABC transporter, BtuC-like Vc3S01_A0225 ec1cc32b14736b8f5fb8c4f0cbcb7ce4 291 Gene3D G3DSA:1.10.3470.10 77 288 1.2E-9 T 12-10-2018 IPR037294 ABC transporter, BtuC-like Vc3S01_A1602 707d2b579e78e446948710bee2cfb6a0 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 63 6.4E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A1602 707d2b579e78e446948710bee2cfb6a0 307 Gene3D G3DSA:3.40.190.10 169 271 1.5E-46 T 12-10-2018 Vc3S01_A1602 707d2b579e78e446948710bee2cfb6a0 307 Gene3D G3DSA:3.40.190.10 88 295 1.5E-46 T 12-10-2018 Vc3S01_A1602 707d2b579e78e446948710bee2cfb6a0 307 SUPERFAMILY SSF46785 3 81 4.22E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A1602 707d2b579e78e446948710bee2cfb6a0 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 5.7E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A1602 707d2b579e78e446948710bee2cfb6a0 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 5.7E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A1602 707d2b579e78e446948710bee2cfb6a0 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 5.7E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A1602 707d2b579e78e446948710bee2cfb6a0 307 Gene3D G3DSA:1.10.10.10 1 85 7.8E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A1602 707d2b579e78e446948710bee2cfb6a0 307 Pfam PF03466 LysR substrate binding domain 96 296 6.8E-20 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_A1602 707d2b579e78e446948710bee2cfb6a0 307 SUPERFAMILY SSF53850 88 296 7.6E-36 T 12-10-2018 Vc3S01_A1518 abe5b20d2b4b3949db4b631076f53556 473 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 9 343 1.5E-148 T 12-10-2018 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.197 Vc3S01_A1518 abe5b20d2b4b3949db4b631076f53556 473 SUPERFAMILY SSF52794 379 465 7.32E-20 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 Vc3S01_A1518 abe5b20d2b4b3949db4b631076f53556 473 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 379 460 2.4E-10 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 Vc3S01_A1518 abe5b20d2b4b3949db4b631076f53556 473 Pfam PF02378 Phosphotransferase system, EIIC 19 276 1.4E-19 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 Vc3S01_A1518 abe5b20d2b4b3949db4b631076f53556 473 Gene3D G3DSA:3.40.50.2300 365 467 1.5E-29 T 12-10-2018 Vc3S01_3015 c883c00678ad64fc5aa48b67c8e59306 213 Gene3D G3DSA:3.40.50.2020 1 213 8.8E-80 T 12-10-2018 Vc3S01_3015 c883c00678ad64fc5aa48b67c8e59306 213 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 213 36.261 T 12-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Vc3S01_3015 c883c00678ad64fc5aa48b67c8e59306 213 Pfam PF00156 Phosphoribosyl transferase domain 43 161 4.4E-12 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Vc3S01_3015 c883c00678ad64fc5aa48b67c8e59306 213 SUPERFAMILY SSF53271 2 212 2.13E-50 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like Vc3S01_3015 c883c00678ad64fc5aa48b67c8e59306 213 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 187 8.4E-70 T 12-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Vc3S01_0749 7c15e9747f0895b416bcd5fab31f7274 261 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 5 254 4.8E-97 T 12-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 Vc3S01_0749 7c15e9747f0895b416bcd5fab31f7274 261 SMART SM00900 148 246 8.0E-32 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Vc3S01_0749 7c15e9747f0895b416bcd5fab31f7274 261 Pfam PF04205 FMN-binding domain 148 243 8.5E-14 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Vc3S01_0749 7c15e9747f0895b416bcd5fab31f7274 261 PIRSF PIRSF009437 1 261 2.2E-102 T 12-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 Vc3S01_0749 7c15e9747f0895b416bcd5fab31f7274 261 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 6 258 35.3 T 12-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 Vc3S01_A0524 5cafa58d504c7c7300c9672909bc4d69 343 Gene3D G3DSA:3.40.50.2000 2 169 2.1E-9 T 12-10-2018 Vc3S01_A0524 5cafa58d504c7c7300c9672909bc4d69 343 SUPERFAMILY SSF53756 3 313 2.69E-37 T 12-10-2018 Vc3S01_A0524 5cafa58d504c7c7300c9672909bc4d69 343 Gene3D G3DSA:3.40.50.2000 170 318 6.6E-18 T 12-10-2018 Vc3S01_A0524 5cafa58d504c7c7300c9672909bc4d69 343 Pfam PF13579 Glycosyl transferase 4-like domain 63 159 3.3E-13 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Vc3S01_A0524 5cafa58d504c7c7300c9672909bc4d69 343 Pfam PF13692 Glycosyl transferases group 1 182 311 8.8E-16 T 12-10-2018 Vc3S01_1997 474fd6a351cdee8fb12e7e3450f89fc4 237 Gene3D G3DSA:2.60.120.10 10 77 4.3E-6 T 12-10-2018 IPR014710 RmlC-like jelly roll fold Vc3S01_1997 474fd6a351cdee8fb12e7e3450f89fc4 237 Pfam PF12833 Helix-turn-helix domain 164 231 1.8E-13 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_1997 474fd6a351cdee8fb12e7e3450f89fc4 237 Gene3D G3DSA:1.10.10.60 140 235 6.6E-14 T 12-10-2018 Vc3S01_1997 474fd6a351cdee8fb12e7e3450f89fc4 237 SMART SM00342 158 234 1.1E-4 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_1997 474fd6a351cdee8fb12e7e3450f89fc4 237 SUPERFAMILY SSF51182 20 69 6.67E-6 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily Vc3S01_0490 06a04d6ac44356284d20b8ec59a21150 288 SUPERFAMILY SSF82689 187 284 7.32E-35 T 12-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 Vc3S01_0490 06a04d6ac44356284d20b8ec59a21150 288 SUPERFAMILY SSF50182 120 185 4.58E-18 T 12-10-2018 IPR010920 LSM domain superfamily Vc3S01_0490 06a04d6ac44356284d20b8ec59a21150 288 Gene3D G3DSA:2.30.30.60 135 184 5.2E-23 T 12-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily Vc3S01_0490 06a04d6ac44356284d20b8ec59a21150 288 SUPERFAMILY SSF82861 33 118 1.28E-17 T 12-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 Vc3S01_0490 06a04d6ac44356284d20b8ec59a21150 288 Gene3D G3DSA:3.30.70.100 185 279 1.7E-28 T 12-10-2018 Vc3S01_0490 06a04d6ac44356284d20b8ec59a21150 288 Pfam PF00924 Mechanosensitive ion channel 77 274 2.2E-58 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 Vc3S01_0490 06a04d6ac44356284d20b8ec59a21150 288 Pfam PF05552 Conserved TM helix 21 69 1.9E-13 T 12-10-2018 IPR008910 Conserved TM helix Vc3S01_0490 06a04d6ac44356284d20b8ec59a21150 288 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 149 183 - T 12-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 Vc3S01_2023 14a6c7aca282d58b8e74fb32a19ef43e 295 SUPERFAMILY SSF161098 89 276 4.58E-22 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_2023 14a6c7aca282d58b8e74fb32a19ef43e 295 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 14 65 2.9E-15 T 12-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Vc3S01_2023 14a6c7aca282d58b8e74fb32a19ef43e 295 Gene3D G3DSA:1.10.3720.10 85 291 4.7E-18 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_2023 14a6c7aca282d58b8e74fb32a19ef43e 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 293 1.6E-20 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Vc3S01_p20065 c31fb124a80a5d0561d6f734876eeb19 336 SUPERFAMILY SSF46785 148 248 1.85E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_p20065 c31fb124a80a5d0561d6f734876eeb19 336 Gene3D G3DSA:1.10.10.10 1 158 9.3E-48 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_p20065 c31fb124a80a5d0561d6f734876eeb19 336 Pfam PF01051 Initiator Replication protein 9 245 1.0E-42 T 12-10-2018 IPR000525 Initiator Rep protein GO:0003887|GO:0005727|GO:0006270 Vc3S01_p20065 c31fb124a80a5d0561d6f734876eeb19 336 SUPERFAMILY SSF46785 10 143 8.16E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_p20065 c31fb124a80a5d0561d6f734876eeb19 336 Gene3D G3DSA:1.10.10.10 160 252 1.3E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A1674 735cb578a8946ae825d5c51f94ad6bfc 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 3.2E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A1674 735cb578a8946ae825d5c51f94ad6bfc 293 Gene3D G3DSA:3.40.190.10 103 286 1.1E-47 T 12-10-2018 Vc3S01_A1674 735cb578a8946ae825d5c51f94ad6bfc 293 Gene3D G3DSA:1.10.10.10 1 89 1.2E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A1674 735cb578a8946ae825d5c51f94ad6bfc 293 Pfam PF03466 LysR substrate binding domain 87 288 6.1E-34 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_A1674 735cb578a8946ae825d5c51f94ad6bfc 293 SUPERFAMILY SSF46785 2 86 9.07E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A1674 735cb578a8946ae825d5c51f94ad6bfc 293 SUPERFAMILY SSF53850 86 291 1.72E-37 T 12-10-2018 Vc3S01_A1674 735cb578a8946ae825d5c51f94ad6bfc 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 9.9E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A1674 735cb578a8946ae825d5c51f94ad6bfc 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 9.9E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A1674 735cb578a8946ae825d5c51f94ad6bfc 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 9.9E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A1674 735cb578a8946ae825d5c51f94ad6bfc 293 Gene3D G3DSA:3.40.190.10 162 261 1.1E-47 T 12-10-2018 Vc3S01_2758 9bf01f10459b4e26144f662a98f8e10a 142 PIRSF PIRSF026426 1 142 1.9E-47 T 12-10-2018 IPR010865 Protein of unknown function DUF1499 Vc3S01_2758 9bf01f10459b4e26144f662a98f8e10a 142 Pfam PF07386 Protein of unknown function (DUF1499) 30 133 2.0E-23 T 12-10-2018 IPR010865 Protein of unknown function DUF1499 Vc3S01_1781 daeccddfbf4eb46ad2a86b1fd1015d6f 263 SMART SM00257 208 256 4.8E-8 T 12-10-2018 IPR018392 LysM domain Vc3S01_1781 daeccddfbf4eb46ad2a86b1fd1015d6f 263 Pfam PF01476 LysM domain 209 256 1.6E-7 T 12-10-2018 IPR018392 LysM domain Vc3S01_1781 daeccddfbf4eb46ad2a86b1fd1015d6f 263 Gene3D G3DSA:3.10.350.10 192 260 6.3E-11 T 12-10-2018 IPR036779 LysM domain superfamily Vc3S01_1781 daeccddfbf4eb46ad2a86b1fd1015d6f 263 Gene3D G3DSA:2.40.160.20 15 182 7.5E-17 T 12-10-2018 Vc3S01_1781 daeccddfbf4eb46ad2a86b1fd1015d6f 263 SUPERFAMILY SSF56925 20 166 2.3E-18 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel Vc3S01_1781 daeccddfbf4eb46ad2a86b1fd1015d6f 263 Pfam PF13505 Outer membrane protein beta-barrel domain 12 166 9.9E-12 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel Vc3S01_1781 daeccddfbf4eb46ad2a86b1fd1015d6f 263 SUPERFAMILY SSF54106 207 256 8.76E-8 T 12-10-2018 Vc3S01_0923 2ac20cf3aadce379a5f1d7c3595fff63 115 PIRSF PIRSF016789 1 110 3.9E-39 T 12-10-2018 IPR007401 Protein of unknown function DUF454 Vc3S01_0923 2ac20cf3aadce379a5f1d7c3595fff63 115 Pfam PF04304 Protein of unknown function (DUF454) 1 103 3.8E-35 T 12-10-2018 IPR007401 Protein of unknown function DUF454 Vc3S01_2599 889f2f16248f62dab19d04cae3610319 118 Gene3D G3DSA:3.10.20.280 2 92 8.2E-33 T 12-10-2018 IPR037021 RnfH superfamily Vc3S01_2599 889f2f16248f62dab19d04cae3610319 118 SUPERFAMILY SSF54285 6 82 9.16E-26 T 12-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp Vc3S01_2599 889f2f16248f62dab19d04cae3610319 118 Hamap MF_00460 Protein RnfH [rnfH]. 8 98 24.592 T 12-10-2018 IPR005346 RnfH protein Vc3S01_2599 889f2f16248f62dab19d04cae3610319 118 Pfam PF03658 RnfH family Ubiquitin 8 90 2.0E-33 T 12-10-2018 IPR005346 RnfH protein Vc3S01_A0598 e286bad95aa42fb8f56115d3ca775d21 428 SUPERFAMILY SSF158472 159 208 4.45E-5 T 12-10-2018 Vc3S01_A0598 e286bad95aa42fb8f56115d3ca775d21 428 Gene3D G3DSA:3.30.565.10 280 428 1.9E-33 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_A0598 e286bad95aa42fb8f56115d3ca775d21 428 SUPERFAMILY SSF47384 194 276 7.06E-16 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Vc3S01_A0598 e286bad95aa42fb8f56115d3ca775d21 428 SMART SM00388 211 276 4.3E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_A0598 e286bad95aa42fb8f56115d3ca775d21 428 Gene3D G3DSA:1.10.287.130 162 277 7.8E-24 T 12-10-2018 Vc3S01_A0598 e286bad95aa42fb8f56115d3ca775d21 428 Pfam PF00672 HAMP domain 160 205 4.7E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Vc3S01_A0598 e286bad95aa42fb8f56115d3ca775d21 428 SUPERFAMILY SSF55874 266 428 1.57E-36 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_A0598 e286bad95aa42fb8f56115d3ca775d21 428 SMART SM00387 320 428 1.5E-30 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_A0598 e286bad95aa42fb8f56115d3ca775d21 428 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 408 2.8E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_A0598 e286bad95aa42fb8f56115d3ca775d21 428 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 427 2.8E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_A0598 e286bad95aa42fb8f56115d3ca775d21 428 PRINTS PR00344 Bacterial sensor protein C-terminal signature 355 369 2.8E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_A0598 e286bad95aa42fb8f56115d3ca775d21 428 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 383 2.8E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_A0598 e286bad95aa42fb8f56115d3ca775d21 428 Pfam PF00512 His Kinase A (phospho-acceptor) domain 214 275 4.1E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_A0598 e286bad95aa42fb8f56115d3ca775d21 428 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 321 427 4.5E-21 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_A0598 e286bad95aa42fb8f56115d3ca775d21 428 SMART SM00304 158 210 1.1E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Vc3S01_2375 c2e28f909ef4180ebd380bdfe6206ccc 185 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 9 155 7.8E-37 T 12-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 Vc3S01_2375 c2e28f909ef4180ebd380bdfe6206ccc 185 Pfam PF03843 Outer membrane lipoprotein Slp family 17 164 3.9E-46 T 12-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 Vc3S01_2375 c2e28f909ef4180ebd380bdfe6206ccc 185 PIRSF PIRSF004982 2 185 8.3E-63 T 12-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 Vc3S01_A0404 5ea6e1b62a370d1c07abe798cffa4e30 343 Pfam PF00107 Zinc-binding dehydrogenase 176 303 6.3E-28 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Vc3S01_A0404 5ea6e1b62a370d1c07abe798cffa4e30 343 Gene3D G3DSA:3.90.180.10 22 330 3.2E-119 T 12-10-2018 Vc3S01_A0404 5ea6e1b62a370d1c07abe798cffa4e30 343 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 3 342 60.912 T 12-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 Vc3S01_A0404 5ea6e1b62a370d1c07abe798cffa4e30 343 SUPERFAMILY SSF50129 3 175 2.89E-53 T 12-10-2018 IPR011032 GroES-like superfamily Vc3S01_A0404 5ea6e1b62a370d1c07abe798cffa4e30 343 SUPERFAMILY SSF51735 143 307 7.62E-37 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_A0404 5ea6e1b62a370d1c07abe798cffa4e30 343 SMART SM00829 14 340 5.8E-5 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Vc3S01_A0404 5ea6e1b62a370d1c07abe798cffa4e30 343 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 136 2.6E-32 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Vc3S01_A0404 5ea6e1b62a370d1c07abe798cffa4e30 343 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 5 342 5.6E-181 T 12-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 Vc3S01_A0404 5ea6e1b62a370d1c07abe798cffa4e30 343 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 64 78 - T 12-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 Vc3S01_A0404 5ea6e1b62a370d1c07abe798cffa4e30 343 Gene3D G3DSA:3.40.50.720 155 288 3.2E-119 T 12-10-2018 Vc3S01_2399 7a2e2f463284097043f19b327954acab 588 Gene3D G3DSA:3.90.700.10 246 350 9.8E-170 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Vc3S01_2399 7a2e2f463284097043f19b327954acab 588 Gene3D G3DSA:3.50.50.60 9 416 9.8E-170 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_2399 7a2e2f463284097043f19b327954acab 588 Pfam PF02910 Fumarate reductase flavoprotein C-term 460 588 2.4E-36 T 12-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Vc3S01_2399 7a2e2f463284097043f19b327954acab 588 Gene3D G3DSA:1.20.58.100 431 547 1.5E-37 T 12-10-2018 Vc3S01_2399 7a2e2f463284097043f19b327954acab 588 PIRSF PIRSF000171 1 580 8.6E-49 T 12-10-2018 Vc3S01_2399 7a2e2f463284097043f19b327954acab 588 SUPERFAMILY SSF46977 452 588 5.1E-46 T 12-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Vc3S01_2399 7a2e2f463284097043f19b327954acab 588 SUPERFAMILY SSF51905 5 443 7.07E-72 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_2399 7a2e2f463284097043f19b327954acab 588 SUPERFAMILY SSF56425 236 356 2.69E-42 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Vc3S01_2399 7a2e2f463284097043f19b327954acab 588 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 12-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Vc3S01_2399 7a2e2f463284097043f19b327954acab 588 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 588 3.9E-240 T 12-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Vc3S01_2399 7a2e2f463284097043f19b327954acab 588 Pfam PF00890 FAD binding domain 9 405 4.0E-118 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Vc3S01_2399 7a2e2f463284097043f19b327954acab 588 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 6 588 3.9E-274 T 12-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 Vc3S01_2399 7a2e2f463284097043f19b327954acab 588 Gene3D G3DSA:4.10.80.40 548 588 1.2E-23 T 12-10-2018 Vc3S01_2246 ad7370329c8da5fdb67626a6e1466ae0 246 Gene3D G3DSA:1.10.3720.10 3 243 3.6E-50 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_2246 ad7370329c8da5fdb67626a6e1466ae0 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 73 7.6E-16 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Vc3S01_2246 ad7370329c8da5fdb67626a6e1466ae0 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 241 1.6E-21 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Vc3S01_2246 ad7370329c8da5fdb67626a6e1466ae0 246 SUPERFAMILY SSF161098 11 233 3.66E-40 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_2507 74b58d386c15fdbc03738d15a0979671 290 SUPERFAMILY SSF54211 6 158 6.98E-44 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Vc3S01_2507 74b58d386c15fdbc03738d15a0979671 290 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 5 279 6.1E-95 T 12-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 Vc3S01_2507 74b58d386c15fdbc03738d15a0979671 290 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 6 267 31.177 T 12-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 Vc3S01_2507 74b58d386c15fdbc03738d15a0979671 290 Pfam PF00288 GHMP kinases N terminal domain 88 145 1.2E-7 T 12-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 Vc3S01_2507 74b58d386c15fdbc03738d15a0979671 290 SUPERFAMILY SSF55060 162 277 7.67E-36 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Vc3S01_2507 74b58d386c15fdbc03738d15a0979671 290 Pfam PF08544 GHMP kinases C terminal 204 260 1.4E-6 T 12-10-2018 IPR013750 GHMP kinase, C-terminal domain Vc3S01_2507 74b58d386c15fdbc03738d15a0979671 290 Gene3D G3DSA:3.30.70.890 162 280 1.3E-29 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Vc3S01_2507 74b58d386c15fdbc03738d15a0979671 290 Gene3D G3DSA:3.30.230.10 2 160 3.7E-53 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Vc3S01_2507 74b58d386c15fdbc03738d15a0979671 290 PIRSF PIRSF010376 4 280 1.2E-86 T 12-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 Vc3S01_2214 d928ddf9c62832402db01bac964a9996 445 Gene3D G3DSA:1.10.10.10 29 123 4.2E-45 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_2214 d928ddf9c62832402db01bac964a9996 445 PIRSF PIRSF018282 1 445 3.6E-248 T 12-10-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 Vc3S01_2214 d928ddf9c62832402db01bac964a9996 445 Pfam PF17193 MukF C-terminal domain 288 445 2.1E-77 T 12-10-2018 IPR033441 Chromosome partition protein MukF, C-terminal domain Vc3S01_2214 d928ddf9c62832402db01bac964a9996 445 Hamap MF_01803 Chromosome partition protein MukF [mukF]. 6 445 54.589 T 12-10-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 Vc3S01_2214 d928ddf9c62832402db01bac964a9996 445 Gene3D G3DSA:1.20.58.590 124 316 2.6E-80 T 12-10-2018 IPR036141 MukF, middle domain superfamily Vc3S01_2214 d928ddf9c62832402db01bac964a9996 445 Pfam PF17192 MukF middle domain 126 286 4.8E-78 T 12-10-2018 IPR033440 Chromosome partition protein MukF, middle domain Vc3S01_2214 d928ddf9c62832402db01bac964a9996 445 Pfam PF03882 MukF winged-helix domain 10 122 3.0E-53 T 12-10-2018 IPR033439 Chromosome partition protein MukF, winged-helix domain Vc3S01_2214 d928ddf9c62832402db01bac964a9996 445 SUPERFAMILY SSF46785 13 123 2.24E-44 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_2214 d928ddf9c62832402db01bac964a9996 445 SUPERFAMILY SSF140570 124 286 8.89E-76 T 12-10-2018 IPR036141 MukF, middle domain superfamily Vc3S01_2214 d928ddf9c62832402db01bac964a9996 445 Gene3D G3DSA:1.10.225.40 358 445 1.5E-37 T 12-10-2018 IPR038198 MukF, C-terminal domain superfamily Vc3S01_A0016 ac197fcb6268e6043901cd09d598edb2 297 SUPERFAMILY SSF111369 2 192 1.31E-12 T 12-10-2018 Vc3S01_A0016 ac197fcb6268e6043901cd09d598edb2 297 Gene3D G3DSA:1.10.287.470 25 119 9.2E-15 T 12-10-2018 Vc3S01_A0016 ac197fcb6268e6043901cd09d598edb2 297 Gene3D G3DSA:2.40.50.100 2 121 9.2E-15 T 12-10-2018 Vc3S01_A0016 ac197fcb6268e6043901cd09d598edb2 297 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 2 218 2.1E-14 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Vc3S01_A0016 ac197fcb6268e6043901cd09d598edb2 297 Gene3D G3DSA:2.40.30.170 160 277 6.1E-19 T 12-10-2018 Vc3S01_0721 5907d8b5a0e108ea7089f9fce77df4f1 324 Pfam PF03595 Voltage-dependent anion channel 19 306 3.9E-31 T 12-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 Vc3S01_0721 5907d8b5a0e108ea7089f9fce77df4f1 324 Gene3D G3DSA:1.50.10.150 5 318 3.0E-44 T 12-10-2018 IPR038665 Voltage-dependent anion channel superfamily Vc3S01_A0954 d5a618002e7260703dac3975c60ed72d 111 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 5 105 6.3E-34 T 12-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 Vc3S01_A0954 d5a618002e7260703dac3975c60ed72d 111 SUPERFAMILY SSF50022 5 106 2.94E-33 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Vc3S01_A0954 d5a618002e7260703dac3975c60ed72d 111 Gene3D G3DSA:2.102.10.10 1 111 1.1E-33 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Vc3S01_A0954 d5a618002e7260703dac3975c60ed72d 111 Pfam PF13806 Rieske-like [2Fe-2S] domain 7 105 4.4E-33 T 12-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 Vc3S01_A0314 7ea8bdd27b63cadd0cf291b348b73477 145 Gene3D G3DSA:1.20.58.300 6 135 2.0E-20 T 12-10-2018 Vc3S01_A0314 7ea8bdd27b63cadd0cf291b348b73477 145 Pfam PF05130 FlgN protein 7 134 7.6E-15 T 12-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 Vc3S01_A0314 7ea8bdd27b63cadd0cf291b348b73477 145 SUPERFAMILY SSF140566 7 136 2.35E-27 T 12-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 Vc3S01_3041 66fc5f3efb1bdb4beb0513d41e55dd45 239 SMART SM00862 156 232 1.3E-21 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Vc3S01_3041 66fc5f3efb1bdb4beb0513d41e55dd45 239 SUPERFAMILY SSF46894 132 234 5.1E-27 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Vc3S01_3041 66fc5f3efb1bdb4beb0513d41e55dd45 239 Gene3D G3DSA:1.10.10.10 130 239 9.8E-39 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_3041 66fc5f3efb1bdb4beb0513d41e55dd45 239 SUPERFAMILY SSF52172 3 126 5.41E-42 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_3041 66fc5f3efb1bdb4beb0513d41e55dd45 239 Gene3D G3DSA:3.40.50.2300 1 125 4.1E-40 T 12-10-2018 Vc3S01_3041 66fc5f3efb1bdb4beb0513d41e55dd45 239 SMART SM00448 5 116 3.8E-45 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_3041 66fc5f3efb1bdb4beb0513d41e55dd45 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 1.3E-22 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Vc3S01_3041 66fc5f3efb1bdb4beb0513d41e55dd45 239 Pfam PF00072 Response regulator receiver domain 7 117 2.1E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_0871 7eb529a2ca6905d821c2d12b75405675 244 PIRSF PIRSF000770 2 243 6.0E-38 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Vc3S01_0871 7eb529a2ca6905d821c2d12b75405675 244 Pfam PF04542 Sigma-70 region 2 19 91 2.3E-16 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Vc3S01_0871 7eb529a2ca6905d821c2d12b75405675 244 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 7 240 62.725 T 12-10-2018 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 Vc3S01_0871 7eb529a2ca6905d821c2d12b75405675 244 PRINTS PR00046 Major sigma-70 factor signature 46 59 3.8E-12 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Vc3S01_0871 7eb529a2ca6905d821c2d12b75405675 244 PRINTS PR00046 Major sigma-70 factor signature 207 222 3.8E-12 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Vc3S01_0871 7eb529a2ca6905d821c2d12b75405675 244 PRINTS PR00046 Major sigma-70 factor signature 222 233 3.8E-12 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Vc3S01_0871 7eb529a2ca6905d821c2d12b75405675 244 PRINTS PR00046 Major sigma-70 factor signature 190 202 3.8E-12 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Vc3S01_0871 7eb529a2ca6905d821c2d12b75405675 244 Gene3D G3DSA:1.10.1740.10 5 88 2.4E-28 T 12-10-2018 Vc3S01_0871 7eb529a2ca6905d821c2d12b75405675 244 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 237 7.5E-33 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Vc3S01_0871 7eb529a2ca6905d821c2d12b75405675 244 Pfam PF04539 Sigma-70 region 3 100 161 2.7E-11 T 12-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 Vc3S01_0871 7eb529a2ca6905d821c2d12b75405675 244 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 19 238 2.8E-86 T 12-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 Vc3S01_0871 7eb529a2ca6905d821c2d12b75405675 244 Gene3D G3DSA:1.20.140.160 90 239 2.2E-45 T 12-10-2018 Vc3S01_0871 7eb529a2ca6905d821c2d12b75405675 244 SUPERFAMILY SSF88659 155 239 1.59E-20 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Vc3S01_0871 7eb529a2ca6905d821c2d12b75405675 244 Pfam PF04545 Sigma-70, region 4 187 234 2.7E-19 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Vc3S01_0871 7eb529a2ca6905d821c2d12b75405675 244 SUPERFAMILY SSF88659 92 164 2.05E-15 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Vc3S01_0871 7eb529a2ca6905d821c2d12b75405675 244 SUPERFAMILY SSF88946 6 91 1.44E-24 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Vc3S01_1934 29003722b6ee4aadc913b4e861532b62 311 Pfam PF01381 Helix-turn-helix 6 61 2.8E-6 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Vc3S01_1934 29003722b6ee4aadc913b4e861532b62 311 Gene3D G3DSA:1.10.260.40 1 90 5.6E-11 T 12-10-2018 Vc3S01_1934 29003722b6ee4aadc913b4e861532b62 311 SUPERFAMILY SSF47413 1 66 3.66E-8 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Vc3S01_1934 29003722b6ee4aadc913b4e861532b62 311 SMART SM00530 5 66 0.0028 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Vc3S01_1913 d165c7858245845f7fd0466544ed120a 130 SUPERFAMILY SSF52540 21 97 3.72E-7 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_1913 d165c7858245845f7fd0466544ed120a 130 Gene3D G3DSA:3.40.50.300 14 123 7.9E-11 T 12-10-2018 Vc3S01_1913 d165c7858245845f7fd0466544ed120a 130 Pfam PF03846 Cell division inhibitor SulA 16 96 1.0E-6 T 12-10-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 Vc3S01_0822 dddabf0ab5f2d8ec9d372a5fdd4e5ef1 484 SMART SM00028 426 459 100.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_0822 dddabf0ab5f2d8ec9d372a5fdd4e5ef1 484 SMART SM00028 307 340 30.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_0822 dddabf0ab5f2d8ec9d372a5fdd4e5ef1 484 SMART SM00028 341 374 18.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_0822 dddabf0ab5f2d8ec9d372a5fdd4e5ef1 484 Gene3D G3DSA:1.25.40.10 272 469 9.7E-19 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_0822 dddabf0ab5f2d8ec9d372a5fdd4e5ef1 484 Pfam PF14559 Tetratricopeptide repeat 352 417 3.6E-10 T 12-10-2018 Vc3S01_0822 dddabf0ab5f2d8ec9d372a5fdd4e5ef1 484 Pfam PF01435 Peptidase family M48 70 252 1.3E-26 T 12-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 Vc3S01_0822 dddabf0ab5f2d8ec9d372a5fdd4e5ef1 484 Gene3D G3DSA:3.30.2010.10 73 149 9.6E-7 T 12-10-2018 Vc3S01_0822 dddabf0ab5f2d8ec9d372a5fdd4e5ef1 484 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 3 483 39.565 T 12-10-2018 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 Vc3S01_0822 dddabf0ab5f2d8ec9d372a5fdd4e5ef1 484 Pfam PF13432 Tetratricopeptide repeat 303 341 0.01 T 12-10-2018 Vc3S01_0822 dddabf0ab5f2d8ec9d372a5fdd4e5ef1 484 SUPERFAMILY SSF48452 311 455 1.96E-17 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_A2056 eb8932db808dab6c640286b8c7a3d47a 672 Pfam PF13718 GNAT acetyltransferase 2 378 491 5.0E-19 T 12-10-2018 IPR000182 GNAT domain Vc3S01_A2056 eb8932db808dab6c640286b8c7a3d47a 672 Hamap MF_01886 tRNA(Met) cytidine acetyltransferase TmcA [tmcA]. 19 670 39.68 T 12-10-2018 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA GO:0000049|GO:0002101|GO:0051391|GO:0051392 Vc3S01_A2056 eb8932db808dab6c640286b8c7a3d47a 672 Gene3D G3DSA:3.40.630.30 336 540 8.1E-67 T 12-10-2018 Vc3S01_A2056 eb8932db808dab6c640286b8c7a3d47a 672 Gene3D G3DSA:3.40.50.12320 175 333 8.8E-47 T 12-10-2018 Vc3S01_A2056 eb8932db808dab6c640286b8c7a3d47a 672 Pfam PF05127 Helicase 176 343 1.9E-58 T 12-10-2018 IPR007807 Helicase domain Reactome: R-HSA-6790901 Vc3S01_A2056 eb8932db808dab6c640286b8c7a3d47a 672 Pfam PF08351 Domain of unknown function (DUF1726) 69 118 2.7E-5 T 12-10-2018 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal Reactome: R-HSA-6790901 Vc3S01_A2056 eb8932db808dab6c640286b8c7a3d47a 672 SUPERFAMILY SSF52540 130 286 2.34E-14 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A2056 eb8932db808dab6c640286b8c7a3d47a 672 SUPERFAMILY SSF55729 382 539 1.06E-12 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_A2056 eb8932db808dab6c640286b8c7a3d47a 672 Gene3D G3DSA:3.40.50.11040 3 174 8.1E-18 T 12-10-2018 Vc3S01_2031 fe8e61f33f392d3972eb53ad1bd7c894 369 SUPERFAMILY SSF46626 282 361 5.74E-5 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Vc3S01_2031 fe8e61f33f392d3972eb53ad1bd7c894 369 PIRSF PIRSF000014 1 369 7.9E-152 T 12-10-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 Vc3S01_2031 fe8e61f33f392d3972eb53ad1bd7c894 369 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 2 162 5.6E-69 T 12-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal Vc3S01_2031 fe8e61f33f392d3972eb53ad1bd7c894 369 Gene3D G3DSA:1.10.3820.10 1 167 2.3E-37 T 12-10-2018 IPR038266 NapC/NirT cytochrome c superfamily Vc3S01_2031 fe8e61f33f392d3972eb53ad1bd7c894 369 SUPERFAMILY SSF48695 2 162 5.15E-56 T 12-10-2018 IPR036280 Multiheme cytochrome superfamily Vc3S01_2031 fe8e61f33f392d3972eb53ad1bd7c894 369 TIGRFAM TIGR02162 torC: trimethylamine-N-oxide reductase c-type cytochrome TorC 2 369 7.9E-177 T 12-10-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 Vc3S01_A1975 f5402e0e9196e49915a49d0556218c29 185 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 185 8.6E-105 T 12-10-2018 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Vc3S01_A1975 f5402e0e9196e49915a49d0556218c29 185 Gene3D G3DSA:3.40.30.10 1 184 6.0E-63 T 12-10-2018 Vc3S01_A1975 f5402e0e9196e49915a49d0556218c29 185 SUPERFAMILY SSF52833 2 184 4.54E-56 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Vc3S01_A1975 f5402e0e9196e49915a49d0556218c29 185 Pfam PF00578 AhpC/TSA family 4 131 3.1E-35 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Vc3S01_A1975 f5402e0e9196e49915a49d0556218c29 185 PIRSF PIRSF000239 1 185 1.3E-53 T 12-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Vc3S01_A1975 f5402e0e9196e49915a49d0556218c29 185 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 154 179 7.9E-7 T 12-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Vc3S01_0811 903b364ff40514c8dd2d6c74bb528799 814 SUPERFAMILY SSF47203 361 508 6.93E-23 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Vc3S01_0811 903b364ff40514c8dd2d6c74bb528799 814 Gene3D G3DSA:2.40.110.10 237 360 8.3E-100 T 12-10-2018 Vc3S01_0811 903b364ff40514c8dd2d6c74bb528799 814 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 361 508 3.4E-13 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Vc3S01_0811 903b364ff40514c8dd2d6c74bb528799 814 Gene3D G3DSA:1.10.540.10 123 236 8.3E-100 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Vc3S01_0811 903b364ff40514c8dd2d6c74bb528799 814 Pfam PF09317 Domain of unknown function (DUF1974) 515 796 9.0E-115 T 12-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 Vc3S01_0811 903b364ff40514c8dd2d6c74bb528799 814 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 146 234 6.2E-16 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Vc3S01_0811 903b364ff40514c8dd2d6c74bb528799 814 Gene3D G3DSA:1.20.140.10 361 508 8.3E-100 T 12-10-2018 Vc3S01_0811 903b364ff40514c8dd2d6c74bb528799 814 SUPERFAMILY SSF56645 122 356 1.07E-43 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Vc3S01_A1807 95818e649ebe6432e95919ba6727aa59 152 SUPERFAMILY SSF55729 11 145 9.95E-27 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_A1807 95818e649ebe6432e95919ba6727aa59 152 Gene3D G3DSA:3.40.630.30 1 152 1.6E-42 T 12-10-2018 Vc3S01_A1807 95818e649ebe6432e95919ba6727aa59 152 Pfam PF00583 Acetyltransferase (GNAT) family 28 129 9.9E-14 T 12-10-2018 IPR000182 GNAT domain Vc3S01_2288 31055a68d0b2d09c09b6bd5af04d75eb 665 Gene3D G3DSA:3.30.70.270 504 660 2.5E-31 T 12-10-2018 Vc3S01_2288 31055a68d0b2d09c09b6bd5af04d75eb 665 Gene3D G3DSA:3.40.190.10 115 180 4.1E-7 T 12-10-2018 Vc3S01_2288 31055a68d0b2d09c09b6bd5af04d75eb 665 Gene3D G3DSA:3.40.190.10 336 433 6.6E-19 T 12-10-2018 Vc3S01_2288 31055a68d0b2d09c09b6bd5af04d75eb 665 SUPERFAMILY SSF53850 255 469 1.68E-22 T 12-10-2018 Vc3S01_2288 31055a68d0b2d09c09b6bd5af04d75eb 665 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 259 434 3.0E-18 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Vc3S01_2288 31055a68d0b2d09c09b6bd5af04d75eb 665 SMART SM00062 29 222 2.2E-4 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Vc3S01_2288 31055a68d0b2d09c09b6bd5af04d75eb 665 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 509 659 8.1E-28 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_2288 31055a68d0b2d09c09b6bd5af04d75eb 665 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 172 5.2E-17 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Vc3S01_2288 31055a68d0b2d09c09b6bd5af04d75eb 665 SMART SM00267 500 661 9.4E-22 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_2288 31055a68d0b2d09c09b6bd5af04d75eb 665 Pfam PF00990 Diguanylate cyclase, GGDEF domain 512 657 8.5E-26 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_2288 31055a68d0b2d09c09b6bd5af04d75eb 665 Gene3D G3DSA:3.40.190.10 40 114 2.8E-9 T 12-10-2018 Vc3S01_2288 31055a68d0b2d09c09b6bd5af04d75eb 665 SUPERFAMILY SSF55073 516 657 7.85E-27 T 12-10-2018 IPR029787 Nucleotide cyclase Vc3S01_2288 31055a68d0b2d09c09b6bd5af04d75eb 665 SUPERFAMILY SSF53850 44 221 4.04E-22 T 12-10-2018 Vc3S01_2288 31055a68d0b2d09c09b6bd5af04d75eb 665 Gene3D G3DSA:3.40.190.10 258 458 6.6E-19 T 12-10-2018 Vc3S01_0606 2e38d11f6445c01d1cfedac3a6badf99 341 Pfam PF05175 Methyltransferase small domain 172 336 1.3E-60 T 12-10-2018 IPR007848 Methyltransferase small domain GO:0008168 Vc3S01_0606 2e38d11f6445c01d1cfedac3a6badf99 341 Gene3D G3DSA:3.40.50.150 1 157 2.4E-49 T 12-10-2018 Vc3S01_0606 2e38d11f6445c01d1cfedac3a6badf99 341 SUPERFAMILY SSF53335 152 332 7.63E-27 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Vc3S01_0606 2e38d11f6445c01d1cfedac3a6badf99 341 Pfam PF08468 Methyltransferase small domain N-terminal 8 163 1.1E-56 T 12-10-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 Vc3S01_0606 2e38d11f6445c01d1cfedac3a6badf99 341 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 4 340 46.649 T 12-10-2018 IPR023543 rRNA small subunit methyltransferase C GO:0008649 Vc3S01_0606 2e38d11f6445c01d1cfedac3a6badf99 341 Gene3D G3DSA:3.40.50.150 158 341 2.8E-41 T 12-10-2018 Vc3S01_0606 2e38d11f6445c01d1cfedac3a6badf99 341 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 269 275 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Vc3S01_A0163 e5beb73ae0639faa7330d8e90dde8f4c 312 Gene3D G3DSA:3.40.190.10 183 281 2.6E-44 T 12-10-2018 Vc3S01_A0163 e5beb73ae0639faa7330d8e90dde8f4c 312 Pfam PF03466 LysR substrate binding domain 99 307 3.7E-14 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_A0163 e5beb73ae0639faa7330d8e90dde8f4c 312 SUPERFAMILY SSF46785 10 88 2.18E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A0163 e5beb73ae0639faa7330d8e90dde8f4c 312 Gene3D G3DSA:1.10.10.10 3 91 6.2E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A0163 e5beb73ae0639faa7330d8e90dde8f4c 312 SUPERFAMILY SSF53850 93 308 6.21E-34 T 12-10-2018 Vc3S01_A0163 e5beb73ae0639faa7330d8e90dde8f4c 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 48 2.4E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A0163 e5beb73ae0639faa7330d8e90dde8f4c 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 27 38 2.4E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A0163 e5beb73ae0639faa7330d8e90dde8f4c 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 48 59 2.4E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A0163 e5beb73ae0639faa7330d8e90dde8f4c 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 70 1.1E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A0163 e5beb73ae0639faa7330d8e90dde8f4c 312 Gene3D G3DSA:3.40.190.10 95 305 2.6E-44 T 12-10-2018 Vc3S01_2784 73b061e0e3ce9007b79ac06589925a96 105 Pfam PF04999 Cell division protein FtsL 8 103 9.0E-36 T 12-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 Vc3S01_2784 73b061e0e3ce9007b79ac06589925a96 105 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 23 102 8.8E-25 T 12-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 Vc3S01_2784 73b061e0e3ce9007b79ac06589925a96 105 Hamap MF_00910 Cell division protein FtsL [ftsL]. 19 102 15.986 T 12-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 Vc3S01_0498 0917a48fca7c5f102df356fc064f4449 102 SUPERFAMILY SSF102829 6 95 6.15E-24 T 12-10-2018 IPR036192 Cell division protein ZapA-like superfamily Vc3S01_0498 0917a48fca7c5f102df356fc064f4449 102 Gene3D G3DSA:1.10.20.30 1 47 8.3E-19 T 12-10-2018 Vc3S01_0498 0917a48fca7c5f102df356fc064f4449 102 Pfam PF05164 Cell division protein ZapA 6 89 4.9E-19 T 12-10-2018 IPR007838 Cell division protein ZapA-like Vc3S01_0660 b8274171fd4e904e45a2ef0e487753cc 309 Gene3D G3DSA:1.10.10.10 7 94 4.0E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_0660 b8274171fd4e904e45a2ef0e487753cc 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 9.6E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_0660 b8274171fd4e904e45a2ef0e487753cc 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 9.6E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_0660 b8274171fd4e904e45a2ef0e487753cc 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 9.6E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_0660 b8274171fd4e904e45a2ef0e487753cc 309 Gene3D G3DSA:3.40.190.10 103 286 3.9E-43 T 12-10-2018 Vc3S01_0660 b8274171fd4e904e45a2ef0e487753cc 309 SUPERFAMILY SSF53850 95 293 1.63E-32 T 12-10-2018 Vc3S01_0660 b8274171fd4e904e45a2ef0e487753cc 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 8.9E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_0660 b8274171fd4e904e45a2ef0e487753cc 309 Gene3D G3DSA:3.40.190.10 163 259 3.9E-43 T 12-10-2018 Vc3S01_0660 b8274171fd4e904e45a2ef0e487753cc 309 Pfam PF03466 LysR substrate binding domain 94 290 2.0E-27 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_0660 b8274171fd4e904e45a2ef0e487753cc 309 SUPERFAMILY SSF46785 4 87 8.7E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_0882 5829a4e4b0eeb824a26cd652eb67ae01 247 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 45 228 1.6E-85 T 12-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 Vc3S01_0882 5829a4e4b0eeb824a26cd652eb67ae01 247 Pfam PF01578 Cytochrome C assembly protein 29 184 2.8E-32 T 12-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 Vc3S01_0882 5829a4e4b0eeb824a26cd652eb67ae01 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 100 120 3.8E-65 T 12-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 Vc3S01_0882 5829a4e4b0eeb824a26cd652eb67ae01 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 156 182 3.8E-65 T 12-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 Vc3S01_0882 5829a4e4b0eeb824a26cd652eb67ae01 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 62 82 3.8E-65 T 12-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 Vc3S01_0882 5829a4e4b0eeb824a26cd652eb67ae01 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 121 141 3.8E-65 T 12-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 Vc3S01_0882 5829a4e4b0eeb824a26cd652eb67ae01 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 204 228 3.8E-65 T 12-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 Vc3S01_0882 5829a4e4b0eeb824a26cd652eb67ae01 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 45 62 3.8E-65 T 12-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 Vc3S01_1355 3d10e540231ad6096d75bed5e71c5196 103 SUPERFAMILY SSF54909 1 69 2.75E-7 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel Vc3S01_A1495 c87fac84b41a0443eaef1ec9733d63c0 322 Gene3D G3DSA:2.40.160.10 22 322 1.6E-59 T 12-10-2018 IPR023614 Porin domain superfamily Vc3S01_A1495 c87fac84b41a0443eaef1ec9733d63c0 322 Pfam PF13609 Gram-negative porin 8 297 3.3E-27 T 12-10-2018 Vc3S01_A1495 c87fac84b41a0443eaef1ec9733d63c0 322 SUPERFAMILY SSF56935 22 322 1.1E-49 T 12-10-2018 Vc3S01_A1868 978280bf2d9407de0e415d517c69d174 204 Gene3D G3DSA:3.40.30.10 24 198 6.1E-36 T 12-10-2018 Vc3S01_A1868 978280bf2d9407de0e415d517c69d174 204 SUPERFAMILY SSF52833 47 196 7.27E-36 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Vc3S01_A1868 978280bf2d9407de0e415d517c69d174 204 Pfam PF02630 SCO1/SenC 53 177 9.7E-30 T 12-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A1049 8cdc2b92840a5b9763148ed1a544a532 582 ProSitePatterns PS00721 Formate--tetrahydrofolate ligase signature 1. 103 113 - T 12-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 Vc3S01_A1049 8cdc2b92840a5b9763148ed1a544a532 582 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 1 582 42.82 T 12-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 Vc3S01_A1049 8cdc2b92840a5b9763148ed1a544a532 582 Gene3D G3DSA:3.30.1510.10 129 264 1.2E-188 T 12-10-2018 Vc3S01_A1049 8cdc2b92840a5b9763148ed1a544a532 582 ProSitePatterns PS00722 Formate--tetrahydrofolate ligase signature 2. 345 356 - T 12-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 Vc3S01_A1049 8cdc2b92840a5b9763148ed1a544a532 582 Pfam PF01268 Formate--tetrahydrofolate ligase 3 581 1.8E-240 T 12-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 Vc3S01_A1049 8cdc2b92840a5b9763148ed1a544a532 582 Gene3D G3DSA:3.10.410.10 469 558 1.2E-29 T 12-10-2018 Vc3S01_A1049 8cdc2b92840a5b9763148ed1a544a532 582 Gene3D G3DSA:3.40.50.300 6 464 1.2E-188 T 12-10-2018 Vc3S01_A1049 8cdc2b92840a5b9763148ed1a544a532 582 SUPERFAMILY SSF52540 4 580 1.29E-216 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0799 bd88f6dcfef6ac2dba2933eace7893a8 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 12-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 Vc3S01_0799 bd88f6dcfef6ac2dba2933eace7893a8 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 12-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 Vc3S01_0799 bd88f6dcfef6ac2dba2933eace7893a8 112 PIRSF PIRSF039144 1 112 3.2E-58 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Vc3S01_0799 bd88f6dcfef6ac2dba2933eace7893a8 112 SUPERFAMILY SSF54913 1 112 3.81E-47 T 12-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Vc3S01_0799 bd88f6dcfef6ac2dba2933eace7893a8 112 SMART SM00938 4 105 1.6E-69 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Vc3S01_0799 bd88f6dcfef6ac2dba2933eace7893a8 112 Gene3D G3DSA:3.30.70.120 1 112 1.5E-48 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Vc3S01_0799 bd88f6dcfef6ac2dba2933eace7893a8 112 PRINTS PR00340 P-II protein signature 83 103 4.7E-44 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Vc3S01_0799 bd88f6dcfef6ac2dba2933eace7893a8 112 PRINTS PR00340 P-II protein signature 52 75 4.7E-44 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Vc3S01_0799 bd88f6dcfef6ac2dba2933eace7893a8 112 PRINTS PR00340 P-II protein signature 23 41 4.7E-44 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Vc3S01_0799 bd88f6dcfef6ac2dba2933eace7893a8 112 PRINTS PR00340 P-II protein signature 2 17 4.7E-44 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Vc3S01_0799 bd88f6dcfef6ac2dba2933eace7893a8 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.2E-44 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Vc3S01_0538 9755d864f8fd9a38631c48aa7b9046a9 395 SUPERFAMILY SSF53633 6 242 1.24E-73 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Vc3S01_0538 9755d864f8fd9a38631c48aa7b9046a9 395 Pfam PF00696 Amino acid kinase family 5 231 1.6E-52 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Vc3S01_0538 9755d864f8fd9a38631c48aa7b9046a9 395 ProSitePatterns PS00324 Aspartokinase signature. 7 15 - T 12-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Vc3S01_0538 9755d864f8fd9a38631c48aa7b9046a9 395 Gene3D G3DSA:3.40.1160.10 4 257 3.4E-85 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Vc3S01_0538 9755d864f8fd9a38631c48aa7b9046a9 395 PIRSF PIRSF000726 59 386 2.4E-73 T 12-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Vc3S01_0538 9755d864f8fd9a38631c48aa7b9046a9 395 PIRSF PIRSF000726 3 63 5.2E-23 T 12-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Vc3S01_0538 9755d864f8fd9a38631c48aa7b9046a9 395 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 65 379 2.1E-77 T 12-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Vc3S01_A0934 eb7e8cd62a062743606f491b00f9b1e3 309 Pfam PF06445 GyrI-like small molecule binding domain 165 306 9.6E-12 T 12-10-2018 IPR029442 GyrI-like small molecule binding domain Vc3S01_A0934 eb7e8cd62a062743606f491b00f9b1e3 309 Gene3D G3DSA:3.30.530.20 3 151 5.3E-15 T 12-10-2018 IPR023393 START-like domain superfamily Vc3S01_A0934 eb7e8cd62a062743606f491b00f9b1e3 309 Gene3D G3DSA:3.20.80.10 157 307 6.3E-24 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily Vc3S01_A0934 eb7e8cd62a062743606f491b00f9b1e3 309 SUPERFAMILY SSF55136 164 301 3.14E-15 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily Vc3S01_A0934 eb7e8cd62a062743606f491b00f9b1e3 309 SMART SM00871 158 309 1.4E-5 T 12-10-2018 IPR010499 Bacterial transcription activator, effector binding Vc3S01_A0934 eb7e8cd62a062743606f491b00f9b1e3 309 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 5 147 1.4E-20 T 12-10-2018 IPR019587 Polyketide cyclase/dehydrase Vc3S01_A0934 eb7e8cd62a062743606f491b00f9b1e3 309 SUPERFAMILY SSF55961 6 146 5.5E-14 T 12-10-2018 Vc3S01_2427 dcdd021e1c993a80a19823869fd7d299 92 Pfam PF10262 Rdx family 6 78 1.5E-31 T 12-10-2018 IPR011893 Selenoprotein, Rdx-type Vc3S01_2427 dcdd021e1c993a80a19823869fd7d299 92 SUPERFAMILY SSF52833 5 87 3.13E-29 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Vc3S01_2427 dcdd021e1c993a80a19823869fd7d299 92 Gene3D G3DSA:3.40.30.10 2 92 1.8E-39 T 12-10-2018 Vc3S01_2427 dcdd021e1c993a80a19823869fd7d299 92 TIGRFAM TIGR02174 CXXU_selWTH: selT/selW/selH selenoprotein domain 6 77 5.2E-25 T 12-10-2018 IPR011893 Selenoprotein, Rdx-type Vc3S01_0872 ed7f0576898261af5bc9c4ec32d232ec 126 Pfam PF00072 Response regulator receiver domain 7 119 2.2E-32 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_0872 ed7f0576898261af5bc9c4ec32d232ec 126 SMART SM00448 5 119 1.6E-35 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_0872 ed7f0576898261af5bc9c4ec32d232ec 126 Gene3D G3DSA:3.40.50.2300 1 126 8.7E-41 T 12-10-2018 Vc3S01_0872 ed7f0576898261af5bc9c4ec32d232ec 126 SUPERFAMILY SSF52172 3 124 2.7E-38 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_2719 ea4a233c6f60a7b43844481d56274038 172 PRINTS PR00502 NUDIX hydrolase family signature 47 62 3.4E-8 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Vc3S01_2719 ea4a233c6f60a7b43844481d56274038 172 PRINTS PR00502 NUDIX hydrolase family signature 33 47 3.4E-8 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Vc3S01_2719 ea4a233c6f60a7b43844481d56274038 172 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Vc3S01_2719 ea4a233c6f60a7b43844481d56274038 172 Gene3D G3DSA:3.90.79.10 1 159 7.6E-51 T 12-10-2018 Vc3S01_2719 ea4a233c6f60a7b43844481d56274038 172 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 37.547 T 12-10-2018 IPR022927 RNA pyrophosphohydrolase RppH Vc3S01_2719 ea4a233c6f60a7b43844481d56274038 172 SUPERFAMILY SSF55811 6 152 8.26E-32 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Vc3S01_2719 ea4a233c6f60a7b43844481d56274038 172 Pfam PF00293 NUDIX domain 7 145 6.1E-27 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Vc3S01_1547 0c6371ca158345d585d7e2153dcf6d28 228 SUPERFAMILY SSF52172 5 141 1.1E-31 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_1547 0c6371ca158345d585d7e2153dcf6d28 228 Pfam PF00072 Response regulator receiver domain 7 118 2.5E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_1547 0c6371ca158345d585d7e2153dcf6d28 228 Pfam PF12431 Transcriptional regulator 134 162 4.5E-7 T 12-10-2018 IPR028141 Transcriptional regulator Vc3S01_1547 0c6371ca158345d585d7e2153dcf6d28 228 PIRSF PIRSF006171 3 228 8.0E-80 T 12-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 Vc3S01_1547 0c6371ca158345d585d7e2153dcf6d28 228 Gene3D G3DSA:3.40.50.2300 3 149 2.4E-27 T 12-10-2018 Vc3S01_1547 0c6371ca158345d585d7e2153dcf6d28 228 SMART SM00448 5 118 2.2E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A1721 c6dbe51a2212560f55c87e412ce955e0 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 6.6E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A1721 c6dbe51a2212560f55c87e412ce955e0 294 SUPERFAMILY SSF53850 89 293 1.65E-30 T 12-10-2018 Vc3S01_A1721 c6dbe51a2212560f55c87e412ce955e0 294 SUPERFAMILY SSF46785 2 109 2.56E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A1721 c6dbe51a2212560f55c87e412ce955e0 294 Pfam PF03466 LysR substrate binding domain 89 291 6.4E-30 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_A1721 c6dbe51a2212560f55c87e412ce955e0 294 Gene3D G3DSA:3.40.190.290 93 294 5.2E-22 T 12-10-2018 Vc3S01_A1721 c6dbe51a2212560f55c87e412ce955e0 294 Gene3D G3DSA:1.10.10.10 1 92 7.7E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A0174 decf2bbf8021210253bcf3d24e08d055 305 SUPERFAMILY SSF103481 193 285 9.68E-13 T 12-10-2018 Vc3S01_A0174 decf2bbf8021210253bcf3d24e08d055 305 Pfam PF00892 EamA-like transporter family 9 135 3.6E-13 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Vc3S01_A0174 decf2bbf8021210253bcf3d24e08d055 305 Pfam PF00892 EamA-like transporter family 154 283 1.9E-13 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Vc3S01_A0174 decf2bbf8021210253bcf3d24e08d055 305 SUPERFAMILY SSF103481 37 138 1.96E-12 T 12-10-2018 Vc3S01_0971 8143e3f97b74cc5b5cf2a57a1b9c4470 478 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 7 457 7.4E-162 T 12-10-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 Vc3S01_0971 8143e3f97b74cc5b5cf2a57a1b9c4470 478 Pfam PF03553 Na+/H+ antiporter family 161 453 1.3E-65 T 12-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 Vc3S01_A0945 b593f7e047adfe55dbf48082c3f65bab 836 Gene3D G3DSA:3.40.50.740 18 466 4.8E-155 T 12-10-2018 Vc3S01_A0945 b593f7e047adfe55dbf48082c3f65bab 836 Pfam PF00384 Molybdopterin oxidoreductase 4 431 4.5E-78 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Vc3S01_A0945 b593f7e047adfe55dbf48082c3f65bab 836 Pfam PF04324 BFD-like [2Fe-2S] binding domain 766 815 6.5E-12 T 12-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain Vc3S01_A0945 b593f7e047adfe55dbf48082c3f65bab 836 Gene3D G3DSA:3.40.228.10 84 287 4.8E-155 T 12-10-2018 Vc3S01_A0945 b593f7e047adfe55dbf48082c3f65bab 836 SUPERFAMILY SSF53706 2 515 4.06E-148 T 12-10-2018 Vc3S01_A0945 b593f7e047adfe55dbf48082c3f65bab 836 SUPERFAMILY SSF50692 503 644 4.97E-23 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Vc3S01_A0945 b593f7e047adfe55dbf48082c3f65bab 836 Gene3D G3DSA:1.10.10.1100 766 821 1.1E-13 T 12-10-2018 Vc3S01_A0945 b593f7e047adfe55dbf48082c3f65bab 836 Pfam PF01568 Molydopterin dinucleotide binding domain 529 639 1.3E-18 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Vc3S01_A0945 b593f7e047adfe55dbf48082c3f65bab 836 Gene3D G3DSA:2.40.40.20 526 652 2.6E-22 T 12-10-2018 Vc3S01_A1383 a5d78cacd15f8d6b3614ad5694ba73d8 778 SMART SM00267 329 506 2.7E-42 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A1383 a5d78cacd15f8d6b3614ad5694ba73d8 778 SUPERFAMILY SSF55073 345 507 7.77E-39 T 12-10-2018 IPR029787 Nucleotide cyclase Vc3S01_A1383 a5d78cacd15f8d6b3614ad5694ba73d8 778 Gene3D G3DSA:3.20.20.450 518 772 8.7E-73 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_A1383 a5d78cacd15f8d6b3614ad5694ba73d8 778 Gene3D G3DSA:3.30.70.270 334 517 4.2E-47 T 12-10-2018 Vc3S01_A1383 a5d78cacd15f8d6b3614ad5694ba73d8 778 SMART SM00052 516 759 5.4E-72 T 12-10-2018 IPR001633 EAL domain Vc3S01_A1383 a5d78cacd15f8d6b3614ad5694ba73d8 778 Pfam PF00990 Diguanylate cyclase, GGDEF domain 340 502 5.0E-37 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A1383 a5d78cacd15f8d6b3614ad5694ba73d8 778 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 338 505 4.1E-32 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A1383 a5d78cacd15f8d6b3614ad5694ba73d8 778 Pfam PF00563 EAL domain 522 754 1.5E-62 T 12-10-2018 IPR001633 EAL domain Vc3S01_A1383 a5d78cacd15f8d6b3614ad5694ba73d8 778 SUPERFAMILY SSF141868 521 767 1.57E-67 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_1161 f4054b50b1534aeb2aa33311de5c4398 339 PIRSF PIRSF029594 1 330 1.5E-92 T 12-10-2018 IPR016926 Uncharacterised conserved protein UCP029594 Vc3S01_1161 f4054b50b1534aeb2aa33311de5c4398 339 Pfam PF11168 Protein of unknown function (DUF2955) 2 141 4.8E-46 T 12-10-2018 IPR022604 Protein of unknown function DUF2955 Vc3S01_1161 f4054b50b1534aeb2aa33311de5c4398 339 Pfam PF13515 Fusaric acid resistance protein-like 186 313 1.1E-6 T 12-10-2018 Vc3S01_A1207 6e035a7bf0e307d112b286b36e8b1527 180 Pfam PF02224 Cytidylate kinase 5 61 2.1E-4 T 12-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 Vc3S01_A1207 6e035a7bf0e307d112b286b36e8b1527 180 Gene3D G3DSA:3.40.50.300 1 150 5.3E-14 T 12-10-2018 Vc3S01_A1207 6e035a7bf0e307d112b286b36e8b1527 180 SUPERFAMILY SSF52540 2 132 7.31E-15 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A0292 03bda5e04dc4d907e486ed3742a5fcfc 368 Gene3D G3DSA:2.40.50.940 226 355 9.5E-17 T 12-10-2018 Vc3S01_A0292 03bda5e04dc4d907e486ed3742a5fcfc 368 TIGRFAM TIGR03265 PhnT2: putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein 5 358 3.3E-163 T 12-10-2018 IPR017666 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT2 GO:0005524 Vc3S01_A0292 03bda5e04dc4d907e486ed3742a5fcfc 368 Gene3D G3DSA:2.40.50.140 286 349 9.5E-17 T 12-10-2018 Vc3S01_A0292 03bda5e04dc4d907e486ed3742a5fcfc 368 SUPERFAMILY SSF50331 240 357 8.5E-12 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Vc3S01_A0292 03bda5e04dc4d907e486ed3742a5fcfc 368 Pfam PF00005 ABC transporter 23 165 1.8E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_A0292 03bda5e04dc4d907e486ed3742a5fcfc 368 Pfam PF08402 TOBE domain 279 354 1.2E-4 T 12-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Vc3S01_A0292 03bda5e04dc4d907e486ed3742a5fcfc 368 SUPERFAMILY SSF52540 8 247 4.92E-86 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A0292 03bda5e04dc4d907e486ed3742a5fcfc 368 Gene3D G3DSA:3.40.50.300 7 225 8.6E-69 T 12-10-2018 Vc3S01_A0292 03bda5e04dc4d907e486ed3742a5fcfc 368 SMART SM00382 32 215 1.8E-20 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_A0292 03bda5e04dc4d907e486ed3742a5fcfc 368 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_2686 d5a61c2488cd51408d71c09990026e2c 108 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 92 9.1E-23 T 12-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 Vc3S01_2686 d5a61c2488cd51408d71c09990026e2c 108 Gene3D G3DSA:3.30.160.100 1 105 1.8E-33 T 12-10-2018 IPR036567 Ribosome hibernation promotion factor-like Vc3S01_2686 d5a61c2488cd51408d71c09990026e2c 108 SUPERFAMILY SSF69754 1 102 2.75E-29 T 12-10-2018 IPR036567 Ribosome hibernation promotion factor-like Vc3S01_2686 d5a61c2488cd51408d71c09990026e2c 108 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 98 9.5E-31 T 12-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 Vc3S01_0609 3c9a526b0f82973d84f7fe232ebb6398 431 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 3 424 1.4E-194 T 12-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 Vc3S01_0609 3c9a526b0f82973d84f7fe232ebb6398 431 Gene3D G3DSA:3.40.640.10 69 317 6.1E-179 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Vc3S01_0609 3c9a526b0f82973d84f7fe232ebb6398 431 SUPERFAMILY SSF53383 2 423 3.56E-134 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Vc3S01_0609 3c9a526b0f82973d84f7fe232ebb6398 431 Pfam PF00202 Aminotransferase class-III 33 396 1.7E-76 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Vc3S01_0609 3c9a526b0f82973d84f7fe232ebb6398 431 Gene3D G3DSA:3.90.1150.10 7 419 6.1E-179 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Vc3S01_0609 3c9a526b0f82973d84f7fe232ebb6398 431 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Vc3S01_0609 3c9a526b0f82973d84f7fe232ebb6398 431 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 105.179 T 12-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 Vc3S01_A1759 a77e52d133344740045d51bde45f986f 943 Gene3D G3DSA:1.20.1610.10 579 785 5.7E-199 T 12-10-2018 Vc3S01_A1759 a77e52d133344740045d51bde45f986f 943 Gene3D G3DSA:1.20.1050.60 463 578 5.7E-199 T 12-10-2018 Vc3S01_A1759 a77e52d133344740045d51bde45f986f 943 Gene3D G3DSA:3.30.2080.10 383 913 5.7E-199 T 12-10-2018 Vc3S01_A1759 a77e52d133344740045d51bde45f986f 943 Gene3D G3DSA:2.70.98.10 87 462 5.7E-199 T 12-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 Vc3S01_A1759 a77e52d133344740045d51bde45f986f 943 Pfam PF07971 Glycosyl hydrolase family 92 320 910 1.3E-123 T 12-10-2018 IPR012939 Glycosyl hydrolase family 92 Vc3S01_A1759 a77e52d133344740045d51bde45f986f 943 SUPERFAMILY SSF48208 353 904 2.38E-10 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Vc3S01_A1759 a77e52d133344740045d51bde45f986f 943 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 441 914 4.6E-98 T 12-10-2018 IPR005887 Alpha-1,2-mannosidase, putative Vc3S01_A0312 3ed8db0e7a91aa4a9b4856e26c36298e 172 SUPERFAMILY SSF55811 9 142 5.15E-21 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Vc3S01_A0312 3ed8db0e7a91aa4a9b4856e26c36298e 172 Gene3D G3DSA:3.90.79.10 13 151 1.1E-25 T 12-10-2018 Vc3S01_A0312 3ed8db0e7a91aa4a9b4856e26c36298e 172 ProSitePatterns PS00893 Nudix box signature. 52 73 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Vc3S01_A0312 3ed8db0e7a91aa4a9b4856e26c36298e 172 Pfam PF00293 NUDIX domain 23 145 1.2E-15 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Vc3S01_0642 be4a71c3c43f1101dcbd31d5e92656e2 167 SUPERFAMILY SSF55729 1 127 3.77E-27 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_0642 be4a71c3c43f1101dcbd31d5e92656e2 167 Gene3D G3DSA:3.40.630.30 1 167 1.2E-46 T 12-10-2018 Vc3S01_0642 be4a71c3c43f1101dcbd31d5e92656e2 167 Pfam PF13527 Acetyltransferase (GNAT) domain 3 123 1.3E-10 T 12-10-2018 Vc3S01_1432 c54124762485e7dd8b31eded816299b3 936 Gene3D G3DSA:3.30.420.40 8 210 2.5E-32 T 12-10-2018 Vc3S01_1432 c54124762485e7dd8b31eded816299b3 936 Gene3D G3DSA:3.90.640.10 263 319 2.5E-32 T 12-10-2018 Vc3S01_1432 c54124762485e7dd8b31eded816299b3 936 Pfam PF00012 Hsp70 protein 90 316 2.9E-16 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Vc3S01_1432 c54124762485e7dd8b31eded816299b3 936 PRINTS PR00301 70kDa heat shock protein signature 232 242 3.5E-9 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Vc3S01_1432 c54124762485e7dd8b31eded816299b3 936 PRINTS PR00301 70kDa heat shock protein signature 399 419 3.5E-9 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Vc3S01_1432 c54124762485e7dd8b31eded816299b3 936 PRINTS PR00301 70kDa heat shock protein signature 165 185 3.5E-9 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Vc3S01_1432 c54124762485e7dd8b31eded816299b3 936 PRINTS PR00301 70kDa heat shock protein signature 6 19 3.5E-9 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Vc3S01_1432 c54124762485e7dd8b31eded816299b3 936 SUPERFAMILY SSF53067 223 457 1.56E-19 T 12-10-2018 Vc3S01_1432 c54124762485e7dd8b31eded816299b3 936 Gene3D G3DSA:3.30.420.40 219 262 2.5E-32 T 12-10-2018 Vc3S01_1432 c54124762485e7dd8b31eded816299b3 936 Pfam PF12531 DNA-K related protein 686 933 3.3E-102 T 12-10-2018 IPR021030 Protein of unknown function DUF3731 Vc3S01_1432 c54124762485e7dd8b31eded816299b3 936 SUPERFAMILY SSF53067 6 209 1.17E-29 T 12-10-2018 Vc3S01_0173 0a7db42ff1c3833195908cb2faf696c8 377 Pfam PF00571 CBS domain 261 313 2.7E-5 T 12-10-2018 IPR000644 CBS domain Vc3S01_0173 0a7db42ff1c3833195908cb2faf696c8 377 SUPERFAMILY SSF54631 181 315 9.39E-27 T 12-10-2018 Vc3S01_0173 0a7db42ff1c3833195908cb2faf696c8 377 Gene3D G3DSA:3.10.580.10 186 315 3.5E-42 T 12-10-2018 Vc3S01_0173 0a7db42ff1c3833195908cb2faf696c8 377 Pfam PF01595 Domain of unknown function DUF21 9 177 1.9E-29 T 12-10-2018 IPR002550 CNNM, transmembrane domain Vc3S01_A0141 53e08a06cf811601f8639c48ee660e39 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.7E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A0141 53e08a06cf811601f8639c48ee660e39 296 SUPERFAMILY SSF46785 3 81 2.72E-12 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A0141 53e08a06cf811601f8639c48ee660e39 296 Gene3D G3DSA:1.10.10.10 2 82 4.7E-12 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A0141 53e08a06cf811601f8639c48ee660e39 296 Gene3D G3DSA:3.40.190.290 93 294 1.2E-12 T 12-10-2018 Vc3S01_A0141 53e08a06cf811601f8639c48ee660e39 296 SUPERFAMILY SSF53850 90 294 7.87E-16 T 12-10-2018 Vc3S01_A0141 53e08a06cf811601f8639c48ee660e39 296 Pfam PF03466 LysR substrate binding domain 90 290 8.0E-10 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_0477 6763b7ed3a7a1844d32d6175d9f7d220 136 Gene3D G3DSA:3.30.420.140 1 133 5.2E-38 T 12-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 Vc3S01_0477 6763b7ed3a7a1844d32d6175d9f7d220 136 Pfam PF03652 Holliday junction resolvase 1 131 7.6E-35 T 12-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 Vc3S01_0477 6763b7ed3a7a1844d32d6175d9f7d220 136 SMART SM00732 1 99 1.6E-30 T 12-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 Vc3S01_0477 6763b7ed3a7a1844d32d6175d9f7d220 136 SUPERFAMILY SSF53098 1 132 4.4E-36 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Vc3S01_0477 6763b7ed3a7a1844d32d6175d9f7d220 136 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 1 131 2.2E-48 T 12-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 Vc3S01_0477 6763b7ed3a7a1844d32d6175d9f7d220 136 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 1 134 21.355 T 12-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 Vc3S01_2916 7fc5641f69291cbf481ff2b64259efcd 126 SUPERFAMILY SSF64263 1 119 5.36E-51 T 12-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_2916 7fc5641f69291cbf481ff2b64259efcd 126 Pfam PF01196 Ribosomal protein L17 20 116 1.0E-34 T 12-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_2916 7fc5641f69291cbf481ff2b64259efcd 126 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 5.5E-49 T 12-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_2916 7fc5641f69291cbf481ff2b64259efcd 126 Gene3D G3DSA:3.90.1030.10 1 117 4.0E-48 T 12-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_2916 7fc5641f69291cbf481ff2b64259efcd 126 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.798 T 12-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_2916 7fc5641f69291cbf481ff2b64259efcd 126 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 12-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_0103 5266bfb35b9b820688d780baf692ec3b 274 ProSitePatterns PS01229 Hypothetical cof family signature 2. 221 243 - T 12-10-2018 Vc3S01_0103 5266bfb35b9b820688d780baf692ec3b 274 Gene3D G3DSA:3.30.1240.10 91 195 6.5E-76 T 12-10-2018 Vc3S01_0103 5266bfb35b9b820688d780baf692ec3b 274 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 13 240 1.5E-34 T 12-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 Vc3S01_0103 5266bfb35b9b820688d780baf692ec3b 274 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 13 269 4.4E-61 T 12-10-2018 IPR000150 Cof family GO:0016787 Vc3S01_0103 5266bfb35b9b820688d780baf692ec3b 274 Gene3D G3DSA:3.40.50.1000 14 265 6.5E-76 T 12-10-2018 IPR023214 HAD superfamily Vc3S01_0103 5266bfb35b9b820688d780baf692ec3b 274 Pfam PF08282 haloacid dehalogenase-like hydrolase 14 269 4.8E-68 T 12-10-2018 Vc3S01_0103 5266bfb35b9b820688d780baf692ec3b 274 SUPERFAMILY SSF56784 12 273 8.95E-67 T 12-10-2018 IPR036412 HAD-like superfamily Vc3S01_0103 5266bfb35b9b820688d780baf692ec3b 274 ProSitePatterns PS01228 Hypothetical cof family signature 1. 13 24 - T 12-10-2018 Vc3S01_p20161 ec0feeb2fcb9662b0c4b7a3dab7252d9 94 SUPERFAMILY SSF46955 1 83 6.87E-18 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily Vc3S01_p20161 ec0feeb2fcb9662b0c4b7a3dab7252d9 94 Gene3D G3DSA:1.10.1660.10 1 91 1.1E-23 T 12-10-2018 Vc3S01_p20161 ec0feeb2fcb9662b0c4b7a3dab7252d9 94 Pfam PF09278 MerR, DNA binding 1 63 1.3E-18 T 12-10-2018 IPR015358 Transcription regulator MerR, DNA binding Vc3S01_2634 abd4241a71a6c2e65336674ce90feb1d 432 SUPERFAMILY SSF53187 106 427 9.73E-101 T 12-10-2018 Vc3S01_2634 abd4241a71a6c2e65336674ce90feb1d 432 PIRSF PIRSF036388 1 432 6.5E-223 T 12-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 Vc3S01_2634 abd4241a71a6c2e65336674ce90feb1d 432 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 109 422 1.1E-102 T 12-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 Vc3S01_2634 abd4241a71a6c2e65336674ce90feb1d 432 Pfam PF12404 Peptidase 5 81 4.8E-34 T 12-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 Vc3S01_2634 abd4241a71a6c2e65336674ce90feb1d 432 PRINTS PR00481 Cytosol aminopeptidase signature 213 234 3.0E-44 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Vc3S01_2634 abd4241a71a6c2e65336674ce90feb1d 432 PRINTS PR00481 Cytosol aminopeptidase signature 272 292 3.0E-44 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Vc3S01_2634 abd4241a71a6c2e65336674ce90feb1d 432 PRINTS PR00481 Cytosol aminopeptidase signature 191 208 3.0E-44 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Vc3S01_2634 abd4241a71a6c2e65336674ce90feb1d 432 PRINTS PR00481 Cytosol aminopeptidase signature 300 315 3.0E-44 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Vc3S01_2634 abd4241a71a6c2e65336674ce90feb1d 432 PRINTS PR00481 Cytosol aminopeptidase signature 250 271 3.0E-44 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Vc3S01_2634 abd4241a71a6c2e65336674ce90feb1d 432 Hamap MF_00504 Peptidase B [pepB]. 3 428 65.892 T 12-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 Vc3S01_2634 abd4241a71a6c2e65336674ce90feb1d 432 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 276 283 - T 12-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 Vc3S01_2634 abd4241a71a6c2e65336674ce90feb1d 432 Gene3D G3DSA:3.40.630.10 92 432 1.3E-106 T 12-10-2018 Vc3S01_0572 5a2f9ce2df6296c9618b90de914666ba 176 Pfam PF00156 Phosphoribosyl transferase domain 12 159 1.5E-25 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Vc3S01_0572 5a2f9ce2df6296c9618b90de914666ba 176 SUPERFAMILY SSF53271 3 175 3.41E-56 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like Vc3S01_0572 5a2f9ce2df6296c9618b90de914666ba 176 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 7 172 4.0E-74 T 12-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 Vc3S01_0572 5a2f9ce2df6296c9618b90de914666ba 176 Gene3D G3DSA:3.40.50.2020 1 176 4.5E-67 T 12-10-2018 Vc3S01_2421 4fe3ca07ee0d9ee369422b5d35bc04e5 321 Pfam PF00762 Ferrochelatase 7 320 2.0E-109 T 12-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 Vc3S01_2421 4fe3ca07ee0d9ee369422b5d35bc04e5 321 SUPERFAMILY SSF53800 5 320 4.45E-104 T 12-10-2018 Vc3S01_2421 4fe3ca07ee0d9ee369422b5d35bc04e5 321 ProSitePatterns PS00534 Ferrochelatase signature. 190 208 - T 12-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 Vc3S01_2421 4fe3ca07ee0d9ee369422b5d35bc04e5 321 Gene3D G3DSA:3.40.50.1400 9 321 8.7E-93 T 12-10-2018 Vc3S01_2421 4fe3ca07ee0d9ee369422b5d35bc04e5 321 Hamap MF_00323 Ferrochelatase [hemH]. 6 321 38.614 T 12-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 Vc3S01_2421 4fe3ca07ee0d9ee369422b5d35bc04e5 321 TIGRFAM TIGR00109 hemH: ferrochelatase 5 321 8.6E-105 T 12-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 Vc3S01_2421 4fe3ca07ee0d9ee369422b5d35bc04e5 321 Gene3D G3DSA:3.40.50.1400 164 302 8.7E-93 T 12-10-2018 Vc3S01_p20160 59551c66690166432546e4d1cf768530 225 PRINTS PR00400 Tetracycline repressor protein signature 193 207 1.9E-51 T 12-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 Vc3S01_p20160 59551c66690166432546e4d1cf768530 225 PRINTS PR00400 Tetracycline repressor protein signature 104 127 1.9E-51 T 12-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 Vc3S01_p20160 59551c66690166432546e4d1cf768530 225 PRINTS PR00400 Tetracycline repressor protein signature 84 103 1.9E-51 T 12-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 Vc3S01_p20160 59551c66690166432546e4d1cf768530 225 PRINTS PR00400 Tetracycline repressor protein signature 30 53 1.9E-51 T 12-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 Vc3S01_p20160 59551c66690166432546e4d1cf768530 225 PRINTS PR00400 Tetracycline repressor protein signature 139 158 1.9E-51 T 12-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 Vc3S01_p20160 59551c66690166432546e4d1cf768530 225 SUPERFAMILY SSF48498 78 210 2.45E-35 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Vc3S01_p20160 59551c66690166432546e4d1cf768530 225 ProSitePatterns PS01081 TetR-type HTH domain signature. 30 61 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Vc3S01_p20160 59551c66690166432546e4d1cf768530 225 Gene3D G3DSA:1.10.10.60 10 75 5.2E-29 T 12-10-2018 Vc3S01_p20160 59551c66690166432546e4d1cf768530 225 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 64 1.4E-15 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Vc3S01_p20160 59551c66690166432546e4d1cf768530 225 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 2.7E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Vc3S01_p20160 59551c66690166432546e4d1cf768530 225 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 2.7E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Vc3S01_p20160 59551c66690166432546e4d1cf768530 225 SUPERFAMILY SSF46689 16 74 8.72E-15 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_p20160 59551c66690166432546e4d1cf768530 225 Gene3D G3DSA:1.10.357.10 76 213 6.7E-36 T 12-10-2018 Vc3S01_p20160 59551c66690166432546e4d1cf768530 225 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 78 210 1.4E-40 T 12-10-2018 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 Vc3S01_A1650 ef1da215c4b2a6e1becdddd42871ea1c 352 PIRSF PIRSF026508 1 351 7.3E-71 T 12-10-2018 IPR008863 Toxic anion resistance Vc3S01_A1650 ef1da215c4b2a6e1becdddd42871ea1c 352 Pfam PF05816 Toxic anion resistance protein (TelA) 22 349 3.3E-79 T 12-10-2018 IPR008863 Toxic anion resistance Vc3S01_0635 508b384ebc7afa57c386d2cc61020e43 307 PIRSF PIRSF004654 1 296 1.6E-90 T 12-10-2018 IPR023605 Lipoprotein NlpI Vc3S01_0635 508b384ebc7afa57c386d2cc61020e43 307 SUPERFAMILY SSF48452 34 286 2.69E-69 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_0635 508b384ebc7afa57c386d2cc61020e43 307 Gene3D G3DSA:1.25.40.10 25 299 4.9E-81 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_0635 508b384ebc7afa57c386d2cc61020e43 307 SMART SM00028 238 271 33.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_0635 508b384ebc7afa57c386d2cc61020e43 307 SMART SM00028 134 167 84.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_0635 508b384ebc7afa57c386d2cc61020e43 307 SMART SM00028 100 133 0.0072 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_0635 508b384ebc7afa57c386d2cc61020e43 307 SMART SM00028 66 99 0.057 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_0091 8739f5557a75c3713e73c81ad6df9752 842 Pfam PF12633 Adenylate cyclase NT domain 5 198 2.9E-77 T 12-10-2018 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 Vc3S01_0091 8739f5557a75c3713e73c81ad6df9752 842 PIRSF PIRSF001444 1 842 0.0 T 12-10-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 Vc3S01_0091 8739f5557a75c3713e73c81ad6df9752 842 Pfam PF01295 Adenylate cyclase, class-I 226 828 1.0E-253 T 12-10-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 Vc3S01_2497 3a4920db136244ad9ca1b61d8e2241c6 384 SUPERFAMILY SSF55174 7 97 1.33E-14 T 12-10-2018 Vc3S01_2497 3a4920db136244ad9ca1b61d8e2241c6 384 SMART SM00363 7 65 1.1E-10 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_2497 3a4920db136244ad9ca1b61d8e2241c6 384 Pfam PF00849 RNA pseudouridylate synthase 67 193 4.9E-14 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Vc3S01_2497 3a4920db136244ad9ca1b61d8e2241c6 384 Gene3D G3DSA:3.30.70.580 68 227 1.4E-53 T 12-10-2018 Vc3S01_2497 3a4920db136244ad9ca1b61d8e2241c6 384 Gene3D G3DSA:3.30.70.1560 132 205 1.4E-53 T 12-10-2018 Vc3S01_2497 3a4920db136244ad9ca1b61d8e2241c6 384 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 102 116 - T 12-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 Vc3S01_2497 3a4920db136244ad9ca1b61d8e2241c6 384 Pfam PF01479 S4 domain 8 52 1.7E-10 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_2497 3a4920db136244ad9ca1b61d8e2241c6 384 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 71 223 9.3E-48 T 12-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 Vc3S01_2497 3a4920db136244ad9ca1b61d8e2241c6 384 Gene3D G3DSA:3.10.290.10 1 61 4.2E-22 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Vc3S01_2497 3a4920db136244ad9ca1b61d8e2241c6 384 SUPERFAMILY SSF55120 66 227 6.04E-38 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Vc3S01_1633 7ac101214e7f1d4b27340cf0f1266b53 868 Gene3D G3DSA:2.60.40.1730 15 193 9.8E-71 T 12-10-2018 Vc3S01_1633 7ac101214e7f1d4b27340cf0f1266b53 868 Gene3D G3DSA:1.10.1740.60 194 278 7.4E-40 T 12-10-2018 Vc3S01_1633 7ac101214e7f1d4b27340cf0f1266b53 868 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 443 544 8.2E-33 T 12-10-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold Vc3S01_1633 7ac101214e7f1d4b27340cf0f1266b53 868 SUPERFAMILY SSF63737 2 192 1.2E-46 T 12-10-2018 Vc3S01_1633 7ac101214e7f1d4b27340cf0f1266b53 868 Gene3D G3DSA:1.10.390.10 279 442 1.2E-63 T 12-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily Vc3S01_1633 7ac101214e7f1d4b27340cf0f1266b53 868 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 12 866 0.0 T 12-10-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 Vc3S01_1633 7ac101214e7f1d4b27340cf0f1266b53 868 Gene3D G3DSA:2.60.40.1840 443 544 6.8E-35 T 12-10-2018 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily Vc3S01_1633 7ac101214e7f1d4b27340cf0f1266b53 868 Gene3D G3DSA:1.25.50.10 545 867 2.1E-115 T 12-10-2018 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily Vc3S01_1633 7ac101214e7f1d4b27340cf0f1266b53 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 312 324 4.3E-9 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Vc3S01_1633 7ac101214e7f1d4b27340cf0f1266b53 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 175 190 4.3E-9 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Vc3S01_1633 7ac101214e7f1d4b27340cf0f1266b53 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 293 308 4.3E-9 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Vc3S01_1633 7ac101214e7f1d4b27340cf0f1266b53 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 257 267 4.3E-9 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Vc3S01_1633 7ac101214e7f1d4b27340cf0f1266b53 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 125 140 4.3E-9 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Vc3S01_1633 7ac101214e7f1d4b27340cf0f1266b53 868 SUPERFAMILY SSF55486 203 449 1.47E-73 T 12-10-2018 Vc3S01_1633 7ac101214e7f1d4b27340cf0f1266b53 868 Pfam PF01433 Peptidase family M1 domain 207 435 1.9E-56 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Vc3S01_1633 7ac101214e7f1d4b27340cf0f1266b53 868 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 547 866 9.4E-114 T 12-10-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal Vc3S01_1678 00012b9d938197e56b008a87bb771150 951 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 66 83 - T 12-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 Vc3S01_1678 00012b9d938197e56b008a87bb771150 951 Gene3D G3DSA:3.40.228.10 195 394 4.4E-132 T 12-10-2018 Vc3S01_1678 00012b9d938197e56b008a87bb771150 951 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 62 112 1.7E-11 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Vc3S01_1678 00012b9d938197e56b008a87bb771150 951 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 19 43 5.5E-4 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Vc3S01_1678 00012b9d938197e56b008a87bb771150 951 Pfam PF00384 Molybdopterin oxidoreductase 118 568 5.8E-55 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Vc3S01_1678 00012b9d938197e56b008a87bb771150 951 SUPERFAMILY SSF50692 752 951 1.97E-37 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Vc3S01_1678 00012b9d938197e56b008a87bb771150 951 PIRSF PIRSF036643 641 678 370.0 T 12-10-2018 Vc3S01_1678 00012b9d938197e56b008a87bb771150 951 PIRSF PIRSF036643 11 582 4.5E-113 T 12-10-2018 Vc3S01_1678 00012b9d938197e56b008a87bb771150 951 PIRSF PIRSF036643 779 950 9.3E-16 T 12-10-2018 Vc3S01_1678 00012b9d938197e56b008a87bb771150 951 Gene3D G3DSA:2.40.40.20 767 951 2.6E-47 T 12-10-2018 Vc3S01_1678 00012b9d938197e56b008a87bb771150 951 Pfam PF01568 Molydopterin dinucleotide binding domain 818 944 1.3E-19 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Vc3S01_1678 00012b9d938197e56b008a87bb771150 951 SMART SM00926 61 115 3.9E-16 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Vc3S01_1678 00012b9d938197e56b008a87bb771150 951 Gene3D G3DSA:2.20.25.90 62 114 3.1E-12 T 12-10-2018 Vc3S01_1678 00012b9d938197e56b008a87bb771150 951 SUPERFAMILY SSF53706 60 646 3.01E-200 T 12-10-2018 Vc3S01_1678 00012b9d938197e56b008a87bb771150 951 Gene3D G3DSA:3.40.50.740 126 617 4.4E-132 T 12-10-2018 Vc3S01_A1359 4115bf13a7b3c92ae891dec2deeaa119 174 ProSitePatterns PS01335 Methylglyoxal synthase active site. 88 96 - T 12-10-2018 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 Vc3S01_A1359 4115bf13a7b3c92ae891dec2deeaa119 174 SUPERFAMILY SSF52335 26 173 1.74E-57 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Vc3S01_A1359 4115bf13a7b3c92ae891dec2deeaa119 174 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 34 173 2.0E-64 T 12-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 Vc3S01_A1359 4115bf13a7b3c92ae891dec2deeaa119 174 SMART SM00851 48 141 1.8E-22 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain Vc3S01_A1359 4115bf13a7b3c92ae891dec2deeaa119 174 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 35 154 32.688 T 12-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 Vc3S01_A1359 4115bf13a7b3c92ae891dec2deeaa119 174 Gene3D G3DSA:3.40.50.1380 24 174 2.4E-65 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Vc3S01_A1359 4115bf13a7b3c92ae891dec2deeaa119 174 PIRSF PIRSF006614 31 174 2.0E-63 T 12-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 Vc3S01_A1359 4115bf13a7b3c92ae891dec2deeaa119 174 Pfam PF02142 MGS-like domain 48 141 5.1E-18 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain Vc3S01_A0024 f18a389bf3aaf0cc33e9c09587d6418b 263 Gene3D G3DSA:2.40.50.40 156 228 7.1E-9 T 12-10-2018 Vc3S01_A0024 f18a389bf3aaf0cc33e9c09587d6418b 263 SUPERFAMILY SSF52172 4 156 3.13E-31 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_A0024 f18a389bf3aaf0cc33e9c09587d6418b 263 SMART SM00448 5 117 3.4E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A0024 f18a389bf3aaf0cc33e9c09587d6418b 263 SMART SM00850 164 263 8.8E-18 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 Vc3S01_A0024 f18a389bf3aaf0cc33e9c09587d6418b 263 Gene3D G3DSA:3.40.50.2300 2 139 1.3E-32 T 12-10-2018 Vc3S01_A0024 f18a389bf3aaf0cc33e9c09587d6418b 263 Pfam PF00072 Response regulator receiver domain 8 114 1.1E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A0024 f18a389bf3aaf0cc33e9c09587d6418b 263 Pfam PF04397 LytTr DNA-binding domain 165 262 3.8E-24 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 Vc3S01_2636 c483b794fe55d19ecd4c6bd66f93fb12 112 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 13 91 4.1E-15 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Vc3S01_2636 c483b794fe55d19ecd4c6bd66f93fb12 112 PRINTS PR00355 Adrenodoxin signature 42 52 3.2E-10 T 12-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 Vc3S01_2636 c483b794fe55d19ecd4c6bd66f93fb12 112 PRINTS PR00355 Adrenodoxin signature 83 91 3.2E-10 T 12-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 Vc3S01_2636 c483b794fe55d19ecd4c6bd66f93fb12 112 PRINTS PR00355 Adrenodoxin signature 60 74 3.2E-10 T 12-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 Vc3S01_2636 c483b794fe55d19ecd4c6bd66f93fb12 112 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 110 4.8E-61 T 12-10-2018 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 Vc3S01_2636 c483b794fe55d19ecd4c6bd66f93fb12 112 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 12-10-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 Vc3S01_2636 c483b794fe55d19ecd4c6bd66f93fb12 112 Gene3D G3DSA:3.10.20.30 1 112 1.3E-36 T 12-10-2018 IPR012675 Beta-grasp domain superfamily Vc3S01_2636 c483b794fe55d19ecd4c6bd66f93fb12 112 SUPERFAMILY SSF54292 5 107 2.49E-32 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Vc3S01_A1627 a17a087ad9f5f2823497c147ca7a3aba 308 Pfam PF01297 Zinc-uptake complex component A periplasmic 49 301 2.3E-24 T 12-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 Vc3S01_A1627 a17a087ad9f5f2823497c147ca7a3aba 308 Gene3D G3DSA:3.40.50.1980 37 193 5.6E-19 T 12-10-2018 Vc3S01_A1627 a17a087ad9f5f2823497c147ca7a3aba 308 Gene3D G3DSA:3.40.50.1980 195 303 3.5E-6 T 12-10-2018 Vc3S01_A1627 a17a087ad9f5f2823497c147ca7a3aba 308 SUPERFAMILY SSF53807 29 300 4.02E-52 T 12-10-2018 Vc3S01_A1291 54e5a6483c7f299726f606dfb6f0cfae 150 SUPERFAMILY SSF46785 10 67 7.52E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A1291 54e5a6483c7f299726f606dfb6f0cfae 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 37 56 1.6E-15 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Vc3S01_A1291 54e5a6483c7f299726f606dfb6f0cfae 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 26 37 1.6E-15 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Vc3S01_A1291 54e5a6483c7f299726f606dfb6f0cfae 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 10 26 1.6E-15 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Vc3S01_A1291 54e5a6483c7f299726f606dfb6f0cfae 150 SMART SM00344 10 116 3.0E-26 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 Vc3S01_A1291 54e5a6483c7f299726f606dfb6f0cfae 150 Gene3D G3DSA:3.30.70.920 74 146 5.1E-15 T 12-10-2018 Vc3S01_A1291 54e5a6483c7f299726f606dfb6f0cfae 150 Pfam PF01037 Lrp/AsnC ligand binding domain 77 145 3.5E-12 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Vc3S01_A1291 54e5a6483c7f299726f606dfb6f0cfae 150 Pfam PF13404 AsnC-type helix-turn-helix domain 10 51 3.9E-14 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Vc3S01_A1291 54e5a6483c7f299726f606dfb6f0cfae 150 Gene3D G3DSA:1.10.10.10 3 63 7.4E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A1291 54e5a6483c7f299726f606dfb6f0cfae 150 SUPERFAMILY SSF54909 75 149 8.71E-12 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel Vc3S01_A1291 54e5a6483c7f299726f606dfb6f0cfae 150 ProSitePatterns PS00519 AsnC-type HTH domain signature. 28 54 - T 12-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site Vc3S01_A0017 ba27a57ee9ce564cd9303c470a127b47 306 SUPERFAMILY SSF53850 91 290 7.74E-30 T 12-10-2018 Vc3S01_A0017 ba27a57ee9ce564cd9303c470a127b47 306 Pfam PF03466 LysR substrate binding domain 91 290 7.4E-27 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_A0017 ba27a57ee9ce564cd9303c470a127b47 306 Gene3D G3DSA:1.10.10.10 7 94 9.2E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A0017 ba27a57ee9ce564cd9303c470a127b47 306 Gene3D G3DSA:3.40.190.290 95 291 3.4E-34 T 12-10-2018 Vc3S01_A0017 ba27a57ee9ce564cd9303c470a127b47 306 SUPERFAMILY SSF46785 7 92 1.2E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A0017 ba27a57ee9ce564cd9303c470a127b47 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 7.6E-14 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_1238 7c1268411ee0ec32b8b254ee99e69ca3 215 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 20 215 38.085 T 12-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Vc3S01_1238 7c1268411ee0ec32b8b254ee99e69ca3 215 Pfam PF00925 GTP cyclohydrolase II 36 188 3.7E-59 T 12-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Vc3S01_1238 7c1268411ee0ec32b8b254ee99e69ca3 215 Gene3D G3DSA:3.40.50.10990 21 191 7.1E-64 T 12-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Vc3S01_1238 7c1268411ee0ec32b8b254ee99e69ca3 215 SUPERFAMILY SSF142695 36 189 1.83E-54 T 12-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Vc3S01_2315 a9434b165396f5338feb718ec30576e6 194 Pfam PF13023 HD domain 11 158 1.8E-16 T 12-10-2018 IPR006674 HD domain Vc3S01_2315 a9434b165396f5338feb718ec30576e6 194 Hamap MF_01100 5'-deoxynucleotidase YfbR [yfbR]. 3 194 45.713 T 12-10-2018 IPR022971 5'-deoxynucleotidase YfbR KEGG: 00240+3.1.3.89 Vc3S01_2315 a9434b165396f5338feb718ec30576e6 194 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 80 176 7.0E-47 T 12-10-2018 Vc3S01_2315 a9434b165396f5338feb718ec30576e6 194 Gene3D G3DSA:1.10.3210.10 1 194 4.1E-84 T 12-10-2018 Vc3S01_2315 a9434b165396f5338feb718ec30576e6 194 SUPERFAMILY SSF109604 4 184 8.57E-44 T 12-10-2018 Vc3S01_2315 a9434b165396f5338feb718ec30576e6 194 SMART SM00471 26 151 6.6E-8 T 12-10-2018 IPR003607 HD/PDEase domain Vc3S01_1403 0197e3306fff77522351d4e26d96df20 153 PIRSF PIRSF028065 1 148 1.4E-71 T 12-10-2018 IPR016865 Inner membrane protein RclC Vc3S01_1403 0197e3306fff77522351d4e26d96df20 153 Pfam PF04224 Protein of unknown function, DUF417 2 145 4.0E-42 T 12-10-2018 IPR007339 Inner membrane protein RclC-like Vc3S01_0731 0c2e6b2acab37290da0d9879b268eee0 370 SMART SM00925 122 255 6.6E-66 T 12-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 Vc3S01_0731 0c2e6b2acab37290da0d9879b268eee0 370 SUPERFAMILY SSF50685 43 353 1.29E-101 T 12-10-2018 IPR036908 RlpA-like domain superfamily Vc3S01_0731 0c2e6b2acab37290da0d9879b268eee0 370 Pfam PF06725 3D domain 275 351 5.6E-21 T 12-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 Vc3S01_0731 0c2e6b2acab37290da0d9879b268eee0 370 Gene3D G3DSA:2.40.240.50 122 260 7.1E-135 T 12-10-2018 Vc3S01_0731 0c2e6b2acab37290da0d9879b268eee0 370 Gene3D G3DSA:2.40.40.10 54 351 7.1E-135 T 12-10-2018 IPR036908 RlpA-like domain superfamily Vc3S01_0731 0c2e6b2acab37290da0d9879b268eee0 370 Pfam PF03562 MltA specific insert domain 98 254 1.7E-37 T 12-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 Vc3S01_A0971 c79debd215f6507b1faf4876646fb155 184 SUPERFAMILY SSF82153 56 184 8.89E-18 T 12-10-2018 IPR036378 FAS1 domain superfamily Vc3S01_A0971 c79debd215f6507b1faf4876646fb155 184 SMART SM00554 81 184 5.7E-4 T 12-10-2018 IPR000782 FAS1 domain Vc3S01_A0971 c79debd215f6507b1faf4876646fb155 184 Gene3D G3DSA:2.30.180.10 50 184 1.1E-22 T 12-10-2018 IPR036378 FAS1 domain superfamily Vc3S01_A0971 c79debd215f6507b1faf4876646fb155 184 Pfam PF02469 Fasciclin domain 58 184 1.5E-17 T 12-10-2018 IPR000782 FAS1 domain Vc3S01_2387 f2fb0fff6bc77894d4993c007e3ee386 76 Pfam PF09012 FeoC like transcriptional regulator 2 54 4.2E-13 T 12-10-2018 IPR015102 Transcriptional regulator HTH-type, FeoC Vc3S01_2387 f2fb0fff6bc77894d4993c007e3ee386 76 Gene3D G3DSA:1.10.10.10 1 72 9.4E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_2387 f2fb0fff6bc77894d4993c007e3ee386 76 SUPERFAMILY SSF46785 1 55 1.28E-13 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A0039 90c5a66e8e6ce38b4963f1a5e9086047 123 SUPERFAMILY SSF46785 1 77 8.68E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A0039 90c5a66e8e6ce38b4963f1a5e9086047 123 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 73 1.6E-14 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Vc3S01_A0039 90c5a66e8e6ce38b4963f1a5e9086047 123 SMART SM00345 14 73 1.5E-11 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Vc3S01_A0039 90c5a66e8e6ce38b4963f1a5e9086047 123 Gene3D G3DSA:1.10.10.10 7 122 5.2E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_1797 4d8b1f7b9b5012e2bcde3f299eab4499 345 SUPERFAMILY SSF56529 83 339 1.5E-55 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 Vc3S01_1797 4d8b1f7b9b5012e2bcde3f299eab4499 345 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 88 339 1.7E-39 T 12-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 Vc3S01_1797 4d8b1f7b9b5012e2bcde3f299eab4499 345 Gene3D G3DSA:3.90.850.10 1 345 9.2E-136 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 Vc3S01_A0648 c74071128f41e3c85358e48cdd57fe13 151 Pfam PF13404 AsnC-type helix-turn-helix domain 1 42 7.7E-16 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Vc3S01_A0648 c74071128f41e3c85358e48cdd57fe13 151 SUPERFAMILY SSF54909 63 145 3.08E-14 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel Vc3S01_A0648 c74071128f41e3c85358e48cdd57fe13 151 Gene3D G3DSA:1.10.10.10 1 52 1.3E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A0648 c74071128f41e3c85358e48cdd57fe13 151 SUPERFAMILY SSF46785 1 55 1.29E-13 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A0648 c74071128f41e3c85358e48cdd57fe13 151 Pfam PF01037 Lrp/AsnC ligand binding domain 76 139 3.7E-13 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Vc3S01_A0648 c74071128f41e3c85358e48cdd57fe13 151 Gene3D G3DSA:3.30.70.920 58 148 2.6E-13 T 12-10-2018 Vc3S01_A0648 c74071128f41e3c85358e48cdd57fe13 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 9.5E-12 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Vc3S01_A0648 c74071128f41e3c85358e48cdd57fe13 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 9.5E-12 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Vc3S01_A0648 c74071128f41e3c85358e48cdd57fe13 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 9.5E-12 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Vc3S01_A0648 c74071128f41e3c85358e48cdd57fe13 151 SMART SM00344 1 110 4.7E-17 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 Vc3S01_2775 8f58f6bc4462e8b04a8e00c5673185f2 261 Pfam PF08478 POTRA domain, FtsQ-type 54 123 7.7E-17 T 12-10-2018 IPR013685 POTRA domain, FtsQ-type Vc3S01_2775 8f58f6bc4462e8b04a8e00c5673185f2 261 Gene3D G3DSA:3.40.50.11690 124 252 6.0E-37 T 12-10-2018 Vc3S01_2775 8f58f6bc4462e8b04a8e00c5673185f2 261 Pfam PF03799 Cell division protein FtsQ 127 239 3.4E-23 T 12-10-2018 IPR005548 Cell division protein FtsQ/DivIB Vc3S01_2775 8f58f6bc4462e8b04a8e00c5673185f2 261 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 23 247 22.599 T 12-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 Vc3S01_2775 8f58f6bc4462e8b04a8e00c5673185f2 261 Gene3D G3DSA:3.10.20.310 52 123 3.0E-24 T 12-10-2018 Vc3S01_0332 93cb9a5861c90413c470d870b3fc6c8a 398 Gene3D G3DSA:2.40.160.50 124 396 2.2E-10 T 12-10-2018 Vc3S01_A0213 f464b27b30e8077e024aa86d17515eac 184 Pfam PF01618 MotA/TolQ/ExbB proton channel family 64 177 1.4E-22 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Vc3S01_0580 1f1775afb0c9c3f4d68756796ae03844 161 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 134 7.6E-47 T 12-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Vc3S01_0580 1f1775afb0c9c3f4d68756796ae03844 161 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 134 3.0E-38 T 12-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Vc3S01_0580 1f1775afb0c9c3f4d68756796ae03844 161 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 12-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Vc3S01_0580 1f1775afb0c9c3f4d68756796ae03844 161 Gene3D G3DSA:3.30.70.560 1 159 3.1E-60 T 12-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Vc3S01_0580 1f1775afb0c9c3f4d68756796ae03844 161 SUPERFAMILY SSF55083 1 159 8.89E-55 T 12-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Vc3S01_2622 0e96eaa01104e3c63f5806c5ef06af9e 443 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 7 443 31.395 T 12-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 Vc3S01_2622 0e96eaa01104e3c63f5806c5ef06af9e 443 Pfam PF13742 OB-fold nucleic acid binding domain 10 103 5.9E-30 T 12-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 Vc3S01_2622 0e96eaa01104e3c63f5806c5ef06af9e 443 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 11 356 1.4E-135 T 12-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 Vc3S01_2622 0e96eaa01104e3c63f5806c5ef06af9e 443 Pfam PF02601 Exonuclease VII, large subunit 126 440 1.5E-103 T 12-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 Vc3S01_1701 b3f006d062a214c8dde1426185854f0c 272 Pfam PF04116 Fatty acid hydroxylase superfamily 93 229 1.4E-26 T 12-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 Vc3S01_1636 c1088a494b0086549f92d54e01d90a35 180 PIRSF PIRSF010252 1 178 1.7E-69 T 12-10-2018 IPR009809 Cell division protein ZapC Vc3S01_1636 c1088a494b0086549f92d54e01d90a35 180 Pfam PF07126 Cell-division protein ZapC 1 168 1.3E-64 T 12-10-2018 IPR009809 Cell division protein ZapC Vc3S01_1636 c1088a494b0086549f92d54e01d90a35 180 Hamap MF_00906 Cell division protein ZapC [zapC]. 1 177 35.855 T 12-10-2018 IPR009809 Cell division protein ZapC Vc3S01_1788 d5b858453f7b9360630bd706aaf74da0 317 PIRSF PIRSF028696 1 317 2.2E-84 T 12-10-2018 IPR016896 Protein of unknown function DUF2860 Vc3S01_1788 d5b858453f7b9360630bd706aaf74da0 317 Pfam PF11059 Protein of unknown function (DUF2860) 27 316 1.2E-89 T 12-10-2018 IPR016896 Protein of unknown function DUF2860 Vc3S01_1788 d5b858453f7b9360630bd706aaf74da0 317 SUPERFAMILY SSF56935 81 317 1.53E-6 T 12-10-2018 Vc3S01_A1210 5d0397d9b1dda513ddd4d4ec8d579019 1018 Pfam PF13558 Putative exonuclease SbcCD, C subunit 910 971 4.3E-12 T 12-10-2018 Vc3S01_A1210 5d0397d9b1dda513ddd4d4ec8d579019 1018 Gene3D G3DSA:3.40.50.300 744 1012 3.2E-26 T 12-10-2018 Vc3S01_A1210 5d0397d9b1dda513ddd4d4ec8d579019 1018 SUPERFAMILY SSF52540 1 1000 4.18E-36 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A1210 5d0397d9b1dda513ddd4d4ec8d579019 1018 Gene3D G3DSA:3.40.50.300 1 304 1.7E-42 T 12-10-2018 Vc3S01_A1210 5d0397d9b1dda513ddd4d4ec8d579019 1018 Pfam PF13476 AAA domain 5 269 1.6E-18 T 12-10-2018 IPR038729 Rad50/SbcC-type AAA domain Vc3S01_A0751 74806024fc6e2c1196eb7a12d7fe7406 185 SUPERFAMILY SSF56784 1 176 1.65E-39 T 12-10-2018 IPR036412 HAD-like superfamily Vc3S01_A0751 74806024fc6e2c1196eb7a12d7fe7406 185 Gene3D G3DSA:1.10.150.240 7 77 6.5E-39 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Vc3S01_A0751 74806024fc6e2c1196eb7a12d7fe7406 185 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 113 174 5.0E-13 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Vc3S01_A0751 74806024fc6e2c1196eb7a12d7fe7406 185 Pfam PF13419 Haloacid dehalogenase-like hydrolase 1 174 1.5E-24 T 12-10-2018 Vc3S01_A0751 74806024fc6e2c1196eb7a12d7fe7406 185 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 1 174 3.2E-52 T 12-10-2018 IPR010976 Beta-phosphoglucomutase hydrolase Vc3S01_A0751 74806024fc6e2c1196eb7a12d7fe7406 185 Gene3D G3DSA:3.40.50.1000 1 177 6.5E-39 T 12-10-2018 IPR023214 HAD superfamily Vc3S01_A0459 f9430217ef79c9dd878a1aef7d0672e5 273 Gene3D G3DSA:3.40.190.10 30 264 3.2E-82 T 12-10-2018 Vc3S01_A0459 f9430217ef79c9dd878a1aef7d0672e5 273 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 20 271 1.2E-75 T 12-10-2018 IPR011862 Phosphate binding protein GO:0042301 Vc3S01_A0459 f9430217ef79c9dd878a1aef7d0672e5 273 Pfam PF12849 PBP superfamily domain 23 259 1.0E-41 T 12-10-2018 IPR024370 PBP domain Vc3S01_A0459 f9430217ef79c9dd878a1aef7d0672e5 273 SUPERFAMILY SSF53850 16 272 5.65E-72 T 12-10-2018 Vc3S01_A0459 f9430217ef79c9dd878a1aef7d0672e5 273 Gene3D G3DSA:3.40.190.10 100 233 3.2E-82 T 12-10-2018 Vc3S01_A1579 4f1e717e53ce90c354daae5ac83775bb 435 SUPERFAMILY SSF53850 20 424 1.32E-72 T 12-10-2018 Vc3S01_A1579 4f1e717e53ce90c354daae5ac83775bb 435 Pfam PF13416 Bacterial extracellular solute-binding protein 42 365 5.2E-42 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein Vc3S01_A1579 4f1e717e53ce90c354daae5ac83775bb 435 Gene3D G3DSA:3.40.190.10 144 421 2.2E-133 T 12-10-2018 Vc3S01_A1579 4f1e717e53ce90c354daae5ac83775bb 435 Gene3D G3DSA:3.40.190.10 28 381 2.2E-133 T 12-10-2018 Vc3S01_A1579 4f1e717e53ce90c354daae5ac83775bb 435 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 139 156 - T 12-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 Vc3S01_3068 41109d417f99ed329cd30109358da4a5 144 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 144 32.614 T 12-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 Vc3S01_3068 41109d417f99ed329cd30109358da4a5 144 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 142 4.2E-51 T 12-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 Vc3S01_3068 41109d417f99ed329cd30109358da4a5 144 Gene3D G3DSA:3.50.80.10 1 144 9.0E-54 T 12-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily Vc3S01_3068 41109d417f99ed329cd30109358da4a5 144 SUPERFAMILY SSF69500 2 143 1.7E-53 T 12-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily Vc3S01_3068 41109d417f99ed329cd30109358da4a5 144 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 2 144 1.6E-63 T 12-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 Vc3S01_2350 f75a7a88d980ae0da1c1163188f8cf06 281 Gene3D G3DSA:1.10.530.10 120 279 4.7E-9 T 12-10-2018 Vc3S01_2350 f75a7a88d980ae0da1c1163188f8cf06 281 SUPERFAMILY SSF53955 115 222 6.61E-10 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily Vc3S01_2350 f75a7a88d980ae0da1c1163188f8cf06 281 Gene3D G3DSA:1.10.101.10 4 87 2.9E-5 T 12-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 Vc3S01_2350 f75a7a88d980ae0da1c1163188f8cf06 281 Pfam PF01464 Transglycosylase SLT domain 138 187 9.6E-5 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 Vc3S01_2350 f75a7a88d980ae0da1c1163188f8cf06 281 ProSitePatterns PS00018 EF-hand calcium-binding domain. 251 263 - T 12-10-2018 IPR018247 EF-Hand 1, calcium-binding site Vc3S01_A0801 8c75029da6144729e8174990314c8019 489 Pfam PF00563 EAL domain 247 478 4.0E-64 T 12-10-2018 IPR001633 EAL domain Vc3S01_A0801 8c75029da6144729e8174990314c8019 489 Gene3D G3DSA:3.20.20.450 241 488 3.5E-77 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_A0801 8c75029da6144729e8174990314c8019 489 Pfam PF12792 CSS motif domain associated with EAL 33 154 2.2E-7 T 12-10-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain Vc3S01_A0801 8c75029da6144729e8174990314c8019 489 SMART SM00052 241 483 2.9E-75 T 12-10-2018 IPR001633 EAL domain Vc3S01_A0801 8c75029da6144729e8174990314c8019 489 SUPERFAMILY SSF141868 247 485 1.24E-71 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_A1978 5fb7038242ff894399a7b8df8de62f27 485 Pfam PF02447 GntP family permease 5 446 1.0E-101 T 12-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 Vc3S01_A1074 63c8e042b6be85499643af67630ff02d 802 TIGRFAM TIGR03502 lipase_Pla1_cef: extracellular lipase, Pla-1/cef family 1 789 3.9E-255 T 12-10-2018 IPR020009 Extracellular lipase, Pla-1/cef family Vc3S01_A1074 63c8e042b6be85499643af67630ff02d 802 SUPERFAMILY SSF53474 441 602 1.45E-11 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_A1074 63c8e042b6be85499643af67630ff02d 802 Pfam PF12262 Bacterial virulence factor lipase N-terminal 1 271 1.5E-127 T 12-10-2018 IPR025920 Bacterial virulence factor lipase, N-terminal domain Vc3S01_A1074 63c8e042b6be85499643af67630ff02d 802 Gene3D G3DSA:3.40.50.1820 432 609 9.2E-23 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_2528 11472fbb857a546d6605b1290d35c13f 92 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 6 92 26.481 T 12-10-2018 IPR007454 Uncharacterised protein family UPF0250 Vc3S01_2528 11472fbb857a546d6605b1290d35c13f 92 Pfam PF04359 Protein of unknown function (DUF493) 12 92 2.3E-29 T 12-10-2018 IPR007454 Uncharacterised protein family UPF0250 Vc3S01_2528 11472fbb857a546d6605b1290d35c13f 92 Gene3D G3DSA:3.30.70.260 6 92 2.4E-33 T 12-10-2018 Vc3S01_2528 11472fbb857a546d6605b1290d35c13f 92 SUPERFAMILY SSF117991 7 92 2.62E-31 T 12-10-2018 IPR027471 YbeD-like domain superfamily Vc3S01_A1815 7aaf003306a40c7f80f9a1992f9a4206 556 Gene3D G3DSA:1.20.1600.10 59 493 3.4E-110 T 12-10-2018 Vc3S01_A1815 7aaf003306a40c7f80f9a1992f9a4206 556 SUPERFAMILY SSF56954 2 494 3.14E-94 T 12-10-2018 Vc3S01_A1815 7aaf003306a40c7f80f9a1992f9a4206 556 Pfam PF02321 Outer membrane efflux protein 311 490 1.1E-21 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Vc3S01_A1815 7aaf003306a40c7f80f9a1992f9a4206 556 Pfam PF02321 Outer membrane efflux protein 69 251 1.1E-26 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Vc3S01_A1815 7aaf003306a40c7f80f9a1992f9a4206 556 Gene3D G3DSA:2.20.200.10 106 381 3.4E-110 T 12-10-2018 Vc3S01_2629 d8a2ede35a9830c8599a6347397dd548 422 Gene3D G3DSA:3.40.50.800 326 421 5.6E-25 T 12-10-2018 IPR036621 Anticodon-binding domain superfamily Vc3S01_2629 d8a2ede35a9830c8599a6347397dd548 422 Pfam PF03129 Anticodon binding domain 329 420 3.1E-11 T 12-10-2018 IPR004154 Anticodon-binding Vc3S01_2629 d8a2ede35a9830c8599a6347397dd548 422 Pfam PF13393 Histidyl-tRNA synthetase 10 312 2.8E-46 T 12-10-2018 Vc3S01_2629 d8a2ede35a9830c8599a6347397dd548 422 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 420 33.776 T 12-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 Vc3S01_2629 d8a2ede35a9830c8599a6347397dd548 422 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 409 5.5E-158 T 12-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 Vc3S01_2629 d8a2ede35a9830c8599a6347397dd548 422 PIRSF PIRSF001549 2 422 1.4E-124 T 12-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Vc3S01_2629 d8a2ede35a9830c8599a6347397dd548 422 Gene3D G3DSA:3.30.930.10 2 323 1.9E-119 T 12-10-2018 Vc3S01_2629 d8a2ede35a9830c8599a6347397dd548 422 SUPERFAMILY SSF52954 327 421 9.49E-27 T 12-10-2018 Vc3S01_2629 d8a2ede35a9830c8599a6347397dd548 422 SUPERFAMILY SSF55681 4 320 1.65E-103 T 12-10-2018 Vc3S01_0105 edccd19ca16ec6d359a152c091efba6c 204 PIRSF PIRSF006324 1 204 1.1E-54 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Vc3S01_0105 edccd19ca16ec6d359a152c091efba6c 204 Pfam PF01810 LysE type translocator 15 202 3.7E-33 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Vc3S01_0578 817788013e8b69dfecb438369479c961 300 Pfam PF02569 Pantoate-beta-alanine ligase 3 278 9.2E-100 T 12-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 Vc3S01_0578 817788013e8b69dfecb438369479c961 300 SUPERFAMILY SSF52374 1 280 1.06E-105 T 12-10-2018 Vc3S01_0578 817788013e8b69dfecb438369479c961 300 Gene3D G3DSA:3.40.50.620 1 179 4.0E-79 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Vc3S01_0578 817788013e8b69dfecb438369479c961 300 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 24 62 2.0E-8 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Vc3S01_0578 817788013e8b69dfecb438369479c961 300 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 281 1.2E-102 T 12-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 Vc3S01_0578 817788013e8b69dfecb438369479c961 300 Gene3D G3DSA:3.30.1300.10 181 283 1.3E-26 T 12-10-2018 Vc3S01_0578 817788013e8b69dfecb438369479c961 300 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 39.802 T 12-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 Vc3S01_A0861 1167f0b217cea2802843814090768913 469 Gene3D G3DSA:1.20.210.10 2 469 1.0E-179 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A0861 1167f0b217cea2802843814090768913 469 SUPERFAMILY SSF81442 7 465 1.57E-105 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A0861 1167f0b217cea2802843814090768913 469 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 202 257 - T 12-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A0861 1167f0b217cea2802843814090768913 469 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 7 460 2.1E-178 T 12-10-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 Vc3S01_A0861 1167f0b217cea2802843814090768913 469 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 12 441 1.1E-97 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_1840 84fa834b1d5f2d679778d4308da9b6ae 599 TIGRFAM TIGR02290 M3_fam_3: oligoendopeptidase, pepF/M3 family 5 593 2.2E-203 T 12-10-2018 IPR011977 Peptidase M3B, oligoendopeptidase-related clade 3 Vc3S01_1840 84fa834b1d5f2d679778d4308da9b6ae 599 Pfam PF08439 Oligopeptidase F 106 174 3.2E-11 T 12-10-2018 IPR013647 Oligopeptidase F, N-terminal domain Vc3S01_1840 84fa834b1d5f2d679778d4308da9b6ae 599 SUPERFAMILY SSF55486 4 576 5.2E-94 T 12-10-2018 Vc3S01_1840 84fa834b1d5f2d679778d4308da9b6ae 599 Gene3D G3DSA:1.10.1370.20 219 598 1.4E-109 T 12-10-2018 Vc3S01_1840 84fa834b1d5f2d679778d4308da9b6ae 599 Pfam PF01432 Peptidase family M3 335 579 2.6E-23 T 12-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 Vc3S01_1840 84fa834b1d5f2d679778d4308da9b6ae 599 Gene3D G3DSA:1.20.140.70 21 169 7.0E-11 T 12-10-2018 Vc3S01_1052 71410dfe8b9ef7eb5f7657d4e5df55e2 170 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 72 85 - T 12-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 Vc3S01_1052 71410dfe8b9ef7eb5f7657d4e5df55e2 170 SMART SM00852 14 158 4.7E-27 T 12-10-2018 IPR001453 MoaB/Mog domain Vc3S01_1052 71410dfe8b9ef7eb5f7657d4e5df55e2 170 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 7 168 1.4E-84 T 12-10-2018 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 Vc3S01_1052 71410dfe8b9ef7eb5f7657d4e5df55e2 170 Pfam PF00994 Probable molybdopterin binding domain 14 156 1.6E-33 T 12-10-2018 IPR001453 MoaB/Mog domain Vc3S01_1052 71410dfe8b9ef7eb5f7657d4e5df55e2 170 Gene3D G3DSA:3.40.980.10 2 170 2.6E-51 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily Vc3S01_1052 71410dfe8b9ef7eb5f7657d4e5df55e2 170 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 12 152 4.1E-36 T 12-10-2018 IPR001453 MoaB/Mog domain Vc3S01_1052 71410dfe8b9ef7eb5f7657d4e5df55e2 170 PIRSF PIRSF006443 1 166 5.5E-66 T 12-10-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 Vc3S01_1052 71410dfe8b9ef7eb5f7657d4e5df55e2 170 SUPERFAMILY SSF53218 7 168 6.15E-47 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily Vc3S01_A1117 eaaed7e1703221f5f656253aa3136570 464 PIRSF PIRSF000204 1 464 1.3E-235 T 12-10-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 Vc3S01_A1117 eaaed7e1703221f5f656253aa3136570 464 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 462 6.6E-203 T 12-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 Vc3S01_A1117 eaaed7e1703221f5f656253aa3136570 464 SUPERFAMILY SSF52467 291 464 8.18E-79 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Vc3S01_A1117 eaaed7e1703221f5f656253aa3136570 464 Gene3D G3DSA:3.40.50.1220 288 464 5.1E-89 T 12-10-2018 Vc3S01_2311 21bbb5f4773ce4ee4493989416d66bbb 264 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 13 260 34.602 T 12-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 Vc3S01_2311 21bbb5f4773ce4ee4493989416d66bbb 264 SUPERFAMILY SSF53474 16 261 6.83E-42 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_2311 21bbb5f4773ce4ee4493989416d66bbb 264 Gene3D G3DSA:3.40.50.1820 10 261 3.4E-64 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_2311 21bbb5f4773ce4ee4493989416d66bbb 264 Pfam PF12697 Alpha/beta hydrolase family 21 252 9.0E-17 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Vc3S01_2311 21bbb5f4773ce4ee4493989416d66bbb 264 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 19 260 4.9E-83 T 12-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 Vc3S01_A1904 5ab8fd88351fb620f1e312bc1a4e00aa 573 Pfam PF00990 Diguanylate cyclase, GGDEF domain 416 566 1.0E-30 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A1904 5ab8fd88351fb620f1e312bc1a4e00aa 573 SUPERFAMILY SSF55073 420 569 6.43E-33 T 12-10-2018 IPR029787 Nucleotide cyclase Vc3S01_A1904 5ab8fd88351fb620f1e312bc1a4e00aa 573 SMART SM00267 407 570 1.0E-33 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A1904 5ab8fd88351fb620f1e312bc1a4e00aa 573 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 416 568 2.4E-29 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A1904 5ab8fd88351fb620f1e312bc1a4e00aa 573 Gene3D G3DSA:3.30.70.270 411 572 2.6E-39 T 12-10-2018 Vc3S01_A1904 5ab8fd88351fb620f1e312bc1a4e00aa 573 Gene3D G3DSA:3.30.450.20 143 248 7.4E-7 T 12-10-2018 Vc3S01_A1919 d6068a543e3d73c2d5bc9ba9d3498d4c 394 Pfam PF07690 Major Facilitator Superfamily 15 270 6.8E-40 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Vc3S01_A1919 d6068a543e3d73c2d5bc9ba9d3498d4c 394 Gene3D G3DSA:1.20.1720.10 9 384 1.5E-81 T 12-10-2018 Vc3S01_A1919 d6068a543e3d73c2d5bc9ba9d3498d4c 394 SUPERFAMILY SSF103473 3 381 4.58E-55 T 12-10-2018 IPR036259 MFS transporter superfamily Vc3S01_0647 31f806893268e477a0d8238200ee77cf 529 Gene3D G3DSA:3.40.50.300 72 379 1.3E-113 T 12-10-2018 Vc3S01_0647 31f806893268e477a0d8238200ee77cf 529 PRINTS PR00315 GTP-binding elongation factor signature 65 73 3.3E-10 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Vc3S01_0647 31f806893268e477a0d8238200ee77cf 529 PRINTS PR00315 GTP-binding elongation factor signature 15 28 3.3E-10 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Vc3S01_0647 31f806893268e477a0d8238200ee77cf 529 PRINTS PR00315 GTP-binding elongation factor signature 85 95 3.3E-10 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Vc3S01_0647 31f806893268e477a0d8238200ee77cf 529 PRINTS PR00315 GTP-binding elongation factor signature 137 146 3.3E-10 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Vc3S01_0647 31f806893268e477a0d8238200ee77cf 529 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 154 4.6E-19 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Vc3S01_0647 31f806893268e477a0d8238200ee77cf 529 Pfam PF16658 Class II release factor RF3, C-terminal domain 387 514 2.0E-46 T 12-10-2018 IPR032090 Peptide chain release factor 3, C-terminal Vc3S01_0647 31f806893268e477a0d8238200ee77cf 529 Pfam PF03144 Elongation factor Tu domain 2 314 380 1.2E-7 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Vc3S01_0647 31f806893268e477a0d8238200ee77cf 529 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 4 527 51.857 T 12-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 Vc3S01_0647 31f806893268e477a0d8238200ee77cf 529 SUPERFAMILY SSF50447 262 393 5.3E-27 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Vc3S01_0647 31f806893268e477a0d8238200ee77cf 529 Gene3D G3DSA:3.30.70.3280 390 529 1.5E-52 T 12-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily Vc3S01_0647 31f806893268e477a0d8238200ee77cf 529 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 6 529 3.1E-300 T 12-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 Vc3S01_0647 31f806893268e477a0d8238200ee77cf 529 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site Vc3S01_0647 31f806893268e477a0d8238200ee77cf 529 Gene3D G3DSA:3.40.50.300 110 275 1.3E-113 T 12-10-2018 Vc3S01_0647 31f806893268e477a0d8238200ee77cf 529 SUPERFAMILY SSF52540 10 277 6.04E-85 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0647 31f806893268e477a0d8238200ee77cf 529 Pfam PF00009 Elongation factor Tu GTP binding domain 13 277 5.0E-46 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Vc3S01_0647 31f806893268e477a0d8238200ee77cf 529 SUPERFAMILY SSF54980 393 468 2.81E-17 T 12-10-2018 IPR035647 EF-G domain III/V-like Vc3S01_1112 c3a117589f9506667fdfc31e0c7731b3 549 SUPERFAMILY SSF53474 23 509 6.68E-84 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_1112 c3a117589f9506667fdfc31e0c7731b3 549 Pfam PF00135 Carboxylesterase family 25 510 1.4E-83 T 12-10-2018 IPR002018 Carboxylesterase, type B Vc3S01_1112 c3a117589f9506667fdfc31e0c7731b3 549 ProSitePatterns PS00122 Carboxylesterases type-B serine active site. 202 217 - T 12-10-2018 IPR019826 Carboxylesterase type B, active site Vc3S01_1112 c3a117589f9506667fdfc31e0c7731b3 549 Gene3D G3DSA:3.40.50.1820 19 547 5.1E-104 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_2570 e7c5006f70da7fe4a0aea605e82cf8dd 411 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 317 338 - T 12-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Vc3S01_2570 e7c5006f70da7fe4a0aea605e82cf8dd 411 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 5 400 6.6E-165 T 12-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Vc3S01_2570 e7c5006f70da7fe4a0aea605e82cf8dd 411 SUPERFAMILY SSF53720 2 403 7.59E-109 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Vc3S01_2570 e7c5006f70da7fe4a0aea605e82cf8dd 411 Gene3D G3DSA:3.40.605.10 10 403 9.6E-150 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Vc3S01_2570 e7c5006f70da7fe4a0aea605e82cf8dd 411 PIRSF PIRSF000151 1 411 2.1E-162 T 12-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 Vc3S01_2570 e7c5006f70da7fe4a0aea605e82cf8dd 411 Pfam PF00171 Aldehyde dehydrogenase family 3 275 2.4E-15 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Vc3S01_2570 e7c5006f70da7fe4a0aea605e82cf8dd 411 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 1 410 37.799 T 12-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Vc3S01_2570 e7c5006f70da7fe4a0aea605e82cf8dd 411 Gene3D G3DSA:3.40.309.10 218 368 9.6E-150 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Vc3S01_A1684 282c21f0e43a7b1b2a90081d1d4f756a 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 158 172 3.3E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_A1684 282c21f0e43a7b1b2a90081d1d4f756a 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 188 3.3E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_A1684 282c21f0e43a7b1b2a90081d1d4f756a 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 188 200 3.3E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_A1684 282c21f0e43a7b1b2a90081d1d4f756a 217 SUPERFAMILY SSF46894 149 214 2.89E-20 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Vc3S01_A1684 282c21f0e43a7b1b2a90081d1d4f756a 217 Gene3D G3DSA:3.40.50.2300 8 142 1.8E-25 T 12-10-2018 Vc3S01_A1684 282c21f0e43a7b1b2a90081d1d4f756a 217 Gene3D G3DSA:1.10.10.10 155 216 1.1E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A1684 282c21f0e43a7b1b2a90081d1d4f756a 217 SMART SM00421 155 212 1.4E-23 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_A1684 282c21f0e43a7b1b2a90081d1d4f756a 217 Pfam PF00196 Bacterial regulatory proteins, luxR family 158 212 3.1E-20 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_A1684 282c21f0e43a7b1b2a90081d1d4f756a 217 ProSitePatterns PS00622 LuxR-type HTH domain signature. 172 199 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_A0636 7a071d0b5fe5497df7dc902e3a679892 114 Pfam PF09339 IclR helix-turn-helix domain 20 65 9.8E-9 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Vc3S01_A0636 7a071d0b5fe5497df7dc902e3a679892 114 Gene3D G3DSA:1.10.10.10 14 90 5.2E-10 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A0636 7a071d0b5fe5497df7dc902e3a679892 114 SUPERFAMILY SSF46785 19 88 2.26E-7 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A1031 f61fb10aaf5eebce3f254ada19c44278 1019 SUPERFAMILY SSF82714 712 788 6.28E-10 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Vc3S01_A1031 f61fb10aaf5eebce3f254ada19c44278 1019 Gene3D G3DSA:1.20.1640.10 10 508 6.0E-265 T 12-10-2018 Vc3S01_A1031 f61fb10aaf5eebce3f254ada19c44278 1019 SUPERFAMILY SSF82693 40 135 1.46E-19 T 12-10-2018 Vc3S01_A1031 f61fb10aaf5eebce3f254ada19c44278 1019 SUPERFAMILY SSF82714 185 266 1.57E-11 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Vc3S01_A1031 f61fb10aaf5eebce3f254ada19c44278 1019 Gene3D G3DSA:3.30.2090.10 706 796 6.0E-265 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Vc3S01_A1031 f61fb10aaf5eebce3f254ada19c44278 1019 SUPERFAMILY SSF82866 292 491 3.92E-38 T 12-10-2018 Vc3S01_A1031 f61fb10aaf5eebce3f254ada19c44278 1019 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 1.8E-24 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_A1031 f61fb10aaf5eebce3f254ada19c44278 1019 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 1.8E-24 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_A1031 f61fb10aaf5eebce3f254ada19c44278 1019 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 1.8E-24 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_A1031 f61fb10aaf5eebce3f254ada19c44278 1019 PRINTS PR00702 Acriflavin resistance protein family signature 332 355 1.8E-24 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_A1031 f61fb10aaf5eebce3f254ada19c44278 1019 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.8E-24 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_A1031 f61fb10aaf5eebce3f254ada19c44278 1019 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.8E-24 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_A1031 f61fb10aaf5eebce3f254ada19c44278 1019 Gene3D G3DSA:1.20.1640.10 509 1008 6.0E-265 T 12-10-2018 Vc3S01_A1031 f61fb10aaf5eebce3f254ada19c44278 1019 Gene3D G3DSA:3.30.70.1430 556 654 6.0E-265 T 12-10-2018 Vc3S01_A1031 f61fb10aaf5eebce3f254ada19c44278 1019 Gene3D G3DSA:3.30.2090.10 179 270 6.0E-265 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Vc3S01_A1031 f61fb10aaf5eebce3f254ada19c44278 1019 Gene3D G3DSA:3.30.70.1320 135 328 6.0E-265 T 12-10-2018 Vc3S01_A1031 f61fb10aaf5eebce3f254ada19c44278 1019 SUPERFAMILY SSF82693 136 326 4.19E-22 T 12-10-2018 Vc3S01_A1031 f61fb10aaf5eebce3f254ada19c44278 1019 Gene3D G3DSA:3.30.70.1430 40 804 6.0E-265 T 12-10-2018 Vc3S01_A1031 f61fb10aaf5eebce3f254ada19c44278 1019 Pfam PF00873 AcrB/AcrD/AcrF family 3 1011 5.1E-174 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Vc3S01_A1031 f61fb10aaf5eebce3f254ada19c44278 1019 SUPERFAMILY SSF82866 793 1015 1.09E-44 T 12-10-2018 Vc3S01_A1031 f61fb10aaf5eebce3f254ada19c44278 1019 Gene3D G3DSA:3.30.70.1440 655 856 6.0E-265 T 12-10-2018 Vc3S01_A0578 7dca25a6c90dee00336e9a4a09018fdc 97 SUPERFAMILY SSF46785 1 93 3.3E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A0578 7dca25a6c90dee00336e9a4a09018fdc 97 Pfam PF12840 Helix-turn-helix domain 8 69 2.8E-11 T 12-10-2018 Vc3S01_A0578 7dca25a6c90dee00336e9a4a09018fdc 97 SMART SM00418 8 88 5.8E-6 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Vc3S01_A0578 7dca25a6c90dee00336e9a4a09018fdc 97 Gene3D G3DSA:1.10.10.10 1 97 4.1E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A0578 7dca25a6c90dee00336e9a4a09018fdc 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 9.5E-7 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Vc3S01_A0578 7dca25a6c90dee00336e9a4a09018fdc 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 60 9.5E-7 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Vc3S01_A0578 7dca25a6c90dee00336e9a4a09018fdc 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 9.5E-7 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Vc3S01_A0126 5f78403d0e04a21ab57410f834b7587e 271 Gene3D G3DSA:2.40.128.150 86 183 5.9E-70 T 12-10-2018 Vc3S01_A0126 5f78403d0e04a21ab57410f834b7587e 271 Pfam PF00797 N-acetyltransferase 23 258 1.1E-65 T 12-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 Vc3S01_A0126 5f78403d0e04a21ab57410f834b7587e 271 PRINTS PR01543 Arylamine N-acetyltransferase signature 100 125 6.1E-9 T 12-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 Vc3S01_A0126 5f78403d0e04a21ab57410f834b7587e 271 PRINTS PR01543 Arylamine N-acetyltransferase signature 22 45 6.1E-9 T 12-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 Vc3S01_A0126 5f78403d0e04a21ab57410f834b7587e 271 PRINTS PR01543 Arylamine N-acetyltransferase signature 46 69 6.1E-9 T 12-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 Vc3S01_A0126 5f78403d0e04a21ab57410f834b7587e 271 Gene3D G3DSA:3.30.2140.10 6 253 5.9E-70 T 12-10-2018 Vc3S01_A0126 5f78403d0e04a21ab57410f834b7587e 271 SUPERFAMILY SSF54001 2 258 9.42E-74 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Vc3S01_1091 d2dcf730968f4d9fc1588b520b6a20bb 341 Gene3D G3DSA:3.40.718.10 2 340 1.3E-121 T 12-10-2018 Vc3S01_1091 d2dcf730968f4d9fc1588b520b6a20bb 341 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 6 335 1.4E-106 T 12-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 Vc3S01_1091 d2dcf730968f4d9fc1588b520b6a20bb 341 SUPERFAMILY SSF53659 4 336 8.22E-104 T 12-10-2018 Vc3S01_1091 d2dcf730968f4d9fc1588b520b6a20bb 341 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 340 139.043 T 12-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 Vc3S01_1091 d2dcf730968f4d9fc1588b520b6a20bb 341 PIRSF PIRSF002465 2 339 1.1E-124 T 12-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 Vc3S01_1091 d2dcf730968f4d9fc1588b520b6a20bb 341 Pfam PF02504 Fatty acid synthesis protein 5 327 1.5E-101 T 12-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 Vc3S01_A1583 437e767d10bde48457f18b805ee2b6ff 269 Gene3D G3DSA:3.40.50.1000 13 144 2.1E-8 T 12-10-2018 IPR023214 HAD superfamily Vc3S01_A1583 437e767d10bde48457f18b805ee2b6ff 269 Gene3D G3DSA:3.40.50.1000 156 269 1.1E-6 T 12-10-2018 IPR023214 HAD superfamily Vc3S01_A1583 437e767d10bde48457f18b805ee2b6ff 269 Pfam PF08282 haloacid dehalogenase-like hydrolase 20 95 2.7E-5 T 12-10-2018 Vc3S01_A1583 437e767d10bde48457f18b805ee2b6ff 269 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 19 229 7.1E-14 T 12-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 Vc3S01_A1583 437e767d10bde48457f18b805ee2b6ff 269 SUPERFAMILY SSF56784 13 258 1.44E-23 T 12-10-2018 IPR036412 HAD-like superfamily Vc3S01_1823 2ca29ab0467bf1d11efa6eccae85201f 923 Pfam PF16967 E-set like domain 273 336 1.8E-13 T 12-10-2018 IPR032636 Pilus assembly protein, E-set like domain Vc3S01_1820 71132593d4c4af6c1e3ad88690c750a6 251 Pfam PF01476 LysM domain 200 241 2.5E-5 T 12-10-2018 IPR018392 LysM domain Vc3S01_1820 71132593d4c4af6c1e3ad88690c750a6 251 Gene3D G3DSA:3.10.350.10 191 251 2.5E-7 T 12-10-2018 IPR036779 LysM domain superfamily Vc3S01_1820 71132593d4c4af6c1e3ad88690c750a6 251 Gene3D G3DSA:2.40.160.20 24 164 2.2E-11 T 12-10-2018 Vc3S01_1820 71132593d4c4af6c1e3ad88690c750a6 251 SUPERFAMILY SSF56925 26 160 3.92E-15 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel Vc3S01_1820 71132593d4c4af6c1e3ad88690c750a6 251 Pfam PF13505 Outer membrane protein beta-barrel domain 7 160 2.2E-12 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel Vc3S01_1820 71132593d4c4af6c1e3ad88690c750a6 251 SUPERFAMILY SSF54106 199 244 5.75E-5 T 12-10-2018 Vc3S01_A1085 64e323cbfb31369baadc226b71d9253c 206 SUPERFAMILY SSF46565 108 205 3.93E-14 T 12-10-2018 IPR036869 Chaperone J-domain superfamily Vc3S01_A1085 64e323cbfb31369baadc226b71d9253c 206 SMART SM00271 153 206 1.3E-8 T 12-10-2018 IPR001623 DnaJ domain Vc3S01_A1085 64e323cbfb31369baadc226b71d9253c 206 Pfam PF00226 DnaJ domain 159 205 3.5E-11 T 12-10-2018 IPR001623 DnaJ domain Vc3S01_A1085 64e323cbfb31369baadc226b71d9253c 206 Pfam PF12339 DNA-J related protein 17 138 2.4E-42 T 12-10-2018 IPR021059 DnaJ-related protein, N-terminal Vc3S01_A1085 64e323cbfb31369baadc226b71d9253c 206 Gene3D G3DSA:1.10.287.110 147 206 1.0E-12 T 12-10-2018 IPR036869 Chaperone J-domain superfamily Vc3S01_3028 b1eb79b63a780f07eda569ad38fe97ac 453 PIRSF PIRSF037714 2 453 6.1E-169 T 12-10-2018 IPR017270 Putative MotA/TolQ/ExbB family protein Vc3S01_3028 b1eb79b63a780f07eda569ad38fe97ac 453 Pfam PF01618 MotA/TolQ/ExbB proton channel family 317 434 2.4E-28 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Vc3S01_A0361 c594d586d8ed134b216318f76ca836db 375 Gene3D G3DSA:3.40.1690.10 217 358 6.3E-52 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal Vc3S01_A0361 c594d586d8ed134b216318f76ca836db 375 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 347 6.3E-118 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Vc3S01_A0361 c594d586d8ed134b216318f76ca836db 375 SUPERFAMILY SSF160544 252 355 1.28E-35 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal Vc3S01_A0361 c594d586d8ed134b216318f76ca836db 375 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 6.8E-37 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Vc3S01_A0361 c594d586d8ed134b216318f76ca836db 375 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 6.8E-37 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Vc3S01_A0361 c594d586d8ed134b216318f76ca836db 375 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 6.8E-37 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Vc3S01_A0361 c594d586d8ed134b216318f76ca836db 375 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 6.8E-37 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Vc3S01_A0361 c594d586d8ed134b216318f76ca836db 375 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 6.8E-37 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Vc3S01_A0361 c594d586d8ed134b216318f76ca836db 375 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 7 352 6.3E-118 T 12-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 Vc3S01_A0720 56e457c8132c01acac5a48a5ddb6dd12 308 SUPERFAMILY SSF103481 39 139 1.2E-9 T 12-10-2018 Vc3S01_A0720 56e457c8132c01acac5a48a5ddb6dd12 308 Pfam PF00892 EamA-like transporter family 3 136 6.5E-8 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Vc3S01_A0720 56e457c8132c01acac5a48a5ddb6dd12 308 Pfam PF00892 EamA-like transporter family 150 289 1.7E-12 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Vc3S01_A0720 56e457c8132c01acac5a48a5ddb6dd12 308 SUPERFAMILY SSF103481 207 289 2.22E-11 T 12-10-2018 Vc3S01_2281 a6dff5350fd5fc046fa7ad401b59874c 252 SUPERFAMILY SSF53167 4 251 3.93E-72 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 Vc3S01_2281 a6dff5350fd5fc046fa7ad401b59874c 252 Gene3D G3DSA:3.40.50.1580 1 252 5.5E-81 T 12-10-2018 Vc3S01_2281 a6dff5350fd5fc046fa7ad401b59874c 252 TIGRFAM TIGR01718 Uridine-psphlse: uridine phosphorylase 5 251 7.6E-111 T 12-10-2018 IPR010058 Uridine phosphorylase GO:0004850|GO:0005737|GO:0009166 KEGG: 00240+2.4.2.3|KEGG: 00983+2.4.2.3|MetaCyc: PWY-5532 Vc3S01_2281 a6dff5350fd5fc046fa7ad401b59874c 252 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 65 80 - T 12-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 Vc3S01_2281 a6dff5350fd5fc046fa7ad401b59874c 252 Pfam PF01048 Phosphorylase superfamily 20 244 2.4E-40 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 Vc3S01_1521 ab02dcbb1e8a514a25c61b415a683373 334 PIRSF PIRSF006470 1 331 9.1E-89 T 12-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 Vc3S01_1521 ab02dcbb1e8a514a25c61b415a683373 334 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 40 311 3.8E-78 T 12-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 Vc3S01_1521 ab02dcbb1e8a514a25c61b415a683373 334 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 39 285 3.2E-66 T 12-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 Vc3S01_1521 ab02dcbb1e8a514a25c61b415a683373 334 Gene3D G3DSA:3.40.190.170 25 334 3.8E-98 T 12-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily Vc3S01_0886 ac788481bffe7fcafe6c867bb84a7660 184 Gene3D G3DSA:3.40.30.10 20 184 1.0E-45 T 12-10-2018 Vc3S01_0886 ac788481bffe7fcafe6c867bb84a7660 184 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 6 177 7.8E-71 T 12-10-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 Vc3S01_0886 ac788481bffe7fcafe6c867bb84a7660 184 SUPERFAMILY SSF52833 46 177 1.17E-38 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Vc3S01_0886 ac788481bffe7fcafe6c867bb84a7660 184 Pfam PF08534 Redoxin 41 164 1.9E-27 T 12-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 Vc3S01_0886 ac788481bffe7fcafe6c867bb84a7660 184 ProSitePatterns PS00194 Thioredoxin family active site. 71 89 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Vc3S01_3148 065c5ec6d2bf055cbf463cfc17ddf5eb 318 SUPERFAMILY SSF161098 99 300 4.45E-25 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_3148 065c5ec6d2bf055cbf463cfc17ddf5eb 318 Gene3D G3DSA:1.10.3720.10 92 312 5.9E-25 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_3148 065c5ec6d2bf055cbf463cfc17ddf5eb 318 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 122 315 4.2E-29 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Vc3S01_3148 065c5ec6d2bf055cbf463cfc17ddf5eb 318 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 24 75 2.6E-8 T 12-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Vc3S01_1102 d1997541135d75eac051b23824eabf69 476 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 412 429 - T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 Vc3S01_1102 d1997541135d75eac051b23824eabf69 476 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 473 1.0E-196 T 12-10-2018 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0016021|GO:1904659 Vc3S01_1102 d1997541135d75eac051b23824eabf69 476 Gene3D G3DSA:3.30.1360.60 394 475 8.8E-29 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 Vc3S01_1102 d1997541135d75eac051b23824eabf69 476 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 375 458 6.4E-21 T 12-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 Vc3S01_1102 d1997541135d75eac051b23824eabf69 476 Pfam PF00367 phosphotransferase system, EIIB 402 434 7.3E-12 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 Vc3S01_1102 d1997541135d75eac051b23824eabf69 476 SUPERFAMILY SSF55604 399 472 9.68E-20 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 Vc3S01_1102 d1997541135d75eac051b23824eabf69 476 Pfam PF02378 Phosphotransferase system, EIIC 13 318 8.0E-75 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 Vc3S01_1477 54841caeec88d1592771340339afeba0 231 PIRSF PIRSF006324 20 230 1.9E-56 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Vc3S01_1477 54841caeec88d1592771340339afeba0 231 Pfam PF01810 LysE type translocator 35 228 1.2E-31 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Vc3S01_A0380 35284c8c9ed7eec8dd1bfad34e7c66b8 246 Gene3D G3DSA:2.60.40.10 21 146 1.1E-33 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_A0380 35284c8c9ed7eec8dd1bfad34e7c66b8 246 Gene3D G3DSA:2.60.40.10 153 245 9.5E-8 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_A0380 35284c8c9ed7eec8dd1bfad34e7c66b8 246 SUPERFAMILY SSF49354 16 144 1.19E-32 T 12-10-2018 IPR008962 PapD-like superfamily Vc3S01_A0380 35284c8c9ed7eec8dd1bfad34e7c66b8 246 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 22 144 5.5E-34 T 12-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 Vc3S01_A0380 35284c8c9ed7eec8dd1bfad34e7c66b8 246 SUPERFAMILY SSF49584 163 242 3.53E-7 T 12-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily Vc3S01_A0380 35284c8c9ed7eec8dd1bfad34e7c66b8 246 PRINTS PR00969 Pili chaperone signature 70 91 1.9E-24 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 Vc3S01_A0380 35284c8c9ed7eec8dd1bfad34e7c66b8 246 PRINTS PR00969 Pili chaperone signature 168 183 1.9E-24 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 Vc3S01_A0380 35284c8c9ed7eec8dd1bfad34e7c66b8 246 PRINTS PR00969 Pili chaperone signature 22 31 1.9E-24 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 Vc3S01_A0380 35284c8c9ed7eec8dd1bfad34e7c66b8 246 PRINTS PR00969 Pili chaperone signature 99 116 1.9E-24 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 Vc3S01_A0380 35284c8c9ed7eec8dd1bfad34e7c66b8 246 PRINTS PR00969 Pili chaperone signature 128 143 1.9E-24 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 Vc3S01_A0380 35284c8c9ed7eec8dd1bfad34e7c66b8 246 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 173 236 1.1E-7 T 12-10-2018 IPR016148 Pili assembly chaperone, C-terminal Vc3S01_2365 1328bd2f56bb71d3df2dded4ff8b7237 399 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 1 395 6.6E-135 T 12-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 Vc3S01_2365 1328bd2f56bb71d3df2dded4ff8b7237 399 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 5 78 1.0E-25 T 12-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 Vc3S01_2365 1328bd2f56bb71d3df2dded4ff8b7237 399 Pfam PF07670 Nucleoside recognition 87 182 5.7E-7 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 Vc3S01_2365 1328bd2f56bb71d3df2dded4ff8b7237 399 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 189 396 1.3E-70 T 12-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 Vc3S01_A0110 7a235443ea12c6759e515f97024d0dc2 334 Gene3D G3DSA:3.40.50.2300 62 304 4.8E-71 T 12-10-2018 Vc3S01_A0110 7a235443ea12c6759e515f97024d0dc2 334 Gene3D G3DSA:1.10.260.40 2 59 1.2E-21 T 12-10-2018 Vc3S01_A0110 7a235443ea12c6759e515f97024d0dc2 334 SUPERFAMILY SSF47413 2 60 9.85E-18 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Vc3S01_A0110 7a235443ea12c6759e515f97024d0dc2 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 6.1E-17 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Vc3S01_A0110 7a235443ea12c6759e515f97024d0dc2 334 Pfam PF13377 Periplasmic binding protein-like domain 169 331 4.4E-36 T 12-10-2018 Vc3S01_A0110 7a235443ea12c6759e515f97024d0dc2 334 Gene3D G3DSA:3.40.50.2300 159 292 4.8E-71 T 12-10-2018 Vc3S01_A0110 7a235443ea12c6759e515f97024d0dc2 334 SMART SM00354 1 71 9.1E-26 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Vc3S01_A0110 7a235443ea12c6759e515f97024d0dc2 334 SUPERFAMILY SSF53822 61 332 3.73E-76 T 12-10-2018 IPR028082 Periplasmic binding protein-like I Vc3S01_1932 f739170c4f8951683caa822cbe956a4b 267 SUPERFAMILY SSF141868 16 254 5.89E-42 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_1932 f739170c4f8951683caa822cbe956a4b 267 Gene3D G3DSA:3.20.20.450 11 250 1.5E-41 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_1932 f739170c4f8951683caa822cbe956a4b 267 Pfam PF00563 EAL domain 15 242 2.1E-35 T 12-10-2018 IPR001633 EAL domain Vc3S01_1932 f739170c4f8951683caa822cbe956a4b 267 SMART SM00052 2 247 2.3E-11 T 12-10-2018 IPR001633 EAL domain Vc3S01_2390 746195e87587f4ae26ee2d985bffca7b 1141 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 1087 1128 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Vc3S01_2390 746195e87587f4ae26ee2d985bffca7b 1141 Pfam PF12833 Helix-turn-helix domain 1057 1131 1.1E-20 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_2390 746195e87587f4ae26ee2d985bffca7b 1141 Gene3D G3DSA:1.10.10.60 1029 1140 6.1E-25 T 12-10-2018 Vc3S01_2390 746195e87587f4ae26ee2d985bffca7b 1141 Gene3D G3DSA:3.30.565.10 865 1004 5.5E-6 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_2390 746195e87587f4ae26ee2d985bffca7b 1141 SMART SM00342 1050 1132 8.9E-25 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_2390 746195e87587f4ae26ee2d985bffca7b 1141 SUPERFAMILY SSF63829 264 450 2.35E-14 T 12-10-2018 Vc3S01_2390 746195e87587f4ae26ee2d985bffca7b 1141 Gene3D G3DSA:2.130.10.10 256 473 5.9E-21 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Vc3S01_2390 746195e87587f4ae26ee2d985bffca7b 1141 SUPERFAMILY SSF46689 1086 1131 4.93E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_2390 746195e87587f4ae26ee2d985bffca7b 1141 Gene3D G3DSA:2.130.10.10 55 255 3.1E-6 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Vc3S01_2390 746195e87587f4ae26ee2d985bffca7b 1141 Gene3D G3DSA:2.130.10.10 475 657 5.2E-12 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Vc3S01_2390 746195e87587f4ae26ee2d985bffca7b 1141 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 1101 1116 1.6E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Vc3S01_2390 746195e87587f4ae26ee2d985bffca7b 1141 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 1116 1132 1.6E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Vc3S01_3025 0004d6fb27c19192b7270a8f850ee7a8 341 SUPERFAMILY SSF161098 107 321 2.75E-16 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_3025 0004d6fb27c19192b7270a8f850ee7a8 341 Gene3D G3DSA:1.10.3720.10 102 332 7.3E-19 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_3025 0004d6fb27c19192b7270a8f850ee7a8 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 132 338 9.6E-35 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Vc3S01_2509 38570e3932dec1b04fbacfc99e985e65 196 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 5 191 1.3E-68 T 12-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 Vc3S01_2509 38570e3932dec1b04fbacfc99e985e65 196 SUPERFAMILY SSF53178 5 194 3.14E-69 T 12-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 Vc3S01_2509 38570e3932dec1b04fbacfc99e985e65 196 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 18 31 - T 12-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 Vc3S01_2509 38570e3932dec1b04fbacfc99e985e65 196 Pfam PF01195 Peptidyl-tRNA hydrolase 7 190 4.8E-53 T 12-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 Vc3S01_2509 38570e3932dec1b04fbacfc99e985e65 196 Gene3D G3DSA:3.40.50.1470 1 196 1.3E-76 T 12-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 Vc3S01_2509 38570e3932dec1b04fbacfc99e985e65 196 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 112 122 - T 12-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 Vc3S01_2509 38570e3932dec1b04fbacfc99e985e65 196 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 5 184 35.602 T 12-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 Vc3S01_0675 f34f631f2fc49ddd4ae46f90270ca449 423 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 18 60 8.9E-8 T 12-10-2018 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal Vc3S01_A0541 01b3f713af440ed172928e7b41a81fb0 301 Pfam PF00892 EamA-like transporter family 3 135 4.1E-19 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Vc3S01_A0541 01b3f713af440ed172928e7b41a81fb0 301 Pfam PF00892 EamA-like transporter family 151 280 2.7E-18 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Vc3S01_A0541 01b3f713af440ed172928e7b41a81fb0 301 SUPERFAMILY SSF103481 35 138 3.27E-11 T 12-10-2018 Vc3S01_A0541 01b3f713af440ed172928e7b41a81fb0 301 SUPERFAMILY SSF103481 211 282 3.27E-10 T 12-10-2018 Vc3S01_0949 60fbca33d3415e9d16ebd49a1d63bdef 294 Gene3D G3DSA:2.70.98.10 2 294 2.9E-85 T 12-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 Vc3S01_0949 60fbca33d3415e9d16ebd49a1d63bdef 294 Pfam PF01263 Aldose 1-epimerase 27 291 2.4E-49 T 12-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 Vc3S01_0949 60fbca33d3415e9d16ebd49a1d63bdef 294 PIRSF PIRSF016020 3 294 5.2E-64 T 12-10-2018 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 Vc3S01_0949 60fbca33d3415e9d16ebd49a1d63bdef 294 SUPERFAMILY SSF74650 8 289 2.13E-74 T 12-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Vc3S01_A1367 ca5880f96f885d4d148f142cf84d8a0f 128 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Vc3S01_A1367 ca5880f96f885d4d148f142cf84d8a0f 128 SMART SM00422 1 70 4.7E-25 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Vc3S01_A1367 ca5880f96f885d4d148f142cf84d8a0f 128 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 127 2.8E-61 T 12-10-2018 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 Vc3S01_A1367 ca5880f96f885d4d148f142cf84d8a0f 128 Pfam PF13411 MerR HTH family regulatory protein 1 67 6.9E-17 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Vc3S01_A1367 ca5880f96f885d4d148f142cf84d8a0f 128 SUPERFAMILY SSF46955 1 126 1.39E-32 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily Vc3S01_A1367 ca5880f96f885d4d148f142cf84d8a0f 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 9.0E-8 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Vc3S01_A1367 ca5880f96f885d4d148f142cf84d8a0f 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 9.0E-8 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Vc3S01_A1367 ca5880f96f885d4d148f142cf84d8a0f 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 9.0E-8 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Vc3S01_A1367 ca5880f96f885d4d148f142cf84d8a0f 128 Gene3D G3DSA:1.10.1660.10 1 125 1.2E-31 T 12-10-2018 Vc3S01_A0621 c41efc2980ea4c27eb114ab73bb04c74 440 Pfam PF03109 ABC1 family 115 230 3.0E-29 T 12-10-2018 IPR004147 UbiB domain Vc3S01_A0621 c41efc2980ea4c27eb114ab73bb04c74 440 SUPERFAMILY SSF56112 98 330 7.94E-17 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily Vc3S01_A1189 830bdd7e74c73f5b5c17a66e1b6ae5ac 568 Gene3D G3DSA:3.30.70.610 368 430 5.2E-18 T 12-10-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 Vc3S01_A1189 830bdd7e74c73f5b5c17a66e1b6ae5ac 568 Gene3D G3DSA:3.30.70.610 264 345 3.0E-17 T 12-10-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 Vc3S01_A1189 830bdd7e74c73f5b5c17a66e1b6ae5ac 568 Pfam PF01565 FAD binding domain 41 178 1.4E-10 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Vc3S01_A1189 830bdd7e74c73f5b5c17a66e1b6ae5ac 568 Gene3D G3DSA:3.30.465.10 100 263 3.2E-71 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Vc3S01_A1189 830bdd7e74c73f5b5c17a66e1b6ae5ac 568 PIRSF PIRSF000101 1 566 1.2E-296 T 12-10-2018 IPR012256 D-lactate dehydrogenase GO:0005887|GO:0016901|GO:0019516|GO:0022904|GO:0050660 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 Vc3S01_A1189 830bdd7e74c73f5b5c17a66e1b6ae5ac 568 SUPERFAMILY SSF56176 4 268 4.53E-68 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Vc3S01_A1189 830bdd7e74c73f5b5c17a66e1b6ae5ac 568 Pfam PF09330 D-lactate dehydrogenase, membrane binding 273 561 3.0E-136 T 12-10-2018 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 Vc3S01_A1189 830bdd7e74c73f5b5c17a66e1b6ae5ac 568 SUPERFAMILY SSF55103 271 561 1.46E-105 T 12-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 Vc3S01_A1189 830bdd7e74c73f5b5c17a66e1b6ae5ac 568 Gene3D G3DSA:3.30.43.10 1 96 2.2E-13 T 12-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 Vc3S01_A1189 830bdd7e74c73f5b5c17a66e1b6ae5ac 568 Gene3D G3DSA:3.30.1370.20 431 515 6.5E-39 T 12-10-2018 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 Vc3S01_A1189 830bdd7e74c73f5b5c17a66e1b6ae5ac 568 Hamap MF_02092 Quinone-dependent D-lactate dehydrogenase [dld]. 4 564 54.875 T 12-10-2018 IPR012256 D-lactate dehydrogenase GO:0005887|GO:0016901|GO:0019516|GO:0022904|GO:0050660 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 Vc3S01_A0204 8eecd9a1ef03bb1da623e64905be1f2d 331 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 298 1.5E-50 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 Vc3S01_A0204 8eecd9a1ef03bb1da623e64905be1f2d 331 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 6 327 2.0E-33 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 Vc3S01_A0204 8eecd9a1ef03bb1da623e64905be1f2d 331 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 195 217 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Vc3S01_A0204 8eecd9a1ef03bb1da623e64905be1f2d 331 Gene3D G3DSA:3.40.50.720 103 298 1.7E-132 T 12-10-2018 Vc3S01_A0204 8eecd9a1ef03bb1da623e64905be1f2d 331 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 148 175 - T 12-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 Vc3S01_A0204 8eecd9a1ef03bb1da623e64905be1f2d 331 Gene3D G3DSA:3.40.50.720 4 318 1.7E-132 T 12-10-2018 Vc3S01_A0204 8eecd9a1ef03bb1da623e64905be1f2d 331 SUPERFAMILY SSF52283 1 136 2.27E-41 T 12-10-2018 Vc3S01_A0204 8eecd9a1ef03bb1da623e64905be1f2d 331 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 224 240 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Vc3S01_A0204 8eecd9a1ef03bb1da623e64905be1f2d 331 SUPERFAMILY SSF51735 103 299 1.35E-53 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_1145 d43e03795f0fa5cb47911eb3d5c18429 177 Pfam PF13302 Acetyltransferase (GNAT) domain 8 146 1.0E-15 T 12-10-2018 IPR000182 GNAT domain Vc3S01_1145 d43e03795f0fa5cb47911eb3d5c18429 177 SUPERFAMILY SSF55729 2 171 1.39E-28 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_1145 d43e03795f0fa5cb47911eb3d5c18429 177 Gene3D G3DSA:3.40.630.30 1 174 2.1E-27 T 12-10-2018 Vc3S01_1553 b5e667d97ae72cd8517545c0977815d0 300 SUPERFAMILY SSF53850 89 296 1.19E-15 T 12-10-2018 Vc3S01_1553 b5e667d97ae72cd8517545c0977815d0 300 Pfam PF03466 LysR substrate binding domain 132 298 2.3E-8 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_1553 b5e667d97ae72cd8517545c0977815d0 300 Gene3D G3DSA:3.40.190.10 109 169 3.9E-8 T 12-10-2018 Vc3S01_1553 b5e667d97ae72cd8517545c0977815d0 300 SUPERFAMILY SSF46785 4 84 6.6E-7 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_1553 b5e667d97ae72cd8517545c0977815d0 300 Gene3D G3DSA:3.40.190.10 170 245 3.9E-8 T 12-10-2018 Vc3S01_1553 b5e667d97ae72cd8517545c0977815d0 300 Gene3D G3DSA:1.10.10.10 1 86 2.1E-9 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_1635 3f8af4ed3fcb3f983a78d3b9f9375157 336 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 80 99 - T 12-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 Vc3S01_1635 3f8af4ed3fcb3f983a78d3b9f9375157 336 SUPERFAMILY SSF51395 1 336 2.7E-108 T 12-10-2018 Vc3S01_1635 3f8af4ed3fcb3f983a78d3b9f9375157 336 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 336 51.485 T 12-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 Vc3S01_1635 3f8af4ed3fcb3f983a78d3b9f9375157 336 PIRSF PIRSF000164 10 336 1.1E-105 T 12-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Vc3S01_1635 3f8af4ed3fcb3f983a78d3b9f9375157 336 Gene3D G3DSA:3.20.20.70 2 336 4.8E-143 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_1635 3f8af4ed3fcb3f983a78d3b9f9375157 336 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 336 1.6E-147 T 12-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 Vc3S01_1635 3f8af4ed3fcb3f983a78d3b9f9375157 336 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 12-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 Vc3S01_1635 3f8af4ed3fcb3f983a78d3b9f9375157 336 Pfam PF01180 Dihydroorotate dehydrogenase 47 336 9.3E-91 T 12-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 Vc3S01_3005 4465e1f645ede2773e8c08198a2c7acb 123 Gene3D G3DSA:1.10.3830.10 8 123 1.1E-39 T 12-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 Vc3S01_3005 4465e1f645ede2773e8c08198a2c7acb 123 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 75 86 - T 12-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 Vc3S01_3005 4465e1f645ede2773e8c08198a2c7acb 123 Pfam PF01219 Prokaryotic diacylglycerol kinase 21 122 4.1E-35 T 12-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 Vc3S01_A1523 8787f67bb40ae5942599e39d72e32b9b 122 SUPERFAMILY SSF46785 17 119 1.51E-28 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A1523 8787f67bb40ae5942599e39d72e32b9b 122 Pfam PF01638 HxlR-like helix-turn-helix 31 116 1.3E-23 T 12-10-2018 IPR002577 Helix-turn-helix, HxlR type Vc3S01_A1523 8787f67bb40ae5942599e39d72e32b9b 122 Gene3D G3DSA:1.10.10.10 5 122 1.4E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A1552 1e05b163133b97b6317846f9129d588d 188 Gene3D G3DSA:2.60.40.420 65 188 8.3E-19 T 12-10-2018 IPR008972 Cupredoxin Vc3S01_A1552 1e05b163133b97b6317846f9129d588d 188 SUPERFAMILY SSF49503 77 186 2.09E-21 T 12-10-2018 IPR008972 Cupredoxin Vc3S01_A0914 0bfbcfd85eda64d5e77c0e744a0e4b2c 506 SMART SM00052 252 498 1.5E-88 T 12-10-2018 IPR001633 EAL domain Vc3S01_A0914 0bfbcfd85eda64d5e77c0e744a0e4b2c 506 SUPERFAMILY SSF141868 259 501 4.97E-74 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_A0914 0bfbcfd85eda64d5e77c0e744a0e4b2c 506 Gene3D G3DSA:3.20.20.450 251 504 7.0E-78 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_A0914 0bfbcfd85eda64d5e77c0e744a0e4b2c 506 Pfam PF12792 CSS motif domain associated with EAL 42 226 1.8E-24 T 12-10-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain Vc3S01_A0914 0bfbcfd85eda64d5e77c0e744a0e4b2c 506 Pfam PF00563 EAL domain 260 493 2.4E-61 T 12-10-2018 IPR001633 EAL domain Vc3S01_A1990 0e109d1fc0b3e4d8aa40d62606dd6d94 160 Pfam PF13412 Winged helix-turn-helix DNA-binding 11 58 3.8E-18 T 12-10-2018 Vc3S01_A1990 0e109d1fc0b3e4d8aa40d62606dd6d94 160 SMART SM00344 11 120 1.2E-34 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 Vc3S01_A1990 0e109d1fc0b3e4d8aa40d62606dd6d94 160 SUPERFAMILY SSF54909 71 159 1.74E-15 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel Vc3S01_A1990 0e109d1fc0b3e4d8aa40d62606dd6d94 160 Gene3D G3DSA:3.30.70.920 63 155 1.6E-18 T 12-10-2018 Vc3S01_A1990 0e109d1fc0b3e4d8aa40d62606dd6d94 160 SUPERFAMILY SSF46785 10 71 5.27E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A1990 0e109d1fc0b3e4d8aa40d62606dd6d94 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 38 57 2.5E-13 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Vc3S01_A1990 0e109d1fc0b3e4d8aa40d62606dd6d94 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 11 27 2.5E-13 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Vc3S01_A1990 0e109d1fc0b3e4d8aa40d62606dd6d94 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 27 38 2.5E-13 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Vc3S01_A1990 0e109d1fc0b3e4d8aa40d62606dd6d94 160 Gene3D G3DSA:1.10.10.10 1 62 5.3E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A1990 0e109d1fc0b3e4d8aa40d62606dd6d94 160 Pfam PF01037 Lrp/AsnC ligand binding domain 79 149 1.3E-11 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Vc3S01_A1164 ed0262839bbca2b3a9c8d3e301e68e99 298 SMART SM00342 207 290 1.1E-26 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_A1164 ed0262839bbca2b3a9c8d3e301e68e99 298 Pfam PF12833 Helix-turn-helix domain 213 291 7.2E-18 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_A1164 ed0262839bbca2b3a9c8d3e301e68e99 298 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 259 274 3.0E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Vc3S01_A1164 ed0262839bbca2b3a9c8d3e301e68e99 298 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 274 290 3.0E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Vc3S01_A1164 ed0262839bbca2b3a9c8d3e301e68e99 298 SUPERFAMILY SSF51215 35 139 8.89E-8 T 12-10-2018 IPR037923 Transcription regulator HTH-like Vc3S01_A1164 ed0262839bbca2b3a9c8d3e301e68e99 298 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 244 286 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Vc3S01_A1164 ed0262839bbca2b3a9c8d3e301e68e99 298 Gene3D G3DSA:1.10.10.60 188 297 1.2E-24 T 12-10-2018 Vc3S01_A1164 ed0262839bbca2b3a9c8d3e301e68e99 298 SUPERFAMILY SSF46689 243 293 1.43E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_A1164 ed0262839bbca2b3a9c8d3e301e68e99 298 Gene3D G3DSA:2.60.120.280 50 150 3.6E-5 T 12-10-2018 Vc3S01_0570 9ed5a8a9c8f0118b1b6e2700cc1d01f2 476 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 8 460 4.5E-151 T 12-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 Vc3S01_0570 9ed5a8a9c8f0118b1b6e2700cc1d01f2 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 7.5E-68 T 12-10-2018 Vc3S01_0570 9ed5a8a9c8f0118b1b6e2700cc1d01f2 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 7.5E-68 T 12-10-2018 Vc3S01_0570 9ed5a8a9c8f0118b1b6e2700cc1d01f2 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 7.5E-68 T 12-10-2018 Vc3S01_0570 9ed5a8a9c8f0118b1b6e2700cc1d01f2 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 7.5E-68 T 12-10-2018 Vc3S01_0570 9ed5a8a9c8f0118b1b6e2700cc1d01f2 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 7.5E-68 T 12-10-2018 Vc3S01_0570 9ed5a8a9c8f0118b1b6e2700cc1d01f2 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 7.5E-68 T 12-10-2018 Vc3S01_0570 9ed5a8a9c8f0118b1b6e2700cc1d01f2 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 7.5E-68 T 12-10-2018 Vc3S01_0570 9ed5a8a9c8f0118b1b6e2700cc1d01f2 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 7.5E-68 T 12-10-2018 Vc3S01_0570 9ed5a8a9c8f0118b1b6e2700cc1d01f2 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 7.5E-68 T 12-10-2018 Vc3S01_0570 9ed5a8a9c8f0118b1b6e2700cc1d01f2 476 Gene3D G3DSA:3.50.50.60 150 271 2.1E-123 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_0570 9ed5a8a9c8f0118b1b6e2700cc1d01f2 476 PIRSF PIRSF000350 1 468 2.4E-84 T 12-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 Vc3S01_0570 9ed5a8a9c8f0118b1b6e2700cc1d01f2 476 SUPERFAMILY SSF51905 6 369 2.74E-57 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_0570 9ed5a8a9c8f0118b1b6e2700cc1d01f2 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 7.6E-40 T 12-10-2018 Vc3S01_0570 9ed5a8a9c8f0118b1b6e2700cc1d01f2 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 7.6E-40 T 12-10-2018 Vc3S01_0570 9ed5a8a9c8f0118b1b6e2700cc1d01f2 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 7.6E-40 T 12-10-2018 Vc3S01_0570 9ed5a8a9c8f0118b1b6e2700cc1d01f2 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 7.6E-40 T 12-10-2018 Vc3S01_0570 9ed5a8a9c8f0118b1b6e2700cc1d01f2 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 7.6E-40 T 12-10-2018 Vc3S01_0570 9ed5a8a9c8f0118b1b6e2700cc1d01f2 476 Gene3D G3DSA:3.50.50.60 9 332 2.1E-123 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_0570 9ed5a8a9c8f0118b1b6e2700cc1d01f2 476 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 42 52 - T 12-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 Vc3S01_0570 9ed5a8a9c8f0118b1b6e2700cc1d01f2 476 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 328 1.4E-63 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Vc3S01_0570 9ed5a8a9c8f0118b1b6e2700cc1d01f2 476 SUPERFAMILY SSF55424 346 466 8.93E-39 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Vc3S01_0570 9ed5a8a9c8f0118b1b6e2700cc1d01f2 476 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 455 2.7E-35 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Vc3S01_0570 9ed5a8a9c8f0118b1b6e2700cc1d01f2 476 Gene3D G3DSA:3.30.390.30 346 467 1.1E-44 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Vc3S01_p10060 1e029c26400681642043fdc5fac1f1cc 130 Pfam PF00089 Trypsin 32 115 9.2E-7 T 12-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 Vc3S01_p10060 1e029c26400681642043fdc5fac1f1cc 130 Gene3D G3DSA:2.40.10.10 28 118 2.8E-9 T 12-10-2018 Vc3S01_p10060 1e029c26400681642043fdc5fac1f1cc 130 SUPERFAMILY SSF50494 11 115 1.4E-12 T 12-10-2018 IPR009003 Peptidase S1, PA clan Vc3S01_A0876 721705aedb30a7a92d600cf11e90ac2d 497 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 275 286 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 Vc3S01_A0876 721705aedb30a7a92d600cf11e90ac2d 497 Pfam PF00171 Aldehyde dehydrogenase family 14 477 3.7E-137 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Vc3S01_A0876 721705aedb30a7a92d600cf11e90ac2d 497 Gene3D G3DSA:3.40.605.10 24 458 2.7E-141 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Vc3S01_A0876 721705aedb30a7a92d600cf11e90ac2d 497 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 6 481 1.3E-240 T 12-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 Vc3S01_A0876 721705aedb30a7a92d600cf11e90ac2d 497 SUPERFAMILY SSF53720 2 484 2.23E-143 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Vc3S01_A0876 721705aedb30a7a92d600cf11e90ac2d 497 Gene3D G3DSA:3.40.309.10 250 450 2.7E-141 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Vc3S01_1715 2087f5f010bbffe1daf17ae00e6102bf 203 Gene3D G3DSA:2.40.30.20 94 190 3.7E-27 T 12-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Vc3S01_1715 2087f5f010bbffe1daf17ae00e6102bf 203 PIRSF PIRSF000498 1 203 1.7E-67 T 12-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Vc3S01_1715 2087f5f010bbffe1daf17ae00e6102bf 203 SUPERFAMILY SSF63380 93 198 1.19E-28 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Vc3S01_1715 2087f5f010bbffe1daf17ae00e6102bf 203 Gene3D G3DSA:2.40.30.20 1 89 6.2E-30 T 12-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Vc3S01_1715 2087f5f010bbffe1daf17ae00e6102bf 203 SUPERFAMILY SSF63380 1 93 7.57E-24 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Vc3S01_1715 2087f5f010bbffe1daf17ae00e6102bf 203 Pfam PF00677 Lumazine binding domain 100 184 7.0E-20 T 12-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Vc3S01_1715 2087f5f010bbffe1daf17ae00e6102bf 203 Pfam PF00677 Lumazine binding domain 3 87 9.2E-21 T 12-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Vc3S01_1715 2087f5f010bbffe1daf17ae00e6102bf 203 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 202 5.9E-73 T 12-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Vc3S01_A1617 7773fcd61f393a5214c6ab25f99074a7 401 Pfam PF11301 Protein of unknown function (DUF3103) 41 400 1.3E-166 T 12-10-2018 IPR021452 Protein of unknown function DUF3103 Vc3S01_0895 69584ecc6a3abe64c041fc00abb9418f 704 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 312 491 2.2E-53 T 12-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Vc3S01_0895 69584ecc6a3abe64c041fc00abb9418f 704 SUPERFAMILY SSF48179 494 593 1.19E-27 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Vc3S01_0895 69584ecc6a3abe64c041fc00abb9418f 704 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 105 125 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 Vc3S01_0895 69584ecc6a3abe64c041fc00abb9418f 704 TIGRFAM TIGR02440 FadJ: fatty oxidation complex, alpha subunit FadJ 6 703 0.0 T 12-10-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Vc3S01_0895 69584ecc6a3abe64c041fc00abb9418f 704 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 212 6.6E-41 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 Vc3S01_0895 69584ecc6a3abe64c041fc00abb9418f 704 SUPERFAMILY SSF51735 310 491 1.08E-46 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_0895 69584ecc6a3abe64c041fc00abb9418f 704 Gene3D G3DSA:1.10.1040.50 497 698 9.6E-71 T 12-10-2018 Vc3S01_0895 69584ecc6a3abe64c041fc00abb9418f 704 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 494 587 8.8E-25 T 12-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Vc3S01_0895 69584ecc6a3abe64c041fc00abb9418f 704 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 616 691 4.3E-5 T 12-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Vc3S01_0895 69584ecc6a3abe64c041fc00abb9418f 704 Gene3D G3DSA:3.90.226.10 1 307 1.6E-97 T 12-10-2018 Vc3S01_0895 69584ecc6a3abe64c041fc00abb9418f 704 SUPERFAMILY SSF48179 610 704 2.98E-27 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Vc3S01_0895 69584ecc6a3abe64c041fc00abb9418f 704 Hamap MF_01617 Fatty acid oxidation complex subunit alpha [fadJ]. 1 703 53.011 T 12-10-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Vc3S01_0895 69584ecc6a3abe64c041fc00abb9418f 704 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 491 516 - T 12-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Vc3S01_0895 69584ecc6a3abe64c041fc00abb9418f 704 SUPERFAMILY SSF52096 3 302 3.23E-66 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Vc3S01_0895 69584ecc6a3abe64c041fc00abb9418f 704 Gene3D G3DSA:3.40.50.720 310 496 3.4E-57 T 12-10-2018 Vc3S01_2836 1f844128f74f44c71c49810d0560916a 650 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 9 345 6.2E-170 T 12-10-2018 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.197 Vc3S01_2836 1f844128f74f44c71c49810d0560916a 650 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 386 467 2.4E-11 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 Vc3S01_2836 1f844128f74f44c71c49810d0560916a 650 Pfam PF02378 Phosphotransferase system, EIIC 18 278 3.2E-19 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 Vc3S01_2836 1f844128f74f44c71c49810d0560916a 650 SUPERFAMILY SSF52794 385 472 1.92E-24 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 Vc3S01_2836 1f844128f74f44c71c49810d0560916a 650 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 550 566 - T 12-10-2018 IPR002178 PTS EIIA type-2 domain Vc3S01_2836 1f844128f74f44c71c49810d0560916a 650 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 507 644 8.3E-34 T 12-10-2018 IPR002178 PTS EIIA type-2 domain Vc3S01_2836 1f844128f74f44c71c49810d0560916a 650 SUPERFAMILY SSF55804 506 645 1.57E-40 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 Vc3S01_2836 1f844128f74f44c71c49810d0560916a 650 Gene3D G3DSA:3.40.930.10 502 647 6.7E-51 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 Vc3S01_2836 1f844128f74f44c71c49810d0560916a 650 Gene3D G3DSA:3.40.50.2300 372 476 9.6E-36 T 12-10-2018 Vc3S01_3111 3f13901699de93549e4caa275ea6e039 292 Pfam PF00892 EamA-like transporter family 138 275 7.8E-7 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Vc3S01_3111 3f13901699de93549e4caa275ea6e039 292 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 11 274 6.5E-71 T 12-10-2018 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 Vc3S01_3111 3f13901699de93549e4caa275ea6e039 292 SUPERFAMILY SSF103481 184 276 6.28E-6 T 12-10-2018 Vc3S01_3111 3f13901699de93549e4caa275ea6e039 292 SUPERFAMILY SSF103481 35 131 5.75E-6 T 12-10-2018 Vc3S01_A1404 7516927c3c0ee5f1ec383c1adf57caa6 380 SMART SM00448 1 118 1.1E-8 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A1404 7516927c3c0ee5f1ec383c1adf57caa6 380 Pfam PF00072 Response regulator receiver domain 3 117 2.5E-15 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A1404 7516927c3c0ee5f1ec383c1adf57caa6 380 SUPERFAMILY SSF141868 140 379 3.27E-66 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_A1404 7516927c3c0ee5f1ec383c1adf57caa6 380 SUPERFAMILY SSF52172 1 125 7.4E-18 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_A1404 7516927c3c0ee5f1ec383c1adf57caa6 380 Gene3D G3DSA:3.40.50.2300 1 129 4.1E-20 T 12-10-2018 Vc3S01_A1404 7516927c3c0ee5f1ec383c1adf57caa6 380 Gene3D G3DSA:3.20.20.450 135 379 1.4E-68 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_A1404 7516927c3c0ee5f1ec383c1adf57caa6 380 Pfam PF00563 EAL domain 141 370 2.3E-57 T 12-10-2018 IPR001633 EAL domain Vc3S01_A1404 7516927c3c0ee5f1ec383c1adf57caa6 380 SMART SM00052 134 375 9.2E-59 T 12-10-2018 IPR001633 EAL domain Vc3S01_0569 29f9c79e812216ce6269301597964e83 632 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Vc3S01_0569 29f9c79e812216ce6269301597964e83 632 Pfam PF00364 Biotin-requiring enzyme 4 73 7.7E-21 T 12-10-2018 IPR000089 Biotin/lipoyl attachment Vc3S01_0569 29f9c79e812216ce6269301597964e83 632 Pfam PF00364 Biotin-requiring enzyme 206 276 1.1E-21 T 12-10-2018 IPR000089 Biotin/lipoyl attachment Vc3S01_0569 29f9c79e812216ce6269301597964e83 632 Pfam PF00364 Biotin-requiring enzyme 105 175 8.5E-21 T 12-10-2018 IPR000089 Biotin/lipoyl attachment Vc3S01_0569 29f9c79e812216ce6269301597964e83 632 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 127 156 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Vc3S01_0569 29f9c79e812216ce6269301597964e83 632 Gene3D G3DSA:3.30.559.10 385 632 9.3E-96 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Vc3S01_0569 29f9c79e812216ce6269301597964e83 632 SUPERFAMILY SSF51230 104 196 4.32E-23 T 12-10-2018 IPR011053 Single hybrid motif Vc3S01_0569 29f9c79e812216ce6269301597964e83 632 SUPERFAMILY SSF51230 1 94 5.63E-24 T 12-10-2018 IPR011053 Single hybrid motif Vc3S01_0569 29f9c79e812216ce6269301597964e83 632 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 184 632 7.9E-205 T 12-10-2018 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 Vc3S01_0569 29f9c79e812216ce6269301597964e83 632 Gene3D G3DSA:2.40.50.100 104 181 9.8E-21 T 12-10-2018 Vc3S01_0569 29f9c79e812216ce6269301597964e83 632 Gene3D G3DSA:2.40.50.100 205 283 2.5E-19 T 12-10-2018 Vc3S01_0569 29f9c79e812216ce6269301597964e83 632 Gene3D G3DSA:2.40.50.100 1 80 7.9E-22 T 12-10-2018 Vc3S01_0569 29f9c79e812216ce6269301597964e83 632 Gene3D G3DSA:4.10.320.10 324 369 6.3E-21 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 Vc3S01_0569 29f9c79e812216ce6269301597964e83 632 SUPERFAMILY SSF51230 206 297 1.02E-22 T 12-10-2018 IPR011053 Single hybrid motif Vc3S01_0569 29f9c79e812216ce6269301597964e83 632 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 228 257 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Vc3S01_0569 29f9c79e812216ce6269301597964e83 632 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 401 631 3.1E-79 T 12-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 Vc3S01_0569 29f9c79e812216ce6269301597964e83 632 Pfam PF02817 e3 binding domain 325 359 1.8E-14 T 12-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 Vc3S01_0569 29f9c79e812216ce6269301597964e83 632 SUPERFAMILY SSF52777 390 631 2.0E-80 T 12-10-2018 Vc3S01_0569 29f9c79e812216ce6269301597964e83 632 SUPERFAMILY SSF47005 318 363 3.4E-13 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 Vc3S01_3065 00459b52a976f419f9f74ee9d9c15b40 542 Gene3D G3DSA:3.90.228.20 236 526 1.2E-236 T 12-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 Vc3S01_3065 00459b52a976f419f9f74ee9d9c15b40 542 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 266 281 - T 12-10-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 Vc3S01_3065 00459b52a976f419f9f74ee9d9c15b40 542 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 10 541 1.1E-277 T 12-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 Vc3S01_3065 00459b52a976f419f9f74ee9d9c15b40 542 SUPERFAMILY SSF68923 11 228 8.72E-89 T 12-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 Vc3S01_3065 00459b52a976f419f9f74ee9d9c15b40 542 SUPERFAMILY SSF53795 230 541 7.98E-128 T 12-10-2018 Vc3S01_3065 00459b52a976f419f9f74ee9d9c15b40 542 Gene3D G3DSA:3.40.449.10 25 235 1.2E-236 T 12-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 Vc3S01_3065 00459b52a976f419f9f74ee9d9c15b40 542 Pfam PF01293 Phosphoenolpyruvate carboxykinase 24 491 2.8E-212 T 12-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 Vc3S01_3065 00459b52a976f419f9f74ee9d9c15b40 542 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 18 539 55.389 T 12-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 Vc3S01_3065 00459b52a976f419f9f74ee9d9c15b40 542 Gene3D G3DSA:2.170.8.10 49 351 1.2E-236 T 12-10-2018 Vc3S01_3065 00459b52a976f419f9f74ee9d9c15b40 542 PIRSF PIRSF006294 4 541 1.2E-228 T 12-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 Vc3S01_A1835 7c325e76ec804d7a016526075774c8dd 166 Gene3D G3DSA:2.30.180.10 11 166 3.7E-52 T 12-10-2018 IPR036378 FAS1 domain superfamily Vc3S01_A1835 7c325e76ec804d7a016526075774c8dd 166 SMART SM00554 67 166 1.8E-34 T 12-10-2018 IPR000782 FAS1 domain Vc3S01_A1835 7c325e76ec804d7a016526075774c8dd 166 SUPERFAMILY SSF82153 33 165 1.96E-44 T 12-10-2018 IPR036378 FAS1 domain superfamily Vc3S01_A1835 7c325e76ec804d7a016526075774c8dd 166 Pfam PF02469 Fasciclin domain 43 165 4.0E-38 T 12-10-2018 IPR000782 FAS1 domain Vc3S01_0925 d7ca6cd154ef15104424a2e005c04c22 729 Gene3D G3DSA:3.30.300.150 586 711 5.1E-40 T 12-10-2018 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Vc3S01_0925 d7ca6cd154ef15104424a2e005c04c22 729 SUPERFAMILY SSF48019 243 361 1.36E-32 T 12-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 Vc3S01_0925 d7ca6cd154ef15104424a2e005c04c22 729 Pfam PF12168 DNA polymerase III subunits tau domain IV DnaB-binding 512 586 2.0E-20 T 12-10-2018 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Vc3S01_0925 d7ca6cd154ef15104424a2e005c04c22 729 Gene3D G3DSA:1.20.272.10 242 361 1.4E-39 T 12-10-2018 Vc3S01_0925 d7ca6cd154ef15104424a2e005c04c22 729 Gene3D G3DSA:3.40.50.300 13 177 6.4E-102 T 12-10-2018 Vc3S01_0925 d7ca6cd154ef15104424a2e005c04c22 729 Gene3D G3DSA:1.10.8.60 8 240 6.4E-102 T 12-10-2018 Vc3S01_0925 d7ca6cd154ef15104424a2e005c04c22 729 Pfam PF13177 DNA polymerase III, delta subunit 20 178 6.1E-44 T 12-10-2018 Vc3S01_0925 d7ca6cd154ef15104424a2e005c04c22 729 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 355 1.2E-133 T 12-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 Vc3S01_0925 d7ca6cd154ef15104424a2e005c04c22 729 SMART SM00382 37 179 9.4E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_0925 d7ca6cd154ef15104424a2e005c04c22 729 SUPERFAMILY SSF52540 32 223 4.51E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0925 d7ca6cd154ef15104424a2e005c04c22 729 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 233 359 2.7E-32 T 12-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 Vc3S01_0925 d7ca6cd154ef15104424a2e005c04c22 729 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 588 726 1.1E-49 T 12-10-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Vc3S01_A0231 6d1817ff4a96be9933207304f9d16d0b 636 Gene3D G3DSA:1.20.58.930 368 463 2.4E-235 T 12-10-2018 Vc3S01_A0231 6d1817ff4a96be9933207304f9d16d0b 636 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 3 635 42.516 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Vc3S01_A0231 6d1817ff4a96be9933207304f9d16d0b 636 Gene3D G3DSA:2.40.37.10 14 572 2.4E-235 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Vc3S01_A0231 6d1817ff4a96be9933207304f9d16d0b 636 Gene3D G3DSA:3.20.20.10 67 351 2.4E-235 T 12-10-2018 IPR029066 PLP-binding barrel Vc3S01_A0231 6d1817ff4a96be9933207304f9d16d0b 636 PIRSF PIRSF001336 2 636 3.8E-251 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Vc3S01_A0231 6d1817ff4a96be9933207304f9d16d0b 636 SUPERFAMILY SSF51419 66 348 9.98E-65 T 12-10-2018 IPR029066 PLP-binding barrel Vc3S01_A0231 6d1817ff4a96be9933207304f9d16d0b 636 PRINTS PR01180 Arginine decarboxylase signature 492 517 1.4E-62 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Vc3S01_A0231 6d1817ff4a96be9933207304f9d16d0b 636 PRINTS PR01180 Arginine decarboxylase signature 467 488 1.4E-62 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Vc3S01_A0231 6d1817ff4a96be9933207304f9d16d0b 636 PRINTS PR01180 Arginine decarboxylase signature 66 81 1.4E-62 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Vc3S01_A0231 6d1817ff4a96be9933207304f9d16d0b 636 PRINTS PR01180 Arginine decarboxylase signature 199 221 1.4E-62 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Vc3S01_A0231 6d1817ff4a96be9933207304f9d16d0b 636 PRINTS PR01180 Arginine decarboxylase signature 90 104 1.4E-62 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Vc3S01_A0231 6d1817ff4a96be9933207304f9d16d0b 636 PRINTS PR01180 Arginine decarboxylase signature 545 566 1.4E-62 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Vc3S01_A0231 6d1817ff4a96be9933207304f9d16d0b 636 PRINTS PR01180 Arginine decarboxylase signature 175 196 1.4E-62 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Vc3S01_A0231 6d1817ff4a96be9933207304f9d16d0b 636 PRINTS PR01180 Arginine decarboxylase signature 326 343 1.4E-62 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Vc3S01_A0231 6d1817ff4a96be9933207304f9d16d0b 636 PRINTS PR01180 Arginine decarboxylase signature 149 164 1.4E-62 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Vc3S01_A0231 6d1817ff4a96be9933207304f9d16d0b 636 TIGRFAM TIGR01273 speA: arginine decarboxylase 8 634 2.3E-266 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Vc3S01_A0231 6d1817ff4a96be9933207304f9d16d0b 636 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 78 346 1.7E-49 T 12-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Vc3S01_A0231 6d1817ff4a96be9933207304f9d16d0b 636 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 545 558 1.4E-12 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Vc3S01_A0231 6d1817ff4a96be9933207304f9d16d0b 636 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 242 255 1.4E-12 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Vc3S01_A0231 6d1817ff4a96be9933207304f9d16d0b 636 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 98 116 1.4E-12 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Vc3S01_A0231 6d1817ff4a96be9933207304f9d16d0b 636 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 336 355 1.4E-12 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Vc3S01_1969 303073457136411694848fd7d49949c8 584 Gene3D G3DSA:3.40.50.300 1 168 2.0E-29 T 12-10-2018 Vc3S01_1969 303073457136411694848fd7d49949c8 584 SMART SM00490 265 344 1.1E-10 T 12-10-2018 IPR001650 Helicase, C-terminal Vc3S01_1969 303073457136411694848fd7d49949c8 584 Gene3D G3DSA:3.40.50.300 209 367 2.7E-33 T 12-10-2018 Vc3S01_1969 303073457136411694848fd7d49949c8 584 Pfam PF00271 Helicase conserved C-terminal domain 239 342 6.6E-14 T 12-10-2018 IPR001650 Helicase, C-terminal Vc3S01_1969 303073457136411694848fd7d49949c8 584 SMART SM00487 1 177 1.8E-14 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Vc3S01_1969 303073457136411694848fd7d49949c8 584 SUPERFAMILY SSF57829 425 465 2.75E-6 T 12-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 Vc3S01_1969 303073457136411694848fd7d49949c8 584 SUPERFAMILY SSF52540 48 362 3.39E-40 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_1969 303073457136411694848fd7d49949c8 584 Pfam PF04851 Type III restriction enzyme, res subunit 2 154 9.3E-24 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Vc3S01_2196 0ee85229d5cad984f4a3f27a9cdde473 223 Gene3D G3DSA:1.10.150.20 86 162 1.3E-25 T 12-10-2018 Vc3S01_2196 0ee85229d5cad984f4a3f27a9cdde473 223 Pfam PF07499 RuvA, C-terminal domain 179 222 6.8E-17 T 12-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 Vc3S01_2196 0ee85229d5cad984f4a3f27a9cdde473 223 SUPERFAMILY SSF50249 21 82 4.8E-19 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Vc3S01_2196 0ee85229d5cad984f4a3f27a9cdde473 223 Pfam PF14520 Helix-hairpin-helix domain 91 149 8.9E-14 T 12-10-2018 Vc3S01_2196 0ee85229d5cad984f4a3f27a9cdde473 223 Gene3D G3DSA:2.40.50.140 20 84 6.5E-28 T 12-10-2018 Vc3S01_2196 0ee85229d5cad984f4a3f27a9cdde473 223 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 20 223 31.682 T 12-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 Vc3S01_2196 0ee85229d5cad984f4a3f27a9cdde473 223 SUPERFAMILY SSF47781 85 155 2.06E-19 T 12-10-2018 IPR010994 RuvA domain 2-like Vc3S01_2196 0ee85229d5cad984f4a3f27a9cdde473 223 Pfam PF01330 RuvA N terminal domain 21 81 4.5E-21 T 12-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 Vc3S01_2196 0ee85229d5cad984f4a3f27a9cdde473 223 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 20 222 8.5E-65 T 12-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 Vc3S01_2196 0ee85229d5cad984f4a3f27a9cdde473 223 SUPERFAMILY SSF46929 177 222 1.03E-12 T 12-10-2018 IPR036267 RuvA, C-terminal domain superfamily Vc3S01_2196 0ee85229d5cad984f4a3f27a9cdde473 223 Gene3D G3DSA:1.10.8.10 176 223 3.7E-24 T 12-10-2018 Vc3S01_2196 0ee85229d5cad984f4a3f27a9cdde473 223 SMART SM00278 92 111 540.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Vc3S01_2196 0ee85229d5cad984f4a3f27a9cdde473 223 SMART SM00278 127 146 0.071 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Vc3S01_A0385 93aeeceaf32ec7c7b76bce8559c0e4ca 235 SUPERFAMILY SSF141868 19 229 6.67E-17 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_A0385 93aeeceaf32ec7c7b76bce8559c0e4ca 235 Gene3D G3DSA:3.20.20.450 12 233 1.4E-13 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_A0385 93aeeceaf32ec7c7b76bce8559c0e4ca 235 Pfam PF00563 EAL domain 24 211 3.8E-6 T 12-10-2018 IPR001633 EAL domain Vc3S01_3206 6a839a1b073a9ce0be6b4f6f3072e042 288 Gene3D G3DSA:1.10.287.80 6 284 1.0E-110 T 12-10-2018 Vc3S01_3206 6a839a1b073a9ce0be6b4f6f3072e042 288 SUPERFAMILY SSF52943 2 288 1.02E-96 T 12-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_3206 6a839a1b073a9ce0be6b4f6f3072e042 288 Pfam PF00231 ATP synthase 5 287 1.5E-98 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_3206 6a839a1b073a9ce0be6b4f6f3072e042 288 Gene3D G3DSA:3.40.1380.10 61 207 1.0E-110 T 12-10-2018 Vc3S01_3206 6a839a1b073a9ce0be6b4f6f3072e042 288 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 288 3.3E-112 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_3206 6a839a1b073a9ce0be6b4f6f3072e042 288 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 288 36.913 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_3206 6a839a1b073a9ce0be6b4f6f3072e042 288 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 274 287 - T 12-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_3206 6a839a1b073a9ce0be6b4f6f3072e042 288 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 1.1E-36 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_3206 6a839a1b073a9ce0be6b4f6f3072e042 288 PRINTS PR00126 ATP synthase gamma subunit signature 266 287 1.1E-36 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_3206 6a839a1b073a9ce0be6b4f6f3072e042 288 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 1.1E-36 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_3206 6a839a1b073a9ce0be6b4f6f3072e042 288 PRINTS PR00126 ATP synthase gamma subunit signature 235 254 1.1E-36 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_A1601 ff0926bff74384301f0681adf8418e2c 564 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 400 559 4.9E-50 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A1601 ff0926bff74384301f0681adf8418e2c 564 Pfam PF00990 Diguanylate cyclase, GGDEF domain 404 556 1.8E-44 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A1601 ff0926bff74384301f0681adf8418e2c 564 SUPERFAMILY SSF55073 409 558 1.1E-43 T 12-10-2018 IPR029787 Nucleotide cyclase Vc3S01_A1601 ff0926bff74384301f0681adf8418e2c 564 Gene3D G3DSA:1.20.1480.50 280 372 2.4E-9 T 12-10-2018 Vc3S01_A1601 ff0926bff74384301f0681adf8418e2c 564 Gene3D G3DSA:3.30.450.20 153 279 9.9E-18 T 12-10-2018 Vc3S01_A1601 ff0926bff74384301f0681adf8418e2c 564 Pfam PF02743 Cache domain 112 276 3.4E-15 T 12-10-2018 IPR033479 Double Cache domain 1 Vc3S01_A1601 ff0926bff74384301f0681adf8418e2c 564 SMART SM00304 314 366 5.9E-5 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Vc3S01_A1601 ff0926bff74384301f0681adf8418e2c 564 SMART SM00267 393 561 1.4E-57 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A1601 ff0926bff74384301f0681adf8418e2c 564 Gene3D G3DSA:3.30.70.270 389 561 9.0E-54 T 12-10-2018 Vc3S01_A1601 ff0926bff74384301f0681adf8418e2c 564 SUPERFAMILY SSF158472 315 363 2.62E-6 T 12-10-2018 Vc3S01_A0782 0067ec7f258a5cd007a3a8b4fe61dd5b 112 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 14 109 21.992 T 12-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 Vc3S01_A0782 0067ec7f258a5cd007a3a8b4fe61dd5b 112 SUPERFAMILY SSF55248 16 109 1.26E-33 T 12-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 Vc3S01_A0782 0067ec7f258a5cd007a3a8b4fe61dd5b 112 Gene3D G3DSA:3.30.1360.20 15 112 1.1E-32 T 12-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 Vc3S01_A0782 0067ec7f258a5cd007a3a8b4fe61dd5b 112 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 16 107 8.6E-32 T 12-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 Vc3S01_0985 c8fe2136555c04ef1c275e60a11795d8 229 SMART SM00507 144 203 7.9E-9 T 12-10-2018 IPR003615 HNH nuclease Vc3S01_0985 c8fe2136555c04ef1c275e60a11795d8 229 Pfam PF01844 HNH endonuclease 157 207 1.2E-12 T 12-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 Vc3S01_0985 c8fe2136555c04ef1c275e60a11795d8 229 Gene3D G3DSA:3.30.40.60 128 226 2.3E-5 T 12-10-2018 Vc3S01_0376 17906209147b897fd01226d53abdda2a 290 Gene3D G3DSA:3.90.550.10 1 278 9.0E-83 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Vc3S01_0376 17906209147b897fd01226d53abdda2a 290 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 2 263 3.2E-125 T 12-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 Vc3S01_0376 17906209147b897fd01226d53abdda2a 290 Pfam PF00483 Nucleotidyl transferase 9 265 6.9E-33 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Vc3S01_0376 17906209147b897fd01226d53abdda2a 290 SUPERFAMILY SSF53448 2 271 5.42E-65 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Vc3S01_0776 901306a526aaf3e3ad4c0b7ff3d8f05a 255 Gene3D G3DSA:3.30.2350.10 9 237 1.4E-60 T 12-10-2018 Vc3S01_0776 901306a526aaf3e3ad4c0b7ff3d8f05a 255 Pfam PF00849 RNA pseudouridylate synthase 24 183 3.0E-32 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Vc3S01_0776 901306a526aaf3e3ad4c0b7ff3d8f05a 255 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 63 77 - T 12-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Vc3S01_0776 901306a526aaf3e3ad4c0b7ff3d8f05a 255 SUPERFAMILY SSF55120 14 251 1.07E-63 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Vc3S01_1306 7705f3fcd55b3087ce0a8649e2d1059c 78 Pfam PF11665 Protein of unknown function (DUF3265) 51 78 6.0E-16 T 12-10-2018 IPR021681 Protein of unknown function DUF3265 Vc3S01_3211 ae39b00633be671e84937f1065914850 270 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 35 263 7.2E-46 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_3211 ae39b00633be671e84937f1065914850 270 ProSitePatterns PS00449 ATP synthase a subunit signature. 203 212 - T 12-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_3211 ae39b00633be671e84937f1065914850 270 SUPERFAMILY SSF81336 93 262 9.55E-50 T 12-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_3211 ae39b00633be671e84937f1065914850 270 Gene3D G3DSA:1.20.120.220 92 268 2.6E-66 T 12-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_3211 ae39b00633be671e84937f1065914850 270 Hamap MF_01393 ATP synthase subunit a [atpB]. 14 268 15.204 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_3211 ae39b00633be671e84937f1065914850 270 Pfam PF00119 ATP synthase A chain 44 262 1.3E-57 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_3211 ae39b00633be671e84937f1065914850 270 PRINTS PR00123 ATP synthase A subunit signature 200 222 2.3E-13 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_3211 ae39b00633be671e84937f1065914850 270 PRINTS PR00123 ATP synthase A subunit signature 101 117 2.3E-13 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_3211 ae39b00633be671e84937f1065914850 270 PRINTS PR00123 ATP synthase A subunit signature 248 263 2.3E-13 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_1801 910738efabe9fc12887c6d7fcb4ce088 368 TIGRFAM TIGR01883 PepT-like: peptidase T-like protein 8 362 9.8E-158 T 12-10-2018 IPR010162 Peptidase M20B, peptidase T-like Vc3S01_1801 910738efabe9fc12887c6d7fcb4ce088 368 PIRSF PIRSF001123 6 105 0.022 T 12-10-2018 IPR008007 Peptidase M42 Vc3S01_1801 910738efabe9fc12887c6d7fcb4ce088 368 PIRSF PIRSF001123 100 190 2.6E-4 T 12-10-2018 IPR008007 Peptidase M42 Vc3S01_1801 910738efabe9fc12887c6d7fcb4ce088 368 PIRSF PIRSF001123 284 368 1.6E-4 T 12-10-2018 IPR008007 Peptidase M42 Vc3S01_1801 910738efabe9fc12887c6d7fcb4ce088 368 SUPERFAMILY SSF53187 7 367 1.81E-58 T 12-10-2018 Vc3S01_1801 910738efabe9fc12887c6d7fcb4ce088 368 Gene3D G3DSA:3.40.630.10 16 362 9.9E-113 T 12-10-2018 Vc3S01_1801 910738efabe9fc12887c6d7fcb4ce088 368 Gene3D G3DSA:3.30.70.360 176 287 9.9E-113 T 12-10-2018 Vc3S01_1801 910738efabe9fc12887c6d7fcb4ce088 368 SUPERFAMILY SSF55031 177 289 4.58E-22 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Vc3S01_1801 910738efabe9fc12887c6d7fcb4ce088 368 Pfam PF07687 Peptidase dimerisation domain 182 273 5.2E-15 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain Vc3S01_1801 910738efabe9fc12887c6d7fcb4ce088 368 Pfam PF01546 Peptidase family M20/M25/M40 73 367 4.5E-18 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 Vc3S01_A1843 a95f0ea72910750fb4b2e8cc27173db9 338 Gene3D G3DSA:3.30.1950.10 50 131 7.9E-119 T 12-10-2018 Vc3S01_A1843 a95f0ea72910750fb4b2e8cc27173db9 338 Pfam PF02563 Polysaccharide biosynthesis/export protein 44 127 2.1E-26 T 12-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 Vc3S01_A1843 a95f0ea72910750fb4b2e8cc27173db9 338 Pfam PF10531 SLBB domain 135 184 3.6E-9 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Vc3S01_A1843 a95f0ea72910750fb4b2e8cc27173db9 338 Pfam PF10531 SLBB domain 218 272 4.6E-6 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Vc3S01_A1843 a95f0ea72910750fb4b2e8cc27173db9 338 Gene3D G3DSA:3.10.560.10 15 302 7.9E-119 T 12-10-2018 Vc3S01_A1843 a95f0ea72910750fb4b2e8cc27173db9 338 Gene3D G3DSA:1.20.5.70 305 338 8.3E-20 T 12-10-2018 Vc3S01_A1843 a95f0ea72910750fb4b2e8cc27173db9 338 Gene3D G3DSA:3.10.560.10 28 216 7.9E-119 T 12-10-2018 Vc3S01_2395 4b4ecf484cdc8869a8075b208ce24d8b 388 PIRSF PIRSF001554 1 388 3.6E-154 T 12-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Vc3S01_2395 4b4ecf484cdc8869a8075b208ce24d8b 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 1.9E-173 T 12-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Vc3S01_2395 4b4ecf484cdc8869a8075b208ce24d8b 388 Pfam PF08442 ATP-grasp domain 2 203 4.0E-79 T 12-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Vc3S01_2395 4b4ecf484cdc8869a8075b208ce24d8b 388 Gene3D G3DSA:3.30.470.20 1 234 6.1E-92 T 12-10-2018 Vc3S01_2395 4b4ecf484cdc8869a8075b208ce24d8b 388 SUPERFAMILY SSF52210 239 385 3.66E-54 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Vc3S01_2395 4b4ecf484cdc8869a8075b208ce24d8b 388 SUPERFAMILY SSF56059 1 238 4.95E-79 T 12-10-2018 Vc3S01_2395 4b4ecf484cdc8869a8075b208ce24d8b 388 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 43.164 T 12-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Vc3S01_2395 4b4ecf484cdc8869a8075b208ce24d8b 388 Gene3D G3DSA:3.30.1490.20 21 104 6.1E-92 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Vc3S01_2395 4b4ecf484cdc8869a8075b208ce24d8b 388 Pfam PF00549 CoA-ligase 262 382 9.3E-25 T 12-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Vc3S01_2395 4b4ecf484cdc8869a8075b208ce24d8b 388 Gene3D G3DSA:3.40.50.261 240 388 1.9E-56 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Vc3S01_2395 4b4ecf484cdc8869a8075b208ce24d8b 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 12-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Vc3S01_3010 2a589ff7847c86aa425a3672bf696f22 224 Gene3D G3DSA:1.10.150.20 45 87 3.3E-5 T 12-10-2018 Vc3S01_3010 2a589ff7847c86aa425a3672bf696f22 224 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 224 1.4E-77 T 12-10-2018 IPR001405 Uncharacterised protein family UPF0758 Vc3S01_3010 2a589ff7847c86aa425a3672bf696f22 224 SUPERFAMILY SSF47781 17 91 2.67E-11 T 12-10-2018 IPR010994 RuvA domain 2-like Vc3S01_3010 2a589ff7847c86aa425a3672bf696f22 224 SUPERFAMILY SSF102712 134 190 8.24E-5 T 12-10-2018 Vc3S01_3010 2a589ff7847c86aa425a3672bf696f22 224 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 12-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site Vc3S01_3010 2a589ff7847c86aa425a3672bf696f22 224 Pfam PF04002 RadC-like JAB domain 104 222 5.6E-45 T 12-10-2018 IPR025657 RadC-like JAB domain Vc3S01_3010 2a589ff7847c86aa425a3672bf696f22 224 Gene3D G3DSA:3.40.140.10 101 224 2.5E-43 T 12-10-2018 Vc3S01_1882 a00b29546114ac4e25ec12ad4a348f32 269 Gene3D G3DSA:1.10.260.40 2 70 6.2E-6 T 12-10-2018 Vc3S01_1882 a00b29546114ac4e25ec12ad4a348f32 269 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 13 66 8.2E-8 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Vc3S01_1882 a00b29546114ac4e25ec12ad4a348f32 269 SUPERFAMILY SSF47413 5 70 1.06E-9 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Vc3S01_1882 a00b29546114ac4e25ec12ad4a348f32 269 SMART SM00530 12 66 0.0013 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Vc3S01_A1828 f5745cf9fd73cb0e6cdb3b36bd7d7610 388 Gene3D G3DSA:3.40.710.10 19 276 3.6E-90 T 12-10-2018 Vc3S01_A1828 f5745cf9fd73cb0e6cdb3b36bd7d7610 388 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 27 257 2.4E-85 T 12-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 Vc3S01_A1828 f5745cf9fd73cb0e6cdb3b36bd7d7610 388 SUPERFAMILY SSF56601 6 278 2.13E-83 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Vc3S01_A1828 f5745cf9fd73cb0e6cdb3b36bd7d7610 388 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 61 72 3.3E-17 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Vc3S01_A1828 f5745cf9fd73cb0e6cdb3b36bd7d7610 388 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 117 134 3.3E-17 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Vc3S01_A1828 f5745cf9fd73cb0e6cdb3b36bd7d7610 388 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 144 157 3.3E-17 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Vc3S01_A1828 f5745cf9fd73cb0e6cdb3b36bd7d7610 388 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 278 368 1.4E-20 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Vc3S01_A1828 f5745cf9fd73cb0e6cdb3b36bd7d7610 388 SMART SM00936 278 368 2.3E-28 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Vc3S01_A1828 f5745cf9fd73cb0e6cdb3b36bd7d7610 388 SUPERFAMILY SSF69189 278 370 3.92E-23 T 12-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Vc3S01_A1828 f5745cf9fd73cb0e6cdb3b36bd7d7610 388 Gene3D G3DSA:2.60.410.10 278 368 7.3E-27 T 12-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Vc3S01_2938 4ca440efbe14af193e53dc561e300836 92 PIRSF PIRSF002144 1 92 2.0E-31 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_2938 4ca440efbe14af193e53dc561e300836 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 12-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_2938 4ca440efbe14af193e53dc561e300836 92 Pfam PF00203 Ribosomal protein S19 3 83 2.7E-36 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_2938 4ca440efbe14af193e53dc561e300836 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 7.3E-25 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_2938 4ca440efbe14af193e53dc561e300836 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 7.3E-25 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_2938 4ca440efbe14af193e53dc561e300836 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 7.3E-25 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_2938 4ca440efbe14af193e53dc561e300836 92 SUPERFAMILY SSF54570 3 84 2.49E-35 T 12-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_2938 4ca440efbe14af193e53dc561e300836 92 Gene3D G3DSA:3.30.860.10 1 92 1.0E-43 T 12-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_2938 4ca440efbe14af193e53dc561e300836 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.68 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_2938 4ca440efbe14af193e53dc561e300836 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 2.3E-46 T 12-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 Vc3S01_A1014 04e490dd147890308aa311a464b93f93 231 SUPERFAMILY SSF46689 130 179 8.96E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_A1014 04e490dd147890308aa311a464b93f93 231 SMART SM00342 145 228 1.8E-27 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_A1014 04e490dd147890308aa311a464b93f93 231 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 180 224 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Vc3S01_A1014 04e490dd147890308aa311a464b93f93 231 Gene3D G3DSA:1.10.10.60 179 231 1.2E-14 T 12-10-2018 Vc3S01_A1014 04e490dd147890308aa311a464b93f93 231 SUPERFAMILY SSF46689 181 230 8.51E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_A1014 04e490dd147890308aa311a464b93f93 231 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 197 212 2.7E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Vc3S01_A1014 04e490dd147890308aa311a464b93f93 231 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 212 228 2.7E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Vc3S01_A1014 04e490dd147890308aa311a464b93f93 231 Gene3D G3DSA:1.10.10.60 129 178 1.0E-15 T 12-10-2018 Vc3S01_A1014 04e490dd147890308aa311a464b93f93 231 Pfam PF12833 Helix-turn-helix domain 151 229 4.8E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_1557 2d6ea3026a3cc504f3aef67330509555 323 Gene3D G3DSA:3.40.190.10 31 320 2.3E-110 T 12-10-2018 Vc3S01_1557 2d6ea3026a3cc504f3aef67330509555 323 SUPERFAMILY SSF53850 27 322 6.11E-91 T 12-10-2018 Vc3S01_1557 2d6ea3026a3cc504f3aef67330509555 323 Pfam PF16868 NMT1-like family 31 320 3.2E-98 T 12-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family Vc3S01_1557 2d6ea3026a3cc504f3aef67330509555 323 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 4 320 5.9E-120 T 12-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family Vc3S01_1557 2d6ea3026a3cc504f3aef67330509555 323 Gene3D G3DSA:3.40.190.10 118 256 2.3E-110 T 12-10-2018 Vc3S01_A1878 c5fdb3bc968393a126af136d314bbdf7 328 SUPERFAMILY SSF53613 11 324 3.43E-66 T 12-10-2018 IPR029056 Ribokinase-like Vc3S01_A1878 c5fdb3bc968393a126af136d314bbdf7 328 Pfam PF00294 pfkB family carbohydrate kinase 15 316 7.2E-53 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB Vc3S01_A1878 c5fdb3bc968393a126af136d314bbdf7 328 TIGRFAM TIGR04382 myo_inos_iolC_N: 5-dehydro-2-deoxygluconokinase 12 324 3.0E-112 T 12-10-2018 IPR030830 5-Dehydro-2-deoxygluconokinase KEGG: 00562+2.7.1.92 Vc3S01_A1878 c5fdb3bc968393a126af136d314bbdf7 328 Gene3D G3DSA:3.40.1190.20 15 303 2.2E-81 T 12-10-2018 IPR029056 Ribokinase-like Vc3S01_A1878 c5fdb3bc968393a126af136d314bbdf7 328 Gene3D G3DSA:2.20.150.10 20 115 2.2E-81 T 12-10-2018 IPR023314 5-Dehydro-2-deoxygluconokinase-like superfamily KEGG: 00562+2.7.1.92 Vc3S01_A1878 c5fdb3bc968393a126af136d314bbdf7 328 Hamap MF_01668 5-dehydro-2-deoxygluconokinase [iolC]. 8 328 50.986 T 12-10-2018 IPR022841 5-dehydro-2-deoxygluconokinase, Firmicutes GO:0016310|GO:0047590 KEGG: 00562+2.7.1.92 Vc3S01_A0205 00b9ec26ae65c87f8e932015c58c1ff1 160 Pfam PF03734 L,D-transpeptidase catalytic domain 24 158 2.2E-19 T 12-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 Vc3S01_A0205 00b9ec26ae65c87f8e932015c58c1ff1 160 Gene3D G3DSA:2.40.440.10 14 160 1.7E-18 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Vc3S01_A0205 00b9ec26ae65c87f8e932015c58c1ff1 160 SUPERFAMILY SSF141523 24 158 3.66E-24 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Vc3S01_2327 09a89478f3b805a193302ede35a7c4c3 445 Gene3D G3DSA:1.10.8.60 315 379 4.2E-20 T 12-10-2018 Vc3S01_2327 09a89478f3b805a193302ede35a7c4c3 445 Pfam PF02954 Bacterial regulatory protein, Fis family 397 437 4.2E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Vc3S01_2327 09a89478f3b805a193302ede35a7c4c3 445 Pfam PF00072 Response regulator receiver domain 4 114 1.5E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_2327 09a89478f3b805a193302ede35a7c4c3 445 Gene3D G3DSA:3.40.50.2300 1 129 1.9E-35 T 12-10-2018 Vc3S01_2327 09a89478f3b805a193302ede35a7c4c3 445 SMART SM00382 164 307 1.1E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_2327 09a89478f3b805a193302ede35a7c4c3 445 Pfam PF00158 Sigma-54 interaction domain 144 310 1.1E-69 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Vc3S01_2327 09a89478f3b805a193302ede35a7c4c3 445 SMART SM00448 2 114 1.3E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_2327 09a89478f3b805a193302ede35a7c4c3 445 SUPERFAMILY SSF52540 144 374 1.25E-67 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2327 09a89478f3b805a193302ede35a7c4c3 445 Gene3D G3DSA:3.40.50.300 130 314 3.1E-61 T 12-10-2018 Vc3S01_2327 09a89478f3b805a193302ede35a7c4c3 445 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 357 366 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Vc3S01_2327 09a89478f3b805a193302ede35a7c4c3 445 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 168 181 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Vc3S01_2327 09a89478f3b805a193302ede35a7c4c3 445 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 230 245 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Vc3S01_2327 09a89478f3b805a193302ede35a7c4c3 445 SUPERFAMILY SSF46689 390 440 1.16E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_2327 09a89478f3b805a193302ede35a7c4c3 445 Gene3D G3DSA:1.10.10.60 383 442 3.0E-14 T 12-10-2018 Vc3S01_2327 09a89478f3b805a193302ede35a7c4c3 445 SUPERFAMILY SSF52172 2 188 2.13E-37 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_0652 655e65bf7c3bcdcdf7dc9e8a766fdee2 442 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 67 3.6E-20 T 12-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 Vc3S01_0652 655e65bf7c3bcdcdf7dc9e8a766fdee2 442 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 350 423 3.1E-23 T 12-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Vc3S01_0652 655e65bf7c3bcdcdf7dc9e8a766fdee2 442 SMART SM00941 350 424 4.1E-28 T 12-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Vc3S01_0652 655e65bf7c3bcdcdf7dc9e8a766fdee2 442 SUPERFAMILY SSF54680 337 437 1.1E-28 T 12-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Vc3S01_0652 655e65bf7c3bcdcdf7dc9e8a766fdee2 442 TIGRFAM TIGR02643 T_phosphoryl: thymidine phosphorylase 3 427 1.0E-213 T 12-10-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 Vc3S01_0652 655e65bf7c3bcdcdf7dc9e8a766fdee2 442 Pfam PF00591 Glycosyl transferase family, a/b domain 80 309 2.1E-48 T 12-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Vc3S01_0652 655e65bf7c3bcdcdf7dc9e8a766fdee2 442 Gene3D G3DSA:1.20.970.10 7 195 2.0E-127 T 12-10-2018 Vc3S01_0652 655e65bf7c3bcdcdf7dc9e8a766fdee2 442 Gene3D G3DSA:3.40.1030.10 70 322 2.0E-127 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Vc3S01_0652 655e65bf7c3bcdcdf7dc9e8a766fdee2 442 SUPERFAMILY SSF52418 73 334 1.03E-88 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Vc3S01_0652 655e65bf7c3bcdcdf7dc9e8a766fdee2 442 SUPERFAMILY SSF47648 2 70 6.67E-21 T 12-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Vc3S01_0652 655e65bf7c3bcdcdf7dc9e8a766fdee2 442 Gene3D G3DSA:3.90.1170.30 337 432 2.0E-29 T 12-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Vc3S01_0652 655e65bf7c3bcdcdf7dc9e8a766fdee2 442 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 5 423 5.5E-160 T 12-10-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 Vc3S01_0652 655e65bf7c3bcdcdf7dc9e8a766fdee2 442 PIRSF PIRSF000478 1 438 1.6E-148 T 12-10-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Vc3S01_0652 655e65bf7c3bcdcdf7dc9e8a766fdee2 442 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 113 128 - T 12-10-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Vc3S01_0652 655e65bf7c3bcdcdf7dc9e8a766fdee2 442 Hamap MF_01628 Thymidine phosphorylase [deoA]. 2 437 45.529 T 12-10-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 Vc3S01_0826 0b0d704a68a7f396fb1b0c823b8d10fd 180 Gene3D G3DSA:3.30.70.260 87 180 1.1E-40 T 12-10-2018 Vc3S01_0826 0b0d704a68a7f396fb1b0c823b8d10fd 180 Gene3D G3DSA:3.30.70.260 1 85 6.8E-25 T 12-10-2018 Vc3S01_0826 0b0d704a68a7f396fb1b0c823b8d10fd 180 PIRSF PIRSF028103 1 178 1.1E-67 T 12-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 Vc3S01_0826 0b0d704a68a7f396fb1b0c823b8d10fd 180 Pfam PF13740 ACT domain 3 78 4.7E-23 T 12-10-2018 Vc3S01_0826 0b0d704a68a7f396fb1b0c823b8d10fd 180 SUPERFAMILY SSF55021 90 176 9.92E-21 T 12-10-2018 Vc3S01_0826 0b0d704a68a7f396fb1b0c823b8d10fd 180 SUPERFAMILY SSF55021 1 82 6.49E-18 T 12-10-2018 Vc3S01_A0675 44d2559e5a83692998ed26cf695736a6 179 Pfam PF06252 Protein of unknown function (DUF1018) 19 135 9.3E-35 T 12-10-2018 IPR009363 Bacteriophage Mu, Gp16 Vc3S01_2729 b19f12af085adc1ebde6eee4c510dd88 305 Gene3D G3DSA:1.10.443.10 118 299 1.3E-72 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Vc3S01_2729 b19f12af085adc1ebde6eee4c510dd88 305 SUPERFAMILY SSF56349 113 303 5.59E-57 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Vc3S01_2729 b19f12af085adc1ebde6eee4c510dd88 305 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 11 305 60.026 T 12-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 Vc3S01_2729 b19f12af085adc1ebde6eee4c510dd88 305 Gene3D G3DSA:1.10.150.130 10 105 1.5E-21 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal Vc3S01_2729 b19f12af085adc1ebde6eee4c510dd88 305 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 13 305 55.233 T 12-10-2018 IPR023009 Tyrosine recombinase XerC/XerD Vc3S01_2729 b19f12af085adc1ebde6eee4c510dd88 305 SUPERFAMILY SSF47823 11 107 1.67E-33 T 12-10-2018 Vc3S01_2729 b19f12af085adc1ebde6eee4c510dd88 305 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 16 305 1.3E-114 T 12-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 Vc3S01_2729 b19f12af085adc1ebde6eee4c510dd88 305 Pfam PF00589 Phage integrase family 120 291 7.3E-53 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Vc3S01_2729 b19f12af085adc1ebde6eee4c510dd88 305 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 15 97 3.7E-18 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 Vc3S01_0547 c9a127feb232e145b0df606cc49012af 522 SUPERFAMILY SSF55931 5 513 9.16E-201 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Vc3S01_0547 c9a127feb232e145b0df606cc49012af 522 Gene3D G3DSA:3.30.590.20 17 522 1.1E-191 T 12-10-2018 Vc3S01_0547 c9a127feb232e145b0df606cc49012af 522 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 8 515 1.6E-207 T 12-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 Vc3S01_0547 c9a127feb232e145b0df606cc49012af 522 Pfam PF04262 Glutamate-cysteine ligase 13 378 2.5E-167 T 12-10-2018 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 Vc3S01_0547 c9a127feb232e145b0df606cc49012af 522 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 522 221.91 T 12-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 Vc3S01_1645 6c61994d02687ea240afc52b0a356e43 103 Pfam PF12321 Protein of unknown function (DUF3634) 2 100 4.5E-42 T 12-10-2018 IPR022090 Protein of unknown function DUF3634 Vc3S01_1513 b91b696b10e81c9d79a5fe7a45d7d8f6 116 Pfam PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit 26 111 7.0E-37 T 12-10-2018 IPR011986 Extradiol ring-cleavage dioxygenase LigAB, LigA subunit Vc3S01_1513 b91b696b10e81c9d79a5fe7a45d7d8f6 116 Gene3D G3DSA:1.10.700.10 2 116 2.2E-46 T 12-10-2018 IPR036622 Dioxygenase LigAB, LigA subunit superfamily Vc3S01_1513 b91b696b10e81c9d79a5fe7a45d7d8f6 116 SUPERFAMILY SSF48076 7 115 1.06E-41 T 12-10-2018 IPR036622 Dioxygenase LigAB, LigA subunit superfamily Vc3S01_A1021 6fdcb668e69f5403f2cd7d1921cfe92b 151 Pfam PF00583 Acetyltransferase (GNAT) family 34 140 4.6E-19 T 12-10-2018 IPR000182 GNAT domain Vc3S01_A1021 6fdcb668e69f5403f2cd7d1921cfe92b 151 SUPERFAMILY SSF55729 4 145 3.82E-27 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_A1021 6fdcb668e69f5403f2cd7d1921cfe92b 151 Gene3D G3DSA:3.40.630.30 1 151 5.1E-38 T 12-10-2018 Vc3S01_2290 ac3f8f03d4b0372e777cfa2a04886ece 95 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 2 78 9.7E-24 T 12-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 Vc3S01_2290 ac3f8f03d4b0372e777cfa2a04886ece 95 Gene3D G3DSA:1.10.10.10 1 95 1.8E-38 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_2290 ac3f8f03d4b0372e777cfa2a04886ece 95 SUPERFAMILY SSF46767 2 79 1.03E-23 T 12-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 Vc3S01_2839 bd402e7cb4a39bd4d7e985cfed783e85 214 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 59 184 2.6E-14 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Vc3S01_2839 bd402e7cb4a39bd4d7e985cfed783e85 214 Gene3D G3DSA:3.40.50.1000 5 189 9.5E-48 T 12-10-2018 IPR023214 HAD superfamily Vc3S01_2839 bd402e7cb4a39bd4d7e985cfed783e85 214 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 128 144 1.6E-10 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Vc3S01_2839 bd402e7cb4a39bd4d7e985cfed783e85 214 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 97 110 1.6E-10 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Vc3S01_2839 bd402e7cb4a39bd4d7e985cfed783e85 214 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 1.6E-10 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Vc3S01_2839 bd402e7cb4a39bd4d7e985cfed783e85 214 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 146 166 1.6E-10 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Vc3S01_2839 bd402e7cb4a39bd4d7e985cfed783e85 214 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 184 2.8E-28 T 12-10-2018 Vc3S01_2839 bd402e7cb4a39bd4d7e985cfed783e85 214 Gene3D G3DSA:1.10.150.240 16 84 9.5E-48 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Vc3S01_2839 bd402e7cb4a39bd4d7e985cfed783e85 214 SUPERFAMILY SSF56784 1 212 9.75E-43 T 12-10-2018 IPR036412 HAD-like superfamily Vc3S01_0932 b6322e19213531f7e8e59a5acbcd491c 218 Pfam PF08348 YheO-like PAS domain 14 119 2.0E-32 T 12-10-2018 IPR013559 YheO-like Vc3S01_0932 b6322e19213531f7e8e59a5acbcd491c 218 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 12 114 7.0E-52 T 12-10-2018 IPR013559 YheO-like Vc3S01_0932 b6322e19213531f7e8e59a5acbcd491c 218 Pfam PF13309 HTH domain 156 213 6.9E-15 T 12-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain Vc3S01_1741 fbc66059911aa5d21f81afb01e8ca11a 512 SMART SM00267 327 500 5.0E-34 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_1741 fbc66059911aa5d21f81afb01e8ca11a 512 Pfam PF02743 Cache domain 59 265 2.9E-15 T 12-10-2018 IPR033479 Double Cache domain 1 Vc3S01_1741 fbc66059911aa5d21f81afb01e8ca11a 512 SUPERFAMILY SSF103190 118 179 3.92E-5 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Vc3S01_1741 fbc66059911aa5d21f81afb01e8ca11a 512 Gene3D G3DSA:3.30.70.270 345 507 3.0E-38 T 12-10-2018 Vc3S01_1741 fbc66059911aa5d21f81afb01e8ca11a 512 SUPERFAMILY SSF55073 347 501 7.45E-37 T 12-10-2018 IPR029787 Nucleotide cyclase Vc3S01_1741 fbc66059911aa5d21f81afb01e8ca11a 512 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 363 498 9.9E-31 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_1741 fbc66059911aa5d21f81afb01e8ca11a 512 Pfam PF00990 Diguanylate cyclase, GGDEF domain 348 495 2.1E-30 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_1741 fbc66059911aa5d21f81afb01e8ca11a 512 Gene3D G3DSA:3.30.450.20 84 171 1.4E-10 T 12-10-2018 Vc3S01_1516 4e3966e2adadd0f5dae0faa1628857cb 243 SUPERFAMILY SSF102588 3 241 1.7E-48 T 12-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 Vc3S01_1516 4e3966e2adadd0f5dae0faa1628857cb 243 Gene3D G3DSA:3.40.50.10320 3 243 4.0E-85 T 12-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 Vc3S01_1516 4e3966e2adadd0f5dae0faa1628857cb 243 Pfam PF02585 GlcNAc-PI de-N-acetylase 7 135 5.8E-22 T 12-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 Vc3S01_1688 0b180f9ffc89e5df9896d5baed485811 530 SUPERFAMILY SSF52540 7 237 1.05E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_1688 0b180f9ffc89e5df9896d5baed485811 530 Gene3D G3DSA:3.40.50.300 282 529 1.1E-50 T 12-10-2018 Vc3S01_1688 0b180f9ffc89e5df9896d5baed485811 530 Pfam PF00005 ABC transporter 18 184 2.0E-20 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_1688 0b180f9ffc89e5df9896d5baed485811 530 SUPERFAMILY SSF52540 334 517 1.43E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_1688 0b180f9ffc89e5df9896d5baed485811 530 Pfam PF00005 ABC transporter 336 466 1.7E-21 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_1688 0b180f9ffc89e5df9896d5baed485811 530 Pfam PF12848 ABC transporter 224 309 1.4E-21 T 12-10-2018 IPR032781 ABC-transporter extension domain Vc3S01_1688 0b180f9ffc89e5df9896d5baed485811 530 Gene3D G3DSA:3.40.50.300 2 281 1.3E-56 T 12-10-2018 Vc3S01_1688 0b180f9ffc89e5df9896d5baed485811 530 SMART SM00382 26 238 9.8E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_1688 0b180f9ffc89e5df9896d5baed485811 530 SMART SM00382 343 511 1.2E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_1231 94db2735bc2159057c7c70383ebb774a 200 TIGRFAM TIGR03146 cyt_nit_nrfB: cytochrome c nitrite reductase, pentaheme subunit 42 188 5.7E-62 T 12-10-2018 IPR017564 Cytochrome c nitrite reductase, pentahaem subunit GO:0006807|GO:0020037|GO:0042597 Vc3S01_1231 94db2735bc2159057c7c70383ebb774a 200 SUPERFAMILY SSF48695 6 188 2.49E-27 T 12-10-2018 IPR036280 Multiheme cytochrome superfamily Vc3S01_1231 94db2735bc2159057c7c70383ebb774a 200 Gene3D G3DSA:3.90.10.10 39 141 2.8E-6 T 12-10-2018 Vc3S01_1231 94db2735bc2159057c7c70383ebb774a 200 Gene3D G3DSA:3.90.10.10 142 197 3.1E-5 T 12-10-2018 Vc3S01_1231 94db2735bc2159057c7c70383ebb774a 200 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 152 188 1.0E-4 T 12-10-2018 IPR010177 Doubled CXXCH motif Vc3S01_0297 1448db9cfd251e8f41300e249d278b2a 158 TIGRFAM TIGR00754 bfr: bacterioferritin 1 157 4.7E-82 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Vc3S01_0297 1448db9cfd251e8f41300e249d278b2a 158 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Vc3S01_0297 1448db9cfd251e8f41300e249d278b2a 158 PRINTS PR00601 Bacterioferritin signature 23 43 1.5E-72 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Vc3S01_0297 1448db9cfd251e8f41300e249d278b2a 158 PRINTS PR00601 Bacterioferritin signature 44 64 1.5E-72 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Vc3S01_0297 1448db9cfd251e8f41300e249d278b2a 158 PRINTS PR00601 Bacterioferritin signature 107 127 1.5E-72 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Vc3S01_0297 1448db9cfd251e8f41300e249d278b2a 158 PRINTS PR00601 Bacterioferritin signature 3 22 1.5E-72 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Vc3S01_0297 1448db9cfd251e8f41300e249d278b2a 158 PRINTS PR00601 Bacterioferritin signature 65 85 1.5E-72 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Vc3S01_0297 1448db9cfd251e8f41300e249d278b2a 158 PRINTS PR00601 Bacterioferritin signature 86 106 1.5E-72 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Vc3S01_0297 1448db9cfd251e8f41300e249d278b2a 158 PRINTS PR00601 Bacterioferritin signature 128 149 1.5E-72 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Vc3S01_0297 1448db9cfd251e8f41300e249d278b2a 158 PIRSF PIRSF002560 1 157 5.2E-73 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Vc3S01_0297 1448db9cfd251e8f41300e249d278b2a 158 Pfam PF00210 Ferritin-like domain 8 143 1.5E-40 T 12-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 Vc3S01_0297 1448db9cfd251e8f41300e249d278b2a 158 Gene3D G3DSA:1.20.1260.10 1 158 1.1E-71 T 12-10-2018 IPR012347 Ferritin-like Vc3S01_0297 1448db9cfd251e8f41300e249d278b2a 158 SUPERFAMILY SSF47240 1 153 1.25E-55 T 12-10-2018 IPR009078 Ferritin-like superfamily Vc3S01_0391 6042939eecc3a9a0ce4bf1fd53d68230 161 SUPERFAMILY SSF54523 10 133 1.26E-9 T 12-10-2018 Vc3S01_0391 6042939eecc3a9a0ce4bf1fd53d68230 161 Gene3D G3DSA:3.30.700.10 10 160 8.9E-6 T 12-10-2018 Vc3S01_0391 6042939eecc3a9a0ce4bf1fd53d68230 161 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 30 1.6E-5 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Vc3S01_0391 6042939eecc3a9a0ce4bf1fd53d68230 161 Pfam PF07963 Prokaryotic N-terminal methylation motif 6 29 5.2E-5 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Vc3S01_3199 8dc592f5e4c27b8268105e5650d0e99c 301 SUPERFAMILY SSF53850 89 290 1.99E-23 T 12-10-2018 Vc3S01_3199 8dc592f5e4c27b8268105e5650d0e99c 301 Gene3D G3DSA:1.10.10.10 1 89 1.1E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_3199 8dc592f5e4c27b8268105e5650d0e99c 301 Gene3D G3DSA:3.40.190.290 93 293 4.1E-12 T 12-10-2018 Vc3S01_3199 8dc592f5e4c27b8268105e5650d0e99c 301 SUPERFAMILY SSF46785 5 86 4.08E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_3199 8dc592f5e4c27b8268105e5650d0e99c 301 Pfam PF03466 LysR substrate binding domain 89 289 5.3E-20 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_3199 8dc592f5e4c27b8268105e5650d0e99c 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 3.5E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A0394 de1ce950b393df40132f938d32fc35aa 309 Gene3D G3DSA:3.40.190.10 98 298 2.4E-58 T 12-10-2018 Vc3S01_A0394 de1ce950b393df40132f938d32fc35aa 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 69 1.1E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A0394 de1ce950b393df40132f938d32fc35aa 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 3.7E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A0394 de1ce950b393df40132f938d32fc35aa 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 3.7E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A0394 de1ce950b393df40132f938d32fc35aa 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 3.7E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A0394 de1ce950b393df40132f938d32fc35aa 309 Gene3D G3DSA:1.10.10.10 9 95 2.1E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A0394 de1ce950b393df40132f938d32fc35aa 309 SUPERFAMILY SSF46785 10 116 1.59E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A0394 de1ce950b393df40132f938d32fc35aa 309 Gene3D G3DSA:3.40.190.10 169 270 2.4E-58 T 12-10-2018 Vc3S01_A0394 de1ce950b393df40132f938d32fc35aa 309 SUPERFAMILY SSF53850 95 301 7.6E-39 T 12-10-2018 Vc3S01_A0394 de1ce950b393df40132f938d32fc35aa 309 Pfam PF03466 LysR substrate binding domain 94 301 4.1E-38 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_2742 28a7acfa55c215fa5f72668686565c65 219 Pfam PF03358 NADPH-dependent FMN reductase 1 150 5.5E-24 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 Vc3S01_2742 28a7acfa55c215fa5f72668686565c65 219 Gene3D G3DSA:3.40.50.360 1 199 2.1E-36 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Vc3S01_2742 28a7acfa55c215fa5f72668686565c65 219 SUPERFAMILY SSF52218 1 183 9.19E-34 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Vc3S01_0743 c3adf4f0dde65260fcc759bf825f68d3 181 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 22 178 2.9E-43 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Vc3S01_0743 c3adf4f0dde65260fcc759bf825f68d3 181 Gene3D G3DSA:2.40.100.10 18 181 1.2E-58 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily Vc3S01_0743 c3adf4f0dde65260fcc759bf825f68d3 181 SUPERFAMILY SSF50891 18 180 1.61E-52 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily Vc3S01_0743 c3adf4f0dde65260fcc759bf825f68d3 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 5.8E-11 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Vc3S01_0743 c3adf4f0dde65260fcc759bf825f68d3 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 61 73 5.8E-11 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Vc3S01_0743 c3adf4f0dde65260fcc759bf825f68d3 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 35 50 5.8E-11 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Vc3S01_0743 c3adf4f0dde65260fcc759bf825f68d3 181 PIRSF PIRSF001467 6 181 1.5E-24 T 12-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 Vc3S01_0743 c3adf4f0dde65260fcc759bf825f68d3 181 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 56 73 - T 12-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 Vc3S01_1272 90c1dc431388ef0628acb5b752111cb8 155 Pfam PF00583 Acetyltransferase (GNAT) family 24 133 1.4E-6 T 12-10-2018 IPR000182 GNAT domain Vc3S01_1272 90c1dc431388ef0628acb5b752111cb8 155 Gene3D G3DSA:3.40.630.30 2 153 3.5E-14 T 12-10-2018 Vc3S01_1272 90c1dc431388ef0628acb5b752111cb8 155 SUPERFAMILY SSF55729 1 135 7.8E-14 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_1225 edb1029288752af809126cd011121661 760 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 142 219 5.3E-11 T 12-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Vc3S01_1225 edb1029288752af809126cd011121661 760 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 599 621 - T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Vc3S01_1225 edb1029288752af809126cd011121661 760 Pfam PF03477 ATP cone domain 6 92 1.5E-18 T 12-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 Vc3S01_1225 edb1029288752af809126cd011121661 760 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 735 1.0E-174 T 12-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Vc3S01_1225 edb1029288752af809126cd011121661 760 Gene3D G3DSA:3.20.70.20 78 742 3.7E-156 T 12-10-2018 Vc3S01_1225 edb1029288752af809126cd011121661 760 SUPERFAMILY SSF48168 10 221 3.66E-74 T 12-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Vc3S01_1225 edb1029288752af809126cd011121661 760 Pfam PF02867 Ribonucleotide reductase, barrel domain 223 731 1.9E-120 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Vc3S01_1225 edb1029288752af809126cd011121661 760 SUPERFAMILY SSF51998 222 738 1.34E-164 T 12-10-2018 Vc3S01_1225 edb1029288752af809126cd011121661 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 496 1.4E-37 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Vc3S01_1225 edb1029288752af809126cd011121661 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 562 1.4E-37 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Vc3S01_1225 edb1029288752af809126cd011121661 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 1.4E-37 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Vc3S01_1225 edb1029288752af809126cd011121661 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 444 1.4E-37 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Vc3S01_1225 edb1029288752af809126cd011121661 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 533 1.4E-37 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Vc3S01_1225 edb1029288752af809126cd011121661 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 298 317 1.4E-37 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Vc3S01_2865 8875d850434e8548a8b689b75677c3e5 333 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 7 332 36.146 T 12-10-2018 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GO:0042823|GO:0050570 KEGG: 00750+1.1.1.262 Vc3S01_2865 8875d850434e8548a8b689b75677c3e5 333 Gene3D G3DSA:3.40.718.10 2 333 8.0E-121 T 12-10-2018 Vc3S01_2865 8875d850434e8548a8b689b75677c3e5 333 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 9 328 2.8E-126 T 12-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 Vc3S01_2865 8875d850434e8548a8b689b75677c3e5 333 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 36 325 1.1E-105 T 12-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 Vc3S01_2865 8875d850434e8548a8b689b75677c3e5 333 SUPERFAMILY SSF53659 7 331 4.8E-110 T 12-10-2018 Vc3S01_1042 068fe0f78bbc3262ad0a60af48e85e5f 270 Gene3D G3DSA:1.10.10.10 1 100 2.5E-13 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_1042 068fe0f78bbc3262ad0a60af48e85e5f 270 SUPERFAMILY SSF46894 3 98 7.09E-13 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Vc3S01_1042 068fe0f78bbc3262ad0a60af48e85e5f 270 SMART SM00862 22 97 1.9E-7 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Vc3S01_1042 068fe0f78bbc3262ad0a60af48e85e5f 270 Pfam PF00486 Transcriptional regulatory protein, C terminal 34 97 2.6E-12 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Vc3S01_1927 e8ef724365235538fbbe3014118baf24 595 SMART SM00382 375 594 4.7E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_1927 e8ef724365235538fbbe3014118baf24 595 SUPERFAMILY SSF90123 5 330 3.79E-57 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Vc3S01_1927 e8ef724365235538fbbe3014118baf24 595 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 20 554 1.3E-177 T 12-10-2018 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 Vc3S01_1927 e8ef724365235538fbbe3014118baf24 595 SUPERFAMILY SSF52540 347 580 4.7E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_1927 e8ef724365235538fbbe3014118baf24 595 Pfam PF00005 ABC transporter 369 512 1.5E-26 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_1927 e8ef724365235538fbbe3014118baf24 595 Gene3D G3DSA:1.20.1560.10 1 334 7.8E-52 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Vc3S01_1927 e8ef724365235538fbbe3014118baf24 595 Pfam PF00664 ABC transporter transmembrane region 25 292 1.1E-43 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Vc3S01_1927 e8ef724365235538fbbe3014118baf24 595 ProSitePatterns PS00211 ABC transporters family signature. 484 498 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_1927 e8ef724365235538fbbe3014118baf24 595 Gene3D G3DSA:3.40.50.300 341 593 1.2E-64 T 12-10-2018 Vc3S01_1796 67c45afc7dafa0d01d655d7f734a2305 222 Gene3D G3DSA:1.20.1050.10 93 222 1.1E-43 T 12-10-2018 Vc3S01_1796 67c45afc7dafa0d01d655d7f734a2305 222 Pfam PF13417 Glutathione S-transferase, N-terminal domain 7 84 5.4E-15 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Vc3S01_1796 67c45afc7dafa0d01d655d7f734a2305 222 SUPERFAMILY SSF47616 88 219 1.89E-23 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Vc3S01_1796 67c45afc7dafa0d01d655d7f734a2305 222 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 6 220 3.1E-81 T 12-10-2018 IPR005955 Glutathione S-transferases, class Zeta GO:0003824|GO:0005737|GO:0009072 Reactome: R-HSA-156590|Reactome: R-HSA-204174|Reactome: R-HSA-71182 Vc3S01_1796 67c45afc7dafa0d01d655d7f734a2305 222 Gene3D G3DSA:3.40.30.10 2 92 6.8E-25 T 12-10-2018 Vc3S01_1796 67c45afc7dafa0d01d655d7f734a2305 222 SUPERFAMILY SSF52833 5 90 1.21E-21 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Vc3S01_1062 53a10b5ab8e7b7884de3e4d4248e4816 424 Pfam PF13194 Domain of unknown function (DUF4010) 189 397 4.9E-65 T 12-10-2018 IPR025105 Domain of unknown function DUF4010 Vc3S01_1062 53a10b5ab8e7b7884de3e4d4248e4816 424 Pfam PF02308 MgtC family 16 141 1.1E-17 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Vc3S01_A0381 8b6971ef3799dc483e3add0ac167313b 822 Pfam PF13954 PapC N-terminal domain 26 168 5.3E-26 T 12-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 Vc3S01_A0381 8b6971ef3799dc483e3add0ac167313b 822 Gene3D G3DSA:2.60.40.2610 650 740 7.8E-29 T 12-10-2018 Vc3S01_A0381 8b6971ef3799dc483e3add0ac167313b 822 Gene3D G3DSA:2.60.40.3110 252 341 1.0E-31 T 12-10-2018 Vc3S01_A0381 8b6971ef3799dc483e3add0ac167313b 822 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 294 304 - T 12-10-2018 IPR018030 Fimbrial membrane usher, conserved site Vc3S01_A0381 8b6971ef3799dc483e3add0ac167313b 822 SUPERFAMILY SSF141729 56 159 3.92E-21 T 12-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 Vc3S01_A0381 8b6971ef3799dc483e3add0ac167313b 822 Gene3D G3DSA:3.10.20.410 45 156 2.8E-15 T 12-10-2018 Vc3S01_A0381 8b6971ef3799dc483e3add0ac167313b 822 Pfam PF00577 Outer membrane usher protein 183 735 3.0E-139 T 12-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 Vc3S01_A0381 8b6971ef3799dc483e3add0ac167313b 822 Gene3D G3DSA:2.60.40.2070 742 822 1.4E-10 T 12-10-2018 Vc3S01_A0381 8b6971ef3799dc483e3add0ac167313b 822 Pfam PF13953 PapC C-terminal domain 744 806 2.0E-13 T 12-10-2018 IPR025949 PapC-like, C-terminal domain Vc3S01_A1941 c36e134ed8e32f41aeb59262daa84200 266 SUPERFAMILY SSF56349 20 256 6.12E-22 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Vc3S01_A1941 c36e134ed8e32f41aeb59262daa84200 266 Pfam PF00589 Phage integrase family 26 247 1.7E-15 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Vc3S01_0451 a07e292a0c3ac9cde24cec3a19f08011 103 PIRSF PIRSF000699 1 103 3.1E-37 T 12-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 Vc3S01_0451 a07e292a0c3ac9cde24cec3a19f08011 103 Gene3D G3DSA:1.20.58.280 1 101 1.0E-34 T 12-10-2018 Vc3S01_0451 a07e292a0c3ac9cde24cec3a19f08011 103 SUPERFAMILY SSF46973 2 98 4.58E-34 T 12-10-2018 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily GO:0009401 Vc3S01_0451 a07e292a0c3ac9cde24cec3a19f08011 103 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 6 97 1.1E-33 T 12-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 Vc3S01_A1009 59f021c9e100013658130a31ab252b0c 532 Gene3D G3DSA:3.30.1120.10 437 499 1.5E-99 T 12-10-2018 Vc3S01_A1009 59f021c9e100013658130a31ab252b0c 532 SUPERFAMILY SSF53649 66 521 1.57E-92 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Vc3S01_A1009 59f021c9e100013658130a31ab252b0c 532 Gene3D G3DSA:3.40.720.10 68 436 1.5E-99 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Vc3S01_A1009 59f021c9e100013658130a31ab252b0c 532 Pfam PF14707 C-terminal region of aryl-sulfatase 434 525 4.4E-11 T 12-10-2018 Vc3S01_A1009 59f021c9e100013658130a31ab252b0c 532 Pfam PF00884 Sulfatase 68 407 1.5E-59 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 Vc3S01_2617 8089871d8882de593b08dd1dd5e0681d 197 ProSitePatterns PS01114 GPR1/FUN34/yaaH family signature. 7 16 - T 12-10-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 Vc3S01_2617 8089871d8882de593b08dd1dd5e0681d 197 Pfam PF01184 GPR1/FUN34/yaaH family 3 177 3.2E-36 T 12-10-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 Vc3S01_A0802 70b994c28dcbb035189cd0d86c03f179 482 Gene3D G3DSA:3.40.50.300 7 239 2.5E-28 T 12-10-2018 Vc3S01_A0802 70b994c28dcbb035189cd0d86c03f179 482 Gene3D G3DSA:3.40.50.300 240 469 1.0E-40 T 12-10-2018 Vc3S01_A0802 70b994c28dcbb035189cd0d86c03f179 482 Pfam PF00005 ABC transporter 22 159 1.5E-11 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_A0802 70b994c28dcbb035189cd0d86c03f179 482 SUPERFAMILY SSF52540 235 456 1.05E-33 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A0802 70b994c28dcbb035189cd0d86c03f179 482 Pfam PF00005 ABC transporter 271 422 2.4E-21 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_A0802 70b994c28dcbb035189cd0d86c03f179 482 SMART SM00382 279 480 3.3E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_A0802 70b994c28dcbb035189cd0d86c03f179 482 SUPERFAMILY SSF52540 22 208 1.78E-24 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2649 c6f810b0d370a2689f5c231af89651dc 350 Gene3D G3DSA:3.40.1780.10 14 345 1.4E-117 T 12-10-2018 Vc3S01_2649 c6f810b0d370a2689f5c231af89651dc 350 Gene3D G3DSA:2.40.10.240 64 163 1.4E-117 T 12-10-2018 Vc3S01_2649 c6f810b0d370a2689f5c231af89651dc 350 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 345 4.1E-159 T 12-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 Vc3S01_2649 c6f810b0d370a2689f5c231af89651dc 350 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 346 47.115 T 12-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 Vc3S01_2649 c6f810b0d370a2689f5c231af89651dc 350 SUPERFAMILY SSF111337 1 345 3.53E-138 T 12-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 Vc3S01_2649 c6f810b0d370a2689f5c231af89651dc 350 Pfam PF02547 Queuosine biosynthesis protein 3 345 2.1E-133 T 12-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 Vc3S01_A1038 cb438895fa0289d8908efc3473ec1420 179 SUPERFAMILY SSF55174 14 87 5.23E-17 T 12-10-2018 Vc3S01_A1038 cb438895fa0289d8908efc3473ec1420 179 Gene3D G3DSA:3.10.290.10 13 88 5.9E-21 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Vc3S01_A1038 cb438895fa0289d8908efc3473ec1420 179 Pfam PF13275 S4 domain 25 86 1.0E-21 T 12-10-2018 Vc3S01_0386 503c22bb89633684ac17b5f06c0e1b5a 574 Gene3D G3DSA:3.30.450.90 147 286 8.4E-44 T 12-10-2018 Vc3S01_0386 503c22bb89633684ac17b5f06c0e1b5a 574 Gene3D G3DSA:3.40.50.300 289 565 6.5E-100 T 12-10-2018 Vc3S01_0386 503c22bb89633684ac17b5f06c0e1b5a 574 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 381 395 - T 12-10-2018 IPR001482 Type II/IV secretion system protein Vc3S01_0386 503c22bb89633684ac17b5f06c0e1b5a 574 Gene3D G3DSA:3.30.300.160 63 145 5.3E-6 T 12-10-2018 Vc3S01_0386 503c22bb89633684ac17b5f06c0e1b5a 574 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 42 148 8.0E-23 T 12-10-2018 IPR007831 General secretory system II, protein E, N-terminal Vc3S01_0386 503c22bb89633684ac17b5f06c0e1b5a 574 Pfam PF00437 Type II/IV secretion system protein 189 453 7.6E-78 T 12-10-2018 IPR001482 Type II/IV secretion system protein Vc3S01_0386 503c22bb89633684ac17b5f06c0e1b5a 574 SUPERFAMILY SSF52540 181 559 4.34E-92 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0386 503c22bb89633684ac17b5f06c0e1b5a 574 SMART SM00382 314 435 5.3E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_0386 503c22bb89633684ac17b5f06c0e1b5a 574 SUPERFAMILY SSF160246 3 145 6.02E-40 T 12-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily Vc3S01_0042 db4d726bc4fb56cfc78f6aaa7b2b3a5a 313 Gene3D G3DSA:3.40.190.10 93 295 2.0E-69 T 12-10-2018 Vc3S01_0042 db4d726bc4fb56cfc78f6aaa7b2b3a5a 313 SUPERFAMILY SSF46785 7 87 3.04E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_0042 db4d726bc4fb56cfc78f6aaa7b2b3a5a 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 1.3E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_0042 db4d726bc4fb56cfc78f6aaa7b2b3a5a 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 1.3E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_0042 db4d726bc4fb56cfc78f6aaa7b2b3a5a 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 1.3E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_0042 db4d726bc4fb56cfc78f6aaa7b2b3a5a 313 SUPERFAMILY SSF53850 92 298 5.79E-41 T 12-10-2018 Vc3S01_0042 db4d726bc4fb56cfc78f6aaa7b2b3a5a 313 Gene3D G3DSA:1.10.10.10 3 90 1.2E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_0042 db4d726bc4fb56cfc78f6aaa7b2b3a5a 313 Pfam PF03466 LysR substrate binding domain 99 299 5.9E-24 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_0042 db4d726bc4fb56cfc78f6aaa7b2b3a5a 313 Gene3D G3DSA:3.40.190.10 172 271 2.0E-69 T 12-10-2018 Vc3S01_0042 db4d726bc4fb56cfc78f6aaa7b2b3a5a 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 2.5E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A1227 db1ff241cdac76828a4522223f35fea4 264 SUPERFAMILY SSF81606 8 236 4.32E-61 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Vc3S01_A1227 db1ff241cdac76828a4522223f35fea4 264 Gene3D G3DSA:3.60.40.10 1 238 1.1E-59 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Vc3S01_A1227 db1ff241cdac76828a4522223f35fea4 264 SMART SM00332 1 235 3.1E-19 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Vc3S01_A1227 db1ff241cdac76828a4522223f35fea4 264 SMART SM00331 11 237 7.0E-20 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Vc3S01_A1227 db1ff241cdac76828a4522223f35fea4 264 Pfam PF13672 Protein phosphatase 2C 20 211 6.1E-22 T 12-10-2018 Vc3S01_A0603 187c77df80e55fbbba9f217851be1a90 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 1.2E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A0603 187c77df80e55fbbba9f217851be1a90 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 221 1.2E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A0603 187c77df80e55fbbba9f217851be1a90 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.2E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A0603 187c77df80e55fbbba9f217851be1a90 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 1.2E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A0603 187c77df80e55fbbba9f217851be1a90 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 1.2E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A0603 187c77df80e55fbbba9f217851be1a90 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 1.2E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A0603 187c77df80e55fbbba9f217851be1a90 239 SUPERFAMILY SSF51735 3 223 4.36E-63 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_A0603 187c77df80e55fbbba9f217851be1a90 239 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 132 160 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Vc3S01_A0603 187c77df80e55fbbba9f217851be1a90 239 Gene3D G3DSA:3.40.50.720 1 239 4.6E-78 T 12-10-2018 Vc3S01_A0603 187c77df80e55fbbba9f217851be1a90 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 2.2E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A0603 187c77df80e55fbbba9f217851be1a90 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 2.2E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A0603 187c77df80e55fbbba9f217851be1a90 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 2.2E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A0603 187c77df80e55fbbba9f217851be1a90 239 Pfam PF00106 short chain dehydrogenase 3 189 1.6E-52 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_2408 0518b71d9721f96f74a7a7636454d864 73 Pfam PF10981 Protein of unknown function (DUF2788) 18 67 1.1E-18 T 12-10-2018 IPR021249 Protein of unknown function DUF2788 Vc3S01_0661 cbf9453fcd9592cee9deac9d49fbb084 69 Pfam PF06568 Domain of unknown function (DUF1127) 23 57 2.5E-9 T 12-10-2018 IPR009506 Protein of unknown function DUF1127 Vc3S01_A1776 1d8d2781b1f5030b8dd14705ea794a70 148 Gene3D G3DSA:1.10.720.30 24 83 9.1E-28 T 12-10-2018 IPR036361 SAP domain superfamily Vc3S01_A1776 1d8d2781b1f5030b8dd14705ea794a70 148 Pfam PF09905 DNA-binding protein VF530 16 78 2.4E-32 T 12-10-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 Vc3S01_A1606 18dc2a28951ac4a22f0f389a9e3665ad 234 Gene3D G3DSA:3.40.50.150 24 232 2.6E-41 T 12-10-2018 Vc3S01_A1606 18dc2a28951ac4a22f0f389a9e3665ad 234 SUPERFAMILY SSF53335 4 202 3.07E-36 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Vc3S01_A1606 18dc2a28951ac4a22f0f389a9e3665ad 234 Pfam PF08241 Methyltransferase domain 44 139 2.0E-18 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Vc3S01_1869 17649e085424100ec3d7d78bcd3649cf 386 Hamap MF_00609 Histidine decarboxylase [hdc]. 2 374 70.361 T 12-10-2018 IPR023523 Histidine decarboxylase, bacteria GO:0004398|GO:0030170 KEGG: 00340+4.1.1.22|MetaCyc: PWY-6173 Vc3S01_1869 17649e085424100ec3d7d78bcd3649cf 386 ProSitePatterns PS00392 DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 226 247 - T 12-10-2018 IPR021115 Pyridoxal-phosphate binding site GO:0016831 Vc3S01_1869 17649e085424100ec3d7d78bcd3649cf 386 SUPERFAMILY SSF53383 20 369 8.33E-76 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Vc3S01_1869 17649e085424100ec3d7d78bcd3649cf 386 Gene3D G3DSA:3.40.640.10 40 312 7.1E-53 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Vc3S01_1869 17649e085424100ec3d7d78bcd3649cf 386 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 110 315 4.4E-23 T 12-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 Vc3S01_3213 2ef2d6b725eb8ae0e288e2d35ea6584c 293 SMART SM00470 40 130 7.5E-36 T 12-10-2018 IPR003115 ParB/Sulfiredoxin Vc3S01_3213 2ef2d6b725eb8ae0e288e2d35ea6584c 293 Gene3D G3DSA:3.90.1530.30 53 116 1.6E-26 T 12-10-2018 Vc3S01_3213 2ef2d6b725eb8ae0e288e2d35ea6584c 293 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 39 214 1.1E-56 T 12-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 Vc3S01_3213 2ef2d6b725eb8ae0e288e2d35ea6584c 293 Pfam PF02195 ParB-like nuclease domain 43 130 5.9E-29 T 12-10-2018 IPR003115 ParB/Sulfiredoxin Vc3S01_3213 2ef2d6b725eb8ae0e288e2d35ea6584c 293 Gene3D G3DSA:1.10.10.2830 117 230 2.4E-34 T 12-10-2018 Vc3S01_3213 2ef2d6b725eb8ae0e288e2d35ea6584c 293 SUPERFAMILY SSF110849 44 174 1.57E-32 T 12-10-2018 IPR036086 ParB/Sulfiredoxin superfamily Vc3S01_0290 cecb605cf4c07e2ebaf887304ba38819 118 Pfam PF02635 DsrE/DsrF-like family 4 118 1.1E-24 T 12-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein Vc3S01_0290 cecb605cf4c07e2ebaf887304ba38819 118 SUPERFAMILY SSF75169 3 118 5.0E-36 T 12-10-2018 IPR027396 DsrEFH-like Vc3S01_0290 cecb605cf4c07e2ebaf887304ba38819 118 Gene3D G3DSA:3.40.1260.10 1 118 1.2E-38 T 12-10-2018 IPR027396 DsrEFH-like Vc3S01_0290 cecb605cf4c07e2ebaf887304ba38819 118 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 3 118 5.0E-46 T 12-10-2018 IPR017462 Sulphur relay, TusC/DsrF Vc3S01_0107 7507a24b23649209a9e894a851a0d06b 111 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 29 47 - T 12-10-2018 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 Vc3S01_0107 7507a24b23649209a9e894a851a0d06b 111 Pfam PF01022 Bacterial regulatory protein, arsR family 12 57 3.1E-13 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Vc3S01_0107 7507a24b23649209a9e894a851a0d06b 111 SUPERFAMILY SSF46785 5 87 2.47E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_0107 7507a24b23649209a9e894a851a0d06b 111 Gene3D G3DSA:1.10.10.10 4 101 5.9E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_0107 7507a24b23649209a9e894a851a0d06b 111 SMART SM00418 5 83 1.3E-26 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Vc3S01_0107 7507a24b23649209a9e894a851a0d06b 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 27 38 9.9E-20 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Vc3S01_0107 7507a24b23649209a9e894a851a0d06b 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 9.9E-20 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Vc3S01_0107 7507a24b23649209a9e894a851a0d06b 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 7 22 9.9E-20 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Vc3S01_0107 7507a24b23649209a9e894a851a0d06b 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 55 9.9E-20 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Vc3S01_p40014 6c9375f2206b58a5be234bea863e42a5 318 SUPERFAMILY SSF46785 49 100 5.45E-5 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_p40014 6c9375f2206b58a5be234bea863e42a5 318 Pfam PF09079 CDC6, C terminal winged helix domain 58 102 1.7E-6 T 12-10-2018 IPR015163 Cdc6, C-terminal Reactome: R-HSA-176187|Reactome: R-HSA-539107|Reactome: R-HSA-68689|Reactome: R-HSA-68827|Reactome: R-HSA-68867|Reactome: R-HSA-68949|Reactome: R-HSA-68962 Vc3S01_p40014 6c9375f2206b58a5be234bea863e42a5 318 Gene3D G3DSA:1.10.10.10 30 115 1.1E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A1187 6962d29c845a5b79440bdf74db671eaf 260 SUPERFAMILY SSF52833 82 253 1.23E-41 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Vc3S01_A1187 6962d29c845a5b79440bdf74db671eaf 260 Pfam PF13462 Thioredoxin 83 231 4.7E-34 T 12-10-2018 IPR012336 Thioredoxin-like fold Vc3S01_A1187 6962d29c845a5b79440bdf74db671eaf 260 Gene3D G3DSA:3.40.30.10 86 253 6.5E-57 T 12-10-2018 Vc3S01_A1187 6962d29c845a5b79440bdf74db671eaf 260 Gene3D G3DSA:1.10.40.80 139 198 6.5E-57 T 12-10-2018 Vc3S01_A0419 e03529885f8ea7f60fbf9c361879f294 679 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 504 534 - T 12-10-2018 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 Vc3S01_A0419 e03529885f8ea7f60fbf9c361879f294 679 Gene3D G3DSA:2.130.10.120 70 403 1.6E-246 T 12-10-2018 Vc3S01_A0419 e03529885f8ea7f60fbf9c361879f294 679 Gene3D G3DSA:3.40.50.1820 12 642 1.6E-246 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_A0419 e03529885f8ea7f60fbf9c361879f294 679 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 5 401 4.3E-120 T 12-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 Vc3S01_A0419 e03529885f8ea7f60fbf9c361879f294 679 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 527 547 5.9E-60 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Vc3S01_A0419 e03529885f8ea7f60fbf9c361879f294 679 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 443 461 5.9E-60 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Vc3S01_A0419 e03529885f8ea7f60fbf9c361879f294 679 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 602 624 5.9E-60 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Vc3S01_A0419 e03529885f8ea7f60fbf9c361879f294 679 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 497 516 5.9E-60 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Vc3S01_A0419 e03529885f8ea7f60fbf9c361879f294 679 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 583 598 5.9E-60 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Vc3S01_A0419 e03529885f8ea7f60fbf9c361879f294 679 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 469 493 5.9E-60 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Vc3S01_A0419 e03529885f8ea7f60fbf9c361879f294 679 SUPERFAMILY SSF53474 411 663 5.77E-50 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_A0419 e03529885f8ea7f60fbf9c361879f294 679 SUPERFAMILY SSF50993 1 407 1.91E-95 T 12-10-2018 Vc3S01_A0419 e03529885f8ea7f60fbf9c361879f294 679 Pfam PF00326 Prolyl oligopeptidase family 459 674 5.2E-70 T 12-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 Vc3S01_0541 9acbca6eaa52c4a378ab562099950829 85 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 10 80 9.7E-19 T 12-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 Vc3S01_0541 9acbca6eaa52c4a378ab562099950829 85 Hamap MF_00404 Probable oxaloacetate decarboxylase gamma chain [oadG]. 1 85 34.029 T 12-10-2018 IPR023424 Oxaloacetate decarboxylase gamma chain, probable GO:0008948 KEGG: 00620+4.1.1.3 Vc3S01_0541 9acbca6eaa52c4a378ab562099950829 85 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 5 81 7.5E-19 T 12-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 Vc3S01_A1416 89b4079327e94fbfff91947b8d760277 350 SUPERFAMILY SSF55785 75 181 3.81E-10 T 12-10-2018 IPR035965 PAS domain superfamily Vc3S01_A1416 89b4079327e94fbfff91947b8d760277 350 Gene3D G3DSA:3.30.70.270 182 342 4.0E-49 T 12-10-2018 Vc3S01_A1416 89b4079327e94fbfff91947b8d760277 350 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 179 334 3.8E-44 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A1416 89b4079327e94fbfff91947b8d760277 350 Pfam PF00990 Diguanylate cyclase, GGDEF domain 184 331 2.2E-38 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A1416 89b4079327e94fbfff91947b8d760277 350 SMART SM00267 172 336 9.7E-44 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A1416 89b4079327e94fbfff91947b8d760277 350 SUPERFAMILY SSF55073 188 337 5.65E-42 T 12-10-2018 IPR029787 Nucleotide cyclase Vc3S01_A1416 89b4079327e94fbfff91947b8d760277 350 Gene3D G3DSA:3.30.450.20 63 181 2.0E-11 T 12-10-2018 Vc3S01_A0021 e78b796d0757600bf0d209f6a16638c7 261 Gene3D G3DSA:2.50.20.10 28 255 3.4E-40 T 12-10-2018 Vc3S01_A0021 e78b796d0757600bf0d209f6a16638c7 261 Pfam PF17131 Outer membrane lipoprotein-sorting protein 80 254 2.6E-37 T 12-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein Vc3S01_A0021 e78b796d0757600bf0d209f6a16638c7 261 PIRSF PIRSF028205 1 258 1.2E-115 T 12-10-2018 IPR011220 Uncharacterised conserved protein UCP028205 Vc3S01_2873 98ce6ed3011d0d138e7117ce38d3d1cb 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 2.0E-18 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_2873 98ce6ed3011d0d138e7117ce38d3d1cb 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 29.456 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_2873 98ce6ed3011d0d138e7117ce38d3d1cb 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 2.7E-39 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_2873 98ce6ed3011d0d138e7117ce38d3d1cb 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 2.7E-39 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_2873 98ce6ed3011d0d138e7117ce38d3d1cb 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 2.7E-39 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_2873 98ce6ed3011d0d138e7117ce38d3d1cb 85 Gene3D G3DSA:2.40.50.100 21 85 1.1E-31 T 12-10-2018 Vc3S01_2873 98ce6ed3011d0d138e7117ce38d3d1cb 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 1.4E-43 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_2873 98ce6ed3011d0d138e7117ce38d3d1cb 85 Pfam PF01016 Ribosomal L27 protein 2 82 9.4E-40 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_2873 98ce6ed3011d0d138e7117ce38d3d1cb 85 SUPERFAMILY SSF110324 2 80 1.01E-34 T 12-10-2018 Vc3S01_2873 98ce6ed3011d0d138e7117ce38d3d1cb 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 12-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_2076 084967d9263c81bad159499e2e49d0c7 350 Hamap MF_01694 Biotin synthase [bioB]. 5 313 41.501 T 12-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Vc3S01_2076 084967d9263c81bad159499e2e49d0c7 350 Gene3D G3DSA:3.20.20.70 4 315 1.1E-131 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_2076 084967d9263c81bad159499e2e49d0c7 350 PIRSF PIRSF001619 1 319 1.7E-137 T 12-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Vc3S01_2076 084967d9263c81bad159499e2e49d0c7 350 TIGRFAM TIGR00433 bioB: biotin synthase 15 310 5.7E-124 T 12-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Vc3S01_2076 084967d9263c81bad159499e2e49d0c7 350 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 220 310 4.8E-20 T 12-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Vc3S01_2076 084967d9263c81bad159499e2e49d0c7 350 SMART SM00876 220 312 2.3E-45 T 12-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Vc3S01_2076 084967d9263c81bad159499e2e49d0c7 350 SUPERFAMILY SSF102114 5 310 3.66E-88 T 12-10-2018 Vc3S01_2076 084967d9263c81bad159499e2e49d0c7 350 SMART SM00729 43 255 1.1E-40 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Vc3S01_2076 084967d9263c81bad159499e2e49d0c7 350 Pfam PF04055 Radical SAM superfamily 50 199 3.5E-14 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Vc3S01_A1408 e4da1bce9a7c19b32da99e4c3eefdf69 262 SUPERFAMILY SSF117892 49 182 6.41E-43 T 12-10-2018 IPR036013 Band 7/SPFH domain superfamily Vc3S01_A1408 e4da1bce9a7c19b32da99e4c3eefdf69 262 SMART SM00244 18 175 5.1E-63 T 12-10-2018 IPR001107 Band 7 domain Vc3S01_A1408 e4da1bce9a7c19b32da99e4c3eefdf69 262 Gene3D G3DSA:3.30.479.30 46 177 1.7E-48 T 12-10-2018 Vc3S01_A1408 e4da1bce9a7c19b32da99e4c3eefdf69 262 PRINTS PR00721 Stomatin signature 127 150 4.5E-63 T 12-10-2018 IPR001972 Stomatin family GO:0016020 Vc3S01_A1408 e4da1bce9a7c19b32da99e4c3eefdf69 262 PRINTS PR00721 Stomatin signature 170 191 4.5E-63 T 12-10-2018 IPR001972 Stomatin family GO:0016020 Vc3S01_A1408 e4da1bce9a7c19b32da99e4c3eefdf69 262 PRINTS PR00721 Stomatin signature 25 47 4.5E-63 T 12-10-2018 IPR001972 Stomatin family GO:0016020 Vc3S01_A1408 e4da1bce9a7c19b32da99e4c3eefdf69 262 PRINTS PR00721 Stomatin signature 195 218 4.5E-63 T 12-10-2018 IPR001972 Stomatin family GO:0016020 Vc3S01_A1408 e4da1bce9a7c19b32da99e4c3eefdf69 262 PRINTS PR00721 Stomatin signature 151 169 4.5E-63 T 12-10-2018 IPR001972 Stomatin family GO:0016020 Vc3S01_A1408 e4da1bce9a7c19b32da99e4c3eefdf69 262 PRINTS PR00721 Stomatin signature 107 124 4.5E-63 T 12-10-2018 IPR001972 Stomatin family GO:0016020 Vc3S01_A1408 e4da1bce9a7c19b32da99e4c3eefdf69 262 PRINTS PR00721 Stomatin signature 72 93 4.5E-63 T 12-10-2018 IPR001972 Stomatin family GO:0016020 Vc3S01_A1408 e4da1bce9a7c19b32da99e4c3eefdf69 262 Pfam PF01145 SPFH domain / Band 7 family 23 191 1.6E-35 T 12-10-2018 IPR001107 Band 7 domain Vc3S01_0422 1a0e12a478278d6781d74069e69b7f62 267 Pfam PF00005 ABC transporter 23 170 3.4E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_0422 1a0e12a478278d6781d74069e69b7f62 267 SUPERFAMILY SSF52540 6 236 5.32E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0422 1a0e12a478278d6781d74069e69b7f62 267 Gene3D G3DSA:3.40.50.300 4 256 8.7E-67 T 12-10-2018 Vc3S01_0422 1a0e12a478278d6781d74069e69b7f62 267 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_0422 1a0e12a478278d6781d74069e69b7f62 267 SMART SM00382 31 237 8.1E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_p30021 86030fb16abf1da5c2cf915f5f0a7766 212 SUPERFAMILY SSF53041 1 159 5.62E-30 T 12-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 Vc3S01_p30021 86030fb16abf1da5c2cf915f5f0a7766 212 SMART SM00857 3 159 1.4E-36 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Vc3S01_p30021 86030fb16abf1da5c2cf915f5f0a7766 212 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 12-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 Vc3S01_p30021 86030fb16abf1da5c2cf915f5f0a7766 212 Gene3D G3DSA:3.40.50.1390 1 169 1.0E-30 T 12-10-2018 Vc3S01_p30021 86030fb16abf1da5c2cf915f5f0a7766 212 Pfam PF00239 Resolvase, N terminal domain 3 159 9.0E-27 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Vc3S01_p30021 86030fb16abf1da5c2cf915f5f0a7766 212 ProSitePatterns PS00398 Site-specific recombinases signature 2. 62 74 - T 12-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 Vc3S01_2103 84fcdfc394c5f337b502b2aa6d7e3b25 482 Gene3D G3DSA:3.40.190.10 40 268 2.2E-42 T 12-10-2018 Vc3S01_2103 84fcdfc394c5f337b502b2aa6d7e3b25 482 Gene3D G3DSA:3.40.190.10 133 237 2.2E-42 T 12-10-2018 Vc3S01_2103 84fcdfc394c5f337b502b2aa6d7e3b25 482 Pfam PF01464 Transglycosylase SLT domain 308 416 2.7E-17 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 Vc3S01_2103 84fcdfc394c5f337b502b2aa6d7e3b25 482 SUPERFAMILY SSF53850 40 264 7.01E-30 T 12-10-2018 Vc3S01_2103 84fcdfc394c5f337b502b2aa6d7e3b25 482 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 55 263 8.3E-22 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Vc3S01_2103 84fcdfc394c5f337b502b2aa6d7e3b25 482 SUPERFAMILY SSF53955 298 459 4.22E-34 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily Vc3S01_2103 84fcdfc394c5f337b502b2aa6d7e3b25 482 SMART SM00062 44 281 1.8E-10 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Vc3S01_2103 84fcdfc394c5f337b502b2aa6d7e3b25 482 Gene3D G3DSA:1.10.530.10 296 465 7.8E-34 T 12-10-2018 Vc3S01_0408 658e33e4c0111eea0657cf077bd8733c 320 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 225 241 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Vc3S01_0408 658e33e4c0111eea0657cf077bd8733c 320 SUPERFAMILY SSF52283 4 139 2.27E-33 T 12-10-2018 Vc3S01_0408 658e33e4c0111eea0657cf077bd8733c 320 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 32 317 2.5E-24 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 Vc3S01_0408 658e33e4c0111eea0657cf077bd8733c 320 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 289 1.1E-55 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 Vc3S01_0408 658e33e4c0111eea0657cf077bd8733c 320 Gene3D G3DSA:3.40.50.720 25 317 1.8E-111 T 12-10-2018 Vc3S01_0408 658e33e4c0111eea0657cf077bd8733c 320 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 196 218 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Vc3S01_0408 658e33e4c0111eea0657cf077bd8733c 320 Gene3D G3DSA:3.40.50.720 99 288 1.8E-111 T 12-10-2018 Vc3S01_0408 658e33e4c0111eea0657cf077bd8733c 320 SUPERFAMILY SSF51735 103 290 1.09E-52 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_0794 4c876bf76b38a83fdcca61ca6ed9626f 212 Pfam PF01351 Ribonuclease HII 27 203 3.6E-38 T 12-10-2018 IPR024567 Ribonuclease HII/HIII domain Vc3S01_0794 4c876bf76b38a83fdcca61ca6ed9626f 212 SUPERFAMILY SSF53098 19 209 3.95E-71 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Vc3S01_0794 4c876bf76b38a83fdcca61ca6ed9626f 212 Hamap MF_00052_B Ribonuclease HII [rnhB]. 25 204 37.979 T 12-10-2018 IPR022898 Ribonuclease HII GO:0004523 Vc3S01_0794 4c876bf76b38a83fdcca61ca6ed9626f 212 Gene3D G3DSA:3.30.420.10 7 212 1.5E-79 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Vc3S01_2923 71655e3e7b62f43268ca525407507b65 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 19.205 T 12-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 Vc3S01_2923 71655e3e7b62f43268ca525407507b65 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 12-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_2923 71655e3e7b62f43268ca525407507b65 144 Gene3D G3DSA:3.100.10.10 70 144 1.7E-13 T 12-10-2018 Vc3S01_2923 71655e3e7b62f43268ca525407507b65 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 6.4E-51 T 12-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_2923 71655e3e7b62f43268ca525407507b65 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 1.4E-31 T 12-10-2018 IPR021131 Ribosomal protein L18e/L15P Vc3S01_2923 71655e3e7b62f43268ca525407507b65 144 SUPERFAMILY SSF52080 4 143 9.81E-47 T 12-10-2018 IPR036227 Ribosomal L18e/L15P superfamily Vc3S01_A0450 09fd857f894b2c1805f3db545753553b 443 SMART SM00490 260 341 1.7E-30 T 12-10-2018 IPR001650 Helicase, C-terminal Vc3S01_A0450 09fd857f894b2c1805f3db545753553b 443 Pfam PF00271 Helicase conserved C-terminal domain 235 341 7.0E-30 T 12-10-2018 IPR001650 Helicase, C-terminal Vc3S01_A0450 09fd857f894b2c1805f3db545753553b 443 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site Vc3S01_A0450 09fd857f894b2c1805f3db545753553b 443 SUPERFAMILY SSF52540 73 360 1.23E-68 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A0450 09fd857f894b2c1805f3db545753553b 443 SMART SM00487 20 223 2.0E-52 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Vc3S01_A0450 09fd857f894b2c1805f3db545753553b 443 Gene3D G3DSA:3.40.50.300 1 212 1.2E-72 T 12-10-2018 Vc3S01_A0450 09fd857f894b2c1805f3db545753553b 443 Gene3D G3DSA:3.40.50.300 214 425 6.7E-51 T 12-10-2018 Vc3S01_A0450 09fd857f894b2c1805f3db545753553b 443 Pfam PF00270 DEAD/DEAH box helicase 25 196 9.4E-48 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Vc3S01_0312 785d7bcec211600faef857f2c7d4ac01 490 PIRSF PIRSF000350 1 473 1.8E-61 T 12-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 Vc3S01_0312 785d7bcec211600faef857f2c7d4ac01 490 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 174 192 9.8E-20 T 12-10-2018 Vc3S01_0312 785d7bcec211600faef857f2c7d4ac01 490 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 9.8E-20 T 12-10-2018 Vc3S01_0312 785d7bcec211600faef857f2c7d4ac01 490 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 268 284 9.8E-20 T 12-10-2018 Vc3S01_0312 785d7bcec211600faef857f2c7d4ac01 490 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 298 320 9.8E-20 T 12-10-2018 Vc3S01_0312 785d7bcec211600faef857f2c7d4ac01 490 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 135 153 9.8E-20 T 12-10-2018 Vc3S01_0312 785d7bcec211600faef857f2c7d4ac01 490 Gene3D G3DSA:3.50.50.60 7 336 5.3E-95 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_0312 785d7bcec211600faef857f2c7d4ac01 490 Gene3D G3DSA:1.10.287.990 37 107 5.3E-95 T 12-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Vc3S01_0312 785d7bcec211600faef857f2c7d4ac01 490 SUPERFAMILY SSF55424 355 473 7.9E-25 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Vc3S01_0312 785d7bcec211600faef857f2c7d4ac01 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 269 283 1.8E-40 T 12-10-2018 Vc3S01_0312 785d7bcec211600faef857f2c7d4ac01 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 1.8E-40 T 12-10-2018 Vc3S01_0312 785d7bcec211600faef857f2c7d4ac01 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 313 320 1.8E-40 T 12-10-2018 Vc3S01_0312 785d7bcec211600faef857f2c7d4ac01 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 1.8E-40 T 12-10-2018 Vc3S01_0312 785d7bcec211600faef857f2c7d4ac01 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 174 199 1.8E-40 T 12-10-2018 Vc3S01_0312 785d7bcec211600faef857f2c7d4ac01 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 350 371 1.8E-40 T 12-10-2018 Vc3S01_0312 785d7bcec211600faef857f2c7d4ac01 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 418 433 1.8E-40 T 12-10-2018 Vc3S01_0312 785d7bcec211600faef857f2c7d4ac01 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 138 147 1.8E-40 T 12-10-2018 Vc3S01_0312 785d7bcec211600faef857f2c7d4ac01 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 440 460 1.8E-40 T 12-10-2018 Vc3S01_0312 785d7bcec211600faef857f2c7d4ac01 490 Gene3D G3DSA:3.30.390.30 353 476 2.4E-42 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Vc3S01_0312 785d7bcec211600faef857f2c7d4ac01 490 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 356 465 4.4E-17 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Vc3S01_0312 785d7bcec211600faef857f2c7d4ac01 490 SUPERFAMILY SSF51905 1 373 3.78E-43 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_0312 785d7bcec211600faef857f2c7d4ac01 490 Gene3D G3DSA:3.50.50.60 147 275 5.3E-95 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_0312 785d7bcec211600faef857f2c7d4ac01 490 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 333 3.2E-43 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Vc3S01_A1888 9c3892a34da95b65c7678057c24e58fd 225 Gene3D G3DSA:3.40.1080.10 6 219 4.6E-92 T 12-10-2018 Vc3S01_A1888 9c3892a34da95b65c7678057c24e58fd 225 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 11 214 4.7E-91 T 12-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 Vc3S01_A1888 9c3892a34da95b65c7678057c24e58fd 225 SMART SM00882 12 207 9.2E-62 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 Vc3S01_A1888 9c3892a34da95b65c7678057c24e58fd 225 SUPERFAMILY SSF100950 10 223 2.46E-68 T 12-10-2018 IPR037171 NagB/RpiA transferase-like Vc3S01_A1888 9c3892a34da95b65c7678057c24e58fd 225 Pfam PF01144 Coenzyme A transferase 14 206 1.1E-37 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 Vc3S01_1924 b3bc09548bbdab9d088295bcea5b0d61 411 Gene3D G3DSA:3.40.640.10 33 289 7.1E-135 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Vc3S01_1924 b3bc09548bbdab9d088295bcea5b0d61 411 SUPERFAMILY SSF53383 3 410 4.35E-94 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Vc3S01_1924 b3bc09548bbdab9d088295bcea5b0d61 411 TIGRFAM TIGR01976 am_tr_V_VC1184: cysteine desulfurase family protein 3 404 1.3E-163 T 12-10-2018 IPR011340 Cysteine desulfurase-related Vc3S01_1924 b3bc09548bbdab9d088295bcea5b0d61 411 Pfam PF00266 Aminotransferase class-V 26 401 7.7E-66 T 12-10-2018 IPR000192 Aminotransferase class V domain Vc3S01_1924 b3bc09548bbdab9d088295bcea5b0d61 411 Gene3D G3DSA:3.90.1150.10 24 405 7.1E-135 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Vc3S01_1257 c3d6c8af8cc996871cb76236d640ac55 239 SUPERFAMILY SSF53098 40 228 1.14E-37 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Vc3S01_1257 c3d6c8af8cc996871cb76236d640ac55 239 SMART SM00479 48 229 5.1E-19 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Vc3S01_1257 c3d6c8af8cc996871cb76236d640ac55 239 Pfam PF00929 Exonuclease 50 220 2.3E-13 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Vc3S01_1257 c3d6c8af8cc996871cb76236d640ac55 239 Gene3D G3DSA:3.30.420.10 43 231 1.4E-35 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Vc3S01_1257 c3d6c8af8cc996871cb76236d640ac55 239 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 44 230 7.8E-22 T 12-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Vc3S01_3006 2820663759f79b97134a69f108e3b5d0 269 SUPERFAMILY SSF46946 130 221 7.72E-31 T 12-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 Vc3S01_3006 2820663759f79b97134a69f108e3b5d0 269 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 269 43.886 T 12-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 Vc3S01_3006 2820663759f79b97134a69f108e3b5d0 269 SUPERFAMILY SSF81624 2 138 5.89E-42 T 12-10-2018 IPR035937 MutM-like, N-terminal Vc3S01_3006 2820663759f79b97134a69f108e3b5d0 269 SMART SM00898 2 115 6.8E-55 T 12-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 Vc3S01_3006 2820663759f79b97134a69f108e3b5d0 269 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 1.4E-32 T 12-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 Vc3S01_3006 2820663759f79b97134a69f108e3b5d0 269 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 129 218 1.2E-28 T 12-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 Vc3S01_3006 2820663759f79b97134a69f108e3b5d0 269 Pfam PF06827 Zinc finger found in FPG and IleRS 241 269 5.8E-8 T 12-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 Vc3S01_3006 2820663759f79b97134a69f108e3b5d0 269 Gene3D G3DSA:3.20.190.10 2 128 1.1E-42 T 12-10-2018 IPR035937 MutM-like, N-terminal Vc3S01_3006 2820663759f79b97134a69f108e3b5d0 269 SMART SM01232 129 221 2.2E-47 T 12-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 Vc3S01_3006 2820663759f79b97134a69f108e3b5d0 269 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 268 2.3E-96 T 12-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 Vc3S01_3006 2820663759f79b97134a69f108e3b5d0 269 SUPERFAMILY SSF57716 217 269 3.71E-16 T 12-10-2018 Vc3S01_3006 2820663759f79b97134a69f108e3b5d0 269 Gene3D G3DSA:1.10.8.50 131 269 7.9E-48 T 12-10-2018 Vc3S01_3006 2820663759f79b97134a69f108e3b5d0 269 ProSitePatterns PS01242 Zinc finger FPG-type signature. 244 268 - T 12-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 Vc3S01_2355 63033b160035dcfde549968afaa8f458 678 Gene3D G3DSA:3.40.50.300 374 644 2.3E-7 T 12-10-2018 Vc3S01_2355 63033b160035dcfde549968afaa8f458 678 SUPERFAMILY SSF52540 1 622 5.55E-17 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2355 63033b160035dcfde549968afaa8f458 678 Gene3D G3DSA:3.40.50.300 1 281 3.7E-22 T 12-10-2018 Vc3S01_p20207 d435011ffe4690c8ca3a9da23bf87ac4 370 SUPERFAMILY SSF52540 115 368 6.29E-15 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_p20207 d435011ffe4690c8ca3a9da23bf87ac4 370 Pfam PF13401 AAA domain 136 269 8.4E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_p20207 d435011ffe4690c8ca3a9da23bf87ac4 370 Gene3D G3DSA:3.40.50.300 115 280 3.7E-9 T 12-10-2018 Vc3S01_A1893 1e06784b8cf109b6933b0a18d07a7768 726 PIRSF PIRSF009393 1 726 1.4E-286 T 12-10-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 Vc3S01_A1893 1e06784b8cf109b6933b0a18d07a7768 726 SUPERFAMILY SSF55904 578 725 6.28E-44 T 12-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 Vc3S01_A1893 1e06784b8cf109b6933b0a18d07a7768 726 Gene3D G3DSA:3.90.100.10 608 726 6.6E-41 T 12-10-2018 Vc3S01_A1893 1e06784b8cf109b6933b0a18d07a7768 726 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 358 372 - T 12-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 Vc3S01_A1893 1e06784b8cf109b6933b0a18d07a7768 726 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 117 557 4.1E-187 T 12-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 Vc3S01_A1893 1e06784b8cf109b6933b0a18d07a7768 726 TIGRFAM TIGR04301 ODC_inducible: ornithine decarboxylase SpeF 1 725 0.0 T 12-10-2018 IPR027568 Ornithine decarboxylase SpeF GO:0004586 KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 Vc3S01_A1893 1e06784b8cf109b6933b0a18d07a7768 726 Gene3D G3DSA:3.40.640.10 117 427 1.2E-83 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Vc3S01_A1893 1e06784b8cf109b6933b0a18d07a7768 726 SUPERFAMILY SSF52172 1 116 2.29E-24 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_A1893 1e06784b8cf109b6933b0a18d07a7768 726 SUPERFAMILY SSF53383 117 574 6.38E-117 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Vc3S01_A1893 1e06784b8cf109b6933b0a18d07a7768 726 Gene3D G3DSA:3.90.1150.10 429 607 8.7E-68 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Vc3S01_A1893 1e06784b8cf109b6933b0a18d07a7768 726 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 583 711 2.4E-46 T 12-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 Vc3S01_A1893 1e06784b8cf109b6933b0a18d07a7768 726 Gene3D G3DSA:3.40.50.220 22 116 8.6E-13 T 12-10-2018 IPR027464 Ornithine decarboxylase, N-terminal KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 Vc3S01_A1893 1e06784b8cf109b6933b0a18d07a7768 726 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 28 111 2.7E-13 T 12-10-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 Vc3S01_0319 a6a9ad756386fe4b8070738f2b0b0d67 171 Gene3D G3DSA:2.30.30.830 79 171 4.1E-25 T 12-10-2018 Vc3S01_0319 a6a9ad756386fe4b8070738f2b0b0d67 171 PIRSF PIRSF016481 1 171 2.1E-51 T 12-10-2018 IPR007446 Pilus assembly protein PilP Vc3S01_0319 a6a9ad756386fe4b8070738f2b0b0d67 171 Pfam PF04351 Pilus assembly protein, PilP 25 170 6.0E-41 T 12-10-2018 IPR007446 Pilus assembly protein PilP Vc3S01_A0048 d9045d013292eb14f51b72dae91d5f8b 100 PIRSF PIRSF001223 1 100 3.0E-47 T 12-10-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Vc3S01_A0048 d9045d013292eb14f51b72dae91d5f8b 100 SUPERFAMILY SSF54111 1 99 4.05E-44 T 12-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Vc3S01_A0048 d9045d013292eb14f51b72dae91d5f8b 100 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 4.0E-40 T 12-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Vc3S01_A0048 d9045d013292eb14f51b72dae91d5f8b 100 Pfam PF00547 Urease, gamma subunit 1 99 9.1E-46 T 12-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Vc3S01_A0048 d9045d013292eb14f51b72dae91d5f8b 100 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 1 99 8.9E-50 T 12-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Vc3S01_A0048 d9045d013292eb14f51b72dae91d5f8b 100 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 32.863 T 12-10-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Vc3S01_A0048 d9045d013292eb14f51b72dae91d5f8b 100 Gene3D G3DSA:3.30.280.10 1 100 1.1E-45 T 12-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Vc3S01_1915 f3a140f07a952ab831f5c7a75e19183b 557 Pfam PF16655 PhoD-like phosphatase, N-terminal domain 39 126 5.4E-29 T 12-10-2018 IPR032093 Phospholipase D, N-terminal Vc3S01_1915 f3a140f07a952ab831f5c7a75e19183b 557 SUPERFAMILY SSF56300 136 531 1.14E-30 T 12-10-2018 Vc3S01_1915 f3a140f07a952ab831f5c7a75e19183b 557 Gene3D G3DSA:2.60.40.380 29 128 3.4E-32 T 12-10-2018 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 Vc3S01_1915 f3a140f07a952ab831f5c7a75e19183b 557 Gene3D G3DSA:3.60.21.70 129 553 1.7E-119 T 12-10-2018 IPR038607 PhoD-like superfamily Vc3S01_1915 f3a140f07a952ab831f5c7a75e19183b 557 Pfam PF09423 PhoD-like phosphatase 137 528 1.1E-114 T 12-10-2018 IPR018946 Alkaline phosphatase D-related Vc3S01_1855 86990980f8d9a951cff485079af8a6f2 216 Gene3D G3DSA:3.40.50.150 1 216 4.7E-62 T 12-10-2018 Vc3S01_1855 86990980f8d9a951cff485079af8a6f2 216 PIRSF PIRSF023956 1 216 2.0E-72 T 12-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 Vc3S01_1855 86990980f8d9a951cff485079af8a6f2 216 TIGRFAM TIGR03840 TMPT_Se_Te: thiopurine S-methyltransferase, Se/Te detoxification family 5 214 2.5E-78 T 12-10-2018 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification GO:0008119|GO:0010038|GO:0032259 KEGG: 00983+2.1.1.67 Vc3S01_1855 86990980f8d9a951cff485079af8a6f2 216 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 3 215 8.6E-74 T 12-10-2018 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 Vc3S01_1855 86990980f8d9a951cff485079af8a6f2 216 SUPERFAMILY SSF53335 3 214 3.41E-55 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Vc3S01_1855 86990980f8d9a951cff485079af8a6f2 216 Hamap MF_00812 Thiopurine S-methyltransferase [tpm]. 2 215 35.391 T 12-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 Vc3S01_A0592 bcbf94f090d61f7dca147197e9c83643 310 SMART SM00342 222 305 3.9E-24 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_A0592 bcbf94f090d61f7dca147197e9c83643 310 SUPERFAMILY SSF52317 9 185 1.69E-31 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Vc3S01_A0592 bcbf94f090d61f7dca147197e9c83643 310 Pfam PF01965 DJ-1/PfpI family 59 167 1.5E-12 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 Vc3S01_A0592 bcbf94f090d61f7dca147197e9c83643 310 Pfam PF12833 Helix-turn-helix domain 229 307 2.7E-20 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_A0592 bcbf94f090d61f7dca147197e9c83643 310 Gene3D G3DSA:1.10.10.60 200 254 1.2E-9 T 12-10-2018 Vc3S01_A0592 bcbf94f090d61f7dca147197e9c83643 310 SUPERFAMILY SSF46689 207 256 1.48E-5 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_A0592 bcbf94f090d61f7dca147197e9c83643 310 Gene3D G3DSA:1.10.10.60 255 309 5.4E-15 T 12-10-2018 Vc3S01_A0592 bcbf94f090d61f7dca147197e9c83643 310 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 259 301 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Vc3S01_A0592 bcbf94f090d61f7dca147197e9c83643 310 Gene3D G3DSA:3.40.50.880 3 194 4.5E-39 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Vc3S01_A0592 bcbf94f090d61f7dca147197e9c83643 310 SUPERFAMILY SSF46689 258 308 1.43E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_A1271 a19b9fa6b3148a16768692056b4e9977 453 Gene3D G3DSA:3.30.70.270 303 453 2.3E-40 T 12-10-2018 Vc3S01_A1271 a19b9fa6b3148a16768692056b4e9977 453 SUPERFAMILY SSF55073 310 451 2.04E-34 T 12-10-2018 IPR029787 Nucleotide cyclase Vc3S01_A1271 a19b9fa6b3148a16768692056b4e9977 453 Pfam PF00990 Diguanylate cyclase, GGDEF domain 306 451 2.2E-36 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A1271 a19b9fa6b3148a16768692056b4e9977 453 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 304 451 7.3E-35 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A1271 a19b9fa6b3148a16768692056b4e9977 453 SMART SM00267 295 452 2.3E-34 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A1768 d968750d59be8dd0cacc125b23b47f10 121 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 13 116 6.0E-6 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Vc3S01_A1768 d968750d59be8dd0cacc125b23b47f10 121 Gene3D G3DSA:3.10.180.10 8 121 2.3E-17 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Vc3S01_A1768 d968750d59be8dd0cacc125b23b47f10 121 SUPERFAMILY SSF54593 12 120 4.43E-23 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Vc3S01_1728 e4a9fe94472285e8a7e06b3d4de812f3 473 Pfam PF13440 Polysaccharide biosynthesis protein 28 252 3.5E-11 T 12-10-2018 Vc3S01_2345 3393b42e428321af738fbb2c933e1a16 394 Gene3D G3DSA:3.60.120.10 1 389 1.3E-122 T 12-10-2018 IPR005801 ADC synthase GO:0009058 Vc3S01_2345 3393b42e428321af738fbb2c933e1a16 394 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 115 382 8.0E-83 T 12-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 Vc3S01_2345 3393b42e428321af738fbb2c933e1a16 394 SUPERFAMILY SSF56322 15 384 3.01E-87 T 12-10-2018 IPR005801 ADC synthase GO:0009058 Vc3S01_2345 3393b42e428321af738fbb2c933e1a16 394 Pfam PF00425 chorismate binding enzyme 115 374 1.3E-70 T 12-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal Vc3S01_A1714 e192f5f6500367f8de376cb99a1f91a8 385 Pfam PF13533 Biotin-lipoyl like 71 120 5.4E-8 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain Vc3S01_A1714 e192f5f6500367f8de376cb99a1f91a8 385 Gene3D G3DSA:2.40.50.100 69 214 4.1E-48 T 12-10-2018 Vc3S01_A1714 e192f5f6500367f8de376cb99a1f91a8 385 Gene3D G3DSA:2.40.420.20 307 371 4.1E-48 T 12-10-2018 Vc3S01_A1714 e192f5f6500367f8de376cb99a1f91a8 385 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 59 373 1.8E-36 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Vc3S01_A1714 e192f5f6500367f8de376cb99a1f91a8 385 Gene3D G3DSA:2.40.30.170 60 306 4.1E-48 T 12-10-2018 Vc3S01_A1714 e192f5f6500367f8de376cb99a1f91a8 385 Gene3D G3DSA:1.10.287.470 106 180 4.1E-48 T 12-10-2018 Vc3S01_A1714 e192f5f6500367f8de376cb99a1f91a8 385 SUPERFAMILY SSF111369 61 239 3.27E-21 T 12-10-2018 Vc3S01_A1714 e192f5f6500367f8de376cb99a1f91a8 385 Pfam PF13437 HlyD family secretion protein 184 293 6.1E-9 T 12-10-2018 Vc3S01_A1327 d0b35dbff391e1776515f315d007b015 262 Gene3D G3DSA:3.90.1580.10 31 260 2.4E-59 T 12-10-2018 Vc3S01_A1327 d0b35dbff391e1776515f315d007b015 262 Pfam PF03781 Sulfatase-modifying factor enzyme 1 38 259 8.5E-48 T 12-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 Vc3S01_A1327 d0b35dbff391e1776515f315d007b015 262 SUPERFAMILY SSF56436 37 261 1.86E-57 T 12-10-2018 IPR016187 C-type lectin fold Vc3S01_2338 9241964c8be9a670b4e9a9bf1ff145fb 430 SUPERFAMILY SSF56176 342 420 5.73E-20 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Vc3S01_2338 9241964c8be9a670b4e9a9bf1ff145fb 430 SUPERFAMILY SSF54631 197 330 4.88E-23 T 12-10-2018 Vc3S01_2338 9241964c8be9a670b4e9a9bf1ff145fb 430 Gene3D G3DSA:3.30.465.10 337 422 2.2E-24 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Vc3S01_2338 9241964c8be9a670b4e9a9bf1ff145fb 430 SMART SM01091 341 423 3.9E-23 T 12-10-2018 IPR005170 Transporter-associated domain Vc3S01_2338 9241964c8be9a670b4e9a9bf1ff145fb 430 Pfam PF01595 Domain of unknown function DUF21 5 194 1.9E-44 T 12-10-2018 IPR002550 CNNM, transmembrane domain Vc3S01_2338 9241964c8be9a670b4e9a9bf1ff145fb 430 Gene3D G3DSA:3.10.580.10 190 336 1.4E-36 T 12-10-2018 Vc3S01_2338 9241964c8be9a670b4e9a9bf1ff145fb 430 Pfam PF03471 Transporter associated domain 342 421 7.5E-20 T 12-10-2018 IPR005170 Transporter-associated domain Vc3S01_1450 748b9027c8792fd8c63521dd68b9f8a4 273 SUPERFAMILY SSF161098 4 272 7.33E-69 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_1450 748b9027c8792fd8c63521dd68b9f8a4 273 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 264 7.6E-20 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Vc3S01_1450 748b9027c8792fd8c63521dd68b9f8a4 273 Gene3D G3DSA:1.10.3720.10 1 265 9.5E-68 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_A1635 aa9bcbf25ba13f61441c00e94bb8e577 108 Pfam PF13698 Domain of unknown function (DUF4156) 22 106 8.5E-23 T 12-10-2018 IPR025294 Protein of unknown function DUF4156 Vc3S01_2277 c8e30c80f45aed8afae6c98ac6c0a2ab 464 SUPERFAMILY SSF48452 120 257 9.11E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_A0561 f182b858412468e6b2a17852c9039b5e 137 Pfam PF02472 Biopolymer transport protein ExbD/TolR 13 134 1.4E-21 T 12-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 Vc3S01_A0068 3d85c404cbb69425a6ea9367625a0d98 234 Gene3D G3DSA:3.10.200.10 13 234 1.4E-75 T 12-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily Vc3S01_A0068 3d85c404cbb69425a6ea9367625a0d98 234 SUPERFAMILY SSF51069 20 232 5.47E-71 T 12-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily Vc3S01_A0068 3d85c404cbb69425a6ea9367625a0d98 234 Pfam PF00194 Eukaryotic-type carbonic anhydrase 20 232 1.5E-46 T 12-10-2018 IPR001148 Alpha carbonic anhydrase domain Vc3S01_A0068 3d85c404cbb69425a6ea9367625a0d98 234 ProSitePatterns PS00162 Alpha-carbonic anhydrases signature. 107 123 - T 12-10-2018 IPR018338 Carbonic anhydrase, alpha-class, conserved site GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117|Reactome: R-HSA-1475029 Vc3S01_A0068 3d85c404cbb69425a6ea9367625a0d98 234 SMART SM01057 21 233 2.5E-85 T 12-10-2018 IPR001148 Alpha carbonic anhydrase domain Vc3S01_A1945 ce2fe331bb19e109a3161ccd41f7d67f 877 SUPERFAMILY SSF88713 3 271 1.56E-52 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Vc3S01_A1945 ce2fe331bb19e109a3161ccd41f7d67f 877 SMART SM00872 278 356 1.9E-4 T 12-10-2018 IPR015341 Glycoside hydrolase family 38, central domain GO:0004559|GO:0006013 Vc3S01_A1945 ce2fe331bb19e109a3161ccd41f7d67f 877 Gene3D G3DSA:3.20.110.10 1 275 3.8E-92 T 12-10-2018 IPR027291 Glycoside hydrolase 38, N-terminal domain superfamily Vc3S01_A1945 ce2fe331bb19e109a3161ccd41f7d67f 877 Pfam PF01074 Glycosyl hydrolases family 38 N-terminal domain 5 268 1.9E-39 T 12-10-2018 IPR000602 Glycoside hydrolase family 38, N-terminal domain GO:0004559|GO:0006013 Vc3S01_A1945 ce2fe331bb19e109a3161ccd41f7d67f 877 Pfam PF09261 Alpha mannosidase middle domain 285 355 7.3E-5 T 12-10-2018 IPR015341 Glycoside hydrolase family 38, central domain GO:0004559|GO:0006013 Vc3S01_A1945 ce2fe331bb19e109a3161ccd41f7d67f 877 Gene3D G3DSA:2.70.98.30 479 758 7.3E-56 T 12-10-2018 Vc3S01_A1945 ce2fe331bb19e109a3161ccd41f7d67f 877 Pfam PF07748 Glycosyl hydrolases family 38 C-terminal domain 451 655 5.5E-12 T 12-10-2018 IPR011682 Glycosyl hydrolase family 38, C-terminal GO:0004559|GO:0006013 Vc3S01_A1945 ce2fe331bb19e109a3161ccd41f7d67f 877 SUPERFAMILY SSF88688 287 376 4.58E-6 T 12-10-2018 IPR028995 Glycoside hydrolase families 57/38, central domain superfamily Vc3S01_A1945 ce2fe331bb19e109a3161ccd41f7d67f 877 SUPERFAMILY SSF74650 366 855 3.14E-49 T 12-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Vc3S01_A1945 ce2fe331bb19e109a3161ccd41f7d67f 877 Gene3D G3DSA:1.20.1270.50 282 379 6.0E-23 T 12-10-2018 IPR037094 Glycoside hydrolase family 38, central domain superfamily GO:0004559|GO:0006013 Vc3S01_A0838 4e1cad348e93f43964e88156c8ba1099 573 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 384 535 3.3E-31 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Vc3S01_A0838 4e1cad348e93f43964e88156c8ba1099 573 Gene3D G3DSA:1.10.287.950 248 573 2.5E-52 T 12-10-2018 Vc3S01_A0838 4e1cad348e93f43964e88156c8ba1099 573 SUPERFAMILY SSF58104 268 573 5.36E-55 T 12-10-2018 Vc3S01_A0838 4e1cad348e93f43964e88156c8ba1099 573 SMART SM00304 246 300 2.1E-5 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Vc3S01_A0838 4e1cad348e93f43964e88156c8ba1099 573 SMART SM00283 318 572 1.2E-28 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Vc3S01_0807 53214adfd8881a33cb39e8632281f969 416 TIGRFAM TIGR03503 TIGR03503: TIGR03503 family protein 24 400 3.1E-133 T 12-10-2018 IPR020010 Conserved hypothetical protein CHP03503 Vc3S01_0975 2f8c8cd10ad843ef61cae8cc033ec881 212 Pfam PF01914 MarC family integral membrane protein 8 208 1.3E-65 T 12-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 Vc3S01_0975 2f8c8cd10ad843ef61cae8cc033ec881 212 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 3 204 1.7E-66 T 12-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 Vc3S01_A0840 9fba910e88b978cd531e339ee0239720 350 PIRSF PIRSF000808 2 345 4.6E-123 T 12-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 Vc3S01_A0840 9fba910e88b978cd531e339ee0239720 350 Gene3D G3DSA:3.30.428.10 46 177 1.5E-54 T 12-10-2018 IPR036265 HIT-like superfamily Vc3S01_A0840 9fba910e88b978cd531e339ee0239720 350 Gene3D G3DSA:3.30.428.10 178 350 1.8E-70 T 12-10-2018 IPR036265 HIT-like superfamily Vc3S01_A0840 9fba910e88b978cd531e339ee0239720 350 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 4 349 1.4E-183 T 12-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 Vc3S01_A0840 9fba910e88b978cd531e339ee0239720 350 SUPERFAMILY SSF54197 6 179 1.09E-72 T 12-10-2018 IPR036265 HIT-like superfamily Vc3S01_A0840 9fba910e88b978cd531e339ee0239720 350 SUPERFAMILY SSF54197 181 348 8.17E-53 T 12-10-2018 IPR036265 HIT-like superfamily Vc3S01_A0840 9fba910e88b978cd531e339ee0239720 350 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 153 170 - T 12-10-2018 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 Vc3S01_A0840 9fba910e88b978cd531e339ee0239720 350 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 6 178 1.7E-66 T 12-10-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 Vc3S01_A0840 9fba910e88b978cd531e339ee0239720 350 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 187 349 4.6E-64 T 12-10-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 Vc3S01_2088 13d2d41d5969dfbdde65b59237ed7390 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.8E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_2088 13d2d41d5969dfbdde65b59237ed7390 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.8E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_2088 13d2d41d5969dfbdde65b59237ed7390 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.8E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_2088 13d2d41d5969dfbdde65b59237ed7390 324 SUPERFAMILY SSF53850 91 322 2.67E-43 T 12-10-2018 Vc3S01_2088 13d2d41d5969dfbdde65b59237ed7390 324 Gene3D G3DSA:3.40.190.10 93 303 1.2E-97 T 12-10-2018 Vc3S01_2088 13d2d41d5969dfbdde65b59237ed7390 324 Gene3D G3DSA:3.40.190.10 167 267 1.2E-97 T 12-10-2018 Vc3S01_2088 13d2d41d5969dfbdde65b59237ed7390 324 Gene3D G3DSA:1.10.10.10 1 86 5.4E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_2088 13d2d41d5969dfbdde65b59237ed7390 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 1.9E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_2088 13d2d41d5969dfbdde65b59237ed7390 324 SUPERFAMILY SSF46785 1 113 5.75E-14 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_2088 13d2d41d5969dfbdde65b59237ed7390 324 Pfam PF03466 LysR substrate binding domain 91 292 5.0E-40 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_0885 5930c1f27f3d9b398a3280f72e07a424 660 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 642 1.7E-255 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Vc3S01_0885 5930c1f27f3d9b398a3280f72e07a424 660 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 639 3.9E-126 T 12-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal Vc3S01_0885 5930c1f27f3d9b398a3280f72e07a424 660 Pfam PF01578 Cytochrome C assembly protein 89 297 2.5E-54 T 12-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 Vc3S01_0885 5930c1f27f3d9b398a3280f72e07a424 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 2.2E-95 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Vc3S01_0885 5930c1f27f3d9b398a3280f72e07a424 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 2.2E-95 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Vc3S01_0885 5930c1f27f3d9b398a3280f72e07a424 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 2.2E-95 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Vc3S01_0885 5930c1f27f3d9b398a3280f72e07a424 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 2.2E-95 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Vc3S01_0885 5930c1f27f3d9b398a3280f72e07a424 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 2.2E-95 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Vc3S01_0885 5930c1f27f3d9b398a3280f72e07a424 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 2.2E-95 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Vc3S01_0885 5930c1f27f3d9b398a3280f72e07a424 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 2.2E-95 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Vc3S01_0885 5930c1f27f3d9b398a3280f72e07a424 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 2.2E-95 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Vc3S01_0885 5930c1f27f3d9b398a3280f72e07a424 660 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 2.0E-63 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Vc3S01_0885 5930c1f27f3d9b398a3280f72e07a424 660 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 632 645 2.0E-63 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Vc3S01_0885 5930c1f27f3d9b398a3280f72e07a424 660 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 2.0E-63 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Vc3S01_0885 5930c1f27f3d9b398a3280f72e07a424 660 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 2.0E-63 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Vc3S01_0885 5930c1f27f3d9b398a3280f72e07a424 660 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 2.0E-63 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Vc3S01_0885 5930c1f27f3d9b398a3280f72e07a424 660 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 2.0E-63 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Vc3S01_0885 5930c1f27f3d9b398a3280f72e07a424 660 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 2.0E-63 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Vc3S01_A0812 32e3d93b9badb6f267ff482cac9f3eaf 667 SUPERFAMILY SSF50249 192 562 7.42E-109 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Vc3S01_A0812 32e3d93b9badb6f267ff482cac9f3eaf 667 SUPERFAMILY SSF50249 568 649 8.07E-20 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Vc3S01_A0812 32e3d93b9badb6f267ff482cac9f3eaf 667 TIGRFAM TIGR02062 RNase_B: exoribonuclease II 1 649 0.0 T 12-10-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 Vc3S01_A0812 32e3d93b9badb6f267ff482cac9f3eaf 667 Hamap MF_01036 Exoribonuclease 2 [rnb]. 1 650 42.476 T 12-10-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 Vc3S01_A0812 32e3d93b9badb6f267ff482cac9f3eaf 667 Gene3D G3DSA:2.40.50.140 565 651 1.8E-33 T 12-10-2018 Vc3S01_A0812 32e3d93b9badb6f267ff482cac9f3eaf 667 SMART SM00955 193 523 5.8E-114 T 12-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 Vc3S01_A0812 32e3d93b9badb6f267ff482cac9f3eaf 667 Gene3D G3DSA:2.40.50.640 83 157 1.4E-29 T 12-10-2018 Vc3S01_A0812 32e3d93b9badb6f267ff482cac9f3eaf 667 Pfam PF08206 Ribonuclease B OB domain 24 78 2.1E-16 T 12-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain Vc3S01_A0812 32e3d93b9badb6f267ff482cac9f3eaf 667 Gene3D G3DSA:2.40.50.140 1 82 1.5E-26 T 12-10-2018 Vc3S01_A0812 32e3d93b9badb6f267ff482cac9f3eaf 667 SMART SM00316 566 650 0.0017 T 12-10-2018 IPR022967 RNA-binding domain, S1 Vc3S01_A0812 32e3d93b9badb6f267ff482cac9f3eaf 667 Pfam PF00773 RNB domain 193 521 2.6E-85 T 12-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 Vc3S01_A0812 32e3d93b9badb6f267ff482cac9f3eaf 667 SUPERFAMILY SSF50249 8 80 3.83E-14 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Vc3S01_A0812 32e3d93b9badb6f267ff482cac9f3eaf 667 SUPERFAMILY SSF50249 84 173 1.56E-24 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Vc3S01_A0812 32e3d93b9badb6f267ff482cac9f3eaf 667 SMART SM00357 23 79 1.6E-8 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 Vc3S01_A0812 32e3d93b9badb6f267ff482cac9f3eaf 667 Pfam PF00575 S1 RNA binding domain 565 646 1.2E-9 T 12-10-2018 IPR003029 S1 domain GO:0003676 Vc3S01_A0812 32e3d93b9badb6f267ff482cac9f3eaf 667 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 6 648 2.5E-182 T 12-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 Vc3S01_A0812 32e3d93b9badb6f267ff482cac9f3eaf 667 ProSitePatterns PS01175 Ribonuclease II family signature. 490 514 - T 12-10-2018 IPR022966 Ribonuclease II/R, conserved site Vc3S01_A1450 d216f30ea65a498304df03af7dcfeb04 315 Pfam PF03595 Voltage-dependent anion channel 6 298 4.3E-27 T 12-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 Vc3S01_A1450 d216f30ea65a498304df03af7dcfeb04 315 Gene3D G3DSA:1.50.10.150 2 304 1.0E-32 T 12-10-2018 IPR038665 Voltage-dependent anion channel superfamily Vc3S01_0898 65ae27b188b2e6f7b245e462fda52681 154 PIRSF PIRSF000709 92 147 120.0 T 12-10-2018 Vc3S01_0898 65ae27b188b2e6f7b245e462fda52681 154 PIRSF PIRSF000709 1 89 2.0E-4 T 12-10-2018 Vc3S01_0898 65ae27b188b2e6f7b245e462fda52681 154 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 78 1.6E-10 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Vc3S01_0898 65ae27b188b2e6f7b245e462fda52681 154 SMART SM00855 2 116 2.8E-6 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Vc3S01_0898 65ae27b188b2e6f7b245e462fda52681 154 SUPERFAMILY SSF53254 1 144 8.44E-23 T 12-10-2018 IPR029033 Histidine phosphatase superfamily Vc3S01_0898 65ae27b188b2e6f7b245e462fda52681 154 Gene3D G3DSA:3.40.50.1240 1 154 1.8E-36 T 12-10-2018 IPR029033 Histidine phosphatase superfamily Vc3S01_0898 65ae27b188b2e6f7b245e462fda52681 154 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 154 1.0E-37 T 12-10-2018 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0101006 Vc3S01_A1834 a0cc41ea1e3c03ffaf957d0b5f8cd46d 535 Gene3D G3DSA:1.25.40.80 209 320 2.9E-15 T 12-10-2018 Vc3S01_A1834 a0cc41ea1e3c03ffaf957d0b5f8cd46d 535 Pfam PF03441 FAD binding domain of DNA photolyase 308 505 9.9E-57 T 12-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 Vc3S01_A1834 a0cc41ea1e3c03ffaf957d0b5f8cd46d 535 SUPERFAMILY SSF52425 46 236 3.92E-44 T 12-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 Vc3S01_A1834 a0cc41ea1e3c03ffaf957d0b5f8cd46d 535 Gene3D G3DSA:1.10.579.10 333 521 1.9E-58 T 12-10-2018 Vc3S01_A1834 a0cc41ea1e3c03ffaf957d0b5f8cd46d 535 SUPERFAMILY SSF48173 233 510 4.06E-79 T 12-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 Vc3S01_A1834 a0cc41ea1e3c03ffaf957d0b5f8cd46d 535 Gene3D G3DSA:3.40.50.620 43 172 1.5E-27 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Vc3S01_A1834 a0cc41ea1e3c03ffaf957d0b5f8cd46d 535 Pfam PF00875 DNA photolyase 48 176 1.2E-21 T 12-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 Vc3S01_A1834 a0cc41ea1e3c03ffaf957d0b5f8cd46d 535 PRINTS PR00147 DNA photolyase signature 358 374 2.9E-6 T 12-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 Vc3S01_A1834 a0cc41ea1e3c03ffaf957d0b5f8cd46d 535 PRINTS PR00147 DNA photolyase signature 378 396 2.9E-6 T 12-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 Vc3S01_A1834 a0cc41ea1e3c03ffaf957d0b5f8cd46d 535 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 358 370 - T 12-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal Vc3S01_A1185 8f7f25ce4481c1bb0d7d2c468d9e354f 507 SMART SM00642 27 417 6.4E-58 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Vc3S01_A1185 8f7f25ce4481c1bb0d7d2c468d9e354f 507 PIRSF PIRSF001021 3 507 1.2E-227 T 12-10-2018 IPR013776 Alpha-amylase, thermostable GO:0004553|GO:0005509|GO:0005975 KEGG: 00500+3.2.1.1 Vc3S01_A1185 8f7f25ce4481c1bb0d7d2c468d9e354f 507 Gene3D G3DSA:2.40.30.140 127 229 1.6E-156 T 12-10-2018 Vc3S01_A1185 8f7f25ce4481c1bb0d7d2c468d9e354f 507 Gene3D G3DSA:2.60.40.1180 423 506 4.2E-26 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta Vc3S01_A1185 8f7f25ce4481c1bb0d7d2c468d9e354f 507 Pfam PF00128 Alpha amylase, catalytic domain 56 356 9.4E-22 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Vc3S01_A1185 8f7f25ce4481c1bb0d7d2c468d9e354f 507 SUPERFAMILY SSF51445 28 393 8.8E-96 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily Vc3S01_A1185 8f7f25ce4481c1bb0d7d2c468d9e354f 507 SUPERFAMILY SSF51011 420 504 1.17E-30 T 12-10-2018 Vc3S01_A1185 8f7f25ce4481c1bb0d7d2c468d9e354f 507 Gene3D G3DSA:3.20.20.80 28 392 1.6E-156 T 12-10-2018 Vc3S01_2790 445ddf9851bdced8b6e255b5023fc2d9 206 Pfam PF04972 BON domain 107 172 1.6E-16 T 12-10-2018 IPR007055 BON domain Vc3S01_2790 445ddf9851bdced8b6e255b5023fc2d9 206 Pfam PF04972 BON domain 31 97 8.8E-13 T 12-10-2018 IPR007055 BON domain Vc3S01_2790 445ddf9851bdced8b6e255b5023fc2d9 206 SMART SM00749 112 175 8.4E-5 T 12-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria Vc3S01_2790 445ddf9851bdced8b6e255b5023fc2d9 206 SMART SM00749 35 98 27.0 T 12-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria Vc3S01_0264 3d890e04ad3c9655e64a2a3478efc906 345 Gene3D G3DSA:1.10.240.10 198 311 5.1E-137 T 12-10-2018 Vc3S01_0264 3d890e04ad3c9655e64a2a3478efc906 345 Pfam PF00579 tRNA synthetases class I (W and Y) 3 296 7.9E-76 T 12-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Vc3S01_0264 3d890e04ad3c9655e64a2a3478efc906 345 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 66 85 3.7E-26 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Vc3S01_0264 3d890e04ad3c9655e64a2a3478efc906 345 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 149 170 3.7E-26 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Vc3S01_0264 3d890e04ad3c9655e64a2a3478efc906 345 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 205 215 3.7E-26 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Vc3S01_0264 3d890e04ad3c9655e64a2a3478efc906 345 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 3.7E-26 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Vc3S01_0264 3d890e04ad3c9655e64a2a3478efc906 345 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 342 40.485 T 12-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 Vc3S01_0264 3d890e04ad3c9655e64a2a3478efc906 345 Gene3D G3DSA:3.40.50.620 5 340 5.1E-137 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Vc3S01_0264 3d890e04ad3c9655e64a2a3478efc906 345 SUPERFAMILY SSF52374 5 341 6.68E-89 T 12-10-2018 Vc3S01_0264 3d890e04ad3c9655e64a2a3478efc906 345 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 341 3.8E-107 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Vc3S01_A1881 30ee0ed0c1b4aa9ec168a26a1fd495bd 297 SUPERFAMILY SSF51658 6 290 1.8E-57 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily Vc3S01_A1881 30ee0ed0c1b4aa9ec168a26a1fd495bd 297 Gene3D G3DSA:3.20.20.150 1 290 1.7E-76 T 12-10-2018 Vc3S01_A1881 30ee0ed0c1b4aa9ec168a26a1fd495bd 297 TIGRFAM TIGR04379 myo_inos_iolE: myo-inosose-2 dehydratase 4 290 2.8E-127 T 12-10-2018 IPR030823 IolE/MocC family KEGG: 00562+4.2.1.44 Vc3S01_A1881 30ee0ed0c1b4aa9ec168a26a1fd495bd 297 Pfam PF01261 Xylose isomerase-like TIM barrel 32 245 8.6E-23 T 12-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain Vc3S01_3099 25721c50a5ee002e92bb73f222e5c656 259 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 166 180 - T 12-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 Vc3S01_3099 25721c50a5ee002e92bb73f222e5c656 259 SUPERFAMILY SSF53335 26 257 7.12E-53 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Vc3S01_3099 25721c50a5ee002e92bb73f222e5c656 259 Gene3D G3DSA:3.40.50.150 39 259 1.0E-74 T 12-10-2018 Vc3S01_3099 25721c50a5ee002e92bb73f222e5c656 259 Pfam PF01209 ubiE/COQ5 methyltransferase family 26 258 1.6E-102 T 12-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 Vc3S01_3099 25721c50a5ee002e92bb73f222e5c656 259 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 24 258 38.185 T 12-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 Vc3S01_3099 25721c50a5ee002e92bb73f222e5c656 259 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 33 258 9.7E-83 T 12-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 Vc3S01_3099 25721c50a5ee002e92bb73f222e5c656 259 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 44 59 - T 12-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 Vc3S01_A1774 eb0cad3f215c9a896aa39087849cb23c 270 SUPERFAMILY SSF52096 2 245 3.98E-47 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Vc3S01_A1774 eb0cad3f215c9a896aa39087849cb23c 270 Gene3D G3DSA:3.90.226.10 1 270 3.3E-56 T 12-10-2018 Vc3S01_A1774 eb0cad3f215c9a896aa39087849cb23c 270 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 96 116 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 Vc3S01_A1774 eb0cad3f215c9a896aa39087849cb23c 270 Pfam PF00378 Enoyl-CoA hydratase/isomerase 8 239 3.8E-33 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 Vc3S01_1085 77c5d2fd067ea2d079c61efb83645633 1038 SMART SM00316 34 116 1.1E-10 T 12-10-2018 IPR022967 RNA-binding domain, S1 Vc3S01_1085 77c5d2fd067ea2d079c61efb83645633 1038 Gene3D G3DSA:2.40.50.140 29 122 4.0E-32 T 12-10-2018 Vc3S01_1085 77c5d2fd067ea2d079c61efb83645633 1038 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 10 421 1.3E-170 T 12-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 Vc3S01_1085 77c5d2fd067ea2d079c61efb83645633 1038 Pfam PF10150 Ribonuclease E/G family 118 387 2.5E-94 T 12-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 Vc3S01_1085 77c5d2fd067ea2d079c61efb83645633 1038 SUPERFAMILY SSF50249 37 121 4.07E-19 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Vc3S01_1085 77c5d2fd067ea2d079c61efb83645633 1038 Hamap MF_00970 Ribonuclease E [rne]. 1 1025 35.988 T 12-10-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 Vc3S01_1085 77c5d2fd067ea2d079c61efb83645633 1038 Gene3D G3DSA:3.40.1260.20 397 505 9.7E-39 T 12-10-2018 Vc3S01_1085 77c5d2fd067ea2d079c61efb83645633 1038 Pfam PF00575 S1 RNA binding domain 34 115 5.2E-14 T 12-10-2018 IPR003029 S1 domain GO:0003676 Vc3S01_A1343 02f02bf6106ac425c6293f5990f87f1f 435 Pfam PF13584 Oxygen tolerance 68 299 7.3E-27 T 12-10-2018 IPR025738 Aerotolerance-related protein BatD Vc3S01_1208 58e6f8ebf0744bc01d1fac711b2c7538 312 Gene3D G3DSA:3.10.290.10 1 59 4.5E-20 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Vc3S01_1208 58e6f8ebf0744bc01d1fac711b2c7538 312 Gene3D G3DSA:3.30.70.580 70 228 7.5E-49 T 12-10-2018 Vc3S01_1208 58e6f8ebf0744bc01d1fac711b2c7538 312 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 72 232 5.4E-55 T 12-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 Vc3S01_1208 58e6f8ebf0744bc01d1fac711b2c7538 312 Pfam PF00849 RNA pseudouridylate synthase 68 185 6.3E-17 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Vc3S01_1208 58e6f8ebf0744bc01d1fac711b2c7538 312 Pfam PF01479 S4 domain 4 43 4.2E-11 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_1208 58e6f8ebf0744bc01d1fac711b2c7538 312 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 106 120 - T 12-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 Vc3S01_1208 58e6f8ebf0744bc01d1fac711b2c7538 312 SUPERFAMILY SSF55120 68 237 2.67E-42 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Vc3S01_1208 58e6f8ebf0744bc01d1fac711b2c7538 312 SMART SM00363 3 61 8.0E-10 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_1208 58e6f8ebf0744bc01d1fac711b2c7538 312 Gene3D G3DSA:3.30.70.1560 130 220 7.5E-49 T 12-10-2018 Vc3S01_1208 58e6f8ebf0744bc01d1fac711b2c7538 312 SUPERFAMILY SSF55174 4 96 8.07E-12 T 12-10-2018 Vc3S01_A0032 5a3aa0ccf6b5666a134292c4c3e5b6fd 181 SUPERFAMILY SSF82784 6 178 8.51E-34 T 12-10-2018 IPR036102 OsmC/Ohr superfamily Vc3S01_A0032 5a3aa0ccf6b5666a134292c4c3e5b6fd 181 Gene3D G3DSA:3.30.300.20 2 170 5.4E-41 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta Vc3S01_A0032 5a3aa0ccf6b5666a134292c4c3e5b6fd 181 Pfam PF02566 OsmC-like protein 74 177 4.5E-16 T 12-10-2018 IPR003718 OsmC/Ohr family Vc3S01_A1453 f869e61ef1a9997b6e091d4d8e65c445 217 SUPERFAMILY SSF55620 10 216 2.08E-74 T 12-10-2018 Vc3S01_A1453 f869e61ef1a9997b6e091d4d8e65c445 217 Gene3D G3DSA:3.30.1130.10 85 217 2.6E-52 T 12-10-2018 Vc3S01_A1453 f869e61ef1a9997b6e091d4d8e65c445 217 Pfam PF01227 GTP cyclohydrolase I 38 215 9.1E-64 T 12-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 Vc3S01_A1453 f869e61ef1a9997b6e091d4d8e65c445 217 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 38 216 1.8E-79 T 12-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 Vc3S01_A1453 f869e61ef1a9997b6e091d4d8e65c445 217 Gene3D G3DSA:1.10.286.10 1 84 4.3E-37 T 12-10-2018 Vc3S01_A1453 f869e61ef1a9997b6e091d4d8e65c445 217 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 96 112 - T 12-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 Vc3S01_A1453 f869e61ef1a9997b6e091d4d8e65c445 217 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 34 217 33.826 T 12-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 Vc3S01_A1453 f869e61ef1a9997b6e091d4d8e65c445 217 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 144 154 - T 12-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 Vc3S01_1994 5a29a82d9ed85ed872408b83f4228702 546 SUPERFAMILY SSF161098 13 253 2.75E-23 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_1994 5a29a82d9ed85ed872408b83f4228702 546 Gene3D G3DSA:1.10.3720.10 277 526 4.7E-20 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_1994 5a29a82d9ed85ed872408b83f4228702 546 Gene3D G3DSA:1.10.3720.10 1 257 1.3E-18 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_1994 5a29a82d9ed85ed872408b83f4228702 546 SUPERFAMILY SSF161098 279 518 1.4E-25 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_1164 2d16951c488180cbd3cd3fcd2597f214 180 Gene3D G3DSA:3.40.50.850 1 180 5.5E-49 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Vc3S01_1164 2d16951c488180cbd3cd3fcd2597f214 180 Pfam PF00857 Isochorismatase family 7 156 7.6E-30 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 Vc3S01_1164 2d16951c488180cbd3cd3fcd2597f214 180 SUPERFAMILY SSF52499 1 180 4.97E-47 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Vc3S01_A0651 b386113b5ffe685bbaa119d1e662aa2b 204 Pfam PF01810 LysE type translocator 15 202 2.2E-32 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Vc3S01_A0651 b386113b5ffe685bbaa119d1e662aa2b 204 PIRSF PIRSF006324 1 203 5.1E-42 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Vc3S01_A0502 ed2480849d646084cafa70c497c75ee4 499 SUPERFAMILY SSF56281 8 285 1.3E-52 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Vc3S01_A0502 ed2480849d646084cafa70c497c75ee4 499 Pfam PF00258 Flavodoxin 256 388 1.6E-11 T 12-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 Vc3S01_A0502 ed2480849d646084cafa70c497c75ee4 499 Pfam PF00753 Metallo-beta-lactamase superfamily 34 175 2.7E-9 T 12-10-2018 IPR001279 Metallo-beta-lactamase Vc3S01_A0502 ed2480849d646084cafa70c497c75ee4 499 PRINTS PR00163 Rubredoxin signature 448 464 1.3E-5 T 12-10-2018 IPR024935 Rubredoxin domain GO:0005506 Vc3S01_A0502 ed2480849d646084cafa70c497c75ee4 499 PRINTS PR00163 Rubredoxin signature 478 494 1.3E-5 T 12-10-2018 IPR024935 Rubredoxin domain GO:0005506 Vc3S01_A0502 ed2480849d646084cafa70c497c75ee4 499 SMART SM00849 34 209 1.1E-28 T 12-10-2018 IPR001279 Metallo-beta-lactamase Vc3S01_A0502 ed2480849d646084cafa70c497c75ee4 499 Hamap MF_01312 Anaerobic nitric oxide reductase flavorubredoxin [norV]. 1 498 75.097 T 12-10-2018 IPR023957 Anaerobic nitric oxide reductase flavorubredoxin GO:0005506|GO:0016966 Vc3S01_A0502 ed2480849d646084cafa70c497c75ee4 499 Gene3D G3DSA:2.20.28.10 447 499 8.0E-21 T 12-10-2018 Vc3S01_A0502 ed2480849d646084cafa70c497c75ee4 499 Gene3D G3DSA:3.40.50.360 253 395 9.0E-40 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Vc3S01_A0502 ed2480849d646084cafa70c497c75ee4 499 SUPERFAMILY SSF52218 251 398 1.61E-36 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Vc3S01_A0502 ed2480849d646084cafa70c497c75ee4 499 SUPERFAMILY SSF57802 446 498 5.89E-17 T 12-10-2018 Vc3S01_A0502 ed2480849d646084cafa70c497c75ee4 499 Pfam PF00301 Rubredoxin 449 494 4.7E-18 T 12-10-2018 IPR024935 Rubredoxin domain GO:0005506 Vc3S01_A0502 ed2480849d646084cafa70c497c75ee4 499 Gene3D G3DSA:3.60.15.10 1 247 1.3E-105 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Vc3S01_3186 a553b9bccd013ab4f236f30980cf6cc7 340 Gene3D G3DSA:1.10.510.10 72 270 2.2E-124 T 12-10-2018 Vc3S01_3186 a553b9bccd013ab4f236f30980cf6cc7 340 Hamap MF_01497 Stress response kinase A [srkA]. 16 330 47.062 T 12-10-2018 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 Vc3S01_3186 a553b9bccd013ab4f236f30980cf6cc7 340 Gene3D G3DSA:1.20.1270.170 161 319 2.2E-124 T 12-10-2018 Vc3S01_3186 a553b9bccd013ab4f236f30980cf6cc7 340 Gene3D G3DSA:3.30.200.70 25 120 2.2E-124 T 12-10-2018 Vc3S01_3186 a553b9bccd013ab4f236f30980cf6cc7 340 Pfam PF01636 Phosphotransferase enzyme family 48 268 9.2E-40 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase Vc3S01_3186 a553b9bccd013ab4f236f30980cf6cc7 340 SUPERFAMILY SSF56112 18 340 2.33E-89 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily Vc3S01_0894 f1f2672e892bcc1f337ebd0dfbc922cc 435 SUPERFAMILY SSF53901 12 291 3.51E-60 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 Vc3S01_0894 f1f2672e892bcc1f337ebd0dfbc922cc 435 TIGRFAM TIGR02446 FadI: acetyl-CoA C-acyltransferase FadI 6 435 2.6E-266 T 12-10-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 Vc3S01_0894 f1f2672e892bcc1f337ebd0dfbc922cc 435 SUPERFAMILY SSF53901 296 434 7.97E-31 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 Vc3S01_0894 f1f2672e892bcc1f337ebd0dfbc922cc 435 Pfam PF00108 Thiolase, N-terminal domain 14 286 5.8E-63 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 Vc3S01_0894 f1f2672e892bcc1f337ebd0dfbc922cc 435 ProSitePatterns PS00737 Thiolases signature 2. 381 397 - T 12-10-2018 IPR020613 Thiolase, conserved site GO:0016747 Vc3S01_0894 f1f2672e892bcc1f337ebd0dfbc922cc 435 Gene3D G3DSA:3.40.47.10 4 434 6.5E-110 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 Vc3S01_0894 f1f2672e892bcc1f337ebd0dfbc922cc 435 Pfam PF02803 Thiolase, C-terminal domain 295 433 2.3E-35 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 Vc3S01_0894 f1f2672e892bcc1f337ebd0dfbc922cc 435 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 16 433 2.3E-126 T 12-10-2018 IPR002155 Thiolase GO:0016747 Vc3S01_0894 f1f2672e892bcc1f337ebd0dfbc922cc 435 PIRSF PIRSF000429 8 435 1.6E-118 T 12-10-2018 IPR002155 Thiolase GO:0016747 Vc3S01_A0604 423e3242aad588abae02c5195880d78e 101 SUPERFAMILY SSF81296 11 96 2.05E-15 T 12-10-2018 IPR014756 Immunoglobulin E-set Vc3S01_A0604 423e3242aad588abae02c5195880d78e 101 Gene3D G3DSA:2.60.40.10 6 99 5.6E-18 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_A0604 423e3242aad588abae02c5195880d78e 101 SMART SM01065 12 93 0.0021 T 12-10-2018 IPR002044 Carbohydrate binding module family 20 GO:2001070 Vc3S01_2018 b729887126d0e5bfdb3fbe329ff159dd 77 Pfam PF06667 Phage shock protein B 3 74 9.7E-32 T 12-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 Vc3S01_2018 b729887126d0e5bfdb3fbe329ff159dd 77 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 1 75 1.0E-34 T 12-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 Vc3S01_2804 f22976792535fb141f5b7fb5ba961f6f 194 SUPERFAMILY SSF53474 5 192 2.8E-21 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_2804 f22976792535fb141f5b7fb5ba961f6f 194 Pfam PF05728 Uncharacterised protein family (UPF0227) 7 192 1.5E-69 T 12-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA Vc3S01_2804 f22976792535fb141f5b7fb5ba961f6f 194 Gene3D G3DSA:3.40.50.1820 6 194 4.2E-61 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_1053 70991b70abd81bceb605501dd92f4c40 158 SUPERFAMILY SSF55040 11 155 1.83E-61 T 12-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Vc3S01_1053 70991b70abd81bceb605501dd92f4c40 158 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 2 158 36.085 T 12-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Vc3S01_1053 70991b70abd81bceb605501dd92f4c40 158 Pfam PF01967 MoaC family 15 150 9.6E-56 T 12-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Vc3S01_1053 70991b70abd81bceb605501dd92f4c40 158 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 5.9E-72 T 12-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Vc3S01_1053 70991b70abd81bceb605501dd92f4c40 158 Gene3D G3DSA:3.30.70.640 1 158 7.1E-70 T 12-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Vc3S01_1831 8ef893b4fc78e434481c203713f418f2 339 Pfam PF13515 Fusaric acid resistance protein-like 194 324 6.5E-6 T 12-10-2018 Vc3S01_0307 400ef4f04e62b09659b9416625254648 263 SUPERFAMILY SSF53633 5 262 1.05E-58 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Vc3S01_0307 400ef4f04e62b09659b9416625254648 263 Pfam PF00696 Amino acid kinase family 9 238 2.8E-36 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Vc3S01_0307 400ef4f04e62b09659b9416625254648 263 Hamap MF_00082 Acetylglutamate kinase [argB]. 6 255 42.688 T 12-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Vc3S01_0307 400ef4f04e62b09659b9416625254648 263 Gene3D G3DSA:3.40.1160.10 4 260 2.7E-65 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Vc3S01_0307 400ef4f04e62b09659b9416625254648 263 PIRSF PIRSF000728 1 263 5.2E-70 T 12-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Vc3S01_0307 400ef4f04e62b09659b9416625254648 263 TIGRFAM TIGR00761 argB: acetylglutamate kinase 9 234 1.9E-63 T 12-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Vc3S01_1080 128e1726af531a2fd3eed0a9a2b92ec8 213 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 9 198 4.2E-41 T 12-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 Vc3S01_1080 128e1726af531a2fd3eed0a9a2b92ec8 213 TIGRFAM TIGR00235 udk: uridine kinase 3 211 2.4E-89 T 12-10-2018 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|Reactome: R-HSA-73614 Vc3S01_1080 128e1726af531a2fd3eed0a9a2b92ec8 213 Hamap MF_00551 Uridine kinase [udk]. 4 212 39.382 T 12-10-2018 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 Vc3S01_1080 128e1726af531a2fd3eed0a9a2b92ec8 213 SUPERFAMILY SSF52540 6 204 1.19E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_1080 128e1726af531a2fd3eed0a9a2b92ec8 213 Gene3D G3DSA:3.40.50.300 3 213 9.0E-61 T 12-10-2018 Vc3S01_1080 128e1726af531a2fd3eed0a9a2b92ec8 213 PRINTS PR00988 Uridine kinase signature 178 191 2.5E-36 T 12-10-2018 Vc3S01_1080 128e1726af531a2fd3eed0a9a2b92ec8 213 PRINTS PR00988 Uridine kinase signature 156 167 2.5E-36 T 12-10-2018 Vc3S01_1080 128e1726af531a2fd3eed0a9a2b92ec8 213 PRINTS PR00988 Uridine kinase signature 142 152 2.5E-36 T 12-10-2018 Vc3S01_1080 128e1726af531a2fd3eed0a9a2b92ec8 213 PRINTS PR00988 Uridine kinase signature 41 52 2.5E-36 T 12-10-2018 Vc3S01_1080 128e1726af531a2fd3eed0a9a2b92ec8 213 PRINTS PR00988 Uridine kinase signature 7 24 2.5E-36 T 12-10-2018 Vc3S01_1080 128e1726af531a2fd3eed0a9a2b92ec8 213 PRINTS PR00988 Uridine kinase signature 86 101 2.5E-36 T 12-10-2018 Vc3S01_A1860 34a86f48da8d0e32e282fe2b9f8b44ac 184 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 13 180 1.8E-61 T 12-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Vc3S01_A1860 34a86f48da8d0e32e282fe2b9f8b44ac 184 SUPERFAMILY SSF53955 11 181 7.87E-58 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily Vc3S01_A1860 34a86f48da8d0e32e282fe2b9f8b44ac 184 Pfam PF00912 Transglycosylase 11 176 2.2E-51 T 12-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Vc3S01_A1860 34a86f48da8d0e32e282fe2b9f8b44ac 184 Gene3D G3DSA:1.10.3810.10 7 183 2.5E-54 T 12-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Vc3S01_0013 1564e30ad35a5b91fa9dc902482c1480 427 Pfam PF01420 Type I restriction modification DNA specificity domain 222 388 3.0E-9 T 12-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 Vc3S01_0013 1564e30ad35a5b91fa9dc902482c1480 427 Pfam PF01420 Type I restriction modification DNA specificity domain 62 180 8.9E-6 T 12-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 Vc3S01_0013 1564e30ad35a5b91fa9dc902482c1480 427 SUPERFAMILY SSF116734 206 425 9.81E-39 T 12-10-2018 Vc3S01_0013 1564e30ad35a5b91fa9dc902482c1480 427 Gene3D G3DSA:3.90.220.20 226 371 1.1E-66 T 12-10-2018 Vc3S01_0013 1564e30ad35a5b91fa9dc902482c1480 427 SUPERFAMILY SSF116734 14 207 2.45E-27 T 12-10-2018 Vc3S01_0013 1564e30ad35a5b91fa9dc902482c1480 427 Gene3D G3DSA:1.10.287.1120 154 418 1.1E-66 T 12-10-2018 Vc3S01_0013 1564e30ad35a5b91fa9dc902482c1480 427 Gene3D G3DSA:3.90.220.20 65 422 1.1E-66 T 12-10-2018 Vc3S01_2026 80ff5889e6d1f74d47edbadc0d3aceeb 129 Pfam PF11042 Protein of unknown function (DUF2750) 23 122 9.0E-38 T 12-10-2018 IPR021284 Protein of unknown function DUF2750 Vc3S01_A0854 dc6683183e49c5b0b36b9b27b35f6881 347 Pfam PF01435 Peptidase family M48 132 317 1.1E-7 T 12-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 Vc3S01_1957 dfc3bbc452ad8f25e0276f50590b9bf7 208 SUPERFAMILY SSF46689 3 73 2.87E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_1957 dfc3bbc452ad8f25e0276f50590b9bf7 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 1.4E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Vc3S01_1957 dfc3bbc452ad8f25e0276f50590b9bf7 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 1.4E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Vc3S01_1957 dfc3bbc452ad8f25e0276f50590b9bf7 208 Gene3D G3DSA:1.10.357.10 2 208 1.2E-54 T 12-10-2018 Vc3S01_1957 dfc3bbc452ad8f25e0276f50590b9bf7 208 ProSitePatterns PS01081 TetR-type HTH domain signature. 23 54 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Vc3S01_1957 dfc3bbc452ad8f25e0276f50590b9bf7 208 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 57 1.1E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Vc3S01_1957 dfc3bbc452ad8f25e0276f50590b9bf7 208 SUPERFAMILY SSF48498 80 207 1.49E-41 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Vc3S01_1143 4abefa90ecfff955b478b432e92d0098 251 Pfam PF13649 Methyltransferase domain 43 136 7.6E-18 T 12-10-2018 Vc3S01_1143 4abefa90ecfff955b478b432e92d0098 251 Gene3D G3DSA:3.40.50.150 15 248 1.7E-41 T 12-10-2018 Vc3S01_1143 4abefa90ecfff955b478b432e92d0098 251 SUPERFAMILY SSF53335 15 250 1.23E-40 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Vc3S01_1143 4abefa90ecfff955b478b432e92d0098 251 Gene3D G3DSA:2.20.25.110 146 209 1.7E-41 T 12-10-2018 Vc3S01_0663 cb1611e3edea3309faee09c9ca576eb3 796 Pfam PF00577 Outer membrane usher protein 257 648 2.7E-12 T 12-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 Vc3S01_0663 cb1611e3edea3309faee09c9ca576eb3 796 Gene3D G3DSA:2.60.40.3110 251 322 1.6E-5 T 12-10-2018 Vc3S01_A1023 12199ec2999c8921a913dac4082ce603 126 Pfam PF01597 Glycine cleavage H-protein 5 125 7.9E-50 T 12-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate Vc3S01_A1023 12199ec2999c8921a913dac4082ce603 126 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 2 124 41.44 T 12-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 Vc3S01_A1023 12199ec2999c8921a913dac4082ce603 126 Gene3D G3DSA:2.40.50.100 1 126 8.2E-51 T 12-10-2018 Vc3S01_A1023 12199ec2999c8921a913dac4082ce603 126 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 125 1.2E-51 T 12-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 Vc3S01_A1023 12199ec2999c8921a913dac4082ce603 126 SUPERFAMILY SSF51230 3 125 1.44E-45 T 12-10-2018 IPR011053 Single hybrid motif Vc3S01_2740 32ba0036e381c62a5b6976431726032e 295 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 78 86 - T 12-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 Vc3S01_2740 32ba0036e381c62a5b6976431726032e 295 Gene3D G3DSA:3.20.20.150 10 293 3.2E-113 T 12-10-2018 Vc3S01_2740 32ba0036e381c62a5b6976431726032e 295 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 12 286 5.2E-108 T 12-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 Vc3S01_2740 32ba0036e381c62a5b6976431726032e 295 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 224 240 - T 12-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 Vc3S01_2740 32ba0036e381c62a5b6976431726032e 295 Hamap MF_00152 Probable endonuclease 4 [nfo]. 11 288 42.695 T 12-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 Vc3S01_2740 32ba0036e381c62a5b6976431726032e 295 Pfam PF01261 Xylose isomerase-like TIM barrel 29 248 1.3E-42 T 12-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain Vc3S01_2740 32ba0036e381c62a5b6976431726032e 295 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 184 191 - T 12-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 Vc3S01_2740 32ba0036e381c62a5b6976431726032e 295 SUPERFAMILY SSF51658 12 287 1.23E-100 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily Vc3S01_2740 32ba0036e381c62a5b6976431726032e 295 SMART SM00518 12 288 5.1E-125 T 12-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 Vc3S01_2183 35801692026aa4d2fe248240d367fa68 347 Gene3D G3DSA:3.40.50.720 112 233 3.2E-11 T 12-10-2018 Vc3S01_2183 35801692026aa4d2fe248240d367fa68 347 SUPERFAMILY SSF81324 4 132 2.88E-17 T 12-10-2018 Vc3S01_2183 35801692026aa4d2fe248240d367fa68 347 SUPERFAMILY SSF51735 121 239 5.91E-11 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_2183 35801692026aa4d2fe248240d367fa68 347 Pfam PF07885 Ion channel 29 99 3.7E-14 T 12-10-2018 IPR013099 Potassium channel domain Vc3S01_2183 35801692026aa4d2fe248240d367fa68 347 Gene3D G3DSA:1.10.287.70 20 101 1.4E-12 T 12-10-2018 Vc3S01_2838 1370370e41db1c29b1e54fc86adc085a 176 Gene3D G3DSA:1.20.120.330 1 172 4.0E-71 T 12-10-2018 Vc3S01_2838 1370370e41db1c29b1e54fc86adc085a 176 Pfam PF05068 Mannitol repressor 7 170 5.3E-61 T 12-10-2018 IPR007761 Mannitol repressor MtlR-like Vc3S01_2838 1370370e41db1c29b1e54fc86adc085a 176 SUPERFAMILY SSF158668 4 170 5.1E-58 T 12-10-2018 IPR038026 MtlR-like superfamily Vc3S01_0539 84478de520e13c85d4054d4cf84fd9d1 65 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 58 4.4E-30 T 12-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 Vc3S01_0539 84478de520e13c85d4054d4cf84fd9d1 65 Gene3D G3DSA:3.30.70.1680 1 59 8.5E-30 T 12-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 Vc3S01_0539 84478de520e13c85d4054d4cf84fd9d1 65 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 4.0E-20 T 12-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 Vc3S01_0539 84478de520e13c85d4054d4cf84fd9d1 65 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 63 17.074 T 12-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 Vc3S01_0539 84478de520e13c85d4054d4cf84fd9d1 65 SUPERFAMILY SSF117130 1 54 6.93E-21 T 12-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 Vc3S01_0539 84478de520e13c85d4054d4cf84fd9d1 65 Pfam PF02599 Global regulator protein family 1 52 2.0E-26 T 12-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 Vc3S01_0638 7266f1791cbc3efe40c0b86f4ce16663 296 Pfam PF01136 Peptidase family U32 85 239 2.3E-12 T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 Vc3S01_3159 832e1a8c82c0841f741cafb8ace867a8 494 SUPERFAMILY SSF48179 210 341 4.42E-39 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Vc3S01_3159 832e1a8c82c0841f741cafb8ace867a8 494 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 35 367 3.8E-125 T 12-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Vc3S01_3159 832e1a8c82c0841f741cafb8ace867a8 494 Gene3D G3DSA:3.40.50.720 1 208 9.3E-87 T 12-10-2018 Vc3S01_3159 832e1a8c82c0841f741cafb8ace867a8 494 Gene3D G3DSA:1.10.1040.10 209 494 1.8E-120 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Vc3S01_3159 832e1a8c82c0841f741cafb8ace867a8 494 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 22 488 36.944 T 12-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Vc3S01_3159 832e1a8c82c0841f741cafb8ace867a8 494 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 355 485 7.4E-17 T 12-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Vc3S01_3159 832e1a8c82c0841f741cafb8ace867a8 494 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 210 341 3.4E-25 T 12-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Vc3S01_3159 832e1a8c82c0841f741cafb8ace867a8 494 SUPERFAMILY SSF48179 348 487 9.18E-43 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Vc3S01_3159 832e1a8c82c0841f741cafb8ace867a8 494 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 35 204 1.2E-59 T 12-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Vc3S01_3159 832e1a8c82c0841f741cafb8ace867a8 494 SUPERFAMILY SSF51735 29 209 1.47E-57 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_2287 4cffa8a32476da0ea3ef2fa7492ff9c9 244 Gene3D G3DSA:3.40.1280.10 96 244 9.4E-40 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Vc3S01_2287 4cffa8a32476da0ea3ef2fa7492ff9c9 244 Pfam PF00588 SpoU rRNA Methylase family 102 236 9.1E-29 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 Vc3S01_2287 4cffa8a32476da0ea3ef2fa7492ff9c9 244 Gene3D G3DSA:3.30.1330.30 1 94 9.6E-18 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like Vc3S01_2287 4cffa8a32476da0ea3ef2fa7492ff9c9 244 SUPERFAMILY SSF55315 4 93 5.89E-13 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like Vc3S01_2287 4cffa8a32476da0ea3ef2fa7492ff9c9 244 SUPERFAMILY SSF75217 96 243 1.5E-33 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases Vc3S01_1620 be981773dfe0e79da810c3daa5dc2e7b 160 Gene3D G3DSA:3.30.70.990 9 94 1.2E-27 T 12-10-2018 IPR035570 UPF0234, N-terminal Vc3S01_1620 be981773dfe0e79da810c3daa5dc2e7b 160 SUPERFAMILY SSF89963 2 86 7.85E-31 T 12-10-2018 IPR036183 YajQ-like superfamily Vc3S01_1620 be981773dfe0e79da810c3daa5dc2e7b 160 SUPERFAMILY SSF89963 88 160 1.33E-28 T 12-10-2018 IPR036183 YajQ-like superfamily Vc3S01_1620 be981773dfe0e79da810c3daa5dc2e7b 160 Gene3D G3DSA:3.30.70.860 95 160 2.9E-30 T 12-10-2018 IPR035571 UPF0234-like, C-terminal Vc3S01_1620 be981773dfe0e79da810c3daa5dc2e7b 160 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 160 29.699 T 12-10-2018 IPR007551 Protein of unknown function DUF520 Vc3S01_1620 be981773dfe0e79da810c3daa5dc2e7b 160 Pfam PF04461 Protein of unknown function (DUF520) 2 159 3.0E-65 T 12-10-2018 IPR007551 Protein of unknown function DUF520 Vc3S01_1735 589ec3400a458c170afc3cfcfe0dc9fe 129 Gene3D G3DSA:3.40.50.300 4 129 1.3E-27 T 12-10-2018 Vc3S01_1735 589ec3400a458c170afc3cfcfe0dc9fe 129 SUPERFAMILY SSF52540 5 104 3.93E-17 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_1735 589ec3400a458c170afc3cfcfe0dc9fe 129 Pfam PF13671 AAA domain 6 106 9.3E-17 T 12-10-2018 Vc3S01_2456 0f1dc1b3fb5c270b4595c424437b7b6b 85 Gene3D G3DSA:3.30.1340.10 1 85 8.4E-32 T 12-10-2018 IPR035895 HPr-like superfamily Vc3S01_2456 0f1dc1b3fb5c270b4595c424437b7b6b 85 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 12-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site Vc3S01_2456 0f1dc1b3fb5c270b4595c424437b7b6b 85 SUPERFAMILY SSF55594 1 82 1.96E-26 T 12-10-2018 IPR035895 HPr-like superfamily Vc3S01_2456 0f1dc1b3fb5c270b4595c424437b7b6b 85 Pfam PF00381 PTS HPr component phosphorylation site 3 82 9.7E-27 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like Vc3S01_2456 0f1dc1b3fb5c270b4595c424437b7b6b 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 3.6E-27 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like Vc3S01_2456 0f1dc1b3fb5c270b4595c424437b7b6b 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 12-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site Vc3S01_2456 0f1dc1b3fb5c270b4595c424437b7b6b 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 9.6E-18 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like Vc3S01_2456 0f1dc1b3fb5c270b4595c424437b7b6b 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 9.6E-18 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like Vc3S01_2456 0f1dc1b3fb5c270b4595c424437b7b6b 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 9.6E-18 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like Vc3S01_A0892 9319cf32e0d394f483e78013934ccd06 486 SUPERFAMILY SSF53720 5 484 5.76E-148 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Vc3S01_A0892 9319cf32e0d394f483e78013934ccd06 486 Pfam PF00171 Aldehyde dehydrogenase family 24 480 7.9E-149 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Vc3S01_A0892 9319cf32e0d394f483e78013934ccd06 486 Gene3D G3DSA:3.40.309.10 260 452 7.4E-148 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Vc3S01_A0892 9319cf32e0d394f483e78013934ccd06 486 Gene3D G3DSA:3.40.605.10 19 476 7.4E-148 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Vc3S01_2458 0133d767e66fca4549a54aaadc292572 169 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 23 143 2.5E-50 T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 Vc3S01_2458 0133d767e66fca4549a54aaadc292572 169 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 22 146 3.3E-49 T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 Vc3S01_2458 0133d767e66fca4549a54aaadc292572 169 SUPERFAMILY SSF51261 18 166 3.84E-55 T 12-10-2018 IPR011055 Duplicated hybrid motif Vc3S01_2458 0133d767e66fca4549a54aaadc292572 169 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 85 97 - T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 Vc3S01_2458 0133d767e66fca4549a54aaadc292572 169 Gene3D G3DSA:2.70.70.10 9 169 5.2E-62 T 12-10-2018 IPR011055 Duplicated hybrid motif Vc3S01_2807 f2a1f921c2ef09f2cdcc69f5ac42e43e 216 SUPERFAMILY SSF55811 10 204 9.07E-46 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Vc3S01_2807 f2a1f921c2ef09f2cdcc69f5ac42e43e 216 Pfam PF00293 NUDIX domain 58 175 2.2E-10 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Vc3S01_2807 f2a1f921c2ef09f2cdcc69f5ac42e43e 216 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 14 198 2.1E-65 T 12-10-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 Vc3S01_2807 f2a1f921c2ef09f2cdcc69f5ac42e43e 216 ProSitePatterns PS00893 Nudix box signature. 96 117 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Vc3S01_2807 f2a1f921c2ef09f2cdcc69f5ac42e43e 216 Gene3D G3DSA:3.90.79.10 1 208 1.3E-63 T 12-10-2018 Vc3S01_1130 75aaed6b3df490cc156606de1f49343d 233 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 57 70 - T 12-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Vc3S01_1130 75aaed6b3df490cc156606de1f49343d 233 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 6 226 4.6E-58 T 12-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Vc3S01_1130 75aaed6b3df490cc156606de1f49343d 233 SMART SM00934 5 226 1.1E-101 T 12-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Vc3S01_1130 75aaed6b3df490cc156606de1f49343d 233 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 225 1.4E-51 T 12-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Vc3S01_1130 75aaed6b3df490cc156606de1f49343d 233 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 3 231 40.499 T 12-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Vc3S01_1130 75aaed6b3df490cc156606de1f49343d 233 SUPERFAMILY SSF51366 1 228 2.18E-77 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Vc3S01_1130 75aaed6b3df490cc156606de1f49343d 233 Gene3D G3DSA:3.20.20.70 2 230 8.7E-86 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_1406 5abecada5dc6c0622742af0e1b499875 445 Gene3D G3DSA:2.60.120.10 4 130 1.3E-12 T 12-10-2018 IPR014710 RmlC-like jelly roll fold Vc3S01_1406 5abecada5dc6c0622742af0e1b499875 445 SMART SM00100 1 121 5.3E-4 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain Vc3S01_1406 5abecada5dc6c0622742af0e1b499875 445 SUPERFAMILY SSF51206 6 134 3.8E-16 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like Vc3S01_1406 5abecada5dc6c0622742af0e1b499875 445 SMART SM00387 329 440 1.9E-22 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_1406 5abecada5dc6c0622742af0e1b499875 445 Pfam PF00027 Cyclic nucleotide-binding domain 21 100 1.1E-10 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain Vc3S01_1406 5abecada5dc6c0622742af0e1b499875 445 Gene3D G3DSA:1.10.287.130 131 223 5.1E-10 T 12-10-2018 Vc3S01_1406 5abecada5dc6c0622742af0e1b499875 445 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 330 439 4.1E-16 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_1406 5abecada5dc6c0622742af0e1b499875 445 Gene3D G3DSA:3.30.565.10 290 444 4.1E-31 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_1406 5abecada5dc6c0622742af0e1b499875 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 396 5.4E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_1406 5abecada5dc6c0622742af0e1b499875 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 382 5.4E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_1406 5abecada5dc6c0622742af0e1b499875 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 419 5.4E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_1406 5abecada5dc6c0622742af0e1b499875 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 437 5.4E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_1406 5abecada5dc6c0622742af0e1b499875 445 SUPERFAMILY SSF55874 297 437 1.31E-27 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_A1607 7c749d9e7907bb8b703d045da9258137 106 Pfam PF05036 Sporulation related domain 15 89 5.6E-13 T 12-10-2018 IPR007730 Sporulation-like domain GO:0042834 Vc3S01_A1607 7c749d9e7907bb8b703d045da9258137 106 SUPERFAMILY SSF110997 15 80 7.06E-6 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Vc3S01_A1607 7c749d9e7907bb8b703d045da9258137 106 Gene3D G3DSA:3.30.70.1070 4 97 1.8E-20 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Vc3S01_2688 7daa5f282741d25ffe756b238e32d0ff 183 SUPERFAMILY SSF52972 10 179 1.44E-61 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Vc3S01_2688 7daa5f282741d25ffe756b238e32d0ff 183 Hamap MF_00648 Non-canonical purine NTP phosphatase. 10 179 30.767 T 12-10-2018 IPR002786 Non-canonical purine NTP phosphatase Vc3S01_2688 7daa5f282741d25ffe756b238e32d0ff 183 TIGRFAM TIGR00258 TIGR00258: inosine/xanthosine triphosphatase 14 178 1.9E-47 T 12-10-2018 IPR002786 Non-canonical purine NTP phosphatase Vc3S01_2688 7daa5f282741d25ffe756b238e32d0ff 183 Pfam PF01931 Protein of unknown function DUF84 15 173 9.6E-59 T 12-10-2018 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 Vc3S01_2688 7daa5f282741d25ffe756b238e32d0ff 183 Gene3D G3DSA:3.90.950.10 3 182 5.2E-70 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Vc3S01_A1967 ed5919b7e89e42074d8f767e12cc787d 374 Pfam PF17186 Lipocalin-like domain 252 374 1.6E-41 T 12-10-2018 Vc3S01_A1967 ed5919b7e89e42074d8f767e12cc787d 374 Pfam PF07143 CrtC N-terminal lipocalin domain 72 247 4.5E-55 T 12-10-2018 IPR010791 AttH domain Vc3S01_A1967 ed5919b7e89e42074d8f767e12cc787d 374 Gene3D G3DSA:2.40.370.10 252 374 1.4E-31 T 12-10-2018 IPR023374 AttH-like domain superfamily Vc3S01_A1967 ed5919b7e89e42074d8f767e12cc787d 374 Gene3D G3DSA:2.40.370.10 60 250 2.4E-66 T 12-10-2018 IPR023374 AttH-like domain superfamily Vc3S01_A1967 ed5919b7e89e42074d8f767e12cc787d 374 SUPERFAMILY SSF159245 49 374 5.23E-104 T 12-10-2018 Vc3S01_2706 4378c710d08cf715fbb07854bf2b578a 143 Gene3D G3DSA:2.40.10.330 72 128 4.2E-43 T 12-10-2018 Vc3S01_2706 4378c710d08cf715fbb07854bf2b578a 143 Gene3D G3DSA:3.10.50.40 13 140 4.2E-43 T 12-10-2018 Vc3S01_2706 4378c710d08cf715fbb07854bf2b578a 143 SUPERFAMILY SSF54534 4 142 3.34E-37 T 12-10-2018 Vc3S01_2706 4378c710d08cf715fbb07854bf2b578a 143 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 139 2.7E-13 T 12-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain Vc3S01_2516 a1cf39cdd74c67ed3e9f533e77ad1e47 299 Gene3D G3DSA:3.30.465.10 204 296 4.6E-31 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Vc3S01_2516 a1cf39cdd74c67ed3e9f533e77ad1e47 299 SUPERFAMILY SSF54631 65 206 1.22E-33 T 12-10-2018 Vc3S01_2516 a1cf39cdd74c67ed3e9f533e77ad1e47 299 Pfam PF00571 CBS domain 75 132 1.7E-8 T 12-10-2018 IPR000644 CBS domain Vc3S01_2516 a1cf39cdd74c67ed3e9f533e77ad1e47 299 Pfam PF00571 CBS domain 145 195 1.6E-6 T 12-10-2018 IPR000644 CBS domain Vc3S01_2516 a1cf39cdd74c67ed3e9f533e77ad1e47 299 Gene3D G3DSA:3.10.580.10 57 203 1.8E-54 T 12-10-2018 Vc3S01_2516 a1cf39cdd74c67ed3e9f533e77ad1e47 299 SMART SM00116 84 133 0.0024 T 12-10-2018 IPR000644 CBS domain Vc3S01_2516 a1cf39cdd74c67ed3e9f533e77ad1e47 299 SMART SM00116 147 195 0.028 T 12-10-2018 IPR000644 CBS domain Vc3S01_2516 a1cf39cdd74c67ed3e9f533e77ad1e47 299 SUPERFAMILY SSF56176 209 291 1.72E-22 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Vc3S01_2516 a1cf39cdd74c67ed3e9f533e77ad1e47 299 Pfam PF03471 Transporter associated domain 212 287 4.2E-22 T 12-10-2018 IPR005170 Transporter-associated domain Vc3S01_2516 a1cf39cdd74c67ed3e9f533e77ad1e47 299 SMART SM01091 211 289 1.7E-29 T 12-10-2018 IPR005170 Transporter-associated domain Vc3S01_2672 728d6dc44c9a533e6304b5a3980c2835 304 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 1 301 39.104 T 12-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 Vc3S01_2672 728d6dc44c9a533e6304b5a3980c2835 304 Pfam PF04381 Putative exonuclease, RdgC 1 298 1.7E-125 T 12-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 Vc3S01_0766 f07aa6471a7f0958d5913e99a0adc81c 231 Gene3D G3DSA:2.40.30.70 1 139 9.9E-43 T 12-10-2018 IPR036414 YaeB, N-terminal domain superfamily Vc3S01_0766 f07aa6471a7f0958d5913e99a0adc81c 231 SUPERFAMILY SSF118196 1 226 7.32E-79 T 12-10-2018 IPR036413 YaeB-like superfamily Vc3S01_0766 f07aa6471a7f0958d5913e99a0adc81c 231 Gene3D G3DSA:3.30.2310.10 140 227 5.5E-21 T 12-10-2018 Vc3S01_0766 f07aa6471a7f0958d5913e99a0adc81c 231 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 2 147 1.2E-47 T 12-10-2018 IPR023370 YaeB-like, N-terminal domain Vc3S01_0766 f07aa6471a7f0958d5913e99a0adc81c 231 Pfam PF01980 Uncharacterised protein family UPF0066 19 141 1.0E-39 T 12-10-2018 IPR023370 YaeB-like, N-terminal domain Vc3S01_0766 f07aa6471a7f0958d5913e99a0adc81c 231 ProSitePatterns PS01318 TsaA-like domain signature. 85 96 - T 12-10-2018 IPR023368 Uncharacterised protein family UPF0066, conserved site Vc3S01_2785 797877bbd09d6e51ffd465c09985d28e 316 Gene3D G3DSA:1.10.150.170 112 218 1.9E-100 T 12-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 Vc3S01_2785 797877bbd09d6e51ffd465c09985d28e 316 PIRSF PIRSF004486 1 316 1.3E-100 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Vc3S01_2785 797877bbd09d6e51ffd465c09985d28e 316 SUPERFAMILY SSF81799 113 216 6.41E-31 T 12-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 Vc3S01_2785 797877bbd09d6e51ffd465c09985d28e 316 Gene3D G3DSA:3.40.50.150 10 315 1.9E-100 T 12-10-2018 Vc3S01_2785 797877bbd09d6e51ffd465c09985d28e 316 Pfam PF01795 MraW methylase family 5 315 8.8E-109 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Vc3S01_2785 797877bbd09d6e51ffd465c09985d28e 316 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 316 37.603 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Vc3S01_2785 797877bbd09d6e51ffd465c09985d28e 316 SUPERFAMILY SSF53335 7 316 2.9E-43 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Vc3S01_2785 797877bbd09d6e51ffd465c09985d28e 316 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 2 315 1.6E-117 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Vc3S01_0558 146118abadced91de2aa3c5e5b1983f3 64 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 3 59 18.179 T 12-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 Vc3S01_0558 146118abadced91de2aa3c5e5b1983f3 64 Pfam PF03884 DNA gyrase inhibitor YacG 7 57 2.7E-23 T 12-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 Vc3S01_0558 146118abadced91de2aa3c5e5b1983f3 64 Gene3D G3DSA:3.30.50.10 1 64 6.0E-24 T 12-10-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 Reactome: R-HSA-383280 Vc3S01_0558 146118abadced91de2aa3c5e5b1983f3 64 SUPERFAMILY SSF57716 2 62 2.42E-20 T 12-10-2018 Vc3S01_A0844 50d0efd9dc90bd33ef6a423cd59888f9 807 Gene3D G3DSA:3.40.50.300 194 369 1.0E-8 T 12-10-2018 Vc3S01_A0844 50d0efd9dc90bd33ef6a423cd59888f9 807 SUPERFAMILY SSF52540 188 299 7.72E-10 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A0844 50d0efd9dc90bd33ef6a423cd59888f9 807 Pfam PF04851 Type III restriction enzyme, res subunit 195 298 1.8E-5 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Vc3S01_A0322 cd299b5d6176fedcf02b8d97bf8da78f 261 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 258 3.0E-27 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Vc3S01_A0322 cd299b5d6176fedcf02b8d97bf8da78f 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 136 3.9E-46 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Vc3S01_A0322 cd299b5d6176fedcf02b8d97bf8da78f 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 148 243 7.3E-33 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Vc3S01_A0322 cd299b5d6176fedcf02b8d97bf8da78f 261 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site Vc3S01_A0322 cd299b5d6176fedcf02b8d97bf8da78f 261 Pfam PF00460 Flagella basal body rod protein 5 35 4.6E-11 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Vc3S01_A0322 cd299b5d6176fedcf02b8d97bf8da78f 261 SUPERFAMILY SSF117143 93 222 1.44E-36 T 12-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like Vc3S01_A0322 cd299b5d6176fedcf02b8d97bf8da78f 261 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 260 4.2E-118 T 12-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 Vc3S01_A0794 a0da2dac154a93c983fe47ce3f19e7cf 182 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 176 8.6E-43 T 12-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain Vc3S01_A0794 a0da2dac154a93c983fe47ce3f19e7cf 182 Gene3D G3DSA:3.40.50.300 2 180 4.9E-46 T 12-10-2018 Vc3S01_A0794 a0da2dac154a93c983fe47ce3f19e7cf 182 SUPERFAMILY SSF52540 5 170 7.58E-27 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A1610 21512681dd62a5d100bd0842138d7f87 535 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 74 521 1.1E-136 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 Vc3S01_A1610 21512681dd62a5d100bd0842138d7f87 535 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 33 520 5.8E-170 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 Vc3S01_A1610 21512681dd62a5d100bd0842138d7f87 535 ProSitePatterns PS01303 BCCT family of transporters signature. 336 345 - T 12-10-2018 IPR018093 BCCT transporter, conserved site Vc3S01_1929 19dde9f061858a544a2a435e2fb9c3f6 443 SUPERFAMILY SSF53686 96 431 2.06E-51 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Vc3S01_1929 19dde9f061858a544a2a435e2fb9c3f6 443 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 76 396 5.4E-58 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Vc3S01_1929 19dde9f061858a544a2a435e2fb9c3f6 443 Gene3D G3DSA:3.40.50.1100 24 438 1.9E-195 T 12-10-2018 Vc3S01_1929 19dde9f061858a544a2a435e2fb9c3f6 443 TIGRFAM TIGR02035 D_Ser_am_lyase: D-serine ammonia-lyase 10 438 3.1E-224 T 12-10-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 Vc3S01_1929 19dde9f061858a544a2a435e2fb9c3f6 443 Hamap MF_01030 D-serine dehydratase [dsdA]. 1 443 271.897 T 12-10-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 Vc3S01_1929 19dde9f061858a544a2a435e2fb9c3f6 443 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 108 122 - T 12-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 Vc3S01_1929 19dde9f061858a544a2a435e2fb9c3f6 443 Gene3D G3DSA:3.40.50.1100 116 238 1.9E-195 T 12-10-2018 Vc3S01_p40099 7b27b848c04a7e5ded4113a044eb6d7f 223 PRINTS PR01021 OMPA domain signature 168 184 2.1E-8 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Vc3S01_p40099 7b27b848c04a7e5ded4113a044eb6d7f 223 PRINTS PR01021 OMPA domain signature 121 143 2.1E-8 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Vc3S01_p40099 7b27b848c04a7e5ded4113a044eb6d7f 223 PRINTS PR01021 OMPA domain signature 153 168 2.1E-8 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Vc3S01_p40099 7b27b848c04a7e5ded4113a044eb6d7f 223 SUPERFAMILY SSF103088 113 210 8.5E-19 T 12-10-2018 IPR036737 OmpA-like domain superfamily Vc3S01_p40099 7b27b848c04a7e5ded4113a044eb6d7f 223 Pfam PF00691 OmpA family 121 212 8.4E-18 T 12-10-2018 IPR006665 OmpA-like domain Vc3S01_p40099 7b27b848c04a7e5ded4113a044eb6d7f 223 Gene3D G3DSA:3.30.1330.60 103 223 8.0E-21 T 12-10-2018 IPR036737 OmpA-like domain superfamily Vc3S01_2388 64e8c02f8a58d275b8663131684e6cb3 758 SUPERFAMILY SSF52540 4 191 1.0E-38 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2388 64e8c02f8a58d275b8663131684e6cb3 758 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 9 687 7.1E-180 T 12-10-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 Vc3S01_2388 64e8c02f8a58d275b8663131684e6cb3 758 Pfam PF07670 Nucleoside recognition 349 440 2.1E-13 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 Vc3S01_2388 64e8c02f8a58d275b8663131684e6cb3 758 Pfam PF07670 Nucleoside recognition 509 691 1.9E-36 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 Vc3S01_2388 64e8c02f8a58d275b8663131684e6cb3 758 Pfam PF07664 Ferrous iron transport protein B C terminus 452 504 9.5E-19 T 12-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 Vc3S01_2388 64e8c02f8a58d275b8663131684e6cb3 758 Gene3D G3DSA:3.40.50.300 4 203 4.4E-43 T 12-10-2018 Vc3S01_2388 64e8c02f8a58d275b8663131684e6cb3 758 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 151 3.0E-12 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Vc3S01_2388 64e8c02f8a58d275b8663131684e6cb3 758 Pfam PF02421 Ferrous iron transport protein B 4 161 3.0E-58 T 12-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 Vc3S01_3086 29950a36f8a4c37c194eaf83f8ff0275 219 SUPERFAMILY SSF52540 6 197 7.65E-34 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_3086 29950a36f8a4c37c194eaf83f8ff0275 219 Pfam PF01926 50S ribosome-binding GTPase 29 147 1.9E-20 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Vc3S01_3086 29950a36f8a4c37c194eaf83f8ff0275 219 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 15 198 27.634 T 12-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 Vc3S01_3086 29950a36f8a4c37c194eaf83f8ff0275 219 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 11 194 1.9E-74 T 12-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 Vc3S01_3086 29950a36f8a4c37c194eaf83f8ff0275 219 Gene3D G3DSA:3.40.50.300 3 202 2.0E-58 T 12-10-2018 Vc3S01_A1921 f9b781809e2bb40e40e4de88df0f4dfa 510 SUPERFAMILY SSF103473 5 187 4.45E-10 T 12-10-2018 IPR036259 MFS transporter superfamily Vc3S01_A1921 f9b781809e2bb40e40e4de88df0f4dfa 510 Gene3D G3DSA:1.20.1250.20 2 186 5.1E-8 T 12-10-2018 Vc3S01_A1132 6e4fe05db4b3c86acdf881b66f92b35f 285 SUPERFAMILY SSF51215 28 160 1.83E-18 T 12-10-2018 IPR037923 Transcription regulator HTH-like Vc3S01_A1132 6e4fe05db4b3c86acdf881b66f92b35f 285 Gene3D G3DSA:1.10.10.60 171 282 2.0E-26 T 12-10-2018 Vc3S01_A1132 6e4fe05db4b3c86acdf881b66f92b35f 285 Pfam PF02311 AraC-like ligand binding domain 34 106 4.0E-5 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 Vc3S01_A1132 6e4fe05db4b3c86acdf881b66f92b35f 285 Pfam PF12833 Helix-turn-helix domain 197 275 1.2E-18 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_A1132 6e4fe05db4b3c86acdf881b66f92b35f 285 Gene3D G3DSA:2.60.120.280 31 123 3.6E-9 T 12-10-2018 Vc3S01_A1132 6e4fe05db4b3c86acdf881b66f92b35f 285 SUPERFAMILY SSF46689 227 277 1.52E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_A1132 6e4fe05db4b3c86acdf881b66f92b35f 285 SUPERFAMILY SSF46689 176 225 4.21E-5 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_A1132 6e4fe05db4b3c86acdf881b66f92b35f 285 SMART SM00342 191 274 2.7E-27 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_A1873 5deb49cb25b823a37803732cd727156e 328 SUPERFAMILY SSF55347 125 288 4.97E-36 T 12-10-2018 Vc3S01_A1873 5deb49cb25b823a37803732cd727156e 328 Gene3D G3DSA:3.30.360.10 139 267 1.8E-95 T 12-10-2018 Vc3S01_A1873 5deb49cb25b823a37803732cd727156e 328 SUPERFAMILY SSF51735 2 146 1.08E-36 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_A1873 5deb49cb25b823a37803732cd727156e 328 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 132 236 1.2E-13 T 12-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 Vc3S01_A1873 5deb49cb25b823a37803732cd727156e 328 TIGRFAM TIGR04380 myo_inos_iolG: inositol 2-dehydrogenase 1 327 3.5E-126 T 12-10-2018 IPR030827 Inositol 2-dehydrogenase Vc3S01_A1873 5deb49cb25b823a37803732cd727156e 328 Gene3D G3DSA:3.40.50.720 4 317 1.8E-95 T 12-10-2018 Vc3S01_A1873 5deb49cb25b823a37803732cd727156e 328 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 113 1.9E-18 T 12-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Vc3S01_3158 ecbfeaff2ee4d7206bb4bec07a4d4a75 83 Pfam PF04380 Membrane fusogenic activity 1 78 3.0E-27 T 12-10-2018 IPR007475 Membrane fusogenic activity Vc3S01_0269 b298a12c0e1c62bdc0ef7b6a088defa1 237 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 56 93 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Vc3S01_0269 b298a12c0e1c62bdc0ef7b6a088defa1 237 SUPERFAMILY SSF53383 3 233 2.42E-76 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Vc3S01_0269 b298a12c0e1c62bdc0ef7b6a088defa1 237 Gene3D G3DSA:3.40.640.10 1 136 3.6E-55 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Vc3S01_0269 b298a12c0e1c62bdc0ef7b6a088defa1 237 Pfam PF00202 Aminotransferase class-III 8 233 2.3E-75 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Vc3S01_0782 c27a4a8e513b92e502013db2b27f9fe7 243 PIRSF PIRSF005650 4 243 6.3E-90 T 12-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 Vc3S01_0782 c27a4a8e513b92e502013db2b27f9fe7 243 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 240 1.2E-102 T 12-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 Vc3S01_0782 c27a4a8e513b92e502013db2b27f9fe7 243 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 44.187 T 12-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 Vc3S01_0782 c27a4a8e513b92e502013db2b27f9fe7 243 Gene3D G3DSA:3.40.1160.10 3 243 1.2E-76 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Vc3S01_0782 c27a4a8e513b92e502013db2b27f9fe7 243 Pfam PF00696 Amino acid kinase family 11 219 3.1E-27 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Vc3S01_0782 c27a4a8e513b92e502013db2b27f9fe7 243 SUPERFAMILY SSF53633 7 239 4.45E-72 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Vc3S01_1616 384c21ccf9d69348a7d9f754592dae64 365 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 155 251 4.6E-22 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Vc3S01_1616 384c21ccf9d69348a7d9f754592dae64 365 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 173 357 6.6E-23 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Vc3S01_1616 384c21ccf9d69348a7d9f754592dae64 365 SUPERFAMILY SSF161098 155 346 1.28E-40 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_1616 384c21ccf9d69348a7d9f754592dae64 365 Gene3D G3DSA:1.10.3720.10 147 363 9.8E-49 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_0777 b19be13dcbf7215f0edd0ab2989e8a64 127 Pfam PF11944 Protein of unknown function (DUF3461) 1 126 9.3E-57 T 12-10-2018 IPR020911 Uncharacterised protein family UPF0325 Vc3S01_0777 b19be13dcbf7215f0edd0ab2989e8a64 127 Hamap MF_01519 UPF0325 protein YaeH [yaeH]. 1 127 31.471 T 12-10-2018 IPR020911 Uncharacterised protein family UPF0325 Vc3S01_0777 b19be13dcbf7215f0edd0ab2989e8a64 127 ProDom PD080106 UPF0325 YAEH STRUCTURAL ECA1027 VV11856 YPTB3007 PBPRA2971 VV2560 VF1965 VC2264 1 126 2.0E-65 T 12-10-2018 IPR020911 Uncharacterised protein family UPF0325 Vc3S01_3139 eac55759a48977aaa2e149152fe79c7b 125 SUPERFAMILY SSF103481 6 108 1.24E-15 T 12-10-2018 Vc3S01_3139 eac55759a48977aaa2e149152fe79c7b 125 Pfam PF00893 Small Multidrug Resistance protein 6 94 4.9E-21 T 12-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 Vc3S01_3139 eac55759a48977aaa2e149152fe79c7b 125 Gene3D G3DSA:1.10.3730.20 4 109 1.1E-28 T 12-10-2018 Vc3S01_3066 6f78cae3420d4d47a3629e78e2130f53 702 Pfam PF05170 AsmA family 1 569 1.3E-133 T 12-10-2018 IPR007844 AsmA Vc3S01_2875 f1ab1c0fb40571a7a2fd561d8f8dc09a 323 SUPERFAMILY SSF48576 4 322 6.66E-99 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily Vc3S01_2875 f1ab1c0fb40571a7a2fd561d8f8dc09a 323 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 12-10-2018 IPR033749 Polyprenyl synthetase, conserved site Vc3S01_2875 f1ab1c0fb40571a7a2fd561d8f8dc09a 323 Gene3D G3DSA:1.10.600.10 1 323 3.1E-119 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily Vc3S01_2875 f1ab1c0fb40571a7a2fd561d8f8dc09a 323 Pfam PF00348 Polyprenyl synthetase 32 271 9.4E-74 T 12-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 Vc3S01_2875 f1ab1c0fb40571a7a2fd561d8f8dc09a 323 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 12-10-2018 IPR033749 Polyprenyl synthetase, conserved site Vc3S01_0673 f65796ef4702df941fd29c2bae4ccdb0 486 PRINTS PR00811 Bacterial general secretion pathway protein D signature 405 419 7.0E-10 T 12-10-2018 IPR001775 GspD/PilQ family Vc3S01_0673 f65796ef4702df941fd29c2bae4ccdb0 486 PRINTS PR00811 Bacterial general secretion pathway protein D signature 382 400 7.0E-10 T 12-10-2018 IPR001775 GspD/PilQ family Vc3S01_0673 f65796ef4702df941fd29c2bae4ccdb0 486 PRINTS PR00811 Bacterial general secretion pathway protein D signature 176 186 7.0E-10 T 12-10-2018 IPR001775 GspD/PilQ family Vc3S01_0673 f65796ef4702df941fd29c2bae4ccdb0 486 PRINTS PR00811 Bacterial general secretion pathway protein D signature 248 272 7.0E-10 T 12-10-2018 IPR001775 GspD/PilQ family Vc3S01_0673 f65796ef4702df941fd29c2bae4ccdb0 486 Pfam PF13629 Pilus formation protein N terminal region 27 96 1.5E-18 T 12-10-2018 IPR032789 Pilus formation protein, N-terminal Vc3S01_0673 f65796ef4702df941fd29c2bae4ccdb0 486 Pfam PF00263 Bacterial type II and III secretion system protein 254 416 8.4E-38 T 12-10-2018 IPR004846 Type II/III secretion system GO:0009306 Vc3S01_0673 f65796ef4702df941fd29c2bae4ccdb0 486 Pfam PF04972 BON domain 100 147 1.0E-6 T 12-10-2018 IPR007055 BON domain Vc3S01_A1224 0c8d7a23477bfbdb2b90e6d0962fb380 497 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 64 493 7.2E-185 T 12-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath Vc3S01_A1224 0c8d7a23477bfbdb2b90e6d0962fb380 497 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 19 493 3.5E-202 T 12-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath Vc3S01_p40109 292eb729f6bf0a075ea1a7632b7d4509 124 Pfam PF05101 Type IV secretory pathway, VirB3-like protein 13 79 2.0E-5 T 12-10-2018 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB Vc3S01_A0721 ced57fd4f883ac98b0da913e2afd29f6 151 SMART SM00344 1 110 1.1E-45 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 Vc3S01_A0721 ced57fd4f883ac98b0da913e2afd29f6 151 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 12-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site Vc3S01_A0721 ced57fd4f883ac98b0da913e2afd29f6 151 Gene3D G3DSA:1.10.10.10 2 51 2.2E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A0721 ced57fd4f883ac98b0da913e2afd29f6 151 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 47 3.8E-18 T 12-10-2018 Vc3S01_A0721 ced57fd4f883ac98b0da913e2afd29f6 151 SUPERFAMILY SSF46785 1 60 1.3E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A0721 ced57fd4f883ac98b0da913e2afd29f6 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 1.8E-15 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Vc3S01_A0721 ced57fd4f883ac98b0da913e2afd29f6 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 1.8E-15 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Vc3S01_A0721 ced57fd4f883ac98b0da913e2afd29f6 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 1.8E-15 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Vc3S01_A0721 ced57fd4f883ac98b0da913e2afd29f6 151 SUPERFAMILY SSF54909 63 148 1.74E-21 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel Vc3S01_A0721 ced57fd4f883ac98b0da913e2afd29f6 151 Pfam PF01037 Lrp/AsnC ligand binding domain 67 140 1.2E-21 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Vc3S01_A0721 ced57fd4f883ac98b0da913e2afd29f6 151 Gene3D G3DSA:3.30.70.920 52 146 5.9E-24 T 12-10-2018 Vc3S01_2960 1b67b7946504bc6a4954c17132bd45a6 388 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 378 2.7E-104 T 12-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 Vc3S01_2960 1b67b7946504bc6a4954c17132bd45a6 388 Gene3D G3DSA:3.40.50.720 1 193 1.3E-59 T 12-10-2018 Vc3S01_2960 1b67b7946504bc6a4954c17132bd45a6 388 PIRSF PIRSF500134 1 343 7.0E-122 T 12-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 Vc3S01_2960 1b67b7946504bc6a4954c17132bd45a6 388 PIRSF PIRSF500134 338 388 0.016 T 12-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 Vc3S01_2960 1b67b7946504bc6a4954c17132bd45a6 388 SUPERFAMILY SSF51735 1 194 1.34E-48 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_2960 1b67b7946504bc6a4954c17132bd45a6 388 Gene3D G3DSA:3.40.50.720 222 388 2.2E-67 T 12-10-2018 Vc3S01_2960 1b67b7946504bc6a4954c17132bd45a6 388 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 168 1.0E-33 T 12-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Vc3S01_2960 1b67b7946504bc6a4954c17132bd45a6 388 PIRSF PIRSF000124 1 388 1.2E-136 T 12-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 Vc3S01_2960 1b67b7946504bc6a4954c17132bd45a6 388 SMART SM00984 300 387 2.7E-12 T 12-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Vc3S01_2960 1b67b7946504bc6a4954c17132bd45a6 388 Gene3D G3DSA:1.20.5.100 194 220 6.9E-20 T 12-10-2018 Vc3S01_2960 1b67b7946504bc6a4954c17132bd45a6 388 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 301 375 3.5E-8 T 12-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Vc3S01_2960 1b67b7946504bc6a4954c17132bd45a6 388 SUPERFAMILY SSF52413 283 387 2.35E-27 T 12-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 Vc3S01_2960 1b67b7946504bc6a4954c17132bd45a6 388 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 192 281 5.5E-27 T 12-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Vc3S01_2960 1b67b7946504bc6a4954c17132bd45a6 388 SUPERFAMILY SSF48179 191 287 3.74E-30 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Vc3S01_1594 dfc3b3f04bc69ad59fc91b4c261d50f8 160 SUPERFAMILY SSF55729 4 146 4.19E-29 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_1594 dfc3b3f04bc69ad59fc91b4c261d50f8 160 Gene3D G3DSA:3.40.630.30 3 137 2.2E-34 T 12-10-2018 Vc3S01_1594 dfc3b3f04bc69ad59fc91b4c261d50f8 160 Pfam PF00583 Acetyltransferase (GNAT) family 29 146 1.5E-18 T 12-10-2018 IPR000182 GNAT domain Vc3S01_2887 3de45fc474b2de37f2d5a6d1f99d78a9 338 SUPERFAMILY SSF56655 3 331 1.83E-114 T 12-10-2018 Vc3S01_2887 3de45fc474b2de37f2d5a6d1f99d78a9 338 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 5 333 43.161 T 12-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Vc3S01_2887 3de45fc474b2de37f2d5a6d1f99d78a9 338 Gene3D G3DSA:3.30.540.10 4 198 1.1E-76 T 12-10-2018 Vc3S01_2887 3de45fc474b2de37f2d5a6d1f99d78a9 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 151 174 2.5E-75 T 12-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Vc3S01_2887 3de45fc474b2de37f2d5a6d1f99d78a9 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 182 205 2.5E-75 T 12-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Vc3S01_2887 3de45fc474b2de37f2d5a6d1f99d78a9 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 307 332 2.5E-75 T 12-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Vc3S01_2887 3de45fc474b2de37f2d5a6d1f99d78a9 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 208 235 2.5E-75 T 12-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Vc3S01_2887 3de45fc474b2de37f2d5a6d1f99d78a9 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 30 57 2.5E-75 T 12-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Vc3S01_2887 3de45fc474b2de37f2d5a6d1f99d78a9 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 67 93 2.5E-75 T 12-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Vc3S01_2887 3de45fc474b2de37f2d5a6d1f99d78a9 338 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 6 197 1.9E-75 T 12-10-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Vc3S01_2887 3de45fc474b2de37f2d5a6d1f99d78a9 338 PIRSF PIRSF500210 1 336 3.9E-129 T 12-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Vc3S01_2887 3de45fc474b2de37f2d5a6d1f99d78a9 338 PIRSF PIRSF000904 2 337 3.6E-126 T 12-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Vc3S01_2887 3de45fc474b2de37f2d5a6d1f99d78a9 338 Gene3D G3DSA:3.40.190.80 200 336 1.9E-60 T 12-10-2018 Vc3S01_2887 3de45fc474b2de37f2d5a6d1f99d78a9 338 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 273 285 - T 12-10-2018 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Vc3S01_A0572 1ffe81541308272621dd898c592c555f 449 SMART SM00642 13 374 1.4E-27 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Vc3S01_A0572 1ffe81541308272621dd898c592c555f 449 PRINTS PR00110 Alpha-amylase signature 55 72 7.3E-16 T 12-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 Vc3S01_A0572 1ffe81541308272621dd898c592c555f 449 PRINTS PR00110 Alpha-amylase signature 201 212 7.3E-16 T 12-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 Vc3S01_A0572 1ffe81541308272621dd898c592c555f 449 PRINTS PR00110 Alpha-amylase signature 296 308 7.3E-16 T 12-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 Vc3S01_A0572 1ffe81541308272621dd898c592c555f 449 PRINTS PR00110 Alpha-amylase signature 230 248 7.3E-16 T 12-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 Vc3S01_A0572 1ffe81541308272621dd898c592c555f 449 PRINTS PR00110 Alpha-amylase signature 88 99 7.3E-16 T 12-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 Vc3S01_A0572 1ffe81541308272621dd898c592c555f 449 SUPERFAMILY SSF51445 12 344 2.16E-61 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily Vc3S01_A0572 1ffe81541308272621dd898c592c555f 449 Gene3D G3DSA:3.20.20.80 9 379 2.2E-78 T 12-10-2018 Vc3S01_A0572 1ffe81541308272621dd898c592c555f 449 Pfam PF00128 Alpha amylase, catalytic domain 33 238 8.2E-18 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Vc3S01_A0271 7c1008342a7605be7432905339e0590e 132 Pfam PF02566 OsmC-like protein 29 127 6.7E-17 T 12-10-2018 IPR003718 OsmC/Ohr family Vc3S01_A0271 7c1008342a7605be7432905339e0590e 132 SUPERFAMILY SSF82784 1 131 2.09E-38 T 12-10-2018 IPR036102 OsmC/Ohr superfamily Vc3S01_A0271 7c1008342a7605be7432905339e0590e 132 Gene3D G3DSA:2.20.25.10 1 34 2.3E-20 T 12-10-2018 Vc3S01_A0271 7c1008342a7605be7432905339e0590e 132 Gene3D G3DSA:3.30.300.20 35 132 9.6E-24 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta Vc3S01_A0319 f0ec9eab955253a311741ed426f07f7f 228 Pfam PF03963 Flagellar hook capping protein - N-terminal region 25 85 3.1E-18 T 12-10-2018 IPR005648 Flagellar hook capping protein Vc3S01_A0319 f0ec9eab955253a311741ed426f07f7f 228 Pfam PF13860 FlgD Ig-like domain 113 183 6.8E-9 T 12-10-2018 IPR025965 FlgD Ig-like domain Vc3S01_A0319 f0ec9eab955253a311741ed426f07f7f 228 Pfam PF13861 FlgD Tudor-like domain 95 224 1.3E-11 T 12-10-2018 IPR025963 FlgD Tudor-like domain Vc3S01_A0319 f0ec9eab955253a311741ed426f07f7f 228 Gene3D G3DSA:2.60.40.4070 112 191 1.3E-16 T 12-10-2018 Vc3S01_A0319 f0ec9eab955253a311741ed426f07f7f 228 Gene3D G3DSA:2.30.30.910 101 223 1.3E-16 T 12-10-2018 Vc3S01_A0211 36dbbe55b42ae0a1abf9984d20593a47 252 Pfam PF11932 Protein of unknown function (DUF3450) 6 245 2.1E-86 T 12-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 Vc3S01_A0211 36dbbe55b42ae0a1abf9984d20593a47 252 PIRSF PIRSF028069 1 252 1.0E-108 T 12-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 Vc3S01_2560 1fffda911647da8b23a6a761614d2887 295 Gene3D G3DSA:1.10.600.10 1 295 8.9E-115 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily Vc3S01_2560 1fffda911647da8b23a6a761614d2887 295 Pfam PF00348 Polyprenyl synthetase 30 271 6.8E-59 T 12-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 Vc3S01_2560 1fffda911647da8b23a6a761614d2887 295 SUPERFAMILY SSF48576 4 286 8.02E-86 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily Vc3S01_2560 1fffda911647da8b23a6a761614d2887 295 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 214 226 - T 12-10-2018 IPR033749 Polyprenyl synthetase, conserved site Vc3S01_2560 1fffda911647da8b23a6a761614d2887 295 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 80 96 - T 12-10-2018 IPR033749 Polyprenyl synthetase, conserved site Vc3S01_3178 7b1de6cce2b469c97a0711dcfc41b181 481 PIRSF PIRSF006247 1 481 4.6E-167 T 12-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 Vc3S01_3178 7b1de6cce2b469c97a0711dcfc41b181 481 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 85 464 3.2E-116 T 12-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 Vc3S01_3178 7b1de6cce2b469c97a0711dcfc41b181 481 Pfam PF02386 Cation transport protein 51 475 2.8E-49 T 12-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 Vc3S01_A1785 1dfc889a31cd79c4b86084ca67aa6639 243 Gene3D G3DSA:1.10.150.690 29 119 1.1E-13 T 12-10-2018 Vc3S01_A1785 1dfc889a31cd79c4b86084ca67aa6639 243 Pfam PF09836 Putative DNA-binding domain 26 88 3.1E-9 T 12-10-2018 IPR018640 Putative DNA-binding domain, bacteria Vc3S01_1404 39148bc48f6af3999bcb8dec450bb930 159 Gene3D G3DSA:3.40.630.30 1 159 1.4E-43 T 12-10-2018 Vc3S01_1404 39148bc48f6af3999bcb8dec450bb930 159 SUPERFAMILY SSF55729 1 154 7.55E-38 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_1404 39148bc48f6af3999bcb8dec450bb930 159 Pfam PF13673 Acetyltransferase (GNAT) domain 28 150 2.5E-20 T 12-10-2018 IPR000182 GNAT domain Vc3S01_0480 e4b6991682953a62726a38de33ec0898 243 Gene3D G3DSA:3.40.1280.10 74 243 4.8E-66 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Vc3S01_0480 e4b6991682953a62726a38de33ec0898 243 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 2 242 7.8E-87 T 12-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 Vc3S01_0480 e4b6991682953a62726a38de33ec0898 243 SUPERFAMILY SSF88697 2 70 1.62E-17 T 12-10-2018 IPR015947 PUA-like superfamily Vc3S01_0480 e4b6991682953a62726a38de33ec0898 243 SUPERFAMILY SSF75217 75 242 3.27E-53 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases Vc3S01_0480 e4b6991682953a62726a38de33ec0898 243 Gene3D G3DSA:2.40.240.20 1 71 1.5E-22 T 12-10-2018 Vc3S01_0480 e4b6991682953a62726a38de33ec0898 243 PIRSF PIRSF015601 2 242 7.0E-57 T 12-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 Vc3S01_0480 e4b6991682953a62726a38de33ec0898 243 Pfam PF04452 RNA methyltransferase 19 236 1.0E-75 T 12-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 Vc3S01_2624 4ef586bf1ffdc6c7ff1d490e513f7686 334 Pfam PF00990 Diguanylate cyclase, GGDEF domain 180 333 5.0E-34 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_2624 4ef586bf1ffdc6c7ff1d490e513f7686 334 SMART SM00267 169 333 1.4E-29 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_2624 4ef586bf1ffdc6c7ff1d490e513f7686 334 SUPERFAMILY SSF55073 185 333 6.04E-34 T 12-10-2018 IPR029787 Nucleotide cyclase Vc3S01_2624 4ef586bf1ffdc6c7ff1d490e513f7686 334 Gene3D G3DSA:3.30.450.40 27 176 2.6E-25 T 12-10-2018 IPR029016 GAF-like domain superfamily Vc3S01_2624 4ef586bf1ffdc6c7ff1d490e513f7686 334 Gene3D G3DSA:3.30.70.270 177 334 1.5E-41 T 12-10-2018 Vc3S01_2624 4ef586bf1ffdc6c7ff1d490e513f7686 334 SMART SM00065 25 177 2.2E-16 T 12-10-2018 IPR003018 GAF domain GO:0005515 Vc3S01_2624 4ef586bf1ffdc6c7ff1d490e513f7686 334 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 177 333 8.3E-38 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_2624 4ef586bf1ffdc6c7ff1d490e513f7686 334 SUPERFAMILY SSF55781 9 168 1.46E-25 T 12-10-2018 Vc3S01_2624 4ef586bf1ffdc6c7ff1d490e513f7686 334 Pfam PF13185 GAF domain 26 168 5.6E-15 T 12-10-2018 IPR003018 GAF domain GO:0005515 Vc3S01_1541 2d1346c587b160b9543cbfddc344d46f 395 Pfam PF12698 ABC-2 family transporter protein 15 367 5.9E-38 T 12-10-2018 Vc3S01_A0897 3c1012d849b133402d9b125ce03303a4 780 Gene3D G3DSA:3.10.450.40 112 195 2.9E-18 T 12-10-2018 Vc3S01_A0897 3c1012d849b133402d9b125ce03303a4 780 Gene3D G3DSA:2.60.40.10 607 693 2.6E-27 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_A0897 3c1012d849b133402d9b125ce03303a4 780 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 207 345 7.2E-38 T 12-10-2018 IPR013856 Peptidase M4 domain GO:0004222 Vc3S01_A0897 3c1012d849b133402d9b125ce03303a4 780 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 348 492 1.0E-36 T 12-10-2018 IPR001570 Peptidase M4, C-terminal GO:0004222 Vc3S01_A0897 3c1012d849b133402d9b125ce03303a4 780 Pfam PF00801 PKD domain 622 682 4.9E-16 T 12-10-2018 IPR000601 PKD domain Vc3S01_A0897 3c1012d849b133402d9b125ce03303a4 780 Gene3D G3DSA:1.10.390.10 350 496 1.4E-50 T 12-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily Vc3S01_A0897 3c1012d849b133402d9b125ce03303a4 780 SMART SM00089 609 693 1.8E-19 T 12-10-2018 IPR022409 PKD/Chitinase domain Vc3S01_A0897 3c1012d849b133402d9b125ce03303a4 780 Gene3D G3DSA:3.10.170.10 198 349 1.1E-64 T 12-10-2018 Vc3S01_A0897 3c1012d849b133402d9b125ce03303a4 780 SUPERFAMILY SSF55486 200 492 1.32E-85 T 12-10-2018 Vc3S01_A0897 3c1012d849b133402d9b125ce03303a4 780 SUPERFAMILY SSF49299 611 691 1.31E-21 T 12-10-2018 IPR035986 PKD domain superfamily Vc3S01_A0897 3c1012d849b133402d9b125ce03303a4 780 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 357 368 2.5E-26 T 12-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 Vc3S01_A0897 3c1012d849b133402d9b125ce03303a4 780 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 302 322 2.5E-26 T 12-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 Vc3S01_A0897 3c1012d849b133402d9b125ce03303a4 780 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 336 352 2.5E-26 T 12-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 Vc3S01_A0897 3c1012d849b133402d9b125ce03303a4 780 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 419 435 2.5E-26 T 12-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 Vc3S01_A0897 3c1012d849b133402d9b125ce03303a4 780 Gene3D G3DSA:2.60.120.380 507 605 3.6E-20 T 12-10-2018 Vc3S01_A1614 af50a2f257cf1d266e0782e4c876b5fc 175 Gene3D G3DSA:3.40.630.30 2 156 5.3E-20 T 12-10-2018 Vc3S01_A1614 af50a2f257cf1d266e0782e4c876b5fc 175 SUPERFAMILY SSF55729 2 149 1.69E-21 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_A1614 af50a2f257cf1d266e0782e4c876b5fc 175 Pfam PF00583 Acetyltransferase (GNAT) family 45 137 2.9E-10 T 12-10-2018 IPR000182 GNAT domain Vc3S01_1392 0124f24a134b89f324f7df908c78118b 55 Pfam PF11665 Protein of unknown function (DUF3265) 28 55 5.7E-11 T 12-10-2018 IPR021681 Protein of unknown function DUF3265 Vc3S01_3062 5b24dc0ab6892e8dc1af35ae50d4aeb0 307 TIGRFAM TIGR01713 typeII_sec_gspC: type II secretion system protein C 34 307 2.0E-73 T 12-10-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 Vc3S01_3062 5b24dc0ab6892e8dc1af35ae50d4aeb0 307 Gene3D G3DSA:2.30.42.10 203 307 2.5E-26 T 12-10-2018 Vc3S01_3062 5b24dc0ab6892e8dc1af35ae50d4aeb0 307 Gene3D G3DSA:2.30.30.830 111 178 7.3E-29 T 12-10-2018 Vc3S01_3062 5b24dc0ab6892e8dc1af35ae50d4aeb0 307 SUPERFAMILY SSF50156 211 307 1.97E-18 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 Vc3S01_3062 5b24dc0ab6892e8dc1af35ae50d4aeb0 307 ProSitePatterns PS01141 Bacterial type II secretion system protein C signature. 245 271 - T 12-10-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 Vc3S01_3062 5b24dc0ab6892e8dc1af35ae50d4aeb0 307 Pfam PF11356 Type II secretion system protein C 37 177 7.6E-45 T 12-10-2018 IPR024961 Type II secretion system protein C, N-terminal Vc3S01_1497 8e9ac4d9467463ff12c2ad3bb7a4095d 249 Gene3D G3DSA:3.30.420.10 54 238 1.6E-35 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Vc3S01_1497 8e9ac4d9467463ff12c2ad3bb7a4095d 249 SUPERFAMILY SSF53098 51 238 1.18E-40 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Vc3S01_1497 8e9ac4d9467463ff12c2ad3bb7a4095d 249 Pfam PF00929 Exonuclease 60 230 2.6E-16 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Vc3S01_1497 8e9ac4d9467463ff12c2ad3bb7a4095d 249 SMART SM00479 58 239 5.0E-25 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Vc3S01_2394 69fedecf31a8700497ff57836dc02f36 290 SUPERFAMILY SSF51735 1 122 1.46E-42 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_2394 69fedecf31a8700497ff57836dc02f36 290 PIRSF PIRSF001553 1 289 3.4E-134 T 12-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Vc3S01_2394 69fedecf31a8700497ff57836dc02f36 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 12-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site Vc3S01_2394 69fedecf31a8700497ff57836dc02f36 290 Pfam PF00549 CoA-ligase 151 271 3.4E-22 T 12-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Vc3S01_2394 69fedecf31a8700497ff57836dc02f36 290 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 2.0E-40 T 12-10-2018 Vc3S01_2394 69fedecf31a8700497ff57836dc02f36 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 2.0E-40 T 12-10-2018 Vc3S01_2394 69fedecf31a8700497ff57836dc02f36 290 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 2.0E-40 T 12-10-2018 Vc3S01_2394 69fedecf31a8700497ff57836dc02f36 290 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 2.0E-40 T 12-10-2018 Vc3S01_2394 69fedecf31a8700497ff57836dc02f36 290 Gene3D G3DSA:3.40.50.720 1 123 4.3E-51 T 12-10-2018 Vc3S01_2394 69fedecf31a8700497ff57836dc02f36 290 Pfam PF02629 CoA binding domain 6 99 6.0E-31 T 12-10-2018 IPR003781 CoA-binding GO:0048037 Vc3S01_2394 69fedecf31a8700497ff57836dc02f36 290 SUPERFAMILY SSF52210 123 285 1.19E-55 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Vc3S01_2394 69fedecf31a8700497ff57836dc02f36 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 12-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site Vc3S01_2394 69fedecf31a8700497ff57836dc02f36 290 Gene3D G3DSA:3.40.50.261 124 288 6.4E-76 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Vc3S01_2394 69fedecf31a8700497ff57836dc02f36 290 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 43.428 T 12-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Vc3S01_2394 69fedecf31a8700497ff57836dc02f36 290 SMART SM00881 4 100 1.1E-35 T 12-10-2018 IPR003781 CoA-binding GO:0048037 Vc3S01_2394 69fedecf31a8700497ff57836dc02f36 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 287 6.5E-146 T 12-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Vc3S01_0837 44c77be505de799541e9944abf8ce546 300 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 5 293 3.6E-83 T 12-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 Vc3S01_0837 44c77be505de799541e9944abf8ce546 300 SUPERFAMILY SSF54909 1 297 4.83E-93 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel Vc3S01_0837 44c77be505de799541e9944abf8ce546 300 Pfam PF04261 Dyp-type peroxidase family 5 293 2.9E-89 T 12-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 Vc3S01_A0559 af5041575b5ac1d2feb26f0735aa9dd3 345 Pfam PF01032 FecCD transport family 19 338 7.5E-92 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Vc3S01_A0559 af5041575b5ac1d2feb26f0735aa9dd3 345 SUPERFAMILY SSF81345 5 339 6.93E-84 T 12-10-2018 IPR037294 ABC transporter, BtuC-like Vc3S01_A0559 af5041575b5ac1d2feb26f0735aa9dd3 345 Gene3D G3DSA:1.10.3470.10 5 344 5.4E-106 T 12-10-2018 IPR037294 ABC transporter, BtuC-like Vc3S01_A0114 07fb8a1c95860df34753ebab94ad8099 292 SUPERFAMILY SSF46689 239 288 6.72E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_A0114 07fb8a1c95860df34753ebab94ad8099 292 Pfam PF07883 Cupin domain 28 75 2.3E-8 T 12-10-2018 IPR013096 Cupin 2, conserved barrel Vc3S01_A0114 07fb8a1c95860df34753ebab94ad8099 292 SMART SM00342 201 285 5.1E-27 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_A0114 07fb8a1c95860df34753ebab94ad8099 292 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 254 269 3.0E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Vc3S01_A0114 07fb8a1c95860df34753ebab94ad8099 292 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 269 285 3.0E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Vc3S01_A0114 07fb8a1c95860df34753ebab94ad8099 292 Pfam PF12833 Helix-turn-helix domain 207 286 1.3E-23 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_A0114 07fb8a1c95860df34753ebab94ad8099 292 Gene3D G3DSA:2.60.120.10 4 91 5.5E-12 T 12-10-2018 IPR014710 RmlC-like jelly roll fold Vc3S01_A0114 07fb8a1c95860df34753ebab94ad8099 292 Gene3D G3DSA:1.10.10.60 174 291 1.2E-28 T 12-10-2018 Vc3S01_A0114 07fb8a1c95860df34753ebab94ad8099 292 SUPERFAMILY SSF51215 24 171 9.94E-15 T 12-10-2018 IPR037923 Transcription regulator HTH-like Vc3S01_2670 13830307f6bedd04b731f946b9668216 382 Gene3D G3DSA:1.10.287.130 152 222 2.3E-20 T 12-10-2018 Vc3S01_2670 13830307f6bedd04b731f946b9668216 382 SMART SM00387 267 379 1.8E-32 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_2670 13830307f6bedd04b731f946b9668216 382 Gene3D G3DSA:3.30.450.20 35 151 2.9E-10 T 12-10-2018 Vc3S01_2670 13830307f6bedd04b731f946b9668216 382 SMART SM00091 48 116 5.1E-6 T 12-10-2018 IPR000014 PAS domain Vc3S01_2670 13830307f6bedd04b731f946b9668216 382 Pfam PF00989 PAS fold 49 118 6.2E-8 T 12-10-2018 IPR013767 PAS fold GO:0006355 Vc3S01_2670 13830307f6bedd04b731f946b9668216 382 Pfam PF00512 His Kinase A (phospho-acceptor) domain 155 221 3.5E-16 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_2670 13830307f6bedd04b731f946b9668216 382 Gene3D G3DSA:3.30.565.10 230 379 5.7E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_2670 13830307f6bedd04b731f946b9668216 382 SUPERFAMILY SSF47384 142 221 1.26E-18 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Vc3S01_2670 13830307f6bedd04b731f946b9668216 382 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 49 154 4.8E-6 T 12-10-2018 IPR000014 PAS domain Vc3S01_2670 13830307f6bedd04b731f946b9668216 382 SMART SM00388 155 222 1.7E-19 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_2670 13830307f6bedd04b731f946b9668216 382 PRINTS PR00344 Bacterial sensor protein C-terminal signature 322 332 1.6E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_2670 13830307f6bedd04b731f946b9668216 382 PRINTS PR00344 Bacterial sensor protein C-terminal signature 339 357 1.6E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_2670 13830307f6bedd04b731f946b9668216 382 PRINTS PR00344 Bacterial sensor protein C-terminal signature 304 318 1.6E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_2670 13830307f6bedd04b731f946b9668216 382 PRINTS PR00344 Bacterial sensor protein C-terminal signature 363 376 1.6E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_2670 13830307f6bedd04b731f946b9668216 382 SUPERFAMILY SSF55874 211 377 1.26E-40 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_2670 13830307f6bedd04b731f946b9668216 382 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 44 375 1.9E-138 T 12-10-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 Vc3S01_2670 13830307f6bedd04b731f946b9668216 382 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 267 377 5.2E-23 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_2670 13830307f6bedd04b731f946b9668216 382 SUPERFAMILY SSF55785 36 146 1.61E-11 T 12-10-2018 IPR035965 PAS domain superfamily Vc3S01_2670 13830307f6bedd04b731f946b9668216 382 Pfam PF11808 Domain of unknown function (DUF3329) 2 41 1.2E-13 T 12-10-2018 IPR021766 Phosphate regulon sensor protein PhoR GO:0000155|GO:0000160|GO:0004721 Vc3S01_1857 69c2b27fd289263cd3c76bb34a35d5a6 98 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 95 7.4E-51 T 12-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 Vc3S01_1857 69c2b27fd289263cd3c76bb34a35d5a6 98 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 12-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 Vc3S01_1857 69c2b27fd289263cd3c76bb34a35d5a6 98 Pfam PF00216 Bacterial DNA-binding protein 3 91 2.0E-31 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Vc3S01_1857 69c2b27fd289263cd3c76bb34a35d5a6 98 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 5.9E-17 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Vc3S01_1857 69c2b27fd289263cd3c76bb34a35d5a6 98 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 5.9E-17 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Vc3S01_1857 69c2b27fd289263cd3c76bb34a35d5a6 98 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 5.9E-17 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Vc3S01_1857 69c2b27fd289263cd3c76bb34a35d5a6 98 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 30.644 T 12-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 Vc3S01_1857 69c2b27fd289263cd3c76bb34a35d5a6 98 SMART SM00411 3 92 1.6E-40 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Vc3S01_1857 69c2b27fd289263cd3c76bb34a35d5a6 98 SUPERFAMILY SSF47729 3 95 3.68E-32 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Vc3S01_1857 69c2b27fd289263cd3c76bb34a35d5a6 98 Gene3D G3DSA:4.10.520.10 1 98 4.8E-38 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Vc3S01_A2008 671078484dd462fa09ff84baba298618 470 Hamap MF_00675 Uronate isomerase [uxaC]. 2 468 50.208 T 12-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 Vc3S01_A2008 671078484dd462fa09ff84baba298618 470 Pfam PF02614 Glucuronate isomerase 1 466 5.0E-230 T 12-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 Vc3S01_A2008 671078484dd462fa09ff84baba298618 470 SUPERFAMILY SSF51556 2 466 4.08E-183 T 12-10-2018 IPR032466 Metal-dependent hydrolase Vc3S01_A2008 671078484dd462fa09ff84baba298618 470 Gene3D G3DSA:3.20.20.140 7 466 3.9E-202 T 12-10-2018 Vc3S01_A2008 671078484dd462fa09ff84baba298618 470 Gene3D G3DSA:1.10.2020.10 46 137 3.9E-202 T 12-10-2018 Vc3S01_A1033 e09b296873c4fbdff0124b433f628631 581 Pfam PF02378 Phosphotransferase system, EIIC 251 514 9.2E-18 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 Vc3S01_A1033 e09b296873c4fbdff0124b433f628631 581 SUPERFAMILY SSF52794 2 100 2.62E-28 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 Vc3S01_A1033 e09b296873c4fbdff0124b433f628631 581 Gene3D G3DSA:3.40.50.2300 114 226 5.0E-41 T 12-10-2018 Vc3S01_A1033 e09b296873c4fbdff0124b433f628631 581 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 235 570 2.9E-142 T 12-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 Vc3S01_A1033 e09b296873c4fbdff0124b433f628631 581 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 127 210 1.5E-36 T 12-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 Vc3S01_A1033 e09b296873c4fbdff0124b433f628631 581 SUPERFAMILY SSF52794 125 226 3.14E-37 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 Vc3S01_A1033 e09b296873c4fbdff0124b433f628631 581 Gene3D G3DSA:3.40.50.2300 1 103 5.9E-25 T 12-10-2018 Vc3S01_A1033 e09b296873c4fbdff0124b433f628631 581 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 93 7.6E-13 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 Vc3S01_A1033 e09b296873c4fbdff0124b433f628631 581 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 128 215 3.5E-17 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 Vc3S01_0518 f2e09b48b7ecd3b62802fa4076dba45d 126 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 2 126 8.0E-45 T 12-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 Vc3S01_0518 f2e09b48b7ecd3b62802fa4076dba45d 126 Gene3D G3DSA:3.90.470.20 1 126 5.3E-40 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Vc3S01_0518 f2e09b48b7ecd3b62802fa4076dba45d 126 SUPERFAMILY SSF56214 3 125 2.88E-30 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Vc3S01_0518 f2e09b48b7ecd3b62802fa4076dba45d 126 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 9 87 1.0E-35 T 12-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 Vc3S01_0518 f2e09b48b7ecd3b62802fa4076dba45d 126 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 3 125 9.0E-32 T 12-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 Vc3S01_0518 f2e09b48b7ecd3b62802fa4076dba45d 126 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 5 122 3.1E-21 T 12-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Vc3S01_0518 f2e09b48b7ecd3b62802fa4076dba45d 126 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 4 126 26.004 T 12-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 Vc3S01_2261 c2a5153ceaff5bd3869e52d0c99efefa 335 SUPERFAMILY SSF52540 50 160 4.43E-12 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2261 c2a5153ceaff5bd3869e52d0c99efefa 335 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 18 323 6.0E-112 T 12-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 Vc3S01_2261 c2a5153ceaff5bd3869e52d0c99efefa 335 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 23 325 3.2E-97 T 12-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 Vc3S01_2261 c2a5153ceaff5bd3869e52d0c99efefa 335 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 1 324 40.357 T 12-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 Vc3S01_2769 541161fd2d19ffc88313bf5c094ff96b 132 ProSitePatterns PS00893 Nudix box signature. 39 60 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Vc3S01_2769 541161fd2d19ffc88313bf5c094ff96b 132 PRINTS PR00502 NUDIX hydrolase family signature 34 48 4.2E-10 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Vc3S01_2769 541161fd2d19ffc88313bf5c094ff96b 132 PRINTS PR00502 NUDIX hydrolase family signature 48 63 4.2E-10 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Vc3S01_2769 541161fd2d19ffc88313bf5c094ff96b 132 SUPERFAMILY SSF55811 1 127 3.38E-35 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Vc3S01_2769 541161fd2d19ffc88313bf5c094ff96b 132 Gene3D G3DSA:3.90.79.10 1 132 9.5E-42 T 12-10-2018 Vc3S01_2769 541161fd2d19ffc88313bf5c094ff96b 132 Pfam PF00293 NUDIX domain 7 125 2.1E-21 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Vc3S01_2769 541161fd2d19ffc88313bf5c094ff96b 132 TIGRFAM TIGR00586 mutt: mutator mutT protein 1 127 3.1E-44 T 12-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 Vc3S01_A0753 2c1f386ba159f9dcf9407cf28a49c4d4 210 Pfam PF13462 Thioredoxin 49 198 1.6E-8 T 12-10-2018 IPR012336 Thioredoxin-like fold Vc3S01_A0753 2c1f386ba159f9dcf9407cf28a49c4d4 210 Gene3D G3DSA:3.40.30.10 24 208 1.2E-39 T 12-10-2018 Vc3S01_A0753 2c1f386ba159f9dcf9407cf28a49c4d4 210 SUPERFAMILY SSF52833 27 207 5.81E-25 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Vc3S01_A0753 2c1f386ba159f9dcf9407cf28a49c4d4 210 ProSitePatterns PS00194 Thioredoxin family active site. 49 67 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Vc3S01_0824 cd9845c4dc9f7b24b579fa340446a0a2 356 Pfam PF01594 AI-2E family transporter 20 345 2.3E-74 T 12-10-2018 IPR002549 Transmembrane protein TqsA-like Vc3S01_2566 0c65fb24ca094b07d8f1e1c7edeccec4 369 Pfam PF00925 GTP cyclohydrolase II 207 367 2.2E-40 T 12-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Vc3S01_2566 0c65fb24ca094b07d8f1e1c7edeccec4 369 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 7 198 8.9E-86 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Vc3S01_2566 0c65fb24ca094b07d8f1e1c7edeccec4 369 Gene3D G3DSA:3.40.50.10990 206 368 3.3E-32 T 12-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Vc3S01_2566 0c65fb24ca094b07d8f1e1c7edeccec4 369 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 38.593 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Vc3S01_2566 0c65fb24ca094b07d8f1e1c7edeccec4 369 SUPERFAMILY SSF55821 3 202 3.66E-87 T 12-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Vc3S01_2566 0c65fb24ca094b07d8f1e1c7edeccec4 369 PIRSF PIRSF001259 3 369 4.2E-131 T 12-10-2018 Vc3S01_2566 0c65fb24ca094b07d8f1e1c7edeccec4 369 SUPERFAMILY SSF142695 205 367 1.83E-48 T 12-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Vc3S01_2566 0c65fb24ca094b07d8f1e1c7edeccec4 369 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 7 198 2.9E-76 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Vc3S01_2566 0c65fb24ca094b07d8f1e1c7edeccec4 369 Gene3D G3DSA:3.90.870.10 1 205 1.3E-89 T 12-10-2018 Vc3S01_2786 933b5c48edec674cd222462acb887ae0 287 SUPERFAMILY SSF53790 12 232 4.97E-86 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Vc3S01_2786 933b5c48edec674cd222462acb887ae0 287 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 14 284 1.4E-103 T 12-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 Vc3S01_2786 933b5c48edec674cd222462acb887ae0 287 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 91 102 - T 12-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 Vc3S01_2786 933b5c48edec674cd222462acb887ae0 287 PIRSF PIRSF005917 1 286 1.8E-108 T 12-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 Vc3S01_2786 933b5c48edec674cd222462acb887ae0 287 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 13 213 1.2E-29 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Vc3S01_2786 933b5c48edec674cd222462acb887ae0 287 Gene3D G3DSA:3.30.950.10 121 241 6.8E-45 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Vc3S01_2786 933b5c48edec674cd222462acb887ae0 287 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 13 234 38.707 T 12-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 Vc3S01_2786 933b5c48edec674cd222462acb887ae0 287 Gene3D G3DSA:3.40.1010.10 2 120 5.7E-48 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Vc3S01_1280 17acd858330055569f55c7acda17397d 505 Pfam PF05683 Fumarase C-terminus 289 490 3.1E-83 T 12-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 Vc3S01_1280 17acd858330055569f55c7acda17397d 505 PIRSF PIRSF001394 1 505 2.4E-215 T 12-10-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 Vc3S01_1280 17acd858330055569f55c7acda17397d 505 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 12 284 2.2E-62 T 12-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 Vc3S01_1280 17acd858330055569f55c7acda17397d 505 Pfam PF05681 Fumarate hydratase (Fumerase) 11 285 1.2E-97 T 12-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 Vc3S01_1280 17acd858330055569f55c7acda17397d 505 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 325 488 3.2E-51 T 12-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 Vc3S01_1280 17acd858330055569f55c7acda17397d 505 Gene3D G3DSA:3.20.130.10 305 490 1.6E-62 T 12-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 Vc3S01_1280 17acd858330055569f55c7acda17397d 505 SUPERFAMILY SSF117457 317 489 4.58E-64 T 12-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 Vc3S01_A0288 3665dedfda5f7918e5ca0a265920b9e2 271 SUPERFAMILY SSF56784 6 260 5.36E-53 T 12-10-2018 IPR036412 HAD-like superfamily Vc3S01_A0288 3665dedfda5f7918e5ca0a265920b9e2 271 Gene3D G3DSA:3.40.50.1000 8 271 6.3E-97 T 12-10-2018 IPR023214 HAD superfamily Vc3S01_A0288 3665dedfda5f7918e5ca0a265920b9e2 271 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 73 205 2.3E-14 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Vc3S01_A0288 3665dedfda5f7918e5ca0a265920b9e2 271 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 205 5.6E-10 T 12-10-2018 Vc3S01_A0288 3665dedfda5f7918e5ca0a265920b9e2 271 Gene3D G3DSA:1.10.150.240 24 102 6.3E-97 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Vc3S01_A0288 3665dedfda5f7918e5ca0a265920b9e2 271 TIGRFAM TIGR01422 phosphonatase: phosphonoacetaldehyde hydrolase 6 259 6.7E-118 T 12-10-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 Vc3S01_A0288 3665dedfda5f7918e5ca0a265920b9e2 271 Hamap MF_01375 Phosphonoacetaldehyde hydrolase [phnX]. 1 271 142.11 T 12-10-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 Vc3S01_A1272 85061c932d783444b86d9ebfdcb68ea6 199 Gene3D G3DSA:1.10.10.10 135 199 5.1E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A1272 85061c932d783444b86d9ebfdcb68ea6 199 ProSitePatterns PS00622 LuxR-type HTH domain signature. 157 184 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_A1272 85061c932d783444b86d9ebfdcb68ea6 199 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 173 2.2E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_A1272 85061c932d783444b86d9ebfdcb68ea6 199 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 185 2.2E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_A1272 85061c932d783444b86d9ebfdcb68ea6 199 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 143 157 2.2E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_A1272 85061c932d783444b86d9ebfdcb68ea6 199 SUPERFAMILY SSF52172 2 127 1.71E-26 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_A1272 85061c932d783444b86d9ebfdcb68ea6 199 SMART SM00421 140 197 5.1E-18 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_A1272 85061c932d783444b86d9ebfdcb68ea6 199 Gene3D G3DSA:3.40.50.2300 2 134 2.7E-25 T 12-10-2018 Vc3S01_A1272 85061c932d783444b86d9ebfdcb68ea6 199 Pfam PF00072 Response regulator receiver domain 8 118 1.2E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A1272 85061c932d783444b86d9ebfdcb68ea6 199 SMART SM00448 5 118 8.9E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A1272 85061c932d783444b86d9ebfdcb68ea6 199 Pfam PF00196 Bacterial regulatory proteins, luxR family 142 195 3.6E-20 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_A1272 85061c932d783444b86d9ebfdcb68ea6 199 SUPERFAMILY SSF46894 134 195 2.69E-17 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Vc3S01_A1263 73aa7b015eb7fd8b6cbc2ca10c6c08be 128 Pfam PF01124 MAPEG family 3 119 9.8E-25 T 12-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein Vc3S01_A1263 73aa7b015eb7fd8b6cbc2ca10c6c08be 128 SUPERFAMILY SSF161084 2 124 1.44E-31 T 12-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily Vc3S01_A1263 73aa7b015eb7fd8b6cbc2ca10c6c08be 128 Gene3D G3DSA:1.20.120.550 1 124 3.7E-28 T 12-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily Vc3S01_1638 bdb52d5c356ecc1237895a0f512ac5a0 83 SUPERFAMILY SSF52833 4 76 4.93E-13 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Vc3S01_1638 bdb52d5c356ecc1237895a0f512ac5a0 83 Pfam PF05768 Glutaredoxin-like domain (DUF836) 5 74 4.1E-18 T 12-10-2018 IPR008554 Glutaredoxin-like Vc3S01_1638 bdb52d5c356ecc1237895a0f512ac5a0 83 Gene3D G3DSA:3.40.30.10 4 83 7.1E-20 T 12-10-2018 Vc3S01_0696 8219f264743291af280d69e3dc2dd6c5 386 PIRSF PIRSF000530 1 385 3.1E-127 T 12-10-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 Vc3S01_0696 8219f264743291af280d69e3dc2dd6c5 386 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 122 133 - T 12-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 Vc3S01_0696 8219f264743291af280d69e3dc2dd6c5 386 Gene3D G3DSA:3.30.230.10 23 202 1.9E-132 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Vc3S01_0696 8219f264743291af280d69e3dc2dd6c5 386 Pfam PF10509 Galactokinase galactose-binding signature 11 59 5.8E-22 T 12-10-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 Vc3S01_0696 8219f264743291af280d69e3dc2dd6c5 386 SUPERFAMILY SSF54211 2 204 3.34E-65 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Vc3S01_0696 8219f264743291af280d69e3dc2dd6c5 386 ProSitePatterns PS00106 Galactokinase signature. 28 39 - T 12-10-2018 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 Vc3S01_0696 8219f264743291af280d69e3dc2dd6c5 386 PRINTS PR00473 Galactokinase signature 93 104 9.4E-30 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 Vc3S01_0696 8219f264743291af280d69e3dc2dd6c5 386 PRINTS PR00473 Galactokinase signature 264 278 9.4E-30 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 Vc3S01_0696 8219f264743291af280d69e3dc2dd6c5 386 PRINTS PR00473 Galactokinase signature 113 131 9.4E-30 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 Vc3S01_0696 8219f264743291af280d69e3dc2dd6c5 386 PRINTS PR00473 Galactokinase signature 28 46 9.4E-30 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 Vc3S01_0696 8219f264743291af280d69e3dc2dd6c5 386 Gene3D G3DSA:3.30.70.890 203 358 1.9E-132 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Vc3S01_0696 8219f264743291af280d69e3dc2dd6c5 386 SUPERFAMILY SSF55060 205 382 4.0E-53 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Vc3S01_0696 8219f264743291af280d69e3dc2dd6c5 386 TIGRFAM TIGR00131 gal_kin: galactokinase 6 381 2.1E-147 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 Vc3S01_0696 8219f264743291af280d69e3dc2dd6c5 386 Pfam PF08544 GHMP kinases C terminal 280 361 1.1E-10 T 12-10-2018 IPR013750 GHMP kinase, C-terminal domain Vc3S01_0696 8219f264743291af280d69e3dc2dd6c5 386 PRINTS PR00959 Mevalonate kinase family signature 26 50 8.1E-44 T 12-10-2018 Vc3S01_0696 8219f264743291af280d69e3dc2dd6c5 386 PRINTS PR00959 Mevalonate kinase family signature 120 142 8.1E-44 T 12-10-2018 Vc3S01_0696 8219f264743291af280d69e3dc2dd6c5 386 PRINTS PR00959 Mevalonate kinase family signature 329 346 8.1E-44 T 12-10-2018 Vc3S01_0696 8219f264743291af280d69e3dc2dd6c5 386 PRINTS PR00959 Mevalonate kinase family signature 163 182 8.1E-44 T 12-10-2018 Vc3S01_0696 8219f264743291af280d69e3dc2dd6c5 386 Hamap MF_00246 Galactokinase [galK]. 26 382 44.16 T 12-10-2018 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 Vc3S01_0696 8219f264743291af280d69e3dc2dd6c5 386 Pfam PF00288 GHMP kinases N terminal domain 115 181 7.9E-11 T 12-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 Vc3S01_0455 def183c4563b07432ef9094afcf12c24 416 SUPERFAMILY SSF109604 159 329 3.38E-26 T 12-10-2018 Vc3S01_0455 def183c4563b07432ef9094afcf12c24 416 Gene3D G3DSA:1.10.3210.10 21 329 3.0E-52 T 12-10-2018 Vc3S01_0455 def183c4563b07432ef9094afcf12c24 416 Pfam PF11871 Domain of unknown function (DUF3391) 4 135 1.9E-29 T 12-10-2018 IPR021812 Protein of unknown function DUF3391 Vc3S01_0455 def183c4563b07432ef9094afcf12c24 416 SMART SM00471 163 299 8.7E-8 T 12-10-2018 IPR003607 HD/PDEase domain Vc3S01_0455 def183c4563b07432ef9094afcf12c24 416 TIGRFAM TIGR00277 HDIG: HDIG domain 165 258 6.7E-8 T 12-10-2018 IPR006675 HDIG domain Vc3S01_0455 def183c4563b07432ef9094afcf12c24 416 Pfam PF01966 HD domain 169 289 1.9E-14 T 12-10-2018 IPR006674 HD domain Vc3S01_2524 014261b84193bbe061b987208c1e2557 641 Gene3D G3DSA:3.40.710.10 251 630 9.9E-95 T 12-10-2018 Vc3S01_2524 014261b84193bbe061b987208c1e2557 641 Pfam PF03717 Penicillin-binding Protein dimerisation domain 66 241 4.3E-50 T 12-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 Vc3S01_2524 014261b84193bbe061b987208c1e2557 641 Hamap MF_02081 Peptidoglycan D,D-transpeptidase MrdA [mrdA]. 5 624 53.337 T 12-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Vc3S01_2524 014261b84193bbe061b987208c1e2557 641 Gene3D G3DSA:3.30.1390.30 87 162 4.2E-52 T 12-10-2018 Vc3S01_2524 014261b84193bbe061b987208c1e2557 641 Gene3D G3DSA:3.90.1310.10 66 250 4.2E-52 T 12-10-2018 Vc3S01_2524 014261b84193bbe061b987208c1e2557 641 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 22 620 1.1E-238 T 12-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Vc3S01_2524 014261b84193bbe061b987208c1e2557 641 Pfam PF00905 Penicillin binding protein transpeptidase domain 273 617 5.6E-78 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Vc3S01_2524 014261b84193bbe061b987208c1e2557 641 SUPERFAMILY SSF56519 58 254 2.09E-54 T 12-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 Vc3S01_2524 014261b84193bbe061b987208c1e2557 641 SUPERFAMILY SSF56601 256 619 1.82E-97 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Vc3S01_1745 a2d99e5b7c250cf5a7cbb010a9b8bf73 313 Pfam PF00892 EamA-like transporter family 25 162 5.9E-10 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Vc3S01_1745 a2d99e5b7c250cf5a7cbb010a9b8bf73 313 Pfam PF00892 EamA-like transporter family 179 309 6.4E-18 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Vc3S01_1745 a2d99e5b7c250cf5a7cbb010a9b8bf73 313 SUPERFAMILY SSF103481 233 312 3.53E-13 T 12-10-2018 Vc3S01_1745 a2d99e5b7c250cf5a7cbb010a9b8bf73 313 SUPERFAMILY SSF103481 86 165 1.1E-8 T 12-10-2018 Vc3S01_1503 6486e4ef2e0ee37bd0fcb0ca4f1212c2 328 Pfam PF03150 Di-haem cytochrome c peroxidase 39 186 5.9E-49 T 12-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 Vc3S01_1503 6486e4ef2e0ee37bd0fcb0ca4f1212c2 328 Gene3D G3DSA:1.10.760.10 39 186 1.2E-112 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Vc3S01_1503 6486e4ef2e0ee37bd0fcb0ca4f1212c2 328 Pfam PF00034 Cytochrome c 195 304 9.1E-10 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_1503 6486e4ef2e0ee37bd0fcb0ca4f1212c2 328 SUPERFAMILY SSF46626 173 323 1.73E-41 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Vc3S01_1503 6486e4ef2e0ee37bd0fcb0ca4f1212c2 328 PIRSF PIRSF000294 8 328 1.7E-124 T 12-10-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 Vc3S01_1503 6486e4ef2e0ee37bd0fcb0ca4f1212c2 328 SUPERFAMILY SSF46626 26 174 6.59E-48 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Vc3S01_1503 6486e4ef2e0ee37bd0fcb0ca4f1212c2 328 Gene3D G3DSA:1.10.760.10 37 310 1.2E-112 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Vc3S01_2749 397cc10a39188d4896b8e2feb676589f 238 Gene3D G3DSA:3.40.50.2300 2 122 1.9E-33 T 12-10-2018 Vc3S01_2749 397cc10a39188d4896b8e2feb676589f 238 SMART SM00862 156 232 2.4E-14 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Vc3S01_2749 397cc10a39188d4896b8e2feb676589f 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 2.8E-17 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Vc3S01_2749 397cc10a39188d4896b8e2feb676589f 238 SMART SM00448 4 114 6.6E-38 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_2749 397cc10a39188d4896b8e2feb676589f 238 Gene3D G3DSA:1.10.10.10 123 236 5.0E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_2749 397cc10a39188d4896b8e2feb676589f 238 SUPERFAMILY SSF52172 2 130 1.99E-36 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_2749 397cc10a39188d4896b8e2feb676589f 238 Pfam PF00072 Response regulator receiver domain 6 113 1.1E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_2749 397cc10a39188d4896b8e2feb676589f 238 SUPERFAMILY SSF46894 137 233 9.92E-21 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Vc3S01_p10023 7733ecb7be684374528254c68c0a3334 306 Pfam PF13737 Transposase DDE domain 19 129 1.4E-45 T 12-10-2018 IPR025668 Transposase DDE domain Vc3S01_A0601 7733ecb7be684374528254c68c0a3334 306 Pfam PF13737 Transposase DDE domain 19 129 1.4E-45 T 12-10-2018 IPR025668 Transposase DDE domain Vc3S01_A1421 7733ecb7be684374528254c68c0a3334 306 Pfam PF13737 Transposase DDE domain 19 129 1.4E-45 T 12-10-2018 IPR025668 Transposase DDE domain Vc3S01_A1751 7733ecb7be684374528254c68c0a3334 306 Pfam PF13737 Transposase DDE domain 19 129 1.4E-45 T 12-10-2018 IPR025668 Transposase DDE domain Vc3S01_1480 7733ecb7be684374528254c68c0a3334 306 Pfam PF13737 Transposase DDE domain 19 129 1.4E-45 T 12-10-2018 IPR025668 Transposase DDE domain Vc3S01_p10014 7733ecb7be684374528254c68c0a3334 306 Pfam PF13737 Transposase DDE domain 19 129 1.4E-45 T 12-10-2018 IPR025668 Transposase DDE domain Vc3S01_p10020 7733ecb7be684374528254c68c0a3334 306 Pfam PF13737 Transposase DDE domain 19 129 1.4E-45 T 12-10-2018 IPR025668 Transposase DDE domain Vc3S01_A1519 ce0ddb3800934c79f5496d7f3459f9df 147 SUPERFAMILY SSF55804 1 145 6.41E-36 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 Vc3S01_A1519 ce0ddb3800934c79f5496d7f3459f9df 147 Gene3D G3DSA:3.40.930.10 1 146 2.5E-48 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 Vc3S01_A1519 ce0ddb3800934c79f5496d7f3459f9df 147 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 145 2.3E-32 T 12-10-2018 IPR002178 PTS EIIA type-2 domain Vc3S01_A1647 91954aad18898268e7285e99331b14c4 307 SUPERFAMILY SSF53850 87 304 2.35E-39 T 12-10-2018 Vc3S01_A1647 91954aad18898268e7285e99331b14c4 307 SUPERFAMILY SSF46785 4 112 2.55E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A1647 91954aad18898268e7285e99331b14c4 307 Gene3D G3DSA:3.40.190.10 92 299 5.2E-64 T 12-10-2018 Vc3S01_A1647 91954aad18898268e7285e99331b14c4 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 2.0E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A1647 91954aad18898268e7285e99331b14c4 307 Pfam PF03466 LysR substrate binding domain 89 301 3.6E-42 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_A1647 91954aad18898268e7285e99331b14c4 307 Gene3D G3DSA:3.40.190.10 163 272 5.2E-64 T 12-10-2018 Vc3S01_A1647 91954aad18898268e7285e99331b14c4 307 Gene3D G3DSA:1.10.10.10 3 91 2.1E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_2918 320fb20e346661184450aecd575cb715 206 Pfam PF01479 S4 domain 97 143 2.5E-18 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_2918 320fb20e346661184450aecd575cb715 206 SMART SM01390 3 95 6.8E-50 T 12-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 Vc3S01_2918 320fb20e346661184450aecd575cb715 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 1.6E-32 T 12-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 Vc3S01_2918 320fb20e346661184450aecd575cb715 206 SUPERFAMILY SSF55174 3 206 1.01E-72 T 12-10-2018 Vc3S01_2918 320fb20e346661184450aecd575cb715 206 Gene3D G3DSA:3.10.290.10 103 191 2.2E-36 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Vc3S01_2918 320fb20e346661184450aecd575cb715 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 36.363 T 12-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 Vc3S01_2918 320fb20e346661184450aecd575cb715 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 12-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_2918 320fb20e346661184450aecd575cb715 206 Gene3D G3DSA:1.10.1050.10 1 102 5.8E-45 T 12-10-2018 Vc3S01_2918 320fb20e346661184450aecd575cb715 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 3.4E-85 T 12-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 Vc3S01_2918 320fb20e346661184450aecd575cb715 206 SMART SM00363 96 160 5.9E-20 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_3104 f54291c4c563093461def63cb6362a2e 235 Pfam PF03640 Secreted repeat of unknown function 80 120 2.3E-14 T 12-10-2018 IPR005297 Lipoprotein repeat Vc3S01_3104 f54291c4c563093461def63cb6362a2e 235 Pfam PF03640 Secreted repeat of unknown function 192 233 5.5E-15 T 12-10-2018 IPR005297 Lipoprotein repeat Vc3S01_3104 f54291c4c563093461def63cb6362a2e 235 Pfam PF03640 Secreted repeat of unknown function 20 61 9.7E-9 T 12-10-2018 IPR005297 Lipoprotein repeat Vc3S01_3104 f54291c4c563093461def63cb6362a2e 235 Pfam PF03640 Secreted repeat of unknown function 138 170 4.0E-10 T 12-10-2018 IPR005297 Lipoprotein repeat Vc3S01_2428 9a2742a9423ecfad1fec0564ceaed744 181 SUPERFAMILY SSF56300 2 164 5.55E-37 T 12-10-2018 Vc3S01_2428 9a2742a9423ecfad1fec0564ceaed744 181 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 2 167 3.1E-28 T 12-10-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 Vc3S01_2428 9a2742a9423ecfad1fec0564ceaed744 181 Gene3D G3DSA:3.60.21.10 1 181 2.9E-60 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like Vc3S01_2428 9a2742a9423ecfad1fec0564ceaed744 181 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 2 162 1.5E-22 T 12-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 Vc3S01_1292 406dd13f5e381b074c6430e68ed7256d 100 Gene3D G3DSA:3.30.2310.20 1 96 1.1E-19 T 12-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Vc3S01_1292 406dd13f5e381b074c6430e68ed7256d 100 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 3 85 4.2E-7 T 12-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family Vc3S01_1292 406dd13f5e381b074c6430e68ed7256d 100 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 91 3.6E-18 T 12-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family Vc3S01_2335 45d945aa6c50c77fbe449cb4aa519071 455 Pfam PF02386 Cation transport protein 53 437 2.0E-57 T 12-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 Vc3S01_2335 45d945aa6c50c77fbe449cb4aa519071 455 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 42 427 2.9E-124 T 12-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 Vc3S01_2090 39633dc1990056fe7989fc0828b5074b 259 SUPERFAMILY SSF47240 11 256 5.02E-74 T 12-10-2018 IPR009078 Ferritin-like superfamily Vc3S01_2090 39633dc1990056fe7989fc0828b5074b 259 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 10 252 1.6E-119 T 12-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 Vc3S01_2090 39633dc1990056fe7989fc0828b5074b 259 PIRSF PIRSF020736 2 257 2.0E-92 T 12-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 Vc3S01_2090 39633dc1990056fe7989fc0828b5074b 259 Gene3D G3DSA:1.20.1260.10 7 76 1.9E-16 T 12-10-2018 IPR012347 Ferritin-like Vc3S01_2090 39633dc1990056fe7989fc0828b5074b 259 Gene3D G3DSA:1.20.1260.10 97 259 1.7E-55 T 12-10-2018 IPR012347 Ferritin-like Vc3S01_1084 68e2f50d4ab1210ff8efbbd524961a5b 519 SUPERFAMILY SSF52091 416 498 2.16E-11 T 12-10-2018 IPR036513 STAS domain superfamily Vc3S01_1084 68e2f50d4ab1210ff8efbbd524961a5b 519 Pfam PF01740 STAS domain 417 503 4.4E-5 T 12-10-2018 IPR002645 STAS domain Vc3S01_1084 68e2f50d4ab1210ff8efbbd524961a5b 519 Pfam PF00916 Sulfate permease family 13 374 2.6E-56 T 12-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 Vc3S01_1084 68e2f50d4ab1210ff8efbbd524961a5b 519 Gene3D G3DSA:3.30.750.24 409 499 4.3E-26 T 12-10-2018 IPR036513 STAS domain superfamily Vc3S01_A1350 b751ea050ff2383a357fece1d27e82f6 515 Gene3D G3DSA:3.30.1120.10 398 461 4.4E-99 T 12-10-2018 Vc3S01_A1350 b751ea050ff2383a357fece1d27e82f6 515 Pfam PF00884 Sulfatase 31 356 2.3E-61 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 Vc3S01_A1350 b751ea050ff2383a357fece1d27e82f6 515 SUPERFAMILY SSF53649 27 507 8.9E-126 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Vc3S01_A1350 b751ea050ff2383a357fece1d27e82f6 515 Gene3D G3DSA:3.40.720.10 31 397 4.4E-99 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Vc3S01_0471 245f102989c8beb184bf20f4aab9d9ac 96 SMART SM01152 8 84 2.1E-39 T 12-10-2018 IPR003746 Protein of unknown function DUF167 Vc3S01_0471 245f102989c8beb184bf20f4aab9d9ac 96 TIGRFAM TIGR00251 TIGR00251: TIGR00251 family protein 8 92 1.1E-27 T 12-10-2018 IPR005228 Conserved hypothetical protein CHP00251 Vc3S01_0471 245f102989c8beb184bf20f4aab9d9ac 96 Hamap MF_00634 UPF0235 protein YggU [yggU]. 8 94 20.578 T 12-10-2018 IPR003746 Protein of unknown function DUF167 Vc3S01_0471 245f102989c8beb184bf20f4aab9d9ac 96 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 12 83 7.5E-26 T 12-10-2018 IPR003746 Protein of unknown function DUF167 Vc3S01_0471 245f102989c8beb184bf20f4aab9d9ac 96 SUPERFAMILY SSF69786 4 95 3.01E-32 T 12-10-2018 IPR036591 YggU-like superfamily Vc3S01_0471 245f102989c8beb184bf20f4aab9d9ac 96 Gene3D G3DSA:3.30.1200.10 1 96 8.9E-35 T 12-10-2018 IPR036591 YggU-like superfamily Vc3S01_1137 0a8ba0e3d99c3e4debb02c4dc69a1f66 426 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 2 405 1.5E-101 T 12-10-2018 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type Vc3S01_1137 0a8ba0e3d99c3e4debb02c4dc69a1f66 426 Pfam PF04403 Paraquat-inducible protein A 32 191 4.8E-38 T 12-10-2018 IPR007498 Intermembrane transport protein PqiA-like Vc3S01_1137 0a8ba0e3d99c3e4debb02c4dc69a1f66 426 Pfam PF04403 Paraquat-inducible protein A 248 405 4.9E-54 T 12-10-2018 IPR007498 Intermembrane transport protein PqiA-like Vc3S01_A1827 b6289c0526023bcce69d7bbc75eb2bcf 96 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 73 3.6E-18 T 12-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain Vc3S01_A1827 b6289c0526023bcce69d7bbc75eb2bcf 96 Gene3D G3DSA:3.30.70.100 1 92 4.5E-26 T 12-10-2018 Vc3S01_A1827 b6289c0526023bcce69d7bbc75eb2bcf 96 SUPERFAMILY SSF54909 1 79 6.08E-25 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel Vc3S01_A0496 46639be887e8ee1d0a60defb9dac7b49 150 ProDom PD003655 COPPER ELECTRON AZURIN METAL-BINDING PERIPLASMIC PRECURSOR SIGNAL SEQUENCING DIRECT MEMBRANE 27 149 5.0E-63 T 12-10-2018 Vc3S01_A0496 46639be887e8ee1d0a60defb9dac7b49 150 ProSitePatterns PS00196 Type-1 copper (blue) proteins signature. 127 144 - T 12-10-2018 IPR028871 Blue (type 1) copper protein, binding site Vc3S01_A0496 46639be887e8ee1d0a60defb9dac7b49 150 Gene3D G3DSA:2.60.40.420 23 149 1.6E-44 T 12-10-2018 IPR008972 Cupredoxin Vc3S01_A0496 46639be887e8ee1d0a60defb9dac7b49 150 SUPERFAMILY SSF49503 23 147 1.52E-44 T 12-10-2018 IPR008972 Cupredoxin Vc3S01_A0496 46639be887e8ee1d0a60defb9dac7b49 150 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 23 147 1.8E-23 T 12-10-2018 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 Vc3S01_A0496 46639be887e8ee1d0a60defb9dac7b49 150 TIGRFAM TIGR02695 azurin: azurin 25 149 2.5E-60 T 12-10-2018 IPR014068 Azurin Vc3S01_2743 7ecdf6e3a687f8e0042b2d5d177f8375 426 Gene3D G3DSA:3.90.1380.10 1 79 3.8E-31 T 12-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily Vc3S01_2743 7ecdf6e3a687f8e0042b2d5d177f8375 426 TIGRFAM TIGR00260 thrC: threonine synthase 52 390 6.8E-114 T 12-10-2018 IPR004450 Threonine synthase-like Vc3S01_2743 7ecdf6e3a687f8e0042b2d5d177f8375 426 Gene3D G3DSA:3.40.50.1100 101 399 2.0E-137 T 12-10-2018 Vc3S01_2743 7ecdf6e3a687f8e0042b2d5d177f8375 426 Pfam PF14821 Threonine synthase N terminus 8 78 4.5E-8 T 12-10-2018 IPR029144 Threonine synthase, N-terminal Vc3S01_2743 7ecdf6e3a687f8e0042b2d5d177f8375 426 SUPERFAMILY SSF53686 1 424 2.36E-131 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Vc3S01_2743 7ecdf6e3a687f8e0042b2d5d177f8375 426 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 89 366 5.2E-23 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Vc3S01_2743 7ecdf6e3a687f8e0042b2d5d177f8375 426 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 95 109 - T 12-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 Vc3S01_2743 7ecdf6e3a687f8e0042b2d5d177f8375 426 Gene3D G3DSA:3.40.50.1100 83 392 2.0E-137 T 12-10-2018 Vc3S01_A0887 80d41b537860ec4430f9f2d29ccc9355 103 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 13 87 4.2E-15 T 12-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 Vc3S01_A0887 80d41b537860ec4430f9f2d29ccc9355 103 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 9 101 1.3E-34 T 12-10-2018 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 Vc3S01_0356 9d6664b4a4356c8122af18d3ca7751f9 354 Pfam PF07751 Abi-like protein 13 205 2.0E-11 T 12-10-2018 IPR011664 Abortive infection system protein AbiD/AbiF-like Vc3S01_A1041 cf6b3d281e29bc9f2a740ffd1e396f3c 272 SMART SM00062 39 262 8.4E-47 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Vc3S01_A1041 cf6b3d281e29bc9f2a740ffd1e396f3c 272 SMART SM00079 39 261 0.0016 T 12-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 Vc3S01_A1041 cf6b3d281e29bc9f2a740ffd1e396f3c 272 Gene3D G3DSA:3.40.190.10 32 249 7.8E-62 T 12-10-2018 Vc3S01_A1041 cf6b3d281e29bc9f2a740ffd1e396f3c 272 SUPERFAMILY SSF53850 7 259 5.65E-59 T 12-10-2018 Vc3S01_A1041 cf6b3d281e29bc9f2a740ffd1e396f3c 272 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 40 260 1.0E-51 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Vc3S01_A1041 cf6b3d281e29bc9f2a740ffd1e396f3c 272 Gene3D G3DSA:3.40.190.10 125 216 7.8E-62 T 12-10-2018 Vc3S01_A1144 f020cb7b361de5a572cd40b0341c4b13 443 Gene3D G3DSA:3.20.20.140 82 386 3.4E-130 T 12-10-2018 Vc3S01_A1144 f020cb7b361de5a572cd40b0341c4b13 443 SUPERFAMILY SSF51338 25 95 5.18E-14 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Vc3S01_A1144 f020cb7b361de5a572cd40b0341c4b13 443 SUPERFAMILY SSF51338 372 441 5.76E-13 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Vc3S01_A1144 f020cb7b361de5a572cd40b0341c4b13 443 Pfam PF01979 Amidohydrolase family 77 438 2.2E-32 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Vc3S01_A1144 f020cb7b361de5a572cd40b0341c4b13 443 Gene3D G3DSA:2.30.40.10 30 437 3.4E-130 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Vc3S01_A1144 f020cb7b361de5a572cd40b0341c4b13 443 SUPERFAMILY SSF51556 81 387 2.2E-74 T 12-10-2018 IPR032466 Metal-dependent hydrolase Vc3S01_2814 594da21e29448d9060f845bcc30b62d1 226 Pfam PF01865 Protein of unknown function DUF47 7 223 3.8E-64 T 12-10-2018 IPR018445 Putative phosphate transport regulator Vc3S01_2814 594da21e29448d9060f845bcc30b62d1 226 Gene3D G3DSA:1.20.58.220 1 225 8.1E-65 T 12-10-2018 IPR038078 PhoU-like domain superfamily Vc3S01_2814 594da21e29448d9060f845bcc30b62d1 226 SUPERFAMILY SSF109755 29 216 8.63E-15 T 12-10-2018 Vc3S01_2814 594da21e29448d9060f845bcc30b62d1 226 TIGRFAM TIGR00153 TIGR00153: TIGR00153 family protein 4 225 6.0E-66 T 12-10-2018 IPR002727 Protein of unknown function DUF47 Vc3S01_2144 baec69f3c367d8b95ef4b8d229970052 440 Gene3D G3DSA:3.40.50.12240 16 438 3.0E-152 T 12-10-2018 Vc3S01_2144 baec69f3c367d8b95ef4b8d229970052 440 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 358 2.2E-78 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Vc3S01_2144 baec69f3c367d8b95ef4b8d229970052 440 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 9 437 1.9E-176 T 12-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Vc3S01_2144 baec69f3c367d8b95ef4b8d229970052 440 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 349 358 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Vc3S01_2144 baec69f3c367d8b95ef4b8d229970052 440 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 27 92 1.3E-9 T 12-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Vc3S01_2144 baec69f3c367d8b95ef4b8d229970052 440 SMART SM00382 161 342 5.7E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_2144 baec69f3c367d8b95ef4b8d229970052 440 SUPERFAMILY SSF52540 95 364 1.04E-96 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2144 baec69f3c367d8b95ef4b8d229970052 440 TIGRFAM TIGR02546 III_secr_ATP: type III secretion apparatus H+-transporting two-sector ATPase 21 437 3.2E-201 T 12-10-2018 IPR013380 ATPase, type III secretion system, H+-transporting GO:0005524|GO:0005737|GO:0006754|GO:0030254|GO:0030257|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Vc3S01_2310 8f8d37efb380a06f26fd8eb051a2fca6 288 Gene3D G3DSA:3.90.226.10 3 225 1.7E-83 T 12-10-2018 Vc3S01_2310 8f8d37efb380a06f26fd8eb051a2fca6 288 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 18 287 56.192 T 12-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 Vc3S01_2310 8f8d37efb380a06f26fd8eb051a2fca6 288 Gene3D G3DSA:1.10.12.10 226 276 5.4E-31 T 12-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal Vc3S01_2310 8f8d37efb380a06f26fd8eb051a2fca6 288 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 126 146 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 Vc3S01_2310 8f8d37efb380a06f26fd8eb051a2fca6 288 SUPERFAMILY SSF52096 21 284 8.54E-78 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Vc3S01_2310 8f8d37efb380a06f26fd8eb051a2fca6 288 Pfam PF00378 Enoyl-CoA hydratase/isomerase 34 282 1.7E-77 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 Vc3S01_2310 8f8d37efb380a06f26fd8eb051a2fca6 288 TIGRFAM TIGR01929 menB: naphthoate synthase 25 284 4.8E-145 T 12-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 Vc3S01_2623 283bf08ce6cc98bd7421019cdc363416 74 Pfam PF07191 zinc-ribbons 5 68 8.4E-27 T 12-10-2018 IPR010807 Protein of unknown function DUF1407 Vc3S01_2623 283bf08ce6cc98bd7421019cdc363416 74 SUPERFAMILY SSF161187 4 70 1.11E-26 T 12-10-2018 Vc3S01_2623 283bf08ce6cc98bd7421019cdc363416 74 Gene3D G3DSA:2.10.290.10 2 71 1.3E-26 T 12-10-2018 IPR029037 YfgJ-like Vc3S01_2623 283bf08ce6cc98bd7421019cdc363416 74 ProDom PD060428 YFGJ CYTOPLASMIC VP0614 ECS3372 VC0765 YPO2873 Y1359 STY2763A VV0773 6 68 8.0E-28 T 12-10-2018 IPR010807 Protein of unknown function DUF1407 Vc3S01_A1295 4be24c348637b5fc376b2b2dbe8b4402 491 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 18 490 2.2E-217 T 12-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath Vc3S01_A1295 4be24c348637b5fc376b2b2dbe8b4402 491 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 68 490 1.6E-178 T 12-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath Vc3S01_2536 afb9dfbe0c19cf0261fa4aa9e484886e 474 Pfam PF00367 phosphotransferase system, EIIB 11 43 5.0E-14 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 Vc3S01_2536 afb9dfbe0c19cf0261fa4aa9e484886e 474 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 Vc3S01_2536 afb9dfbe0c19cf0261fa4aa9e484886e 474 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 30 111 3.7E-17 T 12-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 Vc3S01_2536 afb9dfbe0c19cf0261fa4aa9e484886e 474 Gene3D G3DSA:3.30.1360.60 3 78 3.7E-24 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 Vc3S01_2536 afb9dfbe0c19cf0261fa4aa9e484886e 474 Pfam PF02378 Phosphotransferase system, EIIC 112 404 6.3E-34 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 Vc3S01_2536 afb9dfbe0c19cf0261fa4aa9e484886e 474 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 7 460 9.6E-208 T 12-10-2018 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 KEGG: 00500+2.7.1.201 Vc3S01_2536 afb9dfbe0c19cf0261fa4aa9e484886e 474 SUPERFAMILY SSF55604 9 81 4.18E-21 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 Vc3S01_1522 55dc57e58cb129ea65e796cb8ca09829 166 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 21 149 7.6E-25 T 12-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ Vc3S01_0745 2682f5ffe5001617bed4d321307fc918 385 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 2 376 49.202 T 12-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 Vc3S01_0745 2682f5ffe5001617bed4d321307fc918 385 Gene3D G3DSA:3.40.50.150 8 182 2.4E-52 T 12-10-2018 Vc3S01_0745 2682f5ffe5001617bed4d321307fc918 385 Gene3D G3DSA:3.40.50.150 188 380 4.4E-46 T 12-10-2018 Vc3S01_0745 2682f5ffe5001617bed4d321307fc918 385 Pfam PF05175 Methyltransferase small domain 200 373 1.2E-54 T 12-10-2018 IPR007848 Methyltransferase small domain GO:0008168 Vc3S01_0745 2682f5ffe5001617bed4d321307fc918 385 SUPERFAMILY SSF53335 196 370 1.35E-26 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Vc3S01_0745 2682f5ffe5001617bed4d321307fc918 385 PIRSF PIRSF037565 1 377 8.3E-172 T 12-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 Vc3S01_0745 2682f5ffe5001617bed4d321307fc918 385 Pfam PF08468 Methyltransferase small domain N-terminal 47 166 4.2E-6 T 12-10-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 Vc3S01_2015 3e1834296a3befe33b3fc3834f400388 361 Pfam PF13533 Biotin-lipoyl like 62 103 5.6E-12 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain Vc3S01_2015 3e1834296a3befe33b3fc3834f400388 361 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 69 89 9.4E-5 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Vc3S01_2015 3e1834296a3befe33b3fc3834f400388 361 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 346 361 9.4E-5 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Vc3S01_2015 3e1834296a3befe33b3fc3834f400388 361 Gene3D G3DSA:2.40.50.100 57 189 5.8E-69 T 12-10-2018 Vc3S01_2015 3e1834296a3befe33b3fc3834f400388 361 Gene3D G3DSA:1.10.287.470 91 150 5.8E-69 T 12-10-2018 Vc3S01_2015 3e1834296a3befe33b3fc3834f400388 361 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 33 354 2.4E-66 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Vc3S01_2015 3e1834296a3befe33b3fc3834f400388 361 Gene3D G3DSA:2.40.420.20 271 352 5.8E-69 T 12-10-2018 Vc3S01_2015 3e1834296a3befe33b3fc3834f400388 361 Gene3D G3DSA:2.40.30.170 47 270 5.8E-69 T 12-10-2018 Vc3S01_2015 3e1834296a3befe33b3fc3834f400388 361 Pfam PF13437 HlyD family secretion protein 155 253 9.4E-7 T 12-10-2018 Vc3S01_2015 3e1834296a3befe33b3fc3834f400388 361 SUPERFAMILY SSF111369 50 265 1.83E-27 T 12-10-2018 Vc3S01_1851 57958cd88293d20b5ae152fdea007716 225 Pfam PF04172 LrgB-like family 6 218 7.9E-71 T 12-10-2018 IPR007300 CidB/LrgB family Vc3S01_1856 e0f1ac15202c16a5c917a45fcf10f02c 257 SUPERFAMILY SSF81301 63 217 1.29E-16 T 12-10-2018 Vc3S01_1856 e0f1ac15202c16a5c917a45fcf10f02c 257 Gene3D G3DSA:3.30.460.10 61 192 3.7E-6 T 12-10-2018 Vc3S01_1216 dab0fb7c772dd45193aebc635b7c60de 185 Gene3D G3DSA:1.20.120.1760 2 180 5.0E-17 T 12-10-2018 Vc3S01_1216 dab0fb7c772dd45193aebc635b7c60de 185 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 180 5.1E-54 T 12-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 Vc3S01_1216 dab0fb7c772dd45193aebc635b7c60de 185 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Vc3S01_1216 dab0fb7c772dd45193aebc635b7c60de 185 PIRSF PIRSF000847 1 184 3.6E-46 T 12-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 Vc3S01_1216 dab0fb7c772dd45193aebc635b7c60de 185 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 71 1.4E-17 T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Vc3S01_2202 8f2b1adc140d341851fef023185acab8 323 Gene3D G3DSA:3.40.50.150 64 292 4.9E-21 T 12-10-2018 Vc3S01_2202 8f2b1adc140d341851fef023185acab8 323 SUPERFAMILY SSF53335 91 323 1.18E-32 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Vc3S01_2202 8f2b1adc140d341851fef023185acab8 323 Pfam PF08003 Protein of unknown function (DUF1698) 7 322 6.7E-173 T 12-10-2018 IPR027555 tRNA (mo5U34)-methyltransferase-like Vc3S01_2202 8f2b1adc140d341851fef023185acab8 323 Hamap MF_01590 tRNA U34 carboxymethyltransferase [cmoB]. 13 322 54.369 T 12-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 Vc3S01_2202 8f2b1adc140d341851fef023185acab8 323 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 12 321 1.1E-147 T 12-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 Vc3S01_0288 6ce09169e4cd3489b16b3d6c64b12207 238 Pfam PF13309 HTH domain 174 231 1.7E-18 T 12-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain Vc3S01_0288 6ce09169e4cd3489b16b3d6c64b12207 238 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 30 143 1.0E-61 T 12-10-2018 IPR013559 YheO-like Vc3S01_0288 6ce09169e4cd3489b16b3d6c64b12207 238 Pfam PF08348 YheO-like PAS domain 31 139 9.3E-36 T 12-10-2018 IPR013559 YheO-like Vc3S01_2632 a5fa9b5467b6f64f7a72146b125aca0f 375 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 5 353 72.04 T 12-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 Vc3S01_2632 a5fa9b5467b6f64f7a72146b125aca0f 375 Pfam PF04055 Radical SAM superfamily 109 283 1.0E-14 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Vc3S01_2632 a5fa9b5467b6f64f7a72146b125aca0f 375 Gene3D G3DSA:1.10.150.530 1 67 4.8E-26 T 12-10-2018 Vc3S01_2632 a5fa9b5467b6f64f7a72146b125aca0f 375 PIRSF PIRSF006004 3 366 8.1E-145 T 12-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 Vc3S01_2632 a5fa9b5467b6f64f7a72146b125aca0f 375 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 3 359 3.4E-161 T 12-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 Vc3S01_2632 a5fa9b5467b6f64f7a72146b125aca0f 375 SUPERFAMILY SSF102114 103 312 9.68E-14 T 12-10-2018 Vc3S01_2632 a5fa9b5467b6f64f7a72146b125aca0f 375 Gene3D G3DSA:3.20.20.70 68 338 1.3E-112 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_2215 ee7b157008c6b90f66a09fe8189ec524 263 Gene3D G3DSA:3.40.50.150 9 263 2.0E-56 T 12-10-2018 Vc3S01_2215 ee7b157008c6b90f66a09fe8189ec524 263 SUPERFAMILY SSF53335 7 250 6.97E-34 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Vc3S01_2215 ee7b157008c6b90f66a09fe8189ec524 263 Pfam PF08241 Methyltransferase domain 52 148 4.4E-13 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Vc3S01_2215 ee7b157008c6b90f66a09fe8189ec524 263 Hamap MF_02057 tRNA 5-carboxymethoxyuridine methyltransferase [cmoM]. 3 259 40.036 T 12-10-2018 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase GO:0008168 Vc3S01_0913 d5274a4b7288c026116de44fe66f7958 1494 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 1449 1490 3.9E-14 T 12-10-2018 IPR020011 Motility protein FimV, C-terminal Vc3S01_0913 d5274a4b7288c026116de44fe66f7958 1494 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 72 144 1.4E-25 T 12-10-2018 IPR020012 Motility protein FimV, N-terminal Vc3S01_0913 d5274a4b7288c026116de44fe66f7958 1494 Gene3D G3DSA:1.20.58.2200 1433 1491 7.8E-13 T 12-10-2018 IPR038440 FimV, C-terminal domain superfamily Vc3S01_A1764 1abe191e422a79b02f7e58a0b295bfa8 520 PRINTS PR01607 Apyrase family signature 272 292 5.5E-20 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Vc3S01_A1764 1abe191e422a79b02f7e58a0b295bfa8 520 PRINTS PR01607 Apyrase family signature 386 409 5.5E-20 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Vc3S01_A1764 1abe191e422a79b02f7e58a0b295bfa8 520 PRINTS PR01607 Apyrase family signature 29 47 5.5E-20 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Vc3S01_A1764 1abe191e422a79b02f7e58a0b295bfa8 520 PRINTS PR01607 Apyrase family signature 242 265 5.5E-20 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Vc3S01_A1764 1abe191e422a79b02f7e58a0b295bfa8 520 PRINTS PR01607 Apyrase family signature 455 474 5.5E-20 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Vc3S01_A1764 1abe191e422a79b02f7e58a0b295bfa8 520 Gene3D G3DSA:3.60.21.10 26 336 7.1E-81 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like Vc3S01_A1764 1abe191e422a79b02f7e58a0b295bfa8 520 SUPERFAMILY SSF56300 30 330 4.43E-68 T 12-10-2018 Vc3S01_A1764 1abe191e422a79b02f7e58a0b295bfa8 520 Pfam PF02872 5'-nucleotidase, C-terminal domain 341 481 2.4E-43 T 12-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Vc3S01_A1764 1abe191e422a79b02f7e58a0b295bfa8 520 SUPERFAMILY SSF55816 333 516 6.28E-52 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Vc3S01_A1764 1abe191e422a79b02f7e58a0b295bfa8 520 Gene3D G3DSA:3.90.780.10 337 518 2.0E-52 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Vc3S01_A1764 1abe191e422a79b02f7e58a0b295bfa8 520 Pfam PF00149 Calcineurin-like phosphoesterase 32 257 2.3E-11 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Vc3S01_2101 31a70ca442e1a8ca2f07457516cc08b7 340 Gene3D G3DSA:1.10.240.10 191 305 1.7E-100 T 12-10-2018 Vc3S01_2101 31a70ca442e1a8ca2f07457516cc08b7 340 Gene3D G3DSA:3.40.50.620 13 332 1.7E-100 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Vc3S01_2101 31a70ca442e1a8ca2f07457516cc08b7 340 SUPERFAMILY SSF52374 12 337 6.95E-77 T 12-10-2018 Vc3S01_2101 31a70ca442e1a8ca2f07457516cc08b7 340 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 12 337 1.0E-69 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Vc3S01_2101 31a70ca442e1a8ca2f07457516cc08b7 340 Pfam PF00579 tRNA synthetases class I (W and Y) 12 292 7.8E-55 T 12-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Vc3S01_2101 31a70ca442e1a8ca2f07457516cc08b7 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 204 214 2.0E-22 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Vc3S01_2101 31a70ca442e1a8ca2f07457516cc08b7 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 74 93 2.0E-22 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Vc3S01_2101 31a70ca442e1a8ca2f07457516cc08b7 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 152 173 2.0E-22 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Vc3S01_2101 31a70ca442e1a8ca2f07457516cc08b7 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 23 39 2.0E-22 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Vc3S01_A0659 ebbd83c0cf4919681c29bae45b3edee1 85 Gene3D G3DSA:1.10.260.40 9 81 1.1E-34 T 12-10-2018 Vc3S01_A0659 ebbd83c0cf4919681c29bae45b3edee1 85 SUPERFAMILY SSF47413 12 80 2.25E-29 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Vc3S01_A0659 ebbd83c0cf4919681c29bae45b3edee1 85 Pfam PF13693 Winged helix-turn-helix DNA-binding 16 80 4.0E-31 T 12-10-2018 IPR038722 Ner, winged helix-turn-helix DNA-binding domain Vc3S01_1700 174665275297ac7d2920880b3368d0f3 249 Pfam PF03942 DTW domain 30 221 1.3E-38 T 12-10-2018 IPR005636 DTW Vc3S01_1700 174665275297ac7d2920880b3368d0f3 249 SMART SM01144 27 227 3.2E-61 T 12-10-2018 IPR005636 DTW Vc3S01_2160 7ac3b1e89ff6eb12da82a869d5111db5 252 Pfam PF01514 Secretory protein of YscJ/FliF family 16 192 3.8E-23 T 12-10-2018 IPR006182 Secretory protein YscJ/FliF Vc3S01_2160 7ac3b1e89ff6eb12da82a869d5111db5 252 Gene3D G3DSA:3.30.70.1530 24 95 6.5E-25 T 12-10-2018 Vc3S01_2160 7ac3b1e89ff6eb12da82a869d5111db5 252 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 170 182 1.8E-29 T 12-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 Vc3S01_2160 7ac3b1e89ff6eb12da82a869d5111db5 252 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 81 94 1.8E-29 T 12-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 Vc3S01_2160 7ac3b1e89ff6eb12da82a869d5111db5 252 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 121 134 1.8E-29 T 12-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 Vc3S01_2160 7ac3b1e89ff6eb12da82a869d5111db5 252 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 29 39 1.8E-29 T 12-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 Vc3S01_2160 7ac3b1e89ff6eb12da82a869d5111db5 252 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 101 116 1.8E-29 T 12-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 Vc3S01_2160 7ac3b1e89ff6eb12da82a869d5111db5 252 Gene3D G3DSA:3.30.300.30 97 205 4.7E-40 T 12-10-2018 Vc3S01_2160 7ac3b1e89ff6eb12da82a869d5111db5 252 TIGRFAM TIGR02544 III_secr_YscJ: type III secretion apparatus lipoprotein, YscJ/HrcJ family 11 198 7.6E-70 T 12-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 Vc3S01_A0918 33d58c4eee7ca1ea313da1951984e8f8 380 SUPERFAMILY SSF47005 121 163 6.28E-9 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 Vc3S01_A0918 33d58c4eee7ca1ea313da1951984e8f8 380 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 172 379 1.2E-55 T 12-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 Vc3S01_A0918 33d58c4eee7ca1ea313da1951984e8f8 380 Gene3D G3DSA:4.10.320.10 116 163 1.4E-10 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 Vc3S01_A0918 33d58c4eee7ca1ea313da1951984e8f8 380 Pfam PF00364 Biotin-requiring enzyme 3 75 5.1E-16 T 12-10-2018 IPR000089 Biotin/lipoyl attachment Vc3S01_A0918 33d58c4eee7ca1ea313da1951984e8f8 380 SUPERFAMILY SSF51230 2 93 5.1E-24 T 12-10-2018 IPR011053 Single hybrid motif Vc3S01_A0918 33d58c4eee7ca1ea313da1951984e8f8 380 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 26 55 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Vc3S01_A0918 33d58c4eee7ca1ea313da1951984e8f8 380 SUPERFAMILY SSF52777 165 378 4.89E-56 T 12-10-2018 Vc3S01_A0918 33d58c4eee7ca1ea313da1951984e8f8 380 Gene3D G3DSA:3.30.559.10 164 380 3.2E-50 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Vc3S01_A0918 33d58c4eee7ca1ea313da1951984e8f8 380 Pfam PF02817 e3 binding domain 128 160 2.5E-9 T 12-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 Vc3S01_A0918 33d58c4eee7ca1ea313da1951984e8f8 380 Gene3D G3DSA:2.40.50.100 1 98 2.2E-21 T 12-10-2018 Vc3S01_A0795 39242b121359f0392e51539e3ee8a706 140 SMART SM00833 53 136 0.0087 T 12-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal Vc3S01_A2015 5b74e72b19b80e90d1675873491945d5 1538 SUPERFAMILY SSF49373 1035 1130 2.01E-13 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments Vc3S01_A2015 5b74e72b19b80e90d1675873491945d5 1538 SUPERFAMILY SSF49373 642 737 9.42E-11 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments Vc3S01_A2015 5b74e72b19b80e90d1675873491945d5 1538 SUPERFAMILY SSF49373 936 1034 7.59E-17 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments Vc3S01_A2015 5b74e72b19b80e90d1675873491945d5 1538 SUPERFAMILY SSF49373 1233 1329 2.62E-12 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments Vc3S01_A2015 5b74e72b19b80e90d1675873491945d5 1538 SUPERFAMILY SSF49373 1337 1431 4.71E-9 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments Vc3S01_A2015 5b74e72b19b80e90d1675873491945d5 1538 Gene3D G3DSA:2.60.40.10 1234 1333 1.6E-13 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_A2015 5b74e72b19b80e90d1675873491945d5 1538 Gene3D G3DSA:2.60.40.10 1335 1430 1.1E-7 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_A2015 5b74e72b19b80e90d1675873491945d5 1538 Gene3D G3DSA:2.60.40.10 1431 1533 1.4E-7 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_A2015 5b74e72b19b80e90d1675873491945d5 1538 SUPERFAMILY SSF49373 738 834 8.89E-15 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments Vc3S01_A2015 5b74e72b19b80e90d1675873491945d5 1538 SMART SM00634 1240 1331 0.26 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain Vc3S01_A2015 5b74e72b19b80e90d1675873491945d5 1538 SMART SM00634 1340 1430 0.031 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain Vc3S01_A2015 5b74e72b19b80e90d1675873491945d5 1538 SMART SM00634 745 834 0.03 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain Vc3S01_A2015 5b74e72b19b80e90d1675873491945d5 1538 SMART SM00634 1141 1230 0.027 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain Vc3S01_A2015 5b74e72b19b80e90d1675873491945d5 1538 SMART SM00634 644 735 0.17 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain Vc3S01_A2015 5b74e72b19b80e90d1675873491945d5 1538 SMART SM00634 1042 1131 0.019 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain Vc3S01_A2015 5b74e72b19b80e90d1675873491945d5 1538 SMART SM00634 844 933 2.7E-4 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain Vc3S01_A2015 5b74e72b19b80e90d1675873491945d5 1538 SMART SM00634 943 1032 0.0078 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain Vc3S01_A2015 5b74e72b19b80e90d1675873491945d5 1538 SUPERFAMILY SSF49373 1139 1232 1.65E-13 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments Vc3S01_A2015 5b74e72b19b80e90d1675873491945d5 1538 Pfam PF09134 Invasin, domain 3 1143 1227 5.7E-9 T 12-10-2018 IPR015217 Invasin, domain 3 Vc3S01_A2015 5b74e72b19b80e90d1675873491945d5 1538 Pfam PF09134 Invasin, domain 3 843 930 1.6E-8 T 12-10-2018 IPR015217 Invasin, domain 3 Vc3S01_A2015 5b74e72b19b80e90d1675873491945d5 1538 Pfam PF09134 Invasin, domain 3 943 1029 3.0E-11 T 12-10-2018 IPR015217 Invasin, domain 3 Vc3S01_A2015 5b74e72b19b80e90d1675873491945d5 1538 Pfam PF09134 Invasin, domain 3 1041 1128 4.0E-8 T 12-10-2018 IPR015217 Invasin, domain 3 Vc3S01_A2015 5b74e72b19b80e90d1675873491945d5 1538 Pfam PF09134 Invasin, domain 3 1238 1325 1.3E-10 T 12-10-2018 IPR015217 Invasin, domain 3 Vc3S01_A2015 5b74e72b19b80e90d1675873491945d5 1538 Pfam PF09134 Invasin, domain 3 744 831 3.1E-9 T 12-10-2018 IPR015217 Invasin, domain 3 Vc3S01_A2015 5b74e72b19b80e90d1675873491945d5 1538 Pfam PF09134 Invasin, domain 3 650 735 2.4E-9 T 12-10-2018 IPR015217 Invasin, domain 3 Vc3S01_A2015 5b74e72b19b80e90d1675873491945d5 1538 SUPERFAMILY SSF49373 837 933 2.59E-16 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments Vc3S01_A2015 5b74e72b19b80e90d1675873491945d5 1538 Gene3D G3DSA:2.60.40.10 641 740 1.3E-11 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_A2015 5b74e72b19b80e90d1675873491945d5 1538 Gene3D G3DSA:2.60.40.10 840 936 3.3E-16 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_A2015 5b74e72b19b80e90d1675873491945d5 1538 Gene3D G3DSA:2.60.40.10 741 838 4.4E-14 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_A2015 5b74e72b19b80e90d1675873491945d5 1538 Gene3D G3DSA:2.60.40.10 1138 1233 5.4E-13 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_A2015 5b74e72b19b80e90d1675873491945d5 1538 Gene3D G3DSA:2.60.40.10 939 1035 7.1E-14 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_A2015 5b74e72b19b80e90d1675873491945d5 1538 Gene3D G3DSA:2.60.40.10 1038 1133 6.6E-12 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_3128 bc686b2b283ff66313237cf47e4975d4 435 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 12 107 2.0E-20 T 12-10-2018 IPR017508 HipA, N-terminal subdomain 1 Vc3S01_3128 bc686b2b283ff66313237cf47e4975d4 435 Pfam PF13657 HipA N-terminal domain 13 107 1.2E-15 T 12-10-2018 IPR017508 HipA, N-terminal subdomain 1 Vc3S01_3128 bc686b2b283ff66313237cf47e4975d4 435 Pfam PF07804 HipA-like C-terminal domain 149 398 3.0E-48 T 12-10-2018 IPR012893 HipA-like, C-terminal Vc3S01_A1870 9b442a8625a6d1cca6db783e4de004d5 102 SUPERFAMILY SSF55604 23 94 7.06E-20 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 Vc3S01_A1870 9b442a8625a6d1cca6db783e4de004d5 102 Pfam PF00367 phosphotransferase system, EIIB 26 57 3.7E-12 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 Vc3S01_A1870 9b442a8625a6d1cca6db783e4de004d5 102 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 20 82 7.9E-15 T 12-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 Vc3S01_A1870 9b442a8625a6d1cca6db783e4de004d5 102 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 35 52 - T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 Vc3S01_A1870 9b442a8625a6d1cca6db783e4de004d5 102 Gene3D G3DSA:3.30.1360.60 18 98 5.7E-24 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 Vc3S01_A1298 e2b3a4e212e9a7303bb2433c3973f1c3 667 Pfam PF00069 Protein kinase domain 64 244 5.9E-30 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Vc3S01_A1298 e2b3a4e212e9a7303bb2433c3973f1c3 667 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 167 179 - T 12-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 Vc3S01_A1298 e2b3a4e212e9a7303bb2433c3973f1c3 667 Gene3D G3DSA:1.10.510.10 27 303 3.7E-35 T 12-10-2018 Vc3S01_A1298 e2b3a4e212e9a7303bb2433c3973f1c3 667 SMART SM00220 46 305 3.1E-12 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Vc3S01_A1298 e2b3a4e212e9a7303bb2433c3973f1c3 667 SUPERFAMILY SSF56112 64 247 9.44E-37 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily Vc3S01_A0387 6ac7afed1980d23194373866d9b56f8c 146 SUPERFAMILY SSF55961 2 145 9.73E-19 T 12-10-2018 Vc3S01_A0387 6ac7afed1980d23194373866d9b56f8c 146 Gene3D G3DSA:3.30.530.20 1 146 4.2E-16 T 12-10-2018 IPR023393 START-like domain superfamily Vc3S01_2046 6572928a94e0d7b40dd76a0d1e6c0d05 167 SUPERFAMILY SSF54427 28 128 8.32E-34 T 12-10-2018 IPR032710 NTF2-like domain superfamily Vc3S01_2046 6572928a94e0d7b40dd76a0d1e6c0d05 167 Pfam PF02810 SEC-C motif 4 18 3.2E-6 T 12-10-2018 IPR004027 SEC-C motif Vc3S01_2046 6572928a94e0d7b40dd76a0d1e6c0d05 167 Pfam PF02810 SEC-C motif 150 167 4.9E-10 T 12-10-2018 IPR004027 SEC-C motif Vc3S01_2046 6572928a94e0d7b40dd76a0d1e6c0d05 167 Gene3D G3DSA:3.10.450.50 1 167 4.0E-53 T 12-10-2018 Vc3S01_2046 6572928a94e0d7b40dd76a0d1e6c0d05 167 SUPERFAMILY SSF103642 147 167 3.6E-8 T 12-10-2018 Vc3S01_2046 6572928a94e0d7b40dd76a0d1e6c0d05 167 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 1 127 26.299 T 12-10-2018 IPR023006 Uncharacterised protein family UPF0225 Vc3S01_0500 99fcdf0b0c8fc3f6132cb20fc45e00b7 392 SUPERFAMILY SSF51905 3 382 2.73E-48 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_0500 99fcdf0b0c8fc3f6132cb20fc45e00b7 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 1.5E-10 T 12-10-2018 Vc3S01_0500 99fcdf0b0c8fc3f6132cb20fc45e00b7 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 1.5E-10 T 12-10-2018 Vc3S01_0500 99fcdf0b0c8fc3f6132cb20fc45e00b7 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 1.5E-10 T 12-10-2018 Vc3S01_0500 99fcdf0b0c8fc3f6132cb20fc45e00b7 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 1.5E-10 T 12-10-2018 Vc3S01_0500 99fcdf0b0c8fc3f6132cb20fc45e00b7 392 Pfam PF01494 FAD binding domain 4 337 8.6E-24 T 12-10-2018 IPR002938 FAD-binding domain GO:0071949 Vc3S01_0500 99fcdf0b0c8fc3f6132cb20fc45e00b7 392 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 5 388 4.1E-149 T 12-10-2018 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 Vc3S01_0500 99fcdf0b0c8fc3f6132cb20fc45e00b7 392 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 388 1.9E-125 T 12-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 Vc3S01_0500 99fcdf0b0c8fc3f6132cb20fc45e00b7 392 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 12-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 Vc3S01_0500 99fcdf0b0c8fc3f6132cb20fc45e00b7 392 Gene3D G3DSA:3.50.50.60 5 336 9.0E-96 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_0500 99fcdf0b0c8fc3f6132cb20fc45e00b7 392 Gene3D G3DSA:3.30.9.50 81 270 9.0E-96 T 12-10-2018 Vc3S01_A1559 1bf69ef60a823c2b72807049ad534cba 387 SMART SM00422 2 70 1.5E-22 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Vc3S01_A1559 1bf69ef60a823c2b72807049ad534cba 387 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 6.4E-5 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Vc3S01_A1559 1bf69ef60a823c2b72807049ad534cba 387 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 6.4E-5 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Vc3S01_A1559 1bf69ef60a823c2b72807049ad534cba 387 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 6.4E-5 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Vc3S01_A1559 1bf69ef60a823c2b72807049ad534cba 387 Gene3D G3DSA:1.10.1660.10 1 108 4.9E-24 T 12-10-2018 Vc3S01_A1559 1bf69ef60a823c2b72807049ad534cba 387 Pfam PF13649 Methyltransferase domain 187 279 1.5E-14 T 12-10-2018 Vc3S01_A1559 1bf69ef60a823c2b72807049ad534cba 387 SUPERFAMILY SSF46955 2 102 1.87E-23 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily Vc3S01_A1559 1bf69ef60a823c2b72807049ad534cba 387 Pfam PF13411 MerR HTH family regulatory protein 2 69 2.1E-18 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Vc3S01_A1559 1bf69ef60a823c2b72807049ad534cba 387 SUPERFAMILY SSF53335 135 345 1.53E-37 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Vc3S01_A1559 1bf69ef60a823c2b72807049ad534cba 387 Gene3D G3DSA:3.40.50.150 141 386 1.2E-56 T 12-10-2018 Vc3S01_0689 2f6fe22812cd4df2ec96d58129f9afcb 149 Gene3D G3DSA:2.60.120.370 1 142 4.5E-14 T 12-10-2018 IPR037012 YhcH/YjgK/YiaL superfamily Vc3S01_0689 2f6fe22812cd4df2ec96d58129f9afcb 149 SUPERFAMILY SSF51197 1 142 5.22E-25 T 12-10-2018 Vc3S01_0689 2f6fe22812cd4df2ec96d58129f9afcb 149 Pfam PF04074 Domain of unknown function (DUF386) 3 139 1.7E-24 T 12-10-2018 IPR004375 YhcH/YjgK/YiaL family Vc3S01_A1758 cf8b3d9e8fe4628289de4ecc5c6b5426 466 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 374 457 4.4E-33 T 12-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 Vc3S01_A1758 cf8b3d9e8fe4628289de4ecc5c6b5426 466 SUPERFAMILY SSF52794 372 465 2.75E-29 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 Vc3S01_A1758 cf8b3d9e8fe4628289de4ecc5c6b5426 466 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 375 465 4.6E-17 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 Vc3S01_A1758 cf8b3d9e8fe4628289de4ecc5c6b5426 466 Gene3D G3DSA:3.40.50.2300 366 466 1.1E-34 T 12-10-2018 Vc3S01_A1758 cf8b3d9e8fe4628289de4ecc5c6b5426 466 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 13 341 4.4E-76 T 12-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 Vc3S01_A0363 798eb6c03b9dd00637698d509e58ebb3 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 6.0E-29 T 12-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 Vc3S01_A0363 798eb6c03b9dd00637698d509e58ebb3 89 Pfam PF01313 Bacterial export proteins, family 3 7 77 1.7E-26 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Vc3S01_A0363 798eb6c03b9dd00637698d509e58ebb3 89 PIRSF PIRSF004669 1 89 4.6E-26 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Vc3S01_A0363 798eb6c03b9dd00637698d509e58ebb3 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 4.8E-14 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Vc3S01_A0363 798eb6c03b9dd00637698d509e58ebb3 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 4.8E-14 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Vc3S01_A0363 798eb6c03b9dd00637698d509e58ebb3 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 4.8E-14 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Vc3S01_0128 1843592378c85226192ea272f76e77f0 136 Pfam PF03748 Flagellar basal body-associated protein FliL 34 136 2.2E-19 T 12-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 Vc3S01_0174 a7fe7f129311e398727bf9c00abc051e 90 Gene3D G3DSA:4.10.520.10 1 90 4.5E-37 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Vc3S01_0174 a7fe7f129311e398727bf9c00abc051e 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 5.7E-19 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Vc3S01_0174 a7fe7f129311e398727bf9c00abc051e 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 5.7E-19 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Vc3S01_0174 a7fe7f129311e398727bf9c00abc051e 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 5.7E-19 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Vc3S01_0174 a7fe7f129311e398727bf9c00abc051e 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.7E-33 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Vc3S01_0174 a7fe7f129311e398727bf9c00abc051e 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 12-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 Vc3S01_0174 a7fe7f129311e398727bf9c00abc051e 90 SMART SM00411 1 90 1.6E-46 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Vc3S01_0174 a7fe7f129311e398727bf9c00abc051e 90 SUPERFAMILY SSF47729 1 90 5.3E-33 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Vc3S01_A1063 592841ef8cd13d2dd3871576a20cbe44 189 Hamap MF_00780 Protein YceI [yceI]. 1 189 44.792 T 12-10-2018 IPR023480 Uncharacterised protein family UPF0312/YceI Vc3S01_A1063 592841ef8cd13d2dd3871576a20cbe44 189 SUPERFAMILY SSF101874 23 188 2.88E-49 T 12-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily Vc3S01_A1063 592841ef8cd13d2dd3871576a20cbe44 189 Pfam PF04264 YceI-like domain 25 183 1.2E-35 T 12-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like Vc3S01_A1063 592841ef8cd13d2dd3871576a20cbe44 189 SMART SM00867 24 187 3.5E-62 T 12-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like Vc3S01_A1063 592841ef8cd13d2dd3871576a20cbe44 189 Gene3D G3DSA:2.40.128.110 23 189 7.8E-49 T 12-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily Vc3S01_2465 ae0a5dcc7d347f16c99d1efa4cba4b88 308 Pfam PF10135 Rod binding protein 53 102 6.3E-16 T 12-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal Vc3S01_2465 ae0a5dcc7d347f16c99d1efa4cba4b88 308 SMART SM00047 146 307 1.7E-50 T 12-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 Vc3S01_2465 ae0a5dcc7d347f16c99d1efa4cba4b88 308 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 10 305 1.4E-126 T 12-10-2018 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 Vc3S01_2465 ae0a5dcc7d347f16c99d1efa4cba4b88 308 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 169 305 3.3E-21 T 12-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 Vc3S01_2465 ae0a5dcc7d347f16c99d1efa4cba4b88 308 Gene3D G3DSA:1.10.530.10 160 306 9.3E-46 T 12-10-2018 Vc3S01_2465 ae0a5dcc7d347f16c99d1efa4cba4b88 308 PRINTS PR01002 Flagellar protein FlgJ signature 245 266 1.4E-29 T 12-10-2018 Vc3S01_2465 ae0a5dcc7d347f16c99d1efa4cba4b88 308 PRINTS PR01002 Flagellar protein FlgJ signature 223 244 1.4E-29 T 12-10-2018 Vc3S01_2465 ae0a5dcc7d347f16c99d1efa4cba4b88 308 PRINTS PR01002 Flagellar protein FlgJ signature 288 306 1.4E-29 T 12-10-2018 Vc3S01_2465 ae0a5dcc7d347f16c99d1efa4cba4b88 308 PRINTS PR01002 Flagellar protein FlgJ signature 79 101 1.4E-29 T 12-10-2018 Vc3S01_2465 ae0a5dcc7d347f16c99d1efa4cba4b88 308 PRINTS PR01002 Flagellar protein FlgJ signature 182 200 1.4E-29 T 12-10-2018 Vc3S01_2465 ae0a5dcc7d347f16c99d1efa4cba4b88 308 PRINTS PR01002 Flagellar protein FlgJ signature 31 54 1.4E-29 T 12-10-2018 Vc3S01_A1985 328b6ae3459bd741f1ef84c566472108 361 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 108 242 6.0E-31 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Vc3S01_A1985 328b6ae3459bd741f1ef84c566472108 361 Gene3D G3DSA:1.10.287.950 3 251 4.9E-44 T 12-10-2018 Vc3S01_A1985 328b6ae3459bd741f1ef84c566472108 361 SMART SM00283 41 282 1.2E-18 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Vc3S01_A1985 328b6ae3459bd741f1ef84c566472108 361 SUPERFAMILY SSF58104 29 243 4.84E-44 T 12-10-2018 Vc3S01_A1985 328b6ae3459bd741f1ef84c566472108 361 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 216 245 4.1E-9 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Vc3S01_A1985 328b6ae3459bd741f1ef84c566472108 361 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 168 197 4.1E-9 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Vc3S01_A1985 328b6ae3459bd741f1ef84c566472108 361 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 69 98 4.1E-9 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Vc3S01_A1985 328b6ae3459bd741f1ef84c566472108 361 Pfam PF13682 Chemoreceptor zinc-binding domain 258 321 9.9E-15 T 12-10-2018 IPR025991 Chemoreceptor zinc-binding domain Vc3S01_p10059 b91aec787523205677b5e6b2551d4c28 214 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 193 214 3.1E-4 T 12-10-2018 IPR020008 GlyGly-CTERM domain Vc3S01_0220 a5765c3b98ca41af062da2cb67f26fc0 548 Gene3D G3DSA:1.10.560.10 8 521 6.1E-237 T 12-10-2018 IPR027413 GroEL-like equatorial domain superfamily Vc3S01_0220 a5765c3b98ca41af062da2cb67f26fc0 548 PRINTS PR00298 60kDa chaperonin signature 350 375 2.5E-74 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Vc3S01_0220 a5765c3b98ca41af062da2cb67f26fc0 548 PRINTS PR00298 60kDa chaperonin signature 27 53 2.5E-74 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Vc3S01_0220 a5765c3b98ca41af062da2cb67f26fc0 548 PRINTS PR00298 60kDa chaperonin signature 83 110 2.5E-74 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Vc3S01_0220 a5765c3b98ca41af062da2cb67f26fc0 548 PRINTS PR00298 60kDa chaperonin signature 398 419 2.5E-74 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Vc3S01_0220 a5765c3b98ca41af062da2cb67f26fc0 548 PRINTS PR00298 60kDa chaperonin signature 268 291 2.5E-74 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Vc3S01_0220 a5765c3b98ca41af062da2cb67f26fc0 548 SUPERFAMILY SSF48592 7 521 1.6E-75 T 12-10-2018 IPR027413 GroEL-like equatorial domain superfamily Vc3S01_0220 a5765c3b98ca41af062da2cb67f26fc0 548 Gene3D G3DSA:3.30.260.10 138 410 6.1E-237 T 12-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily Vc3S01_0220 a5765c3b98ca41af062da2cb67f26fc0 548 Hamap MF_00600 60 kDa chaperonin [groL]. 2 547 41.484 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Vc3S01_0220 a5765c3b98ca41af062da2cb67f26fc0 548 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 12-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Vc3S01_0220 a5765c3b98ca41af062da2cb67f26fc0 548 Gene3D G3DSA:3.50.7.10 173 379 6.1E-237 T 12-10-2018 IPR027409 GroEL-like apical domain superfamily Vc3S01_0220 a5765c3b98ca41af062da2cb67f26fc0 548 SUPERFAMILY SSF52029 185 376 4.71E-83 T 12-10-2018 IPR027409 GroEL-like apical domain superfamily Vc3S01_0220 a5765c3b98ca41af062da2cb67f26fc0 548 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 5.5E-254 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Vc3S01_0220 a5765c3b98ca41af062da2cb67f26fc0 548 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 2.8E-96 T 12-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 Vc3S01_0220 a5765c3b98ca41af062da2cb67f26fc0 548 SUPERFAMILY SSF54849 137 203 3.43E-24 T 12-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily Vc3S01_A1670 828c4f0b8f40f0c31b6132729c08e5fe 318 Gene3D G3DSA:1.10.10.60 226 318 7.3E-19 T 12-10-2018 Vc3S01_A1670 828c4f0b8f40f0c31b6132729c08e5fe 318 SUPERFAMILY SSF46689 267 317 4.3E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_A1670 828c4f0b8f40f0c31b6132729c08e5fe 318 SMART SM00342 231 313 3.5E-11 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_A1670 828c4f0b8f40f0c31b6132729c08e5fe 318 Pfam PF12833 Helix-turn-helix domain 238 315 9.8E-14 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_A1670 828c4f0b8f40f0c31b6132729c08e5fe 318 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 2 189 2.0E-16 T 12-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal Vc3S01_A0477 62d3507ddb7d3af7d05a3a3e4d161ef0 194 SUPERFAMILY SSF51120 4 174 3.14E-25 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal Vc3S01_A0477 62d3507ddb7d3af7d05a3a3e4d161ef0 194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 46 63 1.0E-4 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 Vc3S01_A0477 62d3507ddb7d3af7d05a3a3e4d161ef0 194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 22 35 0.82 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 Vc3S01_A0477 62d3507ddb7d3af7d05a3a3e4d161ef0 194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 83 99 7.0 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 Vc3S01_A0477 62d3507ddb7d3af7d05a3a3e4d161ef0 194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 101 116 0.018 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 Vc3S01_A0477 62d3507ddb7d3af7d05a3a3e4d161ef0 194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 65 81 1.5 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 Vc3S01_A0477 62d3507ddb7d3af7d05a3a3e4d161ef0 194 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 61 79 - T 12-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site Vc3S01_A0477 62d3507ddb7d3af7d05a3a3e4d161ef0 194 Gene3D G3DSA:2.150.10.10 66 189 9.4E-19 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal Vc3S01_A0477 62d3507ddb7d3af7d05a3a3e4d161ef0 194 PRINTS PR00313 NodO calcium binding signature 74 82 1.1E-12 T 12-10-2018 Vc3S01_A0477 62d3507ddb7d3af7d05a3a3e4d161ef0 194 PRINTS PR00313 NodO calcium binding signature 44 55 1.1E-12 T 12-10-2018 Vc3S01_A0477 62d3507ddb7d3af7d05a3a3e4d161ef0 194 PRINTS PR00313 NodO calcium binding signature 56 64 1.1E-12 T 12-10-2018 Vc3S01_A0477 62d3507ddb7d3af7d05a3a3e4d161ef0 194 PRINTS PR00313 NodO calcium binding signature 110 119 1.1E-12 T 12-10-2018 Vc3S01_A0477 62d3507ddb7d3af7d05a3a3e4d161ef0 194 Gene3D G3DSA:2.150.10.10 1 65 1.4E-9 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal Vc3S01_p30047 95ab92f24b9764d10455ef01c8d7980e 144 Hamap MF_01114 Regulatory protein RecX [recX]. 2 144 12.317 T 12-10-2018 IPR003783 Regulatory protein RecX GO:0006282 Vc3S01_p30047 95ab92f24b9764d10455ef01c8d7980e 144 Gene3D G3DSA:1.10.10.10 52 97 2.5E-11 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_p30047 95ab92f24b9764d10455ef01c8d7980e 144 Pfam PF02631 RecX family 28 143 2.4E-28 T 12-10-2018 IPR003783 Regulatory protein RecX GO:0006282 Vc3S01_p30047 95ab92f24b9764d10455ef01c8d7980e 144 Gene3D G3DSA:1.10.10.10 98 143 1.0E-14 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_2848 977d133148c3cb77e32b831060eb827d 617 SUPERFAMILY SSF55785 343 453 1.18E-19 T 12-10-2018 IPR035965 PAS domain superfamily Vc3S01_2848 977d133148c3cb77e32b831060eb827d 617 SUPERFAMILY SSF103190 198 289 1.8E-24 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Vc3S01_2848 977d133148c3cb77e32b831060eb827d 617 Gene3D G3DSA:3.30.450.20 198 293 1.3E-32 T 12-10-2018 Vc3S01_2848 977d133148c3cb77e32b831060eb827d 617 Pfam PF00990 Diguanylate cyclase, GGDEF domain 458 606 9.8E-36 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_2848 977d133148c3cb77e32b831060eb827d 617 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 335 452 1.9E-14 T 12-10-2018 IPR000014 PAS domain Vc3S01_2848 977d133148c3cb77e32b831060eb827d 617 Pfam PF13426 PAS domain 343 444 1.6E-10 T 12-10-2018 IPR000014 PAS domain Vc3S01_2848 977d133148c3cb77e32b831060eb827d 617 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 453 609 1.3E-38 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_2848 977d133148c3cb77e32b831060eb827d 617 Gene3D G3DSA:3.30.70.270 454 614 2.6E-46 T 12-10-2018 Vc3S01_2848 977d133148c3cb77e32b831060eb827d 617 SMART SM00086 403 445 0.0027 T 12-10-2018 IPR001610 PAC motif Vc3S01_2848 977d133148c3cb77e32b831060eb827d 617 SUPERFAMILY SSF103190 27 197 6.91E-52 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Vc3S01_2848 977d133148c3cb77e32b831060eb827d 617 SUPERFAMILY SSF55073 461 610 2.75E-39 T 12-10-2018 IPR029787 Nucleotide cyclase Vc3S01_2848 977d133148c3cb77e32b831060eb827d 617 SMART SM00267 445 610 4.6E-49 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_2848 977d133148c3cb77e32b831060eb827d 617 Gene3D G3DSA:3.30.450.20 339 453 3.4E-19 T 12-10-2018 Vc3S01_2848 977d133148c3cb77e32b831060eb827d 617 Gene3D G3DSA:1.20.5.170 17 63 1.1E-25 T 12-10-2018 Vc3S01_2848 977d133148c3cb77e32b831060eb827d 617 Gene3D G3DSA:3.30.450.20 64 197 5.9E-43 T 12-10-2018 Vc3S01_1206 a9891279312acef3297d54d97809815a 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 200 3.4E-70 T 12-10-2018 IPR006070 YrdC-like domain GO:0003725 Vc3S01_1206 a9891279312acef3297d54d97809815a 206 Pfam PF01300 Telomere recombination 23 198 5.0E-45 T 12-10-2018 IPR006070 YrdC-like domain GO:0003725 Vc3S01_1206 a9891279312acef3297d54d97809815a 206 SUPERFAMILY SSF55821 1 203 1.28E-63 T 12-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Vc3S01_1206 a9891279312acef3297d54d97809815a 206 Gene3D G3DSA:3.90.870.10 1 205 1.2E-67 T 12-10-2018 Vc3S01_1093 6917185effb91c307f98eb5df3111837 307 SUPERFAMILY SSF55048 128 197 1.31E-18 T 12-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Vc3S01_1093 6917185effb91c307f98eb5df3111837 307 PIRSF PIRSF000446 1 307 2.2E-136 T 12-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 Vc3S01_1093 6917185effb91c307f98eb5df3111837 307 Gene3D G3DSA:3.30.70.250 125 197 3.9E-108 T 12-10-2018 Vc3S01_1093 6917185effb91c307f98eb5df3111837 307 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 307 7.2E-45 T 12-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Vc3S01_1093 6917185effb91c307f98eb5df3111837 307 SUPERFAMILY SSF52151 4 305 3.92E-82 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Vc3S01_1093 6917185effb91c307f98eb5df3111837 307 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 291 3.3E-127 T 12-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 Vc3S01_1093 6917185effb91c307f98eb5df3111837 307 Gene3D G3DSA:3.40.366.10 7 286 3.9E-108 T 12-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Vc3S01_1093 6917185effb91c307f98eb5df3111837 307 Pfam PF00698 Acyl transferase domain 7 291 2.2E-38 T 12-10-2018 IPR014043 Acyl transferase Vc3S01_2113 860d20ddc363511215db732c18d21cf1 545 ProDom PD936484 POLYPROTEIN GLYCOPROTEIN M G2 TRANSMEMBRANE NONSTRUCTURAL MEMBRANE CONTAINS: PRECURSOR SIGNAL 166 531 0.008 T 12-10-2018 Vc3S01_2113 860d20ddc363511215db732c18d21cf1 545 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 337 510 2.9E-42 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Vc3S01_2113 860d20ddc363511215db732c18d21cf1 545 SMART SM00304 214 268 8.3E-15 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Vc3S01_2113 860d20ddc363511215db732c18d21cf1 545 Gene3D G3DSA:1.10.287.950 213 545 6.0E-74 T 12-10-2018 Vc3S01_2113 860d20ddc363511215db732c18d21cf1 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 5.4E-23 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Vc3S01_2113 860d20ddc363511215db732c18d21cf1 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 410 439 5.4E-23 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Vc3S01_2113 860d20ddc363511215db732c18d21cf1 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 381 408 5.4E-23 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Vc3S01_2113 860d20ddc363511215db732c18d21cf1 545 SMART SM00283 283 544 3.4E-72 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Vc3S01_2113 860d20ddc363511215db732c18d21cf1 545 Pfam PF00672 HAMP domain 215 264 8.1E-12 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Vc3S01_2113 860d20ddc363511215db732c18d21cf1 545 SUPERFAMILY SSF58104 236 545 4.97E-75 T 12-10-2018 Vc3S01_2759 67c89e857fe3d66bdd7b3c382b443465 231 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 230 47.858 T 12-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 Vc3S01_2759 67c89e857fe3d66bdd7b3c382b443465 231 Pfam PF01048 Phosphorylase superfamily 2 227 1.5E-48 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 Vc3S01_2759 67c89e857fe3d66bdd7b3c382b443465 231 Gene3D G3DSA:3.40.50.1580 1 231 1.5E-71 T 12-10-2018 Vc3S01_2759 67c89e857fe3d66bdd7b3c382b443465 231 SUPERFAMILY SSF53167 1 228 1.31E-73 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 Vc3S01_2759 67c89e857fe3d66bdd7b3c382b443465 231 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 227 8.7E-102 T 12-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 Vc3S01_1087 a17d791278eb694ec7a11f9dbf5594c3 314 Gene3D G3DSA:3.10.290.10 8 75 2.9E-17 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Vc3S01_1087 a17d791278eb694ec7a11f9dbf5594c3 314 SUPERFAMILY SSF55174 19 71 3.79E-9 T 12-10-2018 Vc3S01_1087 a17d791278eb694ec7a11f9dbf5594c3 314 Gene3D G3DSA:3.30.2350.10 93 314 5.0E-79 T 12-10-2018 Vc3S01_1087 a17d791278eb694ec7a11f9dbf5594c3 314 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 16 308 2.9E-92 T 12-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 Vc3S01_1087 a17d791278eb694ec7a11f9dbf5594c3 314 Pfam PF00849 RNA pseudouridylate synthase 102 247 6.4E-32 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Vc3S01_1087 a17d791278eb694ec7a11f9dbf5594c3 314 SUPERFAMILY SSF55120 91 307 2.08E-64 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Vc3S01_1087 a17d791278eb694ec7a11f9dbf5594c3 314 Pfam PF01479 S4 domain 20 66 2.9E-10 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_1087 a17d791278eb694ec7a11f9dbf5594c3 314 SMART SM00363 20 77 1.6E-8 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_1087 a17d791278eb694ec7a11f9dbf5594c3 314 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 141 155 - T 12-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Vc3S01_0750 f4e25306446731d1d4663c4a63503985 210 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 3 207 9.5E-110 T 12-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 Vc3S01_0750 f4e25306446731d1d4663c4a63503985 210 Pfam PF02508 Rnf-Nqr subunit, membrane protein 9 195 2.6E-62 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 Vc3S01_0750 f4e25306446731d1d4663c4a63503985 210 PIRSF PIRSF006102 3 210 2.0E-73 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 Vc3S01_0750 f4e25306446731d1d4663c4a63503985 210 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 2 207 36.823 T 12-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 Vc3S01_1764 7a9a6b6cad3743b97afa7e6318b59323 300 Pfam PF00480 ROK family 3 296 3.1E-74 T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Vc3S01_1764 7a9a6b6cad3743b97afa7e6318b59323 300 Gene3D G3DSA:3.30.420.40 120 287 4.4E-76 T 12-10-2018 Vc3S01_1764 7a9a6b6cad3743b97afa7e6318b59323 300 SUPERFAMILY SSF53067 1 298 7.98E-56 T 12-10-2018 Vc3S01_1764 7a9a6b6cad3743b97afa7e6318b59323 300 Gene3D G3DSA:3.30.420.40 5 294 4.4E-76 T 12-10-2018 Vc3S01_1764 7a9a6b6cad3743b97afa7e6318b59323 300 ProSitePatterns PS01125 ROK family signature. 131 158 - T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Vc3S01_p30003 314fa6ef2ba790b987505e0e008c4f7f 482 Pfam PF00563 EAL domain 241 470 2.8E-61 T 12-10-2018 IPR001633 EAL domain Vc3S01_p30003 314fa6ef2ba790b987505e0e008c4f7f 482 SMART SM00052 231 475 2.8E-69 T 12-10-2018 IPR001633 EAL domain Vc3S01_p30003 314fa6ef2ba790b987505e0e008c4f7f 482 Gene3D G3DSA:3.20.20.450 237 481 9.3E-71 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_p30003 314fa6ef2ba790b987505e0e008c4f7f 482 SUPERFAMILY SSF141868 239 478 7.59E-67 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_0815 f5bf4215292837427abe2307d83473c5 346 Pfam PF00586 AIR synthase related protein, N-terminal domain 60 165 1.6E-15 T 12-10-2018 IPR016188 PurM-like, N-terminal domain Vc3S01_0815 f5bf4215292837427abe2307d83473c5 346 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 8 345 47.631 T 12-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Vc3S01_0815 f5bf4215292837427abe2307d83473c5 346 Gene3D G3DSA:3.30.1330.10 7 171 1.5E-69 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Vc3S01_0815 f5bf4215292837427abe2307d83473c5 346 Pfam PF02769 AIR synthase related protein, C-terminal domain 178 340 2.3E-40 T 12-10-2018 IPR010918 PurM-like, C-terminal domain Vc3S01_0815 f5bf4215292837427abe2307d83473c5 346 SUPERFAMILY SSF56042 172 341 3.14E-62 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Vc3S01_0815 f5bf4215292837427abe2307d83473c5 346 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 8 335 3.7E-151 T 12-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Vc3S01_0815 f5bf4215292837427abe2307d83473c5 346 Gene3D G3DSA:3.90.650.10 172 346 1.1E-73 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Vc3S01_0815 f5bf4215292837427abe2307d83473c5 346 SUPERFAMILY SSF55326 8 171 1.94E-53 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Vc3S01_2280 d3f0d2893f12d5a29fe263a8eb6fd0c6 386 SUPERFAMILY SSF52980 1 382 8.4E-120 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Vc3S01_2280 d3f0d2893f12d5a29fe263a8eb6fd0c6 386 Gene3D G3DSA:3.40.50.10770 1 140 4.7E-60 T 12-10-2018 Vc3S01_2280 d3f0d2893f12d5a29fe263a8eb6fd0c6 386 Gene3D G3DSA:3.40.1350.10 251 376 1.7E-77 T 12-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 Vc3S01_2280 d3f0d2893f12d5a29fe263a8eb6fd0c6 386 Pfam PF09002 Domain of unknown function (DUF1887) 1 379 2.1E-164 T 12-10-2018 IPR015093 Protein of unknown function DUF1887 Vc3S01_2280 d3f0d2893f12d5a29fe263a8eb6fd0c6 386 Gene3D G3DSA:1.10.10.680 169 250 1.7E-77 T 12-10-2018 Vc3S01_2609 f41f8606186962e1805835d3d70fec0c 580 SUPERFAMILY SSF51556 97 538 2.49E-25 T 12-10-2018 IPR032466 Metal-dependent hydrolase Vc3S01_2609 f41f8606186962e1805835d3d70fec0c 580 Pfam PF07969 Amidohydrolase family 86 578 4.8E-124 T 12-10-2018 IPR013108 Amidohydrolase 3 Vc3S01_2609 f41f8606186962e1805835d3d70fec0c 580 Gene3D G3DSA:2.30.40.10 44 555 9.2E-137 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Vc3S01_2609 f41f8606186962e1805835d3d70fec0c 580 Gene3D G3DSA:3.20.20.140 98 537 9.2E-137 T 12-10-2018 Vc3S01_2609 f41f8606186962e1805835d3d70fec0c 580 Gene3D G3DSA:3.10.310.70 116 246 9.2E-137 T 12-10-2018 Vc3S01_2609 f41f8606186962e1805835d3d70fec0c 580 SUPERFAMILY SSF51338 36 578 2.66E-15 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Vc3S01_2446 73749912503253a0f260de9530947781 539 Pfam PF11658 Cellulose biosynthesis protein BcsG 18 534 9.1E-213 T 12-10-2018 IPR017744 Cellulose biosynthesis protein BcsG Vc3S01_2446 73749912503253a0f260de9530947781 539 TIGRFAM TIGR03368 cellulose_yhjU: cellulose synthase operon protein YhjU 16 537 2.4E-223 T 12-10-2018 IPR017744 Cellulose biosynthesis protein BcsG Vc3S01_p30032 65afd0cb4cc31471c702decce0903d2f 238 Gene3D G3DSA:2.60.40.1720 111 234 1.4E-8 T 12-10-2018 IPR038423 Calcium-dependent cell adhesion molecule, C-terminal domain superfamily Vc3S01_p30032 65afd0cb4cc31471c702decce0903d2f 238 Pfam PF14564 Membrane binding 114 230 2.1E-10 T 12-10-2018 IPR029283 Calcium-dependent cell adhesion molecule 1, membrane-binding domain Vc3S01_p30032 65afd0cb4cc31471c702decce0903d2f 238 Gene3D G3DSA:2.60.20.10 22 106 1.9E-19 T 12-10-2018 Vc3S01_p30032 65afd0cb4cc31471c702decce0903d2f 238 Pfam PF08964 Beta/Gamma crystallin 24 106 3.7E-24 T 12-10-2018 IPR015059 Calcium-dependent cell adhesion molecule, N-terminal GO:0016020|GO:0098609 Vc3S01_A1528 4a97fc0d2ff6694499bb20137cd6d41b 260 SUPERFAMILY SSF46689 207 257 4.93E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_A1528 4a97fc0d2ff6694499bb20137cd6d41b 260 Pfam PF12833 Helix-turn-helix domain 179 255 7.7E-15 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_A1528 4a97fc0d2ff6694499bb20137cd6d41b 260 Gene3D G3DSA:1.10.10.60 152 258 5.7E-22 T 12-10-2018 Vc3S01_A1528 4a97fc0d2ff6694499bb20137cd6d41b 260 SMART SM00342 172 254 1.6E-20 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_2906 409f177b8d2c5f86e1d82f246e482467 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 257 4.7E-64 T 12-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 Vc3S01_2906 409f177b8d2c5f86e1d82f246e482467 302 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 4 302 58.05 T 12-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 Vc3S01_2906 409f177b8d2c5f86e1d82f246e482467 302 PIRSF PIRSF002936 1 302 3.6E-156 T 12-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 Vc3S01_2906 409f177b8d2c5f86e1d82f246e482467 302 SUPERFAMILY SSF52402 6 209 2.33E-74 T 12-10-2018 Vc3S01_2906 409f177b8d2c5f86e1d82f246e482467 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 302 1.9E-163 T 12-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 Vc3S01_2906 409f177b8d2c5f86e1d82f246e482467 302 Gene3D G3DSA:3.40.50.620 7 212 6.9E-66 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Vc3S01_p30066 f8452fe0d2298da5a1be55a92fc673d4 1015 Pfam PF13700 Domain of unknown function (DUF4158) 17 179 1.1E-34 T 12-10-2018 IPR025296 Domain of unknown function DUF4158 Vc3S01_p30066 f8452fe0d2298da5a1be55a92fc673d4 1015 Pfam PF01526 Tn3 transposase DDE domain 602 994 9.3E-105 T 12-10-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 Vc3S01_1931 b7ae21060c1e2c56847b334dfd06cb7d 324 SUPERFAMILY SSF53850 113 323 2.71E-26 T 12-10-2018 Vc3S01_1931 b7ae21060c1e2c56847b334dfd06cb7d 324 Gene3D G3DSA:1.10.10.10 28 115 4.6E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_1931 b7ae21060c1e2c56847b334dfd06cb7d 324 Gene3D G3DSA:3.40.190.10 185 291 9.9E-47 T 12-10-2018 Vc3S01_1931 b7ae21060c1e2c56847b334dfd06cb7d 324 SUPERFAMILY SSF46785 28 135 1.22E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_1931 b7ae21060c1e2c56847b334dfd06cb7d 324 TIGRFAM TIGR02036 dsdC: D-serine deaminase transcriptional activator 22 321 7.5E-153 T 12-10-2018 IPR011781 D-serine deaminase transcriptional activator Vc3S01_1931 b7ae21060c1e2c56847b334dfd06cb7d 324 Gene3D G3DSA:3.40.190.10 125 317 9.9E-47 T 12-10-2018 Vc3S01_1931 b7ae21060c1e2c56847b334dfd06cb7d 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 31 89 3.2E-20 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_1931 b7ae21060c1e2c56847b334dfd06cb7d 324 Pfam PF03466 LysR substrate binding domain 112 320 4.1E-25 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_1931 b7ae21060c1e2c56847b334dfd06cb7d 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 56 66 8.5E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_1931 b7ae21060c1e2c56847b334dfd06cb7d 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 66 77 8.5E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_1931 b7ae21060c1e2c56847b334dfd06cb7d 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 8.5E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_3032 264c237cf334e1de945695956d22e1fd 404 SUPERFAMILY SSF48452 211 384 7.59E-8 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_3032 264c237cf334e1de945695956d22e1fd 404 Gene3D G3DSA:1.25.40.10 269 399 5.6E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_3032 264c237cf334e1de945695956d22e1fd 404 Pfam PF13181 Tetratricopeptide repeat 74 101 0.19 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_3032 264c237cf334e1de945695956d22e1fd 404 Pfam PF13181 Tetratricopeptide repeat 148 179 0.033 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_3032 264c237cf334e1de945695956d22e1fd 404 Gene3D G3DSA:1.25.40.10 106 248 1.8E-14 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_3032 264c237cf334e1de945695956d22e1fd 404 SUPERFAMILY SSF48452 44 246 1.97E-16 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_3032 264c237cf334e1de945695956d22e1fd 404 SMART SM00028 288 321 390.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_3032 264c237cf334e1de945695956d22e1fd 404 SMART SM00028 71 104 0.17 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_3032 264c237cf334e1de945695956d22e1fd 404 SMART SM00028 148 181 1.6 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_3032 264c237cf334e1de945695956d22e1fd 404 Gene3D G3DSA:1.25.40.10 31 102 4.6E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_A0997 61ff831e6901942ed1c712b8ed805299 586 TIGRFAM TIGR02204 MsbA_rel: ABC transporter, permease/ATP-binding protein 7 582 2.8E-282 T 12-10-2018 IPR011918 ABC transporter, ATP-binding/permease protein Vc3S01_A0997 61ff831e6901942ed1c712b8ed805299 586 Gene3D G3DSA:1.20.1560.10 9 333 4.7E-84 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Vc3S01_A0997 61ff831e6901942ed1c712b8ed805299 586 Pfam PF00664 ABC transporter transmembrane region 29 291 5.5E-49 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Vc3S01_A0997 61ff831e6901942ed1c712b8ed805299 586 Pfam PF00005 ABC transporter 363 511 4.2E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_A0997 61ff831e6901942ed1c712b8ed805299 586 ProSitePatterns PS00211 ABC transporters family signature. 483 497 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_A0997 61ff831e6901942ed1c712b8ed805299 586 SUPERFAMILY SSF52540 337 582 3.85E-92 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A0997 61ff831e6901942ed1c712b8ed805299 586 Gene3D G3DSA:3.40.50.300 335 585 7.9E-94 T 12-10-2018 Vc3S01_A0997 61ff831e6901942ed1c712b8ed805299 586 SMART SM00382 371 572 2.2E-18 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_A0997 61ff831e6901942ed1c712b8ed805299 586 SUPERFAMILY SSF90123 14 324 3.66E-74 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Vc3S01_2615 4a918ac4352994657985d4ced9d6573d 418 SUPERFAMILY SSF51905 1 416 3.63E-50 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_2615 4a918ac4352994657985d4ced9d6573d 418 Pfam PF01266 FAD dependent oxidoreductase 3 398 2.4E-72 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Vc3S01_2615 4a918ac4352994657985d4ced9d6573d 418 Gene3D G3DSA:3.30.9.10 134 362 2.7E-53 T 12-10-2018 Vc3S01_2615 4a918ac4352994657985d4ced9d6573d 418 SUPERFAMILY SSF54373 270 360 1.14E-17 T 12-10-2018 Vc3S01_2615 4a918ac4352994657985d4ced9d6573d 418 Gene3D G3DSA:3.50.50.60 1 73 2.4E-10 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_2615 4a918ac4352994657985d4ced9d6573d 418 Gene3D G3DSA:3.50.50.60 95 404 2.7E-53 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_0622 dff0222d103a59b4757d7f3963550aad 98 Gene3D G3DSA:3.30.110.60 1 98 8.1E-37 T 12-10-2018 IPR035920 YhbY-like superfamily Vc3S01_0622 dff0222d103a59b4757d7f3963550aad 98 SMART SM01103 3 86 2.0E-41 T 12-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 Vc3S01_0622 dff0222d103a59b4757d7f3963550aad 98 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 7.4E-21 T 12-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 Vc3S01_0622 dff0222d103a59b4757d7f3963550aad 98 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 98 9.0E-44 T 12-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 Vc3S01_0622 dff0222d103a59b4757d7f3963550aad 98 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 97 1.5E-36 T 12-10-2018 IPR017924 RNA-binding protein YhbY GO:0003723 Vc3S01_0622 dff0222d103a59b4757d7f3963550aad 98 SUPERFAMILY SSF75471 1 94 6.41E-30 T 12-10-2018 IPR035920 YhbY-like superfamily Vc3S01_1950 b2fece096a61f9115f399b8f8201d717 548 SUPERFAMILY SSF53383 27 528 6.88E-116 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Vc3S01_1950 b2fece096a61f9115f399b8f8201d717 548 Gene3D G3DSA:3.90.1150.170 49 524 2.0E-115 T 12-10-2018 Vc3S01_1950 b2fece096a61f9115f399b8f8201d717 548 Gene3D G3DSA:3.40.640.10 122 387 2.0E-115 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Vc3S01_1950 b2fece096a61f9115f399b8f8201d717 548 TIGRFAM TIGR03799 NOD_PanD_pyr: putative pyridoxal-dependent aspartate 1-decarboxylase 6 527 3.0E-299 T 12-10-2018 IPR022517 Aspartate 1-decarboxylase, pyridoxal-dependent KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 Vc3S01_1950 b2fece096a61f9115f399b8f8201d717 548 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 64 442 2.1E-56 T 12-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 Vc3S01_A0128 e46967d4eec23a976efcdc80059b16f5 170 Pfam PF13527 Acetyltransferase (GNAT) domain 19 130 7.5E-18 T 12-10-2018 Vc3S01_A0128 e46967d4eec23a976efcdc80059b16f5 170 SUPERFAMILY SSF55729 18 160 1.06E-23 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_A0128 e46967d4eec23a976efcdc80059b16f5 170 Gene3D G3DSA:3.40.630.30 2 163 1.4E-24 T 12-10-2018 Vc3S01_2889 9578bf6db94cbc3e5d9d8d7b1161d916 119 Pfam PF10973 Protein of unknown function (DUF2799) 29 112 1.2E-19 T 12-10-2018 IPR021242 Protein of unknown function DUF2799 Vc3S01_0482 a862800c0481fd132e55f73985355474 165 Hamap MF_00746 Protein SprT [sprT]. 7 160 42.227 T 12-10-2018 IPR023483 Uncharacterised protein family SprT Vc3S01_0482 a862800c0481fd132e55f73985355474 165 Pfam PF17283 SprT-like zinc ribbon domain 120 160 1.3E-10 T 12-10-2018 IPR035240 SprT-like, zinc ribbon domain Vc3S01_0482 a862800c0481fd132e55f73985355474 165 SMART SM00731 11 160 9.5E-58 T 12-10-2018 IPR006640 SprT-like Vc3S01_0482 a862800c0481fd132e55f73985355474 165 Pfam PF10263 SprT-like family 16 114 5.2E-20 T 12-10-2018 IPR006640 SprT-like Vc3S01_0909 ca829fce5f7f570010d4a79a75bf1f68 403 Gene3D G3DSA:3.40.47.10 258 401 1.5E-49 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 Vc3S01_0909 ca829fce5f7f570010d4a79a75bf1f68 403 SUPERFAMILY SSF53901 1 251 1.84E-67 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 Vc3S01_0909 ca829fce5f7f570010d4a79a75bf1f68 403 SUPERFAMILY SSF53901 213 401 6.69E-62 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 Vc3S01_0909 ca829fce5f7f570010d4a79a75bf1f68 403 SMART SM00825 Beta-ketoacyl synthase 4 403 2.8E-14 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Vc3S01_0909 ca829fce5f7f570010d4a79a75bf1f68 403 Gene3D G3DSA:3.40.47.10 1 253 4.2E-69 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 Vc3S01_0909 ca829fce5f7f570010d4a79a75bf1f68 403 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 244 3.6E-45 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Vc3S01_0909 ca829fce5f7f570010d4a79a75bf1f68 403 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 152 168 - T 12-10-2018 IPR018201 Beta-ketoacyl synthase, active site Vc3S01_0909 ca829fce5f7f570010d4a79a75bf1f68 403 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 358 3.0E-27 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Vc3S01_A1981 d57d5f9b08be6e03882f8a005083fe16 418 SUPERFAMILY SSF142764 3 417 1.96E-130 T 12-10-2018 Vc3S01_A1981 d57d5f9b08be6e03882f8a005083fe16 418 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 255 410 1.6E-38 T 12-10-2018 IPR031475 Four-carbon acid sugar kinase, C-terminal domain Vc3S01_A1981 d57d5f9b08be6e03882f8a005083fe16 418 Gene3D G3DSA:3.40.50.10840 2 235 1.0E-86 T 12-10-2018 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily Vc3S01_A1981 d57d5f9b08be6e03882f8a005083fe16 418 Gene3D G3DSA:3.40.980.20 241 418 5.8E-62 T 12-10-2018 Vc3S01_A1981 d57d5f9b08be6e03882f8a005083fe16 418 Pfam PF07005 Putative sugar-binding N-terminal domain 3 227 3.4E-68 T 12-10-2018 IPR010737 Four-carbon acid sugar kinase, N-terminal domain Vc3S01_p20208 7662a937729e1f568f8b9d3895e09348 585 Pfam PF00665 Integrase core domain 145 291 7.9E-14 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Vc3S01_p20208 7662a937729e1f568f8b9d3895e09348 585 SUPERFAMILY SSF53098 142 303 2.66E-15 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Vc3S01_p20208 7662a937729e1f568f8b9d3895e09348 585 Gene3D G3DSA:3.30.420.10 183 341 4.2E-12 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Vc3S01_A1805 6b8561373a6cb33e773008d4afe5fc50 236 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 230 2.5E-12 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Vc3S01_A1805 6b8561373a6cb33e773008d4afe5fc50 236 SMART SM00862 156 231 1.8E-8 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Vc3S01_A1805 6b8561373a6cb33e773008d4afe5fc50 236 SUPERFAMILY SSF52172 4 127 8.11E-35 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_A1805 6b8561373a6cb33e773008d4afe5fc50 236 Gene3D G3DSA:1.10.10.10 138 235 2.4E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A1805 6b8561373a6cb33e773008d4afe5fc50 236 SUPERFAMILY SSF46894 154 231 2.64E-14 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Vc3S01_A1805 6b8561373a6cb33e773008d4afe5fc50 236 Gene3D G3DSA:3.40.50.2300 2 123 1.6E-31 T 12-10-2018 Vc3S01_A1805 6b8561373a6cb33e773008d4afe5fc50 236 SMART SM00448 5 115 2.4E-36 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A1805 6b8561373a6cb33e773008d4afe5fc50 236 Pfam PF00072 Response regulator receiver domain 7 116 6.8E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_p20033 2bac0485b9b1180bfa6f5b04a906f4f4 234 Pfam PF00717 Peptidase S24-like 148 197 1.4E-4 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C Vc3S01_p20033 2bac0485b9b1180bfa6f5b04a906f4f4 234 SUPERFAMILY SSF51306 138 225 7.72E-15 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Vc3S01_p20033 2bac0485b9b1180bfa6f5b04a906f4f4 234 SUPERFAMILY SSF51306 29 106 2.09E-5 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Vc3S01_p20033 2bac0485b9b1180bfa6f5b04a906f4f4 234 Gene3D G3DSA:2.10.109.10 17 103 1.2E-9 T 12-10-2018 Vc3S01_p20033 2bac0485b9b1180bfa6f5b04a906f4f4 234 Gene3D G3DSA:2.10.109.10 117 227 9.5E-15 T 12-10-2018 Vc3S01_A0232 dde89037470aec9a560c987f8330a654 261 SMART SM00849 10 209 4.8E-16 T 12-10-2018 IPR001279 Metallo-beta-lactamase Vc3S01_A0232 dde89037470aec9a560c987f8330a654 261 Gene3D G3DSA:3.60.15.10 2 232 2.2E-32 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Vc3S01_A0232 dde89037470aec9a560c987f8330a654 261 SUPERFAMILY SSF56281 8 227 1.9E-35 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Vc3S01_A0232 dde89037470aec9a560c987f8330a654 261 Pfam PF00753 Metallo-beta-lactamase superfamily 10 209 1.1E-17 T 12-10-2018 IPR001279 Metallo-beta-lactamase Vc3S01_A1412 f029f47aaf1a591c877acad1beb9d6aa 312 SUPERFAMILY SSF53850 20 296 3.26E-89 T 12-10-2018 Vc3S01_A1412 f029f47aaf1a591c877acad1beb9d6aa 312 TIGRFAM TIGR03414 ABC_choline_bnd: choline ABC transporter, periplasmic binding protein 22 307 3.2E-147 T 12-10-2018 IPR017783 Choline ABC transporter, substrate-binding protein GO:0015871|GO:0033265|GO:0042597 Vc3S01_A1412 f029f47aaf1a591c877acad1beb9d6aa 312 Gene3D G3DSA:3.40.190.100 109 218 9.2E-97 T 12-10-2018 Vc3S01_A1412 f029f47aaf1a591c877acad1beb9d6aa 312 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 27 279 2.9E-61 T 12-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 Vc3S01_A1412 f029f47aaf1a591c877acad1beb9d6aa 312 Gene3D G3DSA:3.40.190.10 28 289 9.2E-97 T 12-10-2018 Vc3S01_A0511 69f10d53f4332add1a264167350ff9e7 258 Gene3D G3DSA:3.40.930.10 106 251 2.8E-18 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 Vc3S01_A0511 69f10d53f4332add1a264167350ff9e7 258 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 128 251 1.5E-21 T 12-10-2018 IPR002178 PTS EIIA type-2 domain Vc3S01_A0511 69f10d53f4332add1a264167350ff9e7 258 Gene3D G3DSA:3.30.1340.10 9 89 1.2E-7 T 12-10-2018 IPR035895 HPr-like superfamily Vc3S01_A0511 69f10d53f4332add1a264167350ff9e7 258 SUPERFAMILY SSF55804 127 249 6.54E-19 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 Vc3S01_A0511 69f10d53f4332add1a264167350ff9e7 258 PIRSF PIRSF029195 1 258 5.1E-167 T 12-10-2018 IPR016910 Uncharacterised conserved protein UCP029195, PTS-EIIA 2 Vc3S01_A0511 69f10d53f4332add1a264167350ff9e7 258 Pfam PF00381 PTS HPr component phosphorylation site 17 84 1.2E-4 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like Vc3S01_A0511 69f10d53f4332add1a264167350ff9e7 258 SUPERFAMILY SSF55594 11 88 1.7E-12 T 12-10-2018 IPR035895 HPr-like superfamily Vc3S01_0389 f9d3072b0e08d39a75801a5109aef4a7 155 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 2.0E-9 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Vc3S01_0389 f9d3072b0e08d39a75801a5109aef4a7 155 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Vc3S01_0389 f9d3072b0e08d39a75801a5109aef4a7 155 Gene3D G3DSA:3.30.700.10 7 155 1.0E-11 T 12-10-2018 Vc3S01_0389 f9d3072b0e08d39a75801a5109aef4a7 155 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 26 7.3E-8 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Vc3S01_0389 f9d3072b0e08d39a75801a5109aef4a7 155 SUPERFAMILY SSF54523 7 91 1.65E-12 T 12-10-2018 Vc3S01_p30124 e8a0fed785870a0e97939c522a89d590 324 Gene3D G3DSA:1.10.10.2830 150 272 1.9E-17 T 12-10-2018 Vc3S01_p30124 e8a0fed785870a0e97939c522a89d590 324 Pfam PF02195 ParB-like nuclease domain 64 127 2.3E-5 T 12-10-2018 IPR003115 ParB/Sulfiredoxin Vc3S01_1953 861ba22858002f7672b90c37cd97a9cf 88 TIGRFAM TIGR02183 GRXA: glutaredoxin, GrxA family 2 85 2.0E-46 T 12-10-2018 IPR011902 Glutaredoxin, GrxA GO:0009055|GO:0015035|GO:0045454 Vc3S01_1953 861ba22858002f7672b90c37cd97a9cf 88 Pfam PF00462 Glutaredoxin 3 69 1.4E-15 T 12-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 Vc3S01_1953 861ba22858002f7672b90c37cd97a9cf 88 SUPERFAMILY SSF52833 3 81 7.42E-21 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Vc3S01_1953 861ba22858002f7672b90c37cd97a9cf 88 PRINTS PR00160 Glutaredoxin signature 66 79 2.8E-11 T 12-10-2018 IPR014025 Glutaredoxin subgroup Vc3S01_1953 861ba22858002f7672b90c37cd97a9cf 88 PRINTS PR00160 Glutaredoxin signature 3 21 2.8E-11 T 12-10-2018 IPR014025 Glutaredoxin subgroup Vc3S01_1953 861ba22858002f7672b90c37cd97a9cf 88 PRINTS PR00160 Glutaredoxin signature 52 65 2.8E-11 T 12-10-2018 IPR014025 Glutaredoxin subgroup Vc3S01_1953 861ba22858002f7672b90c37cd97a9cf 88 Gene3D G3DSA:3.40.30.10 1 84 7.5E-25 T 12-10-2018 Vc3S01_A1999 4bb9b853c55c8876233c651c29d26f34 180 Pfam PF08534 Redoxin 8 148 1.7E-21 T 12-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 Vc3S01_A1999 4bb9b853c55c8876233c651c29d26f34 180 Gene3D G3DSA:3.40.30.10 4 164 5.4E-23 T 12-10-2018 Vc3S01_A1999 4bb9b853c55c8876233c651c29d26f34 180 SUPERFAMILY SSF52833 8 175 1.02E-30 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Vc3S01_3197 149b8a7f1fb0e48334f93c8cab96ea96 490 SUPERFAMILY SSF53686 2 341 1.57E-105 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Vc3S01_3197 149b8a7f1fb0e48334f93c8cab96ea96 490 Gene3D G3DSA:3.40.50.1100 1 303 1.4E-133 T 12-10-2018 Vc3S01_3197 149b8a7f1fb0e48334f93c8cab96ea96 490 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 5 292 1.2E-83 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Vc3S01_3197 149b8a7f1fb0e48334f93c8cab96ea96 490 Gene3D G3DSA:3.40.50.1100 37 133 1.4E-133 T 12-10-2018 Vc3S01_3197 149b8a7f1fb0e48334f93c8cab96ea96 490 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 1 489 5.4E-246 T 12-10-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 Vc3S01_3197 149b8a7f1fb0e48334f93c8cab96ea96 490 SUPERFAMILY SSF55021 313 399 2.24E-27 T 12-10-2018 Vc3S01_3197 149b8a7f1fb0e48334f93c8cab96ea96 490 SUPERFAMILY SSF55021 396 489 6.64E-27 T 12-10-2018 Vc3S01_3197 149b8a7f1fb0e48334f93c8cab96ea96 490 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 305 395 4.0E-25 T 12-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 Vc3S01_3197 149b8a7f1fb0e48334f93c8cab96ea96 490 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 403 489 5.9E-27 T 12-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 Vc3S01_3197 149b8a7f1fb0e48334f93c8cab96ea96 490 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 29 42 - T 12-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 Vc3S01_3197 149b8a7f1fb0e48334f93c8cab96ea96 490 Gene3D G3DSA:3.40.1020.10 314 490 5.2E-72 T 12-10-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 Vc3S01_A0699 bc3c78110e256a7fd1cd23f619c63aa2 492 PIRSF PIRSF007349 1 492 5.3E-158 T 12-10-2018 IPR007067 Tail sheath protein Vc3S01_A0699 bc3c78110e256a7fd1cd23f619c63aa2 492 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 206 366 1.2E-31 T 12-10-2018 IPR035089 Tail sheath protein, subtilisin-like domain Vc3S01_A0699 bc3c78110e256a7fd1cd23f619c63aa2 492 Pfam PF17482 Phage tail sheath C-terminal domain 374 491 6.7E-26 T 12-10-2018 IPR020287 Tail sheath protein, C-terminal domain Vc3S01_1227 9078836bb67c26d014227df8449a3a5d 879 Gene3D G3DSA:1.10.268.10 369 492 3.3E-235 T 12-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Vc3S01_1227 9078836bb67c26d014227df8449a3a5d 879 Gene3D G3DSA:2.120.10.90 534 840 1.4E-127 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal Vc3S01_1227 9078836bb67c26d014227df8449a3a5d 879 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 537 583 2.3E-7 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Vc3S01_1227 9078836bb67c26d014227df8449a3a5d 879 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 587 637 2.8E-9 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Vc3S01_1227 9078836bb67c26d014227df8449a3a5d 879 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 742 788 1.2E-12 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Vc3S01_1227 9078836bb67c26d014227df8449a3a5d 879 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 792 838 2.7E-12 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Vc3S01_1227 9078836bb67c26d014227df8449a3a5d 879 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 644 688 8.9E-9 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Vc3S01_1227 9078836bb67c26d014227df8449a3a5d 879 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 692 736 2.6E-15 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Vc3S01_1227 9078836bb67c26d014227df8449a3a5d 879 SMART SM00434 11 498 8.8E-299 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Vc3S01_1227 9078836bb67c26d014227df8449a3a5d 879 Gene3D G3DSA:3.30.1360.40 236 332 3.3E-235 T 12-10-2018 Vc3S01_1227 9078836bb67c26d014227df8449a3a5d 879 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 1 840 24.614 T 12-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Vc3S01_1227 9078836bb67c26d014227df8449a3a5d 879 Gene3D G3DSA:3.90.199.10 33 520 3.3E-235 T 12-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 Vc3S01_1227 9078836bb67c26d014227df8449a3a5d 879 SUPERFAMILY SSF101904 532 851 4.84E-114 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal Vc3S01_1227 9078836bb67c26d014227df8449a3a5d 879 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 838 0.0 T 12-10-2018 Vc3S01_1227 9078836bb67c26d014227df8449a3a5d 879 SUPERFAMILY SSF56719 30 520 2.22E-187 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Vc3S01_1227 9078836bb67c26d014227df8449a3a5d 879 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 505 4.4E-157 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Vc3S01_0162 1c923abac828972dc91c06d6e2a6e686 1400 Gene3D G3DSA:1.10.1790.20 1135 1313 4.5E-64 T 12-10-2018 Vc3S01_0162 1c923abac828972dc91c06d6e2a6e686 1400 SUPERFAMILY SSF64484 16 1363 0.0 T 12-10-2018 Vc3S01_0162 1c923abac828972dc91c06d6e2a6e686 1400 Gene3D G3DSA:1.10.150.390 1315 1376 1.2E-28 T 12-10-2018 Vc3S01_0162 1c923abac828972dc91c06d6e2a6e686 1400 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 2.1E-27 T 12-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Vc3S01_0162 1c923abac828972dc91c06d6e2a6e686 1400 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 10 1376 18.957 T 12-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Vc3S01_0162 1c923abac828972dc91c06d6e2a6e686 1400 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 4.4E-19 T 12-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Vc3S01_0162 1c923abac828972dc91c06d6e2a6e686 1400 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1366 0.0 T 12-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Vc3S01_0162 1c923abac828972dc91c06d6e2a6e686 1400 Gene3D G3DSA:2.40.50.100 1022 1126 9.2E-29 T 12-10-2018 Vc3S01_0162 1c923abac828972dc91c06d6e2a6e686 1400 Gene3D G3DSA:1.10.132.30 641 790 5.8E-66 T 12-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Vc3S01_0162 1c923abac828972dc91c06d6e2a6e686 1400 Gene3D G3DSA:2.40.50.100 948 1021 2.2E-23 T 12-10-2018 Vc3S01_0162 1c923abac828972dc91c06d6e2a6e686 1400 Gene3D G3DSA:2.40.50.100 1151 1214 4.5E-64 T 12-10-2018 Vc3S01_0162 1c923abac828972dc91c06d6e2a6e686 1400 SMART SM00663 235 514 1.1E-184 T 12-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Vc3S01_0162 1c923abac828972dc91c06d6e2a6e686 1400 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 9.7E-88 T 12-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Vc3S01_0162 1c923abac828972dc91c06d6e2a6e686 1400 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 395 4.5E-8 T 12-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Vc3S01_0162 1c923abac828972dc91c06d6e2a6e686 1400 Pfam PF00623 RNA polymerase Rpb1, domain 2 389 485 1.9E-27 T 12-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Vc3S01_0162 1c923abac828972dc91c06d6e2a6e686 1400 Gene3D G3DSA:1.10.274.100 490 640 1.7E-39 T 12-10-2018 Vc3S01_0162 1c923abac828972dc91c06d6e2a6e686 1400 Gene3D G3DSA:1.10.40.90 374 416 3.1E-22 T 12-10-2018 Vc3S01_0162 1c923abac828972dc91c06d6e2a6e686 1400 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1314 1.5E-77 T 12-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Vc3S01_A0234 111ba8747e1da874141165f520dbed94 301 SUPERFAMILY SSF56059 98 288 1.48E-50 T 12-10-2018 Vc3S01_A0234 111ba8747e1da874141165f520dbed94 301 Gene3D G3DSA:3.40.50.20 1 114 4.6E-41 T 12-10-2018 Vc3S01_A0234 111ba8747e1da874141165f520dbed94 301 Gene3D G3DSA:3.30.1490.20 115 181 2.9E-26 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Vc3S01_A0234 111ba8747e1da874141165f520dbed94 301 Gene3D G3DSA:3.30.470.80 182 299 4.6E-43 T 12-10-2018 Vc3S01_A0234 111ba8747e1da874141165f520dbed94 301 Pfam PF08443 RimK-like ATP-grasp domain 98 286 3.0E-68 T 12-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 Vc3S01_A0234 111ba8747e1da874141165f520dbed94 301 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 3 286 1.5E-85 T 12-10-2018 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 Reactome: R-HSA-70614 Vc3S01_A0234 111ba8747e1da874141165f520dbed94 301 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 52.499 T 12-10-2018 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK Vc3S01_A2009 827ebbd29ab008215dcad439189649fa 325 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 269 282 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 Vc3S01_A2009 827ebbd29ab008215dcad439189649fa 325 SUPERFAMILY SSF53613 1 314 2.49E-67 T 12-10-2018 IPR029056 Ribokinase-like Vc3S01_A2009 827ebbd29ab008215dcad439189649fa 325 Pfam PF00294 pfkB family carbohydrate kinase 1 314 8.6E-61 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB Vc3S01_A2009 827ebbd29ab008215dcad439189649fa 325 Gene3D G3DSA:3.40.1190.20 1 320 5.4E-75 T 12-10-2018 IPR029056 Ribokinase-like Vc3S01_0697 90e3fe11261f24feaac55d7da52f82da 352 TIGRFAM TIGR02636 galM_Leloir: galactose mutarotase 17 350 5.4E-151 T 12-10-2018 IPR013458 Aldose 1-epimerase, bacterial GO:0004034|GO:0006012 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 Vc3S01_0697 90e3fe11261f24feaac55d7da52f82da 352 Pfam PF01263 Aldose 1-epimerase 22 348 4.7E-91 T 12-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 Vc3S01_0697 90e3fe11261f24feaac55d7da52f82da 352 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 176 185 - T 12-10-2018 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 Vc3S01_0697 90e3fe11261f24feaac55d7da52f82da 352 PIRSF PIRSF005096 4 352 6.5E-122 T 12-10-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 Vc3S01_0697 90e3fe11261f24feaac55d7da52f82da 352 SUPERFAMILY SSF74650 7 350 1.26E-108 T 12-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Vc3S01_0697 90e3fe11261f24feaac55d7da52f82da 352 Gene3D G3DSA:2.70.98.10 11 351 6.9E-116 T 12-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 Vc3S01_2780 d3f94056702bad5e854f9fedc274b186 360 Pfam PF00953 Glycosyl transferase family 4 99 283 3.8E-37 T 12-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 Vc3S01_2780 d3f94056702bad5e854f9fedc274b186 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 12-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Vc3S01_2780 d3f94056702bad5e854f9fedc274b186 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 9.3E-6 T 12-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Vc3S01_2780 d3f94056702bad5e854f9fedc274b186 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 25.426 T 12-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Vc3S01_2780 d3f94056702bad5e854f9fedc274b186 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 12-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Vc3S01_2780 d3f94056702bad5e854f9fedc274b186 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 360 5.0E-157 T 12-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Vc3S01_0937 1fbcac46ff59d81cabd3a91e8cea2eb0 464 Gene3D G3DSA:3.90.1150.160 358 464 3.7E-32 T 12-10-2018 Vc3S01_0937 1fbcac46ff59d81cabd3a91e8cea2eb0 464 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 39 368 1.7E-89 T 12-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 Vc3S01_0937 1fbcac46ff59d81cabd3a91e8cea2eb0 464 TIGRFAM TIGR01788 Glu-decarb-GAD: glutamate decarboxylase 17 444 1.9E-199 T 12-10-2018 IPR010107 Glutamate decarboxylase GO:0004351|GO:0006536|GO:0030170 KEGG: 00250+4.1.1.15|KEGG: 00410+4.1.1.15|KEGG: 00430+4.1.1.15|KEGG: 00650+4.1.1.15|MetaCyc: PWY-4321 Vc3S01_0937 1fbcac46ff59d81cabd3a91e8cea2eb0 464 Gene3D G3DSA:3.40.640.10 66 357 2.1E-87 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Vc3S01_0937 1fbcac46ff59d81cabd3a91e8cea2eb0 464 SUPERFAMILY SSF53383 7 446 9.89E-142 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Vc3S01_2799 1c6ccdf83372b81bae671f10599175ee 147 PIRSF PIRSF006318 1 136 2.6E-56 T 12-10-2018 IPR009386 Protein of unknown function DUF1043 Vc3S01_2799 1c6ccdf83372b81bae671f10599175ee 147 Pfam PF06295 Protein of unknown function (DUF1043) 6 129 1.9E-47 T 12-10-2018 IPR009386 Protein of unknown function DUF1043 Vc3S01_2347 3e3a0d7523adc3f47e70d766536acd9f 263 SUPERFAMILY SSF51735 9 262 1.07E-62 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_2347 3e3a0d7523adc3f47e70d766536acd9f 263 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Vc3S01_2347 3e3a0d7523adc3f47e70d766536acd9f 263 Gene3D G3DSA:3.40.50.720 1 263 6.3E-68 T 12-10-2018 Vc3S01_2347 3e3a0d7523adc3f47e70d766536acd9f 263 TIGRFAM TIGR04316 dhbA_paeA: 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase 14 262 8.9E-93 T 12-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 Vc3S01_2347 3e3a0d7523adc3f47e70d766536acd9f 263 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 262 4.2E-47 T 12-10-2018 Vc3S01_2347 3e3a0d7523adc3f47e70d766536acd9f 263 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 176 199 4.3E-47 T 12-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 Vc3S01_2347 3e3a0d7523adc3f47e70d766536acd9f 263 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 241 260 4.3E-47 T 12-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 Vc3S01_2347 3e3a0d7523adc3f47e70d766536acd9f 263 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 110 130 4.3E-47 T 12-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 Vc3S01_2347 3e3a0d7523adc3f47e70d766536acd9f 263 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 17 34 4.3E-47 T 12-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 Vc3S01_2347 3e3a0d7523adc3f47e70d766536acd9f 263 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 90 107 4.3E-47 T 12-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 Vc3S01_2347 3e3a0d7523adc3f47e70d766536acd9f 263 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 215 234 4.3E-47 T 12-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 Vc3S01_2416 f5aecf8945f453a12c9de76d7cb1c400 404 Gene3D G3DSA:1.10.10.10 3 79 3.9E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_2416 f5aecf8945f453a12c9de76d7cb1c400 404 ProSitePatterns PS01125 ROK family signature. 217 244 - T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Vc3S01_2416 f5aecf8945f453a12c9de76d7cb1c400 404 SUPERFAMILY SSF53067 85 391 6.48E-56 T 12-10-2018 Vc3S01_2416 f5aecf8945f453a12c9de76d7cb1c400 404 Gene3D G3DSA:3.30.420.40 207 376 9.0E-94 T 12-10-2018 Vc3S01_2416 f5aecf8945f453a12c9de76d7cb1c400 404 SUPERFAMILY SSF46785 11 75 6.07E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_2416 f5aecf8945f453a12c9de76d7cb1c400 404 Pfam PF00480 ROK family 86 390 1.4E-76 T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Vc3S01_2416 f5aecf8945f453a12c9de76d7cb1c400 404 Gene3D G3DSA:3.30.420.40 90 384 9.0E-94 T 12-10-2018 Vc3S01_2943 b67c847ad62a5c40d2c05037ccb34615 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 3.3E-18 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_2943 b67c847ad62a5c40d2c05037ccb34615 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 3.3E-18 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_2943 b67c847ad62a5c40d2c05037ccb34615 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 3.3E-18 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_2943 b67c847ad62a5c40d2c05037ccb34615 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 12-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_2943 b67c847ad62a5c40d2c05037ccb34615 103 SUPERFAMILY SSF54999 5 101 7.06E-37 T 12-10-2018 IPR036838 Ribosomal protein S10 domain superfamily Vc3S01_2943 b67c847ad62a5c40d2c05037ccb34615 103 Gene3D G3DSA:3.30.70.600 1 103 2.2E-38 T 12-10-2018 IPR036838 Ribosomal protein S10 domain superfamily Vc3S01_2943 b67c847ad62a5c40d2c05037ccb34615 103 SMART SM01403 7 101 6.6E-56 T 12-10-2018 IPR027486 Ribosomal protein S10 domain Vc3S01_2943 b67c847ad62a5c40d2c05037ccb34615 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 2.8E-35 T 12-10-2018 IPR027486 Ribosomal protein S10 domain Vc3S01_2943 b67c847ad62a5c40d2c05037ccb34615 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.1E-45 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_2943 b67c847ad62a5c40d2c05037ccb34615 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 26.839 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_A1214 90cabf6b77c8cc5e69ca4c7f4897f4c7 1433 Pfam PF03527 RHS protein 1033 1069 2.7E-13 T 12-10-2018 IPR001826 RHS protein Vc3S01_A1214 90cabf6b77c8cc5e69ca4c7f4897f4c7 1433 Gene3D G3DSA:2.180.10.10 788 1135 1.7E-37 T 12-10-2018 Vc3S01_A1214 90cabf6b77c8cc5e69ca4c7f4897f4c7 1433 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1060 1135 4.7E-26 T 12-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 Vc3S01_A1214 90cabf6b77c8cc5e69ca4c7f4897f4c7 1433 PRINTS PR00394 RHS protein signature 1027 1047 5.5E-10 T 12-10-2018 IPR001826 RHS protein Vc3S01_A1214 90cabf6b77c8cc5e69ca4c7f4897f4c7 1433 PRINTS PR00394 RHS protein signature 1080 1100 5.5E-10 T 12-10-2018 IPR001826 RHS protein Vc3S01_A1214 90cabf6b77c8cc5e69ca4c7f4897f4c7 1433 PRINTS PR00394 RHS protein signature 1103 1122 5.5E-10 T 12-10-2018 IPR001826 RHS protein Vc3S01_A1214 90cabf6b77c8cc5e69ca4c7f4897f4c7 1433 Pfam PF15604 Novel toxin 15 1280 1424 1.6E-32 T 12-10-2018 IPR028949 Novel toxin 15 Vc3S01_A1214 90cabf6b77c8cc5e69ca4c7f4897f4c7 1433 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 423 457 6.0E-4 T 12-10-2018 IPR006530 YD repeat Vc3S01_A1214 90cabf6b77c8cc5e69ca4c7f4897f4c7 1433 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 958 994 2.3E-4 T 12-10-2018 IPR006530 YD repeat Vc3S01_p30077 4d498c732d7cc7acdbfc90262dab9a2e 97 SUPERFAMILY SSF90257 44 84 4.45E-5 T 12-10-2018 Vc3S01_A0402 2d71f1857c2570075c6240f9702388e2 775 Pfam PF00990 Diguanylate cyclase, GGDEF domain 348 504 1.4E-49 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A0402 2d71f1857c2570075c6240f9702388e2 775 Gene3D G3DSA:3.20.20.450 524 773 3.7E-94 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_A0402 2d71f1857c2570075c6240f9702388e2 775 Pfam PF00563 EAL domain 525 759 4.9E-69 T 12-10-2018 IPR001633 EAL domain Vc3S01_A0402 2d71f1857c2570075c6240f9702388e2 775 SUPERFAMILY SSF55073 353 511 6.67E-53 T 12-10-2018 IPR029787 Nucleotide cyclase Vc3S01_A0402 2d71f1857c2570075c6240f9702388e2 775 SMART SM00052 519 764 1.5E-105 T 12-10-2018 IPR001633 EAL domain Vc3S01_A0402 2d71f1857c2570075c6240f9702388e2 775 Gene3D G3DSA:3.30.70.270 342 523 1.1E-59 T 12-10-2018 Vc3S01_A0402 2d71f1857c2570075c6240f9702388e2 775 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 345 506 3.9E-45 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A0402 2d71f1857c2570075c6240f9702388e2 775 SUPERFAMILY SSF141868 524 772 3.92E-84 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_A0402 2d71f1857c2570075c6240f9702388e2 775 SMART SM00267 337 509 4.5E-59 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_2005 f4372964b6147f0f74688d2072de923b 537 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 320 502 5.6E-44 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Vc3S01_2005 f4372964b6147f0f74688d2072de923b 537 Pfam PF00672 HAMP domain 207 254 3.6E-10 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Vc3S01_2005 f4372964b6147f0f74688d2072de923b 537 SMART SM00283 274 535 7.6E-70 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Vc3S01_2005 f4372964b6147f0f74688d2072de923b 537 SUPERFAMILY SSF58104 232 536 1.96E-73 T 12-10-2018 Vc3S01_2005 f4372964b6147f0f74688d2072de923b 537 SMART SM00304 206 259 3.0E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Vc3S01_2005 f4372964b6147f0f74688d2072de923b 537 Gene3D G3DSA:1.10.287.950 205 537 6.0E-74 T 12-10-2018 Vc3S01_A1435 b6a50990655c424a4c99326b21bfde4b 274 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 121 234 2.3E-13 T 12-10-2018 IPR031571 Flp pilus assembly protein RcpC/CpaB domain Vc3S01_A1314 bfb69cd6c03ed48d81e59fab97aa1164 393 Gene3D G3DSA:3.40.640.10 59 290 9.2E-142 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Vc3S01_A1314 bfb69cd6c03ed48d81e59fab97aa1164 393 Pfam PF00155 Aminotransferase class I and II 47 379 2.3E-30 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Vc3S01_A1314 bfb69cd6c03ed48d81e59fab97aa1164 393 SUPERFAMILY SSF53383 40 386 1.46E-73 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Vc3S01_A1314 bfb69cd6c03ed48d81e59fab97aa1164 393 Gene3D G3DSA:3.90.1150.10 20 382 9.2E-142 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Vc3S01_p20026 bf84ea53ff0b49c73d1001869b638589 201 Gene3D G3DSA:1.10.530.10 52 191 8.7E-10 T 12-10-2018 Vc3S01_p20026 bf84ea53ff0b49c73d1001869b638589 201 Pfam PF01464 Transglycosylase SLT domain 64 175 8.9E-9 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 Vc3S01_p20026 bf84ea53ff0b49c73d1001869b638589 201 SUPERFAMILY SSF53955 63 158 2.75E-12 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily Vc3S01_0216 00da65becf5ad95ac948516c2bd72a74 302 Gene3D G3DSA:3.30.70.1350 207 290 1.3E-30 T 12-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 Vc3S01_0216 00da65becf5ad95ac948516c2bd72a74 302 Pfam PF01545 Cation efflux family 15 206 2.5E-43 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Vc3S01_0216 00da65becf5ad95ac948516c2bd72a74 302 SUPERFAMILY SSF161111 8 207 1.09E-50 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Vc3S01_0216 00da65becf5ad95ac948516c2bd72a74 302 SUPERFAMILY SSF160240 210 287 1.96E-24 T 12-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 Vc3S01_0216 00da65becf5ad95ac948516c2bd72a74 302 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 11 286 7.4E-69 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Vc3S01_0216 00da65becf5ad95ac948516c2bd72a74 302 Gene3D G3DSA:1.20.1510.10 8 206 1.7E-60 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Vc3S01_0216 00da65becf5ad95ac948516c2bd72a74 302 Pfam PF16916 Dimerisation domain of Zinc Transporter 210 286 1.9E-25 T 12-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain Vc3S01_0982 0f411b7b2a9ff9f4b25a77c58207d552 455 Pfam PF14130 Domain of unknown function (DUF4297) 79 292 6.4E-13 T 12-10-2018 IPR025382 Domain of unknown function DUF4297 Vc3S01_0590 53e82ce4c77228419c32ecab7b768c8b 112 SUPERFAMILY SSF54913 1 112 3.5E-45 T 12-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Vc3S01_0590 53e82ce4c77228419c32ecab7b768c8b 112 Gene3D G3DSA:3.30.70.120 1 112 1.8E-46 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Vc3S01_0590 53e82ce4c77228419c32ecab7b768c8b 112 SMART SM00938 4 105 1.8E-68 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Vc3S01_0590 53e82ce4c77228419c32ecab7b768c8b 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 12-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 Vc3S01_0590 53e82ce4c77228419c32ecab7b768c8b 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 12-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 Vc3S01_0590 53e82ce4c77228419c32ecab7b768c8b 112 PRINTS PR00340 P-II protein signature 83 103 1.8E-40 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Vc3S01_0590 53e82ce4c77228419c32ecab7b768c8b 112 PRINTS PR00340 P-II protein signature 23 41 1.8E-40 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Vc3S01_0590 53e82ce4c77228419c32ecab7b768c8b 112 PRINTS PR00340 P-II protein signature 52 75 1.8E-40 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Vc3S01_0590 53e82ce4c77228419c32ecab7b768c8b 112 PRINTS PR00340 P-II protein signature 2 17 1.8E-40 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Vc3S01_0590 53e82ce4c77228419c32ecab7b768c8b 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 9.0E-44 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Vc3S01_0590 53e82ce4c77228419c32ecab7b768c8b 112 PIRSF PIRSF039144 1 112 2.2E-55 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Vc3S01_1163 a9971b24f491b827ed3f6dad63426531 286 Gene3D G3DSA:1.10.10.10 3 93 4.6E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_1163 a9971b24f491b827ed3f6dad63426531 286 SUPERFAMILY SSF46785 4 89 4.87E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_1163 a9971b24f491b827ed3f6dad63426531 286 Pfam PF03466 LysR substrate binding domain 89 285 1.8E-26 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_1163 a9971b24f491b827ed3f6dad63426531 286 SUPERFAMILY SSF53850 89 286 1.99E-30 T 12-10-2018 Vc3S01_1163 a9971b24f491b827ed3f6dad63426531 286 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 2.7E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_1163 a9971b24f491b827ed3f6dad63426531 286 Gene3D G3DSA:3.40.190.290 94 284 4.5E-38 T 12-10-2018 Vc3S01_p30059 27ff7863244400b9be568fa96aade124 493 Gene3D G3DSA:3.40.50.150 123 467 3.2E-86 T 12-10-2018 Vc3S01_p30059 27ff7863244400b9be568fa96aade124 493 Pfam PF12161 HsdM N-terminal domain 8 113 7.8E-14 T 12-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain Vc3S01_p30059 27ff7863244400b9be568fa96aade124 493 Gene3D G3DSA:1.20.1260.30 1 121 1.6E-39 T 12-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily Vc3S01_p30059 27ff7863244400b9be568fa96aade124 493 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 170 184 6.2E-21 T 12-10-2018 Vc3S01_p30059 27ff7863244400b9be568fa96aade124 493 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 296 320 6.2E-21 T 12-10-2018 Vc3S01_p30059 27ff7863244400b9be568fa96aade124 493 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 146 162 6.2E-21 T 12-10-2018 Vc3S01_p30059 27ff7863244400b9be568fa96aade124 493 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 254 266 6.2E-21 T 12-10-2018 Vc3S01_p30059 27ff7863244400b9be568fa96aade124 493 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 257 263 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Vc3S01_p30059 27ff7863244400b9be568fa96aade124 493 SUPERFAMILY SSF53335 5 492 6.78E-127 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Vc3S01_p30059 27ff7863244400b9be568fa96aade124 493 Pfam PF02384 N-6 DNA Methylase 124 415 2.0E-72 T 12-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 Vc3S01_0466 849d00c0bf12ec0a8f847528a0f5519a 342 SUPERFAMILY SSF53335 106 316 1.53E-22 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Vc3S01_0466 849d00c0bf12ec0a8f847528a0f5519a 342 Pfam PF01170 Putative RNA methylase family UPF0020 134 295 1.6E-13 T 12-10-2018 IPR000241 Putative RNA methylase domain Vc3S01_A1053 bbc1e5275c9336fb01dd6691dce9f5e4 584 Gene3D G3DSA:1.10.3210.10 382 583 1.3E-71 T 12-10-2018 Vc3S01_A1053 bbc1e5275c9336fb01dd6691dce9f5e4 584 SUPERFAMILY SSF109604 398 570 5.02E-39 T 12-10-2018 Vc3S01_A1053 bbc1e5275c9336fb01dd6691dce9f5e4 584 SMART SM00471 402 539 1.3E-8 T 12-10-2018 IPR003607 HD/PDEase domain Vc3S01_A1053 bbc1e5275c9336fb01dd6691dce9f5e4 584 Pfam PF01966 HD domain 407 529 6.9E-19 T 12-10-2018 IPR006674 HD domain Vc3S01_A1457 b7e44ce2472830982e5523ee390b5001 230 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 18 209 1.2E-77 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Vc3S01_A1457 b7e44ce2472830982e5523ee390b5001 230 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 14 210 9.8E-74 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Vc3S01_A1457 b7e44ce2472830982e5523ee390b5001 230 SUPERFAMILY SSF55821 9 211 8.24E-81 T 12-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Vc3S01_A1457 b7e44ce2472830982e5523ee390b5001 230 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 12 214 40.699 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Vc3S01_A1457 b7e44ce2472830982e5523ee390b5001 230 Gene3D G3DSA:3.90.870.10 2 214 5.1E-84 T 12-10-2018 Vc3S01_1748 2aa84f30402a879b84d7b65b02b7f855 182 Gene3D G3DSA:2.40.320.10 2 182 1.9E-47 T 12-10-2018 Vc3S01_1748 2aa84f30402a879b84d7b65b02b7f855 182 SMART SM01118 10 181 4.2E-15 T 12-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 Vc3S01_1748 2aa84f30402a879b84d7b65b02b7f855 182 SUPERFAMILY SSF55154 11 178 2.45E-37 T 12-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 Vc3S01_1748 2aa84f30402a879b84d7b65b02b7f855 182 TIGRFAM TIGR00318 cyaB: putative adenylyl cyclase CyaB 11 177 8.2E-18 T 12-10-2018 IPR008173 Adenylyl cyclase CyaB KEGG: 00230+4.6.1.1 Vc3S01_1748 2aa84f30402a879b84d7b65b02b7f855 182 ProDom PD009560 CYCLASE ADENYLATE CYCLASE ADENYLYL CYAB LYASE CLASS CYAB-TYPE THERMOPHILIC MJ0240 11 139 5.0E-9 T 12-10-2018 Vc3S01_1748 2aa84f30402a879b84d7b65b02b7f855 182 Pfam PF01928 CYTH domain 11 175 1.4E-19 T 12-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 Vc3S01_A0396 1322d0f0c84a6248a48d341c9c829d85 227 Pfam PF06468 Spondin_N 40 157 9.3E-10 T 12-10-2018 IPR009465 Spondin, N-terminal Reactome: R-HSA-5083635|Reactome: R-HSA-5173214 Vc3S01_A0396 1322d0f0c84a6248a48d341c9c829d85 227 Gene3D G3DSA:2.60.40.2130 28 169 2.8E-12 T 12-10-2018 IPR038678 Spondin, N-terminal domain superfamily Reactome: R-HSA-5083635|Reactome: R-HSA-5173214 Vc3S01_A0776 3f8cf067c3c14185e23e1d871b29c99e 297 Pfam PF01545 Cation efflux family 14 214 2.8E-32 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Vc3S01_A0776 3f8cf067c3c14185e23e1d871b29c99e 297 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 12 281 2.9E-26 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Vc3S01_A0776 3f8cf067c3c14185e23e1d871b29c99e 297 Gene3D G3DSA:1.20.1510.10 10 214 3.9E-18 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Vc3S01_A0776 3f8cf067c3c14185e23e1d871b29c99e 297 SUPERFAMILY SSF161111 9 214 2.48E-31 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Vc3S01_1108 ff05947b48ab6976a65a5f7033f680fc 707 Gene3D G3DSA:2.40.160.160 145 398 6.3E-58 T 12-10-2018 IPR038177 Inverse autotransporter, beta-domain superfamily Vc3S01_1108 ff05947b48ab6976a65a5f7033f680fc 707 Pfam PF11924 Inverse autotransporter, beta-domain 118 362 3.2E-43 T 12-10-2018 IPR024519 Inverse autotransporter, beta-domain Vc3S01_1989 7b39bbec48dc4f5ccc608375f3efd42b 327 SUPERFAMILY SSF52821 45 182 4.98E-22 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily Vc3S01_1989 7b39bbec48dc4f5ccc608375f3efd42b 327 Gene3D G3DSA:3.40.250.10 193 321 8.7E-31 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily Vc3S01_1989 7b39bbec48dc4f5ccc608375f3efd42b 327 SUPERFAMILY SSF52821 193 314 1.57E-28 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily Vc3S01_1989 7b39bbec48dc4f5ccc608375f3efd42b 327 Pfam PF00581 Rhodanese-like domain 201 309 9.1E-13 T 12-10-2018 IPR001763 Rhodanese-like domain Vc3S01_1989 7b39bbec48dc4f5ccc608375f3efd42b 327 Pfam PF00581 Rhodanese-like domain 101 164 6.0E-8 T 12-10-2018 IPR001763 Rhodanese-like domain Vc3S01_1989 7b39bbec48dc4f5ccc608375f3efd42b 327 ProSitePatterns PS00683 Rhodanese C-terminal signature. 298 308 - T 12-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 Vc3S01_1989 7b39bbec48dc4f5ccc608375f3efd42b 327 SMART SM00450 16 169 0.42 T 12-10-2018 IPR001763 Rhodanese-like domain Vc3S01_1989 7b39bbec48dc4f5ccc608375f3efd42b 327 SMART SM00450 195 314 1.9E-17 T 12-10-2018 IPR001763 Rhodanese-like domain Vc3S01_1989 7b39bbec48dc4f5ccc608375f3efd42b 327 Gene3D G3DSA:3.40.250.10 35 189 4.7E-24 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily Vc3S01_0831 074f26008e423c0f7386f8d1ce5c03ea 378 Gene3D G3DSA:3.40.630.10 9 364 5.0E-128 T 12-10-2018 Vc3S01_0831 074f26008e423c0f7386f8d1ce5c03ea 378 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 99 137 - T 12-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 Vc3S01_0831 074f26008e423c0f7386f8d1ce5c03ea 378 Gene3D G3DSA:3.30.70.360 181 294 5.0E-128 T 12-10-2018 Vc3S01_0831 074f26008e423c0f7386f8d1ce5c03ea 378 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 4 377 51.992 T 12-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 Vc3S01_0831 074f26008e423c0f7386f8d1ce5c03ea 378 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 7 375 9.2E-180 T 12-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 Vc3S01_0831 074f26008e423c0f7386f8d1ce5c03ea 378 Pfam PF07687 Peptidase dimerisation domain 177 284 5.3E-22 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain Vc3S01_0831 074f26008e423c0f7386f8d1ce5c03ea 378 SUPERFAMILY SSF55031 181 291 1.5E-28 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Vc3S01_0831 074f26008e423c0f7386f8d1ce5c03ea 378 SUPERFAMILY SSF53187 6 376 7.6E-67 T 12-10-2018 Vc3S01_0831 074f26008e423c0f7386f8d1ce5c03ea 378 Pfam PF01546 Peptidase family M20/M25/M40 64 373 1.3E-46 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 Vc3S01_A0880 db6f040e94272bc38c4df3f21bdda5d9 301 SUPERFAMILY SSF51735 3 167 1.39E-42 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_A0880 db6f040e94272bc38c4df3f21bdda5d9 301 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 6 297 1.4E-118 T 12-10-2018 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|Reactome: R-HSA-70895 Vc3S01_A0880 db6f040e94272bc38c4df3f21bdda5d9 301 PIRSF PIRSF000103 1 301 1.4E-76 T 12-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 Vc3S01_A0880 db6f040e94272bc38c4df3f21bdda5d9 301 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 166 1.0E-48 T 12-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 Vc3S01_A0880 db6f040e94272bc38c4df3f21bdda5d9 301 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 12-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 Vc3S01_A0880 db6f040e94272bc38c4df3f21bdda5d9 301 Gene3D G3DSA:3.40.50.720 1 167 2.4E-51 T 12-10-2018 Vc3S01_A0880 db6f040e94272bc38c4df3f21bdda5d9 301 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 169 295 1.1E-29 T 12-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 Vc3S01_A0880 db6f040e94272bc38c4df3f21bdda5d9 301 Gene3D G3DSA:1.10.1040.10 169 301 5.3E-43 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Vc3S01_A0880 db6f040e94272bc38c4df3f21bdda5d9 301 SUPERFAMILY SSF48179 168 298 1.59E-39 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Vc3S01_A0323 96d5a6f5b66f491ac16b25a62ba78a58 223 PRINTS PR01008 Flagellar L-ring protein signature 136 151 3.6E-22 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Vc3S01_A0323 96d5a6f5b66f491ac16b25a62ba78a58 223 PRINTS PR01008 Flagellar L-ring protein signature 183 197 3.6E-22 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Vc3S01_A0323 96d5a6f5b66f491ac16b25a62ba78a58 223 PRINTS PR01008 Flagellar L-ring protein signature 199 213 3.6E-22 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Vc3S01_A0323 96d5a6f5b66f491ac16b25a62ba78a58 223 PRINTS PR01008 Flagellar L-ring protein signature 162 178 3.6E-22 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Vc3S01_A0323 96d5a6f5b66f491ac16b25a62ba78a58 223 PRINTS PR01008 Flagellar L-ring protein signature 68 80 3.6E-22 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Vc3S01_A0323 96d5a6f5b66f491ac16b25a62ba78a58 223 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 220 25.29 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Vc3S01_A0323 96d5a6f5b66f491ac16b25a62ba78a58 223 Pfam PF02107 Flagellar L-ring protein 46 220 1.9E-60 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Vc3S01_A1706 969d72037ea8cab7de142a1e10aec910 64 Pfam PF04964 Flp/Fap pilin component 7 51 2.4E-9 T 12-10-2018 IPR007047 Flp/Fap pilin component Vc3S01_1702 ca0f10edd3bbf3aecfba47da16b06041 152 SUPERFAMILY SSF55729 10 124 9.78E-13 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_1702 ca0f10edd3bbf3aecfba47da16b06041 152 Pfam PF13673 Acetyltransferase (GNAT) domain 34 126 2.3E-11 T 12-10-2018 IPR000182 GNAT domain Vc3S01_1702 ca0f10edd3bbf3aecfba47da16b06041 152 Gene3D G3DSA:3.40.630.30 11 131 5.7E-15 T 12-10-2018 Vc3S01_0016 432483a1f269a71ff5ae3d9f154f27bf 63 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 10 60 6.1E-10 T 12-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 Vc3S01_0016 432483a1f269a71ff5ae3d9f154f27bf 63 SUPERFAMILY SSF46955 10 62 1.77E-10 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily Vc3S01_0016 432483a1f269a71ff5ae3d9f154f27bf 63 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 9 60 5.8E-11 T 12-10-2018 IPR010260 DNA-binding transcriptional activator AlpA Vc3S01_0016 432483a1f269a71ff5ae3d9f154f27bf 63 Gene3D G3DSA:1.10.1660.10 6 62 1.7E-6 T 12-10-2018 Vc3S01_A1234 11ce3abc850cee3f6344743ae12a0993 714 Pfam PF00069 Protein kinase domain 91 320 5.5E-38 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Vc3S01_A1234 11ce3abc850cee3f6344743ae12a0993 714 SUPERFAMILY SSF56112 74 324 7.15E-55 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily Vc3S01_A1234 11ce3abc850cee3f6344743ae12a0993 714 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 218 230 - T 12-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 Vc3S01_A1234 11ce3abc850cee3f6344743ae12a0993 714 Gene3D G3DSA:3.30.200.20 80 171 2.3E-25 T 12-10-2018 Vc3S01_A1234 11ce3abc850cee3f6344743ae12a0993 714 SMART SM00220 91 431 2.0E-36 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Vc3S01_A1234 11ce3abc850cee3f6344743ae12a0993 714 Gene3D G3DSA:1.10.510.10 172 419 1.3E-31 T 12-10-2018 Vc3S01_2284 c1099e3078bc75f41244ec3521516569 139 SUPERFAMILY SSF54631 1 127 4.55E-30 T 12-10-2018 Vc3S01_2284 c1099e3078bc75f41244ec3521516569 139 Gene3D G3DSA:3.10.580.10 1 129 3.0E-29 T 12-10-2018 Vc3S01_2284 c1099e3078bc75f41244ec3521516569 139 Pfam PF00571 CBS domain 73 127 3.4E-12 T 12-10-2018 IPR000644 CBS domain Vc3S01_2284 c1099e3078bc75f41244ec3521516569 139 Pfam PF00571 CBS domain 6 61 6.2E-7 T 12-10-2018 IPR000644 CBS domain Vc3S01_2284 c1099e3078bc75f41244ec3521516569 139 SMART SM00116 80 128 5.1E-8 T 12-10-2018 IPR000644 CBS domain Vc3S01_2284 c1099e3078bc75f41244ec3521516569 139 SMART SM00116 13 61 0.43 T 12-10-2018 IPR000644 CBS domain Vc3S01_1627 70c9d0044c6e0baedcc47dab4bbcc2d1 415 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 9 402 2.5E-105 T 12-10-2018 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type Vc3S01_1627 70c9d0044c6e0baedcc47dab4bbcc2d1 415 SUPERFAMILY SSF48695 212 251 7.74E-5 T 12-10-2018 IPR036280 Multiheme cytochrome superfamily Vc3S01_1627 70c9d0044c6e0baedcc47dab4bbcc2d1 415 Pfam PF04403 Paraquat-inducible protein A 55 205 9.2E-36 T 12-10-2018 IPR007498 Intermembrane transport protein PqiA-like Vc3S01_1627 70c9d0044c6e0baedcc47dab4bbcc2d1 415 Pfam PF04403 Paraquat-inducible protein A 248 404 7.6E-48 T 12-10-2018 IPR007498 Intermembrane transport protein PqiA-like Vc3S01_A0370 008217894bd33a84f4daf62d742effae 556 Pfam PF01514 Secretory protein of YscJ/FliF family 25 216 4.8E-64 T 12-10-2018 IPR006182 Secretory protein YscJ/FliF Vc3S01_A0370 008217894bd33a84f4daf62d742effae 556 PRINTS PR01009 Flagellar M-ring protein signature 192 210 7.9E-26 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Vc3S01_A0370 008217894bd33a84f4daf62d742effae 556 PRINTS PR01009 Flagellar M-ring protein signature 116 134 7.9E-26 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Vc3S01_A0370 008217894bd33a84f4daf62d742effae 556 PRINTS PR01009 Flagellar M-ring protein signature 334 358 7.9E-26 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Vc3S01_A0370 008217894bd33a84f4daf62d742effae 556 PRINTS PR01009 Flagellar M-ring protein signature 148 162 7.9E-26 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Vc3S01_A0370 008217894bd33a84f4daf62d742effae 556 PRINTS PR01009 Flagellar M-ring protein signature 263 281 7.9E-26 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Vc3S01_A0370 008217894bd33a84f4daf62d742effae 556 Gene3D G3DSA:3.30.300.30 114 216 1.8E-12 T 12-10-2018 Vc3S01_A0370 008217894bd33a84f4daf62d742effae 556 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 8 545 7.0E-70 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Vc3S01_A0370 008217894bd33a84f4daf62d742effae 556 Pfam PF08345 Flagellar M-ring protein C-terminal 250 404 4.6E-37 T 12-10-2018 IPR013556 Flagellar M-ring C-terminal Vc3S01_A0370 008217894bd33a84f4daf62d742effae 556 PIRSF PIRSF004862 1 547 5.0E-126 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Vc3S01_2989 3110c2b21efb389dd98936d041a3b1e5 224 Pfam PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF 23 218 1.4E-55 T 12-10-2018 IPR021308 Group 4 capsule polysaccharide formation lipoprotein GfcB Vc3S01_2989 3110c2b21efb389dd98936d041a3b1e5 224 SUPERFAMILY SSF159270 27 222 1.44E-53 T 12-10-2018 IPR023373 YmcC-like superfamily Vc3S01_2989 3110c2b21efb389dd98936d041a3b1e5 224 Gene3D G3DSA:2.40.360.10 25 224 2.2E-57 T 12-10-2018 IPR023373 YmcC-like superfamily Vc3S01_0955 a03ec913085aa7206857a9889feb38cf 616 Pfam PF01343 Peptidase family S49 391 541 1.5E-45 T 12-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 Vc3S01_0955 a03ec913085aa7206857a9889feb38cf 616 Pfam PF01343 Peptidase family S49 138 294 4.7E-32 T 12-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 Vc3S01_0955 a03ec913085aa7206857a9889feb38cf 616 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 16 608 2.9E-196 T 12-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 Vc3S01_0955 a03ec913085aa7206857a9889feb38cf 616 Gene3D G3DSA:3.90.226.10 94 314 9.9E-163 T 12-10-2018 Vc3S01_0955 a03ec913085aa7206857a9889feb38cf 616 SUPERFAMILY SSF52096 317 529 4.52E-41 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Vc3S01_0955 a03ec913085aa7206857a9889feb38cf 616 PIRSF PIRSF001217 8 616 2.4E-230 T 12-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 Vc3S01_0955 a03ec913085aa7206857a9889feb38cf 616 Gene3D G3DSA:3.90.226.10 315 539 9.9E-163 T 12-10-2018 Vc3S01_0955 a03ec913085aa7206857a9889feb38cf 616 SUPERFAMILY SSF52096 43 284 4.69E-30 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Vc3S01_0955 a03ec913085aa7206857a9889feb38cf 616 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 327 539 2.1E-51 T 12-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 Vc3S01_0955 a03ec913085aa7206857a9889feb38cf 616 Gene3D G3DSA:3.40.1750.10 186 497 9.9E-163 T 12-10-2018 Vc3S01_0981 b58e1c5d0ce68fe45b94baa02bf655d5 340 Gene3D G3DSA:1.10.443.10 169 339 2.2E-35 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Vc3S01_0981 b58e1c5d0ce68fe45b94baa02bf655d5 340 Pfam PF00589 Phage integrase family 174 321 2.5E-16 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Vc3S01_0981 b58e1c5d0ce68fe45b94baa02bf655d5 340 SUPERFAMILY SSF56349 65 329 6.83E-38 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Vc3S01_A0057 c1c06fc7783bf755ee113f752b1f46d9 329 Gene3D G3DSA:3.40.50.1980 24 145 8.5E-21 T 12-10-2018 Vc3S01_A0057 c1c06fc7783bf755ee113f752b1f46d9 329 SUPERFAMILY SSF53807 44 322 1.53E-45 T 12-10-2018 Vc3S01_A0057 c1c06fc7783bf755ee113f752b1f46d9 329 Gene3D G3DSA:3.40.50.1980 150 323 9.0E-49 T 12-10-2018 Vc3S01_A0057 c1c06fc7783bf755ee113f752b1f46d9 329 Pfam PF01497 Periplasmic binding protein 54 298 5.9E-22 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain Vc3S01_0920 e2d6ee64010bee393a40cd0015f0c593 291 SUPERFAMILY SSF53850 89 287 1.9E-38 T 12-10-2018 Vc3S01_0920 e2d6ee64010bee393a40cd0015f0c593 291 SUPERFAMILY SSF46785 1 83 8.74E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_0920 e2d6ee64010bee393a40cd0015f0c593 291 Gene3D G3DSA:3.40.190.290 90 290 1.5E-71 T 12-10-2018 Vc3S01_0920 e2d6ee64010bee393a40cd0015f0c593 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 5.1E-13 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_0920 e2d6ee64010bee393a40cd0015f0c593 291 Gene3D G3DSA:1.10.10.10 1 89 1.1E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_0920 e2d6ee64010bee393a40cd0015f0c593 291 Pfam PF03466 LysR substrate binding domain 88 286 1.8E-39 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_p10010 70848226826ffd492bf74af680f7bcf0 777 Pfam PF13476 AAA domain 7 236 1.9E-16 T 12-10-2018 IPR038729 Rad50/SbcC-type AAA domain Vc3S01_p10010 70848226826ffd492bf74af680f7bcf0 777 SUPERFAMILY SSF52540 4 753 1.09E-22 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_p10010 70848226826ffd492bf74af680f7bcf0 777 Gene3D G3DSA:3.40.50.300 535 760 3.3E-15 T 12-10-2018 Vc3S01_p10010 70848226826ffd492bf74af680f7bcf0 777 Gene3D G3DSA:3.40.50.300 3 252 5.5E-20 T 12-10-2018 Vc3S01_p30050 8c95423c08e1cb231aa658043f6d71d2 144 Pfam PF08463 EcoEI R protein C-terminal 1 142 2.8E-39 T 12-10-2018 IPR013670 EcoEI R protein C-terminal domain GO:0003677|GO:0003824|GO:0006304 Vc3S01_0420 df481c260d25ab93a1a465c96452776d 323 Gene3D G3DSA:3.10.580.10 196 320 3.5E-44 T 12-10-2018 Vc3S01_0420 df481c260d25ab93a1a465c96452776d 323 PIRSF PIRSF004692 1 323 1.2E-131 T 12-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 Vc3S01_0420 df481c260d25ab93a1a465c96452776d 323 Gene3D G3DSA:3.40.50.10490 5 195 2.4E-64 T 12-10-2018 Vc3S01_0420 df481c260d25ab93a1a465c96452776d 323 SUPERFAMILY SSF53697 11 318 6.9E-69 T 12-10-2018 Vc3S01_0420 df481c260d25ab93a1a465c96452776d 323 Pfam PF01380 SIS domain 41 172 2.0E-31 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Vc3S01_0420 df481c260d25ab93a1a465c96452776d 323 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 45 313 3.6E-113 T 12-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 Vc3S01_0420 df481c260d25ab93a1a465c96452776d 323 Pfam PF00571 CBS domain 268 320 7.2E-7 T 12-10-2018 IPR000644 CBS domain Vc3S01_0420 df481c260d25ab93a1a465c96452776d 323 Pfam PF00571 CBS domain 211 258 1.3E-4 T 12-10-2018 IPR000644 CBS domain Vc3S01_0420 df481c260d25ab93a1a465c96452776d 323 SMART SM00116 210 258 0.72 T 12-10-2018 IPR000644 CBS domain Vc3S01_0420 df481c260d25ab93a1a465c96452776d 323 SMART SM00116 275 322 0.75 T 12-10-2018 IPR000644 CBS domain Vc3S01_2078 9384c71d9dfbe51e16318b863b2b363f 88 Gene3D G3DSA:1.20.120.910 1 73 3.6E-23 T 12-10-2018 Vc3S01_2078 9384c71d9dfbe51e16318b863b2b363f 88 SUPERFAMILY SSF57716 38 71 5.27E-7 T 12-10-2018 Vc3S01_2078 9384c71d9dfbe51e16318b863b2b363f 88 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 36 68 8.9E-13 T 12-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 Vc3S01_1650 e2c22aa9194f21bcffcac51a82834fd5 576 SUPERFAMILY SSF52172 456 574 1.11E-36 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_1650 e2c22aa9194f21bcffcac51a82834fd5 576 Pfam PF00072 Response regulator receiver domain 459 570 2.2E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_1650 e2c22aa9194f21bcffcac51a82834fd5 576 Pfam PF00512 His Kinase A (phospho-acceptor) domain 214 279 1.7E-19 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_1650 e2c22aa9194f21bcffcac51a82834fd5 576 Gene3D G3DSA:1.10.287.130 180 277 1.3E-27 T 12-10-2018 Vc3S01_1650 e2c22aa9194f21bcffcac51a82834fd5 576 SUPERFAMILY SSF55874 268 440 3.01E-44 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_1650 e2c22aa9194f21bcffcac51a82834fd5 576 SUPERFAMILY SSF47384 200 280 9.02E-22 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Vc3S01_1650 e2c22aa9194f21bcffcac51a82834fd5 576 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 434 5.2E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_1650 e2c22aa9194f21bcffcac51a82834fd5 576 PRINTS PR00344 Bacterial sensor protein C-terminal signature 362 376 5.2E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_1650 e2c22aa9194f21bcffcac51a82834fd5 576 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 390 5.2E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_1650 e2c22aa9194f21bcffcac51a82834fd5 576 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 415 5.2E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Vc3S01_1650 e2c22aa9194f21bcffcac51a82834fd5 576 Gene3D G3DSA:3.30.565.10 278 442 1.4E-43 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_1650 e2c22aa9194f21bcffcac51a82834fd5 576 SMART SM00387 326 437 1.3E-30 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_1650 e2c22aa9194f21bcffcac51a82834fd5 576 Gene3D G3DSA:3.40.50.12740 455 575 5.7E-39 T 12-10-2018 Vc3S01_1650 e2c22aa9194f21bcffcac51a82834fd5 576 SMART SM00448 456 569 1.2E-36 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_1650 e2c22aa9194f21bcffcac51a82834fd5 576 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 327 435 2.8E-27 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_1650 e2c22aa9194f21bcffcac51a82834fd5 576 SMART SM00388 214 279 1.3E-22 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_1905 b83de378665ded031b43e2b89f6bc636 153 Gene3D G3DSA:1.20.120.1630 3 153 2.6E-25 T 12-10-2018 Vc3S01_1905 b83de378665ded031b43e2b89f6bc636 153 ProDom PD049902 METHYLTRANSFERASE TRANSFERASE PRECURSOR ISOPRENYLCYSTEINE SIGNAL CARBOXYL TRANSMEMBRANE MEMBRANE FAMILY XCC3183 109 153 5.0E-17 T 12-10-2018 Vc3S01_1905 b83de378665ded031b43e2b89f6bc636 153 Pfam PF04191 Phospholipid methyltransferase 41 142 1.4E-14 T 12-10-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 Vc3S01_0280 8468bc38442c789d9786088be91741c1 598 Hamap MF_01412 Glutathione-regulated potassium-efflux system protein KefB [kefB]. 3 598 47.748 T 12-10-2018 IPR020884 Glutathione-regulated potassium-efflux system protein KefB GO:0005886|GO:0006813|GO:0015503 Vc3S01_0280 8468bc38442c789d9786088be91741c1 598 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 16 283 5.4E-81 T 12-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 Vc3S01_0280 8468bc38442c789d9786088be91741c1 598 PRINTS PR00335 TrkA potassium uptake protein signature 401 415 5.2E-7 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Vc3S01_0280 8468bc38442c789d9786088be91741c1 598 PRINTS PR00335 TrkA potassium uptake protein signature 418 432 5.2E-7 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Vc3S01_0280 8468bc38442c789d9786088be91741c1 598 PRINTS PR00335 TrkA potassium uptake protein signature 458 468 5.2E-7 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Vc3S01_0280 8468bc38442c789d9786088be91741c1 598 PRINTS PR00335 TrkA potassium uptake protein signature 447 457 5.2E-7 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Vc3S01_0280 8468bc38442c789d9786088be91741c1 598 Gene3D G3DSA:1.20.1530.20 4 384 2.5E-81 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily Vc3S01_0280 8468bc38442c789d9786088be91741c1 598 Gene3D G3DSA:3.40.50.720 399 559 3.0E-36 T 12-10-2018 Vc3S01_0280 8468bc38442c789d9786088be91741c1 598 Pfam PF02254 TrkA-N domain 402 512 5.0E-23 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Vc3S01_0280 8468bc38442c789d9786088be91741c1 598 Pfam PF00999 Sodium/hydrogen exchanger family 13 372 2.4E-68 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 Vc3S01_0280 8468bc38442c789d9786088be91741c1 598 SUPERFAMILY SSF51735 401 529 1.44E-30 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_0285 d2415ea40ef245a1bfcbf468d1c72765 75 Pfam PF04102 SlyX 9 75 9.1E-24 T 12-10-2018 IPR007236 SlyX Vc3S01_0285 d2415ea40ef245a1bfcbf468d1c72765 75 Hamap MF_00715 Protein SlyX [slyX]. 8 75 17.417 T 12-10-2018 IPR007236 SlyX Vc3S01_0285 d2415ea40ef245a1bfcbf468d1c72765 75 Gene3D G3DSA:1.20.5.300 2 51 5.5E-7 T 12-10-2018 Vc3S01_A0438 29c636dc1a30dab414e0574b7aac26ea 376 SUPERFAMILY SSF111369 62 115 7.45E-7 T 12-10-2018 Vc3S01_A0438 29c636dc1a30dab414e0574b7aac26ea 376 Gene3D G3DSA:2.40.50.100 62 256 8.5E-35 T 12-10-2018 Vc3S01_A0438 29c636dc1a30dab414e0574b7aac26ea 376 Gene3D G3DSA:1.10.287.470 96 219 8.5E-35 T 12-10-2018 Vc3S01_A0438 29c636dc1a30dab414e0574b7aac26ea 376 Gene3D G3DSA:2.40.30.170 257 342 8.5E-35 T 12-10-2018 Vc3S01_A0438 29c636dc1a30dab414e0574b7aac26ea 376 Pfam PF13533 Biotin-lipoyl like 65 111 7.7E-8 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain Vc3S01_0171 a2c1bce1a1440ecafbed0f8ea9563c11 307 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 99 272 3.2E-48 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 Vc3S01_0171 a2c1bce1a1440ecafbed0f8ea9563c11 307 Gene3D G3DSA:3.40.50.720 33 299 6.6E-95 T 12-10-2018 Vc3S01_0171 a2c1bce1a1440ecafbed0f8ea9563c11 307 Gene3D G3DSA:3.40.50.720 91 276 6.6E-95 T 12-10-2018 Vc3S01_0171 a2c1bce1a1440ecafbed0f8ea9563c11 307 SUPERFAMILY SSF52283 25 120 4.02E-7 T 12-10-2018 Vc3S01_0171 a2c1bce1a1440ecafbed0f8ea9563c11 307 SUPERFAMILY SSF51735 93 273 4.62E-47 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_0966 f5f168a3782b692907cfb04196c43463 602 Pfam PF00884 Sulfatase 270 515 3.6E-22 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 Vc3S01_0966 f5f168a3782b692907cfb04196c43463 602 Pfam PF11893 Domain of unknown function (DUF3413) 6 250 2.2E-98 T 12-10-2018 IPR024588 Inner membrane protein YejM, N-terminal Vc3S01_0966 f5f168a3782b692907cfb04196c43463 602 SUPERFAMILY SSF53649 255 584 1.45E-50 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Vc3S01_0966 f5f168a3782b692907cfb04196c43463 602 PIRSF PIRSF004950 6 600 5.6E-249 T 12-10-2018 IPR012159 Inner membrane protein YejM Vc3S01_0966 f5f168a3782b692907cfb04196c43463 602 Gene3D G3DSA:3.40.720.10 248 527 5.3E-39 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Vc3S01_2180 e451d761c157bc24d556a241b47c1057 388 Gene3D G3DSA:3.30.1490.330 264 345 1.8E-26 T 12-10-2018 Vc3S01_2180 e451d761c157bc24d556a241b47c1057 388 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 386 5.9E-160 T 12-10-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain Vc3S01_2180 e451d761c157bc24d556a241b47c1057 388 SUPERFAMILY SSF52440 174 280 4.6E-42 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Vc3S01_2180 e451d761c157bc24d556a241b47c1057 388 SUPERFAMILY SSF56059 1 385 3.27E-86 T 12-10-2018 Vc3S01_1613 3dd2b5a2837040f199c038d90bd3275a 77 SUPERFAMILY SSF54909 13 48 2.78E-5 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel Vc3S01_1613 3dd2b5a2837040f199c038d90bd3275a 77 Gene3D G3DSA:3.30.70.100 1 67 1.6E-6 T 12-10-2018 Vc3S01_A1407 ffbc027f66e57c4450cbcae05d983427 455 Gene3D G3DSA:3.90.226.10 16 264 1.3E-58 T 12-10-2018 Vc3S01_A1407 ffbc027f66e57c4450cbcae05d983427 455 Gene3D G3DSA:2.40.50.140 383 455 8.3E-14 T 12-10-2018 Vc3S01_A1407 ffbc027f66e57c4450cbcae05d983427 455 SUPERFAMILY SSF52096 8 214 1.59E-25 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Vc3S01_A1407 ffbc027f66e57c4450cbcae05d983427 455 SUPERFAMILY SSF141322 386 449 4.97E-11 T 12-10-2018 Vc3S01_A1407 ffbc027f66e57c4450cbcae05d983427 455 Pfam PF01957 NfeD-like C-terminal, partner-binding 313 450 1.3E-35 T 12-10-2018 IPR002810 NfeD-like, C-terminal domain Vc3S01_A0268 4fe211180f632d7e3ae6205e9efd78d2 514 Gene3D G3DSA:1.10.579.10 327 447 1.7E-54 T 12-10-2018 Vc3S01_A0268 4fe211180f632d7e3ae6205e9efd78d2 514 SUPERFAMILY SSF48173 229 500 1.06E-62 T 12-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 Vc3S01_A0268 4fe211180f632d7e3ae6205e9efd78d2 514 Gene3D G3DSA:1.25.40.80 132 323 2.9E-101 T 12-10-2018 Vc3S01_A0268 4fe211180f632d7e3ae6205e9efd78d2 514 Pfam PF04244 Deoxyribodipyrimidine photo-lyase-related protein 7 224 2.2E-68 T 12-10-2018 IPR007357 Deoxyribodipyrimidine photolyase-related protein Vc3S01_A0268 4fe211180f632d7e3ae6205e9efd78d2 514 Gene3D G3DSA:3.40.50.620 8 230 2.9E-101 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Vc3S01_A0268 4fe211180f632d7e3ae6205e9efd78d2 514 Gene3D G3DSA:1.10.10.1710 448 513 2.2E-24 T 12-10-2018 Vc3S01_1754 39e4711ca803232076385596ed61343c 250 SUPERFAMILY SSF46689 7 75 7.88E-15 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_1754 39e4711ca803232076385596ed61343c 250 Gene3D G3DSA:1.10.10.10 1 79 1.1E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_1754 39e4711ca803232076385596ed61343c 250 Pfam PF01418 Helix-turn-helix domain, rpiR family 8 78 8.5E-11 T 12-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 Vc3S01_1901 8f02c7317157c5c152892af3821fd77c 257 SUPERFAMILY SSF56399 34 222 3.6E-38 T 12-10-2018 Vc3S01_1901 8f02c7317157c5c152892af3821fd77c 257 Gene3D G3DSA:3.90.176.10 22 222 2.6E-32 T 12-10-2018 Vc3S01_1901 8f02c7317157c5c152892af3821fd77c 257 Pfam PF03496 ADP-ribosyltransferase exoenzyme 50 215 2.3E-11 T 12-10-2018 IPR003540 ADP ribosyltransferase GO:0005576|GO:0009405 Vc3S01_A0191 8be3a128b8464a13169c3ec9acc68a2c 263 Gene3D G3DSA:3.40.1190.20 1 263 3.9E-90 T 12-10-2018 IPR029056 Ribokinase-like Vc3S01_A0191 8be3a128b8464a13169c3ec9acc68a2c 263 Pfam PF02110 Hydroxyethylthiazole kinase family 10 252 1.4E-71 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Vc3S01_A0191 8be3a128b8464a13169c3ec9acc68a2c 263 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 12 255 29.869 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Vc3S01_A0191 8be3a128b8464a13169c3ec9acc68a2c 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 88 105 4.8E-34 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Vc3S01_A0191 8be3a128b8464a13169c3ec9acc68a2c 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 119 133 4.8E-34 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Vc3S01_A0191 8be3a128b8464a13169c3ec9acc68a2c 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 163 180 4.8E-34 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Vc3S01_A0191 8be3a128b8464a13169c3ec9acc68a2c 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 18 25 4.8E-34 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Vc3S01_A0191 8be3a128b8464a13169c3ec9acc68a2c 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 62 70 4.8E-34 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Vc3S01_A0191 8be3a128b8464a13169c3ec9acc68a2c 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 31 52 4.8E-34 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Vc3S01_A0191 8be3a128b8464a13169c3ec9acc68a2c 263 SUPERFAMILY SSF53613 6 260 6.38E-61 T 12-10-2018 IPR029056 Ribokinase-like Vc3S01_A0191 8be3a128b8464a13169c3ec9acc68a2c 263 PIRSF PIRSF000513 4 263 3.7E-98 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Vc3S01_A1848 925799ef964c736fe380e481fd1cf510 268 SUPERFAMILY SSF56935 136 264 4.58E-5 T 12-10-2018 Vc3S01_0303 79243eb23a1612eff150e3c2c410f256 201 Pfam PF10400 Virulence activator alpha C-term 114 198 5.4E-16 T 12-10-2018 IPR018309 Transcription regulator PadR, C-terminal Vc3S01_0303 79243eb23a1612eff150e3c2c410f256 201 SUPERFAMILY SSF46785 25 198 6.04E-45 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_0303 79243eb23a1612eff150e3c2c410f256 201 Pfam PF03551 Transcriptional regulator PadR-like family 29 102 1.4E-15 T 12-10-2018 IPR005149 Transcription regulator PadR, N-terminal Vc3S01_0303 79243eb23a1612eff150e3c2c410f256 201 Gene3D G3DSA:1.10.10.10 23 111 8.5E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A1230 a1cf5c5709e5470e4931f08d5b096020 430 SUPERFAMILY SSF103088 310 426 2.88E-25 T 12-10-2018 IPR036737 OmpA-like domain superfamily Vc3S01_A1230 a1cf5c5709e5470e4931f08d5b096020 430 TIGRFAM TIGR03350 type_VI_ompA: type VI secretion system peptidoglycan-associated domain 291 426 6.0E-45 T 12-10-2018 IPR017733 Type VI secretion system peptidoglycan-associated domain Vc3S01_A1230 a1cf5c5709e5470e4931f08d5b096020 430 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 49 258 5.3E-65 T 12-10-2018 IPR017732 Type IV / VI secretion system, DotU Vc3S01_A1230 a1cf5c5709e5470e4931f08d5b096020 430 Pfam PF09850 Type VI secretion system protein DotU 50 252 1.7E-56 T 12-10-2018 IPR017732 Type IV / VI secretion system, DotU Vc3S01_A1230 a1cf5c5709e5470e4931f08d5b096020 430 Gene3D G3DSA:1.25.40.590 47 204 9.3E-49 T 12-10-2018 IPR038522 Type IV / VI secretion system, DotU superfamily Vc3S01_A1230 a1cf5c5709e5470e4931f08d5b096020 430 Pfam PF00691 OmpA family 322 420 1.7E-14 T 12-10-2018 IPR006665 OmpA-like domain Vc3S01_A1230 a1cf5c5709e5470e4931f08d5b096020 430 Gene3D G3DSA:3.30.1330.60 276 429 9.8E-40 T 12-10-2018 IPR036737 OmpA-like domain superfamily Vc3S01_0956 5d6a0bddc14c2ff54e00fd077dc3fa27 670 SUPERFAMILY SSF51395 4 364 1.2E-108 T 12-10-2018 Vc3S01_0956 5d6a0bddc14c2ff54e00fd077dc3fa27 670 Gene3D G3DSA:3.40.50.720 377 664 5.8E-108 T 12-10-2018 Vc3S01_0956 5d6a0bddc14c2ff54e00fd077dc3fa27 670 PRINTS PR00419 Adrenodoxin reductase family signature 401 414 1.4E-9 T 12-10-2018 Vc3S01_0956 5d6a0bddc14c2ff54e00fd077dc3fa27 670 PRINTS PR00419 Adrenodoxin reductase family signature 378 400 1.4E-9 T 12-10-2018 Vc3S01_0956 5d6a0bddc14c2ff54e00fd077dc3fa27 670 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 330 1.0E-83 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 Vc3S01_0956 5d6a0bddc14c2ff54e00fd077dc3fa27 670 Gene3D G3DSA:3.50.50.60 471 623 5.8E-108 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_0956 5d6a0bddc14c2ff54e00fd077dc3fa27 670 SUPERFAMILY SSF51971 376 625 2.77E-41 T 12-10-2018 Vc3S01_0956 5d6a0bddc14c2ff54e00fd077dc3fa27 670 Gene3D G3DSA:3.20.20.70 4 370 1.2E-121 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_0956 5d6a0bddc14c2ff54e00fd077dc3fa27 670 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 378 629 3.1E-24 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Vc3S01_A0096 ea966d4a9d64cef5c0780c71be4f1302 329 Gene3D G3DSA:1.10.3720.10 68 324 1.2E-63 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_A0096 ea966d4a9d64cef5c0780c71be4f1302 329 SUPERFAMILY SSF161098 72 313 6.54E-54 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_A0096 ea966d4a9d64cef5c0780c71be4f1302 329 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 310 8.3E-8 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Vc3S01_0133 c1a6ac559b84ebbda775645ce5fd5ba1 264 Gene3D G3DSA:3.40.50.150 4 246 5.8E-21 T 12-10-2018 Vc3S01_0133 c1a6ac559b84ebbda775645ce5fd5ba1 264 SUPERFAMILY SSF53335 13 246 7.81E-37 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Vc3S01_0133 c1a6ac559b84ebbda775645ce5fd5ba1 264 Pfam PF04072 Leucine carboxyl methyltransferase 64 204 8.0E-9 T 12-10-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 Vc3S01_0133 c1a6ac559b84ebbda775645ce5fd5ba1 264 PIRSF PIRSF028177 1 264 1.3E-70 T 12-10-2018 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP GO:0017000|GO:1901106 Vc3S01_A1422 3a6970540616e695ebff37b5488160e6 271 Pfam PF00652 Ricin-type beta-trefoil lectin domain 96 178 2.8E-8 T 12-10-2018 IPR000772 Ricin B, lectin domain Vc3S01_A1422 3a6970540616e695ebff37b5488160e6 271 Gene3D G3DSA:2.80.10.50 87 212 1.6E-11 T 12-10-2018 Vc3S01_A1422 3a6970540616e695ebff37b5488160e6 271 Gene3D G3DSA:2.80.10.50 16 86 8.3E-6 T 12-10-2018 Vc3S01_A1422 3a6970540616e695ebff37b5488160e6 271 SMART SM00458 33 172 1.5E-8 T 12-10-2018 IPR000772 Ricin B, lectin domain Vc3S01_A1422 3a6970540616e695ebff37b5488160e6 271 SUPERFAMILY SSF50370 38 170 7.5E-18 T 12-10-2018 IPR035992 Ricin B-like lectins Vc3S01_1938 243fdc2d21f2eaa82d2df617d07c1004 648 Gene3D G3DSA:3.30.70.270 486 645 2.7E-32 T 12-10-2018 Vc3S01_1938 243fdc2d21f2eaa82d2df617d07c1004 648 SUPERFAMILY SSF55073 492 640 7.85E-27 T 12-10-2018 IPR029787 Nucleotide cyclase Vc3S01_1938 243fdc2d21f2eaa82d2df617d07c1004 648 SMART SM00267 476 647 2.8E-23 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_1938 243fdc2d21f2eaa82d2df617d07c1004 648 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 483 640 5.0E-27 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_1938 243fdc2d21f2eaa82d2df617d07c1004 648 Pfam PF00990 Diguanylate cyclase, GGDEF domain 488 640 2.8E-27 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_2271 54b19675ca8c9f1f253ae4e76746d633 182 Gene3D G3DSA:3.40.630.30 1 178 7.5E-46 T 12-10-2018 Vc3S01_2271 54b19675ca8c9f1f253ae4e76746d633 182 Pfam PF13302 Acetyltransferase (GNAT) domain 11 152 7.2E-23 T 12-10-2018 IPR000182 GNAT domain Vc3S01_2271 54b19675ca8c9f1f253ae4e76746d633 182 SUPERFAMILY SSF55729 3 177 6.13E-43 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_2551 31ec88052fbc8b5e44c502409f9ad544 239 ProSitePatterns PS01070 DNA/RNA non-specific endonucleases active site. 100 108 - T 12-10-2018 IPR018524 DNA/RNA non-specific endonuclease, active site GO:0003676|GO:0016787|GO:0046872 Vc3S01_2551 31ec88052fbc8b5e44c502409f9ad544 239 SUPERFAMILY SSF54060 23 226 2.24E-67 T 12-10-2018 Vc3S01_2551 31ec88052fbc8b5e44c502409f9ad544 239 Pfam PF01223 DNA/RNA non-specific endonuclease 24 226 3.9E-56 T 12-10-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 Vc3S01_2551 31ec88052fbc8b5e44c502409f9ad544 239 SMART SM00892 40 230 1.2E-61 T 12-10-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 Vc3S01_2551 31ec88052fbc8b5e44c502409f9ad544 239 SMART SM00477 41 232 8.2E-63 T 12-10-2018 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 Vc3S01_2551 31ec88052fbc8b5e44c502409f9ad544 239 Gene3D G3DSA:3.40.570.10 11 237 7.7E-73 T 12-10-2018 Vc3S01_A1680 77e436ed499aa147741743f8fe5c263b 408 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 8 407 23.406 T 12-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 Vc3S01_A1680 77e436ed499aa147741743f8fe5c263b 408 Pfam PF03616 Sodium/glutamate symporter 12 376 9.0E-115 T 12-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 Vc3S01_A1680 77e436ed499aa147741743f8fe5c263b 408 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 15 405 2.2E-131 T 12-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 Vc3S01_3061 07e566b66e3b41203f8dc4e530296049 675 Gene3D G3DSA:3.30.1370.120 263 342 1.8E-17 T 12-10-2018 IPR038591 NolW-like superfamily Vc3S01_3061 07e566b66e3b41203f8dc4e530296049 675 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 556 589 - T 12-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 Vc3S01_3061 07e566b66e3b41203f8dc4e530296049 675 Gene3D G3DSA:3.30.1370.120 188 258 6.0E-21 T 12-10-2018 IPR038591 NolW-like superfamily Vc3S01_3061 07e566b66e3b41203f8dc4e530296049 675 Pfam PF03958 Bacterial type II/III secretion system short domain 125 186 7.5E-9 T 12-10-2018 IPR005644 NolW-like Vc3S01_3061 07e566b66e3b41203f8dc4e530296049 675 Pfam PF03958 Bacterial type II/III secretion system short domain 266 344 2.0E-18 T 12-10-2018 IPR005644 NolW-like Vc3S01_3061 07e566b66e3b41203f8dc4e530296049 675 Pfam PF03958 Bacterial type II/III secretion system short domain 191 258 2.9E-16 T 12-10-2018 IPR005644 NolW-like Vc3S01_3061 07e566b66e3b41203f8dc4e530296049 675 Gene3D G3DSA:3.30.1370.120 21 185 4.3E-52 T 12-10-2018 IPR038591 NolW-like superfamily Vc3S01_3061 07e566b66e3b41203f8dc4e530296049 675 PRINTS PR00811 Bacterial general secretion pathway protein D signature 480 490 3.8E-38 T 12-10-2018 IPR001775 GspD/PilQ family Vc3S01_3061 07e566b66e3b41203f8dc4e530296049 675 PRINTS PR00811 Bacterial general secretion pathway protein D signature 344 354 3.8E-38 T 12-10-2018 IPR001775 GspD/PilQ family Vc3S01_3061 07e566b66e3b41203f8dc4e530296049 675 PRINTS PR00811 Bacterial general secretion pathway protein D signature 445 469 3.8E-38 T 12-10-2018 IPR001775 GspD/PilQ family Vc3S01_3061 07e566b66e3b41203f8dc4e530296049 675 PRINTS PR00811 Bacterial general secretion pathway protein D signature 598 612 3.8E-38 T 12-10-2018 IPR001775 GspD/PilQ family Vc3S01_3061 07e566b66e3b41203f8dc4e530296049 675 PRINTS PR00811 Bacterial general secretion pathway protein D signature 575 593 3.8E-38 T 12-10-2018 IPR001775 GspD/PilQ family Vc3S01_3061 07e566b66e3b41203f8dc4e530296049 675 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 30 620 9.1E-160 T 12-10-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 Vc3S01_3061 07e566b66e3b41203f8dc4e530296049 675 PRINTS PR01032 Gene IV protein signature 538 566 3.2E-13 T 12-10-2018 Vc3S01_3061 07e566b66e3b41203f8dc4e530296049 675 PRINTS PR01032 Gene IV protein signature 591 613 3.2E-13 T 12-10-2018 Vc3S01_3061 07e566b66e3b41203f8dc4e530296049 675 PRINTS PR01032 Gene IV protein signature 470 493 3.2E-13 T 12-10-2018 Vc3S01_3061 07e566b66e3b41203f8dc4e530296049 675 Pfam PF00263 Bacterial type II and III secretion system protein 449 611 1.2E-50 T 12-10-2018 IPR004846 Type II/III secretion system GO:0009306 Vc3S01_A1165 05f9a83e085f0c1802c4b9dbc1a9e9b7 461 TIGRFAM TIGR00797 matE: MATE efflux family protein 28 425 2.3E-53 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Vc3S01_A1165 05f9a83e085f0c1802c4b9dbc1a9e9b7 461 PIRSF PIRSF006603 5 460 1.2E-61 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Vc3S01_A1165 05f9a83e085f0c1802c4b9dbc1a9e9b7 461 Pfam PF01554 MatE 252 414 5.7E-17 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Vc3S01_A1165 05f9a83e085f0c1802c4b9dbc1a9e9b7 461 Pfam PF01554 MatE 28 188 8.7E-26 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Vc3S01_A1389 92813def24f7b4b8cdbca7415d76aae9 97 Gene3D G3DSA:3.90.79.10 1 84 5.3E-9 T 12-10-2018 Vc3S01_A1389 92813def24f7b4b8cdbca7415d76aae9 97 SUPERFAMILY SSF55811 1 67 3.38E-9 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Vc3S01_A0382 69d389ce5b4c11f12641e2b3b47a1f04 450 Pfam PF00419 Fimbrial protein 263 450 5.9E-22 T 12-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 Vc3S01_A0382 69d389ce5b4c11f12641e2b3b47a1f04 450 PIRSF PIRSF029766 4 450 3.7E-110 T 12-10-2018 IPR011228 Uncharacterised conserved protein UCP029766 Vc3S01_A0382 69d389ce5b4c11f12641e2b3b47a1f04 450 SUPERFAMILY SSF49401 270 450 2.04E-9 T 12-10-2018 IPR008966 Adhesion domain superfamily Vc3S01_A0382 69d389ce5b4c11f12641e2b3b47a1f04 450 Gene3D G3DSA:2.60.40.1090 261 449 1.7E-8 T 12-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 Vc3S01_A2048 a19401f514a2674aedc15ffcb5fd0a36 283 Gene3D G3DSA:1.10.10.10 1 76 8.1E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A2048 a19401f514a2674aedc15ffcb5fd0a36 283 SUPERFAMILY SSF46689 2 77 3.76E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_A2048 a19401f514a2674aedc15ffcb5fd0a36 283 Pfam PF01418 Helix-turn-helix domain, rpiR family 3 74 6.2E-19 T 12-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 Vc3S01_A2048 a19401f514a2674aedc15ffcb5fd0a36 283 Pfam PF01380 SIS domain 129 257 2.1E-17 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Vc3S01_A2048 a19401f514a2674aedc15ffcb5fd0a36 283 Gene3D G3DSA:3.40.50.10490 97 278 2.3E-39 T 12-10-2018 Vc3S01_A2048 a19401f514a2674aedc15ffcb5fd0a36 283 SUPERFAMILY SSF53697 104 277 9.82E-38 T 12-10-2018 Vc3S01_0282 6e32289e7b9e7b67a2759175a0ed7abd 191 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 136 8.0E-12 T 12-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain Vc3S01_0282 6e32289e7b9e7b67a2759175a0ed7abd 191 Gene3D G3DSA:3.10.50.40 3 154 2.2E-58 T 12-10-2018 Vc3S01_0282 6e32289e7b9e7b67a2759175a0ed7abd 191 Gene3D G3DSA:2.40.10.330 71 121 2.2E-58 T 12-10-2018 Vc3S01_0282 6e32289e7b9e7b67a2759175a0ed7abd 191 SUPERFAMILY SSF54534 2 139 1.0E-34 T 12-10-2018 Vc3S01_A1898 ba53c1733f9a878b2d5fd6e09e40e9c1 540 Gene3D G3DSA:3.20.20.80 51 453 6.3E-72 T 12-10-2018 Vc3S01_A1898 ba53c1733f9a878b2d5fd6e09e40e9c1 540 Gene3D G3DSA:2.60.40.1180 454 539 7.2E-7 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta Vc3S01_A1898 ba53c1733f9a878b2d5fd6e09e40e9c1 540 SMART SM00642 61 447 3.3E-34 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Vc3S01_A1898 ba53c1733f9a878b2d5fd6e09e40e9c1 540 SUPERFAMILY SSF51011 456 535 7.84E-7 T 12-10-2018 Vc3S01_A1898 ba53c1733f9a878b2d5fd6e09e40e9c1 540 SUPERFAMILY SSF51445 55 457 5.85E-70 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily Vc3S01_A1898 ba53c1733f9a878b2d5fd6e09e40e9c1 540 Pfam PF00128 Alpha amylase, catalytic domain 205 390 1.5E-14 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Vc3S01_A1898 ba53c1733f9a878b2d5fd6e09e40e9c1 540 Pfam PF00128 Alpha amylase, catalytic domain 87 174 1.1E-26 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Vc3S01_A0154 cae15aff7826e83f5f8ac8e268b99951 83 Pfam PF10985 Protein of unknown function (DUF2805) 9 79 2.3E-36 T 12-10-2018 IPR019882 Conserved hypothetical protein CHP03643 Vc3S01_A0154 cae15aff7826e83f5f8ac8e268b99951 83 TIGRFAM TIGR03643 TIGR03643: TIGR03643 family protein 8 77 1.2E-36 T 12-10-2018 IPR019882 Conserved hypothetical protein CHP03643 Vc3S01_0707 ab509ebbd0f00cad1b7431445b8bc6e7 153 Pfam PF11873 Domain of unknown function (DUF3393) 35 143 7.6E-35 T 12-10-2018 IPR024570 Murein transglycosylase-C, N-terminal Vc3S01_2285 f6b805bdbd29405415b5d396f1b93b87 539 Gene3D G3DSA:3.30.70.2700 1 81 1.7E-33 T 12-10-2018 Vc3S01_2285 f6b805bdbd29405415b5d396f1b93b87 539 PIRSF PIRSF038984 1 536 6.0E-240 T 12-10-2018 IPR028348 FAD dependent protein Vc3S01_2285 f6b805bdbd29405415b5d396f1b93b87 539 SUPERFAMILY SSF51905 101 531 1.76E-36 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_2285 f6b805bdbd29405415b5d396f1b93b87 539 Gene3D G3DSA:3.50.50.60 86 305 2.0E-91 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_2285 f6b805bdbd29405415b5d396f1b93b87 539 Gene3D G3DSA:3.50.50.60 471 534 2.3E-15 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_A0543 f635dfa3b8ea497f214df1fdbc627f41 305 Gene3D G3DSA:3.40.630.10 4 305 1.2E-116 T 12-10-2018 Vc3S01_A0543 f635dfa3b8ea497f214df1fdbc627f41 305 SUPERFAMILY SSF53187 36 289 1.95E-39 T 12-10-2018 Vc3S01_A0543 f635dfa3b8ea497f214df1fdbc627f41 305 Pfam PF00246 Zinc carboxypeptidase 74 146 2.0E-7 T 12-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 Vc3S01_A0341 e4438654bc498673358fb20656609d25 125 Gene3D G3DSA:2.30.29.50 3 125 7.6E-39 T 12-10-2018 IPR037063 Bacterial Pleckstrin homology domain superfamily Vc3S01_A0341 e4438654bc498673358fb20656609d25 125 SUPERFAMILY SSF50729 10 124 4.92E-39 T 12-10-2018 Vc3S01_A0341 e4438654bc498673358fb20656609d25 125 Pfam PF08000 Bacterial PH domain 5 123 4.7E-40 T 12-10-2018 IPR012544 Bacterial Pleckstrin homology domain Vc3S01_1680 e248d6614dbb88f8c7a56ab0351d9254 210 Pfam PF02613 Nitrate reductase delta subunit 45 159 4.5E-30 T 12-10-2018 IPR020945 DMSO/Nitrate reductase chaperone Vc3S01_1680 e248d6614dbb88f8c7a56ab0351d9254 210 Gene3D G3DSA:1.10.3480.10 3 197 1.6E-41 T 12-10-2018 Vc3S01_1680 e248d6614dbb88f8c7a56ab0351d9254 210 SUPERFAMILY SSF89155 7 191 1.01E-53 T 12-10-2018 IPR036411 TorD-like superfamily Vc3S01_2001 a34e7d787bf5c1e0dc0ae1997f87b73a 553 PIRSF PIRSF000076 1 553 3.2E-242 T 12-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 Vc3S01_2001 a34e7d787bf5c1e0dc0ae1997f87b73a 553 SUPERFAMILY SSF56821 1 551 6.8E-193 T 12-10-2018 IPR011254 Prismane-like superfamily GO:0003824|GO:0016491|GO:0055114 Vc3S01_2001 a34e7d787bf5c1e0dc0ae1997f87b73a 553 Gene3D G3DSA:3.40.50.2030 237 382 6.9E-63 T 12-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 Vc3S01_2001 a34e7d787bf5c1e0dc0ae1997f87b73a 553 Gene3D G3DSA:1.20.1270.20 1 144 2.4E-37 T 12-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 Vc3S01_2001 a34e7d787bf5c1e0dc0ae1997f87b73a 553 Gene3D G3DSA:3.40.50.2030 383 551 1.7E-60 T 12-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 Vc3S01_2001 a34e7d787bf5c1e0dc0ae1997f87b73a 553 Gene3D G3DSA:1.20.1270.20 153 235 2.8E-28 T 12-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 Vc3S01_2001 a34e7d787bf5c1e0dc0ae1997f87b73a 553 Pfam PF03063 Prismane/CO dehydrogenase family 1 548 2.9E-162 T 12-10-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 Vc3S01_2001 a34e7d787bf5c1e0dc0ae1997f87b73a 553 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 1 551 1.2E-224 T 12-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 Vc3S01_2001 a34e7d787bf5c1e0dc0ae1997f87b73a 553 Hamap MF_00069 Hydroxylamine reductase [hcp]. 1 552 20.133 T 12-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 Vc3S01_2665 cf59e80c22a33ee9cf35b39b8d0b0ec5 557 Gene3D G3DSA:1.10.3720.10 285 550 6.0E-30 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_2665 cf59e80c22a33ee9cf35b39b8d0b0ec5 557 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 288 548 4.7E-76 T 12-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 Vc3S01_2665 cf59e80c22a33ee9cf35b39b8d0b0ec5 557 SUPERFAMILY SSF161098 285 538 2.49E-35 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_2665 cf59e80c22a33ee9cf35b39b8d0b0ec5 557 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 324 476 1.5E-17 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Vc3S01_0740 64ae8a662008e11c6d3373296f3c1535 177 SUPERFAMILY SSF88659 110 172 1.1E-14 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Vc3S01_0740 64ae8a662008e11c6d3373296f3c1535 177 Pfam PF04542 Sigma-70 region 2 17 82 4.8E-17 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Vc3S01_0740 64ae8a662008e11c6d3373296f3c1535 177 SUPERFAMILY SSF88946 3 101 1.28E-24 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Vc3S01_0740 64ae8a662008e11c6d3373296f3c1535 177 Gene3D G3DSA:1.10.1740.10 1 79 1.5E-23 T 12-10-2018 Vc3S01_0740 64ae8a662008e11c6d3373296f3c1535 177 Gene3D G3DSA:1.10.10.10 91 174 3.8E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_0740 64ae8a662008e11c6d3373296f3c1535 177 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 10 171 4.7E-30 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Vc3S01_0740 64ae8a662008e11c6d3373296f3c1535 177 Pfam PF04545 Sigma-70, region 4 122 170 1.2E-13 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Vc3S01_A0315 e26bdf25a7f9663f7b573f5b3b4a5d26 93 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 1 90 2.6E-15 T 12-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 Vc3S01_A0315 e26bdf25a7f9663f7b573f5b3b4a5d26 93 Pfam PF04316 Anti-sigma-28 factor, FlgM 43 84 5.5E-6 T 12-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal Vc3S01_A0315 e26bdf25a7f9663f7b573f5b3b4a5d26 93 SUPERFAMILY SSF101498 13 89 9.29E-8 T 12-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily Vc3S01_1979 7c11a60f839bac22ccee4f58bf671305 140 Pfam PF00583 Acetyltransferase (GNAT) family 14 112 3.4E-15 T 12-10-2018 IPR000182 GNAT domain Vc3S01_1979 7c11a60f839bac22ccee4f58bf671305 140 Gene3D G3DSA:3.40.630.30 1 136 7.2E-24 T 12-10-2018 Vc3S01_1979 7c11a60f839bac22ccee4f58bf671305 140 SUPERFAMILY SSF55729 8 136 5.07E-21 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_A1612 dda810a4f5ccaa4f7cded9bd38eb3532 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 1.2E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Vc3S01_A1612 dda810a4f5ccaa4f7cded9bd38eb3532 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 1.2E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Vc3S01_A1612 dda810a4f5ccaa4f7cded9bd38eb3532 188 Gene3D G3DSA:1.10.357.10 6 175 3.7E-24 T 12-10-2018 Vc3S01_A1612 dda810a4f5ccaa4f7cded9bd38eb3532 188 Pfam PF00440 Bacterial regulatory proteins, tetR family 39 68 3.0E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Vc3S01_A1612 dda810a4f5ccaa4f7cded9bd38eb3532 188 SUPERFAMILY SSF46689 20 80 2.82E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_A1612 dda810a4f5ccaa4f7cded9bd38eb3532 188 SUPERFAMILY SSF48498 83 160 4.45E-7 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Vc3S01_0469 01514245e5a256dda400d66074a6f1b9 200 Gene3D G3DSA:3.90.950.10 1 199 9.0E-84 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Vc3S01_0469 01514245e5a256dda400d66074a6f1b9 200 Hamap MF_01405 dITP/XTP pyrophosphatase. 2 196 51.202 T 12-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 Vc3S01_0469 01514245e5a256dda400d66074a6f1b9 200 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 194 1.8E-65 T 12-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 Vc3S01_0469 01514245e5a256dda400d66074a6f1b9 200 Pfam PF01725 Ham1 family 4 191 4.4E-58 T 12-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 Vc3S01_0469 01514245e5a256dda400d66074a6f1b9 200 SUPERFAMILY SSF52972 1 195 3.4E-74 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Vc3S01_0630 369ca16570a24676a311ae7b0d9ac658 894 SUPERFAMILY SSF50447 567 648 3.95E-23 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Vc3S01_0630 369ca16570a24676a311ae7b0d9ac658 894 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 62 100 7.9E-16 T 12-10-2018 IPR013575 Initiation factor 2 associated domain, bacterial Vc3S01_0630 369ca16570a24676a311ae7b0d9ac658 894 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 397 551 2.5E-34 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Vc3S01_0630 369ca16570a24676a311ae7b0d9ac658 894 SUPERFAMILY SSF52540 392 558 4.3E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0630 369ca16570a24676a311ae7b0d9ac658 894 Gene3D G3DSA:3.40.50.300 390 564 5.9E-70 T 12-10-2018 Vc3S01_0630 369ca16570a24676a311ae7b0d9ac658 894 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 319 368 5.7E-14 T 12-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal Vc3S01_0630 369ca16570a24676a311ae7b0d9ac658 894 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 51 1.3E-7 T 12-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal Vc3S01_0630 369ca16570a24676a311ae7b0d9ac658 894 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 311 893 4.9E-285 T 12-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 Vc3S01_0630 369ca16570a24676a311ae7b0d9ac658 894 Gene3D G3DSA:2.40.30.10 795 892 1.5E-34 T 12-10-2018 Vc3S01_0630 369ca16570a24676a311ae7b0d9ac658 894 SUPERFAMILY SSF46955 3 50 2.93E-12 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily Vc3S01_0630 369ca16570a24676a311ae7b0d9ac658 894 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 891 17.605 T 12-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 Vc3S01_0630 369ca16570a24676a311ae7b0d9ac658 894 ProSitePatterns PS01176 Initiation factor 2 signature. 844 866 - T 12-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 Vc3S01_0630 369ca16570a24676a311ae7b0d9ac658 894 Pfam PF00009 Elongation factor Tu GTP binding domain 397 553 4.6E-32 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Vc3S01_0630 369ca16570a24676a311ae7b0d9ac658 894 Gene3D G3DSA:3.30.56.50 2 50 2.5E-23 T 12-10-2018 Vc3S01_0630 369ca16570a24676a311ae7b0d9ac658 894 Gene3D G3DSA:3.40.50.10050 688 794 1.9E-37 T 12-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily Vc3S01_0630 369ca16570a24676a311ae7b0d9ac658 894 Pfam PF11987 Translation-initiation factor 2 678 783 8.1E-37 T 12-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 Vc3S01_0630 369ca16570a24676a311ae7b0d9ac658 894 SUPERFAMILY SSF50447 795 891 1.24E-34 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Vc3S01_0630 369ca16570a24676a311ae7b0d9ac658 894 Gene3D G3DSA:2.40.30.10 565 683 2.1E-40 T 12-10-2018 Vc3S01_0630 369ca16570a24676a311ae7b0d9ac658 894 SUPERFAMILY SSF52156 671 800 1.7E-38 T 12-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily Vc3S01_1995 57e47218970c50910eabafcc9a53dbec 215 Pfam PF00005 ABC transporter 22 163 8.7E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_1995 57e47218970c50910eabafcc9a53dbec 215 SMART SM00382 28 214 1.8E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_1995 57e47218970c50910eabafcc9a53dbec 215 SUPERFAMILY SSF52540 10 199 6.04E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_1995 57e47218970c50910eabafcc9a53dbec 215 Gene3D G3DSA:3.40.50.300 1 205 1.9E-52 T 12-10-2018 Vc3S01_0127 113d3cde920e10620e4762ee1545cc53 280 Pfam PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease 1 87 2.6E-33 T 12-10-2018 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GO:0004252|GO:0016021 Vc3S01_0127 113d3cde920e10620e4762ee1545cc53 280 SUPERFAMILY SSF144091 96 271 5.62E-40 T 12-10-2018 Vc3S01_0127 113d3cde920e10620e4762ee1545cc53 280 Gene3D G3DSA:3.30.70.2350 1 69 2.3E-25 T 12-10-2018 IPR038236 GlpG peptidase, N-terminal domain superfamily Vc3S01_0127 113d3cde920e10620e4762ee1545cc53 280 Gene3D G3DSA:1.20.1540.10 90 279 7.4E-53 T 12-10-2018 IPR035952 Rhomboid-like superfamily Vc3S01_0127 113d3cde920e10620e4762ee1545cc53 280 TIGRFAM TIGR04239 rhombo_GlpG: rhomboid family protease GlpG 3 271 1.5E-116 T 12-10-2018 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 Vc3S01_0127 113d3cde920e10620e4762ee1545cc53 280 Pfam PF01694 Rhomboid family 134 271 6.8E-30 T 12-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 Vc3S01_2301 f8a8bd58122295cf264983716105752b 291 SUPERFAMILY SSF54427 170 290 1.14E-15 T 12-10-2018 IPR032710 NTF2-like domain superfamily Vc3S01_2301 f8a8bd58122295cf264983716105752b 291 Pfam PF04280 Tim44-like domain 169 290 8.5E-14 T 12-10-2018 IPR007379 Tim44-like domain Vc3S01_2301 f8a8bd58122295cf264983716105752b 291 Pfam PF07466 Protein of unknown function (DUF1517) 28 124 7.4E-6 T 12-10-2018 IPR010903 Protein of unknown function DUF1517 Vc3S01_2301 f8a8bd58122295cf264983716105752b 291 SMART SM00978 160 291 1.7E-36 T 12-10-2018 IPR007379 Tim44-like domain Vc3S01_1442 413dbb61148e2192f0a9beb7e63dc39a 437 Pfam PF06629 MltA-interacting protein MipA 45 240 1.4E-23 T 12-10-2018 IPR010583 MltA-interacting MipA Vc3S01_A0688 b650934dcf43a498d720df0300747efb 259 Pfam PF04233 Phage Mu protein F like protein 50 179 2.2E-16 T 12-10-2018 IPR006528 Phage head morphogenesis domain Vc3S01_0550 b42e973034ad51b8e09ffdce66cf9075 424 Gene3D G3DSA:3.30.465.10 339 418 1.3E-26 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Vc3S01_0550 b42e973034ad51b8e09ffdce66cf9075 424 SUPERFAMILY SSF56176 339 419 1.36E-20 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Vc3S01_0550 b42e973034ad51b8e09ffdce66cf9075 424 Pfam PF01595 Domain of unknown function DUF21 13 181 2.1E-49 T 12-10-2018 IPR002550 CNNM, transmembrane domain Vc3S01_0550 b42e973034ad51b8e09ffdce66cf9075 424 Gene3D G3DSA:3.10.580.10 201 330 3.5E-42 T 12-10-2018 Vc3S01_0550 b42e973034ad51b8e09ffdce66cf9075 424 Pfam PF03471 Transporter associated domain 344 418 1.6E-16 T 12-10-2018 IPR005170 Transporter-associated domain Vc3S01_0550 b42e973034ad51b8e09ffdce66cf9075 424 SMART SM01091 342 420 3.5E-23 T 12-10-2018 IPR005170 Transporter-associated domain Vc3S01_0550 b42e973034ad51b8e09ffdce66cf9075 424 Pfam PF00571 CBS domain 278 326 3.6E-4 T 12-10-2018 IPR000644 CBS domain Vc3S01_0550 b42e973034ad51b8e09ffdce66cf9075 424 SUPERFAMILY SSF54631 192 329 2.65E-24 T 12-10-2018 Vc3S01_A1885 3936ce704b5dbad86e83d767234e9296 295 Pfam PF07582 AP endonuclease family 2 C terminus 251 272 1.2E-4 T 12-10-2018 IPR011418 AP endonuclease, family 2, C-terminal Vc3S01_A1885 3936ce704b5dbad86e83d767234e9296 295 Gene3D G3DSA:3.20.20.150 3 294 1.9E-60 T 12-10-2018 Vc3S01_A1885 3936ce704b5dbad86e83d767234e9296 295 Pfam PF01261 Xylose isomerase-like TIM barrel 33 247 4.9E-27 T 12-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain Vc3S01_A1885 3936ce704b5dbad86e83d767234e9296 295 SUPERFAMILY SSF51658 3 292 1.52E-46 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily Vc3S01_3016 e8617b65ee2b989d3aaafeffde6876f1 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 1.6E-23 T 12-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Vc3S01_3016 e8617b65ee2b989d3aaafeffde6876f1 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 12-10-2018 IPR018336 Ribonuclease PH, conserved site Vc3S01_3016 e8617b65ee2b989d3aaafeffde6876f1 238 Gene3D G3DSA:3.30.230.70 13 238 4.4E-63 T 12-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Vc3S01_3016 e8617b65ee2b989d3aaafeffde6876f1 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 6.5E-111 T 12-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 Vc3S01_3016 e8617b65ee2b989d3aaafeffde6876f1 238 Hamap MF_00564 Ribonuclease PH [rph]. 11 237 43.75 T 12-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 Vc3S01_3016 e8617b65ee2b989d3aaafeffde6876f1 238 Pfam PF03725 3' exoribonuclease family, domain 2 159 222 3.0E-10 T 12-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Vc3S01_3016 e8617b65ee2b989d3aaafeffde6876f1 238 SUPERFAMILY SSF55666 153 236 5.5E-25 T 12-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Vc3S01_3016 e8617b65ee2b989d3aaafeffde6876f1 238 SUPERFAMILY SSF54211 1 181 7.09E-45 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Vc3S01_A0767 0ab62f5144059472e8d2cedca63194fe 666 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 478 628 1.6E-42 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Vc3S01_A0767 0ab62f5144059472e8d2cedca63194fe 666 Pfam PF12729 Four helix bundle sensory module for signal transduction 2 162 1.1E-13 T 12-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain Vc3S01_A0767 0ab62f5144059472e8d2cedca63194fe 666 Gene3D G3DSA:1.10.287.950 335 666 1.4E-65 T 12-10-2018 Vc3S01_A0767 0ab62f5144059472e8d2cedca63194fe 666 SUPERFAMILY SSF58104 361 665 5.1E-66 T 12-10-2018 Vc3S01_A0767 0ab62f5144059472e8d2cedca63194fe 666 Pfam PF00672 HAMP domain 337 379 7.7E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Vc3S01_A0767 0ab62f5144059472e8d2cedca63194fe 666 SMART SM00283 403 664 1.2E-61 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Vc3S01_A0767 0ab62f5144059472e8d2cedca63194fe 666 SMART SM00304 335 388 1.6E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Vc3S01_2231 3c307c519ab1deb19a5dfc61d73b1ac1 233 SUPERFAMILY SSF55729 81 232 1.54E-22 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_2231 3c307c519ab1deb19a5dfc61d73b1ac1 233 PIRSF PIRSF037208 1 233 3.7E-85 T 12-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 Vc3S01_2231 3c307c519ab1deb19a5dfc61d73b1ac1 233 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 107 226 1.3E-31 T 12-10-2018 IPR007472 N-end rule aminoacyl transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 Vc3S01_2231 3c307c519ab1deb19a5dfc61d73b1ac1 233 Hamap MF_00689 Aspartate/glutamate leucyltransferase [bpt]. 6 232 36.331 T 12-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 Vc3S01_2231 3c307c519ab1deb19a5dfc61d73b1ac1 233 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 16 86 8.7E-20 T 12-10-2018 IPR007471 N-end aminoacyl transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 Vc3S01_0485 660f5dfbae0a13027974406d61511a2c 669 ProSitePatterns PS00801 Transketolase signature 1. 17 37 - T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Vc3S01_0485 660f5dfbae0a13027974406d61511a2c 669 Gene3D G3DSA:3.40.50.970 7 330 3.9E-129 T 12-10-2018 Vc3S01_0485 660f5dfbae0a13027974406d61511a2c 669 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 9 338 1.9E-165 T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Vc3S01_0485 660f5dfbae0a13027974406d61511a2c 669 SUPERFAMILY SSF52518 10 324 4.82E-119 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold Vc3S01_0485 660f5dfbae0a13027974406d61511a2c 669 Gene3D G3DSA:3.40.50.970 331 542 1.8E-85 T 12-10-2018 Vc3S01_0485 660f5dfbae0a13027974406d61511a2c 669 SUPERFAMILY SSF52922 538 669 8.64E-46 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Vc3S01_0485 660f5dfbae0a13027974406d61511a2c 669 Gene3D G3DSA:3.40.50.920 543 669 2.6E-47 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Vc3S01_0485 660f5dfbae0a13027974406d61511a2c 669 SMART SM00861 359 530 4.6E-67 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Vc3S01_0485 660f5dfbae0a13027974406d61511a2c 669 ProSitePatterns PS00802 Transketolase signature 2. 472 488 - T 12-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Vc3S01_0485 660f5dfbae0a13027974406d61511a2c 669 Pfam PF02779 Transketolase, pyrimidine binding domain 359 529 7.0E-48 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Vc3S01_0485 660f5dfbae0a13027974406d61511a2c 669 TIGRFAM TIGR00232 tktlase_bact: transketolase 10 668 0.0 T 12-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 Vc3S01_0485 660f5dfbae0a13027974406d61511a2c 669 Pfam PF02780 Transketolase, C-terminal domain 550 660 2.8E-21 T 12-10-2018 IPR033248 Transketolase, C-terminal domain Vc3S01_0485 660f5dfbae0a13027974406d61511a2c 669 SUPERFAMILY SSF52518 339 531 2.03E-68 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold Vc3S01_A1373 576e361ac214f22d1db783a42f62b62b 226 SUPERFAMILY SSF51206 21 148 1.27E-19 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like Vc3S01_A1373 576e361ac214f22d1db783a42f62b62b 226 Pfam PF00027 Cyclic nucleotide-binding domain 34 113 6.8E-11 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain Vc3S01_A1373 576e361ac214f22d1db783a42f62b62b 226 Gene3D G3DSA:2.60.120.10 12 144 1.5E-14 T 12-10-2018 IPR014710 RmlC-like jelly roll fold Vc3S01_0350 052df6d69d295f788e1bacf8d2707bc1 159 SUPERFAMILY SSF160930 2 141 1.2E-26 T 12-10-2018 Vc3S01_0350 052df6d69d295f788e1bacf8d2707bc1 159 ProDom PD016592 ACTIVATOR TRANSCRIPTIONAL FLAGELLUM FLAGELLAR TRANSCRIPTION FLHC RNA DNA-BINDING REGULATION DNA-DIRECTED 3 155 0.001 T 12-10-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 Vc3S01_0350 052df6d69d295f788e1bacf8d2707bc1 159 Pfam PF05280 Flagellar transcriptional activator (FlhC) 3 153 6.4E-12 T 12-10-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 Vc3S01_0318 56fc24095615c95b32f43db9f6e61493 197 Gene3D G3DSA:3.30.70.60 92 197 9.0E-26 T 12-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 Vc3S01_0318 56fc24095615c95b32f43db9f6e61493 197 Pfam PF04350 Pilus assembly protein, PilO 48 189 1.5E-44 T 12-10-2018 IPR007445 Pilus assembly protein, PilO Vc3S01_0318 56fc24095615c95b32f43db9f6e61493 197 PIRSF PIRSF016482 1 197 3.1E-68 T 12-10-2018 IPR007445 Pilus assembly protein, PilO Vc3S01_2169 0dbc8aaaf7411f5bcf911690b5febd5d 326 Pfam PF16806 Antiactivator protein ExsD 52 309 2.7E-69 T 12-10-2018 IPR031835 Antiactivator protein ExsD Vc3S01_3003 9b5d88e319395b794b1d2cdfe5557177 161 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 58 2.8E-17 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Vc3S01_3003 9b5d88e319395b794b1d2cdfe5557177 161 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 12 78 2.0E-4 T 12-10-2018 Vc3S01_3003 9b5d88e319395b794b1d2cdfe5557177 161 Pfam PF01467 Cytidylyltransferase-like 6 134 1.7E-19 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Vc3S01_3003 9b5d88e319395b794b1d2cdfe5557177 161 Gene3D G3DSA:3.40.50.620 1 161 3.4E-53 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Vc3S01_3003 9b5d88e319395b794b1d2cdfe5557177 161 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 5 157 2.9E-57 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Vc3S01_3003 9b5d88e319395b794b1d2cdfe5557177 161 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 159 34.751 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Vc3S01_3003 9b5d88e319395b794b1d2cdfe5557177 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 50 74 5.7E-49 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Vc3S01_3003 9b5d88e319395b794b1d2cdfe5557177 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 102 5.7E-49 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Vc3S01_3003 9b5d88e319395b794b1d2cdfe5557177 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 5.7E-49 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Vc3S01_3003 9b5d88e319395b794b1d2cdfe5557177 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 5.7E-49 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Vc3S01_3003 9b5d88e319395b794b1d2cdfe5557177 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 5.7E-49 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Vc3S01_3003 9b5d88e319395b794b1d2cdfe5557177 161 SUPERFAMILY SSF52374 3 156 2.95E-43 T 12-10-2018 Vc3S01_2656 d235fa475608dff73c3535a699b64b3e 301 Pfam PF03466 LysR substrate binding domain 96 299 1.2E-37 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_2656 d235fa475608dff73c3535a699b64b3e 301 Gene3D G3DSA:1.10.10.10 2 89 6.8E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_2656 d235fa475608dff73c3535a699b64b3e 301 Gene3D G3DSA:3.40.190.10 168 269 3.1E-54 T 12-10-2018 Vc3S01_2656 d235fa475608dff73c3535a699b64b3e 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 68 4.8E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_2656 d235fa475608dff73c3535a699b64b3e 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 7.3E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_2656 d235fa475608dff73c3535a699b64b3e 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 7.3E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_2656 d235fa475608dff73c3535a699b64b3e 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 7.3E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_2656 d235fa475608dff73c3535a699b64b3e 301 SUPERFAMILY SSF46785 4 117 4.51E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_2656 d235fa475608dff73c3535a699b64b3e 301 SUPERFAMILY SSF53850 95 300 5.35E-35 T 12-10-2018 Vc3S01_2656 d235fa475608dff73c3535a699b64b3e 301 Gene3D G3DSA:3.40.190.10 98 298 3.1E-54 T 12-10-2018 Vc3S01_A0247 16cd56353145ef53602724289834d28d 336 Gene3D G3DSA:3.40.190.10 120 263 1.1E-89 T 12-10-2018 Vc3S01_A0247 16cd56353145ef53602724289834d28d 336 Gene3D G3DSA:3.40.190.10 32 326 1.1E-89 T 12-10-2018 Vc3S01_A0247 16cd56353145ef53602724289834d28d 336 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 3 326 2.8E-108 T 12-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family Vc3S01_A0247 16cd56353145ef53602724289834d28d 336 Pfam PF16868 NMT1-like family 32 326 1.4E-111 T 12-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family Vc3S01_A0247 16cd56353145ef53602724289834d28d 336 SUPERFAMILY SSF53850 29 327 1.18E-64 T 12-10-2018 Vc3S01_A0557 7f3e871793e3d59f68fa335d30bee82d 153 Gene3D G3DSA:1.10.287.790 61 110 1.3E-31 T 12-10-2018 IPR027404 LuxT regulator, helix hairpin domain superfamily Vc3S01_A0557 7f3e871793e3d59f68fa335d30bee82d 153 Gene3D G3DSA:1.20.5.830 111 153 4.7E-29 T 12-10-2018 IPR027402 LuxT regulator, C-terminal domain superfamily Vc3S01_A0557 7f3e871793e3d59f68fa335d30bee82d 153 Gene3D G3DSA:1.10.10.60 2 60 4.3E-8 T 12-10-2018 Vc3S01_A0557 7f3e871793e3d59f68fa335d30bee82d 153 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 1.8E-4 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Vc3S01_A0557 7f3e871793e3d59f68fa335d30bee82d 153 SUPERFAMILY SSF46689 1 74 1.08E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_A0891 67cb4d782cc12487918d9cb583fc7ca7 132 SUPERFAMILY SSF55298 13 128 4.56E-29 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Vc3S01_A0891 67cb4d782cc12487918d9cb583fc7ca7 132 Gene3D G3DSA:3.30.1330.40 9 127 2.3E-28 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Vc3S01_A0891 67cb4d782cc12487918d9cb583fc7ca7 132 Pfam PF01042 Endoribonuclease L-PSP 17 126 2.6E-22 T 12-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 Vc3S01_A0925 3bfaa1dfc17afcc56d5f9a798b256a1a 158 Gene3D G3DSA:2.60.40.1890 37 151 8.5E-39 T 12-10-2018 IPR036182 Copper chaperone PCuAC superfamily Vc3S01_A0925 3bfaa1dfc17afcc56d5f9a798b256a1a 158 SUPERFAMILY SSF110087 5 148 9.68E-50 T 12-10-2018 IPR036182 Copper chaperone PCuAC superfamily Vc3S01_A0925 3bfaa1dfc17afcc56d5f9a798b256a1a 158 Pfam PF04314 Copper chaperone PCu(A)C 33 141 4.3E-39 T 12-10-2018 IPR007410 Copper chaperone PCuAC Vc3S01_2933 a026e4fb74a07323ace10283121e7f98 84 PRINTS PR00973 Ribosomal protein S17 family signature 24 47 8.9E-15 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_2933 a026e4fb74a07323ace10283121e7f98 84 PRINTS PR00973 Ribosomal protein S17 family signature 56 66 8.9E-15 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_2933 a026e4fb74a07323ace10283121e7f98 84 PRINTS PR00973 Ribosomal protein S17 family signature 66 73 8.9E-15 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_2933 a026e4fb74a07323ace10283121e7f98 84 ProSitePatterns PS00056 Ribosomal protein S17 signature. 56 68 - T 12-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Vc3S01_2933 a026e4fb74a07323ace10283121e7f98 84 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 5 76 8.0E-36 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_2933 a026e4fb74a07323ace10283121e7f98 84 Gene3D G3DSA:2.40.50.140 1 84 2.1E-38 T 12-10-2018 Vc3S01_2933 a026e4fb74a07323ace10283121e7f98 84 Pfam PF00366 Ribosomal protein S17 10 77 1.5E-34 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_2933 a026e4fb74a07323ace10283121e7f98 84 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 5 80 25.567 T 12-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_2933 a026e4fb74a07323ace10283121e7f98 84 SUPERFAMILY SSF50249 6 83 6.0E-34 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Vc3S01_2933 a026e4fb74a07323ace10283121e7f98 84 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 5 76 1.6E-38 T 12-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_1893 bf4fd01b303a08fd380652e3ac2dd29b 235 SUPERFAMILY SSF64288 56 231 4.4E-36 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Vc3S01_1893 bf4fd01b303a08fd380652e3ac2dd29b 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 1.6E-6 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Vc3S01_1893 bf4fd01b303a08fd380652e3ac2dd29b 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 1.6E-6 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Vc3S01_1893 bf4fd01b303a08fd380652e3ac2dd29b 235 SMART SM00866 91 228 2.4E-26 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 Vc3S01_1893 bf4fd01b303a08fd380652e3ac2dd29b 235 Pfam PF07702 UTRA domain 92 228 7.7E-32 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 Vc3S01_1893 bf4fd01b303a08fd380652e3ac2dd29b 235 SUPERFAMILY SSF46785 3 72 2.12E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_1893 bf4fd01b303a08fd380652e3ac2dd29b 235 Gene3D G3DSA:1.10.10.10 1 69 5.7E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_1893 bf4fd01b303a08fd380652e3ac2dd29b 235 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 4 233 2.1E-91 T 12-10-2018 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 Vc3S01_1893 bf4fd01b303a08fd380652e3ac2dd29b 235 SMART SM00345 9 68 4.9E-18 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Vc3S01_1893 bf4fd01b303a08fd380652e3ac2dd29b 235 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 68 4.9E-17 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Vc3S01_1893 bf4fd01b303a08fd380652e3ac2dd29b 235 Gene3D G3DSA:3.40.1410.10 89 224 4.9E-30 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Vc3S01_2329 3664a37c50a9b63549e03b562ff628e1 453 PIRSF PIRSF006066 1 269 2.0E-91 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Vc3S01_2329 3664a37c50a9b63549e03b562ff628e1 453 PIRSF PIRSF006066 271 447 5.0E-49 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Vc3S01_2329 3664a37c50a9b63549e03b562ff628e1 453 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 437 2.7E-117 T 12-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Vc3S01_2329 3664a37c50a9b63549e03b562ff628e1 453 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 260 2.2E-85 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Vc3S01_2155 8996a35e3ab7e1cd4744414933de64c4 145 Pfam PF05932 Tir chaperone protein (CesT) family 8 112 1.4E-8 T 12-10-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 Vc3S01_2155 8996a35e3ab7e1cd4744414933de64c4 145 Gene3D G3DSA:3.30.1460.10 1 118 1.6E-24 T 12-10-2018 Vc3S01_2155 8996a35e3ab7e1cd4744414933de64c4 145 SUPERFAMILY SSF69635 3 118 9.94E-28 T 12-10-2018 Vc3S01_A1938 bcc77208ab7d7544281170d31fa2dc24 821 Pfam PF13953 PapC C-terminal domain 751 801 2.8E-11 T 12-10-2018 IPR025949 PapC-like, C-terminal domain Vc3S01_A1938 bcc77208ab7d7544281170d31fa2dc24 821 Pfam PF13954 PapC N-terminal domain 23 163 1.3E-26 T 12-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 Vc3S01_A1938 bcc77208ab7d7544281170d31fa2dc24 821 Gene3D G3DSA:2.60.40.2610 651 741 8.4E-12 T 12-10-2018 Vc3S01_A1938 bcc77208ab7d7544281170d31fa2dc24 821 SUPERFAMILY SSF141729 21 137 5.36E-16 T 12-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 Vc3S01_A1938 bcc77208ab7d7544281170d31fa2dc24 821 Gene3D G3DSA:2.60.40.2070 745 819 1.4E-12 T 12-10-2018 Vc3S01_A1938 bcc77208ab7d7544281170d31fa2dc24 821 Gene3D G3DSA:3.10.20.410 21 139 4.7E-16 T 12-10-2018 Vc3S01_A1938 bcc77208ab7d7544281170d31fa2dc24 821 Pfam PF00577 Outer membrane usher protein 182 735 9.9E-120 T 12-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 Vc3S01_A1938 bcc77208ab7d7544281170d31fa2dc24 821 Gene3D G3DSA:2.60.40.3110 245 332 1.7E-22 T 12-10-2018 Vc3S01_0527 073d9343d98930c6ca22a3a19e3b2a04 158 SUPERFAMILY SSF69765 1 157 7.72E-66 T 12-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Vc3S01_0527 073d9343d98930c6ca22a3a19e3b2a04 158 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 3 157 3.8E-69 T 12-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Vc3S01_0527 073d9343d98930c6ca22a3a19e3b2a04 158 Pfam PF02542 YgbB family 2 155 8.6E-66 T 12-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Vc3S01_0527 073d9343d98930c6ca22a3a19e3b2a04 158 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 2 157 36.091 T 12-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Vc3S01_0527 073d9343d98930c6ca22a3a19e3b2a04 158 Gene3D G3DSA:3.30.1330.50 1 158 7.6E-70 T 12-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Vc3S01_0527 073d9343d98930c6ca22a3a19e3b2a04 158 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 36 51 - T 12-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Vc3S01_2882 70e3d301030e227834d1eeedf910ea7d 234 Gene3D G3DSA:3.40.50.300 1 233 4.2E-59 T 12-10-2018 Vc3S01_2882 70e3d301030e227834d1eeedf910ea7d 234 TIGRFAM TIGR01277 thiQ: thiamine ABC transporter, ATP-binding protein 2 211 4.1E-100 T 12-10-2018 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ GO:0005524|GO:0016021|GO:0042626|GO:0071934 Vc3S01_2882 70e3d301030e227834d1eeedf910ea7d 234 SMART SM00382 24 209 1.2E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_2882 70e3d301030e227834d1eeedf910ea7d 234 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_2882 70e3d301030e227834d1eeedf910ea7d 234 SUPERFAMILY SSF52540 1 231 2.88E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2882 70e3d301030e227834d1eeedf910ea7d 234 Pfam PF00005 ABC transporter 18 157 1.8E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_A1062 f6cbe1d647c1907a4d22ddd51c5e594c 179 Gene3D G3DSA:1.20.950.20 2 83 9.8E-7 T 12-10-2018 Vc3S01_A1062 f6cbe1d647c1907a4d22ddd51c5e594c 179 SUPERFAMILY SSF81342 4 175 4.63E-36 T 12-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 Vc3S01_A1062 f6cbe1d647c1907a4d22ddd51c5e594c 179 Pfam PF01292 Prokaryotic cytochrome b561 8 176 1.2E-31 T 12-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 Vc3S01_A1565 c13e79a62526fb3dafe156dc965f89f9 177 Pfam PF13302 Acetyltransferase (GNAT) domain 5 139 3.3E-21 T 12-10-2018 IPR000182 GNAT domain Vc3S01_A1565 c13e79a62526fb3dafe156dc965f89f9 177 SUPERFAMILY SSF55729 3 164 3.19E-42 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_A1565 c13e79a62526fb3dafe156dc965f89f9 177 Gene3D G3DSA:3.40.630.30 5 171 8.5E-52 T 12-10-2018 Vc3S01_A0976 99688d896995b3d9d270edd4d1d98c05 200 SUPERFAMILY SSF56925 28 200 1.49E-8 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel Vc3S01_A0976 99688d896995b3d9d270edd4d1d98c05 200 Pfam PF13505 Outer membrane protein beta-barrel domain 8 176 3.1E-7 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel Vc3S01_A0976 99688d896995b3d9d270edd4d1d98c05 200 Gene3D G3DSA:2.40.160.20 28 200 1.8E-24 T 12-10-2018 Vc3S01_p40104 ff1376c043f08ceefc93309b8a18f9ce 264 Gene3D G3DSA:2.60.40.2500 136 264 4.3E-33 T 12-10-2018 IPR038161 VirB9/CagX/TrbG, C-terminal domain superfamily Vc3S01_p40104 ff1376c043f08ceefc93309b8a18f9ce 264 Pfam PF03524 Conjugal transfer protein 32 236 6.2E-49 T 12-10-2018 IPR010258 Conjugal transfer, TrbG/VirB9/CagX Vc3S01_0231 1fd697e10758260beff463efe0bb2186 313 SUPERFAMILY SSF55681 3 310 1.07E-79 T 12-10-2018 Vc3S01_0231 1fd697e10758260beff463efe0bb2186 313 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 4 308 2.7E-127 T 12-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 Vc3S01_0231 1fd697e10758260beff463efe0bb2186 313 Pfam PF00152 tRNA synthetases class II (D, K and N) 3 309 5.0E-44 T 12-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Vc3S01_0231 1fd697e10758260beff463efe0bb2186 313 Gene3D G3DSA:3.30.930.10 1 312 2.8E-106 T 12-10-2018 Vc3S01_2142 12b912cffc64d8c7ba61c00032f78784 94 ProDom PD029314 TYEA PLASMID ACR1 SECRETION CONTROL TARGETING TYPE LSSA VP1666 TARGET 1 75 3.0E-37 T 12-10-2018 IPR015144 Type III secretion system effector delivery regulator TyeA Vc3S01_2142 12b912cffc64d8c7ba61c00032f78784 94 Gene3D G3DSA:1.20.1280.80 1 92 6.7E-36 T 12-10-2018 IPR038347 TyeA superfamily Vc3S01_2142 12b912cffc64d8c7ba61c00032f78784 94 SUPERFAMILY SSF140591 3 92 1.49E-31 T 12-10-2018 Vc3S01_2142 12b912cffc64d8c7ba61c00032f78784 94 Pfam PF09059 TyeA 7 86 2.6E-32 T 12-10-2018 IPR015144 Type III secretion system effector delivery regulator TyeA Vc3S01_2142 12b912cffc64d8c7ba61c00032f78784 94 TIGRFAM TIGR02511 type_III_tyeA: type III secretion effector delivery regulator, TyeA family 3 84 7.2E-29 T 12-10-2018 IPR013351 Type III secretion system effector delivery regulator TyeA-related Vc3S01_0907 30ad87014b0aaae79c02fa92c9cf1a63 131 Gene3D G3DSA:3.40.50.360 1 131 2.3E-22 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Vc3S01_0907 30ad87014b0aaae79c02fa92c9cf1a63 131 Pfam PF03358 NADPH-dependent FMN reductase 2 92 9.6E-16 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 Vc3S01_0907 30ad87014b0aaae79c02fa92c9cf1a63 131 SUPERFAMILY SSF52218 12 130 1.5E-23 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Vc3S01_2796 f4ef321a0ffc0f7b41c803c013936abf 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 33.795 T 12-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid Vc3S01_2796 f4ef321a0ffc0f7b41c803c013936abf 130 Gene3D G3DSA:3.30.230.10 1 130 5.4E-54 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Vc3S01_2796 f4ef321a0ffc0f7b41c803c013936abf 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 12-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 Vc3S01_2796 f4ef321a0ffc0f7b41c803c013936abf 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 2.3E-46 T 12-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 Vc3S01_2796 f4ef321a0ffc0f7b41c803c013936abf 130 SUPERFAMILY SSF54211 5 130 2.54E-48 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Vc3S01_0664 3ae84c9b641feb9feed27c7b17dd1ffb 227 Gene3D G3DSA:2.60.40.10 32 144 2.4E-6 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_0664 3ae84c9b641feb9feed27c7b17dd1ffb 227 SUPERFAMILY SSF49354 33 145 4.97E-16 T 12-10-2018 IPR008962 PapD-like superfamily Vc3S01_0664 3ae84c9b641feb9feed27c7b17dd1ffb 227 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 38 146 2.6E-9 T 12-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 Vc3S01_A1934 e028e244ee4ccb508c36d7b163093975 128 Pfam PF10807 Protein of unknown function (DUF2541) 7 115 5.4E-9 T 12-10-2018 IPR020240 Uncharacterised protein family UPF0412, YaaI Vc3S01_2205 1c0ed36f1b819946d8bd123f83d2a8a1 322 TIGRFAM TIGR02291 rimK_rel_E_lig: alpha-L-glutamate ligase homolog 5 319 2.8E-174 T 12-10-2018 IPR011758 Alpha-L-glutamate ligase-related protein Vc3S01_2205 1c0ed36f1b819946d8bd123f83d2a8a1 322 SUPERFAMILY SSF56059 36 277 1.54E-19 T 12-10-2018 Vc3S01_2205 1c0ed36f1b819946d8bd123f83d2a8a1 322 Pfam PF14397 Sugar-transfer associated ATP-grasp 22 295 9.9E-115 T 12-10-2018 IPR039523 Alpha-L-glutamate ligase-related protein, ATP-grasp domain KEGG: 00270+6.3.2.2+6.3.2.3|KEGG: 00480+6.3.2.2+6.3.2.3|MetaCyc: PWY-6840|MetaCyc: PWY-7255 Vc3S01_p20099 58aa1f0443446019602ccfe3a316b001 361 Gene3D G3DSA:3.30.420.40 192 327 2.2E-22 T 12-10-2018 Vc3S01_p20099 58aa1f0443446019602ccfe3a316b001 361 SUPERFAMILY SSF53067 9 174 9.06E-10 T 12-10-2018 Vc3S01_p20099 58aa1f0443446019602ccfe3a316b001 361 SUPERFAMILY SSF53067 192 350 1.01E-13 T 12-10-2018 Vc3S01_p20099 58aa1f0443446019602ccfe3a316b001 361 Gene3D G3DSA:3.30.420.40 8 189 1.2E-29 T 12-10-2018 Vc3S01_A1319 b5577cc2c09c42935acd9bb63f143c7c 455 TIGRFAM TIGR00771 DcuC: transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family 55 441 9.5E-140 T 12-10-2018 IPR004669 C4-dicarboxylate anaerobic carrier GO:0015556|GO:0015740|GO:0016021 Vc3S01_A1319 b5577cc2c09c42935acd9bb63f143c7c 455 Pfam PF03606 C4-dicarboxylate anaerobic carrier 2 451 3.2E-123 T 12-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 Vc3S01_p10046 df4c7ec0c462397e43b3a5a5465d5e83 135 Gene3D G3DSA:1.10.287.1050 1 82 1.5E-9 T 12-10-2018 IPR027454 Histone-like protein H-NS, N-terminal GO:0046983 Vc3S01_p10046 df4c7ec0c462397e43b3a5a5465d5e83 135 Pfam PF00816 H-NS histone family 37 125 6.4E-9 T 12-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 Vc3S01_p10046 df4c7ec0c462397e43b3a5a5465d5e83 135 Gene3D G3DSA:4.10.430.10 83 134 3.5E-6 T 12-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 Vc3S01_p10046 df4c7ec0c462397e43b3a5a5465d5e83 135 SUPERFAMILY SSF81273 102 132 7.45E-5 T 12-10-2018 Vc3S01_p40119 884afc141916870a05836489ed38f988 146 Gene3D G3DSA:2.40.50.140 77 146 4.5E-10 T 12-10-2018 Vc3S01_p40119 884afc141916870a05836489ed38f988 146 Pfam PF01957 NfeD-like C-terminal, partner-binding 10 145 2.0E-19 T 12-10-2018 IPR002810 NfeD-like, C-terminal domain Vc3S01_p40119 884afc141916870a05836489ed38f988 146 SUPERFAMILY SSF141322 107 145 6.02E-6 T 12-10-2018 Vc3S01_1228 4d48bbb55e4bb6aa81c6e1ef34debf49 207 SUPERFAMILY SSF48452 76 190 3.8E-12 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_1228 4d48bbb55e4bb6aa81c6e1ef34debf49 207 Gene3D G3DSA:1.25.40.10 115 206 8.3E-27 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_2318 6f3dc21b71eab28915c215afa67f5f7e 128 TIGRFAM TIGR03902 rhom_GG_sort: rhombosortase 1 116 7.0E-32 T 12-10-2018 IPR023826 Rhomboid-like serine protease, proteobacteria Vc3S01_2318 6f3dc21b71eab28915c215afa67f5f7e 128 Gene3D G3DSA:1.20.1540.10 1 126 8.7E-9 T 12-10-2018 IPR035952 Rhomboid-like superfamily Vc3S01_2318 6f3dc21b71eab28915c215afa67f5f7e 128 SUPERFAMILY SSF144091 1 121 8.24E-15 T 12-10-2018 Vc3S01_2318 6f3dc21b71eab28915c215afa67f5f7e 128 Pfam PF01694 Rhomboid family 1 118 7.5E-7 T 12-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 Vc3S01_2052 156772d0c6952975773bf7c8080121f5 346 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 6 343 1.3E-117 T 12-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 Vc3S01_2052 156772d0c6952975773bf7c8080121f5 346 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 4 345 52.926 T 12-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 Vc3S01_2052 156772d0c6952975773bf7c8080121f5 346 Pfam PF00155 Aminotransferase class I and II 42 337 1.8E-54 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Vc3S01_2052 156772d0c6952975773bf7c8080121f5 346 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 206 215 - T 12-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 Vc3S01_2052 156772d0c6952975773bf7c8080121f5 346 Gene3D G3DSA:3.40.640.10 49 253 2.8E-120 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Vc3S01_2052 156772d0c6952975773bf7c8080121f5 346 Gene3D G3DSA:3.90.1150.10 4 336 2.8E-120 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Vc3S01_2052 156772d0c6952975773bf7c8080121f5 346 SUPERFAMILY SSF53383 9 343 1.65E-73 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Vc3S01_1798 d2768ff789aff6fbe2ef6f3f37660c3c 364 Pfam PF04209 homogentisate 1,2-dioxygenase 42 362 1.8E-22 T 12-10-2018 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 Vc3S01_1798 d2768ff789aff6fbe2ef6f3f37660c3c 364 SUPERFAMILY SSF51182 42 362 6.51E-91 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily Vc3S01_1798 d2768ff789aff6fbe2ef6f3f37660c3c 364 Gene3D G3DSA:2.60.120.10 53 155 2.4E-12 T 12-10-2018 IPR014710 RmlC-like jelly roll fold Vc3S01_A1730 8dec52336244913e02c782997b672f02 330 Gene3D G3DSA:3.40.190.100 111 247 4.9E-37 T 12-10-2018 Vc3S01_A1730 8dec52336244913e02c782997b672f02 330 SUPERFAMILY SSF53850 21 325 3.26E-70 T 12-10-2018 Vc3S01_A1730 8dec52336244913e02c782997b672f02 330 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 26 308 2.4E-62 T 12-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 Vc3S01_A1730 8dec52336244913e02c782997b672f02 330 Gene3D G3DSA:3.40.190.10 27 318 4.9E-37 T 12-10-2018 Vc3S01_A0937 0a914b60bbc89c896141f2e03d03b4b9 592 Gene3D G3DSA:3.40.50.200 19 434 6.2E-99 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Vc3S01_A0937 0a914b60bbc89c896141f2e03d03b4b9 592 Gene3D G3DSA:2.60.120.260 438 592 1.5E-50 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily Vc3S01_A0937 0a914b60bbc89c896141f2e03d03b4b9 592 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 70 81 - T 12-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site Vc3S01_A0937 0a914b60bbc89c896141f2e03d03b4b9 592 PRINTS PR00723 Subtilisin serine protease family (S8) signature 108 121 2.4E-17 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related Vc3S01_A0937 0a914b60bbc89c896141f2e03d03b4b9 592 PRINTS PR00723 Subtilisin serine protease family (S8) signature 338 354 2.4E-17 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related Vc3S01_A0937 0a914b60bbc89c896141f2e03d03b4b9 592 PRINTS PR00723 Subtilisin serine protease family (S8) signature 65 84 2.4E-17 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related Vc3S01_A0937 0a914b60bbc89c896141f2e03d03b4b9 592 SUPERFAMILY SSF49785 438 592 4.21E-25 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily Vc3S01_A0937 0a914b60bbc89c896141f2e03d03b4b9 592 Pfam PF00082 Subtilase family 65 382 2.3E-31 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 Vc3S01_A0937 0a914b60bbc89c896141f2e03d03b4b9 592 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 339 349 - T 12-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site Vc3S01_A0937 0a914b60bbc89c896141f2e03d03b4b9 592 Pfam PF01483 Proprotein convertase P-domain 475 556 2.9E-20 T 12-10-2018 IPR002884 P domain GO:0004252|GO:0006508 Vc3S01_A0937 0a914b60bbc89c896141f2e03d03b4b9 592 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 112 122 - T 12-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site Vc3S01_A0937 0a914b60bbc89c896141f2e03d03b4b9 592 SUPERFAMILY SSF52743 23 432 2.09E-58 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Vc3S01_1643 4c84574629b9fcdc9b4dda7713e6e3d1 546 Pfam PF13654 AAA domain 77 288 1.4E-24 T 12-10-2018 Vc3S01_1643 4c84574629b9fcdc9b4dda7713e6e3d1 546 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 400 504 1.9E-10 T 12-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 Vc3S01_1643 4c84574629b9fcdc9b4dda7713e6e3d1 546 Gene3D G3DSA:3.30.230.10 291 532 3.0E-91 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Vc3S01_1643 4c84574629b9fcdc9b4dda7713e6e3d1 546 SUPERFAMILY SSF54211 314 506 7.21E-34 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Vc3S01_1643 4c84574629b9fcdc9b4dda7713e6e3d1 546 Gene3D G3DSA:3.40.50.300 15 203 9.9E-13 T 12-10-2018 Vc3S01_1643 4c84574629b9fcdc9b4dda7713e6e3d1 546 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 397 416 1.2E-10 T 12-10-2018 Vc3S01_1643 4c84574629b9fcdc9b4dda7713e6e3d1 546 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 427 446 1.2E-10 T 12-10-2018 Vc3S01_1643 4c84574629b9fcdc9b4dda7713e6e3d1 546 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 314 330 1.2E-10 T 12-10-2018 Vc3S01_1643 4c84574629b9fcdc9b4dda7713e6e3d1 546 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 457 475 1.2E-10 T 12-10-2018 Vc3S01_A1982 4527ca9ebca6028d1d4d27d1c9f3eb35 302 PIRSF PIRSF000103 1 293 5.9E-57 T 12-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 Vc3S01_A1982 4527ca9ebca6028d1d4d27d1c9f3eb35 302 Gene3D G3DSA:3.40.50.720 2 167 4.1E-40 T 12-10-2018 Vc3S01_A1982 4527ca9ebca6028d1d4d27d1c9f3eb35 302 SUPERFAMILY SSF51735 6 167 1.2E-34 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_A1982 4527ca9ebca6028d1d4d27d1c9f3eb35 302 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 9 22 - T 12-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 Vc3S01_A1982 4527ca9ebca6028d1d4d27d1c9f3eb35 302 Gene3D G3DSA:1.10.1040.10 168 292 1.6E-38 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Vc3S01_A1982 4527ca9ebca6028d1d4d27d1c9f3eb35 302 SUPERFAMILY SSF48179 168 291 5.78E-36 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Vc3S01_A1982 4527ca9ebca6028d1d4d27d1c9f3eb35 302 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 169 288 5.2E-32 T 12-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 Vc3S01_A1982 4527ca9ebca6028d1d4d27d1c9f3eb35 302 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 7 165 3.4E-38 T 12-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 Vc3S01_A0390 f79e9425037e5b8290708ae1eb0d8b6a 301 Gene3D G3DSA:3.40.190.10 170 268 1.5E-35 T 12-10-2018 Vc3S01_A0390 f79e9425037e5b8290708ae1eb0d8b6a 301 Gene3D G3DSA:3.40.190.10 94 291 1.5E-35 T 12-10-2018 Vc3S01_A0390 f79e9425037e5b8290708ae1eb0d8b6a 301 Pfam PF03466 LysR substrate binding domain 93 296 1.1E-15 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_A0390 f79e9425037e5b8290708ae1eb0d8b6a 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.2E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A0390 f79e9425037e5b8290708ae1eb0d8b6a 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.2E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A0390 f79e9425037e5b8290708ae1eb0d8b6a 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.2E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A0390 f79e9425037e5b8290708ae1eb0d8b6a 301 Gene3D G3DSA:1.10.10.10 2 89 7.5E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A0390 f79e9425037e5b8290708ae1eb0d8b6a 301 SUPERFAMILY SSF46785 4 86 3.55E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A0390 f79e9425037e5b8290708ae1eb0d8b6a 301 SUPERFAMILY SSF53850 94 296 4.45E-30 T 12-10-2018 Vc3S01_A0390 f79e9425037e5b8290708ae1eb0d8b6a 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 1.3E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A1814 a8f7162971428f9c779ca93c0ab8dc29 727 Pfam PF04632 Fusaric acid resistance protein family 6 527 7.8E-43 T 12-10-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0022857|GO:0055085 Vc3S01_2440 d01ce480f77ce82c46123c2712f65d97 763 Pfam PF03170 Bacterial cellulose synthase subunit 50 661 1.8E-209 T 12-10-2018 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 Vc3S01_2440 d01ce480f77ce82c46123c2712f65d97 763 Gene3D G3DSA:2.60.120.260 338 496 2.0E-29 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily Vc3S01_2440 d01ce480f77ce82c46123c2712f65d97 763 Gene3D G3DSA:2.60.120.260 52 179 9.5E-19 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily Vc3S01_2440 d01ce480f77ce82c46123c2712f65d97 763 PRINTS PR01440 Cellulose synthase subunit B signature 125 148 6.2E-40 T 12-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 Vc3S01_2440 d01ce480f77ce82c46123c2712f65d97 763 PRINTS PR01440 Cellulose synthase subunit B signature 372 393 6.2E-40 T 12-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 Vc3S01_2440 d01ce480f77ce82c46123c2712f65d97 763 PRINTS PR01440 Cellulose synthase subunit B signature 289 310 6.2E-40 T 12-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 Vc3S01_2440 d01ce480f77ce82c46123c2712f65d97 763 PRINTS PR01440 Cellulose synthase subunit B signature 700 720 6.2E-40 T 12-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 Vc3S01_2440 d01ce480f77ce82c46123c2712f65d97 763 PRINTS PR01440 Cellulose synthase subunit B signature 504 523 6.2E-40 T 12-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 Vc3S01_2440 d01ce480f77ce82c46123c2712f65d97 763 PRINTS PR01440 Cellulose synthase subunit B signature 166 187 6.2E-40 T 12-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 Vc3S01_2440 d01ce480f77ce82c46123c2712f65d97 763 PRINTS PR01440 Cellulose synthase subunit B signature 208 231 6.2E-40 T 12-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 Vc3S01_2440 d01ce480f77ce82c46123c2712f65d97 763 PRINTS PR01440 Cellulose synthase subunit B signature 456 475 6.2E-40 T 12-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 Vc3S01_2440 d01ce480f77ce82c46123c2712f65d97 763 PRINTS PR01440 Cellulose synthase subunit B signature 541 561 6.2E-40 T 12-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 Vc3S01_2440 d01ce480f77ce82c46123c2712f65d97 763 PRINTS PR01440 Cellulose synthase subunit B signature 76 97 6.2E-40 T 12-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 Vc3S01_A0932 41a6851fdb542a8d677147433622085f 242 Gene3D G3DSA:1.10.10.10 146 242 1.1E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A0932 41a6851fdb542a8d677147433622085f 242 SUPERFAMILY SSF46894 142 240 3.4E-19 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Vc3S01_A0932 41a6851fdb542a8d677147433622085f 242 Gene3D G3DSA:3.40.50.2300 9 144 1.3E-37 T 12-10-2018 Vc3S01_A0932 41a6851fdb542a8d677147433622085f 242 Pfam PF00072 Response regulator receiver domain 23 133 3.7E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A0932 41a6851fdb542a8d677147433622085f 242 SMART SM00448 21 133 7.9E-44 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A0932 41a6851fdb542a8d677147433622085f 242 SUPERFAMILY SSF52172 21 141 2.13E-38 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_A0932 41a6851fdb542a8d677147433622085f 242 Pfam PF00486 Transcriptional regulatory protein, C terminal 166 240 8.0E-18 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Vc3S01_A0932 41a6851fdb542a8d677147433622085f 242 SMART SM00862 166 240 6.6E-16 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Vc3S01_2309 ecb1429467904f5d8556b9836dc0b5c6 329 Pfam PF13378 Enolase C-terminal domain-like 125 283 1.1E-12 T 12-10-2018 IPR029065 Enolase C-terminal domain-like Vc3S01_2309 ecb1429467904f5d8556b9836dc0b5c6 329 SUPERFAMILY SSF51604 107 321 5.63E-47 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Vc3S01_2309 ecb1429467904f5d8556b9836dc0b5c6 329 Gene3D G3DSA:3.30.390.10 4 306 1.3E-113 T 12-10-2018 IPR029017 Enolase-like, N-terminal Vc3S01_2309 ecb1429467904f5d8556b9836dc0b5c6 329 SMART SM00922 116 213 5.6E-7 T 12-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal Vc3S01_2309 ecb1429467904f5d8556b9836dc0b5c6 329 Gene3D G3DSA:3.20.20.120 99 300 1.3E-113 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Vc3S01_2309 ecb1429467904f5d8556b9836dc0b5c6 329 SUPERFAMILY SSF54826 1 100 1.16E-24 T 12-10-2018 Vc3S01_2309 ecb1429467904f5d8556b9836dc0b5c6 329 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 4 326 20.617 T 12-10-2018 IPR010196 o-Succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 Vc3S01_2309 ecb1429467904f5d8556b9836dc0b5c6 329 TIGRFAM TIGR01927 menC_gamma/gm+: o-succinylbenzoate synthase 7 311 2.5E-111 T 12-10-2018 Vc3S01_p10007 24de43a80d9535aba5efe11d6ef4dc54 328 SUPERFAMILY SSF57997 118 327 6.21E-5 T 12-10-2018 Vc3S01_p10007 24de43a80d9535aba5efe11d6ef4dc54 328 Gene3D G3DSA:1.20.5.340 189 280 8.5E-6 T 12-10-2018 Vc3S01_1149 843a84b5101e5c643b49c1dabc62902a 378 Gene3D G3DSA:2.40.420.20 40 367 5.9E-53 T 12-10-2018 Vc3S01_1149 843a84b5101e5c643b49c1dabc62902a 378 Gene3D G3DSA:2.40.30.170 45 307 5.9E-53 T 12-10-2018 Vc3S01_1149 843a84b5101e5c643b49c1dabc62902a 378 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 56 256 1.2E-15 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Vc3S01_1149 843a84b5101e5c643b49c1dabc62902a 378 Gene3D G3DSA:1.10.287.470 90 176 5.9E-53 T 12-10-2018 Vc3S01_1149 843a84b5101e5c643b49c1dabc62902a 378 SUPERFAMILY SSF111369 49 254 2.62E-15 T 12-10-2018 Vc3S01_1149 843a84b5101e5c643b49c1dabc62902a 378 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 34 367 1.2E-35 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Vc3S01_1149 843a84b5101e5c643b49c1dabc62902a 378 Gene3D G3DSA:2.40.50.100 56 216 5.9E-53 T 12-10-2018 Vc3S01_0407 3401ec5c00751f9e02760ddf7f4c1d21 250 Pfam PF00849 RNA pseudouridylate synthase 23 174 5.4E-29 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Vc3S01_0407 3401ec5c00751f9e02760ddf7f4c1d21 250 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 60 74 - T 12-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Vc3S01_0407 3401ec5c00751f9e02760ddf7f4c1d21 250 SUPERFAMILY SSF55120 7 221 1.57E-61 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Vc3S01_0407 3401ec5c00751f9e02760ddf7f4c1d21 250 Gene3D G3DSA:3.30.2350.10 4 220 2.0E-68 T 12-10-2018 Vc3S01_2474 6412e577793132293e785e4068bf1420 116 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 3 114 5.2E-25 T 12-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 Vc3S01_2474 6412e577793132293e785e4068bf1420 116 PIRSF PIRSF002889 1 116 1.8E-27 T 12-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 Vc3S01_0812 f3c5691f34e227c3aabe0f2e89a7881e 191 SUPERFAMILY SSF53697 1 189 2.83E-51 T 12-10-2018 Vc3S01_0812 f3c5691f34e227c3aabe0f2e89a7881e 191 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 35 187 6.4E-81 T 12-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 Vc3S01_0812 f3c5691f34e227c3aabe0f2e89a7881e 191 Pfam PF13580 SIS domain 12 146 9.5E-30 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Vc3S01_0812 f3c5691f34e227c3aabe0f2e89a7881e 191 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 37.592 T 12-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 Vc3S01_0812 f3c5691f34e227c3aabe0f2e89a7881e 191 Gene3D G3DSA:3.40.50.10490 1 191 4.4E-70 T 12-10-2018 Vc3S01_A0941 d57f00e3038f82a91712a901c29337c2 418 Pfam PF03222 Tryptophan/tyrosine permease family 31 408 5.1E-17 T 12-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 Vc3S01_p20073 3f826df3b3ef30237e58630ddf214d5b 618 Gene3D G3DSA:3.40.50.150 271 481 1.4E-15 T 12-10-2018 Vc3S01_p20073 3f826df3b3ef30237e58630ddf214d5b 618 Pfam PF00145 C-5 cytosine-specific DNA methylase 360 540 3.6E-8 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 Vc3S01_p20073 3f826df3b3ef30237e58630ddf214d5b 618 SUPERFAMILY SSF53335 281 604 3.27E-21 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Vc3S01_2867 d73dac41798a772730855773585c6098 126 SUPERFAMILY SSF110069 5 126 5.76E-46 T 12-10-2018 IPR036767 ApaG domain superfamily Vc3S01_2867 d73dac41798a772730855773585c6098 126 Gene3D G3DSA:2.60.40.1470 1 126 1.7E-45 T 12-10-2018 IPR036767 ApaG domain superfamily Vc3S01_2867 d73dac41798a772730855773585c6098 126 Pfam PF04379 ApaG domain 18 101 1.8E-32 T 12-10-2018 IPR007474 ApaG domain Vc3S01_2867 d73dac41798a772730855773585c6098 126 Hamap MF_00791 Protein ApaG [apaG]. 1 126 31.196 T 12-10-2018 IPR023065 Uncharacterised protein family ApaG Vc3S01_A1277 ef86d6ac3a4e74d3e20f46110e9f462d 718 Gene3D G3DSA:2.170.130.10 35 165 2.4E-29 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Vc3S01_A1277 ef86d6ac3a4e74d3e20f46110e9f462d 718 Gene3D G3DSA:2.40.170.20 174 715 2.4E-38 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Vc3S01_A1277 ef86d6ac3a4e74d3e20f46110e9f462d 718 SUPERFAMILY SSF56935 41 715 1.73E-83 T 12-10-2018 Vc3S01_A1277 ef86d6ac3a4e74d3e20f46110e9f462d 718 Pfam PF00593 TonB dependent receptor 296 713 3.0E-22 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Vc3S01_A1277 ef86d6ac3a4e74d3e20f46110e9f462d 718 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 160 2.1E-20 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain Vc3S01_A0715 ba09b5181dcc0237aa8bf4dabc4528c7 217 Pfam PF04337 Protein of unknown function, DUF480 5 158 9.0E-66 T 12-10-2018 IPR007432 Protein of unknown function DUF480 Vc3S01_A0715 ba09b5181dcc0237aa8bf4dabc4528c7 217 SUPERFAMILY SSF46785 90 174 6.67E-29 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A0715 ba09b5181dcc0237aa8bf4dabc4528c7 217 Gene3D G3DSA:1.10.10.10 95 175 1.4E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A0715 ba09b5181dcc0237aa8bf4dabc4528c7 217 SUPERFAMILY SSF46785 2 84 7.07E-32 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A0715 ba09b5181dcc0237aa8bf4dabc4528c7 217 Hamap MF_01584 UPF0502 protein YceH [yceH]. 5 217 35.726 T 12-10-2018 IPR007432 Protein of unknown function DUF480 Vc3S01_A0715 ba09b5181dcc0237aa8bf4dabc4528c7 217 Gene3D G3DSA:1.10.10.10 1 90 9.8E-37 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_1885 864f5c13e9ac2efc81d6e513646a3a46 92 Pfam PF01042 Endoribonuclease L-PSP 7 87 4.3E-15 T 12-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 Vc3S01_1885 864f5c13e9ac2efc81d6e513646a3a46 92 Gene3D G3DSA:3.30.1330.40 1 90 5.4E-18 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Vc3S01_1885 864f5c13e9ac2efc81d6e513646a3a46 92 SUPERFAMILY SSF55298 7 88 8.01E-18 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Vc3S01_1895 1b21b53556f0af638a7c55ee5e006715 337 TIGRFAM TIGR01227 hutG: formimidoylglutamase 13 327 4.0E-114 T 12-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 Vc3S01_1895 1b21b53556f0af638a7c55ee5e006715 337 PRINTS PR00116 Arginase signature 125 140 3.8E-5 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 Vc3S01_1895 1b21b53556f0af638a7c55ee5e006715 337 PRINTS PR00116 Arginase signature 252 281 3.8E-5 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 Vc3S01_1895 1b21b53556f0af638a7c55ee5e006715 337 Gene3D G3DSA:3.40.800.10 5 336 2.6E-130 T 12-10-2018 Vc3S01_1895 1b21b53556f0af638a7c55ee5e006715 337 ProSitePatterns PS01053 Arginase family signature. 255 276 - T 12-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 Vc3S01_1895 1b21b53556f0af638a7c55ee5e006715 337 Pfam PF00491 Arginase family 47 325 7.6E-61 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 Vc3S01_1895 1b21b53556f0af638a7c55ee5e006715 337 PIRSF PIRSF036979 26 333 7.8E-26 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 Vc3S01_1895 1b21b53556f0af638a7c55ee5e006715 337 SUPERFAMILY SSF52768 13 332 1.01E-83 T 12-10-2018 IPR023696 Ureohydrolase domain superfamily Vc3S01_1895 1b21b53556f0af638a7c55ee5e006715 337 Hamap MF_00737 Formimidoylglutamase [hutG]. 8 327 42.742 T 12-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 Vc3S01_0619 ddaaf6c2f41fa4612c095de5d5b1435d 334 Pfam PF13609 Gram-negative porin 10 298 3.0E-24 T 12-10-2018 Vc3S01_0619 ddaaf6c2f41fa4612c095de5d5b1435d 334 Gene3D G3DSA:2.40.160.10 22 334 8.6E-61 T 12-10-2018 IPR023614 Porin domain superfamily Vc3S01_0619 ddaaf6c2f41fa4612c095de5d5b1435d 334 SUPERFAMILY SSF56935 22 334 1.13E-51 T 12-10-2018 Vc3S01_0650 5353d79315142c0e505a94043c40eca1 427 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 201 420 2.0E-74 T 12-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 Vc3S01_0650 5353d79315142c0e505a94043c40eca1 427 Pfam PF07670 Nucleoside recognition 99 195 6.9E-8 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 Vc3S01_0650 5353d79315142c0e505a94043c40eca1 427 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 1.3E-26 T 12-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 Vc3S01_0650 5353d79315142c0e505a94043c40eca1 427 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 5 420 1.1E-155 T 12-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 Vc3S01_1843 077e7f889c8e7d21d5f17a37ef222280 268 Pfam PF02654 Cobalamin-5-phosphate synthase 25 259 4.7E-53 T 12-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 Vc3S01_1843 077e7f889c8e7d21d5f17a37ef222280 268 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 22 261 4.0E-36 T 12-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 Vc3S01_1843 077e7f889c8e7d21d5f17a37ef222280 268 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 268 47.963 T 12-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 Vc3S01_A1370 32a2eb9aca758b58be7f13732a14bb67 289 SUPERFAMILY SSF81345 10 284 9.94E-61 T 12-10-2018 IPR037294 ABC transporter, BtuC-like Vc3S01_A1370 32a2eb9aca758b58be7f13732a14bb67 289 Pfam PF01032 FecCD transport family 8 284 8.1E-62 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Vc3S01_A1370 32a2eb9aca758b58be7f13732a14bb67 289 Gene3D G3DSA:1.10.3470.10 1 289 7.9E-60 T 12-10-2018 IPR037294 ABC transporter, BtuC-like Vc3S01_0335 75ab96704cbd899c47e0a2b399f96a9f 153 Pfam PF13690 Chemotaxis phosphatase CheX 42 139 4.8E-22 T 12-10-2018 IPR028051 Chemotaxis phosphatase CheX-like domain Vc3S01_0335 75ab96704cbd899c47e0a2b399f96a9f 153 Gene3D G3DSA:3.40.1550.10 1 153 3.3E-46 T 12-10-2018 IPR028976 CheC-like superfamily Vc3S01_0335 75ab96704cbd899c47e0a2b399f96a9f 153 SUPERFAMILY SSF103039 1 153 1.83E-38 T 12-10-2018 IPR028976 CheC-like superfamily Vc3S01_2607 dd9e87b52446cce88ecc381cd8f927d3 442 Gene3D G3DSA:3.90.1150.10 15 435 1.1E-152 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Vc3S01_2607 dd9e87b52446cce88ecc381cd8f927d3 442 SUPERFAMILY SSF53383 7 438 2.68E-125 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Vc3S01_2607 dd9e87b52446cce88ecc381cd8f927d3 442 Gene3D G3DSA:3.40.640.10 48 326 1.1E-152 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Vc3S01_2607 dd9e87b52446cce88ecc381cd8f927d3 442 Pfam PF00202 Aminotransferase class-III 14 435 3.1E-107 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Vc3S01_2607 dd9e87b52446cce88ecc381cd8f927d3 442 PIRSF PIRSF000521 1 438 7.1E-35 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Vc3S01_2607 dd9e87b52446cce88ecc381cd8f927d3 442 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 237 274 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Vc3S01_0070 9bb40382fc89ced3b6d7a87d0da49911 279 SMART SM00342 196 278 3.9E-22 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_0070 9bb40382fc89ced3b6d7a87d0da49911 279 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 262 278 2.8E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Vc3S01_0070 9bb40382fc89ced3b6d7a87d0da49911 279 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 247 262 2.8E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Vc3S01_0070 9bb40382fc89ced3b6d7a87d0da49911 279 Pfam PF02311 AraC-like ligand binding domain 27 147 6.2E-21 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 Vc3S01_0070 9bb40382fc89ced3b6d7a87d0da49911 279 Gene3D G3DSA:1.10.10.60 180 279 2.8E-26 T 12-10-2018 Vc3S01_0070 9bb40382fc89ced3b6d7a87d0da49911 279 Pfam PF12833 Helix-turn-helix domain 205 278 7.0E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_0070 9bb40382fc89ced3b6d7a87d0da49911 279 SUPERFAMILY SSF46689 181 229 3.36E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_0070 9bb40382fc89ced3b6d7a87d0da49911 279 SUPERFAMILY SSF51215 37 147 1.31E-17 T 12-10-2018 IPR037923 Transcription regulator HTH-like Vc3S01_0070 9bb40382fc89ced3b6d7a87d0da49911 279 SUPERFAMILY SSF46689 232 277 8.06E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_1033 89fcd7d80f70d667a6e08c42bd9d86c1 138 Gene3D G3DSA:3.10.180.10 3 135 4.7E-50 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Vc3S01_1033 89fcd7d80f70d667a6e08c42bd9d86c1 138 SUPERFAMILY SSF54593 3 130 1.34E-35 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Vc3S01_1033 89fcd7d80f70d667a6e08c42bd9d86c1 138 ProSitePatterns PS00934 Glyoxalase I signature 1. 8 29 - T 12-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 Vc3S01_1033 89fcd7d80f70d667a6e08c42bd9d86c1 138 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 5 136 1.2E-68 T 12-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 Vc3S01_1033 89fcd7d80f70d667a6e08c42bd9d86c1 138 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 126 3.4E-23 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Vc3S01_0571 55e5785f8b6e0cf235e80f9389d44c09 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 67 8.1E-13 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Vc3S01_0571 55e5785f8b6e0cf235e80f9389d44c09 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 7.4E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Vc3S01_0571 55e5785f8b6e0cf235e80f9389d44c09 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 7.4E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Vc3S01_0571 55e5785f8b6e0cf235e80f9389d44c09 205 SUPERFAMILY SSF46689 8 84 8.48E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_0571 55e5785f8b6e0cf235e80f9389d44c09 205 Gene3D G3DSA:1.10.357.10 1 205 9.9E-89 T 12-10-2018 Vc3S01_0571 55e5785f8b6e0cf235e80f9389d44c09 205 SUPERFAMILY SSF48498 89 197 4.89E-10 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Vc3S01_0555 a5a5ec8de75ce593aa05bf34901584f9 247 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 1.1E-69 T 12-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Vc3S01_0555 a5a5ec8de75ce593aa05bf34901584f9 247 Gene3D G3DSA:3.40.1280.10 1 160 4.1E-67 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Vc3S01_0555 a5a5ec8de75ce593aa05bf34901584f9 247 SUPERFAMILY SSF75217 1 245 4.25E-102 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases Vc3S01_0555 a5a5ec8de75ce593aa05bf34901584f9 247 Gene3D G3DSA:1.10.1270.20 161 247 1.4E-34 T 12-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Vc3S01_0555 a5a5ec8de75ce593aa05bf34901584f9 247 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 247 117.645 T 12-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Vc3S01_0555 a5a5ec8de75ce593aa05bf34901584f9 247 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 234 2.9E-109 T 12-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Vc3S01_0555 a5a5ec8de75ce593aa05bf34901584f9 247 PIRSF PIRSF000386 1 246 2.8E-100 T 12-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Vc3S01_A0399 daba248ca09bcb092586575b7f66f384 457 Gene3D G3DSA:1.10.287.130 194 316 5.0E-12 T 12-10-2018 Vc3S01_A0399 daba248ca09bcb092586575b7f66f384 457 SUPERFAMILY SSF55874 310 441 9.17E-15 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_A0399 daba248ca09bcb092586575b7f66f384 457 Gene3D G3DSA:3.30.565.10 319 453 2.3E-12 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_A0399 daba248ca09bcb092586575b7f66f384 457 SUPERFAMILY SSF47384 240 319 3.73E-10 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Vc3S01_A0399 daba248ca09bcb092586575b7f66f384 457 Pfam PF00512 His Kinase A (phospho-acceptor) domain 261 319 3.9E-8 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_A0399 daba248ca09bcb092586575b7f66f384 457 SMART SM00388 257 320 4.1E-8 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_0861 8b84c9ad10e62aa5491881cd257702d5 348 SUPERFAMILY SSF101801 247 322 5.49E-14 T 12-10-2018 IPR036429 SpoA-like superfamily Vc3S01_0861 8b84c9ad10e62aa5491881cd257702d5 348 Gene3D G3DSA:3.40.1550.10 43 230 1.3E-55 T 12-10-2018 IPR028976 CheC-like superfamily Vc3S01_0861 8b84c9ad10e62aa5491881cd257702d5 348 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 3 320 3.0E-124 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Vc3S01_0861 8b84c9ad10e62aa5491881cd257702d5 348 PRINTS PR00955 Flagellar motor switch protein FliM signature 2 15 9.9E-19 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Vc3S01_0861 8b84c9ad10e62aa5491881cd257702d5 348 PRINTS PR00955 Flagellar motor switch protein FliM signature 88 104 9.9E-19 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Vc3S01_0861 8b84c9ad10e62aa5491881cd257702d5 348 PRINTS PR00955 Flagellar motor switch protein FliM signature 113 132 9.9E-19 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Vc3S01_0861 8b84c9ad10e62aa5491881cd257702d5 348 PRINTS PR00955 Flagellar motor switch protein FliM signature 211 229 9.9E-19 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Vc3S01_0861 8b84c9ad10e62aa5491881cd257702d5 348 PIRSF PIRSF002888 1 328 7.9E-93 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Vc3S01_0861 8b84c9ad10e62aa5491881cd257702d5 348 Pfam PF02154 Flagellar motor switch protein FliM 37 229 2.2E-83 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Vc3S01_0861 8b84c9ad10e62aa5491881cd257702d5 348 SUPERFAMILY SSF103039 4 230 5.49E-21 T 12-10-2018 IPR028976 CheC-like superfamily Vc3S01_0861 8b84c9ad10e62aa5491881cd257702d5 348 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 250 319 2.4E-17 T 12-10-2018 IPR001543 Surface presentation of antigen (SpoA) Vc3S01_1435 4f663a9472765a2d3015c45195afc94f 513 Pfam PF03924 CHASE domain 84 270 2.3E-23 T 12-10-2018 IPR006189 CHASE domain Vc3S01_1435 4f663a9472765a2d3015c45195afc94f 513 Gene3D G3DSA:3.30.450.350 84 297 2.0E-5 T 12-10-2018 Vc3S01_1435 4f663a9472765a2d3015c45195afc94f 513 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 353 510 5.6E-32 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_1435 4f663a9472765a2d3015c45195afc94f 513 SUPERFAMILY SSF55073 362 511 5.49E-37 T 12-10-2018 IPR029787 Nucleotide cyclase Vc3S01_1435 4f663a9472765a2d3015c45195afc94f 513 Pfam PF00990 Diguanylate cyclase, GGDEF domain 357 507 2.1E-32 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_1435 4f663a9472765a2d3015c45195afc94f 513 Gene3D G3DSA:3.30.70.270 351 512 5.2E-42 T 12-10-2018 Vc3S01_1435 4f663a9472765a2d3015c45195afc94f 513 SMART SM01079 75 274 2.1E-28 T 12-10-2018 IPR006189 CHASE domain Vc3S01_1435 4f663a9472765a2d3015c45195afc94f 513 SMART SM00267 346 512 6.1E-37 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_2966 91ec20469b9c2d1147d8f144572f2d05 299 SUPERFAMILY SSF53448 1 217 9.09E-43 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Vc3S01_2966 91ec20469b9c2d1147d8f144572f2d05 299 Pfam PF00535 Glycosyl transferase family 2 3 119 4.1E-22 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Vc3S01_2966 91ec20469b9c2d1147d8f144572f2d05 299 Gene3D G3DSA:3.90.550.10 1 254 1.1E-41 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Vc3S01_1677 179eb8e504dfa27b28b3e6c012716d9d 202 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 89 100 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Vc3S01_1677 179eb8e504dfa27b28b3e6c012716d9d 202 Pfam PF13247 4Fe-4S dicluster domain 54 167 4.2E-10 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Vc3S01_1677 179eb8e504dfa27b28b3e6c012716d9d 202 Gene3D G3DSA:3.30.70.20 63 120 1.4E-33 T 12-10-2018 Vc3S01_1677 179eb8e504dfa27b28b3e6c012716d9d 202 SUPERFAMILY SSF54862 1 183 4.19E-48 T 12-10-2018 Vc3S01_1677 179eb8e504dfa27b28b3e6c012716d9d 202 Gene3D G3DSA:3.30.70.20 5 181 1.4E-33 T 12-10-2018 Vc3S01_A0497 0516df1f5b0a22d64dda1133f5154295 1196 Pfam PF14600 Cellulose-binding domain 445 498 1.3E-13 T 12-10-2018 IPR032798 Endoglucanase Z, cellulose-binding domain KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 Vc3S01_A0497 0516df1f5b0a22d64dda1133f5154295 1196 Gene3D G3DSA:2.60.40.10 249 341 9.7E-13 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_A0497 0516df1f5b0a22d64dda1133f5154295 1196 Gene3D G3DSA:2.60.40.10 149 239 3.7E-19 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_A0497 0516df1f5b0a22d64dda1133f5154295 1196 Gene3D G3DSA:2.60.40.10 343 439 6.7E-16 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_A0497 0516df1f5b0a22d64dda1133f5154295 1196 Gene3D G3DSA:2.10.10.20 445 498 1.1E-12 T 12-10-2018 Vc3S01_A0497 0516df1f5b0a22d64dda1133f5154295 1196 SMART SM00495 453 494 6.6E-5 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 Vc3S01_A0497 0516df1f5b0a22d64dda1133f5154295 1196 SUPERFAMILY SSF51055 447 498 1.59E-13 T 12-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 Vc3S01_A0989 9c1a30a89981ecaf06e28abcb8e2a128 84 Pfam PF04973 Nicotinamide mononucleotide transporter 9 77 5.9E-6 T 12-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 Vc3S01_1411 1f24d5df8cbc4bc92c53fcaa6a7d6ceb 514 TIGRFAM TIGR04040 glycyl_YjjI: glycine radical enzyme, YjjI family 11 502 9.8E-232 T 12-10-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted Vc3S01_1411 1f24d5df8cbc4bc92c53fcaa6a7d6ceb 514 PIRSF PIRSF028991 5 514 1.1E-286 T 12-10-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted Vc3S01_1411 1f24d5df8cbc4bc92c53fcaa6a7d6ceb 514 SUPERFAMILY SSF51998 18 468 3.36E-99 T 12-10-2018 Vc3S01_1411 1f24d5df8cbc4bc92c53fcaa6a7d6ceb 514 Pfam PF11230 Protein of unknown function (DUF3029) 21 502 1.7E-229 T 12-10-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted Vc3S01_A0031 874624dc760dbb63927a73d22ae388ae 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 9.1E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A0031 874624dc760dbb63927a73d22ae388ae 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 9.1E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A0031 874624dc760dbb63927a73d22ae388ae 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 9.1E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A0031 874624dc760dbb63927a73d22ae388ae 256 Gene3D G3DSA:3.40.50.720 4 254 1.6E-66 T 12-10-2018 Vc3S01_A0031 874624dc760dbb63927a73d22ae388ae 256 SUPERFAMILY SSF51735 7 253 2.51E-69 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_A0031 874624dc760dbb63927a73d22ae388ae 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 251 6.4E-50 T 12-10-2018 Vc3S01_A0031 874624dc760dbb63927a73d22ae388ae 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 3.9E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A0031 874624dc760dbb63927a73d22ae388ae 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 3.9E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A0031 874624dc760dbb63927a73d22ae388ae 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 3.9E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A0031 874624dc760dbb63927a73d22ae388ae 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 3.9E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A0031 874624dc760dbb63927a73d22ae388ae 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 3.9E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A0031 874624dc760dbb63927a73d22ae388ae 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 3.9E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_0415 d20d2235a4e5b1354227943e7bbdbaa1 95 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 1.4E-33 T 12-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 Vc3S01_0415 d20d2235a4e5b1354227943e7bbdbaa1 95 Gene3D G3DSA:3.30.160.100 1 95 1.5E-38 T 12-10-2018 IPR036567 Ribosome hibernation promotion factor-like Vc3S01_0415 d20d2235a4e5b1354227943e7bbdbaa1 95 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 93 3.5E-28 T 12-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 Vc3S01_0415 d20d2235a4e5b1354227943e7bbdbaa1 95 SUPERFAMILY SSF69754 1 95 1.7E-34 T 12-10-2018 IPR036567 Ribosome hibernation promotion factor-like Vc3S01_0602 b901c1a74199b7bb7725b07da3814ff5 341 Gene3D G3DSA:1.10.3720.10 94 303 3.2E-15 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_0602 b901c1a74199b7bb7725b07da3814ff5 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 122 305 1.7E-19 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Vc3S01_0602 b901c1a74199b7bb7725b07da3814ff5 341 SUPERFAMILY SSF161098 96 288 1.7E-19 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_A0099 76f6183628f5eb5f65c6506fb2f274d9 364 Gene3D G3DSA:3.40.50.300 1 238 8.5E-78 T 12-10-2018 Vc3S01_A0099 76f6183628f5eb5f65c6506fb2f274d9 364 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_A0099 76f6183628f5eb5f65c6506fb2f274d9 364 Pfam PF00005 ABC transporter 20 161 2.7E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_A0099 76f6183628f5eb5f65c6506fb2f274d9 364 SUPERFAMILY SSF50331 237 359 9.23E-16 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Vc3S01_A0099 76f6183628f5eb5f65c6506fb2f274d9 364 Gene3D G3DSA:2.40.50.140 283 346 9.7E-14 T 12-10-2018 Vc3S01_A0099 76f6183628f5eb5f65c6506fb2f274d9 364 Gene3D G3DSA:2.40.50.100 239 359 9.7E-14 T 12-10-2018 Vc3S01_A0099 76f6183628f5eb5f65c6506fb2f274d9 364 SMART SM00382 28 210 2.6E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_A0099 76f6183628f5eb5f65c6506fb2f274d9 364 SUPERFAMILY SSF52540 4 242 1.09E-85 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A1933 1f21184bd21796b715726d8a47707b5b 38 Gene3D G3DSA:3.10.180.10 1 37 7.0E-6 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Vc3S01_3174 9df328af9b993bccf986e10f43f84844 172 Hamap MF_00163 Peptide deformylase [def]. 2 162 31.003 T 12-10-2018 IPR023635 Peptide deformylase Vc3S01_3174 9df328af9b993bccf986e10f43f84844 172 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 159 1.5E-61 T 12-10-2018 IPR023635 Peptide deformylase Vc3S01_3174 9df328af9b993bccf986e10f43f84844 172 PIRSF PIRSF004749 1 172 9.4E-56 T 12-10-2018 IPR023635 Peptide deformylase Vc3S01_3174 9df328af9b993bccf986e10f43f84844 172 PRINTS PR01576 Peptide deformylase signature 120 149 2.7E-37 T 12-10-2018 IPR023635 Peptide deformylase Vc3S01_3174 9df328af9b993bccf986e10f43f84844 172 PRINTS PR01576 Peptide deformylase signature 33 62 2.7E-37 T 12-10-2018 IPR023635 Peptide deformylase Vc3S01_3174 9df328af9b993bccf986e10f43f84844 172 PRINTS PR01576 Peptide deformylase signature 101 119 2.7E-37 T 12-10-2018 IPR023635 Peptide deformylase Vc3S01_3174 9df328af9b993bccf986e10f43f84844 172 PRINTS PR01576 Peptide deformylase signature 89 100 2.7E-37 T 12-10-2018 IPR023635 Peptide deformylase Vc3S01_3174 9df328af9b993bccf986e10f43f84844 172 SUPERFAMILY SSF56420 3 165 1.05E-62 T 12-10-2018 IPR036821 Peptide deformylase superfamily Vc3S01_3174 9df328af9b993bccf986e10f43f84844 172 Pfam PF01327 Polypeptide deformylase 4 152 7.4E-51 T 12-10-2018 IPR023635 Peptide deformylase Vc3S01_3174 9df328af9b993bccf986e10f43f84844 172 Gene3D G3DSA:3.90.45.10 1 169 8.1E-67 T 12-10-2018 IPR036821 Peptide deformylase superfamily Vc3S01_0832 2e5c1ed0d91857784ab6c2ce99d32aac 116 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 112 2.3E-31 T 12-10-2018 IPR006504 Transcriptional regulator Spx/MgsR Vc3S01_0832 2e5c1ed0d91857784ab6c2ce99d32aac 116 Pfam PF03960 ArsC family 6 112 2.3E-19 T 12-10-2018 IPR006660 Arsenate reductase-like Vc3S01_0832 2e5c1ed0d91857784ab6c2ce99d32aac 116 SUPERFAMILY SSF52833 2 114 1.36E-35 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Vc3S01_0832 2e5c1ed0d91857784ab6c2ce99d32aac 116 Gene3D G3DSA:3.40.30.10 2 114 3.1E-42 T 12-10-2018 Vc3S01_2859 60b6f11a187ce5d28a11bbbb05438ac9 466 ProSitePatterns PS01244 Aconitase family signature 2. 399 412 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Vc3S01_2859 60b6f11a187ce5d28a11bbbb05438ac9 466 SUPERFAMILY SSF53732 1 465 2.49E-166 T 12-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 Vc3S01_2859 60b6f11a187ce5d28a11bbbb05438ac9 466 ProSitePatterns PS00450 Aconitase family signature 1. 339 355 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Vc3S01_2859 60b6f11a187ce5d28a11bbbb05438ac9 466 Gene3D G3DSA:3.30.499.20 4 286 5.9E-100 T 12-10-2018 Vc3S01_2859 60b6f11a187ce5d28a11bbbb05438ac9 466 Pfam PF00330 Aconitase family (aconitate hydratase) 7 457 7.8E-161 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Vc3S01_2859 60b6f11a187ce5d28a11bbbb05438ac9 466 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 466 60.849 T 12-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 Vc3S01_2859 60b6f11a187ce5d28a11bbbb05438ac9 466 PRINTS PR00415 Aconitase family signature 82 95 9.0E-51 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Vc3S01_2859 60b6f11a187ce5d28a11bbbb05438ac9 466 PRINTS PR00415 Aconitase family signature 286 300 9.0E-51 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Vc3S01_2859 60b6f11a187ce5d28a11bbbb05438ac9 466 PRINTS PR00415 Aconitase family signature 133 148 9.0E-51 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Vc3S01_2859 60b6f11a187ce5d28a11bbbb05438ac9 466 PRINTS PR00415 Aconitase family signature 209 222 9.0E-51 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Vc3S01_2859 60b6f11a187ce5d28a11bbbb05438ac9 466 PRINTS PR00415 Aconitase family signature 119 132 9.0E-51 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Vc3S01_2859 60b6f11a187ce5d28a11bbbb05438ac9 466 PRINTS PR00415 Aconitase family signature 108 116 9.0E-51 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Vc3S01_2859 60b6f11a187ce5d28a11bbbb05438ac9 466 PRINTS PR00415 Aconitase family signature 195 208 9.0E-51 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Vc3S01_2859 60b6f11a187ce5d28a11bbbb05438ac9 466 PRINTS PR00415 Aconitase family signature 399 412 9.0E-51 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Vc3S01_2859 60b6f11a187ce5d28a11bbbb05438ac9 466 PRINTS PR00415 Aconitase family signature 343 354 9.0E-51 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Vc3S01_2859 60b6f11a187ce5d28a11bbbb05438ac9 466 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 465 5.4E-267 T 12-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 Vc3S01_2859 60b6f11a187ce5d28a11bbbb05438ac9 466 Gene3D G3DSA:3.30.499.10 327 466 3.0E-49 T 12-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 Vc3S01_2172 c465f932940ee324c0cff3acbee3076f 148 SUPERFAMILY SSF69635 5 130 5.97E-20 T 12-10-2018 Vc3S01_2172 c465f932940ee324c0cff3acbee3076f 148 Gene3D G3DSA:3.30.1460.10 1 131 5.6E-26 T 12-10-2018 Vc3S01_2172 c465f932940ee324c0cff3acbee3076f 148 Pfam PF05932 Tir chaperone protein (CesT) family 11 124 2.8E-12 T 12-10-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 Vc3S01_p20005 62ec8efddd173b21422b265cdd783af6 234 ProSitePatterns PS00093 N-4 cytosine-specific DNA methylases signature. 23 28 - T 12-10-2018 IPR017985 DNA methylase, N-4 cytosine-specific, conserved site GO:0003677|GO:0015667|GO:0090124 Vc3S01_p20005 62ec8efddd173b21422b265cdd783af6 234 SUPERFAMILY SSF53335 12 178 6.91E-22 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Vc3S01_p20005 62ec8efddd173b21422b265cdd783af6 234 Pfam PF01555 DNA methylase 19 163 1.4E-15 T 12-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 Vc3S01_p20005 62ec8efddd173b21422b265cdd783af6 234 Gene3D G3DSA:3.40.50.150 6 211 4.9E-23 T 12-10-2018 Vc3S01_1462 8c9dd171ca16388f51db3dc85f673f5b 532 Gene3D G3DSA:2.30.42.10 142 247 3.0E-69 T 12-10-2018 Vc3S01_1462 8c9dd171ca16388f51db3dc85f673f5b 532 Pfam PF03572 Peptidase family S41 263 413 9.1E-20 T 12-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 Vc3S01_1462 8c9dd171ca16388f51db3dc85f673f5b 532 Gene3D G3DSA:3.90.226.10 248 486 3.0E-69 T 12-10-2018 Vc3S01_1462 8c9dd171ca16388f51db3dc85f673f5b 532 SUPERFAMILY SSF50156 152 242 1.17E-7 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 Vc3S01_1462 8c9dd171ca16388f51db3dc85f673f5b 532 Gene3D G3DSA:3.30.750.170 93 438 3.0E-69 T 12-10-2018 Vc3S01_1462 8c9dd171ca16388f51db3dc85f673f5b 532 SUPERFAMILY SSF52096 139 448 5.8E-29 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Vc3S01_1462 8c9dd171ca16388f51db3dc85f673f5b 532 SMART SM00245 234 450 0.0074 T 12-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 Vc3S01_0402 da934f1f2bd6c94abca55389d2085ef9 273 Pfam PF00795 Carbon-nitrogen hydrolase 3 256 4.6E-55 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Vc3S01_0402 da934f1f2bd6c94abca55389d2085ef9 273 Gene3D G3DSA:3.60.110.10 1 268 1.4E-91 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Vc3S01_0402 da934f1f2bd6c94abca55389d2085ef9 273 SUPERFAMILY SSF56317 3 263 1.96E-83 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Vc3S01_0402 da934f1f2bd6c94abca55389d2085ef9 273 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 149 169 - T 12-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site Vc3S01_A1099 655e16b4a0c325ace4d47305c590ad6c 712 Pfam PF07715 TonB-dependent Receptor Plug Domain 42 152 2.5E-24 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain Vc3S01_A1099 655e16b4a0c325ace4d47305c590ad6c 712 Gene3D G3DSA:2.170.130.10 38 167 1.3E-35 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Vc3S01_A1099 655e16b4a0c325ace4d47305c590ad6c 712 Pfam PF00593 TonB dependent receptor 244 710 3.4E-63 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Vc3S01_A1099 655e16b4a0c325ace4d47305c590ad6c 712 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 28 712 8.9E-182 T 12-10-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0015232|GO:0015886|GO:0019867 Vc3S01_A1099 655e16b4a0c325ace4d47305c590ad6c 712 Gene3D G3DSA:2.40.170.20 168 712 1.0E-116 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Vc3S01_A1099 655e16b4a0c325ace4d47305c590ad6c 712 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 28 712 3.9E-190 T 12-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 Vc3S01_A1099 655e16b4a0c325ace4d47305c590ad6c 712 SUPERFAMILY SSF56935 19 712 2.05E-116 T 12-10-2018 Vc3S01_A0139 471da3033fd5d57b38cb5c1a59637948 109 Gene3D G3DSA:1.10.3730.20 1 109 1.0E-26 T 12-10-2018 Vc3S01_A0139 471da3033fd5d57b38cb5c1a59637948 109 SUPERFAMILY SSF103481 4 106 1.7E-15 T 12-10-2018 Vc3S01_A0139 471da3033fd5d57b38cb5c1a59637948 109 Pfam PF00893 Small Multidrug Resistance protein 1 94 7.6E-17 T 12-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 Vc3S01_A1476 36a70b21f0d7e86d6c38371c90b005fe 350 PIRSF PIRSF001361 1 350 5.1E-160 T 12-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 Vc3S01_A1476 36a70b21f0d7e86d6c38371c90b005fe 350 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 5 348 9.4E-169 T 12-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 Vc3S01_A1476 36a70b21f0d7e86d6c38371c90b005fe 350 Pfam PF00793 DAHP synthetase I family 38 337 3.1E-106 T 12-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Vc3S01_A1476 36a70b21f0d7e86d6c38371c90b005fe 350 Gene3D G3DSA:3.20.20.70 1 349 2.4E-164 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_A1476 36a70b21f0d7e86d6c38371c90b005fe 350 SUPERFAMILY SSF51569 6 347 6.59E-137 T 12-10-2018 Vc3S01_3149 7a81a3b1cd9ed7d36de06d74e524e22a 310 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 303 6.6E-40 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Vc3S01_3149 7a81a3b1cd9ed7d36de06d74e524e22a 310 Gene3D G3DSA:1.10.3720.10 69 299 4.1E-20 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_3149 7a81a3b1cd9ed7d36de06d74e524e22a 310 SUPERFAMILY SSF161098 75 287 1.09E-17 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_A0261 8f2f2263de94143d993b74a59e30d076 202 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 22 196 4.1E-30 T 12-10-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like Vc3S01_A0261 8f2f2263de94143d993b74a59e30d076 202 SUPERFAMILY SSF51197 11 198 2.01E-66 T 12-10-2018 Vc3S01_A0261 8f2f2263de94143d993b74a59e30d076 202 Gene3D G3DSA:2.60.120.590 7 201 1.2E-66 T 12-10-2018 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily Vc3S01_1485 d19b3c98a43d224c548631af0e0f6b24 250 SMART SM00862 15 90 9.2E-8 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Vc3S01_1485 d19b3c98a43d224c548631af0e0f6b24 250 Pfam PF00486 Transcriptional regulatory protein, C terminal 17 90 2.2E-11 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Vc3S01_1485 d19b3c98a43d224c548631af0e0f6b24 250 SUPERFAMILY SSF46894 4 91 3.12E-13 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Vc3S01_1485 d19b3c98a43d224c548631af0e0f6b24 250 Gene3D G3DSA:1.10.10.10 3 99 3.1E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A1567 2a04307fdbce7d360ea5568d05df0faf 348 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 3 207 2.2E-25 T 12-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) Vc3S01_A1567 2a04307fdbce7d360ea5568d05df0faf 348 SUPERFAMILY SSF56935 1 345 1.1E-52 T 12-10-2018 Vc3S01_A1567 2a04307fdbce7d360ea5568d05df0faf 348 Gene3D G3DSA:2.40.160.60 1 347 5.2E-63 T 12-10-2018 Vc3S01_A1891 91a3a93f0504bdefd807c90c678b0796 60 SUPERFAMILY SSF89447 1 47 2.62E-8 T 12-10-2018 IPR037914 SpoVT-AbrB domain superfamily Vc3S01_A1891 91a3a93f0504bdefd807c90c678b0796 60 Gene3D G3DSA:2.10.260.10 6 47 1.7E-6 T 12-10-2018 Vc3S01_A1891 91a3a93f0504bdefd807c90c678b0796 60 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 9 45 2.6E-6 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Vc3S01_A1891 91a3a93f0504bdefd807c90c678b0796 60 SMART SM00966 6 49 0.0023 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Vc3S01_0462 37c0343aec466d372ff5e6b962f97741 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 28.234 T 12-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 Vc3S01_0462 37c0343aec466d372ff5e6b962f97741 90 SUPERFAMILY SSF111148 1 89 1.57E-40 T 12-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 Vc3S01_0462 37c0343aec466d372ff5e6b962f97741 90 PIRSF PIRSF029827 1 90 1.6E-43 T 12-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 Vc3S01_0462 37c0343aec466d372ff5e6b962f97741 90 Gene3D G3DSA:1.10.3880.10 1 90 3.9E-39 T 12-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 Vc3S01_0462 37c0343aec466d372ff5e6b962f97741 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 76 6.0E-39 T 12-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 Vc3S01_0462 37c0343aec466d372ff5e6b962f97741 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 5.4E-42 T 12-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 Vc3S01_2136 b7c0d5b4c2c227eaa3d3c9bcf7799f4a 96 ProDom PD020116 PLASMID ACRG TYPE III G SECRETION REGULATOR LCRG LOCUS RESPONSE 2 96 2.0E-41 T 12-10-2018 IPR009863 Type III secretion protein, LcrG Vc3S01_2136 b7c0d5b4c2c227eaa3d3c9bcf7799f4a 96 TIGRFAM TIGR02573 LcrG_PcrG: type III secretion protein LcrG 2 96 9.9E-36 T 12-10-2018 IPR009863 Type III secretion protein, LcrG Vc3S01_2136 b7c0d5b4c2c227eaa3d3c9bcf7799f4a 96 Pfam PF07216 LcrG protein 1 96 1.4E-35 T 12-10-2018 IPR009863 Type III secretion protein, LcrG Vc3S01_A1293 177ff7624efc4c50b3db1cd05835ea31 582 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 4 582 1.3E-201 T 12-10-2018 IPR010272 Type VI secretion system, TssF-like Vc3S01_A1293 177ff7624efc4c50b3db1cd05835ea31 582 PIRSF PIRSF028304 2 582 1.4E-206 T 12-10-2018 IPR010272 Type VI secretion system, TssF-like Vc3S01_A1293 177ff7624efc4c50b3db1cd05835ea31 582 Pfam PF05947 Type VI secretion system, TssF 5 580 1.1E-186 T 12-10-2018 IPR010272 Type VI secretion system, TssF-like Vc3S01_A1439 5ef0e1dee519c64cdf48924c09857933 349 SUPERFAMILY SSF53474 38 347 4.05E-37 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_A1439 5ef0e1dee519c64cdf48924c09857933 349 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 46 237 2.4E-12 T 12-10-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 Vc3S01_A1439 5ef0e1dee519c64cdf48924c09857933 349 Gene3D G3DSA:3.40.50.1820 44 329 5.9E-79 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_A1439 5ef0e1dee519c64cdf48924c09857933 349 Gene3D G3DSA:1.10.10.800 175 272 5.9E-79 T 12-10-2018 Vc3S01_1259 020903fd668f04cf7880729350bfa6f4 213 Gene3D G3DSA:2.40.160.20 27 213 9.5E-10 T 12-10-2018 Vc3S01_1259 020903fd668f04cf7880729350bfa6f4 213 SUPERFAMILY SSF56925 34 176 4.97E-16 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel Vc3S01_1259 020903fd668f04cf7880729350bfa6f4 213 Pfam PF13505 Outer membrane protein beta-barrel domain 10 171 8.7E-14 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel Vc3S01_1628 7c8230185d0d40d61eac1d46759fe28e 598 Pfam PF00005 ABC transporter 376 524 1.4E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_1628 7c8230185d0d40d61eac1d46759fe28e 598 Pfam PF00664 ABC transporter transmembrane region 25 312 1.1E-29 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Vc3S01_1628 7c8230185d0d40d61eac1d46759fe28e 598 SUPERFAMILY SSF52540 355 591 2.82E-80 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_1628 7c8230185d0d40d61eac1d46759fe28e 598 Gene3D G3DSA:1.20.1560.10 1 344 9.8E-55 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Vc3S01_1628 7c8230185d0d40d61eac1d46759fe28e 598 SUPERFAMILY SSF90123 12 345 9.68E-57 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Vc3S01_1628 7c8230185d0d40d61eac1d46759fe28e 598 Gene3D G3DSA:3.40.50.300 352 597 7.4E-81 T 12-10-2018 Vc3S01_1628 7c8230185d0d40d61eac1d46759fe28e 598 SMART SM00382 385 572 2.2E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_1628 7c8230185d0d40d61eac1d46759fe28e 598 ProSitePatterns PS00211 ABC transporters family signature. 496 510 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_1523 6ad6e2c4fd5f593a1b672f737b528680 421 PIRSF PIRSF006066 3 421 4.6E-140 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Vc3S01_1523 6ad6e2c4fd5f593a1b672f737b528680 421 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 14 416 6.3E-124 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Vc3S01_1523 6ad6e2c4fd5f593a1b672f737b528680 421 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 9 410 4.8E-111 T 12-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Vc3S01_2842 463a460f883c4d0180b929769f758646 125 PIRSF PIRSF028299 3 125 1.2E-32 T 12-10-2018 IPR016879 Uncharacterised conserved protein UCP028299 Vc3S01_2842 463a460f883c4d0180b929769f758646 125 Pfam PF11777 Protein of unknown function (DUF3316) 5 117 2.7E-19 T 12-10-2018 IPR016879 Uncharacterised conserved protein UCP028299 Vc3S01_A2002 76c1ea3f349f8a8549366aef7fab71f4 395 Pfam PF03786 D-mannonate dehydratase (UxuA) 1 389 6.8E-156 T 12-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 Vc3S01_A2002 76c1ea3f349f8a8549366aef7fab71f4 395 Hamap MF_00106 Mannonate dehydratase [uxuA]. 1 395 222.518 T 12-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 Vc3S01_A2002 76c1ea3f349f8a8549366aef7fab71f4 395 Gene3D G3DSA:3.20.20.150 1 392 6.4E-146 T 12-10-2018 Vc3S01_A2002 76c1ea3f349f8a8549366aef7fab71f4 395 SUPERFAMILY SSF51658 1 384 4.71E-79 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily Vc3S01_A2002 76c1ea3f349f8a8549366aef7fab71f4 395 PIRSF PIRSF016049 1 394 9.1E-176 T 12-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 Vc3S01_A2002 76c1ea3f349f8a8549366aef7fab71f4 395 TIGRFAM TIGR00695 uxuA: mannonate dehydratase 1 394 2.3E-212 T 12-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 Vc3S01_A1838 a6875def87797feafa565c1712cc196a 77 Pfam PF01914 MarC family integral membrane protein 7 71 2.3E-10 T 12-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 Vc3S01_1455 2a37b4100d0e6d455eaa8a74690d28d9 283 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 2 276 1.3E-50 T 12-10-2018 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 Vc3S01_A1040 75046c6c1f894b115c6a182bc00089c8 306 SUPERFAMILY SSF161098 72 293 1.44E-41 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_A1040 75046c6c1f894b115c6a182bc00089c8 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 300 2.5E-19 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Vc3S01_A1040 75046c6c1f894b115c6a182bc00089c8 306 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 71 140 3.5E-16 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Vc3S01_A1040 75046c6c1f894b115c6a182bc00089c8 306 Gene3D G3DSA:1.10.3720.10 68 304 4.3E-52 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_1207 ae17f8619287889bbf5414f5318dce6c 236 SUPERFAMILY SSF51120 9 95 1.57E-18 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal Vc3S01_1207 ae17f8619287889bbf5414f5318dce6c 236 PRINTS PR00313 NodO calcium binding signature 79 87 2.7E-12 T 12-10-2018 Vc3S01_1207 ae17f8619287889bbf5414f5318dce6c 236 PRINTS PR00313 NodO calcium binding signature 124 133 2.7E-12 T 12-10-2018 Vc3S01_1207 ae17f8619287889bbf5414f5318dce6c 236 PRINTS PR00313 NodO calcium binding signature 70 78 2.7E-12 T 12-10-2018 Vc3S01_1207 ae17f8619287889bbf5414f5318dce6c 236 PRINTS PR00313 NodO calcium binding signature 58 69 2.7E-12 T 12-10-2018 Vc3S01_1207 ae17f8619287889bbf5414f5318dce6c 236 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 66 84 - T 12-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site Vc3S01_1207 ae17f8619287889bbf5414f5318dce6c 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 12 28 3.5 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 Vc3S01_1207 ae17f8619287889bbf5414f5318dce6c 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 55 68 0.2 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 Vc3S01_1207 ae17f8619287889bbf5414f5318dce6c 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 36 50 25.0 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 Vc3S01_1207 ae17f8619287889bbf5414f5318dce6c 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 99 113 0.31 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 Vc3S01_1207 ae17f8619287889bbf5414f5318dce6c 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 70 86 0.0021 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 Vc3S01_1207 ae17f8619287889bbf5414f5318dce6c 236 Gene3D G3DSA:2.150.10.10 87 223 1.2E-11 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal Vc3S01_1207 ae17f8619287889bbf5414f5318dce6c 236 SUPERFAMILY SSF51120 74 206 4.58E-18 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal Vc3S01_1207 ae17f8619287889bbf5414f5318dce6c 236 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 75 93 - T 12-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site Vc3S01_1207 ae17f8619287889bbf5414f5318dce6c 236 Gene3D G3DSA:2.150.10.10 29 86 6.3E-12 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal Vc3S01_1207 ae17f8619287889bbf5414f5318dce6c 236 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 57 75 - T 12-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site Vc3S01_0159 8846fb2d694f82c199f5fd678de0dbf0 164 Gene3D G3DSA:3.30.70.1730 1 124 5.4E-35 T 12-10-2018 Vc3S01_0159 8846fb2d694f82c199f5fd678de0dbf0 164 SUPERFAMILY SSF160369 4 159 5.89E-45 T 12-10-2018 Vc3S01_0159 8846fb2d694f82c199f5fd678de0dbf0 164 Pfam PF00466 Ribosomal protein L10 5 101 7.1E-27 T 12-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 Vc3S01_0159 8846fb2d694f82c199f5fd678de0dbf0 164 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 159 24.151 T 12-10-2018 IPR022973 Ribosomal protein L10 Vc3S01_A1553 258a72764ad40129b106886c387e9dda 175 SUPERFAMILY SSF103515 72 142 3.66E-6 T 12-10-2018 IPR036709 Autotransporter beta-domain superfamily Vc3S01_A1553 258a72764ad40129b106886c387e9dda 175 Gene3D G3DSA:2.40.128.130 59 144 3.1E-7 T 12-10-2018 IPR036709 Autotransporter beta-domain superfamily Vc3S01_A1553 258a72764ad40129b106886c387e9dda 175 Pfam PF03797 Autotransporter beta-domain 79 140 3.2E-6 T 12-10-2018 IPR005546 Autotransporter beta-domain Vc3S01_1050 2a042f94475552b7eb207bbe02cbc8b1 297 Pfam PF01933 Uncharacterised protein family UPF0052 9 283 1.9E-75 T 12-10-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 Vc3S01_1050 2a042f94475552b7eb207bbe02cbc8b1 297 Hamap MF_00973 Gluconeogenesis factor. 5 296 30.404 T 12-10-2018 IPR010119 Gluconeogenesis factor Vc3S01_1050 2a042f94475552b7eb207bbe02cbc8b1 297 SUPERFAMILY SSF142338 6 290 1.96E-82 T 12-10-2018 Vc3S01_1050 2a042f94475552b7eb207bbe02cbc8b1 297 Gene3D G3DSA:3.40.50.12300 4 297 5.4E-80 T 12-10-2018 IPR038136 Gluconeogenesis factor superfamily Vc3S01_1050 2a042f94475552b7eb207bbe02cbc8b1 297 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 9 275 1.0E-102 T 12-10-2018 IPR010119 Gluconeogenesis factor Vc3S01_p40018 a182905d2bb678c24146bd010f1beae0 206 SUPERFAMILY SSF52540 2 187 4.42E-19 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_p40018 a182905d2bb678c24146bd010f1beae0 206 Gene3D G3DSA:3.40.50.300 1 201 8.6E-24 T 12-10-2018 Vc3S01_3119 ee2506cf72c4c8a2dc9fc4ef2e91e298 452 Gene3D G3DSA:3.30.390.30 339 451 2.2E-47 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Vc3S01_3119 ee2506cf72c4c8a2dc9fc4ef2e91e298 452 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 4 451 4.3E-215 T 12-10-2018 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081|Reactome: R-HSA-2408550|Reactome: R-HSA-3299685|Reactome: R-HSA-499943|Reactome: R-HSA-5628897 Vc3S01_3119 ee2506cf72c4c8a2dc9fc4ef2e91e298 452 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 12-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 Vc3S01_3119 ee2506cf72c4c8a2dc9fc4ef2e91e298 452 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 5.2E-29 T 12-10-2018 Vc3S01_3119 ee2506cf72c4c8a2dc9fc4ef2e91e298 452 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 5.2E-29 T 12-10-2018 Vc3S01_3119 ee2506cf72c4c8a2dc9fc4ef2e91e298 452 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 5.2E-29 T 12-10-2018 Vc3S01_3119 ee2506cf72c4c8a2dc9fc4ef2e91e298 452 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 5.2E-29 T 12-10-2018 Vc3S01_3119 ee2506cf72c4c8a2dc9fc4ef2e91e298 452 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 5.2E-29 T 12-10-2018 Vc3S01_3119 ee2506cf72c4c8a2dc9fc4ef2e91e298 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 403 418 6.4E-64 T 12-10-2018 Vc3S01_3119 ee2506cf72c4c8a2dc9fc4ef2e91e298 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 336 357 6.4E-64 T 12-10-2018 Vc3S01_3119 ee2506cf72c4c8a2dc9fc4ef2e91e298 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 6.4E-64 T 12-10-2018 Vc3S01_3119 ee2506cf72c4c8a2dc9fc4ef2e91e298 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 425 445 6.4E-64 T 12-10-2018 Vc3S01_3119 ee2506cf72c4c8a2dc9fc4ef2e91e298 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 6.4E-64 T 12-10-2018 Vc3S01_3119 ee2506cf72c4c8a2dc9fc4ef2e91e298 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 6.4E-64 T 12-10-2018 Vc3S01_3119 ee2506cf72c4c8a2dc9fc4ef2e91e298 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 6.4E-64 T 12-10-2018 Vc3S01_3119 ee2506cf72c4c8a2dc9fc4ef2e91e298 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 6.4E-64 T 12-10-2018 Vc3S01_3119 ee2506cf72c4c8a2dc9fc4ef2e91e298 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 6.4E-64 T 12-10-2018 Vc3S01_3119 ee2506cf72c4c8a2dc9fc4ef2e91e298 452 SUPERFAMILY SSF55424 337 451 3.78E-35 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Vc3S01_3119 ee2506cf72c4c8a2dc9fc4ef2e91e298 452 Gene3D G3DSA:3.50.50.60 5 315 1.0E-126 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_3119 ee2506cf72c4c8a2dc9fc4ef2e91e298 452 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 319 3.0E-71 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Vc3S01_3119 ee2506cf72c4c8a2dc9fc4ef2e91e298 452 PIRSF PIRSF000350 1 445 1.3E-83 T 12-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 Vc3S01_3119 ee2506cf72c4c8a2dc9fc4ef2e91e298 452 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 340 450 7.3E-33 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Vc3S01_3119 ee2506cf72c4c8a2dc9fc4ef2e91e298 452 Gene3D G3DSA:3.50.50.60 144 261 1.0E-126 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_3119 ee2506cf72c4c8a2dc9fc4ef2e91e298 452 SUPERFAMILY SSF51905 1 365 1.4E-58 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_0645 916e35a85d5ed55bd738dbedc7ec260a 151 Gene3D G3DSA:3.40.630.30 3 149 5.2E-40 T 12-10-2018 Vc3S01_0645 916e35a85d5ed55bd738dbedc7ec260a 151 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 12 145 4.4E-38 T 12-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 Vc3S01_0645 916e35a85d5ed55bd738dbedc7ec260a 151 Pfam PF00583 Acetyltransferase (GNAT) family 17 121 1.4E-14 T 12-10-2018 IPR000182 GNAT domain Vc3S01_0645 916e35a85d5ed55bd738dbedc7ec260a 151 SUPERFAMILY SSF55729 2 147 1.1E-30 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_1772 8c4a0316b6194a0a6226a1115930d976 363 Gene3D G3DSA:3.60.60.10 22 359 1.4E-113 T 12-10-2018 Vc3S01_1772 8c4a0316b6194a0a6226a1115930d976 363 SUPERFAMILY SSF56235 22 354 1.0E-94 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Vc3S01_1772 8c4a0316b6194a0a6226a1115930d976 363 Pfam PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family 22 346 2.9E-71 T 12-10-2018 IPR029132 Choloylglycine hydrolase/NAAA C-terminal Vc3S01_A0146 33a1b8e74059dd8353b9bf45657aeeed 213 Pfam PF03922 OmpW family 24 213 3.0E-71 T 12-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 Vc3S01_A0146 33a1b8e74059dd8353b9bf45657aeeed 213 SUPERFAMILY SSF56925 23 213 6.54E-34 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel Vc3S01_A0146 33a1b8e74059dd8353b9bf45657aeeed 213 Gene3D G3DSA:2.40.160.20 22 213 8.5E-81 T 12-10-2018 Vc3S01_1842 778e8da7128ef36f5f0f840bc8844c53 182 Gene3D G3DSA:3.40.50.300 3 176 8.2E-57 T 12-10-2018 Vc3S01_1842 778e8da7128ef36f5f0f840bc8844c53 182 SUPERFAMILY SSF52540 4 176 3.02E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_1842 778e8da7128ef36f5f0f840bc8844c53 182 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 4 175 5.2E-57 T 12-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 Vc3S01_1842 778e8da7128ef36f5f0f840bc8844c53 182 PIRSF PIRSF006135 1 178 1.1E-50 T 12-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 Vc3S01_2093 e13238947025de9efa431aa0fa6ed580 472 TIGRFAM TIGR02967 guan_deamin: guanine deaminase 48 446 5.6E-191 T 12-10-2018 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|Reactome: R-HSA-74259 Vc3S01_2093 e13238947025de9efa431aa0fa6ed580 472 Gene3D G3DSA:2.30.40.10 27 444 1.4E-196 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Vc3S01_2093 e13238947025de9efa431aa0fa6ed580 472 SUPERFAMILY SSF51338 49 452 3.93E-12 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Vc3S01_2093 e13238947025de9efa431aa0fa6ed580 472 SUPERFAMILY SSF51556 90 393 3.72E-99 T 12-10-2018 IPR032466 Metal-dependent hydrolase Vc3S01_2093 e13238947025de9efa431aa0fa6ed580 472 Gene3D G3DSA:3.20.20.140 91 408 1.4E-196 T 12-10-2018 Vc3S01_2093 e13238947025de9efa431aa0fa6ed580 472 Pfam PF01979 Amidohydrolase family 88 448 1.7E-70 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Vc3S01_1634 9c71c399d8170aa5eaadfead8e1d5e2b 1613 SUPERFAMILY SSF53223 755 940 1.44E-25 T 12-10-2018 Vc3S01_1634 9c71c399d8170aa5eaadfead8e1d5e2b 1613 SUPERFAMILY SSF51735 945 1281 4.66E-28 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_1634 9c71c399d8170aa5eaadfead8e1d5e2b 1613 PIRSF PIRSF036761 1 1610 0.0 T 12-10-2018 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 Vc3S01_1634 9c71c399d8170aa5eaadfead8e1d5e2b 1613 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 76 1602 0.0 T 12-10-2018 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 Vc3S01_2256 06c212ba072a1b117937957b704619f2 644 PIRSF PIRSF000549 1 644 2.3E-289 T 12-10-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 Vc3S01_2256 06c212ba072a1b117937957b704619f2 644 Pfam PF06798 PrkA serine protein kinase C-terminal domain 383 636 3.0E-72 T 12-10-2018 IPR010650 PrkA C-terminal domain Vc3S01_2256 06c212ba072a1b117937957b704619f2 644 SMART SM00763 19 380 2.2E-221 T 12-10-2018 IPR013153 PrkA AAA domain Vc3S01_2256 06c212ba072a1b117937957b704619f2 644 Pfam PF08298 PrkA AAA domain 19 380 2.3E-176 T 12-10-2018 IPR013153 PrkA AAA domain Vc3S01_2256 06c212ba072a1b117937957b704619f2 644 SUPERFAMILY SSF52540 73 368 2.44E-18 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_1154 b0db80799727f2346dab78852cc2e5a1 327 TIGRFAM TIGR01586 yopT_cys_prot: cysteine protease domain, YopT-type 134 321 1.0E-29 T 12-10-2018 IPR006473 Peptidase C58, YopT-type domain GO:0004197|GO:0009405 Vc3S01_1154 b0db80799727f2346dab78852cc2e5a1 327 Pfam PF03543 Yersinia/Haemophilus virulence surface antigen 108 324 4.9E-41 T 12-10-2018 IPR006473 Peptidase C58, YopT-type domain GO:0004197|GO:0009405 Vc3S01_1154 b0db80799727f2346dab78852cc2e5a1 327 Gene3D G3DSA:3.90.70.20 128 297 2.7E-11 T 12-10-2018 Vc3S01_1154 b0db80799727f2346dab78852cc2e5a1 327 SUPERFAMILY SSF54001 137 308 1.67E-23 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Vc3S01_1154 b0db80799727f2346dab78852cc2e5a1 327 PRINTS PR01376 Yersinia/Haemophilus virulence surface antigen signature 68 87 4.0E-13 T 12-10-2018 IPR003951 Peptidase C58, Yersinia/Haemophilus virulence surface antigen GO:0004197 Vc3S01_1154 b0db80799727f2346dab78852cc2e5a1 327 PRINTS PR01376 Yersinia/Haemophilus virulence surface antigen signature 273 293 4.0E-13 T 12-10-2018 IPR003951 Peptidase C58, Yersinia/Haemophilus virulence surface antigen GO:0004197 Vc3S01_1154 b0db80799727f2346dab78852cc2e5a1 327 PRINTS PR01376 Yersinia/Haemophilus virulence surface antigen signature 165 191 4.0E-13 T 12-10-2018 IPR003951 Peptidase C58, Yersinia/Haemophilus virulence surface antigen GO:0004197 Vc3S01_A0095 db732cc1652a78d8bf9876d30039c6ad 415 SUPERFAMILY SSF53850 33 411 1.52E-62 T 12-10-2018 Vc3S01_A0095 db732cc1652a78d8bf9876d30039c6ad 415 Pfam PF13416 Bacterial extracellular solute-binding protein 46 346 1.3E-40 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein Vc3S01_A0095 db732cc1652a78d8bf9876d30039c6ad 415 Gene3D G3DSA:3.40.190.10 50 340 3.2E-74 T 12-10-2018 Vc3S01_A0095 db732cc1652a78d8bf9876d30039c6ad 415 Gene3D G3DSA:3.40.190.10 138 401 3.2E-74 T 12-10-2018 Vc3S01_0373 3782a3b947141ffdc26115ec43ba4921 373 Gene3D G3DSA:3.90.1150.10 9 371 6.9E-145 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Vc3S01_0373 3782a3b947141ffdc26115ec43ba4921 373 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 189 209 - T 12-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site Vc3S01_0373 3782a3b947141ffdc26115ec43ba4921 373 Gene3D G3DSA:3.40.640.10 22 269 6.9E-145 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Vc3S01_0373 3782a3b947141ffdc26115ec43ba4921 373 SUPERFAMILY SSF53383 9 371 1.32E-102 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Vc3S01_0373 3782a3b947141ffdc26115ec43ba4921 373 PIRSF PIRSF000524 5 373 5.0E-111 T 12-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 Vc3S01_0373 3782a3b947141ffdc26115ec43ba4921 373 Pfam PF00266 Aminotransferase class-V 13 340 1.0E-36 T 12-10-2018 IPR000192 Aminotransferase class V domain Vc3S01_A0484 ce5e0862111e637f0bd32b371fd81324 241 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 230 2.7E-53 T 12-10-2018 Vc3S01_A0484 ce5e0862111e637f0bd32b371fd81324 241 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 130 158 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Vc3S01_A0484 ce5e0862111e637f0bd32b371fd81324 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 162 3.0E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A0484 ce5e0862111e637f0bd32b371fd81324 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 123 131 3.0E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A0484 ce5e0862111e637f0bd32b371fd81324 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 69 80 3.0E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A0484 ce5e0862111e637f0bd32b371fd81324 241 SUPERFAMILY SSF51735 3 230 1.14E-65 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_A0484 ce5e0862111e637f0bd32b371fd81324 241 Gene3D G3DSA:3.40.50.720 1 238 1.8E-66 T 12-10-2018 Vc3S01_A0484 ce5e0862111e637f0bd32b371fd81324 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 193 213 7.2E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A0484 ce5e0862111e637f0bd32b371fd81324 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 117 133 7.2E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A0484 ce5e0862111e637f0bd32b371fd81324 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 7.2E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A0484 ce5e0862111e637f0bd32b371fd81324 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 69 80 7.2E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A0484 ce5e0862111e637f0bd32b371fd81324 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 143 162 7.2E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A0484 ce5e0862111e637f0bd32b371fd81324 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 181 7.2E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A0367 64834536612b28a1f5d5f1ebda0d3cc2 350 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 296 316 4.1E-8 T 12-10-2018 Vc3S01_A0367 64834536612b28a1f5d5f1ebda0d3cc2 350 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 276 295 4.1E-8 T 12-10-2018 Vc3S01_A0367 64834536612b28a1f5d5f1ebda0d3cc2 350 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 73 91 4.1E-8 T 12-10-2018 Vc3S01_A0367 64834536612b28a1f5d5f1ebda0d3cc2 350 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 229 255 4.1E-8 T 12-10-2018 Vc3S01_A0367 64834536612b28a1f5d5f1ebda0d3cc2 350 Gene3D G3DSA:3.30.1330.60 201 336 6.3E-30 T 12-10-2018 IPR036737 OmpA-like domain superfamily Vc3S01_A0367 64834536612b28a1f5d5f1ebda0d3cc2 350 Pfam PF00691 OmpA family 212 307 6.9E-20 T 12-10-2018 IPR006665 OmpA-like domain Vc3S01_A0367 64834536612b28a1f5d5f1ebda0d3cc2 350 Gene3D G3DSA:2.60.40.2540 53 200 2.1E-13 T 12-10-2018 Vc3S01_A0367 64834536612b28a1f5d5f1ebda0d3cc2 350 SUPERFAMILY SSF103088 188 312 3.27E-28 T 12-10-2018 IPR036737 OmpA-like domain superfamily Vc3S01_A0367 64834536612b28a1f5d5f1ebda0d3cc2 350 PRINTS PR01021 OMPA domain signature 243 258 4.4E-10 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Vc3S01_A0367 64834536612b28a1f5d5f1ebda0d3cc2 350 PRINTS PR01021 OMPA domain signature 258 274 4.4E-10 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Vc3S01_A0367 64834536612b28a1f5d5f1ebda0d3cc2 350 PRINTS PR01021 OMPA domain signature 212 234 4.4E-10 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Vc3S01_2921 756d9a7dbdd6c76983597e7873ac5986 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_2921 756d9a7dbdd6c76983597e7873ac5986 37 Pfam PF00444 Ribosomal protein L36 1 37 9.4E-19 T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_2921 756d9a7dbdd6c76983597e7873ac5986 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 17.137 T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_2921 756d9a7dbdd6c76983597e7873ac5986 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 4.0E-23 T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_2921 756d9a7dbdd6c76983597e7873ac5986 37 SUPERFAMILY SSF57840 1 37 1.02E-16 T 12-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_2921 756d9a7dbdd6c76983597e7873ac5986 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 37 3.0E-9 T 12-10-2018 Vc3S01_A0966 e1b0ca945741185a22a68ef22ca24be4 439 Gene3D G3DSA:3.10.450.350 161 265 4.1E-36 T 12-10-2018 Vc3S01_A0966 e1b0ca945741185a22a68ef22ca24be4 439 Pfam PF01551 Peptidase family M23 297 390 1.1E-29 T 12-10-2018 IPR016047 Peptidase M23 Vc3S01_A0966 e1b0ca945741185a22a68ef22ca24be4 439 Gene3D G3DSA:3.10.450.350 68 160 9.9E-28 T 12-10-2018 Vc3S01_A0966 e1b0ca945741185a22a68ef22ca24be4 439 SUPERFAMILY SSF51261 144 392 3.3E-63 T 12-10-2018 IPR011055 Duplicated hybrid motif Vc3S01_A0966 e1b0ca945741185a22a68ef22ca24be4 439 Gene3D G3DSA:2.70.70.10 266 397 5.3E-52 T 12-10-2018 IPR011055 Duplicated hybrid motif Vc3S01_A1024 4dc0a08be2cec7366b9a37741167f57e 431 Gene3D G3DSA:3.40.640.10 47 298 9.0E-186 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Vc3S01_A1024 4dc0a08be2cec7366b9a37741167f57e 431 Pfam PF00464 Serine hydroxymethyltransferase 19 395 1.6E-174 T 12-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Vc3S01_A1024 4dc0a08be2cec7366b9a37741167f57e 431 Gene3D G3DSA:3.90.1150.10 21 403 9.0E-186 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Vc3S01_A1024 4dc0a08be2cec7366b9a37741167f57e 431 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 17 431 53.037 T 12-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Vc3S01_A1024 4dc0a08be2cec7366b9a37741167f57e 431 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 232 248 - T 12-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Vc3S01_A1024 4dc0a08be2cec7366b9a37741167f57e 431 SUPERFAMILY SSF53383 9 430 4.81E-181 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Vc3S01_A1024 4dc0a08be2cec7366b9a37741167f57e 431 PIRSF PIRSF000412 4 431 3.2E-167 T 12-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Vc3S01_A1134 b6a617e6934b9155519390e9a34558fd 156 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 2 152 6.6E-61 T 12-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 Vc3S01_A1134 b6a617e6934b9155519390e9a34558fd 156 SUPERFAMILY SSF102114 23 125 2.88E-8 T 12-10-2018 Vc3S01_A1134 b6a617e6934b9155519390e9a34558fd 156 Gene3D G3DSA:3.20.20.70 2 156 1.4E-22 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_A1134 b6a617e6934b9155519390e9a34558fd 156 ProSitePatterns PS01087 Radical activating enzymes signature. 14 35 - T 12-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 Vc3S01_A1134 b6a617e6934b9155519390e9a34558fd 156 Pfam PF13353 4Fe-4S single cluster domain 12 151 2.5E-51 T 12-10-2018 Vc3S01_A1134 b6a617e6934b9155519390e9a34558fd 156 PIRSF PIRSF000368 1 156 3.7E-59 T 12-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 Vc3S01_1245 660048880ef93fe5e17fd350a3115554 218 Gene3D G3DSA:3.60.15.10 3 213 1.7E-75 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Vc3S01_1245 660048880ef93fe5e17fd350a3115554 218 Pfam PF00753 Metallo-beta-lactamase superfamily 14 195 4.8E-28 T 12-10-2018 IPR001279 Metallo-beta-lactamase Vc3S01_1245 660048880ef93fe5e17fd350a3115554 218 SUPERFAMILY SSF56281 5 211 6.09E-53 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Vc3S01_1245 660048880ef93fe5e17fd350a3115554 218 SMART SM00849 14 195 3.7E-37 T 12-10-2018 IPR001279 Metallo-beta-lactamase Vc3S01_A1710 2cced44155a5340f6d942e39da985b66 442 Gene3D G3DSA:2.40.30.170 60 361 3.7E-32 T 12-10-2018 Vc3S01_A1710 2cced44155a5340f6d942e39da985b66 442 Gene3D G3DSA:2.40.50.100 66 252 3.7E-32 T 12-10-2018 Vc3S01_A1710 2cced44155a5340f6d942e39da985b66 442 SUPERFAMILY SSF111369 64 356 2.35E-7 T 12-10-2018 Vc3S01_A1710 2cced44155a5340f6d942e39da985b66 442 Gene3D G3DSA:2.40.420.20 362 424 3.7E-32 T 12-10-2018 Vc3S01_A1710 2cced44155a5340f6d942e39da985b66 442 Gene3D G3DSA:1.10.287.470 103 218 3.7E-32 T 12-10-2018 Vc3S01_p10003 0c6fac7aacd45e2f9a98c063f8910a1a 314 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 8 311 3.1E-52 T 12-10-2018 IPR010106 Recombination-promoting nuclease RpnA Vc3S01_p10003 0c6fac7aacd45e2f9a98c063f8910a1a 314 Pfam PF04754 Putative transposase, YhgA-like 8 206 2.4E-81 T 12-10-2018 IPR006842 Transposase (putative), YhgA-like Vc3S01_0135 12aa91e3c4534d609dbcea202ed011d2 466 Gene3D G3DSA:3.50.50.60 7 333 1.9E-92 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_0135 12aa91e3c4534d609dbcea202ed011d2 466 SUPERFAMILY SSF55424 344 463 1.89E-30 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Vc3S01_0135 12aa91e3c4534d609dbcea202ed011d2 466 SUPERFAMILY SSF51905 5 319 1.48E-57 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_0135 12aa91e3c4534d609dbcea202ed011d2 466 Gene3D G3DSA:3.30.390.30 345 464 1.8E-32 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Vc3S01_0135 12aa91e3c4534d609dbcea202ed011d2 466 Hamap MF_00247 Soluble pyridine nucleotide transhydrogenase [sthA]. 2 466 65.199 T 12-10-2018 IPR022962 Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0055114 KEGG: 00760+1.6.1.1|MetaCyc: PWY-5083 Vc3S01_0135 12aa91e3c4534d609dbcea202ed011d2 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 1.3E-28 T 12-10-2018 Vc3S01_0135 12aa91e3c4534d609dbcea202ed011d2 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 1.3E-28 T 12-10-2018 Vc3S01_0135 12aa91e3c4534d609dbcea202ed011d2 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 1.3E-28 T 12-10-2018 Vc3S01_0135 12aa91e3c4534d609dbcea202ed011d2 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 139 157 1.3E-28 T 12-10-2018 Vc3S01_0135 12aa91e3c4534d609dbcea202ed011d2 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 1.3E-28 T 12-10-2018 Vc3S01_0135 12aa91e3c4534d609dbcea202ed011d2 466 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 326 1.2E-58 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Vc3S01_0135 12aa91e3c4534d609dbcea202ed011d2 466 PIRSF PIRSF000350 1 463 5.4E-70 T 12-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 Vc3S01_0135 12aa91e3c4534d609dbcea202ed011d2 466 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 457 9.5E-30 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Vc3S01_0135 12aa91e3c4534d609dbcea202ed011d2 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 5.6E-52 T 12-10-2018 Vc3S01_0135 12aa91e3c4534d609dbcea202ed011d2 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 5.6E-52 T 12-10-2018 Vc3S01_0135 12aa91e3c4534d609dbcea202ed011d2 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 432 452 5.6E-52 T 12-10-2018 Vc3S01_0135 12aa91e3c4534d609dbcea202ed011d2 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 5.6E-52 T 12-10-2018 Vc3S01_0135 12aa91e3c4534d609dbcea202ed011d2 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 5.6E-52 T 12-10-2018 Vc3S01_0135 12aa91e3c4534d609dbcea202ed011d2 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 407 422 5.6E-52 T 12-10-2018 Vc3S01_0135 12aa91e3c4534d609dbcea202ed011d2 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 151 5.6E-52 T 12-10-2018 Vc3S01_0135 12aa91e3c4534d609dbcea202ed011d2 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 5.6E-52 T 12-10-2018 Vc3S01_0135 12aa91e3c4534d609dbcea202ed011d2 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 342 363 5.6E-52 T 12-10-2018 Vc3S01_0135 12aa91e3c4534d609dbcea202ed011d2 466 Gene3D G3DSA:3.50.50.60 158 276 1.9E-92 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_A1780 aedbd798b1b8bb63b96c69286a834753 139 SUPERFAMILY SSF54593 3 129 2.95E-29 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Vc3S01_A1780 aedbd798b1b8bb63b96c69286a834753 139 Gene3D G3DSA:3.10.180.10 2 131 8.5E-34 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Vc3S01_A1780 aedbd798b1b8bb63b96c69286a834753 139 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 125 1.2E-18 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Vc3S01_2809 8ba42e4d9a9cbaeea00070362322b994 476 Gene3D G3DSA:3.40.50.620 322 474 3.5E-37 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Vc3S01_2809 8ba42e4d9a9cbaeea00070362322b994 476 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 74 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 Vc3S01_2809 8ba42e4d9a9cbaeea00070362322b994 476 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 7 312 3.1E-127 T 12-10-2018 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 Vc3S01_2809 8ba42e4d9a9cbaeea00070362322b994 476 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 332 472 3.1E-61 T 12-10-2018 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 Vc3S01_2809 8ba42e4d9a9cbaeea00070362322b994 476 Gene3D G3DSA:3.40.1190.20 6 310 5.9E-112 T 12-10-2018 IPR029056 Ribokinase-like Vc3S01_2809 8ba42e4d9a9cbaeea00070362322b994 476 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 474 42.872 T 12-10-2018 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 Vc3S01_2809 8ba42e4d9a9cbaeea00070362322b994 476 SUPERFAMILY SSF52374 340 471 3.94E-23 T 12-10-2018 Vc3S01_2809 8ba42e4d9a9cbaeea00070362322b994 476 SUPERFAMILY SSF53613 12 303 4.68E-59 T 12-10-2018 IPR029056 Ribokinase-like Vc3S01_2809 8ba42e4d9a9cbaeea00070362322b994 476 Pfam PF01467 Cytidylyltransferase-like 345 468 3.1E-14 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Vc3S01_2809 8ba42e4d9a9cbaeea00070362322b994 476 Pfam PF00294 pfkB family carbohydrate kinase 13 303 2.4E-47 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB Vc3S01_2809 8ba42e4d9a9cbaeea00070362322b994 476 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 342 408 6.1E-18 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Vc3S01_2642 b1ba6a472ebb5025db32f762b2590a97 158 Hamap MF_01176 HTH-type transcriptional regulator IscR [iscR]. 1 158 46.151 T 12-10-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 Vc3S01_2642 b1ba6a472ebb5025db32f762b2590a97 158 Pfam PF02082 Transcriptional regulator 1 73 3.8E-22 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type Vc3S01_2642 b1ba6a472ebb5025db32f762b2590a97 158 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 120 8.7E-42 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type Vc3S01_2642 b1ba6a472ebb5025db32f762b2590a97 158 SUPERFAMILY SSF46785 1 123 1.2E-31 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_2642 b1ba6a472ebb5025db32f762b2590a97 158 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 39 57 - T 12-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site Vc3S01_2642 b1ba6a472ebb5025db32f762b2590a97 158 Gene3D G3DSA:1.10.10.10 1 134 7.1E-48 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_1016 bd6fcd03945594429ce54ee168c51000 255 Gene3D G3DSA:2.60.40.2500 130 254 9.0E-35 T 12-10-2018 IPR038161 VirB9/CagX/TrbG, C-terminal domain superfamily Vc3S01_1016 bd6fcd03945594429ce54ee168c51000 255 Pfam PF03524 Conjugal transfer protein 31 226 1.0E-53 T 12-10-2018 IPR010258 Conjugal transfer, TrbG/VirB9/CagX Vc3S01_2548 e3f0d51f16d26f863bea6bf3eb0837bd 518 SMART SM00267 348 518 1.6E-35 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_2548 e3f0d51f16d26f863bea6bf3eb0837bd 518 Gene3D G3DSA:3.30.70.270 345 518 2.2E-41 T 12-10-2018 Vc3S01_2548 e3f0d51f16d26f863bea6bf3eb0837bd 518 SUPERFAMILY SSF55073 363 516 2.51E-35 T 12-10-2018 IPR029787 Nucleotide cyclase Vc3S01_2548 e3f0d51f16d26f863bea6bf3eb0837bd 518 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 358 516 4.4E-36 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_2548 e3f0d51f16d26f863bea6bf3eb0837bd 518 Pfam PF00990 Diguanylate cyclase, GGDEF domain 360 514 5.1E-35 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_3022 fba4328466b9e96005bd084f46a32452 285 SMART SM00382 35 244 3.7E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_3022 fba4328466b9e96005bd084f46a32452 285 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 275 3.8E-6 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Vc3S01_3022 fba4328466b9e96005bd084f46a32452 285 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_3022 fba4328466b9e96005bd084f46a32452 285 Gene3D G3DSA:3.40.50.300 4 282 4.1E-89 T 12-10-2018 Vc3S01_3022 fba4328466b9e96005bd084f46a32452 285 Pfam PF00005 ABC transporter 26 186 1.8E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_3022 fba4328466b9e96005bd084f46a32452 285 SUPERFAMILY SSF52540 6 257 1.28E-67 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A0113 0fa2581be75a5346651c51a07f02e934 432 SUPERFAMILY SSF56935 67 432 1.51E-92 T 12-10-2018 Vc3S01_A0113 0fa2581be75a5346651c51a07f02e934 432 Gene3D G3DSA:2.40.170.10 66 432 4.4E-71 T 12-10-2018 IPR036998 Porin, LamB-type superfamily GO:0015288|GO:0016020|GO:0034219 Vc3S01_A0113 0fa2581be75a5346651c51a07f02e934 432 Pfam PF02264 LamB porin 68 432 8.9E-77 T 12-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 Vc3S01_A0113 0fa2581be75a5346651c51a07f02e934 432 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 98 403 4.0E-49 T 12-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 Vc3S01_A2027 dafa82283d0ed595ec1cbfb3fa6c7bd1 176 Gene3D G3DSA:3.40.630.30 1 175 2.5E-39 T 12-10-2018 Vc3S01_A2027 dafa82283d0ed595ec1cbfb3fa6c7bd1 176 SUPERFAMILY SSF55729 2 174 1.02E-37 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_A2027 dafa82283d0ed595ec1cbfb3fa6c7bd1 176 Pfam PF13302 Acetyltransferase (GNAT) domain 5 148 4.1E-22 T 12-10-2018 IPR000182 GNAT domain Vc3S01_3034 aa5786e3bf1f603ececde4a6f8a5238f 90 SMART SM01409 8 61 1.9E-16 T 12-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Vc3S01_3034 aa5786e3bf1f603ececde4a6f8a5238f 90 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 1.5E-29 T 12-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Vc3S01_3034 aa5786e3bf1f603ececde4a6f8a5238f 90 SUPERFAMILY SSF63562 1 78 5.1E-26 T 12-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Vc3S01_3034 aa5786e3bf1f603ececde4a6f8a5238f 90 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 16.947 T 12-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Vc3S01_3034 aa5786e3bf1f603ececde4a6f8a5238f 90 Pfam PF01192 RNA polymerase Rpb6 10 60 1.1E-17 T 12-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Vc3S01_3034 aa5786e3bf1f603ececde4a6f8a5238f 90 Gene3D G3DSA:3.90.940.10 1 90 6.2E-30 T 12-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Vc3S01_0431 562e9b63c7104be51f48cfab8527b774 153 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 7 97 1.7E-30 T 12-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal Vc3S01_0431 562e9b63c7104be51f48cfab8527b774 153 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 102 149 4.2E-19 T 12-10-2018 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal Vc3S01_0431 562e9b63c7104be51f48cfab8527b774 153 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 4 152 33.861 T 12-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 Vc3S01_0431 562e9b63c7104be51f48cfab8527b774 153 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 5 150 3.7E-61 T 12-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 Vc3S01_0431 562e9b63c7104be51f48cfab8527b774 153 SUPERFAMILY SSF54893 2 100 6.41E-36 T 12-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily Vc3S01_0431 562e9b63c7104be51f48cfab8527b774 153 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 9 99 1.0E-46 T 12-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal Vc3S01_0431 562e9b63c7104be51f48cfab8527b774 153 Gene3D G3DSA:2.30.30.20 101 153 1.4E-24 T 12-10-2018 Vc3S01_0431 562e9b63c7104be51f48cfab8527b774 153 Gene3D G3DSA:3.30.70.140 1 100 7.8E-37 T 12-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily Vc3S01_0431 562e9b63c7104be51f48cfab8527b774 153 SUPERFAMILY SSF57825 101 151 2.35E-16 T 12-10-2018 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily Vc3S01_A1769 d4352fa44f66ed0de89727cd47cb73d2 288 Pfam PF03466 LysR substrate binding domain 87 281 5.1E-14 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_A1769 d4352fa44f66ed0de89727cd47cb73d2 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.2E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A1769 d4352fa44f66ed0de89727cd47cb73d2 288 SUPERFAMILY SSF53850 90 284 1.19E-17 T 12-10-2018 Vc3S01_A1769 d4352fa44f66ed0de89727cd47cb73d2 288 Gene3D G3DSA:1.10.10.10 1 92 6.6E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A1769 d4352fa44f66ed0de89727cd47cb73d2 288 SUPERFAMILY SSF46785 3 81 1.81E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A1769 d4352fa44f66ed0de89727cd47cb73d2 288 Gene3D G3DSA:3.40.190.10 98 277 1.4E-38 T 12-10-2018 Vc3S01_A1769 d4352fa44f66ed0de89727cd47cb73d2 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 5.1E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A1769 d4352fa44f66ed0de89727cd47cb73d2 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 5.1E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A1769 d4352fa44f66ed0de89727cd47cb73d2 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 5.1E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A1769 d4352fa44f66ed0de89727cd47cb73d2 288 Gene3D G3DSA:3.40.190.10 158 251 1.4E-38 T 12-10-2018 Vc3S01_A1863 c50bf64eea2dffcb3a9312d7ca8ecffa 817 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 10 812 0.0 T 12-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Vc3S01_A1863 c50bf64eea2dffcb3a9312d7ca8ecffa 817 Gene3D G3DSA:3.40.50.2000 5 474 4.2E-194 T 12-10-2018 Vc3S01_A1863 c50bf64eea2dffcb3a9312d7ca8ecffa 817 SUPERFAMILY SSF53756 8 815 0.0 T 12-10-2018 Vc3S01_A1863 c50bf64eea2dffcb3a9312d7ca8ecffa 817 Pfam PF00343 Carbohydrate phosphorylase 99 812 0.0 T 12-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Vc3S01_A1863 c50bf64eea2dffcb3a9312d7ca8ecffa 817 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 656 668 - T 12-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Vc3S01_A1863 c50bf64eea2dffcb3a9312d7ca8ecffa 817 PIRSF PIRSF000460 1 817 2.4E-213 T 12-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Vc3S01_A1863 c50bf64eea2dffcb3a9312d7ca8ecffa 817 Gene3D G3DSA:3.40.50.2000 475 797 5.6E-139 T 12-10-2018 Vc3S01_A1415 cfc9955f099ce0276f504719bcc169f4 199 Hamap MF_00768 HTH-type transcriptional regulator BetI [betI]. 1 198 96.529 T 12-10-2018 IPR017757 Transcriptional repressor BetI Vc3S01_A1415 cfc9955f099ce0276f504719bcc169f4 199 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Vc3S01_A1415 cfc9955f099ce0276f504719bcc169f4 199 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 85 192 1.7E-31 T 12-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal Vc3S01_A1415 cfc9955f099ce0276f504719bcc169f4 199 SUPERFAMILY SSF46689 4 78 1.39E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_A1415 cfc9955f099ce0276f504719bcc169f4 199 TIGRFAM TIGR03384 betaine_BetI: transcriptional repressor BetI 2 192 3.4E-75 T 12-10-2018 IPR017757 Transcriptional repressor BetI Vc3S01_A1415 cfc9955f099ce0276f504719bcc169f4 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 59 1.6E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Vc3S01_A1415 cfc9955f099ce0276f504719bcc169f4 199 Gene3D G3DSA:1.10.357.10 5 197 2.6E-45 T 12-10-2018 Vc3S01_A1415 cfc9955f099ce0276f504719bcc169f4 199 SUPERFAMILY SSF48498 105 193 1.25E-15 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Vc3S01_0676 0c806bef247d8f6025c82dd46e9b4a32 149 Pfam PF07811 TadE-like protein 13 55 2.4E-9 T 12-10-2018 IPR012495 TadE-like Vc3S01_0001 94fe67f1ccd11fc5efc27747a904a30b 146 Gene3D G3DSA:3.40.50.360 1 144 1.8E-44 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Vc3S01_0001 94fe67f1ccd11fc5efc27747a904a30b 146 Pfam PF00258 Flavodoxin 4 136 3.0E-21 T 12-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 Vc3S01_0001 94fe67f1ccd11fc5efc27747a904a30b 146 SUPERFAMILY SSF52218 2 143 3.77E-38 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Vc3S01_A1698 6420f90684301de98dcb3c1448fde2bb 383 Gene3D G3DSA:3.40.50.300 172 372 3.2E-6 T 12-10-2018 Vc3S01_A1980 9b354c354cd4f6e4a6413217f6f87e45 215 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 14 191 8.9E-49 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal Vc3S01_A1980 9b354c354cd4f6e4a6413217f6f87e45 215 SMART SM01007 13 192 1.3E-61 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal Vc3S01_A1980 9b354c354cd4f6e4a6413217f6f87e45 215 SUPERFAMILY SSF53639 6 210 6.87E-63 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily Vc3S01_A1980 9b354c354cd4f6e4a6413217f6f87e45 215 Gene3D G3DSA:3.40.225.10 6 213 9.2E-62 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily Vc3S01_0813 cce3f7cef3067a03acebfcc994b82ac6 281 Gene3D G3DSA:3.60.20.10 1 258 2.0E-99 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Vc3S01_0813 cce3f7cef3067a03acebfcc994b82ac6 281 Pfam PF13230 Glutamine amidotransferases class-II 1 259 4.3E-114 T 12-10-2018 IPR026869 Putative glutamine amidotransferase type 2 Vc3S01_0813 cce3f7cef3067a03acebfcc994b82ac6 281 SUPERFAMILY SSF56235 2 253 1.63E-51 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Vc3S01_A1628 c8f8a2e6189f45c848dd8b606fabdb2b 380 SUPERFAMILY SSF56935 33 372 2.33E-21 T 12-10-2018 Vc3S01_A1628 c8f8a2e6189f45c848dd8b606fabdb2b 380 Gene3D G3DSA:2.40.160.10 29 373 5.1E-9 T 12-10-2018 IPR023614 Porin domain superfamily Vc3S01_A1067 45bfb31cff90590255c26dd89af9eaeb 544 Pfam PF11398 Protein of unknown function (DUF2813) 1 370 2.8E-144 T 12-10-2018 IPR022602 Protein of unknown function DUF2813 Vc3S01_A1067 45bfb31cff90590255c26dd89af9eaeb 544 Gene3D G3DSA:3.40.50.300 1 344 3.4E-15 T 12-10-2018 Vc3S01_A1067 45bfb31cff90590255c26dd89af9eaeb 544 SUPERFAMILY SSF52540 1 326 7.2E-18 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0385 7f2445c5be2ce104dfa948a8df8622c1 365 SMART SM00028 211 244 0.022 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_0385 7f2445c5be2ce104dfa948a8df8622c1 365 SMART SM00028 311 344 350.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_0385 7f2445c5be2ce104dfa948a8df8622c1 365 SMART SM00028 277 310 41.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_0385 7f2445c5be2ce104dfa948a8df8622c1 365 SMART SM00028 177 210 48.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_0385 7f2445c5be2ce104dfa948a8df8622c1 365 SUPERFAMILY SSF48452 177 338 2.01E-17 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_0385 7f2445c5be2ce104dfa948a8df8622c1 365 Gene3D G3DSA:1.25.40.10 275 363 2.2E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_0385 7f2445c5be2ce104dfa948a8df8622c1 365 Pfam PF14559 Tetratricopeptide repeat 187 236 9.7E-6 T 12-10-2018 Vc3S01_0385 7f2445c5be2ce104dfa948a8df8622c1 365 Gene3D G3DSA:1.25.40.10 143 270 3.3E-14 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_p20008 a8e8e84cfdb717a18466036e4958cc76 276 Gene3D G3DSA:1.10.443.10 92 266 1.9E-44 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Vc3S01_p20008 a8e8e84cfdb717a18466036e4958cc76 276 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 4 84 2.1E-11 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 Vc3S01_p20008 a8e8e84cfdb717a18466036e4958cc76 276 Pfam PF00589 Phage integrase family 100 260 4.6E-39 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Vc3S01_p20008 a8e8e84cfdb717a18466036e4958cc76 276 SUPERFAMILY SSF56349 4 263 1.27E-46 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Vc3S01_p20008 a8e8e84cfdb717a18466036e4958cc76 276 Gene3D G3DSA:1.10.150.130 2 90 1.4E-14 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal Vc3S01_0048 e96987fc032b6b0a38ab16bcf2b29e1b 175 SUPERFAMILY SSF52218 3 158 8.71E-32 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Vc3S01_0048 e96987fc032b6b0a38ab16bcf2b29e1b 175 Gene3D G3DSA:3.40.50.360 5 113 2.8E-12 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Vc3S01_0048 e96987fc032b6b0a38ab16bcf2b29e1b 175 Pfam PF12724 Flavodoxin domain 5 153 3.6E-51 T 12-10-2018 IPR026816 Flavodoxin domain Vc3S01_A0560 53c2424634d04353de7530aff306d508 289 Gene3D G3DSA:3.40.50.1980 149 289 9.2E-43 T 12-10-2018 Vc3S01_A0560 53c2424634d04353de7530aff306d508 289 Pfam PF01497 Periplasmic binding protein 35 264 1.1E-34 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain Vc3S01_A0560 53c2424634d04353de7530aff306d508 289 SUPERFAMILY SSF53807 33 289 1.53E-47 T 12-10-2018 Vc3S01_A0560 53c2424634d04353de7530aff306d508 289 Gene3D G3DSA:3.40.50.1980 29 148 1.6E-33 T 12-10-2018 Vc3S01_A1537 161f0fc327aedadac0d5ae1a142c189c 481 Pfam PF07969 Amidohydrolase family 45 459 4.8E-42 T 12-10-2018 IPR013108 Amidohydrolase 3 Vc3S01_A1537 161f0fc327aedadac0d5ae1a142c189c 481 Gene3D G3DSA:2.30.40.10 3 428 1.8E-169 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Vc3S01_A1537 161f0fc327aedadac0d5ae1a142c189c 481 SUPERFAMILY SSF51338 3 469 5.5E-16 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Vc3S01_A1537 161f0fc327aedadac0d5ae1a142c189c 481 Gene3D G3DSA:3.20.20.140 56 415 1.8E-169 T 12-10-2018 Vc3S01_A1537 161f0fc327aedadac0d5ae1a142c189c 481 SUPERFAMILY SSF51556 57 415 2.89E-85 T 12-10-2018 IPR032466 Metal-dependent hydrolase Vc3S01_A1537 161f0fc327aedadac0d5ae1a142c189c 481 Gene3D G3DSA:3.30.1490.130 284 340 1.8E-169 T 12-10-2018 IPR023100 D-aminoacylase, insert domain superfamily GO:0016811 Vc3S01_2467 9bd53c85079b6c2c2fa73e7707177f4b 259 Pfam PF02107 Flagellar L-ring protein 80 257 2.6E-56 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Vc3S01_2467 9bd53c85079b6c2c2fa73e7707177f4b 259 PRINTS PR01008 Flagellar L-ring protein signature 222 236 4.8E-21 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Vc3S01_2467 9bd53c85079b6c2c2fa73e7707177f4b 259 PRINTS PR01008 Flagellar L-ring protein signature 238 252 4.8E-21 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Vc3S01_2467 9bd53c85079b6c2c2fa73e7707177f4b 259 PRINTS PR01008 Flagellar L-ring protein signature 201 217 4.8E-21 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Vc3S01_2467 9bd53c85079b6c2c2fa73e7707177f4b 259 PRINTS PR01008 Flagellar L-ring protein signature 102 114 4.8E-21 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Vc3S01_2467 9bd53c85079b6c2c2fa73e7707177f4b 259 PRINTS PR01008 Flagellar L-ring protein signature 175 190 4.8E-21 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Vc3S01_2467 9bd53c85079b6c2c2fa73e7707177f4b 259 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 259 27.663 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Vc3S01_A0063 f0d37bd87ab55c69f56383e137213382 421 SUPERFAMILY SSF55298 155 281 2.04E-30 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Vc3S01_A0063 f0d37bd87ab55c69f56383e137213382 421 Gene3D G3DSA:3.30.1330.40 4 134 1.4E-29 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Vc3S01_A0063 f0d37bd87ab55c69f56383e137213382 421 SUPERFAMILY SSF55298 11 136 7.54E-29 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Vc3S01_A0063 f0d37bd87ab55c69f56383e137213382 421 Pfam PF01042 Endoribonuclease L-PSP 166 272 6.9E-25 T 12-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 Vc3S01_A0063 f0d37bd87ab55c69f56383e137213382 421 Pfam PF01042 Endoribonuclease L-PSP 310 410 4.0E-20 T 12-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 Vc3S01_A0063 f0d37bd87ab55c69f56383e137213382 421 Pfam PF01042 Endoribonuclease L-PSP 25 128 2.5E-21 T 12-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 Vc3S01_A0063 f0d37bd87ab55c69f56383e137213382 421 SUPERFAMILY SSF55298 305 414 2.2E-28 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Vc3S01_A0063 f0d37bd87ab55c69f56383e137213382 421 Gene3D G3DSA:3.30.1330.40 143 278 3.3E-33 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Vc3S01_A0063 f0d37bd87ab55c69f56383e137213382 421 Gene3D G3DSA:3.30.1330.40 291 417 1.0E-29 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Vc3S01_A1929 99ba1f9f4c7346a51cd6ddd3b77f50d8 311 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 253 266 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 Vc3S01_A1929 99ba1f9f4c7346a51cd6ddd3b77f50d8 311 SUPERFAMILY SSF53613 8 298 1.42E-62 T 12-10-2018 IPR029056 Ribokinase-like Vc3S01_A1929 99ba1f9f4c7346a51cd6ddd3b77f50d8 311 Gene3D G3DSA:3.40.1190.20 1 309 2.6E-70 T 12-10-2018 IPR029056 Ribokinase-like Vc3S01_A1929 99ba1f9f4c7346a51cd6ddd3b77f50d8 311 Pfam PF00294 pfkB family carbohydrate kinase 10 298 2.3E-56 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB Vc3S01_A0615 dc6aea72739f83c82c28f5516f92711a 217 Pfam PF01966 HD domain 33 134 1.7E-14 T 12-10-2018 IPR006674 HD domain Vc3S01_A0615 dc6aea72739f83c82c28f5516f92711a 217 SMART SM00471 27 144 3.2E-7 T 12-10-2018 IPR003607 HD/PDEase domain Vc3S01_A0615 dc6aea72739f83c82c28f5516f92711a 217 Gene3D G3DSA:1.10.3210.50 7 217 1.3E-69 T 12-10-2018 Vc3S01_A0615 dc6aea72739f83c82c28f5516f92711a 217 SUPERFAMILY SSF109604 14 216 5.34E-61 T 12-10-2018 Vc3S01_A0808 4783e224037ad64233565334b8a5e6e8 226 Gene3D G3DSA:3.10.129.10 76 225 1.4E-35 T 12-10-2018 Vc3S01_A0808 4783e224037ad64233565334b8a5e6e8 226 SUPERFAMILY SSF54637 77 221 8.95E-31 T 12-10-2018 IPR029069 HotDog domain superfamily Vc3S01_A0808 4783e224037ad64233565334b8a5e6e8 226 Pfam PF01575 MaoC like domain 85 201 4.1E-22 T 12-10-2018 IPR002539 MaoC-like dehydratase domain Vc3S01_1941 8eae7465255dcefa7a6523de31653520 364 Gene3D G3DSA:3.90.1150.10 262 364 6.6E-40 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Vc3S01_1941 8eae7465255dcefa7a6523de31653520 364 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 8 363 8.0E-161 T 12-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 Vc3S01_1941 8eae7465255dcefa7a6523de31653520 364 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 191 210 - T 12-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site Vc3S01_1941 8eae7465255dcefa7a6523de31653520 364 SUPERFAMILY SSF53383 8 362 2.66E-115 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Vc3S01_1941 8eae7465255dcefa7a6523de31653520 364 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 6 363 52.118 T 12-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 Vc3S01_1941 8eae7465255dcefa7a6523de31653520 364 Gene3D G3DSA:3.40.640.10 21 261 1.7E-92 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Vc3S01_1941 8eae7465255dcefa7a6523de31653520 364 Pfam PF00266 Aminotransferase class-V 8 352 1.1E-61 T 12-10-2018 IPR000192 Aminotransferase class V domain Vc3S01_1941 8eae7465255dcefa7a6523de31653520 364 PIRSF PIRSF000525 2 364 1.6E-153 T 12-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 Vc3S01_0526 0988e177a4ddbad49994b007f7dfef82 236 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 11 230 6.4E-78 T 12-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 Vc3S01_0526 0988e177a4ddbad49994b007f7dfef82 236 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 8 230 42.668 T 12-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 Vc3S01_0526 0988e177a4ddbad49994b007f7dfef82 236 Gene3D G3DSA:3.90.550.10 4 234 4.3E-76 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Vc3S01_0526 0988e177a4ddbad49994b007f7dfef82 236 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 106 113 - T 12-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 Vc3S01_0526 0988e177a4ddbad49994b007f7dfef82 236 SUPERFAMILY SSF53448 10 231 1.3E-62 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Vc3S01_0526 0988e177a4ddbad49994b007f7dfef82 236 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 10 231 2.9E-78 T 12-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 Vc3S01_0818 4c04a57df1ad7eaad2d030aeaa24dc13 426 Pfam PF09839 Uncharacterized protein conserved in bacteria (DUF2066) 18 249 2.1E-70 T 12-10-2018 IPR018642 Protein of unknown function DUF2066 Vc3S01_A1739 0e3fd51d19bea201d70587e46394a4a2 363 Gene3D G3DSA:3.40.190.10 27 136 6.1E-23 T 12-10-2018 Vc3S01_A1739 0e3fd51d19bea201d70587e46394a4a2 363 Gene3D G3DSA:3.40.190.10 236 323 4.6E-19 T 12-10-2018 Vc3S01_A1739 0e3fd51d19bea201d70587e46394a4a2 363 SUPERFAMILY SSF53850 16 361 1.16E-45 T 12-10-2018 Vc3S01_A1739 0e3fd51d19bea201d70587e46394a4a2 363 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 32 361 5.7E-44 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Vc3S01_A1739 0e3fd51d19bea201d70587e46394a4a2 363 Pfam PF00060 Ligand-gated ion channel 138 249 6.1E-9 T 12-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 Vc3S01_A1739 0e3fd51d19bea201d70587e46394a4a2 363 Gene3D G3DSA:3.40.190.10 324 360 4.6E-19 T 12-10-2018 Vc3S01_A1739 0e3fd51d19bea201d70587e46394a4a2 363 SMART SM00062 31 363 2.3E-18 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Vc3S01_A0898 25a9607be2f91efbc197b0f2d2788b8f 504 PIRSF PIRSF036685 2 500 2.2E-183 T 12-10-2018 IPR012189 Peptidase M28E, aminopeptidase AP1 Vc3S01_A0898 25a9607be2f91efbc197b0f2d2788b8f 504 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 419 479 2.5E-6 T 12-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial Vc3S01_A0898 25a9607be2f91efbc197b0f2d2788b8f 504 Pfam PF04389 Peptidase family M28 189 379 9.9E-34 T 12-10-2018 IPR007484 Peptidase M28 Vc3S01_A0898 25a9607be2f91efbc197b0f2d2788b8f 504 Gene3D G3DSA:2.60.120.380 400 499 5.5E-21 T 12-10-2018 Vc3S01_A0898 25a9607be2f91efbc197b0f2d2788b8f 504 SUPERFAMILY SSF53187 108 390 6.29E-61 T 12-10-2018 Vc3S01_A0898 25a9607be2f91efbc197b0f2d2788b8f 504 Gene3D G3DSA:3.40.630.10 106 398 6.4E-81 T 12-10-2018 Vc3S01_A1431 66b92c5a587995d1514db6fee6e1f3e4 423 SMART SM00382 195 349 0.0042 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_A1431 66b92c5a587995d1514db6fee6e1f3e4 423 Gene3D G3DSA:3.40.50.300 168 418 4.6E-73 T 12-10-2018 Vc3S01_A1431 66b92c5a587995d1514db6fee6e1f3e4 423 Pfam PF00437 Type II/IV secretion system protein 71 347 2.7E-79 T 12-10-2018 IPR001482 Type II/IV secretion system protein Vc3S01_A1431 66b92c5a587995d1514db6fee6e1f3e4 423 Gene3D G3DSA:3.30.450.380 1 166 1.9E-41 T 12-10-2018 Vc3S01_A1431 66b92c5a587995d1514db6fee6e1f3e4 423 SUPERFAMILY SSF52540 56 375 7.81E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2728 31b38479dae0288b435da5e13c322254 262 Gene3D G3DSA:3.10.450.70 38 102 3.7E-19 T 12-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 Vc3S01_2728 31b38479dae0288b435da5e13c322254 262 Gene3D G3DSA:3.40.30.10 103 262 4.3E-44 T 12-10-2018 Vc3S01_2728 31b38479dae0288b435da5e13c322254 262 Pfam PF10411 Disulfide bond isomerase protein N-terminus 49 99 1.6E-13 T 12-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal Vc3S01_2728 31b38479dae0288b435da5e13c322254 262 SUPERFAMILY SSF52833 122 261 4.75E-37 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Vc3S01_2728 31b38479dae0288b435da5e13c322254 262 Pfam PF13098 Thioredoxin-like domain 131 259 3.2E-24 T 12-10-2018 IPR012336 Thioredoxin-like fold Vc3S01_2728 31b38479dae0288b435da5e13c322254 262 SUPERFAMILY SSF54423 44 100 1.2E-14 T 12-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 Vc3S01_0529 53d5e57b362611fe2628d2d1de359db6 258 SUPERFAMILY SSF64167 11 256 8.11E-86 T 12-10-2018 Vc3S01_0529 53d5e57b362611fe2628d2d1de359db6 258 Gene3D G3DSA:3.40.1210.10 2 258 1.0E-96 T 12-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 Vc3S01_0529 53d5e57b362611fe2628d2d1de359db6 258 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 12 242 3.5E-73 T 12-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 Vc3S01_0529 53d5e57b362611fe2628d2d1de359db6 258 Pfam PF01975 Survival protein SurE 13 191 1.9E-61 T 12-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 Vc3S01_0529 53d5e57b362611fe2628d2d1de359db6 258 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 11 257 40.77 T 12-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 Vc3S01_p20055 0b88f5f64631c9864f838560a3d61684 423 Pfam PF13091 PLD-like domain 29 137 5.9E-13 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Vc3S01_p20055 0b88f5f64631c9864f838560a3d61684 423 Gene3D G3DSA:3.30.870.10 5 162 1.1E-20 T 12-10-2018 Vc3S01_p20055 0b88f5f64631c9864f838560a3d61684 423 SUPERFAMILY SSF56024 30 140 4.71E-11 T 12-10-2018 Vc3S01_p20194 4386140d3698ececbae89bc54c0ca230 123 Pfam PF06271 RDD family 3 114 7.0E-12 T 12-10-2018 IPR010432 RDD Vc3S01_0453 f6df85d4eeff3ea3d9f4e2022571c9fa 251 Pfam PF04794 YdjC-like protein 2 229 1.4E-53 T 12-10-2018 IPR006879 Carbohydrate deacetylase YdjC-like Vc3S01_0453 f6df85d4eeff3ea3d9f4e2022571c9fa 251 SUPERFAMILY SSF88713 1 242 1.89E-68 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Vc3S01_0453 f6df85d4eeff3ea3d9f4e2022571c9fa 251 Hamap MF_01246 Chitooligosaccharide deacetylase [chbG]. 1 239 38.712 T 12-10-2018 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria GO:0000272|GO:0016811 Vc3S01_0453 f6df85d4eeff3ea3d9f4e2022571c9fa 251 Gene3D G3DSA:3.20.20.370 1 243 2.2E-72 T 12-10-2018 Vc3S01_2979 59db853e4c26dd59e4bf29362c05c10f 371 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 15 363 1.6E-90 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase Vc3S01_2979 59db853e4c26dd59e4bf29362c05c10f 371 SUPERFAMILY SSF53383 3 367 5.28E-94 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Vc3S01_2979 59db853e4c26dd59e4bf29362c05c10f 371 Gene3D G3DSA:3.40.640.10 2 369 4.0E-98 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Vc3S01_2979 59db853e4c26dd59e4bf29362c05c10f 371 PIRSF PIRSF000390 1 371 4.4E-103 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase Vc3S01_1648 0521f426159a88e35ad128ba4eba5b6f 153 SUPERFAMILY SSF46689 7 115 5.38E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_1648 0521f426159a88e35ad128ba4eba5b6f 153 Pfam PF13518 Helix-turn-helix domain 12 62 1.7E-6 T 12-10-2018 Vc3S01_A1895 384978ae4ecaffb3467e2baadd5dcc53 401 Gene3D G3DSA:1.25.40.10 184 282 8.9E-17 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_A1895 384978ae4ecaffb3467e2baadd5dcc53 401 SMART SM00671 135 170 3.8 T 12-10-2018 IPR006597 Sel1-like repeat Vc3S01_A1895 384978ae4ecaffb3467e2baadd5dcc53 401 SMART SM00671 243 276 260.0 T 12-10-2018 IPR006597 Sel1-like repeat Vc3S01_A1895 384978ae4ecaffb3467e2baadd5dcc53 401 SMART SM00671 207 242 1.1E-4 T 12-10-2018 IPR006597 Sel1-like repeat Vc3S01_A1895 384978ae4ecaffb3467e2baadd5dcc53 401 SMART SM00671 67 97 140.0 T 12-10-2018 IPR006597 Sel1-like repeat Vc3S01_A1895 384978ae4ecaffb3467e2baadd5dcc53 401 SMART SM00671 171 206 23.0 T 12-10-2018 IPR006597 Sel1-like repeat Vc3S01_A1895 384978ae4ecaffb3467e2baadd5dcc53 401 Pfam PF08238 Sel1 repeat 212 242 1.7E-5 T 12-10-2018 IPR006597 Sel1-like repeat Vc3S01_A1895 384978ae4ecaffb3467e2baadd5dcc53 401 Pfam PF08238 Sel1 repeat 136 169 1.0 T 12-10-2018 IPR006597 Sel1-like repeat Vc3S01_A1895 384978ae4ecaffb3467e2baadd5dcc53 401 Pfam PF08238 Sel1 repeat 182 206 14.0 T 12-10-2018 IPR006597 Sel1-like repeat Vc3S01_A1895 384978ae4ecaffb3467e2baadd5dcc53 401 Pfam PF08238 Sel1 repeat 79 97 0.057 T 12-10-2018 IPR006597 Sel1-like repeat Vc3S01_A1895 384978ae4ecaffb3467e2baadd5dcc53 401 SUPERFAMILY SSF81901 71 280 1.4E-28 T 12-10-2018 Vc3S01_A1895 384978ae4ecaffb3467e2baadd5dcc53 401 Gene3D G3DSA:1.25.40.10 22 183 3.2E-14 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_1447 fb1c6aae39308a6f930fe10fcfa5b879 329 SMART SM00354 2 72 6.7E-21 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Vc3S01_1447 fb1c6aae39308a6f930fe10fcfa5b879 329 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 3.2E-17 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Vc3S01_1447 fb1c6aae39308a6f930fe10fcfa5b879 329 Gene3D G3DSA:3.40.50.2300 159 288 7.3E-70 T 12-10-2018 Vc3S01_1447 fb1c6aae39308a6f930fe10fcfa5b879 329 Gene3D G3DSA:1.10.260.40 1 60 1.5E-21 T 12-10-2018 Vc3S01_1447 fb1c6aae39308a6f930fe10fcfa5b879 329 Pfam PF13377 Periplasmic binding protein-like domain 168 328 3.6E-32 T 12-10-2018 Vc3S01_1447 fb1c6aae39308a6f930fe10fcfa5b879 329 SUPERFAMILY SSF53822 63 328 3.03E-67 T 12-10-2018 IPR028082 Periplasmic binding protein-like I Vc3S01_1447 fb1c6aae39308a6f930fe10fcfa5b879 329 SUPERFAMILY SSF47413 2 60 1.63E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Vc3S01_1447 fb1c6aae39308a6f930fe10fcfa5b879 329 Gene3D G3DSA:3.40.50.2300 62 306 7.3E-70 T 12-10-2018 Vc3S01_1447 fb1c6aae39308a6f930fe10fcfa5b879 329 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 12-10-2018 Vc3S01_A1536 967ece4911f16d486448a9e026e36d76 130 Pfam PF01042 Endoribonuclease L-PSP 20 123 9.9E-23 T 12-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 Vc3S01_A1536 967ece4911f16d486448a9e026e36d76 130 Gene3D G3DSA:3.30.1330.40 16 129 4.4E-32 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Vc3S01_A1536 967ece4911f16d486448a9e026e36d76 130 SUPERFAMILY SSF55298 18 127 2.83E-31 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Vc3S01_0226 2fa231b488feb26bae77aa50d9ac7b5f 227 Gene3D G3DSA:3.40.109.10 4 226 3.5E-50 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Vc3S01_0226 2fa231b488feb26bae77aa50d9ac7b5f 227 SUPERFAMILY SSF55469 20 226 5.37E-42 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Vc3S01_0226 2fa231b488feb26bae77aa50d9ac7b5f 227 Pfam PF00881 Nitroreductase family 33 202 1.2E-21 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Vc3S01_2771 a8d50fac753e8ae7320907b309ba2cd7 152 Pfam PF05258 Protein of unknown function (DUF721) 11 85 8.7E-13 T 12-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 Vc3S01_1054 0fd847dc205f5f8c4a22775d2e7ce0f6 85 SUPERFAMILY SSF54285 1 85 4.86E-19 T 12-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp Vc3S01_1054 0fd847dc205f5f8c4a22775d2e7ce0f6 85 Pfam PF02597 ThiS family 4 85 2.5E-20 T 12-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 Vc3S01_1054 0fd847dc205f5f8c4a22775d2e7ce0f6 85 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 85 2.4E-20 T 12-10-2018 Vc3S01_1054 0fd847dc205f5f8c4a22775d2e7ce0f6 85 Gene3D G3DSA:3.10.20.30 1 85 1.1E-21 T 12-10-2018 IPR012675 Beta-grasp domain superfamily Vc3S01_2131 bec107c5c86ead8f92bb5f517838e25a 123 Pfam PF13453 Transcription factor zinc-finger 2 39 6.4E-11 T 12-10-2018 IPR027392 Transcription factor zinc-finger Vc3S01_1621 09bb9e002a361ea7e2ada25664dfbf9a 335 PIRSF PIRSF001361 1 335 4.3E-152 T 12-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 Vc3S01_1621 09bb9e002a361ea7e2ada25664dfbf9a 335 SUPERFAMILY SSF51569 2 332 1.87E-128 T 12-10-2018 Vc3S01_1621 09bb9e002a361ea7e2ada25664dfbf9a 335 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 2 333 7.3E-157 T 12-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 Vc3S01_1621 09bb9e002a361ea7e2ada25664dfbf9a 335 Pfam PF00793 DAHP synthetase I family 29 323 1.3E-98 T 12-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Vc3S01_1621 09bb9e002a361ea7e2ada25664dfbf9a 335 Gene3D G3DSA:3.20.20.70 1 335 8.0E-149 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_0611 ec23e24a6d2e12a9d3ba658ce551fc1c 113 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 9 113 1.8E-36 T 12-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 Vc3S01_0611 ec23e24a6d2e12a9d3ba658ce551fc1c 113 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 94 111 - T 12-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 Vc3S01_0611 ec23e24a6d2e12a9d3ba658ce551fc1c 113 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 113 35.842 T 12-10-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 Vc3S01_0611 ec23e24a6d2e12a9d3ba658ce551fc1c 113 Pfam PF01521 Iron-sulphur cluster biosynthesis 8 108 2.6E-18 T 12-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 Vc3S01_0611 ec23e24a6d2e12a9d3ba658ce551fc1c 113 SUPERFAMILY SSF89360 7 99 3.73E-29 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Vc3S01_0611 ec23e24a6d2e12a9d3ba658ce551fc1c 113 Gene3D G3DSA:2.60.300.12 8 113 1.3E-31 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Vc3S01_2146 d34fa4fa746fcd21461eef467495f031 462 TIGRFAM TIGR02514 type_III_yscP: type III secretion system needle length determinant 329 461 3.2E-48 T 12-10-2018 IPR013354 Type III secretion system needle length determinant, C-terminal domain GO:0009405 Vc3S01_0747 fc5a15c02ff7864affc8142834d3d912 428 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 1 428 42.953 T 12-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 Vc3S01_0747 fc5a15c02ff7864affc8142834d3d912 428 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 2 428 1.4E-194 T 12-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 Vc3S01_0747 fc5a15c02ff7864affc8142834d3d912 428 Pfam PF11973 NQRA C-terminal domain 243 292 6.8E-21 T 12-10-2018 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 Vc3S01_0747 fc5a15c02ff7864affc8142834d3d912 428 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 2 238 4.0E-103 T 12-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 Vc3S01_A1172 2a1a028e9c2ff444b9c3b59ba003bf70 94 Pfam PF13778 Domain of unknown function (DUF4174) 2 84 3.5E-20 T 12-10-2018 IPR025232 Domain of unknown function DUF4174 Vc3S01_A0792 e20d04253836c60a44e437c10dba1d7e 212 Pfam PF01470 Pyroglutamyl peptidase 2 199 1.1E-74 T 12-10-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like MetaCyc: PWY-7942 Vc3S01_A0792 e20d04253836c60a44e437c10dba1d7e 212 Gene3D G3DSA:3.40.630.20 1 212 9.2E-76 T 12-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 Vc3S01_A0792 e20d04253836c60a44e437c10dba1d7e 212 PIRSF PIRSF015592 1 210 1.2E-80 T 12-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 Vc3S01_A0792 e20d04253836c60a44e437c10dba1d7e 212 TIGRFAM TIGR00504 pyro_pdase: pyroglutamyl-peptidase I 3 210 1.6E-76 T 12-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 Vc3S01_A0792 e20d04253836c60a44e437c10dba1d7e 212 ProSitePatterns PS01333 Pyrrolidone-carboxylate peptidase glutamic acid active site. 69 85 - T 12-10-2018 IPR033693 Pyroglutamyl peptidase I, Glu active site MetaCyc: PWY-7942 Vc3S01_A0792 e20d04253836c60a44e437c10dba1d7e 212 Hamap MF_00417 Pyrrolidone-carboxylate peptidase [pcp]. 2 198 39.22 T 12-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 Vc3S01_A0792 e20d04253836c60a44e437c10dba1d7e 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 4 27 4.6E-46 T 12-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 Vc3S01_A0792 e20d04253836c60a44e437c10dba1d7e 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 132 148 4.6E-46 T 12-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 Vc3S01_A0792 e20d04253836c60a44e437c10dba1d7e 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 160 172 4.6E-46 T 12-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 Vc3S01_A0792 e20d04253836c60a44e437c10dba1d7e 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 80 100 4.6E-46 T 12-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 Vc3S01_A0792 e20d04253836c60a44e437c10dba1d7e 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 62 74 4.6E-46 T 12-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 Vc3S01_A0792 e20d04253836c60a44e437c10dba1d7e 212 ProSitePatterns PS01334 Pyrrolidone-carboxylate peptidase cysteine active site. 130 144 - T 12-10-2018 IPR033694 Pyroglutamyl peptidase I, Cys active site MetaCyc: PWY-7942 Vc3S01_A0792 e20d04253836c60a44e437c10dba1d7e 212 SUPERFAMILY SSF53182 1 211 1.1E-70 T 12-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 Vc3S01_3156 ea006295470b994a9f52816d8eabb514 368 Gene3D G3DSA:2.40.50.100 68 196 4.7E-75 T 12-10-2018 Vc3S01_3156 ea006295470b994a9f52816d8eabb514 368 Gene3D G3DSA:2.40.30.170 58 279 4.7E-75 T 12-10-2018 Vc3S01_3156 ea006295470b994a9f52816d8eabb514 368 Gene3D G3DSA:2.40.420.20 280 351 4.7E-75 T 12-10-2018 Vc3S01_3156 ea006295470b994a9f52816d8eabb514 368 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 61 269 6.9E-29 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Vc3S01_3156 ea006295470b994a9f52816d8eabb514 368 Gene3D G3DSA:1.10.287.470 103 162 4.7E-75 T 12-10-2018 Vc3S01_3156 ea006295470b994a9f52816d8eabb514 368 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 353 7.3E-75 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Vc3S01_3156 ea006295470b994a9f52816d8eabb514 368 SUPERFAMILY SSF111369 58 273 4.18E-42 T 12-10-2018 Vc3S01_0633 ac8f72c46cf8fe7cfcb26171a22a5aa3 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.574 T 12-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_0633 ac8f72c46cf8fe7cfcb26171a22a5aa3 89 Gene3D G3DSA:1.10.287.10 2 89 6.3E-35 T 12-10-2018 Vc3S01_0633 ac8f72c46cf8fe7cfcb26171a22a5aa3 89 SUPERFAMILY SSF47060 3 89 1.21E-34 T 12-10-2018 IPR009068 S15/NS1, RNA-binding Vc3S01_0633 ac8f72c46cf8fe7cfcb26171a22a5aa3 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 12-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_0633 ac8f72c46cf8fe7cfcb26171a22a5aa3 89 SMART SM01387 8 88 4.4E-52 T 12-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_0633 ac8f72c46cf8fe7cfcb26171a22a5aa3 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 2.0E-29 T 12-10-2018 Vc3S01_0633 ac8f72c46cf8fe7cfcb26171a22a5aa3 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 9.4E-39 T 12-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_0633 ac8f72c46cf8fe7cfcb26171a22a5aa3 89 Pfam PF00312 Ribosomal protein S15 8 88 5.5E-36 T 12-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_2013 5dce8d94b781305918ee0dabbd664281 186 Gene3D G3DSA:1.10.340.30 3 186 3.3E-75 T 12-10-2018 Vc3S01_2013 5dce8d94b781305918ee0dabbd664281 186 Pfam PF03352 Methyladenine glycosylase 8 183 2.0E-72 T 12-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 Vc3S01_2013 5dce8d94b781305918ee0dabbd664281 186 SUPERFAMILY SSF48150 5 184 4.55E-73 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Vc3S01_1917 5f6caeb8403a03e4782bf24c55e266e3 252 PRINTS PR01486 Bacterial phospholipase A1 protein signature 222 242 2.3E-21 T 12-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 Vc3S01_1917 5f6caeb8403a03e4782bf24c55e266e3 252 PRINTS PR01486 Bacterial phospholipase A1 protein signature 53 70 2.3E-21 T 12-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 Vc3S01_1917 5f6caeb8403a03e4782bf24c55e266e3 252 PRINTS PR01486 Bacterial phospholipase A1 protein signature 200 217 2.3E-21 T 12-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 Vc3S01_1917 5f6caeb8403a03e4782bf24c55e266e3 252 PRINTS PR01486 Bacterial phospholipase A1 protein signature 96 115 2.3E-21 T 12-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 Vc3S01_1917 5f6caeb8403a03e4782bf24c55e266e3 252 PRINTS PR01486 Bacterial phospholipase A1 protein signature 167 185 2.3E-21 T 12-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 Vc3S01_1917 5f6caeb8403a03e4782bf24c55e266e3 252 Pfam PF02253 Phospholipase A1 18 249 2.1E-59 T 12-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 Vc3S01_1917 5f6caeb8403a03e4782bf24c55e266e3 252 SUPERFAMILY SSF56931 13 251 3.92E-69 T 12-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 Vc3S01_1917 5f6caeb8403a03e4782bf24c55e266e3 252 Gene3D G3DSA:2.40.230.10 9 252 3.6E-65 T 12-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 Vc3S01_A1030 5d43df017faaca950306c0cacc293ce6 353 SUPERFAMILY SSF111369 46 267 3.79E-27 T 12-10-2018 Vc3S01_A1030 5d43df017faaca950306c0cacc293ce6 353 Gene3D G3DSA:2.40.30.170 44 269 2.2E-61 T 12-10-2018 Vc3S01_A1030 5d43df017faaca950306c0cacc293ce6 353 Gene3D G3DSA:2.40.420.20 270 346 2.2E-61 T 12-10-2018 Vc3S01_A1030 5d43df017faaca950306c0cacc293ce6 353 Gene3D G3DSA:2.40.50.100 57 189 2.2E-61 T 12-10-2018 Vc3S01_A1030 5d43df017faaca950306c0cacc293ce6 353 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 33 348 2.2E-56 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Vc3S01_A1030 5d43df017faaca950306c0cacc293ce6 353 Gene3D G3DSA:1.10.287.470 91 149 2.2E-61 T 12-10-2018 Vc3S01_A1030 5d43df017faaca950306c0cacc293ce6 353 Pfam PF13437 HlyD family secretion protein 155 259 7.0E-6 T 12-10-2018 Vc3S01_A1030 5d43df017faaca950306c0cacc293ce6 353 Pfam PF13533 Biotin-lipoyl like 57 104 1.5E-9 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain Vc3S01_A1168 14526388817e03902a7926bb4f82c775 62 Pfam PF11661 Protein of unknown function (DUF2986) 1 43 7.8E-21 T 12-10-2018 IPR021677 Protein of unknown function DUF2986 Vc3S01_1980 66926a31fffc3dfd7f65ba0c60e6a3ca 234 Gene3D G3DSA:3.40.630.30 45 231 9.6E-19 T 12-10-2018 Vc3S01_1980 66926a31fffc3dfd7f65ba0c60e6a3ca 234 SUPERFAMILY SSF55729 123 228 1.19E-17 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_1980 66926a31fffc3dfd7f65ba0c60e6a3ca 234 Pfam PF13673 Acetyltransferase (GNAT) domain 119 230 5.5E-11 T 12-10-2018 IPR000182 GNAT domain Vc3S01_A1130 b054f447ce508a4427b412c6a71cb316 225 Gene3D G3DSA:2.40.70.10 86 212 1.1E-37 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily Vc3S01_A1130 b054f447ce508a4427b412c6a71cb316 225 SUPERFAMILY SSF50630 88 219 4.5E-40 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily Vc3S01_A1130 b054f447ce508a4427b412c6a71cb316 225 Pfam PF05618 Putative ATP-dependant zinc protease 88 222 2.6E-41 T 12-10-2018 Vc3S01_A1749 d5923068b3b0f254046ab30d955e8a87 356 Pfam PF06628 Catalase-related immune-responsive 284 342 4.1E-19 T 12-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Vc3S01_A1749 d5923068b3b0f254046ab30d955e8a87 356 SMART SM01060 1 259 1.1E-94 T 12-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Vc3S01_A1749 d5923068b3b0f254046ab30d955e8a87 356 SUPERFAMILY SSF56634 1 351 7.59E-124 T 12-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Vc3S01_A1749 d5923068b3b0f254046ab30d955e8a87 356 Gene3D G3DSA:2.40.180.10 1 356 6.1E-138 T 12-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 Vc3S01_A1749 d5923068b3b0f254046ab30d955e8a87 356 Pfam PF00199 Catalase 1 254 3.1E-101 T 12-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Vc3S01_A1749 d5923068b3b0f254046ab30d955e8a87 356 PRINTS PR00067 Catalase signature 188 214 2.7E-21 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Vc3S01_A1749 d5923068b3b0f254046ab30d955e8a87 356 PRINTS PR00067 Catalase signature 156 183 2.7E-21 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Vc3S01_A1749 d5923068b3b0f254046ab30d955e8a87 356 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 201 209 - T 12-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Vc3S01_2993 e8703710d14ddf8a3deabb8ff6f5a277 329 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 15 304 5.5E-77 T 12-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 Vc3S01_2993 e8703710d14ddf8a3deabb8ff6f5a277 329 Hamap MF_01944 Lipid A biosynthesis myristoyltransferase [lpxM]. 7 311 48.198 T 12-10-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243 Vc3S01_2993 e8703710d14ddf8a3deabb8ff6f5a277 329 TIGRFAM TIGR02208 lipid_A_msbB: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 13 312 7.2E-108 T 12-10-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243 Vc3S01_2993 e8703710d14ddf8a3deabb8ff6f5a277 329 PIRSF PIRSF026649 12 313 8.0E-82 T 12-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 Vc3S01_A0476 99b2d7b5cf5176b8b1b731f944e3ef14 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 186 9.0E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_A0476 99b2d7b5cf5176b8b1b731f944e3ef14 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 198 9.0E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_A0476 99b2d7b5cf5176b8b1b731f944e3ef14 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 170 9.0E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_A0476 99b2d7b5cf5176b8b1b731f944e3ef14 214 SUPERFAMILY SSF46894 143 212 8.5E-21 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Vc3S01_A0476 99b2d7b5cf5176b8b1b731f944e3ef14 214 Gene3D G3DSA:3.40.50.2300 7 143 9.0E-29 T 12-10-2018 Vc3S01_A0476 99b2d7b5cf5176b8b1b731f944e3ef14 214 Gene3D G3DSA:1.10.10.10 148 214 4.4E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A0476 99b2d7b5cf5176b8b1b731f944e3ef14 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 170 197 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_A0476 99b2d7b5cf5176b8b1b731f944e3ef14 214 SMART SM00421 153 210 3.1E-23 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_A0476 99b2d7b5cf5176b8b1b731f944e3ef14 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 210 7.9E-22 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_0018 9190d709d1dd3a138d1e03bf51fefb2b 111 SUPERFAMILY SSF46955 40 93 4.03E-6 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily Vc3S01_0018 9190d709d1dd3a138d1e03bf51fefb2b 111 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 41 87 4.4E-12 T 12-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 Vc3S01_0018 9190d709d1dd3a138d1e03bf51fefb2b 111 Pfam PF12728 Helix-turn-helix domain 41 90 9.8E-12 T 12-10-2018 Vc3S01_0393 e684d65ba26b6c41b398bc11002ce297 237 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 25 2.6E-6 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Vc3S01_0393 e684d65ba26b6c41b398bc11002ce297 237 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 25 1.6E-5 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Vc3S01_2406 4b4709b079ed3e698db34425dd8b71c1 180 SUPERFAMILY SSF82808 66 179 1.31E-49 T 12-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 Vc3S01_2406 4b4709b079ed3e698db34425dd8b71c1 180 SUPERFAMILY SSF47598 1 35 8.89E-14 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Vc3S01_2406 4b4709b079ed3e698db34425dd8b71c1 180 Gene3D G3DSA:1.10.1220.10 1 41 1.0E-23 T 12-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 Vc3S01_2406 4b4709b079ed3e698db34425dd8b71c1 180 Gene3D G3DSA:1.20.1380.10 65 180 1.6E-48 T 12-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 Vc3S01_2406 4b4709b079ed3e698db34425dd8b71c1 180 Hamap MF_00908 Negative modulator of initiation of replication [seqA]. 1 180 41.686 T 12-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 Vc3S01_2406 4b4709b079ed3e698db34425dd8b71c1 180 Pfam PF17206 SeqA protein N-terminal domain 1 36 3.2E-24 T 12-10-2018 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal Vc3S01_2406 4b4709b079ed3e698db34425dd8b71c1 180 Pfam PF03925 SeqA protein C-terminal domain 71 178 7.5E-47 T 12-10-2018 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 Vc3S01_2406 4b4709b079ed3e698db34425dd8b71c1 180 PIRSF PIRSF019401 1 180 8.2E-54 T 12-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 Vc3S01_A1697 1fed965085b71211b8924ce2c2b103f5 413 Pfam PF00437 Type II/IV secretion system protein 71 347 1.9E-79 T 12-10-2018 IPR001482 Type II/IV secretion system protein Vc3S01_A1697 1fed965085b71211b8924ce2c2b103f5 413 SUPERFAMILY SSF52540 52 371 5.82E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A1697 1fed965085b71211b8924ce2c2b103f5 413 Gene3D G3DSA:3.40.50.300 168 409 2.6E-74 T 12-10-2018 Vc3S01_A1697 1fed965085b71211b8924ce2c2b103f5 413 Gene3D G3DSA:3.30.450.380 4 166 1.9E-38 T 12-10-2018 Vc3S01_A0668 93bf37080cf0579959d004d16e379b0f 206 Pfam PF11363 Protein of unknown function (DUF3164) 12 205 1.8E-84 T 12-10-2018 IPR021505 Bacteriophage B3, Orf6 Vc3S01_0704 650f913085373030408ae6678348d791 183 Gene3D G3DSA:3.10.490.10 1 120 2.1E-9 T 12-10-2018 Vc3S01_0704 650f913085373030408ae6678348d791 183 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 3 108 1.7E-9 T 12-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like Vc3S01_0704 650f913085373030408ae6678348d791 183 SUPERFAMILY SSF110857 1 124 6.41E-17 T 12-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily Vc3S01_A0922 736aff609883f3eefed57c71c7e1399f 106 PIRSF PIRSF028139 1 106 8.7E-40 T 12-10-2018 IPR014980 Dopa 4,5-dioxygenase Vc3S01_A0922 736aff609883f3eefed57c71c7e1399f 106 SUPERFAMILY SSF143410 1 102 1.44E-33 T 12-10-2018 IPR023389 DOPA-like superfamily Vc3S01_A0922 736aff609883f3eefed57c71c7e1399f 106 Gene3D G3DSA:3.30.70.1240 1 104 3.0E-29 T 12-10-2018 IPR023389 DOPA-like superfamily Vc3S01_A0922 736aff609883f3eefed57c71c7e1399f 106 Pfam PF08883 Dopa 4,5-dioxygenase family 2 99 1.5E-27 T 12-10-2018 IPR014980 Dopa 4,5-dioxygenase Vc3S01_A1587 dd707c3edde3afb8c578db68f93c1898 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 1.4E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Vc3S01_A1587 dd707c3edde3afb8c578db68f93c1898 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 1.4E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Vc3S01_A1587 dd707c3edde3afb8c578db68f93c1898 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 1.4E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Vc3S01_A1587 dd707c3edde3afb8c578db68f93c1898 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 1.4E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Vc3S01_A1587 dd707c3edde3afb8c578db68f93c1898 138 SUPERFAMILY SSF46785 6 136 2.73E-31 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A1587 dd707c3edde3afb8c578db68f93c1898 138 Pfam PF01047 MarR family 32 88 3.5E-15 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Vc3S01_A1587 dd707c3edde3afb8c578db68f93c1898 138 SMART SM00347 24 124 1.4E-22 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Vc3S01_A1587 dd707c3edde3afb8c578db68f93c1898 138 Gene3D G3DSA:1.10.10.10 1 137 1.1E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A0290 4d87f7c88ce84564a35d41118e117241 367 Gene3D G3DSA:3.90.1150.10 8 353 5.2E-123 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Vc3S01_A0290 4d87f7c88ce84564a35d41118e117241 367 SUPERFAMILY SSF53383 3 362 5.75E-89 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Vc3S01_A0290 4d87f7c88ce84564a35d41118e117241 367 TIGRFAM TIGR02326 transamin_PhnW: 2-aminoethylphosphonate--pyruvate transaminase 2 365 5.2E-202 T 12-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 Vc3S01_A0290 4d87f7c88ce84564a35d41118e117241 367 Pfam PF00266 Aminotransferase class-V 36 313 1.2E-30 T 12-10-2018 IPR000192 Aminotransferase class V domain Vc3S01_A0290 4d87f7c88ce84564a35d41118e117241 367 Gene3D G3DSA:3.40.640.10 16 262 5.2E-123 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Vc3S01_A0290 4d87f7c88ce84564a35d41118e117241 367 Hamap MF_01376 2-aminoethylphosphonate--pyruvate transaminase [phnW]. 1 367 214.396 T 12-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 Vc3S01_A0290 4d87f7c88ce84564a35d41118e117241 367 TIGRFAM TIGR03301 PhnW-AepZ: 2-aminoethylphosphonate aminotransferase 6 362 6.4E-171 T 12-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 Vc3S01_A0290 4d87f7c88ce84564a35d41118e117241 367 PIRSF PIRSF000524 1 365 6.3E-58 T 12-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 Vc3S01_2611 962a7c1e6472f36c567966c3f2e4200d 378 SUPERFAMILY SSF53474 67 217 1.02E-30 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_2611 962a7c1e6472f36c567966c3f2e4200d 378 Pfam PF01764 Lipase (class 3) 73 203 3.6E-21 T 12-10-2018 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: R-HSA-426048 Vc3S01_2611 962a7c1e6472f36c567966c3f2e4200d 378 Gene3D G3DSA:3.40.50.1820 56 269 4.6E-36 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_2220 fc7f2cee12b340bea0a742ffa01ce6be 196 Pfam PF04994 TfoX C-terminal domain 115 194 4.7E-31 T 12-10-2018 IPR007077 TfoX, C-terminal Vc3S01_2220 fc7f2cee12b340bea0a742ffa01ce6be 196 Gene3D G3DSA:1.10.150.20 114 195 1.0E-22 T 12-10-2018 Vc3S01_2220 fc7f2cee12b340bea0a742ffa01ce6be 196 SUPERFAMILY SSF159894 5 104 2.2E-31 T 12-10-2018 Vc3S01_2220 fc7f2cee12b340bea0a742ffa01ce6be 196 PIRSF PIRSF028788 1 196 1.8E-50 T 12-10-2018 IPR026256 Transcriptional regulator, TfoX/Sxy-type Vc3S01_2220 fc7f2cee12b340bea0a742ffa01ce6be 196 Gene3D G3DSA:3.30.1460.30 1 105 2.5E-38 T 12-10-2018 Vc3S01_2220 fc7f2cee12b340bea0a742ffa01ce6be 196 Pfam PF04993 TfoX N-terminal domain 12 103 1.4E-30 T 12-10-2018 IPR007076 TfoX, N-terminal Vc3S01_A1245 d6a066c61ba6644b11d8a020fcc859c8 150 Pfam PF09722 Protein of unknown function (DUF2384) 98 147 9.7E-15 T 12-10-2018 IPR024467 Domain of unknown function DUF2384 Vc3S01_A1245 d6a066c61ba6644b11d8a020fcc859c8 150 TIGRFAM TIGR02293 TAS_TIGR02293: putative toxin-antitoxin system antitoxin component, TIGR02293 family 24 150 1.1E-31 T 12-10-2018 IPR011979 Conserved hypothetical protein CHP02293 Vc3S01_p20198 11ff5741213b7245306598f082d0940c 559 TIGRFAM TIGR02675 tape_meas_nterm: tape measure domain 142 225 3.4E-16 T 12-10-2018 IPR013491 Caudovirus, tape measure, N-terminal Vc3S01_A0623 11ff5741213b7245306598f082d0940c 559 TIGRFAM TIGR02675 tape_meas_nterm: tape measure domain 142 225 3.4E-16 T 12-10-2018 IPR013491 Caudovirus, tape measure, N-terminal Vc3S01_0598 5fbc32a8fd199382a64174912756a3b0 296 Gene3D G3DSA:3.30.420.40 115 261 9.0E-67 T 12-10-2018 Vc3S01_0598 5fbc32a8fd199382a64174912756a3b0 296 SUPERFAMILY SSF53067 1 111 2.29E-25 T 12-10-2018 Vc3S01_0598 5fbc32a8fd199382a64174912756a3b0 296 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 6 283 1.0E-43 T 12-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 Vc3S01_0598 5fbc32a8fd199382a64174912756a3b0 296 SUPERFAMILY SSF53067 114 283 2.78E-42 T 12-10-2018 Vc3S01_0598 5fbc32a8fd199382a64174912756a3b0 296 Gene3D G3DSA:3.30.420.40 4 114 9.0E-67 T 12-10-2018 Vc3S01_3094 42bd5dd67ecfdcb57f7c4555b84b9a0e 249 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 5 239 15.927 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Vc3S01_3094 42bd5dd67ecfdcb57f7c4555b84b9a0e 249 Pfam PF00902 Sec-independent protein translocase protein (TatC) 13 222 3.9E-66 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Vc3S01_3094 42bd5dd67ecfdcb57f7c4555b84b9a0e 249 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 10 227 9.5E-76 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Vc3S01_3094 42bd5dd67ecfdcb57f7c4555b84b9a0e 249 ProSitePatterns PS01218 TatC family signature. 155 174 - T 12-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site Vc3S01_3094 42bd5dd67ecfdcb57f7c4555b84b9a0e 249 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 9 36 1.5E-51 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Vc3S01_3094 42bd5dd67ecfdcb57f7c4555b84b9a0e 249 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 86 104 1.5E-51 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Vc3S01_3094 42bd5dd67ecfdcb57f7c4555b84b9a0e 249 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 104 130 1.5E-51 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Vc3S01_3094 42bd5dd67ecfdcb57f7c4555b84b9a0e 249 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 155 183 1.5E-51 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Vc3S01_3013 cfeadc24e029c9ebb7619a65fb3159ee 196 Gene3D G3DSA:1.10.357.10 3 196 9.0E-78 T 12-10-2018 Vc3S01_3013 cfeadc24e029c9ebb7619a65fb3159ee 196 SUPERFAMILY SSF48498 81 191 8.45E-11 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Vc3S01_3013 cfeadc24e029c9ebb7619a65fb3159ee 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 58 3.4E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Vc3S01_3013 cfeadc24e029c9ebb7619a65fb3159ee 196 SUPERFAMILY SSF46689 5 78 1.5E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_3013 cfeadc24e029c9ebb7619a65fb3159ee 196 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 196 41.287 T 12-10-2018 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 Vc3S01_2529 9e65815f2ebb98cf1372a79988f998a3 220 SUPERFAMILY SSF55681 2 204 1.33E-71 T 12-10-2018 Vc3S01_2529 9e65815f2ebb98cf1372a79988f998a3 220 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 70 85 - T 12-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 Vc3S01_2529 9e65815f2ebb98cf1372a79988f998a3 220 Pfam PF03099 Biotin/lipoate A/B protein ligase family 59 158 7.8E-8 T 12-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 Vc3S01_2529 9e65815f2ebb98cf1372a79988f998a3 220 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 74 127 1.0E-24 T 12-10-2018 Vc3S01_2529 9e65815f2ebb98cf1372a79988f998a3 220 Hamap MF_00013 Octanoyltransferase [lipB]. 4 205 38.101 T 12-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Vc3S01_2529 9e65815f2ebb98cf1372a79988f998a3 220 PIRSF PIRSF016262 1 216 5.3E-63 T 12-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Vc3S01_2529 9e65815f2ebb98cf1372a79988f998a3 220 Gene3D G3DSA:3.30.930.10 1 203 1.5E-64 T 12-10-2018 Vc3S01_2529 9e65815f2ebb98cf1372a79988f998a3 220 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 26 202 7.1E-71 T 12-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Vc3S01_3071 26aebcc9638edb649349a0b9e90086be 184 Pfam PF13521 AAA domain 4 164 7.2E-38 T 12-10-2018 IPR038727 NadR/Ttd14, AAA domain Vc3S01_3071 26aebcc9638edb649349a0b9e90086be 184 SUPERFAMILY SSF52540 3 172 2.87E-17 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_3071 26aebcc9638edb649349a0b9e90086be 184 Gene3D G3DSA:3.40.50.300 1 168 5.5E-7 T 12-10-2018 Vc3S01_A1679 674d37d3353879fde75226e5c549e54e 179 Gene3D G3DSA:1.20.1550.10 3 105 5.7E-13 T 12-10-2018 IPR023380 DsbB-like superfamily Vc3S01_A1679 674d37d3353879fde75226e5c549e54e 179 Pfam PF02600 Disulfide bond formation protein DsbB 9 90 3.3E-14 T 12-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 Vc3S01_A1679 674d37d3353879fde75226e5c549e54e 179 SUPERFAMILY SSF158442 11 122 3.79E-22 T 12-10-2018 IPR023380 DsbB-like superfamily Vc3S01_3095 203c7fcfab7c101eca34d0c0f1c31ce6 132 Pfam PF02416 mttA/Hcf106 family 4 32 8.7E-5 T 12-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 Vc3S01_3095 203c7fcfab7c101eca34d0c0f1c31ce6 132 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 80 2.1E-32 T 12-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 Vc3S01_3095 203c7fcfab7c101eca34d0c0f1c31ce6 132 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 132 18.204 T 12-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 Vc3S01_3095 203c7fcfab7c101eca34d0c0f1c31ce6 132 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 3.8E-27 T 12-10-2018 Vc3S01_3095 203c7fcfab7c101eca34d0c0f1c31ce6 132 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 3.8E-27 T 12-10-2018 Vc3S01_3095 203c7fcfab7c101eca34d0c0f1c31ce6 132 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 3.8E-27 T 12-10-2018 Vc3S01_A0705 07df763eeb8b80d5443c4b6e77936802 201 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 16 194 8.0E-24 T 12-10-2018 IPR013046 Phage baseplate assembly protein V/Gp45 Vc3S01_A0705 07df763eeb8b80d5443c4b6e77936802 201 Gene3D G3DSA:2.20.25.540 89 141 3.8E-17 T 12-10-2018 Vc3S01_A0705 07df763eeb8b80d5443c4b6e77936802 201 Pfam PF06890 Bacteriophage Mu Gp45 protein 23 188 1.1E-38 T 12-10-2018 IPR014462 Phage-associated protein Gp45 Vc3S01_A0705 07df763eeb8b80d5443c4b6e77936802 201 PIRSF PIRSF012337 3 200 2.9E-56 T 12-10-2018 IPR014462 Phage-associated protein Gp45 Vc3S01_2252 870116dd9bb53e84f4ac1cc1daadcea2 325 Gene3D G3DSA:2.40.128.140 20 323 6.2E-53 T 12-10-2018 IPR037107 Putative outer membrane protein superfamily Vc3S01_2252 870116dd9bb53e84f4ac1cc1daadcea2 325 Pfam PF09982 Uncharacterized protein conserved in bacteria (DUF2219) 28 322 1.7E-83 T 12-10-2018 IPR018707 Protein of unknown function DUF2219 Vc3S01_2158 bd3ebf130c66418354b964561eb4db9b 211 TIGRFAM TIGR02499 HrpE_YscL_not: type III secretion apparatus protein, HrpE/YscL family 19 187 3.4E-40 T 12-10-2018 IPR012842 Type III secretion system HrpE/YscL Vc3S01_2158 bd3ebf130c66418354b964561eb4db9b 211 Pfam PF02108 Flagellar assembly protein FliH 83 194 5.3E-18 T 12-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE Vc3S01_2158 bd3ebf130c66418354b964561eb4db9b 211 SUPERFAMILY SSF160527 99 204 1.7E-5 T 12-10-2018 Vc3S01_A1342 bc35d15401c3b31caa9d854fcf6e87d5 132 Pfam PF03899 ATP synthase I chain 16 111 5.8E-6 T 12-10-2018 IPR005598 ATP synthase protein I Vc3S01_3198 ae2a25cc4c8917ad1b9175e5b86854c0 559 SMART SM00267 365 538 2.2E-55 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_3198 ae2a25cc4c8917ad1b9175e5b86854c0 559 Gene3D G3DSA:3.30.450.40 206 372 2.7E-9 T 12-10-2018 IPR029016 GAF-like domain superfamily Vc3S01_3198 ae2a25cc4c8917ad1b9175e5b86854c0 559 SUPERFAMILY SSF55073 381 539 1.26E-46 T 12-10-2018 IPR029787 Nucleotide cyclase Vc3S01_3198 ae2a25cc4c8917ad1b9175e5b86854c0 559 Gene3D G3DSA:3.30.70.270 373 544 6.0E-55 T 12-10-2018 Vc3S01_3198 ae2a25cc4c8917ad1b9175e5b86854c0 559 SUPERFAMILY SSF55781 212 371 1.09E-11 T 12-10-2018 Vc3S01_3198 ae2a25cc4c8917ad1b9175e5b86854c0 559 Pfam PF00990 Diguanylate cyclase, GGDEF domain 377 534 7.1E-46 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_3198 ae2a25cc4c8917ad1b9175e5b86854c0 559 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 373 536 6.3E-52 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_1160 cbe385d8648e6f0dc9852fb6bcc59ac3 167 Gene3D G3DSA:1.25.40.20 44 163 7.9E-11 T 12-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily Vc3S01_1160 cbe385d8648e6f0dc9852fb6bcc59ac3 167 SUPERFAMILY SSF48403 70 134 1.48E-9 T 12-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily Vc3S01_0530 b7a6390fc6ce35c0401e231a7efb350b 208 Gene3D G3DSA:3.40.50.150 2 206 2.4E-74 T 12-10-2018 Vc3S01_0530 b7a6390fc6ce35c0401e231a7efb350b 208 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 130 145 - T 12-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 Vc3S01_0530 b7a6390fc6ce35c0401e231a7efb350b 208 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 5 206 1.6E-81 T 12-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 Vc3S01_0530 b7a6390fc6ce35c0401e231a7efb350b 208 SUPERFAMILY SSF53335 14 204 3.38E-45 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Vc3S01_0530 b7a6390fc6ce35c0401e231a7efb350b 208 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 7 204 3.0E-70 T 12-10-2018 Vc3S01_0530 b7a6390fc6ce35c0401e231a7efb350b 208 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 1 208 38.691 T 12-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 Vc3S01_1933 dead3df394aa151cb5245b257a049f61 306 Gene3D G3DSA:1.10.260.40 1 66 3.5E-14 T 12-10-2018 Vc3S01_1933 dead3df394aa151cb5245b257a049f61 306 Pfam PF01381 Helix-turn-helix 6 64 2.5E-11 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Vc3S01_1933 dead3df394aa151cb5245b257a049f61 306 SMART SM00530 5 68 1.3E-7 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Vc3S01_1933 dead3df394aa151cb5245b257a049f61 306 SUPERFAMILY SSF47413 1 70 7.04E-12 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Vc3S01_0067 020a06275f103a9b9b38a6077436e5a0 723 Gene3D G3DSA:1.10.10.160 114 187 1.2E-97 T 12-10-2018 IPR013986 DExx box DNA helicase domain superfamily Vc3S01_0067 020a06275f103a9b9b38a6077436e5a0 723 Gene3D G3DSA:3.40.50.300 10 273 1.2E-97 T 12-10-2018 Vc3S01_0067 020a06275f103a9b9b38a6077436e5a0 723 Pfam PF13361 UvrD-like helicase C-terminal domain 277 616 1.1E-78 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Vc3S01_0067 020a06275f103a9b9b38a6077436e5a0 723 SUPERFAMILY SSF52540 7 642 3.6E-180 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0067 020a06275f103a9b9b38a6077436e5a0 723 TIGRFAM TIGR01075 uvrD: DNA helicase II 6 721 0.0 T 12-10-2018 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 Vc3S01_0067 020a06275f103a9b9b38a6077436e5a0 723 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 271 4.5E-74 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 Vc3S01_0067 020a06275f103a9b9b38a6077436e5a0 723 Gene3D G3DSA:1.10.486.10 382 538 9.8E-132 T 12-10-2018 Vc3S01_0067 020a06275f103a9b9b38a6077436e5a0 723 Gene3D G3DSA:3.40.50.300 281 636 9.8E-132 T 12-10-2018 Vc3S01_A0849 fcc44fc47aa2cc89bcc78437bef8d15d 650 Pfam PF13175 AAA ATPase domain 1 60 9.4E-13 T 12-10-2018 Vc3S01_A0849 fcc44fc47aa2cc89bcc78437bef8d15d 650 Pfam PF13175 AAA ATPase domain 141 342 1.6E-22 T 12-10-2018 Vc3S01_A0849 fcc44fc47aa2cc89bcc78437bef8d15d 650 SUPERFAMILY SSF52540 1 354 9.98E-29 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A0849 fcc44fc47aa2cc89bcc78437bef8d15d 650 Gene3D G3DSA:3.40.50.300 1 365 3.7E-38 T 12-10-2018 Vc3S01_2986 14019dc445d4face6b7c75669cb744f8 910 Pfam PF06251 Capsule biosynthesis GfcC 683 883 3.6E-10 T 12-10-2018 IPR010425 Domain of unknown function DUF1017 Vc3S01_2986 14019dc445d4face6b7c75669cb744f8 910 Pfam PF10531 SLBB domain 280 323 2.7E-10 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Vc3S01_2986 14019dc445d4face6b7c75669cb744f8 910 Pfam PF10531 SLBB domain 197 245 1.1E-7 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Vc3S01_2986 14019dc445d4face6b7c75669cb744f8 910 Pfam PF10531 SLBB domain 578 621 3.2E-8 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Vc3S01_2986 14019dc445d4face6b7c75669cb744f8 910 Gene3D G3DSA:3.30.1950.10 121 188 1.2E-6 T 12-10-2018 Vc3S01_2986 14019dc445d4face6b7c75669cb744f8 910 Pfam PF02563 Polysaccharide biosynthesis/export protein 116 178 4.1E-15 T 12-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 Vc3S01_2986 14019dc445d4face6b7c75669cb744f8 910 Gene3D G3DSA:3.10.560.10 563 661 2.9E-12 T 12-10-2018 Vc3S01_2986 14019dc445d4face6b7c75669cb744f8 910 Gene3D G3DSA:3.10.560.10 357 449 9.9E-8 T 12-10-2018 Vc3S01_2986 14019dc445d4face6b7c75669cb744f8 910 Gene3D G3DSA:3.10.560.10 803 881 2.5E-10 T 12-10-2018 Vc3S01_2986 14019dc445d4face6b7c75669cb744f8 910 Gene3D G3DSA:3.10.560.10 275 356 3.8E-13 T 12-10-2018 Vc3S01_2986 14019dc445d4face6b7c75669cb744f8 910 Gene3D G3DSA:3.10.560.10 189 274 2.0E-17 T 12-10-2018 Vc3S01_2308 fc85c997c5fa1f8a89bba8244c875fab 477 SUPERFAMILY SSF56801 13 471 1.1E-83 T 12-10-2018 Vc3S01_2308 fc85c997c5fa1f8a89bba8244c875fab 477 Gene3D G3DSA:3.40.50.12780 11 373 6.4E-62 T 12-10-2018 Vc3S01_2308 fc85c997c5fa1f8a89bba8244c875fab 477 ProSitePatterns PS00455 Putative AMP-binding domain signature. 160 171 - T 12-10-2018 IPR020845 AMP-binding, conserved site Vc3S01_2308 fc85c997c5fa1f8a89bba8244c875fab 477 Pfam PF00501 AMP-binding enzyme 17 377 1.3E-47 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Vc3S01_2308 fc85c997c5fa1f8a89bba8244c875fab 477 Gene3D G3DSA:3.30.300.30 374 452 1.6E-15 T 12-10-2018 Vc3S01_2308 fc85c997c5fa1f8a89bba8244c875fab 477 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 35 465 3.6E-127 T 12-10-2018 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 Vc3S01_2091 b128b73f466bcb43d072d25ad78f5c30 342 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 175 2.5E-31 T 12-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase Vc3S01_0170 5cb1f9692b72770a88139af5f998ecfc 190 SMART SM00987 27 183 2.5E-30 T 12-10-2018 Vc3S01_0170 5cb1f9692b72770a88139af5f998ecfc 190 Pfam PF03167 Uracil DNA glycosylase superfamily 30 179 3.8E-26 T 12-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Vc3S01_0170 5cb1f9692b72770a88139af5f998ecfc 190 SUPERFAMILY SSF52141 2 189 3.6E-57 T 12-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Vc3S01_0170 5cb1f9692b72770a88139af5f998ecfc 190 SMART SM00986 27 183 2.5E-30 T 12-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Vc3S01_0170 5cb1f9692b72770a88139af5f998ecfc 190 Gene3D G3DSA:3.40.470.10 1 190 1.5E-74 T 12-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Vc3S01_A0089 74a81b4ea47f6818dbe7c665cacab6bf 94 Gene3D G3DSA:2.60.120.10 1 94 2.6E-35 T 12-10-2018 IPR014710 RmlC-like jelly roll fold Vc3S01_A0089 74a81b4ea47f6818dbe7c665cacab6bf 94 SUPERFAMILY SSF51182 3 94 8.89E-33 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily Vc3S01_A0089 74a81b4ea47f6818dbe7c665cacab6bf 94 Hamap MF_01537 Pyrimidine/purine nucleoside phosphorylase [ppnP]. 2 94 24.469 T 12-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 Vc3S01_A0089 74a81b4ea47f6818dbe7c665cacab6bf 94 Pfam PF06865 Protein of unknown function (DUF1255) 4 93 1.8E-32 T 12-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 Vc3S01_A0738 7a21e237cc0babc3c37b93f1430add2c 102 Pfam PF03927 NapD protein 6 80 5.3E-30 T 12-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly Vc3S01_A0738 7a21e237cc0babc3c37b93f1430add2c 102 Hamap MF_02200 Chaperone NapD [napD]. 6 82 19.155 T 12-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly Vc3S01_A0738 7a21e237cc0babc3c37b93f1430add2c 102 Gene3D G3DSA:3.30.70.920 6 75 8.2E-23 T 12-10-2018 Vc3S01_A0444 f3c9b545f9965e1c2a28f4d823dda948 236 SUPERFAMILY SSF53167 3 234 9.56E-92 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 Vc3S01_A0444 f3c9b545f9965e1c2a28f4d823dda948 236 Pfam PF01048 Phosphorylase superfamily 17 222 2.1E-34 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 Vc3S01_A0444 f3c9b545f9965e1c2a28f4d823dda948 236 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 233 5.7E-113 T 12-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 Vc3S01_A0444 f3c9b545f9965e1c2a28f4d823dda948 236 Gene3D G3DSA:3.40.50.1580 1 236 8.0E-76 T 12-10-2018 Vc3S01_A0444 f3c9b545f9965e1c2a28f4d823dda948 236 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 51.853 T 12-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 Vc3S01_0087 384a2246d029fcb8def9d49644a5e943 393 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 3 386 4.7E-112 T 12-10-2018 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 Vc3S01_0087 384a2246d029fcb8def9d49644a5e943 393 Gene3D G3DSA:1.25.40.10 205 393 2.1E-12 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_0087 384a2246d029fcb8def9d49644a5e943 393 SUPERFAMILY SSF48452 260 393 1.93E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_0087 384a2246d029fcb8def9d49644a5e943 393 SUPERFAMILY SSF48452 85 293 1.39E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_0087 384a2246d029fcb8def9d49644a5e943 393 Pfam PF07219 HemY protein N-terminus 26 132 3.0E-27 T 12-10-2018 IPR010817 HemY, N-terminal Vc3S01_1234 a02ff0339378a1786d925b1e810a5219 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 273 293 8.0E-66 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Vc3S01_1234 a02ff0339378a1786d925b1e810a5219 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 209 235 8.0E-66 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Vc3S01_1234 a02ff0339378a1786d925b1e810a5219 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 293 309 8.0E-66 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Vc3S01_1234 a02ff0339378a1786d925b1e810a5219 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 131 148 8.0E-66 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Vc3S01_1234 a02ff0339378a1786d925b1e810a5219 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 243 263 8.0E-66 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Vc3S01_1234 a02ff0339378a1786d925b1e810a5219 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 8.0E-66 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Vc3S01_1234 a02ff0339378a1786d925b1e810a5219 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 158 180 8.0E-66 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Vc3S01_1234 a02ff0339378a1786d925b1e810a5219 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 309 328 8.0E-66 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Vc3S01_1234 a02ff0339378a1786d925b1e810a5219 635 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 315 330 7.7E-5 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Vc3S01_1234 a02ff0339378a1786d925b1e810a5219 635 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 393 412 7.7E-5 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Vc3S01_1234 a02ff0339378a1786d925b1e810a5219 635 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 188 203 7.7E-5 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Vc3S01_1234 a02ff0339378a1786d925b1e810a5219 635 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 350 367 7.7E-5 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Vc3S01_1234 a02ff0339378a1786d925b1e810a5219 635 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 7.7E-5 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Vc3S01_1234 a02ff0339378a1786d925b1e810a5219 635 Pfam PF01578 Cytochrome C assembly protein 89 295 3.2E-39 T 12-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 Vc3S01_1234 a02ff0339378a1786d925b1e810a5219 635 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 318 618 9.9E-62 T 12-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal Vc3S01_2331 2c2b09bb46a60c00b345e62896aad2d1 331 PIRSF PIRSF006470 1 331 1.8E-124 T 12-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 Vc3S01_2331 2c2b09bb46a60c00b345e62896aad2d1 331 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 33 278 4.2E-80 T 12-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 Vc3S01_2331 2c2b09bb46a60c00b345e62896aad2d1 331 Gene3D G3DSA:3.40.190.170 27 328 1.1E-89 T 12-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily Vc3S01_2331 2c2b09bb46a60c00b345e62896aad2d1 331 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 33 317 2.1E-103 T 12-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 Vc3S01_2221 c5a900a5bcaf0bc4babda10120220f37 229 Pfam PF09335 SNARE associated Golgi protein 65 181 3.4E-23 T 12-10-2018 IPR032816 SNARE associated Golgi protein Vc3S01_2788 504103413ea44ef387e8c1b8d048fdc1 122 SUPERFAMILY SSF52980 7 112 1.39E-22 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Vc3S01_2788 504103413ea44ef387e8c1b8d048fdc1 122 Gene3D G3DSA:3.40.1350.10 13 122 2.2E-32 T 12-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 Vc3S01_2788 504103413ea44ef387e8c1b8d048fdc1 122 Hamap MF_00048 UPF0102 protein YraN [yraN]. 6 118 24.398 T 12-10-2018 IPR003509 Uncharacterised protein family UPF0102 Vc3S01_2788 504103413ea44ef387e8c1b8d048fdc1 122 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 7 120 5.2E-36 T 12-10-2018 IPR003509 Uncharacterised protein family UPF0102 Vc3S01_2788 504103413ea44ef387e8c1b8d048fdc1 122 Pfam PF02021 Uncharacterised protein family UPF0102 13 105 2.0E-28 T 12-10-2018 IPR003509 Uncharacterised protein family UPF0102 Vc3S01_A0195 6a5371c80da7f1d0937d89b2f542b50e 251 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_A0195 6a5371c80da7f1d0937d89b2f542b50e 251 SUPERFAMILY SSF52540 12 212 6.41E-51 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A0195 6a5371c80da7f1d0937d89b2f542b50e 251 SMART SM00382 34 213 2.5E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_A0195 6a5371c80da7f1d0937d89b2f542b50e 251 Gene3D G3DSA:3.40.50.300 7 229 9.7E-56 T 12-10-2018 Vc3S01_A0195 6a5371c80da7f1d0937d89b2f542b50e 251 Pfam PF00005 ABC transporter 26 166 4.4E-26 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_0821 7e00a43dacb1e72e855eabaa39f4b281 116 Gene3D G3DSA:3.40.30.10 1 116 4.8E-48 T 12-10-2018 Vc3S01_0821 7e00a43dacb1e72e855eabaa39f4b281 116 Pfam PF03960 ArsC family 6 115 5.0E-19 T 12-10-2018 IPR006660 Arsenate reductase-like Vc3S01_0821 7e00a43dacb1e72e855eabaa39f4b281 116 SUPERFAMILY SSF52833 2 116 3.01E-35 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Vc3S01_0821 7e00a43dacb1e72e855eabaa39f4b281 116 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 3 116 3.0E-47 T 12-10-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 Vc3S01_0097 053dd2efa074a3a7f0c44894c01bce4f 313 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 15 304 54.762 T 12-10-2018 IPR023009 Tyrosine recombinase XerC/XerD Vc3S01_0097 053dd2efa074a3a7f0c44894c01bce4f 313 Gene3D G3DSA:1.10.150.130 14 108 4.1E-17 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal Vc3S01_0097 053dd2efa074a3a7f0c44894c01bce4f 313 SUPERFAMILY SSF56349 116 302 1.62E-52 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Vc3S01_0097 053dd2efa074a3a7f0c44894c01bce4f 313 SUPERFAMILY SSF47823 16 107 5.3E-12 T 12-10-2018 Vc3S01_0097 053dd2efa074a3a7f0c44894c01bce4f 313 Gene3D G3DSA:1.10.443.10 121 298 1.7E-56 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Vc3S01_0097 053dd2efa074a3a7f0c44894c01bce4f 313 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 18 306 3.6E-108 T 12-10-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007059|GO:0015074|GO:0051301 Vc3S01_0097 053dd2efa074a3a7f0c44894c01bce4f 313 Pfam PF00589 Phage integrase family 122 290 1.6E-48 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Vc3S01_0097 053dd2efa074a3a7f0c44894c01bce4f 313 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 17 100 8.1E-20 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 Vc3S01_A0339 8459cd59aa41322a1ec9ffe84a09b4b1 254 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 54 67 - T 12-10-2018 IPR018313 Solute-binding protein family 3, conserved site Vc3S01_A0339 8459cd59aa41322a1ec9ffe84a09b4b1 254 SMART SM00062 32 251 6.0E-32 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Vc3S01_A0339 8459cd59aa41322a1ec9ffe84a09b4b1 254 SUPERFAMILY SSF53850 1 243 4.66E-50 T 12-10-2018 Vc3S01_A0339 8459cd59aa41322a1ec9ffe84a09b4b1 254 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 33 242 1.0E-41 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Vc3S01_A0339 8459cd59aa41322a1ec9ffe84a09b4b1 254 Gene3D G3DSA:3.40.190.10 24 241 1.5E-61 T 12-10-2018 Vc3S01_A0339 8459cd59aa41322a1ec9ffe84a09b4b1 254 Gene3D G3DSA:3.40.190.10 118 209 1.5E-61 T 12-10-2018 Vc3S01_0912 f1be5ddbccc63165fba8af4e3d122d9b 337 SUPERFAMILY SSF55347 131 320 1.04E-77 T 12-10-2018 Vc3S01_0912 f1be5ddbccc63165fba8af4e3d122d9b 337 Gene3D G3DSA:3.40.50.720 7 330 9.2E-152 T 12-10-2018 Vc3S01_0912 f1be5ddbccc63165fba8af4e3d122d9b 337 SMART SM00859 6 121 4.2E-41 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Vc3S01_0912 f1be5ddbccc63165fba8af4e3d122d9b 337 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 120 6.3E-32 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Vc3S01_0912 f1be5ddbccc63165fba8af4e3d122d9b 337 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 4 333 36.383 T 12-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Vc3S01_0912 f1be5ddbccc63165fba8af4e3d122d9b 337 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 232 246 - T 12-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Vc3S01_0912 f1be5ddbccc63165fba8af4e3d122d9b 337 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 6 334 3.1E-129 T 12-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Vc3S01_0912 f1be5ddbccc63165fba8af4e3d122d9b 337 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 319 3.6E-61 T 12-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Vc3S01_0912 f1be5ddbccc63165fba8af4e3d122d9b 337 PIRSF PIRSF000148 4 337 2.1E-133 T 12-10-2018 Vc3S01_0912 f1be5ddbccc63165fba8af4e3d122d9b 337 Gene3D G3DSA:3.30.360.10 130 316 9.2E-152 T 12-10-2018 Vc3S01_0912 f1be5ddbccc63165fba8af4e3d122d9b 337 SUPERFAMILY SSF51735 5 159 2.15E-51 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_2812 fd20f2db4f1f31e6b9276eac45fbe038 272 SUPERFAMILY SSF81324 28 225 1.14E-48 T 12-10-2018 Vc3S01_2812 fd20f2db4f1f31e6b9276eac45fbe038 272 Pfam PF00520 Ion transport protein 35 225 8.5E-16 T 12-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 Vc3S01_2812 fd20f2db4f1f31e6b9276eac45fbe038 272 PRINTS PR00169 Potassium channel signature 138 161 1.0E-8 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 Vc3S01_2812 fd20f2db4f1f31e6b9276eac45fbe038 272 PRINTS PR00169 Potassium channel signature 198 224 1.0E-8 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 Vc3S01_2812 fd20f2db4f1f31e6b9276eac45fbe038 272 PRINTS PR00169 Potassium channel signature 169 191 1.0E-8 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 Vc3S01_2812 fd20f2db4f1f31e6b9276eac45fbe038 272 Gene3D G3DSA:1.10.287.70 141 239 3.0E-24 T 12-10-2018 Vc3S01_2812 fd20f2db4f1f31e6b9276eac45fbe038 272 Gene3D G3DSA:1.20.120.350 24 140 2.0E-16 T 12-10-2018 IPR027359 Voltage-dependent channel domain superfamily Vc3S01_2389 c45ff96f061ad0d6bdd20a4e2823a2db 75 SMART SM00899 1 74 1.7E-23 T 12-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 Vc3S01_2389 c45ff96f061ad0d6bdd20a4e2823a2db 75 SUPERFAMILY SSF50037 4 74 1.17E-18 T 12-10-2018 IPR008988 Transcriptional repressor, C-terminal Vc3S01_2389 c45ff96f061ad0d6bdd20a4e2823a2db 75 Gene3D G3DSA:2.30.30.90 1 75 8.0E-24 T 12-10-2018 IPR038157 Ferrous iron transporter, core domain Vc3S01_2389 c45ff96f061ad0d6bdd20a4e2823a2db 75 Pfam PF04023 FeoA domain 1 74 2.4E-19 T 12-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 Vc3S01_A2028 b2214cc641241ab6f81d1e1589eed0c9 497 Gene3D G3DSA:1.20.1730.10 12 495 1.7E-95 T 12-10-2018 IPR038377 Sodium/glucose symporter superfamily Vc3S01_A2028 b2214cc641241ab6f81d1e1589eed0c9 497 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 36 437 1.9E-94 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Vc3S01_A2028 b2214cc641241ab6f81d1e1589eed0c9 497 Pfam PF00474 Sodium:solute symporter family 36 437 1.4E-105 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Vc3S01_A2028 b2214cc641241ab6f81d1e1589eed0c9 497 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 7 489 2.9E-217 T 12-10-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 Vc3S01_0601 6a41cef0794613d9b69d1fa478d6bf31 327 SMART SM00382 34 231 1.9E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_0601 6a41cef0794613d9b69d1fa478d6bf31 327 Pfam PF00005 ABC transporter 26 181 6.9E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_0601 6a41cef0794613d9b69d1fa478d6bf31 327 Gene3D G3DSA:3.40.50.300 3 326 3.5E-90 T 12-10-2018 Vc3S01_0601 6a41cef0794613d9b69d1fa478d6bf31 327 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 1.2E-17 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Vc3S01_0601 6a41cef0794613d9b69d1fa478d6bf31 327 SUPERFAMILY SSF52540 5 252 1.12E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0601 6a41cef0794613d9b69d1fa478d6bf31 327 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_0601 6a41cef0794613d9b69d1fa478d6bf31 327 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 317 1.5E-22 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Vc3S01_A0698 fa90500876256efb63adccb2fe912c57 78 Pfam PF10948 Protein of unknown function (DUF2635) 17 50 2.0E-12 T 12-10-2018 IPR024400 Protein of unknown function DUF2635 Vc3S01_A0698 fa90500876256efb63adccb2fe912c57 78 ProDom PD027295 GP38 FLUMU BACTERIOPHAGE MU-LIKE ECS4978 SB12 PHAGE ORF10 PROPHAGE 9 49 0.002 T 12-10-2018 IPR024400 Protein of unknown function DUF2635 Vc3S01_2363 ba17136000fd2229433489d03b1954f0 286 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 37.901 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Vc3S01_2363 ba17136000fd2229433489d03b1954f0 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 3.6E-89 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Vc3S01_2363 ba17136000fd2229433489d03b1954f0 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 3.6E-89 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Vc3S01_2363 ba17136000fd2229433489d03b1954f0 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 3.6E-89 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Vc3S01_2363 ba17136000fd2229433489d03b1954f0 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 3.6E-89 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Vc3S01_2363 ba17136000fd2229433489d03b1954f0 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 3.6E-89 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Vc3S01_2363 ba17136000fd2229433489d03b1954f0 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 3.6E-89 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Vc3S01_2363 ba17136000fd2229433489d03b1954f0 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 3.6E-89 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Vc3S01_2363 ba17136000fd2229433489d03b1954f0 286 SUPERFAMILY SSF51735 123 280 1.32E-51 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_2363 ba17136000fd2229433489d03b1954f0 286 Gene3D G3DSA:3.40.50.720 6 259 2.2E-107 T 12-10-2018 Vc3S01_2363 ba17136000fd2229433489d03b1954f0 286 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 6 121 1.1E-38 T 12-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Vc3S01_2363 ba17136000fd2229433489d03b1954f0 286 Gene3D G3DSA:3.40.50.10860 8 276 2.2E-107 T 12-10-2018 Vc3S01_2363 ba17136000fd2229433489d03b1954f0 286 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 12-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Vc3S01_2363 ba17136000fd2229433489d03b1954f0 286 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 12-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Vc3S01_2363 ba17136000fd2229433489d03b1954f0 286 SUPERFAMILY SSF53223 1 122 9.4E-40 T 12-10-2018 Vc3S01_2363 ba17136000fd2229433489d03b1954f0 286 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 281 8.4E-69 T 12-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Vc3S01_2239 d9775bf401b7ab38eb46ee389b4b44c5 341 SUPERFAMILY SSF56935 20 340 7.63E-38 T 12-10-2018 Vc3S01_2239 d9775bf401b7ab38eb46ee389b4b44c5 341 Pfam PF13609 Gram-negative porin 7 316 3.7E-19 T 12-10-2018 Vc3S01_2239 d9775bf401b7ab38eb46ee389b4b44c5 341 Gene3D G3DSA:2.40.160.10 20 341 7.3E-36 T 12-10-2018 IPR023614 Porin domain superfamily Vc3S01_A0189 c9542747c977d927d600d68b443aef00 241 SUPERFAMILY SSF48317 27 225 5.76E-20 T 12-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily Vc3S01_A0189 c9542747c977d927d600d68b443aef00 241 SMART SM00014 77 225 2.6E-10 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Vc3S01_A0189 c9542747c977d927d600d68b443aef00 241 Gene3D G3DSA:1.20.144.10 5 236 6.4E-46 T 12-10-2018 Vc3S01_A0189 c9542747c977d927d600d68b443aef00 241 Pfam PF01569 PAP2 superfamily 83 229 2.4E-18 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Vc3S01_0060 8267ecc976a1c4e067d86d9e8b18f619 323 Gene3D G3DSA:1.10.10.10 11 99 5.9E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_0060 8267ecc976a1c4e067d86d9e8b18f619 323 SUPERFAMILY SSF53850 102 316 3.88E-48 T 12-10-2018 Vc3S01_0060 8267ecc976a1c4e067d86d9e8b18f619 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 57 68 2.0E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_0060 8267ecc976a1c4e067d86d9e8b18f619 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 47 2.0E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_0060 8267ecc976a1c4e067d86d9e8b18f619 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 57 2.0E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_0060 8267ecc976a1c4e067d86d9e8b18f619 323 Pfam PF03466 LysR substrate binding domain 107 318 3.6E-30 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_0060 8267ecc976a1c4e067d86d9e8b18f619 323 Gene3D G3DSA:3.40.190.10 192 290 2.4E-59 T 12-10-2018 Vc3S01_0060 8267ecc976a1c4e067d86d9e8b18f619 323 SUPERFAMILY SSF46785 17 96 3.76E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_0060 8267ecc976a1c4e067d86d9e8b18f619 323 Gene3D G3DSA:3.40.190.10 102 315 2.4E-59 T 12-10-2018 Vc3S01_0060 8267ecc976a1c4e067d86d9e8b18f619 323 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 21 79 4.6E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_1866 c73c018faef237dc30165174aac1473c 254 Pfam PF00975 Thioesterase domain 17 239 1.8E-44 T 12-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 Vc3S01_1866 c73c018faef237dc30165174aac1473c 254 Gene3D G3DSA:3.40.50.1820 6 241 1.0E-43 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_1866 c73c018faef237dc30165174aac1473c 254 SUPERFAMILY SSF53474 15 243 2.98E-34 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_1275 2a7464fa4bcf16460bd0b9d9c4117b72 417 Pfam PF03222 Tryptophan/tyrosine permease family 29 381 1.1E-18 T 12-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 Vc3S01_0893 bf50c56ff028f5b16bbc9f47a5e90900 151 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 1 139 1.2E-19 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Vc3S01_0893 bf50c56ff028f5b16bbc9f47a5e90900 151 SUPERFAMILY SSF88946 1 69 5.49E-17 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Vc3S01_0893 bf50c56ff028f5b16bbc9f47a5e90900 151 Pfam PF08281 Sigma-70, region 4 83 135 1.7E-9 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Vc3S01_0893 bf50c56ff028f5b16bbc9f47a5e90900 151 SUPERFAMILY SSF88659 80 140 2.43E-12 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Vc3S01_0893 bf50c56ff028f5b16bbc9f47a5e90900 151 Pfam PF04542 Sigma-70 region 2 1 59 3.5E-15 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Vc3S01_0893 bf50c56ff028f5b16bbc9f47a5e90900 151 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 15 46 - T 12-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Vc3S01_0893 bf50c56ff028f5b16bbc9f47a5e90900 151 Gene3D G3DSA:1.10.10.10 78 141 1.5E-14 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_0893 bf50c56ff028f5b16bbc9f47a5e90900 151 Gene3D G3DSA:1.10.1740.10 1 61 1.2E-15 T 12-10-2018 Vc3S01_1044 18c627abf5a87f9551f37ccaec7c4806 495 TIGRFAM TIGR03395 sphingomy: sphingomyelin phosphodiesterase 27 313 4.6E-89 T 12-10-2018 IPR017766 Sphingomyelinase C/phospholipase C GO:0005576|GO:0008081 Vc3S01_1044 18c627abf5a87f9551f37ccaec7c4806 495 SUPERFAMILY SSF56219 27 312 8.92E-64 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Vc3S01_1044 18c627abf5a87f9551f37ccaec7c4806 495 Gene3D G3DSA:3.60.10.10 20 315 7.7E-74 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Vc3S01_1044 18c627abf5a87f9551f37ccaec7c4806 495 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 29 270 2.7E-12 T 12-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase Vc3S01_0701 70ec1ca532325f4bde3e6221876b82f7 585 Gene3D G3DSA:3.40.190.10 121 380 6.3E-26 T 12-10-2018 Vc3S01_0701 70ec1ca532325f4bde3e6221876b82f7 585 SUPERFAMILY SSF53850 126 585 1.21E-51 T 12-10-2018 Vc3S01_0701 70ec1ca532325f4bde3e6221876b82f7 585 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 163 369 1.2E-15 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain Vc3S01_0701 70ec1ca532325f4bde3e6221876b82f7 585 Pfam PF12793 Sugar transport-related sRNA regulator N-term 7 118 2.4E-25 T 12-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain Vc3S01_2694 cf646a37a1a4c65604d3e99f26d0126f 375 Gene3D G3DSA:1.10.3660.10 248 373 2.0E-49 T 12-10-2018 Vc3S01_2694 cf646a37a1a4c65604d3e99f26d0126f 375 SUPERFAMILY SSF48179 241 366 1.93E-41 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Vc3S01_2694 cf646a37a1a4c65604d3e99f26d0126f 375 SMART SM00830 9 89 3.2E-29 T 12-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Vc3S01_2694 cf646a37a1a4c65604d3e99f26d0126f 375 Gene3D G3DSA:1.20.59.10 1 80 2.7E-17 T 12-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Vc3S01_2694 cf646a37a1a4c65604d3e99f26d0126f 375 Pfam PF02153 Prephenate dehydrogenase 136 344 2.7E-32 T 12-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 Vc3S01_2694 cf646a37a1a4c65604d3e99f26d0126f 375 Pfam PF01817 Chorismate mutase type II 9 87 2.1E-21 T 12-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Vc3S01_2694 cf646a37a1a4c65604d3e99f26d0126f 375 Gene3D G3DSA:3.40.50.720 81 247 1.8E-43 T 12-10-2018 Vc3S01_2694 cf646a37a1a4c65604d3e99f26d0126f 375 SUPERFAMILY SSF51735 91 237 1.81E-37 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_2694 cf646a37a1a4c65604d3e99f26d0126f 375 SUPERFAMILY SSF48600 4 88 6.78E-24 T 12-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Vc3S01_2694 cf646a37a1a4c65604d3e99f26d0126f 375 PIRSF PIRSF001499 1 374 1.3E-186 T 12-10-2018 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein GO:0004106|GO:0005737|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 Vc3S01_2694 cf646a37a1a4c65604d3e99f26d0126f 375 TIGRFAM TIGR01799 CM_T: chorismate mutase 5 87 3.9E-42 T 12-10-2018 IPR011277 Chorismate mutase, T-protein GO:0004106|GO:0005737|GO:0006571|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 Vc3S01_1854 6b103edba870ac27759a19620531b593 391 SUPERFAMILY SSF52440 2 110 1.87E-34 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Vc3S01_1854 6b103edba870ac27759a19620531b593 391 Gene3D G3DSA:3.40.50.20 1 120 9.0E-54 T 12-10-2018 Vc3S01_1854 6b103edba870ac27759a19620531b593 391 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 12 389 2.6E-192 T 12-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 Vc3S01_1854 6b103edba870ac27759a19620531b593 391 Gene3D G3DSA:3.30.1490.20 121 194 2.3E-34 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Vc3S01_1854 6b103edba870ac27759a19620531b593 391 Gene3D G3DSA:3.30.470.20 195 389 8.1E-60 T 12-10-2018 Vc3S01_1854 6b103edba870ac27759a19620531b593 391 SUPERFAMILY SSF56059 111 313 4.07E-58 T 12-10-2018 Vc3S01_1854 6b103edba870ac27759a19620531b593 391 Hamap MF_01643 Formate-dependent phosphoribosylglycinamide formyltransferase [purT]. 6 390 52.069 T 12-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 Vc3S01_1854 6b103edba870ac27759a19620531b593 391 Pfam PF02222 ATP-grasp domain 121 293 4.8E-59 T 12-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type Vc3S01_1854 6b103edba870ac27759a19620531b593 391 SUPERFAMILY SSF51246 317 389 5.96E-17 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Vc3S01_p30005 897a1bd7370b318b6b9909ee715aa308 180 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 18 138 2.6E-14 T 12-10-2018 IPR010319 Transglutaminase-like cysteine peptidase, predicted Vc3S01_p30005 897a1bd7370b318b6b9909ee715aa308 180 Gene3D G3DSA:3.10.620.30 7 162 6.4E-41 T 12-10-2018 Vc3S01_A1734 5d46f570ebb2ccc7f889e6a2e17e1d7c 169 Gene3D G3DSA:2.40.128.640 61 168 2.5E-40 T 12-10-2018 Vc3S01_A1734 5d46f570ebb2ccc7f889e6a2e17e1d7c 169 Pfam PF04170 NlpE N-terminal domain 74 158 3.5E-29 T 12-10-2018 IPR007298 Copper resistance lipoprotein NlpE Vc3S01_2317 c65b674a07d0910e6ae8ad43950c0647 205 SMART SM01144 1 193 1.7E-67 T 12-10-2018 IPR005636 DTW Vc3S01_2317 c65b674a07d0910e6ae8ad43950c0647 205 Pfam PF03942 DTW domain 3 188 2.5E-49 T 12-10-2018 IPR005636 DTW Vc3S01_2147 2a0ac9c19941efe354e8d72ed3cfe263 321 TIGRFAM TIGR02551 SpaO_YscQ: type III secretion apparatus protein, YscQ/HrcQ family 38 313 1.2E-59 T 12-10-2018 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO GO:0030254 Vc3S01_2147 2a0ac9c19941efe354e8d72ed3cfe263 321 SUPERFAMILY SSF101801 242 318 1.22E-17 T 12-10-2018 IPR036429 SpoA-like superfamily Vc3S01_2147 2a0ac9c19941efe354e8d72ed3cfe263 321 PRINTS PR01339 Type III secretion system outer membrane O protein family signature 184 194 3.0E-7 T 12-10-2018 IPR003283 Type III secretion system outer membrane, SpaO GO:0009306 Vc3S01_2147 2a0ac9c19941efe354e8d72ed3cfe263 321 PRINTS PR01339 Type III secretion system outer membrane O protein family signature 246 258 3.0E-7 T 12-10-2018 IPR003283 Type III secretion system outer membrane, SpaO GO:0009306 Vc3S01_2147 2a0ac9c19941efe354e8d72ed3cfe263 321 PRINTS PR01339 Type III secretion system outer membrane O protein family signature 290 307 3.0E-7 T 12-10-2018 IPR003283 Type III secretion system outer membrane, SpaO GO:0009306 Vc3S01_2147 2a0ac9c19941efe354e8d72ed3cfe263 321 Gene3D G3DSA:2.30.330.10 230 317 2.9E-25 T 12-10-2018 IPR036429 SpoA-like superfamily Vc3S01_2147 2a0ac9c19941efe354e8d72ed3cfe263 321 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 246 313 1.4E-18 T 12-10-2018 IPR001543 Surface presentation of antigen (SpoA) Vc3S01_2147 2a0ac9c19941efe354e8d72ed3cfe263 321 SUPERFAMILY SSF101801 163 223 5.36E-7 T 12-10-2018 IPR036429 SpoA-like superfamily Vc3S01_1479 f910db32614ba137c2720ddc8359b1a0 339 Pfam PF01117 Aerolysin toxin 13 295 5.5E-76 T 12-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 Vc3S01_1479 f910db32614ba137c2720ddc8359b1a0 339 Gene3D G3DSA:3.30.412.10 14 267 1.2E-97 T 12-10-2018 Vc3S01_1479 f910db32614ba137c2720ddc8359b1a0 339 Gene3D G3DSA:2.170.15.10 48 290 1.2E-97 T 12-10-2018 Vc3S01_1479 f910db32614ba137c2720ddc8359b1a0 339 PRINTS PR00754 Aerolysin signature 251 269 7.4E-33 T 12-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 Vc3S01_1479 f910db32614ba137c2720ddc8359b1a0 339 PRINTS PR00754 Aerolysin signature 184 207 7.4E-33 T 12-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 Vc3S01_1479 f910db32614ba137c2720ddc8359b1a0 339 PRINTS PR00754 Aerolysin signature 229 248 7.4E-33 T 12-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 Vc3S01_1479 f910db32614ba137c2720ddc8359b1a0 339 PRINTS PR00754 Aerolysin signature 112 136 7.4E-33 T 12-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 Vc3S01_1479 f910db32614ba137c2720ddc8359b1a0 339 PRINTS PR00754 Aerolysin signature 270 289 7.4E-33 T 12-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 Vc3S01_1479 f910db32614ba137c2720ddc8359b1a0 339 SUPERFAMILY SSF56973 12 293 2.09E-57 T 12-10-2018 Vc3S01_1479 f910db32614ba137c2720ddc8359b1a0 339 SMART SM00999 1 325 2.7E-216 T 12-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 Vc3S01_A0065 46323b01dfa0d37c4e61e32d827035d8 281 Pfam PF12833 Helix-turn-helix domain 185 262 1.4E-16 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_A0065 46323b01dfa0d37c4e61e32d827035d8 281 SMART SM00342 179 261 7.4E-27 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_A0065 46323b01dfa0d37c4e61e32d827035d8 281 Gene3D G3DSA:1.10.10.60 159 273 5.7E-27 T 12-10-2018 Vc3S01_A0065 46323b01dfa0d37c4e61e32d827035d8 281 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 230 245 2.1E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Vc3S01_A0065 46323b01dfa0d37c4e61e32d827035d8 281 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 245 261 2.1E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Vc3S01_A0065 46323b01dfa0d37c4e61e32d827035d8 281 SUPERFAMILY SSF46689 214 263 1.08E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_1074 bba3f63556d89bc2272cb67e5528bdf5 178 Gene3D G3DSA:1.20.1550.10 3 177 2.1E-60 T 12-10-2018 IPR023380 DsbB-like superfamily Vc3S01_1074 bba3f63556d89bc2272cb67e5528bdf5 178 SUPERFAMILY SSF158442 17 163 1.01E-44 T 12-10-2018 IPR023380 DsbB-like superfamily Vc3S01_1074 bba3f63556d89bc2272cb67e5528bdf5 178 Pfam PF02600 Disulfide bond formation protein DsbB 14 162 1.2E-43 T 12-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 Vc3S01_1074 bba3f63556d89bc2272cb67e5528bdf5 178 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 9 170 22.692 T 12-10-2018 IPR022920 Disulphide bond formation protein DsbB Vc3S01_0579 da93c142d8858554163f6cbd8394eab8 264 Pfam PF02548 Ketopantoate hydroxymethyltransferase 3 258 9.5E-108 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 Vc3S01_0579 da93c142d8858554163f6cbd8394eab8 264 SUPERFAMILY SSF51621 3 262 2.33E-105 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Vc3S01_0579 da93c142d8858554163f6cbd8394eab8 264 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 262 3.0E-115 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 Vc3S01_0579 da93c142d8858554163f6cbd8394eab8 264 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 263 41.231 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 Vc3S01_0579 da93c142d8858554163f6cbd8394eab8 264 PIRSF PIRSF000388 1 264 3.4E-101 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 Vc3S01_0579 da93c142d8858554163f6cbd8394eab8 264 Gene3D G3DSA:3.20.20.60 1 263 1.8E-105 T 12-10-2018 Vc3S01_2502 3b9ecf2a6a84f00279b89a70b9ca68b2 127 PIRSF PIRSF005610 1 121 1.3E-19 T 12-10-2018 IPR007360 Invasion gene expression up-regulator, SirB Vc3S01_2502 3b9ecf2a6a84f00279b89a70b9ca68b2 127 Pfam PF04247 Invasion gene expression up-regulator, SirB 2 123 2.9E-40 T 12-10-2018 IPR007360 Invasion gene expression up-regulator, SirB Vc3S01_0843 b28de394b62f6e8e62502621903b11c5 377 Pfam PF00700 Bacterial flagellin C-terminal helical region 292 376 5.7E-26 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Vc3S01_0843 b28de394b62f6e8e62502621903b11c5 377 PRINTS PR00207 Flagellin signature 37 54 2.5E-27 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Vc3S01_0843 b28de394b62f6e8e62502621903b11c5 377 PRINTS PR00207 Flagellin signature 111 134 2.5E-27 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Vc3S01_0843 b28de394b62f6e8e62502621903b11c5 377 PRINTS PR00207 Flagellin signature 76 95 2.5E-27 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Vc3S01_0843 b28de394b62f6e8e62502621903b11c5 377 Gene3D G3DSA:3.30.70.2120 174 275 7.0E-76 T 12-10-2018 Vc3S01_0843 b28de394b62f6e8e62502621903b11c5 377 Pfam PF07196 Flagellin hook IN motif 195 249 3.1E-11 T 12-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 Vc3S01_0843 b28de394b62f6e8e62502621903b11c5 377 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 6.5E-42 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Vc3S01_0843 b28de394b62f6e8e62502621903b11c5 377 SUPERFAMILY SSF64518 1 376 6.8E-97 T 12-10-2018 Vc3S01_0843 b28de394b62f6e8e62502621903b11c5 377 Gene3D G3DSA:1.20.1330.10 44 327 7.0E-76 T 12-10-2018 Vc3S01_0843 b28de394b62f6e8e62502621903b11c5 377 Gene3D G3DSA:1.10.8.410 328 376 1.9E-20 T 12-10-2018 Vc3S01_2460 b28de394b62f6e8e62502621903b11c5 377 Pfam PF00700 Bacterial flagellin C-terminal helical region 292 376 5.7E-26 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Vc3S01_2460 b28de394b62f6e8e62502621903b11c5 377 PRINTS PR00207 Flagellin signature 37 54 2.5E-27 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Vc3S01_2460 b28de394b62f6e8e62502621903b11c5 377 PRINTS PR00207 Flagellin signature 111 134 2.5E-27 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Vc3S01_2460 b28de394b62f6e8e62502621903b11c5 377 PRINTS PR00207 Flagellin signature 76 95 2.5E-27 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Vc3S01_2460 b28de394b62f6e8e62502621903b11c5 377 Gene3D G3DSA:3.30.70.2120 174 275 7.0E-76 T 12-10-2018 Vc3S01_2460 b28de394b62f6e8e62502621903b11c5 377 Pfam PF07196 Flagellin hook IN motif 195 249 3.1E-11 T 12-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 Vc3S01_2460 b28de394b62f6e8e62502621903b11c5 377 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 6.5E-42 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Vc3S01_2460 b28de394b62f6e8e62502621903b11c5 377 SUPERFAMILY SSF64518 1 376 6.8E-97 T 12-10-2018 Vc3S01_2460 b28de394b62f6e8e62502621903b11c5 377 Gene3D G3DSA:1.20.1330.10 44 327 7.0E-76 T 12-10-2018 Vc3S01_2460 b28de394b62f6e8e62502621903b11c5 377 Gene3D G3DSA:1.10.8.410 328 376 1.9E-20 T 12-10-2018 Vc3S01_1833 e307a0f8b8478963176bc5ae8cdcfd57 403 Pfam PF07690 Major Facilitator Superfamily 16 352 4.2E-35 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Vc3S01_1833 e307a0f8b8478963176bc5ae8cdcfd57 403 Gene3D G3DSA:1.20.1250.20 5 390 9.3E-45 T 12-10-2018 Vc3S01_1833 e307a0f8b8478963176bc5ae8cdcfd57 403 SUPERFAMILY SSF103473 9 395 2.22E-53 T 12-10-2018 IPR036259 MFS transporter superfamily Vc3S01_1833 e307a0f8b8478963176bc5ae8cdcfd57 403 ProSitePatterns PS00216 Sugar transport proteins signature 1. 66 82 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Vc3S01_A1874 f1b182a400f42d1e023f6d050b06ba57 275 Pfam PF01261 Xylose isomerase-like TIM barrel 20 208 1.4E-25 T 12-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain Vc3S01_A1874 f1b182a400f42d1e023f6d050b06ba57 275 SUPERFAMILY SSF51658 1 275 2.76E-58 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily Vc3S01_A1874 f1b182a400f42d1e023f6d050b06ba57 275 Gene3D G3DSA:3.20.20.150 4 275 2.7E-52 T 12-10-2018 Vc3S01_1101 59ba1ea0360390dd7243211b72dadd26 255 Pfam PF01026 TatD related DNase 3 253 4.4E-79 T 12-10-2018 IPR001130 TatD family GO:0016788 Vc3S01_1101 59ba1ea0360390dd7243211b72dadd26 255 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 12-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 Vc3S01_1101 59ba1ea0360390dd7243211b72dadd26 255 SUPERFAMILY SSF51556 1 253 3.6E-89 T 12-10-2018 IPR032466 Metal-dependent hydrolase Vc3S01_1101 59ba1ea0360390dd7243211b72dadd26 255 Gene3D G3DSA:3.20.20.140 1 255 5.7E-101 T 12-10-2018 Vc3S01_1101 59ba1ea0360390dd7243211b72dadd26 255 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 125 135 - T 12-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 Vc3S01_1101 59ba1ea0360390dd7243211b72dadd26 255 PIRSF PIRSF005902 1 255 1.5E-82 T 12-10-2018 IPR001130 TatD family GO:0016788 Vc3S01_1101 59ba1ea0360390dd7243211b72dadd26 255 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 12-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 Vc3S01_1101 59ba1ea0360390dd7243211b72dadd26 255 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 253 1.3E-94 T 12-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 Vc3S01_2134 6e694259869439768674f65a4891b8d6 163 Pfam PF07720 Tetratricopeptide repeat 40 71 3.0E-7 T 12-10-2018 IPR011716 Tetratricopeptide TPR-3 Vc3S01_2134 6e694259869439768674f65a4891b8d6 163 Pfam PF07720 Tetratricopeptide repeat 78 99 0.27 T 12-10-2018 IPR011716 Tetratricopeptide TPR-3 Vc3S01_2134 6e694259869439768674f65a4891b8d6 163 PIRSF PIRSF003165 1 163 9.5E-59 T 12-10-2018 IPR016379 Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup Vc3S01_2134 6e694259869439768674f65a4891b8d6 163 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 74 96 6.0E-34 T 12-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD Vc3S01_2134 6e694259869439768674f65a4891b8d6 163 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 106 128 6.0E-34 T 12-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD Vc3S01_2134 6e694259869439768674f65a4891b8d6 163 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 50 69 6.0E-34 T 12-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD Vc3S01_2134 6e694259869439768674f65a4891b8d6 163 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 25 48 6.0E-34 T 12-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD Vc3S01_2134 6e694259869439768674f65a4891b8d6 163 TIGRFAM TIGR02552 LcrH_SycD: type III secretion low calcium response chaperone LcrH/SycD 22 156 2.2E-43 T 12-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD Vc3S01_2134 6e694259869439768674f65a4891b8d6 163 Gene3D G3DSA:1.25.40.10 15 163 9.1E-53 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_2134 6e694259869439768674f65a4891b8d6 163 SUPERFAMILY SSF48452 28 150 5.69E-13 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_1690 3983b6a008d37057a7a7363870705e93 292 Gene3D G3DSA:2.30.30.60 140 191 1.2E-8 T 12-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily Vc3S01_1690 3983b6a008d37057a7a7363870705e93 292 Pfam PF00924 Mechanosensitive ion channel 86 283 1.0E-34 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 Vc3S01_1690 3983b6a008d37057a7a7363870705e93 292 SUPERFAMILY SSF82689 197 285 7.06E-7 T 12-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 Vc3S01_1690 3983b6a008d37057a7a7363870705e93 292 SUPERFAMILY SSF50182 125 187 1.63E-14 T 12-10-2018 IPR010920 LSM domain superfamily Vc3S01_1690 3983b6a008d37057a7a7363870705e93 292 Gene3D G3DSA:3.30.70.100 195 286 3.7E-6 T 12-10-2018 Vc3S01_A1244 5f3d6f3a518bdf6080ce2cc8b22b196d 156 SMART SM00953 15 143 5.0E-16 T 12-10-2018 IPR014914 RES domain Vc3S01_A1244 5f3d6f3a518bdf6080ce2cc8b22b196d 156 Pfam PF08808 RES domain 2 151 4.1E-25 T 12-10-2018 IPR014914 RES domain Vc3S01_2610 b99d2342a766e8647d87b69f73c097ca 546 SUPERFAMILY SSF50182 360 425 9.15E-13 T 12-10-2018 IPR010920 LSM domain superfamily Vc3S01_2610 b99d2342a766e8647d87b69f73c097ca 546 Gene3D G3DSA:2.30.30.60 376 424 8.5E-11 T 12-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily Vc3S01_2610 b99d2342a766e8647d87b69f73c097ca 546 SUPERFAMILY SSF82689 427 528 8.89E-14 T 12-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 Vc3S01_2610 b99d2342a766e8647d87b69f73c097ca 546 Pfam PF00924 Mechanosensitive ion channel 332 518 2.0E-39 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 Vc3S01_2610 b99d2342a766e8647d87b69f73c097ca 546 Gene3D G3DSA:3.30.70.100 426 523 2.8E-14 T 12-10-2018 Vc3S01_2610 b99d2342a766e8647d87b69f73c097ca 546 SUPERFAMILY SSF82861 278 357 1.44E-5 T 12-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 Vc3S01_A1883 b40ede957a2461e48544916e7929d5cb 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 2 61 1.3E-13 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A1883 b40ede957a2461e48544916e7929d5cb 296 Gene3D G3DSA:3.40.190.290 89 294 3.0E-42 T 12-10-2018 Vc3S01_A1883 b40ede957a2461e48544916e7929d5cb 296 SUPERFAMILY SSF46785 3 110 7.62E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A1883 b40ede957a2461e48544916e7929d5cb 296 Gene3D G3DSA:1.10.10.10 1 88 1.7E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A1883 b40ede957a2461e48544916e7929d5cb 296 Pfam PF03466 LysR substrate binding domain 86 293 2.3E-28 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_A1883 b40ede957a2461e48544916e7929d5cb 296 SUPERFAMILY SSF53850 88 293 2.48E-32 T 12-10-2018 Vc3S01_A1718 2d8bbf03a093af7baa7278414999552a 161 PIRSF PIRSF021320 5 160 1.8E-48 T 12-10-2018 IPR009326 Protein of unknown function DUF984 Vc3S01_A1718 2d8bbf03a093af7baa7278414999552a 161 SUPERFAMILY SSF88697 7 158 1.17E-52 T 12-10-2018 IPR015947 PUA-like superfamily Vc3S01_A1718 2d8bbf03a093af7baa7278414999552a 161 Gene3D G3DSA:3.10.400.10 2 157 4.1E-59 T 12-10-2018 Vc3S01_A1718 2d8bbf03a093af7baa7278414999552a 161 SMART SM01022 34 157 2.1E-36 T 12-10-2018 IPR007374 ASCH domain Vc3S01_A1718 2d8bbf03a093af7baa7278414999552a 161 Pfam PF04266 ASCH domain 45 157 3.9E-21 T 12-10-2018 IPR007374 ASCH domain Vc3S01_A0049 be68f9e7babf7a456871ac1505c40209 106 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 1 103 3.0E-41 T 12-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Vc3S01_A0049 be68f9e7babf7a456871ac1505c40209 106 Pfam PF00699 Urease beta subunit 4 99 7.7E-42 T 12-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Vc3S01_A0049 be68f9e7babf7a456871ac1505c40209 106 SUPERFAMILY SSF51278 1 105 5.23E-44 T 12-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Vc3S01_A0049 be68f9e7babf7a456871ac1505c40209 106 Hamap MF_01954 Urease subunit beta [ureB]. 1 101 29.591 T 12-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Vc3S01_A0049 be68f9e7babf7a456871ac1505c40209 106 Gene3D G3DSA:2.10.150.10 1 106 1.3E-44 T 12-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Vc3S01_p20040 097c6ccb9c91bf08cf710395bed0599a 490 SUPERFAMILY SSF52743 66 362 2.49E-51 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Vc3S01_p20040 097c6ccb9c91bf08cf710395bed0599a 490 Pfam PF00082 Subtilase family 79 329 2.8E-30 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 Vc3S01_p20040 097c6ccb9c91bf08cf710395bed0599a 490 Gene3D G3DSA:3.40.50.200 39 372 7.8E-57 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Vc3S01_p20040 097c6ccb9c91bf08cf710395bed0599a 490 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 294 304 - T 12-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site Vc3S01_A0556 7d1a07dcf575f15f48bdb381fa826891 99 Gene3D G3DSA:3.30.70.860 2 99 4.0E-39 T 12-10-2018 IPR035571 UPF0234-like, C-terminal Vc3S01_A0556 7d1a07dcf575f15f48bdb381fa826891 99 Pfam PF04175 Protein of unknown function (DUF406) 7 95 3.9E-28 T 12-10-2018 IPR005272 Conserved hypothetical protein CHP00743 Vc3S01_2022 87ea9444d78586aaa5034572ebd3d801 320 SUPERFAMILY SSF161098 70 298 2.29E-20 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_2022 87ea9444d78586aaa5034572ebd3d801 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 314 1.0E-43 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Vc3S01_2022 87ea9444d78586aaa5034572ebd3d801 320 Gene3D G3DSA:1.10.3720.10 69 308 8.0E-24 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_0452 269ea5677961549b564a7bc50bea4a53 440 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 197 411 6.1E-51 T 12-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 Vc3S01_0452 269ea5677961549b564a7bc50bea4a53 440 SUPERFAMILY SSF56327 173 436 3.99E-93 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 Vc3S01_0452 269ea5677961549b564a7bc50bea4a53 440 Gene3D G3DSA:3.90.110.10 171 439 2.5E-99 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 Vc3S01_0452 269ea5677961549b564a7bc50bea4a53 440 Gene3D G3DSA:3.40.50.720 2 170 1.7E-66 T 12-10-2018 Vc3S01_0452 269ea5677961549b564a7bc50bea4a53 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 99 112 7.3E-49 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Vc3S01_0452 269ea5677961549b564a7bc50bea4a53 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 167 178 7.3E-49 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Vc3S01_0452 269ea5677961549b564a7bc50bea4a53 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 78 94 7.3E-49 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Vc3S01_0452 269ea5677961549b564a7bc50bea4a53 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 113 133 7.3E-49 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Vc3S01_0452 269ea5677961549b564a7bc50bea4a53 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 142 159 7.3E-49 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Vc3S01_0452 269ea5677961549b564a7bc50bea4a53 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 193 205 7.3E-49 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Vc3S01_0452 269ea5677961549b564a7bc50bea4a53 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 7 22 7.3E-49 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Vc3S01_0452 269ea5677961549b564a7bc50bea4a53 440 Pfam PF02056 Family 4 glycosyl hydrolase 7 186 1.2E-63 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Vc3S01_0452 269ea5677961549b564a7bc50bea4a53 440 SUPERFAMILY SSF51735 6 170 3.61E-54 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_A2047 235ccb33209a845f1466f6c54d3b865d 236 Pfam PF00246 Zinc carboxypeptidase 18 156 2.6E-7 T 12-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 Vc3S01_A2047 235ccb33209a845f1466f6c54d3b865d 236 Gene3D G3DSA:3.40.630.10 1 236 1.9E-59 T 12-10-2018 Vc3S01_A2047 235ccb33209a845f1466f6c54d3b865d 236 SUPERFAMILY SSF53187 7 231 2.75E-28 T 12-10-2018 Vc3S01_A0433 36c822a27c31ac173295be091cc1f070 248 SUPERFAMILY SSF46785 136 223 6.45E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A0433 36c822a27c31ac173295be091cc1f070 248 SUPERFAMILY SSF52788 2 129 5.89E-35 T 12-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily Vc3S01_A0433 36c822a27c31ac173295be091cc1f070 248 Gene3D G3DSA:3.40.50.2300 1 131 6.0E-36 T 12-10-2018 Vc3S01_A0433 36c822a27c31ac173295be091cc1f070 248 Gene3D G3DSA:1.10.10.10 133 227 1.6E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A0433 36c822a27c31ac173295be091cc1f070 248 SMART SM00418 145 227 2.6E-19 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Vc3S01_A0433 36c822a27c31ac173295be091cc1f070 248 Pfam PF01022 Bacterial regulatory protein, arsR family 152 193 3.7E-11 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Vc3S01_A0433 36c822a27c31ac173295be091cc1f070 248 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 167 178 2.0E-14 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Vc3S01_A0433 36c822a27c31ac173295be091cc1f070 248 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 147 162 2.0E-14 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Vc3S01_A0433 36c822a27c31ac173295be091cc1f070 248 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 180 195 2.0E-14 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Vc3S01_A0433 36c822a27c31ac173295be091cc1f070 248 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 195 210 2.0E-14 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Vc3S01_A0433 36c822a27c31ac173295be091cc1f070 248 SMART SM00226 4 132 3.9E-23 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I Vc3S01_A0433 36c822a27c31ac173295be091cc1f070 248 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 6 127 6.5E-19 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I Vc3S01_0476 87831bb8dfa097e639ee1a9e1c622058 368 SUPERFAMILY SSF52540 4 334 1.63E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0476 87831bb8dfa097e639ee1a9e1c622058 368 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 342 1.3E-125 T 12-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 Vc3S01_0476 87831bb8dfa097e639ee1a9e1c622058 368 Gene3D G3DSA:3.40.50.300 99 356 6.4E-87 T 12-10-2018 Vc3S01_0476 87831bb8dfa097e639ee1a9e1c622058 368 Pfam PF00437 Type II/IV secretion system protein 116 249 6.4E-36 T 12-10-2018 IPR001482 Type II/IV secretion system protein Vc3S01_0476 87831bb8dfa097e639ee1a9e1c622058 368 Gene3D G3DSA:3.30.450.90 1 97 1.1E-22 T 12-10-2018 Vc3S01_0845 ea12725b754143d75fdbdfffa5c430bb 142 Pfam PF03646 FlaG protein 43 140 1.2E-25 T 12-10-2018 IPR005186 FlaG protein Vc3S01_0845 ea12725b754143d75fdbdfffa5c430bb 142 Gene3D G3DSA:3.30.160.170 40 139 7.0E-14 T 12-10-2018 IPR035924 FlaG-like superfamily Vc3S01_0845 ea12725b754143d75fdbdfffa5c430bb 142 SUPERFAMILY SSF160214 60 141 2.62E-23 T 12-10-2018 IPR035924 FlaG-like superfamily Vc3S01_2594 42def4b652ff5b283804f5b6ab34d4af 425 SUPERFAMILY SSF118215 6 407 1.96E-104 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 Vc3S01_2594 42def4b652ff5b283804f5b6ab34d4af 425 Gene3D G3DSA:1.10.3860.10 1 423 1.7E-113 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 Vc3S01_2594 42def4b652ff5b283804f5b6ab34d4af 425 PRINTS PR00173 Glutamate-aspartate symporter signature 52 72 4.2E-40 T 12-10-2018 Vc3S01_2594 42def4b652ff5b283804f5b6ab34d4af 425 PRINTS PR00173 Glutamate-aspartate symporter signature 149 171 4.2E-40 T 12-10-2018 Vc3S01_2594 42def4b652ff5b283804f5b6ab34d4af 425 PRINTS PR00173 Glutamate-aspartate symporter signature 360 380 4.2E-40 T 12-10-2018 Vc3S01_2594 42def4b652ff5b283804f5b6ab34d4af 425 PRINTS PR00173 Glutamate-aspartate symporter signature 82 107 4.2E-40 T 12-10-2018 Vc3S01_2594 42def4b652ff5b283804f5b6ab34d4af 425 PRINTS PR00173 Glutamate-aspartate symporter signature 333 352 4.2E-40 T 12-10-2018 Vc3S01_2594 42def4b652ff5b283804f5b6ab34d4af 425 PRINTS PR00173 Glutamate-aspartate symporter signature 4 24 4.2E-40 T 12-10-2018 Vc3S01_2594 42def4b652ff5b283804f5b6ab34d4af 425 PRINTS PR00173 Glutamate-aspartate symporter signature 298 324 4.2E-40 T 12-10-2018 Vc3S01_2594 42def4b652ff5b283804f5b6ab34d4af 425 PRINTS PR00173 Glutamate-aspartate symporter signature 231 250 4.2E-40 T 12-10-2018 Vc3S01_2594 42def4b652ff5b283804f5b6ab34d4af 425 PRINTS PR00173 Glutamate-aspartate symporter signature 196 215 4.2E-40 T 12-10-2018 Vc3S01_2594 42def4b652ff5b283804f5b6ab34d4af 425 Pfam PF00375 Sodium:dicarboxylate symporter family 7 405 1.1E-113 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Vc3S01_2823 c11511c8d0dd6ce5d1708a79f20c0bae 119 SMART SM00905 6 116 2.7E-48 T 12-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 Vc3S01_2823 c11511c8d0dd6ce5d1708a79f20c0bae 119 SUPERFAMILY SSF55620 3 117 4.11E-37 T 12-10-2018 Vc3S01_2823 c11511c8d0dd6ce5d1708a79f20c0bae 119 Gene3D G3DSA:3.30.1130.10 1 118 2.5E-45 T 12-10-2018 Vc3S01_2823 c11511c8d0dd6ce5d1708a79f20c0bae 119 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 4 116 3.2E-30 T 12-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 Vc3S01_2823 c11511c8d0dd6ce5d1708a79f20c0bae 119 TIGRFAM TIGR00526 folB_dom: FolB domain 4 117 2.6E-36 T 12-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 Vc3S01_2823 c11511c8d0dd6ce5d1708a79f20c0bae 119 Pfam PF02152 Dihydroneopterin aldolase 6 115 2.8E-32 T 12-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 Vc3S01_2025 e12d95fdcf0e8a454dcbc699f19cb074 260 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_2025 e12d95fdcf0e8a454dcbc699f19cb074 260 SUPERFAMILY SSF52540 3 252 5.09E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2025 e12d95fdcf0e8a454dcbc699f19cb074 260 Gene3D G3DSA:3.40.50.300 1 259 2.9E-69 T 12-10-2018 Vc3S01_2025 e12d95fdcf0e8a454dcbc699f19cb074 260 Pfam PF00005 ABC transporter 30 178 5.2E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_2025 e12d95fdcf0e8a454dcbc699f19cb074 260 SMART SM00382 38 227 4.3E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_2370 7d7a3ea8e8118a7123997602028c4dc6 270 SUPERFAMILY SSF52540 1 268 4.6E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2370 7d7a3ea8e8118a7123997602028c4dc6 270 Pfam PF13614 AAA domain 3 159 6.2E-19 T 12-10-2018 IPR025669 AAA domain Vc3S01_2370 7d7a3ea8e8118a7123997602028c4dc6 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 268 3.6E-109 T 12-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 Vc3S01_2370 7d7a3ea8e8118a7123997602028c4dc6 270 PIRSF PIRSF003092 1 270 2.9E-93 T 12-10-2018 IPR025501 ATP binding protein MinD Vc3S01_2370 7d7a3ea8e8118a7123997602028c4dc6 270 Gene3D G3DSA:3.40.50.300 1 260 1.7E-72 T 12-10-2018 Vc3S01_A1790 368e61005382ece3f088a6c6b731f16d 170 SUPERFAMILY SSF55729 2 147 2.02E-16 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_A1790 368e61005382ece3f088a6c6b731f16d 170 Gene3D G3DSA:3.40.630.30 1 141 2.6E-18 T 12-10-2018 Vc3S01_A1790 368e61005382ece3f088a6c6b731f16d 170 Pfam PF13302 Acetyltransferase (GNAT) domain 59 141 3.8E-8 T 12-10-2018 IPR000182 GNAT domain Vc3S01_2262 ff0438dc216898cb6fed4de6c1a38bbd 583 SMART SM00382 368 555 1.2E-18 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_2262 ff0438dc216898cb6fed4de6c1a38bbd 583 SUPERFAMILY SSF52540 331 581 6.97E-93 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2262 ff0438dc216898cb6fed4de6c1a38bbd 583 SUPERFAMILY SSF90123 14 327 3.4E-75 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Vc3S01_2262 ff0438dc216898cb6fed4de6c1a38bbd 583 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_2262 ff0438dc216898cb6fed4de6c1a38bbd 583 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 12 582 1.6E-238 T 12-10-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 Vc3S01_2262 ff0438dc216898cb6fed4de6c1a38bbd 583 Gene3D G3DSA:3.40.50.300 329 582 6.1E-96 T 12-10-2018 Vc3S01_2262 ff0438dc216898cb6fed4de6c1a38bbd 583 Pfam PF00664 ABC transporter transmembrane region 27 293 2.2E-56 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Vc3S01_2262 ff0438dc216898cb6fed4de6c1a38bbd 583 Pfam PF00005 ABC transporter 359 509 1.7E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_2262 ff0438dc216898cb6fed4de6c1a38bbd 583 Gene3D G3DSA:1.20.1560.10 2 328 2.9E-83 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Vc3S01_A2057 dc2ea7904c11ce88e64b25bdbb62e5c8 324 SUPERFAMILY SSF110849 75 150 1.88E-8 T 12-10-2018 IPR036086 ParB/Sulfiredoxin superfamily Vc3S01_A2057 dc2ea7904c11ce88e64b25bdbb62e5c8 324 Gene3D G3DSA:1.10.10.2830 153 272 6.4E-16 T 12-10-2018 Vc3S01_A2057 dc2ea7904c11ce88e64b25bdbb62e5c8 324 SMART SM00470 53 149 2.6E-7 T 12-10-2018 IPR003115 ParB/Sulfiredoxin Vc3S01_A2057 dc2ea7904c11ce88e64b25bdbb62e5c8 324 SUPERFAMILY SSF109709 152 238 6.15E-5 T 12-10-2018 Vc3S01_A2057 dc2ea7904c11ce88e64b25bdbb62e5c8 324 Pfam PF02195 ParB-like nuclease domain 78 145 1.1E-7 T 12-10-2018 IPR003115 ParB/Sulfiredoxin Vc3S01_A2057 dc2ea7904c11ce88e64b25bdbb62e5c8 324 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 68 228 7.8E-22 T 12-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 Vc3S01_A0946 0eccb46c57f2363498c9dc1a425fd8b1 301 Gene3D G3DSA:3.40.1010.10 49 166 5.4E-42 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Vc3S01_A0946 0eccb46c57f2363498c9dc1a425fd8b1 301 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 53 261 1.6E-41 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Vc3S01_A0946 0eccb46c57f2363498c9dc1a425fd8b1 301 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 51 285 1.1E-83 T 12-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Vc3S01_A0946 0eccb46c57f2363498c9dc1a425fd8b1 301 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 131 164 - T 12-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Vc3S01_A0946 0eccb46c57f2363498c9dc1a425fd8b1 301 Gene3D G3DSA:3.30.950.10 167 295 1.6E-34 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Vc3S01_A0946 0eccb46c57f2363498c9dc1a425fd8b1 301 SUPERFAMILY SSF53790 49 288 1.57E-66 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Vc3S01_2255 3f5c769100f6a2c8d13be17be2135003 166 Gene3D G3DSA:1.10.287.680 1 53 2.6E-32 T 12-10-2018 IPR023145 YfbU, helix-hairpin domain superfamily Vc3S01_2255 3f5c769100f6a2c8d13be17be2135003 166 Pfam PF03887 YfbU domain 1 166 7.8E-70 T 12-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU Vc3S01_2255 3f5c769100f6a2c8d13be17be2135003 166 SUPERFAMILY SSF116960 1 166 2.22E-64 T 12-10-2018 Vc3S01_2255 3f5c769100f6a2c8d13be17be2135003 166 Hamap MF_00762 UPF0304 protein YfbU [yfbU]. 1 166 38.084 T 12-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU Vc3S01_2255 3f5c769100f6a2c8d13be17be2135003 166 Gene3D G3DSA:1.10.3190.10 54 166 9.7E-37 T 12-10-2018 IPR023146 YfbU, alpha-helical bundle domain superfamily Vc3S01_2255 3f5c769100f6a2c8d13be17be2135003 166 PIRSF PIRSF006272 1 166 8.8E-80 T 12-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU Vc3S01_2255 3f5c769100f6a2c8d13be17be2135003 166 ProDom PD035118 UPF0304 YFBU PLASMID YPO2563/Y1624/YP2374 YBFU PM1500 OXYGEN ECA3037 VV12093 PROTEIN 1 166 2.0E-91 T 12-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU Vc3S01_2107 dfd2f9f58cee1eb0fbeaf136f428bf6c 415 SUPERFAMILY SSF53187 11 410 6.57E-72 T 12-10-2018 Vc3S01_2107 dfd2f9f58cee1eb0fbeaf136f428bf6c 415 PIRSF PIRSF001235 9 415 2.2E-117 T 12-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 Vc3S01_2107 dfd2f9f58cee1eb0fbeaf136f428bf6c 415 Pfam PF01546 Peptidase family M20/M25/M40 82 409 5.9E-23 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 Vc3S01_2107 dfd2f9f58cee1eb0fbeaf136f428bf6c 415 Gene3D G3DSA:3.30.70.360 218 331 1.9E-125 T 12-10-2018 Vc3S01_2107 dfd2f9f58cee1eb0fbeaf136f428bf6c 415 Gene3D G3DSA:3.40.630.10 28 406 1.9E-125 T 12-10-2018 Vc3S01_2107 dfd2f9f58cee1eb0fbeaf136f428bf6c 415 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 17 408 6.4E-116 T 12-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 Vc3S01_2107 dfd2f9f58cee1eb0fbeaf136f428bf6c 415 SUPERFAMILY SSF55031 218 331 5.23E-22 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Vc3S01_2696 b14b68c557ed24c1b021d99ca6bea049 327 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 9 291 2.9E-84 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Vc3S01_2696 b14b68c557ed24c1b021d99ca6bea049 327 SUPERFAMILY SSF51445 2 287 1.37E-85 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily Vc3S01_2696 b14b68c557ed24c1b021d99ca6bea049 327 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 3 327 45.311 T 12-10-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 Vc3S01_2696 b14b68c557ed24c1b021d99ca6bea049 327 Gene3D G3DSA:3.20.20.300 1 327 2.9E-125 T 12-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 Vc3S01_2696 b14b68c557ed24c1b021d99ca6bea049 327 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 229 246 - T 12-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 Vc3S01_0504 8f5add0ff2233f3aa460ac6e79a93408 322 Gene3D G3DSA:2.40.30.160 190 310 8.9E-34 T 12-10-2018 Vc3S01_0504 8f5add0ff2233f3aa460ac6e79a93408 322 Gene3D G3DSA:3.30.70.1630 26 187 2.8E-40 T 12-10-2018 Vc3S01_0504 8f5add0ff2233f3aa460ac6e79a93408 322 Gene3D G3DSA:3.30.70.1400 29 115 2.8E-40 T 12-10-2018 Vc3S01_0504 8f5add0ff2233f3aa460ac6e79a93408 322 SUPERFAMILY SSF101790 237 320 1.5E-18 T 12-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal Vc3S01_0504 8f5add0ff2233f3aa460ac6e79a93408 322 Pfam PF01571 Aminomethyltransferase folate-binding domain 30 144 2.6E-5 T 12-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain Vc3S01_0504 8f5add0ff2233f3aa460ac6e79a93408 322 SUPERFAMILY SSF103025 13 236 8.95E-56 T 12-10-2018 Vc3S01_0504 8f5add0ff2233f3aa460ac6e79a93408 322 Hamap MF_01175 tRNA-modifying protein YgfZ [ygfZ]. 1 316 43.062 T 12-10-2018 IPR023758 tRNA-modifying protein YgfZ GO:0005542|GO:0009451 Vc3S01_0504 8f5add0ff2233f3aa460ac6e79a93408 322 PIRSF PIRSF006487 162 294 0.34 T 12-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 Vc3S01_0504 8f5add0ff2233f3aa460ac6e79a93408 322 PIRSF PIRSF006487 20 156 5.9E-5 T 12-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 Vc3S01_0504 8f5add0ff2233f3aa460ac6e79a93408 322 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 181 245 1.0E-25 T 12-10-2018 IPR017703 YgfZ/GcvT conserved site Vc3S01_1196 6ac0be1e963e2cfef530dfb6853e2002 399 ProDom PD097636 LACTONE SYNTHASE HOMOSERINE VANM AUTOINDUCER SYNTHESIS LUXL 1 159 1.0E-85 T 12-10-2018 IPR020374 Homoserine lactone synthase LuxM/VanM, N-terminal GO:0016747 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 Vc3S01_1196 6ac0be1e963e2cfef530dfb6853e2002 399 Pfam PF17327 Acyl homoserine lactone synthase 18 390 7.1E-157 T 12-10-2018 IPR035304 Acyl homoserine lactone synthase GO:0009372|GO:0061579 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 Vc3S01_1196 6ac0be1e963e2cfef530dfb6853e2002 399 ProDom PD037532 SYNTHASE LACTONE HOMOSERINE AUTOINDUCER N-OCTANOYL VANM AINS LUXM SYNTHESIS 184 397 5.0E-123 T 12-10-2018 IPR020384 Homoserine lactone synthase LuxM/VanM, C-terminal GO:0016747 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 Vc3S01_0475 2bf7ba402e716afa2dfc6cf0e574e0d1 346 SMART SM00382 122 247 0.0068 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_0475 2bf7ba402e716afa2dfc6cf0e574e0d1 346 Pfam PF00437 Type II/IV secretion system protein 12 270 5.2E-47 T 12-10-2018 IPR001482 Type II/IV secretion system protein Vc3S01_0475 2bf7ba402e716afa2dfc6cf0e574e0d1 346 Gene3D G3DSA:3.30.450.90 1 100 1.3E-36 T 12-10-2018 Vc3S01_0475 2bf7ba402e716afa2dfc6cf0e574e0d1 346 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 12-10-2018 IPR001482 Type II/IV secretion system protein Vc3S01_0475 2bf7ba402e716afa2dfc6cf0e574e0d1 346 SUPERFAMILY SSF52540 5 336 1.18E-74 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0475 2bf7ba402e716afa2dfc6cf0e574e0d1 346 Gene3D G3DSA:3.40.50.300 101 345 1.6E-102 T 12-10-2018 Vc3S01_0475 2bf7ba402e716afa2dfc6cf0e574e0d1 346 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 334 2.2E-152 T 12-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 Vc3S01_A0860 d4d6149bfa67ebae67230118e7a3d24b 203 SUPERFAMILY SSF46626 16 193 3.3E-25 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Vc3S01_A0860 d4d6149bfa67ebae67230118e7a3d24b 203 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 7 182 1.8E-61 T 12-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO Vc3S01_A0860 d4d6149bfa67ebae67230118e7a3d24b 203 Gene3D G3DSA:1.10.760.10 40 200 2.7E-62 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Vc3S01_0205 b2b7074ce4e748cbac5a68958ac7a73b 208 Pfam PF01914 MarC family integral membrane protein 3 204 1.7E-43 T 12-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 Vc3S01_0205 b2b7074ce4e748cbac5a68958ac7a73b 208 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 2 202 7.6E-40 T 12-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 Vc3S01_1223 e7528f24721ba38adcf1aa649565a6ee 92 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 35 43 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 Vc3S01_1223 e7528f24721ba38adcf1aa649565a6ee 92 Gene3D G3DSA:3.10.20.30 2 88 1.5E-16 T 12-10-2018 IPR012675 Beta-grasp domain superfamily Vc3S01_1223 e7528f24721ba38adcf1aa649565a6ee 92 SUPERFAMILY SSF54292 8 81 1.44E-18 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Vc3S01_1223 e7528f24721ba38adcf1aa649565a6ee 92 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 8 74 2.7E-9 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Vc3S01_A1803 5fbd36bf5eaa2af866f1cf78681b4a1c 446 Pfam PF06123 Inner membrane protein CreD 9 429 2.0E-145 T 12-10-2018 IPR010364 Uncharacterised protein family, inner membrane CreD Vc3S01_A1803 5fbd36bf5eaa2af866f1cf78681b4a1c 446 PIRSF PIRSF004548 1 440 2.7E-138 T 12-10-2018 IPR010364 Uncharacterised protein family, inner membrane CreD Vc3S01_0646 155da1e018ea40485e120f186b6c5d25 357 Gene3D G3DSA:3.30.70.270 164 336 2.1E-46 T 12-10-2018 Vc3S01_0646 155da1e018ea40485e120f186b6c5d25 357 Pfam PF00990 Diguanylate cyclase, GGDEF domain 179 331 2.0E-36 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_0646 155da1e018ea40485e120f186b6c5d25 357 SUPERFAMILY SSF55073 183 334 1.1E-39 T 12-10-2018 IPR029787 Nucleotide cyclase Vc3S01_0646 155da1e018ea40485e120f186b6c5d25 357 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 175 335 2.3E-38 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_0646 155da1e018ea40485e120f186b6c5d25 357 SMART SM00267 167 335 9.5E-48 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A1820 f5512595cd65dae1b3efa4930004fb3f 222 Hamap MF_00789 UPF0319 protein YccT [yccT]. 5 221 29.187 T 12-10-2018 IPR018635 Uncharacterised protein family UPF0319 Vc3S01_A1820 f5512595cd65dae1b3efa4930004fb3f 222 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 24 216 2.7E-52 T 12-10-2018 IPR018635 Uncharacterised protein family UPF0319 Vc3S01_A0905 104031de3c3b0e192b23fabec890f9ae 247 PIRSF PIRSF039085 5 247 9.8E-92 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 Vc3S01_A0905 104031de3c3b0e192b23fabec890f9ae 247 SUPERFAMILY SSF52540 8 241 4.41E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A0905 104031de3c3b0e192b23fabec890f9ae 247 Pfam PF00005 ABC transporter 23 175 8.5E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_A0905 104031de3c3b0e192b23fabec890f9ae 247 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_A0905 104031de3c3b0e192b23fabec890f9ae 247 Gene3D G3DSA:3.40.50.300 4 246 8.6E-73 T 12-10-2018 Vc3S01_A0905 104031de3c3b0e192b23fabec890f9ae 247 SMART SM00382 32 223 1.8E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_1456 3da5c31b4c1e737312f27e40fa3e41fb 203 Gene3D G3DSA:1.10.3480.10 2 199 1.2E-45 T 12-10-2018 Vc3S01_1456 3da5c31b4c1e737312f27e40fa3e41fb 203 SUPERFAMILY SSF89155 5 198 5.89E-50 T 12-10-2018 IPR036411 TorD-like superfamily Vc3S01_1456 3da5c31b4c1e737312f27e40fa3e41fb 203 Pfam PF02613 Nitrate reductase delta subunit 40 157 8.9E-27 T 12-10-2018 IPR020945 DMSO/Nitrate reductase chaperone Vc3S01_1456 3da5c31b4c1e737312f27e40fa3e41fb 203 PIRSF PIRSF004690 3 198 3.4E-36 T 12-10-2018 IPR026269 Tat proofreading chaperone DmsD-type Vc3S01_A0781 81e72bf987dd05cd8008f824b2a130c2 264 SUPERFAMILY SSF56534 3 235 1.96E-95 T 12-10-2018 IPR036329 Aromatic amino acid monoxygenase, C-terminal domain superfamily Vc3S01_A0781 81e72bf987dd05cd8008f824b2a130c2 264 ProSitePatterns PS00367 Biopterin-dependent aromatic amino acid hydroxylases signature. 115 126 - T 12-10-2018 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site GO:0004497|GO:0005506|GO:0009072|GO:0055114 Vc3S01_A0781 81e72bf987dd05cd8008f824b2a130c2 264 Gene3D G3DSA:1.10.800.10 1 264 2.5E-94 T 12-10-2018 IPR036951 Aromatic amino acid hydroxylase superfamily GO:0004497|GO:0005506|GO:0009072|GO:0055114 Vc3S01_A0781 81e72bf987dd05cd8008f824b2a130c2 264 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 176 194 3.9E-8 T 12-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 Vc3S01_A0781 81e72bf987dd05cd8008f824b2a130c2 264 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 72 94 3.9E-8 T 12-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 Vc3S01_A0781 81e72bf987dd05cd8008f824b2a130c2 264 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 208 227 3.9E-8 T 12-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 Vc3S01_A0781 81e72bf987dd05cd8008f824b2a130c2 264 Pfam PF00351 Biopterin-dependent aromatic amino acid hydroxylase 10 229 6.8E-45 T 12-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 Vc3S01_A0781 81e72bf987dd05cd8008f824b2a130c2 264 TIGRFAM TIGR01267 Phe4hydrox_mono: phenylalanine-4-hydroxylase 13 238 8.1E-94 T 12-10-2018 IPR005960 Phenylalanine-4-hydroxylase, monomeric form GO:0004505|GO:0006559|GO:0055114 KEGG: 00360+1.14.16.1|KEGG: 00400+1.14.16.1|KEGG: 00790+1.14.16.1|MetaCyc: PWY-6134|MetaCyc: PWY-7158 Vc3S01_2558 597341e45b15f8d67fc15708858811c8 253 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 182 199 - T 12-10-2018 IPR000540 Flagellar motor protein MotA, conserved site Vc3S01_2558 597341e45b15f8d67fc15708858811c8 253 Pfam PF01618 MotA/TolQ/ExbB proton channel family 99 213 5.0E-22 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Vc3S01_2833 2005fd56fdbe63cf9d671f4d2063c42f 239 PIRSF PIRSF029033 1 239 2.2E-109 T 12-10-2018 IPR016907 Uncharacterised conserved protein UCP029033, periplasmic protein Vc3S01_2833 2005fd56fdbe63cf9d671f4d2063c42f 239 Pfam PF04402 Protein of unknown function (DUF541) 41 210 6.4E-17 T 12-10-2018 IPR007497 Protein of unknown function DUF541 Vc3S01_2833 2005fd56fdbe63cf9d671f4d2063c42f 239 Gene3D G3DSA:3.30.110.170 43 210 3.6E-11 T 12-10-2018 Vc3S01_2833 2005fd56fdbe63cf9d671f4d2063c42f 239 Gene3D G3DSA:3.30.70.2970 53 169 3.6E-11 T 12-10-2018 Vc3S01_2857 81516ede6701bbf783afd66d9a988192 515 Gene3D G3DSA:3.30.160.270 393 500 4.9E-7 T 12-10-2018 Vc3S01_2857 81516ede6701bbf783afd66d9a988192 515 Gene3D G3DSA:1.10.238.260 280 392 4.8E-32 T 12-10-2018 Vc3S01_2857 81516ede6701bbf783afd66d9a988192 515 SUPERFAMILY SSF51569 1 291 2.56E-101 T 12-10-2018 Vc3S01_2857 81516ede6701bbf783afd66d9a988192 515 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 12-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Vc3S01_2857 81516ede6701bbf783afd66d9a988192 515 SUPERFAMILY SSF110921 393 498 2.75E-21 T 12-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Vc3S01_2857 81516ede6701bbf783afd66d9a988192 515 Gene3D G3DSA:3.20.20.70 1 277 3.8E-107 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_2857 81516ede6701bbf783afd66d9a988192 515 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 498 2.3E-30 T 12-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Vc3S01_2857 81516ede6701bbf783afd66d9a988192 515 Pfam PF00682 HMGL-like 4 273 6.0E-101 T 12-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 Vc3S01_2857 81516ede6701bbf783afd66d9a988192 515 SMART SM00917 369 499 1.0E-27 T 12-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Vc3S01_2857 81516ede6701bbf783afd66d9a988192 515 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 496 1.5E-237 T 12-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Vc3S01_2857 81516ede6701bbf783afd66d9a988192 515 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 12-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Vc3S01_2857 81516ede6701bbf783afd66d9a988192 515 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 508 42.259 T 12-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Vc3S01_A0359 0d93908c378c51a38a3ba93ea03a3e9d 265 SUPERFAMILY SSF141868 30 257 1.24E-9 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_A0359 0d93908c378c51a38a3ba93ea03a3e9d 265 Pfam PF00563 EAL domain 31 250 4.0E-8 T 12-10-2018 IPR001633 EAL domain Vc3S01_A0359 0d93908c378c51a38a3ba93ea03a3e9d 265 Gene3D G3DSA:3.20.20.450 26 261 1.3E-9 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_A1989 d02600c20c48e807443728460af45106 199 Pfam PF01810 LysE type translocator 14 195 2.8E-18 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Vc3S01_A0418 86246d68db289ac46f836412e4caff09 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 5.5E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A0418 86246d68db289ac46f836412e4caff09 299 Gene3D G3DSA:1.10.10.10 1 85 1.1E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A0418 86246d68db289ac46f836412e4caff09 299 SUPERFAMILY SSF46785 1 87 2.9E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A0418 86246d68db289ac46f836412e4caff09 299 Pfam PF03466 LysR substrate binding domain 88 291 7.9E-42 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_A0418 86246d68db289ac46f836412e4caff09 299 SUPERFAMILY SSF53850 88 292 1.72E-42 T 12-10-2018 Vc3S01_A0418 86246d68db289ac46f836412e4caff09 299 Gene3D G3DSA:3.40.190.290 90 292 5.1E-62 T 12-10-2018 Vc3S01_0249 0aab6aa10d07789d1cc5885e7bdedb55 576 Gene3D G3DSA:3.40.630.40 158 402 3.0E-69 T 12-10-2018 Vc3S01_0249 0aab6aa10d07789d1cc5885e7bdedb55 576 Gene3D G3DSA:2.60.40.3500 23 137 1.5E-27 T 12-10-2018 Vc3S01_0249 0aab6aa10d07789d1cc5885e7bdedb55 576 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 172 392 1.2E-49 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 Vc3S01_0249 0aab6aa10d07789d1cc5885e7bdedb55 576 SUPERFAMILY SSF54106 531 574 4.71E-10 T 12-10-2018 Vc3S01_0249 0aab6aa10d07789d1cc5885e7bdedb55 576 SMART SM00257 478 521 7.1E-14 T 12-10-2018 IPR018392 LysM domain Vc3S01_0249 0aab6aa10d07789d1cc5885e7bdedb55 576 SMART SM00257 413 456 7.0E-17 T 12-10-2018 IPR018392 LysM domain Vc3S01_0249 0aab6aa10d07789d1cc5885e7bdedb55 576 SMART SM00257 531 574 1.4E-12 T 12-10-2018 IPR018392 LysM domain Vc3S01_0249 0aab6aa10d07789d1cc5885e7bdedb55 576 Gene3D G3DSA:3.10.350.10 465 526 1.4E-14 T 12-10-2018 IPR036779 LysM domain superfamily Vc3S01_0249 0aab6aa10d07789d1cc5885e7bdedb55 576 Gene3D G3DSA:3.10.350.10 527 576 1.1E-15 T 12-10-2018 IPR036779 LysM domain superfamily Vc3S01_0249 0aab6aa10d07789d1cc5885e7bdedb55 576 Gene3D G3DSA:3.10.350.10 404 464 3.0E-16 T 12-10-2018 IPR036779 LysM domain superfamily Vc3S01_0249 0aab6aa10d07789d1cc5885e7bdedb55 576 Pfam PF01476 LysM domain 414 456 1.1E-15 T 12-10-2018 IPR018392 LysM domain Vc3S01_0249 0aab6aa10d07789d1cc5885e7bdedb55 576 Pfam PF01476 LysM domain 479 521 4.0E-11 T 12-10-2018 IPR018392 LysM domain Vc3S01_0249 0aab6aa10d07789d1cc5885e7bdedb55 576 Pfam PF01476 LysM domain 532 574 6.7E-13 T 12-10-2018 IPR018392 LysM domain Vc3S01_0249 0aab6aa10d07789d1cc5885e7bdedb55 576 SUPERFAMILY SSF54106 413 456 8.63E-11 T 12-10-2018 Vc3S01_0249 0aab6aa10d07789d1cc5885e7bdedb55 576 SUPERFAMILY SSF53187 170 395 3.45E-53 T 12-10-2018 Vc3S01_0249 0aab6aa10d07789d1cc5885e7bdedb55 576 SMART SM00646 233 392 1.9E-63 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 Vc3S01_0249 0aab6aa10d07789d1cc5885e7bdedb55 576 SUPERFAMILY SSF54106 477 521 1.7E-9 T 12-10-2018 Vc3S01_0249 0aab6aa10d07789d1cc5885e7bdedb55 576 Pfam PF11741 AMIN domain 34 135 5.3E-19 T 12-10-2018 IPR021731 AMIN domain Vc3S01_A1286 927693563dbb1d4c28c31ac551443997 149 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 15 132 2.9E-30 T 12-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN Vc3S01_A1286 927693563dbb1d4c28c31ac551443997 149 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 11 135 3.4E-38 T 12-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN Vc3S01_A1286 927693563dbb1d4c28c31ac551443997 149 Gene3D G3DSA:2.60.40.4150 12 147 1.6E-31 T 12-10-2018 IPR038706 Type VI secretion protein SciN-like superfamily Vc3S01_1171 e3815cd64c0d2a656c28e30f5c16a14c 346 SUPERFAMILY SSF53448 22 197 1.88E-36 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Vc3S01_1171 e3815cd64c0d2a656c28e30f5c16a14c 346 Gene3D G3DSA:3.90.550.10 6 206 8.6E-35 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Vc3S01_1171 e3815cd64c0d2a656c28e30f5c16a14c 346 Pfam PF00535 Glycosyl transferase family 2 25 187 1.8E-33 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Vc3S01_1874 cca81776629e4742cc5a575f96eebbc7 801 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 800 4.2E-274 T 12-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 Vc3S01_1874 cca81776629e4742cc5a575f96eebbc7 801 Gene3D G3DSA:3.30.56.10 401 475 8.8E-26 T 12-10-2018 Vc3S01_1874 cca81776629e4742cc5a575f96eebbc7 801 SUPERFAMILY SSF55681 467 695 4.92E-48 T 12-10-2018 Vc3S01_1874 cca81776629e4742cc5a575f96eebbc7 801 Pfam PF03147 Ferredoxin-fold anticodon binding domain 707 800 1.9E-28 T 12-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 Vc3S01_1874 cca81776629e4742cc5a575f96eebbc7 801 Gene3D G3DSA:2.40.50.140 39 154 1.1E-69 T 12-10-2018 Vc3S01_1874 cca81776629e4742cc5a575f96eebbc7 801 Gene3D G3DSA:3.30.56.10 7 179 1.1E-69 T 12-10-2018 Vc3S01_1874 cca81776629e4742cc5a575f96eebbc7 801 Pfam PF03483 B3/4 domain 212 385 8.0E-71 T 12-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 Vc3S01_1874 cca81776629e4742cc5a575f96eebbc7 801 Gene3D G3DSA:3.30.930.10 485 697 1.4E-57 T 12-10-2018 Vc3S01_1874 cca81776629e4742cc5a575f96eebbc7 801 Pfam PF03484 tRNA synthetase B5 domain 406 471 7.9E-19 T 12-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 Vc3S01_1874 cca81776629e4742cc5a575f96eebbc7 801 Gene3D G3DSA:3.50.40.10 197 395 6.2E-83 T 12-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 Vc3S01_1874 cca81776629e4742cc5a575f96eebbc7 801 SUPERFAMILY SSF46955 404 475 3.85E-20 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily Vc3S01_1874 cca81776629e4742cc5a575f96eebbc7 801 SUPERFAMILY SSF54991 703 800 4.32E-30 T 12-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 Vc3S01_1874 cca81776629e4742cc5a575f96eebbc7 801 Pfam PF01588 Putative tRNA binding domain 45 145 2.2E-25 T 12-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 Vc3S01_1874 cca81776629e4742cc5a575f96eebbc7 801 SMART SM00896 707 800 5.5E-45 T 12-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 Vc3S01_1874 cca81776629e4742cc5a575f96eebbc7 801 SUPERFAMILY SSF56037 196 394 4.97E-77 T 12-10-2018 Vc3S01_1874 cca81776629e4742cc5a575f96eebbc7 801 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 794 46.371 T 12-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 Vc3S01_1874 cca81776629e4742cc5a575f96eebbc7 801 SUPERFAMILY SSF50249 38 193 5.14E-47 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Vc3S01_1874 cca81776629e4742cc5a575f96eebbc7 801 SMART SM00873 212 385 1.9E-99 T 12-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 Vc3S01_1874 cca81776629e4742cc5a575f96eebbc7 801 SMART SM00874 403 471 1.0E-29 T 12-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 Vc3S01_1874 cca81776629e4742cc5a575f96eebbc7 801 Gene3D G3DSA:3.30.70.380 708 801 1.6E-29 T 12-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 Vc3S01_A1760 123d79e6f78bda5323aee5e1360c3772 806 Pfam PF07971 Glycosyl hydrolase family 92 285 793 3.9E-139 T 12-10-2018 IPR012939 Glycosyl hydrolase family 92 Vc3S01_A1760 123d79e6f78bda5323aee5e1360c3772 806 Gene3D G3DSA:2.70.98.10 44 396 6.6E-207 T 12-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 Vc3S01_A1760 123d79e6f78bda5323aee5e1360c3772 806 Gene3D G3DSA:1.20.1050.60 397 499 6.6E-207 T 12-10-2018 Vc3S01_A1760 123d79e6f78bda5323aee5e1360c3772 806 Gene3D G3DSA:3.30.2080.10 342 796 6.6E-207 T 12-10-2018 Vc3S01_A1760 123d79e6f78bda5323aee5e1360c3772 806 Gene3D G3DSA:1.20.1610.10 500 669 6.6E-207 T 12-10-2018 Vc3S01_A1760 123d79e6f78bda5323aee5e1360c3772 806 SUPERFAMILY SSF48208 307 776 3.74E-21 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Vc3S01_A1760 123d79e6f78bda5323aee5e1360c3772 806 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 41 794 2.0E-150 T 12-10-2018 IPR005887 Alpha-1,2-mannosidase, putative Vc3S01_A0805 2cc83456dd50ccb871331c0b0ad78b4c 411 SUPERFAMILY SSF56672 161 274 2.52E-5 T 12-10-2018 Vc3S01_A0805 2cc83456dd50ccb871331c0b0ad78b4c 411 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 92 254 7.0E-13 T 12-10-2018 IPR000477 Reverse transcriptase domain Vc3S01_A0909 1715c787290ff05614f92268be0880a6 190 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 61 89 - T 12-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 Vc3S01_A0909 1715c787290ff05614f92268be0880a6 190 SUPERFAMILY SSF49482 18 189 1.83E-47 T 12-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 Vc3S01_A0909 1715c787290ff05614f92268be0880a6 190 Gene3D G3DSA:2.60.130.10 4 190 3.2E-45 T 12-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 Vc3S01_A0909 1715c787290ff05614f92268be0880a6 190 Pfam PF00775 Dioxygenase 32 156 7.2E-22 T 12-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 Vc3S01_A0599 7df52f4d5b74420020454549c09cd5dc 237 SUPERFAMILY SSF52172 7 129 4.84E-38 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_A0599 7df52f4d5b74420020454549c09cd5dc 237 SMART SM00862 154 230 6.2E-18 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Vc3S01_A0599 7df52f4d5b74420020454549c09cd5dc 237 SMART SM00448 8 118 2.2E-38 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A0599 7df52f4d5b74420020454549c09cd5dc 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 230 6.1E-20 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Vc3S01_A0599 7df52f4d5b74420020454549c09cd5dc 237 Pfam PF00072 Response regulator receiver domain 11 119 5.4E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A0599 7df52f4d5b74420020454549c09cd5dc 237 Gene3D G3DSA:3.40.50.2300 2 122 3.8E-34 T 12-10-2018 Vc3S01_A0599 7df52f4d5b74420020454549c09cd5dc 237 SUPERFAMILY SSF46894 132 232 7.94E-24 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Vc3S01_A0599 7df52f4d5b74420020454549c09cd5dc 237 Gene3D G3DSA:1.10.10.10 123 237 1.1E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A0177 6b942decc40e6c5377c37f8f69a33a4a 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 118 138 3.0E-14 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Vc3S01_A0177 6b942decc40e6c5377c37f8f69a33a4a 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 52 68 3.0E-14 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Vc3S01_A0177 6b942decc40e6c5377c37f8f69a33a4a 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 104 3.0E-14 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Vc3S01_A0177 6b942decc40e6c5377c37f8f69a33a4a 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 84 3.0E-14 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Vc3S01_A0177 6b942decc40e6c5377c37f8f69a33a4a 142 Pfam PF01047 MarR family 35 92 6.9E-17 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Vc3S01_A0177 6b942decc40e6c5377c37f8f69a33a4a 142 SMART SM00347 28 128 7.7E-29 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Vc3S01_A0177 6b942decc40e6c5377c37f8f69a33a4a 142 SUPERFAMILY SSF46785 3 140 3.64E-36 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A0177 6b942decc40e6c5377c37f8f69a33a4a 142 Gene3D G3DSA:1.10.10.10 1 142 8.1E-39 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_0823 d8333c2ac7cb9b0f2417d500d24756c2 78 SUPERFAMILY SSF64307 2 68 8.24E-9 T 12-10-2018 IPR036868 TusA-like domain superfamily Vc3S01_0823 d8333c2ac7cb9b0f2417d500d24756c2 78 Pfam PF01206 Sulfurtransferase TusA 3 68 7.8E-10 T 12-10-2018 IPR001455 TusA-like domain Vc3S01_0823 d8333c2ac7cb9b0f2417d500d24756c2 78 Gene3D G3DSA:3.30.110.40 1 73 3.9E-6 T 12-10-2018 IPR036868 TusA-like domain superfamily Vc3S01_A0588 1f18c03492165a4e40ed66741236c7f3 143 PIRSF PIRSF028777 1 138 1.8E-52 T 12-10-2018 IPR031308 Uncharacterised conserved protein UCP028777 Vc3S01_A0588 1f18c03492165a4e40ed66741236c7f3 143 Pfam PF03733 Inner membrane component domain 4 54 7.7E-15 T 12-10-2018 IPR005185 Inner membrane component domain Vc3S01_A0588 1f18c03492165a4e40ed66741236c7f3 143 Pfam PF03733 Inner membrane component domain 76 126 1.6E-18 T 12-10-2018 IPR005185 Inner membrane component domain Vc3S01_0568 e3930a70d919d1d285a24124684882c7 887 PIRSF PIRSF000156 1 887 0.0 T 12-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 Vc3S01_0568 e3930a70d919d1d285a24124684882c7 887 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 4 886 0.0 T 12-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 Vc3S01_0568 e3930a70d919d1d285a24124684882c7 887 Gene3D G3DSA:3.40.50.920 707 887 8.1E-70 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Vc3S01_0568 e3930a70d919d1d285a24124684882c7 887 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 103 298 1.5E-9 T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Vc3S01_0568 e3930a70d919d1d285a24124684882c7 887 SUPERFAMILY SSF52518 474 701 1.88E-97 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold Vc3S01_0568 e3930a70d919d1d285a24124684882c7 887 SUPERFAMILY SSF52922 702 886 2.26E-58 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Vc3S01_0568 e3930a70d919d1d285a24124684882c7 887 SUPERFAMILY SSF52518 56 469 3.17E-139 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold Vc3S01_0568 e3930a70d919d1d285a24124684882c7 887 Gene3D G3DSA:3.40.50.970 472 706 2.7E-111 T 12-10-2018 Vc3S01_0568 e3930a70d919d1d285a24124684882c7 887 Gene3D G3DSA:3.40.50.970 55 471 3.3E-131 T 12-10-2018 Vc3S01_2066 7050f01c1dcfbec5cecb988075e28fec 418 Pfam PF02353 Mycolic acid cyclopropane synthetase 142 411 1.7E-80 T 12-10-2018 Vc3S01_2066 7050f01c1dcfbec5cecb988075e28fec 418 SUPERFAMILY SSF53335 21 371 1.05E-90 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Vc3S01_2066 7050f01c1dcfbec5cecb988075e28fec 418 PIRSF PIRSF003085 20 418 8.6E-120 T 12-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 Vc3S01_2066 7050f01c1dcfbec5cecb988075e28fec 418 Gene3D G3DSA:3.40.50.150 149 418 3.0E-99 T 12-10-2018 Vc3S01_1871 1e0af6898ffac5f877adbe76de452dfb 498 SMART SM00382 316 493 9.5E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_1871 1e0af6898ffac5f877adbe76de452dfb 498 Gene3D G3DSA:3.40.50.300 284 496 5.2E-51 T 12-10-2018 Vc3S01_1871 1e0af6898ffac5f877adbe76de452dfb 498 SUPERFAMILY SSF90123 4 275 2.88E-29 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Vc3S01_1871 1e0af6898ffac5f877adbe76de452dfb 498 Pfam PF00005 ABC transporter 308 445 2.4E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_1871 1e0af6898ffac5f877adbe76de452dfb 498 ProSitePatterns PS00211 ABC transporters family signature. 417 431 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_1871 1e0af6898ffac5f877adbe76de452dfb 498 Pfam PF00664 ABC transporter transmembrane region 18 224 1.4E-10 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Vc3S01_1871 1e0af6898ffac5f877adbe76de452dfb 498 SUPERFAMILY SSF52540 286 493 5.86E-50 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_1871 1e0af6898ffac5f877adbe76de452dfb 498 Gene3D G3DSA:1.20.1560.10 4 278 3.0E-23 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Vc3S01_A1927 435464e5599118c37f7205a9383b28f0 375 Pfam PF16966 Porin-like glycoporin RafY 46 375 2.6E-99 T 12-10-2018 IPR016963 Glycoporin RafY Vc3S01_A1927 435464e5599118c37f7205a9383b28f0 375 SUPERFAMILY SSF56935 26 375 2.26E-16 T 12-10-2018 Vc3S01_1909 5bce81573766b12bfbed80cde4b31fc4 222 PRINTS PR01021 OMPA domain signature 163 179 9.7E-13 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Vc3S01_1909 5bce81573766b12bfbed80cde4b31fc4 222 PRINTS PR01021 OMPA domain signature 118 140 9.7E-13 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Vc3S01_1909 5bce81573766b12bfbed80cde4b31fc4 222 PRINTS PR01021 OMPA domain signature 148 163 9.7E-13 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Vc3S01_1909 5bce81573766b12bfbed80cde4b31fc4 222 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 181 200 1.0E-7 T 12-10-2018 Vc3S01_1909 5bce81573766b12bfbed80cde4b31fc4 222 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 201 221 1.0E-7 T 12-10-2018 Vc3S01_1909 5bce81573766b12bfbed80cde4b31fc4 222 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 163 180 1.0E-7 T 12-10-2018 Vc3S01_1909 5bce81573766b12bfbed80cde4b31fc4 222 Gene3D G3DSA:3.30.1330.60 80 222 6.1E-45 T 12-10-2018 IPR036737 OmpA-like domain superfamily Vc3S01_1909 5bce81573766b12bfbed80cde4b31fc4 222 Pfam PF13488 Glycine zipper 41 86 6.0E-12 T 12-10-2018 IPR039567 Glycine zipper domain Vc3S01_1909 5bce81573766b12bfbed80cde4b31fc4 222 Pfam PF00691 OmpA family 118 212 1.3E-23 T 12-10-2018 IPR006665 OmpA-like domain Vc3S01_1909 5bce81573766b12bfbed80cde4b31fc4 222 SUPERFAMILY SSF103088 106 221 4.97E-38 T 12-10-2018 IPR036737 OmpA-like domain superfamily Vc3S01_A1961 19feadbcb9fa6ba0cffbbf1aa9bd9a22 334 SUPERFAMILY SSF53448 1 252 8.44E-34 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Vc3S01_A1961 19feadbcb9fa6ba0cffbbf1aa9bd9a22 334 Gene3D G3DSA:3.90.550.10 1 235 2.1E-43 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Vc3S01_A1961 19feadbcb9fa6ba0cffbbf1aa9bd9a22 334 Pfam PF00535 Glycosyl transferase family 2 6 167 3.0E-22 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Vc3S01_p30042 4ed8c3e2232e1c7a270086b97550333f 184 Gene3D G3DSA:3.40.960.10 59 174 2.9E-5 T 12-10-2018 Vc3S01_p30042 4ed8c3e2232e1c7a270086b97550333f 184 Pfam PF10881 Protein of unknown function (DUF2726) 58 170 4.2E-19 T 12-10-2018 IPR024402 Domain of unknown function DUF2726 Vc3S01_1672 b2b13adc6cac8e8f3bf2d8351d945713 345 PIRSF PIRSF019574 1 345 1.9E-125 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Vc3S01_1672 b2b13adc6cac8e8f3bf2d8351d945713 345 Gene3D G3DSA:3.40.190.10 29 312 1.2E-121 T 12-10-2018 Vc3S01_1672 b2b13adc6cac8e8f3bf2d8351d945713 345 Pfam PF13416 Bacterial extracellular solute-binding protein 40 311 2.0E-43 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein Vc3S01_1672 b2b13adc6cac8e8f3bf2d8351d945713 345 SUPERFAMILY SSF53850 24 342 1.48E-93 T 12-10-2018 Vc3S01_1672 b2b13adc6cac8e8f3bf2d8351d945713 345 Gene3D G3DSA:3.40.190.10 129 318 1.2E-121 T 12-10-2018 Vc3S01_1672 b2b13adc6cac8e8f3bf2d8351d945713 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 30 46 5.9E-85 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Vc3S01_1672 b2b13adc6cac8e8f3bf2d8351d945713 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 290 316 5.9E-85 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Vc3S01_1672 b2b13adc6cac8e8f3bf2d8351d945713 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 89 102 5.9E-85 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Vc3S01_1672 b2b13adc6cac8e8f3bf2d8351d945713 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 46 67 5.9E-85 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Vc3S01_1672 b2b13adc6cac8e8f3bf2d8351d945713 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 245 264 5.9E-85 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Vc3S01_1672 b2b13adc6cac8e8f3bf2d8351d945713 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 146 160 5.9E-85 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Vc3S01_1672 b2b13adc6cac8e8f3bf2d8351d945713 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 120 136 5.9E-85 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Vc3S01_1672 b2b13adc6cac8e8f3bf2d8351d945713 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 164 183 5.9E-85 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Vc3S01_1672 b2b13adc6cac8e8f3bf2d8351d945713 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 73 87 5.9E-85 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Vc3S01_1672 b2b13adc6cac8e8f3bf2d8351d945713 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 201 220 5.9E-85 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Vc3S01_2713 4bce819e6d1900b017be34695f83a846 296 SUPERFAMILY SSF46785 2 85 1.27E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_2713 4bce819e6d1900b017be34695f83a846 296 Gene3D G3DSA:1.10.10.10 4 92 8.6E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_2713 4bce819e6d1900b017be34695f83a846 296 Pfam PF03466 LysR substrate binding domain 96 288 6.5E-13 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_2713 4bce819e6d1900b017be34695f83a846 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 5.6E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_2713 4bce819e6d1900b017be34695f83a846 296 Gene3D G3DSA:3.40.190.290 95 293 3.9E-9 T 12-10-2018 Vc3S01_2713 4bce819e6d1900b017be34695f83a846 296 SUPERFAMILY SSF53850 90 288 1.1E-25 T 12-10-2018 Vc3S01_p40121 843de9659146640b59ceba6ec7a2d49e 368 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 346 367 0.0011 T 12-10-2018 IPR020008 GlyGly-CTERM domain Vc3S01_p40121 843de9659146640b59ceba6ec7a2d49e 368 SUPERFAMILY SSF50494 33 196 2.02E-17 T 12-10-2018 IPR009003 Peptidase S1, PA clan Vc3S01_p40121 843de9659146640b59ceba6ec7a2d49e 368 Gene3D G3DSA:2.40.10.10 103 204 2.2E-6 T 12-10-2018 Vc3S01_p40121 843de9659146640b59ceba6ec7a2d49e 368 Pfam PF00089 Trypsin 48 190 1.9E-12 T 12-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 Vc3S01_p40121 843de9659146640b59ceba6ec7a2d49e 368 Gene3D G3DSA:2.40.10.10 38 75 2.2E-5 T 12-10-2018 Vc3S01_1337 79728d5fece53cf8acd4532978b009ab 159 Gene3D G3DSA:3.90.1720.70 1 158 4.8E-52 T 12-10-2018 Vc3S01_1337 79728d5fece53cf8acd4532978b009ab 159 Pfam PF14113 Type VI secretion system (T6SS), amidase effector protein 4 47 155 1.2E-22 T 12-10-2018 IPR025562 Type VI secretion system (T6SS), amidase effector protein 4 Vc3S01_0789 35729f60ddf7ac57eb15deba0710eed0 169 Gene3D G3DSA:3.30.910.20 25 169 2.1E-34 T 12-10-2018 IPR024930 Skp domain superfamily Vc3S01_0789 35729f60ddf7ac57eb15deba0710eed0 169 SUPERFAMILY SSF111384 26 169 6.93E-31 T 12-10-2018 Vc3S01_0789 35729f60ddf7ac57eb15deba0710eed0 169 Pfam PF03938 Outer membrane protein (OmpH-like) 13 168 6.1E-27 T 12-10-2018 IPR005632 Chaperone protein Skp GO:0051082 Vc3S01_0789 35729f60ddf7ac57eb15deba0710eed0 169 SMART SM00935 15 169 3.7E-43 T 12-10-2018 IPR005632 Chaperone protein Skp GO:0051082 Vc3S01_0789 35729f60ddf7ac57eb15deba0710eed0 169 PIRSF PIRSF002094 1 169 4.2E-40 T 12-10-2018 IPR005632 Chaperone protein Skp GO:0051082 Vc3S01_1104 62812bc462251a5bb26a5975097d7227 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 84 110 1.1E-34 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Vc3S01_1104 62812bc462251a5bb26a5975097d7227 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 257 277 1.1E-34 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Vc3S01_1104 62812bc462251a5bb26a5975097d7227 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 40 59 1.1E-34 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Vc3S01_1104 62812bc462251a5bb26a5975097d7227 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 311 330 1.1E-34 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Vc3S01_1104 62812bc462251a5bb26a5975097d7227 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 429 449 1.1E-34 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Vc3S01_1104 62812bc462251a5bb26a5975097d7227 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 11 32 1.1E-34 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Vc3S01_1104 62812bc462251a5bb26a5975097d7227 486 SUPERFAMILY SSF161070 3 474 9.55E-148 T 12-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 Vc3S01_1104 62812bc462251a5bb26a5975097d7227 486 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 27 41 - T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Vc3S01_1104 62812bc462251a5bb26a5975097d7227 486 Pfam PF00209 Sodium:neurotransmitter symporter family 121 469 3.5E-77 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Vc3S01_1104 62812bc462251a5bb26a5975097d7227 486 Pfam PF00209 Sodium:neurotransmitter symporter family 3 120 1.3E-39 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Vc3S01_0481 cff532f0ed7df48fc212f04db8d7a51c 231 SUPERFAMILY SSF54060 20 228 3.65E-94 T 12-10-2018 Vc3S01_0481 cff532f0ed7df48fc212f04db8d7a51c 231 Pfam PF04231 Endonuclease I 33 227 1.5E-46 T 12-10-2018 IPR007346 Endonuclease I GO:0004518 Vc3S01_1335 9edbf47d3d95ad177b1b089e76815e13 353 SUPERFAMILY SSF81301 4 200 1.24E-38 T 12-10-2018 Vc3S01_1335 9edbf47d3d95ad177b1b089e76815e13 353 Gene3D G3DSA:1.10.287.860 154 205 4.6E-8 T 12-10-2018 Vc3S01_1335 9edbf47d3d95ad177b1b089e76815e13 353 Gene3D G3DSA:3.30.460.10 4 151 1.9E-30 T 12-10-2018 Vc3S01_1335 9edbf47d3d95ad177b1b089e76815e13 353 SMART SM00954 43 171 3.5E-20 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 Vc3S01_1335 9edbf47d3d95ad177b1b089e76815e13 353 Pfam PF04607 Region found in RelA / SpoT proteins 43 169 8.2E-25 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 Vc3S01_A1068 0b0bd88285aefd2b1b66e71f931387a9 578 Gene3D G3DSA:3.90.780.10 368 573 2.1E-32 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Vc3S01_A1068 0b0bd88285aefd2b1b66e71f931387a9 578 SUPERFAMILY SSF55816 367 562 4.19E-37 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Vc3S01_A1068 0b0bd88285aefd2b1b66e71f931387a9 578 Pfam PF00149 Calcineurin-like phosphoesterase 11 250 2.5E-9 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Vc3S01_A1068 0b0bd88285aefd2b1b66e71f931387a9 578 SUPERFAMILY SSF56300 9 324 1.88E-73 T 12-10-2018 Vc3S01_A1068 0b0bd88285aefd2b1b66e71f931387a9 578 Pfam PF02872 5'-nucleotidase, C-terminal domain 371 537 7.5E-21 T 12-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Vc3S01_A1068 0b0bd88285aefd2b1b66e71f931387a9 578 Gene3D G3DSA:3.60.21.10 1 367 2.4E-88 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like Vc3S01_A1068 0b0bd88285aefd2b1b66e71f931387a9 578 PRINTS PR01607 Apyrase family signature 233 256 3.8E-12 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Vc3S01_A1068 0b0bd88285aefd2b1b66e71f931387a9 578 PRINTS PR01607 Apyrase family signature 273 293 3.8E-12 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Vc3S01_A1068 0b0bd88285aefd2b1b66e71f931387a9 578 PRINTS PR01607 Apyrase family signature 214 231 3.8E-12 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Vc3S01_A1068 0b0bd88285aefd2b1b66e71f931387a9 578 PRINTS PR01607 Apyrase family signature 8 26 3.8E-12 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Vc3S01_A0230 0cf659a476b2207f3cd376a0c8e10efd 306 Gene3D G3DSA:3.40.800.10 1 305 4.0E-104 T 12-10-2018 Vc3S01_A0230 0cf659a476b2207f3cd376a0c8e10efd 306 ProSitePatterns PS01053 Arginase family signature. 229 250 - T 12-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 Vc3S01_A0230 0cf659a476b2207f3cd376a0c8e10efd 306 Pfam PF00491 Arginase family 33 297 1.7E-89 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 Vc3S01_A0230 0cf659a476b2207f3cd376a0c8e10efd 306 TIGRFAM TIGR01230 agmatinase: agmatinase 25 299 3.6E-93 T 12-10-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 Vc3S01_A0230 0cf659a476b2207f3cd376a0c8e10efd 306 SUPERFAMILY SSF52768 12 303 1.98E-94 T 12-10-2018 IPR023696 Ureohydrolase domain superfamily Vc3S01_A0230 0cf659a476b2207f3cd376a0c8e10efd 306 PIRSF PIRSF036979 13 304 2.1E-98 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 Vc3S01_1576 77f26b4974ff06aab59bc29749dcba0b 140 Pfam PF04965 Gene 25-like lysozyme 18 112 3.9E-12 T 12-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD Vc3S01_1576 77f26b4974ff06aab59bc29749dcba0b 140 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 13 129 7.0E-16 T 12-10-2018 IPR017737 Type VI secretion system, lysozyme-related protein Vc3S01_0333 a957732323fc38bd97a3588dbbb01469 139 Pfam PF01894 Uncharacterised protein family UPF0047 19 135 1.1E-39 T 12-10-2018 IPR001602 Uncharacterised protein family UPF0047 Vc3S01_0333 a957732323fc38bd97a3588dbbb01469 139 PIRSF PIRSF004681 1 139 9.4E-48 T 12-10-2018 IPR001602 Uncharacterised protein family UPF0047 Vc3S01_0333 a957732323fc38bd97a3588dbbb01469 139 SUPERFAMILY SSF111038 1 139 2.09E-50 T 12-10-2018 IPR035917 YjbQ-like superfamily Vc3S01_0333 a957732323fc38bd97a3588dbbb01469 139 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 5 139 1.6E-45 T 12-10-2018 IPR001602 Uncharacterised protein family UPF0047 Vc3S01_0333 a957732323fc38bd97a3588dbbb01469 139 Gene3D G3DSA:2.60.120.460 2 139 2.2E-43 T 12-10-2018 IPR035917 YjbQ-like superfamily Vc3S01_0333 a957732323fc38bd97a3588dbbb01469 139 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature. 100 118 - T 12-10-2018 IPR001602 Uncharacterised protein family UPF0047 Vc3S01_0263 da9ff1a4db0e81835b1d47ca61b44152 228 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 193 4.0E-39 T 12-10-2018 Vc3S01_0263 da9ff1a4db0e81835b1d47ca61b44152 228 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 108 121 1.3E-8 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Vc3S01_0263 da9ff1a4db0e81835b1d47ca61b44152 228 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 139 155 1.3E-8 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Vc3S01_0263 da9ff1a4db0e81835b1d47ca61b44152 228 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 157 177 1.3E-8 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Vc3S01_0263 da9ff1a4db0e81835b1d47ca61b44152 228 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 6 17 1.3E-8 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Vc3S01_0263 da9ff1a4db0e81835b1d47ca61b44152 228 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 6 225 35.741 T 12-10-2018 IPR037512 Phosphoglycolate phosphatase, prokaryotic GO:0005975|GO:0008967 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 Vc3S01_0263 da9ff1a4db0e81835b1d47ca61b44152 228 SUPERFAMILY SSF56784 5 224 1.94E-60 T 12-10-2018 IPR036412 HAD-like superfamily Vc3S01_0263 da9ff1a4db0e81835b1d47ca61b44152 228 Gene3D G3DSA:3.40.50.1000 9 216 8.1E-65 T 12-10-2018 IPR023214 HAD superfamily Vc3S01_0263 da9ff1a4db0e81835b1d47ca61b44152 228 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 98 189 6.7E-10 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Vc3S01_0263 da9ff1a4db0e81835b1d47ca61b44152 228 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 82 193 2.1E-14 T 12-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 Vc3S01_0263 da9ff1a4db0e81835b1d47ca61b44152 228 Gene3D G3DSA:1.10.150.240 21 94 8.1E-65 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Vc3S01_0263 da9ff1a4db0e81835b1d47ca61b44152 228 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 9 223 1.8E-61 T 12-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 Vc3S01_0263 da9ff1a4db0e81835b1d47ca61b44152 228 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 79 194 8.3E-11 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Vc3S01_A0487 e6c89ceee26f3170efbe3ae80577d30c 297 Gene3D G3DSA:3.30.1330.60 45 162 2.2E-24 T 12-10-2018 IPR036737 OmpA-like domain superfamily Vc3S01_A0487 e6c89ceee26f3170efbe3ae80577d30c 297 Gene3D G3DSA:3.30.1330.60 175 291 5.6E-25 T 12-10-2018 IPR036737 OmpA-like domain superfamily Vc3S01_A0487 e6c89ceee26f3170efbe3ae80577d30c 297 SUPERFAMILY SSF103088 53 162 4.58E-24 T 12-10-2018 IPR036737 OmpA-like domain superfamily Vc3S01_A0487 e6c89ceee26f3170efbe3ae80577d30c 297 PRINTS PR01021 OMPA domain signature 191 213 2.1E-17 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Vc3S01_A0487 e6c89ceee26f3170efbe3ae80577d30c 297 PRINTS PR01021 OMPA domain signature 220 235 2.1E-17 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Vc3S01_A0487 e6c89ceee26f3170efbe3ae80577d30c 297 PRINTS PR01021 OMPA domain signature 235 251 2.1E-17 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Vc3S01_A0487 e6c89ceee26f3170efbe3ae80577d30c 297 Pfam PF00691 OmpA family 191 285 1.1E-17 T 12-10-2018 IPR006665 OmpA-like domain Vc3S01_A0487 e6c89ceee26f3170efbe3ae80577d30c 297 Pfam PF00691 OmpA family 62 156 1.0E-15 T 12-10-2018 IPR006665 OmpA-like domain Vc3S01_A0487 e6c89ceee26f3170efbe3ae80577d30c 297 SUPERFAMILY SSF103088 167 290 7.19E-26 T 12-10-2018 IPR036737 OmpA-like domain superfamily Vc3S01_A1578 f4699eac1a0f70539986ee32d629cc18 250 SUPERFAMILY SSF51695 2 234 2.07E-71 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 Vc3S01_A1578 f4699eac1a0f70539986ee32d629cc18 250 Gene3D G3DSA:3.20.20.190 1 239 8.4E-77 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 Vc3S01_A1578 f4699eac1a0f70539986ee32d629cc18 250 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 6 232 1.8E-38 T 12-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 Vc3S01_p20157 323b6abaa06d647be6cb0df5a7e913c3 278 SUPERFAMILY SSF56112 12 263 3.93E-33 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily Vc3S01_p20157 323b6abaa06d647be6cb0df5a7e913c3 278 Pfam PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase 10 256 3.1E-109 T 12-10-2018 IPR006748 Aminoglycoside/hydroxyurea antibiotic resistance kinase GO:0006468|GO:0016773|GO:0019748 Vc3S01_3202 ecc61274af970b81f92a0a722a7af5c1 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 60 242 1.6E-25 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Vc3S01_3202 ecc61274af970b81f92a0a722a7af5c1 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 38 136 1.7E-29 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Vc3S01_3202 ecc61274af970b81f92a0a722a7af5c1 246 Gene3D G3DSA:1.10.3720.10 33 242 2.2E-56 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_3202 ecc61274af970b81f92a0a722a7af5c1 246 SUPERFAMILY SSF161098 41 227 2.88E-47 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_3012 88c8bd3d958441f567389303f64ad949 399 SUPERFAMILY SSF52507 1 182 1.44E-60 T 12-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Vc3S01_3012 88c8bd3d958441f567389303f64ad949 399 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 4 395 4.1E-153 T 12-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 Vc3S01_3012 88c8bd3d958441f567389303f64ad949 399 Gene3D G3DSA:3.40.50.1950 1 185 3.1E-55 T 12-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Vc3S01_3012 88c8bd3d958441f567389303f64ad949 399 SUPERFAMILY SSF102645 184 398 7.72E-82 T 12-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 Vc3S01_3012 88c8bd3d958441f567389303f64ad949 399 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 186 371 3.6E-78 T 12-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 Vc3S01_3012 88c8bd3d958441f567389303f64ad949 399 Gene3D G3DSA:3.40.50.10300 186 399 2.2E-85 T 12-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 Vc3S01_3012 88c8bd3d958441f567389303f64ad949 399 Pfam PF02441 Flavoprotein 7 179 2.8E-43 T 12-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 Vc3S01_A0570 2d7e91138a4f65bfa9a06b2e9b6318ce 92 SUPERFAMILY SSF54534 5 89 1.5E-25 T 12-10-2018 Vc3S01_A0570 2d7e91138a4f65bfa9a06b2e9b6318ce 92 Gene3D G3DSA:3.10.50.40 2 92 9.9E-34 T 12-10-2018 Vc3S01_A0570 2d7e91138a4f65bfa9a06b2e9b6318ce 92 Pfam PF13616 PPIC-type PPIASE domain 13 89 1.7E-22 T 12-10-2018 Vc3S01_1549 5df1c7ee3d3f35dfb3ece8fa62441233 238 Gene3D G3DSA:3.40.50.1360 1 238 1.7E-87 T 12-10-2018 Vc3S01_1549 5df1c7ee3d3f35dfb3ece8fa62441233 238 SUPERFAMILY SSF100950 3 237 5.27E-60 T 12-10-2018 IPR037171 NagB/RpiA transferase-like Vc3S01_1549 5df1c7ee3d3f35dfb3ece8fa62441233 238 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 9 225 6.0E-61 T 12-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 Vc3S01_1549 5df1c7ee3d3f35dfb3ece8fa62441233 238 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 9 236 3.4E-53 T 12-10-2018 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 Vc3S01_0509 4b36d3945fe72988b5c614901f93704e 208 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 1 99 6.2E-35 T 12-10-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 Vc3S01_0509 4b36d3945fe72988b5c614901f93704e 208 SUPERFAMILY SSF89069 4 67 2.88E-21 T 12-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 Vc3S01_0509 4b36d3945fe72988b5c614901f93704e 208 Gene3D G3DSA:1.10.10.880 2 67 6.8E-25 T 12-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 Vc3S01_0509 4b36d3945fe72988b5c614901f93704e 208 PIRSF PIRSF016938 1 202 4.2E-34 T 12-10-2018 IPR026279 Sigma-E factor negative regulatory protein RseA GO:0016989 Vc3S01_0509 4b36d3945fe72988b5c614901f93704e 208 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 140 191 1.3E-19 T 12-10-2018 IPR005573 Anti sigma-E protein RseA, C-terminal Vc3S01_A1677 4fcb8198c3fb5e542d244d485f0c3031 497 Gene3D G3DSA:2.20.200.10 99 374 2.3E-109 T 12-10-2018 Vc3S01_A1677 4fcb8198c3fb5e542d244d485f0c3031 497 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 10 484 1.4E-83 T 12-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 Vc3S01_A1677 4fcb8198c3fb5e542d244d485f0c3031 497 SUPERFAMILY SSF56954 1 486 8.63E-94 T 12-10-2018 Vc3S01_A1677 4fcb8198c3fb5e542d244d485f0c3031 497 Pfam PF02321 Outer membrane efflux protein 303 483 1.6E-23 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Vc3S01_A1677 4fcb8198c3fb5e542d244d485f0c3031 497 Pfam PF02321 Outer membrane efflux protein 64 273 5.5E-17 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Vc3S01_A1677 4fcb8198c3fb5e542d244d485f0c3031 497 Gene3D G3DSA:1.20.1600.10 53 486 2.3E-109 T 12-10-2018 Vc3S01_2645 a50b69eb7ef1cd2b2394a1d3af42b680 315 Pfam PF07549 SecD/SecF GG Motif 35 60 8.3E-11 T 12-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site Vc3S01_2645 a50b69eb7ef1cd2b2394a1d3af42b680 315 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 39 285 8.4E-86 T 12-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 Vc3S01_2645 a50b69eb7ef1cd2b2394a1d3af42b680 315 Pfam PF02355 Protein export membrane protein 111 292 1.4E-70 T 12-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial Vc3S01_2645 a50b69eb7ef1cd2b2394a1d3af42b680 315 SUPERFAMILY SSF82866 73 293 4.97E-41 T 12-10-2018 Vc3S01_2645 a50b69eb7ef1cd2b2394a1d3af42b680 315 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 117 282 5.1E-56 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Vc3S01_2645 a50b69eb7ef1cd2b2394a1d3af42b680 315 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 11 296 28.841 T 12-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 Vc3S01_2645 a50b69eb7ef1cd2b2394a1d3af42b680 315 Gene3D G3DSA:1.20.1640.10 105 300 3.6E-12 T 12-10-2018 Vc3S01_2645 a50b69eb7ef1cd2b2394a1d3af42b680 315 PRINTS PR01755 Bacterial translocase SecF protein signature 233 248 3.9E-32 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Vc3S01_2645 a50b69eb7ef1cd2b2394a1d3af42b680 315 PRINTS PR01755 Bacterial translocase SecF protein signature 38 53 3.9E-32 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Vc3S01_2645 a50b69eb7ef1cd2b2394a1d3af42b680 315 PRINTS PR01755 Bacterial translocase SecF protein signature 201 219 3.9E-32 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Vc3S01_2645 a50b69eb7ef1cd2b2394a1d3af42b680 315 PRINTS PR01755 Bacterial translocase SecF protein signature 153 167 3.9E-32 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Vc3S01_A0468 825819c3f7a6c633f13ab762b32b20a5 308 Pfam PF01882 Protein of unknown function DUF58 54 138 2.0E-20 T 12-10-2018 IPR002881 Domain of unknown function DUF58 Vc3S01_A0295 c63a114ece123a124cfd30c319663db0 301 Pfam PF00892 EamA-like transporter family 153 299 2.8E-7 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Vc3S01_A0295 c63a114ece123a124cfd30c319663db0 301 Pfam PF00892 EamA-like transporter family 5 136 2.4E-6 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Vc3S01_A0295 c63a114ece123a124cfd30c319663db0 301 SUPERFAMILY SSF103481 200 299 9.94E-8 T 12-10-2018 Vc3S01_A0295 c63a114ece123a124cfd30c319663db0 301 TIGRFAM TIGR03340 phn_DUF6: phosphonate utilization associated putative membrane protein 4 297 7.8E-105 T 12-10-2018 IPR017725 Phosphonate utilization associated transmembrane protein, putative Vc3S01_A0295 c63a114ece123a124cfd30c319663db0 301 SUPERFAMILY SSF103481 49 140 4.71E-8 T 12-10-2018 Vc3S01_A1672 24ba584ba4901935ffe2a9dfb2fcfbda 308 Gene3D G3DSA:3.40.190.10 169 267 4.7E-26 T 12-10-2018 Vc3S01_A1672 24ba584ba4901935ffe2a9dfb2fcfbda 308 Gene3D G3DSA:1.10.10.10 1 85 1.3E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A1672 24ba584ba4901935ffe2a9dfb2fcfbda 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 2.8E-14 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A1672 24ba584ba4901935ffe2a9dfb2fcfbda 308 SUPERFAMILY SSF46785 2 81 7.48E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A1672 24ba584ba4901935ffe2a9dfb2fcfbda 308 Pfam PF03466 LysR substrate binding domain 94 289 5.2E-9 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_A1672 24ba584ba4901935ffe2a9dfb2fcfbda 308 Gene3D G3DSA:3.40.190.10 88 290 4.7E-26 T 12-10-2018 Vc3S01_A1672 24ba584ba4901935ffe2a9dfb2fcfbda 308 SUPERFAMILY SSF53850 88 293 2.9E-20 T 12-10-2018 Vc3S01_A1672 24ba584ba4901935ffe2a9dfb2fcfbda 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 9.1E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A1672 24ba584ba4901935ffe2a9dfb2fcfbda 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 9.1E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A1672 24ba584ba4901935ffe2a9dfb2fcfbda 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 9.1E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_1948 374060da33dcd8d073de5f068f3ec163 301 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 134 299 6.0E-75 T 12-10-2018 IPR005642 Lysine exporter LysO Vc3S01_1948 374060da33dcd8d073de5f068f3ec163 301 Pfam PF03956 Lysine exporter LysO 112 297 1.8E-51 T 12-10-2018 IPR005642 Lysine exporter LysO Vc3S01_A1282 3e1783b7a63b81cdb8c0b34b2af326b3 293 Pfam PF14412 A nuclease family of the HNH/ENDO VII superfamily with conserved AHH 42 104 3.9E-8 T 12-10-2018 IPR032871 AHH domain-containing protein Vc3S01_A1339 4e92792276845efaf7b2ed6fba1d5a87 156 SUPERFAMILY SSF81573 63 121 1.57E-10 T 12-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily Vc3S01_A1339 4e92792276845efaf7b2ed6fba1d5a87 156 Gene3D G3DSA:1.20.5.620 62 122 1.5E-13 T 12-10-2018 Vc3S01_A1339 4e92792276845efaf7b2ed6fba1d5a87 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 12.726 T 12-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 Vc3S01_A1339 4e92792276845efaf7b2ed6fba1d5a87 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 3.8E-45 T 12-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 Vc3S01_A1339 4e92792276845efaf7b2ed6fba1d5a87 156 Pfam PF00430 ATP synthase B/B' CF(0) 8 137 5.6E-30 T 12-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 Vc3S01_A1278 2ce8f7271fe24dbf0c4d56bbe183cc2e 1201 SUPERFAMILY SSF49313 503 585 1.73E-9 T 12-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 Vc3S01_A1278 2ce8f7271fe24dbf0c4d56bbe183cc2e 1201 SUPERFAMILY SSF49313 16 97 3.71E-9 T 12-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 Vc3S01_A1278 2ce8f7271fe24dbf0c4d56bbe183cc2e 1201 Gene3D G3DSA:2.60.40.10 206 292 1.9E-11 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_A1278 2ce8f7271fe24dbf0c4d56bbe183cc2e 1201 Gene3D G3DSA:2.60.40.10 500 586 2.6E-11 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_A1278 2ce8f7271fe24dbf0c4d56bbe183cc2e 1201 Gene3D G3DSA:2.60.40.10 12 99 4.1E-9 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_A1278 2ce8f7271fe24dbf0c4d56bbe183cc2e 1201 Gene3D G3DSA:2.60.40.10 402 488 3.6E-9 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_A1278 2ce8f7271fe24dbf0c4d56bbe183cc2e 1201 Gene3D G3DSA:2.60.40.10 598 684 1.4E-12 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_A1278 2ce8f7271fe24dbf0c4d56bbe183cc2e 1201 Gene3D G3DSA:2.60.40.10 107 194 5.9E-8 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_A1278 2ce8f7271fe24dbf0c4d56bbe183cc2e 1201 Gene3D G3DSA:2.60.40.10 304 390 2.5E-11 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_A1278 2ce8f7271fe24dbf0c4d56bbe183cc2e 1201 SUPERFAMILY SSF49313 608 683 2.89E-12 T 12-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 Vc3S01_A1278 2ce8f7271fe24dbf0c4d56bbe183cc2e 1201 SUPERFAMILY SSF49313 109 183 1.73E-8 T 12-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 Vc3S01_A1278 2ce8f7271fe24dbf0c4d56bbe183cc2e 1201 SUPERFAMILY SSF49313 405 485 1.26E-8 T 12-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 Vc3S01_A1278 2ce8f7271fe24dbf0c4d56bbe183cc2e 1201 SUPERFAMILY SSF49313 208 285 8.63E-10 T 12-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 Vc3S01_A1278 2ce8f7271fe24dbf0c4d56bbe183cc2e 1201 SUPERFAMILY SSF49313 306 383 1.4E-10 T 12-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 Vc3S01_2639 9ef414d8e49267b9b6ade86f7cc8fd07 107 Gene3D G3DSA:2.60.300.12 2 107 4.6E-38 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Vc3S01_2639 9ef414d8e49267b9b6ade86f7cc8fd07 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 1.4E-37 T 12-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 Vc3S01_2639 9ef414d8e49267b9b6ade86f7cc8fd07 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 12-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 Vc3S01_2639 9ef414d8e49267b9b6ade86f7cc8fd07 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 9.5E-26 T 12-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 Vc3S01_2639 9ef414d8e49267b9b6ade86f7cc8fd07 107 SUPERFAMILY SSF89360 1 96 1.83E-34 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Vc3S01_2639 9ef414d8e49267b9b6ade86f7cc8fd07 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 1.7E-56 T 12-10-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 Vc3S01_A0460 f4d465f23ffb30c5bb686058e88bd5f8 310 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 33 307 7.2E-92 T 12-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 Vc3S01_A0460 f4d465f23ffb30c5bb686058e88bd5f8 310 SUPERFAMILY SSF161098 34 305 1.01E-35 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_A0460 f4d465f23ffb30c5bb686058e88bd5f8 310 Gene3D G3DSA:1.10.3720.10 85 309 4.6E-33 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_A0460 f4d465f23ffb30c5bb686058e88bd5f8 310 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 306 9.8E-24 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Vc3S01_A0151 d1d16a132b18787c53236159fddd3325 255 SUPERFAMILY SSF46785 96 153 7.39E-5 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A0151 d1d16a132b18787c53236159fddd3325 255 SUPERFAMILY SSF47413 6 64 4.55E-5 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Vc3S01_2552 afe071f41364f6f4caea14438dde4bcc 363 Pfam PF01728 FtsJ-like methyltransferase 188 281 2.6E-5 T 12-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 Vc3S01_2552 afe071f41364f6f4caea14438dde4bcc 363 Gene3D G3DSA:3.40.50.150 178 358 4.3E-52 T 12-10-2018 Vc3S01_2552 afe071f41364f6f4caea14438dde4bcc 363 Gene3D G3DSA:3.30.70.2810 1 79 8.0E-33 T 12-10-2018 Vc3S01_2552 afe071f41364f6f4caea14438dde4bcc 363 SUPERFAMILY SSF53335 186 298 1.56E-12 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Vc3S01_2552 afe071f41364f6f4caea14438dde4bcc 363 Gene3D G3DSA:3.30.2300.20 80 177 1.9E-39 T 12-10-2018 Vc3S01_2552 afe071f41364f6f4caea14438dde4bcc 363 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 1 357 83.053 T 12-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 Vc3S01_2552 afe071f41364f6f4caea14438dde4bcc 363 PIRSF PIRSF028774 1 362 1.1E-192 T 12-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 Vc3S01_0986 ad2ab93c218a97b82d4d2dfd9aac0b4b 221 Pfam PF07022 Bacteriophage CI repressor helix-turn-helix domain 16 73 4.8E-12 T 12-10-2018 IPR010744 Bacteriophage CI repressor GO:0003677|GO:0045892 Vc3S01_0986 ad2ab93c218a97b82d4d2dfd9aac0b4b 221 Gene3D G3DSA:1.10.260.40 11 75 3.8E-8 T 12-10-2018 Vc3S01_0986 ad2ab93c218a97b82d4d2dfd9aac0b4b 221 Gene3D G3DSA:2.10.109.10 104 220 5.0E-21 T 12-10-2018 Vc3S01_0986 ad2ab93c218a97b82d4d2dfd9aac0b4b 221 Pfam PF16452 Bacteriophage CI repressor C-terminal domain 113 215 1.9E-22 T 12-10-2018 IPR032499 Bacteriophage CI repressor, C-terminal GO:0051259 Vc3S01_0698 4ce3439a66f05f3cc142d92601d456eb 332 Gene3D G3DSA:1.10.260.40 1 59 4.5E-22 T 12-10-2018 Vc3S01_0698 4ce3439a66f05f3cc142d92601d456eb 332 SUPERFAMILY SSF47413 1 60 1.03E-16 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Vc3S01_0698 4ce3439a66f05f3cc142d92601d456eb 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.1E-7 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Vc3S01_0698 4ce3439a66f05f3cc142d92601d456eb 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.1E-7 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Vc3S01_0698 4ce3439a66f05f3cc142d92601d456eb 332 SUPERFAMILY SSF53822 61 330 3.93E-82 T 12-10-2018 IPR028082 Periplasmic binding protein-like I Vc3S01_0698 4ce3439a66f05f3cc142d92601d456eb 332 SMART SM00354 1 71 2.4E-32 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Vc3S01_0698 4ce3439a66f05f3cc142d92601d456eb 332 Pfam PF13377 Periplasmic binding protein-like domain 168 329 2.9E-36 T 12-10-2018 Vc3S01_0698 4ce3439a66f05f3cc142d92601d456eb 332 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 12-10-2018 Vc3S01_0698 4ce3439a66f05f3cc142d92601d456eb 332 Gene3D G3DSA:3.40.50.2300 160 289 3.6E-72 T 12-10-2018 Vc3S01_0698 4ce3439a66f05f3cc142d92601d456eb 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.5E-18 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Vc3S01_0698 4ce3439a66f05f3cc142d92601d456eb 332 Gene3D G3DSA:3.40.50.2300 63 306 3.6E-72 T 12-10-2018 Vc3S01_0685 06867f4c5ce5b826cedda2773b97afb1 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 70 5.2E-14 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_0685 06867f4c5ce5b826cedda2773b97afb1 310 Pfam PF03466 LysR substrate binding domain 100 299 4.5E-24 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_0685 06867f4c5ce5b826cedda2773b97afb1 310 Gene3D G3DSA:3.40.190.10 175 273 3.3E-44 T 12-10-2018 Vc3S01_0685 06867f4c5ce5b826cedda2773b97afb1 310 Gene3D G3DSA:1.10.10.10 4 92 8.7E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_0685 06867f4c5ce5b826cedda2773b97afb1 310 Gene3D G3DSA:3.40.190.10 101 297 3.3E-44 T 12-10-2018 Vc3S01_0685 06867f4c5ce5b826cedda2773b97afb1 310 SUPERFAMILY SSF46785 7 85 2.52E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_0685 06867f4c5ce5b826cedda2773b97afb1 310 SUPERFAMILY SSF53850 94 301 4.71E-35 T 12-10-2018 Vc3S01_A0220 b794ab3a01cb2558ff1326e90e91cfa9 276 Pfam PF10670 Domain of unknown function (DUF4198) 24 251 1.6E-48 T 12-10-2018 IPR019613 Protein of unknown function DUF4198 Vc3S01_1641 656198c90094c8fa7ca6a1978839f70e 57 ProDom PD051650 RIBOSOME MODULATION FACTOR E FACTOR-RELATED DIMERIZATION BIOGENESIS RIBOSOMES INVOLVED 70S 1 51 1.0E-22 T 12-10-2018 IPR007040 Ribosome modulation factor Vc3S01_1641 656198c90094c8fa7ca6a1978839f70e 57 Hamap MF_00919 Ribosome modulation factor [rmf]. 1 55 29.833 T 12-10-2018 IPR007040 Ribosome modulation factor Vc3S01_1641 656198c90094c8fa7ca6a1978839f70e 57 Gene3D G3DSA:1.10.10.620 1 57 2.7E-29 T 12-10-2018 IPR023200 Ribosome modulation factor domain superfamily Vc3S01_1641 656198c90094c8fa7ca6a1978839f70e 57 Pfam PF04957 Ribosome modulation factor 1 54 2.6E-28 T 12-10-2018 IPR007040 Ribosome modulation factor Vc3S01_A1541 386973514394a727093c4b7c9b667f26 316 Gene3D G3DSA:1.10.287.470 98 162 3.3E-11 T 12-10-2018 Vc3S01_A1541 386973514394a727093c4b7c9b667f26 316 Gene3D G3DSA:2.40.50.100 197 231 4.5E-9 T 12-10-2018 Vc3S01_A1541 386973514394a727093c4b7c9b667f26 316 Gene3D G3DSA:1.10.287.470 169 196 4.5E-9 T 12-10-2018 Vc3S01_A1541 386973514394a727093c4b7c9b667f26 316 Gene3D G3DSA:2.40.30.170 232 308 4.5E-9 T 12-10-2018 Vc3S01_A1541 386973514394a727093c4b7c9b667f26 316 Gene3D G3DSA:2.40.50.100 33 66 7.7E-6 T 12-10-2018 Vc3S01_A1541 386973514394a727093c4b7c9b667f26 316 Pfam PF13437 HlyD family secretion protein 196 276 1.3E-7 T 12-10-2018 Vc3S01_A1541 386973514394a727093c4b7c9b667f26 316 SUPERFAMILY SSF111369 101 158 2.22E-6 T 12-10-2018 Vc3S01_A1541 386973514394a727093c4b7c9b667f26 316 Gene3D G3DSA:1.10.287.470 67 86 7.7E-6 T 12-10-2018 Vc3S01_1713 781c2a72f756b207d93b25a6c8bc3dd4 288 PIRSF PIRSF006221 1 288 8.1E-109 T 12-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 Vc3S01_1713 781c2a72f756b207d93b25a6c8bc3dd4 288 Gene3D G3DSA:3.90.1200.10 98 288 3.8E-68 T 12-10-2018 Vc3S01_1713 781c2a72f756b207d93b25a6c8bc3dd4 288 SUPERFAMILY SSF56112 3 282 5.61E-43 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily Vc3S01_1713 781c2a72f756b207d93b25a6c8bc3dd4 288 Gene3D G3DSA:3.30.200.20 1 93 1.3E-21 T 12-10-2018 Vc3S01_1713 781c2a72f756b207d93b25a6c8bc3dd4 288 Pfam PF03881 Fructosamine kinase 1 286 4.1E-125 T 12-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 Vc3S01_1015 11f71da5a8ee950ad455312dc53a3e59 397 Gene3D G3DSA:2.40.128.260 210 330 1.9E-35 T 12-10-2018 Vc3S01_1015 11f71da5a8ee950ad455312dc53a3e59 397 Gene3D G3DSA:2.40.128.260 331 397 2.1E-6 T 12-10-2018 Vc3S01_1015 11f71da5a8ee950ad455312dc53a3e59 397 Pfam PF03743 Bacterial conjugation TrbI-like protein 215 389 1.9E-42 T 12-10-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI Vc3S01_2063 11b817523ed428a81204e56e07aa4247 172 Pfam PF12915 Protein of unknown function (DUF3833) 11 171 2.9E-65 T 12-10-2018 IPR024409 Protein of unknown function DUF3833 Vc3S01_0867 b1552d38402a877e643a8dcf5bdabdea 376 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 7 353 4.1E-134 T 12-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 Vc3S01_0867 b1552d38402a877e643a8dcf5bdabdea 376 Gene3D G3DSA:3.40.1690.10 218 359 2.5E-57 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal Vc3S01_0867 b1552d38402a877e643a8dcf5bdabdea 376 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 347 3.1E-121 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Vc3S01_0867 b1552d38402a877e643a8dcf5bdabdea 376 SUPERFAMILY SSF160544 250 355 8.24E-40 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal Vc3S01_0867 b1552d38402a877e643a8dcf5bdabdea 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 7.1E-40 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Vc3S01_0867 b1552d38402a877e643a8dcf5bdabdea 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 7.1E-40 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Vc3S01_0867 b1552d38402a877e643a8dcf5bdabdea 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 7.1E-40 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Vc3S01_0867 b1552d38402a877e643a8dcf5bdabdea 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 7.1E-40 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Vc3S01_0867 b1552d38402a877e643a8dcf5bdabdea 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 7.1E-40 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Vc3S01_0253 80efae1066337e81a75c3fd4b2b62701 429 Pfam PF13167 GTP-binding GTPase N-terminal 25 112 8.7E-31 T 12-10-2018 IPR025121 GTPase HflX, N-terminal Vc3S01_0253 80efae1066337e81a75c3fd4b2b62701 429 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 361 1.7E-156 T 12-10-2018 IPR016496 GTPase HflX GO:0005525 Vc3S01_0253 80efae1066337e81a75c3fd4b2b62701 429 SUPERFAMILY SSF54980 364 427 1.87E-17 T 12-10-2018 IPR035647 EF-G domain III/V-like Vc3S01_0253 80efae1066337e81a75c3fd4b2b62701 429 SUPERFAMILY SSF52540 197 372 1.01E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0253 80efae1066337e81a75c3fd4b2b62701 429 Hamap MF_00900 GTPase HflX [hflX]. 27 390 48.245 T 12-10-2018 IPR016496 GTPase HflX GO:0005525 Vc3S01_0253 80efae1066337e81a75c3fd4b2b62701 429 Pfam PF01926 50S ribosome-binding GTPase 200 318 2.1E-21 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Vc3S01_0253 80efae1066337e81a75c3fd4b2b62701 429 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 1.1E-28 T 12-10-2018 IPR032305 GTP-binding protein, middle domain Vc3S01_0253 80efae1066337e81a75c3fd4b2b62701 429 Gene3D G3DSA:3.40.50.11060 18 138 6.1E-37 T 12-10-2018 Vc3S01_0253 80efae1066337e81a75c3fd4b2b62701 429 Gene3D G3DSA:3.40.50.300 197 371 2.9E-43 T 12-10-2018 Vc3S01_0253 80efae1066337e81a75c3fd4b2b62701 429 PIRSF PIRSF006809 3 422 1.6E-151 T 12-10-2018 IPR016496 GTPase HflX GO:0005525 Vc3S01_0253 80efae1066337e81a75c3fd4b2b62701 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 3.9E-10 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Vc3S01_0253 80efae1066337e81a75c3fd4b2b62701 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 3.9E-10 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Vc3S01_0253 80efae1066337e81a75c3fd4b2b62701 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 3.9E-10 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Vc3S01_2159 be48060f5e177968a5aa8fd6056e8283 193 ProDom PD023059 PLASMID TYPE PROTEINS YOP III YSCK VIRULENCE K TRANSLOCATION PSCK 3 192 3.0E-62 T 12-10-2018 IPR009510 Type III secretion system, secretion protein K GO:0009405 Vc3S01_2159 be48060f5e177968a5aa8fd6056e8283 193 Pfam PF06578 YOP proteins translocation protein K (YscK) 2 193 1.5E-57 T 12-10-2018 IPR009510 Type III secretion system, secretion protein K GO:0009405 Vc3S01_1561 795a87391923648c3c0902917b9e5f1b 325 Gene3D G3DSA:3.40.190.150 30 314 3.5E-59 T 12-10-2018 Vc3S01_1561 795a87391923648c3c0902917b9e5f1b 325 Gene3D G3DSA:3.40.190.10 123 249 3.5E-59 T 12-10-2018 Vc3S01_1561 795a87391923648c3c0902917b9e5f1b 325 PIRSF PIRSF017082 2 324 3.2E-85 T 12-10-2018 IPR005064 Bordetella uptake gene GO:0030288 Vc3S01_1561 795a87391923648c3c0902917b9e5f1b 325 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 66 320 2.1E-26 T 12-10-2018 IPR005064 Bordetella uptake gene GO:0030288 Vc3S01_1561 795a87391923648c3c0902917b9e5f1b 325 SUPERFAMILY SSF53850 104 289 1.81E-9 T 12-10-2018 Vc3S01_A0137 c866f30961824d48b5fea2df6c9ec812 392 SMART SM00495 349 392 9.0E-8 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 Vc3S01_A0137 c866f30961824d48b5fea2df6c9ec812 392 Gene3D G3DSA:2.70.50.50 26 219 9.8E-64 T 12-10-2018 Vc3S01_A0137 c866f30961824d48b5fea2df6c9ec812 392 Gene3D G3DSA:2.10.10.20 349 392 3.9E-19 T 12-10-2018 Vc3S01_A0137 c866f30961824d48b5fea2df6c9ec812 392 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 26 214 3.6E-36 T 12-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal Vc3S01_A0137 c866f30961824d48b5fea2df6c9ec812 392 SUPERFAMILY SSF81296 26 217 1.68E-49 T 12-10-2018 IPR014756 Immunoglobulin E-set Vc3S01_A0137 c866f30961824d48b5fea2df6c9ec812 392 SUPERFAMILY SSF51055 343 389 1.18E-13 T 12-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 Vc3S01_A1347 4c757c5971b4451ac4614ea733209ade 320 Pfam PF01882 Protein of unknown function DUF58 58 143 8.2E-20 T 12-10-2018 IPR002881 Domain of unknown function DUF58 Vc3S01_A1139 b6155ef09be4b9c486634f047e160bfb 97 Gene3D G3DSA:1.10.10.10 2 97 6.8E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A1139 b6155ef09be4b9c486634f047e160bfb 97 Pfam PF01022 Bacterial regulatory protein, arsR family 21 66 6.1E-9 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Vc3S01_A1139 b6155ef09be4b9c486634f047e160bfb 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 48 63 3.8E-8 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Vc3S01_A1139 b6155ef09be4b9c486634f047e160bfb 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 63 78 3.8E-8 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Vc3S01_A1139 b6155ef09be4b9c486634f047e160bfb 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 16 31 3.8E-8 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Vc3S01_A1139 b6155ef09be4b9c486634f047e160bfb 97 SUPERFAMILY SSF46785 9 95 3.05E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A1139 b6155ef09be4b9c486634f047e160bfb 97 SMART SM00418 14 91 8.2E-16 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Vc3S01_1695 5f6773f0d2eccb714b49052419950c73 239 SMART SM00382 29 201 2.5E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_1695 5f6773f0d2eccb714b49052419950c73 239 Pfam PF00005 ABC transporter 25 165 2.8E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_1695 5f6773f0d2eccb714b49052419950c73 239 Gene3D G3DSA:3.40.50.300 2 229 2.1E-51 T 12-10-2018 Vc3S01_1695 5f6773f0d2eccb714b49052419950c73 239 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_1695 5f6773f0d2eccb714b49052419950c73 239 SUPERFAMILY SSF52540 5 216 4.28E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2320 452bfebd6badfcca8eb499c354ffa306 619 SUPERFAMILY SSF109998 39 245 8.63E-39 T 12-10-2018 IPR027304 Trigger factor/SurA domain superfamily Vc3S01_2320 452bfebd6badfcca8eb499c354ffa306 619 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 299 320 - T 12-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 Vc3S01_2320 452bfebd6badfcca8eb499c354ffa306 619 Gene3D G3DSA:3.10.50.40 261 387 4.9E-33 T 12-10-2018 Vc3S01_2320 452bfebd6badfcca8eb499c354ffa306 619 Pfam PF13624 SurA N-terminal domain 1 166 4.6E-51 T 12-10-2018 Vc3S01_2320 452bfebd6badfcca8eb499c354ffa306 619 Pfam PF13616 PPIC-type PPIASE domain 262 361 2.1E-24 T 12-10-2018 Vc3S01_2320 452bfebd6badfcca8eb499c354ffa306 619 Gene3D G3DSA:1.10.4030.30 39 191 1.5E-14 T 12-10-2018 Vc3S01_2320 452bfebd6badfcca8eb499c354ffa306 619 SUPERFAMILY SSF54534 225 361 5.95E-32 T 12-10-2018 Vc3S01_p30006 ff4e652eef51aed8f20384acc09fc379 376 Gene3D G3DSA:2.180.10.10 36 115 4.7E-9 T 12-10-2018 Vc3S01_p30006 ff4e652eef51aed8f20384acc09fc379 376 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 48 116 3.6E-17 T 12-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 Vc3S01_2198 07f7d4d5dad430ee925c965f740865b9 173 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 12-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 Vc3S01_2198 07f7d4d5dad430ee925c965f740865b9 173 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 2.6E-63 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Vc3S01_2198 07f7d4d5dad430ee925c965f740865b9 173 Gene3D G3DSA:3.30.420.10 2 159 6.2E-53 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Vc3S01_2198 07f7d4d5dad430ee925c965f740865b9 173 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 47.893 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Vc3S01_2198 07f7d4d5dad430ee925c965f740865b9 173 SUPERFAMILY SSF53098 3 156 3.54E-55 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Vc3S01_2198 07f7d4d5dad430ee925c965f740865b9 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 1.8E-42 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Vc3S01_2198 07f7d4d5dad430ee925c965f740865b9 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 1.8E-42 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Vc3S01_2198 07f7d4d5dad430ee925c965f740865b9 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 1.8E-42 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Vc3S01_2198 07f7d4d5dad430ee925c965f740865b9 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 1.8E-42 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Vc3S01_2198 07f7d4d5dad430ee925c965f740865b9 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 1.8E-42 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Vc3S01_2198 07f7d4d5dad430ee925c965f740865b9 173 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 155 1.4E-74 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Vc3S01_A0777 15e6e35ae92f9c87d5d8be6998ce7a35 292 Gene3D G3DSA:3.40.190.290 93 282 9.0E-35 T 12-10-2018 Vc3S01_A0777 15e6e35ae92f9c87d5d8be6998ce7a35 292 Pfam PF03466 LysR substrate binding domain 110 287 1.2E-14 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_A0777 15e6e35ae92f9c87d5d8be6998ce7a35 292 Gene3D G3DSA:1.10.10.10 1 88 8.8E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A0777 15e6e35ae92f9c87d5d8be6998ce7a35 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 2.4E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A0777 15e6e35ae92f9c87d5d8be6998ce7a35 292 SUPERFAMILY SSF53850 92 289 1.99E-21 T 12-10-2018 Vc3S01_A0777 15e6e35ae92f9c87d5d8be6998ce7a35 292 SUPERFAMILY SSF46785 1 87 3.63E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A1812 64eea8c0546460f3ec7a01b40113aeea 292 Gene3D G3DSA:3.30.479.10 152 291 8.3E-6 T 12-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 Vc3S01_A1812 64eea8c0546460f3ec7a01b40113aeea 292 SUPERFAMILY SSF55620 3 154 4.39E-31 T 12-10-2018 Vc3S01_A1812 64eea8c0546460f3ec7a01b40113aeea 292 SUPERFAMILY SSF55620 153 291 4.11E-23 T 12-10-2018 Vc3S01_A1812 64eea8c0546460f3ec7a01b40113aeea 292 Gene3D G3DSA:3.30.479.10 12 151 6.8E-24 T 12-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 Vc3S01_A1812 64eea8c0546460f3ec7a01b40113aeea 292 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 149 283 1.4E-7 T 12-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 Vc3S01_A1812 64eea8c0546460f3ec7a01b40113aeea 292 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 24 132 1.1E-8 T 12-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 Vc3S01_A0562 55c7f2006f4ccbfef05569abe888cb47 232 Pfam PF01618 MotA/TolQ/ExbB proton channel family 95 194 3.7E-22 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Vc3S01_2976 6fe57d7cbe942f209d5a52fa031e5bcb 326 Pfam PF00535 Glycosyl transferase family 2 4 120 8.0E-21 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Vc3S01_2976 6fe57d7cbe942f209d5a52fa031e5bcb 326 Gene3D G3DSA:3.90.550.10 1 241 8.8E-34 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Vc3S01_2976 6fe57d7cbe942f209d5a52fa031e5bcb 326 SUPERFAMILY SSF53448 3 219 5.81E-35 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Vc3S01_0511 dd0a1dc48e67144ddaef56681594cfa1 156 PIRSF PIRSF004923 1 156 2.6E-38 T 12-10-2018 IPR026268 Protein RseC Vc3S01_0511 dd0a1dc48e67144ddaef56681594cfa1 156 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 19 149 6.6E-32 T 12-10-2018 Vc3S01_A1910 57ccb23f8ebf4c70c030ff6b55ceeae2 381 Gene3D G3DSA:3.40.50.150 109 373 3.2E-96 T 12-10-2018 Vc3S01_A1910 57ccb23f8ebf4c70c030ff6b55ceeae2 381 PIRSF PIRSF003085 5 380 8.6E-114 T 12-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 Vc3S01_A1910 57ccb23f8ebf4c70c030ff6b55ceeae2 381 Pfam PF02353 Mycolic acid cyclopropane synthetase 108 365 4.7E-89 T 12-10-2018 Vc3S01_A1910 57ccb23f8ebf4c70c030ff6b55ceeae2 381 SUPERFAMILY SSF53335 111 369 1.8E-72 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Vc3S01_3134 7faccd4dc858705fa9e51cf79df004fd 203 SUPERFAMILY SSF51569 3 201 1.08E-66 T 12-10-2018 Vc3S01_3134 7faccd4dc858705fa9e51cf79df004fd 203 Pfam PF01081 KDPG and KHG aldolase 5 197 1.0E-73 T 12-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 Vc3S01_3134 7faccd4dc858705fa9e51cf79df004fd 203 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 124 137 - T 12-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 Vc3S01_3134 7faccd4dc858705fa9e51cf79df004fd 203 Gene3D G3DSA:3.20.20.70 1 203 9.1E-74 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_3134 7faccd4dc858705fa9e51cf79df004fd 203 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 36 45 - T 12-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 Vc3S01_3134 7faccd4dc858705fa9e51cf79df004fd 203 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 5 202 4.3E-83 T 12-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 Vc3S01_p30054 5e32c38b4e743c4d8de88555084d52c3 961 Gene3D G3DSA:2.180.10.10 1 689 6.8E-259 T 12-10-2018 Vc3S01_p30054 5e32c38b4e743c4d8de88555084d52c3 961 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 610 689 2.4E-26 T 12-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 Vc3S01_1998 39db5b83fdad59618c6fc96d51e29131 401 ProSitePatterns PS00216 Sugar transport proteins signature 1. 60 77 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Vc3S01_1998 39db5b83fdad59618c6fc96d51e29131 401 Gene3D G3DSA:1.20.1720.10 6 385 1.8E-77 T 12-10-2018 Vc3S01_1998 39db5b83fdad59618c6fc96d51e29131 401 Pfam PF07690 Major Facilitator Superfamily 12 218 1.4E-31 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Vc3S01_1998 39db5b83fdad59618c6fc96d51e29131 401 SUPERFAMILY SSF103473 4 393 7.32E-53 T 12-10-2018 IPR036259 MFS transporter superfamily Vc3S01_0499 d51a8cd3747937813f6ff6268ad8bb27 192 Pfam PF03695 Uncharacterised protein family (UPF0149) 12 179 1.9E-35 T 12-10-2018 IPR011978 Uncharacterised protein family UPF0149 Vc3S01_0499 d51a8cd3747937813f6ff6268ad8bb27 192 Gene3D G3DSA:1.20.120.740 4 192 1.2E-47 T 12-10-2018 Vc3S01_0499 d51a8cd3747937813f6ff6268ad8bb27 192 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 5 190 32.548 T 12-10-2018 IPR011978 Uncharacterised protein family UPF0149 Vc3S01_0499 d51a8cd3747937813f6ff6268ad8bb27 192 SUPERFAMILY SSF101327 6 178 6.15E-46 T 12-10-2018 IPR036255 YgfB-like superfamily Vc3S01_A0060 e38cc46550a8d5f30dfe17a17290701b 510 Pfam PF00916 Sulfate permease family 2 363 1.8E-53 T 12-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 Vc3S01_A0060 e38cc46550a8d5f30dfe17a17290701b 510 SUPERFAMILY SSF52091 403 492 1.33E-11 T 12-10-2018 IPR036513 STAS domain superfamily Vc3S01_A0060 e38cc46550a8d5f30dfe17a17290701b 510 Pfam PF01740 STAS domain 402 489 5.5E-6 T 12-10-2018 IPR002645 STAS domain Vc3S01_A0060 e38cc46550a8d5f30dfe17a17290701b 510 Gene3D G3DSA:3.30.750.24 396 487 1.7E-24 T 12-10-2018 IPR036513 STAS domain superfamily Vc3S01_1538 dbceecac60492ac5346b06adeae9eab2 594 Pfam PF01935 Domain of unknown function DUF87 129 320 1.2E-15 T 12-10-2018 IPR002789 Helicase HerA, central domain Vc3S01_1538 dbceecac60492ac5346b06adeae9eab2 594 SUPERFAMILY SSF52540 120 571 1.54E-27 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_1538 dbceecac60492ac5346b06adeae9eab2 594 Gene3D G3DSA:3.40.50.300 113 272 5.4E-20 T 12-10-2018 Vc3S01_1538 dbceecac60492ac5346b06adeae9eab2 594 Gene3D G3DSA:3.40.50.300 355 580 4.2E-42 T 12-10-2018 Vc3S01_2735 4cd5c09b97a9eb857819fa93b9ed4536 258 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 38.791 T 12-10-2018 IPR005583 Peroxide stress protein YaaA Vc3S01_2735 4cd5c09b97a9eb857819fa93b9ed4536 258 Pfam PF03883 Peroxide stress protein YaaA 1 243 1.2E-93 T 12-10-2018 IPR005583 Peroxide stress protein YaaA Vc3S01_2677 ed572da5139a4ef64d221fa540789c7c 110 Gene3D G3DSA:3.30.429.10 1 110 3.5E-44 T 12-10-2018 IPR014347 Tautomerase/MIF superfamily Vc3S01_2677 ed572da5139a4ef64d221fa540789c7c 110 Pfam PF08921 Domain of unknown function (DUF1904) 1 109 1.2E-37 T 12-10-2018 IPR015017 Protein of unknown function DUF1904 Vc3S01_2677 ed572da5139a4ef64d221fa540789c7c 110 SUPERFAMILY SSF55331 1 110 1.07E-37 T 12-10-2018 IPR014347 Tautomerase/MIF superfamily Vc3S01_p40013 3fda52fdea29248d004fe56d4e0e8bcf 209 SMART SM00530 12 67 3.0E-10 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Vc3S01_p40013 3fda52fdea29248d004fe56d4e0e8bcf 209 Gene3D G3DSA:2.10.109.10 93 207 2.4E-9 T 12-10-2018 Vc3S01_p40013 3fda52fdea29248d004fe56d4e0e8bcf 209 SUPERFAMILY SSF47413 8 72 6.14E-16 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Vc3S01_p40013 3fda52fdea29248d004fe56d4e0e8bcf 209 Pfam PF01381 Helix-turn-helix 13 63 5.3E-11 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Vc3S01_p40013 3fda52fdea29248d004fe56d4e0e8bcf 209 SUPERFAMILY SSF51306 86 204 3.14E-18 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Vc3S01_p40013 3fda52fdea29248d004fe56d4e0e8bcf 209 Gene3D G3DSA:1.10.260.40 4 92 8.1E-16 T 12-10-2018 Vc3S01_1099 1f3d1896999545fdc324a8aa1a4e792b 209 Pfam PF02223 Thymidylate kinase 8 198 2.6E-58 T 12-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 Vc3S01_1099 1f3d1896999545fdc324a8aa1a4e792b 209 ProSitePatterns PS01331 Thymidylate kinase signature. 95 107 - T 12-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 Vc3S01_1099 1f3d1896999545fdc324a8aa1a4e792b 209 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 198 6.5E-62 T 12-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 Vc3S01_1099 1f3d1896999545fdc324a8aa1a4e792b 209 Gene3D G3DSA:3.40.50.300 3 208 1.6E-62 T 12-10-2018 Vc3S01_1099 1f3d1896999545fdc324a8aa1a4e792b 209 SUPERFAMILY SSF52540 1 206 9.38E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_1099 1f3d1896999545fdc324a8aa1a4e792b 209 Hamap MF_00165 Thymidylate kinase [tmk]. 4 206 27.17 T 12-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 Vc3S01_1408 916f2026cd497df64a24ee1d40a4a337 568 SMART SM00052 314 560 3.5E-69 T 12-10-2018 IPR001633 EAL domain Vc3S01_1408 916f2026cd497df64a24ee1d40a4a337 568 Pfam PF00990 Diguanylate cyclase, GGDEF domain 146 299 2.1E-15 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_1408 916f2026cd497df64a24ee1d40a4a337 568 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 21 139 2.9E-13 T 12-10-2018 IPR000014 PAS domain Vc3S01_1408 916f2026cd497df64a24ee1d40a4a337 568 Gene3D G3DSA:3.30.450.20 16 131 1.3E-17 T 12-10-2018 Vc3S01_1408 916f2026cd497df64a24ee1d40a4a337 568 Pfam PF08447 PAS fold 45 115 4.2E-12 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 Vc3S01_1408 916f2026cd497df64a24ee1d40a4a337 568 SUPERFAMILY SSF141868 319 564 2.62E-73 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_1408 916f2026cd497df64a24ee1d40a4a337 568 SUPERFAMILY SSF55073 153 306 2.67E-18 T 12-10-2018 IPR029787 Nucleotide cyclase Vc3S01_1408 916f2026cd497df64a24ee1d40a4a337 568 Pfam PF00563 EAL domain 322 555 1.9E-64 T 12-10-2018 IPR001633 EAL domain Vc3S01_1408 916f2026cd497df64a24ee1d40a4a337 568 SUPERFAMILY SSF55785 27 137 9.07E-18 T 12-10-2018 IPR035965 PAS domain superfamily Vc3S01_1408 916f2026cd497df64a24ee1d40a4a337 568 Gene3D G3DSA:3.30.70.270 145 315 1.3E-20 T 12-10-2018 Vc3S01_1408 916f2026cd497df64a24ee1d40a4a337 568 SMART SM00086 95 135 4.9E-4 T 12-10-2018 IPR001610 PAC motif Vc3S01_1408 916f2026cd497df64a24ee1d40a4a337 568 Gene3D G3DSA:3.20.20.450 316 566 2.6E-79 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_1408 916f2026cd497df64a24ee1d40a4a337 568 SMART SM00267 135 304 8.0E-8 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_2295 f1e040eac94bf4ceee902c1b9fd379e9 105 Pfam PF06844 Protein of unknown function (DUF1244) 35 101 6.1E-36 T 12-10-2018 IPR023163 SMc04008-like domain Vc3S01_2295 f1e040eac94bf4ceee902c1b9fd379e9 105 Gene3D G3DSA:1.10.3340.10 4 105 5.5E-46 T 12-10-2018 IPR036810 SMc04008-like superfamily Vc3S01_2295 f1e040eac94bf4ceee902c1b9fd379e9 105 SUPERFAMILY SSF158757 8 85 1.96E-36 T 12-10-2018 IPR036810 SMc04008-like superfamily Vc3S01_A1991 31c76489425df797d95d8df0699a35a0 710 SUPERFAMILY SSF117281 533 693 1.07E-5 T 12-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 Vc3S01_A1991 31c76489425df797d95d8df0699a35a0 710 Gene3D G3DSA:2.60.40.10 56 133 2.5E-18 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_A1991 31c76489425df797d95d8df0699a35a0 710 Gene3D G3DSA:2.60.40.10 235 310 1.1E-20 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_A1991 31c76489425df797d95d8df0699a35a0 710 Gene3D G3DSA:2.60.40.10 149 228 2.3E-20 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_A1991 31c76489425df797d95d8df0699a35a0 710 Pfam PF16403 Domain of unknown function (DUF5011) 58 131 3.7E-22 T 12-10-2018 IPR032179 Domain of unknown function DUF5011 Vc3S01_A1991 31c76489425df797d95d8df0699a35a0 710 Pfam PF16403 Domain of unknown function (DUF5011) 152 225 7.8E-23 T 12-10-2018 IPR032179 Domain of unknown function DUF5011 Vc3S01_A1991 31c76489425df797d95d8df0699a35a0 710 Pfam PF16403 Domain of unknown function (DUF5011) 238 309 4.0E-23 T 12-10-2018 IPR032179 Domain of unknown function DUF5011 Vc3S01_p10032 963687d76689db772aa9fb2e4e16009d 160 Pfam PF03230 Antirestriction protein 62 156 1.0E-13 T 12-10-2018 IPR004914 Antirestriction protein Vc3S01_p10032 963687d76689db772aa9fb2e4e16009d 160 Gene3D G3DSA:1.10.472.120 7 157 1.9E-26 T 12-10-2018 Vc3S01_p10032 963687d76689db772aa9fb2e4e16009d 160 ProDom PD012854 PLASMID KLCA ANTIRESTRICTION YFJX YCIB ARDB STABLE YFEB Z1216 C0275 66 156 0.004 T 12-10-2018 IPR004914 Antirestriction protein Vc3S01_A1605 ab5d255fb5f7efa6c26e7e793e2bcc73 157 SUPERFAMILY SSF52833 1 156 1.62E-34 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Vc3S01_A1605 ab5d255fb5f7efa6c26e7e793e2bcc73 157 Gene3D G3DSA:3.40.30.10 2 157 7.5E-59 T 12-10-2018 Vc3S01_A1605 ab5d255fb5f7efa6c26e7e793e2bcc73 157 Pfam PF08534 Redoxin 3 154 1.6E-37 T 12-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 Vc3S01_1248 cd9124f857fbf7b00e7e5e36c8883dba 364 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 41 328 9.6E-71 T 12-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 Vc3S01_1248 cd9124f857fbf7b00e7e5e36c8883dba 364 Gene3D G3DSA:3.40.190.170 39 349 1.5E-116 T 12-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily Vc3S01_1248 cd9124f857fbf7b00e7e5e36c8883dba 364 Gene3D G3DSA:3.40.190.10 157 328 1.5E-116 T 12-10-2018 Vc3S01_1248 cd9124f857fbf7b00e7e5e36c8883dba 364 PIRSF PIRSF039026 4 363 1.7E-140 T 12-10-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like Vc3S01_1260 0b80ba3cd8469c8777bd30d0f5400a81 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 243 256 - T 12-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Vc3S01_1260 0b80ba3cd8469c8777bd30d0f5400a81 396 PRINTS PR00799 Aspartate aminotransferase signature 175 194 1.6E-38 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 Vc3S01_1260 0b80ba3cd8469c8777bd30d0f5400a81 396 PRINTS PR00799 Aspartate aminotransferase signature 206 218 1.6E-38 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 Vc3S01_1260 0b80ba3cd8469c8777bd30d0f5400a81 396 PRINTS PR00799 Aspartate aminotransferase signature 341 359 1.6E-38 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 Vc3S01_1260 0b80ba3cd8469c8777bd30d0f5400a81 396 PRINTS PR00799 Aspartate aminotransferase signature 273 298 1.6E-38 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 Vc3S01_1260 0b80ba3cd8469c8777bd30d0f5400a81 396 Gene3D G3DSA:3.40.640.10 60 300 1.8E-159 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Vc3S01_1260 0b80ba3cd8469c8777bd30d0f5400a81 396 Gene3D G3DSA:3.90.1150.10 5 392 1.8E-159 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Vc3S01_1260 0b80ba3cd8469c8777bd30d0f5400a81 396 SUPERFAMILY SSF53383 1 395 2.38E-111 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Vc3S01_1260 0b80ba3cd8469c8777bd30d0f5400a81 396 Pfam PF00155 Aminotransferase class I and II 27 391 3.9E-82 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Vc3S01_2332 28d50f9319c3cf28353e74ab97b8fb52 489 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 5 475 45.149 T 12-10-2018 IPR003846 Uncharacterised protein family UPF0061 Vc3S01_2332 28d50f9319c3cf28353e74ab97b8fb52 489 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 7 458 1.2E-154 T 12-10-2018 IPR003846 Uncharacterised protein family UPF0061 Vc3S01_A0874 85cf7c17b79e84e71354efe53ca52b21 127 SUPERFAMILY SSF46955 4 118 1.21E-26 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily Vc3S01_A0874 85cf7c17b79e84e71354efe53ca52b21 127 Gene3D G3DSA:1.10.1660.10 1 127 3.0E-27 T 12-10-2018 Vc3S01_A0874 85cf7c17b79e84e71354efe53ca52b21 127 Pfam PF00376 MerR family regulatory protein 5 40 3.9E-10 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Vc3S01_A0874 85cf7c17b79e84e71354efe53ca52b21 127 Pfam PF09278 MerR, DNA binding 47 110 3.0E-17 T 12-10-2018 IPR015358 Transcription regulator MerR, DNA binding Vc3S01_A0874 85cf7c17b79e84e71354efe53ca52b21 127 SMART SM00422 4 71 1.2E-19 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Vc3S01_0189 2575495aef871798a88862dcd2069eba 98 SUPERFAMILY SSF46689 8 98 1.84E-24 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_0189 2575495aef871798a88862dcd2069eba 98 Hamap MF_00166 DNA-binding protein Fis [fis]. 1 98 31.402 T 12-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 Vc3S01_0189 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 57 69 2.0E-31 T 12-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 Vc3S01_0189 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 9 26 2.0E-31 T 12-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 Vc3S01_0189 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 26 42 2.0E-31 T 12-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 Vc3S01_0189 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 42 57 2.0E-31 T 12-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 Vc3S01_0189 2575495aef871798a88862dcd2069eba 98 PIRSF PIRSF002097 1 98 2.6E-44 T 12-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 Vc3S01_0189 2575495aef871798a88862dcd2069eba 98 Pfam PF02954 Bacterial regulatory protein, Fis family 55 95 4.0E-14 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Vc3S01_0189 2575495aef871798a88862dcd2069eba 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 61 78 3.3E-13 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Vc3S01_0189 2575495aef871798a88862dcd2069eba 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 78 98 3.3E-13 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Vc3S01_0189 2575495aef871798a88862dcd2069eba 98 Gene3D G3DSA:1.10.10.60 1 98 2.7E-32 T 12-10-2018 Vc3S01_A1001 e6395aeffecd5fc786d6c772de1db0a0 408 Pfam PF05684 Protein of unknown function (DUF819) 11 401 5.0E-97 T 12-10-2018 IPR008537 Protein of unknown function DUF819 Vc3S01_A1001 e6395aeffecd5fc786d6c772de1db0a0 408 PRINTS PR00173 Glutamate-aspartate symporter signature 92 117 5.1E-5 T 12-10-2018 Vc3S01_A1001 e6395aeffecd5fc786d6c772de1db0a0 408 PRINTS PR00173 Glutamate-aspartate symporter signature 349 375 5.1E-5 T 12-10-2018 Vc3S01_A1001 e6395aeffecd5fc786d6c772de1db0a0 408 PRINTS PR00173 Glutamate-aspartate symporter signature 4 24 5.1E-5 T 12-10-2018 Vc3S01_1560 156f8c910704ffe861ecda2afd44bcaa 164 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 20 155 7.1E-16 T 12-10-2018 IPR009936 Protein of unknown function DUF1468 Vc3S01_1785 e3ab094e6180780d79cadc5c0d232f68 311 Gene3D G3DSA:3.40.50.12370 1 311 3.6E-83 T 12-10-2018 Vc3S01_1785 e3ab094e6180780d79cadc5c0d232f68 311 SUPERFAMILY SSF52402 151 308 4.94E-20 T 12-10-2018 Vc3S01_1785 e3ab094e6180780d79cadc5c0d232f68 311 SUPERFAMILY SSF52402 1 142 1.26E-9 T 12-10-2018 Vc3S01_1785 e3ab094e6180780d79cadc5c0d232f68 311 Pfam PF00582 Universal stress protein family 151 301 2.8E-15 T 12-10-2018 IPR006016 UspA Vc3S01_0968 c3a2cfbc5575253e86d2db4345807d5c 332 Pfam PF04245 37-kD nucleoid-associated bacterial protein 9 326 1.7E-101 T 12-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 Vc3S01_0968 c3a2cfbc5575253e86d2db4345807d5c 332 Hamap MF_00730 Nucleoid-associated protein YejK [yejK]. 3 332 46.687 T 12-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 Vc3S01_A0752 679164f77f19de508a07a32cc609b78c 157 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 24 59 5.4E-10 T 12-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 Vc3S01_A0752 679164f77f19de508a07a32cc609b78c 157 Gene3D G3DSA:3.10.50.40 21 157 1.9E-53 T 12-10-2018 Vc3S01_A0752 679164f77f19de508a07a32cc609b78c 157 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 66 154 3.4E-27 T 12-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain Vc3S01_A0752 679164f77f19de508a07a32cc609b78c 157 SUPERFAMILY SSF54534 20 156 2.16E-51 T 12-10-2018 Vc3S01_A0035 a9e1f9057429344148e62b88fcb71ea2 189 Gene3D G3DSA:1.10.357.10 1 187 8.8E-44 T 12-10-2018 Vc3S01_A0035 a9e1f9057429344148e62b88fcb71ea2 189 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 57 5.3E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Vc3S01_A0035 a9e1f9057429344148e62b88fcb71ea2 189 SUPERFAMILY SSF48498 78 187 2.05E-16 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Vc3S01_A0035 a9e1f9057429344148e62b88fcb71ea2 189 SUPERFAMILY SSF46689 7 82 9.75E-15 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_A0458 12283493b978b1f4acfa1fea4fe8c16d 547 SMART SM00304 218 270 1.9E-11 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Vc3S01_A0458 12283493b978b1f4acfa1fea4fe8c16d 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 87 102 2.6E-24 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Vc3S01_A0458 12283493b978b1f4acfa1fea4fe8c16d 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 306 335 2.6E-24 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Vc3S01_A0458 12283493b978b1f4acfa1fea4fe8c16d 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 412 441 2.6E-24 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Vc3S01_A0458 12283493b978b1f4acfa1fea4fe8c16d 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 383 410 2.6E-24 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Vc3S01_A0458 12283493b978b1f4acfa1fea4fe8c16d 547 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 350 512 1.5E-40 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Vc3S01_A0458 12283493b978b1f4acfa1fea4fe8c16d 547 SUPERFAMILY SSF58104 239 547 9.94E-71 T 12-10-2018 Vc3S01_A0458 12283493b978b1f4acfa1fea4fe8c16d 547 SMART SM00283 285 546 3.4E-67 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Vc3S01_A0458 12283493b978b1f4acfa1fea4fe8c16d 547 Pfam PF00672 HAMP domain 219 266 6.0E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Vc3S01_A0458 12283493b978b1f4acfa1fea4fe8c16d 547 Gene3D G3DSA:1.10.287.950 217 547 5.4E-71 T 12-10-2018 Vc3S01_A1732 73ef103c3780ef62991feca4152b6505 413 SUPERFAMILY SSF54631 275 395 2.47E-12 T 12-10-2018 Vc3S01_A1732 73ef103c3780ef62991feca4152b6505 413 SMART SM00382 54 243 2.8E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_A1732 73ef103c3780ef62991feca4152b6505 413 Gene3D G3DSA:3.10.580.10 273 395 4.0E-8 T 12-10-2018 Vc3S01_A1732 73ef103c3780ef62991feca4152b6505 413 Gene3D G3DSA:3.40.50.300 32 270 2.1E-69 T 12-10-2018 Vc3S01_A1732 73ef103c3780ef62991feca4152b6505 413 SUPERFAMILY SSF52540 39 265 1.89E-74 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A1732 73ef103c3780ef62991feca4152b6505 413 Pfam PF00005 ABC transporter 45 193 4.2E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_A1732 73ef103c3780ef62991feca4152b6505 413 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 38 395 3.7E-125 T 12-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 Vc3S01_A1732 73ef103c3780ef62991feca4152b6505 413 ProSitePatterns PS00211 ABC transporters family signature. 166 180 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_2170 9ca947e7580ed35051773237455bcbd1 286 SUPERFAMILY SSF46689 180 226 3.14E-5 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_2170 9ca947e7580ed35051773237455bcbd1 286 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 230 272 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Vc3S01_2170 9ca947e7580ed35051773237455bcbd1 286 Pfam PF12833 Helix-turn-helix domain 199 276 3.2E-25 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_2170 9ca947e7580ed35051773237455bcbd1 286 SMART SM00342 193 276 1.5E-30 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_2170 9ca947e7580ed35051773237455bcbd1 286 SUPERFAMILY SSF46689 229 277 6.27E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_2170 9ca947e7580ed35051773237455bcbd1 286 Gene3D G3DSA:1.10.10.60 172 284 2.1E-29 T 12-10-2018 Vc3S01_2170 9ca947e7580ed35051773237455bcbd1 286 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 260 276 7.9E-8 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Vc3S01_2170 9ca947e7580ed35051773237455bcbd1 286 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 245 260 7.9E-8 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Vc3S01_0254 7deb54938d3e2ea083d98f4299ed324b 401 SUPERFAMILY SSF117892 126 254 8.63E-22 T 12-10-2018 IPR036013 Band 7/SPFH domain superfamily Vc3S01_0254 7deb54938d3e2ea083d98f4299ed324b 401 TIGRFAM TIGR01933 hflK: HflK protein 91 351 8.2E-122 T 12-10-2018 IPR010201 HflK GO:0016021 Vc3S01_0254 7deb54938d3e2ea083d98f4299ed324b 401 Pfam PF12221 Bacterial membrane protein N terminal 1 58 5.0E-14 T 12-10-2018 IPR020980 Menbrane protein HflK, N-terminal Vc3S01_0254 7deb54938d3e2ea083d98f4299ed324b 401 Gene3D G3DSA:3.30.479.30 119 251 1.9E-22 T 12-10-2018 Vc3S01_0254 7deb54938d3e2ea083d98f4299ed324b 401 Pfam PF01145 SPFH domain / Band 7 family 93 264 5.0E-29 T 12-10-2018 IPR001107 Band 7 domain Vc3S01_0254 7deb54938d3e2ea083d98f4299ed324b 401 SMART SM00244 89 249 9.6E-52 T 12-10-2018 IPR001107 Band 7 domain Vc3S01_0254 7deb54938d3e2ea083d98f4299ed324b 401 PRINTS PR00721 Stomatin signature 143 164 2.0E-6 T 12-10-2018 IPR001972 Stomatin family GO:0016020 Vc3S01_0254 7deb54938d3e2ea083d98f4299ed324b 401 PRINTS PR00721 Stomatin signature 96 118 2.0E-6 T 12-10-2018 IPR001972 Stomatin family GO:0016020 Vc3S01_0254 7deb54938d3e2ea083d98f4299ed324b 401 PRINTS PR00721 Stomatin signature 199 222 2.0E-6 T 12-10-2018 IPR001972 Stomatin family GO:0016020 Vc3S01_2417 1b14b35037ca723be7e2bd333961bbc7 529 SUPERFAMILY SSF51735 387 518 7.49E-15 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_2417 1b14b35037ca723be7e2bd333961bbc7 529 Gene3D G3DSA:3.40.50.720 379 529 1.4E-32 T 12-10-2018 Vc3S01_2417 1b14b35037ca723be7e2bd333961bbc7 529 Gene3D G3DSA:1.20.1530.20 2 361 9.1E-48 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily Vc3S01_2417 1b14b35037ca723be7e2bd333961bbc7 529 Pfam PF00999 Sodium/hydrogen exchanger family 3 349 2.3E-39 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 Vc3S01_2417 1b14b35037ca723be7e2bd333961bbc7 529 Pfam PF02254 TrkA-N domain 388 504 1.8E-18 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Vc3S01_1339 77e790b17a1a5ebe21055c10910976ee 218 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 174 192 4.4E-24 T 12-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Vc3S01_1339 77e790b17a1a5ebe21055c10910976ee 218 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 197 217 4.4E-24 T 12-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Vc3S01_1339 77e790b17a1a5ebe21055c10910976ee 218 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 155 172 4.4E-24 T 12-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Vc3S01_1339 77e790b17a1a5ebe21055c10910976ee 218 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 19 33 4.4E-24 T 12-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Vc3S01_1339 77e790b17a1a5ebe21055c10910976ee 218 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 66 86 4.4E-24 T 12-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Vc3S01_1339 77e790b17a1a5ebe21055c10910976ee 218 Gene3D G3DSA:3.40.50.150 1 217 2.0E-53 T 12-10-2018 Vc3S01_1339 77e790b17a1a5ebe21055c10910976ee 218 SUPERFAMILY SSF53335 3 217 8.99E-50 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Vc3S01_1339 77e790b17a1a5ebe21055c10910976ee 218 Pfam PF01555 DNA methylase 153 210 2.5E-20 T 12-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 Vc3S01_1339 77e790b17a1a5ebe21055c10910976ee 218 Pfam PF01555 DNA methylase 20 137 2.6E-17 T 12-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 Vc3S01_1339 77e790b17a1a5ebe21055c10910976ee 218 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 23 29 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Vc3S01_A0786 655dab659367c37097a292c7e7fe2401 80 Pfam PF14375 Cysteine-rich CWC 31 75 2.8E-7 T 12-10-2018 IPR032720 Cysteine-rich CWC Vc3S01_A0658 af8874ce0c1fea72d74ea3d2d670ccaf 258 Pfam PF00717 Peptidase S24-like 172 237 1.6E-11 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C Vc3S01_A0658 af8874ce0c1fea72d74ea3d2d670ccaf 258 SUPERFAMILY SSF46955 33 99 2.84E-10 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily Vc3S01_A0658 af8874ce0c1fea72d74ea3d2d670ccaf 258 SUPERFAMILY SSF51306 122 253 4.97E-26 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Vc3S01_A0658 af8874ce0c1fea72d74ea3d2d670ccaf 258 Gene3D G3DSA:2.10.109.10 130 256 4.0E-14 T 12-10-2018 Vc3S01_A0658 af8874ce0c1fea72d74ea3d2d670ccaf 258 Gene3D G3DSA:1.10.10.10 32 102 1.6E-10 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_2738 8a97c4bcc305d8b0c075bae52f5b4660 183 Pfam PF01814 Hemerythrin HHE cation binding domain 2 135 2.6E-13 T 12-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 Vc3S01_2738 8a97c4bcc305d8b0c075bae52f5b4660 183 Gene3D G3DSA:1.20.120.520 1 155 1.2E-15 T 12-10-2018 Vc3S01_A0131 75f6b91cc465821d4c7f894c01b4941a 307 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 18 229 2.3E-4 T 12-10-2018 IPR008775 Phytanoyl-CoA dioxygenase Vc3S01_A0131 75f6b91cc465821d4c7f894c01b4941a 307 Gene3D G3DSA:2.60.120.620 6 290 2.6E-80 T 12-10-2018 Vc3S01_A0131 75f6b91cc465821d4c7f894c01b4941a 307 SUPERFAMILY SSF51197 7 262 3.39E-27 T 12-10-2018 Vc3S01_p30125 b11dd871d8eecc692c798e925ef5ce91 403 SUPERFAMILY SSF52540 108 370 1.34E-23 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_p30125 b11dd871d8eecc692c798e925ef5ce91 403 Pfam PF13614 AAA domain 110 287 4.9E-22 T 12-10-2018 IPR025669 AAA domain Vc3S01_p30125 b11dd871d8eecc692c798e925ef5ce91 403 Gene3D G3DSA:3.40.50.300 107 402 1.9E-49 T 12-10-2018 Vc3S01_A1871 2fab792c7c8cd40aa4e136ebd9c5aff8 358 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 40 327 31.221 T 12-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 Vc3S01_A1871 2fab792c7c8cd40aa4e136ebd9c5aff8 358 Gene3D G3DSA:3.40.50.300 92 263 8.7E-43 T 12-10-2018 Vc3S01_A1871 2fab792c7c8cd40aa4e136ebd9c5aff8 358 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 74 320 6.1E-48 T 12-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 Vc3S01_A1871 2fab792c7c8cd40aa4e136ebd9c5aff8 358 Pfam PF03193 RsgA GTPase 90 263 3.2E-48 T 12-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 Vc3S01_A1871 2fab792c7c8cd40aa4e136ebd9c5aff8 358 SUPERFAMILY SSF52540 108 324 1.29E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A1871 2fab792c7c8cd40aa4e136ebd9c5aff8 358 Gene3D G3DSA:1.10.40.50 265 337 6.6E-22 T 12-10-2018 Vc3S01_0960 a6ae016703b5be55f9de7649d766d55e 229 Pfam PF00106 short chain dehydrogenase 3 190 9.9E-32 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_0960 a6ae016703b5be55f9de7649d766d55e 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 3.8E-16 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_0960 a6ae016703b5be55f9de7649d766d55e 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 3.8E-16 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_0960 a6ae016703b5be55f9de7649d766d55e 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 3.8E-16 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_0960 a6ae016703b5be55f9de7649d766d55e 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.8E-16 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_0960 a6ae016703b5be55f9de7649d766d55e 229 SUPERFAMILY SSF51735 3 229 4.63E-78 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_0960 a6ae016703b5be55f9de7649d766d55e 229 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 4.2E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_0960 a6ae016703b5be55f9de7649d766d55e 229 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 4.2E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_0960 a6ae016703b5be55f9de7649d766d55e 229 Gene3D G3DSA:3.40.50.720 1 229 1.8E-64 T 12-10-2018 Vc3S01_1744 043b25fdd2d02342c5fd81d1480c7342 367 Gene3D G3DSA:2.40.160.10 65 365 1.4E-11 T 12-10-2018 IPR023614 Porin domain superfamily Vc3S01_1744 043b25fdd2d02342c5fd81d1480c7342 367 Pfam PF13609 Gram-negative porin 12 364 2.3E-10 T 12-10-2018 Vc3S01_1744 043b25fdd2d02342c5fd81d1480c7342 367 SUPERFAMILY SSF56935 30 367 1.4E-26 T 12-10-2018 Vc3S01_3160 82f7f7b61cf61c8e20b8363e4bc0251f 296 SUPERFAMILY SSF53850 87 291 9.99E-30 T 12-10-2018 Vc3S01_3160 82f7f7b61cf61c8e20b8363e4bc0251f 296 Pfam PF03466 LysR substrate binding domain 87 289 3.8E-33 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_3160 82f7f7b61cf61c8e20b8363e4bc0251f 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 1.1E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_3160 82f7f7b61cf61c8e20b8363e4bc0251f 296 SUPERFAMILY SSF46785 1 87 1.26E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_3160 82f7f7b61cf61c8e20b8363e4bc0251f 296 Gene3D G3DSA:1.10.10.10 1 90 2.6E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_3160 82f7f7b61cf61c8e20b8363e4bc0251f 296 Gene3D G3DSA:3.40.190.10 91 287 7.3E-27 T 12-10-2018 Vc3S01_3160 82f7f7b61cf61c8e20b8363e4bc0251f 296 Gene3D G3DSA:3.40.190.10 165 265 7.3E-27 T 12-10-2018 Vc3S01_2230 bf5bddbefe1c34a643313a322e6b6c49 236 Gene3D G3DSA:2.30.210.20 5 62 1.9E-23 T 12-10-2018 Vc3S01_2230 bf5bddbefe1c34a643313a322e6b6c49 236 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 37 216 1.1E-74 T 12-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 Vc3S01_2230 bf5bddbefe1c34a643313a322e6b6c49 236 Gene3D G3DSA:3.40.630.70 63 235 5.2E-62 T 12-10-2018 Vc3S01_2230 bf5bddbefe1c34a643313a322e6b6c49 236 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 236 89.819 T 12-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 Vc3S01_2230 bf5bddbefe1c34a643313a322e6b6c49 236 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 36 204 2.4E-69 T 12-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 Vc3S01_2230 bf5bddbefe1c34a643313a322e6b6c49 236 SUPERFAMILY SSF55729 5 229 4.82E-87 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_1100 35e68210e47fd875c377a546ff1754f9 320 Gene3D G3DSA:3.40.50.300 3 167 9.1E-50 T 12-10-2018 Vc3S01_1100 35e68210e47fd875c377a546ff1754f9 320 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 12 197 3.7E-63 T 12-10-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Vc3S01_1100 35e68210e47fd875c377a546ff1754f9 320 SUPERFAMILY SSF48019 208 319 2.21E-14 T 12-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 Vc3S01_1100 35e68210e47fd875c377a546ff1754f9 320 Pfam PF13177 DNA polymerase III, delta subunit 12 164 2.2E-44 T 12-10-2018 Vc3S01_1100 35e68210e47fd875c377a546ff1754f9 320 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 207 314 1.2E-21 T 12-10-2018 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Vc3S01_1100 35e68210e47fd875c377a546ff1754f9 320 SUPERFAMILY SSF52540 2 180 5.83E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2501 ccbe04ff61b840ebf5a7c1a45e030508 269 SUPERFAMILY SSF48452 191 255 2.39E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_2501 ccbe04ff61b840ebf5a7c1a45e030508 269 Pfam PF13369 Transglutaminase-like superfamily 34 184 5.7E-43 T 12-10-2018 IPR032698 Protein SirB1, N-terminal Reactome: R-HSA-8951664|Reactome: R-HSA-983168 Vc3S01_2501 ccbe04ff61b840ebf5a7c1a45e030508 269 Pfam PF13371 Tetratricopeptide repeat 187 259 3.4E-23 T 12-10-2018 Vc3S01_A0974 06ec981e173dcab7c60113c5b14dde91 228 SMART SM00862 22 96 0.0079 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Vc3S01_A0974 06ec981e173dcab7c60113c5b14dde91 228 SUPERFAMILY SSF46894 3 98 2.41E-13 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Vc3S01_A0974 06ec981e173dcab7c60113c5b14dde91 228 Gene3D G3DSA:1.10.10.10 1 106 2.1E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A0974 06ec981e173dcab7c60113c5b14dde91 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 28 96 3.7E-8 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Vc3S01_1150 e5834a2c31934625f52ddbec5e2b2fbf 423 Gene3D G3DSA:1.20.1600.10 26 423 3.1E-78 T 12-10-2018 Vc3S01_1150 e5834a2c31934625f52ddbec5e2b2fbf 423 SUPERFAMILY SSF56954 4 412 1.31E-77 T 12-10-2018 Vc3S01_1150 e5834a2c31934625f52ddbec5e2b2fbf 423 Pfam PF02321 Outer membrane efflux protein 229 407 1.3E-27 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Vc3S01_1150 e5834a2c31934625f52ddbec5e2b2fbf 423 Pfam PF02321 Outer membrane efflux protein 28 204 2.7E-25 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Vc3S01_0695 94c83a01d1c7c9b168225b062950ba87 350 PIRSF PIRSF000808 2 345 8.3E-125 T 12-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 Vc3S01_0695 94c83a01d1c7c9b168225b062950ba87 350 SUPERFAMILY SSF54197 181 349 4.08E-55 T 12-10-2018 IPR036265 HIT-like superfamily Vc3S01_0695 94c83a01d1c7c9b168225b062950ba87 350 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 4 349 3.3E-186 T 12-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 Vc3S01_0695 94c83a01d1c7c9b168225b062950ba87 350 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 6 178 5.5E-67 T 12-10-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 Vc3S01_0695 94c83a01d1c7c9b168225b062950ba87 350 Gene3D G3DSA:3.30.428.10 178 350 1.5E-73 T 12-10-2018 IPR036265 HIT-like superfamily Vc3S01_0695 94c83a01d1c7c9b168225b062950ba87 350 Gene3D G3DSA:3.30.428.10 46 177 3.1E-55 T 12-10-2018 IPR036265 HIT-like superfamily Vc3S01_0695 94c83a01d1c7c9b168225b062950ba87 350 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 186 349 2.3E-66 T 12-10-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 Vc3S01_0695 94c83a01d1c7c9b168225b062950ba87 350 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 153 170 - T 12-10-2018 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 Vc3S01_0695 94c83a01d1c7c9b168225b062950ba87 350 SUPERFAMILY SSF54197 6 179 1.7E-73 T 12-10-2018 IPR036265 HIT-like superfamily Vc3S01_A1329 09624775ba7cffee73e7778bb9d6d068 215 Gene3D G3DSA:2.40.160.20 17 215 2.5E-21 T 12-10-2018 Vc3S01_A1329 09624775ba7cffee73e7778bb9d6d068 215 SUPERFAMILY SSF56925 19 215 5.76E-24 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel Vc3S01_A1329 09624775ba7cffee73e7778bb9d6d068 215 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 148 215 1.7E-4 T 12-10-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 Vc3S01_A1329 09624775ba7cffee73e7778bb9d6d068 215 Pfam PF13505 Outer membrane protein beta-barrel domain 6 215 3.0E-17 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel Vc3S01_A1284 a732d1a11edba35e14ca0666ec84e64c 263 Gene3D G3DSA:1.25.40.590 44 201 1.9E-47 T 12-10-2018 IPR038522 Type IV / VI secretion system, DotU superfamily Vc3S01_A1284 a732d1a11edba35e14ca0666ec84e64c 263 Pfam PF09850 Type VI secretion system protein DotU 47 246 2.3E-50 T 12-10-2018 IPR017732 Type IV / VI secretion system, DotU Vc3S01_A1284 a732d1a11edba35e14ca0666ec84e64c 263 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 46 253 2.2E-61 T 12-10-2018 IPR017732 Type IV / VI secretion system, DotU Vc3S01_A1687 3e216002beb84125a2d9e13709de6238 533 Pfam PF00501 AMP-binding enzyme 26 434 1.2E-89 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Vc3S01_A1687 3e216002beb84125a2d9e13709de6238 533 SUPERFAMILY SSF56801 8 531 1.44E-125 T 12-10-2018 Vc3S01_A1687 3e216002beb84125a2d9e13709de6238 533 Pfam PF13193 AMP-binding enzyme C-terminal domain 442 522 2.6E-14 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Vc3S01_A1687 3e216002beb84125a2d9e13709de6238 533 Gene3D G3DSA:3.40.50.12780 2 428 3.1E-102 T 12-10-2018 Vc3S01_A1687 3e216002beb84125a2d9e13709de6238 533 Gene3D G3DSA:3.30.300.310 429 532 1.4E-27 T 12-10-2018 Vc3S01_2953 cd9c9c91f11e5f964bd8f63144feb77c 335 PIRSF PIRSF004532 1 331 2.9E-134 T 12-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 Vc3S01_2953 cd9c9c91f11e5f964bd8f63144feb77c 335 Gene3D G3DSA:3.30.540.10 7 319 3.5E-125 T 12-10-2018 Vc3S01_2953 cd9c9c91f11e5f964bd8f63144feb77c 335 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 329 4.6E-166 T 12-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 Vc3S01_2953 cd9c9c91f11e5f964bd8f63144feb77c 335 Gene3D G3DSA:3.40.190.90 109 276 3.5E-125 T 12-10-2018 Vc3S01_2953 cd9c9c91f11e5f964bd8f63144feb77c 335 SUPERFAMILY SSF56655 1 324 3.6E-107 T 12-10-2018 Vc3S01_2953 cd9c9c91f11e5f964bd8f63144feb77c 335 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 321 2.2E-128 T 12-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 Vc3S01_2967 730f0d2bdcf56c285d1496a8134658e5 365 Pfam PF04230 Polysaccharide pyruvyl transferase 13 302 7.8E-28 T 12-10-2018 IPR007345 Polysaccharide pyruvyl transferase Vc3S01_1651 31a14dc00388e29303dd9ff1a69b2fd5 395 SMART SM01204 225 372 3.0E-32 T 12-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 Vc3S01_1651 31a14dc00388e29303dd9ff1a69b2fd5 395 Pfam PF10442 FIST C domain 225 371 5.3E-20 T 12-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 Vc3S01_1651 31a14dc00388e29303dd9ff1a69b2fd5 395 SMART SM00897 27 224 5.7E-37 T 12-10-2018 IPR013702 FIST domain, N-terminal Vc3S01_1651 31a14dc00388e29303dd9ff1a69b2fd5 395 Pfam PF08495 FIST N domain 32 223 1.5E-23 T 12-10-2018 IPR013702 FIST domain, N-terminal Vc3S01_1443 23c504f0c6fe72512eb9f9f01a5168c0 429 Gene3D G3DSA:1.50.10.140 23 396 4.2E-26 T 12-10-2018 Vc3S01_1443 23c504f0c6fe72512eb9f9f01a5168c0 429 Pfam PF10091 Putative glucoamylase 305 392 6.4E-5 T 12-10-2018 IPR019282 Domain of unknown function DUF2329 Vc3S01_2669 85bee1f5c30088e39e23711ff0ef6ca2 321 Gene3D G3DSA:3.40.190.10 123 265 1.7E-96 T 12-10-2018 Vc3S01_2669 85bee1f5c30088e39e23711ff0ef6ca2 321 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 10 307 1.6E-75 T 12-10-2018 IPR011862 Phosphate binding protein GO:0042301 Vc3S01_2669 85bee1f5c30088e39e23711ff0ef6ca2 321 SUPERFAMILY SSF53850 36 318 3.08E-65 T 12-10-2018 Vc3S01_2669 85bee1f5c30088e39e23711ff0ef6ca2 321 Pfam PF12849 PBP superfamily domain 37 293 2.0E-27 T 12-10-2018 IPR024370 PBP domain Vc3S01_2669 85bee1f5c30088e39e23711ff0ef6ca2 321 Gene3D G3DSA:3.40.190.10 38 309 1.7E-96 T 12-10-2018 Vc3S01_A0567 634ce32aaa7e38f4a2e030a90c6fa743 178 SUPERFAMILY SSF89028 8 169 1.33E-36 T 12-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 Vc3S01_A0567 634ce32aaa7e38f4a2e030a90c6fa743 178 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 28 149 4.0E-60 T 12-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 Vc3S01_A0567 634ce32aaa7e38f4a2e030a90c6fa743 178 Gene3D G3DSA:1.20.1200.10 17 173 1.5E-23 T 12-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 Vc3S01_A0567 634ce32aaa7e38f4a2e030a90c6fa743 178 Pfam PF01923 Cobalamin adenosyltransferase 19 156 1.6E-15 T 12-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 Vc3S01_2128 48f6c943ac5f6e5b921a79c9e9e85786 106 Pfam PF11695 Domain of unknown function (DUF3291) 3 106 3.7E-39 T 12-10-2018 IPR021708 Domain of unknown function DUF3291 Vc3S01_2128 48f6c943ac5f6e5b921a79c9e9e85786 106 SUPERFAMILY SSF54909 9 106 2.5E-13 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel Vc3S01_2118 ebe474924c45405f7f5fc0e3f6f57484 253 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_2118 ebe474924c45405f7f5fc0e3f6f57484 253 Pfam PF00005 ABC transporter 23 178 2.2E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_2118 ebe474924c45405f7f5fc0e3f6f57484 253 Gene3D G3DSA:3.40.50.300 4 253 3.4E-62 T 12-10-2018 Vc3S01_2118 ebe474924c45405f7f5fc0e3f6f57484 253 SUPERFAMILY SSF52540 3 249 4.41E-51 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2118 ebe474924c45405f7f5fc0e3f6f57484 253 SMART SM00382 31 225 8.7E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_2190 2c25721fde29d943f474fd0913fc690f 211 TIGRFAM TIGR02796 tolQ: protein TolQ 1 199 4.9E-85 T 12-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 Vc3S01_2190 2c25721fde29d943f474fd0913fc690f 211 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 1 204 38.054 T 12-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 Vc3S01_2190 2c25721fde29d943f474fd0913fc690f 211 Pfam PF01618 MotA/TolQ/ExbB proton channel family 59 186 9.8E-43 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Vc3S01_A1470 fb21ec34e07973b5e5174ae1c5159f3b 333 Pfam PF04198 Putative sugar-binding domain 66 320 1.1E-76 T 12-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 Vc3S01_A1470 fb21ec34e07973b5e5174ae1c5159f3b 333 Gene3D G3DSA:1.10.10.60 9 59 1.1E-18 T 12-10-2018 Vc3S01_A1470 fb21ec34e07973b5e5174ae1c5159f3b 333 Gene3D G3DSA:3.40.50.1360 60 325 4.3E-79 T 12-10-2018 Vc3S01_A1470 fb21ec34e07973b5e5174ae1c5159f3b 333 SUPERFAMILY SSF100950 70 320 2.93E-63 T 12-10-2018 IPR037171 NagB/RpiA transferase-like Vc3S01_0682 95caffa3523166b489dc150b4431beed 337 Gene3D G3DSA:1.25.40.10 179 336 9.0E-27 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_0682 95caffa3523166b489dc150b4431beed 337 Gene3D G3DSA:1.25.40.10 41 173 3.7E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_0682 95caffa3523166b489dc150b4431beed 337 SUPERFAMILY SSF48452 45 315 1.06E-28 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_0682 95caffa3523166b489dc150b4431beed 337 SMART SM00028 277 310 2.7E-4 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_0682 95caffa3523166b489dc150b4431beed 337 SMART SM00028 84 117 19.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_0682 95caffa3523166b489dc150b4431beed 337 SMART SM00028 118 151 55.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_0682 95caffa3523166b489dc150b4431beed 337 SMART SM00028 179 212 0.028 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_0682 95caffa3523166b489dc150b4431beed 337 SMART SM00028 213 246 0.047 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_0682 95caffa3523166b489dc150b4431beed 337 Pfam PF13181 Tetratricopeptide repeat 278 308 0.011 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_0682 95caffa3523166b489dc150b4431beed 337 Pfam PF13181 Tetratricopeptide repeat 181 210 0.0032 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_1611 0bf2c0314f09bdf0f70025ccea186f6e 45 Pfam PF00708 Acylphosphatase 2 44 6.5E-5 T 12-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 Vc3S01_1611 0bf2c0314f09bdf0f70025ccea186f6e 45 Gene3D G3DSA:3.30.70.100 1 45 2.0E-7 T 12-10-2018 Vc3S01_1611 0bf2c0314f09bdf0f70025ccea186f6e 45 SUPERFAMILY SSF54975 1 44 2.05E-7 T 12-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 Vc3S01_1253 3da83904239dbb4e6e01bb7380a8e67d 158 Pfam PF01047 MarR family 31 89 2.0E-16 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Vc3S01_1253 3da83904239dbb4e6e01bb7380a8e67d 158 Gene3D G3DSA:1.10.10.10 1 140 4.9E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_1253 3da83904239dbb4e6e01bb7380a8e67d 158 SUPERFAMILY SSF46785 4 141 3.08E-31 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_1253 3da83904239dbb4e6e01bb7380a8e67d 158 SMART SM00347 24 124 6.4E-19 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Vc3S01_A0124 2f307deaa099b74dbb8338bca2da7454 279 SUPERFAMILY SSF53474 4 277 2.81E-91 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_A0124 2f307deaa099b74dbb8338bca2da7454 279 Pfam PF00756 Putative esterase 23 271 2.1E-62 T 12-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 Vc3S01_A0124 2f307deaa099b74dbb8338bca2da7454 279 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 5 277 9.3E-124 T 12-10-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 Vc3S01_A0124 2f307deaa099b74dbb8338bca2da7454 279 Gene3D G3DSA:3.40.50.1820 3 278 6.8E-97 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_3181 ff628c6844b474588b80954815fce55d 268 Pfam PF07070 SpoOM protein 4 219 3.4E-77 T 12-10-2018 IPR009776 Sporulation stage 0, protein M Vc3S01_A2033 e5f2256be7b521d5a532c01c4f24e805 211 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 181 194 - T 12-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Vc3S01_A2033 e5f2256be7b521d5a532c01c4f24e805 211 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 9 211 37.398 T 12-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Vc3S01_A2033 e5f2256be7b521d5a532c01c4f24e805 211 PIRSF PIRSF000190 1 211 2.3E-80 T 12-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Vc3S01_A2033 e5f2256be7b521d5a532c01c4f24e805 211 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 1 211 9.1E-88 T 12-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Vc3S01_A2033 e5f2256be7b521d5a532c01c4f24e805 211 Gene3D G3DSA:2.30.110.10 13 211 1.4E-74 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Vc3S01_A2033 e5f2256be7b521d5a532c01c4f24e805 211 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 33 116 1.6E-21 T 12-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Vc3S01_A2033 e5f2256be7b521d5a532c01c4f24e805 211 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 171 211 3.6E-19 T 12-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Vc3S01_A2033 e5f2256be7b521d5a532c01c4f24e805 211 SUPERFAMILY SSF50475 11 211 3.93E-63 T 12-10-2018 Vc3S01_A0466 5889f26004e2614482bc0e73824e72b2 334 SUPERFAMILY SSF53300 94 293 4.01E-39 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Vc3S01_A0466 5889f26004e2614482bc0e73824e72b2 334 Gene3D G3DSA:3.40.50.410 96 297 8.3E-61 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Vc3S01_A0466 5889f26004e2614482bc0e73824e72b2 334 Pfam PF00092 von Willebrand factor type A domain 98 290 3.2E-32 T 12-10-2018 IPR002035 von Willebrand factor, type A Vc3S01_A0466 5889f26004e2614482bc0e73824e72b2 334 SMART SM00327 96 297 1.8E-20 T 12-10-2018 IPR002035 von Willebrand factor, type A Vc3S01_A1250 fc40fdb9623959e04d5be3e4007cadcb 129 Gene3D G3DSA:2.40.160.60 1 129 8.5E-34 T 12-10-2018 Vc3S01_A1250 fc40fdb9623959e04d5be3e4007cadcb 129 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 2 129 1.5E-31 T 12-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) Vc3S01_A1250 fc40fdb9623959e04d5be3e4007cadcb 129 SUPERFAMILY SSF56935 15 129 3.53E-23 T 12-10-2018 Vc3S01_2650 d5995e1e8c71891f484784f7f2dfd56f 389 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 62 67 - T 12-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 Vc3S01_2650 d5995e1e8c71891f484784f7f2dfd56f 389 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 264 275 - T 12-10-2018 IPR033116 Serine proteases, trypsin family, serine active site Vc3S01_2650 d5995e1e8c71891f484784f7f2dfd56f 389 Pfam PF00089 Trypsin 45 315 5.4E-26 T 12-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 Vc3S01_2650 d5995e1e8c71891f484784f7f2dfd56f 389 SUPERFAMILY SSF50494 48 319 3.49E-38 T 12-10-2018 IPR009003 Peptidase S1, PA clan Vc3S01_2650 d5995e1e8c71891f484784f7f2dfd56f 389 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 52 67 3.3E-15 T 12-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 Vc3S01_2650 d5995e1e8c71891f484784f7f2dfd56f 389 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 136 150 3.3E-15 T 12-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 Vc3S01_2650 d5995e1e8c71891f484784f7f2dfd56f 389 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 263 275 3.3E-15 T 12-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 Vc3S01_2650 d5995e1e8c71891f484784f7f2dfd56f 389 SMART SM00020 25 315 2.9E-20 T 12-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 Vc3S01_2650 d5995e1e8c71891f484784f7f2dfd56f 389 Gene3D G3DSA:2.40.10.10 159 318 3.1E-22 T 12-10-2018 Vc3S01_2650 d5995e1e8c71891f484784f7f2dfd56f 389 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 367 388 5.9E-4 T 12-10-2018 IPR020008 GlyGly-CTERM domain Vc3S01_2650 d5995e1e8c71891f484784f7f2dfd56f 389 Gene3D G3DSA:2.40.10.10 45 158 1.2E-16 T 12-10-2018 Vc3S01_A1075 3034083ff9d98dc3bd990b42b8beabf0 416 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 14 415 1.6E-132 T 12-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) Vc3S01_A1075 3034083ff9d98dc3bd990b42b8beabf0 416 Gene3D G3DSA:2.40.160.60 22 416 1.0E-127 T 12-10-2018 Vc3S01_A1075 3034083ff9d98dc3bd990b42b8beabf0 416 SUPERFAMILY SSF56935 22 415 3.48E-94 T 12-10-2018 Vc3S01_2441 31cf71c990a796e0348b6e0217e235dc 877 Gene3D G3DSA:3.90.550.10 270 491 5.9E-79 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Vc3S01_2441 31cf71c990a796e0348b6e0217e235dc 877 PRINTS PR01439 Cellulose synthase subunit A signature 532 558 1.1E-56 T 12-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Vc3S01_2441 31cf71c990a796e0348b6e0217e235dc 877 PRINTS PR01439 Cellulose synthase subunit A signature 371 395 1.1E-56 T 12-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Vc3S01_2441 31cf71c990a796e0348b6e0217e235dc 877 PRINTS PR01439 Cellulose synthase subunit A signature 675 696 1.1E-56 T 12-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Vc3S01_2441 31cf71c990a796e0348b6e0217e235dc 877 PRINTS PR01439 Cellulose synthase subunit A signature 561 580 1.1E-56 T 12-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Vc3S01_2441 31cf71c990a796e0348b6e0217e235dc 877 PRINTS PR01439 Cellulose synthase subunit A signature 601 620 1.1E-56 T 12-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Vc3S01_2441 31cf71c990a796e0348b6e0217e235dc 877 PRINTS PR01439 Cellulose synthase subunit A signature 207 227 1.1E-56 T 12-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Vc3S01_2441 31cf71c990a796e0348b6e0217e235dc 877 PRINTS PR01439 Cellulose synthase subunit A signature 290 309 1.1E-56 T 12-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Vc3S01_2441 31cf71c990a796e0348b6e0217e235dc 877 PRINTS PR01439 Cellulose synthase subunit A signature 235 260 1.1E-56 T 12-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Vc3S01_2441 31cf71c990a796e0348b6e0217e235dc 877 Pfam PF07238 PilZ domain 702 802 4.2E-11 T 12-10-2018 IPR009875 PilZ domain GO:0035438 Vc3S01_2441 31cf71c990a796e0348b6e0217e235dc 877 SUPERFAMILY SSF53448 280 559 8.7E-52 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Vc3S01_2441 31cf71c990a796e0348b6e0217e235dc 877 Pfam PF00535 Glycosyl transferase family 2 286 455 2.1E-34 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Vc3S01_2441 31cf71c990a796e0348b6e0217e235dc 877 TIGRFAM TIGR03030 CelA: cellulose synthase catalytic subunit (UDP-forming) 158 841 2.5E-286 T 12-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Vc3S01_2441 31cf71c990a796e0348b6e0217e235dc 877 Gene3D G3DSA:2.40.10.220 698 811 1.2E-9 T 12-10-2018 Vc3S01_2441 31cf71c990a796e0348b6e0217e235dc 877 SUPERFAMILY SSF141371 704 793 8.63E-7 T 12-10-2018 Vc3S01_p20178 ecdab4ac313b1cd90a22684392374905 241 Pfam PF01026 TatD related DNase 2 238 2.6E-33 T 12-10-2018 IPR001130 TatD family GO:0016788 Vc3S01_p20178 ecdab4ac313b1cd90a22684392374905 241 Gene3D G3DSA:3.20.20.140 1 241 6.1E-64 T 12-10-2018 Vc3S01_p20178 ecdab4ac313b1cd90a22684392374905 241 PIRSF PIRSF005902 1 241 3.7E-35 T 12-10-2018 IPR001130 TatD family GO:0016788 Vc3S01_p20178 ecdab4ac313b1cd90a22684392374905 241 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 179 195 - T 12-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 Vc3S01_p20178 ecdab4ac313b1cd90a22684392374905 241 SUPERFAMILY SSF51556 2 238 8.93E-43 T 12-10-2018 IPR032466 Metal-dependent hydrolase Vc3S01_2265 8cb5904cd065358f363bffee09abe4af 414 Pfam PF02687 FtsX-like permease family 301 407 3.7E-12 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Vc3S01_2265 8cb5904cd065358f363bffee09abe4af 414 Pfam PF12704 MacB-like periplasmic core domain 30 222 1.9E-13 T 12-10-2018 IPR025857 MacB-like periplasmic core domain Vc3S01_2265 8cb5904cd065358f363bffee09abe4af 414 TIGRFAM TIGR02213 lolE_release: lipoprotein releasing system, transmembrane protein LolE 4 414 1.2E-214 T 12-10-2018 IPR011926 Lipoprotein-releasing system transmembrane protein LolC/E, gammaproteobacteria type GO:0016021|GO:0042953|GO:0042954|GO:0044874 Vc3S01_2265 8cb5904cd065358f363bffee09abe4af 414 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 413 2.3E-158 T 12-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 Vc3S01_A0248 68abeac81449c869c0d3333ccc7bf24f 707 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 24 696 3.4E-209 T 12-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ Vc3S01_A0248 68abeac81449c869c0d3333ccc7bf24f 707 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 122 615 3.0E-72 T 12-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Vc3S01_A0156 de93d1e14c657cd4b98a045a13e7e2d9 153 Pfam PF03974 Ecotin 31 150 2.0E-38 T 12-10-2018 IPR005658 Proteinase inhibitor I11, ecotin Vc3S01_A0156 de93d1e14c657cd4b98a045a13e7e2d9 153 Gene3D G3DSA:2.60.40.550 17 153 1.6E-44 T 12-10-2018 Vc3S01_A0156 de93d1e14c657cd4b98a045a13e7e2d9 153 PIRSF PIRSF006865 1 153 1.5E-44 T 12-10-2018 IPR005658 Proteinase inhibitor I11, ecotin Vc3S01_A0156 de93d1e14c657cd4b98a045a13e7e2d9 153 SUPERFAMILY SSF49772 30 153 5.89E-41 T 12-10-2018 IPR036198 Ecotin superfamily Vc3S01_A0086 2d6c505ac924050068d1f6be6ced6923 284 Gene3D G3DSA:3.40.50.1820 64 281 1.9E-27 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_A0086 2d6c505ac924050068d1f6be6ced6923 284 Pfam PF12146 Serine aminopeptidase, S33 83 183 3.4E-11 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 Vc3S01_A0086 2d6c505ac924050068d1f6be6ced6923 284 SUPERFAMILY SSF53474 40 269 6.72E-28 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_0315 d9802615c513d984ff36a5b5e635ebbb 827 Gene3D G3DSA:3.40.710.10 215 304 7.1E-9 T 12-10-2018 Vc3S01_0315 d9802615c513d984ff36a5b5e635ebbb 827 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 37 759 8.6E-167 T 12-10-2018 Vc3S01_0315 d9802615c513d984ff36a5b5e635ebbb 827 Pfam PF17092 Penicillin-binding protein OB-like domain 289 406 7.0E-32 T 12-10-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Vc3S01_0315 d9802615c513d984ff36a5b5e635ebbb 827 SUPERFAMILY SSF56601 183 809 5.81E-112 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Vc3S01_0315 d9802615c513d984ff36a5b5e635ebbb 827 Gene3D G3DSA:1.10.3810.10 20 214 2.5E-78 T 12-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Vc3S01_0315 d9802615c513d984ff36a5b5e635ebbb 827 Pfam PF00912 Transglycosylase 27 201 3.6E-63 T 12-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Vc3S01_0315 d9802615c513d984ff36a5b5e635ebbb 827 Pfam PF00905 Penicillin binding protein transpeptidase domain 410 587 4.4E-21 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Vc3S01_0315 d9802615c513d984ff36a5b5e635ebbb 827 SUPERFAMILY SSF53955 15 228 3.66E-78 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily Vc3S01_1679 2fa10f198980645e2af03c669ff091cc 66 PIRSF PIRSF036704 1 66 3.2E-34 T 12-10-2018 IPR014177 Putative formate dehydrogenase, TAT signal-containing Vc3S01_1679 2fa10f198980645e2af03c669ff091cc 66 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 9 31 4.9E-5 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Vc3S01_1679 2fa10f198980645e2af03c669ff091cc 66 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 9 37 2.5E-5 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Vc3S01_1679 2fa10f198980645e2af03c669ff091cc 66 TIGRFAM TIGR02811 formate_TAT: formate dehydrogenase region TAT target 1 66 2.2E-33 T 12-10-2018 IPR014177 Putative formate dehydrogenase, TAT signal-containing Vc3S01_2468 cdd3d406a4188562a096d33d5ac6fb16 262 Pfam PF00460 Flagella basal body rod protein 5 35 3.6E-12 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Vc3S01_2468 cdd3d406a4188562a096d33d5ac6fb16 262 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 261 4.5E-117 T 12-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 Vc3S01_2468 cdd3d406a4188562a096d33d5ac6fb16 262 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site Vc3S01_2468 cdd3d406a4188562a096d33d5ac6fb16 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 147 244 3.6E-30 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Vc3S01_2468 cdd3d406a4188562a096d33d5ac6fb16 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 137 2.2E-41 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Vc3S01_2468 cdd3d406a4188562a096d33d5ac6fb16 262 SUPERFAMILY SSF117143 93 223 3.66E-35 T 12-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like Vc3S01_2468 cdd3d406a4188562a096d33d5ac6fb16 262 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 184 260 9.1E-24 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Vc3S01_A1773 b8a526728d160ae55bb50c7d393250ac 316 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 6.1E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A1773 b8a526728d160ae55bb50c7d393250ac 316 Gene3D G3DSA:1.10.10.10 4 92 1.4E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A1773 b8a526728d160ae55bb50c7d393250ac 316 Gene3D G3DSA:3.40.190.10 163 266 3.2E-49 T 12-10-2018 Vc3S01_A1773 b8a526728d160ae55bb50c7d393250ac 316 SUPERFAMILY SSF53850 89 297 4.34E-38 T 12-10-2018 Vc3S01_A1773 b8a526728d160ae55bb50c7d393250ac 316 Gene3D G3DSA:3.40.190.10 93 290 3.2E-49 T 12-10-2018 Vc3S01_A1773 b8a526728d160ae55bb50c7d393250ac 316 Pfam PF03466 LysR substrate binding domain 88 292 1.2E-35 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_A1773 b8a526728d160ae55bb50c7d393250ac 316 SUPERFAMILY SSF46785 6 88 9.58E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_0260 8ca76482ade1f683aab08e6447d9e5af 141 Hamap MF_01177 HTH-type transcriptional repressor NsrR [nsrR]. 1 141 44.346 T 12-10-2018 IPR023761 Transcriptional repressor HTH, NsrR GO:0045892 Vc3S01_0260 8ca76482ade1f683aab08e6447d9e5af 141 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 12-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site Vc3S01_0260 8ca76482ade1f683aab08e6447d9e5af 141 Pfam PF02082 Transcriptional regulator 1 82 6.4E-24 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type Vc3S01_0260 8ca76482ade1f683aab08e6447d9e5af 141 Gene3D G3DSA:1.10.10.10 1 136 7.2E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_0260 8ca76482ade1f683aab08e6447d9e5af 141 SUPERFAMILY SSF46785 2 131 1.59E-30 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_0260 8ca76482ade1f683aab08e6447d9e5af 141 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 128 3.6E-36 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type Vc3S01_A0389 9735704f9ae86cbaf2548d149959d9cb 129 SUPERFAMILY SSF47175 24 119 5.77E-29 T 12-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 Vc3S01_A0389 9735704f9ae86cbaf2548d149959d9cb 129 Pfam PF07361 Cytochrome b562 24 119 6.4E-29 T 12-10-2018 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 Vc3S01_A0389 9735704f9ae86cbaf2548d149959d9cb 129 Gene3D G3DSA:1.20.120.10 18 126 3.7E-13 T 12-10-2018 Vc3S01_A0647 d6adf59998143fd8d0752ade60e90036 420 Pfam PF13520 Amino acid permease 11 391 2.0E-27 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Vc3S01_A0647 d6adf59998143fd8d0752ade60e90036 420 Gene3D G3DSA:1.20.1740.10 1 419 4.4E-59 T 12-10-2018 Vc3S01_A0647 d6adf59998143fd8d0752ade60e90036 420 PIRSF PIRSF006060 1 414 1.3E-57 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Vc3S01_0884 2c0db5e4660ab81d049fa62a6c288dda 161 Pfam PF03100 CcmE 4 136 6.8E-45 T 12-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 Vc3S01_0884 2c0db5e4660ab81d049fa62a6c288dda 161 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 146 32.396 T 12-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 Vc3S01_0884 2c0db5e4660ab81d049fa62a6c288dda 161 SUPERFAMILY SSF82093 30 142 3.53E-38 T 12-10-2018 IPR036127 CcmE-like superfamily GO:0005886|GO:0017003|GO:0017004 Vc3S01_0884 2c0db5e4660ab81d049fa62a6c288dda 161 Gene3D G3DSA:2.40.50.140 30 142 4.8E-40 T 12-10-2018 Vc3S01_p40041 ad3359489f0c7dff9795213285ed4d9d 168 SMART SM00271 4 59 8.3E-14 T 12-10-2018 IPR001623 DnaJ domain Vc3S01_p40041 ad3359489f0c7dff9795213285ed4d9d 168 SUPERFAMILY SSF46565 3 56 1.96E-16 T 12-10-2018 IPR036869 Chaperone J-domain superfamily Vc3S01_p40041 ad3359489f0c7dff9795213285ed4d9d 168 Pfam PF00226 DnaJ domain 9 56 1.2E-12 T 12-10-2018 IPR001623 DnaJ domain Vc3S01_p40041 ad3359489f0c7dff9795213285ed4d9d 168 PRINTS PR00625 DnaJ domain signature 25 40 1.0E-8 T 12-10-2018 IPR001623 DnaJ domain Vc3S01_p40041 ad3359489f0c7dff9795213285ed4d9d 168 PRINTS PR00625 DnaJ domain signature 7 25 1.0E-8 T 12-10-2018 IPR001623 DnaJ domain Vc3S01_p40041 ad3359489f0c7dff9795213285ed4d9d 168 PRINTS PR00625 DnaJ domain signature 49 69 1.0E-8 T 12-10-2018 IPR001623 DnaJ domain Vc3S01_p40041 ad3359489f0c7dff9795213285ed4d9d 168 Gene3D G3DSA:1.10.287.110 2 86 7.2E-16 T 12-10-2018 IPR036869 Chaperone J-domain superfamily Vc3S01_2904 bdd700363c91964ca63099ba0beb1a6a 574 Pfam PF02080 TrkA-C domain 293 349 1.3E-11 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Vc3S01_2904 bdd700363c91964ca63099ba0beb1a6a 574 Pfam PF02080 TrkA-C domain 209 276 7.8E-11 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Vc3S01_2904 bdd700363c91964ca63099ba0beb1a6a 574 Gene3D G3DSA:3.30.70.1450 206 279 4.8E-13 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Vc3S01_2904 bdd700363c91964ca63099ba0beb1a6a 574 Gene3D G3DSA:3.30.70.1450 289 360 8.8E-12 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Vc3S01_2904 bdd700363c91964ca63099ba0beb1a6a 574 SUPERFAMILY SSF116726 290 349 1.96E-13 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Vc3S01_2904 bdd700363c91964ca63099ba0beb1a6a 574 SUPERFAMILY SSF116726 206 282 4.58E-16 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Vc3S01_2904 bdd700363c91964ca63099ba0beb1a6a 574 Pfam PF03600 Citrate transporter 30 518 3.1E-31 T 12-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 Vc3S01_0461 326747e177d76632da3c2b03740c343a 376 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 228 256 - T 12-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 Vc3S01_0461 326747e177d76632da3c2b03740c343a 376 Gene3D G3DSA:1.10.530.10 190 370 6.7E-50 T 12-10-2018 Vc3S01_0461 326747e177d76632da3c2b03740c343a 376 SUPERFAMILY SSF53955 186 371 3.66E-36 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily Vc3S01_0461 326747e177d76632da3c2b03740c343a 376 Pfam PF01464 Transglycosylase SLT domain 211 332 2.8E-28 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 Vc3S01_0461 326747e177d76632da3c2b03740c343a 376 Pfam PF11873 Domain of unknown function (DUF3393) 3 205 5.3E-80 T 12-10-2018 IPR024570 Murein transglycosylase-C, N-terminal Vc3S01_1418 0455da23b249b471d4d23e57f6cebb37 397 Gene3D G3DSA:3.40.50.1970 12 200 2.0E-53 T 12-10-2018 Vc3S01_1418 0455da23b249b471d4d23e57f6cebb37 397 SUPERFAMILY SSF56796 25 394 2.22E-108 T 12-10-2018 Vc3S01_1418 0455da23b249b471d4d23e57f6cebb37 397 Gene3D G3DSA:1.20.1090.10 201 395 6.6E-51 T 12-10-2018 Vc3S01_1418 0455da23b249b471d4d23e57f6cebb37 397 Pfam PF00465 Iron-containing alcohol dehydrogenase 27 387 4.1E-104 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 Vc3S01_1418 0455da23b249b471d4d23e57f6cebb37 397 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 276 296 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 Vc3S01_2712 c71e356de0f389d25c83a26b5cff7238 101 Pfam PF01022 Bacterial regulatory protein, arsR family 23 67 1.3E-16 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Vc3S01_2712 c71e356de0f389d25c83a26b5cff7238 101 SMART SM00418 15 93 7.7E-29 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Vc3S01_2712 c71e356de0f389d25c83a26b5cff7238 101 SUPERFAMILY SSF46785 9 96 1.17E-25 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_2712 c71e356de0f389d25c83a26b5cff7238 101 Gene3D G3DSA:1.10.10.10 1 98 2.8E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_2712 c71e356de0f389d25c83a26b5cff7238 101 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 9.5E-14 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Vc3S01_2712 c71e356de0f389d25c83a26b5cff7238 101 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 36 47 9.5E-14 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Vc3S01_2712 c71e356de0f389d25c83a26b5cff7238 101 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 17 32 9.5E-14 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Vc3S01_2712 c71e356de0f389d25c83a26b5cff7238 101 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 9.5E-14 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Vc3S01_0300 4455857b0c549e0e6b30be983f11b216 386 PIRSF PIRSF001434 1 385 7.2E-131 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Vc3S01_0300 4455857b0c549e0e6b30be983f11b216 386 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 381 6.2E-135 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Vc3S01_0300 4455857b0c549e0e6b30be983f11b216 386 Gene3D G3DSA:3.90.1150.10 249 386 7.1E-51 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Vc3S01_0300 4455857b0c549e0e6b30be983f11b216 386 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 4 383 1.2E-202 T 12-10-2018 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48|MetaCyc: PWY-801 Vc3S01_0300 4455857b0c549e0e6b30be983f11b216 386 Gene3D G3DSA:3.40.640.10 3 248 2.6E-82 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Vc3S01_0300 4455857b0c549e0e6b30be983f11b216 386 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 191 205 - T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Vc3S01_0300 4455857b0c549e0e6b30be983f11b216 386 SUPERFAMILY SSF53383 9 383 9.57E-116 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Vc3S01_p30102 e364d88fdedca34ae0f83e7ca3612d1c 119 Pfam PF05509 TraY domain 10 55 5.5E-17 T 12-10-2018 IPR008876 Relaxosome protein TraY GO:0000746|GO:0003677 Vc3S01_p30055 f86ce898132535135dbfe59ffdc75683 1421 PRINTS PR01341 Salmonella virulence plasmid 65kDa B protein signature 127 145 5.9E-36 T 12-10-2018 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 Vc3S01_p30055 f86ce898132535135dbfe59ffdc75683 1421 PRINTS PR01341 Salmonella virulence plasmid 65kDa B protein signature 29 50 5.9E-36 T 12-10-2018 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 Vc3S01_p30055 f86ce898132535135dbfe59ffdc75683 1421 PRINTS PR01341 Salmonella virulence plasmid 65kDa B protein signature 88 104 5.9E-36 T 12-10-2018 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 Vc3S01_p30055 f86ce898132535135dbfe59ffdc75683 1421 PRINTS PR01341 Salmonella virulence plasmid 65kDa B protein signature 191 209 5.9E-36 T 12-10-2018 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 Vc3S01_p30055 f86ce898132535135dbfe59ffdc75683 1421 PRINTS PR01341 Salmonella virulence plasmid 65kDa B protein signature 301 319 5.9E-36 T 12-10-2018 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 Vc3S01_p30055 f86ce898132535135dbfe59ffdc75683 1421 PRINTS PR01341 Salmonella virulence plasmid 65kDa B protein signature 266 285 5.9E-36 T 12-10-2018 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 Vc3S01_p30055 f86ce898132535135dbfe59ffdc75683 1421 Pfam PF03534 Salmonella virulence plasmid 65kDa B protein 32 319 7.1E-88 T 12-10-2018 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 Vc3S01_p30055 f86ce898132535135dbfe59ffdc75683 1421 Pfam PF12256 Insecticide toxin TcdB middle/N-terminal region 646 798 5.1E-25 T 12-10-2018 IPR022045 Insecticide toxin TcdB middle/N-terminal Vc3S01_p30055 f86ce898132535135dbfe59ffdc75683 1421 Pfam PF12255 Insecticide toxin TcdB middle/C-terminal region 868 1012 7.8E-48 T 12-10-2018 IPR022044 Insecticide toxin TcdB middle/C-terminal Vc3S01_p30055 f86ce898132535135dbfe59ffdc75683 1421 SUPERFAMILY SSF69318 452 690 4.97E-19 T 12-10-2018 Vc3S01_3171 5d3886a61c059595600c9e2fe1c748df 153 Hamap MF_00598 Protein Smg [smg]. 1 153 29.24 T 12-10-2018 IPR007456 Smg Vc3S01_3171 5d3886a61c059595600c9e2fe1c748df 153 Pfam PF04361 Protein of unknown function (DUF494) 1 153 8.0E-56 T 12-10-2018 IPR007456 Smg Vc3S01_1579 3e017023ce0e5b92ae0a8cce98777931 167 PIRSF PIRSF028301 1 167 1.3E-56 T 12-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 Vc3S01_1579 3e017023ce0e5b92ae0a8cce98777931 167 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 6 160 1.5E-53 T 12-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 Vc3S01_1579 3e017023ce0e5b92ae0a8cce98777931 167 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 8 159 1.6E-56 T 12-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 Vc3S01_p20021 a8c7d019dcb382241d13d41433d11a5c 229 Pfam PF11393 Type-IV b secretion system, inner-membrane complex component 50 149 5.6E-14 T 12-10-2018 IPR021055 Type-IV b secretion system, inner-membrane complex component Vc3S01_A0303 770c07f6d3e4234648c6139cea53e2f1 261 Pfam PF01636 Phosphotransferase enzyme family 112 161 6.4E-12 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase Vc3S01_A0303 770c07f6d3e4234648c6139cea53e2f1 261 Gene3D G3DSA:3.90.1200.10 74 254 5.2E-12 T 12-10-2018 Vc3S01_A0303 770c07f6d3e4234648c6139cea53e2f1 261 SUPERFAMILY SSF56112 2 225 3.79E-31 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily Vc3S01_1996 1b59ad72392ccc95fb72e139da63e60e 202 Pfam PF01066 CDP-alcohol phosphatidyltransferase 27 89 2.9E-9 T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Vc3S01_1996 1b59ad72392ccc95fb72e139da63e60e 202 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 68 89 - T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Vc3S01_1996 1b59ad72392ccc95fb72e139da63e60e 202 Gene3D G3DSA:1.20.120.1760 7 199 3.2E-19 T 12-10-2018 Vc3S01_0559 5dd30b51cbc01ae3aa77377770055929 246 Gene3D G3DSA:2.60.440.10 6 245 1.6E-88 T 12-10-2018 IPR027462 Z ring-associated protein D, C-terminal Vc3S01_0559 5dd30b51cbc01ae3aa77377770055929 246 Gene3D G3DSA:1.10.3900.10 12 178 1.6E-88 T 12-10-2018 Vc3S01_0559 5dd30b51cbc01ae3aa77377770055929 246 SUPERFAMILY SSF160950 1 245 2.09E-94 T 12-10-2018 IPR036268 ZapD domain superfamily Vc3S01_0559 5dd30b51cbc01ae3aa77377770055929 246 Hamap MF_01092 Cell division protein ZapD [zapD]. 3 245 32.812 T 12-10-2018 IPR009777 Cell division protein ZapD Vc3S01_0559 5dd30b51cbc01ae3aa77377770055929 246 Pfam PF07072 Cell division protein 18 224 6.4E-76 T 12-10-2018 IPR009777 Cell division protein ZapD Vc3S01_1755 983116793c2d56d010e94a269dddb98a 504 Pfam PF13552 Protein of unknown function (DUF4127) 4 496 4.3E-159 T 12-10-2018 IPR025394 Protein of unknown function DUF4127 Vc3S01_A1984 ad049ec562e6947965721aed1d02d082 231 PIRSF PIRSF028137 1 231 7.8E-108 T 12-10-2018 IPR016870 Uncharacterised conserved protein UCP028137, membrane Vc3S01_A0210 9ab3ae1713912386e52ac1495abf83ef 696 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 56 695 2.4E-93 T 12-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 Vc3S01_A0210 9ab3ae1713912386e52ac1495abf83ef 696 Gene3D G3DSA:2.40.170.20 163 696 2.3E-100 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Vc3S01_A0210 9ab3ae1713912386e52ac1495abf83ef 696 Pfam PF00593 TonB dependent receptor 239 695 1.5E-51 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Vc3S01_A0210 9ab3ae1713912386e52ac1495abf83ef 696 Pfam PF07715 TonB-dependent Receptor Plug Domain 54 151 5.2E-17 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain Vc3S01_A0210 9ab3ae1713912386e52ac1495abf83ef 696 Gene3D G3DSA:2.170.130.10 36 162 5.3E-30 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Vc3S01_A0210 9ab3ae1713912386e52ac1495abf83ef 696 SUPERFAMILY SSF56935 18 696 2.23E-119 T 12-10-2018 Vc3S01_0965 498f980c30a4737f5ab53ffb0bb8b447 331 Pfam PF01435 Peptidase family M48 154 329 1.9E-29 T 12-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 Vc3S01_0965 498f980c30a4737f5ab53ffb0bb8b447 331 Gene3D G3DSA:3.30.2010.10 149 228 3.8E-5 T 12-10-2018 Vc3S01_0733 a1c674a10d10e03264355fd0f29d137c 142 TIGRFAM TIGR03391 FeS_syn_CsdE: cysteine desulfurase, sulfur acceptor subunit CsdE 7 140 6.9E-48 T 12-10-2018 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE Vc3S01_0733 a1c674a10d10e03264355fd0f29d137c 142 SUPERFAMILY SSF82649 4 141 8.37E-50 T 12-10-2018 Vc3S01_0733 a1c674a10d10e03264355fd0f29d137c 142 Gene3D G3DSA:3.90.1010.10 1 142 2.6E-52 T 12-10-2018 Vc3S01_0733 a1c674a10d10e03264355fd0f29d137c 142 Pfam PF02657 Fe-S metabolism associated domain 21 139 4.9E-47 T 12-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like Vc3S01_A1437 f1b9b81d5bda3777ebb13d213eaf73e3 68 Pfam PF04964 Flp/Fap pilin component 16 62 1.6E-15 T 12-10-2018 IPR007047 Flp/Fap pilin component Vc3S01_A0340 b8c73ffa883dae1b3a8a2036a04b12ee 71 Pfam PF09493 Tryptophan-rich protein (DUF2389) 12 71 2.3E-21 T 12-10-2018 IPR012663 Conserved hypothetical protein CHP02450, tryptophan-rich Vc3S01_A0340 b8c73ffa883dae1b3a8a2036a04b12ee 71 TIGRFAM TIGR02450 TIGR02450: tryptophan-rich conserved hypothetical protein 10 71 2.8E-22 T 12-10-2018 IPR012663 Conserved hypothetical protein CHP02450, tryptophan-rich Vc3S01_1958 32dc895e871b3a16e3009a5b3543ad4f 391 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 5 380 23.638 T 12-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 Vc3S01_1958 32dc895e871b3a16e3009a5b3543ad4f 391 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 8 373 9.4E-192 T 12-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 Vc3S01_1958 32dc895e871b3a16e3009a5b3543ad4f 391 Gene3D G3DSA:1.20.1530.10 3 381 1.3E-147 T 12-10-2018 IPR023171 Na/H antiporter domain superfamily Vc3S01_1958 32dc895e871b3a16e3009a5b3543ad4f 391 Pfam PF06965 Na+/H+ antiporter 1 7 373 2.0E-144 T 12-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 Vc3S01_A1255 fddd2dfec07db84cddb3ae35c4acf83a 150 Gene3D G3DSA:3.90.79.10 4 138 8.4E-25 T 12-10-2018 Vc3S01_A1255 fddd2dfec07db84cddb3ae35c4acf83a 150 Pfam PF00293 NUDIX domain 12 123 4.2E-20 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Vc3S01_A1255 fddd2dfec07db84cddb3ae35c4acf83a 150 SUPERFAMILY SSF55811 6 133 2.71E-23 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Vc3S01_1446 f6fdc09ad362a3b8e72b08e2e6029ebd 1123 SUPERFAMILY SSF48208 562 1095 2.38E-39 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Vc3S01_1446 f6fdc09ad362a3b8e72b08e2e6029ebd 1123 Gene3D G3DSA:1.50.10.10 602 1031 7.6E-80 T 12-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 Vc3S01_1446 f6fdc09ad362a3b8e72b08e2e6029ebd 1123 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 685 981 1.1E-12 T 12-10-2018 IPR033432 Glycosyl hydrolase 36, catalytic domain Vc3S01_1597 d856f440cd1dd9cc6a74ad42a50fc1ff 479 ProSitePatterns PS00893 Nudix box signature. 59 80 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Vc3S01_1597 d856f440cd1dd9cc6a74ad42a50fc1ff 479 Pfam PF01569 PAP2 superfamily 242 353 4.6E-7 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Vc3S01_1597 d856f440cd1dd9cc6a74ad42a50fc1ff 479 SUPERFAMILY SSF48317 149 354 6.32E-8 T 12-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily Vc3S01_1597 d856f440cd1dd9cc6a74ad42a50fc1ff 479 SUPERFAMILY SSF55811 27 150 9.07E-18 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Vc3S01_1597 d856f440cd1dd9cc6a74ad42a50fc1ff 479 Gene3D G3DSA:3.90.79.10 17 125 3.6E-14 T 12-10-2018 Vc3S01_1597 d856f440cd1dd9cc6a74ad42a50fc1ff 479 Pfam PF00293 NUDIX domain 33 121 3.9E-11 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Vc3S01_0118 565f49fae9b5cb062faaef737f080398 73 Pfam PF10678 Protein of unknown function (DUF2492) 3 72 1.2E-23 T 12-10-2018 IPR019620 Putative metal-binding protein Vc3S01_0118 565f49fae9b5cb062faaef737f080398 73 TIGRFAM TIGR03853 matur_matur: putative metal-binding protein 3 73 1.2E-24 T 12-10-2018 IPR019620 Putative metal-binding protein Vc3S01_A1930 a7516f49b582d3351d90dc58937f896e 475 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 37 54 - T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 Vc3S01_A1930 a7516f49b582d3351d90dc58937f896e 475 SUPERFAMILY SSF55604 26 94 3.53E-20 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 Vc3S01_A1930 a7516f49b582d3351d90dc58937f896e 475 Gene3D G3DSA:3.30.1360.60 17 94 1.2E-23 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 Vc3S01_A1930 a7516f49b582d3351d90dc58937f896e 475 Pfam PF02378 Phosphotransferase system, EIIC 124 413 1.7E-27 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 Vc3S01_A1930 a7516f49b582d3351d90dc58937f896e 475 Pfam PF00367 phosphotransferase system, EIIB 26 59 2.4E-15 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 Vc3S01_2191 7cdd43b5f19a3b6bbc3075a4c8ec0024 139 PIRSF PIRSF003230 2 138 2.6E-46 T 12-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 Vc3S01_2191 7cdd43b5f19a3b6bbc3075a4c8ec0024 139 Pfam PF03061 Thioesterase superfamily 22 107 3.9E-18 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 Vc3S01_2191 7cdd43b5f19a3b6bbc3075a4c8ec0024 139 SUPERFAMILY SSF54637 5 133 9.43E-41 T 12-10-2018 IPR029069 HotDog domain superfamily Vc3S01_2191 7cdd43b5f19a3b6bbc3075a4c8ec0024 139 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 8 131 5.3E-50 T 12-10-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 Vc3S01_2191 7cdd43b5f19a3b6bbc3075a4c8ec0024 139 Gene3D G3DSA:3.10.129.10 3 137 9.4E-42 T 12-10-2018 Vc3S01_2191 7cdd43b5f19a3b6bbc3075a4c8ec0024 139 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 12 127 2.2E-37 T 12-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 Vc3S01_1846 142fc312f799fcd69800a6813dcae727 231 Pfam PF08732 HIM1 80 176 1.7E-9 T 12-10-2018 IPR014843 Protein Him1/Fmp52 Vc3S01_1846 142fc312f799fcd69800a6813dcae727 231 Gene3D G3DSA:3.40.50.720 1 231 4.5E-47 T 12-10-2018 Vc3S01_1846 142fc312f799fcd69800a6813dcae727 231 SUPERFAMILY SSF51735 5 217 8.79E-32 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_2021 2723967de69791c4179020022649a860 539 SUPERFAMILY SSF53850 34 535 1.63E-128 T 12-10-2018 Vc3S01_2021 2723967de69791c4179020022649a860 539 Gene3D G3DSA:3.90.76.10 44 216 3.2E-142 T 12-10-2018 Vc3S01_2021 2723967de69791c4179020022649a860 539 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 77 454 2.2E-84 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain Vc3S01_2021 2723967de69791c4179020022649a860 539 Gene3D G3DSA:3.10.105.10 296 514 3.2E-142 T 12-10-2018 Vc3S01_2021 2723967de69791c4179020022649a860 539 PIRSF PIRSF002741 2 538 5.3E-90 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Vc3S01_2021 2723967de69791c4179020022649a860 539 Gene3D G3DSA:3.40.190.10 217 526 3.2E-142 T 12-10-2018 Vc3S01_A1755 b5549836a3ae6a514fc4c0925762bf51 129 SUPERFAMILY SSF54593 1 128 2.55E-24 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Vc3S01_A1755 b5549836a3ae6a514fc4c0925762bf51 129 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 127 4.0E-11 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Vc3S01_A1755 b5549836a3ae6a514fc4c0925762bf51 129 Gene3D G3DSA:3.10.180.10 1 129 1.1E-31 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Vc3S01_A0365 5c66e3110e19456b7ff1f73a4e4741ed 122 PRINTS PR00956 Flagellar motor switch protein FliN signature 60 76 5.6E-18 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Vc3S01_A0365 5c66e3110e19456b7ff1f73a4e4741ed 122 PRINTS PR00956 Flagellar motor switch protein FliN signature 89 104 5.6E-18 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Vc3S01_A0365 5c66e3110e19456b7ff1f73a4e4741ed 122 PRINTS PR00956 Flagellar motor switch protein FliN signature 43 59 5.6E-18 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Vc3S01_A0365 5c66e3110e19456b7ff1f73a4e4741ed 122 PRINTS PR00956 Flagellar motor switch protein FliN signature 76 89 5.6E-18 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Vc3S01_A0365 5c66e3110e19456b7ff1f73a4e4741ed 122 Gene3D G3DSA:2.30.330.10 32 118 1.6E-23 T 12-10-2018 IPR036429 SpoA-like superfamily Vc3S01_A0365 5c66e3110e19456b7ff1f73a4e4741ed 122 SUPERFAMILY SSF101801 40 115 3.79E-19 T 12-10-2018 IPR036429 SpoA-like superfamily Vc3S01_A0365 5c66e3110e19456b7ff1f73a4e4741ed 122 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 41 115 5.8E-29 T 12-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 Vc3S01_A0365 5c66e3110e19456b7ff1f73a4e4741ed 122 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 45 112 3.4E-20 T 12-10-2018 IPR001543 Surface presentation of antigen (SpoA) Vc3S01_0410 85cc2bdae5a0357093dbcef3e3f4fa08 447 SUPERFAMILY SSF111283 12 447 7.59E-130 T 12-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 Vc3S01_0410 85cc2bdae5a0357093dbcef3e3f4fa08 447 Pfam PF01523 Putative modulator of DNA gyrase 32 324 2.7E-61 T 12-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 Vc3S01_0410 85cc2bdae5a0357093dbcef3e3f4fa08 447 Gene3D G3DSA:3.30.2290.10 7 232 2.2E-83 T 12-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal Vc3S01_A1238 755778a9bd1a215d0bf6839e40511a44 173 Gene3D G3DSA:3.40.630.30 1 153 3.0E-23 T 12-10-2018 Vc3S01_A1238 755778a9bd1a215d0bf6839e40511a44 173 Pfam PF13527 Acetyltransferase (GNAT) domain 9 123 1.4E-14 T 12-10-2018 Vc3S01_A1238 755778a9bd1a215d0bf6839e40511a44 173 SUPERFAMILY SSF55729 9 129 4.75E-24 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_A0097 28e4bf38d291e52c54f1c7ec30b8ac35 294 Gene3D G3DSA:1.10.3720.10 19 285 2.0E-56 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_A0097 28e4bf38d291e52c54f1c7ec30b8ac35 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 276 6.7E-19 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Vc3S01_A0097 28e4bf38d291e52c54f1c7ec30b8ac35 294 SUPERFAMILY SSF161098 26 294 1.31E-61 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_A1688 acbff4dc41c5f871f7b7a3b976d256cd 219 Gene3D G3DSA:3.40.50.1000 6 216 1.0E-55 T 12-10-2018 IPR023214 HAD superfamily Vc3S01_A1688 acbff4dc41c5f871f7b7a3b976d256cd 219 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 5 204 7.8E-50 T 12-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like Vc3S01_A1688 acbff4dc41c5f871f7b7a3b976d256cd 219 SUPERFAMILY SSF56784 1 210 3.05E-29 T 12-10-2018 IPR036412 HAD-like superfamily Vc3S01_A1688 acbff4dc41c5f871f7b7a3b976d256cd 219 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 190 3.6E-26 T 12-10-2018 Vc3S01_A1688 acbff4dc41c5f871f7b7a3b976d256cd 219 Gene3D G3DSA:1.20.1440.100 17 90 1.0E-55 T 12-10-2018 Vc3S01_A1688 acbff4dc41c5f871f7b7a3b976d256cd 219 Pfam PF12710 haloacid dehalogenase-like hydrolase 7 189 7.1E-26 T 12-10-2018 Vc3S01_0064 336ec0edcb79078c81a129e275024c28 252 Pfam PF09836 Putative DNA-binding domain 6 94 5.4E-23 T 12-10-2018 IPR018640 Putative DNA-binding domain, bacteria Vc3S01_0980 c82cc1b8d6af1ab12e201148fff0f471 116 Gene3D G3DSA:3.40.30.10 6 111 1.2E-30 T 12-10-2018 Vc3S01_0980 c82cc1b8d6af1ab12e201148fff0f471 116 SUPERFAMILY SSF52833 6 109 2.37E-34 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Vc3S01_0980 c82cc1b8d6af1ab12e201148fff0f471 116 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 9 105 5.0E-46 T 12-10-2018 IPR004480 Monothiol glutaredoxin-related Vc3S01_0980 c82cc1b8d6af1ab12e201148fff0f471 116 PIRSF PIRSF005894 2 112 2.6E-52 T 12-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 Vc3S01_0980 c82cc1b8d6af1ab12e201148fff0f471 116 Pfam PF00462 Glutaredoxin 21 85 5.4E-17 T 12-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 Vc3S01_A1178 a6f8cd44f41ef194b3c6dcbae9885080 492 Gene3D G3DSA:3.30.70.270 305 486 1.6E-37 T 12-10-2018 Vc3S01_A1178 a6f8cd44f41ef194b3c6dcbae9885080 492 SUPERFAMILY SSF55073 320 487 5.34E-31 T 12-10-2018 IPR029787 Nucleotide cyclase Vc3S01_A1178 a6f8cd44f41ef194b3c6dcbae9885080 492 Pfam PF00990 Diguanylate cyclase, GGDEF domain 316 482 4.3E-29 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A1178 a6f8cd44f41ef194b3c6dcbae9885080 492 Gene3D G3DSA:1.10.8.500 255 304 1.5E-5 T 12-10-2018 Vc3S01_A1178 a6f8cd44f41ef194b3c6dcbae9885080 492 SMART SM00267 304 487 1.1E-32 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A1178 a6f8cd44f41ef194b3c6dcbae9885080 492 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 312 487 4.5E-31 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A1178 a6f8cd44f41ef194b3c6dcbae9885080 492 SUPERFAMILY SSF158472 257 306 8.5E-5 T 12-10-2018 Vc3S01_A0172 ba6ef2115e2383353a95bec180710b91 377 SUPERFAMILY SSF110738 1 375 1.14E-141 T 12-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 Vc3S01_A0172 ba6ef2115e2383353a95bec180710b91 377 PIRSF PIRSF006078 1 376 5.1E-138 T 12-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 Vc3S01_A0172 ba6ef2115e2383353a95bec180710b91 377 Gene3D G3DSA:3.90.1510.10 42 276 1.3E-141 T 12-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 Vc3S01_A0172 ba6ef2115e2383353a95bec180710b91 377 Gene3D G3DSA:3.40.50.10350 1 362 1.3E-141 T 12-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold Vc3S01_A0172 ba6ef2115e2383353a95bec180710b91 377 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 375 9.1E-161 T 12-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 Vc3S01_A0172 ba6ef2115e2383353a95bec180710b91 377 Pfam PF02595 Glycerate kinase family 3 374 1.5E-150 T 12-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 Vc3S01_1863 8a42d7eaa14e301ac77d689272dc52d7 327 Gene3D G3DSA:3.40.50.12250 44 304 5.4E-79 T 12-10-2018 Vc3S01_1863 8a42d7eaa14e301ac77d689272dc52d7 327 Pfam PF01497 Periplasmic binding protein 90 299 1.4E-30 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain Vc3S01_1863 8a42d7eaa14e301ac77d689272dc52d7 327 Gene3D G3DSA:3.40.50.12260 193 296 5.4E-79 T 12-10-2018 Vc3S01_1863 8a42d7eaa14e301ac77d689272dc52d7 327 SUPERFAMILY SSF53807 40 307 1.61E-61 T 12-10-2018 Vc3S01_1514 a58b9d4ca9e0be04a5e2b9b2a877c638 279 SUPERFAMILY SSF53213 2 278 3.4E-95 T 12-10-2018 Vc3S01_1514 a58b9d4ca9e0be04a5e2b9b2a877c638 279 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 8 260 8.7E-64 T 12-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 Vc3S01_1514 a58b9d4ca9e0be04a5e2b9b2a877c638 279 Gene3D G3DSA:3.40.830.10 1 279 9.9E-84 T 12-10-2018 Vc3S01_A0755 3097066705a30b28848897dcec0cc4c5 119 Gene3D G3DSA:3.40.30.10 20 118 1.2E-13 T 12-10-2018 Vc3S01_A0755 3097066705a30b28848897dcec0cc4c5 119 SUPERFAMILY SSF52833 41 118 2.48E-18 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Vc3S01_A0755 3097066705a30b28848897dcec0cc4c5 119 Pfam PF00462 Glutaredoxin 43 96 1.4E-11 T 12-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 Vc3S01_A0171 6c3c6ae8ce428b0448e020dc20ebcc51 377 Pfam PF13556 PucR C-terminal helix-turn-helix domain 315 371 3.5E-22 T 12-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain Vc3S01_A0171 6c3c6ae8ce428b0448e020dc20ebcc51 377 Pfam PF05651 Putative sugar diacid recognition 4 137 2.6E-52 T 12-10-2018 IPR008599 Putative sugar diacid recognition Vc3S01_A0171 6c3c6ae8ce428b0448e020dc20ebcc51 377 Gene3D G3DSA:1.10.10.2840 248 377 1.4E-23 T 12-10-2018 Vc3S01_1670 4cc30ebc8d52d8531b656c84478db7b2 256 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 251 1.5E-18 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Vc3S01_1670 4cc30ebc8d52d8531b656c84478db7b2 256 Gene3D G3DSA:1.10.3720.10 4 256 2.1E-47 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_1670 4cc30ebc8d52d8531b656c84478db7b2 256 SUPERFAMILY SSF161098 4 254 4.67E-55 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_p30052 c6a3f72134f03d6997fb9d0704e6ca27 412 Pfam PF00872 Transposase, Mutator family 17 380 7.7E-70 T 12-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 Vc3S01_1795 7821fcd08cca63b0825e91a42c68ebac 220 Pfam PF10881 Protein of unknown function (DUF2726) 38 160 4.0E-35 T 12-10-2018 IPR024402 Domain of unknown function DUF2726 Vc3S01_1795 7821fcd08cca63b0825e91a42c68ebac 220 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 174 210 2.5E-6 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 Vc3S01_1795 7821fcd08cca63b0825e91a42c68ebac 220 PIRSF PIRSF028063 1 220 2.3E-139 T 12-10-2018 IPR014538 Uncharacterised conserved protein, topoisomerase zinc finger Vc3S01_A0549 bff40f44333dd8e6993e6f212087a6cc 173 Gene3D G3DSA:3.40.50.620 1 173 9.3E-45 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Vc3S01_A0549 bff40f44333dd8e6993e6f212087a6cc 173 Pfam PF01467 Cytidylyltransferase-like 7 144 7.1E-7 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Vc3S01_A0549 bff40f44333dd8e6993e6f212087a6cc 173 SUPERFAMILY SSF52374 1 171 2.88E-26 T 12-10-2018 Vc3S01_A1157 1ac49268bd9e75c0f93d1ac59478873b 420 Gene3D G3DSA:3.90.770.10 92 405 3.8E-112 T 12-10-2018 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain superfamily GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 Vc3S01_A1157 1ac49268bd9e75c0f93d1ac59478873b 420 Gene3D G3DSA:3.30.70.420 146 261 3.8E-112 T 12-10-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 Vc3S01_A1157 1ac49268bd9e75c0f93d1ac59478873b 420 SUPERFAMILY SSF56542 27 409 3.01E-80 T 12-10-2018 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain superfamily GO:0015936|GO:0016616|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 Vc3S01_A1157 1ac49268bd9e75c0f93d1ac59478873b 420 ProSitePatterns PS00318 Hydroxymethylglutaryl-coenzyme A reductases signature 2. 356 363 - T 12-10-2018 IPR023076 Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 Vc3S01_A1157 1ac49268bd9e75c0f93d1ac59478873b 420 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 344 365 1.9E-39 T 12-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 Vc3S01_A1157 1ac49268bd9e75c0f93d1ac59478873b 420 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 112 132 1.9E-39 T 12-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 Vc3S01_A1157 1ac49268bd9e75c0f93d1ac59478873b 420 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 81 102 1.9E-39 T 12-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 Vc3S01_A1157 1ac49268bd9e75c0f93d1ac59478873b 420 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 242 267 1.9E-39 T 12-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 Vc3S01_A1157 1ac49268bd9e75c0f93d1ac59478873b 420 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 201 219 1.9E-39 T 12-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 Vc3S01_A1157 1ac49268bd9e75c0f93d1ac59478873b 420 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 291 317 1.9E-39 T 12-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 Vc3S01_A1157 1ac49268bd9e75c0f93d1ac59478873b 420 Pfam PF00368 Hydroxymethylglutaryl-coenzyme A reductase 50 419 3.2E-115 T 12-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 Vc3S01_A1157 1ac49268bd9e75c0f93d1ac59478873b 420 SUPERFAMILY SSF55035 146 261 5.49E-36 T 12-10-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 Vc3S01_p40037 2836dfa1894b0b0e86cd6aef2a7baab4 142 Pfam PF03713 Domain of unknown function (DUF305) 1 128 4.3E-8 T 12-10-2018 IPR005183 Domain of unknown function DUF305 Vc3S01_p40037 2836dfa1894b0b0e86cd6aef2a7baab4 142 Gene3D G3DSA:1.20.1260.10 1 129 2.8E-10 T 12-10-2018 IPR012347 Ferritin-like Vc3S01_A0046 e1db2b3c06e912825ad994a0ad85459a 277 SMART SM00342 187 269 4.1E-19 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_A0046 e1db2b3c06e912825ad994a0ad85459a 277 Gene3D G3DSA:1.10.10.60 168 275 1.7E-19 T 12-10-2018 Vc3S01_A0046 e1db2b3c06e912825ad994a0ad85459a 277 SUPERFAMILY SSF46689 222 273 1.12E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_A0046 e1db2b3c06e912825ad994a0ad85459a 277 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 223 265 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Vc3S01_A0046 e1db2b3c06e912825ad994a0ad85459a 277 Pfam PF12833 Helix-turn-helix domain 197 271 2.5E-10 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Vc3S01_1349 37226ab1d8aa8f61c768309bee7c597c 152 SUPERFAMILY SSF55729 5 139 3.38E-24 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_1349 37226ab1d8aa8f61c768309bee7c597c 152 Pfam PF00583 Acetyltransferase (GNAT) family 41 132 9.1E-13 T 12-10-2018 IPR000182 GNAT domain Vc3S01_1349 37226ab1d8aa8f61c768309bee7c597c 152 Gene3D G3DSA:3.40.630.30 1 142 1.4E-24 T 12-10-2018 Vc3S01_0534 7c493c62401c1db1ffc85b5f955c735c 160 Gene3D G3DSA:3.90.950.20 1 160 4.5E-59 T 12-10-2018 IPR036653 CinA-like, C-terminal Vc3S01_0534 7c493c62401c1db1ffc85b5f955c735c 160 SUPERFAMILY SSF142433 5 159 1.29E-55 T 12-10-2018 IPR036653 CinA-like, C-terminal Vc3S01_0534 7c493c62401c1db1ffc85b5f955c735c 160 Pfam PF02464 Competence-damaged protein 5 158 7.9E-58 T 12-10-2018 IPR008136 CinA, C-terminal Vc3S01_0534 7c493c62401c1db1ffc85b5f955c735c 160 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 12 158 3.1E-51 T 12-10-2018 IPR008136 CinA, C-terminal Vc3S01_2316 25987f4191b2b02169b0d755047f5daf 444 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 28 440 1.6E-128 T 12-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 Vc3S01_2316 25987f4191b2b02169b0d755047f5daf 444 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 3 439 34.926 T 12-10-2018 IPR023023 dNTP triphosphohydrolase, type 2 GO:0016793 Vc3S01_2316 25987f4191b2b02169b0d755047f5daf 444 SUPERFAMILY SSF109604 23 441 2.25E-79 T 12-10-2018 Vc3S01_2316 25987f4191b2b02169b0d755047f5daf 444 Pfam PF01966 HD domain 66 151 7.5E-8 T 12-10-2018 IPR006674 HD domain Vc3S01_2316 25987f4191b2b02169b0d755047f5daf 444 Pfam PF13286 Phosphohydrolase-associated domain 347 437 1.9E-26 T 12-10-2018 IPR026875 Phosphohydrolase-associated domain Vc3S01_2316 25987f4191b2b02169b0d755047f5daf 444 SMART SM00471 62 268 1.4E-7 T 12-10-2018 IPR003607 HD/PDEase domain Vc3S01_p20022 e169e6cfdfb68f85e3db5f84fa1e5d64 206 Pfam PF11393 Type-IV b secretion system, inner-membrane complex component 36 204 3.8E-10 T 12-10-2018 IPR021055 Type-IV b secretion system, inner-membrane complex component Vc3S01_2238 c616f2d5b88fbddaf0e84d8c077294de 225 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 24 221 1.2E-42 T 12-10-2018 IPR018635 Uncharacterised protein family UPF0319 Vc3S01_2238 c616f2d5b88fbddaf0e84d8c077294de 225 Hamap MF_00789 UPF0319 protein YccT [yccT]. 5 224 23.795 T 12-10-2018 IPR018635 Uncharacterised protein family UPF0319 Vc3S01_1859 07aae6d169c2e301b1276f7680acd37d 263 SUPERFAMILY SSF56300 16 251 1.32E-34 T 12-10-2018 Vc3S01_1859 07aae6d169c2e301b1276f7680acd37d 263 Gene3D G3DSA:3.60.21.10 4 261 9.1E-45 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like Vc3S01_1859 07aae6d169c2e301b1276f7680acd37d 263 Pfam PF00149 Calcineurin-like phosphoesterase 19 204 9.8E-11 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Vc3S01_A1037 7362dcbce77cc4d90cf6719d16f50c93 317 Gene3D G3DSA:3.60.10.10 2 310 7.7E-29 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Vc3S01_A1037 7362dcbce77cc4d90cf6719d16f50c93 317 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 47 306 2.5E-8 T 12-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase Vc3S01_A1037 7362dcbce77cc4d90cf6719d16f50c93 317 SUPERFAMILY SSF56219 6 314 1.7E-31 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Vc3S01_A1458 0799d12f9a5fec9de466533dbc725a9c 233 SUPERFAMILY SSF52343 100 231 3.54E-31 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Vc3S01_A1458 0799d12f9a5fec9de466533dbc725a9c 233 Pfam PF00175 Oxidoreductase NAD-binding domain 108 211 5.3E-15 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 Vc3S01_A1458 0799d12f9a5fec9de466533dbc725a9c 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 107 126 3.0E-13 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Vc3S01_A1458 0799d12f9a5fec9de466533dbc725a9c 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 28 40 3.0E-13 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Vc3S01_A1458 0799d12f9a5fec9de466533dbc725a9c 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 132 141 3.0E-13 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Vc3S01_A1458 0799d12f9a5fec9de466533dbc725a9c 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 197 205 3.0E-13 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Vc3S01_A1458 0799d12f9a5fec9de466533dbc725a9c 233 SUPERFAMILY SSF63380 3 97 1.97E-12 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Vc3S01_A1458 0799d12f9a5fec9de466533dbc725a9c 233 Gene3D G3DSA:2.40.30.10 1 98 8.6E-17 T 12-10-2018 Vc3S01_A1458 0799d12f9a5fec9de466533dbc725a9c 233 Gene3D G3DSA:3.40.50.80 99 233 3.6E-25 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Vc3S01_2802 2f5660a0e3d171c6694e98a2fd6a3765 762 SUPERFAMILY SSF101904 499 743 1.96E-52 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal Vc3S01_2802 2f5660a0e3d171c6694e98a2fd6a3765 762 Gene3D G3DSA:3.90.199.10 34 483 2.9E-180 T 12-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 Vc3S01_2802 2f5660a0e3d171c6694e98a2fd6a3765 762 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 600 636 0.051 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Vc3S01_2802 2f5660a0e3d171c6694e98a2fd6a3765 762 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 647 693 1.4E-7 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Vc3S01_2802 2f5660a0e3d171c6694e98a2fd6a3765 762 Gene3D G3DSA:2.120.10.90 502 740 1.1E-15 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal Vc3S01_2802 2f5660a0e3d171c6694e98a2fd6a3765 762 SUPERFAMILY SSF56719 33 485 3.4E-156 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Vc3S01_2802 2f5660a0e3d171c6694e98a2fd6a3765 762 Gene3D G3DSA:1.10.268.10 371 456 2.9E-180 T 12-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Vc3S01_2802 2f5660a0e3d171c6694e98a2fd6a3765 762 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 10 744 0.0 T 12-10-2018 Vc3S01_2802 2f5660a0e3d171c6694e98a2fd6a3765 762 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 34 470 6.0E-136 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Vc3S01_2802 2f5660a0e3d171c6694e98a2fd6a3765 762 Gene3D G3DSA:3.30.1360.40 240 333 2.9E-180 T 12-10-2018 Vc3S01_2802 2f5660a0e3d171c6694e98a2fd6a3765 762 SMART SM00434 13 463 6.7E-234 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Vc3S01_2802 2f5660a0e3d171c6694e98a2fd6a3765 762 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 6 745 33.886 T 12-10-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Vc3S01_0374 f1473a26ed1ce68108ec28744ec0da6c 579 Pfam PF15864 Protein glycosylation ligase 159 184 8.9E-11 T 12-10-2018 IPR031726 Protein glycosylation ligase domain Vc3S01_0374 f1473a26ed1ce68108ec28744ec0da6c 579 Pfam PF04932 O-Antigen ligase 206 353 2.6E-15 T 12-10-2018 IPR007016 O-antigen ligase-related Vc3S01_0374 f1473a26ed1ce68108ec28744ec0da6c 579 Pfam PF11846 Virulence factor membrane-bound polymerase, C-terminal 375 563 1.2E-64 T 12-10-2018 IPR021797 Virulence factor membrane-bound polymerase, C-terminal Vc3S01_A1265 357f17d2e371309a8a0d7e81661cfb9f 240 Pfam PF01925 Sulfite exporter TauE/SafE 11 231 3.4E-24 T 12-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 Vc3S01_1799 3658bce9f6385270560037c2686e5ad3 357 SUPERFAMILY SSF54593 5 341 2.13E-76 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Vc3S01_1799 3658bce9f6385270560037c2686e5ad3 357 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 6 143 5.5E-56 T 12-10-2018 Vc3S01_1799 3658bce9f6385270560037c2686e5ad3 357 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 12 354 9.0E-131 T 12-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 Vc3S01_1799 3658bce9f6385270560037c2686e5ad3 357 PIRSF PIRSF009283 1 355 9.2E-125 T 12-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 Vc3S01_1799 3658bce9f6385270560037c2686e5ad3 357 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 163 275 1.7E-13 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Vc3S01_1799 3658bce9f6385270560037c2686e5ad3 357 Gene3D G3DSA:3.10.180.10 3 155 7.5E-45 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Vc3S01_1799 3658bce9f6385270560037c2686e5ad3 357 Gene3D G3DSA:3.10.180.10 158 355 4.6E-69 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Vc3S01_A1146 35fa082af63bf1a7e16a6cd81be3ed10 443 Gene3D G3DSA:1.20.1250.20 7 208 1.6E-33 T 12-10-2018 Vc3S01_A1146 35fa082af63bf1a7e16a6cd81be3ed10 443 Gene3D G3DSA:1.20.1250.20 224 438 3.3E-38 T 12-10-2018 Vc3S01_A1146 35fa082af63bf1a7e16a6cd81be3ed10 443 SUPERFAMILY SSF103473 6 428 1.1E-56 T 12-10-2018 IPR036259 MFS transporter superfamily Vc3S01_A1146 35fa082af63bf1a7e16a6cd81be3ed10 443 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 14 404 4.7E-138 T 12-10-2018 Vc3S01_A1146 35fa082af63bf1a7e16a6cd81be3ed10 443 PIRSF PIRSF002808 1 438 8.0E-106 T 12-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 Vc3S01_A1146 35fa082af63bf1a7e16a6cd81be3ed10 443 Pfam PF07690 Major Facilitator Superfamily 13 374 2.6E-34 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Vc3S01_A1146 35fa082af63bf1a7e16a6cd81be3ed10 443 ProSitePatterns PS00942 glpT family of transporters signature. 134 150 - T 12-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 Vc3S01_2457 362bd3a553e6e5d40b6110f289a5243b 574 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 2 565 4.6E-247 T 12-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 Vc3S01_2457 362bd3a553e6e5d40b6110f289a5243b 574 SUPERFAMILY SSF47831 24 143 8.37E-33 T 12-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 Vc3S01_2457 362bd3a553e6e5d40b6110f289a5243b 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 5.3E-30 T 12-10-2018 Vc3S01_2457 362bd3a553e6e5d40b6110f289a5243b 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 500 512 5.3E-30 T 12-10-2018 Vc3S01_2457 362bd3a553e6e5d40b6110f289a5243b 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 5.3E-30 T 12-10-2018 Vc3S01_2457 362bd3a553e6e5d40b6110f289a5243b 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 5.3E-30 T 12-10-2018 Vc3S01_2457 362bd3a553e6e5d40b6110f289a5243b 574 Pfam PF00391 PEP-utilising enzyme, mobile domain 152 222 2.9E-20 T 12-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 Vc3S01_2457 362bd3a553e6e5d40b6110f289a5243b 574 PIRSF PIRSF000732 1 574 2.7E-218 T 12-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 Vc3S01_2457 362bd3a553e6e5d40b6110f289a5243b 574 Pfam PF05524 PEP-utilising enzyme, N-terminal 4 126 2.0E-32 T 12-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 Vc3S01_2457 362bd3a553e6e5d40b6110f289a5243b 574 Gene3D G3DSA:3.20.20.60 234 574 6.1E-125 T 12-10-2018 Vc3S01_2457 362bd3a553e6e5d40b6110f289a5243b 574 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 184 195 - T 12-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 Vc3S01_2457 362bd3a553e6e5d40b6110f289a5243b 574 SUPERFAMILY SSF51621 249 549 1.1E-109 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Vc3S01_2457 362bd3a553e6e5d40b6110f289a5243b 574 SUPERFAMILY SSF52009 125 243 1.96E-34 T 12-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 Vc3S01_2457 362bd3a553e6e5d40b6110f289a5243b 574 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 250 541 7.2E-124 T 12-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 Vc3S01_2457 362bd3a553e6e5d40b6110f289a5243b 574 Gene3D G3DSA:1.10.274.10 21 146 4.5E-80 T 12-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 Vc3S01_2457 362bd3a553e6e5d40b6110f289a5243b 574 Gene3D G3DSA:3.50.30.10 4 233 4.5E-80 T 12-10-2018 Vc3S01_A1736 9b19021f7c018af7541bd38d4fab63ba 128 Pfam PF00582 Universal stress protein family 3 125 7.6E-14 T 12-10-2018 IPR006016 UspA Vc3S01_A1736 9b19021f7c018af7541bd38d4fab63ba 128 SUPERFAMILY SSF52402 3 125 2.09E-23 T 12-10-2018 Vc3S01_A1736 9b19021f7c018af7541bd38d4fab63ba 128 PIRSF PIRSF006276 1 128 1.5E-35 T 12-10-2018 IPR006015 Universal stress protein A Vc3S01_A1736 9b19021f7c018af7541bd38d4fab63ba 128 Gene3D G3DSA:3.40.50.620 2 128 2.4E-29 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Vc3S01_2433 e3f071825e85e49190e4029494699ac0 244 Pfam PF07556 Protein of unknown function (DUF1538) 21 242 3.9E-72 T 12-10-2018 IPR011435 Protein of unknown function DUF1538 Vc3S01_0409 048b23255214224d2a95078c54a66294 174 Pfam PF04751 Protein of unknown function (DUF615) 18 168 3.4E-56 T 12-10-2018 IPR006839 Ribosome-associated, YjgA Vc3S01_0409 048b23255214224d2a95078c54a66294 174 Gene3D G3DSA:1.10.60.30 103 174 5.1E-24 T 12-10-2018 Vc3S01_0409 048b23255214224d2a95078c54a66294 174 Gene3D G3DSA:1.10.60.30 28 102 3.4E-26 T 12-10-2018 Vc3S01_0409 048b23255214224d2a95078c54a66294 174 SUPERFAMILY SSF158710 28 169 2.62E-51 T 12-10-2018 IPR023153 PSPTO4464-like domain superfamily Vc3S01_0409 048b23255214224d2a95078c54a66294 174 PIRSF PIRSF016183 1 174 6.5E-72 T 12-10-2018 IPR006839 Ribosome-associated, YjgA Vc3S01_0409 048b23255214224d2a95078c54a66294 174 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 10 172 22.879 T 12-10-2018 IPR006839 Ribosome-associated, YjgA Vc3S01_A1221 6b824f88baf449c0c94628f6d2a8225e 154 SUPERFAMILY SSF160719 33 140 1.18E-7 T 12-10-2018 Vc3S01_A1221 6b824f88baf449c0c94628f6d2a8225e 154 Pfam PF04965 Gene 25-like lysozyme 31 127 1.3E-16 T 12-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD Vc3S01_A1221 6b824f88baf449c0c94628f6d2a8225e 154 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 5 144 2.3E-29 T 12-10-2018 IPR017737 Type VI secretion system, lysozyme-related protein Vc3S01_1246 61f3900217e02262267a292778dad540 222 Pfam PF11201 Protein of unknown function (DUF2982) 67 216 6.8E-60 T 12-10-2018 IPR021367 Protein of unknown function DUF2982 Vc3S01_A1663 4d7fc036a89c3979be9432d5fb776bf7 278 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 7 276 66.638 T 12-10-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein Vc3S01_A1663 4d7fc036a89c3979be9432d5fb776bf7 278 Pfam PF03618 Kinase/pyrophosphorylase 10 267 6.6E-74 T 12-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 Vc3S01_0502 4f629a446fd98167961e2d29daab111a 68 Pfam PF06526 Protein of unknown function (DUF1107) 1 63 6.4E-29 T 12-10-2018 IPR009491 Protein of unknown function DUF1107 Vc3S01_0502 4f629a446fd98167961e2d29daab111a 68 Gene3D G3DSA:3.30.1910.10 1 63 1.7E-29 T 12-10-2018 Vc3S01_0502 4f629a446fd98167961e2d29daab111a 68 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 63 1.0E-28 T 12-10-2018 IPR009491 Protein of unknown function DUF1107 Vc3S01_A1269 0544b809f4f28460bfb104011d7a5bc8 202 SUPERFAMILY SSF46894 132 190 2.48E-15 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Vc3S01_A1269 0544b809f4f28460bfb104011d7a5bc8 202 Pfam PF00196 Bacterial regulatory proteins, luxR family 137 190 2.8E-16 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_A1269 0544b809f4f28460bfb104011d7a5bc8 202 SMART SM00448 2 115 5.9E-16 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A1269 0544b809f4f28460bfb104011d7a5bc8 202 ProSitePatterns PS00622 LuxR-type HTH domain signature. 152 179 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_A1269 0544b809f4f28460bfb104011d7a5bc8 202 Pfam PF00072 Response regulator receiver domain 4 115 6.3E-21 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A1269 0544b809f4f28460bfb104011d7a5bc8 202 SMART SM00421 135 192 1.2E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_A1269 0544b809f4f28460bfb104011d7a5bc8 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 180 2.1E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_A1269 0544b809f4f28460bfb104011d7a5bc8 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 138 152 2.1E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_A1269 0544b809f4f28460bfb104011d7a5bc8 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 168 2.1E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Vc3S01_A1269 0544b809f4f28460bfb104011d7a5bc8 202 Gene3D G3DSA:1.10.10.10 127 195 1.2E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A1269 0544b809f4f28460bfb104011d7a5bc8 202 SUPERFAMILY SSF52172 2 127 3.42E-22 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_A1269 0544b809f4f28460bfb104011d7a5bc8 202 Gene3D G3DSA:3.40.50.2300 1 126 6.6E-21 T 12-10-2018 Vc3S01_A1920 d1181c8a232de72c6d7c7278c5537491 200 Gene3D G3DSA:1.10.10.60 1 58 1.7E-22 T 12-10-2018 Vc3S01_A1920 d1181c8a232de72c6d7c7278c5537491 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 4.7E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Vc3S01_A1920 d1181c8a232de72c6d7c7278c5537491 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 4.7E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Vc3S01_A1920 d1181c8a232de72c6d7c7278c5537491 200 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 146 198 1.3E-9 T 12-10-2018 IPR039536 Transcriptional regulator TetR, C-terminal, Proteobacteria type Vc3S01_A1920 d1181c8a232de72c6d7c7278c5537491 200 SUPERFAMILY SSF46689 2 78 4.37E-19 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_A1920 d1181c8a232de72c6d7c7278c5537491 200 Gene3D G3DSA:1.10.357.10 63 200 5.1E-26 T 12-10-2018 Vc3S01_A1920 d1181c8a232de72c6d7c7278c5537491 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 58 2.0E-16 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Vc3S01_1400 a97af588aae546e3b686d814ce68bf3d 207 Pfam PF03575 Peptidase family S51 6 182 2.8E-34 T 12-10-2018 IPR005320 Peptidase S51 GO:0006508|GO:0008236 Vc3S01_1400 a97af588aae546e3b686d814ce68bf3d 207 SUPERFAMILY SSF52317 11 182 8.88E-23 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Vc3S01_1400 a97af588aae546e3b686d814ce68bf3d 207 Gene3D G3DSA:3.40.50.880 5 203 6.6E-34 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Vc3S01_0121 5a6ce24d5fb4cf447c2757d07032ef03 199 SUPERFAMILY SSF53335 19 196 7.68E-55 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Vc3S01_0121 5a6ce24d5fb4cf447c2757d07032ef03 199 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 131 137 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Vc3S01_0121 5a6ce24d5fb4cf447c2757d07032ef03 199 Pfam PF03602 Conserved hypothetical protein 95 19 195 5.5E-62 T 12-10-2018 Vc3S01_0121 5a6ce24d5fb4cf447c2757d07032ef03 199 PIRSF PIRSF004553 18 198 2.6E-55 T 12-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 Vc3S01_0121 5a6ce24d5fb4cf447c2757d07032ef03 199 Gene3D G3DSA:3.40.50.150 6 198 1.7E-63 T 12-10-2018 Vc3S01_0121 5a6ce24d5fb4cf447c2757d07032ef03 199 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 17 196 3.4E-60 T 12-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 Vc3S01_A0517 576c39b807dd935716c094cda8a9df1e 478 SMART SM01060 6 390 5.8E-290 T 12-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Vc3S01_A0517 576c39b807dd935716c094cda8a9df1e 478 PRINTS PR00067 Catalase signature 19 42 1.1E-72 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Vc3S01_A0517 576c39b807dd935716c094cda8a9df1e 478 PRINTS PR00067 Catalase signature 82 100 1.1E-72 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Vc3S01_A0517 576c39b807dd935716c094cda8a9df1e 478 PRINTS PR00067 Catalase signature 287 314 1.1E-72 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Vc3S01_A0517 576c39b807dd935716c094cda8a9df1e 478 PRINTS PR00067 Catalase signature 103 120 1.1E-72 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Vc3S01_A0517 576c39b807dd935716c094cda8a9df1e 478 PRINTS PR00067 Catalase signature 319 345 1.1E-72 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Vc3S01_A0517 576c39b807dd935716c094cda8a9df1e 478 PRINTS PR00067 Catalase signature 122 140 1.1E-72 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Vc3S01_A0517 576c39b807dd935716c094cda8a9df1e 478 ProSitePatterns PS00438 Catalase proximal active site signature. 42 58 - T 12-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Vc3S01_A0517 576c39b807dd935716c094cda8a9df1e 478 Gene3D G3DSA:2.40.180.10 1 478 1.0E-231 T 12-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 Vc3S01_A0517 576c39b807dd935716c094cda8a9df1e 478 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 332 340 - T 12-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Vc3S01_A0517 576c39b807dd935716c094cda8a9df1e 478 Pfam PF00199 Catalase 6 386 1.8E-191 T 12-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Vc3S01_A0517 576c39b807dd935716c094cda8a9df1e 478 PIRSF PIRSF038928 1 478 2.4E-223 T 12-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Vc3S01_A0517 576c39b807dd935716c094cda8a9df1e 478 SUPERFAMILY SSF56634 4 477 2.88E-216 T 12-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Vc3S01_A0517 576c39b807dd935716c094cda8a9df1e 478 Pfam PF06628 Catalase-related immune-responsive 415 473 1.8E-21 T 12-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Vc3S01_p30056 57fdee76dc01a80b9119d1d0faeb7a06 2553 Pfam PF03538 Salmonella virulence plasmid 28.1kDa A protein 17 313 8.7E-31 T 12-10-2018 IPR018003 Insecticidal toxin complex/plasmid virulence protein Vc3S01_2453 8b05a98142406b498f801c5c0651f57e 323 SMART SM00771 185 315 8.1E-70 T 12-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 Vc3S01_2453 8b05a98142406b498f801c5c0651f57e 323 Hamap MF_00509 Cell division protein ZipA [zipA]. 2 317 22.559 T 12-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 Vc3S01_2453 8b05a98142406b498f801c5c0651f57e 323 Gene3D G3DSA:3.30.1400.10 184 323 3.4E-49 T 12-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 Vc3S01_2453 8b05a98142406b498f801c5c0651f57e 323 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 188 323 3.0E-73 T 12-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 Vc3S01_2453 8b05a98142406b498f801c5c0651f57e 323 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 187 314 7.1E-46 T 12-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 Vc3S01_2453 8b05a98142406b498f801c5c0651f57e 323 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 3 315 1.7E-87 T 12-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 Vc3S01_2453 8b05a98142406b498f801c5c0651f57e 323 SUPERFAMILY SSF64383 187 319 8.76E-49 T 12-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 Vc3S01_A0749 748e3207b75ce51b5da89d3630a473c7 571 SUPERFAMILY SSF58104 261 568 1.83E-69 T 12-10-2018 Vc3S01_A0749 748e3207b75ce51b5da89d3630a473c7 571 SMART SM00283 306 567 1.2E-58 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Vc3S01_A0749 748e3207b75ce51b5da89d3630a473c7 571 SMART SM00304 238 291 0.0044 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Vc3S01_A0749 748e3207b75ce51b5da89d3630a473c7 571 Gene3D G3DSA:1.10.287.950 237 569 2.8E-65 T 12-10-2018 Vc3S01_A0749 748e3207b75ce51b5da89d3630a473c7 571 SMART SM01358 7 253 6.2E-4 T 12-10-2018 IPR032255 Helical bimodular sensor domain Vc3S01_A0749 748e3207b75ce51b5da89d3630a473c7 571 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 353 533 5.7E-39 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Vc3S01_p10036 f87a8e6fd8f67bb7e7a5cbfdd53c7d00 154 Gene3D G3DSA:1.10.472.120 6 154 5.4E-45 T 12-10-2018 Vc3S01_p10036 f87a8e6fd8f67bb7e7a5cbfdd53c7d00 154 Pfam PF03230 Antirestriction protein 57 153 2.7E-20 T 12-10-2018 IPR004914 Antirestriction protein Vc3S01_p10036 f87a8e6fd8f67bb7e7a5cbfdd53c7d00 154 ProDom PD012854 PLASMID KLCA ANTIRESTRICTION YFJX YCIB ARDB STABLE YFEB Z1216 C0275 57 154 6.0E-10 T 12-10-2018 IPR004914 Antirestriction protein Vc3S01_A1328 554b2b49f08d5ac4fb72b8c13191dc1a 326 Pfam PF12710 haloacid dehalogenase-like hydrolase 63 267 8.9E-22 T 12-10-2018 Vc3S01_A1328 554b2b49f08d5ac4fb72b8c13191dc1a 326 SUPERFAMILY SSF56784 60 308 6.34E-25 T 12-10-2018 IPR036412 HAD-like superfamily Vc3S01_A1328 554b2b49f08d5ac4fb72b8c13191dc1a 326 Gene3D G3DSA:3.40.50.1000 121 321 1.3E-42 T 12-10-2018 IPR023214 HAD superfamily Vc3S01_A0118 6b20a654b93641a9f852be8c5dc5fef8 265 Gene3D G3DSA:3.40.50.1000 9 260 4.1E-79 T 12-10-2018 IPR023214 HAD superfamily Vc3S01_A0118 6b20a654b93641a9f852be8c5dc5fef8 265 Gene3D G3DSA:3.30.1240.10 85 190 4.1E-79 T 12-10-2018 Vc3S01_A0118 6b20a654b93641a9f852be8c5dc5fef8 265 Pfam PF08282 haloacid dehalogenase-like hydrolase 9 260 2.5E-60 T 12-10-2018 Vc3S01_A0118 6b20a654b93641a9f852be8c5dc5fef8 265 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 9 260 3.1E-52 T 12-10-2018 IPR000150 Cof family GO:0016787 Vc3S01_A0118 6b20a654b93641a9f852be8c5dc5fef8 265 SUPERFAMILY SSF56784 4 264 6.85E-68 T 12-10-2018 IPR036412 HAD-like superfamily Vc3S01_2722 e756a66c8f164fff26f80247f1133896 344 SUPERFAMILY SSF51430 1 343 3.27E-110 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Vc3S01_2722 e756a66c8f164fff26f80247f1133896 344 Gene3D G3DSA:3.20.20.100 1 344 7.0E-136 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Vc3S01_2722 e756a66c8f164fff26f80247f1133896 344 Pfam PF00248 Aldo/keto reductase family 15 335 1.5E-75 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain Vc3S01_A1823 b52f4e6fb301c58ece0cd5822bdeafa8 254 Pfam PF00175 Oxidoreductase NAD-binding domain 118 229 1.1E-19 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 Vc3S01_A1823 b52f4e6fb301c58ece0cd5822bdeafa8 254 SUPERFAMILY SSF63380 10 102 1.67E-17 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Vc3S01_A1823 b52f4e6fb301c58ece0cd5822bdeafa8 254 SUPERFAMILY SSF52343 111 253 5.5E-36 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Vc3S01_A1823 b52f4e6fb301c58ece0cd5822bdeafa8 254 Pfam PF00970 Oxidoreductase FAD-binding domain 22 95 1.8E-6 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 Vc3S01_A1823 b52f4e6fb301c58ece0cd5822bdeafa8 254 Gene3D G3DSA:2.40.30.10 2 102 5.5E-23 T 12-10-2018 Vc3S01_A1823 b52f4e6fb301c58ece0cd5822bdeafa8 254 Gene3D G3DSA:3.40.50.80 104 254 8.1E-40 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Vc3S01_A0610 67ba812008ff5dd0b51c65e641e232c7 218 Gene3D G3DSA:3.90.870.10 6 218 9.6E-88 T 12-10-2018 Vc3S01_A0610 67ba812008ff5dd0b51c65e641e232c7 218 SUPERFAMILY SSF55821 10 213 2.17E-81 T 12-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Vc3S01_A0610 67ba812008ff5dd0b51c65e641e232c7 218 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 14 210 4.6E-76 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Vc3S01_A0610 67ba812008ff5dd0b51c65e641e232c7 218 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 12 214 42.368 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Vc3S01_A0610 67ba812008ff5dd0b51c65e641e232c7 218 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 18 209 2.2E-78 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Vc3S01_2781 b2743ddcd3bd916b519ea5a3c9ab68ba 454 Gene3D G3DSA:3.40.1390.10 1 80 5.8E-29 T 12-10-2018 Vc3S01_2781 b2743ddcd3bd916b519ea5a3c9ab68ba 454 SUPERFAMILY SSF53244 316 450 3.05E-34 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Vc3S01_2781 b2743ddcd3bd916b519ea5a3c9ab68ba 454 Pfam PF02875 Mur ligase family, glutamate ligase domain 316 393 1.8E-12 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Vc3S01_2781 b2743ddcd3bd916b519ea5a3c9ab68ba 454 Gene3D G3DSA:3.40.1190.10 81 314 5.1E-75 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Vc3S01_2781 b2743ddcd3bd916b519ea5a3c9ab68ba 454 SUPERFAMILY SSF53623 100 313 3.92E-55 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Vc3S01_2781 b2743ddcd3bd916b519ea5a3c9ab68ba 454 SUPERFAMILY SSF63418 1 96 1.96E-26 T 12-10-2018 IPR035911 MurE/MurF, N-terminal Vc3S01_2781 b2743ddcd3bd916b519ea5a3c9ab68ba 454 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 451 33.761 T 12-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Vc3S01_2781 b2743ddcd3bd916b519ea5a3c9ab68ba 454 Pfam PF01225 Mur ligase family, catalytic domain 24 79 7.8E-9 T 12-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 Vc3S01_2781 b2743ddcd3bd916b519ea5a3c9ab68ba 454 Pfam PF08245 Mur ligase middle domain 105 295 1.7E-48 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Vc3S01_2781 b2743ddcd3bd916b519ea5a3c9ab68ba 454 Gene3D G3DSA:3.90.190.20 315 453 8.0E-37 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Vc3S01_2781 b2743ddcd3bd916b519ea5a3c9ab68ba 454 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 29 450 1.4E-140 T 12-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Vc3S01_1273 0109e2c8f643f734f5897245796c3490 460 Pfam PF00563 EAL domain 247 456 3.3E-42 T 12-10-2018 IPR001633 EAL domain Vc3S01_1273 0109e2c8f643f734f5897245796c3490 460 SUPERFAMILY SSF141868 245 456 1.31E-47 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_1273 0109e2c8f643f734f5897245796c3490 460 Gene3D G3DSA:3.20.20.450 233 458 3.6E-46 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_1273 0109e2c8f643f734f5897245796c3490 460 SMART SM00052 232 460 1.3E-16 T 12-10-2018 IPR001633 EAL domain Vc3S01_1094 780f646d2e250d06e923253b14e1f5d9 245 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 188 4.2E-5 T 12-10-2018 Vc3S01_1094 780f646d2e250d06e923253b14e1f5d9 245 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 9 243 4.1E-100 T 12-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Vc3S01_1094 780f646d2e250d06e923253b14e1f5d9 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 8.6E-53 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_1094 780f646d2e250d06e923253b14e1f5d9 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 8.6E-53 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_1094 780f646d2e250d06e923253b14e1f5d9 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 8.6E-53 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_1094 780f646d2e250d06e923253b14e1f5d9 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 8.6E-53 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_1094 780f646d2e250d06e923253b14e1f5d9 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 8.6E-53 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_1094 780f646d2e250d06e923253b14e1f5d9 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 8.6E-53 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_1094 780f646d2e250d06e923253b14e1f5d9 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Vc3S01_1094 780f646d2e250d06e923253b14e1f5d9 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 6.8E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_1094 780f646d2e250d06e923253b14e1f5d9 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 6.8E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_1094 780f646d2e250d06e923253b14e1f5d9 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 6.8E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_1094 780f646d2e250d06e923253b14e1f5d9 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 242 1.1E-66 T 12-10-2018 Vc3S01_1094 780f646d2e250d06e923253b14e1f5d9 245 Gene3D G3DSA:3.40.50.720 1 245 1.7E-88 T 12-10-2018 Vc3S01_1094 780f646d2e250d06e923253b14e1f5d9 245 SUPERFAMILY SSF51735 5 244 5.44E-87 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_1192 00a7e87b9690eccb8b5c26d8ca6dc4ab 131 Pfam PF03061 Thioesterase superfamily 26 98 1.5E-20 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 Vc3S01_1192 00a7e87b9690eccb8b5c26d8ca6dc4ab 131 SUPERFAMILY SSF54637 9 130 3.39E-39 T 12-10-2018 IPR029069 HotDog domain superfamily Vc3S01_1192 00a7e87b9690eccb8b5c26d8ca6dc4ab 131 Gene3D G3DSA:3.10.129.10 2 131 2.0E-40 T 12-10-2018 Vc3S01_A0218 abd252923e4e086f6d91d054e92577e5 209 Pfam PF16357 Putative PepSY_TM-like 10 209 1.8E-64 T 12-10-2018 IPR032307 Putative PepSY TM-like protein Vc3S01_A0565 0d5edb3c5d010e5cbeb56d8954ffb1d3 167 Gene3D G3DSA:3.40.1570.10 1 167 2.0E-59 T 12-10-2018 Vc3S01_A0565 0d5edb3c5d010e5cbeb56d8954ffb1d3 167 PIRSF PIRSF030840 1 167 3.6E-63 T 12-10-2018 IPR010413 Heme utilization carrier protein HutX-like Vc3S01_A0565 0d5edb3c5d010e5cbeb56d8954ffb1d3 167 SUPERFAMILY SSF144064 1 163 2.75E-55 T 12-10-2018 Vc3S01_A0565 0d5edb3c5d010e5cbeb56d8954ffb1d3 167 Pfam PF06228 Haem utilisation ChuX/HutX 24 160 4.9E-32 T 12-10-2018 IPR010413 Heme utilization carrier protein HutX-like Vc3S01_A0565 0d5edb3c5d010e5cbeb56d8954ffb1d3 167 TIGRFAM TIGR04108 HutX: putative heme utilization carrier protein HutX 8 161 1.6E-62 T 12-10-2018 IPR010413 Heme utilization carrier protein HutX-like Vc3S01_0596 aeebb1966c5586c0ccfc2c2c38fd5492 802 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 296 728 2.5E-209 T 12-10-2018 IPR033432 Glycosyl hydrolase 36, catalytic domain Vc3S01_0596 aeebb1966c5586c0ccfc2c2c38fd5492 802 Gene3D G3DSA:1.50.10.10 311 720 1.3E-134 T 12-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 Vc3S01_0596 aeebb1966c5586c0ccfc2c2c38fd5492 802 Pfam PF06165 Glycosyltransferase family 36 21 267 3.0E-84 T 12-10-2018 IPR010383 Glycosyl hydrolase 94 Vc3S01_0596 aeebb1966c5586c0ccfc2c2c38fd5492 802 SUPERFAMILY SSF74650 1 269 2.17E-82 T 12-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Vc3S01_0596 aeebb1966c5586c0ccfc2c2c38fd5492 802 Gene3D G3DSA:2.60.420.10 721 801 9.9E-30 T 12-10-2018 Vc3S01_0596 aeebb1966c5586c0ccfc2c2c38fd5492 802 SUPERFAMILY SSF48208 274 801 9.53E-109 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Vc3S01_0596 aeebb1966c5586c0ccfc2c2c38fd5492 802 Gene3D G3DSA:2.70.98.40 1 302 6.1E-116 T 12-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily Vc3S01_0596 aeebb1966c5586c0ccfc2c2c38fd5492 802 SMART SM01068 1 63 2.3E-20 T 12-10-2018 IPR009342 Putative carbohydrate binding domain Vc3S01_2185 4cf995e37c45a8708b732eceb40577af 251 Pfam PF13174 Tetratricopeptide repeat 208 240 1.9E-6 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_2185 4cf995e37c45a8708b732eceb40577af 251 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 5 251 17.347 T 12-10-2018 IPR034706 Cell division coordinator CpoB GO:0051301 Vc3S01_2185 4cf995e37c45a8708b732eceb40577af 251 Pfam PF13432 Tetratricopeptide repeat 145 196 4.5E-7 T 12-10-2018 Vc3S01_2185 4cf995e37c45a8708b732eceb40577af 251 Gene3D G3DSA:1.20.5.110 40 119 1.3E-21 T 12-10-2018 Vc3S01_2185 4cf995e37c45a8708b732eceb40577af 251 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 134 249 5.8E-38 T 12-10-2018 IPR014162 Cell division coordinator CpoB, C-terminal Vc3S01_2185 4cf995e37c45a8708b732eceb40577af 251 Gene3D G3DSA:1.25.40.10 133 251 7.1E-24 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_2185 4cf995e37c45a8708b732eceb40577af 251 Pfam PF16331 TolA binding protein trimerisation 43 114 4.6E-24 T 12-10-2018 IPR032519 YbgF, trimerisation domain GO:0070206 Vc3S01_2185 4cf995e37c45a8708b732eceb40577af 251 SUPERFAMILY SSF48452 142 244 8.97E-13 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_2185 4cf995e37c45a8708b732eceb40577af 251 SMART SM00028 171 204 22.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_2185 4cf995e37c45a8708b732eceb40577af 251 SMART SM00028 207 240 0.91 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_A1709 319bc0bfb9d2aa9fcec2409b2a9044e8 187 SUPERFAMILY SSF46689 3 54 4.67E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_A1709 319bc0bfb9d2aa9fcec2409b2a9044e8 187 Gene3D G3DSA:1.10.357.10 2 186 6.9E-51 T 12-10-2018 Vc3S01_A1709 319bc0bfb9d2aa9fcec2409b2a9044e8 187 SUPERFAMILY SSF48498 61 176 6.67E-5 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Vc3S01_A1709 319bc0bfb9d2aa9fcec2409b2a9044e8 187 Pfam PF00440 Bacterial regulatory proteins, tetR family 3 34 5.2E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Vc3S01_2401 449fab16b484b9081ffb516829497693 70 Gene3D G3DSA:1.20.1300.10 1 70 8.5E-19 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Vc3S01_2401 449fab16b484b9081ffb516829497693 70 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 26 39 - T 12-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Vc3S01_2401 449fab16b484b9081ffb516829497693 70 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 5 67 7.5E-18 T 12-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Vc3S01_2401 449fab16b484b9081ffb516829497693 70 SUPERFAMILY SSF81343 4 70 2.45E-16 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Vc3S01_2401 449fab16b484b9081ffb516829497693 70 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 7 64 3.6E-12 T 12-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Vc3S01_2956 5614c5496e9e6b72787a4782a1ab6f56 145 Pfam PF05656 Protein of unknown function (DUF805) 13 144 3.4E-20 T 12-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 Vc3S01_0492 e35fda5cae2684f438ef1fdfa6b024e2 194 Pfam PF01810 LysE type translocator 2 186 1.0E-41 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Vc3S01_1471 dd420096547bc9735d6be1398e5c07b8 209 Pfam PF01810 LysE type translocator 15 205 6.2E-38 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Vc3S01_1471 dd420096547bc9735d6be1398e5c07b8 209 PIRSF PIRSF006324 1 209 9.2E-55 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Vc3S01_1049 35841a0bae0f6496083941da0ab0e620 114 Pfam PF01627 Hpt domain 26 102 2.8E-11 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Vc3S01_1049 35841a0bae0f6496083941da0ab0e620 114 Gene3D G3DSA:1.20.120.160 1 114 4.8E-30 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 Vc3S01_1049 35841a0bae0f6496083941da0ab0e620 114 SUPERFAMILY SSF47226 2 112 1.57E-25 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 Vc3S01_0958 0edc2d0f2ec7b1f758fa42dd5e8f7487 654 Gene3D G3DSA:3.40.50.140 2 157 5.0E-61 T 12-10-2018 Vc3S01_0958 0edc2d0f2ec7b1f758fa42dd5e8f7487 654 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 526 540 3.9E-26 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Vc3S01_0958 0edc2d0f2ec7b1f758fa42dd5e8f7487 654 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 99 112 3.9E-26 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Vc3S01_0958 0edc2d0f2ec7b1f758fa42dd5e8f7487 654 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 327 336 3.9E-26 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Vc3S01_0958 0edc2d0f2ec7b1f758fa42dd5e8f7487 654 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 408 424 3.9E-26 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Vc3S01_0958 0edc2d0f2ec7b1f758fa42dd5e8f7487 654 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 194 212 3.9E-26 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Vc3S01_0958 0edc2d0f2ec7b1f758fa42dd5e8f7487 654 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 628 1.1E-237 T 12-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 Vc3S01_0958 0edc2d0f2ec7b1f758fa42dd5e8f7487 654 Pfam PF01751 Toprim domain 4 132 2.0E-16 T 12-10-2018 IPR006171 TOPRIM domain Vc3S01_0958 0edc2d0f2ec7b1f758fa42dd5e8f7487 654 Gene3D G3DSA:2.70.20.10 218 493 9.2E-166 T 12-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 Vc3S01_0958 0edc2d0f2ec7b1f758fa42dd5e8f7487 654 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 321 336 - T 12-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 Vc3S01_0958 0edc2d0f2ec7b1f758fa42dd5e8f7487 654 Pfam PF01131 DNA topoisomerase 159 598 5.8E-116 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Vc3S01_0958 0edc2d0f2ec7b1f758fa42dd5e8f7487 654 SMART SM00493 2 125 6.5E-28 T 12-10-2018 IPR006171 TOPRIM domain Vc3S01_0958 0edc2d0f2ec7b1f758fa42dd5e8f7487 654 Hamap MF_00953 DNA topoisomerase 3 [topB]. 2 646 64.322 T 12-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 Vc3S01_0958 0edc2d0f2ec7b1f758fa42dd5e8f7487 654 SMART SM00437 284 563 4.3E-89 T 12-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 Vc3S01_0958 0edc2d0f2ec7b1f758fa42dd5e8f7487 654 SUPERFAMILY SSF56712 3 612 1.31E-184 T 12-10-2018 IPR023405 DNA topoisomerase, type IA, core domain Vc3S01_0958 0edc2d0f2ec7b1f758fa42dd5e8f7487 654 Gene3D G3DSA:1.10.290.10 293 422 9.2E-166 T 12-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 Vc3S01_0958 0edc2d0f2ec7b1f758fa42dd5e8f7487 654 SMART SM00436 129 224 1.1E-30 T 12-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 Vc3S01_0958 0edc2d0f2ec7b1f758fa42dd5e8f7487 654 Gene3D G3DSA:1.10.460.10 163 605 9.2E-166 T 12-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 Vc3S01_A0690 4018560e1cdb6d3a872be6628ea31d4f 325 PIRSF PIRSF016624 3 321 2.4E-19 T 12-10-2018 IPR012106 Protease, Mu phage/prophage I type Vc3S01_A0690 4018560e1cdb6d3a872be6628ea31d4f 325 Pfam PF10123 Mu-like prophage I protein 33 314 3.0E-51 T 12-10-2018 IPR012106 Protease, Mu phage/prophage I type Vc3S01_A1044 fb1b7f0f6f73c99b596df377eac52707 212 Pfam PF07947 YhhN family 24 204 7.5E-38 T 12-10-2018 IPR012506 YhhN-like GO:0016021 Vc3S01_0600 5c65e2fc0a21e4138b45854c344f3d29 331 Pfam PF00005 ABC transporter 35 192 1.7E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_0600 5c65e2fc0a21e4138b45854c344f3d29 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 243 308 5.1E-17 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Vc3S01_0600 5c65e2fc0a21e4138b45854c344f3d29 331 Gene3D G3DSA:3.40.50.300 8 331 9.7E-78 T 12-10-2018 Vc3S01_0600 5c65e2fc0a21e4138b45854c344f3d29 331 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_0600 5c65e2fc0a21e4138b45854c344f3d29 331 SMART SM00382 43 241 6.8E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_0600 5c65e2fc0a21e4138b45854c344f3d29 331 SUPERFAMILY SSF52540 9 262 4.5E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0600 5c65e2fc0a21e4138b45854c344f3d29 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 241 328 1.3E-22 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Vc3S01_A0645 48f2a5705857ef0189bd1a5c192696f8 218 Gene3D G3DSA:2.30.110.10 2 217 4.7E-61 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Vc3S01_A0645 48f2a5705857ef0189bd1a5c192696f8 218 SUPERFAMILY SSF50475 2 184 8.64E-53 T 12-10-2018 Vc3S01_A0645 48f2a5705857ef0189bd1a5c192696f8 218 Pfam PF12900 Pyridoxamine 5'-phosphate oxidase 20 162 5.9E-40 T 12-10-2018 IPR024747 Pyridoxamine 5'-phosphate oxidase-related Vc3S01_0244 b8ecc137fe337aaf7a8f9ba29e2c5fb0 285 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 48 283 3.7E-87 T 12-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 Vc3S01_0244 b8ecc137fe337aaf7a8f9ba29e2c5fb0 285 Pfam PF02666 Phosphatidylserine decarboxylase 62 280 1.7E-62 T 12-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 Vc3S01_0244 b8ecc137fe337aaf7a8f9ba29e2c5fb0 285 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 9 285 49.786 T 12-10-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 Vc3S01_1834 3d338cfd24572e184b625ed240add6d3 193 Pfam PF07209 Protein of unknown function (DUF1415) 17 185 5.0E-66 T 12-10-2018 IPR009858 Protein of unknown function DUF1415 Vc3S01_A0512 f3c71bf5c5de930dc23f3470893374fc 99 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 94 3.1E-18 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 Vc3S01_A0512 f3c71bf5c5de930dc23f3470893374fc 99 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 4 86 6.9E-32 T 12-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 Vc3S01_A0512 f3c71bf5c5de930dc23f3470893374fc 99 SUPERFAMILY SSF52794 2 94 2.44E-33 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 Vc3S01_A0512 f3c71bf5c5de930dc23f3470893374fc 99 Gene3D G3DSA:3.40.50.2300 1 98 1.3E-37 T 12-10-2018 Vc3S01_A0161 a04990a5ae46c4e5d6c73b81c58ea145 163 SUPERFAMILY SSF54593 1 155 2.28E-24 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Vc3S01_A0161 a04990a5ae46c4e5d6c73b81c58ea145 163 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 12-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 Vc3S01_A0161 a04990a5ae46c4e5d6c73b81c58ea145 163 Gene3D G3DSA:3.10.180.10 1 161 9.4E-24 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Vc3S01_A0161 a04990a5ae46c4e5d6c73b81c58ea145 163 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 149 2.0E-12 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Vc3S01_2998 9884fe974728174151bd3a8a4a8f6073 317 Pfam PF04230 Polysaccharide pyruvyl transferase 43 286 2.4E-23 T 12-10-2018 IPR007345 Polysaccharide pyruvyl transferase Vc3S01_0304 a252e2d07614aa8a83b1ebbf5f806a03 877 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 535 547 - T 12-10-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Vc3S01_0304 a252e2d07614aa8a83b1ebbf5f806a03 877 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 134 145 - T 12-10-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Vc3S01_0304 a252e2d07614aa8a83b1ebbf5f806a03 877 SUPERFAMILY SSF51621 6 877 0.0 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Vc3S01_0304 a252e2d07614aa8a83b1ebbf5f806a03 877 Gene3D G3DSA:1.20.1440.90 302 387 1.1E-23 T 12-10-2018 Vc3S01_0304 a252e2d07614aa8a83b1ebbf5f806a03 877 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 1 877 17.964 T 12-10-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Vc3S01_0304 a252e2d07614aa8a83b1ebbf5f806a03 877 Pfam PF00311 Phosphoenolpyruvate carboxylase 129 877 1.3E-288 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Vc3S01_0304 a252e2d07614aa8a83b1ebbf5f806a03 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 245 260 1.9E-67 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Vc3S01_0304 a252e2d07614aa8a83b1ebbf5f806a03 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 186 202 1.9E-67 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Vc3S01_0304 a252e2d07614aa8a83b1ebbf5f806a03 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 707 733 1.9E-67 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Vc3S01_0304 a252e2d07614aa8a83b1ebbf5f806a03 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 533 553 1.9E-67 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Vc3S01_0304 a252e2d07614aa8a83b1ebbf5f806a03 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 575 604 1.9E-67 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Vc3S01_0304 a252e2d07614aa8a83b1ebbf5f806a03 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 133 146 1.9E-67 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Vc3S01_0304 a252e2d07614aa8a83b1ebbf5f806a03 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 384 404 1.9E-67 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Vc3S01_A0054 ad05aebd378830ab6283b1c9187ddf99 335 SUPERFAMILY SSF103481 37 135 3.4E-7 T 12-10-2018 Vc3S01_A0054 ad05aebd378830ab6283b1c9187ddf99 335 SUPERFAMILY SSF103481 241 314 7.32E-10 T 12-10-2018 Vc3S01_A0054 ad05aebd378830ab6283b1c9187ddf99 335 Pfam PF00892 EamA-like transporter family 6 134 9.7E-10 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Vc3S01_A0054 ad05aebd378830ab6283b1c9187ddf99 335 Pfam PF00892 EamA-like transporter family 159 314 2.2E-8 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Vc3S01_A1152 0c5d7c8a95f6ccd359577eabe4e382ef 373 Pfam PF01594 AI-2E family transporter 20 343 1.1E-32 T 12-10-2018 IPR002549 Transmembrane protein TqsA-like Vc3S01_A0301 b3d403ea8527cc2e2aec61cbf810f7b6 321 Pfam PF01389 OmpA-like transmembrane domain 23 180 1.7E-22 T 12-10-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 Vc3S01_A0301 b3d403ea8527cc2e2aec61cbf810f7b6 321 SUPERFAMILY SSF56925 23 181 8.89E-36 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel Vc3S01_A0301 b3d403ea8527cc2e2aec61cbf810f7b6 321 PRINTS PR01021 OMPA domain signature 239 254 2.4E-7 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Vc3S01_A0301 b3d403ea8527cc2e2aec61cbf810f7b6 321 PRINTS PR01021 OMPA domain signature 254 270 2.4E-7 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Vc3S01_A0301 b3d403ea8527cc2e2aec61cbf810f7b6 321 Pfam PF00691 OmpA family 215 303 4.7E-19 T 12-10-2018 IPR006665 OmpA-like domain Vc3S01_A0301 b3d403ea8527cc2e2aec61cbf810f7b6 321 Gene3D G3DSA:2.40.160.20 13 200 9.2E-44 T 12-10-2018 Vc3S01_A0301 b3d403ea8527cc2e2aec61cbf810f7b6 321 Gene3D G3DSA:3.30.1330.60 203 318 6.4E-32 T 12-10-2018 IPR036737 OmpA-like domain superfamily Vc3S01_A0301 b3d403ea8527cc2e2aec61cbf810f7b6 321 SUPERFAMILY SSF103088 196 309 5.1E-30 T 12-10-2018 IPR036737 OmpA-like domain superfamily Vc3S01_0040 a36ded7ebba6754b0a92000b8dfb4308 82 Hamap MF_00413 Sulfur carrier protein TusA [tusA]. 3 81 28.9 T 12-10-2018 IPR022931 Sulfur carrier protein TusA GO:0002143|GO:0097163 Vc3S01_0040 a36ded7ebba6754b0a92000b8dfb4308 82 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 12 36 - T 12-10-2018 IPR001455 TusA-like domain Vc3S01_0040 a36ded7ebba6754b0a92000b8dfb4308 82 Gene3D G3DSA:3.30.110.40 5 80 1.5E-28 T 12-10-2018 IPR036868 TusA-like domain superfamily Vc3S01_0040 a36ded7ebba6754b0a92000b8dfb4308 82 SUPERFAMILY SSF64307 9 80 6.02E-25 T 12-10-2018 IPR036868 TusA-like domain superfamily Vc3S01_0040 a36ded7ebba6754b0a92000b8dfb4308 82 Pfam PF01206 Sulfurtransferase TusA 10 79 9.6E-23 T 12-10-2018 IPR001455 TusA-like domain Vc3S01_A1163 52247384e39b4c77dc1f00a7485da578 386 Gene3D G3DSA:1.20.1250.20 13 194 6.4E-17 T 12-10-2018 Vc3S01_A1163 52247384e39b4c77dc1f00a7485da578 386 Pfam PF07690 Major Facilitator Superfamily 19 343 7.5E-24 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Vc3S01_A1163 52247384e39b4c77dc1f00a7485da578 386 Gene3D G3DSA:1.20.1250.20 201 383 2.2E-9 T 12-10-2018 Vc3S01_A1163 52247384e39b4c77dc1f00a7485da578 386 SUPERFAMILY SSF103473 18 374 2.75E-35 T 12-10-2018 IPR036259 MFS transporter superfamily Vc3S01_A0059 f3dff14d7d0e91383eb786e64f0e55f0 75 Pfam PF09016 Pas factor saposin fold 1 71 6.1E-26 T 12-10-2018 IPR015106 Pas factor saposin domain Vc3S01_A0059 f3dff14d7d0e91383eb786e64f0e55f0 75 Gene3D G3DSA:1.20.1280.100 1 72 8.9E-34 T 12-10-2018 Vc3S01_1750 927664cc27907c2c17e473fa48d7171a 144 Pfam PF06127 Protein of unknown function (DUF962) 1 142 1.3E-20 T 12-10-2018 IPR009305 Protein of unknown function DUF962 Vc3S01_2111 50fa45e8db728810e92beec4a21517dd 378 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 38 372 9.6E-84 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Vc3S01_2111 50fa45e8db728810e92beec4a21517dd 378 Gene3D G3DSA:2.40.420.20 301 370 5.7E-108 T 12-10-2018 Vc3S01_2111 50fa45e8db728810e92beec4a21517dd 378 Gene3D G3DSA:2.40.50.100 62 206 5.7E-108 T 12-10-2018 Vc3S01_2111 50fa45e8db728810e92beec4a21517dd 378 Gene3D G3DSA:1.10.287.470 97 170 5.7E-108 T 12-10-2018 Vc3S01_2111 50fa45e8db728810e92beec4a21517dd 378 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 63 290 7.7E-17 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Vc3S01_2111 50fa45e8db728810e92beec4a21517dd 378 SUPERFAMILY SSF111369 50 297 3.79E-80 T 12-10-2018 Vc3S01_2111 50fa45e8db728810e92beec4a21517dd 378 Gene3D G3DSA:2.40.30.170 50 300 5.7E-108 T 12-10-2018 Vc3S01_A1948 f81efbef5c3693baee5340c1992f5aba 247 Pfam PF06178 Oligogalacturonate-specific porin protein (KdgM) 24 239 4.5E-29 T 12-10-2018 IPR009331 Oligogalacturonate-specific porin Vc3S01_A1948 f81efbef5c3693baee5340c1992f5aba 247 Gene3D G3DSA:2.40.160.40 25 247 4.7E-51 T 12-10-2018 Vc3S01_A1948 f81efbef5c3693baee5340c1992f5aba 247 SUPERFAMILY SSF56935 36 244 1.77E-5 T 12-10-2018 Vc3S01_2748 39ef0697d2b70bec230653cb0ab06264 68 Pfam PF11697 Protein of unknown function (DUF3293) 7 38 7.6E-6 T 12-10-2018 IPR021710 Protein of unknown function DUF3293 Vc3S01_0268 451b72b4c52d938664d4ed5c31cae16b 128 Gene3D G3DSA:3.90.1150.10 24 58 1.0E-40 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Vc3S01_0268 451b72b4c52d938664d4ed5c31cae16b 128 Gene3D G3DSA:3.40.640.10 59 125 1.0E-40 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Vc3S01_0268 451b72b4c52d938664d4ed5c31cae16b 128 Pfam PF00202 Aminotransferase class-III 21 124 1.2E-33 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Vc3S01_0268 451b72b4c52d938664d4ed5c31cae16b 128 SUPERFAMILY SSF53383 16 125 1.46E-37 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Vc3S01_A1529 fd6de6a1908ab3980ae05871c1694b28 177 SUPERFAMILY SSF49777 22 177 6.41E-47 T 12-10-2018 IPR036610 PEBP-like superfamily Vc3S01_A1529 fd6de6a1908ab3980ae05871c1694b28 177 Pfam PF01161 Phosphatidylethanolamine-binding protein 41 175 1.7E-34 T 12-10-2018 IPR008914 Phosphatidylethanolamine-binding protein Vc3S01_A1529 fd6de6a1908ab3980ae05871c1694b28 177 Gene3D G3DSA:3.90.280.10 10 177 3.7E-51 T 12-10-2018 IPR036610 PEBP-like superfamily Vc3S01_A1529 fd6de6a1908ab3980ae05871c1694b28 177 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 45 175 2.0E-37 T 12-10-2018 IPR005247 YbhB/YbcL Vc3S01_A1915 27d5cf278678484b9446b0d57d373603 338 Pfam PF12680 SnoaL-like domain 11 132 3.4E-10 T 12-10-2018 IPR037401 SnoaL-like domain Vc3S01_A1915 27d5cf278678484b9446b0d57d373603 338 Gene3D G3DSA:3.10.450.50 203 332 1.9E-11 T 12-10-2018 Vc3S01_A1915 27d5cf278678484b9446b0d57d373603 338 Gene3D G3DSA:3.10.450.50 5 150 1.7E-22 T 12-10-2018 Vc3S01_A1915 27d5cf278678484b9446b0d57d373603 338 SUPERFAMILY SSF54427 185 328 1.55E-16 T 12-10-2018 IPR032710 NTF2-like domain superfamily Vc3S01_A1915 27d5cf278678484b9446b0d57d373603 338 SUPERFAMILY SSF54427 5 153 1.16E-25 T 12-10-2018 IPR032710 NTF2-like domain superfamily Vc3S01_A1590 7ffc7e5f0b390e5923824339515d93c6 186 Gene3D G3DSA:2.160.10.10 1 183 4.1E-48 T 12-10-2018 Vc3S01_A1590 7ffc7e5f0b390e5923824339515d93c6 186 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 15 44 1.8E-6 T 12-10-2018 IPR001451 Hexapeptide repeat Vc3S01_A1590 7ffc7e5f0b390e5923824339515d93c6 186 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 79 112 1.8E-4 T 12-10-2018 IPR001451 Hexapeptide repeat Vc3S01_A1590 7ffc7e5f0b390e5923824339515d93c6 186 SUPERFAMILY SSF51161 7 137 1.02E-30 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily Vc3S01_A1219 6adc7003e2115dae65b920a691505b72 320 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 15 305 6.2E-58 T 12-10-2018 IPR010732 Type VI secretion, TssG-like Vc3S01_A1219 6adc7003e2115dae65b920a691505b72 320 Pfam PF06996 Type VI secretion, TssG 15 305 4.8E-62 T 12-10-2018 IPR010732 Type VI secretion, TssG-like Vc3S01_A1136 6d7ac611dd05052b1cfce09c09238bfc 287 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 26 278 1.2E-10 T 12-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase Vc3S01_A1136 6d7ac611dd05052b1cfce09c09238bfc 287 Gene3D G3DSA:3.60.10.10 17 286 3.8E-28 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Vc3S01_A1136 6d7ac611dd05052b1cfce09c09238bfc 287 SUPERFAMILY SSF56219 21 285 1.18E-28 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Vc3S01_1946 18aed575586035c03e011ca0bccb556e 195 SUPERFAMILY SSF159894 3 102 5.49E-27 T 12-10-2018 Vc3S01_1946 18aed575586035c03e011ca0bccb556e 195 PIRSF PIRSF028788 4 195 5.3E-37 T 12-10-2018 IPR026256 Transcriptional regulator, TfoX/Sxy-type Vc3S01_1946 18aed575586035c03e011ca0bccb556e 195 Pfam PF04994 TfoX C-terminal domain 114 192 1.1E-27 T 12-10-2018 IPR007077 TfoX, C-terminal Vc3S01_1946 18aed575586035c03e011ca0bccb556e 195 Pfam PF04993 TfoX N-terminal domain 11 99 6.2E-23 T 12-10-2018 IPR007076 TfoX, N-terminal Vc3S01_1946 18aed575586035c03e011ca0bccb556e 195 Gene3D G3DSA:1.10.150.20 113 195 1.1E-16 T 12-10-2018 Vc3S01_1946 18aed575586035c03e011ca0bccb556e 195 Gene3D G3DSA:3.30.1460.30 4 102 6.1E-18 T 12-10-2018 Vc3S01_2704 ce6ef51da0f23329268fe6fff47a65f0 242 SMART SM00850 145 239 3.9E-24 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 Vc3S01_2704 ce6ef51da0f23329268fe6fff47a65f0 242 SUPERFAMILY SSF52172 1 128 1.18E-28 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_2704 ce6ef51da0f23329268fe6fff47a65f0 242 SMART SM00448 2 112 2.5E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_2704 ce6ef51da0f23329268fe6fff47a65f0 242 Gene3D G3DSA:3.40.50.2300 1 130 4.3E-29 T 12-10-2018 Vc3S01_2704 ce6ef51da0f23329268fe6fff47a65f0 242 Pfam PF00072 Response regulator receiver domain 5 112 5.4E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_2704 ce6ef51da0f23329268fe6fff47a65f0 242 Pfam PF04397 LytTr DNA-binding domain 146 238 2.8E-21 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 Vc3S01_2704 ce6ef51da0f23329268fe6fff47a65f0 242 Gene3D G3DSA:2.40.50.1020 149 241 1.8E-9 T 12-10-2018 Vc3S01_2591 26eb6af5b4b25375262e97a71f5f34c5 144 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 15 35 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Vc3S01_2591 26eb6af5b4b25375262e97a71f5f34c5 144 Gene3D G3DSA:3.30.700.10 18 144 5.3E-18 T 12-10-2018 Vc3S01_2591 26eb6af5b4b25375262e97a71f5f34c5 144 SUPERFAMILY SSF54523 17 137 1.57E-15 T 12-10-2018 Vc3S01_2591 26eb6af5b4b25375262e97a71f5f34c5 144 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 38 122 2.0E-8 T 12-10-2018 IPR031982 Type IV minor pilin ComP Vc3S01_2591 26eb6af5b4b25375262e97a71f5f34c5 144 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 15 37 1.4E-8 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Vc3S01_2591 26eb6af5b4b25375262e97a71f5f34c5 144 Pfam PF07963 Prokaryotic N-terminal methylation motif 12 37 3.2E-9 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Vc3S01_A0130 c03d0a1a17c68ded7eaf6b9bb853ae2e 257 Gene3D G3DSA:3.40.50.80 122 257 1.7E-45 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Vc3S01_A0130 c03d0a1a17c68ded7eaf6b9bb853ae2e 257 Pfam PF04954 Siderophore-interacting protein 127 238 2.1E-31 T 12-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain Vc3S01_A0130 c03d0a1a17c68ded7eaf6b9bb853ae2e 257 Pfam PF08021 Siderophore-interacting FAD-binding domain 12 119 7.5E-31 T 12-10-2018 IPR013113 FAD-binding 9, siderophore-interacting Vc3S01_A0130 c03d0a1a17c68ded7eaf6b9bb853ae2e 257 SUPERFAMILY SSF63380 6 118 5.11E-9 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Vc3S01_A0130 c03d0a1a17c68ded7eaf6b9bb853ae2e 257 Gene3D G3DSA:2.40.30.10 1 119 3.4E-31 T 12-10-2018 Vc3S01_1665 cc1cc3dff3c614a83a8aa581a0dfe2e2 220 Pfam PF11205 Protein of unknown function (DUF2987) 22 166 2.3E-53 T 12-10-2018 IPR021370 Protein of unknown function DUF2987 Vc3S01_p30107 dc9c261d030b896971aaa5e5ed4386a5 215 Gene3D G3DSA:3.40.50.880 1 215 3.1E-88 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Vc3S01_p30107 dc9c261d030b896971aaa5e5ed4386a5 215 SUPERFAMILY SSF52317 1 212 8.29E-54 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Vc3S01_p30107 dc9c261d030b896971aaa5e5ed4386a5 215 PIRSF PIRSF006320 1 215 1.1E-97 T 12-10-2018 IPR026041 Glyoxalase ElbB Vc3S01_2426 24d8f66a3b123da30adba107714e3a36 251 Pfam PF01925 Sulfite exporter TauE/SafE 10 249 6.5E-36 T 12-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 Vc3S01_0914 d954b56e95b611d129d89992776d31f7 264 Gene3D G3DSA:3.30.70.580 1 104 3.4E-39 T 12-10-2018 Vc3S01_0914 d954b56e95b611d129d89992776d31f7 264 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 243 34.436 T 12-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 Vc3S01_0914 d954b56e95b611d129d89992776d31f7 264 SUPERFAMILY SSF55120 1 256 3.02E-93 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Vc3S01_0914 d954b56e95b611d129d89992776d31f7 264 Gene3D G3DSA:3.30.70.660 105 242 2.7E-49 T 12-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 Vc3S01_0914 d954b56e95b611d129d89992776d31f7 264 PIRSF PIRSF001430 1 251 3.2E-76 T 12-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 Vc3S01_0914 d954b56e95b611d129d89992776d31f7 264 Pfam PF01416 tRNA pseudouridine synthase 8 102 1.6E-9 T 12-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 Vc3S01_0914 d954b56e95b611d129d89992776d31f7 264 Pfam PF01416 tRNA pseudouridine synthase 144 244 1.2E-29 T 12-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 Vc3S01_0914 d954b56e95b611d129d89992776d31f7 264 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 2 238 1.2E-73 T 12-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 Vc3S01_A1039 2effd91dd2df6f23e8024d4e372a9cf6 272 Pfam PF00563 EAL domain 26 255 3.4E-44 T 12-10-2018 IPR001633 EAL domain Vc3S01_A1039 2effd91dd2df6f23e8024d4e372a9cf6 272 SMART SM00052 13 260 1.2E-12 T 12-10-2018 IPR001633 EAL domain Vc3S01_A1039 2effd91dd2df6f23e8024d4e372a9cf6 272 Gene3D G3DSA:3.20.20.450 21 270 4.6E-47 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_A1039 2effd91dd2df6f23e8024d4e372a9cf6 272 SUPERFAMILY SSF141868 24 263 7.32E-51 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_A0249 29c0cb9c8d716e3f400485b83134299a 410 Pfam PF01266 FAD dependent oxidoreductase 6 397 6.5E-65 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Vc3S01_A0249 29c0cb9c8d716e3f400485b83134299a 410 SUPERFAMILY SSF51905 5 300 1.47E-44 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_A0249 29c0cb9c8d716e3f400485b83134299a 410 Gene3D G3DSA:3.50.50.60 6 393 1.0E-81 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_A0249 29c0cb9c8d716e3f400485b83134299a 410 Gene3D G3DSA:3.30.9.10 89 359 1.0E-81 T 12-10-2018 Vc3S01_2572 b3b42b1e055565bd09deabd6c25c670b 129 Hamap MF_01178 Sigma factor-binding protein Crl [crl]. 4 129 31.201 T 12-10-2018 IPR009986 Sigma factor-binding protein Crl GO:0045893 Vc3S01_2572 b3b42b1e055565bd09deabd6c25c670b 129 Pfam PF07417 Transcriptional regulator Crl 6 123 8.5E-49 T 12-10-2018 IPR009986 Sigma factor-binding protein Crl GO:0045893 Vc3S01_2572 b3b42b1e055565bd09deabd6c25c670b 129 Gene3D G3DSA:3.30.310.230 2 128 1.4E-45 T 12-10-2018 IPR038208 Sigma factor-binding protein Crl superfamily GO:0045893 Vc3S01_0703 14d7234f1b22b9647ceda4729de35e49 198 Pfam PF13505 Outer membrane protein beta-barrel domain 7 198 4.3E-20 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel Vc3S01_0703 14d7234f1b22b9647ceda4729de35e49 198 Gene3D G3DSA:2.40.160.20 20 198 1.8E-15 T 12-10-2018 Vc3S01_0703 14d7234f1b22b9647ceda4729de35e49 198 SUPERFAMILY SSF56925 21 198 3.4E-18 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel Vc3S01_A0797 3c13046bbf38a6af1cb1f3ec75b41a71 430 Gene3D G3DSA:3.40.50.300 1 220 3.5E-74 T 12-10-2018 Vc3S01_A0797 3c13046bbf38a6af1cb1f3ec75b41a71 430 SUPERFAMILY SSF52540 75 356 1.89E-73 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A0797 3c13046bbf38a6af1cb1f3ec75b41a71 430 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 153 161 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site Vc3S01_A0797 3c13046bbf38a6af1cb1f3ec75b41a71 430 SMART SM00487 20 229 2.0E-55 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Vc3S01_A0797 3c13046bbf38a6af1cb1f3ec75b41a71 430 SMART SM00490 258 339 1.3E-30 T 12-10-2018 IPR001650 Helicase, C-terminal Vc3S01_A0797 3c13046bbf38a6af1cb1f3ec75b41a71 430 Gene3D G3DSA:3.40.50.300 221 424 1.7E-48 T 12-10-2018 Vc3S01_A0797 3c13046bbf38a6af1cb1f3ec75b41a71 430 Pfam PF00270 DEAD/DEAH box helicase 25 193 1.0E-51 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Vc3S01_A0797 3c13046bbf38a6af1cb1f3ec75b41a71 430 Pfam PF00271 Helicase conserved C-terminal domain 231 339 3.3E-29 T 12-10-2018 IPR001650 Helicase, C-terminal Vc3S01_A0531 6a7e1f0c10f3b82c8c9dfb16e1fa96bf 408 SUPERFAMILY SSF56925 287 406 4.45E-6 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel Vc3S01_A0531 6a7e1f0c10f3b82c8c9dfb16e1fa96bf 408 SUPERFAMILY SSF56935 75 312 4.76E-5 T 12-10-2018 Vc3S01_A0531 6a7e1f0c10f3b82c8c9dfb16e1fa96bf 408 Pfam PF10082 Putative beta-barrel porin 2 41 405 8.5E-28 T 12-10-2018 IPR018759 Putative beta-barrel porin 2 Vc3S01_1942 9dd7731d628c24b704dca1810832857c 414 Pfam PF06097 Bacterial protein of unknown function (DUF945) 5 404 1.7E-41 T 12-10-2018 IPR010352 Protein of unknown function DUF945 Vc3S01_2991 ce98098831a583929b2e08349478b374 731 Pfam PF06082 Exopolysaccharide biosynthesis protein YbjH 33 716 5.8E-244 T 12-10-2018 IPR010344 Exopolysaccharide biosynthesis protein YbjH Vc3S01_A1252 9eecfb3ee5f3cee9099ae0278bc43213 470 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 217 224 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 Vc3S01_A1252 9eecfb3ee5f3cee9099ae0278bc43213 470 SUPERFAMILY SSF53720 15 441 1.44E-115 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Vc3S01_A1252 9eecfb3ee5f3cee9099ae0278bc43213 470 Gene3D G3DSA:3.40.309.10 221 420 3.5E-154 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Vc3S01_A1252 9eecfb3ee5f3cee9099ae0278bc43213 470 PIRSF PIRSF036492 2 470 2.6E-159 T 12-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 Vc3S01_A1252 9eecfb3ee5f3cee9099ae0278bc43213 470 Pfam PF00171 Aldehyde dehydrogenase family 35 440 1.6E-94 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Vc3S01_A1252 9eecfb3ee5f3cee9099ae0278bc43213 470 Gene3D G3DSA:3.40.605.10 23 440 3.5E-154 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Vc3S01_A0374 231f8c8f57cd65c6b0f9dcb6183c2f02 146 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 8 143 2.6E-23 T 12-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 Vc3S01_1081 fae39d638e8183924bdfa689473d485b 695 Pfam PF05170 AsmA family 1 585 8.8E-114 T 12-10-2018 IPR007844 AsmA Vc3S01_A1746 0fbdf502a5dd9df6e84896b479dacee9 217 Gene3D G3DSA:3.40.50.850 7 212 3.6E-35 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Vc3S01_A1746 0fbdf502a5dd9df6e84896b479dacee9 217 SUPERFAMILY SSF52499 4 211 2.62E-25 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Vc3S01_A1746 0fbdf502a5dd9df6e84896b479dacee9 217 Pfam PF00857 Isochorismatase family 10 209 1.2E-31 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 Vc3S01_0769 b1dc81dbcd1b3cb1d4633a3bb233013f 528 Pfam PF03806 AbgT putative transporter family 19 526 1.1E-226 T 12-10-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 Vc3S01_A0423 70f787ef10464e7910bc9499bdd8a825 542 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 378 405 2.5E-22 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Vc3S01_A0423 70f787ef10464e7910bc9499bdd8a825 542 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 101 116 2.5E-22 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Vc3S01_A0423 70f787ef10464e7910bc9499bdd8a825 542 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 407 436 2.5E-22 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Vc3S01_A0423 70f787ef10464e7910bc9499bdd8a825 542 SUPERFAMILY SSF58104 233 542 2.35E-73 T 12-10-2018 Vc3S01_A0423 70f787ef10464e7910bc9499bdd8a825 542 Pfam PF00672 HAMP domain 215 261 1.1E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Vc3S01_A0423 70f787ef10464e7910bc9499bdd8a825 542 SMART SM00283 280 541 1.8E-70 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Vc3S01_A0423 70f787ef10464e7910bc9499bdd8a825 542 SMART SM00304 213 265 1.4E-12 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Vc3S01_A0423 70f787ef10464e7910bc9499bdd8a825 542 Gene3D G3DSA:1.10.287.950 213 542 4.4E-74 T 12-10-2018 Vc3S01_A0423 70f787ef10464e7910bc9499bdd8a825 542 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 343 508 2.4E-41 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Vc3S01_p20081 669bea104f92db734a330e4450e9fa64 396 SUPERFAMILY SSF53335 228 395 1.76E-24 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Vc3S01_p20081 669bea104f92db734a330e4450e9fa64 396 Pfam PF05175 Methyltransferase small domain 269 355 2.4E-5 T 12-10-2018 IPR007848 Methyltransferase small domain GO:0008168 Vc3S01_p20081 669bea104f92db734a330e4450e9fa64 396 Gene3D G3DSA:3.40.50.150 231 396 4.3E-19 T 12-10-2018 Vc3S01_p20081 669bea104f92db734a330e4450e9fa64 396 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 308 314 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Vc3S01_A2017 e4baa5840a13193c2aef3292a02333a0 612 SMART SM00382 386 577 4.3E-19 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_A2017 e4baa5840a13193c2aef3292a02333a0 612 ProSitePatterns PS00211 ABC transporters family signature. 503 517 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_A2017 e4baa5840a13193c2aef3292a02333a0 612 SUPERFAMILY SSF52540 353 601 2.11E-89 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A2017 e4baa5840a13193c2aef3292a02333a0 612 SUPERFAMILY SSF90123 28 344 1.02E-50 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Vc3S01_A2017 e4baa5840a13193c2aef3292a02333a0 612 Pfam PF00005 ABC transporter 378 531 1.9E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_A2017 e4baa5840a13193c2aef3292a02333a0 612 Pfam PF00664 ABC transporter transmembrane region 41 308 2.8E-17 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Vc3S01_A2017 e4baa5840a13193c2aef3292a02333a0 612 Gene3D G3DSA:1.20.1560.10 8 335 9.9E-25 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Vc3S01_A2017 e4baa5840a13193c2aef3292a02333a0 612 Gene3D G3DSA:3.40.50.300 351 604 1.4E-92 T 12-10-2018 Vc3S01_A1522 114c6e13b289c7756d293a7196590e39 179 Gene3D G3DSA:3.40.30.10 2 162 5.9E-22 T 12-10-2018 Vc3S01_A1522 114c6e13b289c7756d293a7196590e39 179 Pfam PF08534 Redoxin 8 147 1.8E-20 T 12-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 Vc3S01_A1522 114c6e13b289c7756d293a7196590e39 179 SUPERFAMILY SSF52833 7 176 2.68E-30 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Vc3S01_A1203 117ef7566e860aebbf5dd9f7b4ccdfe6 175 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 157 7.2E-15 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Vc3S01_A1203 117ef7566e860aebbf5dd9f7b4ccdfe6 175 Gene3D G3DSA:3.40.50.1240 1 171 1.7E-19 T 12-10-2018 IPR029033 Histidine phosphatase superfamily Vc3S01_A1203 117ef7566e860aebbf5dd9f7b4ccdfe6 175 SUPERFAMILY SSF53254 1 160 4.07E-19 T 12-10-2018 IPR029033 Histidine phosphatase superfamily Vc3S01_1582 4b6b76f65d1a7d3118486eb9f3da8874 100 Pfam PF05488 PAAR motif 25 90 2.5E-21 T 12-10-2018 IPR008727 PAAR motif Vc3S01_1582 4b6b76f65d1a7d3118486eb9f3da8874 100 Gene3D G3DSA:2.60.200.60 2 57 1.2E-8 T 12-10-2018 Vc3S01_1582 4b6b76f65d1a7d3118486eb9f3da8874 100 Gene3D G3DSA:2.60.200.60 58 99 4.9E-10 T 12-10-2018 Vc3S01_A1177 e2990a7b5741310bd3604a4797d1bb5a 493 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 328 451 8.1E-7 T 12-10-2018 Vc3S01_A1177 e2990a7b5741310bd3604a4797d1bb5a 493 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 16 274 1.1E-29 T 12-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain Vc3S01_A1177 e2990a7b5741310bd3604a4797d1bb5a 493 Gene3D G3DSA:3.90.245.10 12 99 1.3E-9 T 12-10-2018 IPR036452 Ribonucleoside hydrolase-like Vc3S01_A1177 e2990a7b5741310bd3604a4797d1bb5a 493 Gene3D G3DSA:3.10.180.10 320 482 1.4E-18 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Vc3S01_A1177 e2990a7b5741310bd3604a4797d1bb5a 493 Gene3D G3DSA:3.90.245.10 100 314 9.4E-30 T 12-10-2018 IPR036452 Ribonucleoside hydrolase-like Vc3S01_A1177 e2990a7b5741310bd3604a4797d1bb5a 493 SUPERFAMILY SSF53590 15 273 5.49E-35 T 12-10-2018 IPR036452 Ribonucleoside hydrolase-like Vc3S01_A1177 e2990a7b5741310bd3604a4797d1bb5a 493 SUPERFAMILY SSF54593 323 485 2.15E-18 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Vc3S01_1032 2c999a8b022bf73f901c64210ad8a157 144 Pfam PF10952 Protein of unknown function (DUF2753) 5 144 8.1E-76 T 12-10-2018 IPR020206 Uncharacterised protein family, VP2110 Vc3S01_1032 2c999a8b022bf73f901c64210ad8a157 144 ProDom PD087558 YRN2_VIBPA ORF2 VV1184 VV13101 MOTY 3'REGION VC1009 VP2110 1 143 2.0E-70 T 12-10-2018 IPR020206 Uncharacterised protein family, VP2110 Vc3S01_A1369 0036a43ef8e5366f0f96ce32ba21433a 316 Gene3D G3DSA:1.10.3470.10 4 315 1.7E-57 T 12-10-2018 IPR037294 ABC transporter, BtuC-like Vc3S01_A1369 0036a43ef8e5366f0f96ce32ba21433a 316 Pfam PF01032 FecCD transport family 27 312 4.2E-54 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Vc3S01_A1369 0036a43ef8e5366f0f96ce32ba21433a 316 SUPERFAMILY SSF81345 6 312 5.49E-59 T 12-10-2018 IPR037294 ABC transporter, BtuC-like Vc3S01_A1912 5c0dfa0283d84b7d5fb2ef7bdd0dd860 456 Pfam PF03315 Serine dehydratase beta chain 3 153 6.5E-52 T 12-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 Vc3S01_A1912 5c0dfa0283d84b7d5fb2ef7bdd0dd860 456 SUPERFAMILY SSF143548 16 155 7.06E-44 T 12-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 Vc3S01_A1912 5c0dfa0283d84b7d5fb2ef7bdd0dd860 456 Pfam PF03313 Serine dehydratase alpha chain 183 447 7.9E-95 T 12-10-2018 IPR005130 Serine dehydratase-like, alpha subunit Vc3S01_A1912 5c0dfa0283d84b7d5fb2ef7bdd0dd860 456 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 3 448 1.8E-196 T 12-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 Vc3S01_A1912 5c0dfa0283d84b7d5fb2ef7bdd0dd860 456 Gene3D G3DSA:3.30.1330.90 10 157 8.2E-50 T 12-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 Vc3S01_A0916 b86b62b7635cbdcae842cd08c82c458d 249 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 12-10-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 Vc3S01_A0916 b86b62b7635cbdcae842cd08c82c458d 249 SUPERFAMILY SSF52402 2 242 3.49E-80 T 12-10-2018 Vc3S01_A0916 b86b62b7635cbdcae842cd08c82c458d 249 Pfam PF01012 Electron transfer flavoprotein domain 26 204 7.5E-46 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Vc3S01_A0916 b86b62b7635cbdcae842cd08c82c458d 249 SMART SM00893 23 211 3.9E-60 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Vc3S01_A0916 b86b62b7635cbdcae842cd08c82c458d 249 PIRSF PIRSF000090 1 249 3.5E-79 T 12-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 Vc3S01_A0916 b86b62b7635cbdcae842cd08c82c458d 249 Gene3D G3DSA:3.40.50.620 1 248 2.4E-81 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Vc3S01_A1292 ecef4515b3fdcb394c03c656d1a43c7d 332 Pfam PF06996 Type VI secretion, TssG 10 317 9.6E-87 T 12-10-2018 IPR010732 Type VI secretion, TssG-like Vc3S01_A1292 ecef4515b3fdcb394c03c656d1a43c7d 332 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 10 317 3.6E-98 T 12-10-2018 IPR010732 Type VI secretion, TssG-like Vc3S01_A1334 da11021796557cae618dc6869620bcef 145 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 10 90 2.7E-25 T 12-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_A1334 da11021796557cae618dc6869620bcef 145 SUPERFAMILY SSF46604 94 141 3.14E-11 T 12-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_A1334 da11021796557cae618dc6869620bcef 145 Gene3D G3DSA:1.20.5.440 97 140 2.6E-15 T 12-10-2018 Vc3S01_A1334 da11021796557cae618dc6869620bcef 145 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 8 137 20.805 T 12-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_A1334 da11021796557cae618dc6869620bcef 145 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 15 93 1.0E-26 T 12-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_A1334 da11021796557cae618dc6869620bcef 145 SUPERFAMILY SSF51344 8 92 3.27E-21 T 12-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_A1334 da11021796557cae618dc6869620bcef 145 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 9 139 3.0E-38 T 12-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_A1334 da11021796557cae618dc6869620bcef 145 Gene3D G3DSA:2.60.15.10 8 96 3.7E-26 T 12-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_A1334 da11021796557cae618dc6869620bcef 145 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 94 138 1.9E-9 T 12-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Vc3S01_2950 b5bc17a6d4066ad8eeb1a220ee0f95e5 305 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 4 298 20.716 T 12-10-2018 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 Vc3S01_2950 b5bc17a6d4066ad8eeb1a220ee0f95e5 305 Pfam PF01040 UbiA prenyltransferase family 21 267 1.4E-38 T 12-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 Vc3S01_2950 b5bc17a6d4066ad8eeb1a220ee0f95e5 305 PIRSF PIRSF005355 1 303 4.1E-84 T 12-10-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 Vc3S01_2950 b5bc17a6d4066ad8eeb1a220ee0f95e5 305 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 13 295 4.6E-97 T 12-10-2018 Vc3S01_1649 873784dd66e59b4dcaba8cf60a80e453 454 SUPERFAMILY SSF46689 10 115 7.62E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_1649 873784dd66e59b4dcaba8cf60a80e453 454 Gene3D G3DSA:3.30.420.10 130 332 8.8E-16 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Vc3S01_1649 873784dd66e59b4dcaba8cf60a80e453 454 Pfam PF13551 Winged helix-turn helix 12 71 7.2E-8 T 12-10-2018 Vc3S01_1649 873784dd66e59b4dcaba8cf60a80e453 454 SUPERFAMILY SSF53098 132 291 2.28E-19 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Vc3S01_A1106 873784dd66e59b4dcaba8cf60a80e453 454 SUPERFAMILY SSF46689 10 115 7.62E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_A1106 873784dd66e59b4dcaba8cf60a80e453 454 Gene3D G3DSA:3.30.420.10 130 332 8.8E-16 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Vc3S01_A1106 873784dd66e59b4dcaba8cf60a80e453 454 Pfam PF13551 Winged helix-turn helix 12 71 7.2E-8 T 12-10-2018 Vc3S01_A1106 873784dd66e59b4dcaba8cf60a80e453 454 SUPERFAMILY SSF53098 132 291 2.28E-19 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Vc3S01_1095 dae02ea0c2d3fe185e3522afe4186eaa 77 SUPERFAMILY SSF47336 2 76 1.2E-23 T 12-10-2018 IPR036736 ACP-like superfamily Vc3S01_1095 dae02ea0c2d3fe185e3522afe4186eaa 77 Pfam PF00550 Phosphopantetheine attachment site 6 73 2.2E-16 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain Vc3S01_1095 dae02ea0c2d3fe185e3522afe4186eaa 77 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site Vc3S01_1095 dae02ea0c2d3fe185e3522afe4186eaa 77 Gene3D G3DSA:1.10.1200.10 1 76 1.9E-30 T 12-10-2018 IPR036736 ACP-like superfamily Vc3S01_1095 dae02ea0c2d3fe185e3522afe4186eaa 77 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 76 6.6E-37 T 12-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 Vc3S01_1095 dae02ea0c2d3fe185e3522afe4186eaa 77 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.938 T 12-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 Vc3S01_A1588 ab1c1a23121d7709fa5ca3f08ce07bfb 302 SUPERFAMILY SSF161111 14 230 7.59E-52 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Vc3S01_A1588 ab1c1a23121d7709fa5ca3f08ce07bfb 302 Pfam PF01545 Cation efflux family 23 229 2.6E-37 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Vc3S01_A1588 ab1c1a23121d7709fa5ca3f08ce07bfb 302 Gene3D G3DSA:1.20.1510.10 18 229 8.7E-34 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Vc3S01_A1588 ab1c1a23121d7709fa5ca3f08ce07bfb 302 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 18 301 4.4E-64 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Vc3S01_3187 40c028551a3e8d1146f45ee3e4f86eae 200 Gene3D G3DSA:3.40.30.10 17 200 3.3E-55 T 12-10-2018 Vc3S01_3187 40c028551a3e8d1146f45ee3e4f86eae 200 Pfam PF01323 DSBA-like thioredoxin domain 40 183 1.4E-28 T 12-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 Vc3S01_3187 40c028551a3e8d1146f45ee3e4f86eae 200 ProSitePatterns PS00194 Thioredoxin family active site. 41 59 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Vc3S01_3187 40c028551a3e8d1146f45ee3e4f86eae 200 PIRSF PIRSF001488 1 200 8.8E-70 T 12-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL Vc3S01_3187 40c028551a3e8d1146f45ee3e4f86eae 200 SUPERFAMILY SSF52833 20 197 3.18E-45 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Vc3S01_p30122 e71fb3523aa734f8c4b3c41c711e1ed7 415 Pfam PF14319 Transposase zinc-binding domain 30 135 3.3E-27 T 12-10-2018 IPR026889 Transposase zinc-binding domain Vc3S01_p30122 e71fb3523aa734f8c4b3c41c711e1ed7 415 Pfam PF04986 Putative transposase 158 336 1.1E-49 T 12-10-2018 IPR007069 Transposase, IS801/IS1294 GO:0003677|GO:0004803|GO:0006313 Vc3S01_A0251 9503ac446fa341ac3d14e1d9409620dc 135 SUPERFAMILY SSF54403 55 116 3.64E-8 T 12-10-2018 Vc3S01_p20188 5cc56cfcb054d885f1a5ad71b8511486 98 Gene3D G3DSA:1.10.10.10 1 97 2.6E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_p20188 5cc56cfcb054d885f1a5ad71b8511486 98 Pfam PF09904 Winged helix-turn helix 8 90 1.4E-28 T 12-10-2018 IPR017162 Uncharacterised conserved protein UCP037266 Vc3S01_A1442 7704d60885e3557a932a06306850a397 347 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 9 338 1.0E-78 T 12-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Vc3S01_A1442 7704d60885e3557a932a06306850a397 347 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 176 188 - T 12-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Vc3S01_A1442 7704d60885e3557a932a06306850a397 347 SUPERFAMILY SSF51412 6 336 1.57E-98 T 12-10-2018 Vc3S01_A1442 7704d60885e3557a932a06306850a397 347 TIGRFAM TIGR01305 GMP_reduct_1: guanosine monophosphate reductase 2 344 7.4E-185 T 12-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 Vc3S01_A1442 7704d60885e3557a932a06306850a397 347 SMART SM01240 7 344 1.7E-137 T 12-10-2018 Vc3S01_A1442 7704d60885e3557a932a06306850a397 347 Gene3D G3DSA:3.20.20.70 1 345 8.2E-117 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_A1442 7704d60885e3557a932a06306850a397 347 Hamap MF_00596 GMP reductase [guaC]. 1 345 50.081 T 12-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 Vc3S01_A1442 7704d60885e3557a932a06306850a397 347 PIRSF PIRSF000235 1 347 9.1E-195 T 12-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 Vc3S01_A1444 0536a62fe35f3cf6470991ef1cf65e92 146 Pfam PF00989 PAS fold 16 134 1.1E-6 T 12-10-2018 IPR013767 PAS fold GO:0006355 Vc3S01_A1444 0536a62fe35f3cf6470991ef1cf65e92 146 SUPERFAMILY SSF55785 10 127 7.5E-12 T 12-10-2018 IPR035965 PAS domain superfamily Vc3S01_A1444 0536a62fe35f3cf6470991ef1cf65e92 146 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 16 80 8.8E-6 T 12-10-2018 IPR000014 PAS domain Vc3S01_A1444 0536a62fe35f3cf6470991ef1cf65e92 146 Gene3D G3DSA:3.30.450.20 6 141 1.5E-31 T 12-10-2018 Vc3S01_A0317 5bbcdc76a8a45e31db9ea341184ab2ee 120 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site Vc3S01_A0317 5bbcdc76a8a45e31db9ea341184ab2ee 120 Pfam PF00460 Flagella basal body rod protein 11 38 2.7E-7 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Vc3S01_A0317 5bbcdc76a8a45e31db9ea341184ab2ee 120 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 5 118 4.8E-34 T 12-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 Vc3S01_A0317 5bbcdc76a8a45e31db9ea341184ab2ee 120 PIRSF PIRSF002889 1 120 1.3E-33 T 12-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 Vc3S01_1881 e4c51df47b92263f9f1ab48374cb0b31 262 SUPERFAMILY SSF46689 27 86 3.33E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_1881 e4c51df47b92263f9f1ab48374cb0b31 262 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 48 2.0E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Vc3S01_1881 e4c51df47b92263f9f1ab48374cb0b31 262 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 56 79 2.0E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Vc3S01_1881 e4c51df47b92263f9f1ab48374cb0b31 262 Gene3D G3DSA:1.10.357.10 22 211 8.2E-17 T 12-10-2018 Vc3S01_1881 e4c51df47b92263f9f1ab48374cb0b31 262 Pfam PF00440 Bacterial regulatory proteins, tetR family 37 81 7.9E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Vc3S01_A0634 8d4ffd42727868da6432b1519cc9eb6e 585 Pfam PF00665 Integrase core domain 145 291 7.1E-14 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Vc3S01_A0634 8d4ffd42727868da6432b1519cc9eb6e 585 SUPERFAMILY SSF53098 142 303 1.52E-15 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Vc3S01_A0634 8d4ffd42727868da6432b1519cc9eb6e 585 Gene3D G3DSA:3.30.420.10 183 341 3.5E-12 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Vc3S01_A0044 8fe16ea586aa57fa2a0c86f3cfd43862 481 PIRSF PIRSF006247 1 481 4.0E-162 T 12-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 Vc3S01_A0044 8fe16ea586aa57fa2a0c86f3cfd43862 481 Pfam PF02386 Cation transport protein 63 474 2.1E-45 T 12-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 Vc3S01_0450 8820d0a72eff605ca1e614ff1529fc30 444 Pfam PF02378 Phosphotransferase system, EIIC 32 351 1.2E-64 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 Vc3S01_0450 8820d0a72eff605ca1e614ff1529fc30 444 PIRSF PIRSF006351 4 434 1.5E-146 T 12-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 Vc3S01_0450 8820d0a72eff605ca1e614ff1529fc30 444 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 16 424 4.0E-113 T 12-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 Vc3S01_A1223 d1cfbd472c5b484d7115f5ea6278fae7 503 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 58 497 4.9E-127 T 12-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath Vc3S01_A1223 d1cfbd472c5b484d7115f5ea6278fae7 503 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 67 497 2.0E-153 T 12-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath Vc3S01_2386 ae5fac1cb7780e0caad815919bfdd1cf 173 Pfam PF03350 Uncharacterized protein family, UPF0114 8 132 7.9E-22 T 12-10-2018 IPR005134 Uncharacterised protein family UPF0114 Vc3S01_A0038 529c699546ea9d1796764248f996a672 285 Pfam PF00005 ABC transporter 21 158 3.2E-25 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_A0038 529c699546ea9d1796764248f996a672 285 Gene3D G3DSA:3.40.50.300 2 248 1.1E-45 T 12-10-2018 Vc3S01_A0038 529c699546ea9d1796764248f996a672 285 SUPERFAMILY SSF52540 4 222 5.22E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A0038 529c699546ea9d1796764248f996a672 285 SMART SM00382 30 208 4.3E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_A0179 c750bae6efe9a26f066ad4e826b5b2b9 147 Pfam PF01322 Cytochrome C' 28 144 9.9E-22 T 12-10-2018 IPR002321 Cytochrome c, class II GO:0005506|GO:0009055|GO:0020037 Vc3S01_A0179 c750bae6efe9a26f066ad4e826b5b2b9 147 SUPERFAMILY SSF47175 23 145 3.09E-29 T 12-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 Vc3S01_A0179 c750bae6efe9a26f066ad4e826b5b2b9 147 Gene3D G3DSA:1.20.120.10 24 146 2.7E-24 T 12-10-2018 Vc3S01_1036 cccf54192ff7479773447610c49af485 212 Pfam PF04205 FMN-binding domain 100 189 2.9E-19 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Vc3S01_1036 cccf54192ff7479773447610c49af485 212 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 9 193 2.8E-64 T 12-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 Vc3S01_1036 cccf54192ff7479773447610c49af485 212 Hamap MF_00479 Ion-translocating oxidoreductase complex subunit G [rsxG]. 2 194 26.762 T 12-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 Vc3S01_1036 cccf54192ff7479773447610c49af485 212 SMART SM00900 100 192 1.0E-32 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Vc3S01_1036 cccf54192ff7479773447610c49af485 212 PIRSF PIRSF006091 1 205 1.1E-77 T 12-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 Vc3S01_A0733 b2de07b2c367edd6262cbaf7b3ebf9cf 591 SUPERFAMILY SSF53474 225 526 3.47E-33 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_A0733 b2de07b2c367edd6262cbaf7b3ebf9cf 591 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 95 266 1.2E-73 T 12-10-2018 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 Vc3S01_A0733 b2de07b2c367edd6262cbaf7b3ebf9cf 591 Gene3D G3DSA:3.40.50.1820 223 518 5.6E-9 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_A0733 b2de07b2c367edd6262cbaf7b3ebf9cf 591 TIGRFAM TIGR01838 PHA_synth_I: poly(R)-hydroxyalkanoic acid synthase, class I 55 584 6.4E-248 T 12-10-2018 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I GO:0005737|GO:0016746|GO:0042619 Vc3S01_0915 936e30d93b2edc25b5ff0c273ccdfda5 308 SUPERFAMILY SSF52096 25 282 5.29E-84 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Vc3S01_0915 936e30d93b2edc25b5ff0c273ccdfda5 308 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 284 4.4E-139 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Vc3S01_0915 936e30d93b2edc25b5ff0c273ccdfda5 308 Gene3D G3DSA:3.90.226.10 25 286 1.1E-81 T 12-10-2018 Vc3S01_0915 936e30d93b2edc25b5ff0c273ccdfda5 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 7.1E-39 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Vc3S01_0915 936e30d93b2edc25b5ff0c273ccdfda5 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 7.1E-39 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Vc3S01_0915 936e30d93b2edc25b5ff0c273ccdfda5 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 7.1E-39 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Vc3S01_0915 936e30d93b2edc25b5ff0c273ccdfda5 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 7.1E-39 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Vc3S01_0915 936e30d93b2edc25b5ff0c273ccdfda5 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 7.1E-39 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Vc3S01_0915 936e30d93b2edc25b5ff0c273ccdfda5 308 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 281 37.416 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Vc3S01_0915 936e30d93b2edc25b5ff0c273ccdfda5 308 Pfam PF01039 Carboxyl transferase domain 100 240 6.9E-14 T 12-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 Vc3S01_0054 92c9dcd177a329813d94ef430dedf5d1 471 Pfam PF02581 Thiamine monophosphate synthase 236 429 1.0E-49 T 12-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Vc3S01_0054 92c9dcd177a329813d94ef430dedf5d1 471 Gene3D G3DSA:3.20.20.70 220 451 6.7E-51 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_0054 92c9dcd177a329813d94ef430dedf5d1 471 SUPERFAMILY SSF51391 226 447 1.44E-57 T 12-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Vc3S01_A0907 b411f9fdd49685da7cb44f636477c348 229 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 111 1.2E-16 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Vc3S01_A0907 b411f9fdd49685da7cb44f636477c348 229 Gene3D G3DSA:1.10.3720.10 2 218 3.3E-46 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_A0907 b411f9fdd49685da7cb44f636477c348 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 28 216 7.7E-21 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Vc3S01_A0907 b411f9fdd49685da7cb44f636477c348 229 SUPERFAMILY SSF161098 10 202 1.44E-37 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_1752 b65eab99a41b4b1128f8708fc8d1ee0b 300 SUPERFAMILY SSF103481 196 270 8.76E-6 T 12-10-2018 Vc3S01_1752 b65eab99a41b4b1128f8708fc8d1ee0b 300 SUPERFAMILY SSF103481 41 123 7.59E-7 T 12-10-2018 Vc3S01_1752 b65eab99a41b4b1128f8708fc8d1ee0b 300 Pfam PF00892 EamA-like transporter family 139 275 1.5E-10 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Vc3S01_1752 b65eab99a41b4b1128f8708fc8d1ee0b 300 Pfam PF00892 EamA-like transporter family 3 124 3.9E-15 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Vc3S01_A0147 17a86e984eff5c2830c9676d59e5428b 341 Gene3D G3DSA:2.40.30.170 223 340 7.6E-34 T 12-10-2018 Vc3S01_A0147 17a86e984eff5c2830c9676d59e5428b 341 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 52 284 3.5E-13 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Vc3S01_A0147 17a86e984eff5c2830c9676d59e5428b 341 SUPERFAMILY SSF111369 119 174 3.14E-6 T 12-10-2018 Vc3S01_A0147 17a86e984eff5c2830c9676d59e5428b 341 Gene3D G3DSA:2.40.50.100 54 86 7.1E-10 T 12-10-2018 Vc3S01_A0147 17a86e984eff5c2830c9676d59e5428b 341 SUPERFAMILY SSF111369 185 264 4.05E-12 T 12-10-2018 Vc3S01_A0147 17a86e984eff5c2830c9676d59e5428b 341 Gene3D G3DSA:1.10.287.470 116 173 3.9E-5 T 12-10-2018 Vc3S01_A0147 17a86e984eff5c2830c9676d59e5428b 341 Gene3D G3DSA:1.10.287.470 87 114 7.1E-10 T 12-10-2018 Vc3S01_A0147 17a86e984eff5c2830c9676d59e5428b 341 SUPERFAMILY SSF111369 52 128 6.93E-9 T 12-10-2018 Vc3S01_0191 3c51d91ad1b035a13dd58d0012807b6f 295 Gene3D G3DSA:3.40.50.150 102 294 6.9E-58 T 12-10-2018 Vc3S01_0191 3c51d91ad1b035a13dd58d0012807b6f 295 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 293 6.4E-106 T 12-10-2018 Vc3S01_0191 3c51d91ad1b035a13dd58d0012807b6f 295 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 293 33.986 T 12-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 Vc3S01_0191 3c51d91ad1b035a13dd58d0012807b6f 295 PIRSF PIRSF000401 1 295 2.8E-100 T 12-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 Vc3S01_0191 3c51d91ad1b035a13dd58d0012807b6f 295 SUPERFAMILY SSF53335 43 273 3.55E-46 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Vc3S01_0191 3c51d91ad1b035a13dd58d0012807b6f 295 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 287 1.9E-110 T 12-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 Vc3S01_A1872 b862d92a9ac7239194a75a5efdc5b35d 407 Gene3D G3DSA:1.10.3860.10 5 407 5.3E-72 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 Vc3S01_A1872 b862d92a9ac7239194a75a5efdc5b35d 407 Pfam PF00375 Sodium:dicarboxylate symporter family 17 400 1.1E-66 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Vc3S01_A1872 b862d92a9ac7239194a75a5efdc5b35d 407 SUPERFAMILY SSF118215 17 402 1.31E-97 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 Vc3S01_A1872 b862d92a9ac7239194a75a5efdc5b35d 407 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 5 406 36.608 T 12-10-2018 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 Vc3S01_A1872 b862d92a9ac7239194a75a5efdc5b35d 407 PRINTS PR00173 Glutamate-aspartate symporter signature 222 241 2.8E-12 T 12-10-2018 Vc3S01_A1872 b862d92a9ac7239194a75a5efdc5b35d 407 PRINTS PR00173 Glutamate-aspartate symporter signature 289 315 2.8E-12 T 12-10-2018 Vc3S01_A1872 b862d92a9ac7239194a75a5efdc5b35d 407 PRINTS PR00173 Glutamate-aspartate symporter signature 324 343 2.8E-12 T 12-10-2018 Vc3S01_A1872 b862d92a9ac7239194a75a5efdc5b35d 407 PRINTS PR00173 Glutamate-aspartate symporter signature 187 206 2.8E-12 T 12-10-2018 Vc3S01_A1872 b862d92a9ac7239194a75a5efdc5b35d 407 PRINTS PR00173 Glutamate-aspartate symporter signature 15 35 2.8E-12 T 12-10-2018 Vc3S01_A0889 b8efeabe18ae7fcc21b360eec483d1e1 391 SUPERFAMILY SSF51395 24 376 5.64E-100 T 12-10-2018 Vc3S01_A0889 b8efeabe18ae7fcc21b360eec483d1e1 391 Gene3D G3DSA:3.20.20.70 29 390 2.8E-110 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_A0889 b8efeabe18ae7fcc21b360eec483d1e1 391 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 31 364 2.2E-67 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 Vc3S01_0816 c033bb11f0f6d4b3219fe96b7f34613c 216 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 10 216 44.394 T 12-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 Vc3S01_0816 c033bb11f0f6d4b3219fe96b7f34613c 216 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 10 216 7.2E-92 T 12-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 Vc3S01_0816 c033bb11f0f6d4b3219fe96b7f34613c 216 SUPERFAMILY SSF53271 11 214 1.57E-66 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like Vc3S01_0816 c033bb11f0f6d4b3219fe96b7f34613c 216 Gene3D G3DSA:3.40.50.2020 9 216 2.0E-73 T 12-10-2018 Vc3S01_0816 c033bb11f0f6d4b3219fe96b7f34613c 216 Pfam PF14681 Uracil phosphoribosyltransferase 15 215 1.3E-64 T 12-10-2018 Vc3S01_1169 e332af1df1de155b9f904c69e081d00e 418 Gene3D G3DSA:1.10.287.130 163 279 3.2E-20 T 12-10-2018 Vc3S01_1169 e332af1df1de155b9f904c69e081d00e 418 Gene3D G3DSA:3.30.565.10 288 417 2.7E-13 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_1169 e332af1df1de155b9f904c69e081d00e 418 SUPERFAMILY SSF47384 196 278 5.49E-17 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Vc3S01_1169 e332af1df1de155b9f904c69e081d00e 418 SMART SM00387 322 412 1.1E-9 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_1169 e332af1df1de155b9f904c69e081d00e 418 Pfam PF00512 His Kinase A (phospho-acceptor) domain 215 276 1.0E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_1169 e332af1df1de155b9f904c69e081d00e 418 SMART SM00388 213 278 1.7E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Vc3S01_1169 e332af1df1de155b9f904c69e081d00e 418 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 327 408 2.1E-7 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_1169 e332af1df1de155b9f904c69e081d00e 418 SUPERFAMILY SSF55874 269 408 4.58E-16 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_A0334 bed988b0f62742379b582dba739201ac 133 Gene3D G3DSA:3.90.1590.10 1 121 1.2E-20 T 12-10-2018 Vc3S01_A0334 bed988b0f62742379b582dba739201ac 133 SUPERFAMILY SSF51316 2 132 1.88E-43 T 12-10-2018 IPR011057 Mss4-like superfamily Vc3S01_A0334 bed988b0f62742379b582dba739201ac 133 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 26 112 8.3E-20 T 12-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 Vc3S01_A1890 237feb4ac2121f3c0ccf660a53a75186 289 Pfam PF08543 Phosphomethylpyrimidine kinase 75 260 9.0E-21 T 12-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 Vc3S01_A1890 237feb4ac2121f3c0ccf660a53a75186 289 Gene3D G3DSA:3.40.1190.20 1 288 1.8E-86 T 12-10-2018 IPR029056 Ribokinase-like Vc3S01_A1890 237feb4ac2121f3c0ccf660a53a75186 289 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 1 284 3.6E-102 T 12-10-2018 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-6798695|Reactome: R-HSA-964975 Vc3S01_A1890 237feb4ac2121f3c0ccf660a53a75186 289 SUPERFAMILY SSF53613 2 275 1.22E-68 T 12-10-2018 IPR029056 Ribokinase-like Vc3S01_A1890 237feb4ac2121f3c0ccf660a53a75186 289 Hamap MF_01639 Pyridoxal kinase PdxY [pdxY]. 1 284 52.963 T 12-10-2018 IPR023685 Pyridoxal kinase PdxY GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282 Vc3S01_A0406 c3f7cbebb86efca7a7d88cbe0da3b3c3 368 SUPERFAMILY SSF51419 13 249 9.01E-41 T 12-10-2018 IPR029066 PLP-binding barrel Vc3S01_A0406 c3f7cbebb86efca7a7d88cbe0da3b3c3 368 Gene3D G3DSA:3.20.20.10 15 240 1.0E-110 T 12-10-2018 IPR029066 PLP-binding barrel Vc3S01_A0406 c3f7cbebb86efca7a7d88cbe0da3b3c3 368 Pfam PF01168 Alanine racemase, N-terminal domain 13 242 2.2E-26 T 12-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Vc3S01_A0406 c3f7cbebb86efca7a7d88cbe0da3b3c3 368 Pfam PF14031 Putative serine dehydratase domain 263 350 6.6E-21 T 12-10-2018 IPR026956 D-serine dehydratase-like domain Vc3S01_A0406 c3f7cbebb86efca7a7d88cbe0da3b3c3 368 SMART SM01119 263 351 2.4E-28 T 12-10-2018 IPR026956 D-serine dehydratase-like domain Vc3S01_A0406 c3f7cbebb86efca7a7d88cbe0da3b3c3 368 Gene3D G3DSA:2.40.37.20 6 364 1.0E-110 T 12-10-2018 Vc3S01_2151 2d1bc4f3949f74f67133c35f8b723b1b 349 TIGRFAM TIGR01404 FlhB_rel_III: type III secretion protein, YscU/HrpY family 3 343 1.3E-132 T 12-10-2018 IPR006307 Type III exporter system, secretion apparatus protein BsaZ GO:0009306|GO:0016021 Vc3S01_2151 2d1bc4f3949f74f67133c35f8b723b1b 349 SUPERFAMILY SSF160544 238 345 6.54E-33 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal Vc3S01_2151 2d1bc4f3949f74f67133c35f8b723b1b 349 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 202 220 7.1E-44 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Vc3S01_2151 2d1bc4f3949f74f67133c35f8b723b1b 349 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 222 239 7.1E-44 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Vc3S01_2151 2d1bc4f3949f74f67133c35f8b723b1b 349 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 296 317 7.1E-44 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Vc3S01_2151 2d1bc4f3949f74f67133c35f8b723b1b 349 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 266 281 7.1E-44 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Vc3S01_2151 2d1bc4f3949f74f67133c35f8b723b1b 349 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 6 28 7.1E-44 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Vc3S01_2151 2d1bc4f3949f74f67133c35f8b723b1b 349 Gene3D G3DSA:3.40.1690.10 211 349 1.2E-54 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal Vc3S01_2151 2d1bc4f3949f74f67133c35f8b723b1b 349 Pfam PF01312 FlhB HrpN YscU SpaS Family 3 341 1.0E-113 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Vc3S01_A1091 3ab9b07bcdd4f620c22e87f522e02657 818 Pfam PF02687 FtsX-like permease family 729 812 4.0E-6 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Vc3S01_2881 49ab3cd8a40365205ec26c30a9df5eb1 145 Pfam PF00582 Universal stress protein family 1 142 4.4E-33 T 12-10-2018 IPR006016 UspA Vc3S01_2881 49ab3cd8a40365205ec26c30a9df5eb1 145 PIRSF PIRSF006276 1 145 1.8E-19 T 12-10-2018 IPR006015 Universal stress protein A Vc3S01_2881 49ab3cd8a40365205ec26c30a9df5eb1 145 Gene3D G3DSA:3.40.50.620 1 142 9.6E-37 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Vc3S01_2881 49ab3cd8a40365205ec26c30a9df5eb1 145 PRINTS PR01438 Universal stress protein signature 102 114 1.5E-11 T 12-10-2018 IPR006015 Universal stress protein A Vc3S01_2881 49ab3cd8a40365205ec26c30a9df5eb1 145 PRINTS PR01438 Universal stress protein signature 2 20 1.5E-11 T 12-10-2018 IPR006015 Universal stress protein A Vc3S01_2881 49ab3cd8a40365205ec26c30a9df5eb1 145 PRINTS PR01438 Universal stress protein signature 120 142 1.5E-11 T 12-10-2018 IPR006015 Universal stress protein A Vc3S01_2881 49ab3cd8a40365205ec26c30a9df5eb1 145 SUPERFAMILY SSF52402 2 143 6.28E-35 T 12-10-2018 Vc3S01_A0566 35c8dbda7562f6e1071549c348523d7a 176 Gene3D G3DSA:2.30.110.10 12 176 1.8E-54 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Vc3S01_A0566 35c8dbda7562f6e1071549c348523d7a 176 PIRSF PIRSF004633 1 176 8.0E-78 T 12-10-2018 IPR014419 Heme utilization protein with pyridoxamine 5'-phosphate domain Vc3S01_A0566 35c8dbda7562f6e1071549c348523d7a 176 TIGRFAM TIGR04110 heme_HutZ: heme utilization protein HutZ 4 171 7.4E-91 T 12-10-2018 IPR014419 Heme utilization protein with pyridoxamine 5'-phosphate domain Vc3S01_A0566 35c8dbda7562f6e1071549c348523d7a 176 SUPERFAMILY SSF50475 12 162 7.67E-35 T 12-10-2018 Vc3S01_A0566 35c8dbda7562f6e1071549c348523d7a 176 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 15 105 4.4E-18 T 12-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Vc3S01_2968 5ff66c9a1127fccb964592840a29c2bf 415 Pfam PF01943 Polysaccharide biosynthesis protein 7 246 7.0E-12 T 12-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 Vc3S01_2968 5ff66c9a1127fccb964592840a29c2bf 415 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 317 401 1.1E-11 T 12-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain Vc3S01_1910 f667227f16a8280cf6672944426f58aa 326 Gene3D G3DSA:1.25.40.10 22 194 3.0E-15 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_1910 f667227f16a8280cf6672944426f58aa 326 Gene3D G3DSA:1.10.287.110 260 326 3.0E-12 T 12-10-2018 IPR036869 Chaperone J-domain superfamily Vc3S01_1910 f667227f16a8280cf6672944426f58aa 326 SUPERFAMILY SSF46565 270 323 7.98E-13 T 12-10-2018 IPR036869 Chaperone J-domain superfamily Vc3S01_1910 f667227f16a8280cf6672944426f58aa 326 SUPERFAMILY SSF81901 30 143 2.22E-11 T 12-10-2018 Vc3S01_1910 f667227f16a8280cf6672944426f58aa 326 SMART SM00671 64 99 0.44 T 12-10-2018 IPR006597 Sel1-like repeat Vc3S01_1910 f667227f16a8280cf6672944426f58aa 326 SMART SM00671 29 63 14.0 T 12-10-2018 IPR006597 Sel1-like repeat Vc3S01_0203 e7b52db27d16010a96048badf0d8843f 575 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 7 566 6.2E-258 T 12-10-2018 IPR019899 Sodium/solute symporter, VC2705 subfamily Vc3S01_0203 e7b52db27d16010a96048badf0d8843f 575 Pfam PF00474 Sodium:solute symporter family 33 296 3.9E-36 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Vc3S01_0203 e7b52db27d16010a96048badf0d8843f 575 Pfam PF00474 Sodium:solute symporter family 376 491 5.3E-16 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Vc3S01_0203 e7b52db27d16010a96048badf0d8843f 575 Gene3D G3DSA:1.20.1730.10 346 555 1.3E-26 T 12-10-2018 IPR038377 Sodium/glucose symporter superfamily Vc3S01_0203 e7b52db27d16010a96048badf0d8843f 575 Gene3D G3DSA:1.20.1730.10 21 328 5.5E-35 T 12-10-2018 IPR038377 Sodium/glucose symporter superfamily Vc3S01_2640 837a3c468d54172293f1e78ba1c68945 127 SUPERFAMILY SSF82649 1 125 7.06E-48 T 12-10-2018 Vc3S01_2640 837a3c468d54172293f1e78ba1c68945 127 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 2.4E-69 T 12-10-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 Vc3S01_2640 837a3c468d54172293f1e78ba1c68945 127 Pfam PF01592 NifU-like N terminal domain 2 126 1.2E-56 T 12-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 Vc3S01_2640 837a3c468d54172293f1e78ba1c68945 127 Gene3D G3DSA:3.90.1010.10 1 127 6.3E-59 T 12-10-2018 Vc3S01_1936 32511a257f1804d6ac385e86be4a4e76 337 Gene3D G3DSA:1.10.260.40 1 66 7.1E-9 T 12-10-2018 Vc3S01_1936 32511a257f1804d6ac385e86be4a4e76 337 SUPERFAMILY SSF47413 2 65 1.04E-6 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Vc3S01_2978 17034c6479de6a1750953e516a4aa1ea 421 Pfam PF04230 Polysaccharide pyruvyl transferase 56 336 7.3E-20 T 12-10-2018 IPR007345 Polysaccharide pyruvyl transferase Vc3S01_p30020 482b9be3ddb4656947a8306c1a75aaa8 141 Gene3D G3DSA:1.10.10.60 35 76 1.2E-5 T 12-10-2018 Vc3S01_2964 93f844fe64accf8020f6c7d546649032 345 SUPERFAMILY SSF53756 33 345 1.17E-34 T 12-10-2018 Vc3S01_2964 93f844fe64accf8020f6c7d546649032 345 Gene3D G3DSA:3.40.50.2000 32 341 4.5E-32 T 12-10-2018 Vc3S01_2964 93f844fe64accf8020f6c7d546649032 345 Gene3D G3DSA:3.40.50.2000 169 328 4.5E-32 T 12-10-2018 Vc3S01_2964 93f844fe64accf8020f6c7d546649032 345 Pfam PF13692 Glycosyl transferases group 1 186 310 2.0E-11 T 12-10-2018 Vc3S01_2964 93f844fe64accf8020f6c7d546649032 345 Pfam PF13439 Glycosyltransferase Family 4 35 171 4.6E-12 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Vc3S01_A1753 4032a7c97f1810c16c1e4e3106bbe067 295 SUPERFAMILY SSF103481 187 283 4.45E-17 T 12-10-2018 Vc3S01_A1753 4032a7c97f1810c16c1e4e3106bbe067 295 SUPERFAMILY SSF103481 38 137 1.19E-15 T 12-10-2018 Vc3S01_A1753 4032a7c97f1810c16c1e4e3106bbe067 295 Pfam PF00892 EamA-like transporter family 9 136 3.3E-17 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Vc3S01_A1753 4032a7c97f1810c16c1e4e3106bbe067 295 Pfam PF00892 EamA-like transporter family 155 281 5.5E-20 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Vc3S01_A1693 fa6f6ed90ce6d74f6cb6aebaf78ceaf6 165 Pfam PF16964 Putative tight adherence pilin protein F 3 145 1.4E-10 T 12-10-2018 IPR031582 Putative tight adherence pilin protein F Vc3S01_0102 c0e1a6be8c834407b7c6b9dd1b2ff410 120 Pfam PF01878 EVE domain 1 111 5.5E-37 T 12-10-2018 IPR002740 EVE domain Vc3S01_0102 c0e1a6be8c834407b7c6b9dd1b2ff410 120 Gene3D G3DSA:3.10.590.10 1 117 2.6E-44 T 12-10-2018 Vc3S01_0102 c0e1a6be8c834407b7c6b9dd1b2ff410 120 SUPERFAMILY SSF88697 2 113 1.33E-42 T 12-10-2018 IPR015947 PUA-like superfamily Vc3S01_1676 f1a35eb660036e4aec256dd821ed9276 350 Gene3D G3DSA:1.20.950.20 118 336 1.1E-65 T 12-10-2018 Vc3S01_1676 f1a35eb660036e4aec256dd821ed9276 350 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 122 326 3.0E-84 T 12-10-2018 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 Vc3S01_1676 f1a35eb660036e4aec256dd821ed9276 350 SUPERFAMILY SSF81342 119 333 2.67E-46 T 12-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 Vc3S01_1676 f1a35eb660036e4aec256dd821ed9276 350 Pfam PF01292 Prokaryotic cytochrome b561 125 306 1.1E-25 T 12-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 Vc3S01_A1303 f8f2b73fe1ae20e8684d90e4d76cb1a9 692 SUPERFAMILY SSF69349 444 683 1.73E-48 T 12-10-2018 Vc3S01_A1303 f8f2b73fe1ae20e8684d90e4d76cb1a9 692 Gene3D G3DSA:2.30.110.50 15 332 1.4E-95 T 12-10-2018 Vc3S01_A1303 f8f2b73fe1ae20e8684d90e4d76cb1a9 692 Gene3D G3DSA:2.40.50.230 359 458 4.9E-42 T 12-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily Vc3S01_A1303 f8f2b73fe1ae20e8684d90e4d76cb1a9 692 Gene3D G3DSA:3.30.1920.30 229 288 1.4E-95 T 12-10-2018 Vc3S01_A1303 f8f2b73fe1ae20e8684d90e4d76cb1a9 692 SUPERFAMILY SSF69279 201 367 2.3E-32 T 12-10-2018 Vc3S01_A1303 f8f2b73fe1ae20e8684d90e4d76cb1a9 692 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 19 505 5.5E-129 T 12-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein Vc3S01_A1303 f8f2b73fe1ae20e8684d90e4d76cb1a9 692 SUPERFAMILY SSF69255 367 454 9.15E-32 T 12-10-2018 Vc3S01_A1303 f8f2b73fe1ae20e8684d90e4d76cb1a9 692 SUPERFAMILY SSF69279 7 183 4.17E-58 T 12-10-2018 Vc3S01_A1303 f8f2b73fe1ae20e8684d90e4d76cb1a9 692 Pfam PF05954 Phage late control gene D protein (GPD) 26 331 1.4E-79 T 12-10-2018 Vc3S01_A1303 f8f2b73fe1ae20e8684d90e4d76cb1a9 692 Gene3D G3DSA:3.55.50.10 96 187 1.4E-95 T 12-10-2018 Vc3S01_A1303 f8f2b73fe1ae20e8684d90e4d76cb1a9 692 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 7 522 5.9E-200 T 12-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset Vc3S01_A0226 cf466daa76de5b22c71d66c43c64e6ac 289 Gene3D G3DSA:3.40.50.1980 70 187 1.5E-6 T 12-10-2018 Vc3S01_A0226 cf466daa76de5b22c71d66c43c64e6ac 289 SUPERFAMILY SSF53807 26 273 9.32E-20 T 12-10-2018 Vc3S01_1961 691e8b35240772c4f97846ad7a019983 223 SMART SM00382 30 218 2.7E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_1961 691e8b35240772c4f97846ad7a019983 223 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_1961 691e8b35240772c4f97846ad7a019983 223 SUPERFAMILY SSF52540 1 217 6.31E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_1961 691e8b35240772c4f97846ad7a019983 223 Pfam PF00005 ABC transporter 21 167 1.0E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_1961 691e8b35240772c4f97846ad7a019983 223 Gene3D G3DSA:3.40.50.300 1 223 8.5E-58 T 12-10-2018 Vc3S01_A0743 de08a93405b3a2fa444c966c8a4e1da3 287 PIRSF PIRSF028200 13 287 3.9E-91 T 12-10-2018 IPR016875 Uncharacterised conserved protein UCP028200 Vc3S01_0281 5ca8aa19f6c0f0dda0eb0f68ba85d248 66 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 2 60 5.0E-32 T 12-10-2018 IPR012658 Conserved hypothetical protein CHP02443 Vc3S01_0281 5ca8aa19f6c0f0dda0eb0f68ba85d248 66 Pfam PF09526 Probable metal-binding protein (DUF2387) 4 53 5.1E-21 T 12-10-2018 IPR012658 Conserved hypothetical protein CHP02443 Vc3S01_A0558 3b967efb527f1d7033fd81d40c23604f 260 SMART SM00382 30 219 5.9E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_A0558 3b967efb527f1d7033fd81d40c23604f 260 Gene3D G3DSA:3.40.50.300 1 259 1.8E-63 T 12-10-2018 Vc3S01_A0558 3b967efb527f1d7033fd81d40c23604f 260 SUPERFAMILY SSF52540 3 236 1.86E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A0558 3b967efb527f1d7033fd81d40c23604f 260 Pfam PF00005 ABC transporter 21 170 4.9E-26 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_A1844 aeb18a740cf45eda7216ca8d18f37ec4 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 45 61 1.2E-21 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 Vc3S01_A1844 aeb18a740cf45eda7216ca8d18f37ec4 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 117 132 1.2E-21 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 Vc3S01_A1844 aeb18a740cf45eda7216ca8d18f37ec4 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 79 94 1.2E-21 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 Vc3S01_A1844 aeb18a740cf45eda7216ca8d18f37ec4 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 101 114 1.2E-21 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 Vc3S01_A1844 aeb18a740cf45eda7216ca8d18f37ec4 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 5 22 1.2E-21 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 Vc3S01_A1844 aeb18a740cf45eda7216ca8d18f37ec4 146 SUPERFAMILY SSF52788 3 146 2.22E-38 T 12-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily Vc3S01_A1844 aeb18a740cf45eda7216ca8d18f37ec4 146 Gene3D G3DSA:3.40.50.2300 1 146 1.7E-47 T 12-10-2018 Vc3S01_A1844 aeb18a740cf45eda7216ca8d18f37ec4 146 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 5 142 2.9E-34 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I Vc3S01_A1844 aeb18a740cf45eda7216ca8d18f37ec4 146 SMART SM00226 3 145 6.4E-46 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I Vc3S01_1809 af3589d70d74cec73903c3e4463756ab 373 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 11 133 2.8E-24 T 12-10-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 Vc3S01_1809 af3589d70d74cec73903c3e4463756ab 373 Gene3D G3DSA:1.20.120.50 4 140 3.7E-28 T 12-10-2018 IPR035938 Hemerythrin-like superfamily Vc3S01_1809 af3589d70d74cec73903c3e4463756ab 373 SUPERFAMILY SSF55073 211 369 7.22E-34 T 12-10-2018 IPR029787 Nucleotide cyclase Vc3S01_1809 af3589d70d74cec73903c3e4463756ab 373 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 202 369 6.1E-40 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_1809 af3589d70d74cec73903c3e4463756ab 373 SMART SM00267 195 371 2.4E-40 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_1809 af3589d70d74cec73903c3e4463756ab 373 Gene3D G3DSA:3.30.70.270 191 370 6.0E-44 T 12-10-2018 Vc3S01_1809 af3589d70d74cec73903c3e4463756ab 373 Pfam PF00990 Diguanylate cyclase, GGDEF domain 206 367 2.8E-35 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_1809 af3589d70d74cec73903c3e4463756ab 373 SUPERFAMILY SSF47188 7 132 2.22E-22 T 12-10-2018 IPR035938 Hemerythrin-like superfamily Vc3S01_A0766 ef424c151145af9e24bc0fd117fbb283 372 SUPERFAMILY SSF56935 10 372 2.2E-5 T 12-10-2018 Vc3S01_A1525 53edbc1c2b33b85c84f8ebcceb057e46 113 SUPERFAMILY SSF46785 17 104 2.38E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A1525 53edbc1c2b33b85c84f8ebcceb057e46 113 Pfam PF01022 Bacterial regulatory protein, arsR family 35 84 6.8E-12 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Vc3S01_A1525 53edbc1c2b33b85c84f8ebcceb057e46 113 Gene3D G3DSA:1.10.10.10 7 108 9.4E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A1525 53edbc1c2b33b85c84f8ebcceb057e46 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 30 45 8.4E-8 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Vc3S01_A1525 53edbc1c2b33b85c84f8ebcceb057e46 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 66 81 8.4E-8 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Vc3S01_A1525 53edbc1c2b33b85c84f8ebcceb057e46 113 SMART SM00418 28 106 8.5E-11 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Vc3S01_0047 0fc324f80f42e63cb8af75bc9091dca9 465 Pfam PF02386 Cation transport protein 19 457 3.7E-89 T 12-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 Vc3S01_0047 0fc324f80f42e63cb8af75bc9091dca9 465 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 65 448 3.3E-117 T 12-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 Vc3S01_0047 0fc324f80f42e63cb8af75bc9091dca9 465 PIRSF PIRSF006247 1 465 3.1E-172 T 12-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 Vc3S01_p10079 cc854d18021c6c5ef41c447d6ed1e342 435 TIGRFAM TIGR02783 TrbL_P: P-type conjugative transfer protein TrbL 18 306 1.1E-71 T 12-10-2018 IPR014150 Conjugal transfer, TrbL Vc3S01_p10079 cc854d18021c6c5ef41c447d6ed1e342 435 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 56 258 4.1E-24 T 12-10-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 Vc3S01_2420 b07deaf14e11de14bb380584fdb9f8d9 462 Gene3D G3DSA:1.20.1250.20 2 209 2.6E-67 T 12-10-2018 Vc3S01_2420 b07deaf14e11de14bb380584fdb9f8d9 462 Pfam PF00854 POT family 231 405 3.9E-31 T 12-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 Vc3S01_2420 b07deaf14e11de14bb380584fdb9f8d9 462 Pfam PF00854 POT family 85 197 2.2E-29 T 12-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 Vc3S01_2420 b07deaf14e11de14bb380584fdb9f8d9 462 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 153 165 - T 12-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 Vc3S01_2420 b07deaf14e11de14bb380584fdb9f8d9 462 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 6 214 1.1E-58 T 12-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 Vc3S01_2420 b07deaf14e11de14bb380584fdb9f8d9 462 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 225 440 6.1E-47 T 12-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 Vc3S01_2420 b07deaf14e11de14bb380584fdb9f8d9 462 SUPERFAMILY SSF103473 7 435 3.92E-42 T 12-10-2018 IPR036259 MFS transporter superfamily Vc3S01_2420 b07deaf14e11de14bb380584fdb9f8d9 462 Gene3D G3DSA:1.20.1250.20 212 455 6.3E-61 T 12-10-2018 Vc3S01_p20003 57ecc2aaabac7570d4a27cef65d783dc 244 Gene3D G3DSA:1.10.443.10 2 206 3.7E-6 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Vc3S01_p20003 57ecc2aaabac7570d4a27cef65d783dc 244 SUPERFAMILY SSF56349 4 100 5.3E-6 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Vc3S01_A0788 b77b6bcd36020abcacc134e9650153e8 71 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 15 68 5.0E-8 T 12-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor Vc3S01_A0788 b77b6bcd36020abcacc134e9650153e8 71 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 4 68 2.7E-31 T 12-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor Vc3S01_A1071 6e09bbb4f1edf4835a0b48b44f0c8f2f 305 Pfam PF02574 Homocysteine S-methyltransferase 10 300 4.9E-56 T 12-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 Vc3S01_A1071 6e09bbb4f1edf4835a0b48b44f0c8f2f 305 SUPERFAMILY SSF82282 5 304 1.31E-72 T 12-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 Vc3S01_A1071 6e09bbb4f1edf4835a0b48b44f0c8f2f 305 Gene3D G3DSA:3.20.20.330 2 304 4.9E-64 T 12-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 Vc3S01_A1071 6e09bbb4f1edf4835a0b48b44f0c8f2f 305 PIRSF PIRSF037505 5 303 3.2E-13 T 12-10-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 Vc3S01_1438 ff711896e804071c83fc3dba520df89f 646 SUPERFAMILY SSF56300 156 538 1.28E-12 T 12-10-2018 Vc3S01_1438 ff711896e804071c83fc3dba520df89f 646 Gene3D G3DSA:3.60.21.70 315 564 1.0E-10 T 12-10-2018 IPR038607 PhoD-like superfamily Vc3S01_1438 ff711896e804071c83fc3dba520df89f 646 Pfam PF09423 PhoD-like phosphatase 318 560 1.8E-6 T 12-10-2018 IPR018946 Alkaline phosphatase D-related Vc3S01_A0980 40a96f8c41789506c5c65f46ca6c8b3b 167 PIRSF PIRSF011443 1 167 3.5E-55 T 12-10-2018 IPR026267 Inner membrane protein YgjV Vc3S01_A0980 40a96f8c41789506c5c65f46ca6c8b3b 167 Pfam PF10688 Bacterial inner membrane protein 6 162 1.9E-44 T 12-10-2018 IPR019629 Uncharacterised protein family HI1736/YgjV Vc3S01_A2000 c10d9bb6699e7bc48bac3bdf5f4a3dec 178 Pfam PF13577 SnoaL-like domain 10 138 1.0E-21 T 12-10-2018 IPR037401 SnoaL-like domain Vc3S01_A2000 c10d9bb6699e7bc48bac3bdf5f4a3dec 178 SUPERFAMILY SSF54427 3 175 8.02E-35 T 12-10-2018 IPR032710 NTF2-like domain superfamily Vc3S01_A2000 c10d9bb6699e7bc48bac3bdf5f4a3dec 178 Gene3D G3DSA:3.10.450.50 11 153 1.4E-33 T 12-10-2018 Vc3S01_A1008 3e488c6fc21508e65f311fe94c1bb4f4 787 Gene3D G3DSA:3.30.1120.10 511 605 4.8E-18 T 12-10-2018 Vc3S01_A1008 3e488c6fc21508e65f311fe94c1bb4f4 787 Pfam PF00884 Sulfatase 64 481 1.1E-80 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 Vc3S01_A1008 3e488c6fc21508e65f311fe94c1bb4f4 787 ProSitePatterns PS00523 Sulfatases signature 1. 108 120 - T 12-10-2018 IPR024607 Sulfatase, conserved site Vc3S01_A1008 3e488c6fc21508e65f311fe94c1bb4f4 787 SUPERFAMILY SSF53649 64 599 5.52E-127 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Vc3S01_A1008 3e488c6fc21508e65f311fe94c1bb4f4 787 Gene3D G3DSA:3.40.720.10 61 508 1.4E-108 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Vc3S01_2227 93b8bd17d8e1be3e3617d32040a0c365 82 Pfam PF10692 Protein of unknown function (DUF2498) 4 80 3.3E-42 T 12-10-2018 IPR019633 Protein of unknown function DUF2498 Vc3S01_2227 93b8bd17d8e1be3e3617d32040a0c365 82 Gene3D G3DSA:1.10.1900.30 8 76 2.0E-36 T 12-10-2018 IPR038191 YciN superfamily Vc3S01_0941 686642406a94a3b98e9f2e3c12bb61b1 98 Pfam PF13467 Ribbon-helix-helix domain 16 82 6.8E-24 T 12-10-2018 IPR027373 Ribbon-helix-helix domain Vc3S01_0941 686642406a94a3b98e9f2e3c12bb61b1 98 Gene3D G3DSA:1.10.3990.20 8 97 3.6E-32 T 12-10-2018 IPR038268 Ribbon-helix-helix domain superfamily Vc3S01_2087 763b957e3fbfac8f00ce546e3dd5f565 398 Gene3D G3DSA:3.40.50.150 104 242 3.3E-5 T 12-10-2018 Vc3S01_2087 763b957e3fbfac8f00ce546e3dd5f565 398 SUPERFAMILY SSF53335 115 185 2.18E-5 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Vc3S01_2087 763b957e3fbfac8f00ce546e3dd5f565 398 Pfam PF13679 Methyltransferase domain 107 230 4.1E-18 T 12-10-2018 IPR025714 Methyltransferase domain Vc3S01_A0085 2617f31f7703fb33e27d0efbb7ef1de3 198 SUPERFAMILY SSF48498 84 194 5.78E-17 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Vc3S01_A0085 2617f31f7703fb33e27d0efbb7ef1de3 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 1.6E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Vc3S01_A0085 2617f31f7703fb33e27d0efbb7ef1de3 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 1.6E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Vc3S01_A0085 2617f31f7703fb33e27d0efbb7ef1de3 198 Gene3D G3DSA:1.10.10.60 2 49 2.3E-20 T 12-10-2018 Vc3S01_A0085 2617f31f7703fb33e27d0efbb7ef1de3 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 55 3.6E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Vc3S01_A0085 2617f31f7703fb33e27d0efbb7ef1de3 198 Gene3D G3DSA:1.10.357.10 51 194 3.1E-18 T 12-10-2018 Vc3S01_A0085 2617f31f7703fb33e27d0efbb7ef1de3 198 SUPERFAMILY SSF46689 5 73 6.8E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_1258 e9ec5d44475eec3fd2c69704387e1226 629 SUPERFAMILY SSF51206 7 135 7.46E-30 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like Vc3S01_1258 e9ec5d44475eec3fd2c69704387e1226 629 Pfam PF00027 Cyclic nucleotide-binding domain 37 118 3.9E-15 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain Vc3S01_1258 e9ec5d44475eec3fd2c69704387e1226 629 SMART SM00116 159 216 3.9E-5 T 12-10-2018 IPR000644 CBS domain Vc3S01_1258 e9ec5d44475eec3fd2c69704387e1226 629 SMART SM00116 233 280 7.9E-7 T 12-10-2018 IPR000644 CBS domain Vc3S01_1258 e9ec5d44475eec3fd2c69704387e1226 629 SUPERFAMILY SSF54631 146 279 1.3E-26 T 12-10-2018 Vc3S01_1258 e9ec5d44475eec3fd2c69704387e1226 629 Pfam PF00571 CBS domain 152 214 1.5E-7 T 12-10-2018 IPR000644 CBS domain Vc3S01_1258 e9ec5d44475eec3fd2c69704387e1226 629 Pfam PF00571 CBS domain 226 278 2.1E-10 T 12-10-2018 IPR000644 CBS domain Vc3S01_1258 e9ec5d44475eec3fd2c69704387e1226 629 Gene3D G3DSA:2.60.120.10 1 144 1.4E-25 T 12-10-2018 IPR014710 RmlC-like jelly roll fold Vc3S01_1258 e9ec5d44475eec3fd2c69704387e1226 629 Gene3D G3DSA:3.10.580.10 145 283 9.6E-33 T 12-10-2018 Vc3S01_1258 e9ec5d44475eec3fd2c69704387e1226 629 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 479 622 2.7E-47 T 12-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding Vc3S01_1258 e9ec5d44475eec3fd2c69704387e1226 629 SMART SM00100 17 134 3.2E-9 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain Vc3S01_1258 e9ec5d44475eec3fd2c69704387e1226 629 Pfam PF03445 Putative nucleotidyltransferase DUF294 305 442 3.8E-46 T 12-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 Vc3S01_2003 1b0af6085f63c63265c3213f333dd8dc 310 Gene3D G3DSA:3.40.50.150 86 304 5.0E-46 T 12-10-2018 Vc3S01_2003 1b0af6085f63c63265c3213f333dd8dc 310 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 25 310 3.0E-173 T 12-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 Vc3S01_2003 1b0af6085f63c63265c3213f333dd8dc 310 SUPERFAMILY SSF53335 9 287 2.71E-52 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Vc3S01_A2035 f17d112dbf51efd1a79dcfd5b2edce86 407 Pfam PF02954 Bacterial regulatory protein, Fis family 360 398 1.5E-6 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Vc3S01_A2035 f17d112dbf51efd1a79dcfd5b2edce86 407 Gene3D G3DSA:3.40.50.300 143 276 1.9E-5 T 12-10-2018 Vc3S01_A2035 f17d112dbf51efd1a79dcfd5b2edce86 407 SUPERFAMILY SSF52172 5 187 1.85E-38 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_A2035 f17d112dbf51efd1a79dcfd5b2edce86 407 Gene3D G3DSA:3.40.50.2300 2 136 1.2E-34 T 12-10-2018 Vc3S01_A2035 f17d112dbf51efd1a79dcfd5b2edce86 407 SMART SM00448 3 114 2.6E-31 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A2035 f17d112dbf51efd1a79dcfd5b2edce86 407 Pfam PF00072 Response regulator receiver domain 5 114 1.7E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A2035 f17d112dbf51efd1a79dcfd5b2edce86 407 SUPERFAMILY SSF52540 144 333 2.28E-10 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A2035 f17d112dbf51efd1a79dcfd5b2edce86 407 Gene3D G3DSA:1.10.10.60 347 403 1.2E-7 T 12-10-2018 Vc3S01_A2035 f17d112dbf51efd1a79dcfd5b2edce86 407 SUPERFAMILY SSF46689 349 401 4.3E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_A2035 f17d112dbf51efd1a79dcfd5b2edce86 407 Gene3D G3DSA:1.10.8.60 277 346 2.1E-10 T 12-10-2018 Vc3S01_2825 cfe9eabab90e928bba28a25ce11a98e9 271 Pfam PF00561 alpha/beta hydrolase fold 23 253 1.4E-18 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Vc3S01_2825 cfe9eabab90e928bba28a25ce11a98e9 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 212 226 2.0E-10 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Vc3S01_2825 cfe9eabab90e928bba28a25ce11a98e9 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 45 60 2.0E-10 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Vc3S01_2825 cfe9eabab90e928bba28a25ce11a98e9 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 104 117 2.0E-10 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Vc3S01_2825 cfe9eabab90e928bba28a25ce11a98e9 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 90 103 2.0E-10 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Vc3S01_2825 cfe9eabab90e928bba28a25ce11a98e9 271 SUPERFAMILY SSF53474 2 267 3.0E-58 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_2825 cfe9eabab90e928bba28a25ce11a98e9 271 Gene3D G3DSA:3.40.50.1820 1 271 1.9E-54 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_2825 cfe9eabab90e928bba28a25ce11a98e9 271 PRINTS PR00412 Epoxide hydrolase signature 243 265 6.5E-7 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Vc3S01_2825 cfe9eabab90e928bba28a25ce11a98e9 271 PRINTS PR00412 Epoxide hydrolase signature 94 107 6.5E-7 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Vc3S01_2825 cfe9eabab90e928bba28a25ce11a98e9 271 PRINTS PR00412 Epoxide hydrolase signature 45 60 6.5E-7 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Vc3S01_2789 c0d83be878e7175d69c22b595a681891 196 Pfam PF13580 SIS domain 9 144 3.2E-33 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Vc3S01_2789 c0d83be878e7175d69c22b595a681891 196 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 34.102 T 12-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 Vc3S01_2789 c0d83be878e7175d69c22b595a681891 196 SUPERFAMILY SSF53697 1 191 4.04E-56 T 12-10-2018 Vc3S01_2789 c0d83be878e7175d69c22b595a681891 196 Gene3D G3DSA:3.40.50.10490 1 195 9.8E-72 T 12-10-2018 Vc3S01_p40107 1df1cbb2e59fcc12756a84159981a866 228 SUPERFAMILY SSF101082 29 214 6.02E-20 T 12-10-2018 Vc3S01_p40107 1df1cbb2e59fcc12756a84159981a866 228 Gene3D G3DSA:1.20.58.430 29 215 2.3E-11 T 12-10-2018 IPR023220 Type IV secretion system, VirB5-domain Vc3S01_p40107 1df1cbb2e59fcc12756a84159981a866 228 Pfam PF07996 Type IV secretion system proteins 29 214 2.3E-15 T 12-10-2018 IPR014158 Type IV secretion system, VirB5 Vc3S01_2292 2aa73dbbb0a528312cb6f2826d2e3acc 286 Pfam PF13622 Thioesterase-like superfamily 33 282 5.1E-61 T 12-10-2018 Vc3S01_2292 2aa73dbbb0a528312cb6f2826d2e3acc 286 SUPERFAMILY SSF54637 116 283 1.35E-59 T 12-10-2018 IPR029069 HotDog domain superfamily Vc3S01_2292 2aa73dbbb0a528312cb6f2826d2e3acc 286 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 12 283 2.9E-96 T 12-10-2018 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 Vc3S01_2292 2aa73dbbb0a528312cb6f2826d2e3acc 286 Gene3D G3DSA:3.10.129.90 2 286 8.5E-108 T 12-10-2018 Vc3S01_2292 2aa73dbbb0a528312cb6f2826d2e3acc 286 SUPERFAMILY SSF54637 6 114 9.39E-40 T 12-10-2018 IPR029069 HotDog domain superfamily Vc3S01_A0142 9d32e895bb8be8ccec9a5ce50f5aefa9 470 TIGRFAM TIGR00797 matE: MATE efflux family protein 36 434 1.4E-50 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Vc3S01_A0142 9d32e895bb8be8ccec9a5ce50f5aefa9 470 PIRSF PIRSF006603 11 470 9.9E-58 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Vc3S01_A0142 9d32e895bb8be8ccec9a5ce50f5aefa9 470 Pfam PF01554 MatE 36 196 1.9E-18 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Vc3S01_A0142 9d32e895bb8be8ccec9a5ce50f5aefa9 470 Pfam PF01554 MatE 263 425 2.2E-16 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Vc3S01_0380 a30fb8a7aa436cc8ea30f71d3e439a5c 482 PIRSF PIRSF028153 1 482 2.5E-223 T 12-10-2018 IPR016871 MSHA biogenesis protein, MshI Vc3S01_0380 a30fb8a7aa436cc8ea30f71d3e439a5c 482 SUPERFAMILY SSF53067 45 154 8.55E-10 T 12-10-2018 Vc3S01_A1810 86260d32860504dba977e0079cac4b90 323 Pfam PF03466 LysR substrate binding domain 101 312 5.5E-12 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_A1810 86260d32860504dba977e0079cac4b90 323 SUPERFAMILY SSF53850 98 314 1.28E-24 T 12-10-2018 Vc3S01_A1810 86260d32860504dba977e0079cac4b90 323 Gene3D G3DSA:1.10.10.10 1 90 1.5E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A1810 86260d32860504dba977e0079cac4b90 323 Gene3D G3DSA:3.40.190.10 180 281 2.7E-27 T 12-10-2018 Vc3S01_A1810 86260d32860504dba977e0079cac4b90 323 Gene3D G3DSA:3.40.190.10 99 310 2.7E-27 T 12-10-2018 Vc3S01_A1810 86260d32860504dba977e0079cac4b90 323 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 69 1.9E-13 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A1810 86260d32860504dba977e0079cac4b90 323 SUPERFAMILY SSF46785 6 85 5.44E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_1839 21c7e2e46077fb8d4b5e629fb485d968 342 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 342 135.023 T 12-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 Vc3S01_1839 21c7e2e46077fb8d4b5e629fb485d968 342 Gene3D G3DSA:3.40.630.10 1 342 7.2E-122 T 12-10-2018 Vc3S01_1839 21c7e2e46077fb8d4b5e629fb485d968 342 PIRSF PIRSF017020 4 336 6.0E-127 T 12-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 Vc3S01_1839 21c7e2e46077fb8d4b5e629fb485d968 342 SUPERFAMILY SSF53187 9 329 5.54E-76 T 12-10-2018 Vc3S01_1839 21c7e2e46077fb8d4b5e629fb485d968 342 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 53 330 2.2E-69 T 12-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 Vc3S01_1031 b60195c3ec7bcacd33a7f7814a3e9b5f 293 SUPERFAMILY SSF103088 158 287 4.32E-25 T 12-10-2018 IPR036737 OmpA-like domain superfamily Vc3S01_1031 b60195c3ec7bcacd33a7f7814a3e9b5f 293 Gene3D G3DSA:3.30.1330.60 176 293 3.7E-38 T 12-10-2018 IPR036737 OmpA-like domain superfamily Vc3S01_1031 b60195c3ec7bcacd33a7f7814a3e9b5f 293 Pfam PF00691 OmpA family 187 282 3.9E-18 T 12-10-2018 IPR006665 OmpA-like domain Vc3S01_1031 b60195c3ec7bcacd33a7f7814a3e9b5f 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 104 121 1.2E-164 T 12-10-2018 Vc3S01_1031 b60195c3ec7bcacd33a7f7814a3e9b5f 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 66 84 1.2E-164 T 12-10-2018 Vc3S01_1031 b60195c3ec7bcacd33a7f7814a3e9b5f 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 233 250 1.2E-164 T 12-10-2018 Vc3S01_1031 b60195c3ec7bcacd33a7f7814a3e9b5f 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 45 63 1.2E-164 T 12-10-2018 Vc3S01_1031 b60195c3ec7bcacd33a7f7814a3e9b5f 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 204 230 1.2E-164 T 12-10-2018 Vc3S01_1031 b60195c3ec7bcacd33a7f7814a3e9b5f 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 3 27 1.2E-164 T 12-10-2018 Vc3S01_1031 b60195c3ec7bcacd33a7f7814a3e9b5f 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 28 44 1.2E-164 T 12-10-2018 Vc3S01_1031 b60195c3ec7bcacd33a7f7814a3e9b5f 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 148 167 1.2E-164 T 12-10-2018 Vc3S01_1031 b60195c3ec7bcacd33a7f7814a3e9b5f 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 123 145 1.2E-164 T 12-10-2018 Vc3S01_1031 b60195c3ec7bcacd33a7f7814a3e9b5f 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 271 291 1.2E-164 T 12-10-2018 Vc3S01_1031 b60195c3ec7bcacd33a7f7814a3e9b5f 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 85 103 1.2E-164 T 12-10-2018 Vc3S01_1031 b60195c3ec7bcacd33a7f7814a3e9b5f 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 251 270 1.2E-164 T 12-10-2018 Vc3S01_1031 b60195c3ec7bcacd33a7f7814a3e9b5f 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 174 201 1.2E-164 T 12-10-2018 Vc3S01_1031 b60195c3ec7bcacd33a7f7814a3e9b5f 293 Gene3D G3DSA:2.60.40.2540 22 175 7.0E-57 T 12-10-2018 Vc3S01_2874 e3aad298f1f3d8c38241881c09c62f66 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 1.3E-44 T 12-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_2874 e3aad298f1f3d8c38241881c09c62f66 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 27.497 T 12-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_2874 e3aad298f1f3d8c38241881c09c62f66 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 12-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_2874 e3aad298f1f3d8c38241881c09c62f66 103 SUPERFAMILY SSF141091 1 102 9.94E-39 T 12-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_2874 e3aad298f1f3d8c38241881c09c62f66 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 2.8E-40 T 12-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_1158 eeb04af48bd649827ef1f7fa9f0b8cc1 324 PIRSF PIRSF034367 1 324 1.3E-198 T 12-10-2018 IPR015004 Protein of unknown function DUF1852 Vc3S01_1158 eeb04af48bd649827ef1f7fa9f0b8cc1 324 Pfam PF08908 Domain of unknown function (DUF1852) 1 321 6.2E-186 T 12-10-2018 IPR015004 Protein of unknown function DUF1852 Vc3S01_3052 864ec0aca91418ccb440693b4a50eb9f 163 PIRSF PIRSF006291 2 162 2.1E-40 T 12-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 Vc3S01_3052 864ec0aca91418ccb440693b4a50eb9f 163 Gene3D G3DSA:3.30.1360.100 85 163 6.3E-31 T 12-10-2018 Vc3S01_3052 864ec0aca91418ccb440693b4a50eb9f 163 Pfam PF04612 Type II secretion system (T2SS), protein M 6 162 2.5E-55 T 12-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 Vc3S01_3052 864ec0aca91418ccb440693b4a50eb9f 163 SUPERFAMILY SSF103054 85 162 3.79E-25 T 12-10-2018 IPR023229 Type II secretion system protein M, periplasmic domain superfamily Vc3S01_A1691 927d56b68d69e3d3e375f3d307ea625f 202 SUPERFAMILY SSF103088 93 164 5.36E-6 T 12-10-2018 IPR036737 OmpA-like domain superfamily Vc3S01_2954 798b5291d717179a9af9bee57ab426e3 204 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 46 5.4E-6 T 12-10-2018 Vc3S01_2954 798b5291d717179a9af9bee57ab426e3 204 Gene3D G3DSA:1.10.10.10 2 85 1.3E-9 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_2954 798b5291d717179a9af9bee57ab426e3 204 SUPERFAMILY SSF46785 5 183 1.75E-36 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_1233 e98044865ef393252fc35ae2c198a68a 323 TIGRFAM TIGR03148 cyt_nit_nrfD: cytochrome c nitrite reductase, NrfD subunit 6 323 5.4E-149 T 12-10-2018 IPR017566 NrfD Vc3S01_1233 e98044865ef393252fc35ae2c198a68a 323 Gene3D G3DSA:1.20.1630.10 8 219 1.5E-13 T 12-10-2018 Vc3S01_1233 e98044865ef393252fc35ae2c198a68a 323 Pfam PF03916 Polysulphide reductase, NrfD 6 322 5.1E-81 T 12-10-2018 IPR005614 NrfD family Vc3S01_A0182 21860cf3bd33b7bf3a79347f25e43d10 166 Pfam PF00583 Acetyltransferase (GNAT) family 48 139 3.4E-16 T 12-10-2018 IPR000182 GNAT domain Vc3S01_A0182 21860cf3bd33b7bf3a79347f25e43d10 166 SUPERFAMILY SSF55729 1 162 1.86E-30 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_A0182 21860cf3bd33b7bf3a79347f25e43d10 166 Gene3D G3DSA:3.40.630.30 1 162 2.6E-30 T 12-10-2018 Vc3S01_A0555 97035c05bbd06bb97f97e0629586fed5 90 Pfam PF07383 Protein of unknown function (DUF1496) 35 84 4.3E-22 T 12-10-2018 IPR009971 Protein of unknown function DUF1496 Vc3S01_0522 caab2785faa7ef01b085f0523f7f5747 265 SUPERFAMILY SSF101386 3 105 8.34E-25 T 12-10-2018 Vc3S01_0522 caab2785faa7ef01b085f0523f7f5747 265 TIGRFAM TIGR00444 mazG: MazG family protein 11 260 5.0E-103 T 12-10-2018 IPR011551 NTP pyrophosphohydrolase MazG Vc3S01_0522 caab2785faa7ef01b085f0523f7f5747 265 Gene3D G3DSA:1.10.287.1080 2 126 1.5E-45 T 12-10-2018 Vc3S01_0522 caab2785faa7ef01b085f0523f7f5747 265 Gene3D G3DSA:1.10.287.1080 132 264 2.5E-44 T 12-10-2018 Vc3S01_0522 caab2785faa7ef01b085f0523f7f5747 265 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 28 101 8.5E-28 T 12-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core Vc3S01_0522 caab2785faa7ef01b085f0523f7f5747 265 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 172 231 1.0E-4 T 12-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core Vc3S01_0522 caab2785faa7ef01b085f0523f7f5747 265 SUPERFAMILY SSF101386 138 239 1.4E-22 T 12-10-2018 Vc3S01_0716 1d625eec3ca2ea1e547fa40789726130 343 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 253 285 1.1E-11 T 12-10-2018 IPR001451 Hexapeptide repeat Vc3S01_0716 1d625eec3ca2ea1e547fa40789726130 343 Pfam PF14789 Tetrahydrodipicolinate N-succinyltransferase middle 131 171 2.9E-16 T 12-10-2018 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117 Vc3S01_0716 1d625eec3ca2ea1e547fa40789726130 343 Gene3D G3DSA:3.30.60.70 131 171 1.0E-20 T 12-10-2018 IPR038361 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain superfamily KEGG: 00300+2.3.1.117 Vc3S01_0716 1d625eec3ca2ea1e547fa40789726130 343 Hamap MF_02122 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 2 340 45.983 T 12-10-2018 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family GO:0008666 KEGG: 00300+2.3.1.117 Vc3S01_0716 1d625eec3ca2ea1e547fa40789726130 343 TIGRFAM TIGR03536 DapD_gpp: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 4 343 3.9E-179 T 12-10-2018 IPR019876 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, gammaproteobacteria KEGG: 00300+2.3.1.117 Vc3S01_0716 1d625eec3ca2ea1e547fa40789726130 343 Gene3D G3DSA:2.160.10.10 172 343 1.6E-69 T 12-10-2018 Vc3S01_0716 1d625eec3ca2ea1e547fa40789726130 343 SUPERFAMILY SSF51161 90 324 8.59E-35 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily Vc3S01_0716 1d625eec3ca2ea1e547fa40789726130 343 Gene3D G3DSA:3.30.70.2010 1 130 4.0E-38 T 12-10-2018 Vc3S01_2579 3374a8034cc2977ad254f852354c3db2 356 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 50 317 9.2E-72 T 12-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 Vc3S01_2579 3374a8034cc2977ad254f852354c3db2 356 SUPERFAMILY SSF53187 22 319 3.64E-77 T 12-10-2018 Vc3S01_2579 3374a8034cc2977ad254f852354c3db2 356 PIRSF PIRSF039012 3 325 3.3E-94 T 12-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 Vc3S01_2579 3374a8034cc2977ad254f852354c3db2 356 Gene3D G3DSA:3.40.630.10 15 320 1.6E-92 T 12-10-2018 Vc3S01_3209 9c36b12607d26d98f093390900ce20d9 135 SUPERFAMILY SSF81573 42 100 3.4E-15 T 12-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily Vc3S01_3209 9c36b12607d26d98f093390900ce20d9 135 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 117 9.867 T 12-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 Vc3S01_3209 9c36b12607d26d98f093390900ce20d9 135 Pfam PF00430 ATP synthase B/B' CF(0) 1 116 1.6E-29 T 12-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 Vc3S01_3209 9c36b12607d26d98f093390900ce20d9 135 Gene3D G3DSA:1.20.5.620 41 101 5.2E-24 T 12-10-2018 Vc3S01_3209 9c36b12607d26d98f093390900ce20d9 135 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 1 135 3.5E-51 T 12-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 Vc3S01_2244 2e71e865adcb51b01a7fe2d4fa14bbd4 268 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 267 1.1E-87 T 12-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 Vc3S01_2244 2e71e865adcb51b01a7fe2d4fa14bbd4 268 SUPERFAMILY SSF56219 1 267 3.66E-86 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Vc3S01_2244 2e71e865adcb51b01a7fe2d4fa14bbd4 268 Gene3D G3DSA:3.60.10.10 1 268 9.1E-79 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Vc3S01_2244 2e71e865adcb51b01a7fe2d4fa14bbd4 268 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 260 7.0E-20 T 12-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase Vc3S01_2244 2e71e865adcb51b01a7fe2d4fa14bbd4 268 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 12-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Vc3S01_2244 2e71e865adcb51b01a7fe2d4fa14bbd4 268 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 267 5.0E-101 T 12-10-2018 Vc3S01_A1526 173b70f47ae8331134c7704f2934d1c7 351 PIRSF PIRSF005508 1 351 2.7E-136 T 12-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 Vc3S01_A1526 173b70f47ae8331134c7704f2934d1c7 351 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 13 342 1.1E-137 T 12-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 Vc3S01_A1526 173b70f47ae8331134c7704f2934d1c7 351 Gene3D G3DSA:1.20.1530.20 3 342 4.6E-23 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily Vc3S01_A1526 173b70f47ae8331134c7704f2934d1c7 351 Pfam PF01758 Sodium Bile acid symporter family 58 254 1.2E-61 T 12-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 Vc3S01_A1994 7a0c2a363e8e0fe12011acaa6a94bbd6 230 Pfam PF03473 MOSC domain 49 163 5.7E-22 T 12-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 Vc3S01_A1994 7a0c2a363e8e0fe12011acaa6a94bbd6 230 SUPERFAMILY SSF50800 3 227 2.04E-71 T 12-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily Vc3S01_A1994 7a0c2a363e8e0fe12011acaa6a94bbd6 230 Gene3D G3DSA:2.40.33.20 1 230 5.2E-71 T 12-10-2018 Vc3S01_A1994 7a0c2a363e8e0fe12011acaa6a94bbd6 230 Pfam PF03475 3-alpha domain 173 215 2.9E-11 T 12-10-2018 IPR005163 3-alpha domain Vc3S01_2664 e373baf880e52f054f2cd03dd393afa6 272 SUPERFAMILY SSF52540 22 258 1.77E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2664 e373baf880e52f054f2cd03dd393afa6 272 SMART SM00382 50 252 1.7E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_2664 e373baf880e52f054f2cd03dd393afa6 272 Gene3D G3DSA:3.40.50.300 21 269 1.7E-65 T 12-10-2018 Vc3S01_2664 e373baf880e52f054f2cd03dd393afa6 272 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_2664 e373baf880e52f054f2cd03dd393afa6 272 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 26 272 1.7E-123 T 12-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 Vc3S01_2664 e373baf880e52f054f2cd03dd393afa6 272 Pfam PF00005 ABC transporter 41 197 7.4E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_0775 38869d6b13c8c0ffb80012b685942911 104 Pfam PF04287 tRNA pseudouridine synthase C 7 102 6.1E-36 T 12-10-2018 IPR023376 YqcC-like domain Vc3S01_0775 38869d6b13c8c0ffb80012b685942911 104 SUPERFAMILY SSF158452 1 103 6.41E-38 T 12-10-2018 IPR036814 YqcC-like superfamily Vc3S01_0775 38869d6b13c8c0ffb80012b685942911 104 Gene3D G3DSA:1.20.1440.40 1 104 3.6E-35 T 12-10-2018 IPR036814 YqcC-like superfamily Vc3S01_0775 38869d6b13c8c0ffb80012b685942911 104 PIRSF PIRSF006257 1 104 3.9E-43 T 12-10-2018 IPR007384 Protein of unknown function UCP006257 Vc3S01_0888 9d34f373e31fda0d292e4491ba3c3a84 405 SUPERFAMILY SSF48452 161 265 1.01E-11 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_0888 9d34f373e31fda0d292e4491ba3c3a84 405 Gene3D G3DSA:1.25.40.10 153 292 3.6E-15 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_0888 9d34f373e31fda0d292e4491ba3c3a84 405 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 3 116 6.0E-31 T 12-10-2018 IPR017560 Cytochrome c-type biogenesis protein CcmI Vc3S01_0888 9d34f373e31fda0d292e4491ba3c3a84 405 Pfam PF14559 Tetratricopeptide repeat 176 244 1.2E-7 T 12-10-2018 Vc3S01_1659 5fedf7cbcf5f216ecdb089597278d524 54 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 2 45 7.5E-21 T 12-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type Vc3S01_1659 5fedf7cbcf5f216ecdb089597278d524 54 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 50 7.3E-18 T 12-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type Vc3S01_A0580 26ddb94da5b2da2b782c321b2b5793ce 123 SUPERFAMILY SSF54427 7 117 4.07E-21 T 12-10-2018 IPR032710 NTF2-like domain superfamily Vc3S01_A0580 26ddb94da5b2da2b782c321b2b5793ce 123 Gene3D G3DSA:3.10.450.50 10 118 4.4E-17 T 12-10-2018 Vc3S01_A0580 26ddb94da5b2da2b782c321b2b5793ce 123 Pfam PF12680 SnoaL-like domain 15 93 1.3E-8 T 12-10-2018 IPR037401 SnoaL-like domain Vc3S01_1092 1d9479559c627cfa5aff4b4338581686 316 SUPERFAMILY SSF53901 3 315 3.71E-71 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 Vc3S01_1092 1d9479559c627cfa5aff4b4338581686 316 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 183 1.9E-31 T 12-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Vc3S01_1092 1d9479559c627cfa5aff4b4338581686 316 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 316 1.5E-144 T 12-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Vc3S01_1092 1d9479559c627cfa5aff4b4338581686 316 Gene3D G3DSA:3.40.47.10 1 316 6.9E-128 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 Vc3S01_1092 1d9479559c627cfa5aff4b4338581686 316 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 227 315 1.8E-34 T 12-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Vc3S01_1092 1d9479559c627cfa5aff4b4338581686 316 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 316 72.778 T 12-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Vc3S01_3004 b6d678158d124e685b6af35397c68ad4 315 Pfam PF05686 Glycosyl transferase family 90 136 286 1.7E-18 T 12-10-2018 IPR006598 Lipopolysaccharide-modifying protein Vc3S01_3004 b6d678158d124e685b6af35397c68ad4 315 SMART SM00672 99 305 2.9E-7 T 12-10-2018 IPR006598 Lipopolysaccharide-modifying protein Vc3S01_1005 38b05fea1d30197abb2fe50f214e9c49 117 Pfam PF05713 Bacterial mobilisation protein (MobC) 70 92 5.9E-5 T 12-10-2018 IPR008687 Bacterial mobilisation Vc3S01_1511 f50375fba8a0ed606e768ab025b1cc50 312 Gene3D G3DSA:3.10.310.10 1 310 5.0E-100 T 12-10-2018 Vc3S01_1511 f50375fba8a0ed606e768ab025b1cc50 312 Pfam PF04303 PrpF protein 1 310 1.5E-88 T 12-10-2018 IPR007400 PrpF protein Vc3S01_1511 f50375fba8a0ed606e768ab025b1cc50 312 Gene3D G3DSA:3.10.310.10 128 296 5.0E-100 T 12-10-2018 Vc3S01_1511 f50375fba8a0ed606e768ab025b1cc50 312 SUPERFAMILY SSF54506 133 310 1.41E-52 T 12-10-2018 Vc3S01_1511 f50375fba8a0ed606e768ab025b1cc50 312 SUPERFAMILY SSF54506 1 129 2.59E-45 T 12-10-2018 Vc3S01_0678 b0babee14ec4535a277e51940b19dbab 402 Gene3D G3DSA:3.40.50.300 150 386 1.3E-41 T 12-10-2018 Vc3S01_0678 b0babee14ec4535a277e51940b19dbab 402 SUPERFAMILY SSF52540 152 384 3.9E-29 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0678 b0babee14ec4535a277e51940b19dbab 402 Pfam PF13614 AAA domain 153 308 1.6E-10 T 12-10-2018 IPR025669 AAA domain Vc3S01_A0724 6bbafaef3ef14c41832596e9263beadf 222 Pfam PF08239 Bacterial SH3 domain 74 128 1.8E-6 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type Vc3S01_1694 3fef5ea54f54b4528175d73b7ef9974b 232 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 220 2.6E-8 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Vc3S01_1694 3fef5ea54f54b4528175d73b7ef9974b 232 SUPERFAMILY SSF161098 15 222 5.49E-31 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_1694 3fef5ea54f54b4528175d73b7ef9974b 232 Gene3D G3DSA:1.10.3720.10 2 229 1.4E-27 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_1142 84d120009aa72259df9707fc264d570c 209 Pfam PF13489 Methyltransferase domain 38 183 6.7E-15 T 12-10-2018 Vc3S01_1142 84d120009aa72259df9707fc264d570c 209 Gene3D G3DSA:3.40.50.150 2 195 3.8E-23 T 12-10-2018 Vc3S01_1142 84d120009aa72259df9707fc264d570c 209 SUPERFAMILY SSF53335 5 207 6.6E-29 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Vc3S01_A0214 335e47a15fd81f1fb9e32d087f6b9b5c 134 Gene3D G3DSA:3.30.420.270 61 129 2.7E-11 T 12-10-2018 Vc3S01_A0214 335e47a15fd81f1fb9e32d087f6b9b5c 134 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 132 2.7E-28 T 12-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 Vc3S01_0978 bc291831a4bfa9fa28ed6c7ba9713596 167 Pfam PF11993 Ribosomal S4P (gammaproteobacterial) 1 164 3.1E-63 T 12-10-2018 IPR021879 Ribosomal S4P (gammaproteobacterial) Vc3S01_1630 78dbf4fc4b3ee8e3c4fa8157f2b60ed3 208 SMART SM00945 3 117 8.3E-66 T 12-10-2018 IPR016103 ProQ/FinO domain Vc3S01_1630 78dbf4fc4b3ee8e3c4fa8157f2b60ed3 208 Pfam PF17516 ProQ C-terminal domain 159 207 4.7E-22 T 12-10-2018 IPR035236 RNA chaperone ProQ, C-terminal Vc3S01_1630 78dbf4fc4b3ee8e3c4fa8157f2b60ed3 208 SUPERFAMILY SSF48657 4 117 9.55E-41 T 12-10-2018 IPR036442 ProQ/FinO domain superfamily Vc3S01_1630 78dbf4fc4b3ee8e3c4fa8157f2b60ed3 208 Pfam PF04352 ProQ/FINO family 6 113 1.1E-43 T 12-10-2018 IPR016103 ProQ/FinO domain Vc3S01_1630 78dbf4fc4b3ee8e3c4fa8157f2b60ed3 208 Hamap MF_00749 RNA chaperone ProQ [proQ]. 1 208 30.504 T 12-10-2018 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 Vc3S01_1630 78dbf4fc4b3ee8e3c4fa8157f2b60ed3 208 Gene3D G3DSA:1.10.1710.10 1 117 7.2E-26 T 12-10-2018 IPR036442 ProQ/FinO domain superfamily Vc3S01_0100 4e9167dda319b6e215ded7c7a5380a0e 198 SMART SM01144 1 192 2.5E-55 T 12-10-2018 IPR005636 DTW Vc3S01_0100 4e9167dda319b6e215ded7c7a5380a0e 198 Pfam PF03942 DTW domain 5 183 3.1E-44 T 12-10-2018 IPR005636 DTW Vc3S01_p20119 4ba50818ccd6e2e37b94c2d8965db3f2 853 TIGRFAM TIGR04346 DotA_TraY: conjugal transfer/type IV secretion protein DotA/TraY 23 781 6.4E-37 T 12-10-2018 IPR027628 Conjugal transfer/type IV secretion protein DotA/TraY Vc3S01_A1641 7e9279cb1cd824d5c41b29468b4106d4 760 SUPERFAMILY SSF49464 596 675 1.96E-6 T 12-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily Vc3S01_A1581 994ab3bdd2e2fa79ae7f2a84aa394af1 282 Gene3D G3DSA:1.10.3720.10 1 275 6.0E-50 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_A1581 994ab3bdd2e2fa79ae7f2a84aa394af1 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 277 5.5E-17 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Vc3S01_A1581 994ab3bdd2e2fa79ae7f2a84aa394af1 282 SUPERFAMILY SSF161098 4 278 5.89E-57 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_p30101 549688c82a855e9afa5d218fe8aebf9d 200 SUPERFAMILY SSF53955 17 134 3.07E-10 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily Vc3S01_p30101 549688c82a855e9afa5d218fe8aebf9d 200 Pfam PF01464 Transglycosylase SLT domain 14 115 7.3E-11 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 Vc3S01_p30101 549688c82a855e9afa5d218fe8aebf9d 200 Gene3D G3DSA:1.10.530.10 13 177 1.7E-9 T 12-10-2018 Vc3S01_A1456 7bd399846307a15a54a3953a79ba4c46 249 SUPERFAMILY SSF69572 4 249 3.53E-85 T 12-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 Vc3S01_A1456 7bd399846307a15a54a3953a79ba4c46 249 Pfam PF00899 ThiF family 12 245 5.3E-63 T 12-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 Vc3S01_A1456 7bd399846307a15a54a3953a79ba4c46 249 Gene3D G3DSA:3.40.50.720 4 249 3.1E-86 T 12-10-2018 Vc3S01_A1456 7bd399846307a15a54a3953a79ba4c46 249 TIGRFAM TIGR02355 moeB: molybdopterin synthase sulfurylase MoeB 8 248 1.6E-133 T 12-10-2018 IPR012730 Molybdopterin synthase sulfurylase MoeB GO:0006777 MetaCyc: PWY-6823 Vc3S01_A0307 dcabfc962860bb1968947961cf1311c0 491 Gene3D G3DSA:1.20.1250.20 7 475 6.6E-62 T 12-10-2018 Vc3S01_A0307 dcabfc962860bb1968947961cf1311c0 491 SUPERFAMILY SSF103473 9 475 9.68E-19 T 12-10-2018 IPR036259 MFS transporter superfamily Vc3S01_A0307 dcabfc962860bb1968947961cf1311c0 491 Pfam PF07690 Major Facilitator Superfamily 10 423 5.2E-11 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Vc3S01_2381 856538542877c46c89dcc10cbc6d0c91 542 Gene3D G3DSA:2.40.10.10 26 271 8.8E-66 T 12-10-2018 Vc3S01_2381 856538542877c46c89dcc10cbc6d0c91 542 Gene3D G3DSA:2.60.40.10 272 368 7.3E-6 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_2381 856538542877c46c89dcc10cbc6d0c91 542 SMART SM00020 33 266 1.6E-72 T 12-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 Vc3S01_2381 856538542877c46c89dcc10cbc6d0c91 542 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 75 80 - T 12-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 Vc3S01_2381 856538542877c46c89dcc10cbc6d0c91 542 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 65 80 1.1E-14 T 12-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 Vc3S01_2381 856538542877c46c89dcc10cbc6d0c91 542 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 214 226 1.1E-14 T 12-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 Vc3S01_2381 856538542877c46c89dcc10cbc6d0c91 542 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 122 136 1.1E-14 T 12-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 Vc3S01_2381 856538542877c46c89dcc10cbc6d0c91 542 SUPERFAMILY SSF50494 30 271 3.28E-70 T 12-10-2018 IPR009003 Peptidase S1, PA clan Vc3S01_2381 856538542877c46c89dcc10cbc6d0c91 542 Pfam PF00089 Trypsin 34 261 8.4E-61 T 12-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 Vc3S01_2381 856538542877c46c89dcc10cbc6d0c91 542 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 215 226 - T 12-10-2018 IPR033116 Serine proteases, trypsin family, serine active site Vc3S01_1358 a13f8a963e51b6c3cae55ea09714a145 90 Pfam PF08681 Protein of unknown function (DUF1778) 7 86 3.4E-23 T 12-10-2018 IPR014795 Vibrio phage ICP1, Orf50 Vc3S01_1358 a13f8a963e51b6c3cae55ea09714a145 90 SUPERFAMILY SSF47598 6 82 2.89E-19 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Vc3S01_1358 a13f8a963e51b6c3cae55ea09714a145 90 Gene3D G3DSA:1.20.890.30 50 90 4.5E-21 T 12-10-2018 Vc3S01_1358 a13f8a963e51b6c3cae55ea09714a145 90 Gene3D G3DSA:1.10.1220.10 1 49 1.4E-30 T 12-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 Vc3S01_A1233 6a4183440b155d43b67fef928c696168 389 Gene3D G3DSA:2.60.200.20 6 119 8.4E-21 T 12-10-2018 Vc3S01_A1233 6a4183440b155d43b67fef928c696168 389 TIGRFAM TIGR03354 VI_FHA: type VI secretion system FHA domain protein 151 386 9.1E-66 T 12-10-2018 IPR017735 Type VI secretion system, FHA domain-containing protein Vc3S01_A1233 6a4183440b155d43b67fef928c696168 389 TIGRFAM TIGR03354 VI_FHA: type VI secretion system FHA domain protein 3 118 5.1E-40 T 12-10-2018 IPR017735 Type VI secretion system, FHA domain-containing protein Vc3S01_A1233 6a4183440b155d43b67fef928c696168 389 SUPERFAMILY SSF49879 29 110 3.44E-22 T 12-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 Vc3S01_A1233 6a4183440b155d43b67fef928c696168 389 SMART SM00240 31 82 1.6E-9 T 12-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 Vc3S01_A1233 6a4183440b155d43b67fef928c696168 389 Pfam PF00498 FHA domain 32 101 4.6E-16 T 12-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 Vc3S01_A1183 0d3b6ea6255e0bc75199f345bac30ba0 262 Gene3D G3DSA:3.40.50.1820 7 236 3.3E-32 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_A1183 0d3b6ea6255e0bc75199f345bac30ba0 262 SUPERFAMILY SSF53474 9 247 1.22E-34 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_A1183 0d3b6ea6255e0bc75199f345bac30ba0 262 Pfam PF01764 Lipase (class 3) 60 204 1.5E-27 T 12-10-2018 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: R-HSA-426048 Vc3S01_1959 e6479637e5af3c8b56bafd9e658ed63c 374 Gene3D G3DSA:2.40.370.10 253 374 7.3E-23 T 12-10-2018 IPR023374 AttH-like domain superfamily Vc3S01_1959 e6479637e5af3c8b56bafd9e658ed63c 374 Pfam PF07143 CrtC N-terminal lipocalin domain 79 248 3.5E-44 T 12-10-2018 IPR010791 AttH domain Vc3S01_1959 e6479637e5af3c8b56bafd9e658ed63c 374 SUPERFAMILY SSF159245 56 374 1.96E-92 T 12-10-2018 Vc3S01_1959 e6479637e5af3c8b56bafd9e658ed63c 374 Gene3D G3DSA:2.40.370.10 67 251 1.3E-53 T 12-10-2018 IPR023374 AttH-like domain superfamily Vc3S01_1959 e6479637e5af3c8b56bafd9e658ed63c 374 Pfam PF17186 Lipocalin-like domain 252 374 6.6E-33 T 12-10-2018 Vc3S01_A1719 f4b230c55e0977294c4b6ca99471d03a 282 Gene3D G3DSA:1.25.40.10 97 263 3.5E-16 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_A1719 f4b230c55e0977294c4b6ca99471d03a 282 SUPERFAMILY SSF48452 172 256 9.48E-16 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_A1719 f4b230c55e0977294c4b6ca99471d03a 282 SMART SM00028 186 219 3.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_A1719 f4b230c55e0977294c4b6ca99471d03a 282 SMART SM00028 220 253 0.021 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_A1222 3c16e7705a3f84593509c967985f9075 265 Pfam PF07024 ImpE protein 141 258 1.5E-33 T 12-10-2018 IPR009211 Predicted virulence protein, SciE type Vc3S01_A1222 3c16e7705a3f84593509c967985f9075 265 Gene3D G3DSA:1.25.40.10 1 86 6.1E-15 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_A1222 3c16e7705a3f84593509c967985f9075 265 PIRSF PIRSF029288 1 265 6.1E-78 T 12-10-2018 IPR009211 Predicted virulence protein, SciE type Vc3S01_A1222 3c16e7705a3f84593509c967985f9075 265 SUPERFAMILY SSF144059 3 259 1.31E-76 T 12-10-2018 Vc3S01_A1387 b99a984e80d42c14c074c31376986670 236 SUPERFAMILY SSF53681 1 116 1.34E-36 T 12-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Vc3S01_A1387 b99a984e80d42c14c074c31376986670 236 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 224 6.2E-61 T 12-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Vc3S01_A1387 b99a984e80d42c14c074c31376986670 236 Gene3D G3DSA:3.40.50.1860 4 224 3.2E-86 T 12-10-2018 Vc3S01_A1387 b99a984e80d42c14c074c31376986670 236 Gene3D G3DSA:3.40.50.1860 104 215 3.2E-86 T 12-10-2018 Vc3S01_A1387 b99a984e80d42c14c074c31376986670 236 SUPERFAMILY SSF53681 118 229 1.57E-34 T 12-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Vc3S01_A1387 b99a984e80d42c14c074c31376986670 236 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 231 1.7E-74 T 12-10-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 Vc3S01_A0778 ea03549addb179374fb38a552d728330 232 Gene3D G3DSA:3.40.50.150 35 219 6.4E-28 T 12-10-2018 Vc3S01_A0778 ea03549addb179374fb38a552d728330 232 Pfam PF13489 Methyltransferase domain 77 186 6.1E-15 T 12-10-2018 Vc3S01_A0778 ea03549addb179374fb38a552d728330 232 SUPERFAMILY SSF53335 46 231 4.76E-28 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Vc3S01_1468 87c085b4519752c338dddc5ac07e0251 117 Pfam PF00893 Small Multidrug Resistance protein 12 101 8.1E-25 T 12-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 Vc3S01_1468 87c085b4519752c338dddc5ac07e0251 117 Gene3D G3DSA:1.10.3730.20 9 117 9.1E-34 T 12-10-2018 Vc3S01_1468 87c085b4519752c338dddc5ac07e0251 117 SUPERFAMILY SSF103481 14 112 1.7E-18 T 12-10-2018 Vc3S01_A1997 46be831527453d150e08c305bd0979ae 258 Pfam PF06629 MltA-interacting protein MipA 50 258 2.9E-39 T 12-10-2018 IPR010583 MltA-interacting MipA Vc3S01_1848 95ab80eade8171131194886d5ea227fb 226 Pfam PF08856 Protein of unknown function (DUF1826) 27 224 3.2E-66 T 12-10-2018 IPR014955 Protein of unknown function DUF1826 Vc3S01_3184 6476ffbfa88bbe953b34ece18d4f1e51 88 ProDom PD029038 YIHD CYTOPLASMIC ENZYME Y3814 GLYCOGEN YPO0013A HI0845 DIRECT ORF1 UNCHARACTERIZED 1 87 8.0E-37 T 12-10-2018 IPR009383 Protein of unknown function DUF1040 Vc3S01_3184 6476ffbfa88bbe953b34ece18d4f1e51 88 Gene3D G3DSA:1.10.1580.20 1 88 1.4E-43 T 12-10-2018 IPR038134 YihD-like superfamily Vc3S01_3184 6476ffbfa88bbe953b34ece18d4f1e51 88 Pfam PF06288 Protein of unknown function (DUF1040) 1 86 7.4E-46 T 12-10-2018 IPR009383 Protein of unknown function DUF1040 Vc3S01_2343 2f5458f80b37acb1884d37d4b0a3c98b 296 Pfam PF00550 Phosphopantetheine attachment site 228 289 1.6E-9 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain Vc3S01_2343 2f5458f80b37acb1884d37d4b0a3c98b 296 PIRSF PIRSF001111 1 296 7.2E-127 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 Vc3S01_2343 2f5458f80b37acb1884d37d4b0a3c98b 296 PRINTS PR01398 Isochorismatase signature 2 14 1.8E-47 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 Vc3S01_2343 2f5458f80b37acb1884d37d4b0a3c98b 296 PRINTS PR01398 Isochorismatase signature 110 132 1.8E-47 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 Vc3S01_2343 2f5458f80b37acb1884d37d4b0a3c98b 296 PRINTS PR01398 Isochorismatase signature 61 78 1.8E-47 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 Vc3S01_2343 2f5458f80b37acb1884d37d4b0a3c98b 296 PRINTS PR01398 Isochorismatase signature 166 184 1.8E-47 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 Vc3S01_2343 2f5458f80b37acb1884d37d4b0a3c98b 296 PRINTS PR01398 Isochorismatase signature 184 201 1.8E-47 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 Vc3S01_2343 2f5458f80b37acb1884d37d4b0a3c98b 296 PRINTS PR01398 Isochorismatase signature 78 97 1.8E-47 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 Vc3S01_2343 2f5458f80b37acb1884d37d4b0a3c98b 296 Pfam PF00857 Isochorismatase family 30 203 2.0E-36 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 Vc3S01_2343 2f5458f80b37acb1884d37d4b0a3c98b 296 SUPERFAMILY SSF47336 226 294 2.22E-11 T 12-10-2018 IPR036736 ACP-like superfamily Vc3S01_2343 2f5458f80b37acb1884d37d4b0a3c98b 296 Gene3D G3DSA:1.10.1200.10 220 295 1.8E-26 T 12-10-2018 IPR036736 ACP-like superfamily Vc3S01_2343 2f5458f80b37acb1884d37d4b0a3c98b 296 Gene3D G3DSA:3.40.50.850 1 209 6.2E-76 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Vc3S01_2343 2f5458f80b37acb1884d37d4b0a3c98b 296 SUPERFAMILY SSF52499 2 209 2.35E-59 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Vc3S01_1322 8fb9d91e945064b72f6a0c5e81d62e44 166 Pfam PF04664 Opioid growth factor receptor (OGFr) conserved region 27 164 2.7E-18 T 12-10-2018 IPR006757 Opioid growth factor receptor (OGFr) conserved domain GO:0016020|GO:0038023 Vc3S01_1180 797fab7fa4b171badbd8e325f750c002 440 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 1 303 3.4E-55 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Vc3S01_1180 797fab7fa4b171badbd8e325f750c002 440 SUPERFAMILY SSF51905 1 312 1.22E-41 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_1180 797fab7fa4b171badbd8e325f750c002 440 Gene3D G3DSA:3.50.50.60 111 436 5.8E-150 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_1180 797fab7fa4b171badbd8e325f750c002 440 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 6.6E-22 T 12-10-2018 Vc3S01_1180 797fab7fa4b171badbd8e325f750c002 440 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 3 22 6.6E-22 T 12-10-2018 Vc3S01_1180 797fab7fa4b171badbd8e325f750c002 440 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 149 167 6.6E-22 T 12-10-2018 Vc3S01_1180 797fab7fa4b171badbd8e325f750c002 440 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 6.6E-22 T 12-10-2018 Vc3S01_1180 797fab7fa4b171badbd8e325f750c002 440 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 258 280 6.6E-22 T 12-10-2018 Vc3S01_1180 797fab7fa4b171badbd8e325f750c002 440 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 327 428 8.1E-17 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Vc3S01_1180 797fab7fa4b171badbd8e325f750c002 440 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 4.1E-16 T 12-10-2018 Vc3S01_1180 797fab7fa4b171badbd8e325f750c002 440 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 273 280 4.1E-16 T 12-10-2018 Vc3S01_1180 797fab7fa4b171badbd8e325f750c002 440 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 2 24 4.1E-16 T 12-10-2018 Vc3S01_1180 797fab7fa4b171badbd8e325f750c002 440 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 149 174 4.1E-16 T 12-10-2018 Vc3S01_1180 797fab7fa4b171badbd8e325f750c002 440 SUPERFAMILY SSF55424 319 438 9.28E-32 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Vc3S01_1180 797fab7fa4b171badbd8e325f750c002 440 Gene3D G3DSA:3.50.50.60 2 336 5.8E-150 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_0649 396ff1913cb16d1540d6a35bcfd27325 257 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 12-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 Vc3S01_0649 396ff1913cb16d1540d6a35bcfd27325 257 Pfam PF01026 TatD related DNase 4 253 6.0E-62 T 12-10-2018 IPR001130 TatD family GO:0016788 Vc3S01_0649 396ff1913cb16d1540d6a35bcfd27325 257 SUPERFAMILY SSF51556 1 253 2.95E-75 T 12-10-2018 IPR032466 Metal-dependent hydrolase Vc3S01_0649 396ff1913cb16d1540d6a35bcfd27325 257 PIRSF PIRSF005902 1 257 1.7E-65 T 12-10-2018 IPR001130 TatD family GO:0016788 Vc3S01_0649 396ff1913cb16d1540d6a35bcfd27325 257 Gene3D G3DSA:3.20.20.140 1 255 7.0E-80 T 12-10-2018 Vc3S01_0649 396ff1913cb16d1540d6a35bcfd27325 257 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 12-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 Vc3S01_2657 278e9f1f6233c75c18cb2adb6cab0c58 202 PIRSF PIRSF000239 1 201 1.1E-58 T 12-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Vc3S01_2657 278e9f1f6233c75c18cb2adb6cab0c58 202 Gene3D G3DSA:3.40.30.10 1 197 1.5E-71 T 12-10-2018 Vc3S01_2657 278e9f1f6233c75c18cb2adb6cab0c58 202 SUPERFAMILY SSF52833 1 194 4.88E-66 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Vc3S01_2657 278e9f1f6233c75c18cb2adb6cab0c58 202 Pfam PF00578 AhpC/TSA family 4 139 2.4E-33 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Vc3S01_2657 278e9f1f6233c75c18cb2adb6cab0c58 202 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 193 3.0E-8 T 12-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Vc3S01_A0267 cda49485c929a7a598a2a2eefbe06054 398 SUPERFAMILY SSF52425 3 140 5.36E-19 T 12-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 Vc3S01_A0267 cda49485c929a7a598a2a2eefbe06054 398 Gene3D G3DSA:3.40.50.620 1 79 1.6E-6 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Vc3S01_A0267 cda49485c929a7a598a2a2eefbe06054 398 Pfam PF00875 DNA photolyase 2 117 1.7E-11 T 12-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 Vc3S01_A0267 cda49485c929a7a598a2a2eefbe06054 398 PRINTS PR00147 DNA photolyase signature 269 285 1.7E-11 T 12-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 Vc3S01_A0267 cda49485c929a7a598a2a2eefbe06054 398 PRINTS PR00147 DNA photolyase signature 289 307 1.7E-11 T 12-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 Vc3S01_A0267 cda49485c929a7a598a2a2eefbe06054 398 PRINTS PR00147 DNA photolyase signature 328 342 1.7E-11 T 12-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 Vc3S01_A0267 cda49485c929a7a598a2a2eefbe06054 398 SUPERFAMILY SSF48173 142 370 9.16E-72 T 12-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 Vc3S01_A0267 cda49485c929a7a598a2a2eefbe06054 398 TIGRFAM TIGR02765 crypto_DASH: cryptochrome, DASH family 2 367 2.6E-153 T 12-10-2018 IPR014133 Cryptochrome DASH GO:0003913|GO:0006281 Vc3S01_A0267 cda49485c929a7a598a2a2eefbe06054 398 Gene3D G3DSA:1.25.40.80 84 242 2.7E-46 T 12-10-2018 Vc3S01_A0267 cda49485c929a7a598a2a2eefbe06054 398 Pfam PF03441 FAD binding domain of DNA photolyase 222 366 7.4E-42 T 12-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 Vc3S01_A0267 cda49485c929a7a598a2a2eefbe06054 398 Gene3D G3DSA:1.10.579.10 244 386 2.9E-52 T 12-10-2018 Vc3S01_1811 4a92e5bf11b92a92c6b4e54daf9c46e5 171 Gene3D G3DSA:3.30.2010.10 73 163 7.4E-6 T 12-10-2018 Vc3S01_1811 4a92e5bf11b92a92c6b4e54daf9c46e5 171 Pfam PF01863 Protein of unknown function DUF45 94 150 4.1E-10 T 12-10-2018 IPR002725 Protein of unknown function DUF45 Vc3S01_A1560 37e7bbcc9b20514ea1dacbc85b1e2ce9 132 Pfam PF00293 NUDIX domain 2 108 7.9E-16 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Vc3S01_A1560 37e7bbcc9b20514ea1dacbc85b1e2ce9 132 PRINTS PR00502 NUDIX hydrolase family signature 25 39 1.7E-5 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Vc3S01_A1560 37e7bbcc9b20514ea1dacbc85b1e2ce9 132 PRINTS PR00502 NUDIX hydrolase family signature 39 54 1.7E-5 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Vc3S01_A1560 37e7bbcc9b20514ea1dacbc85b1e2ce9 132 SUPERFAMILY SSF55811 5 113 2.84E-23 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Vc3S01_A1560 37e7bbcc9b20514ea1dacbc85b1e2ce9 132 Gene3D G3DSA:3.90.79.10 2 121 2.1E-23 T 12-10-2018 Vc3S01_0287 4628e68464d2e5d63c3d945d60ed3b97 260 SUPERFAMILY SSF54534 46 253 1.14E-64 T 12-10-2018 Vc3S01_0287 4628e68464d2e5d63c3d945d60ed3b97 260 Gene3D G3DSA:1.10.287.460 31 147 7.8E-32 T 12-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 Vc3S01_0287 4628e68464d2e5d63c3d945d60ed3b97 260 Gene3D G3DSA:3.10.50.40 148 260 1.5E-42 T 12-10-2018 Vc3S01_0287 4628e68464d2e5d63c3d945d60ed3b97 260 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 164 251 1.4E-29 T 12-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain Vc3S01_0287 4628e68464d2e5d63c3d945d60ed3b97 260 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 37 157 2.4E-33 T 12-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 Vc3S01_2466 408fbb6672ec51e3c336c9b96a7de815 363 Hamap MF_00416 Flagellar P-ring protein [flgI]. 2 363 39.865 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Vc3S01_2466 408fbb6672ec51e3c336c9b96a7de815 363 PRINTS PR01010 Flagellar P-ring protein signature 54 69 4.0E-86 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Vc3S01_2466 408fbb6672ec51e3c336c9b96a7de815 363 PRINTS PR01010 Flagellar P-ring protein signature 102 119 4.0E-86 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Vc3S01_2466 408fbb6672ec51e3c336c9b96a7de815 363 PRINTS PR01010 Flagellar P-ring protein signature 22 37 4.0E-86 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Vc3S01_2466 408fbb6672ec51e3c336c9b96a7de815 363 PRINTS PR01010 Flagellar P-ring protein signature 160 178 4.0E-86 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Vc3S01_2466 408fbb6672ec51e3c336c9b96a7de815 363 PRINTS PR01010 Flagellar P-ring protein signature 80 99 4.0E-86 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Vc3S01_2466 408fbb6672ec51e3c336c9b96a7de815 363 PRINTS PR01010 Flagellar P-ring protein signature 119 137 4.0E-86 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Vc3S01_2466 408fbb6672ec51e3c336c9b96a7de815 363 PRINTS PR01010 Flagellar P-ring protein signature 37 52 4.0E-86 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Vc3S01_2466 408fbb6672ec51e3c336c9b96a7de815 363 PRINTS PR01010 Flagellar P-ring protein signature 186 204 4.0E-86 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Vc3S01_2466 408fbb6672ec51e3c336c9b96a7de815 363 PRINTS PR01010 Flagellar P-ring protein signature 250 262 4.0E-86 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Vc3S01_2466 408fbb6672ec51e3c336c9b96a7de815 363 Pfam PF02119 Flagellar P-ring protein 22 362 6.8E-139 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Vc3S01_2225 eabcc8f134f046038ba25a365f2f3ddb 405 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 1 403 48.061 T 12-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Vc3S01_2225 eabcc8f134f046038ba25a365f2f3ddb 405 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 193 203 - T 12-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Vc3S01_2225 eabcc8f134f046038ba25a365f2f3ddb 405 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 10 29 - T 12-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Vc3S01_2225 eabcc8f134f046038ba25a365f2f3ddb 405 SUPERFAMILY SSF51161 292 403 7.54E-15 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily Vc3S01_2225 eabcc8f134f046038ba25a365f2f3ddb 405 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 95 103 - T 12-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Vc3S01_2225 eabcc8f134f046038ba25a365f2f3ddb 405 Pfam PF00483 Nucleotidyl transferase 6 273 6.3E-63 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Vc3S01_2225 eabcc8f134f046038ba25a365f2f3ddb 405 Gene3D G3DSA:3.90.550.10 2 286 1.5E-83 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Vc3S01_2225 eabcc8f134f046038ba25a365f2f3ddb 405 Gene3D G3DSA:2.160.10.10 287 403 1.7E-32 T 12-10-2018 Vc3S01_2225 eabcc8f134f046038ba25a365f2f3ddb 405 SUPERFAMILY SSF53448 4 358 1.31E-69 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Vc3S01_2225 eabcc8f134f046038ba25a365f2f3ddb 405 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 4 377 8.4E-153 T 12-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Vc3S01_2673 dc87cc77d26e4173a8dadc61221f8b01 466 Pfam PF01136 Peptidase family U32 80 355 1.0E-96 T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 Vc3S01_2673 dc87cc77d26e4173a8dadc61221f8b01 466 ProSitePatterns PS01276 Peptidase family U32 signature. 167 185 - T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 Vc3S01_2673 dc87cc77d26e4173a8dadc61221f8b01 466 Pfam PF16325 Peptidase family U32 C-terminal domain 372 452 3.3E-21 T 12-10-2018 IPR032525 Peptidase family U32, C-terminal Vc3S01_2673 dc87cc77d26e4173a8dadc61221f8b01 466 Gene3D G3DSA:2.40.30.10 367 453 2.2E-8 T 12-10-2018 Vc3S01_A0461 ac49237d1ba2771b9fe8b56214e70e78 287 Gene3D G3DSA:1.10.3720.10 61 285 1.5E-35 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_A0461 ac49237d1ba2771b9fe8b56214e70e78 287 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 283 7.5E-27 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Vc3S01_A0461 ac49237d1ba2771b9fe8b56214e70e78 287 SUPERFAMILY SSF161098 22 274 1.87E-42 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_A0461 ac49237d1ba2771b9fe8b56214e70e78 287 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 14 283 1.3E-99 T 12-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 Vc3S01_2496 b4b4f2a4b0e0c10bb29a61ab2eb0e7a2 193 Pfam PF01713 Smr domain 95 175 3.3E-21 T 12-10-2018 IPR002625 Smr domain Vc3S01_2496 b4b4f2a4b0e0c10bb29a61ab2eb0e7a2 193 Gene3D G3DSA:3.30.1370.110 47 181 2.3E-43 T 12-10-2018 Vc3S01_2496 b4b4f2a4b0e0c10bb29a61ab2eb0e7a2 193 SMART SM00463 92 175 6.9E-16 T 12-10-2018 IPR002625 Smr domain Vc3S01_2496 b4b4f2a4b0e0c10bb29a61ab2eb0e7a2 193 SUPERFAMILY SSF160443 93 175 2.22E-14 T 12-10-2018 IPR036063 Smr domain superfamily Vc3S01_2890 02e48c9b000d0b8bc87084645e24e068 112 Pfam PF10973 Protein of unknown function (DUF2799) 28 104 1.8E-14 T 12-10-2018 IPR021242 Protein of unknown function DUF2799 Vc3S01_1098 eeae73460a64b65d699035310d47465a 338 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 5 336 33.417 T 12-10-2018 IPR003770 Endolytic murein transglycosylase Vc3S01_1098 eeae73460a64b65d699035310d47465a 338 Gene3D G3DSA:3.30.160.60 73 110 2.7E-6 T 12-10-2018 Vc3S01_1098 eeae73460a64b65d699035310d47465a 338 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 6 336 2.1E-100 T 12-10-2018 IPR003770 Endolytic murein transglycosylase Vc3S01_1098 eeae73460a64b65d699035310d47465a 338 Pfam PF02618 YceG-like family 43 328 1.8E-82 T 12-10-2018 IPR003770 Endolytic murein transglycosylase Vc3S01_1098 eeae73460a64b65d699035310d47465a 338 Gene3D G3DSA:3.30.160.60 302 338 7.6E-18 T 12-10-2018 Vc3S01_A1379 f3b8ae3ddafcea15c5e41dd9270f761d 292 Pfam PF13407 Periplasmic binding protein domain 28 278 2.5E-61 T 12-10-2018 IPR025997 Periplasmic binding protein Vc3S01_A1379 f3b8ae3ddafcea15c5e41dd9270f761d 292 Gene3D G3DSA:3.40.50.2300 125 259 3.7E-98 T 12-10-2018 Vc3S01_A1379 f3b8ae3ddafcea15c5e41dd9270f761d 292 Gene3D G3DSA:3.40.50.2300 29 278 3.7E-98 T 12-10-2018 Vc3S01_A1379 f3b8ae3ddafcea15c5e41dd9270f761d 292 SUPERFAMILY SSF53822 6 292 7.9E-89 T 12-10-2018 IPR028082 Periplasmic binding protein-like I Vc3S01_1365 c25b2d243d38ef2b5bc8762d39f0021b 117 SUPERFAMILY SSF54593 1 112 1.07E-19 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Vc3S01_1365 c25b2d243d38ef2b5bc8762d39f0021b 117 Gene3D G3DSA:3.10.180.10 1 116 5.5E-13 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Vc3S01_2119 8f2b77ee002d5a3faa0e84465738b012 434 TIGRFAM TIGR00797 matE: MATE efflux family protein 14 408 7.3E-66 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Vc3S01_2119 8f2b77ee002d5a3faa0e84465738b012 434 Pfam PF01554 MatE 14 174 4.3E-17 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Vc3S01_2119 8f2b77ee002d5a3faa0e84465738b012 434 Pfam PF01554 MatE 244 396 1.7E-16 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Vc3S01_2119 8f2b77ee002d5a3faa0e84465738b012 434 PIRSF PIRSF006603 4 434 2.5E-50 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Vc3S01_0055 5b5dd4641916858b775c4696f8ded364 257 Gene3D G3DSA:3.40.50.720 2 257 4.5E-82 T 12-10-2018 Vc3S01_0055 5b5dd4641916858b775c4696f8ded364 257 SUPERFAMILY SSF69572 2 254 7.98E-71 T 12-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 Vc3S01_0055 5b5dd4641916858b775c4696f8ded364 257 Pfam PF00899 ThiF family 10 251 2.8E-57 T 12-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 Vc3S01_1790 d339b62e64bea2491161cd6b93fda373 431 Pfam PF06629 MltA-interacting protein MipA 34 233 1.3E-19 T 12-10-2018 IPR010583 MltA-interacting MipA Vc3S01_A1341 18ba3f2fb9ad43d21eb73f3f3eda22a9 255 PRINTS PR00123 ATP synthase A subunit signature 90 106 2.9E-14 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_A1341 18ba3f2fb9ad43d21eb73f3f3eda22a9 255 PRINTS PR00123 ATP synthase A subunit signature 235 250 2.9E-14 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_A1341 18ba3f2fb9ad43d21eb73f3f3eda22a9 255 PRINTS PR00123 ATP synthase A subunit signature 188 210 2.9E-14 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_A1341 18ba3f2fb9ad43d21eb73f3f3eda22a9 255 ProSitePatterns PS00449 ATP synthase a subunit signature. 191 200 - T 12-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_A1341 18ba3f2fb9ad43d21eb73f3f3eda22a9 255 Hamap MF_01393 ATP synthase subunit a [atpB]. 11 255 15.462 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_A1341 18ba3f2fb9ad43d21eb73f3f3eda22a9 255 SUPERFAMILY SSF81336 85 248 2.35E-44 T 12-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_A1341 18ba3f2fb9ad43d21eb73f3f3eda22a9 255 Pfam PF00119 ATP synthase A chain 32 248 2.1E-56 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_A1341 18ba3f2fb9ad43d21eb73f3f3eda22a9 255 Gene3D G3DSA:1.20.120.220 81 255 4.9E-61 T 12-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_A1341 18ba3f2fb9ad43d21eb73f3f3eda22a9 255 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 18 249 4.5E-43 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Vc3S01_A1478 4d7a55f7f8e93cca9da5066a6eed8e74 304 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 19 295 1.9E-99 T 12-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 Vc3S01_A1478 4d7a55f7f8e93cca9da5066a6eed8e74 304 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 71 93 - T 12-10-2018 IPR030470 UbiA prenyltransferase conserved site Vc3S01_A1478 4d7a55f7f8e93cca9da5066a6eed8e74 304 Pfam PF01040 UbiA prenyltransferase family 33 278 7.3E-64 T 12-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 Vc3S01_A1478 4d7a55f7f8e93cca9da5066a6eed8e74 304 Gene3D G3DSA:1.10.357.140 23 183 1.4E-21 T 12-10-2018 Vc3S01_A1478 4d7a55f7f8e93cca9da5066a6eed8e74 304 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 16 297 19.509 T 12-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 Vc3S01_0355 92adfafd0ba1020e8337b7bc1640c1c3 750 Gene3D G3DSA:3.40.50.200 253 560 1.7E-39 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Vc3S01_0355 92adfafd0ba1020e8337b7bc1640c1c3 750 SUPERFAMILY SSF52743 255 557 1.7E-43 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Vc3S01_0355 92adfafd0ba1020e8337b7bc1640c1c3 750 Pfam PF00082 Subtilase family 288 548 6.2E-28 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 Vc3S01_A1082 b20702778602a7ba4828d61e2678baa9 110 Pfam PF03091 CutA1 divalent ion tolerance protein 8 104 2.1E-31 T 12-10-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 Vc3S01_A1082 b20702778602a7ba4828d61e2678baa9 110 Gene3D G3DSA:3.30.70.120 1 108 4.2E-34 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Vc3S01_A1082 b20702778602a7ba4828d61e2678baa9 110 SUPERFAMILY SSF54913 5 106 1.33E-31 T 12-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Vc3S01_A1045 de4df81a03501bd193f06054bc4d535d 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 357 3.5E-81 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 Vc3S01_A1045 de4df81a03501bd193f06054bc4d535d 382 Gene3D G3DSA:1.20.1090.10 181 380 2.8E-32 T 12-10-2018 Vc3S01_A1045 de4df81a03501bd193f06054bc4d535d 382 SUPERFAMILY SSF56796 2 377 3.53E-97 T 12-10-2018 Vc3S01_A1045 de4df81a03501bd193f06054bc4d535d 382 Gene3D G3DSA:3.40.50.1970 1 180 3.1E-50 T 12-10-2018 Vc3S01_A0030 455e3c0df3f0bfd6ae790bceb6237858 411 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 5 410 23.862 T 12-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 Vc3S01_A0030 455e3c0df3f0bfd6ae790bceb6237858 411 Pfam PF03616 Sodium/glutamate symporter 6 379 9.8E-151 T 12-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 Vc3S01_A0030 455e3c0df3f0bfd6ae790bceb6237858 411 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 10 410 3.0E-134 T 12-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 Vc3S01_0397 27b2a4a724c86c97ebfd9caaf1c19af4 296 Gene3D G3DSA:2.40.10.340 122 266 7.1E-37 T 12-10-2018 Vc3S01_0397 27b2a4a724c86c97ebfd9caaf1c19af4 296 Gene3D G3DSA:2.40.10.350 180 257 7.1E-37 T 12-10-2018 Vc3S01_0397 27b2a4a724c86c97ebfd9caaf1c19af4 296 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 274 1.2E-90 T 12-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 Vc3S01_0397 27b2a4a724c86c97ebfd9caaf1c19af4 296 PIRSF PIRSF038471 2 283 4.4E-83 T 12-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 Vc3S01_0397 27b2a4a724c86c97ebfd9caaf1c19af4 296 Pfam PF04085 rod shape-determining protein MreC 123 269 2.0E-40 T 12-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 Vc3S01_A0401 28e129569a79f91b5d0bcaf72f6b3db4 310 Gene3D G3DSA:3.40.190.10 19 169 1.5E-21 T 12-10-2018 Vc3S01_A0401 28e129569a79f91b5d0bcaf72f6b3db4 310 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 115 291 4.5E-17 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Vc3S01_A0401 28e129569a79f91b5d0bcaf72f6b3db4 310 SMART SM00062 38 294 1.5E-19 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Vc3S01_A0401 28e129569a79f91b5d0bcaf72f6b3db4 310 SUPERFAMILY SSF53850 10 292 1.09E-38 T 12-10-2018 Vc3S01_A0401 28e129569a79f91b5d0bcaf72f6b3db4 310 Gene3D G3DSA:3.40.190.10 196 294 2.0E-10 T 12-10-2018 Vc3S01_A0034 65abe5750b21ee7b24986e928f57e342 365 SUPERFAMILY SSF51905 1 363 2.59E-37 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_A0034 65abe5750b21ee7b24986e928f57e342 365 Pfam PF13450 NAD(P)-binding Rossmann-like domain 7 78 1.4E-16 T 12-10-2018 Vc3S01_A0034 65abe5750b21ee7b24986e928f57e342 365 Gene3D G3DSA:3.50.50.60 1 80 1.6E-13 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_A0034 65abe5750b21ee7b24986e928f57e342 365 Gene3D G3DSA:3.50.50.60 91 365 4.5E-52 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_A0034 65abe5750b21ee7b24986e928f57e342 365 SUPERFAMILY SSF54373 205 304 6.15E-25 T 12-10-2018 Vc3S01_A0034 65abe5750b21ee7b24986e928f57e342 365 Pfam PF01593 Flavin containing amine oxidoreductase 111 356 2.3E-24 T 12-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 Vc3S01_p20168 fca3081421d358ca15825b4eccdf3f52 244 Pfam PF04986 Putative transposase 50 140 2.4E-32 T 12-10-2018 IPR007069 Transposase, IS801/IS1294 GO:0003677|GO:0004803|GO:0006313 Vc3S01_A1424 2c0b9dbe0797e604000a2dc914f0a03f 216 Pfam PF00691 OmpA family 107 200 8.8E-21 T 12-10-2018 IPR006665 OmpA-like domain Vc3S01_A1424 2c0b9dbe0797e604000a2dc914f0a03f 216 SUPERFAMILY SSF103088 101 206 1.7E-29 T 12-10-2018 IPR036737 OmpA-like domain superfamily Vc3S01_A1424 2c0b9dbe0797e604000a2dc914f0a03f 216 Gene3D G3DSA:3.30.1330.60 80 208 3.0E-33 T 12-10-2018 IPR036737 OmpA-like domain superfamily Vc3S01_A1424 2c0b9dbe0797e604000a2dc914f0a03f 216 PRINTS PR01021 OMPA domain signature 136 151 1.2E-12 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Vc3S01_A1424 2c0b9dbe0797e604000a2dc914f0a03f 216 PRINTS PR01021 OMPA domain signature 107 129 1.2E-12 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Vc3S01_A1424 2c0b9dbe0797e604000a2dc914f0a03f 216 PRINTS PR01021 OMPA domain signature 151 167 1.2E-12 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Vc3S01_2037 61a0c3c6ba5aaf0bdf0bb3251ceed1fa 140 Pfam PF05232 Chlorhexidine efflux transporter 69 131 4.3E-22 T 12-10-2018 IPR007896 Chlorhexidine efflux transporter Vc3S01_2037 61a0c3c6ba5aaf0bdf0bb3251ceed1fa 140 Pfam PF05232 Chlorhexidine efflux transporter 1 63 1.1E-23 T 12-10-2018 IPR007896 Chlorhexidine efflux transporter Vc3S01_0936 a6c1c292e9b97de42fb7e24800bb52fc 575 Pfam PF06826 Predicted Permease Membrane Region 15 191 8.5E-32 T 12-10-2018 IPR006512 YidE/YbjL duplication Vc3S01_0936 a6c1c292e9b97de42fb7e24800bb52fc 575 Pfam PF06826 Predicted Permease Membrane Region 402 570 9.9E-30 T 12-10-2018 IPR006512 YidE/YbjL duplication Vc3S01_0936 a6c1c292e9b97de42fb7e24800bb52fc 575 SUPERFAMILY SSF116726 307 386 1.44E-7 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Vc3S01_0252 8771d4fba3dfdc5339ee9fa8f4d9097a 87 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.727 T 12-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 Vc3S01_0252 8771d4fba3dfdc5339ee9fa8f4d9097a 87 Gene3D G3DSA:2.30.30.100 1 72 4.7E-35 T 12-10-2018 Vc3S01_0252 8771d4fba3dfdc5339ee9fa8f4d9097a 87 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 6.8E-30 T 12-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 Vc3S01_0252 8771d4fba3dfdc5339ee9fa8f4d9097a 87 Pfam PF17209 Hfq protein 7 69 1.7E-31 T 12-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 Vc3S01_0252 8771d4fba3dfdc5339ee9fa8f4d9097a 87 SUPERFAMILY SSF50182 7 69 1.19E-24 T 12-10-2018 IPR010920 LSM domain superfamily Vc3S01_1415 5eab16ecd53930cf9971f44b7e831886 200 SMART SM00702 11 187 1.6E-33 T 12-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 Vc3S01_1415 5eab16ecd53930cf9971f44b7e831886 200 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 97 187 2.4E-21 T 12-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 Vc3S01_1415 5eab16ecd53930cf9971f44b7e831886 200 Gene3D G3DSA:2.60.120.620 1 189 9.1E-52 T 12-10-2018 Vc3S01_A1297 1363ffab05d3e92fe7803f2486391f62 533 TIGRFAM TIGR03362 VI_chp_7: type VI secretion-associated protein, VC_A0119 family 6 506 5.6E-79 T 12-10-2018 IPR017739 Type VI secretion system-associated, VCA0119 Vc3S01_A1297 1363ffab05d3e92fe7803f2486391f62 533 Pfam PF16989 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ 255 506 1.6E-67 T 12-10-2018 IPR017739 Type VI secretion system-associated, VCA0119 Vc3S01_A1297 1363ffab05d3e92fe7803f2486391f62 533 Pfam PF06812 ImpA, N-terminal, type VI secretion system 10 120 2.0E-26 T 12-10-2018 IPR010657 ImpA, N-terminal Vc3S01_2009 da083791e8b32661b3999fe17176e96e 308 SUPERFAMILY SSF53474 27 304 3.91E-48 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_2009 da083791e8b32661b3999fe17176e96e 308 Pfam PF00561 alpha/beta hydrolase fold 32 134 3.0E-15 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Vc3S01_2009 da083791e8b32661b3999fe17176e96e 308 Gene3D G3DSA:3.40.50.1820 25 308 2.0E-88 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_A0233 37e12e9cab0a4fd9fdd3c6fae46398bf 142 SUPERFAMILY SSF50630 6 140 4.15E-42 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily Vc3S01_A0233 37e12e9cab0a4fd9fdd3c6fae46398bf 142 Pfam PF05618 Putative ATP-dependant zinc protease 6 138 2.6E-31 T 12-10-2018 Vc3S01_A0233 37e12e9cab0a4fd9fdd3c6fae46398bf 142 Gene3D G3DSA:2.40.70.10 3 133 1.8E-32 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily Vc3S01_A0619 9fd2eb0fc8cd91882f8f4e8582a3bcb8 412 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 11 397 5.0E-63 T 12-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 Vc3S01_A0619 9fd2eb0fc8cd91882f8f4e8582a3bcb8 412 Gene3D G3DSA:1.10.4160.10 3 411 1.2E-46 T 12-10-2018 IPR038271 Purine-cytosine permease superfamily Vc3S01_A0835 745f815adff52694dfcdb1eb00c8b9da 415 Pfam PF07745 Glycosyl hydrolase family 53 56 412 2.5E-121 T 12-10-2018 IPR011683 Glycosyl hydrolase family 53 GO:0015926 Vc3S01_A0835 745f815adff52694dfcdb1eb00c8b9da 415 Gene3D G3DSA:3.20.20.80 34 415 6.9E-146 T 12-10-2018 Vc3S01_A0835 745f815adff52694dfcdb1eb00c8b9da 415 SUPERFAMILY SSF51445 53 413 4.03E-96 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily Vc3S01_A0306 f1c35afe2a2db5c69f65f5e71b703ef0 423 Pfam PF01566 Natural resistance-associated macrophage protein 50 397 3.2E-121 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 Vc3S01_A0306 f1c35afe2a2db5c69f65f5e71b703ef0 423 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 15 422 34.682 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 Vc3S01_A0306 f1c35afe2a2db5c69f65f5e71b703ef0 423 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 31 390 1.2E-95 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 Vc3S01_A0306 f1c35afe2a2db5c69f65f5e71b703ef0 423 PRINTS PR00447 Natural resistance-associated macrophage protein signature 312 331 1.4E-30 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 Vc3S01_A0306 f1c35afe2a2db5c69f65f5e71b703ef0 423 PRINTS PR00447 Natural resistance-associated macrophage protein signature 138 157 1.4E-30 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 Vc3S01_A0306 f1c35afe2a2db5c69f65f5e71b703ef0 423 PRINTS PR00447 Natural resistance-associated macrophage protein signature 163 184 1.4E-30 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 Vc3S01_A0306 f1c35afe2a2db5c69f65f5e71b703ef0 423 PRINTS PR00447 Natural resistance-associated macrophage protein signature 213 236 1.4E-30 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 Vc3S01_A0306 f1c35afe2a2db5c69f65f5e71b703ef0 423 PRINTS PR00447 Natural resistance-associated macrophage protein signature 110 136 1.4E-30 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 Vc3S01_1805 ce88deaf70b1941f827651cd71fb8ef9 388 Gene3D G3DSA:1.20.1250.20 200 381 1.1E-14 T 12-10-2018 Vc3S01_1805 ce88deaf70b1941f827651cd71fb8ef9 388 Pfam PF07690 Major Facilitator Superfamily 12 320 9.7E-17 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Vc3S01_1805 ce88deaf70b1941f827651cd71fb8ef9 388 SUPERFAMILY SSF103473 4 378 1.96E-32 T 12-10-2018 IPR036259 MFS transporter superfamily Vc3S01_1805 ce88deaf70b1941f827651cd71fb8ef9 388 Gene3D G3DSA:1.20.1250.20 2 185 9.7E-14 T 12-10-2018 Vc3S01_A1717 04d726103c0999f913b975339a57eea7 187 Pfam PF13302 Acetyltransferase (GNAT) domain 7 145 1.9E-14 T 12-10-2018 IPR000182 GNAT domain Vc3S01_A1717 04d726103c0999f913b975339a57eea7 187 Gene3D G3DSA:3.40.630.30 2 176 2.2E-33 T 12-10-2018 Vc3S01_A1717 04d726103c0999f913b975339a57eea7 187 SUPERFAMILY SSF55729 5 169 5.13E-31 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_2070 051c4bef337cfb3c4a25b6d73cab61f6 139 Pfam PF12680 SnoaL-like domain 10 108 5.3E-12 T 12-10-2018 IPR037401 SnoaL-like domain Vc3S01_2070 051c4bef337cfb3c4a25b6d73cab61f6 139 Gene3D G3DSA:3.10.450.50 4 124 6.8E-21 T 12-10-2018 Vc3S01_2070 051c4bef337cfb3c4a25b6d73cab61f6 139 SUPERFAMILY SSF54427 5 131 4.73E-23 T 12-10-2018 IPR032710 NTF2-like domain superfamily Vc3S01_0163 a28b17d3d8759fc4c9b879035c9cdc27 131 SUPERFAMILY SSF57997 3 126 2.03E-24 T 12-10-2018 Vc3S01_0835 0f9eb31e6a034b3fb301631894778f1d 117 Pfam PF11169 Protein of unknown function (DUF2956) 12 113 5.7E-43 T 12-10-2018 IPR021339 Protein of unknown function DUF2956 Vc3S01_2194 652d7898f90298a11615ff89b019faaf 528 PIRSF PIRSF006446 337 526 1.8E-33 T 12-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 Vc3S01_2194 652d7898f90298a11615ff89b019faaf 528 PIRSF PIRSF006446 1 332 3.5E-116 T 12-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 Vc3S01_2194 652d7898f90298a11615ff89b019faaf 528 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 501 1.5E-178 T 12-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 Vc3S01_1734 72c737893cb7f774e7545451fc449cae 212 Pfam PF02397 Bacterial sugar transferase 14 207 2.4E-62 T 12-10-2018 IPR003362 Bacterial sugar transferase Vc3S01_1707 a09a34a86caa42f9b4ac495c2b7db59d 138 Gene3D G3DSA:3.90.79.10 4 133 2.6E-14 T 12-10-2018 Vc3S01_1707 a09a34a86caa42f9b4ac495c2b7db59d 138 Pfam PF00293 NUDIX domain 9 94 2.4E-10 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Vc3S01_1707 a09a34a86caa42f9b4ac495c2b7db59d 138 SUPERFAMILY SSF55811 5 131 4.06E-15 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Vc3S01_2164 a61e914df451c0d3c812521f8d7da0ff 82 TIGRFAM TIGR02105 III_needle: type III secretion apparatus needle protein 11 82 5.7E-22 T 12-10-2018 IPR011841 Type III secretion system, needle protein GO:0008565|GO:0009405|GO:0015031 Vc3S01_2164 a61e914df451c0d3c812521f8d7da0ff 82 SUPERFAMILY SSF140129 2 78 6.54E-24 T 12-10-2018 IPR037203 Type III secretion, needle-protein-like superfamily GO:0009405|GO:0015031 Vc3S01_2164 a61e914df451c0d3c812521f8d7da0ff 82 Gene3D G3DSA:1.20.58.90 1 82 2.7E-12 T 12-10-2018 Vc3S01_2164 a61e914df451c0d3c812521f8d7da0ff 82 Pfam PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF 12 82 4.1E-25 T 12-10-2018 IPR021123 Type III secretion, needle-protein-like GO:0009405|GO:0015031 Vc3S01_p30036 04a0ab7d0b34eb262847cf64689c8b52 728 Pfam PF01526 Tn3 transposase DDE domain 311 700 3.3E-137 T 12-10-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 Vc3S01_2357 461809adb0f1e3d5f5bdbe1cea5980da 722 SUPERFAMILY SSF52540 318 665 4.28E-27 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2357 461809adb0f1e3d5f5bdbe1cea5980da 722 SMART SM00487 256 450 5.6E-6 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Vc3S01_2357 461809adb0f1e3d5f5bdbe1cea5980da 722 Pfam PF00271 Helicase conserved C-terminal domain 530 649 9.3E-15 T 12-10-2018 IPR001650 Helicase, C-terminal Vc3S01_2357 461809adb0f1e3d5f5bdbe1cea5980da 722 Pfam PF04851 Type III restriction enzyme, res subunit 258 430 1.2E-16 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Vc3S01_2357 461809adb0f1e3d5f5bdbe1cea5980da 722 Pfam PF13091 PLD-like domain 28 189 9.7E-8 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Vc3S01_2357 461809adb0f1e3d5f5bdbe1cea5980da 722 Gene3D G3DSA:3.40.50.300 250 459 3.4E-22 T 12-10-2018 Vc3S01_2357 461809adb0f1e3d5f5bdbe1cea5980da 722 Gene3D G3DSA:3.40.50.300 460 675 5.9E-36 T 12-10-2018 Vc3S01_2357 461809adb0f1e3d5f5bdbe1cea5980da 722 SMART SM00490 570 651 5.8E-12 T 12-10-2018 IPR001650 Helicase, C-terminal Vc3S01_0445 a242a9189ac94e824bff94a97b7168b8 159 Pfam PF06271 RDD family 9 149 8.4E-21 T 12-10-2018 IPR010432 RDD Vc3S01_2715 1d99423dce7c1738c267c1e830aed00a 283 SUPERFAMILY SSF55831 2 283 1.09E-90 T 12-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Vc3S01_2715 1d99423dce7c1738c267c1e830aed00a 283 ProSitePatterns PS00091 Thymidylate synthase active site. 140 168 - T 12-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Vc3S01_2715 1d99423dce7c1738c267c1e830aed00a 283 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 283 1.2E-41 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Vc3S01_2715 1d99423dce7c1738c267c1e830aed00a 283 PRINTS PR00108 Thymidylate synthase family signature 44 65 9.7E-14 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Vc3S01_2715 1d99423dce7c1738c267c1e830aed00a 283 PRINTS PR00108 Thymidylate synthase family signature 173 199 9.7E-14 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Vc3S01_2715 1d99423dce7c1738c267c1e830aed00a 283 PRINTS PR00108 Thymidylate synthase family signature 211 228 9.7E-14 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Vc3S01_2715 1d99423dce7c1738c267c1e830aed00a 283 PRINTS PR00108 Thymidylate synthase family signature 129 148 9.7E-14 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Vc3S01_2715 1d99423dce7c1738c267c1e830aed00a 283 Pfam PF00303 Thymidylate synthase 2 283 6.8E-74 T 12-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Vc3S01_2715 1d99423dce7c1738c267c1e830aed00a 283 Gene3D G3DSA:3.30.572.10 1 283 3.1E-80 T 12-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Vc3S01_2715 1d99423dce7c1738c267c1e830aed00a 283 Hamap MF_00008 Thymidylate synthase [thyA]. 1 283 33.201 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Vc3S01_2720 94a2df5ecc546cd00b2d938d047ac18b 226 SUPERFAMILY SSF52980 2 220 2.31E-81 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Vc3S01_2720 94a2df5ecc546cd00b2d938d047ac18b 226 Hamap MF_00759 DNA mismatch repair protein MutH [mutH]. 1 226 148.318 T 12-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 Vc3S01_2720 94a2df5ecc546cd00b2d938d047ac18b 226 Pfam PF02976 DNA mismatch repair enzyme MutH 53 151 1.4E-33 T 12-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 Vc3S01_2720 94a2df5ecc546cd00b2d938d047ac18b 226 Gene3D G3DSA:3.40.600.10 1 222 1.2E-56 T 12-10-2018 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily GO:0003677|GO:0004519 Vc3S01_2720 94a2df5ecc546cd00b2d938d047ac18b 226 TIGRFAM TIGR02248 mutH_TIGR: DNA mismatch repair endonuclease MutH 5 219 6.3E-101 T 12-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 Vc3S01_2720 94a2df5ecc546cd00b2d938d047ac18b 226 SMART SM00927 53 151 1.7E-64 T 12-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 Vc3S01_2030 a9b4e01426c34b1f75a8c4bea4f04a32 820 Pfam PF01568 Molydopterin dinucleotide binding domain 676 796 7.1E-24 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Vc3S01_2030 a9b4e01426c34b1f75a8c4bea4f04a32 820 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 716 743 - T 12-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 Vc3S01_2030 a9b4e01426c34b1f75a8c4bea4f04a32 820 Gene3D G3DSA:3.40.228.10 179 641 4.3E-241 T 12-10-2018 Vc3S01_2030 a9b4e01426c34b1f75a8c4bea4f04a32 820 Pfam PF00384 Molybdopterin oxidoreductase 87 560 3.4E-76 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Vc3S01_2030 a9b4e01426c34b1f75a8c4bea4f04a32 820 Gene3D G3DSA:3.90.55.10 82 615 4.3E-241 T 12-10-2018 Vc3S01_2030 a9b4e01426c34b1f75a8c4bea4f04a32 820 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 503 520 - T 12-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 Vc3S01_2030 a9b4e01426c34b1f75a8c4bea4f04a32 820 Gene3D G3DSA:3.40.50.740 87 569 4.3E-241 T 12-10-2018 Vc3S01_2030 a9b4e01426c34b1f75a8c4bea4f04a32 820 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 28 2.1E-4 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Vc3S01_2030 a9b4e01426c34b1f75a8c4bea4f04a32 820 Gene3D G3DSA:2.40.40.20 649 813 1.3E-47 T 12-10-2018 Vc3S01_2030 a9b4e01426c34b1f75a8c4bea4f04a32 820 TIGRFAM TIGR02164 torA: trimethylamine-N-oxide reductase TorA 1 819 0.0 T 12-10-2018 IPR011887 Trimethylamine-N-oxide reductase TorA GO:0030151|GO:0042597|GO:0050626 Vc3S01_2030 a9b4e01426c34b1f75a8c4bea4f04a32 820 SUPERFAMILY SSF50692 669 817 2.71E-42 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Vc3S01_2030 a9b4e01426c34b1f75a8c4bea4f04a32 820 SUPERFAMILY SSF53706 42 660 6.15E-165 T 12-10-2018 Vc3S01_2600 1286d76e9196704d896d67608f343913 147 SUPERFAMILY SSF55961 1 143 2.01E-33 T 12-10-2018 Vc3S01_2600 1286d76e9196704d896d67608f343913 147 Gene3D G3DSA:3.30.530.20 1 143 4.5E-37 T 12-10-2018 IPR023393 START-like domain superfamily Vc3S01_2600 1286d76e9196704d896d67608f343913 147 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 135 1.1E-30 T 12-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 Vc3S01_0061 9f9d45d021b13e1c9f1ed2beb94149ac 381 Pfam PF07690 Major Facilitator Superfamily 3 336 9.0E-46 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Vc3S01_0061 9f9d45d021b13e1c9f1ed2beb94149ac 381 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 1 364 1.1E-72 T 12-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 Vc3S01_0061 9f9d45d021b13e1c9f1ed2beb94149ac 381 SUPERFAMILY SSF103473 3 367 3.4E-56 T 12-10-2018 IPR036259 MFS transporter superfamily Vc3S01_0061 9f9d45d021b13e1c9f1ed2beb94149ac 381 ProSitePatterns PS00216 Sugar transport proteins signature 1. 49 65 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Vc3S01_0061 9f9d45d021b13e1c9f1ed2beb94149ac 381 Gene3D G3DSA:1.20.1720.10 1 369 1.4E-87 T 12-10-2018 Vc3S01_1019 a32d35e6127932bafd030280908e0c15 316 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 36 253 4.3E-34 T 12-10-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 Vc3S01_A2049 2ac55599868b031da91de1745684cd36 300 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 8 297 3.4E-134 T 12-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 Vc3S01_A2049 2ac55599868b031da91de1745684cd36 300 Pfam PF01380 SIS domain 129 211 4.5E-8 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Vc3S01_A2049 2ac55599868b031da91de1745684cd36 300 Gene3D G3DSA:3.40.50.10490 1 220 9.7E-82 T 12-10-2018 Vc3S01_A2049 2ac55599868b031da91de1745684cd36 300 SUPERFAMILY SSF53697 8 250 1.13E-69 T 12-10-2018 Vc3S01_A2049 2ac55599868b031da91de1745684cd36 300 Gene3D G3DSA:1.10.8.1080 221 299 5.1E-29 T 12-10-2018 Vc3S01_A2049 2ac55599868b031da91de1745684cd36 300 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 187 204 - T 12-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 Vc3S01_A2049 2ac55599868b031da91de1745684cd36 300 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 4 297 43.561 T 12-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 Vc3S01_1689 35d653c4d6f621cd269bdcd62e8a01c3 773 SUPERFAMILY SSF52540 448 619 1.1E-8 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_1689 35d653c4d6f621cd269bdcd62e8a01c3 773 Gene3D G3DSA:3.40.50.300 447 590 2.6E-9 T 12-10-2018 Vc3S01_1380 5fdf94931e006c721f59ffadbc59bf9f 141 SUPERFAMILY SSF53927 2 137 3.01E-38 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Vc3S01_1380 5fdf94931e006c721f59ffadbc59bf9f 141 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 49 87 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 Vc3S01_1380 5fdf94931e006c721f59ffadbc59bf9f 141 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 98 1.1E-15 T 12-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain Vc3S01_1380 5fdf94931e006c721f59ffadbc59bf9f 141 Gene3D G3DSA:3.40.140.10 1 132 3.9E-38 T 12-10-2018 Vc3S01_0880 2a9c5f8c50d5f6039c6c0bbd07e6eac9 205 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 2 203 1.6E-77 T 12-10-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004 Vc3S01_0880 2a9c5f8c50d5f6039c6c0bbd07e6eac9 205 SMART SM00382 26 205 1.6E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_0880 2a9c5f8c50d5f6039c6c0bbd07e6eac9 205 Gene3D G3DSA:3.40.50.300 1 196 5.0E-42 T 12-10-2018 Vc3S01_0880 2a9c5f8c50d5f6039c6c0bbd07e6eac9 205 SUPERFAMILY SSF52540 2 193 1.04E-39 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0880 2a9c5f8c50d5f6039c6c0bbd07e6eac9 205 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_0880 2a9c5f8c50d5f6039c6c0bbd07e6eac9 205 Pfam PF00005 ABC transporter 18 158 4.1E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_0277 9b51a4388b26cd07ec375cc77ab0430f 159 Pfam PF09523 Protein of unknown function (DUF2390) 15 115 1.1E-28 T 12-10-2018 IPR012659 Conserved hypothetical protein CHP02444 Vc3S01_0277 9b51a4388b26cd07ec375cc77ab0430f 159 TIGRFAM TIGR02444 TIGR02444: TIGR02444 family protein 13 119 1.2E-35 T 12-10-2018 IPR012659 Conserved hypothetical protein CHP02444 Vc3S01_p10054 68d42d24a460768ebce2d525d7b1d68c 171 SUPERFAMILY SSF53955 11 149 4.69E-15 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily Vc3S01_p10054 68d42d24a460768ebce2d525d7b1d68c 171 Pfam PF01464 Transglycosylase SLT domain 9 151 1.7E-16 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 Vc3S01_1930 70c37ae8d30aec1df4c751e36df85aa7 429 PIRSF PIRSF002746 1 429 1.2E-136 T 12-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 Vc3S01_1930 70c37ae8d30aec1df4c751e36df85aa7 429 Pfam PF02447 GntP family permease 1 427 2.2E-151 T 12-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 Vc3S01_1930 70c37ae8d30aec1df4c751e36df85aa7 429 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 2 429 8.7E-158 T 12-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 Vc3S01_1709 bd2ac6c04d56d0c41c4c01e66d5df6c9 162 Gene3D G3DSA:3.90.1720.10 40 162 2.7E-42 T 12-10-2018 Vc3S01_1709 bd2ac6c04d56d0c41c4c01e66d5df6c9 162 SUPERFAMILY SSF54001 44 160 2.35E-40 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Vc3S01_1709 bd2ac6c04d56d0c41c4c01e66d5df6c9 162 Pfam PF00877 NlpC/P60 family 55 159 4.8E-32 T 12-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain Vc3S01_2383 9ecfc4f4c008766515a312c9b4c56cd7 198 SUPERFAMILY SSF54593 2 197 2.19E-67 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Vc3S01_2383 9ecfc4f4c008766515a312c9b4c56cd7 198 Gene3D G3DSA:3.10.180.10 6 198 4.9E-62 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Vc3S01_2383 9ecfc4f4c008766515a312c9b4c56cd7 198 Pfam PF06185 YecM protein 14 196 3.6E-68 T 12-10-2018 IPR010393 Protein of unknown function DUF991 Vc3S01_1243 e6f8fe363114b534317e8232f4ae470b 515 Pfam PF01471 Putative peptidoglycan binding domain 223 262 2.2E-9 T 12-10-2018 IPR002477 Peptidoglycan binding-like Vc3S01_1243 e6f8fe363114b534317e8232f4ae470b 515 SUPERFAMILY SSF141523 289 450 1.57E-19 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Vc3S01_1243 e6f8fe363114b534317e8232f4ae470b 515 Pfam PF03734 L,D-transpeptidase catalytic domain 290 456 2.4E-30 T 12-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 Vc3S01_1243 e6f8fe363114b534317e8232f4ae470b 515 SUPERFAMILY SSF53955 238 309 4.67E-11 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily Vc3S01_A1400 3dec95cb93490ccd84796a74235e93d5 155 SUPERFAMILY SSF82784 1 153 9.16E-49 T 12-10-2018 IPR036102 OsmC/Ohr superfamily Vc3S01_A1400 3dec95cb93490ccd84796a74235e93d5 155 Gene3D G3DSA:3.30.300.20 1 154 2.0E-49 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta Vc3S01_A1400 3dec95cb93490ccd84796a74235e93d5 155 Pfam PF02566 OsmC-like protein 55 152 7.8E-16 T 12-10-2018 IPR003718 OsmC/Ohr family Vc3S01_p10082 98dd613923ed3ca9d5f6c71104338347 804 Pfam PF01935 Domain of unknown function DUF87 452 490 2.9E-5 T 12-10-2018 IPR002789 Helicase HerA, central domain Vc3S01_p10082 98dd613923ed3ca9d5f6c71104338347 804 SUPERFAMILY SSF52540 410 754 1.42E-36 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_p10082 98dd613923ed3ca9d5f6c71104338347 804 Gene3D G3DSA:3.40.50.300 433 559 1.7E-7 T 12-10-2018 Vc3S01_p10082 98dd613923ed3ca9d5f6c71104338347 804 Gene3D G3DSA:3.40.50.300 587 770 2.0E-20 T 12-10-2018 Vc3S01_p10082 98dd613923ed3ca9d5f6c71104338347 804 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 182 397 1.1E-18 T 12-10-2018 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 Vc3S01_2028 01237bd8106ca9271170321c34995d3a 404 Pfam PF11449 Putative, 10TM heavy-metal exporter 41 402 2.5E-163 T 12-10-2018 IPR021552 Putative, 10TM heavy-metal exporter Vc3S01_A0223 2ab60f662433dee350e6448a312dd7d8 307 SUPERFAMILY SSF53807 26 296 1.03E-64 T 12-10-2018 Vc3S01_A0223 2ab60f662433dee350e6448a312dd7d8 307 Gene3D G3DSA:3.40.50.1980 190 296 6.3E-20 T 12-10-2018 Vc3S01_A0223 2ab60f662433dee350e6448a312dd7d8 307 Pfam PF01297 Zinc-uptake complex component A periplasmic 33 293 1.7E-46 T 12-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 Vc3S01_A0223 2ab60f662433dee350e6448a312dd7d8 307 PRINTS PR00690 Adhesin family signature 58 71 1.3E-7 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Vc3S01_A0223 2ab60f662433dee350e6448a312dd7d8 307 PRINTS PR00690 Adhesin family signature 238 256 1.3E-7 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Vc3S01_A0223 2ab60f662433dee350e6448a312dd7d8 307 PRINTS PR00690 Adhesin family signature 185 206 1.3E-7 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Vc3S01_A0223 2ab60f662433dee350e6448a312dd7d8 307 PRINTS PR00690 Adhesin family signature 71 88 1.3E-7 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Vc3S01_A0223 2ab60f662433dee350e6448a312dd7d8 307 PRINTS PR00691 Adhesin B signature 52 70 3.5E-10 T 12-10-2018 IPR006129 Adhesin B GO:0007155 Vc3S01_A0223 2ab60f662433dee350e6448a312dd7d8 307 PRINTS PR00691 Adhesin B signature 127 146 3.5E-10 T 12-10-2018 IPR006129 Adhesin B GO:0007155 Vc3S01_A0223 2ab60f662433dee350e6448a312dd7d8 307 PRINTS PR00691 Adhesin B signature 27 48 3.5E-10 T 12-10-2018 IPR006129 Adhesin B GO:0007155 Vc3S01_A0223 2ab60f662433dee350e6448a312dd7d8 307 PRINTS PR00691 Adhesin B signature 234 251 3.5E-10 T 12-10-2018 IPR006129 Adhesin B GO:0007155 Vc3S01_A0223 2ab60f662433dee350e6448a312dd7d8 307 PRINTS PR00691 Adhesin B signature 71 90 3.5E-10 T 12-10-2018 IPR006129 Adhesin B GO:0007155 Vc3S01_A0223 2ab60f662433dee350e6448a312dd7d8 307 Gene3D G3DSA:3.40.50.1980 30 179 2.4E-33 T 12-10-2018 Vc3S01_A0254 86c26a1e2166d16f6c2e5e5bbbddaf85 203 Pfam PF11140 Protein of unknown function (DUF2913) 13 193 7.4E-47 T 12-10-2018 IPR021316 Protein of unknown function DUF2913 Vc3S01_2604 07a4e6b3bd352f4779f8b6c1e798a781 191 Pfam PF09335 SNARE associated Golgi protein 29 149 3.2E-21 T 12-10-2018 IPR032816 SNARE associated Golgi protein Vc3S01_A1866 8e9a2ae8b98a653182abb6a406cd7e88 293 Pfam PF04018 Domain of unknown function (DUF368) 1 245 4.2E-97 T 12-10-2018 IPR007163 Protein of unknown function DUF368 Vc3S01_A0869 d92fc637e5faf5302ff20e1cc2c2bc1c 205 Pfam PF13505 Outer membrane protein beta-barrel domain 5 205 3.8E-22 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel Vc3S01_A0869 d92fc637e5faf5302ff20e1cc2c2bc1c 205 SUPERFAMILY SSF56925 18 205 1.78E-27 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel Vc3S01_A0869 d92fc637e5faf5302ff20e1cc2c2bc1c 205 Gene3D G3DSA:2.40.160.20 18 205 2.1E-26 T 12-10-2018 Vc3S01_1187 75b5539fac1ebbaa9e6d8b80818d4108 66 Pfam PF14056 Domain of unknown function (DUF4250) 10 61 2.6E-18 T 12-10-2018 IPR025346 Protein of unknown function DUF4250 Vc3S01_A2051 1236b44c6d94d0cd219914d562a38e5a 352 Pfam PF13609 Gram-negative porin 15 319 2.0E-17 T 12-10-2018 Vc3S01_A2051 1236b44c6d94d0cd219914d562a38e5a 352 SUPERFAMILY SSF56935 26 350 7.33E-40 T 12-10-2018 Vc3S01_A2051 1236b44c6d94d0cd219914d562a38e5a 352 Gene3D G3DSA:2.40.160.10 22 351 4.5E-33 T 12-10-2018 IPR023614 Porin domain superfamily Vc3S01_1571 658ec105912af473f37dc64ffaec6112 312 SUPERFAMILY SSF49879 5 99 4.56E-15 T 12-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 Vc3S01_1571 658ec105912af473f37dc64ffaec6112 312 Gene3D G3DSA:2.60.200.20 4 115 6.5E-12 T 12-10-2018 Vc3S01_1571 658ec105912af473f37dc64ffaec6112 312 Pfam PF00498 FHA domain 30 94 2.1E-9 T 12-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 Vc3S01_0448 6d8a800e5acb254911b065b157223b4d 427 Gene3D G3DSA:3.20.20.370 27 332 3.7E-103 T 12-10-2018 Vc3S01_0448 6d8a800e5acb254911b065b157223b4d 427 Pfam PF01522 Polysaccharide deacetylase 23 127 1.3E-11 T 12-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 Vc3S01_0448 6d8a800e5acb254911b065b157223b4d 427 SMART SM00495 332 378 7.2E-5 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 Vc3S01_0448 6d8a800e5acb254911b065b157223b4d 427 SMART SM00495 381 427 0.84 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 Vc3S01_0448 6d8a800e5acb254911b065b157223b4d 427 SUPERFAMILY SSF51055 383 426 1.57E-14 T 12-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 Vc3S01_0448 6d8a800e5acb254911b065b157223b4d 427 Gene3D G3DSA:2.10.10.90 333 427 3.5E-33 T 12-10-2018 Vc3S01_0448 6d8a800e5acb254911b065b157223b4d 427 SUPERFAMILY SSF51055 334 377 1.83E-13 T 12-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 Vc3S01_0448 6d8a800e5acb254911b065b157223b4d 427 SUPERFAMILY SSF88713 14 335 5.87E-25 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Vc3S01_2242 29923679a82d8d4617c0995930cb2707 181 Gene3D G3DSA:1.20.1270.340 1 98 2.8E-16 T 12-10-2018 IPR038338 PriB/PriC superfamily Vc3S01_2242 29923679a82d8d4617c0995930cb2707 181 Pfam PF07445 Primosomal replication protein priC 5 178 1.6E-49 T 12-10-2018 IPR010890 Primosomal replication PriB/PriC Vc3S01_p40075 7f5f561e7659c18201b93be8d6c2c772 83 SMART SM00966 6 51 2.6E-7 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Vc3S01_p40075 7f5f561e7659c18201b93be8d6c2c772 83 Gene3D G3DSA:2.10.260.10 1 81 3.1E-13 T 12-10-2018 Vc3S01_p40075 7f5f561e7659c18201b93be8d6c2c772 83 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 6 50 4.1E-8 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Vc3S01_p40075 7f5f561e7659c18201b93be8d6c2c772 83 SUPERFAMILY SSF89447 1 65 1.71E-13 T 12-10-2018 IPR037914 SpoVT-AbrB domain superfamily Vc3S01_2959 f9e59ead407b509d5248e5c909780341 292 Gene3D G3DSA:3.90.550.10 1 276 7.1E-81 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Vc3S01_2959 f9e59ead407b509d5248e5c909780341 292 Pfam PF00483 Nucleotidyl transferase 9 265 2.7E-31 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Vc3S01_2959 f9e59ead407b509d5248e5c909780341 292 SUPERFAMILY SSF53448 2 269 2.29E-64 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Vc3S01_2959 f9e59ead407b509d5248e5c909780341 292 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 2 263 2.3E-123 T 12-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 Vc3S01_A1694 fce7ae945e82af1db31f1aeb4fdc982d 226 SUPERFAMILY SSF48452 18 104 7.05E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_1983 48a566e95e130b484ebefc0137aadc06 54 Pfam PF06945 Protein of unknown function (DUF1289) 1 28 7.6E-5 T 12-10-2018 IPR010710 Protein of unknown function DUF1289 Vc3S01_A1971 ee9e5e8e83ea6e862dea54c70b87b81b 88 Pfam PF11212 Protein of unknown function (DUF2999) 1 82 4.7E-46 T 12-10-2018 IPR021376 Protein of unknown function DUF2999 Vc3S01_0713 2a6b5064a25fcc819913ac7a0f5645f2 351 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 28 344 2.1E-64 T 12-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 Vc3S01_0713 2a6b5064a25fcc819913ac7a0f5645f2 351 Gene3D G3DSA:3.20.20.190 21 350 2.2E-124 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 Vc3S01_0713 2a6b5064a25fcc819913ac7a0f5645f2 351 SUPERFAMILY SSF51695 23 349 2.35E-90 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 Vc3S01_A0522 cc14d65ffffeb51cdf3a386a9cf3352d 129 Pfam PF04892 VanZ like family 38 123 1.8E-8 T 12-10-2018 IPR006976 VanZ-like Vc3S01_A0098 f4078ce8a24dfcec7ae00fa5c0a45472 449 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 17 31 - T 12-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site Vc3S01_A0098 f4078ce8a24dfcec7ae00fa5c0a45472 449 PRINTS PR00131 Glycosyl hydrolase family 1 signature 391 408 2.6E-23 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Vc3S01_A0098 f4078ce8a24dfcec7ae00fa5c0a45472 449 PRINTS PR00131 Glycosyl hydrolase family 1 signature 370 381 2.6E-23 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Vc3S01_A0098 f4078ce8a24dfcec7ae00fa5c0a45472 449 PRINTS PR00131 Glycosyl hydrolase family 1 signature 415 427 2.6E-23 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Vc3S01_A0098 f4078ce8a24dfcec7ae00fa5c0a45472 449 PRINTS PR00131 Glycosyl hydrolase family 1 signature 350 358 2.6E-23 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Vc3S01_A0098 f4078ce8a24dfcec7ae00fa5c0a45472 449 PRINTS PR00131 Glycosyl hydrolase family 1 signature 289 303 2.6E-23 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Vc3S01_A0098 f4078ce8a24dfcec7ae00fa5c0a45472 449 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 350 358 - T 12-10-2018 IPR018120 Glycoside hydrolase family 1, active site Vc3S01_A0098 f4078ce8a24dfcec7ae00fa5c0a45472 449 TIGRFAM TIGR03356 BGL: beta-galactosidase 16 437 1.4E-185 T 12-10-2018 IPR017736 Glycoside hydrolase, family 1, beta-glucosidase GO:0008422|GO:0030245 KEGG: 00460+3.2.1.21|KEGG: 00500+3.2.1.21|KEGG: 00940+3.2.1.21|MetaCyc: PWY-3121|MetaCyc: PWY-5176|MetaCyc: PWY-6002|MetaCyc: PWY-6788|MetaCyc: PWY-7091|MetaCyc: PWY-7092|MetaCyc: PWY-7913 Vc3S01_A0098 f4078ce8a24dfcec7ae00fa5c0a45472 449 Gene3D G3DSA:3.20.20.80 9 447 7.9E-163 T 12-10-2018 Vc3S01_A0098 f4078ce8a24dfcec7ae00fa5c0a45472 449 SUPERFAMILY SSF51445 16 441 1.06E-155 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily Vc3S01_A0098 f4078ce8a24dfcec7ae00fa5c0a45472 449 Pfam PF00232 Glycosyl hydrolase family 1 15 441 2.4E-149 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Vc3S01_2495 12847f5c1732c5a4798df888d98d5085 46 Pfam PF11346 Protein of unknown function (DUF3149) 4 43 2.3E-16 T 12-10-2018 IPR021494 Protein of unknown function DUF3149 Vc3S01_1622 222dd7fd02eb06344c2906221a664017 109 Gene3D G3DSA:3.10.129.10 1 102 4.6E-11 T 12-10-2018 Vc3S01_1622 222dd7fd02eb06344c2906221a664017 109 SUPERFAMILY SSF54637 1 103 6.07E-8 T 12-10-2018 IPR029069 HotDog domain superfamily Vc3S01_A0245 1f644a98f155b686b003dce1f16eac5e 436 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 11 410 1.2E-103 T 12-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 Vc3S01_A0245 1f644a98f155b686b003dce1f16eac5e 436 Pfam PF05525 Branched-chain amino acid transport protein 5 423 5.1E-114 T 12-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 Vc3S01_A1093 f25405423746a5919da8dee0180c44f6 311 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 10 292 3.0E-82 T 12-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B Vc3S01_A1093 f25405423746a5919da8dee0180c44f6 311 Gene3D G3DSA:2.40.100.10 182 309 1.6E-42 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily Vc3S01_A1093 f25405423746a5919da8dee0180c44f6 311 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 28 291 3.3E-86 T 12-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B Vc3S01_A1093 f25405423746a5919da8dee0180c44f6 311 SMART SM00797 27 308 9.6E-136 T 12-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B Vc3S01_A1093 f25405423746a5919da8dee0180c44f6 311 SUPERFAMILY SSF50891 184 295 3.64E-11 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily Vc3S01_A0014 37b9b276a4d62fce1975bae99b366ef3 336 Pfam PF11168 Protein of unknown function (DUF2955) 17 155 8.4E-26 T 12-10-2018 IPR022604 Protein of unknown function DUF2955 Vc3S01_A1296 a63461a04cc8e107246f4721cb3ab61b 168 PIRSF PIRSF028301 1 168 5.7E-63 T 12-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 Vc3S01_A1296 a63461a04cc8e107246f4721cb3ab61b 168 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 4 157 3.1E-56 T 12-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 Vc3S01_A1296 a63461a04cc8e107246f4721cb3ab61b 168 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 6 157 2.3E-58 T 12-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 Vc3S01_0037 a221d2db9faed8fd65a18ebe1ce27f1f 184 Pfam PF01169 Uncharacterized protein family UPF0016 103 178 4.2E-20 T 12-10-2018 IPR001727 Gdt1 family Vc3S01_0037 a221d2db9faed8fd65a18ebe1ce27f1f 184 Pfam PF01169 Uncharacterized protein family UPF0016 7 80 1.3E-20 T 12-10-2018 IPR001727 Gdt1 family Vc3S01_2601 62cd8e9112c63293c8a79e747688fdad 161 TIGRFAM TIGR00086 smpB: SsrA-binding protein 15 157 9.3E-52 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 Vc3S01_2601 62cd8e9112c63293c8a79e747688fdad 161 Gene3D G3DSA:2.40.280.10 7 136 2.6E-43 T 12-10-2018 IPR023620 Small protein B Vc3S01_2601 62cd8e9112c63293c8a79e747688fdad 161 ProSitePatterns PS01317 SsrA-binding protein. 33 45 - T 12-10-2018 IPR020081 SsrA-binding protein, conserved site Vc3S01_2601 62cd8e9112c63293c8a79e747688fdad 161 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 15 139 4.0E-60 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 Vc3S01_2601 62cd8e9112c63293c8a79e747688fdad 161 Hamap MF_00023 SsrA-binding protein [smpB]. 1 161 68.216 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 Vc3S01_2601 62cd8e9112c63293c8a79e747688fdad 161 SUPERFAMILY SSF74982 8 139 1.57E-47 T 12-10-2018 IPR023620 Small protein B Vc3S01_2601 62cd8e9112c63293c8a79e747688fdad 161 Pfam PF01668 SmpB protein 15 157 4.6E-55 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 Vc3S01_p10058 12feff613572e6f01c8ddf93dc4db590 89 Gene3D G3DSA:1.10.10.60 1 81 8.5E-7 T 12-10-2018 Vc3S01_p10058 12feff613572e6f01c8ddf93dc4db590 89 SUPERFAMILY SSF46689 10 73 4.48E-6 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_p10058 12feff613572e6f01c8ddf93dc4db590 89 Pfam PF02954 Bacterial regulatory protein, Fis family 49 72 1.4E-5 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Vc3S01_A1817 b74123332204ff86e1cec124067ef817 295 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 43 233 6.0E-28 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Vc3S01_A1817 b74123332204ff86e1cec124067ef817 295 Gene3D G3DSA:2.40.30.170 170 294 1.5E-25 T 12-10-2018 Vc3S01_A1817 b74123332204ff86e1cec124067ef817 295 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 42 235 2.9E-16 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Vc3S01_A1817 b74123332204ff86e1cec124067ef817 295 SUPERFAMILY SSF111369 42 242 2.75E-22 T 12-10-2018 Vc3S01_A1817 b74123332204ff86e1cec124067ef817 295 Gene3D G3DSA:2.40.50.100 42 102 4.3E-13 T 12-10-2018 Vc3S01_A1451 5f94db66fc585c206371cd21fd0198f8 413 Pfam PF01566 Natural resistance-associated macrophage protein 58 380 6.7E-21 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 Vc3S01_A0446 a45c2bfb7310e95cac900adbafa26299 267 Pfam PF13411 MerR HTH family regulatory protein 10 76 4.4E-17 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Vc3S01_A0446 a45c2bfb7310e95cac900adbafa26299 267 SUPERFAMILY SSF46955 10 101 5.04E-17 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily Vc3S01_A0446 a45c2bfb7310e95cac900adbafa26299 267 SMART SM00422 10 79 2.8E-16 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Vc3S01_A0446 a45c2bfb7310e95cac900adbafa26299 267 Gene3D G3DSA:1.10.1660.10 4 76 6.1E-25 T 12-10-2018 Vc3S01_1696 323bcb9fd05552e72f2ea52537c79f3e 195 SUPERFAMILY SSF53448 7 189 3.11E-35 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Vc3S01_1696 323bcb9fd05552e72f2ea52537c79f3e 195 Gene3D G3DSA:3.90.550.10 3 193 5.2E-58 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Vc3S01_1696 323bcb9fd05552e72f2ea52537c79f3e 195 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 8 188 1.6E-73 T 12-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 Vc3S01_1696 323bcb9fd05552e72f2ea52537c79f3e 195 Pfam PF12804 MobA-like NTP transferase domain 10 158 5.0E-34 T 12-10-2018 IPR025877 MobA-like NTP transferase Vc3S01_1696 323bcb9fd05552e72f2ea52537c79f3e 195 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 5 190 30.082 T 12-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 Vc3S01_2982 c829413849865da6314d5670ccf5d83f 358 SUPERFAMILY SSF51735 1 337 2.8E-94 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_2982 c829413849865da6314d5670ccf5d83f 358 Gene3D G3DSA:3.90.25.10 201 333 4.5E-140 T 12-10-2018 Vc3S01_2982 c829413849865da6314d5670ccf5d83f 358 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 326 6.7E-100 T 12-10-2018 IPR016040 NAD(P)-binding domain Vc3S01_2982 c829413849865da6314d5670ccf5d83f 358 Gene3D G3DSA:3.40.50.720 2 325 4.5E-140 T 12-10-2018 Vc3S01_2982 c829413849865da6314d5670ccf5d83f 358 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 339 1.5E-160 T 12-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 Vc3S01_2294 8f0646e865e1218a102a257e441297aa 364 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 32 316 5.1E-42 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Vc3S01_2294 8f0646e865e1218a102a257e441297aa 364 Gene3D G3DSA:3.40.50.1100 51 157 1.6E-68 T 12-10-2018 Vc3S01_2294 8f0646e865e1218a102a257e441297aa 364 SUPERFAMILY SSF53686 23 336 5.76E-72 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Vc3S01_2294 8f0646e865e1218a102a257e441297aa 364 Gene3D G3DSA:3.40.50.1100 25 324 1.6E-68 T 12-10-2018 Vc3S01_A0117 25bc13869a3fb6ba71e9e41bff486b30 559 Gene3D G3DSA:3.30.2350.10 347 559 9.5E-59 T 12-10-2018 Vc3S01_A0117 25bc13869a3fb6ba71e9e41bff486b30 559 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 403 417 - T 12-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Vc3S01_A0117 25bc13869a3fb6ba71e9e41bff486b30 559 SUPERFAMILY SSF55120 350 556 1.2E-55 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Vc3S01_A0117 25bc13869a3fb6ba71e9e41bff486b30 559 Pfam PF00849 RNA pseudouridylate synthase 365 512 7.3E-28 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Vc3S01_1600 e26fce09afb421ea6884af571ef50d0a 232 Pfam PF06508 Queuosine biosynthesis protein QueC 3 212 1.4E-85 T 12-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 Vc3S01_1600 e26fce09afb421ea6884af571ef50d0a 232 PIRSF PIRSF006293 1 224 2.6E-84 T 12-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 Vc3S01_1600 e26fce09afb421ea6884af571ef50d0a 232 SUPERFAMILY SSF52402 1 211 3.53E-67 T 12-10-2018 Vc3S01_1600 e26fce09afb421ea6884af571ef50d0a 232 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 205 1.3E-83 T 12-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 Vc3S01_1600 e26fce09afb421ea6884af571ef50d0a 232 Gene3D G3DSA:3.40.50.620 1 230 2.6E-80 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Vc3S01_1600 e26fce09afb421ea6884af571ef50d0a 232 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 218 51.068 T 12-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 Vc3S01_A1786 aa49865fa5667230c812735714517ebd 199 Pfam PF07681 DoxX 23 111 2.9E-14 T 12-10-2018 IPR032808 DoxX family Vc3S01_A1462 72463697aa3d1a0e23d4159380c01443 305 PIRSF PIRSF009416 1 305 1.6E-175 T 12-10-2018 IPR003157 Acyl transferase, LuxD GO:0006631|GO:0016746 Vc3S01_A1462 72463697aa3d1a0e23d4159380c01443 305 SUPERFAMILY SSF53474 10 302 4.01E-29 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_A1462 72463697aa3d1a0e23d4159380c01443 305 Pfam PF02273 Acyl transferase 6 299 1.0E-175 T 12-10-2018 IPR003157 Acyl transferase, LuxD GO:0006631|GO:0016746 Vc3S01_A1462 72463697aa3d1a0e23d4159380c01443 305 Gene3D G3DSA:3.40.50.1820 1 305 2.8E-86 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_A1462 72463697aa3d1a0e23d4159380c01443 305 Hamap MF_00774 Acyl transferase [luxD]. 1 303 64.401 T 12-10-2018 IPR003157 Acyl transferase, LuxD GO:0006631|GO:0016746 Vc3S01_A1488 95472022f27444871c77329f1f855a29 139 Gene3D G3DSA:3.40.630.30 35 138 1.3E-24 T 12-10-2018 Vc3S01_A1488 95472022f27444871c77329f1f855a29 139 Pfam PF00583 Acetyltransferase (GNAT) family 31 115 3.0E-11 T 12-10-2018 IPR000182 GNAT domain Vc3S01_A1488 95472022f27444871c77329f1f855a29 139 SUPERFAMILY SSF55729 11 137 3.82E-25 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_0706 9791297fb6f16ba8aa9e0da341feaf49 229 Gene3D G3DSA:1.10.530.10 42 220 5.0E-49 T 12-10-2018 Vc3S01_0706 9791297fb6f16ba8aa9e0da341feaf49 229 Pfam PF11873 Domain of unknown function (DUF3393) 2 57 1.4E-21 T 12-10-2018 IPR024570 Murein transglycosylase-C, N-terminal Vc3S01_0706 9791297fb6f16ba8aa9e0da341feaf49 229 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 80 108 - T 12-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 Vc3S01_0706 9791297fb6f16ba8aa9e0da341feaf49 229 Pfam PF01464 Transglycosylase SLT domain 63 188 1.4E-28 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 Vc3S01_0706 9791297fb6f16ba8aa9e0da341feaf49 229 SUPERFAMILY SSF53955 39 222 4.5E-36 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily Vc3S01_0069 b00c2fdf2716d503c2bab52e033a4fbc 213 Pfam PF01810 LysE type translocator 10 206 1.6E-36 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Vc3S01_0069 b00c2fdf2716d503c2bab52e033a4fbc 213 PIRSF PIRSF006324 1 208 1.6E-47 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Vc3S01_A0734 df1e599a832ce983423a16d844447da8 44 Pfam PF09574 Protein of unknown function (Duf2374) 1 42 2.1E-24 T 12-10-2018 IPR014175 Conserved hypothetical protein CHP02808 Vc3S01_A0734 df1e599a832ce983423a16d844447da8 44 TIGRFAM TIGR02808 short_TIGR02808: TIGR02808 family protein 1 42 7.4E-24 T 12-10-2018 IPR014175 Conserved hypothetical protein CHP02808 Vc3S01_2985 4e9067d8a535a3bb01f47c0c9fac2426 278 Gene3D G3DSA:3.30.1890.10 88 248 1.3E-5 T 12-10-2018 Vc3S01_2985 4e9067d8a535a3bb01f47c0c9fac2426 278 Pfam PF13807 G-rich domain on putative tyrosine kinase 205 270 1.0E-7 T 12-10-2018 IPR032807 Tyrosine kinase, G-rich domain Vc3S01_A0464 5e8931fe92d41d8bc156ec9e97f81eb0 548 Pfam PF13584 Oxygen tolerance 17 460 3.9E-74 T 12-10-2018 IPR025738 Aerotolerance-related protein BatD Vc3S01_A0200 ad325006133e32bc87febd10e2c6c7f9 174 Pfam PF11286 Protein of unknown function (DUF3087) 1 171 4.1E-66 T 12-10-2018 IPR021438 Protein of unknown function DUF3087 Vc3S01_2695 ad0481f31471fb7c7aea7e8374ff45bc 368 SUPERFAMILY SSF51569 19 356 1.05E-138 T 12-10-2018 Vc3S01_2695 ad0481f31471fb7c7aea7e8374ff45bc 368 Pfam PF00793 DAHP synthetase I family 52 351 1.4E-105 T 12-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Vc3S01_2695 ad0481f31471fb7c7aea7e8374ff45bc 368 Gene3D G3DSA:3.20.20.70 14 359 1.4E-157 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_2695 ad0481f31471fb7c7aea7e8374ff45bc 368 PIRSF PIRSF001361 6 365 1.0E-164 T 12-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 Vc3S01_2695 ad0481f31471fb7c7aea7e8374ff45bc 368 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 20 357 8.2E-164 T 12-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 Vc3S01_0494 609f9e4fda48282541849657fe5bf1cc 231 Pfam PF04402 Protein of unknown function (DUF541) 30 228 4.0E-40 T 12-10-2018 IPR007497 Protein of unknown function DUF541 Vc3S01_0494 609f9e4fda48282541849657fe5bf1cc 231 Gene3D G3DSA:3.30.70.2970 42 149 1.7E-48 T 12-10-2018 Vc3S01_0494 609f9e4fda48282541849657fe5bf1cc 231 Gene3D G3DSA:3.30.110.170 32 228 1.7E-48 T 12-10-2018 Vc3S01_3155 83078fb42b0479cd667d426b68f1c50c 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 4.7E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Vc3S01_3155 83078fb42b0479cd667d426b68f1c50c 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 4.7E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Vc3S01_3155 83078fb42b0479cd667d426b68f1c50c 193 ProSitePatterns PS01081 TetR-type HTH domain signature. 25 56 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Vc3S01_3155 83078fb42b0479cd667d426b68f1c50c 193 SUPERFAMILY SSF46689 7 83 9.98E-19 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_3155 83078fb42b0479cd667d426b68f1c50c 193 Gene3D G3DSA:1.10.357.10 1 193 9.2E-75 T 12-10-2018 Vc3S01_3155 83078fb42b0479cd667d426b68f1c50c 193 Pfam PF16295 Tetracycline repressor, C-terminal all-alpha domain 65 190 6.1E-7 T 12-10-2018 IPR032551 HTH-type transcriptional repressor, C-terminal Vc3S01_3155 83078fb42b0479cd667d426b68f1c50c 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 59 2.2E-18 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Vc3S01_0289 a4be8b9271986ec969cae449ee2f5955 131 SUPERFAMILY SSF75169 6 131 4.32E-39 T 12-10-2018 IPR027396 DsrEFH-like Vc3S01_0289 a4be8b9271986ec969cae449ee2f5955 131 Pfam PF02635 DsrE/DsrF-like family 6 131 4.7E-29 T 12-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein Vc3S01_0289 a4be8b9271986ec969cae449ee2f5955 131 Gene3D G3DSA:3.40.1260.10 1 131 1.8E-54 T 12-10-2018 IPR027396 DsrEFH-like Vc3S01_0289 a4be8b9271986ec969cae449ee2f5955 131 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 5 131 3.6E-56 T 12-10-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 Vc3S01_0011 938e6dc8240d1cc173d4d1206268e5d2 504 SUPERFAMILY SSF52540 186 420 2.84E-16 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0011 938e6dc8240d1cc173d4d1206268e5d2 504 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 344 411 7.5E-13 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Vc3S01_3031 4a88de54afcdb59622d6416c705c4edd 210 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 132 209 5.6E-13 T 12-10-2018 IPR006260 TonB/TolA, C-terminal Vc3S01_3031 4a88de54afcdb59622d6416c705c4edd 210 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 130 208 3.4E-17 T 12-10-2018 IPR037682 TonB, C-terminal GO:0055085 Vc3S01_3031 4a88de54afcdb59622d6416c705c4edd 210 SUPERFAMILY SSF74653 122 207 1.15E-18 T 12-10-2018 Vc3S01_3031 4a88de54afcdb59622d6416c705c4edd 210 Gene3D G3DSA:3.30.1150.10 112 209 6.7E-22 T 12-10-2018 Vc3S01_p10055 7ef0ae2c362113d3216015af34464e5c 170 Pfam PF10502 Signal peptidase, peptidase S26 25 169 1.5E-32 T 12-10-2018 IPR019533 Peptidase S26 Vc3S01_p10055 7ef0ae2c362113d3216015af34464e5c 170 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 42 168 1.3E-15 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Vc3S01_p10055 7ef0ae2c362113d3216015af34464e5c 170 Gene3D G3DSA:2.10.109.10 34 169 2.2E-15 T 12-10-2018 Vc3S01_p10055 7ef0ae2c362113d3216015af34464e5c 170 TIGRFAM TIGR02771 TraF_Ti: conjugative transfer signal peptidase TraF 8 170 3.3E-47 T 12-10-2018 IPR014139 Peptidase S26C, conjugative transfer signal peptidase TraF GO:0000746|GO:0042597 Vc3S01_p10055 7ef0ae2c362113d3216015af34464e5c 170 SUPERFAMILY SSF51306 18 168 5.75E-27 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Vc3S01_2948 bc446df61550d17a08ed40fbc2a11bd7 183 Pfam PF00227 Proteasome subunit 2 169 1.5E-23 T 12-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 Vc3S01_2948 bc446df61550d17a08ed40fbc2a11bd7 183 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 172 4.1E-87 T 12-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 Vc3S01_2948 bc446df61550d17a08ed40fbc2a11bd7 183 SUPERFAMILY SSF56235 2 172 1.1E-57 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Vc3S01_2948 bc446df61550d17a08ed40fbc2a11bd7 183 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 42.105 T 12-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 Vc3S01_2948 bc446df61550d17a08ed40fbc2a11bd7 183 PIRSF PIRSF039093 1 175 7.8E-88 T 12-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 Vc3S01_2948 bc446df61550d17a08ed40fbc2a11bd7 183 Gene3D G3DSA:3.60.20.10 1 173 2.2E-67 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Vc3S01_A0467 2c6a30a721c830821d3b5aff97023a63 158 Pfam PF14316 Domain of unknown function (DUF4381) 9 145 6.5E-37 T 12-10-2018 IPR025489 Protein of unknown function (DUF4381 Vc3S01_2123 3c898147d576095c7f8c7d794f9376c3 1230 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 720 749 1.1E-4 T 12-10-2018 IPR006530 YD repeat Vc3S01_2123 3c898147d576095c7f8c7d794f9376c3 1230 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 924 964 9.4E-7 T 12-10-2018 IPR006530 YD repeat Vc3S01_2123 3c898147d576095c7f8c7d794f9376c3 1230 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1116 1147 0.0016 T 12-10-2018 IPR006530 YD repeat Vc3S01_2123 3c898147d576095c7f8c7d794f9376c3 1230 Pfam PF05593 RHS Repeat 730 764 9.3E-5 T 12-10-2018 IPR031325 RHS repeat Vc3S01_A0809 22b6063b2fde2f897a53e52c0e6c667a 275 SUPERFAMILY SSF53850 24 270 4.21E-65 T 12-10-2018 Vc3S01_A0809 22b6063b2fde2f897a53e52c0e6c667a 275 Gene3D G3DSA:3.40.190.10 26 269 5.1E-81 T 12-10-2018 Vc3S01_A0809 22b6063b2fde2f897a53e52c0e6c667a 275 Pfam PF12727 PBP superfamily domain 40 254 4.9E-36 T 12-10-2018 IPR024370 PBP domain Vc3S01_A0809 22b6063b2fde2f897a53e52c0e6c667a 275 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 19 269 2.0E-66 T 12-10-2018 IPR011862 Phosphate binding protein GO:0042301 Vc3S01_A0809 22b6063b2fde2f897a53e52c0e6c667a 275 Gene3D G3DSA:3.40.190.10 97 231 5.1E-81 T 12-10-2018 Vc3S01_A1333 295c44f8a1de834b5a4a1b391fdd8c07 159 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 67 105 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 Vc3S01_A1333 295c44f8a1de834b5a4a1b391fdd8c07 159 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 20 117 1.1E-18 T 12-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain Vc3S01_A1333 295c44f8a1de834b5a4a1b391fdd8c07 159 SUPERFAMILY SSF53927 20 155 2.3E-42 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Vc3S01_A1333 295c44f8a1de834b5a4a1b391fdd8c07 159 Gene3D G3DSA:3.40.140.10 9 158 1.5E-41 T 12-10-2018 Vc3S01_3190 3319d475477e17b51ded5f5dabca115d 318 Pfam PF11059 Protein of unknown function (DUF2860) 26 317 1.7E-110 T 12-10-2018 IPR016896 Protein of unknown function DUF2860 Vc3S01_3190 3319d475477e17b51ded5f5dabca115d 318 PIRSF PIRSF028696 1 318 1.7E-118 T 12-10-2018 IPR016896 Protein of unknown function DUF2860 Vc3S01_A1393 549af77576364f055ec1a79d551cd9b1 225 Pfam PF09335 SNARE associated Golgi protein 55 173 9.1E-17 T 12-10-2018 IPR032816 SNARE associated Golgi protein Vc3S01_1900 4076ca5aaf822ed794bd3d1df1c848c2 207 Pfam PF03496 ADP-ribosyltransferase exoenzyme 63 168 4.1E-11 T 12-10-2018 IPR003540 ADP ribosyltransferase GO:0005576|GO:0009405 Vc3S01_1900 4076ca5aaf822ed794bd3d1df1c848c2 207 Gene3D G3DSA:3.90.176.10 11 180 1.9E-17 T 12-10-2018 Vc3S01_1900 4076ca5aaf822ed794bd3d1df1c848c2 207 SUPERFAMILY SSF56399 9 177 7.04E-35 T 12-10-2018 Vc3S01_A0355 e3462d5366f9bf8f05feced13a6a3cd7 128 Gene3D G3DSA:1.20.120.340 1 127 1.3E-35 T 12-10-2018 Vc3S01_A0355 e3462d5366f9bf8f05feced13a6a3cd7 128 Pfam PF02561 Flagellar protein FliS 7 122 2.3E-32 T 12-10-2018 IPR003713 Flagellar protein FliS GO:0044780 Vc3S01_A0355 e3462d5366f9bf8f05feced13a6a3cd7 128 PIRSF PIRSF039090 1 128 3.0E-39 T 12-10-2018 IPR003713 Flagellar protein FliS GO:0044780 Vc3S01_A0355 e3462d5366f9bf8f05feced13a6a3cd7 128 TIGRFAM TIGR00208 fliS: flagellar protein FliS 1 123 4.4E-24 T 12-10-2018 IPR003713 Flagellar protein FliS GO:0044780 Vc3S01_A0355 e3462d5366f9bf8f05feced13a6a3cd7 128 SUPERFAMILY SSF101116 9 126 6.93E-36 T 12-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 Vc3S01_A1175 d6e55dca628e0d1128b258fb759ceab8 107 SUPERFAMILY SSF50022 1 106 1.63E-34 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Vc3S01_A1175 d6e55dca628e0d1128b258fb759ceab8 107 Gene3D G3DSA:2.102.10.10 1 107 1.9E-32 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Vc3S01_A1175 d6e55dca628e0d1128b258fb759ceab8 107 Pfam PF13806 Rieske-like [2Fe-2S] domain 3 105 2.2E-39 T 12-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 Vc3S01_A1175 d6e55dca628e0d1128b258fb759ceab8 107 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 4 106 5.1E-34 T 12-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 Vc3S01_1952 8e95105ccb8dc16500266c1a13790540 414 Gene3D G3DSA:1.20.1090.10 187 382 2.4E-40 T 12-10-2018 Vc3S01_1952 8e95105ccb8dc16500266c1a13790540 414 Gene3D G3DSA:3.40.50.1970 1 180 3.5E-48 T 12-10-2018 Vc3S01_1952 8e95105ccb8dc16500266c1a13790540 414 SUPERFAMILY SSF56796 1 380 1.83E-88 T 12-10-2018 Vc3S01_1952 8e95105ccb8dc16500266c1a13790540 414 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 372 2.8E-90 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 Vc3S01_A0414 85205b79517fb85d8156920fa79af87d 367 Pfam PF00924 Mechanosensitive ion channel 138 341 1.1E-56 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 Vc3S01_A0414 85205b79517fb85d8156920fa79af87d 367 SUPERFAMILY SSF82861 97 179 3.53E-14 T 12-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 Vc3S01_A0414 85205b79517fb85d8156920fa79af87d 367 SUPERFAMILY SSF82689 252 351 2.88E-18 T 12-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 Vc3S01_A0414 85205b79517fb85d8156920fa79af87d 367 Gene3D G3DSA:2.30.30.60 196 248 3.1E-10 T 12-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily Vc3S01_A0414 85205b79517fb85d8156920fa79af87d 367 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 212 246 - T 12-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 Vc3S01_A0414 85205b79517fb85d8156920fa79af87d 367 Gene3D G3DSA:3.30.70.100 249 346 3.0E-14 T 12-10-2018 Vc3S01_A0414 85205b79517fb85d8156920fa79af87d 367 SUPERFAMILY SSF50182 180 247 6.54E-18 T 12-10-2018 IPR010920 LSM domain superfamily Vc3S01_0126 7127e4c431210b589960d8fbf63e60d4 106 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 2 105 31.999 T 12-10-2018 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927 Vc3S01_0126 7127e4c431210b589960d8fbf63e60d4 106 Pfam PF00581 Rhodanese-like domain 13 98 2.7E-11 T 12-10-2018 IPR001763 Rhodanese-like domain Vc3S01_0126 7127e4c431210b589960d8fbf63e60d4 106 SUPERFAMILY SSF52821 1 105 1.57E-28 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily Vc3S01_0126 7127e4c431210b589960d8fbf63e60d4 106 Gene3D G3DSA:3.40.250.10 1 101 7.8E-26 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily Vc3S01_0126 7127e4c431210b589960d8fbf63e60d4 106 SMART SM00450 7 102 7.6E-18 T 12-10-2018 IPR001763 Rhodanese-like domain Vc3S01_1157 62885b509e774a22c59c82d36cd6eef6 721 Gene3D G3DSA:3.40.50.300 330 500 1.9E-6 T 12-10-2018 Vc3S01_1157 62885b509e774a22c59c82d36cd6eef6 721 SUPERFAMILY SSF52540 8 497 2.81E-7 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_1338 add85e27ef82ba31678dd74d9cd55e45 63 Gene3D G3DSA:1.20.120.1620 1 62 3.9E-9 T 12-10-2018 IPR038314 T6SS superfamily Vc3S01_1460 4c3df3563b759928ec9217b097c4fe5a 171 Pfam PF13505 Outer membrane protein beta-barrel domain 6 170 4.4E-20 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel Vc3S01_1460 4c3df3563b759928ec9217b097c4fe5a 171 Gene3D G3DSA:2.40.160.20 18 170 5.2E-26 T 12-10-2018 Vc3S01_1460 4c3df3563b759928ec9217b097c4fe5a 171 SUPERFAMILY SSF56925 17 170 6.8E-29 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel Vc3S01_2653 6b8bc09a17ce52ff9c224fb834caea35 148 Gene3D G3DSA:3.10.580.10 1 148 9.8E-50 T 12-10-2018 Vc3S01_2653 6b8bc09a17ce52ff9c224fb834caea35 148 SUPERFAMILY SSF54631 1 132 9.1E-33 T 12-10-2018 Vc3S01_2653 6b8bc09a17ce52ff9c224fb834caea35 148 SMART SM00116 84 131 5.0E-6 T 12-10-2018 IPR000644 CBS domain Vc3S01_2653 6b8bc09a17ce52ff9c224fb834caea35 148 SMART SM00116 11 59 8.5E-9 T 12-10-2018 IPR000644 CBS domain Vc3S01_2653 6b8bc09a17ce52ff9c224fb834caea35 148 Pfam PF00571 CBS domain 79 127 4.6E-9 T 12-10-2018 IPR000644 CBS domain Vc3S01_2653 6b8bc09a17ce52ff9c224fb834caea35 148 Pfam PF00571 CBS domain 4 58 4.6E-13 T 12-10-2018 IPR000644 CBS domain Vc3S01_0859 135ff668195be7e4e8a2a0ea718e867a 669 Gene3D G3DSA:3.30.750.140 518 632 9.8E-32 T 12-10-2018 IPR038610 FliK-like, C-terminal domain superfamily Vc3S01_0859 135ff668195be7e4e8a2a0ea718e867a 669 PRINTS PR01007 Flagellar hook-length control protein signature 309 322 4.3E-7 T 12-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 Vc3S01_0859 135ff668195be7e4e8a2a0ea718e867a 669 PRINTS PR01007 Flagellar hook-length control protein signature 587 610 4.3E-7 T 12-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 Vc3S01_0859 135ff668195be7e4e8a2a0ea718e867a 669 PRINTS PR01007 Flagellar hook-length control protein signature 554 572 4.3E-7 T 12-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 Vc3S01_0859 135ff668195be7e4e8a2a0ea718e867a 669 Pfam PF02120 Flagellar hook-length control protein FliK 539 622 2.8E-25 T 12-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal Vc3S01_2099 acccaa533a6452041988f86c366473ae 442 Gene3D G3DSA:3.60.10.10 169 441 9.7E-63 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Vc3S01_2099 acccaa533a6452041988f86c366473ae 442 SUPERFAMILY SSF56219 175 440 6.41E-63 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Vc3S01_2099 acccaa533a6452041988f86c366473ae 442 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 181 402 8.5E-9 T 12-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase Vc3S01_3047 a6dfd4e25f42a90e1bc9f2c7a8484471 241 Gene3D G3DSA:3.40.50.2020 107 238 7.1E-17 T 12-10-2018 Vc3S01_3047 a6dfd4e25f42a90e1bc9f2c7a8484471 241 SUPERFAMILY SSF53271 65 238 3.02E-32 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like Vc3S01_3047 a6dfd4e25f42a90e1bc9f2c7a8484471 241 Pfam PF00156 Phosphoribosyl transferase domain 145 237 3.9E-13 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Vc3S01_A1240 bc5d17218d726e850f725ef9c6a4926b 122 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 1 121 1.6E-56 T 12-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 Vc3S01_A1240 bc5d17218d726e850f725ef9c6a4926b 122 SUPERFAMILY SSF54593 1 120 9.26E-34 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Vc3S01_A1240 bc5d17218d726e850f725ef9c6a4926b 122 Gene3D G3DSA:3.10.180.10 1 122 1.2E-44 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Vc3S01_A1240 bc5d17218d726e850f725ef9c6a4926b 122 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 117 3.7E-23 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Vc3S01_0104 1c8379b9b8b3e6baff2d0d35614ba859 329 Gene3D G3DSA:3.40.50.1820 29 329 7.2E-52 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_0104 1c8379b9b8b3e6baff2d0d35614ba859 329 SUPERFAMILY SSF53474 41 317 4.09E-45 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_0104 1c8379b9b8b3e6baff2d0d35614ba859 329 Pfam PF12146 Serine aminopeptidase, S33 53 310 2.3E-58 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 Vc3S01_0931 070eace7959f2f765e504c7b81cb2a6c 425 Pfam PF03313 Serine dehydratase alpha chain 151 420 5.4E-52 T 12-10-2018 IPR005130 Serine dehydratase-like, alpha subunit Vc3S01_0931 070eace7959f2f765e504c7b81cb2a6c 425 Hamap MF_01845 UPF0597 protein YhaM [yhaM]. 4 425 34.486 T 12-10-2018 IPR021144 Uncharacterised protein family UPF0597 Vc3S01_0931 070eace7959f2f765e504c7b81cb2a6c 425 PIRSF PIRSF006054 1 425 2.9E-186 T 12-10-2018 IPR021144 Uncharacterised protein family UPF0597 Vc3S01_2478 8c5d719d3057c26cb73ac70b83936255 104 Pfam PF04316 Anti-sigma-28 factor, FlgM 41 94 2.7E-18 T 12-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal Vc3S01_2478 8c5d719d3057c26cb73ac70b83936255 104 SUPERFAMILY SSF101498 2 97 4.32E-22 T 12-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily Vc3S01_2478 8c5d719d3057c26cb73ac70b83936255 104 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 4 97 2.3E-23 T 12-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 Vc3S01_p20007 184d9c8ea249e71c9ed83ab02d71e0b4 358 Pfam PF14319 Transposase zinc-binding domain 9 114 3.8E-34 T 12-10-2018 IPR026889 Transposase zinc-binding domain Vc3S01_p20007 184d9c8ea249e71c9ed83ab02d71e0b4 358 Pfam PF04986 Putative transposase 138 301 2.1E-48 T 12-10-2018 IPR007069 Transposase, IS801/IS1294 GO:0003677|GO:0004803|GO:0006313 Vc3S01_A1623 38403562fc33be6694f480f5d2cca601 239 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 237 2.5E-61 T 12-10-2018 Vc3S01_A1623 38403562fc33be6694f480f5d2cca601 239 SUPERFAMILY SSF51735 4 238 3.71E-80 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_A1623 38403562fc33be6694f480f5d2cca601 239 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 132 160 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Vc3S01_A1623 38403562fc33be6694f480f5d2cca601 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 221 4.3E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A1623 38403562fc33be6694f480f5d2cca601 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 4.3E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A1623 38403562fc33be6694f480f5d2cca601 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 4.3E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A1623 38403562fc33be6694f480f5d2cca601 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 4.3E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A1623 38403562fc33be6694f480f5d2cca601 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 4.3E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A1623 38403562fc33be6694f480f5d2cca601 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 4.3E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A1623 38403562fc33be6694f480f5d2cca601 239 Gene3D G3DSA:3.40.50.720 1 239 1.6E-81 T 12-10-2018 Vc3S01_A1623 38403562fc33be6694f480f5d2cca601 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 3.4E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A1623 38403562fc33be6694f480f5d2cca601 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 3.4E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A1623 38403562fc33be6694f480f5d2cca601 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 3.4E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Vc3S01_A1623 38403562fc33be6694f480f5d2cca601 239 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 183 5.7E-4 T 12-10-2018 Vc3S01_2853 c8f3803f423951243acdc0c1171dfecd 348 Gene3D G3DSA:3.40.50.2000 195 315 6.9E-6 T 12-10-2018 Vc3S01_2853 c8f3803f423951243acdc0c1171dfecd 348 Pfam PF13528 Glycosyl transferase family 1 1 300 1.4E-37 T 12-10-2018 Vc3S01_2853 c8f3803f423951243acdc0c1171dfecd 348 TIGRFAM TIGR00661 MJ1255: conserved hypothetical protein 2 311 5.6E-105 T 12-10-2018 IPR005262 Conserved hypothetical protein CHP00661 Vc3S01_2853 c8f3803f423951243acdc0c1171dfecd 348 SUPERFAMILY SSF53756 1 298 1.1E-11 T 12-10-2018 Vc3S01_A1686 07958c687c21855d0a44ea76d6d88f3d 527 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 36 514 4.9E-145 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 Vc3S01_0196 d4d0f58969749cb3ef2cb26269a86330 210 SUPERFAMILY SSF53098 27 198 7.19E-35 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Vc3S01_0196 d4d0f58969749cb3ef2cb26269a86330 210 SMART SM00479 29 202 1.5E-26 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Vc3S01_0196 d4d0f58969749cb3ef2cb26269a86330 210 Pfam PF00929 Exonuclease 31 193 4.1E-20 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Vc3S01_0196 d4d0f58969749cb3ef2cb26269a86330 210 Gene3D G3DSA:3.30.420.10 23 201 9.3E-34 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Vc3S01_1153 fb66837914edd0d30c3eac8b89e15c0e 230 SMART SM00382 35 222 6.1E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_1153 fb66837914edd0d30c3eac8b89e15c0e 230 Pfam PF00005 ABC transporter 26 174 4.2E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_1153 fb66837914edd0d30c3eac8b89e15c0e 230 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_1153 fb66837914edd0d30c3eac8b89e15c0e 230 SUPERFAMILY SSF52540 6 226 1.5E-75 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_1153 fb66837914edd0d30c3eac8b89e15c0e 230 Gene3D G3DSA:3.40.50.300 4 230 3.5E-72 T 12-10-2018 Vc3S01_0618 2ea69c5889a954ab44684e65fe36db64 456 SUPERFAMILY SSF56601 8 420 7.01E-85 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Vc3S01_0618 2ea69c5889a954ab44684e65fe36db64 456 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 12 419 3.0E-101 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Vc3S01_0618 2ea69c5889a954ab44684e65fe36db64 456 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 38 57 3.2E-30 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Vc3S01_0618 2ea69c5889a954ab44684e65fe36db64 456 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 257 279 3.2E-30 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Vc3S01_0618 2ea69c5889a954ab44684e65fe36db64 456 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 395 408 3.2E-30 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Vc3S01_0618 2ea69c5889a954ab44684e65fe36db64 456 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 331 345 3.2E-30 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Vc3S01_0618 2ea69c5889a954ab44684e65fe36db64 456 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 316 330 3.2E-30 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Vc3S01_0618 2ea69c5889a954ab44684e65fe36db64 456 Gene3D G3DSA:3.50.80.20 63 156 2.8E-13 T 12-10-2018 Vc3S01_0618 2ea69c5889a954ab44684e65fe36db64 456 Gene3D G3DSA:3.40.710.10 215 449 5.0E-53 T 12-10-2018 Vc3S01_0618 2ea69c5889a954ab44684e65fe36db64 456 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 34 418 2.6E-103 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Vc3S01_2520 653a31ad925e8b3eb047494b207b0a6a 185 Gene3D G3DSA:3.30.160.150 19 167 1.3E-49 T 12-10-2018 Vc3S01_2520 653a31ad925e8b3eb047494b207b0a6a 185 Pfam PF04390 Lipopolysaccharide-assembly 45 159 7.0E-13 T 12-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 Vc3S01_2520 653a31ad925e8b3eb047494b207b0a6a 185 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 7 164 23.98 T 12-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 Vc3S01_A1535 14f86b9a9b18f758961a359d89ae65c6 506 Gene3D G3DSA:1.20.1730.10 6 484 1.1E-72 T 12-10-2018 IPR038377 Sodium/glucose symporter superfamily Vc3S01_A1535 14f86b9a9b18f758961a359d89ae65c6 506 Pfam PF00474 Sodium:solute symporter family 34 416 8.1E-45 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Vc3S01_1405 46855d116c29fbf20d020696cff13a3a 472 Pfam PF00939 Sodium:sulfate symporter transmembrane region 5 462 4.2E-51 T 12-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 Vc3S01_1405 46855d116c29fbf20d020696cff13a3a 472 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 35 462 9.9E-79 T 12-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 Vc3S01_1405 46855d116c29fbf20d020696cff13a3a 472 PIRSF PIRSF002457 1 472 5.1E-120 T 12-10-2018 IPR030676 Citrate carrier CitT-related Vc3S01_0111 8f573d44e4316b55baeabe8c57c285dc 100 Pfam PF00031 Cystatin domain 26 81 2.6E-9 T 12-10-2018 IPR000010 Cystatin domain GO:0004869 Vc3S01_0111 8f573d44e4316b55baeabe8c57c285dc 100 Gene3D G3DSA:3.10.450.10 14 99 3.4E-10 T 12-10-2018 Vc3S01_0111 8f573d44e4316b55baeabe8c57c285dc 100 SUPERFAMILY SSF54403 17 89 2.76E-17 T 12-10-2018 Vc3S01_2747 f9c099cb57d986ba0c9b8656c8e2ad9c 160 Pfam PF03737 Aldolase/RraA 5 152 1.4E-41 T 12-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein Vc3S01_2747 f9c099cb57d986ba0c9b8656c8e2ad9c 160 SUPERFAMILY SSF89562 1 158 1.31E-46 T 12-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily Vc3S01_2747 f9c099cb57d986ba0c9b8656c8e2ad9c 160 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 153 9.5E-69 T 12-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 Vc3S01_2747 f9c099cb57d986ba0c9b8656c8e2ad9c 160 Gene3D G3DSA:3.50.30.40 1 160 7.7E-65 T 12-10-2018 Vc3S01_0926 b300d75eef051062c64be346e7b10f93 109 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 1 105 4.9E-40 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Vc3S01_0926 b300d75eef051062c64be346e7b10f93 109 Gene3D G3DSA:3.30.1310.10 1 109 6.4E-48 T 12-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily Vc3S01_0926 b300d75eef051062c64be346e7b10f93 109 Pfam PF02575 YbaB/EbfC DNA-binding family 11 100 1.7E-35 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Vc3S01_0926 b300d75eef051062c64be346e7b10f93 109 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 98 23.388 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Vc3S01_0926 b300d75eef051062c64be346e7b10f93 109 PIRSF PIRSF004555 3 109 2.8E-40 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Vc3S01_0926 b300d75eef051062c64be346e7b10f93 109 SUPERFAMILY SSF82607 11 103 1.7E-36 T 12-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily Vc3S01_0899 ab3aede5cb1eecdc384001120c95cdee 176 Hamap MF_01042 UPF0115 protein YfcN [yfcN]. 1 173 39.149 T 12-10-2018 IPR022990 Uncharacterised protein family UPF0115 Vc3S01_0899 ab3aede5cb1eecdc384001120c95cdee 176 SMART SM00463 94 172 1.5E-15 T 12-10-2018 IPR002625 Smr domain Vc3S01_0899 ab3aede5cb1eecdc384001120c95cdee 176 Pfam PF01713 Smr domain 97 171 2.0E-17 T 12-10-2018 IPR002625 Smr domain Vc3S01_0899 ab3aede5cb1eecdc384001120c95cdee 176 Gene3D G3DSA:3.30.1370.110 49 175 1.5E-27 T 12-10-2018 Vc3S01_0899 ab3aede5cb1eecdc384001120c95cdee 176 SUPERFAMILY SSF160443 95 171 2.48E-11 T 12-10-2018 IPR036063 Smr domain superfamily Vc3S01_0582 311ca7959011d00b346ac1dc071a0d69 287 Gene3D G3DSA:3.40.50.620 79 214 2.8E-105 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Vc3S01_0582 311ca7959011d00b346ac1dc071a0d69 287 PRINTS PR00987 Glutamyl-tRNA synthetase signature 182 190 1.0E-13 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Vc3S01_0582 311ca7959011d00b346ac1dc071a0d69 287 PRINTS PR00987 Glutamyl-tRNA synthetase signature 7 19 1.0E-13 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Vc3S01_0582 311ca7959011d00b346ac1dc071a0d69 287 PRINTS PR00987 Glutamyl-tRNA synthetase signature 166 176 1.0E-13 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Vc3S01_0582 311ca7959011d00b346ac1dc071a0d69 287 PRINTS PR00987 Glutamyl-tRNA synthetase signature 21 32 1.0E-13 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Vc3S01_0582 311ca7959011d00b346ac1dc071a0d69 287 PRINTS PR00987 Glutamyl-tRNA synthetase signature 36 49 1.0E-13 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Vc3S01_0582 311ca7959011d00b346ac1dc071a0d69 287 SUPERFAMILY SSF52374 4 280 8.16E-84 T 12-10-2018 Vc3S01_0582 311ca7959011d00b346ac1dc071a0d69 287 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 4 267 3.1E-111 T 12-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 Vc3S01_0582 311ca7959011d00b346ac1dc071a0d69 287 Gene3D G3DSA:3.40.50.620 4 280 2.8E-105 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Vc3S01_0582 311ca7959011d00b346ac1dc071a0d69 287 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 4 286 39.909 T 12-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 Vc3S01_0582 311ca7959011d00b346ac1dc071a0d69 287 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 7 263 4.4E-42 T 12-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 Vc3S01_2546 9679aabd51585a07721652846d1f420b 281 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 281 164.029 T 12-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 Vc3S01_2546 9679aabd51585a07721652846d1f420b 281 SUPERFAMILY SSF55620 184 267 6.08E-10 T 12-10-2018 Vc3S01_2546 9679aabd51585a07721652846d1f420b 281 Gene3D G3DSA:3.30.1130.10 21 138 3.4E-45 T 12-10-2018 Vc3S01_2546 9679aabd51585a07721652846d1f420b 281 Pfam PF14489 QueF-like protein 194 270 1.4E-26 T 12-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 Vc3S01_2546 9679aabd51585a07721652846d1f420b 281 TIGRFAM TIGR03138 QueF: queuine synthase 11 281 2.5E-127 T 12-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 Vc3S01_2546 9679aabd51585a07721652846d1f420b 281 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 21 129 4.7E-48 T 12-10-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 Vc3S01_2546 9679aabd51585a07721652846d1f420b 281 PIRSF PIRSF004750 6 281 1.3E-129 T 12-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 Vc3S01_2546 9679aabd51585a07721652846d1f420b 281 Gene3D G3DSA:3.30.1130.10 143 281 7.6E-63 T 12-10-2018 Vc3S01_A1593 fd5fe5d41ff55ee13c8ce1aa5305c801 282 Pfam PF01734 Patatin-like phospholipase 9 175 5.7E-18 T 12-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 Vc3S01_A1593 fd5fe5d41ff55ee13c8ce1aa5305c801 282 SUPERFAMILY SSF52151 6 279 6.02E-36 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Vc3S01_A1593 fd5fe5d41ff55ee13c8ce1aa5305c801 282 Gene3D G3DSA:3.40.1090.10 92 206 1.2E-8 T 12-10-2018 Vc3S01_A1593 fd5fe5d41ff55ee13c8ce1aa5305c801 282 Gene3D G3DSA:3.40.1090.10 2 91 1.4E-9 T 12-10-2018 Vc3S01_A0092 36f0ea2a52679dd68caa563c91de3b8f 432 Gene3D G3DSA:2.40.170.10 66 432 5.5E-72 T 12-10-2018 IPR036998 Porin, LamB-type superfamily GO:0015288|GO:0016020|GO:0034219 Vc3S01_A0092 36f0ea2a52679dd68caa563c91de3b8f 432 SUPERFAMILY SSF56935 67 432 3.34E-94 T 12-10-2018 Vc3S01_A0092 36f0ea2a52679dd68caa563c91de3b8f 432 Pfam PF02264 LamB porin 68 432 1.5E-78 T 12-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 Vc3S01_A0092 36f0ea2a52679dd68caa563c91de3b8f 432 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 98 403 3.0E-51 T 12-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 Vc3S01_1972 a0a85744392d23bda8914f5272868ae5 456 Gene3D G3DSA:3.30.70.270 299 455 1.1E-40 T 12-10-2018 Vc3S01_1972 a0a85744392d23bda8914f5272868ae5 456 Pfam PF00990 Diguanylate cyclase, GGDEF domain 301 448 1.6E-34 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_1972 a0a85744392d23bda8914f5272868ae5 456 SMART SM00267 287 454 7.7E-34 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_1972 a0a85744392d23bda8914f5272868ae5 456 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 300 449 1.4E-34 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_1972 a0a85744392d23bda8914f5272868ae5 456 SUPERFAMILY SSF55073 306 449 1.02E-33 T 12-10-2018 IPR029787 Nucleotide cyclase Vc3S01_A1105 6eaf9a629f2b95e806524ada8c9e9212 103 TIGRFAM TIGR01158 SUI1_rel: putative translation initiation factor SUI1 3 103 4.3E-39 T 12-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 Vc3S01_A1105 6eaf9a629f2b95e806524ada8c9e9212 103 Pfam PF01253 Translation initiation factor SUI1 27 96 1.7E-19 T 12-10-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 Vc3S01_A1105 6eaf9a629f2b95e806524ada8c9e9212 103 SUPERFAMILY SSF55159 3 99 7.19E-27 T 12-10-2018 IPR036877 SUI1 domain superfamily GO:0003743|GO:0006413 Vc3S01_A1105 6eaf9a629f2b95e806524ada8c9e9212 103 PIRSF PIRSF037511 1 103 2.1E-33 T 12-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 Vc3S01_A1105 6eaf9a629f2b95e806524ada8c9e9212 103 Gene3D G3DSA:3.30.780.10 23 103 2.1E-33 T 12-10-2018 Vc3S01_A1402 50ca077db42ff42889c05d992ec10cb5 323 SUPERFAMILY SSF46626 179 316 3.69E-31 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Vc3S01_A1402 50ca077db42ff42889c05d992ec10cb5 323 Gene3D G3DSA:1.10.760.10 48 192 2.4E-87 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Vc3S01_A1402 50ca077db42ff42889c05d992ec10cb5 323 Gene3D G3DSA:1.10.760.10 193 312 2.4E-87 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Vc3S01_A1402 50ca077db42ff42889c05d992ec10cb5 323 Pfam PF03150 Di-haem cytochrome c peroxidase 49 192 4.0E-38 T 12-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 Vc3S01_A1402 50ca077db42ff42889c05d992ec10cb5 323 Pfam PF00034 Cytochrome c 201 309 5.2E-5 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A1402 50ca077db42ff42889c05d992ec10cb5 323 SUPERFAMILY SSF46626 34 180 2.15E-37 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Vc3S01_A1402 50ca077db42ff42889c05d992ec10cb5 323 PIRSF PIRSF000294 3 318 1.1E-77 T 12-10-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 Vc3S01_A0770 bbf3ae67355913ecfd0710ab1d205d84 331 SUPERFAMILY SSF52317 1 155 7.78E-46 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Vc3S01_A0770 bbf3ae67355913ecfd0710ab1d205d84 331 Gene3D G3DSA:3.50.30.60 165 330 1.1E-47 T 12-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily Vc3S01_A0770 bbf3ae67355913ecfd0710ab1d205d84 331 SUPERFAMILY SSF141986 172 324 1.83E-37 T 12-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily Vc3S01_A0770 bbf3ae67355913ecfd0710ab1d205d84 331 Gene3D G3DSA:3.40.50.10740 1 161 5.2E-60 T 12-10-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal Vc3S01_A0770 bbf3ae67355913ecfd0710ab1d205d84 331 PIRSF PIRSF028757 1 330 7.5E-89 T 12-10-2018 IPR003507 Peptidase family S66 Vc3S01_A0770 bbf3ae67355913ecfd0710ab1d205d84 331 Pfam PF02016 LD-carboxypeptidase 13 318 8.1E-70 T 12-10-2018 IPR003507 Peptidase family S66 Vc3S01_0419 8ed9a52eddce09086137653c99329cfb 165 PIRSF PIRSF028513 7 163 1.6E-28 T 12-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 Vc3S01_0419 8ed9a52eddce09086137653c99329cfb 165 Gene3D G3DSA:2.60.450.10 37 164 3.5E-38 T 12-10-2018 Vc3S01_0419 8ed9a52eddce09086137653c99329cfb 165 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 8 161 3.2E-41 T 12-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related Vc3S01_0419 8ed9a52eddce09086137653c99329cfb 165 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 5 160 3.2E-42 T 12-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 Vc3S01_A1405 69e032c9879051f6d8e42a442f209377 555 PIRSF PIRSF011521 2 543 7.1E-184 T 12-10-2018 IPR014460 Signal transduction response regulator, predicted, VieB Vc3S01_A1405 69e032c9879051f6d8e42a442f209377 555 SMART SM00448 9 127 9.9E-20 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A1405 69e032c9879051f6d8e42a442f209377 555 Pfam PF00072 Response regulator receiver domain 11 127 5.0E-17 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_A1405 69e032c9879051f6d8e42a442f209377 555 SUPERFAMILY SSF48452 171 300 1.11E-11 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_A1405 69e032c9879051f6d8e42a442f209377 555 Gene3D G3DSA:1.25.40.10 137 303 1.0E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_A1405 69e032c9879051f6d8e42a442f209377 555 SUPERFAMILY SSF52172 7 142 7.54E-25 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_A1405 69e032c9879051f6d8e42a442f209377 555 Gene3D G3DSA:3.40.50.2300 1 136 2.9E-22 T 12-10-2018 Vc3S01_0681 ed2ecd44ce0746e36891252119748b04 315 Pfam PF00482 Type II secretion system (T2SS), protein F 174 302 4.8E-24 T 12-10-2018 IPR018076 Type II secretion system F domain Vc3S01_0681 ed2ecd44ce0746e36891252119748b04 315 Gene3D G3DSA:1.20.81.30 159 279 2.1E-7 T 12-10-2018 Vc3S01_A0611 2d691657e5902a346c9c1013816e627b 205 SUPERFAMILY SSF53474 3 179 4.18E-15 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_A0611 2d691657e5902a346c9c1013816e627b 205 Pfam PF07819 PGAP1-like protein 50 137 6.9E-6 T 12-10-2018 IPR012908 GPI inositol-deacylase PGAP1-like GO:0016788 Reactome: R-HSA-162791 Vc3S01_p40008 aa3ec85cc8940020b1c94f4990892d09 541 Gene3D G3DSA:3.30.450.90 86 224 5.8E-9 T 12-10-2018 Vc3S01_p40008 aa3ec85cc8940020b1c94f4990892d09 541 Pfam PF00437 Type II/IV secretion system protein 188 372 2.3E-27 T 12-10-2018 IPR001482 Type II/IV secretion system protein Vc3S01_p40008 aa3ec85cc8940020b1c94f4990892d09 541 Gene3D G3DSA:3.40.50.300 225 525 1.4E-56 T 12-10-2018 Vc3S01_p40008 aa3ec85cc8940020b1c94f4990892d09 541 SUPERFAMILY SSF52540 102 521 2.7E-35 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A1447 7348c54da47d9dfba6484598dee53d37 139 SUPERFAMILY SSF47413 2 61 7.88E-6 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Vc3S01_A1447 7348c54da47d9dfba6484598dee53d37 139 Gene3D G3DSA:1.10.260.40 2 66 7.8E-6 T 12-10-2018 Vc3S01_2487 0897b716877f3218145e9b3f0b648c54 198 Hamap MF_00789 UPF0319 protein YccT [yccT]. 4 195 23.763 T 12-10-2018 IPR018635 Uncharacterised protein family UPF0319 Vc3S01_2487 0897b716877f3218145e9b3f0b648c54 198 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 23 192 1.5E-31 T 12-10-2018 IPR018635 Uncharacterised protein family UPF0319 Vc3S01_2717 5c7e516e0281a5cc19a3d061ad6e135f 263 Pfam PF01925 Sulfite exporter TauE/SafE 9 261 3.5E-51 T 12-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 Vc3S01_A1143 c64fee35b3841adf037a2426107276e1 210 Pfam PF11736 Protein of unknown function (DUF3299) 24 206 1.3E-31 T 12-10-2018 IPR021727 Protein of unknown function DUF3299 Vc3S01_A1143 c64fee35b3841adf037a2426107276e1 210 Gene3D G3DSA:2.40.50.870 60 210 3.6E-34 T 12-10-2018 Vc3S01_0017 5ec9e0be192cd17b37cba07ffd997d4f 557 Pfam PF06048 Domain of unknown function (DUF927) 21 277 1.1E-63 T 12-10-2018 IPR009270 Domain of unknown function DUF927 Vc3S01_1351 dde1b6b5da2d40b0b827ef12deae18c6 108 Gene3D G3DSA:3.10.490.10 1 107 5.0E-21 T 12-10-2018 Vc3S01_1351 dde1b6b5da2d40b0b827ef12deae18c6 108 Pfam PF13772 AIG2-like family 5 85 1.4E-15 T 12-10-2018 Vc3S01_1351 dde1b6b5da2d40b0b827ef12deae18c6 108 SUPERFAMILY SSF110857 3 71 6.8E-10 T 12-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily Vc3S01_2935 abc0a95d3b1f5f1fd7223b93a4e566e9 136 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 133 37.508 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_2935 abc0a95d3b1f5f1fd7223b93a4e566e9 136 Gene3D G3DSA:3.90.1170.10 1 136 4.7E-54 T 12-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 Vc3S01_2935 abc0a95d3b1f5f1fd7223b93a4e566e9 136 PRINTS PR00060 Ribosomal protein L16 signature 23 35 3.4E-40 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_2935 abc0a95d3b1f5f1fd7223b93a4e566e9 136 PRINTS PR00060 Ribosomal protein L16 signature 87 116 3.4E-40 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_2935 abc0a95d3b1f5f1fd7223b93a4e566e9 136 PRINTS PR00060 Ribosomal protein L16 signature 41 52 3.4E-40 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_2935 abc0a95d3b1f5f1fd7223b93a4e566e9 136 PRINTS PR00060 Ribosomal protein L16 signature 57 86 3.4E-40 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_2935 abc0a95d3b1f5f1fd7223b93a4e566e9 136 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 125 4.7E-57 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_2935 abc0a95d3b1f5f1fd7223b93a4e566e9 136 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 8.8E-47 T 12-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 Vc3S01_2935 abc0a95d3b1f5f1fd7223b93a4e566e9 136 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 58 69 - T 12-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Vc3S01_2935 abc0a95d3b1f5f1fd7223b93a4e566e9 136 SUPERFAMILY SSF54686 3 133 4.19E-53 T 12-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 Vc3S01_2352 ae58f2c1ea7b2ef85d9d0b85c7afa2eb 672 TIGRFAM TIGR04096 dnd_rel_methyl: DNA phosphorothioation-associated putative methyltransferase 182 670 1.4E-189 T 12-10-2018 IPR024019 Conserved hypothetical protein CHP04096 Vc3S01_A0951 2df1d057078b12cd526b20281a24931e 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 129 299 1.3E-21 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Vc3S01_A0951 2df1d057078b12cd526b20281a24931e 321 SUPERFAMILY SSF161098 105 302 9.55E-25 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_A0951 2df1d057078b12cd526b20281a24931e 321 Gene3D G3DSA:1.10.3720.10 104 307 2.2E-22 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_2597 7507618557c5fc3ce5d67d0c5da07540 554 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 551 1.1E-172 T 12-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 Vc3S01_2597 7507618557c5fc3ce5d67d0c5da07540 554 Gene3D G3DSA:3.40.50.300 296 553 8.1E-46 T 12-10-2018 Vc3S01_2597 7507618557c5fc3ce5d67d0c5da07540 554 Gene3D G3DSA:3.40.50.300 1 293 4.3E-46 T 12-10-2018 Vc3S01_2597 7507618557c5fc3ce5d67d0c5da07540 554 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 507 4.2E-17 T 12-10-2018 IPR003395 RecF/RecN/SMC, N-terminal Vc3S01_2597 7507618557c5fc3ce5d67d0c5da07540 554 SUPERFAMILY SSF52540 1 515 3.96E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2597 7507618557c5fc3ce5d67d0c5da07540 554 PIRSF PIRSF003128 1 554 3.3E-162 T 12-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 Vc3S01_2463 8c4ecccb47c80858ed7e8ee2fa0f62c8 396 Gene3D G3DSA:1.20.1330.10 42 225 1.1E-30 T 12-10-2018 Vc3S01_2463 8c4ecccb47c80858ed7e8ee2fa0f62c8 396 Gene3D G3DSA:1.20.1330.10 265 371 1.6E-9 T 12-10-2018 Vc3S01_2463 8c4ecccb47c80858ed7e8ee2fa0f62c8 396 SUPERFAMILY SSF64518 1 396 9.42E-65 T 12-10-2018 Vc3S01_2463 8c4ecccb47c80858ed7e8ee2fa0f62c8 396 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 4 396 5.6E-91 T 12-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 Vc3S01_2463 8c4ecccb47c80858ed7e8ee2fa0f62c8 396 Pfam PF00700 Bacterial flagellin C-terminal helical region 318 396 1.2E-4 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Vc3S01_2463 8c4ecccb47c80858ed7e8ee2fa0f62c8 396 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 142 3.6E-10 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Vc3S01_A0448 a298342a592483611a4e0f3537434b3e 308 Pfam PF01476 LysM domain 48 91 2.8E-8 T 12-10-2018 IPR018392 LysM domain Vc3S01_A0448 a298342a592483611a4e0f3537434b3e 308 SUPERFAMILY SSF141523 100 238 1.05E-29 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Vc3S01_A0448 a298342a592483611a4e0f3537434b3e 308 Gene3D G3DSA:2.40.440.10 27 306 4.7E-86 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Vc3S01_A0448 a298342a592483611a4e0f3537434b3e 308 SUPERFAMILY SSF54106 47 91 2.88E-7 T 12-10-2018 Vc3S01_A0448 a298342a592483611a4e0f3537434b3e 308 Pfam PF03734 L,D-transpeptidase catalytic domain 103 238 3.2E-22 T 12-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 Vc3S01_A0448 a298342a592483611a4e0f3537434b3e 308 SMART SM00257 47 91 5.0E-5 T 12-10-2018 IPR018392 LysM domain Vc3S01_1664 a2e81cde06f9b77e6a5a4a07a6077cbf 297 SUPERFAMILY SSF52402 15 233 2.3E-53 T 12-10-2018 Vc3S01_1664 a2e81cde06f9b77e6a5a4a07a6077cbf 297 Pfam PF01171 PP-loop family 41 203 5.4E-16 T 12-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 Vc3S01_1664 a2e81cde06f9b77e6a5a4a07a6077cbf 297 PIRSF PIRSF004976 3 284 5.4E-70 T 12-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 Vc3S01_1664 a2e81cde06f9b77e6a5a4a07a6077cbf 297 Gene3D G3DSA:3.40.50.620 2 268 2.0E-48 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Vc3S01_1664 a2e81cde06f9b77e6a5a4a07a6077cbf 297 Hamap MF_01850 tRNA-cytidine(32) 2-sulfurtransferase [ttcA]. 8 269 56.338 T 12-10-2018 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase GO:0008033 Vc3S01_A1563 f4a735aea4fc48daefdc0fee2069569c 468 SMART SM01235 15 157 8.1E-51 T 12-10-2018 IPR025992 Haem-binding domain Vc3S01_A1563 f4a735aea4fc48daefdc0fee2069569c 468 Gene3D G3DSA:1.10.760.10 184 461 1.1E-105 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Vc3S01_A1563 f4a735aea4fc48daefdc0fee2069569c 468 Pfam PF00034 Cytochrome c 346 458 1.6E-4 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A1563 f4a735aea4fc48daefdc0fee2069569c 468 SUPERFAMILY SSF46626 321 461 1.18E-37 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Vc3S01_A1563 f4a735aea4fc48daefdc0fee2069569c 468 SUPERFAMILY SSF46626 175 322 3.63E-47 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Vc3S01_A1563 f4a735aea4fc48daefdc0fee2069569c 468 Gene3D G3DSA:1.10.760.10 187 334 1.1E-105 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Vc3S01_A1563 f4a735aea4fc48daefdc0fee2069569c 468 Pfam PF03150 Di-haem cytochrome c peroxidase 187 334 6.9E-49 T 12-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 Vc3S01_A1563 f4a735aea4fc48daefdc0fee2069569c 468 Pfam PF14376 Haem-binding domain 18 154 4.4E-31 T 12-10-2018 IPR025992 Haem-binding domain Vc3S01_0057 68e6b7d15b53ac45b015946f6c688535 255 Pfam PF05690 Thiazole biosynthesis protein ThiG 3 247 8.7E-110 T 12-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 Vc3S01_0057 68e6b7d15b53ac45b015946f6c688535 255 Hamap MF_00443 Thiazole synthase [thiG]. 1 253 43.15 T 12-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 Vc3S01_0057 68e6b7d15b53ac45b015946f6c688535 255 SUPERFAMILY SSF110399 1 236 6.41E-85 T 12-10-2018 Vc3S01_0057 68e6b7d15b53ac45b015946f6c688535 255 Gene3D G3DSA:3.20.20.70 1 253 4.8E-111 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_0113 2c2905f45b980ec2fdae1bd481ebee5a 109 Gene3D G3DSA:2.40.50.660 32 108 7.3E-8 T 12-10-2018 Vc3S01_0113 2c2905f45b980ec2fdae1bd481ebee5a 109 Pfam PF10694 Protein of unknown function (DUF2500) 2 105 2.1E-23 T 12-10-2018 IPR019635 Protein of unknown function DUF2500 Vc3S01_A1493 110ba06769ff6811508a69643cdd9a63 204 Gene3D G3DSA:3.90.850.10 7 201 8.3E-46 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 Vc3S01_A1493 110ba06769ff6811508a69643cdd9a63 204 SUPERFAMILY SSF56529 11 187 3.92E-46 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 Vc3S01_A1493 110ba06769ff6811508a69643cdd9a63 204 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 15 186 1.7E-26 T 12-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 Vc3S01_A0135 9cea211181f4f00ad691c3257bf6eb17 194 Pfam PF01810 LysE type translocator 17 188 1.3E-15 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Vc3S01_A1381 36fbeef494414afaae7b1756ee6bbe45 501 ProSitePatterns PS00211 ABC transporters family signature. 396 410 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_A1381 36fbeef494414afaae7b1756ee6bbe45 501 SMART SM00382 278 472 4.1E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_A1381 36fbeef494414afaae7b1756ee6bbe45 501 SMART SM00382 30 219 5.1E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_A1381 36fbeef494414afaae7b1756ee6bbe45 501 SUPERFAMILY SSF52540 5 229 1.03E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A1381 36fbeef494414afaae7b1756ee6bbe45 501 SUPERFAMILY SSF52540 269 480 5.54E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A1381 36fbeef494414afaae7b1756ee6bbe45 501 Gene3D G3DSA:3.40.50.300 266 495 2.9E-46 T 12-10-2018 Vc3S01_A1381 36fbeef494414afaae7b1756ee6bbe45 501 Pfam PF00005 ABC transporter 21 170 1.3E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_A1381 36fbeef494414afaae7b1756ee6bbe45 501 Pfam PF00005 ABC transporter 270 423 9.9E-25 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_A1381 36fbeef494414afaae7b1756ee6bbe45 501 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_A1381 36fbeef494414afaae7b1756ee6bbe45 501 Gene3D G3DSA:3.40.50.300 1 240 1.6E-57 T 12-10-2018 Vc3S01_2554 2132e7b90554957d31082ace78fa53f0 207 Pfam PF01738 Dienelactone hydrolase family 80 188 1.0E-5 T 12-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 Vc3S01_2554 2132e7b90554957d31082ace78fa53f0 207 SUPERFAMILY SSF53474 3 177 9.34E-28 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_2554 2132e7b90554957d31082ace78fa53f0 207 Gene3D G3DSA:3.40.50.1820 13 190 1.2E-29 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_1884 62bf67f00f6143b6465fd7da4a583ae4 129 Gene3D G3DSA:3.10.180.10 7 127 4.3E-37 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Vc3S01_1884 62bf67f00f6143b6465fd7da4a583ae4 129 SUPERFAMILY SSF54593 3 122 6.44E-25 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Vc3S01_1884 62bf67f00f6143b6465fd7da4a583ae4 129 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 122 1.6E-10 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Vc3S01_2392 08d4e04cafc2884c46fb847d4cbfa280 262 SUPERFAMILY SSF52540 4 216 1.87E-51 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2392 08d4e04cafc2884c46fb847d4cbfa280 262 Pfam PF00005 ABC transporter 20 148 3.0E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_2392 08d4e04cafc2884c46fb847d4cbfa280 262 Gene3D G3DSA:3.40.50.300 1 239 3.5E-55 T 12-10-2018 Vc3S01_2392 08d4e04cafc2884c46fb847d4cbfa280 262 SMART SM00382 29 199 1.5E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_0065 d63425c9c90a2e73379d2c66b995526a 308 Hamap MF_00697 UPF0276 protein . 28 300 44.608 T 12-10-2018 IPR007801 Uncharacterised protein family UPF0276 Vc3S01_0065 d63425c9c90a2e73379d2c66b995526a 308 Pfam PF05114 Protein of unknown function (DUF692) 28 291 4.4E-108 T 12-10-2018 IPR007801 Uncharacterised protein family UPF0276 Vc3S01_0065 d63425c9c90a2e73379d2c66b995526a 308 Gene3D G3DSA:3.20.20.150 24 300 2.2E-88 T 12-10-2018 Vc3S01_0065 d63425c9c90a2e73379d2c66b995526a 308 SUPERFAMILY SSF51658 48 275 2.63E-13 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily Vc3S01_A1540 30404bfbfb9e531460fa7dfd222c1caf 543 Gene3D G3DSA:1.10.287.950 210 543 1.9E-78 T 12-10-2018 Vc3S01_A1540 30404bfbfb9e531460fa7dfd222c1caf 543 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 324 508 4.5E-41 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Vc3S01_A1540 30404bfbfb9e531460fa7dfd222c1caf 543 SMART SM00304 211 265 2.9E-4 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Vc3S01_A1540 30404bfbfb9e531460fa7dfd222c1caf 543 SMART SM00283 280 541 3.9E-78 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Vc3S01_A1540 30404bfbfb9e531460fa7dfd222c1caf 543 Pfam PF12729 Four helix bundle sensory module for signal transduction 5 171 2.4E-22 T 12-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain Vc3S01_A1540 30404bfbfb9e531460fa7dfd222c1caf 543 SUPERFAMILY SSF58104 231 542 5.62E-76 T 12-10-2018 Vc3S01_2913 501015ffebaf3afe96a895e3c3e89499 198 Pfam PF08525 Opacity-associated protein A N-terminal motif 45 71 1.2E-10 T 12-10-2018 IPR013731 Opacity-associated protein A, N-terminal Vc3S01_2913 501015ffebaf3afe96a895e3c3e89499 198 Pfam PF04225 Opacity-associated protein A LysM-like domain 114 198 1.0E-38 T 12-10-2018 IPR007340 Opacity-associated protein A Vc3S01_2913 501015ffebaf3afe96a895e3c3e89499 198 Gene3D G3DSA:3.10.450.350 102 192 2.0E-14 T 12-10-2018 Vc3S01_A1700 03085b7a605cc6cea1449011c32e9a5b 416 Pfam PF13629 Pilus formation protein N terminal region 37 101 3.3E-11 T 12-10-2018 IPR032789 Pilus formation protein, N-terminal Vc3S01_A1700 03085b7a605cc6cea1449011c32e9a5b 416 PRINTS PR00811 Bacterial general secretion pathway protein D signature 358 372 1.3E-7 T 12-10-2018 IPR001775 GspD/PilQ family Vc3S01_A1700 03085b7a605cc6cea1449011c32e9a5b 416 PRINTS PR00811 Bacterial general secretion pathway protein D signature 335 353 1.3E-7 T 12-10-2018 IPR001775 GspD/PilQ family Vc3S01_A1700 03085b7a605cc6cea1449011c32e9a5b 416 PRINTS PR00811 Bacterial general secretion pathway protein D signature 170 180 1.3E-7 T 12-10-2018 IPR001775 GspD/PilQ family Vc3S01_A1700 03085b7a605cc6cea1449011c32e9a5b 416 Pfam PF00263 Bacterial type II and III secretion system protein 214 367 2.1E-39 T 12-10-2018 IPR004846 Type II/III secretion system GO:0009306 Vc3S01_A1726 95fd7389d1834047deed3880c908b62c 68 Pfam PF04400 (Na+)-NQR maturation NqrM 21 63 2.7E-19 T 12-10-2018 IPR007495 (Na+)-NQR maturation factor NqrM Vc3S01_2676 5f41194dd7c258396809b8bd0bc3d095 279 Gene3D G3DSA:3.30.1380.10 19 279 1.1E-96 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Vc3S01_2676 5f41194dd7c258396809b8bd0bc3d095 279 Pfam PF03411 Penicillin-insensitive murein endopeptidase 35 276 1.7E-94 T 12-10-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 Vc3S01_2676 5f41194dd7c258396809b8bd0bc3d095 279 SUPERFAMILY SSF55166 21 277 1.96E-93 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Vc3S01_2676 5f41194dd7c258396809b8bd0bc3d095 279 PIRSF PIRSF018455 2 279 1.5E-111 T 12-10-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 Vc3S01_A1747 2a6842e7d30c0f275612073a95e17c06 170 ProSitePatterns PS00087 Copper/Zinc superoxide dismutase signature 1. 62 72 - T 12-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 Vc3S01_A1747 2a6842e7d30c0f275612073a95e17c06 170 Gene3D G3DSA:2.60.40.200 20 170 2.3E-46 T 12-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 Vc3S01_A1747 2a6842e7d30c0f275612073a95e17c06 170 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 32 169 1.8E-30 T 12-10-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 Vc3S01_A1747 2a6842e7d30c0f275612073a95e17c06 170 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 158 169 - T 12-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 Vc3S01_A1747 2a6842e7d30c0f275612073a95e17c06 170 SUPERFAMILY SSF49329 25 170 3.01E-49 T 12-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 Vc3S01_2977 e17f1c360ae58e51328107471e76205f 422 SUPERFAMILY SSF56059 110 284 4.12E-24 T 12-10-2018 Vc3S01_2977 e17f1c360ae58e51328107471e76205f 422 Pfam PF02655 ATP-grasp domain 107 257 1.2E-12 T 12-10-2018 IPR003806 ATP-grasp fold, DUF201-type GO:0005524|GO:0046872 Vc3S01_2977 e17f1c360ae58e51328107471e76205f 422 Gene3D G3DSA:3.30.470.20 173 270 5.0E-25 T 12-10-2018 Vc3S01_2977 e17f1c360ae58e51328107471e76205f 422 Gene3D G3DSA:3.40.50.20 44 99 5.0E-25 T 12-10-2018 Vc3S01_2977 e17f1c360ae58e51328107471e76205f 422 Gene3D G3DSA:3.30.1490.20 100 172 5.0E-25 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Vc3S01_A1572 9ad61725077df174e47981cd9f9d06c3 718 SUPERFAMILY SSF53474 453 697 6.66E-50 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_A1572 9ad61725077df174e47981cd9f9d06c3 718 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 42 442 9.5E-129 T 12-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 Vc3S01_A1572 9ad61725077df174e47981cd9f9d06c3 718 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 538 557 4.6E-60 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Vc3S01_A1572 9ad61725077df174e47981cd9f9d06c3 718 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 643 665 4.6E-60 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Vc3S01_A1572 9ad61725077df174e47981cd9f9d06c3 718 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 510 534 4.6E-60 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Vc3S01_A1572 9ad61725077df174e47981cd9f9d06c3 718 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 624 639 4.6E-60 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Vc3S01_A1572 9ad61725077df174e47981cd9f9d06c3 718 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 484 502 4.6E-60 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Vc3S01_A1572 9ad61725077df174e47981cd9f9d06c3 718 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 568 588 4.6E-60 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Vc3S01_A1572 9ad61725077df174e47981cd9f9d06c3 718 Gene3D G3DSA:3.40.50.1820 51 683 1.5E-256 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_A1572 9ad61725077df174e47981cd9f9d06c3 718 Pfam PF00326 Prolyl oligopeptidase family 499 714 5.6E-71 T 12-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 Vc3S01_A1572 9ad61725077df174e47981cd9f9d06c3 718 Gene3D G3DSA:2.130.10.120 108 444 1.5E-256 T 12-10-2018 Vc3S01_A1572 9ad61725077df174e47981cd9f9d06c3 718 SUPERFAMILY SSF50993 37 448 4.18E-100 T 12-10-2018 Vc3S01_0004 6e76473cdb7c55cea153d3440d772dc8 77 SUPERFAMILY SSF47413 9 45 1.39E-7 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Vc3S01_0004 6e76473cdb7c55cea153d3440d772dc8 77 Gene3D G3DSA:1.10.260.40 1 74 2.8E-13 T 12-10-2018 Vc3S01_A1094 c76bd461874a2bec212da365bdc832a7 227 SUPERFAMILY SSF160467 8 97 2.75E-10 T 12-10-2018 Vc3S01_A1094 c76bd461874a2bec212da365bdc832a7 227 Gene3D G3DSA:3.30.1360.40 6 82 9.3E-10 T 12-10-2018 Vc3S01_A1094 c76bd461874a2bec212da365bdc832a7 227 Gene3D G3DSA:2.40.100.10 91 226 2.0E-46 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily Vc3S01_A1094 c76bd461874a2bec212da365bdc832a7 227 SUPERFAMILY SSF50891 93 220 5.31E-35 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily Vc3S01_A1094 c76bd461874a2bec212da365bdc832a7 227 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 7 197 4.0E-54 T 12-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D Vc3S01_A1094 c76bd461874a2bec212da365bdc832a7 227 SMART SM00796 6 203 5.9E-62 T 12-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D Vc3S01_2404 0a323e3b6da74e507a884370981b02f3 250 Pfam PF08907 Domain of unknown function (DUF1853) 35 207 8.4E-39 T 12-10-2018 IPR015003 Protein of unknown function DUF1853 Vc3S01_2204 65a83b644086866649af22a488aaef0a 501 Pfam PF14400 Inactive transglutaminase fused to 7 transmembrane helices 24 183 1.9E-59 T 12-10-2018 IPR025838 Inactive transglutaminase fused to 7 transmembrane helices Vc3S01_2204 65a83b644086866649af22a488aaef0a 501 Pfam PF14402 7 transmembrane helices usually fused to an inactive transglutaminase 255 498 1.8E-108 T 12-10-2018 IPR025840 7 transmembrane helices usually fused to an inactive transglutaminase Vc3S01_2439 e853244626b99dc083a539dd3bdaf1cb 369 Gene3D G3DSA:1.50.10.10 20 363 5.7E-116 T 12-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 Vc3S01_2439 e853244626b99dc083a539dd3bdaf1cb 369 PRINTS PR00735 Glycosyl hydrolase family 8 signature 111 129 1.0E-14 T 12-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 Vc3S01_2439 e853244626b99dc083a539dd3bdaf1cb 369 PRINTS PR00735 Glycosyl hydrolase family 8 signature 214 225 1.0E-14 T 12-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 Vc3S01_2439 e853244626b99dc083a539dd3bdaf1cb 369 PRINTS PR00735 Glycosyl hydrolase family 8 signature 334 348 1.0E-14 T 12-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 Vc3S01_2439 e853244626b99dc083a539dd3bdaf1cb 369 PRINTS PR00735 Glycosyl hydrolase family 8 signature 49 62 1.0E-14 T 12-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 Vc3S01_2439 e853244626b99dc083a539dd3bdaf1cb 369 PRINTS PR00735 Glycosyl hydrolase family 8 signature 238 247 1.0E-14 T 12-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 Vc3S01_2439 e853244626b99dc083a539dd3bdaf1cb 369 Pfam PF01270 Glycosyl hydrolases family 8 19 348 3.9E-63 T 12-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 Vc3S01_2439 e853244626b99dc083a539dd3bdaf1cb 369 SUPERFAMILY SSF48208 3 353 8.84E-95 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Vc3S01_2153 66e53d2679eac645c849fce899c23eef 152 Gene3D G3DSA:3.30.1460.10 1 131 3.6E-22 T 12-10-2018 Vc3S01_2153 66e53d2679eac645c849fce899c23eef 152 Pfam PF05932 Tir chaperone protein (CesT) family 7 126 1.9E-24 T 12-10-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 Vc3S01_2153 66e53d2679eac645c849fce899c23eef 152 SUPERFAMILY SSF69635 1 146 1.29E-36 T 12-10-2018 Vc3S01_A0701 7e350fd7315be4cb4bfb2f32939d8ab7 114 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 5 101 1.4E-16 T 12-10-2018 IPR019289 Bacteriophage tail protein Gp41, putative Vc3S01_0092 a2e8edd52bb9cca3d344a1042658dde6 104 Pfam PF01491 Frataxin-like domain 1 100 2.6E-30 T 12-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Vc3S01_0092 a2e8edd52bb9cca3d344a1042658dde6 104 SMART SM01219 1 104 7.3E-55 T 12-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Vc3S01_0092 a2e8edd52bb9cca3d344a1042658dde6 104 SUPERFAMILY SSF55387 1 103 6.45E-39 T 12-10-2018 Vc3S01_0092 a2e8edd52bb9cca3d344a1042658dde6 104 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 2 103 5.5E-43 T 12-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Vc3S01_0092 a2e8edd52bb9cca3d344a1042658dde6 104 ProSitePatterns PS01344 Frataxin family signature. 48 62 - T 12-10-2018 IPR020895 Frataxin conserved site Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Vc3S01_0092 a2e8edd52bb9cca3d344a1042658dde6 104 Hamap MF_00142 Iron-sulfur cluster assembly protein CyaY [cyaY]. 1 103 27.364 T 12-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Vc3S01_0092 a2e8edd52bb9cca3d344a1042658dde6 104 Gene3D G3DSA:3.30.920.10 1 104 1.9E-38 T 12-10-2018 IPR036524 Frataxin/CyaY superfamily GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Vc3S01_A0308 cec8c21d16ca8b1facf1959d6db9f9a6 456 Pfam PF03315 Serine dehydratase beta chain 3 152 8.7E-53 T 12-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 Vc3S01_A0308 cec8c21d16ca8b1facf1959d6db9f9a6 456 SUPERFAMILY SSF143548 16 154 9.15E-44 T 12-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 Vc3S01_A0308 cec8c21d16ca8b1facf1959d6db9f9a6 456 Gene3D G3DSA:3.30.1330.90 10 157 4.7E-50 T 12-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 Vc3S01_A0308 cec8c21d16ca8b1facf1959d6db9f9a6 456 Pfam PF03313 Serine dehydratase alpha chain 184 447 1.7E-95 T 12-10-2018 IPR005130 Serine dehydratase-like, alpha subunit Vc3S01_A0308 cec8c21d16ca8b1facf1959d6db9f9a6 456 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 3 448 2.6E-200 T 12-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 Vc3S01_1204 13d18c6dd1188f7144bf1af801651be2 41 ProDom PD926058 BIOSYNTHESIS PEPTIDE LEADER AROMATIC VC1176 VV1222 OPERON ACID AMINO AMINO-ACID 1 41 6.0E-6 T 12-10-2018 IPR012639 Tryptophan operon leader peptide Vc3S01_1204 13d18c6dd1188f7144bf1af801651be2 41 Pfam PF08056 Tryptophan operon leader peptide 1 41 2.5E-29 T 12-10-2018 IPR012639 Tryptophan operon leader peptide Vc3S01_2808 163868cccd2b38f90bf341c7bfef04c4 445 SUPERFAMILY SSF56954 1 433 2.62E-90 T 12-10-2018 Vc3S01_2808 163868cccd2b38f90bf341c7bfef04c4 445 Gene3D G3DSA:1.20.1600.10 23 445 1.4E-117 T 12-10-2018 Vc3S01_2808 163868cccd2b38f90bf341c7bfef04c4 445 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 23 440 1.3E-106 T 12-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 Vc3S01_2808 163868cccd2b38f90bf341c7bfef04c4 445 Pfam PF02321 Outer membrane efflux protein 25 219 2.6E-26 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Vc3S01_2808 163868cccd2b38f90bf341c7bfef04c4 445 Pfam PF02321 Outer membrane efflux protein 243 427 4.7E-32 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Vc3S01_0296 12e1f1cae14385b3c573d98feab17247 62 Gene3D G3DSA:1.10.10.1100 1 55 2.5E-18 T 12-10-2018 Vc3S01_0296 12e1f1cae14385b3c573d98feab17247 62 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 52 2.8E-13 T 12-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain Vc3S01_3122 dcddc79af6798be53b7b9ad9cf16cdfc 681 SUPERFAMILY SSF56349 315 505 6.18E-6 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Vc3S01_A0886 6a763818c0d0b8b514003fd650b3dde8 199 Pfam PF00510 Cytochrome c oxidase subunit III 21 197 3.4E-18 T 12-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A0886 6a763818c0d0b8b514003fd650b3dde8 199 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 20 199 9.4E-84 T 12-10-2018 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 Vc3S01_A0886 6a763818c0d0b8b514003fd650b3dde8 199 Gene3D G3DSA:1.20.120.80 14 199 4.0E-57 T 12-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A0886 6a763818c0d0b8b514003fd650b3dde8 199 SUPERFAMILY SSF81452 7 197 1.16E-57 T 12-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_0424 f8b3b82e1b1cb2a8cadc1d4e110d9265 165 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 4 152 5.5E-55 T 12-10-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 Vc3S01_0424 f8b3b82e1b1cb2a8cadc1d4e110d9265 165 Pfam PF02470 MlaD protein 40 118 3.7E-20 T 12-10-2018 IPR003399 Mce/MlaD Vc3S01_A0441 4659de412dfcffa7a6fed63bfc5031fc 527 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 366 524 1.2E-33 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A0441 4659de412dfcffa7a6fed63bfc5031fc 527 SMART SM00267 358 526 3.7E-30 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_A0441 4659de412dfcffa7a6fed63bfc5031fc 527 SUPERFAMILY SSF55073 374 524 4.32E-36 T 12-10-2018 IPR029787 Nucleotide cyclase Vc3S01_A0441 4659de412dfcffa7a6fed63bfc5031fc 527 Gene3D G3DSA:1.25.40.10 31 313 9.1E-14 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_A0441 4659de412dfcffa7a6fed63bfc5031fc 527 Gene3D G3DSA:3.30.70.270 355 526 7.4E-43 T 12-10-2018 Vc3S01_A0441 4659de412dfcffa7a6fed63bfc5031fc 527 SUPERFAMILY SSF48452 36 227 2.78E-12 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_A0441 4659de412dfcffa7a6fed63bfc5031fc 527 Pfam PF00990 Diguanylate cyclase, GGDEF domain 370 522 6.3E-33 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_1398 1b79d3865e6ebcf5398ac10611638e66 76 Pfam PF09016 Pas factor saposin fold 1 76 1.9E-42 T 12-10-2018 IPR015106 Pas factor saposin domain Vc3S01_1398 1b79d3865e6ebcf5398ac10611638e66 76 Gene3D G3DSA:1.20.1280.100 1 73 3.0E-41 T 12-10-2018 Vc3S01_2192 a77b3f601dae172724478afaf8167d5d 65 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 1 62 5.4E-24 T 12-10-2018 IPR011846 Cyd operon protein YbgE Vc3S01_2192 a77b3f601dae172724478afaf8167d5d 65 TIGRFAM TIGR02112 cyd_oper_ybgE: cyd operon protein YbgE 1 65 2.4E-27 T 12-10-2018 IPR011846 Cyd operon protein YbgE Vc3S01_1793 250c3e4862faa78d834d723c2801a105 399 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 4 398 21.803 T 12-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 Vc3S01_1793 250c3e4862faa78d834d723c2801a105 399 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 11 397 1.1E-120 T 12-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 Vc3S01_1793 250c3e4862faa78d834d723c2801a105 399 Pfam PF03616 Sodium/glutamate symporter 5 367 1.8E-107 T 12-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 Vc3S01_1654 5fb06d6ac200edf0ab8311b063c4a01e 206 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 9 188 1.6E-81 T 12-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO Vc3S01_1654 5fb06d6ac200edf0ab8311b063c4a01e 206 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 9 186 8.6E-82 T 12-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO Vc3S01_1654 5fb06d6ac200edf0ab8311b063c4a01e 206 SUPERFAMILY SSF46626 21 202 1.81E-27 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Vc3S01_1654 5fb06d6ac200edf0ab8311b063c4a01e 206 Gene3D G3DSA:1.10.760.10 46 206 7.7E-72 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Vc3S01_2340 cb1e27d15b5caedb96d7754cfd7c705a 246 PRINTS PR01399 Enterobactin synthetase component D signature 61 81 1.5E-8 T 12-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 Vc3S01_2340 cb1e27d15b5caedb96d7754cfd7c705a 246 PRINTS PR01399 Enterobactin synthetase component D signature 168 184 1.5E-8 T 12-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 Vc3S01_2340 cb1e27d15b5caedb96d7754cfd7c705a 246 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 130 216 2.0E-10 T 12-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Vc3S01_2340 cb1e27d15b5caedb96d7754cfd7c705a 246 SUPERFAMILY SSF56214 129 244 5.36E-13 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Vc3S01_2340 cb1e27d15b5caedb96d7754cfd7c705a 246 Gene3D G3DSA:3.90.470.20 39 146 5.6E-7 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Vc3S01_A1821 a04aafc0e4e7989ef6db560139e91388 278 Pfam PF04338 Protein of unknown function, DUF481 127 266 2.4E-4 T 12-10-2018 IPR007433 Protein of unknown function DUF481 Vc3S01_A1821 a04aafc0e4e7989ef6db560139e91388 278 SUPERFAMILY SSF103515 115 251 7.85E-6 T 12-10-2018 IPR036709 Autotransporter beta-domain superfamily Vc3S01_0274 19718ec6213ed189bffd6b6f26aff790 289 Gene3D G3DSA:3.40.50.300 1 289 4.8E-111 T 12-10-2018 Vc3S01_0274 19718ec6213ed189bffd6b6f26aff790 289 SUPERFAMILY SSF52540 4 286 5.63E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0274 19718ec6213ed189bffd6b6f26aff790 289 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 214 3.3E-70 T 12-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 Vc3S01_0274 19718ec6213ed189bffd6b6f26aff790 289 PRINTS PR00478 Phosphoribulokinase family signature 164 181 1.2E-27 T 12-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 Vc3S01_0274 19718ec6213ed189bffd6b6f26aff790 289 PRINTS PR00478 Phosphoribulokinase family signature 12 29 1.2E-27 T 12-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 Vc3S01_0274 19718ec6213ed189bffd6b6f26aff790 289 PRINTS PR00478 Phosphoribulokinase family signature 126 144 1.2E-27 T 12-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 Vc3S01_0274 19718ec6213ed189bffd6b6f26aff790 289 PRINTS PR00478 Phosphoribulokinase family signature 182 205 1.2E-27 T 12-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 Vc3S01_1448 bda6f0090d791265e60b56f5cc159a4b 415 SUPERFAMILY SSF53850 19 413 4.4E-51 T 12-10-2018 Vc3S01_1448 bda6f0090d791265e60b56f5cc159a4b 415 Pfam PF01547 Bacterial extracellular solute-binding protein 40 328 5.0E-28 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein Vc3S01_1448 bda6f0090d791265e60b56f5cc159a4b 415 Gene3D G3DSA:3.40.190.10 19 415 4.4E-54 T 12-10-2018 Vc3S01_3069 0f9d5be0d8ebaa87e9d144aa609e4312 314 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 10 296 23.88 T 12-10-2018 IPR023679 Uncharacterised protein family UPF0761, bacterial Vc3S01_3069 0f9d5be0d8ebaa87e9d144aa609e4312 314 Pfam PF03631 Virulence factor BrkB 33 280 1.5E-59 T 12-10-2018 IPR017039 Virulence factor BrkB Vc3S01_3069 0f9d5be0d8ebaa87e9d144aa609e4312 314 PIRSF PIRSF035875 9 294 1.6E-54 T 12-10-2018 IPR017039 Virulence factor BrkB Vc3S01_3069 0f9d5be0d8ebaa87e9d144aa609e4312 314 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 21 279 3.5E-83 T 12-10-2018 IPR017039 Virulence factor BrkB Vc3S01_A1639 8926c0000520b167641ba28cb10550dc 144 Pfam PF14352 Domain of unknown function (DUF4402) 58 143 3.8E-10 T 12-10-2018 IPR025514 Protein of unknown function DUF4402 Vc3S01_A0264 ea30b17e856bfa4a3c8fc7301211f008 490 Pfam PF01381 Helix-turn-helix 18 51 6.3E-7 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Vc3S01_A0264 ea30b17e856bfa4a3c8fc7301211f008 490 Gene3D G3DSA:1.10.260.40 2 65 4.5E-7 T 12-10-2018 Vc3S01_A0264 ea30b17e856bfa4a3c8fc7301211f008 490 Pfam PF12268 Protein of unknown function (DUF3612) 299 473 7.0E-106 T 12-10-2018 IPR022055 Protein of unknown function DUF3612 Vc3S01_A0264 ea30b17e856bfa4a3c8fc7301211f008 490 SUPERFAMILY SSF47413 18 56 4.22E-7 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Vc3S01_A0264 ea30b17e856bfa4a3c8fc7301211f008 490 Pfam PF06114 IrrE N-terminal-like domain 160 298 4.2E-6 T 12-10-2018 IPR010359 IrrE N-terminal-like domain Vc3S01_A1789 11eb4eefe4728f98d2d76c1948491180 116 Gene3D G3DSA:3.30.1330.40 9 116 3.3E-19 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Vc3S01_A1789 11eb4eefe4728f98d2d76c1948491180 116 Pfam PF01042 Endoribonuclease L-PSP 35 114 4.1E-11 T 12-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 Vc3S01_A1789 11eb4eefe4728f98d2d76c1948491180 116 SUPERFAMILY SSF55298 31 115 4.04E-17 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Vc3S01_0505 54f75c2d1e40b7b1ff8c052370081558 86 SUPERFAMILY SSF109910 3 79 6.67E-26 T 12-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily Vc3S01_0505 54f75c2d1e40b7b1ff8c052370081558 86 Pfam PF03937 Flavinator of succinate dehydrogenase 7 77 2.8E-24 T 12-10-2018 IPR005631 Flavinator of succinate dehydrogenase Vc3S01_0505 54f75c2d1e40b7b1ff8c052370081558 86 Gene3D G3DSA:1.10.150.250 1 86 2.3E-37 T 12-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily Vc3S01_0774 ff82ef6eea5da25f9f87f67c556c4518 345 Pfam PF12069 Protein of unknown function (DUF3549) 3 340 1.5E-134 T 12-10-2018 IPR021936 Protein of unknown function DUF3549 Vc3S01_2648 fcc1f01baf1201bf18ab60a5158a7f05 378 Gene3D G3DSA:3.20.20.105 1 370 9.3E-175 T 12-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Vc3S01_2648 fcc1f01baf1201bf18ab60a5158a7f05 378 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 3 366 57.449 T 12-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Vc3S01_2648 fcc1f01baf1201bf18ab60a5158a7f05 378 Pfam PF01702 Queuine tRNA-ribosyltransferase 128 363 6.7E-97 T 12-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Vc3S01_2648 fcc1f01baf1201bf18ab60a5158a7f05 378 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 5 371 8.4E-187 T 12-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Vc3S01_2648 fcc1f01baf1201bf18ab60a5158a7f05 378 SUPERFAMILY SSF51713 3 366 1.96E-164 T 12-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Vc3S01_2648 fcc1f01baf1201bf18ab60a5158a7f05 378 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 5 371 3.7E-178 T 12-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Vc3S01_A1847 964315dcba87be15232e7441a28e1d8a 198 Gene3D G3DSA:1.10.10.60 1 56 3.2E-20 T 12-10-2018 Vc3S01_A1847 964315dcba87be15232e7441a28e1d8a 198 SUPERFAMILY SSF46689 4 80 1.11E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_A1847 964315dcba87be15232e7441a28e1d8a 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 56 2.2E-15 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Vc3S01_A1847 964315dcba87be15232e7441a28e1d8a 198 SUPERFAMILY SSF48498 79 195 5.34E-8 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Vc3S01_A1847 964315dcba87be15232e7441a28e1d8a 198 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 148 196 1.2E-7 T 12-10-2018 IPR039536 Transcriptional regulator TetR, C-terminal, Proteobacteria type Vc3S01_A1847 964315dcba87be15232e7441a28e1d8a 198 Gene3D G3DSA:1.10.357.10 58 198 1.7E-28 T 12-10-2018 Vc3S01_A1847 964315dcba87be15232e7441a28e1d8a 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 2.7E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Vc3S01_A1847 964315dcba87be15232e7441a28e1d8a 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 2.7E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Vc3S01_A1837 3b99feff7a870743a8c08b29ff167eef 290 Gene3D G3DSA:3.40.1090.10 2 92 7.0E-10 T 12-10-2018 Vc3S01_A1837 3b99feff7a870743a8c08b29ff167eef 290 Pfam PF01734 Patatin-like phospholipase 7 170 1.1E-13 T 12-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 Vc3S01_A1837 3b99feff7a870743a8c08b29ff167eef 290 SUPERFAMILY SSF52151 4 242 5.23E-33 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Vc3S01_2314 459cf823071bce97e64177db214be2e7 404 Gene3D G3DSA:3.90.1150.10 21 398 2.9E-145 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Vc3S01_2314 459cf823071bce97e64177db214be2e7 404 Pfam PF00155 Aminotransferase class I and II 61 391 1.8E-47 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Vc3S01_2314 459cf823071bce97e64177db214be2e7 404 Gene3D G3DSA:3.40.640.10 53 294 2.9E-145 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Vc3S01_2314 459cf823071bce97e64177db214be2e7 404 SUPERFAMILY SSF53383 5 399 2.45E-95 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Vc3S01_0329 5c90092820f7c4c13e0b322c18a6792a 254 Pfam PF04338 Protein of unknown function, DUF481 39 254 7.3E-54 T 12-10-2018 IPR007433 Protein of unknown function DUF481 Vc3S01_0329 5c90092820f7c4c13e0b322c18a6792a 254 SUPERFAMILY SSF56935 36 213 9.77E-6 T 12-10-2018 Vc3S01_2179 2d3705d6d88a5870676f3f846ab88c95 203 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 14 188 8.0E-54 T 12-10-2018 IPR011978 Uncharacterised protein family UPF0149 Vc3S01_2179 2d3705d6d88a5870676f3f846ab88c95 203 SUPERFAMILY SSF101327 15 189 9.02E-33 T 12-10-2018 IPR036255 YgfB-like superfamily Vc3S01_2179 2d3705d6d88a5870676f3f846ab88c95 203 Pfam PF03695 Uncharacterised protein family (UPF0149) 17 189 5.5E-36 T 12-10-2018 IPR011978 Uncharacterised protein family UPF0149 Vc3S01_A1932 3e37dec7de2346489c17f624a5550479 238 SMART SM00345 3 64 1.9E-12 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Vc3S01_A1932 3e37dec7de2346489c17f624a5550479 238 SMART SM00866 82 219 4.0E-5 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 Vc3S01_A1932 3e37dec7de2346489c17f624a5550479 238 Pfam PF07702 UTRA domain 87 209 3.8E-19 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 Vc3S01_A1932 3e37dec7de2346489c17f624a5550479 238 SUPERFAMILY SSF46785 2 65 7.06E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A1932 3e37dec7de2346489c17f624a5550479 238 Gene3D G3DSA:3.40.1410.10 79 225 6.5E-20 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Vc3S01_A1932 3e37dec7de2346489c17f624a5550479 238 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 64 3.7E-14 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Vc3S01_A1932 3e37dec7de2346489c17f624a5550479 238 SUPERFAMILY SSF64288 88 224 2.36E-27 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Vc3S01_A1932 3e37dec7de2346489c17f624a5550479 238 Gene3D G3DSA:1.10.10.10 1 65 5.7E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A1932 3e37dec7de2346489c17f624a5550479 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 38 54 1.3E-10 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Vc3S01_A1932 3e37dec7de2346489c17f624a5550479 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 24 38 1.3E-10 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Vc3S01_p30009 ccabac49ab7eb7bb90a61753c65d6379 213 Pfam PF00486 Transcriptional regulatory protein, C terminal 19 84 3.1E-10 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Vc3S01_p30009 ccabac49ab7eb7bb90a61753c65d6379 213 SMART SM00862 11 84 4.3E-5 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Vc3S01_p30009 ccabac49ab7eb7bb90a61753c65d6379 213 SUPERFAMILY SSF46894 13 84 6.8E-11 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Vc3S01_p30009 ccabac49ab7eb7bb90a61753c65d6379 213 Gene3D G3DSA:1.10.10.10 7 94 2.8E-12 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_2732 449112e9ce00ebbfa21e8007b9ec839b 239 SUPERFAMILY SSF53335 34 190 1.94E-31 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Vc3S01_2732 449112e9ce00ebbfa21e8007b9ec839b 239 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 9 239 54.964 T 12-10-2018 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 Vc3S01_2732 449112e9ce00ebbfa21e8007b9ec839b 239 Pfam PF05175 Methyltransferase small domain 42 130 3.7E-18 T 12-10-2018 IPR007848 Methyltransferase small domain GO:0008168 Vc3S01_2732 449112e9ce00ebbfa21e8007b9ec839b 239 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 114 120 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Vc3S01_2732 449112e9ce00ebbfa21e8007b9ec839b 239 Gene3D G3DSA:3.40.50.150 7 235 1.5E-56 T 12-10-2018 Vc3S01_A1969 c44cc906e43f903487885090f1c2c88e 445 Pfam PF01554 MatE 20 180 3.9E-17 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Vc3S01_A1969 c44cc906e43f903487885090f1c2c88e 445 Pfam PF01554 MatE 258 393 1.1E-15 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Vc3S01_A1969 c44cc906e43f903487885090f1c2c88e 445 PIRSF PIRSF006603 1 441 9.5E-56 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Vc3S01_2761 778d44f59d6f3944edb5af4de4923bd5 274 Gene3D G3DSA:3.40.50.1980 142 270 1.3E-29 T 12-10-2018 Vc3S01_2761 778d44f59d6f3944edb5af4de4923bd5 274 SUPERFAMILY SSF53807 20 266 1.02E-59 T 12-10-2018 Vc3S01_2761 778d44f59d6f3944edb5af4de4923bd5 274 Gene3D G3DSA:3.40.50.1980 21 140 3.1E-35 T 12-10-2018 Vc3S01_2761 778d44f59d6f3944edb5af4de4923bd5 274 Hamap MF_01000 Vitamin B12-binding protein [btuF]. 1 271 50.813 T 12-10-2018 IPR023544 ABC transporter, vitamin B12-binding protein GO:0015889|GO:0031419|GO:0042597 Vc3S01_2761 778d44f59d6f3944edb5af4de4923bd5 274 Pfam PF01497 Periplasmic binding protein 25 246 3.7E-33 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain Vc3S01_0904 68f5f7a789e354e6a64521f6b0019262 177 Pfam PF04315 Elongation factor P hydroxylase 12 173 7.8E-74 T 12-10-2018 IPR007411 Elongation factor P hydroxylase Vc3S01_A0538 eb1c3dd586cb398243897d96b41ed62c 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 286 9.1E-19 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Vc3S01_A0538 eb1c3dd586cb398243897d96b41ed62c 296 SUPERFAMILY SSF161098 10 296 9.16E-69 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_A0538 eb1c3dd586cb398243897d96b41ed62c 296 Gene3D G3DSA:1.10.3720.10 1 283 2.8E-74 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_0275 ca034538b952e4b5281c0ce6364aaf1b 70 Hamap MF_00690 UPF0270 protein YheU [yheU]. 1 70 25.525 T 12-10-2018 IPR010648 Uncharacterised protein family UPF0270 Vc3S01_0275 ca034538b952e4b5281c0ce6364aaf1b 70 Pfam PF06794 Uncharacterised protein family (UPF0270) 1 68 6.3E-34 T 12-10-2018 IPR010648 Uncharacterised protein family UPF0270 Vc3S01_0275 ca034538b952e4b5281c0ce6364aaf1b 70 Gene3D G3DSA:1.10.10.610 1 70 1.8E-29 T 12-10-2018 IPR036685 YehU-like superfamily Vc3S01_0275 ca034538b952e4b5281c0ce6364aaf1b 70 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 64 1.0E-23 T 12-10-2018 IPR010648 Uncharacterised protein family UPF0270 Vc3S01_0275 ca034538b952e4b5281c0ce6364aaf1b 70 PIRSF PIRSF006169 1 70 7.7E-36 T 12-10-2018 IPR010648 Uncharacterised protein family UPF0270 Vc3S01_0275 ca034538b952e4b5281c0ce6364aaf1b 70 SUPERFAMILY SSF118001 1 69 4.97E-28 T 12-10-2018 IPR036685 YehU-like superfamily Vc3S01_p30070 af5d7ebe3335592f5185cd399dfb64a3 195 Pfam PF11140 Protein of unknown function (DUF2913) 8 184 1.2E-20 T 12-10-2018 IPR021316 Protein of unknown function DUF2913 Vc3S01_1221 b24a53e032274b5332ac7e389a31a051 305 Pfam PF13084 Domain of unknown function (DUF3943) 142 251 3.0E-37 T 12-10-2018 IPR025079 Domain of unknown function DUF3943 Vc3S01_3049 9fa0928cdaab2db75f9cdc0f0e9b1199 188 Gene3D G3DSA:3.90.79.10 7 188 7.3E-49 T 12-10-2018 Vc3S01_3049 9fa0928cdaab2db75f9cdc0f0e9b1199 188 Pfam PF00293 NUDIX domain 46 154 2.0E-15 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Vc3S01_3049 9fa0928cdaab2db75f9cdc0f0e9b1199 188 ProSitePatterns PS00893 Nudix box signature. 80 101 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Vc3S01_3049 9fa0928cdaab2db75f9cdc0f0e9b1199 188 SUPERFAMILY SSF55811 4 182 2.98E-40 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Vc3S01_0286 9600d7b3e514e139fb52bf62e846c686 328 Gene3D G3DSA:2.130.10.10 11 114 7.6E-7 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Vc3S01_0286 9600d7b3e514e139fb52bf62e846c686 328 SMART SM00320 151 189 1.6E-5 T 12-10-2018 IPR001680 WD40 repeat GO:0005515 Vc3S01_0286 9600d7b3e514e139fb52bf62e846c686 328 SMART SM00320 285 323 170.0 T 12-10-2018 IPR001680 WD40 repeat GO:0005515 Vc3S01_0286 9600d7b3e514e139fb52bf62e846c686 328 SMART SM00320 23 62 300.0 T 12-10-2018 IPR001680 WD40 repeat GO:0005515 Vc3S01_0286 9600d7b3e514e139fb52bf62e846c686 328 SMART SM00320 192 230 0.38 T 12-10-2018 IPR001680 WD40 repeat GO:0005515 Vc3S01_0286 9600d7b3e514e139fb52bf62e846c686 328 SMART SM00320 68 106 19.0 T 12-10-2018 IPR001680 WD40 repeat GO:0005515 Vc3S01_0286 9600d7b3e514e139fb52bf62e846c686 328 SMART SM00320 233 274 0.079 T 12-10-2018 IPR001680 WD40 repeat GO:0005515 Vc3S01_0286 9600d7b3e514e139fb52bf62e846c686 328 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 176 190 - T 12-10-2018 IPR019775 WD40 repeat, conserved site Vc3S01_0286 9600d7b3e514e139fb52bf62e846c686 328 Pfam PF13360 PQQ-like domain 171 286 1.3E-4 T 12-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat Vc3S01_0286 9600d7b3e514e139fb52bf62e846c686 328 SUPERFAMILY SSF50998 26 328 5.1E-45 T 12-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily Vc3S01_0286 9600d7b3e514e139fb52bf62e846c686 328 Gene3D G3DSA:2.130.10.10 115 328 5.8E-37 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Vc3S01_A1325 3a7b2c89a4d2553082aa5c4d97439f9c 357 Gene3D G3DSA:1.25.40.10 149 306 9.6E-19 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_A1325 3a7b2c89a4d2553082aa5c4d97439f9c 357 SUPERFAMILY SSF48452 178 311 9.49E-18 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_A1325 3a7b2c89a4d2553082aa5c4d97439f9c 357 SMART SM00028 173 206 350.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_A1325 3a7b2c89a4d2553082aa5c4d97439f9c 357 SMART SM00028 241 274 39.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_A1325 3a7b2c89a4d2553082aa5c4d97439f9c 357 SMART SM00028 207 240 0.38 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Vc3S01_A1325 3a7b2c89a4d2553082aa5c4d97439f9c 357 SUPERFAMILY SSF48371 71 141 3.45E-7 T 12-10-2018 IPR016024 Armadillo-type fold Vc3S01_A1325 3a7b2c89a4d2553082aa5c4d97439f9c 357 Pfam PF13432 Tetratricopeptide repeat 178 241 4.3E-7 T 12-10-2018 Vc3S01_A1825 ff311eaa63d66a8ec5ec8ce53156dc97 72 Pfam PF09905 DNA-binding protein VF530 6 68 9.9E-35 T 12-10-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 Vc3S01_A1825 ff311eaa63d66a8ec5ec8ce53156dc97 72 Gene3D G3DSA:1.10.720.30 14 71 3.9E-30 T 12-10-2018 IPR036361 SAP domain superfamily Vc3S01_A1728 7ff1b49367461c0e51a3a3e44ada1601 62 Pfam PF02001 Protein of unknown function DUF134 3 55 5.5E-15 T 12-10-2018 IPR002852 Uncharacterised protein family UPF0251 Vc3S01_A1728 7ff1b49367461c0e51a3a3e44ada1601 62 Gene3D G3DSA:1.10.10.10 1 49 7.8E-8 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A1728 7ff1b49367461c0e51a3a3e44ada1601 62 SUPERFAMILY SSF88659 2 45 3.27E-6 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Vc3S01_0636 fd52bddb5d6387aa96f5c7d43996c9cf 137 SUPERFAMILY SSF46785 13 136 5.1E-24 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_0636 fd52bddb5d6387aa96f5c7d43996c9cf 137 SMART SM00347 23 124 1.4E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Vc3S01_0636 fd52bddb5d6387aa96f5c7d43996c9cf 137 Pfam PF12802 MarR family 30 88 7.0E-14 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Vc3S01_0636 fd52bddb5d6387aa96f5c7d43996c9cf 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 1.7E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Vc3S01_0636 fd52bddb5d6387aa96f5c7d43996c9cf 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 1.7E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Vc3S01_0636 fd52bddb5d6387aa96f5c7d43996c9cf 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 1.7E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Vc3S01_0636 fd52bddb5d6387aa96f5c7d43996c9cf 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 1.7E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Vc3S01_0636 fd52bddb5d6387aa96f5c7d43996c9cf 137 Gene3D G3DSA:1.10.10.10 4 137 2.7E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A0259 f01d16dae7f3247424d8e23efc02887f 272 SUPERFAMILY SSF47413 3 73 6.19E-8 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Vc3S01_A0259 f01d16dae7f3247424d8e23efc02887f 272 Gene3D G3DSA:1.10.260.40 5 104 1.9E-8 T 12-10-2018 Vc3S01_A1811 bdddeecb65fd51eddfe3314947b43fc0 295 PIRSF PIRSF018001 1 295 2.8E-59 T 12-10-2018 IPR016708 Aspartoacylase GO:0016811 Vc3S01_A1811 bdddeecb65fd51eddfe3314947b43fc0 295 Gene3D G3DSA:3.40.630.10 6 289 3.0E-87 T 12-10-2018 Vc3S01_A1811 bdddeecb65fd51eddfe3314947b43fc0 295 Hamap MF_00704 Probable aspartoacylase. 2 294 29.304 T 12-10-2018 IPR016708 Aspartoacylase GO:0016811 Vc3S01_A1811 bdddeecb65fd51eddfe3314947b43fc0 295 Gene3D G3DSA:2.20.25.160 219 266 3.0E-87 T 12-10-2018 Vc3S01_A1811 bdddeecb65fd51eddfe3314947b43fc0 295 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 5 289 2.3E-36 T 12-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 Vc3S01_A1811 bdddeecb65fd51eddfe3314947b43fc0 295 SUPERFAMILY SSF53187 3 292 2.78E-70 T 12-10-2018 Vc3S01_2115 3373004e1812db26dd56a9c8dc109fca 583 Gene3D G3DSA:1.10.3720.10 394 583 1.7E-11 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_2115 3373004e1812db26dd56a9c8dc109fca 583 Gene3D G3DSA:1.10.3720.10 104 318 7.4E-11 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_2115 3373004e1812db26dd56a9c8dc109fca 583 SUPERFAMILY SSF161098 113 306 2.49E-8 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_2115 3373004e1812db26dd56a9c8dc109fca 583 SUPERFAMILY SSF161098 397 561 1.57E-15 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_2115 3373004e1812db26dd56a9c8dc109fca 583 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 143 318 1.9E-19 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Vc3S01_2115 3373004e1812db26dd56a9c8dc109fca 583 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 416 582 1.4E-13 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Vc3S01_1749 20e8b3eda89f60731b49a0cd6d0594fe 128 Gene3D G3DSA:1.20.120.550 3 128 2.4E-12 T 12-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily Vc3S01_1749 20e8b3eda89f60731b49a0cd6d0594fe 128 SUPERFAMILY SSF161084 4 124 1.9E-20 T 12-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily Vc3S01_1749 20e8b3eda89f60731b49a0cd6d0594fe 128 Pfam PF01124 MAPEG family 4 127 1.4E-16 T 12-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein Vc3S01_A0972 ebec05275f3363ea53c29d4aad5f8f8e 379 Pfam PF01594 AI-2E family transporter 23 349 2.9E-24 T 12-10-2018 IPR002549 Transmembrane protein TqsA-like Vc3S01_0857 3da8955c7093f7e3511a9cf70ab61d6c 147 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 3 142 2.8E-35 T 12-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 Vc3S01_0857 3da8955c7093f7e3511a9cf70ab61d6c 147 Pfam PF02050 Flagellar FliJ protein 17 140 1.7E-28 T 12-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 Vc3S01_0491 1dc2f9145e958622c43ea5ee08e77ebf 160 Gene3D G3DSA:3.90.960.10 6 157 4.2E-25 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Vc3S01_0491 1dc2f9145e958622c43ea5ee08e77ebf 160 Pfam PF04073 Aminoacyl-tRNA editing domain 38 148 1.9E-19 T 12-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 Vc3S01_0491 1dc2f9145e958622c43ea5ee08e77ebf 160 SUPERFAMILY SSF55826 7 150 1.83E-32 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Vc3S01_A0197 a2aadcb13c9e2dd00fb11c2970db172d 461 PIRSF PIRSF004919 1 461 2.7E-115 T 12-10-2018 IPR025502 TldD Vc3S01_A0197 a2aadcb13c9e2dd00fb11c2970db172d 461 Pfam PF01523 Putative modulator of DNA gyrase 21 314 2.6E-61 T 12-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 Vc3S01_A0197 a2aadcb13c9e2dd00fb11c2970db172d 461 SUPERFAMILY SSF111283 7 459 4.32E-113 T 12-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 Vc3S01_A0197 a2aadcb13c9e2dd00fb11c2970db172d 461 Gene3D G3DSA:3.30.2290.10 3 221 3.1E-19 T 12-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal Vc3S01_1563 e3a11e55b933942c5f949ee8aadc3f6f 162 Gene3D G3DSA:3.30.700.10 6 129 3.5E-5 T 12-10-2018 Vc3S01_1563 e3a11e55b933942c5f949ee8aadc3f6f 162 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 25 1.0E-6 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Vc3S01_1563 e3a11e55b933942c5f949ee8aadc3f6f 162 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 26 5.6E-7 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Vc3S01_1563 e3a11e55b933942c5f949ee8aadc3f6f 162 SUPERFAMILY SSF54523 6 67 4.63E-7 T 12-10-2018 Vc3S01_2971 72ea745bffd06b32e2fa8d8026822e89 360 TIGRFAM TIGR02380 ECA_wecA: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 5 347 1.4E-151 T 12-10-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819|MetaCyc: PWY-7905 Vc3S01_2971 72ea745bffd06b32e2fa8d8026822e89 360 Hamap MF_02030 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase [wecA]. 4 350 27.446 T 12-10-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819|MetaCyc: PWY-7905 Vc3S01_2971 72ea745bffd06b32e2fa8d8026822e89 360 Pfam PF00953 Glycosyl transferase family 4 70 231 1.9E-30 T 12-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 Vc3S01_1907 799bb5d03064ee01d9e6b23e50f03491 227 Pfam PF11813 Protein of unknown function (DUF3334) 3 227 9.0E-118 T 12-10-2018 IPR024513 Protein of unknown function DUF3334 Vc3S01_1907 799bb5d03064ee01d9e6b23e50f03491 227 Gene3D G3DSA:3.40.1550.10 7 173 3.0E-20 T 12-10-2018 IPR028976 CheC-like superfamily Vc3S01_1907 799bb5d03064ee01d9e6b23e50f03491 227 SUPERFAMILY SSF103039 10 173 7.98E-24 T 12-10-2018 IPR028976 CheC-like superfamily Vc3S01_A0708 b368ac962858b39c98aebdddf72fd00b 195 Pfam PF10076 Uncharacterised protein conserved in bacteria (DUF2313) 12 189 3.9E-42 T 12-10-2018 IPR018755 Bacteriophage Mu-like, Gp48 Vc3S01_2598 3074ecdd4bd46bc8b8859b402f1c2d38 119 Gene3D G3DSA:3.30.1450.10 34 117 8.4E-26 T 12-10-2018 IPR037873 BamE-like Vc3S01_2598 3074ecdd4bd46bc8b8859b402f1c2d38 119 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 7 112 32.054 T 12-10-2018 IPR026592 Outer membrane protein assembly factor BamE Vc3S01_2598 3074ecdd4bd46bc8b8859b402f1c2d38 119 Pfam PF04355 SmpA / OmlA family 35 103 5.6E-26 T 12-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 Vc3S01_A0530 e7f52c83005b68be8c250293ade8c412 177 Pfam PF10531 SLBB domain 105 155 1.7E-15 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Vc3S01_A0530 e7f52c83005b68be8c250293ade8c412 177 Pfam PF02563 Polysaccharide biosynthesis/export protein 23 99 1.3E-17 T 12-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 Vc3S01_A0530 e7f52c83005b68be8c250293ade8c412 177 SUPERFAMILY SSF142984 103 139 8.37E-5 T 12-10-2018 Vc3S01_A0530 e7f52c83005b68be8c250293ade8c412 177 Gene3D G3DSA:3.10.560.10 23 166 1.6E-22 T 12-10-2018 Vc3S01_A0530 e7f52c83005b68be8c250293ade8c412 177 Gene3D G3DSA:3.30.1950.10 31 103 1.6E-22 T 12-10-2018 Vc3S01_p30091 8296beaa52b29e27330fcdc5beb69fd5 397 Gene3D G3DSA:2.40.128.260 331 397 2.1E-6 T 12-10-2018 Vc3S01_p30091 8296beaa52b29e27330fcdc5beb69fd5 397 Gene3D G3DSA:2.40.128.260 210 330 3.9E-35 T 12-10-2018 Vc3S01_p30091 8296beaa52b29e27330fcdc5beb69fd5 397 Pfam PF03743 Bacterial conjugation TrbI-like protein 215 389 6.1E-42 T 12-10-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI Vc3S01_1128 3b1b6c284dd36c82cf1072039dc47821 97 Pfam PF06305 Lipopolysaccharide assembly protein A domain 22 81 2.7E-17 T 12-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 Vc3S01_1128 3b1b6c284dd36c82cf1072039dc47821 97 Hamap MF_01948 Lipopolysaccharide assembly protein A [lapA]. 1 93 20.446 T 12-10-2018 IPR032906 Lipopolysaccharide assembly protein A GO:0005886|GO:0008653 Vc3S01_0227 487b6994abe03a89dc0d8eae320ff418 125 Hamap MF_00709 Fumarate reductase subunit D [frdD]. 7 125 24.648 T 12-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 Vc3S01_0227 487b6994abe03a89dc0d8eae320ff418 125 SUPERFAMILY SSF81343 7 125 3.05E-50 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Vc3S01_0227 487b6994abe03a89dc0d8eae320ff418 125 ProDom PD015693 FUMARATE MEMBRANE REDUCTASE D SUBUNIT INNER TRANSMEMBRANE HYDROPHOBIC REDUCTASE POLYPEPTIDE 11 125 3.0E-48 T 12-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 Vc3S01_0227 487b6994abe03a89dc0d8eae320ff418 125 PIRSF PIRSF000179 6 125 8.2E-56 T 12-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 Vc3S01_0227 487b6994abe03a89dc0d8eae320ff418 125 Gene3D G3DSA:1.20.1300.10 6 125 3.1E-44 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Vc3S01_0227 487b6994abe03a89dc0d8eae320ff418 125 Pfam PF02313 Fumarate reductase subunit D 11 123 2.1E-44 T 12-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 Vc3S01_A0157 3befd9d6cd5d608cfd5784dddf1e2b78 102 SUPERFAMILY SSF141488 25 100 4.18E-16 T 12-10-2018 IPR036328 C-type lysozyme inhibitor superfamily Vc3S01_A0157 3befd9d6cd5d608cfd5784dddf1e2b78 102 Gene3D G3DSA:2.40.128.200 26 102 4.3E-16 T 12-10-2018 IPR036328 C-type lysozyme inhibitor superfamily Vc3S01_A0157 3befd9d6cd5d608cfd5784dddf1e2b78 102 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 30 88 3.2E-13 T 12-10-2018 IPR018660 C-type lysozyme inhibitor Vc3S01_0806 fe8df3315ad26313ae7bd443bf268034 238 Pfam PF00929 Exonuclease 13 180 1.3E-36 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Vc3S01_0806 fe8df3315ad26313ae7bd443bf268034 238 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 10 226 1.7E-80 T 12-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Vc3S01_0806 fe8df3315ad26313ae7bd443bf268034 238 SUPERFAMILY SSF53098 9 190 1.52E-53 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Vc3S01_0806 fe8df3315ad26313ae7bd443bf268034 238 SMART SM00479 11 189 6.3E-52 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Vc3S01_0806 fe8df3315ad26313ae7bd443bf268034 238 Gene3D G3DSA:3.30.420.10 4 194 4.1E-57 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Vc3S01_0806 fe8df3315ad26313ae7bd443bf268034 238 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 11 235 4.2E-94 T 12-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Vc3S01_0449 5cd1f77a89fea8ccc4f71acaf4dce31a 86 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 1 80 1.6E-15 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 Vc3S01_0449 5cd1f77a89fea8ccc4f71acaf4dce31a 86 SUPERFAMILY SSF52794 1 86 2.88E-26 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 Vc3S01_0449 5cd1f77a89fea8ccc4f71acaf4dce31a 86 Gene3D G3DSA:3.40.50.2300 1 86 2.4E-28 T 12-10-2018 Vc3S01_A1787 50f9005dc1f441db5678ebcbeca23b71 531 PIRSF PIRSF006446 1 329 2.5E-115 T 12-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 Vc3S01_A1787 50f9005dc1f441db5678ebcbeca23b71 531 PIRSF PIRSF006446 352 526 3.1E-35 T 12-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 Vc3S01_A1787 50f9005dc1f441db5678ebcbeca23b71 531 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 8 502 5.0E-175 T 12-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 Vc3S01_1079 b41be8bb58faa706a0a85d4e0fa971e0 358 ProSitePatterns PS01215 Mrp family signature. 201 217 - T 12-10-2018 IPR000808 Mrp, conserved site GO:0005524 Vc3S01_1079 b41be8bb58faa706a0a85d4e0fa971e0 358 SUPERFAMILY SSF52540 87 318 1.36E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_1079 b41be8bb58faa706a0a85d4e0fa971e0 358 Gene3D G3DSA:3.40.50.300 79 336 2.0E-83 T 12-10-2018 Vc3S01_1079 b41be8bb58faa706a0a85d4e0fa971e0 358 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 94 337 9.2E-99 T 12-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 Vc3S01_1079 b41be8bb58faa706a0a85d4e0fa971e0 358 Hamap MF_02040 Iron-sulfur cluster carrier protein. 89 338 36.344 T 12-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein Vc3S01_2189 99287067ac50c4087450a84d2f163c13 147 Gene3D G3DSA:3.30.420.270 63 136 7.0E-17 T 12-10-2018 Vc3S01_2189 99287067ac50c4087450a84d2f163c13 147 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 144 5.8E-26 T 12-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 Vc3S01_2189 99287067ac50c4087450a84d2f163c13 147 Hamap MF_02203 Tol-Pal system protein TolR [tolR]. 5 144 28.331 T 12-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 Vc3S01_2189 99287067ac50c4087450a84d2f163c13 147 TIGRFAM TIGR02801 tolR: protein TolR 12 144 1.3E-37 T 12-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 Vc3S01_0683 4981371c789bc158f0f1370af3f45101 368 Pfam PF14378 PAP2 superfamily 147 355 6.2E-32 T 12-10-2018 IPR026841 Inositolphosphotransferase Aur1/Ipt1 Vc3S01_A0116 8cc2024b7c5db01ab8cfb75126c5e022 446 PIRSF PIRSF006603 2 446 5.9E-67 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Vc3S01_A0116 8cc2024b7c5db01ab8cfb75126c5e022 446 TIGRFAM TIGR00797 matE: MATE efflux family protein 19 417 5.0E-58 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Vc3S01_A0116 8cc2024b7c5db01ab8cfb75126c5e022 446 Pfam PF01554 MatE 19 179 5.7E-25 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Vc3S01_A0116 8cc2024b7c5db01ab8cfb75126c5e022 446 Pfam PF01554 MatE 247 404 6.7E-22 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Vc3S01_1602 17a0b6e4c44c3b346fc579285bc32986 117 Pfam PF11042 Protein of unknown function (DUF2750) 13 113 2.3E-33 T 12-10-2018 IPR021284 Protein of unknown function DUF2750 Vc3S01_A1731 c1851b556cc5b8009ce8d521d69061bb 299 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 121 283 1.9E-27 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Vc3S01_A1731 c1851b556cc5b8009ce8d521d69061bb 299 SUPERFAMILY SSF161098 99 281 9.03E-38 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_A1731 c1851b556cc5b8009ce8d521d69061bb 299 Gene3D G3DSA:1.10.3720.10 95 288 3.1E-33 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_A0445 848762cb2c932d1f591d6affe3710839 316 Pfam PF04463 Protein of unknown function (DUF523) 7 148 3.8E-36 T 12-10-2018 IPR007553 Domain of unknown function DUF523 Vc3S01_A0445 848762cb2c932d1f591d6affe3710839 316 Pfam PF08349 Protein of unknown function (DUF1722) 191 307 1.8E-44 T 12-10-2018 IPR013560 Domain of unknown function DUF1722 Vc3S01_A0445 848762cb2c932d1f591d6affe3710839 316 PIRSF PIRSF037004 1 316 7.9E-140 T 12-10-2018 IPR017087 Uncharacterised conserved protein UCP037004 Vc3S01_0340 f99e7f8506d9304c8fb322ac2466f109 321 Pfam PF12835 Integrase 131 255 1.1E-15 T 12-10-2018 IPR024456 Integrase catalytic domain, putative Vc3S01_0340 f99e7f8506d9304c8fb322ac2466f109 321 SUPERFAMILY SSF56349 34 260 9.71E-14 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Vc3S01_0340 f99e7f8506d9304c8fb322ac2466f109 321 Gene3D G3DSA:1.10.150.130 25 125 2.3E-10 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal Vc3S01_A1543 13b65de56a33a153d584794ea1775f1f 366 PRINTS PR00164 ABC-2 type transport system membrane protein signature 308 327 1.7E-6 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Vc3S01_A1543 13b65de56a33a153d584794ea1775f1f 366 PRINTS PR00164 ABC-2 type transport system membrane protein signature 251 275 1.7E-6 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Vc3S01_A1543 13b65de56a33a153d584794ea1775f1f 366 PRINTS PR00164 ABC-2 type transport system membrane protein signature 288 307 1.7E-6 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Vc3S01_A1543 13b65de56a33a153d584794ea1775f1f 366 Pfam PF12698 ABC-2 family transporter protein 25 357 6.4E-45 T 12-10-2018 Vc3S01_p20092 d6aea4a5975c001caafe28267b1d7b62 393 TIGRFAM TIGR03187 DGQHR: DGQHR domain 18 297 2.0E-49 T 12-10-2018 IPR017601 DGQHR-containing domain Vc3S01_p20092 d6aea4a5975c001caafe28267b1d7b62 393 Pfam PF14072 DNA-sulfur modification-associated 11 359 5.2E-62 T 12-10-2018 IPR017642 DNA sulphur modification protein DndB Vc3S01_1070 03bb64d04a207ac8ca03d1550706bab3 486 Pfam PF00990 Diguanylate cyclase, GGDEF domain 332 483 4.3E-33 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_1070 03bb64d04a207ac8ca03d1550706bab3 486 SUPERFAMILY SSF55073 337 485 1.1E-35 T 12-10-2018 IPR029787 Nucleotide cyclase Vc3S01_1070 03bb64d04a207ac8ca03d1550706bab3 486 SMART SM00267 321 486 6.1E-34 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_1070 03bb64d04a207ac8ca03d1550706bab3 486 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 330 484 4.1E-40 T 12-10-2018 IPR000160 GGDEF domain Vc3S01_1070 03bb64d04a207ac8ca03d1550706bab3 486 Gene3D G3DSA:3.30.70.270 320 486 2.4E-43 T 12-10-2018 Vc3S01_A0283 6f8a94fc2733d85e86341df05abb9778 106 Pfam PF14302 Domain of unknown function (DUF4377) 35 105 1.4E-19 T 12-10-2018 IPR025485 Domain of unknown function DUF4377 Vc3S01_2258 6c6b793a130b22e3a4de3c6765849f85 519 Pfam PF04293 SpoVR like protein 26 456 2.2E-177 T 12-10-2018 IPR007390 Sporulation stage V, protein R Vc3S01_1057 1f62ae59281e9b6cc6cfca638562a249 306 SUPERFAMILY SSF161098 89 291 5.78E-22 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_1057 1f62ae59281e9b6cc6cfca638562a249 306 Gene3D G3DSA:1.10.3720.10 85 301 8.8E-24 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_1057 1f62ae59281e9b6cc6cfca638562a249 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 306 5.7E-43 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Vc3S01_0805 c2c709b4b2a7a59c6ecaf57deafcef25 154 Pfam PF00075 RNase H 3 141 1.1E-52 T 12-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 Vc3S01_0805 c2c709b4b2a7a59c6ecaf57deafcef25 154 Hamap MF_00042 Ribonuclease H [rnhA]. 2 149 36.431 T 12-10-2018 IPR022892 Ribonuclease HI GO:0004523 Vc3S01_0805 c2c709b4b2a7a59c6ecaf57deafcef25 154 Gene3D G3DSA:3.30.420.10 1 154 1.7E-59 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Vc3S01_0805 c2c709b4b2a7a59c6ecaf57deafcef25 154 SUPERFAMILY SSF53098 3 143 2.15E-57 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Vc3S01_0384 6dee869b05386bf6a1277cafd7e5318e 246 SUPERFAMILY SSF52540 9 223 5.82E-24 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0384 6dee869b05386bf6a1277cafd7e5318e 246 Pfam PF13401 AAA domain 7 133 1.4E-23 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_0384 6dee869b05386bf6a1277cafd7e5318e 246 Gene3D G3DSA:3.40.50.300 2 148 2.2E-13 T 12-10-2018 Vc3S01_2821 52187ec454d1e21f556351a8de195ee9 267 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 6 257 1.5E-73 T 12-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 Vc3S01_2821 52187ec454d1e21f556351a8de195ee9 267 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 264 17.588 T 12-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 Vc3S01_2821 52187ec454d1e21f556351a8de195ee9 267 Pfam PF02673 Bacitracin resistance protein BacA 6 258 9.6E-83 T 12-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 Vc3S01_2065 cb355cbdd5fe2a586d65a08e3c449ce9 88 Pfam PF11086 Protein of unknown function (DUF2878) 1 67 1.8E-12 T 12-10-2018 IPR021306 Protein of unknown function DUF2878 Vc3S01_A1974 294c7fe8d03a8e070305119859f32934 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 63 79 3.2E-8 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Vc3S01_A1974 294c7fe8d03a8e070305119859f32934 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 80 95 3.2E-8 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Vc3S01_A1974 294c7fe8d03a8e070305119859f32934 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 99 115 3.2E-8 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Vc3S01_A1974 294c7fe8d03a8e070305119859f32934 152 SMART SM00347 39 137 1.3E-25 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Vc3S01_A1974 294c7fe8d03a8e070305119859f32934 152 SUPERFAMILY SSF46785 12 151 7.81E-37 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A1974 294c7fe8d03a8e070305119859f32934 152 Gene3D G3DSA:1.10.10.10 10 152 6.7E-38 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A1974 294c7fe8d03a8e070305119859f32934 152 Pfam PF01047 MarR family 46 103 1.0E-16 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Vc3S01_0906 71e73c2d31d3293a821dbe228737cdfb 39 SUPERFAMILY SSF52218 1 38 1.05E-5 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Vc3S01_3014 c84fbc16f2f68951d0341768e908a2ab 316 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 9 309 1.6E-129 T 12-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 Vc3S01_3014 c84fbc16f2f68951d0341768e908a2ab 316 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 8 313 43.069 T 12-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 Vc3S01_3014 c84fbc16f2f68951d0341768e908a2ab 316 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 9 303 4.3E-71 T 12-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 Vc3S01_3014 c84fbc16f2f68951d0341768e908a2ab 316 PIRSF PIRSF026649 6 312 3.4E-78 T 12-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 Vc3S01_1829 584aa014418cd04147f752733e629190 368 Gene3D G3DSA:2.40.30.170 226 350 6.4E-26 T 12-10-2018 Vc3S01_1829 584aa014418cd04147f752733e629190 368 SUPERFAMILY SSF111369 189 296 1.44E-7 T 12-10-2018 Vc3S01_1829 584aa014418cd04147f752733e629190 368 Gene3D G3DSA:2.40.50.100 56 117 2.2E-9 T 12-10-2018 Vc3S01_1829 584aa014418cd04147f752733e629190 368 Gene3D G3DSA:1.10.287.470 118 184 1.9E-9 T 12-10-2018 Vc3S01_1829 584aa014418cd04147f752733e629190 368 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 55 286 5.9E-19 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Vc3S01_1829 584aa014418cd04147f752733e629190 368 SUPERFAMILY SSF111369 56 181 4.32E-12 T 12-10-2018 Vc3S01_A1443 bc049268306450618edf9f06de614879 511 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 11 214 24.095 T 12-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 Vc3S01_A1443 bc049268306450618edf9f06de614879 511 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 229 511 22.19 T 12-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 Vc3S01_A1443 bc049268306450618edf9f06de614879 511 SUPERFAMILY SSF53613 232 506 1.58E-72 T 12-10-2018 IPR029056 Ribokinase-like Vc3S01_A1443 bc049268306450618edf9f06de614879 511 PIRSF PIRSF017184 7 511 3.7E-135 T 12-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 Vc3S01_A1443 bc049268306450618edf9f06de614879 511 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 12 213 1.2E-53 T 12-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 Vc3S01_A1443 bc049268306450618edf9f06de614879 511 Pfam PF03853 YjeF-related protein N-terminus 32 193 6.6E-45 T 12-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 Vc3S01_A1443 bc049268306450618edf9f06de614879 511 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 235 505 1.7E-61 T 12-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 Vc3S01_A1443 bc049268306450618edf9f06de614879 511 Gene3D G3DSA:3.40.50.10260 5 219 1.6E-60 T 12-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 Vc3S01_A1443 bc049268306450618edf9f06de614879 511 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 446 456 - T 12-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site Vc3S01_A1443 bc049268306450618edf9f06de614879 511 SUPERFAMILY SSF64153 8 250 1.15E-65 T 12-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 Vc3S01_A1443 bc049268306450618edf9f06de614879 511 Pfam PF01256 Carbohydrate kinase 253 501 3.2E-54 T 12-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 Vc3S01_A1443 bc049268306450618edf9f06de614879 511 Gene3D G3DSA:3.40.1190.20 226 508 2.0E-82 T 12-10-2018 IPR029056 Ribokinase-like Vc3S01_2806 89b2c2335d3fc7f9a9e162551c31003a 147 Pfam PF06853 Protein of unknown function (DUF1249) 27 139 1.4E-38 T 12-10-2018 IPR009659 Protein of unknown function DUF1249 Vc3S01_2900 dda8d883b5214f21d23ef69b60c354a2 419 Pfam PF02687 FtsX-like permease family 317 410 1.9E-11 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Vc3S01_2900 dda8d883b5214f21d23ef69b60c354a2 419 Pfam PF12704 MacB-like periplasmic core domain 20 207 2.1E-10 T 12-10-2018 IPR025857 MacB-like periplasmic core domain Vc3S01_p20210 cbe7918aa0113ddd8886a855d3e10b17 111 SUPERFAMILY SSF46785 19 89 4.55E-8 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_p20210 cbe7918aa0113ddd8886a855d3e10b17 111 Pfam PF09339 IclR helix-turn-helix domain 20 65 2.2E-9 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Vc3S01_p20210 cbe7918aa0113ddd8886a855d3e10b17 111 Gene3D G3DSA:1.10.10.10 14 90 5.9E-11 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_3110 d969c1f6d7954903acccc8c3f23d4844 141 SUPERFAMILY SSF52402 3 139 2.01E-33 T 12-10-2018 Vc3S01_3110 d969c1f6d7954903acccc8c3f23d4844 141 Pfam PF00582 Universal stress protein family 3 138 8.7E-22 T 12-10-2018 IPR006016 UspA Vc3S01_3110 d969c1f6d7954903acccc8c3f23d4844 141 Gene3D G3DSA:3.40.50.620 2 141 4.1E-49 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Vc3S01_3110 d969c1f6d7954903acccc8c3f23d4844 141 PIRSF PIRSF006276 1 141 1.4E-53 T 12-10-2018 IPR006015 Universal stress protein A Vc3S01_p30127 e759aa778c361c00a125bf717678a27e 67 SUPERFAMILY SSF53098 2 64 6.83E-9 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Vc3S01_p30127 e759aa778c361c00a125bf717678a27e 67 Pfam PF13683 Integrase core domain 1 60 3.1E-15 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Vc3S01_1902 d20600e1dd1bd12ca5508f3750913c5f 249 Pfam PF03496 ADP-ribosyltransferase exoenzyme 45 208 3.1E-12 T 12-10-2018 IPR003540 ADP ribosyltransferase GO:0005576|GO:0009405 Vc3S01_1902 d20600e1dd1bd12ca5508f3750913c5f 249 SUPERFAMILY SSF56399 33 208 2.88E-40 T 12-10-2018 Vc3S01_1902 d20600e1dd1bd12ca5508f3750913c5f 249 Gene3D G3DSA:3.90.176.10 17 214 5.2E-36 T 12-10-2018 Vc3S01_2983 9dd73c036e5ddcb775f31dc2aa7048f0 269 Pfam PF00535 Glycosyl transferase family 2 44 128 1.7E-5 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Vc3S01_2983 9dd73c036e5ddcb775f31dc2aa7048f0 269 Gene3D G3DSA:3.90.550.10 10 190 4.1E-11 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Vc3S01_2983 9dd73c036e5ddcb775f31dc2aa7048f0 269 SUPERFAMILY SSF53448 44 242 1.13E-13 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Vc3S01_0510 34bb78a9307985c09eb299dd24f21ab5 321 Pfam PF03888 MucB/RseB N-terminal domain 26 195 1.4E-58 T 12-10-2018 IPR033434 MucB/RseB, N-terminal Vc3S01_0510 34bb78a9307985c09eb299dd24f21ab5 321 Gene3D G3DSA:3.30.200.100 218 317 1.7E-28 T 12-10-2018 IPR038484 MucB/RseB, C-terminal domain superfamily Vc3S01_0510 34bb78a9307985c09eb299dd24f21ab5 321 Gene3D G3DSA:2.50.20.10 24 208 5.1E-53 T 12-10-2018 Vc3S01_0510 34bb78a9307985c09eb299dd24f21ab5 321 Pfam PF17188 MucB/RseB C-terminal domain 218 311 1.0E-27 T 12-10-2018 IPR033436 MucB/RseB, C-terminal Vc3S01_0510 34bb78a9307985c09eb299dd24f21ab5 321 PIRSF PIRSF005427 1 318 3.2E-84 T 12-10-2018 IPR005588 MucB/RseB Vc3S01_1614 e039f3a329c2ebbe16a3b899897ad0c8 220 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 19 214 1.2E-38 T 12-10-2018 IPR006214 Bax inhibitor 1-related Vc3S01_1614 e039f3a329c2ebbe16a3b899897ad0c8 220 ProSitePatterns PS01243 Bax inhibitor-1 family signature. 88 118 - T 12-10-2018 IPR006213 Bax inhibitor 1, conserved site GO:0016021|GO:0043066 Vc3S01_2569 10717def4cf1efb7b51ff6fc8eeae4da 149 Pfam PF03477 ATP cone domain 50 136 1.1E-17 T 12-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 Vc3S01_2569 10717def4cf1efb7b51ff6fc8eeae4da 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 3.8E-73 T 12-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 Vc3S01_2569 10717def4cf1efb7b51ff6fc8eeae4da 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 90.421 T 12-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 Vc3S01_2359 559c2f0e85bda568eaf8b31a98a1abdd 1118 SUPERFAMILY SSF52540 25 220 5.15E-6 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A0165 403f84ab83173914928e06daade386c3 105 Gene3D G3DSA:2.40.10.320 1 58 1.6E-5 T 12-10-2018 Vc3S01_A0165 403f84ab83173914928e06daade386c3 105 Pfam PF13642 protein structure with unknown function 4 103 9.6E-33 T 12-10-2018 IPR025284 Protein of unknown function DUF4144 Vc3S01_2863 2aed08b91ba0b317bbfb9de5ddb5e9b4 781 Gene3D G3DSA:2.60.450.10 50 98 1.9E-5 T 12-10-2018 Vc3S01_2863 2aed08b91ba0b317bbfb9de5ddb5e9b4 781 Pfam PF03968 OstA-like protein 58 189 3.8E-17 T 12-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal Vc3S01_2863 2aed08b91ba0b317bbfb9de5ddb5e9b4 781 Pfam PF04453 Organic solvent tolerance protein 297 682 8.2E-112 T 12-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 Vc3S01_2863 2aed08b91ba0b317bbfb9de5ddb5e9b4 781 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 4 753 20.317 T 12-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 Vc3S01_A0523 d74216bec9455aa4520a216f3e500b4c 435 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 350 431 1.0E-6 T 12-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain Vc3S01_A0523 d74216bec9455aa4520a216f3e500b4c 435 Pfam PF01943 Polysaccharide biosynthesis protein 28 296 1.4E-8 T 12-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 Vc3S01_2896 2b858d865e873ed0482039a5f6e74fa9 183 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 24 182 2.1E-73 T 12-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ Vc3S01_2896 2b858d865e873ed0482039a5f6e74fa9 183 TIGRFAM TIGR01626 ytfJ_HI0045: conserved hypothetical protein YtfJ-family, TIGR01626 1 182 8.4E-83 T 12-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ Vc3S01_1035 0ecdf7fccc5451007ba2fe7ba6cd79af 230 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 7 208 1.4E-86 T 12-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 Vc3S01_1035 0ecdf7fccc5451007ba2fe7ba6cd79af 230 Pfam PF02508 Rnf-Nqr subunit, membrane protein 7 200 2.8E-65 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 Vc3S01_1035 0ecdf7fccc5451007ba2fe7ba6cd79af 230 PIRSF PIRSF006102 1 220 2.9E-77 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 Vc3S01_1035 0ecdf7fccc5451007ba2fe7ba6cd79af 230 Hamap MF_00478 Ion-translocating oxidoreductase complex subunit E [rsxE]. 1 210 27.949 T 12-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 Vc3S01_A1243 272babe439d10db6d6854a72ee739ddf 615 Pfam PF01757 Acyltransferase family 5 320 4.8E-31 T 12-10-2018 IPR002656 Acyltransferase 3 GO:0016747 Vc3S01_2589 2463535f21c043c3618aa8f85efc8f60 208 PIRSF PIRSF004525 1 208 1.7E-13 T 12-10-2018 IPR016419 Prepilin peptidase-dependent protein B, predicted Vc3S01_A0425 4ccc133a8daef44fd7a6a6439eeff8a5 245 SUPERFAMILY SSF141371 136 244 2.16E-32 T 12-10-2018 Vc3S01_A0425 4ccc133a8daef44fd7a6a6439eeff8a5 245 Gene3D G3DSA:2.40.10.220 135 245 9.4E-38 T 12-10-2018 Vc3S01_A0425 4ccc133a8daef44fd7a6a6439eeff8a5 245 SUPERFAMILY SSF141371 23 135 2.59E-32 T 12-10-2018 Vc3S01_A0425 4ccc133a8daef44fd7a6a6439eeff8a5 245 Pfam PF12945 Flagellar protein YcgR 36 125 7.1E-14 T 12-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal Vc3S01_A0425 4ccc133a8daef44fd7a6a6439eeff8a5 245 Pfam PF07238 PilZ domain 132 232 1.3E-13 T 12-10-2018 IPR009875 PilZ domain GO:0035438 Vc3S01_A0425 4ccc133a8daef44fd7a6a6439eeff8a5 245 Gene3D G3DSA:2.30.110.10 21 134 1.0E-40 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Vc3S01_2019 c1ed1cf694bf3c518536e330a8a3685b 223 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 219 2.1E-94 T 12-10-2018 IPR014319 Phage shock protein, PspA Vc3S01_2019 c1ed1cf694bf3c518536e330a8a3685b 223 Pfam PF04012 PspA/IM30 family 2 217 5.2E-61 T 12-10-2018 IPR007157 PspA/IM30 Vc3S01_3055 ffcfde9eccbf4237a34d8312c6bfa3be 238 SUPERFAMILY SSF54523 40 200 7.32E-56 T 12-10-2018 Vc3S01_3055 ffcfde9eccbf4237a34d8312c6bfa3be 238 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 5 196 1.7E-79 T 12-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 Vc3S01_3055 ffcfde9eccbf4237a34d8312c6bfa3be 238 Gene3D G3DSA:3.10.610.10 36 149 1.1E-36 T 12-10-2018 Vc3S01_3055 ffcfde9eccbf4237a34d8312c6bfa3be 238 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Vc3S01_3055 ffcfde9eccbf4237a34d8312c6bfa3be 238 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 2.5E-8 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Vc3S01_3055 ffcfde9eccbf4237a34d8312c6bfa3be 238 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 27 3.9E-9 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Vc3S01_3055 ffcfde9eccbf4237a34d8312c6bfa3be 238 Gene3D G3DSA:2.10.70.20 151 199 9.2E-14 T 12-10-2018 Vc3S01_3055 ffcfde9eccbf4237a34d8312c6bfa3be 238 Pfam PF11612 Type II secretion system (T2SS), protein J 57 194 2.2E-39 T 12-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 Vc3S01_0566 e51b8669d351d47ce8c03d320321b68a 170 SMART SM00644 5 156 2.5E-53 T 12-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Vc3S01_0566 e51b8669d351d47ce8c03d320321b68a 170 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 15 156 5.2E-26 T 12-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Vc3S01_0566 e51b8669d351d47ce8c03d320321b68a 170 SUPERFAMILY SSF55846 2 169 1.18E-60 T 12-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Vc3S01_0566 e51b8669d351d47ce8c03d320321b68a 170 Gene3D G3DSA:3.40.80.10 1 170 9.0E-51 T 12-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Vc3S01_A0187 30c2dd2fb1fd1c09d74382d7faa86dba 364 PIRSF PIRSF000014 1 364 1.9E-159 T 12-10-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 Vc3S01_A0187 30c2dd2fb1fd1c09d74382d7faa86dba 364 SUPERFAMILY SSF48695 14 176 1.03E-48 T 12-10-2018 IPR036280 Multiheme cytochrome superfamily Vc3S01_A0187 30c2dd2fb1fd1c09d74382d7faa86dba 364 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 5 174 2.3E-66 T 12-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal Vc3S01_A0187 30c2dd2fb1fd1c09d74382d7faa86dba 364 Gene3D G3DSA:1.10.3820.10 2 180 8.2E-36 T 12-10-2018 IPR038266 NapC/NirT cytochrome c superfamily Vc3S01_A0265 4312da23b9a23a060e0469b93098098c 192 Gene3D G3DSA:2.170.170.11 18 134 3.5E-29 T 12-10-2018 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 Vc3S01_A0265 4312da23b9a23a060e0469b93098098c 192 SUPERFAMILY SSF51645 20 187 5.36E-26 T 12-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 Vc3S01_A1995 c5ccbd3b685ca36d90ecd4157609d9a2 168 Gene3D G3DSA:3.40.630.30 1 160 3.4E-31 T 12-10-2018 Vc3S01_A1995 c5ccbd3b685ca36d90ecd4157609d9a2 168 SUPERFAMILY SSF55729 1 159 2.16E-27 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_A1995 c5ccbd3b685ca36d90ecd4157609d9a2 168 Pfam PF13673 Acetyltransferase (GNAT) domain 88 156 8.6E-9 T 12-10-2018 IPR000182 GNAT domain Vc3S01_A1192 6cc1021f8d01a9d57d659388a9fa8114 484 SUPERFAMILY SSF53300 319 475 1.37E-24 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Vc3S01_A1192 6cc1021f8d01a9d57d659388a9fa8114 484 Gene3D G3DSA:3.40.50.410 322 469 1.2E-7 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Vc3S01_A1192 6cc1021f8d01a9d57d659388a9fa8114 484 Pfam PF05762 VWA domain containing CoxE-like protein 316 447 1.1E-11 T 12-10-2018 IPR008912 Uncharacterised protein family CoxE-like Vc3S01_1666 e52e09f7d71cbe592aa58b63f9119c73 278 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 136 273 4.8E-18 T 12-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 Vc3S01_1666 e52e09f7d71cbe592aa58b63f9119c73 278 Gene3D G3DSA:1.10.530.10 131 275 1.4E-14 T 12-10-2018 Vc3S01_A1879 33f8ad082c6b1184c9ed4b832d1416b0 391 SUPERFAMILY SSF55347 148 316 2.49E-33 T 12-10-2018 Vc3S01_A1879 33f8ad082c6b1184c9ed4b832d1416b0 391 Gene3D G3DSA:3.30.360.10 147 388 5.1E-125 T 12-10-2018 Vc3S01_A1879 33f8ad082c6b1184c9ed4b832d1416b0 391 Gene3D G3DSA:3.40.50.720 17 363 5.1E-125 T 12-10-2018 Vc3S01_A1879 33f8ad082c6b1184c9ed4b832d1416b0 391 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 154 276 3.2E-12 T 12-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 Vc3S01_A1879 33f8ad082c6b1184c9ed4b832d1416b0 391 SUPERFAMILY SSF51735 9 173 2.3E-40 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_A1879 33f8ad082c6b1184c9ed4b832d1416b0 391 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 12 142 3.5E-27 T 12-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Vc3S01_1457 3ed6c863adac41805d6c500baa812822 194 Gene3D G3DSA:3.40.50.360 1 194 6.2E-55 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Vc3S01_1457 3ed6c863adac41805d6c500baa812822 194 SUPERFAMILY SSF52218 1 193 8.38E-52 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Vc3S01_1457 3ed6c863adac41805d6c500baa812822 194 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 194 31.659 T 12-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 Vc3S01_1457 3ed6c863adac41805d6c500baa812822 194 Pfam PF02525 Flavodoxin-like fold 3 191 2.8E-43 T 12-10-2018 IPR003680 Flavodoxin-like fold Vc3S01_A1323 87639f981d09d261985342f0f4978868 410 SUPERFAMILY SSF103473 9 402 8.63E-57 T 12-10-2018 IPR036259 MFS transporter superfamily Vc3S01_A1323 87639f981d09d261985342f0f4978868 410 Gene3D G3DSA:1.20.1250.20 3 401 5.4E-57 T 12-10-2018 Vc3S01_A1323 87639f981d09d261985342f0f4978868 410 Pfam PF07690 Major Facilitator Superfamily 15 294 2.9E-30 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Vc3S01_2260 1daeecf015ea74373340e4bdcd73fd21 59 Pfam PF03966 Trm112p-like protein 2 41 2.8E-11 T 12-10-2018 IPR005651 Trm112-like Vc3S01_2260 1daeecf015ea74373340e4bdcd73fd21 59 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 27.799 T 12-10-2018 IPR038053 Uncharacterised protein family UPF0434 Vc3S01_2260 1daeecf015ea74373340e4bdcd73fd21 59 Gene3D G3DSA:2.20.25.10 8 59 3.0E-24 T 12-10-2018 Vc3S01_2260 1daeecf015ea74373340e4bdcd73fd21 59 SUPERFAMILY SSF158997 1 54 1.05E-20 T 12-10-2018 Vc3S01_0905 da037eedb6d1781093cd13f63762a6b4 87 Pfam PF08891 YfcL protein 4 84 1.8E-33 T 12-10-2018 IPR014987 Uncharacterised protein family YfcL Vc3S01_3029 16d227fdd833076948386590d0d4f89f 175 Pfam PF01618 MotA/TolQ/ExbB proton channel family 52 168 1.3E-20 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Vc3S01_p10078 6892ac6b1c3065dc2d7a885ab42194fe 224 Gene3D G3DSA:3.10.450.230 90 222 2.9E-6 T 12-10-2018 Vc3S01_p10078 6892ac6b1c3065dc2d7a885ab42194fe 224 Pfam PF04335 VirB8 protein 16 219 1.7E-46 T 12-10-2018 IPR007430 Bacterial virulence protein VirB8 GO:0016020 Vc3S01_p10078 6892ac6b1c3065dc2d7a885ab42194fe 224 SUPERFAMILY SSF54427 91 219 1.93E-15 T 12-10-2018 IPR032710 NTF2-like domain superfamily Vc3S01_1542 450c655234a1e3fbe5cc2406a9e1254b 326 Pfam PF13533 Biotin-lipoyl like 47 91 1.6E-12 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain Vc3S01_1542 450c655234a1e3fbe5cc2406a9e1254b 326 Gene3D G3DSA:1.10.287.470 79 107 6.6E-11 T 12-10-2018 Vc3S01_1542 450c655234a1e3fbe5cc2406a9e1254b 326 Gene3D G3DSA:1.10.287.470 109 193 9.3E-20 T 12-10-2018 Vc3S01_1542 450c655234a1e3fbe5cc2406a9e1254b 326 Gene3D G3DSA:2.40.50.100 194 238 9.3E-20 T 12-10-2018 Vc3S01_1542 450c655234a1e3fbe5cc2406a9e1254b 326 Pfam PF13437 HlyD family secretion protein 208 312 3.2E-6 T 12-10-2018 Vc3S01_1542 450c655234a1e3fbe5cc2406a9e1254b 326 SUPERFAMILY SSF111369 44 275 1.12E-8 T 12-10-2018 Vc3S01_1542 450c655234a1e3fbe5cc2406a9e1254b 326 Gene3D G3DSA:2.40.30.170 239 322 9.3E-20 T 12-10-2018 Vc3S01_1542 450c655234a1e3fbe5cc2406a9e1254b 326 Gene3D G3DSA:2.40.50.100 44 78 6.6E-11 T 12-10-2018 Vc3S01_p30017 515f1e96e6824fb444a0712fb9ca68ac 222 Gene3D G3DSA:3.40.50.300 17 217 5.7E-30 T 12-10-2018 Vc3S01_p30017 515f1e96e6824fb444a0712fb9ca68ac 222 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 19 196 1.5E-11 T 12-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Vc3S01_p30017 515f1e96e6824fb444a0712fb9ca68ac 222 PIRSF PIRSF009320 17 210 1.1E-22 T 12-10-2018 Vc3S01_p30017 515f1e96e6824fb444a0712fb9ca68ac 222 SUPERFAMILY SSF52540 16 206 7.37E-25 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2574 3b962c89798458462ef401e846ac4483 154 SUPERFAMILY SSF53271 5 146 2.41E-27 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like Vc3S01_2574 3b962c89798458462ef401e846ac4483 154 Pfam PF00156 Phosphoribosyl transferase domain 28 145 6.3E-14 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Vc3S01_2574 3b962c89798458462ef401e846ac4483 154 Gene3D G3DSA:3.40.50.2020 1 152 4.4E-41 T 12-10-2018 Vc3S01_2574 3b962c89798458462ef401e846ac4483 154 Hamap MF_01903 Xanthine phosphoribosyltransferase [gpt]. 1 153 37.612 T 12-10-2018 IPR023747 Xanthine-guanine phosphoribosyltransferase GO:0000310 KEGG: 00230+2.4.2.22 Vc3S01_1372 b390e08d97e703393ef82f806415cbc0 172 Pfam PF03734 L,D-transpeptidase catalytic domain 18 135 2.2E-5 T 12-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 Vc3S01_1372 b390e08d97e703393ef82f806415cbc0 172 Pfam PF10908 Protein of unknown function (DUF2778) 18 150 2.3E-9 T 12-10-2018 IPR021225 Protein of unknown function DUF2778 Vc3S01_1133 8633514d1f67ce3acdfd59ddb59ca6d1 160 SUPERFAMILY SSF55961 21 152 9.46E-17 T 12-10-2018 Vc3S01_1133 8633514d1f67ce3acdfd59ddb59ca6d1 160 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 19 152 3.3E-12 T 12-10-2018 IPR019587 Polyketide cyclase/dehydrase Vc3S01_1133 8633514d1f67ce3acdfd59ddb59ca6d1 160 Gene3D G3DSA:3.30.530.20 1 155 2.1E-44 T 12-10-2018 IPR023393 START-like domain superfamily Vc3S01_2346 0fe31c3350c715d9340ca22990bcd9f2 365 SUPERFAMILY SSF159501 51 162 1.22E-7 T 12-10-2018 Vc3S01_3180 144f78cb152970454d5f21bfdc50540d 217 Pfam PF03006 Haemolysin-III related 12 207 2.7E-38 T 12-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 Vc3S01_3180 144f78cb152970454d5f21bfdc50540d 217 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 13 213 2.9E-69 T 12-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 Vc3S01_0881 8ccddb00740ee7b3939a0cab49f12dbc 222 PIRSF PIRSF002764 1 222 1.8E-84 T 12-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria Vc3S01_0881 8ccddb00740ee7b3939a0cab49f12dbc 222 Pfam PF03379 CcmB protein 5 219 5.4E-90 T 12-10-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 Vc3S01_0881 8ccddb00740ee7b3939a0cab49f12dbc 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 29 50 5.6E-70 T 12-10-2018 Vc3S01_0881 8ccddb00740ee7b3939a0cab49f12dbc 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 103 121 5.6E-70 T 12-10-2018 Vc3S01_0881 8ccddb00740ee7b3939a0cab49f12dbc 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 78 101 5.6E-70 T 12-10-2018 Vc3S01_0881 8ccddb00740ee7b3939a0cab49f12dbc 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 158 177 5.6E-70 T 12-10-2018 Vc3S01_0881 8ccddb00740ee7b3939a0cab49f12dbc 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 55 72 5.6E-70 T 12-10-2018 Vc3S01_0881 8ccddb00740ee7b3939a0cab49f12dbc 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 195 218 5.6E-70 T 12-10-2018 Vc3S01_0881 8ccddb00740ee7b3939a0cab49f12dbc 222 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 8 218 3.0E-91 T 12-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria Vc3S01_A1239 ec2fe89a7e3dc640d484505b2756b749 290 SUPERFAMILY SSF101386 169 267 1.87E-12 T 12-10-2018 Vc3S01_A1239 ec2fe89a7e3dc640d484505b2756b749 290 Gene3D G3DSA:3.30.460.40 1 156 1.2E-26 T 12-10-2018 Vc3S01_A1239 ec2fe89a7e3dc640d484505b2756b749 290 Gene3D G3DSA:1.10.287.1080 165 283 8.2E-13 T 12-10-2018 Vc3S01_A1239 ec2fe89a7e3dc640d484505b2756b749 290 SUPERFAMILY SSF81301 1 156 3.92E-35 T 12-10-2018 Vc3S01_A1239 ec2fe89a7e3dc640d484505b2756b749 290 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 192 258 2.9E-15 T 12-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core Vc3S01_A1963 4489a6ae359074f0b0c600ef708f6a7c 81 Pfam PF11730 Protein of unknown function (DUF3297) 10 80 1.1E-37 T 12-10-2018 IPR021724 Protein of unknown function DUF3297 Vc3S01_A0495 2f01f26a59808c93cf0a4b3c4aceda8c 661 Pfam PF00563 EAL domain 407 636 4.0E-61 T 12-10-2018 IPR001633 EAL domain Vc3S01_A0495 2f01f26a59808c93cf0a4b3c4aceda8c 661 SUPERFAMILY SSF141868 406 646 2.09E-70 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_A0495 2f01f26a59808c93cf0a4b3c4aceda8c 661 Gene3D G3DSA:3.20.20.450 401 659 2.4E-72 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_A0495 2f01f26a59808c93cf0a4b3c4aceda8c 661 Pfam PF02378 Phosphotransferase system, EIIC 89 295 3.0E-19 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 Vc3S01_A0495 2f01f26a59808c93cf0a4b3c4aceda8c 661 SMART SM00052 399 641 1.1E-70 T 12-10-2018 IPR001633 EAL domain Vc3S01_1687 73efe23493f0eddb57e3df83e291f613 266 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 48 78 1.7E-6 T 12-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 Vc3S01_1687 73efe23493f0eddb57e3df83e291f613 266 SUPERFAMILY SSF51695 43 252 1.13E-15 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 Vc3S01_1687 73efe23493f0eddb57e3df83e291f613 266 Gene3D G3DSA:3.20.20.190 38 255 2.5E-12 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 Vc3S01_0833 360b145a67763ffeabde01468945314a 83 Pfam PF09904 Winged helix-turn helix 1 79 1.2E-31 T 12-10-2018 IPR017162 Uncharacterised conserved protein UCP037266 Vc3S01_0833 360b145a67763ffeabde01468945314a 83 Gene3D G3DSA:1.10.10.10 1 83 4.5E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_0833 360b145a67763ffeabde01468945314a 83 PIRSF PIRSF037266 1 82 9.8E-35 T 12-10-2018 IPR017162 Uncharacterised conserved protein UCP037266 Vc3S01_A0676 b88696856636659b576e7f3646a7a731 133 Pfam PF08765 Mor transcription activator family 31 132 1.3E-30 T 12-10-2018 IPR014875 Mor transcription activator Vc3S01_A0676 b88696856636659b576e7f3646a7a731 133 Gene3D G3DSA:1.10.10.60 77 133 5.8E-21 T 12-10-2018 Vc3S01_A0676 b88696856636659b576e7f3646a7a731 133 Gene3D G3DSA:1.10.10.60 31 76 3.5E-5 T 12-10-2018 Vc3S01_A0676 b88696856636659b576e7f3646a7a731 133 SUPERFAMILY SSF46689 31 123 2.15E-22 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_0083 4017c0dd6aaddcfbb1abfd9fdab5fbe3 89 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 9 78 4.3E-14 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Vc3S01_0083 4017c0dd6aaddcfbb1abfd9fdab5fbe3 89 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 Vc3S01_0083 4017c0dd6aaddcfbb1abfd9fdab5fbe3 89 SUPERFAMILY SSF54292 1 87 9.04E-26 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Vc3S01_0083 4017c0dd6aaddcfbb1abfd9fdab5fbe3 89 Gene3D G3DSA:3.10.20.30 1 89 4.3E-23 T 12-10-2018 IPR012675 Beta-grasp domain superfamily Vc3S01_A1631 905e67643db6fdb23a9bf0f754ad8b76 346 Pfam PF14321 Domain of unknown function (DUF4382) 31 211 4.9E-21 T 12-10-2018 IPR025491 Domain of unknown function DUF4382 Vc3S01_A1946 b391434329c3f6d71cbf9929fb6e4449 468 SUPERFAMILY SSF52794 5 102 1.92E-32 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 Vc3S01_A1946 b391434329c3f6d71cbf9929fb6e4449 468 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 7 91 1.4E-32 T 12-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 Vc3S01_A1946 b391434329c3f6d71cbf9929fb6e4449 468 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 123 457 7.9E-51 T 12-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 Vc3S01_A1946 b391434329c3f6d71cbf9929fb6e4449 468 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 8 94 7.7E-18 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 Vc3S01_A1946 b391434329c3f6d71cbf9929fb6e4449 468 Pfam PF02378 Phosphotransferase system, EIIC 132 408 2.1E-15 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 Vc3S01_A1946 b391434329c3f6d71cbf9929fb6e4449 468 Gene3D G3DSA:3.40.50.2300 1 107 6.0E-37 T 12-10-2018 Vc3S01_1065 3932d28727062eb8a270303666223491 150 Hamap MF_01101 UPF0208 membrane protein YfbV [yfbV]. 5 150 36.031 T 12-10-2018 IPR007334 Uncharacterised protein family UPF0208 Vc3S01_1065 3932d28727062eb8a270303666223491 150 Pfam PF04217 Protein of unknown function, DUF412 8 146 4.9E-59 T 12-10-2018 IPR007334 Uncharacterised protein family UPF0208 Vc3S01_A0309 84c62a6b38817d8f933314afc0b651a0 278 Pfam PF02698 DUF218 domain 6 131 1.4E-14 T 12-10-2018 IPR003848 Domain of unknown function DUF218 Vc3S01_3101 9197a2eedcb4f61b05f5e47e75356b2a 302 SUPERFAMILY SSF103481 189 287 3.01E-9 T 12-10-2018 Vc3S01_3101 9197a2eedcb4f61b05f5e47e75356b2a 302 SUPERFAMILY SSF103481 51 144 2.48E-11 T 12-10-2018 Vc3S01_3101 9197a2eedcb4f61b05f5e47e75356b2a 302 Pfam PF00892 EamA-like transporter family 9 141 1.5E-17 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Vc3S01_3101 9197a2eedcb4f61b05f5e47e75356b2a 302 Pfam PF00892 EamA-like transporter family 155 286 1.6E-16 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Vc3S01_A0122 09c1f4adccac05d71f91831d83b9a7c9 123 Pfam PF05656 Protein of unknown function (DUF805) 12 119 6.0E-35 T 12-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 Vc3S01_A0504 d1bab99f32f4d64a53615815b542d934 112 Gene3D G3DSA:2.60.120.10 1 112 5.8E-49 T 12-10-2018 IPR014710 RmlC-like jelly roll fold Vc3S01_A0504 d1bab99f32f4d64a53615815b542d934 112 Pfam PF09313 Domain of unknown function (DUF1971) 14 94 5.1E-27 T 12-10-2018 IPR015392 Domain of unknown function DUF1971 Vc3S01_A0504 d1bab99f32f4d64a53615815b542d934 112 SUPERFAMILY SSF51197 4 101 2.29E-33 T 12-10-2018 Vc3S01_A0504 d1bab99f32f4d64a53615815b542d934 112 PIRSF PIRSF020632 3 112 8.1E-64 T 12-10-2018 IPR014510 Tellurite resistance predicted, YeaR Vc3S01_1469 9607588f3422a05197047018c6356336 475 Pfam PF13520 Amino acid permease 11 448 7.4E-59 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Vc3S01_1469 9607588f3422a05197047018c6356336 475 Gene3D G3DSA:1.20.1740.10 8 470 1.8E-43 T 12-10-2018 Vc3S01_1469 9607588f3422a05197047018c6356336 475 PIRSF PIRSF006060 8 472 1.3E-56 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Vc3S01_A1069 c2d54e6f2dbf8e61c137427df0180aa1 347 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 28 333 5.3E-106 T 12-10-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 Vc3S01_A1069 c2d54e6f2dbf8e61c137427df0180aa1 347 Pfam PF03741 Integral membrane protein TerC family 100 301 2.7E-54 T 12-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 Vc3S01_2143 9a82e8313b9d465d3168be1b5dcf1d5c 297 SUPERFAMILY SSF140591 75 272 1.8E-49 T 12-10-2018 Vc3S01_2143 9a82e8313b9d465d3168be1b5dcf1d5c 297 Pfam PF07201 HrpJ-like domain 60 226 4.1E-39 T 12-10-2018 IPR010812 Hypersensitivity response secretion-like, HrpJ GO:0009405|GO:0019867|GO:0046903 Vc3S01_2143 9a82e8313b9d465d3168be1b5dcf1d5c 297 TIGRFAM TIGR02568 LcrE: type III secretion regulator YopN/LcrE/InvE/MxiC 37 285 1.4E-76 T 12-10-2018 IPR013401 Type III secretion regulator, YopN/LcrE/InvE/MxiC GO:0009986|GO:0030254|GO:0050709 Vc3S01_0179 2ac0d077f44fe59621085fdde2a8df1d 132 Pfam PF13411 MerR HTH family regulatory protein 3 68 1.5E-17 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Vc3S01_0179 2ac0d077f44fe59621085fdde2a8df1d 132 SUPERFAMILY SSF46955 2 121 7.33E-34 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily Vc3S01_0179 2ac0d077f44fe59621085fdde2a8df1d 132 TIGRFAM TIGR02043 ZntR: Zn(II)-responsive transcriptional regulator 1 132 1.0E-68 T 12-10-2018 IPR011788 Zn(II)-responsive transcriptional regulator GO:0003677|GO:0006351|GO:0008270 Vc3S01_0179 2ac0d077f44fe59621085fdde2a8df1d 132 SMART SM00422 2 71 8.8E-30 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Vc3S01_0179 2ac0d077f44fe59621085fdde2a8df1d 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 1.7E-11 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Vc3S01_0179 2ac0d077f44fe59621085fdde2a8df1d 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 1.7E-11 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Vc3S01_0179 2ac0d077f44fe59621085fdde2a8df1d 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 1.7E-11 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Vc3S01_0179 2ac0d077f44fe59621085fdde2a8df1d 132 Gene3D G3DSA:1.10.1660.10 1 130 1.7E-36 T 12-10-2018 Vc3S01_A1836 b70a6a574586ca01b11eaa666b8058db 229 SUPERFAMILY SSF50475 10 199 9.81E-31 T 12-10-2018 Vc3S01_A1836 b70a6a574586ca01b11eaa666b8058db 229 Gene3D G3DSA:2.30.110.10 7 208 5.5E-45 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Vc3S01_A1836 b70a6a574586ca01b11eaa666b8058db 229 Pfam PF01613 Flavin reductase like domain 34 167 3.7E-15 T 12-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Vc3S01_2576 5ec8bccc6d8a3675bec79ba551d9db17 429 Pfam PF00860 Permease family 17 391 1.5E-54 T 12-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 Vc3S01_2576 5ec8bccc6d8a3675bec79ba551d9db17 429 PIRSF PIRSF005353 1 429 1.3E-186 T 12-10-2018 IPR026033 Purine permease PbuG-like Vc3S01_p40102 1e799c04941afa205d42c2640c0b53fa 337 Pfam PF00437 Type II/IV secretion system protein 20 313 2.5E-51 T 12-10-2018 IPR001482 Type II/IV secretion system protein Vc3S01_p40102 1e799c04941afa205d42c2640c0b53fa 337 Gene3D G3DSA:3.40.50.300 121 336 1.9E-60 T 12-10-2018 Vc3S01_p40102 1e799c04941afa205d42c2640c0b53fa 337 SUPERFAMILY SSF52540 14 317 2.39E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_p40102 1e799c04941afa205d42c2640c0b53fa 337 TIGRFAM TIGR02788 VirB11: P-type DNA transfer ATPase VirB11 24 326 1.5E-100 T 12-10-2018 IPR014155 Type IV secretion system protein VirB11 GO:0043684|GO:0044097 Vc3S01_p40102 1e799c04941afa205d42c2640c0b53fa 337 Gene3D G3DSA:3.30.450.90 15 120 1.5E-30 T 12-10-2018 Vc3S01_0890 227e5fc00937dada9bfa77603d1222dc 437 Gene3D G3DSA:2.40.160.60 26 437 1.9E-125 T 12-10-2018 Vc3S01_0890 227e5fc00937dada9bfa77603d1222dc 437 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 19 437 1.6E-131 T 12-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) Vc3S01_0890 227e5fc00937dada9bfa77603d1222dc 437 SUPERFAMILY SSF56935 26 437 2.01E-105 T 12-10-2018 Vc3S01_2168 64c5ccd3dec2946296c379d600096ca3 142 SUPERFAMILY SSF69635 3 128 3.92E-52 T 12-10-2018 Vc3S01_2168 64c5ccd3dec2946296c379d600096ca3 142 TIGRFAM TIGR02513 type_III_yscB: type III secretion system chaperone, YscB family 3 142 7.0E-46 T 12-10-2018 IPR013353 Type III secretion system chaperone YscB Vc3S01_2168 64c5ccd3dec2946296c379d600096ca3 142 Gene3D G3DSA:3.30.1460.10 2 128 1.7E-28 T 12-10-2018 Vc3S01_2168 64c5ccd3dec2946296c379d600096ca3 142 Pfam PF05932 Tir chaperone protein (CesT) family 4 122 7.6E-19 T 12-10-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 Vc3S01_2631 ee24942fca4cd0bb24fdc454cc84b3ee 318 SMART SM00530 19 80 3.5E-4 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Vc3S01_2631 ee24942fca4cd0bb24fdc454cc84b3ee 318 Pfam PF13413 Helix-turn-helix domain 20 78 1.2E-18 T 12-10-2018 Vc3S01_2631 ee24942fca4cd0bb24fdc454cc84b3ee 318 SUPERFAMILY SSF47413 13 80 9.85E-8 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Vc3S01_2631 ee24942fca4cd0bb24fdc454cc84b3ee 318 Pfam PF13464 Domain of unknown function (DUF4115) 243 316 6.8E-26 T 12-10-2018 IPR025194 Domain of unknown function DUF4115 Vc3S01_2631 ee24942fca4cd0bb24fdc454cc84b3ee 318 Gene3D G3DSA:1.10.260.40 6 116 2.2E-24 T 12-10-2018 Vc3S01_A1283 a0d216e54d818cb4f6595cbd99d513ce 507 Pfam PF13665 Domain of unknown function (DUF4150) 22 127 7.2E-35 T 12-10-2018 IPR025425 Domain of unknown function DUF4150 Vc3S01_A1028 70219a68989c542351c72a055c0faa52 241 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 2.6E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Vc3S01_A1028 70219a68989c542351c72a055c0faa52 241 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 2.6E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Vc3S01_A1028 70219a68989c542351c72a055c0faa52 241 Gene3D G3DSA:1.10.357.10 1 201 5.0E-26 T 12-10-2018 Vc3S01_A1028 70219a68989c542351c72a055c0faa52 241 SUPERFAMILY SSF46689 9 87 2.0E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_A1028 70219a68989c542351c72a055c0faa52 241 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 67 2.6E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Vc3S01_3097 e43bc30f136879f7d3ecd96265e1b2cb 544 Pfam PF03109 ABC1 family 113 230 5.8E-36 T 12-10-2018 IPR004147 UbiB domain Vc3S01_3097 e43bc30f136879f7d3ecd96265e1b2cb 544 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 3 539 56.522 T 12-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 Vc3S01_3097 e43bc30f136879f7d3ecd96265e1b2cb 544 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 6 445 4.0E-175 T 12-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 Vc3S01_3097 e43bc30f136879f7d3ecd96265e1b2cb 544 SUPERFAMILY SSF56112 94 436 1.95E-45 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily Vc3S01_A0681 c8076a0321481d17df05a70f92173051 101 ProDom PD283729 GP25 PHAGE SO2675 MEMBRANE MU-LIKE TRANSMEMBRANE HI1498 ECS4966 10 95 5.0E-23 T 12-10-2018 IPR020269 Bacteriophage Mu, Gp25 Vc3S01_A0681 c8076a0321481d17df05a70f92173051 101 Pfam PF10805 Protein of unknown function (DUF2730) 4 97 8.8E-29 T 12-10-2018 IPR020269 Bacteriophage Mu, Gp25 Vc3S01_1738 6e30bfbd09d500cc85c94ade6a163c76 249 SUPERFAMILY SSF53335 5 221 1.69E-31 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Vc3S01_1738 6e30bfbd09d500cc85c94ade6a163c76 249 Pfam PF13847 Methyltransferase domain 50 155 1.3E-18 T 12-10-2018 IPR025714 Methyltransferase domain Vc3S01_1738 6e30bfbd09d500cc85c94ade6a163c76 249 Gene3D G3DSA:3.40.50.150 3 222 1.1E-31 T 12-10-2018 Vc3S01_A0544 1f1ce9d25890abe8d552ef7d141cc807 301 PIRSF PIRSF016660 1 301 7.1E-119 T 12-10-2018 IPR008526 Inner membrane protein YedI Vc3S01_A0544 1f1ce9d25890abe8d552ef7d141cc807 301 Pfam PF05661 Protein of unknown function (DUF808) 4 290 1.3E-114 T 12-10-2018 IPR008526 Inner membrane protein YedI Vc3S01_1493 263620cd8de5d3f0aece405d9aaa49e0 633 SUPERFAMILY SSF54001 269 389 8.17E-9 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Vc3S01_1493 263620cd8de5d3f0aece405d9aaa49e0 633 Pfam PF12969 Domain of Unknown Function with PDB structure (DUF3857) 85 208 7.0E-15 T 12-10-2018 IPR024618 Domain of unknown function DUF3857 Vc3S01_1493 263620cd8de5d3f0aece405d9aaa49e0 633 Pfam PF01841 Transglutaminase-like superfamily 273 344 2.1E-5 T 12-10-2018 IPR002931 Transglutaminase-like Vc3S01_1493 263620cd8de5d3f0aece405d9aaa49e0 633 Gene3D G3DSA:2.60.40.3140 51 226 4.0E-11 T 12-10-2018 Vc3S01_1493 263620cd8de5d3f0aece405d9aaa49e0 633 Gene3D G3DSA:3.10.620.30 256 404 4.7E-36 T 12-10-2018 Vc3S01_2393 083d226210f5153aa52125e6ca5bd963 261 SUPERFAMILY SSF81345 2 253 4.45E-39 T 12-10-2018 IPR037294 ABC transporter, BtuC-like Vc3S01_2393 083d226210f5153aa52125e6ca5bd963 261 Gene3D G3DSA:1.10.3470.10 28 260 2.5E-8 T 12-10-2018 IPR037294 ABC transporter, BtuC-like Vc3S01_2393 083d226210f5153aa52125e6ca5bd963 261 Pfam PF00950 ABC 3 transport family 1 256 2.1E-73 T 12-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 Vc3S01_A1015 9cfc0a2e815c3ec589815cb45b66c811 248 Pfam PF01650 Peptidase C13 family 3 223 6.2E-9 T 12-10-2018 IPR001096 Peptidase C13, legumain GO:0006508|GO:0008233 Vc3S01_p20158 02c7b18689f8e71f6cc95eb563d34b6d 165 SUPERFAMILY SSF103481 49 152 1.44E-18 T 12-10-2018 Vc3S01_p20158 02c7b18689f8e71f6cc95eb563d34b6d 165 Pfam PF00892 EamA-like transporter family 16 147 2.0E-22 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Vc3S01_A0696 2f0dd126cf5999b85bee79e25b5a32de 180 Pfam PF05069 Phage virion morphogenesis family 17 171 2.1E-20 T 12-10-2018 IPR006522 Phage virion morphogensis protein Vc3S01_A0696 2f0dd126cf5999b85bee79e25b5a32de 180 TIGRFAM TIGR01635 tail_comp_S: phage virion morphogenesis protein 12 117 1.3E-11 T 12-10-2018 IPR006522 Phage virion morphogensis protein Vc3S01_1090 d1a29f63b69484c7b27289e3e045f618 56 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 16.766 T 12-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_1090 d1a29f63b69484c7b27289e3e045f618 56 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 2.4E-19 T 12-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_1090 d1a29f63b69484c7b27289e3e045f618 56 Pfam PF01783 Ribosomal L32p protein family 2 56 1.5E-19 T 12-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_1090 d1a29f63b69484c7b27289e3e045f618 56 SUPERFAMILY SSF57829 2 55 1.53E-17 T 12-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 Vc3S01_1012 145fdde655a59ef7a04714454b9e6d66 592 Gene3D G3DSA:3.40.50.300 343 571 1.3E-35 T 12-10-2018 Vc3S01_1012 145fdde655a59ef7a04714454b9e6d66 592 SUPERFAMILY SSF52540 116 578 4.46E-36 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_1012 145fdde655a59ef7a04714454b9e6d66 592 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 118 576 5.9E-92 T 12-10-2018 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 Vc3S01_A1371 a4385678b3d7c79cb87da831f6ba1dba 302 Gene3D G3DSA:3.40.50.1980 25 280 6.0E-89 T 12-10-2018 Vc3S01_A1371 a4385678b3d7c79cb87da831f6ba1dba 302 SUPERFAMILY SSF53807 20 282 1.7E-59 T 12-10-2018 Vc3S01_A1371 a4385678b3d7c79cb87da831f6ba1dba 302 Pfam PF01497 Periplasmic binding protein 41 275 8.8E-22 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain Vc3S01_A1371 a4385678b3d7c79cb87da831f6ba1dba 302 Gene3D G3DSA:3.40.50.1980 171 274 6.0E-89 T 12-10-2018 Vc3S01_A1113 61f0808798fbd3e66cfb28b8a7fa82b8 373 Pfam PF13729 F plasmid transfer operon, TraF, protein 49 289 2.3E-64 T 12-10-2018 IPR032811 Putative conjugal transfer protein TraF-related Vc3S01_A1727 0b0ce4d8fd2ce1b89e5f3a74dc653914 165 Gene3D G3DSA:3.30.420.130 3 99 5.3E-14 T 12-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily Vc3S01_A1727 0b0ce4d8fd2ce1b89e5f3a74dc653914 165 SUPERFAMILY SSF53146 1 110 1.96E-19 T 12-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily Vc3S01_A1727 0b0ce4d8fd2ce1b89e5f3a74dc653914 165 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 8 97 6.6E-15 T 12-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis Vc3S01_0883 5826bd2f14379e9fe92a3257bb12b9c5 68 Pfam PF04995 Heme exporter protein D (CcmD) 13 55 5.7E-17 T 12-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 Vc3S01_0883 5826bd2f14379e9fe92a3257bb12b9c5 68 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 10 56 8.1E-20 T 12-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 Vc3S01_A0944 2cfc3d8fa089bedfccd6f1473fd2a082 144 SUPERFAMILY SSF55729 1 140 1.47E-26 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_A0944 2cfc3d8fa089bedfccd6f1473fd2a082 144 Gene3D G3DSA:3.40.630.30 1 144 4.1E-31 T 12-10-2018 Vc3S01_A0944 2cfc3d8fa089bedfccd6f1473fd2a082 144 Pfam PF00583 Acetyltransferase (GNAT) family 26 121 7.7E-17 T 12-10-2018 IPR000182 GNAT domain Vc3S01_1105 4576d9bd652a934a430c904d1464ae0f 196 SUPERFAMILY SSF56925 28 196 1.83E-19 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel Vc3S01_1105 4576d9bd652a934a430c904d1464ae0f 196 Pfam PF13505 Outer membrane protein beta-barrel domain 12 196 2.2E-7 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel Vc3S01_1105 4576d9bd652a934a430c904d1464ae0f 196 Gene3D G3DSA:2.40.160.20 27 196 1.4E-11 T 12-10-2018 Vc3S01_A1151 903ea549cd9b4ecd4a0a5c16d5e25a9c 218 Pfam PF07885 Ion channel 126 210 6.4E-16 T 12-10-2018 IPR013099 Potassium channel domain Vc3S01_A1151 903ea549cd9b4ecd4a0a5c16d5e25a9c 218 Gene3D G3DSA:1.10.287.70 115 218 3.2E-18 T 12-10-2018 Vc3S01_A1151 903ea549cd9b4ecd4a0a5c16d5e25a9c 218 SUPERFAMILY SSF81324 109 211 6.8E-16 T 12-10-2018 Vc3S01_0657 b4745f95db28ebbc36ab6150631739e8 782 Gene3D G3DSA:2.40.10.220 466 582 7.9E-6 T 12-10-2018 Vc3S01_0657 b4745f95db28ebbc36ab6150631739e8 782 SUPERFAMILY SSF141371 466 549 8.63E-7 T 12-10-2018 Vc3S01_0657 b4745f95db28ebbc36ab6150631739e8 782 Pfam PF07238 PilZ domain 145 232 6.4E-8 T 12-10-2018 IPR009875 PilZ domain GO:0035438 Vc3S01_0657 b4745f95db28ebbc36ab6150631739e8 782 Pfam PF07238 PilZ domain 470 560 8.5E-12 T 12-10-2018 IPR009875 PilZ domain GO:0035438 Vc3S01_A1308 170a268c3e3c326618ab91a5ff152802 435 SUPERFAMILY SSF69304 91 203 1.06E-7 T 12-10-2018 Vc3S01_A0023 0e17a56ffd33c58e0f2acd32d12f8261 340 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 247 339 7.6E-7 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_A0023 0e17a56ffd33c58e0f2acd32d12f8261 340 SUPERFAMILY SSF55874 213 337 4.58E-16 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_A0023 0e17a56ffd33c58e0f2acd32d12f8261 340 Gene3D G3DSA:3.30.565.10 205 340 1.1E-17 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Vc3S01_A0023 0e17a56ffd33c58e0f2acd32d12f8261 340 SMART SM00387 242 340 1.5E-6 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Vc3S01_A0023 0e17a56ffd33c58e0f2acd32d12f8261 340 Pfam PF06580 Histidine kinase 149 227 8.5E-23 T 12-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 Vc3S01_2707 37c9f300b381b8c3bf3041552f52da36 168 Pfam PF01252 Signal peptidase (SPase) II 19 161 7.8E-38 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Vc3S01_2707 37c9f300b381b8c3bf3041552f52da36 168 ProSitePatterns PS00855 Signal peptidases II signature. 109 121 - T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Vc3S01_2707 37c9f300b381b8c3bf3041552f52da36 168 TIGRFAM TIGR00077 lspA: signal peptidase II 10 165 1.2E-48 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Vc3S01_2707 37c9f300b381b8c3bf3041552f52da36 168 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 106 121 3.0E-18 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Vc3S01_2707 37c9f300b381b8c3bf3041552f52da36 168 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 58 66 3.0E-18 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Vc3S01_2707 37c9f300b381b8c3bf3041552f52da36 168 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 142 158 3.0E-18 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Vc3S01_2707 37c9f300b381b8c3bf3041552f52da36 168 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 10 167 16.739 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Vc3S01_A0498 2ed74fd49e11529e6c6dcf8b00565151 409 Gene3D G3DSA:3.50.50.100 1 385 1.6E-102 T 12-10-2018 Vc3S01_A0498 2ed74fd49e11529e6c6dcf8b00565151 409 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 1.3E-9 T 12-10-2018 Vc3S01_A0498 2ed74fd49e11529e6c6dcf8b00565151 409 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 104 122 1.3E-9 T 12-10-2018 Vc3S01_A0498 2ed74fd49e11529e6c6dcf8b00565151 409 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 154 172 1.3E-9 T 12-10-2018 Vc3S01_A0498 2ed74fd49e11529e6c6dcf8b00565151 409 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 287 294 1.7E-9 T 12-10-2018 Vc3S01_A0498 2ed74fd49e11529e6c6dcf8b00565151 409 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 1.7E-9 T 12-10-2018 Vc3S01_A0498 2ed74fd49e11529e6c6dcf8b00565151 409 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 154 179 1.7E-9 T 12-10-2018 Vc3S01_A0498 2ed74fd49e11529e6c6dcf8b00565151 409 SUPERFAMILY SSF51905 3 201 3.21E-32 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_A0498 2ed74fd49e11529e6c6dcf8b00565151 409 SUPERFAMILY SSF51905 154 322 2.75E-22 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Vc3S01_A0498 2ed74fd49e11529e6c6dcf8b00565151 409 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 315 1.7E-53 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Vc3S01_A0834 b54fdaed519e4052f39a6d575586624a 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 273 4.3E-20 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Vc3S01_A0834 b54fdaed519e4052f39a6d575586624a 280 Gene3D G3DSA:1.10.3720.10 1 267 1.3E-62 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_A0834 b54fdaed519e4052f39a6d575586624a 280 SUPERFAMILY SSF161098 5 280 2.06E-68 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_A0324 8b70576480d474e59eac729e7a882ae0 342 PRINTS PR01010 Flagellar P-ring protein signature 59 78 2.3E-71 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Vc3S01_A0324 8b70576480d474e59eac729e7a882ae0 342 PRINTS PR01010 Flagellar P-ring protein signature 165 183 2.3E-71 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Vc3S01_A0324 8b70576480d474e59eac729e7a882ae0 342 PRINTS PR01010 Flagellar P-ring protein signature 139 157 2.3E-71 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Vc3S01_A0324 8b70576480d474e59eac729e7a882ae0 342 PRINTS PR01010 Flagellar P-ring protein signature 98 116 2.3E-71 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Vc3S01_A0324 8b70576480d474e59eac729e7a882ae0 342 PRINTS PR01010 Flagellar P-ring protein signature 81 98 2.3E-71 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Vc3S01_A0324 8b70576480d474e59eac729e7a882ae0 342 PRINTS PR01010 Flagellar P-ring protein signature 14 29 2.3E-71 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Vc3S01_A0324 8b70576480d474e59eac729e7a882ae0 342 PRINTS PR01010 Flagellar P-ring protein signature 229 241 2.3E-71 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Vc3S01_A0324 8b70576480d474e59eac729e7a882ae0 342 PRINTS PR01010 Flagellar P-ring protein signature 33 48 2.3E-71 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Vc3S01_A0324 8b70576480d474e59eac729e7a882ae0 342 Pfam PF02119 Flagellar P-ring protein 2 341 1.2E-137 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Vc3S01_A0324 8b70576480d474e59eac729e7a882ae0 342 Hamap MF_00416 Flagellar P-ring protein [flgI]. 1 342 35.236 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Vc3S01_A0988 9c478058b2b6d1bf8c7c0a1c20a7f799 391 SUPERFAMILY SSF103473 2 380 6.54E-57 T 12-10-2018 IPR036259 MFS transporter superfamily Vc3S01_A0988 9c478058b2b6d1bf8c7c0a1c20a7f799 391 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 8 371 3.8E-67 T 12-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 Vc3S01_A0988 9c478058b2b6d1bf8c7c0a1c20a7f799 391 Gene3D G3DSA:1.20.1720.10 1 377 4.6E-82 T 12-10-2018 Vc3S01_A0988 9c478058b2b6d1bf8c7c0a1c20a7f799 391 Pfam PF07690 Major Facilitator Superfamily 2 337 6.2E-40 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Vc3S01_A1859 ecafbc78667c1817a6ee47ba4166300a 686 SUPERFAMILY SSF51445 189 655 2.74E-93 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily Vc3S01_A1859 ecafbc78667c1817a6ee47ba4166300a 686 SMART SM00642 203 646 2.0E-93 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Vc3S01_A1859 ecafbc78667c1817a6ee47ba4166300a 686 PIRSF PIRSF036917 1 685 0.0 T 12-10-2018 IPR014635 Alpha-amylase, MalS type GO:0004556|GO:0005509|GO:0030980|GO:0042597|GO:0051692 KEGG: 00500+3.2.1.1 Vc3S01_A1859 ecafbc78667c1817a6ee47ba4166300a 686 Gene3D G3DSA:3.20.20.80 430 653 5.1E-38 T 12-10-2018 Vc3S01_A1859 ecafbc78667c1817a6ee47ba4166300a 686 Gene3D G3DSA:3.20.20.80 191 420 4.2E-56 T 12-10-2018 Vc3S01_A1859 ecafbc78667c1817a6ee47ba4166300a 686 Pfam PF00128 Alpha amylase, catalytic domain 236 606 8.1E-53 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Vc3S01_p10045 091a40cd124f987a23e7fd55a6ef427c 655 Pfam PF12696 TraM recognition site of TraD and TraG 404 527 6.6E-11 T 12-10-2018 IPR032689 TraD/TraG, TraM recognition site Vc3S01_p10045 091a40cd124f987a23e7fd55a6ef427c 655 PIRSF PIRSF003273 16 610 5.0E-217 T 12-10-2018 IPR016387 Mobilization, MobA Vc3S01_p10045 091a40cd124f987a23e7fd55a6ef427c 655 SUPERFAMILY SSF52540 160 542 2.39E-36 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_p10045 091a40cd124f987a23e7fd55a6ef427c 655 Gene3D G3DSA:3.40.50.300 357 558 1.9E-22 T 12-10-2018 Vc3S01_p10045 091a40cd124f987a23e7fd55a6ef427c 655 Gene3D G3DSA:3.40.50.300 132 303 9.4E-7 T 12-10-2018 Vc3S01_2286 1afdc8ad1ac7555a7918d2b87bd57e88 107 Gene3D G3DSA:3.30.70.20 2 103 1.8E-25 T 12-10-2018 Vc3S01_2286 1afdc8ad1ac7555a7918d2b87bd57e88 107 Pfam PF11953 Domain of unknown function (DUF3470) 68 107 9.9E-17 T 12-10-2018 IPR022569 Ferredoxin, C-terminal Vc3S01_2286 1afdc8ad1ac7555a7918d2b87bd57e88 107 SUPERFAMILY SSF54862 3 96 1.22E-22 T 12-10-2018 Vc3S01_2286 1afdc8ad1ac7555a7918d2b87bd57e88 107 Pfam PF13187 4Fe-4S dicluster domain 8 55 7.2E-7 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Vc3S01_2286 1afdc8ad1ac7555a7918d2b87bd57e88 107 PRINTS PR00354 7Fe ferredoxin signature 9 19 5.1E-11 T 12-10-2018 IPR000813 7Fe ferredoxin GO:0009055 Vc3S01_2286 1afdc8ad1ac7555a7918d2b87bd57e88 107 PRINTS PR00354 7Fe ferredoxin signature 35 52 5.1E-11 T 12-10-2018 IPR000813 7Fe ferredoxin GO:0009055 Vc3S01_2286 1afdc8ad1ac7555a7918d2b87bd57e88 107 PRINTS PR00354 7Fe ferredoxin signature 19 29 5.1E-11 T 12-10-2018 IPR000813 7Fe ferredoxin GO:0009055 Vc3S01_1472 b931fe5a1ac1f13dc5c35960e4e2a88e 302 PIRSF PIRSF026649 1 292 9.0E-90 T 12-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 Vc3S01_1472 b931fe5a1ac1f13dc5c35960e4e2a88e 302 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 1 294 2.8E-136 T 12-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 Vc3S01_1472 b931fe5a1ac1f13dc5c35960e4e2a88e 302 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 1 294 44.81 T 12-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 Vc3S01_1472 b931fe5a1ac1f13dc5c35960e4e2a88e 302 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 2 285 6.1E-86 T 12-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 Vc3S01_0628 edc7b78d2d12ae13fe45dd0247968d6b 151 Pfam PF17384 RimP C-terminal SH3 domain 86 151 1.2E-20 T 12-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal Vc3S01_0628 edc7b78d2d12ae13fe45dd0247968d6b 151 Pfam PF02576 RimP N-terminal domain 12 83 1.1E-28 T 12-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal Vc3S01_0628 edc7b78d2d12ae13fe45dd0247968d6b 151 SUPERFAMILY SSF75420 2 83 1.05E-25 T 12-10-2018 IPR035956 RimP, N-terminal domain superfamily Vc3S01_0628 edc7b78d2d12ae13fe45dd0247968d6b 151 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 151 24.075 T 12-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 Vc3S01_0628 edc7b78d2d12ae13fe45dd0247968d6b 151 Gene3D G3DSA:3.30.300.70 1 80 1.4E-25 T 12-10-2018 IPR035956 RimP, N-terminal domain superfamily Vc3S01_0628 edc7b78d2d12ae13fe45dd0247968d6b 151 SUPERFAMILY SSF74942 84 151 5.49E-17 T 12-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily Vc3S01_p20154 e7a3d47f768c6330cf32f0930ac9d660 992 Pfam PF01526 Tn3 transposase DDE domain 581 971 2.6E-121 T 12-10-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 Vc3S01_p20154 e7a3d47f768c6330cf32f0930ac9d660 992 Pfam PF13700 Domain of unknown function (DUF4158) 9 173 1.5E-30 T 12-10-2018 IPR025296 Domain of unknown function DUF4158 Vc3S01_0641 7789ded572b24394f821a41fc283b023 175 Pfam PF02036 SCP-2 sterol transfer family 42 134 4.8E-19 T 12-10-2018 IPR003033 SCP2 sterol-binding domain Vc3S01_0641 7789ded572b24394f821a41fc283b023 175 PIRSF PIRSF025550 1 174 4.8E-87 T 12-10-2018 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT Vc3S01_0641 7789ded572b24394f821a41fc283b023 175 Gene3D G3DSA:3.30.1050.10 12 139 1.9E-7 T 12-10-2018 IPR036527 SCP2 sterol-binding domain superfamily Vc3S01_0641 7789ded572b24394f821a41fc283b023 175 SUPERFAMILY SSF55718 44 139 1.51E-20 T 12-10-2018 IPR036527 SCP2 sterol-binding domain superfamily Vc3S01_A1761 3887b9aa12d54d1fafb88af356a59df9 901 SUPERFAMILY SSF48208 313 887 1.13E-27 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Vc3S01_A1761 3887b9aa12d54d1fafb88af356a59df9 901 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 8 595 7.2E-86 T 12-10-2018 IPR005887 Alpha-1,2-mannosidase, putative Vc3S01_A1761 3887b9aa12d54d1fafb88af356a59df9 901 Pfam PF07971 Glycosyl hydrolase family 92 286 891 3.2E-141 T 12-10-2018 IPR012939 Glycosyl hydrolase family 92 Vc3S01_1517 e9aeba20ffee6c1a382e6f6ab681503d 334 Gene3D G3DSA:3.20.20.100 4 332 5.6E-93 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Vc3S01_1517 e9aeba20ffee6c1a382e6f6ab681503d 334 PRINTS PR00069 Aldo-keto reductase signature 104 122 1.7E-6 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Vc3S01_1517 e9aeba20ffee6c1a382e6f6ab681503d 334 PRINTS PR00069 Aldo-keto reductase signature 135 152 1.7E-6 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Vc3S01_1517 e9aeba20ffee6c1a382e6f6ab681503d 334 PRINTS PR00069 Aldo-keto reductase signature 39 63 1.7E-6 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Vc3S01_1517 e9aeba20ffee6c1a382e6f6ab681503d 334 Pfam PF00248 Aldo/keto reductase family 12 298 4.5E-60 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain Vc3S01_1517 e9aeba20ffee6c1a382e6f6ab681503d 334 SUPERFAMILY SSF51430 9 315 4.45E-77 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Vc3S01_p20105 e1aa2a692565de31ebe97efd5d9b340e 258 Pfam PF01478 Type IV leader peptidase family 116 223 8.7E-14 T 12-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 Vc3S01_0918 c5545030699b63101ba02f25c73a07ee 163 Pfam PF02674 Colicin V production protein 4 142 1.3E-36 T 12-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 Vc3S01_p20128 e9f46a643b7b018b6862ba882af65ed2 607 Gene3D G3DSA:3.30.450.90 152 284 3.4E-7 T 12-10-2018 Vc3S01_p20128 e9f46a643b7b018b6862ba882af65ed2 607 Gene3D G3DSA:3.40.50.300 287 589 2.9E-64 T 12-10-2018 Vc3S01_p20128 e9f46a643b7b018b6862ba882af65ed2 607 Pfam PF00437 Type II/IV secretion system protein 177 467 6.2E-36 T 12-10-2018 IPR001482 Type II/IV secretion system protein Vc3S01_p20128 e9f46a643b7b018b6862ba882af65ed2 607 SUPERFAMILY SSF52540 180 583 1.57E-37 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2366 71b9ad808685c89f599b6c605ddfb1f6 314 Pfam PF03466 LysR substrate binding domain 90 295 2.3E-45 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_2366 71b9ad808685c89f599b6c605ddfb1f6 314 Gene3D G3DSA:1.10.10.10 5 92 8.1E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_2366 71b9ad808685c89f599b6c605ddfb1f6 314 Gene3D G3DSA:3.40.190.10 94 293 5.9E-60 T 12-10-2018 Vc3S01_2366 71b9ad808685c89f599b6c605ddfb1f6 314 Gene3D G3DSA:3.40.190.10 165 267 5.9E-60 T 12-10-2018 Vc3S01_2366 71b9ad808685c89f599b6c605ddfb1f6 314 SUPERFAMILY SSF46785 8 90 1.91E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_2366 71b9ad808685c89f599b6c605ddfb1f6 314 SUPERFAMILY SSF53850 90 299 1.19E-46 T 12-10-2018 Vc3S01_2366 71b9ad808685c89f599b6c605ddfb1f6 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 7.4E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_2229 8174b0643e3d8e136bb20616625dd68e 141 Pfam PF05433 Glycine zipper 2TM domain 46 80 3.4E-8 T 12-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 Vc3S01_2999 88046067d623b81414aff6ffbb8b0ecd 241 SUPERFAMILY SSF56112 43 191 1.75E-17 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily Vc3S01_2999 88046067d623b81414aff6ffbb8b0ecd 241 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 30 232 8.7E-67 T 12-10-2018 Vc3S01_2999 88046067d623b81414aff6ffbb8b0ecd 241 Gene3D G3DSA:1.10.510.10 140 239 9.2E-15 T 12-10-2018 Vc3S01_2999 88046067d623b81414aff6ffbb8b0ecd 241 Hamap MF_00521 3-deoxy-D-manno-octulosonic acid kinase [kdkA]. 1 234 40.275 T 12-10-2018 IPR022826 3-deoxy-D-manno-octulosonic acid kinase GO:0016773 KEGG: 00540+2.7.1.166|MetaCyc: PWY-7675|MetaCyc: PWY-7676 Vc3S01_p20113 fa364539dbf10392de7a0683174bd559 439 Gene3D G3DSA:3.40.50.140 1 127 3.3E-9 T 12-10-2018 Vc3S01_p20113 fa364539dbf10392de7a0683174bd559 439 SUPERFAMILY SSF56712 2 296 2.09E-20 T 12-10-2018 IPR023405 DNA topoisomerase, type IA, core domain Vc3S01_p20113 fa364539dbf10392de7a0683174bd559 439 Pfam PF01751 Toprim domain 3 94 8.5E-7 T 12-10-2018 IPR006171 TOPRIM domain Vc3S01_A0963 28a7161175e1253019eb6fe410f3bad0 333 Gene3D G3DSA:3.20.20.70 4 332 3.0E-93 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_A0963 28a7161175e1253019eb6fe410f3bad0 333 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 320 1.4E-61 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 Vc3S01_A0963 28a7161175e1253019eb6fe410f3bad0 333 SUPERFAMILY SSF51395 4 329 3.21E-86 T 12-10-2018 Vc3S01_A0281 85cb603fd4f26864f8de247adb55e3a6 179 Gene3D G3DSA:3.90.79.10 2 176 3.6E-40 T 12-10-2018 Vc3S01_A0281 85cb603fd4f26864f8de247adb55e3a6 179 SUPERFAMILY SSF55811 4 177 3.52E-36 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Vc3S01_A0281 85cb603fd4f26864f8de247adb55e3a6 179 Pfam PF00293 NUDIX domain 46 152 2.5E-6 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Vc3S01_0165 224f3dacc236c4351c5396a533cbd322 161 PIRSF PIRSF016548 1 161 8.0E-70 T 12-10-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 Vc3S01_0165 224f3dacc236c4351c5396a533cbd322 161 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 1 151 5.2E-55 T 12-10-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 Vc3S01_0165 224f3dacc236c4351c5396a533cbd322 161 Gene3D G3DSA:1.20.120.1370 1 154 1.4E-51 T 12-10-2018 IPR038309 Rsd/AlgQ superfamily Vc3S01_A0215 8ae7345a14b981a7926a46009b27e540 206 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 127 204 1.3E-16 T 12-10-2018 IPR006260 TonB/TolA, C-terminal Vc3S01_A0215 8ae7345a14b981a7926a46009b27e540 206 Gene3D G3DSA:3.30.1150.10 103 204 3.2E-25 T 12-10-2018 Vc3S01_A0215 8ae7345a14b981a7926a46009b27e540 206 SUPERFAMILY SSF74653 119 196 1.27E-22 T 12-10-2018 Vc3S01_A0215 8ae7345a14b981a7926a46009b27e540 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 121 142 1.9E-14 T 12-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 Vc3S01_A0215 8ae7345a14b981a7926a46009b27e540 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 142 160 1.9E-14 T 12-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 Vc3S01_A0215 8ae7345a14b981a7926a46009b27e540 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 161 178 1.9E-14 T 12-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 Vc3S01_A0215 8ae7345a14b981a7926a46009b27e540 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 63 73 1.9E-14 T 12-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 Vc3S01_A0215 8ae7345a14b981a7926a46009b27e540 206 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 125 204 1.2E-19 T 12-10-2018 IPR037682 TonB, C-terminal GO:0055085 Vc3S01_A1079 64eece8cc7d4da9ef46bf7556a5413b1 77 Pfam PF11869 Protein of unknown function (DUF3389) 1 76 5.7E-34 T 12-10-2018 IPR021811 Protein of unknown function DUF3389 Vc3S01_A0729 359601cbd94c9038584d780728d13d3d 206 PIRSF PIRSF006324 1 206 4.2E-44 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Vc3S01_A0729 359601cbd94c9038584d780728d13d3d 206 Pfam PF01810 LysE type translocator 15 205 9.1E-25 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Vc3S01_1686 4561066a744bb97d9bfa68b74d9f28eb 537 SUPERFAMILY SSF53649 230 465 4.58E-20 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Vc3S01_1686 4561066a744bb97d9bfa68b74d9f28eb 537 Pfam PF00884 Sulfatase 233 482 1.6E-28 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 Vc3S01_1686 4561066a744bb97d9bfa68b74d9f28eb 537 Gene3D G3DSA:3.40.720.10 217 509 3.6E-51 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Vc3S01_2533 7ee3b949230796784b9a954a884b8e49 508 SMART SM00862 33 111 1.6E-7 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Vc3S01_2533 7ee3b949230796784b9a954a884b8e49 508 SUPERFAMILY SSF46894 8 111 1.53E-14 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Vc3S01_2533 7ee3b949230796784b9a954a884b8e49 508 Gene3D G3DSA:1.10.10.10 10 129 7.3E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_2533 7ee3b949230796784b9a954a884b8e49 508 Pfam PF00486 Transcriptional regulatory protein, C terminal 35 111 5.7E-12 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Vc3S01_3017 f0e2fbc26814980a3216c47930b32e8d 288 Pfam PF08340 Domain of unknown function (DUF1732) 204 288 1.5E-34 T 12-10-2018 IPR013551 Domain of unknown function DUF1732 Vc3S01_3017 f0e2fbc26814980a3216c47930b32e8d 288 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 288 1.7E-118 T 12-10-2018 IPR005229 Conserved hypothetical protein CHP00255 Vc3S01_3017 f0e2fbc26814980a3216c47930b32e8d 288 Pfam PF03755 YicC-like family, N-terminal region 2 154 6.0E-44 T 12-10-2018 IPR013527 YicC-like, N-terminal Vc3S01_2024 8ec219492a2fc65997980c38bdcc3e16 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 237 323 1.4E-20 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Vc3S01_2024 8ec219492a2fc65997980c38bdcc3e16 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 305 5.9E-16 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Vc3S01_2024 8ec219492a2fc65997980c38bdcc3e16 331 SUPERFAMILY SSF52540 3 269 9.49E-51 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2024 8ec219492a2fc65997980c38bdcc3e16 331 Gene3D G3DSA:3.40.50.300 2 331 1.0E-73 T 12-10-2018 Vc3S01_2024 8ec219492a2fc65997980c38bdcc3e16 331 SMART SM00382 32 238 1.9E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_2024 8ec219492a2fc65997980c38bdcc3e16 331 Pfam PF00005 ABC transporter 24 187 1.5E-26 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_0770 2c77ea7144ccf9870786f5bc85c89402 147 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 29.655 T 12-10-2018 IPR003791 Protein of unknown function UPF0178 Vc3S01_0770 2c77ea7144ccf9870786f5bc85c89402 147 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 18 145 1.5E-47 T 12-10-2018 IPR003791 Protein of unknown function UPF0178 Vc3S01_A0806 ec799e62ddb3e31e28e8856ffad972bc 283 Pfam PF13737 Transposase DDE domain 1 106 1.5E-41 T 12-10-2018 IPR025668 Transposase DDE domain Vc3S01_A1320 885b6d16f136c717542fcc5f983defa5 196 Pfam PF04011 LemA family 6 196 5.8E-68 T 12-10-2018 IPR007156 LemA Vc3S01_A1320 885b6d16f136c717542fcc5f983defa5 196 Gene3D G3DSA:1.20.1440.20 15 196 4.7E-63 T 12-10-2018 IPR023353 LemA-like domain superfamily Vc3S01_A1320 885b6d16f136c717542fcc5f983defa5 196 SUPERFAMILY SSF140478 25 182 1.83E-55 T 12-10-2018 IPR023353 LemA-like domain superfamily Vc3S01_2429 f68074496ede09db24c6aa03a2642046 69 ProDom PD057827 ZN-RIBBON HI1126 PM0127 TRANSMEMBRANE ORF196EGC129 MEMBRANE SO2423 GLL0157 1 56 2.0E-4 T 12-10-2018 Vc3S01_A1042 7f249c4a42b7d5dfe4beb52459b383b5 265 SUPERFAMILY SSF161098 59 245 2.35E-45 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_A1042 7f249c4a42b7d5dfe4beb52459b383b5 265 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 59 153 4.1E-26 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Vc3S01_A1042 7f249c4a42b7d5dfe4beb52459b383b5 265 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 79 258 2.0E-20 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Vc3S01_A1042 7f249c4a42b7d5dfe4beb52459b383b5 265 Gene3D G3DSA:1.10.3720.10 50 260 1.2E-53 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_2010 95b316dd66b9fbe3e2698fd972510e35 284 SUPERFAMILY SSF158855 30 280 9.68E-66 T 12-10-2018 Vc3S01_2010 95b316dd66b9fbe3e2698fd972510e35 284 Pfam PF03280 Proteobacterial lipase chaperone protein 85 269 2.8E-40 T 12-10-2018 IPR004961 Lipase chaperone GO:0006457|GO:0016020|GO:0051082 Vc3S01_1412 3850a38395ecb1be7cb4357d921a7a2c 187 SUPERFAMILY SSF102114 12 134 6.08E-8 T 12-10-2018 Vc3S01_1412 3850a38395ecb1be7cb4357d921a7a2c 187 Gene3D G3DSA:3.20.20.70 1 178 5.2E-30 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_1412 3850a38395ecb1be7cb4357d921a7a2c 187 Pfam PF04055 Radical SAM superfamily 7 120 1.8E-8 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Vc3S01_0739 e53a01ede15d51480b6ad5a4b7e8c6cd 452 Pfam PF14344 Domain of unknown function (DUF4397) 138 224 1.6E-12 T 12-10-2018 IPR025510 Domain of unknown function DUF4397 Vc3S01_0739 e53a01ede15d51480b6ad5a4b7e8c6cd 452 Pfam PF14344 Domain of unknown function (DUF4397) 31 153 1.7E-19 T 12-10-2018 IPR025510 Domain of unknown function DUF4397 Vc3S01_0739 e53a01ede15d51480b6ad5a4b7e8c6cd 452 Pfam PF14344 Domain of unknown function (DUF4397) 247 369 5.5E-17 T 12-10-2018 IPR025510 Domain of unknown function DUF4397 Vc3S01_A1505 62d36a796834c96cac848d91260bea4c 50 SUPERFAMILY SSF51316 5 48 2.41E-5 T 12-10-2018 IPR011057 Mss4-like superfamily Vc3S01_1279 82ea3a3286a520b37cdec81dd69fc5d1 453 SUPERFAMILY SSF56322 9 452 1.7E-143 T 12-10-2018 IPR005801 ADC synthase GO:0009058 Vc3S01_1279 82ea3a3286a520b37cdec81dd69fc5d1 453 PRINTS PR00095 Anthranilate synthase component I signature 386 400 9.4E-18 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Vc3S01_1279 82ea3a3286a520b37cdec81dd69fc5d1 453 PRINTS PR00095 Anthranilate synthase component I signature 306 319 9.4E-18 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Vc3S01_1279 82ea3a3286a520b37cdec81dd69fc5d1 453 PRINTS PR00095 Anthranilate synthase component I signature 401 415 9.4E-18 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Vc3S01_1279 82ea3a3286a520b37cdec81dd69fc5d1 453 PRINTS PR00095 Anthranilate synthase component I signature 292 305 9.4E-18 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Vc3S01_1279 82ea3a3286a520b37cdec81dd69fc5d1 453 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 109 445 1.3E-121 T 12-10-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 Vc3S01_1279 82ea3a3286a520b37cdec81dd69fc5d1 453 Pfam PF00425 chorismate binding enzyme 191 444 1.4E-97 T 12-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal Vc3S01_1279 82ea3a3286a520b37cdec81dd69fc5d1 453 Gene3D G3DSA:3.60.120.10 4 453 2.1E-169 T 12-10-2018 IPR005801 ADC synthase GO:0009058 Vc3S01_1279 82ea3a3286a520b37cdec81dd69fc5d1 453 Pfam PF04715 Anthranilate synthase component I, N terminal region 19 153 1.5E-27 T 12-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Vc3S01_0763 3d495d3b9ac26542d36c7273fa7e0dae 68 Hamap MF_01064 UPF0253 protein YaeP [yaeP]. 1 68 30.011 T 12-10-2018 IPR009624 Uncharacterised protein family UPF0253 Vc3S01_0763 3d495d3b9ac26542d36c7273fa7e0dae 68 Pfam PF06786 Uncharacterised protein family (UPF0253) 1 67 3.3E-36 T 12-10-2018 IPR009624 Uncharacterised protein family UPF0253 Vc3S01_0763 3d495d3b9ac26542d36c7273fa7e0dae 68 ProDom PD054643 UPF0253 YAEP CYTOPLASMIC VP2335 YPO1064.1/Y3113/YP2785 VC0872 VV2574 PBPRA2947 VV11836 7 65 4.0E-26 T 12-10-2018 IPR009624 Uncharacterised protein family UPF0253 Vc3S01_0639 584c07a2e940046ce339072c2495dcc0 337 ProSitePatterns PS01276 Peptidase family U32 signature. 163 181 - T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 Vc3S01_0639 584c07a2e940046ce339072c2495dcc0 337 Pfam PF01136 Peptidase family U32 75 336 2.4E-69 T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 Vc3S01_2897 47c00b88d1ac2c9d99e52f0e23ccdf2a 99 Pfam PF10795 Protein of unknown function (DUF2607) 6 96 1.1E-26 T 12-10-2018 IPR019731 Protein of unknown function DUF2607 Vc3S01_2264 9964d3c8b2de65fd5941a0ae22f0928c 169 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 23 164 9.2E-46 T 12-10-2018 IPR018639 Domain of unknown function DUF2062 Vc3S01_0123 68fbc7d229d41757f9763793d4f801e9 224 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 7.8E-90 T 12-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 Vc3S01_0123 68fbc7d229d41757f9763793d4f801e9 224 Pfam PF00005 ABC transporter 18 165 2.6E-36 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_0123 68fbc7d229d41757f9763793d4f801e9 224 Gene3D G3DSA:3.40.50.300 1 223 3.0E-61 T 12-10-2018 Vc3S01_0123 68fbc7d229d41757f9763793d4f801e9 224 SMART SM00382 27 214 4.2E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_0123 68fbc7d229d41757f9763793d4f801e9 224 SUPERFAMILY SSF52540 1 220 1.77E-64 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0123 68fbc7d229d41757f9763793d4f801e9 224 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_0964 1ab78b78190d15ffbcc71a77ed90e2ee 391 Pfam PF05987 Bacterial protein of unknown function (DUF898) 9 383 1.8E-91 T 12-10-2018 IPR010295 Protein of unknown function DUF898 Vc3S01_A1517 d4cc61ecdd8821430bb843474145564a 423 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 99 5.6E-6 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Vc3S01_A1517 d4cc61ecdd8821430bb843474145564a 423 Gene3D G3DSA:3.40.50.720 159 320 4.6E-35 T 12-10-2018 Vc3S01_A1517 d4cc61ecdd8821430bb843474145564a 423 Pfam PF00107 Zinc-binding dehydrogenase 190 328 1.1E-10 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Vc3S01_A1517 d4cc61ecdd8821430bb843474145564a 423 SUPERFAMILY SSF50129 4 189 6.39E-21 T 12-10-2018 IPR011032 GroES-like superfamily Vc3S01_A1517 d4cc61ecdd8821430bb843474145564a 423 SUPERFAMILY SSF51735 159 338 6.78E-14 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_A1517 d4cc61ecdd8821430bb843474145564a 423 Gene3D G3DSA:3.90.180.10 16 351 4.6E-35 T 12-10-2018 Vc3S01_2112 fd066938dfc7de887aa4f460ca3ba044 183 SMART SM00862 8 81 7.1E-8 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Vc3S01_2112 fd066938dfc7de887aa4f460ca3ba044 183 SUPERFAMILY SSF46894 8 81 1.16E-11 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Vc3S01_2112 fd066938dfc7de887aa4f460ca3ba044 183 Gene3D G3DSA:1.10.10.10 4 92 2.7E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_2112 fd066938dfc7de887aa4f460ca3ba044 183 Pfam PF00486 Transcriptional regulatory protein, C terminal 9 81 5.2E-15 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Vc3S01_1242 1a1fd46eaaaa0fc2fa55a712bfd35f78 360 SUPERFAMILY SSF82171 67 307 1.37E-9 T 12-10-2018 Vc3S01_1242 1a1fd46eaaaa0fc2fa55a712bfd35f78 360 PIRSF PIRSF028101 4 360 3.7E-163 T 12-10-2018 IPR008311 Uncharacterised conserved protein UCP028101 Vc3S01_1242 1a1fd46eaaaa0fc2fa55a712bfd35f78 360 Pfam PF07433 Protein of unknown function (DUF1513) 67 359 8.2E-112 T 12-10-2018 IPR008311 Uncharacterised conserved protein UCP028101 Vc3S01_A1004 a85560a33cfe50606450c0af1741f8c0 289 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 281 35.408 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Vc3S01_A1004 a85560a33cfe50606450c0af1741f8c0 289 SUPERFAMILY SSF52096 25 284 1.59E-81 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Vc3S01_A1004 a85560a33cfe50606450c0af1741f8c0 289 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 2.2E-35 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Vc3S01_A1004 a85560a33cfe50606450c0af1741f8c0 289 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 2.2E-35 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Vc3S01_A1004 a85560a33cfe50606450c0af1741f8c0 289 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 2.2E-35 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Vc3S01_A1004 a85560a33cfe50606450c0af1741f8c0 289 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 2.2E-35 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Vc3S01_A1004 a85560a33cfe50606450c0af1741f8c0 289 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 2.2E-35 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Vc3S01_A1004 a85560a33cfe50606450c0af1741f8c0 289 Gene3D G3DSA:3.90.226.10 25 285 3.4E-79 T 12-10-2018 Vc3S01_A1004 a85560a33cfe50606450c0af1741f8c0 289 Pfam PF01039 Carboxyl transferase domain 99 240 5.2E-13 T 12-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 Vc3S01_A1004 a85560a33cfe50606450c0af1741f8c0 289 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 282 1.5E-129 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Vc3S01_1089 c02d5ab5a04215ad9ae7d67434583179 174 Pfam PF02620 Uncharacterized ACR, COG1399 62 173 9.3E-16 T 12-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD Vc3S01_A0507 d40e5fbb731a458b8c299795a48b4b14 311 Pfam PF03747 ADP-ribosylglycohydrolase 11 286 2.2E-51 T 12-10-2018 IPR005502 ADP-ribosylation/Crystallin J1 Vc3S01_A0507 d40e5fbb731a458b8c299795a48b4b14 311 Gene3D G3DSA:1.10.4080.10 3 309 2.6E-33 T 12-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily Vc3S01_A0507 d40e5fbb731a458b8c299795a48b4b14 311 SUPERFAMILY SSF101478 4 301 1.57E-40 T 12-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily Vc3S01_0711 b3d3f42d9d756237884ccd0a810615ea 284 PRINTS PR00783 Major intrinsic protein family signature 235 255 5.1E-51 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Vc3S01_0711 b3d3f42d9d756237884ccd0a810615ea 284 PRINTS PR00783 Major intrinsic protein family signature 153 171 5.1E-51 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Vc3S01_0711 b3d3f42d9d756237884ccd0a810615ea 284 PRINTS PR00783 Major intrinsic protein family signature 87 106 5.1E-51 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Vc3S01_0711 b3d3f42d9d756237884ccd0a810615ea 284 PRINTS PR00783 Major intrinsic protein family signature 11 30 5.1E-51 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Vc3S01_0711 b3d3f42d9d756237884ccd0a810615ea 284 PRINTS PR00783 Major intrinsic protein family signature 186 208 5.1E-51 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Vc3S01_0711 b3d3f42d9d756237884ccd0a810615ea 284 PRINTS PR00783 Major intrinsic protein family signature 50 74 5.1E-51 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Vc3S01_0711 b3d3f42d9d756237884ccd0a810615ea 284 ProSitePatterns PS00221 MIP family signature. 68 76 - T 12-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 Vc3S01_0711 b3d3f42d9d756237884ccd0a810615ea 284 Pfam PF00230 Major intrinsic protein 6 252 6.7E-64 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Vc3S01_0711 b3d3f42d9d756237884ccd0a810615ea 284 Gene3D G3DSA:1.20.1080.10 4 260 5.6E-98 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 Vc3S01_0711 b3d3f42d9d756237884ccd0a810615ea 284 TIGRFAM TIGR00861 MIP: MIP family channel proteins 15 252 2.7E-69 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Vc3S01_0711 b3d3f42d9d756237884ccd0a810615ea 284 SUPERFAMILY SSF81338 9 254 5.63E-75 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 Vc3S01_2962 c7dfb3d2d410481ebee55a74351826bc 56 SUPERFAMILY SSF53448 1 52 2.1E-6 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Vc3S01_2962 c7dfb3d2d410481ebee55a74351826bc 56 Gene3D G3DSA:3.90.550.10 1 56 2.3E-6 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Vc3S01_1835 58afde7ebed55fb799dfbe149b845d7d 203 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 31 94 4.0E-7 T 12-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 Vc3S01_A0260 38c50dcfe3f2bea83d316c9304cec43c 361 Pfam PF12060 Domain of unknown function (DUF3541) 30 252 3.0E-109 T 12-10-2018 IPR021928 Protein of unknown function DUF3541 Vc3S01_A0375 20d625b01f611a34da3f55459d7142e1 741 Pfam PF00563 EAL domain 479 715 8.1E-59 T 12-10-2018 IPR001633 EAL domain Vc3S01_A0375 20d625b01f611a34da3f55459d7142e1 741 Gene3D G3DSA:3.20.20.450 465 722 3.2E-74 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_A0375 20d625b01f611a34da3f55459d7142e1 741 SMART SM00052 472 720 7.5E-62 T 12-10-2018 IPR001633 EAL domain Vc3S01_A0375 20d625b01f611a34da3f55459d7142e1 741 SUPERFAMILY SSF141868 478 727 1.83E-68 T 12-10-2018 IPR035919 EAL domain superfamily Vc3S01_2625 84e933338c62f95af439c39d7671d1e8 292 SUPERFAMILY SSF55186 124 276 8.89E-14 T 12-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 Vc3S01_A1247 50eb26026a63f726cfe4b3708a8b34c9 159 SUPERFAMILY SSF55826 5 146 1.29E-28 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Vc3S01_A1247 50eb26026a63f726cfe4b3708a8b34c9 159 Gene3D G3DSA:3.90.960.10 15 155 3.2E-39 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Vc3S01_A1247 50eb26026a63f726cfe4b3708a8b34c9 159 Pfam PF04073 Aminoacyl-tRNA editing domain 35 143 8.4E-19 T 12-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 Vc3S01_A1558 db38d43f2e6ca8166ee76b6173638ad4 190 Pfam PF13508 Acetyltransferase (GNAT) domain 66 143 1.0E-8 T 12-10-2018 IPR000182 GNAT domain Vc3S01_A1558 db38d43f2e6ca8166ee76b6173638ad4 190 SUPERFAMILY SSF55729 26 148 7.09E-19 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_A1558 db38d43f2e6ca8166ee76b6173638ad4 190 Gene3D G3DSA:3.40.630.30 2 182 6.0E-24 T 12-10-2018 Vc3S01_2442 f4ec8fe88b03a1d0e407783efd8d211f 256 TIGRFAM TIGR03371 cellulose_yhjQ: cellulose synthase operon protein YhjQ 1 251 2.0E-69 T 12-10-2018 IPR017746 Cellulose synthase operon protein BcsQ Vc3S01_2442 f4ec8fe88b03a1d0e407783efd8d211f 256 Pfam PF06564 Cellulose biosynthesis protein BcsQ 1 248 3.6E-47 T 12-10-2018 IPR017746 Cellulose synthase operon protein BcsQ Vc3S01_2442 f4ec8fe88b03a1d0e407783efd8d211f 256 Gene3D G3DSA:3.40.50.300 1 253 8.0E-25 T 12-10-2018 Vc3S01_2442 f4ec8fe88b03a1d0e407783efd8d211f 256 SUPERFAMILY SSF52540 1 250 1.54E-22 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_3024 96fdf199fc340d27bf25f7cf8c873b22 347 Gene3D G3DSA:1.10.3720.10 133 339 1.9E-18 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_3024 96fdf199fc340d27bf25f7cf8c873b22 347 SUPERFAMILY SSF161098 139 325 7.98E-20 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_3024 96fdf199fc340d27bf25f7cf8c873b22 347 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 161 341 7.6E-28 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Vc3S01_2407 f7ebf634f04ac5df93c84872a7848fa8 255 PRINTS PR00412 Epoxide hydrolase signature 82 95 4.8E-6 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Vc3S01_2407 f7ebf634f04ac5df93c84872a7848fa8 255 PRINTS PR00412 Epoxide hydrolase signature 96 109 4.8E-6 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Vc3S01_2407 f7ebf634f04ac5df93c84872a7848fa8 255 PRINTS PR00412 Epoxide hydrolase signature 230 252 4.8E-6 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Vc3S01_2407 f7ebf634f04ac5df93c84872a7848fa8 255 PRINTS PR00412 Epoxide hydrolase signature 39 54 4.8E-6 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Vc3S01_2407 f7ebf634f04ac5df93c84872a7848fa8 255 Pfam PF12697 Alpha/beta hydrolase family 16 247 5.9E-25 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Vc3S01_2407 f7ebf634f04ac5df93c84872a7848fa8 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 96 109 9.3E-6 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Vc3S01_2407 f7ebf634f04ac5df93c84872a7848fa8 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 200 214 9.3E-6 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Vc3S01_2407 f7ebf634f04ac5df93c84872a7848fa8 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 39 54 9.3E-6 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Vc3S01_2407 f7ebf634f04ac5df93c84872a7848fa8 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 82 95 9.3E-6 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Vc3S01_2407 f7ebf634f04ac5df93c84872a7848fa8 255 SUPERFAMILY SSF53474 5 254 4.05E-52 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_2407 f7ebf634f04ac5df93c84872a7848fa8 255 Gene3D G3DSA:3.40.50.1820 3 254 1.0E-66 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_A1073 bb1465964434253763bd24506527b263 69 SUPERFAMILY SSF50182 18 68 3.27E-15 T 12-10-2018 IPR010920 LSM domain superfamily Vc3S01_A1073 bb1465964434253763bd24506527b263 69 Pfam PF06004 Bacterial protein of unknown function (DUF903) 20 68 1.4E-17 T 12-10-2018 IPR010305 Protein of unknown function DUF903 Vc3S01_A1073 bb1465964434253763bd24506527b263 69 Gene3D G3DSA:2.30.30.100 17 69 3.7E-19 T 12-10-2018 Vc3S01_A0919 5ddd968dc6b5baeec0d78bba8fb0bac2 327 Gene3D G3DSA:3.40.50.920 192 325 4.0E-42 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Vc3S01_A0919 5ddd968dc6b5baeec0d78bba8fb0bac2 327 Gene3D G3DSA:3.40.50.970 1 191 2.2E-73 T 12-10-2018 Vc3S01_A0919 5ddd968dc6b5baeec0d78bba8fb0bac2 327 Pfam PF02780 Transketolase, C-terminal domain 198 315 4.6E-36 T 12-10-2018 IPR033248 Transketolase, C-terminal domain Vc3S01_A0919 5ddd968dc6b5baeec0d78bba8fb0bac2 327 SMART SM00861 4 179 3.5E-60 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Vc3S01_A0919 5ddd968dc6b5baeec0d78bba8fb0bac2 327 SUPERFAMILY SSF52518 4 190 1.18E-62 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold Vc3S01_A0919 5ddd968dc6b5baeec0d78bba8fb0bac2 327 SUPERFAMILY SSF52922 190 323 2.22E-37 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Vc3S01_A0919 5ddd968dc6b5baeec0d78bba8fb0bac2 327 Pfam PF02779 Transketolase, pyrimidine binding domain 4 178 3.9E-47 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Vc3S01_0705 bfd24662fa8859991d58afb44d0b3605 394 Pfam PF05940 NnrS protein 16 388 3.8E-106 T 12-10-2018 IPR010266 NnrS Vc3S01_0284 939cd78f7b9ce685215dad51729ae130 317 Pfam PF01112 Asparaginase 11 314 2.4E-110 T 12-10-2018 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 Vc3S01_0284 939cd78f7b9ce685215dad51729ae130 317 SUPERFAMILY SSF56235 9 313 1.97E-97 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Vc3S01_0284 939cd78f7b9ce685215dad51729ae130 317 Gene3D G3DSA:3.60.20.30 182 317 9.9E-47 T 12-10-2018 Vc3S01_A0472 be7dc30118cefa4a4ab4cbe866a97a8b 247 Gene3D G3DSA:1.10.10.10 168 243 3.5E-12 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A0472 be7dc30118cefa4a4ab4cbe866a97a8b 247 SUPERFAMILY SSF51206 25 159 4.06E-19 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like Vc3S01_A0472 be7dc30118cefa4a4ab4cbe866a97a8b 247 Pfam PF00027 Cyclic nucleotide-binding domain 64 137 3.7E-7 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain Vc3S01_A0472 be7dc30118cefa4a4ab4cbe866a97a8b 247 SUPERFAMILY SSF46785 170 241 2.02E-11 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A0472 be7dc30118cefa4a4ab4cbe866a97a8b 247 SMART SM00419 185 233 1.7E-5 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Vc3S01_A0472 be7dc30118cefa4a4ab4cbe866a97a8b 247 Gene3D G3DSA:2.60.120.10 23 161 1.0E-14 T 12-10-2018 IPR014710 RmlC-like jelly roll fold Vc3S01_A0472 be7dc30118cefa4a4ab4cbe866a97a8b 247 Pfam PF13545 Crp-like helix-turn-helix domain 170 239 2.1E-11 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Vc3S01_p30083 3816c35226ad9018c7e6ef0ee76ecd65 117 Pfam PF05713 Bacterial mobilisation protein (MobC) 70 92 2.9E-5 T 12-10-2018 IPR008687 Bacterial mobilisation Vc3S01_A0773 9d720bd05bcc4298dbc3d026694bbcec 216 Gene3D G3DSA:3.40.50.880 1 216 1.1E-88 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Vc3S01_A0773 9d720bd05bcc4298dbc3d026694bbcec 216 PIRSF PIRSF006320 1 216 7.4E-107 T 12-10-2018 IPR026041 Glyoxalase ElbB Vc3S01_A0773 9d720bd05bcc4298dbc3d026694bbcec 216 SUPERFAMILY SSF52317 1 215 5.08E-61 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Vc3S01_3001 b374fd15a72445784d8644946c4f2077 260 SUPERFAMILY SSF53448 4 144 8.13E-23 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Vc3S01_3001 b374fd15a72445784d8644946c4f2077 260 Gene3D G3DSA:3.90.550.10 1 192 6.8E-20 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Vc3S01_3001 b374fd15a72445784d8644946c4f2077 260 Pfam PF00535 Glycosyl transferase family 2 5 96 1.7E-13 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Vc3S01_A0703 13d751e0588d667ea9e9e634f4acb072 439 Pfam PF07157 DNA circularisation protein N-terminus 7 92 9.7E-25 T 12-10-2018 IPR009826 DNA circulation, N-terminal Vc3S01_A0703 13d751e0588d667ea9e9e634f4acb072 439 ProDom PD332323 CIRCULATION DNA PROTEIN TAIL/DNA PHAGE PROPHAGE VIRION FLUMU BACTERIOPHAGE MU-LIKE 5 134 1.0E-57 T 12-10-2018 IPR009826 DNA circulation, N-terminal Vc3S01_A1475 18b90b76b56fe8777d4a12e542dd8e61 390 Pfam PF07690 Major Facilitator Superfamily 9 244 2.5E-14 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Vc3S01_A1475 18b90b76b56fe8777d4a12e542dd8e61 390 Pfam PF07690 Major Facilitator Superfamily 251 381 6.6E-13 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Vc3S01_A1475 18b90b76b56fe8777d4a12e542dd8e61 390 Gene3D G3DSA:1.20.1250.20 1 381 5.8E-37 T 12-10-2018 Vc3S01_A1475 18b90b76b56fe8777d4a12e542dd8e61 390 SUPERFAMILY SSF103473 2 380 1.29E-39 T 12-10-2018 IPR036259 MFS transporter superfamily Vc3S01_2166 b62166971b10058d837e59b3136ff012 433 SUPERFAMILY SSF49879 12 95 1.03E-6 T 12-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 Vc3S01_2166 b62166971b10058d837e59b3136ff012 433 Pfam PF16697 Inner membrane component of T3SS, cytoplasmic domain 7 98 7.3E-16 T 12-10-2018 IPR032030 YscD, cytoplasmic domain Vc3S01_2166 b62166971b10058d837e59b3136ff012 433 Pfam PF16693 Inner membrane component of T3SS, periplasmic domain 170 422 3.7E-123 T 12-10-2018 IPR032034 Yop protein translocation protein D, periplasmic domain Vc3S01_2166 b62166971b10058d837e59b3136ff012 433 Gene3D G3DSA:3.30.70.1770 296 357 3.0E-9 T 12-10-2018 Vc3S01_2166 b62166971b10058d837e59b3136ff012 433 Gene3D G3DSA:2.60.200.20 1 121 3.2E-14 T 12-10-2018 Vc3S01_2166 b62166971b10058d837e59b3136ff012 433 TIGRFAM TIGR02500 type_III_yscD: type III secretion apparatus protein, YscD/HrpQ family 4 422 8.3E-110 T 12-10-2018 IPR012843 Type III secretion system YscD/HrpQ Vc3S01_1822 4903ad3afa04c7586c23daaa0a9bf1fc 240 ProDom PD115044 PRECURSOR SIGNAL 3'REGION PLASMID CS5 9 209 3.0E-33 T 12-10-2018 Vc3S01_1577 9de1a4a090dc06818bb2a79c47adc6fa 464 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 51 461 5.9E-110 T 12-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath Vc3S01_A0575 5c3a03d3a036bb1b2eeb59a2aec2720e 297 SUPERFAMILY SSF53850 95 295 2.17E-18 T 12-10-2018 Vc3S01_A0575 5c3a03d3a036bb1b2eeb59a2aec2720e 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 3.4E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A0575 5c3a03d3a036bb1b2eeb59a2aec2720e 297 Gene3D G3DSA:1.10.10.10 3 86 7.8E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A0575 5c3a03d3a036bb1b2eeb59a2aec2720e 297 SUPERFAMILY SSF46785 5 89 5.44E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A0575 5c3a03d3a036bb1b2eeb59a2aec2720e 297 Gene3D G3DSA:3.40.190.290 95 295 1.7E-18 T 12-10-2018 Vc3S01_A0575 5c3a03d3a036bb1b2eeb59a2aec2720e 297 Pfam PF03466 LysR substrate binding domain 114 293 9.0E-14 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_1737 c452f18030eaf0702b9af9f3f4891ffd 220 Pfam PF08713 DNA alkylation repair enzyme 21 209 4.2E-37 T 12-10-2018 IPR014825 DNA alkylation repair enzyme Vc3S01_1737 c452f18030eaf0702b9af9f3f4891ffd 220 Gene3D G3DSA:1.25.10.90 18 218 4.3E-35 T 12-10-2018 Vc3S01_1737 c452f18030eaf0702b9af9f3f4891ffd 220 SUPERFAMILY SSF48371 17 211 1.51E-39 T 12-10-2018 IPR016024 Armadillo-type fold Vc3S01_2514 ea0c05390e35ad1ca59d27e1da975af8 365 Pfam PF02562 PhoH-like protein 120 323 1.7E-94 T 12-10-2018 IPR003714 PhoH-like protein GO:0005524 Vc3S01_2514 ea0c05390e35ad1ca59d27e1da975af8 365 SUPERFAMILY SSF52540 119 320 2.65E-39 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2514 ea0c05390e35ad1ca59d27e1da975af8 365 Gene3D G3DSA:3.40.50.300 117 323 4.0E-73 T 12-10-2018 Vc3S01_0997 970b13b4092d2fe9b7f10fcfae92ad5e 171 SUPERFAMILY SSF55729 39 151 8.65E-19 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_0997 970b13b4092d2fe9b7f10fcfae92ad5e 171 Pfam PF13302 Acetyltransferase (GNAT) domain 51 149 5.2E-14 T 12-10-2018 IPR000182 GNAT domain Vc3S01_0997 970b13b4092d2fe9b7f10fcfae92ad5e 171 Gene3D G3DSA:3.40.630.30 2 161 2.5E-18 T 12-10-2018 Vc3S01_A0080 05a3ce3b84a5937db315d08b6cd43320 202 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 11 186 1.4E-29 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT Vc3S01_A1972 6b891d779e0a5bb378c27478d1133aa0 365 SUPERFAMILY SSF48452 81 160 4.51E-9 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_A1972 6b891d779e0a5bb378c27478d1133aa0 365 Pfam PF02698 DUF218 domain 194 311 2.7E-19 T 12-10-2018 IPR003848 Domain of unknown function DUF218 Vc3S01_A1972 6b891d779e0a5bb378c27478d1133aa0 365 Gene3D G3DSA:1.25.40.10 21 233 7.5E-9 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_2970 c6ad3f9d7cbf4af5899eaa77617a61f4 280 SUPERFAMILY SSF53448 13 245 1.13E-32 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Vc3S01_2970 c6ad3f9d7cbf4af5899eaa77617a61f4 280 Pfam PF00535 Glycosyl transferase family 2 15 146 4.2E-15 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Vc3S01_2970 c6ad3f9d7cbf4af5899eaa77617a61f4 280 Gene3D G3DSA:3.90.550.10 2 258 3.0E-33 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Vc3S01_p10018 263c27efa436bfaf3052bbbd4a42d577 430 SUPERFAMILY SSF56849 28 221 4.84E-16 T 12-10-2018 IPR036716 Pesticidal crystal protein, N-terminal domain superfamily GO:0090729 Vc3S01_p10018 263c27efa436bfaf3052bbbd4a42d577 430 Pfam PF03945 delta endotoxin, N-terminal domain 33 242 3.5E-9 T 12-10-2018 IPR005639 Pesticidal crystal protein, N-terminal GO:0009405|GO:0090729 Vc3S01_p10018 263c27efa436bfaf3052bbbd4a42d577 430 Gene3D G3DSA:1.20.190.10 13 255 1.1E-76 T 12-10-2018 IPR036716 Pesticidal crystal protein, N-terminal domain superfamily GO:0090729 Vc3S01_p10018 263c27efa436bfaf3052bbbd4a42d577 430 SUPERFAMILY SSF51101 303 402 8.04E-5 T 12-10-2018 IPR036404 Jacalin-like lectin domain superfamily Vc3S01_A1225 ea3261d7b0ab9c173037b13c893c4523 176 PIRSF PIRSF028301 1 173 3.3E-65 T 12-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 Vc3S01_A1225 ea3261d7b0ab9c173037b13c893c4523 176 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 6 162 1.4E-59 T 12-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 Vc3S01_A1225 ea3261d7b0ab9c173037b13c893c4523 176 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 9 161 1.2E-60 T 12-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 Vc3S01_A1249 d06a00bb454392ba3112b2ef79e477b5 297 Gene3D G3DSA:2.40.160.60 24 297 1.1E-94 T 12-10-2018 Vc3S01_A1249 d06a00bb454392ba3112b2ef79e477b5 297 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 21 296 1.9E-83 T 12-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) Vc3S01_A1249 d06a00bb454392ba3112b2ef79e477b5 297 SUPERFAMILY SSF56935 24 296 9.16E-72 T 12-10-2018 Vc3S01_2182 bdd2b80065031604c864182b0c1a6cba 138 Pfam PF03994 Domain of Unknown Function (DUF350) 83 136 7.0E-14 T 12-10-2018 IPR007140 Protein of unknown function DUF350 Vc3S01_2182 bdd2b80065031604c864182b0c1a6cba 138 Pfam PF03994 Domain of Unknown Function (DUF350) 17 70 1.0E-11 T 12-10-2018 IPR007140 Protein of unknown function DUF350 Vc3S01_A1646 7f5c7efef6561feaadf98aba8ce9e465 180 Pfam PF06042 Nucleotidyltransferase 22 178 1.5E-61 T 12-10-2018 IPR009267 Putative nucleotidyltransferase Vc3S01_0279 4d15d16b5119c9dc80bdcba4ad1cbd6b 195 Pfam PF02525 Flavodoxin-like fold 10 176 5.0E-41 T 12-10-2018 IPR003680 Flavodoxin-like fold Vc3S01_0279 4d15d16b5119c9dc80bdcba4ad1cbd6b 195 SUPERFAMILY SSF52218 9 181 3.79E-46 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Vc3S01_0279 4d15d16b5119c9dc80bdcba4ad1cbd6b 195 Gene3D G3DSA:3.40.50.360 10 185 2.8E-52 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Vc3S01_0279 4d15d16b5119c9dc80bdcba4ad1cbd6b 195 Hamap MF_01415 Glutathione-regulated potassium-efflux system ancillary protein KefG [kefG]. 5 189 50.49 T 12-10-2018 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG GO:0006813 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 Vc3S01_p20054 9a05ecbdb5486ee64ff511e48d1f9e8a 348 Gene3D G3DSA:1.10.10.2830 166 284 1.9E-21 T 12-10-2018 Vc3S01_p20054 9a05ecbdb5486ee64ff511e48d1f9e8a 348 Pfam PF02195 ParB-like nuclease domain 62 161 2.4E-5 T 12-10-2018 IPR003115 ParB/Sulfiredoxin Vc3S01_2898 302c8d63518e489e7404272e1710bbfb 237 Pfam PF10986 Protein of unknown function (DUF2796) 28 232 3.1E-41 T 12-10-2018 IPR021253 Protein of unknown function DUF2796 Vc3S01_2004 e70526d3d2fc42c6bfa5f24f5f2f4f7c 230 TIGRFAM TIGR01621 RluA-like: pseudouridine synthase Rlu family protein, TIGR01621 1 220 1.0E-107 T 12-10-2018 IPR006508 Pseudouridine synthase, RluA-like Vc3S01_2004 e70526d3d2fc42c6bfa5f24f5f2f4f7c 230 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 47 61 - T 12-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Vc3S01_2004 e70526d3d2fc42c6bfa5f24f5f2f4f7c 230 SUPERFAMILY SSF55120 2 199 6.24E-48 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Vc3S01_2004 e70526d3d2fc42c6bfa5f24f5f2f4f7c 230 Pfam PF00849 RNA pseudouridylate synthase 10 153 1.3E-26 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Vc3S01_2004 e70526d3d2fc42c6bfa5f24f5f2f4f7c 230 Gene3D G3DSA:3.30.2350.10 1 195 1.8E-48 T 12-10-2018 Vc3S01_A1345 c6d47e0e10e560e8517feaa720cab84b 363 SUPERFAMILY SSF53300 103 300 8.6E-35 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Vc3S01_A1345 c6d47e0e10e560e8517feaa720cab84b 363 SMART SM00327 105 304 1.6E-25 T 12-10-2018 IPR002035 von Willebrand factor, type A Vc3S01_A1345 c6d47e0e10e560e8517feaa720cab84b 363 Pfam PF00092 von Willebrand factor type A domain 107 297 8.6E-26 T 12-10-2018 IPR002035 von Willebrand factor, type A Vc3S01_A1345 c6d47e0e10e560e8517feaa720cab84b 363 Gene3D G3DSA:3.40.50.410 105 304 2.1E-51 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Vc3S01_A1958 66d8bd2910dadd21e41f9833b5b77912 1039 Gene3D G3DSA:2.10.10.20 989 1039 9.9E-8 T 12-10-2018 Vc3S01_A1958 66d8bd2910dadd21e41f9833b5b77912 1039 SUPERFAMILY SSF51055 998 1038 8.44E-7 T 12-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 Vc3S01_A1958 66d8bd2910dadd21e41f9833b5b77912 1039 Gene3D G3DSA:2.60.40.10 887 978 3.6E-9 T 12-10-2018 IPR013783 Immunoglobulin-like fold Vc3S01_A0771 4667d4a81e28023e415707580becd61b 358 Pfam PF07995 Glucose / Sorbosone dehydrogenase 30 353 7.7E-111 T 12-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase Vc3S01_A0771 4667d4a81e28023e415707580becd61b 358 Gene3D G3DSA:2.120.10.30 15 358 5.8E-100 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Vc3S01_A0771 4667d4a81e28023e415707580becd61b 358 SUPERFAMILY SSF50952 17 350 4.45E-39 T 12-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 Vc3S01_2879 bef64ddcf65a1d0c70b674551d3fd3e7 322 SUPERFAMILY SSF53850 25 321 6.09E-89 T 12-10-2018 Vc3S01_2879 bef64ddcf65a1d0c70b674551d3fd3e7 322 Pfam PF16868 NMT1-like family 30 319 4.0E-98 T 12-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family Vc3S01_2879 bef64ddcf65a1d0c70b674551d3fd3e7 322 Gene3D G3DSA:3.40.190.10 117 255 1.1E-111 T 12-10-2018 Vc3S01_2879 bef64ddcf65a1d0c70b674551d3fd3e7 322 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 7 319 3.4E-114 T 12-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family Vc3S01_2879 bef64ddcf65a1d0c70b674551d3fd3e7 322 Gene3D G3DSA:3.40.190.10 30 319 1.1E-111 T 12-10-2018 Vc3S01_0427 ee0abacca027f34f8bd79b1ad4860f46 84 SUPERFAMILY SSF82657 4 82 2.88E-28 T 12-10-2018 IPR036065 BolA-like superfamily Vc3S01_0427 ee0abacca027f34f8bd79b1ad4860f46 84 Pfam PF01722 BolA-like protein 18 74 2.2E-14 T 12-10-2018 IPR002634 BolA protein Vc3S01_0427 ee0abacca027f34f8bd79b1ad4860f46 84 PIRSF PIRSF003113 2 83 3.3E-22 T 12-10-2018 IPR002634 BolA protein Vc3S01_0427 ee0abacca027f34f8bd79b1ad4860f46 84 Gene3D G3DSA:3.30.300.90 1 84 5.7E-33 T 12-10-2018 Vc3S01_0523 93b8173891e3067728fa6d5514b61400 546 Gene3D G3DSA:3.40.50.880 286 543 4.0E-105 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Vc3S01_0523 93b8173891e3067728fa6d5514b61400 546 SUPERFAMILY SSF52317 289 538 9.48E-88 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Vc3S01_0523 93b8173891e3067728fa6d5514b61400 546 Pfam PF00117 Glutamine amidotransferase class-I 301 535 5.4E-63 T 12-10-2018 IPR017926 Glutamine amidotransferase Vc3S01_0523 93b8173891e3067728fa6d5514b61400 546 TIGRFAM TIGR00337 PyrG: CTP synthase 2 535 8.2E-261 T 12-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 Vc3S01_0523 93b8173891e3067728fa6d5514b61400 546 Hamap MF_01227 CTP synthase [pyrG]. 3 540 51.257 T 12-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 Vc3S01_0523 93b8173891e3067728fa6d5514b61400 546 Pfam PF06418 CTP synthase N-terminus 5 265 9.5E-125 T 12-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 Vc3S01_0523 93b8173891e3067728fa6d5514b61400 546 Gene3D G3DSA:3.40.50.300 1 285 1.7E-133 T 12-10-2018 Vc3S01_0523 93b8173891e3067728fa6d5514b61400 546 SUPERFAMILY SSF52540 3 269 1.92E-121 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0109 e8f67d0e96f5cfef43c2429cd9f2ad13 164 SUPERFAMILY SSF52799 13 161 2.31E-30 T 12-10-2018 IPR029021 Protein-tyrosine phosphatase-like Vc3S01_0109 e8f67d0e96f5cfef43c2429cd9f2ad13 164 Gene3D G3DSA:3.90.190.10 5 164 2.7E-30 T 12-10-2018 IPR029021 Protein-tyrosine phosphatase-like Vc3S01_0109 e8f67d0e96f5cfef43c2429cd9f2ad13 164 Pfam PF05706 Cyclin-dependent kinase inhibitor 3 (CDKN3) 27 128 1.6E-8 T 12-10-2018 IPR022778 CDKN3 domain GO:0004721|GO:0004725 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Vc3S01_0109 e8f67d0e96f5cfef43c2429cd9f2ad13 164 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 109 119 - T 12-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 Vc3S01_p30033 a69bfea7ac2c41d5a14255ee0dd78671 82 Gene3D G3DSA:3.30.420.10 1 73 3.6E-5 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Vc3S01_p30033 a69bfea7ac2c41d5a14255ee0dd78671 82 SUPERFAMILY SSF53098 1 70 3.79E-15 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Vc3S01_p30033 a69bfea7ac2c41d5a14255ee0dd78671 82 Pfam PF13683 Integrase core domain 2 55 1.4E-12 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Vc3S01_A0910 075bd4888d96c9c0abda42e0d3648921 276 Gene3D G3DSA:3.40.190.10 159 249 1.3E-40 T 12-10-2018 Vc3S01_A0910 075bd4888d96c9c0abda42e0d3648921 276 Pfam PF03466 LysR substrate binding domain 88 238 1.2E-20 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_A0910 075bd4888d96c9c0abda42e0d3648921 276 Gene3D G3DSA:1.10.10.10 1 91 2.8E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A0910 075bd4888d96c9c0abda42e0d3648921 276 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 6.7E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A0910 075bd4888d96c9c0abda42e0d3648921 276 SUPERFAMILY SSF46785 1 87 5.9E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A0910 075bd4888d96c9c0abda42e0d3648921 276 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.5E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A0910 075bd4888d96c9c0abda42e0d3648921 276 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.5E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A0910 075bd4888d96c9c0abda42e0d3648921 276 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.5E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A0910 075bd4888d96c9c0abda42e0d3648921 276 Gene3D G3DSA:3.40.190.10 93 254 1.3E-40 T 12-10-2018 Vc3S01_A0910 075bd4888d96c9c0abda42e0d3648921 276 SUPERFAMILY SSF53850 88 255 1.01E-20 T 12-10-2018 Vc3S01_A0053 795d62123fd2b01e3f63dda5c7b6d346 204 Gene3D G3DSA:3.40.50.300 4 200 9.6E-49 T 12-10-2018 Vc3S01_A0053 795d62123fd2b01e3f63dda5c7b6d346 204 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 7 177 5.2E-37 T 12-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain Vc3S01_A0053 795d62123fd2b01e3f63dda5c7b6d346 204 PIRSF PIRSF005624 1 202 1.3E-47 T 12-10-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 Vc3S01_A0053 795d62123fd2b01e3f63dda5c7b6d346 204 SUPERFAMILY SSF52540 4 196 4.65E-35 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A0053 795d62123fd2b01e3f63dda5c7b6d346 204 Hamap MF_01389 Urease accessory protein UreG [ureG]. 3 201 46.738 T 12-10-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 Vc3S01_A0053 795d62123fd2b01e3f63dda5c7b6d346 204 TIGRFAM TIGR00101 ureG: urease accessory protein UreG 5 198 6.5E-102 T 12-10-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 Vc3S01_1898 628c6b0a5fa71bbff9f00f5b77ed313d 532 Pfam PF14891 Effector protein 59 239 9.7E-8 T 12-10-2018 IPR028208 Effector protein NleD-like Vc3S01_A1629 7a585c6fcd52423c780f0d153f181a75 217 Pfam PF12973 ChrR Cupin-like domain 127 211 2.7E-28 T 12-10-2018 IPR025979 ChrR-like cupin domain Vc3S01_A1629 7a585c6fcd52423c780f0d153f181a75 217 Pfam PF12973 ChrR Cupin-like domain 18 108 4.7E-40 T 12-10-2018 IPR025979 ChrR-like cupin domain Vc3S01_A1629 7a585c6fcd52423c780f0d153f181a75 217 SUPERFAMILY SSF51182 116 215 1.13E-24 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily Vc3S01_A1629 7a585c6fcd52423c780f0d153f181a75 217 SUPERFAMILY SSF51182 2 128 5.16E-38 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily Vc3S01_A1629 7a585c6fcd52423c780f0d153f181a75 217 Gene3D G3DSA:2.60.120.10 1 159 3.4E-66 T 12-10-2018 IPR014710 RmlC-like jelly roll fold Vc3S01_0637 fbafc82ede141d381425c3320f78d008 448 Pfam PF01554 MatE 15 176 4.7E-22 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Vc3S01_0637 fbafc82ede141d381425c3320f78d008 448 Pfam PF01554 MatE 240 398 1.8E-13 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Vc3S01_0637 fbafc82ede141d381425c3320f78d008 448 PIRSF PIRSF006603 1 442 2.9E-67 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Vc3S01_0637 fbafc82ede141d381425c3320f78d008 448 TIGRFAM TIGR00797 matE: MATE efflux family protein 15 410 1.1E-48 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Vc3S01_A0217 a3fd311118ab683cc3f777b9d03da01a 281 Pfam PF02517 CAAX protease self-immunity 179 268 1.1E-20 T 12-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 Vc3S01_0996 cb26831618658e1e7cc1591e51898593 304 Gene3D G3DSA:1.10.260.40 1 85 2.2E-13 T 12-10-2018 Vc3S01_0996 cb26831618658e1e7cc1591e51898593 304 SUPERFAMILY SSF47413 1 67 3.66E-10 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Vc3S01_0996 cb26831618658e1e7cc1591e51898593 304 SMART SM00530 6 66 6.8E-7 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Vc3S01_0996 cb26831618658e1e7cc1591e51898593 304 Pfam PF01381 Helix-turn-helix 7 62 1.3E-7 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Vc3S01_3189 de412e40b9319651cea6ec7a62e10f23 242 SUPERFAMILY SSF69593 2 236 4.71E-27 T 12-10-2018 Vc3S01_3189 de412e40b9319651cea6ec7a62e10f23 242 SMART SM00563 35 177 1.5E-19 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Vc3S01_3189 de412e40b9319651cea6ec7a62e10f23 242 Pfam PF01553 Acyltransferase 23 176 3.9E-16 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Vc3S01_1414 b7158c2a82f6b0c42a9335fb724a95d0 255 Pfam PF03741 Integral membrane protein TerC family 16 203 8.6E-44 T 12-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 Vc3S01_1190 70fdd94ad602888294836dcd06e939d5 133 PIRSF PIRSF007010 1 130 1.2E-53 T 12-10-2018 IPR016502 Type II secretion system (T2SS) pilotin, S protein Vc3S01_1190 70fdd94ad602888294836dcd06e939d5 133 Gene3D G3DSA:3.30.300.250 18 129 1.4E-40 T 12-10-2018 Vc3S01_1190 70fdd94ad602888294836dcd06e939d5 133 Pfam PF16549 Type II secretion system (T2SS) pilotin, S protein 14 127 8.7E-49 T 12-10-2018 IPR016502 Type II secretion system (T2SS) pilotin, S protein Vc3S01_0266 6025a465e00238908595df2ec5af313f 982 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 478 836 1.1E-6 T 12-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase Vc3S01_0266 6025a465e00238908595df2ec5af313f 982 Pfam PF00932 Lamin Tail Domain 20 129 9.1E-14 T 12-10-2018 IPR001322 Lamin tail domain Vc3S01_0266 6025a465e00238908595df2ec5af313f 982 SUPERFAMILY SSF56219 473 844 2.59E-34 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Vc3S01_0266 6025a465e00238908595df2ec5af313f 982 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 961 981 0.0041 T 12-10-2018 IPR020008 GlyGly-CTERM domain Vc3S01_A1112 05f972d28b78d6dc21c16c136df62318 51 ProDom PD026807 UPF0181 YOAH YPTB1650 VV20310 VPA0916 VCA0569 YPO1774/Y2534/YP1619 PLU2693 VVA0806 PM0480 1 48 1.0E-18 T 12-10-2018 IPR005371 Uncharacterised protein family UPF0181 Vc3S01_A1112 05f972d28b78d6dc21c16c136df62318 51 Hamap MF_00507 UPF0181 protein YoaH [yoaH]. 1 51 16.85 T 12-10-2018 IPR005371 Uncharacterised protein family UPF0181 Vc3S01_A1112 05f972d28b78d6dc21c16c136df62318 51 Pfam PF03701 Uncharacterised protein family (UPF0181) 1 49 4.6E-26 T 12-10-2018 IPR005371 Uncharacterised protein family UPF0181 Vc3S01_2304 3b547f36b90aa8585c6735e2b8533cbf 301 Pfam PF03601 Conserved hypothetical protein 698 15 282 8.8E-55 T 12-10-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 Vc3S01_A0194 3c72abae95902c5a6e374e9b8aa108ea 266 SUPERFAMILY SSF161098 68 253 4.58E-33 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_A0194 3c72abae95902c5a6e374e9b8aa108ea 266 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 255 2.7E-32 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Vc3S01_A0194 3c72abae95902c5a6e374e9b8aa108ea 266 Gene3D G3DSA:1.10.3720.10 63 260 7.5E-27 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_1714 ec7a76d95ef4dc12dc821404ca09abe6 64 Pfam PF14255 Cysteine-rich CPXCG 9 59 2.5E-21 T 12-10-2018 IPR025990 Cysteine-rich CPXCG protein Vc3S01_1714 ec7a76d95ef4dc12dc821404ca09abe6 64 PIRSF PIRSF037225 1 64 1.2E-23 T 12-10-2018 IPR017143 Uncharacterised conserved protein UCP037225 Vc3S01_1336 20f69964618a6bc207755323e186afce 210 Pfam PF13847 Methyltransferase domain 49 168 3.8E-16 T 12-10-2018 IPR025714 Methyltransferase domain Vc3S01_1336 20f69964618a6bc207755323e186afce 210 Gene3D G3DSA:3.40.50.150 24 209 3.2E-31 T 12-10-2018 Vc3S01_1336 20f69964618a6bc207755323e186afce 210 SUPERFAMILY SSF53335 3 197 1.64E-34 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Vc3S01_p30126 701324fbb60118e873619ced6da1fe8a 349 Pfam PF01051 Initiator Replication protein 22 262 1.8E-22 T 12-10-2018 IPR000525 Initiator Rep protein GO:0003887|GO:0005727|GO:0006270 Vc3S01_p30126 701324fbb60118e873619ced6da1fe8a 349 SUPERFAMILY SSF46785 147 266 3.26E-11 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_p30126 701324fbb60118e873619ced6da1fe8a 349 SUPERFAMILY SSF46785 23 137 9.07E-9 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_p30126 701324fbb60118e873619ced6da1fe8a 349 Gene3D G3DSA:1.10.10.10 13 126 1.0E-5 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_p10034 9ccde0e1e54dcd49c78984daebbb7300 297 PIRSF PIRSF037112 1 297 1.6E-116 T 12-10-2018 IPR017113 Antirestriction, ArdC Vc3S01_p10034 9ccde0e1e54dcd49c78984daebbb7300 297 Pfam PF08401 Domain of unknown function (DUF1738) 9 126 3.3E-36 T 12-10-2018 IPR013610 Domain of unknown function DUF1738 Vc3S01_2911 7b8045beb2833a964f6396b1d42ef782 150 Pfam PF13673 Acetyltransferase (GNAT) domain 46 148 3.5E-16 T 12-10-2018 IPR000182 GNAT domain Vc3S01_2911 7b8045beb2833a964f6396b1d42ef782 150 SUPERFAMILY SSF55729 1 148 1.2E-36 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_2911 7b8045beb2833a964f6396b1d42ef782 150 Gene3D G3DSA:3.40.630.30 1 149 1.5E-44 T 12-10-2018 Vc3S01_A1562 cc6aa289698ebf6d5016176b0f3352cb 120 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 115 5.6E-8 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Vc3S01_A1562 cc6aa289698ebf6d5016176b0f3352cb 120 SUPERFAMILY SSF54593 2 119 1.65E-23 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Vc3S01_A1562 cc6aa289698ebf6d5016176b0f3352cb 120 Gene3D G3DSA:3.10.180.10 1 119 2.7E-32 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Vc3S01_2746 02745d99ddd151579b5295244fd22659 156 PIRSF PIRSF028680 1 156 9.9E-76 T 12-10-2018 IPR016895 Uncharacterised conserved protein UCP028680 Vc3S01_2746 02745d99ddd151579b5295244fd22659 156 SUPERFAMILY SSF56935 44 156 2.16E-5 T 12-10-2018 Vc3S01_2017 73e506d40b6dc67d00f843a1d475d950 129 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 3 129 1.6E-48 T 12-10-2018 IPR014320 Phage shock protein, PspC Vc3S01_2017 73e506d40b6dc67d00f843a1d475d950 129 Pfam PF04024 PspC domain 4 62 3.7E-15 T 12-10-2018 IPR007168 Phage shock protein, PspC, N-terminal Vc3S01_A1648 3ed8cec3a7730b83bcc467bbd2f7b0b9 363 Gene3D G3DSA:3.20.20.70 1 363 5.3E-138 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_A1648 3ed8cec3a7730b83bcc467bbd2f7b0b9 363 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 3 340 2.1E-95 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 Vc3S01_A1648 3ed8cec3a7730b83bcc467bbd2f7b0b9 363 SUPERFAMILY SSF51395 1 363 7.0E-122 T 12-10-2018 Vc3S01_A0275 e01f1856c5780c002a458e04b22fdfb8 228 Pfam PF08279 HTH domain 6 59 4.9E-17 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 Vc3S01_A0275 e01f1856c5780c002a458e04b22fdfb8 228 Gene3D G3DSA:1.10.10.10 1 64 2.7E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A0275 e01f1856c5780c002a458e04b22fdfb8 228 SUPERFAMILY SSF46785 1 61 1.18E-10 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A0275 e01f1856c5780c002a458e04b22fdfb8 228 Pfam PF13280 WYL domain 140 225 5.4E-17 T 12-10-2018 IPR026881 WYL domain Vc3S01_p20062 7cf134dc2b63e3dac3912ae89344c50a 383 TIGRFAM TIGR03187 DGQHR: DGQHR domain 26 304 2.3E-25 T 12-10-2018 IPR017601 DGQHR-containing domain Vc3S01_p20062 7cf134dc2b63e3dac3912ae89344c50a 383 Pfam PF14072 DNA-sulfur modification-associated 28 260 5.8E-18 T 12-10-2018 IPR017642 DNA sulphur modification protein DndB Vc3S01_A0318 4a7f7f1294a56b963a0fbc3e85ec4696 144 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 7 142 3.8E-40 T 12-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 Vc3S01_A0318 4a7f7f1294a56b963a0fbc3e85ec4696 144 Pfam PF00460 Flagella basal body rod protein 11 32 1.2E-5 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Vc3S01_A0318 4a7f7f1294a56b963a0fbc3e85ec4696 144 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 95 140 4.0E-9 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Vc3S01_A1182 8d501fb169f6b2f8f0252a477ebfff4f 310 Pfam PF05235 CHAD domain 31 254 5.6E-40 T 12-10-2018 IPR007899 CHAD domain Vc3S01_A1182 8d501fb169f6b2f8f0252a477ebfff4f 310 SMART SM00880 26 288 1.7E-28 T 12-10-2018 IPR007899 CHAD domain Vc3S01_A1182 8d501fb169f6b2f8f0252a477ebfff4f 310 Gene3D G3DSA:1.40.20.10 9 308 3.0E-55 T 12-10-2018 IPR038186 CHAD domain superfamily Vc3S01_p10028 02f43b4382388a16357de67d2c2ebc32 197 Pfam PF11140 Protein of unknown function (DUF2913) 8 186 7.4E-20 T 12-10-2018 IPR021316 Protein of unknown function DUF2913 Vc3S01_0562 81a40a37ff7f0dd7013152095da26d9e 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 167 195 2.9E-19 T 12-10-2018 IPR003004 GspF/PilC family Vc3S01_0562 81a40a37ff7f0dd7013152095da26d9e 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 68 80 2.9E-19 T 12-10-2018 IPR003004 GspF/PilC family Vc3S01_0562 81a40a37ff7f0dd7013152095da26d9e 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 387 406 2.9E-19 T 12-10-2018 IPR003004 GspF/PilC family Vc3S01_0562 81a40a37ff7f0dd7013152095da26d9e 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 371 385 2.9E-19 T 12-10-2018 IPR003004 GspF/PilC family Vc3S01_0562 81a40a37ff7f0dd7013152095da26d9e 407 Gene3D G3DSA:1.20.81.30 259 370 1.1E-27 T 12-10-2018 Vc3S01_0562 81a40a37ff7f0dd7013152095da26d9e 407 Gene3D G3DSA:1.20.81.30 58 174 3.0E-29 T 12-10-2018 Vc3S01_0562 81a40a37ff7f0dd7013152095da26d9e 407 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 167 195 - T 12-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 Vc3S01_0562 81a40a37ff7f0dd7013152095da26d9e 407 Pfam PF00482 Type II secretion system (T2SS), protein F 72 195 4.1E-31 T 12-10-2018 IPR018076 Type II secretion system F domain Vc3S01_0562 81a40a37ff7f0dd7013152095da26d9e 407 Pfam PF00482 Type II secretion system (T2SS), protein F 276 398 2.6E-28 T 12-10-2018 IPR018076 Type II secretion system F domain Vc3S01_0503 073f09ee9dbcd2a7439911b349f017cd 148 Pfam PF04073 Aminoacyl-tRNA editing domain 18 137 7.8E-31 T 12-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 Vc3S01_0503 073f09ee9dbcd2a7439911b349f017cd 148 SUPERFAMILY SSF55826 1 147 2.22E-37 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Vc3S01_0503 073f09ee9dbcd2a7439911b349f017cd 148 Gene3D G3DSA:3.90.960.10 1 148 2.3E-40 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Vc3S01_1179 80b3c0ef41da8afb35626840300972d7 468 PRINTS PR00173 Glutamate-aspartate symporter signature 372 391 3.6E-16 T 12-10-2018 Vc3S01_1179 80b3c0ef41da8afb35626840300972d7 468 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 3.6E-16 T 12-10-2018 Vc3S01_1179 80b3c0ef41da8afb35626840300972d7 468 PRINTS PR00173 Glutamate-aspartate symporter signature 105 130 3.6E-16 T 12-10-2018 Vc3S01_1179 80b3c0ef41da8afb35626840300972d7 468 PRINTS PR00173 Glutamate-aspartate symporter signature 185 207 3.6E-16 T 12-10-2018 Vc3S01_1179 80b3c0ef41da8afb35626840300972d7 468 PRINTS PR00173 Glutamate-aspartate symporter signature 399 419 3.6E-16 T 12-10-2018 Vc3S01_1179 80b3c0ef41da8afb35626840300972d7 468 PRINTS PR00173 Glutamate-aspartate symporter signature 27 47 3.6E-16 T 12-10-2018 Vc3S01_1179 80b3c0ef41da8afb35626840300972d7 468 SUPERFAMILY SSF118215 30 444 5.89E-84 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 Vc3S01_1179 80b3c0ef41da8afb35626840300972d7 468 Pfam PF00375 Sodium:dicarboxylate symporter family 30 444 9.1E-92 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Vc3S01_1179 80b3c0ef41da8afb35626840300972d7 468 Gene3D G3DSA:1.10.3860.10 21 462 1.8E-97 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 Vc3S01_3030 db10defb879a1fb1f76b7dcf287a9ffc 135 Gene3D G3DSA:3.30.420.270 61 129 8.2E-10 T 12-10-2018 Vc3S01_3030 db10defb879a1fb1f76b7dcf287a9ffc 135 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 133 1.4E-32 T 12-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 Vc3S01_A0893 9cb236d1a8d5ca56a135eb98de887b54 329 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 17 323 2.6E-73 T 12-10-2018 IPR008257 Peptidase M19 GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 Vc3S01_A0893 9cb236d1a8d5ca56a135eb98de887b54 329 SUPERFAMILY SSF51556 4 325 7.56E-83 T 12-10-2018 IPR032466 Metal-dependent hydrolase Vc3S01_A0893 9cb236d1a8d5ca56a135eb98de887b54 329 Gene3D G3DSA:3.20.20.140 1 326 9.3E-93 T 12-10-2018 Vc3S01_2121 b11fa999a148cfa477cb79557c000bb7 111 Gene3D G3DSA:2.30.30.40 41 111 1.6E-27 T 12-10-2018 Vc3S01_2121 b11fa999a148cfa477cb79557c000bb7 111 Pfam PF03831 PhnA domain 43 111 1.4E-26 T 12-10-2018 IPR013988 PhnA protein, C-terminal Vc3S01_2121 b11fa999a148cfa477cb79557c000bb7 111 SUPERFAMILY SSF57783 1 37 1.53E-13 T 12-10-2018 Vc3S01_2121 b11fa999a148cfa477cb79557c000bb7 111 Gene3D G3DSA:2.20.25.10 1 40 3.5E-17 T 12-10-2018 Vc3S01_2121 b11fa999a148cfa477cb79557c000bb7 111 SUPERFAMILY SSF82057 37 111 1.65E-24 T 12-10-2018 Vc3S01_2121 b11fa999a148cfa477cb79557c000bb7 111 Pfam PF08274 PhnA Zinc-Ribbon 2 30 6.5E-14 T 12-10-2018 IPR013987 PhnA protein, N-terminal Vc3S01_2121 b11fa999a148cfa477cb79557c000bb7 111 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 2 111 5.7E-41 T 12-10-2018 IPR004624 PhnA protein Vc3S01_0772 8d20177acd3d27eb22fa782cd06944df 146 Pfam PF13302 Acetyltransferase (GNAT) domain 12 117 1.3E-19 T 12-10-2018 IPR000182 GNAT domain Vc3S01_0772 8d20177acd3d27eb22fa782cd06944df 146 Gene3D G3DSA:3.40.630.30 6 138 3.9E-26 T 12-10-2018 Vc3S01_0772 8d20177acd3d27eb22fa782cd06944df 146 SUPERFAMILY SSF55729 13 123 1.71E-23 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_A1855 f264b689f9cb99d15e5e86f5d461d46c 155 Pfam PF07670 Nucleoside recognition 31 124 1.0E-6 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 Vc3S01_1288 276d2a8f18447007844e9710698f6262 308 TIGRFAM TIGR02249 integrase_gron: integron integrase 1 308 5.3E-150 T 12-10-2018 IPR011946 Integrase, integron-type GO:0003677|GO:0006310|GO:0015074 Vc3S01_1288 276d2a8f18447007844e9710698f6262 308 Gene3D G3DSA:1.10.150.130 1 82 9.9E-26 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal Vc3S01_1288 276d2a8f18447007844e9710698f6262 308 Pfam PF00589 Phage integrase family 93 293 1.0E-44 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Vc3S01_1288 276d2a8f18447007844e9710698f6262 308 SUPERFAMILY SSF56349 87 304 1.27E-47 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Vc3S01_1288 276d2a8f18447007844e9710698f6262 308 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 1 74 4.7E-21 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 Vc3S01_1288 276d2a8f18447007844e9710698f6262 308 Gene3D G3DSA:1.10.443.10 85 298 7.4E-70 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Vc3S01_p20121 1e319e61bd89138938b36397afc03864 337 Pfam PF04381 Putative exonuclease, RdgC 2 274 1.5E-39 T 12-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 Vc3S01_p10056 c0d5998d895952311eab1211a37734b5 149 Pfam PF02676 Methyltransferase TYW3 23 61 1.8E-4 T 12-10-2018 IPR003827 tRNA wybutosine-synthesizing protein MetaCyc: PWY-7286|Reactome: R-HSA-6782861 Vc3S01_0348 f84bac57289007ceb3a85102eef420b0 1151 Pfam PF07916 TraG-like protein, N-terminal region 5 467 9.7E-80 T 12-10-2018 IPR012931 TraG-like, N-terminal Vc3S01_A1256 5b70a078cf89ad56f206dad95ede32f8 299 SUPERFAMILY SSF103481 47 145 8.24E-18 T 12-10-2018 Vc3S01_A1256 5b70a078cf89ad56f206dad95ede32f8 299 SUPERFAMILY SSF103481 192 290 2.09E-14 T 12-10-2018 Vc3S01_A1256 5b70a078cf89ad56f206dad95ede32f8 299 Pfam PF00892 EamA-like transporter family 11 142 2.0E-15 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Vc3S01_A1256 5b70a078cf89ad56f206dad95ede32f8 299 Pfam PF00892 EamA-like transporter family 157 287 2.6E-10 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Vc3S01_0444 3d5a590a5df051e8c824cdbd3ef0431c 356 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 5 354 2.8E-133 T 12-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 Vc3S01_0444 3d5a590a5df051e8c824cdbd3ef0431c 356 Pfam PF03739 Predicted permease YjgP/YjgQ family 8 354 2.2E-68 T 12-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 Vc3S01_p10070 2d87eb1865be22b8df634ca3c9752b3c 540 Pfam PF00437 Type II/IV secretion system protein 180 391 1.2E-30 T 12-10-2018 IPR001482 Type II/IV secretion system protein Vc3S01_p10070 2d87eb1865be22b8df634ca3c9752b3c 540 Gene3D G3DSA:3.30.450.90 65 213 1.1E-6 T 12-10-2018 Vc3S01_p10070 2d87eb1865be22b8df634ca3c9752b3c 540 SUPERFAMILY SSF52540 79 517 2.54E-32 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_p10070 2d87eb1865be22b8df634ca3c9752b3c 540 Gene3D G3DSA:3.40.50.300 215 522 9.1E-56 T 12-10-2018 Vc3S01_A1174 e83d936acf37ec6d354a12dfc09251db 282 Gene3D G3DSA:1.20.1080.10 2 251 3.2E-62 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 Vc3S01_A1174 e83d936acf37ec6d354a12dfc09251db 282 Pfam PF01226 Formate/nitrite transporter 9 258 1.2E-57 T 12-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 Vc3S01_A1831 f4db338d78c739b6c294712ae5dc8894 121 Gene3D G3DSA:3.40.630.30 2 119 3.2E-21 T 12-10-2018 Vc3S01_A1831 f4db338d78c739b6c294712ae5dc8894 121 Pfam PF00583 Acetyltransferase (GNAT) family 11 108 1.7E-15 T 12-10-2018 IPR000182 GNAT domain Vc3S01_A1831 f4db338d78c739b6c294712ae5dc8894 121 SUPERFAMILY SSF55729 11 114 7.98E-19 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_A0864 d668ec8d001a50710f6b0062004492c2 292 SUPERFAMILY SSF103481 41 143 2.22E-11 T 12-10-2018 Vc3S01_A0864 d668ec8d001a50710f6b0062004492c2 292 Pfam PF00892 EamA-like transporter family 149 279 2.2E-16 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Vc3S01_A0864 d668ec8d001a50710f6b0062004492c2 292 Pfam PF00892 EamA-like transporter family 8 137 2.7E-13 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Vc3S01_A0864 d668ec8d001a50710f6b0062004492c2 292 SUPERFAMILY SSF103481 186 285 1.44E-14 T 12-10-2018 Vc3S01_p20164 c0b9d1e73c2c8964a36830ab6be7eeaf 101 SUPERFAMILY SSF46785 19 98 1.36E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_p20164 c0b9d1e73c2c8964a36830ab6be7eeaf 101 Gene3D G3DSA:1.10.10.10 20 101 1.4E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_p20164 c0b9d1e73c2c8964a36830ab6be7eeaf 101 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 47 5.2E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_p20164 c0b9d1e73c2c8964a36830ab6be7eeaf 101 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 57 68 5.2E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_p20164 c0b9d1e73c2c8964a36830ab6be7eeaf 101 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 57 5.2E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_p20164 c0b9d1e73c2c8964a36830ab6be7eeaf 101 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 24 80 6.5E-22 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A0064 7b22cdcb1c81af282c3d4a5eca8c133e 130 PIRSF PIRSF006092 20 125 4.3E-24 T 12-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 Vc3S01_A0064 7b22cdcb1c81af282c3d4a5eca8c133e 130 Gene3D G3DSA:3.10.50.30 43 130 2.9E-23 T 12-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 Vc3S01_A0064 7b22cdcb1c81af282c3d4a5eca8c133e 130 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 49 121 2.8E-17 T 12-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 Vc3S01_A0064 7b22cdcb1c81af282c3d4a5eca8c133e 130 Pfam PF14760 Rnk N-terminus 4 42 5.4E-7 T 12-10-2018 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain Vc3S01_A0064 7b22cdcb1c81af282c3d4a5eca8c133e 130 SUPERFAMILY SSF54534 47 123 7.72E-16 T 12-10-2018 Vc3S01_A1232 a8b93f008622a079c94bbe94430ed2ed 151 Gene3D G3DSA:2.60.40.4150 25 151 2.7E-38 T 12-10-2018 IPR038706 Type VI secretion protein SciN-like superfamily Vc3S01_A1232 a8b93f008622a079c94bbe94430ed2ed 151 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 8 146 1.3E-48 T 12-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN Vc3S01_A1232 a8b93f008622a079c94bbe94430ed2ed 151 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 15 144 3.1E-40 T 12-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN Vc3S01_1055 38822de5204f1d6b8407cd66bca59513 151 Pfam PF02391 MoaE protein 7 119 3.0E-36 T 12-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 Vc3S01_1055 38822de5204f1d6b8407cd66bca59513 151 Gene3D G3DSA:3.90.1170.40 1 149 1.6E-53 T 12-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 Vc3S01_1055 38822de5204f1d6b8407cd66bca59513 151 SUPERFAMILY SSF54690 4 149 4.45E-55 T 12-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 Vc3S01_1899 e5b2e7e69096c7e5d9bdec909440fc65 762 Gene3D G3DSA:1.10.490.40 102 179 1.4E-6 T 12-10-2018 IPR036801 Diphtheria toxin, translocation domain superfamily Vc3S01_0852 5e76319d6fffbed558964cb8b850c400 103 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 1 103 16.297 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Vc3S01_0852 5e76319d6fffbed558964cb8b850c400 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 88 101 6.4E-12 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Vc3S01_0852 5e76319d6fffbed558964cb8b850c400 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 32 48 6.4E-12 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Vc3S01_0852 5e76319d6fffbed558964cb8b850c400 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 67 83 6.4E-12 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Vc3S01_0852 5e76319d6fffbed558964cb8b850c400 103 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 16 102 4.2E-18 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Vc3S01_0852 5e76319d6fffbed558964cb8b850c400 103 Pfam PF02049 Flagellar hook-basal body complex protein FliE 18 103 3.0E-28 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Vc3S01_A0707 014e4002a3f447a0df765f993f1482b3 355 Pfam PF04865 Baseplate J-like protein 66 319 5.0E-61 T 12-10-2018 IPR006949 Baseplate protein J-like Vc3S01_A1928 348c076056474a83eab639bd13032f06 209 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 6 206 2.5E-82 T 12-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 Vc3S01_A1928 348c076056474a83eab639bd13032f06 209 Gene3D G3DSA:3.20.20.70 1 209 3.2E-75 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_A1928 348c076056474a83eab639bd13032f06 209 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 124 137 - T 12-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 Vc3S01_A1928 348c076056474a83eab639bd13032f06 209 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 36 45 - T 12-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 Vc3S01_A1928 348c076056474a83eab639bd13032f06 209 Pfam PF01081 KDPG and KHG aldolase 6 198 1.8E-78 T 12-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 Vc3S01_A1928 348c076056474a83eab639bd13032f06 209 SUPERFAMILY SSF51569 4 207 1.15E-67 T 12-10-2018 Vc3S01_1640 d3a79e481e0ba6dab861ffa38542efb2 577 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 558 577 0.0015 T 12-10-2018 IPR020008 GlyGly-CTERM domain Vc3S01_1640 d3a79e481e0ba6dab861ffa38542efb2 577 Pfam PF11949 Protein of unknown function (DUF3466) 5 198 8.6E-9 T 12-10-2018 IPR022562 Protein of unknown function DUF3466 Vc3S01_1640 d3a79e481e0ba6dab861ffa38542efb2 577 Pfam PF11949 Protein of unknown function (DUF3466) 255 577 3.1E-54 T 12-10-2018 IPR022562 Protein of unknown function DUF3466 Vc3S01_2577 425c3721b4993d4be294950391751385 490 SUPERFAMILY SSF53187 15 486 3.01E-62 T 12-10-2018 Vc3S01_2577 425c3721b4993d4be294950391751385 490 PIRSF PIRSF016599 5 489 5.9E-216 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 Vc3S01_2577 425c3721b4993d4be294950391751385 490 Gene3D G3DSA:3.40.630.10 1 250 3.4E-65 T 12-10-2018 Vc3S01_2577 425c3721b4993d4be294950391751385 490 Gene3D G3DSA:3.40.630.10 377 490 3.5E-24 T 12-10-2018 Vc3S01_2577 425c3721b4993d4be294950391751385 490 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 13 486 2.4E-181 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 Vc3S01_2577 425c3721b4993d4be294950391751385 490 Pfam PF07687 Peptidase dimerisation domain 211 296 3.2E-7 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain Vc3S01_2577 425c3721b4993d4be294950391751385 490 Pfam PF01546 Peptidase family M20/M25/M40 77 473 1.7E-20 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 Vc3S01_2577 425c3721b4993d4be294950391751385 490 PRINTS PR00934 X-His dipeptidase (M25) signature 163 181 1.2E-89 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 Vc3S01_2577 425c3721b4993d4be294950391751385 490 PRINTS PR00934 X-His dipeptidase (M25) signature 210 227 1.2E-89 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 Vc3S01_2577 425c3721b4993d4be294950391751385 490 PRINTS PR00934 X-His dipeptidase (M25) signature 255 274 1.2E-89 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 Vc3S01_2577 425c3721b4993d4be294950391751385 490 PRINTS PR00934 X-His dipeptidase (M25) signature 105 123 1.2E-89 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 Vc3S01_2577 425c3721b4993d4be294950391751385 490 PRINTS PR00934 X-His dipeptidase (M25) signature 84 103 1.2E-89 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 Vc3S01_2577 425c3721b4993d4be294950391751385 490 PRINTS PR00934 X-His dipeptidase (M25) signature 454 476 1.2E-89 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 Vc3S01_2577 425c3721b4993d4be294950391751385 490 PRINTS PR00934 X-His dipeptidase (M25) signature 139 156 1.2E-89 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 Vc3S01_2577 425c3721b4993d4be294950391751385 490 PRINTS PR00934 X-His dipeptidase (M25) signature 367 385 1.2E-89 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 Vc3S01_2577 425c3721b4993d4be294950391751385 490 PRINTS PR00934 X-His dipeptidase (M25) signature 432 448 1.2E-89 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 Vc3S01_3063 fa82293d985309def23ef4ff72a78f29 100 Gene3D G3DSA:3.10.290.10 1 79 7.1E-21 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Vc3S01_3063 fa82293d985309def23ef4ff72a78f29 100 SUPERFAMILY SSF55174 1 77 5.42E-16 T 12-10-2018 Vc3S01_2222 2a3450bafca82674a1908db130754c0a 73 ProSitePatterns PS01358 Zinc finger RanBP2-type signature. 47 66 - T 12-10-2018 IPR001876 Zinc finger, RanBP2-type Vc3S01_A1966 dc29757e0abe2dfb047ac504cdb29a98 836 Pfam PF02687 FtsX-like permease family 735 825 7.4E-10 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Vc3S01_2870 397763e548cdee7d66c3d721b08d483d 144 Pfam PF12821 Threonine/Serine exporter, ThrE 1 134 1.8E-37 T 12-10-2018 IPR024528 Threonine/Serine exporter, ThrE Vc3S01_1973 937d06d08bba810367aa619527fbc010 139 Gene3D G3DSA:3.10.450.40 74 129 1.7E-5 T 12-10-2018 Vc3S01_p20112 fcd6b92ff59eff811a059145a5178567 435 SUPERFAMILY SSF52833 254 406 9.17E-9 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Vc3S01_p20112 fcd6b92ff59eff811a059145a5178567 435 Gene3D G3DSA:3.40.30.10 248 423 2.1E-14 T 12-10-2018 Vc3S01_0443 0509a01fa6d3a8d03a32ab48f51bb996 366 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 346 2.9E-117 T 12-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 Vc3S01_0443 0509a01fa6d3a8d03a32ab48f51bb996 366 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 343 4.1E-69 T 12-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 Vc3S01_0784 566db1328f3c5b52d5b4b5957b56cfae 251 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 11 239 39.741 T 12-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 Vc3S01_0784 566db1328f3c5b52d5b4b5957b56cfae 251 Pfam PF01255 Putative undecaprenyl diphosphate synthase 18 238 7.0E-81 T 12-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 Vc3S01_0784 566db1328f3c5b52d5b4b5957b56cfae 251 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 184 201 - T 12-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 Vc3S01_0784 566db1328f3c5b52d5b4b5957b56cfae 251 Gene3D G3DSA:3.40.1180.10 1 239 4.3E-94 T 12-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 Vc3S01_0784 566db1328f3c5b52d5b4b5957b56cfae 251 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 11 238 6.5E-94 T 12-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 Vc3S01_0784 566db1328f3c5b52d5b4b5957b56cfae 251 SUPERFAMILY SSF64005 9 234 2.62E-88 T 12-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 Vc3S01_1152 e077879e0ab40778e5fc7a75e4cddf54 427 Pfam PF12704 MacB-like periplasmic core domain 20 255 1.2E-25 T 12-10-2018 IPR025857 MacB-like periplasmic core domain Vc3S01_1152 e077879e0ab40778e5fc7a75e4cddf54 427 Pfam PF02687 FtsX-like permease family 322 420 1.5E-11 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Vc3S01_1354 d320e6c8dd76a1b1e7fdb4b915d3bc24 178 Gene3D G3DSA:3.40.630.30 2 178 2.1E-39 T 12-10-2018 Vc3S01_1354 d320e6c8dd76a1b1e7fdb4b915d3bc24 178 Pfam PF13302 Acetyltransferase (GNAT) domain 8 147 2.5E-18 T 12-10-2018 IPR000182 GNAT domain Vc3S01_1354 d320e6c8dd76a1b1e7fdb4b915d3bc24 178 SUPERFAMILY SSF55729 1 171 3.17E-36 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_2358 7ae3282112a53f7ef7fb4d17a263b3a6 325 Pfam PF13182 Protein of unknown function (DUF4007) 10 322 1.2E-66 T 12-10-2018 IPR025248 Domain of unknown function DUF4007 Vc3S01_0762 12c63ea38da7659536ad00ecca2baa75 63 Pfam PF14056 Domain of unknown function (DUF4250) 9 62 5.3E-20 T 12-10-2018 IPR025346 Protein of unknown function DUF4250 Vc3S01_A0783 e7c1297640cae5d49b350298d9a60855 589 Gene3D G3DSA:2.130.10.10 51 301 4.3E-8 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Vc3S01_A0783 e7c1297640cae5d49b350298d9a60855 589 SUPERFAMILY SSF75011 71 517 1.57E-15 T 12-10-2018 Vc3S01_1723 fb01a01d837ef1620e629c8e6a6d1484 127 Pfam PF01627 Hpt domain 34 111 2.9E-9 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Vc3S01_1723 fb01a01d837ef1620e629c8e6a6d1484 127 Gene3D G3DSA:1.20.120.160 5 119 1.1E-18 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 Vc3S01_1723 fb01a01d837ef1620e629c8e6a6d1484 127 SUPERFAMILY SSF47226 10 120 5.23E-21 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 Vc3S01_A1652 af9aeb179818cbaf6ac8cf7120154bbf 1620 Pfam PF12458 ATPase involved in DNA repair 29 477 3.2E-156 T 12-10-2018 IPR020958 Domain of unknown function DUF3686 Vc3S01_A1652 af9aeb179818cbaf6ac8cf7120154bbf 1620 SUPERFAMILY SSF52540 1221 1408 3.56E-15 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A1652 af9aeb179818cbaf6ac8cf7120154bbf 1620 Pfam PF07728 AAA domain (dynein-related subfamily) 1262 1385 7.4E-7 T 12-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 Vc3S01_A1652 af9aeb179818cbaf6ac8cf7120154bbf 1620 Gene3D G3DSA:3.40.50.300 1255 1415 1.8E-13 T 12-10-2018 Vc3S01_A1652 af9aeb179818cbaf6ac8cf7120154bbf 1620 SMART SM00382 1258 1407 5.5E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_p20024 f303f01664b7cea4170983898eae4ddc 258 Gene3D G3DSA:1.10.150.20 159 247 2.2E-5 T 12-10-2018 Vc3S01_2955 bb54a5be90472f5ba3e7a0195c8ca111 120 Pfam PF11333 Protein of unknown function (DUF3135) 16 95 9.6E-34 T 12-10-2018 IPR021482 Protein of unknown function DUF3135 Vc3S01_p30007 84c07dcff6325a79fa823eb4030679bb 1230 Pfam PF05593 RHS Repeat 723 743 1.7E-5 T 12-10-2018 IPR031325 RHS repeat Vc3S01_p30007 84c07dcff6325a79fa823eb4030679bb 1230 Pfam PF05593 RHS Repeat 730 764 1.0E-5 T 12-10-2018 IPR031325 RHS repeat Vc3S01_p30007 84c07dcff6325a79fa823eb4030679bb 1230 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 720 749 6.0E-5 T 12-10-2018 IPR006530 YD repeat Vc3S01_p30007 84c07dcff6325a79fa823eb4030679bb 1230 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1116 1147 0.0022 T 12-10-2018 IPR006530 YD repeat Vc3S01_A0186 cb5bd3ae1eccf663945ecee181efe80f 172 SUPERFAMILY SSF55729 6 170 4.29E-36 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_A0186 cb5bd3ae1eccf663945ecee181efe80f 172 Pfam PF13302 Acetyltransferase (GNAT) domain 10 147 7.4E-24 T 12-10-2018 IPR000182 GNAT domain Vc3S01_A0186 cb5bd3ae1eccf663945ecee181efe80f 172 Gene3D G3DSA:3.40.630.30 2 160 5.6E-34 T 12-10-2018 Vc3S01_1729 c2ad1e1ce0fa8136547e7dbdf9484f95 461 Pfam PF04932 O-Antigen ligase 241 377 1.1E-16 T 12-10-2018 IPR007016 O-antigen ligase-related Vc3S01_A1482 265eb07105c2689d89b382ffd44930c0 78 Pfam PF11137 Protein of unknown function (DUF2909) 7 71 8.1E-22 T 12-10-2018 IPR021313 Protein of unknown function DUF2909 Vc3S01_0773 225a554ce033ac814d7b525a1dde6ab6 99 Pfam PF11743 Protein of unknown function (DUF3301) 6 96 2.6E-29 T 12-10-2018 IPR021732 Protein of unknown function DUF3301 Vc3S01_1241 06392ad8ac2b0f3750d3ad97f9f7f513 345 Gene3D G3DSA:1.20.1420.20 30 345 4.3E-74 T 12-10-2018 IPR038352 Imelysin-like domain superfamily Vc3S01_1241 06392ad8ac2b0f3750d3ad97f9f7f513 345 Pfam PF09375 Imelysin 47 324 2.3E-41 T 12-10-2018 IPR018976 Imelysin-like domain Vc3S01_A0870 0e491c2b8fca322ad8a27cfaddc1018e 298 ProSitePatterns PS01062 Hydroxymethylglutaryl-coenzyme A lyase active site. 232 241 - T 12-10-2018 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site GO:0004419 KEGG: 00072+4.1.3.4|KEGG: 00280+4.1.3.4|KEGG: 00281+4.1.3.4|KEGG: 00650+4.1.3.4|MetaCyc: PWY-5074|Reactome: R-HSA-77111|Reactome: R-HSA-9033241 Vc3S01_A0870 0e491c2b8fca322ad8a27cfaddc1018e 298 Gene3D G3DSA:3.20.20.70 1 298 2.9E-128 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_A0870 0e491c2b8fca322ad8a27cfaddc1018e 298 Pfam PF00682 HMGL-like 6 276 1.2E-51 T 12-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 Vc3S01_A0870 0e491c2b8fca322ad8a27cfaddc1018e 298 SUPERFAMILY SSF51569 2 293 1.22E-72 T 12-10-2018 Vc3S01_0124 141385bb7cd70573f02bface72787273 322 PIRSF PIRSF003097 24 318 8.7E-62 T 12-10-2018 IPR004513 Cell division protein FtsX GO:0016021 Vc3S01_A0333 8e47189e8d6ab935cb522163b6dd7b87 87 Pfam PF11216 Protein of unknown function (DUF3012) 56 87 1.3E-20 T 12-10-2018 IPR021379 Protein of unknown function DUF3012 Vc3S01_A0333 8e47189e8d6ab935cb522163b6dd7b87 87 Pfam PF11216 Protein of unknown function (DUF3012) 21 52 6.2E-19 T 12-10-2018 IPR021379 Protein of unknown function DUF3012 Vc3S01_1013 bc506bc0c16f6caca6fcc8541ab84fc8 338 SUPERFAMILY SSF52540 10 316 1.19E-40 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_1013 bc506bc0c16f6caca6fcc8541ab84fc8 338 Gene3D G3DSA:3.40.50.300 121 337 2.3E-62 T 12-10-2018 Vc3S01_1013 bc506bc0c16f6caca6fcc8541ab84fc8 338 Pfam PF00437 Type II/IV secretion system protein 20 313 2.6E-52 T 12-10-2018 IPR001482 Type II/IV secretion system protein Vc3S01_1013 bc506bc0c16f6caca6fcc8541ab84fc8 338 TIGRFAM TIGR02788 VirB11: P-type DNA transfer ATPase VirB11 22 323 7.3E-101 T 12-10-2018 IPR014155 Type IV secretion system protein VirB11 GO:0043684|GO:0044097 Vc3S01_1013 bc506bc0c16f6caca6fcc8541ab84fc8 338 Gene3D G3DSA:3.30.450.90 13 120 3.4E-30 T 12-10-2018 Vc3S01_A0775 fee28fad1a15a936a5f76db97bee6416 300 SUPERFAMILY SSF103481 48 142 7.06E-7 T 12-10-2018 Vc3S01_A0775 fee28fad1a15a936a5f76db97bee6416 300 Pfam PF00892 EamA-like transporter family 10 139 2.9E-6 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Vc3S01_A0775 fee28fad1a15a936a5f76db97bee6416 300 Pfam PF00892 EamA-like transporter family 160 287 1.9E-12 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Vc3S01_A0775 fee28fad1a15a936a5f76db97bee6416 300 SUPERFAMILY SSF103481 194 290 7.85E-8 T 12-10-2018 Vc3S01_2603 d6aa8c199e5edd1eea103363b069cd28 680 Pfam PF13515 Fusaric acid resistance protein-like 376 496 2.4E-16 T 12-10-2018 Vc3S01_2603 d6aa8c199e5edd1eea103363b069cd28 680 Pfam PF12805 FUSC-like inner membrane protein yccS 71 329 1.4E-18 T 12-10-2018 IPR032692 Integral membrane protein YccS, N-terminal Vc3S01_A0979 d6383ceaf6e2f55ed047560098b943fb 273 Pfam PF00561 alpha/beta hydrolase fold 27 124 1.2E-10 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Vc3S01_A0979 d6383ceaf6e2f55ed047560098b943fb 273 Gene3D G3DSA:3.40.50.1820 18 269 3.3E-25 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_A0979 d6383ceaf6e2f55ed047560098b943fb 273 SUPERFAMILY SSF53474 4 268 5.1E-24 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_A0356 88f3b82eea2bb8ef51200f240a1510a7 445 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 2 100 9.0E-16 T 12-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 Vc3S01_A0356 88f3b82eea2bb8ef51200f240a1510a7 445 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 216 439 9.8E-51 T 12-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 Vc3S01_0889 33bece3121248c7b3ff14f12718ebbbb 259 Pfam PF04333 MlaA lipoprotein 41 233 4.8E-62 T 12-10-2018 IPR007428 MlaA lipoprotein GO:0016020 Vc3S01_0889 33bece3121248c7b3ff14f12718ebbbb 259 PRINTS PR01805 VacJ lipoprotein signature 149 166 1.9E-29 T 12-10-2018 IPR007428 MlaA lipoprotein GO:0016020 Vc3S01_0889 33bece3121248c7b3ff14f12718ebbbb 259 PRINTS PR01805 VacJ lipoprotein signature 43 56 1.9E-29 T 12-10-2018 IPR007428 MlaA lipoprotein GO:0016020 Vc3S01_0889 33bece3121248c7b3ff14f12718ebbbb 259 PRINTS PR01805 VacJ lipoprotein signature 61 77 1.9E-29 T 12-10-2018 IPR007428 MlaA lipoprotein GO:0016020 Vc3S01_0889 33bece3121248c7b3ff14f12718ebbbb 259 PRINTS PR01805 VacJ lipoprotein signature 112 129 1.9E-29 T 12-10-2018 IPR007428 MlaA lipoprotein GO:0016020 Vc3S01_0737 492950486bbbe08ae73e5f28a55e194b 268 SUPERFAMILY SSF111364 30 268 3.14E-82 T 12-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 Vc3S01_0737 492950486bbbe08ae73e5f28a55e194b 268 Gene3D G3DSA:2.40.230.20 23 268 2.2E-80 T 12-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 Vc3S01_0737 492950486bbbe08ae73e5f28a55e194b 268 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 30 268 9.0E-98 T 12-10-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 Vc3S01_A0991 22cabc6e9a994e9a9ddf300c20fbc5fb 159 Gene3D G3DSA:3.40.50.300 2 156 1.4E-22 T 12-10-2018 Vc3S01_A0991 22cabc6e9a994e9a9ddf300c20fbc5fb 159 Pfam PF13671 AAA domain 6 144 1.0E-20 T 12-10-2018 Vc3S01_A0991 22cabc6e9a994e9a9ddf300c20fbc5fb 159 SUPERFAMILY SSF52540 1 149 4.91E-21 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_p30120 cdd1d44c51024d15040d3381090ce847 78 Gene3D G3DSA:1.10.10.60 6 76 6.9E-8 T 12-10-2018 Vc3S01_p30120 cdd1d44c51024d15040d3381090ce847 78 SUPERFAMILY SSF46689 12 74 5.73E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_p30120 cdd1d44c51024d15040d3381090ce847 78 Pfam PF02954 Bacterial regulatory protein, Fis family 44 67 6.1E-5 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Vc3S01_3048 ca79685db126cb7a27719c4ea0b22d2d 194 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 3 194 44.456 T 12-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 Vc3S01_3048 ca79685db126cb7a27719c4ea0b22d2d 194 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 4 194 1.1E-95 T 12-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 Vc3S01_3048 ca79685db126cb7a27719c4ea0b22d2d 194 Pfam PF01521 Iron-sulphur cluster biosynthesis 3 100 1.3E-11 T 12-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 Vc3S01_3048 ca79685db126cb7a27719c4ea0b22d2d 194 SUPERFAMILY SSF117916 97 187 8.5E-23 T 12-10-2018 IPR034904 Fe-S cluster assembly domain superfamily Vc3S01_3048 ca79685db126cb7a27719c4ea0b22d2d 194 Gene3D G3DSA:2.60.300.12 2 100 1.2E-13 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Vc3S01_3048 ca79685db126cb7a27719c4ea0b22d2d 194 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 121 180 2.0E-26 T 12-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 Vc3S01_3048 ca79685db126cb7a27719c4ea0b22d2d 194 SUPERFAMILY SSF89360 3 99 2.35E-22 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Vc3S01_3048 ca79685db126cb7a27719c4ea0b22d2d 194 Pfam PF01106 NifU-like domain 113 180 3.2E-19 T 12-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 Vc3S01_3048 ca79685db126cb7a27719c4ea0b22d2d 194 Gene3D G3DSA:3.30.300.130 103 191 3.0E-19 T 12-10-2018 IPR034904 Fe-S cluster assembly domain superfamily Vc3S01_A0686 16f2226b825c2df60fa855be3278f750 520 Gene3D G3DSA:3.30.420.240 285 472 1.1E-10 T 12-10-2018 Vc3S01_A0686 16f2226b825c2df60fa855be3278f750 520 PIRSF PIRSF007056 1 516 4.9E-235 T 12-10-2018 IPR012036 Bacteriophage Mu, Gp28 Vc3S01_A0686 16f2226b825c2df60fa855be3278f750 520 Gene3D G3DSA:3.40.50.300 8 194 4.6E-32 T 12-10-2018 Vc3S01_A0686 16f2226b825c2df60fa855be3278f750 520 Pfam PF03237 Terminase-like family 30 261 1.2E-5 T 12-10-2018 IPR004921 Terminase large subunit, T4likevirus-type Vc3S01_1784 47387155c9034556a0c18942faedcb57 202 SMART SM00471 32 167 2.9E-7 T 12-10-2018 IPR003607 HD/PDEase domain Vc3S01_1784 47387155c9034556a0c18942faedcb57 202 SUPERFAMILY SSF109604 32 198 8.77E-32 T 12-10-2018 Vc3S01_1784 47387155c9034556a0c18942faedcb57 202 Gene3D G3DSA:1.10.3210.10 3 200 3.6E-54 T 12-10-2018 Vc3S01_1784 47387155c9034556a0c18942faedcb57 202 Pfam PF13487 HD domain 88 149 2.5E-15 T 12-10-2018 Vc3S01_3059 ab676237eb0939ad2684823717fa786f 406 Gene3D G3DSA:1.20.81.30 258 369 2.1E-25 T 12-10-2018 Vc3S01_3059 ab676237eb0939ad2684823717fa786f 406 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 166 194 - T 12-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 Vc3S01_3059 ab676237eb0939ad2684823717fa786f 406 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 403 1.5E-153 T 12-10-2018 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 Vc3S01_3059 ab676237eb0939ad2684823717fa786f 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 4.1E-37 T 12-10-2018 IPR003004 GspF/PilC family Vc3S01_3059 ab676237eb0939ad2684823717fa786f 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 166 194 4.1E-37 T 12-10-2018 IPR003004 GspF/PilC family Vc3S01_3059 ab676237eb0939ad2684823717fa786f 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 385 404 4.1E-37 T 12-10-2018 IPR003004 GspF/PilC family Vc3S01_3059 ab676237eb0939ad2684823717fa786f 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 369 383 4.1E-37 T 12-10-2018 IPR003004 GspF/PilC family Vc3S01_3059 ab676237eb0939ad2684823717fa786f 406 Pfam PF00482 Type II secretion system (T2SS), protein F 274 396 1.1E-24 T 12-10-2018 IPR018076 Type II secretion system F domain Vc3S01_3059 ab676237eb0939ad2684823717fa786f 406 Pfam PF00482 Type II secretion system (T2SS), protein F 72 194 2.4E-34 T 12-10-2018 IPR018076 Type II secretion system F domain Vc3S01_3059 ab676237eb0939ad2684823717fa786f 406 Gene3D G3DSA:1.20.81.30 56 173 2.2E-37 T 12-10-2018 Vc3S01_0548 938c1a56a42b9297d53b087508a86ca2 201 SUPERFAMILY SSF53955 17 160 1.31E-21 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily Vc3S01_0548 938c1a56a42b9297d53b087508a86ca2 201 Gene3D G3DSA:1.10.530.10 36 195 3.7E-14 T 12-10-2018 Vc3S01_A1507 98d11f8a8234b502a82b4cf832b12128 454 Pfam PF07670 Nucleoside recognition 140 233 2.1E-7 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 Vc3S01_A1653 097b53705f4313591926e51598805c61 695 Gene3D G3DSA:3.30.479.30 85 191 2.5E-9 T 12-10-2018 Vc3S01_A1653 097b53705f4313591926e51598805c61 695 SUPERFAMILY SSF117892 56 190 1.24E-10 T 12-10-2018 IPR036013 Band 7/SPFH domain superfamily Vc3S01_1371 23051c4c510d400cd3a70fa11bdfe9b8 265 SUPERFAMILY SSF51735 14 264 1.15E-7 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Vc3S01_1371 23051c4c510d400cd3a70fa11bdfe9b8 265 Gene3D G3DSA:3.40.50.720 4 227 2.1E-9 T 12-10-2018 Vc3S01_A1276 0158a9f96247a78cd34a4e6bc2bb5a97 179 Pfam PF13689 Domain of unknown function (DUF4154) 34 170 1.8E-22 T 12-10-2018 IPR025293 YfiR-like Vc3S01_1992 96e3e0a19711243ec8767c63518ee3b2 225 Pfam PF09335 SNARE associated Golgi protein 62 178 1.6E-24 T 12-10-2018 IPR032816 SNARE associated Golgi protein Vc3S01_A1947 bd42de5f3130976b667b4d11e4bcf7ae 215 SUPERFAMILY SSF46689 2 67 1.59E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_A1947 bd42de5f3130976b667b4d11e4bcf7ae 215 Gene3D G3DSA:1.10.10.10 1 62 5.6E-13 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A1947 bd42de5f3130976b667b4d11e4bcf7ae 215 SUPERFAMILY SSF53697 64 205 1.34E-18 T 12-10-2018 Vc3S01_A1947 bd42de5f3130976b667b4d11e4bcf7ae 215 Gene3D G3DSA:3.40.50.10490 63 214 8.9E-16 T 12-10-2018 Vc3S01_A1947 bd42de5f3130976b667b4d11e4bcf7ae 215 Pfam PF01418 Helix-turn-helix domain, rpiR family 8 66 2.5E-10 T 12-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 Vc3S01_A0787 feb402678b9d80bc8a910f334ecf3d2c 229 Pfam PF11769 Protein of unknown function (DUF3313) 22 219 2.8E-44 T 12-10-2018 IPR021747 Protein of unknown function DUF3313 Vc3S01_p30098 2f6250d972f0aa44c13dbc56348e913f 776 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 165 349 3.4E-21 T 12-10-2018 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 Vc3S01_p30098 2f6250d972f0aa44c13dbc56348e913f 776 SUPERFAMILY SSF52540 371 724 6.9E-26 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A1209 868704c1ecfcd2f42def3ca00a2ae945 126 SUPERFAMILY SSF54403 42 112 8.26E-15 T 12-10-2018 Vc3S01_A1209 868704c1ecfcd2f42def3ca00a2ae945 126 Pfam PF00031 Cystatin domain 50 110 2.7E-6 T 12-10-2018 IPR000010 Cystatin domain GO:0004869 Vc3S01_A1209 868704c1ecfcd2f42def3ca00a2ae945 126 Gene3D G3DSA:3.10.450.10 35 119 7.9E-9 T 12-10-2018 Vc3S01_A1114 7e575fca23419bac515e165856c3236f 293 Pfam PF11060 Protein of unknown function (DUF2861) 22 288 3.1E-91 T 12-10-2018 IPR021290 Protein of unknown function DUF2861 Vc3S01_A1089 5afe562aeb3b9185c63b50bb8874ccea 200 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 23 33 - T 12-10-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 Vc3S01_A1089 5afe562aeb3b9185c63b50bb8874ccea 200 Gene3D G3DSA:3.40.50.1110 20 200 1.6E-63 T 12-10-2018 IPR036514 SGNH hydrolase superfamily Vc3S01_A1089 5afe562aeb3b9185c63b50bb8874ccea 200 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 25 183 1.5E-21 T 12-10-2018 IPR013830 SGNH hydrolase-type esterase domain Vc3S01_A1089 5afe562aeb3b9185c63b50bb8874ccea 200 SUPERFAMILY SSF52266 22 199 1.51E-50 T 12-10-2018 Vc3S01_2481 f0d05c0c0ab7099886be91bdc5afda1f 212 PIRSF PIRSF028688 1 212 7.2E-118 T 12-10-2018 IPR014549 Flagellar protein FlgO Vc3S01_2236 ebfac55b222f8897c0fd8499c2deff7b 741 SUPERFAMILY SSF53659 5 740 0.0 T 12-10-2018 Vc3S01_2236 ebfac55b222f8897c0fd8499c2deff7b 741 Pfam PF03971 Monomeric isocitrate dehydrogenase 7 740 0.0 T 12-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 Vc3S01_2236 ebfac55b222f8897c0fd8499c2deff7b 741 PIRSF PIRSF009407 1 741 0.0 T 12-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 Vc3S01_2236 ebfac55b222f8897c0fd8499c2deff7b 741 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 1 740 0.0 T 12-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 Vc3S01_2236 ebfac55b222f8897c0fd8499c2deff7b 741 Gene3D G3DSA:3.40.718.10 414 654 4.9E-9 T 12-10-2018 Vc3S01_A1086 d5da25324f236b39e55a94f6d9b9b456 551 SUPERFAMILY SSF52540 227 410 4.41E-6 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A1086 d5da25324f236b39e55a94f6d9b9b456 551 Pfam PF09818 Predicted ATPase of the ABC class 1 438 7.0E-186 T 12-10-2018 IPR019195 ABC transporter, ATPase, putative Vc3S01_2257 488968f2a3971b53069d65e85b3b0b07 423 Pfam PF04285 Protein of unknown function (DUF444) 3 421 6.3E-188 T 12-10-2018 IPR006698 Uncharacterised protein family UPF0229 Vc3S01_2257 488968f2a3971b53069d65e85b3b0b07 423 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 423 40.479 T 12-10-2018 IPR006698 Uncharacterised protein family UPF0229 Vc3S01_A0832 0aafee4c79550999e1cddc04473d8ef8 411 SUPERFAMILY SSF53850 43 399 1.49E-87 T 12-10-2018 Vc3S01_A0832 0aafee4c79550999e1cddc04473d8ef8 411 Pfam PF13416 Bacterial extracellular solute-binding protein 45 347 2.3E-52 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein Vc3S01_A0832 0aafee4c79550999e1cddc04473d8ef8 411 Gene3D G3DSA:3.40.190.10 137 394 5.3E-111 T 12-10-2018 Vc3S01_A0832 0aafee4c79550999e1cddc04473d8ef8 411 Gene3D G3DSA:3.40.190.10 49 361 5.3E-111 T 12-10-2018 Vc3S01_A0832 0aafee4c79550999e1cddc04473d8ef8 411 PRINTS PR00181 Maltose binding protein signature 361 380 5.6E-7 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 Vc3S01_A0832 0aafee4c79550999e1cddc04473d8ef8 411 PRINTS PR00181 Maltose binding protein signature 68 86 5.6E-7 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 Vc3S01_A0832 0aafee4c79550999e1cddc04473d8ef8 411 PRINTS PR00181 Maltose binding protein signature 128 147 5.6E-7 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 Vc3S01_A0832 0aafee4c79550999e1cddc04473d8ef8 411 PRINTS PR00181 Maltose binding protein signature 149 168 5.6E-7 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 Vc3S01_A0732 cc0f5d064d16becbde2bb86ef52e341b 115 PIRSF PIRSF028226 1 115 3.1E-56 T 12-10-2018 IPR014176 Phasin, subfamily 3 Vc3S01_A0732 cc0f5d064d16becbde2bb86ef52e341b 115 Pfam PF09361 Phasin protein 8 108 7.7E-20 T 12-10-2018 IPR018968 Phasin Vc3S01_A0732 cc0f5d064d16becbde2bb86ef52e341b 115 TIGRFAM TIGR02809 phasin_3: phasin family protein 4 113 2.7E-55 T 12-10-2018 IPR014176 Phasin, subfamily 3 Vc3S01_A1695 043f157f63a2a6af8adef8f4a104922d 298 Pfam PF00482 Type II secretion system (T2SS), protein F 159 287 5.7E-10 T 12-10-2018 IPR018076 Type II secretion system F domain Vc3S01_1017 fa9177eab6f5bfaa301a854f356eda15 251 SUPERFAMILY SSF54427 107 247 2.67E-31 T 12-10-2018 IPR032710 NTF2-like domain superfamily Vc3S01_1017 fa9177eab6f5bfaa301a854f356eda15 251 Pfam PF04335 VirB8 protein 36 247 2.9E-40 T 12-10-2018 IPR007430 Bacterial virulence protein VirB8 GO:0016020 Vc3S01_1017 fa9177eab6f5bfaa301a854f356eda15 251 Gene3D G3DSA:3.10.450.230 104 251 1.7E-39 T 12-10-2018 Vc3S01_1017 fa9177eab6f5bfaa301a854f356eda15 251 PIRSF PIRSF003299 21 250 3.7E-47 T 12-10-2018 IPR026264 Type IV secretion system protein VirB8/PtlE GO:0030255 Vc3S01_1299 7ab92579581971069b3f2c1ad1b7636f 195 SUPERFAMILY SSF55729 47 190 3.54E-20 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_1299 7ab92579581971069b3f2c1ad1b7636f 195 Gene3D G3DSA:3.40.630.30 44 194 2.8E-18 T 12-10-2018 Vc3S01_1299 7ab92579581971069b3f2c1ad1b7636f 195 Pfam PF13673 Acetyltransferase (GNAT) domain 93 192 2.3E-24 T 12-10-2018 IPR000182 GNAT domain Vc3S01_1299 7ab92579581971069b3f2c1ad1b7636f 195 Pfam PF11665 Protein of unknown function (DUF3265) 10 37 1.8E-6 T 12-10-2018 IPR021681 Protein of unknown function DUF3265 Vc3S01_A0328 5b5cc45d8e21d90829d5744e82be2d7e 346 SUPERFAMILY SSF64518 61 305 5.62E-6 T 12-10-2018 Vc3S01_A0552 8c18561fa021912d7deaf8cd3ce61b2c 368 Pfam PF01553 Acyltransferase 92 202 6.8E-9 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Vc3S01_A0552 8c18561fa021912d7deaf8cd3ce61b2c 368 SUPERFAMILY SSF69593 83 317 2.75E-10 T 12-10-2018 Vc3S01_2349 e39eed3f664565c80b3c2c1804bfd39c 298 Pfam PF04143 Sulphur transport 37 292 7.6E-19 T 12-10-2018 IPR007272 Sulphur transport domain Vc3S01_0370 036526614fa2542692215e18c07342f1 415 Pfam PF00999 Sodium/hydrogen exchanger family 12 390 5.4E-55 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 Vc3S01_p30040 eabb3c96c9ee1edf1004fa87d78e1745 1017 Pfam PF01526 Tn3 transposase DDE domain 595 987 3.1E-80 T 12-10-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 Vc3S01_p30040 eabb3c96c9ee1edf1004fa87d78e1745 1017 Pfam PF13700 Domain of unknown function (DUF4158) 9 175 1.4E-22 T 12-10-2018 IPR025296 Domain of unknown function DUF4158 Vc3S01_1068 62ba7402c60db1e259016d774c1d4709 264 Pfam PF00005 ABC transporter 22 177 5.7E-24 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_1068 62ba7402c60db1e259016d774c1d4709 264 SUPERFAMILY SSF52540 2 231 2.92E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_1068 62ba7402c60db1e259016d774c1d4709 264 SMART SM00382 31 226 2.5E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_1068 62ba7402c60db1e259016d774c1d4709 264 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Vc3S01_1068 62ba7402c60db1e259016d774c1d4709 264 Gene3D G3DSA:3.40.50.300 1 255 6.9E-53 T 12-10-2018 Vc3S01_0866 a5dbabf921b1f7bc6dc8eda17c60e2b1 260 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 12 255 1.2E-74 T 12-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 Vc3S01_0866 a5dbabf921b1f7bc6dc8eda17c60e2b1 260 Pfam PF01311 Bacterial export proteins, family 1 13 243 5.8E-57 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Vc3S01_0866 a5dbabf921b1f7bc6dc8eda17c60e2b1 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 81 100 4.6E-16 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Vc3S01_0866 a5dbabf921b1f7bc6dc8eda17c60e2b1 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 4.6E-16 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Vc3S01_0866 a5dbabf921b1f7bc6dc8eda17c60e2b1 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 203 222 4.6E-16 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Vc3S01_0866 a5dbabf921b1f7bc6dc8eda17c60e2b1 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 181 203 4.6E-16 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Vc3S01_0337 5128e7f46c1c7d38245fe317848a7eee 246 Pfam PF02387 IncFII RepA protein family 3 233 3.4E-42 T 12-10-2018 IPR003446 Plasmid replication initiation, RepA GO:0006276 Vc3S01_2824 687605767d584d50362c0fcfa9a364e5 203 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 193 19.003 T 12-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Vc3S01_2824 687605767d584d50362c0fcfa9a364e5 203 Pfam PF02660 Glycerol-3-phosphate acyltransferase 12 184 4.8E-50 T 12-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Vc3S01_2824 687605767d584d50362c0fcfa9a364e5 203 SMART SM01207 10 185 5.9E-84 T 12-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Vc3S01_2824 687605767d584d50362c0fcfa9a364e5 203 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 2 194 6.0E-74 T 12-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Vc3S01_2553 d9c4a89dfaa792c0e4861bb826375ff3 132 Pfam PF04241 Protein of unknown function (DUF423) 20 110 6.0E-29 T 12-10-2018 IPR006696 Protein of unknown function DUF423 Vc3S01_A0297 d8731709e059ca59a1d7b12d452d053e 303 Pfam PF04393 Protein of unknown function (DUF535) 27 298 9.3E-80 T 12-10-2018 IPR007488 Protein of unknown function DUF535 Vc3S01_A1197 3bc2274c6687a545f18367200a807f99 510 Pfam PF03606 C4-dicarboxylate anaerobic carrier 20 505 6.5E-137 T 12-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 Vc3S01_A0600 fadd5b73b819b82f62d0313f2708925b 405 SUPERFAMILY SSF52266 226 313 1.03E-7 T 12-10-2018 Vc3S01_p30138 7a595c84fb9b89a2fa9e9363826ffa8c 773 Pfam PF16967 E-set like domain 261 325 2.0E-11 T 12-10-2018 IPR032636 Pilus assembly protein, E-set like domain Vc3S01_A1123 17c65b013e0d7d386dc58c7e76cd0893 145 SUPERFAMILY SSF158675 1 145 1.96E-52 T 12-10-2018 IPR023132 Sama2622-like superfamily Vc3S01_A1123 17c65b013e0d7d386dc58c7e76cd0893 145 Pfam PF11269 Protein of unknown function (DUF3069) 24 143 1.0E-52 T 12-10-2018 IPR021422 Protein of unknown function DUF3069 Vc3S01_A1795 1bb4c5cc68bd3015e7256b4a8b7e3a6e 47 Pfam PF08031 Berberine and berberine like 20 40 3.8E-6 T 12-10-2018 IPR012951 Berberine/berberine-like GO:0016491|GO:0050660|GO:0055114 Vc3S01_0351 c883b2691c014c79b39cb7efff290678 926 Pfam PF06986 Type-1V conjugative transfer system mating pair stabilisation 468 617 1.8E-14 T 12-10-2018 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN Vc3S01_0351 c883b2691c014c79b39cb7efff290678 926 Pfam PF06986 Type-1V conjugative transfer system mating pair stabilisation 765 839 3.6E-26 T 12-10-2018 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN Vc3S01_0351 c883b2691c014c79b39cb7efff290678 926 Gene3D G3DSA:3.40.50.410 218 371 1.2E-12 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Vc3S01_0351 c883b2691c014c79b39cb7efff290678 926 SMART SM00327 221 383 1.2E-4 T 12-10-2018 IPR002035 von Willebrand factor, type A Vc3S01_0351 c883b2691c014c79b39cb7efff290678 926 SUPERFAMILY SSF53300 220 358 5.34E-16 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Vc3S01_0351 c883b2691c014c79b39cb7efff290678 926 Pfam PF00092 von Willebrand factor type A domain 223 353 3.1E-5 T 12-10-2018 IPR002035 von Willebrand factor, type A Vc3S01_2145 47e6792f43e98b83b664c725dcec05c2 153 Pfam PF07321 Type III secretion protein YscO 2 149 3.7E-35 T 12-10-2018 IPR009929 Type III secretion sytem,YscO Vc3S01_2605 152b13ad4bcd215bdce7b76c634a37b0 455 Pfam PF03553 Na+/H+ antiporter family 19 222 3.7E-14 T 12-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 Vc3S01_1977 e8a2daf4c3b025125e12d63e4caa670f 248 Pfam PF00535 Glycosyl transferase family 2 9 118 3.8E-25 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Vc3S01_1977 e8a2daf4c3b025125e12d63e4caa670f 248 Gene3D G3DSA:3.90.550.10 1 204 6.8E-40 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Vc3S01_1977 e8a2daf4c3b025125e12d63e4caa670f 248 SUPERFAMILY SSF53448 5 227 8.84E-43 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Vc3S01_A1491 3f092597e367f8af4149628102bd624c 225 Pfam PF03591 AzlC protein 3 141 4.7E-35 T 12-10-2018 IPR011606 Branched-chain amino acid transport, permease Vc3S01_A0687 32da2572c89c2ba8571fa9f064a85b24 520 Pfam PF06074 Protein of unknown function (DUF935) 5 517 1.9E-174 T 12-10-2018 IPR009279 Protein of unknown function DUF935 Vc3S01_2181 df67566ae43bc367318242ef627f4a82 189 Pfam PF06693 Protein of unknown function (DUF1190) 41 184 8.6E-28 T 12-10-2018 IPR009576 Biofilm formation YgiB Vc3S01_A1534 5eeeb947f25237fe48437e2f818afaf5 314 Gene3D G3DSA:3.40.1190.20 4 312 7.5E-68 T 12-10-2018 IPR029056 Ribokinase-like Vc3S01_A1534 5eeeb947f25237fe48437e2f818afaf5 314 Pfam PF00294 pfkB family carbohydrate kinase 7 307 1.8E-49 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB Vc3S01_A1534 5eeeb947f25237fe48437e2f818afaf5 314 SUPERFAMILY SSF53613 6 305 2.03E-64 T 12-10-2018 IPR029056 Ribokinase-like Vc3S01_A1534 5eeeb947f25237fe48437e2f818afaf5 314 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 260 273 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 Vc3S01_A0564 9ebc49dee9daad487c28911bc69ad2f2 455 SUPERFAMILY SSF102114 58 438 1.57E-83 T 12-10-2018 Vc3S01_A0564 9ebc49dee9daad487c28911bc69ad2f2 455 SMART SM00729 61 284 6.6E-41 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Vc3S01_A0564 9ebc49dee9daad487c28911bc69ad2f2 455 Gene3D G3DSA:3.80.30.20 37 363 1.5E-74 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Vc3S01_A0564 9ebc49dee9daad487c28911bc69ad2f2 455 Pfam PF04055 Radical SAM superfamily 66 236 1.5E-13 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Vc3S01_A0564 9ebc49dee9daad487c28911bc69ad2f2 455 TIGRFAM TIGR04107 rSAM_HutW: putative heme utilization radical SAM enzyme HutW 23 441 2.7E-180 T 12-10-2018 IPR026332 Putative heme utilization radical SAM enzyme HutW Vc3S01_A1705 4bda70602ee8765eaafe2b8055fe9fef 64 Pfam PF04964 Flp/Fap pilin component 7 52 1.6E-9 T 12-10-2018 IPR007047 Flp/Fap pilin component Vc3S01_2154 faf48f0b843ae4ba4f49eadd823db93a 386 Gene3D G3DSA:1.10.3290.10 74 386 2.0E-108 T 12-10-2018 IPR036597 Fido-like domain superfamily Vc3S01_A1856 80de55679c0392584d29eb7c40c118c5 246 Pfam PF07670 Nucleoside recognition 86 180 6.9E-11 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 Vc3S01_2480 b715f0ff3ea1e8c2b2dc2fddee697180 143 Pfam PF02169 LPP20 lipoprotein 20 118 5.4E-8 T 12-10-2018 IPR024952 Lipoprotein LPP20-like Vc3S01_2480 b715f0ff3ea1e8c2b2dc2fddee697180 143 PIRSF PIRSF028687 1 143 5.1E-58 T 12-10-2018 IPR007293 Flagellar protein FlgP Vc3S01_1581 7b797b04d7b8820878fc25ba061b1552 489 Pfam PF06812 ImpA, N-terminal, type VI secretion system 8 154 6.4E-21 T 12-10-2018 IPR010657 ImpA, N-terminal Vc3S01_p20156 ede49d9f876df52740865a3da0d4f227 267 Pfam PF01636 Phosphotransferase enzyme family 17 258 2.0E-29 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase Vc3S01_p20156 ede49d9f876df52740865a3da0d4f227 267 Gene3D G3DSA:3.30.200.20 8 83 3.2E-16 T 12-10-2018 Vc3S01_p20156 ede49d9f876df52740865a3da0d4f227 267 Gene3D G3DSA:3.90.1200.10 84 264 4.5E-53 T 12-10-2018 Vc3S01_p20156 ede49d9f876df52740865a3da0d4f227 267 PIRSF PIRSF000706 2 265 2.6E-80 T 12-10-2018 IPR024165 Aminoglycoside 3-phosphotransferase GO:0005524|GO:0016773|GO:0046677 Vc3S01_p20156 ede49d9f876df52740865a3da0d4f227 267 SUPERFAMILY SSF56112 6 263 2.77E-42 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily Vc3S01_p30081 c4a5c4d5fe5a14e0b87c98d177408941 245 SUPERFAMILY SSF52540 9 195 2.6E-6 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_p30081 c4a5c4d5fe5a14e0b87c98d177408941 245 Gene3D G3DSA:3.40.50.300 26 227 1.3E-5 T 12-10-2018 Vc3S01_A0764 24c104b244e97106a860cdcef891e0b7 411 Pfam PF12704 MacB-like periplasmic core domain 19 227 6.8E-15 T 12-10-2018 IPR025857 MacB-like periplasmic core domain Vc3S01_A0764 24c104b244e97106a860cdcef891e0b7 411 Pfam PF02687 FtsX-like permease family 299 403 2.0E-10 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Vc3S01_A1260 214421fdb90af8bd8dca1c40381ebd1f 454 SUPERFAMILY SSF56219 32 450 1.19E-13 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Vc3S01_A1260 214421fdb90af8bd8dca1c40381ebd1f 454 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 37 445 1.4E-25 T 12-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase Vc3S01_0425 1a4c1af3cd64a87017b20109e62ef32c 212 Pfam PF05494 MlaC protein 34 200 2.1E-45 T 12-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC Vc3S01_0425 1a4c1af3cd64a87017b20109e62ef32c 212 PIRSF PIRSF004649 1 212 1.5E-56 T 12-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC Vc3S01_0425 1a4c1af3cd64a87017b20109e62ef32c 212 Gene3D G3DSA:3.10.450.710 25 204 4.6E-38 T 12-10-2018 Vc3S01_0751 33a93e303d0defeaf98ac8a1e258089f 198 PIRSF PIRSF006102 1 198 4.2E-66 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 Vc3S01_0751 33a93e303d0defeaf98ac8a1e258089f 198 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 2 197 7.0E-108 T 12-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 Vc3S01_0751 33a93e303d0defeaf98ac8a1e258089f 198 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 196 1.3E-59 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 Vc3S01_0751 33a93e303d0defeaf98ac8a1e258089f 198 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 198 29.927 T 12-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 Vc3S01_A1901 c5bb0e7d3e8f8510d68518896f564c9f 394 Pfam PF02264 LamB porin 25 394 1.5E-99 T 12-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 Vc3S01_A1901 c5bb0e7d3e8f8510d68518896f564c9f 394 Gene3D G3DSA:2.40.170.10 23 394 2.5E-110 T 12-10-2018 IPR036998 Porin, LamB-type superfamily GO:0015288|GO:0016020|GO:0034219 Vc3S01_A1901 c5bb0e7d3e8f8510d68518896f564c9f 394 SUPERFAMILY SSF56935 23 394 3.04E-110 T 12-10-2018 Vc3S01_A1901 c5bb0e7d3e8f8510d68518896f564c9f 394 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 30 372 2.0E-146 T 12-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 Vc3S01_A0589 f53458632bc3519c91f772121f4dc099 374 Gene3D G3DSA:1.20.1250.20 1 363 1.2E-49 T 12-10-2018 Vc3S01_A0589 f53458632bc3519c91f772121f4dc099 374 SUPERFAMILY SSF103473 4 365 2.09E-57 T 12-10-2018 IPR036259 MFS transporter superfamily Vc3S01_A0589 f53458632bc3519c91f772121f4dc099 374 Pfam PF07690 Major Facilitator Superfamily 4 327 2.2E-38 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Vc3S01_A1289 409dfc378319acbcf577b6b78c4e4dec 434 Pfam PF06812 ImpA, N-terminal, type VI secretion system 9 119 2.9E-24 T 12-10-2018 IPR010657 ImpA, N-terminal Vc3S01_p40049 84474d76f592bb553f408a1c26c8f444 494 TIGRFAM TIGR03187 DGQHR: DGQHR domain 9 288 1.4E-46 T 12-10-2018 IPR017601 DGQHR-containing domain Vc3S01_p40049 84474d76f592bb553f408a1c26c8f444 494 Pfam PF14072 DNA-sulfur modification-associated 8 322 5.2E-52 T 12-10-2018 IPR017642 DNA sulphur modification protein DndB Vc3S01_A0489 f7f3ff8c995ae08e36a5c7b274fc2b1e 3765 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 2942 2979 3.4E-6 T 12-10-2018 IPR001434 Domain of unknown function DUF11 Vc3S01_A0489 f7f3ff8c995ae08e36a5c7b274fc2b1e 3765 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 2670 2708 4.2E-4 T 12-10-2018 IPR001434 Domain of unknown function DUF11 Vc3S01_A0489 f7f3ff8c995ae08e36a5c7b274fc2b1e 3765 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 2397 2433 5.7E-6 T 12-10-2018 IPR001434 Domain of unknown function DUF11 Vc3S01_A0489 f7f3ff8c995ae08e36a5c7b274fc2b1e 3765 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 610 646 2.6E-6 T 12-10-2018 IPR001434 Domain of unknown function DUF11 Vc3S01_A0489 f7f3ff8c995ae08e36a5c7b274fc2b1e 3765 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 3357 3405 3.1E-8 T 12-10-2018 IPR001434 Domain of unknown function DUF11 Vc3S01_A0489 f7f3ff8c995ae08e36a5c7b274fc2b1e 3765 Pfam PF01345 Domain of unknown function DUF11 3355 3437 1.8E-6 T 12-10-2018 IPR001434 Domain of unknown function DUF11 Vc3S01_A0489 f7f3ff8c995ae08e36a5c7b274fc2b1e 3765 Pfam PF01345 Domain of unknown function DUF11 2395 2464 2.1E-6 T 12-10-2018 IPR001434 Domain of unknown function DUF11 Vc3S01_A1300 6964776a510921795ecf61bdcc417be1 330 Pfam PF09937 Uncharacterized protein conserved in bacteria (DUF2169) 24 302 9.8E-71 T 12-10-2018 IPR018683 Domain of unknown function DUF2169 Vc3S01_1498 69da96ae7da24da4ba871b52bf49d33f 554 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 45 540 1.3E-169 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 Vc3S01_1498 69da96ae7da24da4ba871b52bf49d33f 554 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 84 540 4.6E-135 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 Vc3S01_0577 f66f36d5b63b611d1b322b3745b17320 258 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 1 257 9.3E-112 T 12-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 Vc3S01_0577 f66f36d5b63b611d1b322b3745b17320 258 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 3 248 9.4E-60 T 12-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 Vc3S01_1466 1ee16ff80ba9ccfae110c09458b2343e 165 Gene3D G3DSA:3.40.630.30 15 158 6.3E-17 T 12-10-2018 Vc3S01_1466 1ee16ff80ba9ccfae110c09458b2343e 165 Pfam PF00583 Acetyltransferase (GNAT) family 50 140 2.4E-11 T 12-10-2018 IPR000182 GNAT domain Vc3S01_1466 1ee16ff80ba9ccfae110c09458b2343e 165 SUPERFAMILY SSF55729 21 158 9.26E-20 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_1810 f68f552cd82f74bbdc20374cdaeed818 388 PIRSF PIRSF029038 53 388 1.7E-160 T 12-10-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 Vc3S01_1810 f68f552cd82f74bbdc20374cdaeed818 388 Pfam PF05971 Protein of unknown function (DUF890) 63 377 8.7E-131 T 12-10-2018 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 Vc3S01_1810 f68f552cd82f74bbdc20374cdaeed818 388 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 64 379 54.519 T 12-10-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 Vc3S01_1810 f68f552cd82f74bbdc20374cdaeed818 388 SUPERFAMILY SSF53335 102 377 5.63E-34 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Vc3S01_1810 f68f552cd82f74bbdc20374cdaeed818 388 Gene3D G3DSA:3.40.50.150 97 377 2.9E-78 T 12-10-2018 Vc3S01_A0762 1afb652d9942a271bb365e5bafd2dc58 248 Gene3D G3DSA:2.50.20.10 13 244 1.0E-58 T 12-10-2018 Vc3S01_A0762 1afb652d9942a271bb365e5bafd2dc58 248 Pfam PF17131 Outer membrane lipoprotein-sorting protein 67 244 2.7E-53 T 12-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein Vc3S01_2587 c1ec24fc259193a2c0ecf6928d601fe9 136 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Vc3S01_2587 c1ec24fc259193a2c0ecf6928d601fe9 136 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 27 2.9E-8 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Vc3S01_2587 c1ec24fc259193a2c0ecf6928d601fe9 136 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 5.9E-5 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Vc3S01_1920 58d18859bed647f5a554f4507e9aa247 244 Pfam PF02698 DUF218 domain 61 193 2.7E-21 T 12-10-2018 IPR003848 Domain of unknown function DUF218 Vc3S01_1944 760fb412d42b0f8d77151dc08ff17c37 165 SUPERFAMILY SSF52172 1 141 3.42E-19 T 12-10-2018 IPR011006 CheY-like superfamily Vc3S01_1944 760fb412d42b0f8d77151dc08ff17c37 165 Pfam PF00072 Response regulator receiver domain 6 124 5.9E-13 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_1944 760fb412d42b0f8d77151dc08ff17c37 165 Gene3D G3DSA:3.40.50.2300 3 143 7.1E-18 T 12-10-2018 Vc3S01_1944 760fb412d42b0f8d77151dc08ff17c37 165 SMART SM00448 4 125 5.7E-9 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Vc3S01_0235 7ea577ef7dea9245a484a32ce4639318 376 Pfam PF01551 Peptidase family M23 276 369 7.6E-24 T 12-10-2018 IPR016047 Peptidase M23 Vc3S01_0235 7ea577ef7dea9245a484a32ce4639318 376 Gene3D G3DSA:2.70.70.10 235 375 4.5E-34 T 12-10-2018 IPR011055 Duplicated hybrid motif Vc3S01_0235 7ea577ef7dea9245a484a32ce4639318 376 SUPERFAMILY SSF51261 142 373 3.87E-47 T 12-10-2018 IPR011055 Duplicated hybrid motif Vc3S01_A1481 1b990c60d61111bfb7873d1da99e280b 262 Pfam PF02104 SURF1 family 31 237 9.4E-20 T 12-10-2018 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_1197 01987ab86088691b0ceed69ce8aaa84d 419 SUPERFAMILY SSF118215 15 403 1.01E-109 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 Vc3S01_1197 01987ab86088691b0ceed69ce8aaa84d 419 Pfam PF00375 Sodium:dicarboxylate symporter family 15 403 7.6E-119 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Vc3S01_1197 01987ab86088691b0ceed69ce8aaa84d 419 Gene3D G3DSA:1.10.3860.10 2 419 2.0E-117 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 Vc3S01_1197 01987ab86088691b0ceed69ce8aaa84d 419 PRINTS PR00173 Glutamate-aspartate symporter signature 332 351 8.2E-53 T 12-10-2018 Vc3S01_1197 01987ab86088691b0ceed69ce8aaa84d 419 PRINTS PR00173 Glutamate-aspartate symporter signature 147 169 8.2E-53 T 12-10-2018 Vc3S01_1197 01987ab86088691b0ceed69ce8aaa84d 419 PRINTS PR00173 Glutamate-aspartate symporter signature 297 323 8.2E-53 T 12-10-2018 Vc3S01_1197 01987ab86088691b0ceed69ce8aaa84d 419 PRINTS PR00173 Glutamate-aspartate symporter signature 358 378 8.2E-53 T 12-10-2018 Vc3S01_1197 01987ab86088691b0ceed69ce8aaa84d 419 PRINTS PR00173 Glutamate-aspartate symporter signature 78 103 8.2E-53 T 12-10-2018 Vc3S01_1197 01987ab86088691b0ceed69ce8aaa84d 419 PRINTS PR00173 Glutamate-aspartate symporter signature 7 27 8.2E-53 T 12-10-2018 Vc3S01_1197 01987ab86088691b0ceed69ce8aaa84d 419 PRINTS PR00173 Glutamate-aspartate symporter signature 48 68 8.2E-53 T 12-10-2018 Vc3S01_1197 01987ab86088691b0ceed69ce8aaa84d 419 PRINTS PR00173 Glutamate-aspartate symporter signature 230 249 8.2E-53 T 12-10-2018 Vc3S01_1197 01987ab86088691b0ceed69ce8aaa84d 419 PRINTS PR00173 Glutamate-aspartate symporter signature 195 214 8.2E-53 T 12-10-2018 Vc3S01_1657 42ba9a7a6daa3210c433a912078e9f9f 158 Pfam PF05751 FixH 7 147 3.4E-43 T 12-10-2018 IPR008620 Nitrogen fixation protein FixH Vc3S01_p40011 5efb98dff3c4191cc65ba71a5dc67b4c 465 Pfam PF00263 Bacterial type II and III secretion system protein 303 444 7.4E-8 T 12-10-2018 IPR004846 Type II/III secretion system GO:0009306 Vc3S01_p40011 5efb98dff3c4191cc65ba71a5dc67b4c 465 ProDom PD128112 MEMBRANE OUTER PILUS LIPOPROTEIN BIOSYNTHESIS C TOXIN-COREGULATED TOXIN COFD TCPC 183 406 0.002 T 12-10-2018 Vc3S01_A1510 aedf06aafe8c90540f04e9c07b3f7527 385 PRINTS PR00166 Aromatic amino acid permease signature 306 324 7.8E-36 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 Vc3S01_A1510 aedf06aafe8c90540f04e9c07b3f7527 385 PRINTS PR00166 Aromatic amino acid permease signature 82 102 7.8E-36 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 Vc3S01_A1510 aedf06aafe8c90540f04e9c07b3f7527 385 PRINTS PR00166 Aromatic amino acid permease signature 182 204 7.8E-36 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 Vc3S01_A1510 aedf06aafe8c90540f04e9c07b3f7527 385 PRINTS PR00166 Aromatic amino acid permease signature 37 56 7.8E-36 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 Vc3S01_A1510 aedf06aafe8c90540f04e9c07b3f7527 385 PRINTS PR00166 Aromatic amino acid permease signature 10 33 7.8E-36 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 Vc3S01_A1510 aedf06aafe8c90540f04e9c07b3f7527 385 PRINTS PR00166 Aromatic amino acid permease signature 147 167 7.8E-36 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 Vc3S01_A1510 aedf06aafe8c90540f04e9c07b3f7527 385 PRINTS PR00166 Aromatic amino acid permease signature 327 346 7.8E-36 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 Vc3S01_A1510 aedf06aafe8c90540f04e9c07b3f7527 385 Pfam PF03222 Tryptophan/tyrosine permease family 4 381 4.2E-77 T 12-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 Vc3S01_A1317 c415fb961d4dd8d0d03abccf905edcc5 182 Gene3D G3DSA:3.40.630.30 2 169 1.4E-31 T 12-10-2018 Vc3S01_A1317 c415fb961d4dd8d0d03abccf905edcc5 182 Pfam PF00583 Acetyltransferase (GNAT) family 49 141 1.2E-14 T 12-10-2018 IPR000182 GNAT domain Vc3S01_A1317 c415fb961d4dd8d0d03abccf905edcc5 182 SUPERFAMILY SSF55729 1 151 8.78E-27 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_3100 92d1204e568ba41c5f8bcb93b37e3729 510 Pfam PF02646 RmuC family 181 477 2.4E-106 T 12-10-2018 IPR003798 DNA recombination RmuC Vc3S01_A0968 7229f6898c2f02e0821a2f1d954fa003 229 SUPERFAMILY SSF81342 51 220 1.88E-24 T 12-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 Vc3S01_A0968 7229f6898c2f02e0821a2f1d954fa003 229 Pfam PF01292 Prokaryotic cytochrome b561 55 220 2.2E-21 T 12-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 Vc3S01_0929 32720dc7783369cda907b175a306d4ed 441 Pfam PF03222 Tryptophan/tyrosine permease family 40 340 1.9E-4 T 12-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 Vc3S01_p20163 714afea1a048dbf4acb8ed3a5cfad99a 179 Pfam PF14319 Transposase zinc-binding domain 39 135 2.7E-25 T 12-10-2018 IPR026889 Transposase zinc-binding domain Vc3S01_1459 41fd7acf9628cb0bed8a9946b64e656f 160 Gene3D G3DSA:2.40.160.20 19 160 1.3E-24 T 12-10-2018 Vc3S01_1459 41fd7acf9628cb0bed8a9946b64e656f 160 SUPERFAMILY SSF56925 18 159 1.49E-20 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel Vc3S01_1459 41fd7acf9628cb0bed8a9946b64e656f 160 Pfam PF13505 Outer membrane protein beta-barrel domain 6 159 1.0E-17 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel Vc3S01_2961 98fe376d65e760be61beeb6f8df89333 526 Pfam PF06082 Exopolysaccharide biosynthesis protein YbjH 3 432 8.3E-16 T 12-10-2018 IPR010344 Exopolysaccharide biosynthesis protein YbjH Vc3S01_A0229 e3a1d624e7b890e354c46e5c4aceb14e 401 Pfam PF07690 Major Facilitator Superfamily 15 354 1.6E-45 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Vc3S01_A0229 e3a1d624e7b890e354c46e5c4aceb14e 401 Gene3D G3DSA:1.20.1720.10 10 387 8.3E-99 T 12-10-2018 Vc3S01_A0229 e3a1d624e7b890e354c46e5c4aceb14e 401 SUPERFAMILY SSF103473 9 389 4.05E-59 T 12-10-2018 IPR036259 MFS transporter superfamily Vc3S01_A0229 e3a1d624e7b890e354c46e5c4aceb14e 401 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 9 384 3.1E-62 T 12-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 Vc3S01_A0084 c004244a9e7e205bc9a6a87a87888e60 341 Pfam PF01757 Acyltransferase family 8 326 1.2E-24 T 12-10-2018 IPR002656 Acyltransferase 3 GO:0016747 Vc3S01_A0579 9a11b35673644c7495b4467d0300382b 364 SUPERFAMILY SSF103473 84 362 7.85E-6 T 12-10-2018 IPR036259 MFS transporter superfamily Vc3S01_A0579 9a11b35673644c7495b4467d0300382b 364 Pfam PF03773 Predicted permease 10 360 2.0E-62 T 12-10-2018 IPR005524 Predicted permease DUF318 Vc3S01_A0759 ead21fab4542ddbd7222095cea4ffab7 88 Pfam PF03889 Domain of unknown function 22 59 3.3E-22 T 12-10-2018 IPR005589 Alternative ribosome-rescue factor A GO:0072344 Vc3S01_1778 4cce7a58d0b8f3f738bb70887aa660c9 922 Pfam PF16967 E-set like domain 269 332 1.2E-13 T 12-10-2018 IPR032636 Pilus assembly protein, E-set like domain Vc3S01_1778 4cce7a58d0b8f3f738bb70887aa660c9 922 Pfam PF15976 CS1-pili formation C-terminal 735 822 5.3E-8 T 12-10-2018 IPR031917 Pilus assembly protein, C-terminal domain Vc3S01_A1460 bbfe7c694bca4fb29f317fff4409e51a 324 Gene3D G3DSA:3.20.20.30 1 324 3.5E-121 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Vc3S01_A1460 bbfe7c694bca4fb29f317fff4409e51a 324 PRINTS PR00089 Bacterial luciferase signature 181 196 1.4E-22 T 12-10-2018 IPR002103 Bacterial luciferase/NFP MetaCyc: PWY-7723 Vc3S01_A1460 bbfe7c694bca4fb29f317fff4409e51a 324 PRINTS PR00089 Bacterial luciferase signature 232 250 1.4E-22 T 12-10-2018 IPR002103 Bacterial luciferase/NFP MetaCyc: PWY-7723 Vc3S01_A1460 bbfe7c694bca4fb29f317fff4409e51a 324 PRINTS PR00089 Bacterial luciferase signature 214 231 1.4E-22 T 12-10-2018 IPR002103 Bacterial luciferase/NFP MetaCyc: PWY-7723 Vc3S01_A1460 bbfe7c694bca4fb29f317fff4409e51a 324 PRINTS PR00089 Bacterial luciferase signature 167 178 1.4E-22 T 12-10-2018 IPR002103 Bacterial luciferase/NFP MetaCyc: PWY-7723 Vc3S01_A1460 bbfe7c694bca4fb29f317fff4409e51a 324 PRINTS PR00089 Bacterial luciferase signature 197 212 1.4E-22 T 12-10-2018 IPR002103 Bacterial luciferase/NFP MetaCyc: PWY-7723 Vc3S01_A1460 bbfe7c694bca4fb29f317fff4409e51a 324 ProSitePatterns PS00494 Bacterial luciferase subunits signature. 187 212 - T 12-10-2018 IPR018235 Bacterial luciferase, conserved site GO:0047646|GO:0055114 MetaCyc: PWY-7723 Vc3S01_A1460 bbfe7c694bca4fb29f317fff4409e51a 324 SUPERFAMILY SSF51679 98 323 3.79E-68 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Vc3S01_A1460 bbfe7c694bca4fb29f317fff4409e51a 324 Pfam PF00296 Luciferase-like monooxygenase 1 254 8.3E-33 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Vc3S01_A1604 2fb87f122585916781e91a0464b8c4ca 329 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 74 243 2.1E-13 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Vc3S01_A1604 2fb87f122585916781e91a0464b8c4ca 329 SUPERFAMILY SSF111369 71 214 9.29E-10 T 12-10-2018 Vc3S01_A1604 2fb87f122585916781e91a0464b8c4ca 329 Gene3D G3DSA:2.40.50.100 67 202 7.6E-24 T 12-10-2018 Vc3S01_A1604 2fb87f122585916781e91a0464b8c4ca 329 Gene3D G3DSA:2.40.30.170 203 250 7.6E-24 T 12-10-2018 Vc3S01_A1604 2fb87f122585916781e91a0464b8c4ca 329 Gene3D G3DSA:1.10.287.470 97 165 7.6E-24 T 12-10-2018 Vc3S01_A1757 b9032ab65b3bfdf0b915e112cba5307d 146 Gene3D G3DSA:3.40.930.10 1 145 8.6E-32 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 Vc3S01_A1757 b9032ab65b3bfdf0b915e112cba5307d 146 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 144 1.6E-31 T 12-10-2018 IPR002178 PTS EIIA type-2 domain Vc3S01_A1757 b9032ab65b3bfdf0b915e112cba5307d 146 SUPERFAMILY SSF55804 1 144 9.42E-30 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 Vc3S01_2855 e5a2c686b4eccea3df13d113dfbe7dcc 261 Pfam PF08239 Bacterial SH3 domain 130 181 2.1E-11 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type Vc3S01_2855 e5a2c686b4eccea3df13d113dfbe7dcc 261 Gene3D G3DSA:2.30.30.40 122 185 1.4E-9 T 12-10-2018 Vc3S01_A1434 3ecc7a47f602d07aaf21921402600789 456 Pfam PF00263 Bacterial type II and III secretion system protein 250 407 1.0E-39 T 12-10-2018 IPR004846 Type II/III secretion system GO:0009306 Vc3S01_A1434 3ecc7a47f602d07aaf21921402600789 456 Pfam PF13629 Pilus formation protein N terminal region 34 99 3.9E-13 T 12-10-2018 IPR032789 Pilus formation protein, N-terminal Vc3S01_p10024 5388b645b794ee0663cb1d97627e29b9 541 Gene3D G3DSA:3.40.50.150 5 200 1.5E-16 T 12-10-2018 Vc3S01_p10024 5388b645b794ee0663cb1d97627e29b9 541 SUPERFAMILY SSF53335 59 194 1.23E-10 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Vc3S01_p10024 5388b645b794ee0663cb1d97627e29b9 541 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 75 81 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Vc3S01_A1268 a2407e10753c30ace448fa135e3c24ff 240 SUPERFAMILY SSF55469 7 236 7.85E-42 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Vc3S01_A1268 a2407e10753c30ace448fa135e3c24ff 240 Gene3D G3DSA:3.40.109.10 1 239 3.5E-46 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Vc3S01_A1268 a2407e10753c30ace448fa135e3c24ff 240 Pfam PF00881 Nitroreductase family 13 217 3.0E-28 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Vc3S01_0677 6ed2b358b8901d0f898963567da85739 172 Pfam PF07811 TadE-like protein 10 52 1.4E-7 T 12-10-2018 IPR012495 TadE-like Vc3S01_1449 73b5c0cc2a4c21d0991086ca449e6a6c 249 Gene3D G3DSA:1.10.3720.10 6 249 1.0E-55 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_1449 73b5c0cc2a4c21d0991086ca449e6a6c 249 SUPERFAMILY SSF161098 10 238 3.14E-45 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_1449 73b5c0cc2a4c21d0991086ca449e6a6c 249 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 43 238 1.1E-14 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Vc3S01_A1704 a21539ad001764e5f27c78b5f9da6f46 65 Pfam PF04964 Flp/Fap pilin component 8 52 3.2E-9 T 12-10-2018 IPR007047 Flp/Fap pilin component Vc3S01_3079 a5b47bab7b5204323ca90dd4e2325ee6 334 SUPERFAMILY SSF51556 3 325 2.35E-75 T 12-10-2018 IPR032466 Metal-dependent hydrolase Vc3S01_3079 a5b47bab7b5204323ca90dd4e2325ee6 334 Pfam PF00962 Adenosine/AMP deaminase 5 328 7.7E-90 T 12-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 Vc3S01_3079 a5b47bab7b5204323ca90dd4e2325ee6 334 Hamap MF_00540 Adenosine deaminase [add]. 1 331 54.912 T 12-10-2018 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217 Vc3S01_3079 a5b47bab7b5204323ca90dd4e2325ee6 334 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 6 330 1.2E-120 T 12-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 Vc3S01_3079 a5b47bab7b5204323ca90dd4e2325ee6 334 Gene3D G3DSA:3.20.20.140 1 334 7.8E-97 T 12-10-2018 Vc3S01_A0908 b1980eaaf40039672fbd45d1854c72f8 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 6 112 5.4E-15 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Vc3S01_A0908 b1980eaaf40039672fbd45d1854c72f8 222 SUPERFAMILY SSF161098 9 202 4.45E-31 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_A0908 b1980eaaf40039672fbd45d1854c72f8 222 Gene3D G3DSA:1.10.3720.10 3 217 7.7E-41 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_A0908 b1980eaaf40039672fbd45d1854c72f8 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 214 2.1E-13 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Vc3S01_2361 c2312d853d5b8010e188aa05572d8ce1 736 Pfam PF03235 Protein of unknown function DUF262 6 348 1.9E-22 T 12-10-2018 IPR004919 Domain of unknown function DUF262 Vc3S01_A1316 ca315bdba843ac5b5abd6d22746ec797 205 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 126 186 1.4E-9 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Vc3S01_A1316 ca315bdba843ac5b5abd6d22746ec797 205 SUPERFAMILY SSF56784 7 195 6.28E-32 T 12-10-2018 IPR036412 HAD-like superfamily Vc3S01_A1316 ca315bdba843ac5b5abd6d22746ec797 205 Pfam PF13419 Haloacid dehalogenase-like hydrolase 87 186 1.3E-9 T 12-10-2018 Vc3S01_A1316 ca315bdba843ac5b5abd6d22746ec797 205 Gene3D G3DSA:1.10.150.240 22 87 2.0E-36 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Vc3S01_A1316 ca315bdba843ac5b5abd6d22746ec797 205 Gene3D G3DSA:3.40.50.1000 10 186 2.0E-36 T 12-10-2018 IPR023214 HAD superfamily Vc3S01_3194 2fc99b9f2d5045fcfc07c645dae6ae8c 94 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 3 70 4.0E-4 T 12-10-2018 Vc3S01_3194 2fc99b9f2d5045fcfc07c645dae6ae8c 94 SUPERFAMILY SSF55021 3 76 1.5E-10 T 12-10-2018 Vc3S01_3194 2fc99b9f2d5045fcfc07c645dae6ae8c 94 Gene3D G3DSA:3.30.70.260 1 89 2.3E-11 T 12-10-2018 Vc3S01_3194 2fc99b9f2d5045fcfc07c645dae6ae8c 94 Pfam PF13710 ACT domain 12 73 2.6E-20 T 12-10-2018 Vc3S01_0892 0c1203811252d95f4aea1b0ce1f3dd8c 244 Pfam PF11859 Protein of unknown function (DUF3379) 1 241 3.6E-82 T 12-10-2018 IPR021806 Protein of unknown function DUF3379 Vc3S01_2540 18f943ed8d726b9ba0be512c3aa7a243 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 39 223 2.7E-24 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Vc3S01_2540 18f943ed8d726b9ba0be512c3aa7a243 225 Gene3D G3DSA:1.10.3720.10 12 225 5.6E-52 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_2540 18f943ed8d726b9ba0be512c3aa7a243 225 SUPERFAMILY SSF161098 15 210 9.68E-48 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_1559 c50a8bdd98cc8a87da1c3344761bdcc0 508 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 18 444 2.9E-141 T 12-10-2018 IPR002823 Protein of unknown function DUF112, transmembrane Vc3S01_A1830 c6b22a3a02491f689aa5ae7db53e5b94 431 SUPERFAMILY SSF53474 41 419 2.17E-32 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Vc3S01_A1830 c6b22a3a02491f689aa5ae7db53e5b94 431 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 139 153 2.5E-8 T 12-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 Vc3S01_A1830 c6b22a3a02491f689aa5ae7db53e5b94 431 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 52 60 2.5E-8 T 12-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 Vc3S01_A1830 c6b22a3a02491f689aa5ae7db53e5b94 431 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 82 93 2.5E-8 T 12-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 Vc3S01_A1830 c6b22a3a02491f689aa5ae7db53e5b94 431 Pfam PF00561 alpha/beta hydrolase fold 50 240 2.7E-21 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Vc3S01_2902 3c44724f0d5603b9611868450b3d0ed1 301 Pfam PF10987 Protein of unknown function (DUF2806) 61 279 2.9E-86 T 12-10-2018 IPR021254 Protein of unknown function DUF2806 Vc3S01_2902 3c44724f0d5603b9611868450b3d0ed1 301 TIGRFAM TIGR03899 TIGR03899: TIGR03899 family protein 40 289 4.4E-110 T 12-10-2018 IPR021254 Protein of unknown function DUF2806 Vc3S01_A0534 fd09bcafe087885e531d63f70059066a 596 Gene3D G3DSA:3.30.70.2270 251 292 1.6E-32 T 12-10-2018 Vc3S01_A0534 fd09bcafe087885e531d63f70059066a 596 SUPERFAMILY SSF50370 460 545 1.19E-8 T 12-10-2018 IPR035992 Ricin B-like lectins Vc3S01_A0534 fd09bcafe087885e531d63f70059066a 596 Gene3D G3DSA:2.70.240.20 163 546 1.6E-32 T 12-10-2018 Vc3S01_A1625 5cbc4867fe0bb3751fb32815c5e52b17 448 Pfam PF07394 Protein of unknown function (DUF1501) 41 417 3.6E-37 T 12-10-2018 IPR010869 Protein of unknown function DUF1501 Vc3S01_3138 120ed74c5f4b0bab51b6f4b3cc3a8f91 109 Pfam PF00893 Small Multidrug Resistance protein 9 99 1.5E-19 T 12-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 Vc3S01_3138 120ed74c5f4b0bab51b6f4b3cc3a8f91 109 SUPERFAMILY SSF103481 12 107 9.94E-16 T 12-10-2018 Vc3S01_3138 120ed74c5f4b0bab51b6f4b3cc3a8f91 109 Gene3D G3DSA:1.10.3730.20 7 109 9.0E-22 T 12-10-2018 Vc3S01_2856 3775c62198d268afac8c96706ff91f4f 1063 Pfam PF02412 Thrombospondin type 3 repeat 392 433 0.0075 T 12-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 Vc3S01_2856 3775c62198d268afac8c96706ff91f4f 1063 Pfam PF02412 Thrombospondin type 3 repeat 458 499 0.01 T 12-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 Vc3S01_2856 3775c62198d268afac8c96706ff91f4f 1063 Pfam PF02412 Thrombospondin type 3 repeat 326 366 0.0037 T 12-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 Vc3S01_2856 3775c62198d268afac8c96706ff91f4f 1063 Pfam PF02412 Thrombospondin type 3 repeat 436 475 0.021 T 12-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 Vc3S01_2856 3775c62198d268afac8c96706ff91f4f 1063 Pfam PF02412 Thrombospondin type 3 repeat 348 389 0.0075 T 12-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 Vc3S01_2856 3775c62198d268afac8c96706ff91f4f 1063 Gene3D G3DSA:4.10.1080.10 490 562 5.2E-8 T 12-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 Vc3S01_2856 3775c62198d268afac8c96706ff91f4f 1063 Gene3D G3DSA:4.10.1080.10 282 411 2.0E-7 T 12-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 Vc3S01_0768 f7c95d07fb59eb6d3bfea361927bacf6 41 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 38 3.9E-7 T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_0768 f7c95d07fb59eb6d3bfea361927bacf6 41 SUPERFAMILY SSF57840 5 40 1.44E-13 T 12-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_0768 f7c95d07fb59eb6d3bfea361927bacf6 41 ProSitePatterns PS00828 Ribosomal protein L36 signature. 14 40 - T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_0768 f7c95d07fb59eb6d3bfea361927bacf6 41 Pfam PF00444 Ribosomal protein L36 1 40 4.6E-16 T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_0768 f7c95d07fb59eb6d3bfea361927bacf6 41 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 15.88 T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Vc3S01_A1808 50c4688680d302e0b405c4c0631f3cda 156 Gene3D G3DSA:3.40.630.30 10 156 1.4E-21 T 12-10-2018 Vc3S01_A1808 50c4688680d302e0b405c4c0631f3cda 156 Pfam PF00583 Acetyltransferase (GNAT) family 35 134 4.7E-7 T 12-10-2018 IPR000182 GNAT domain Vc3S01_A1808 50c4688680d302e0b405c4c0631f3cda 156 SUPERFAMILY SSF55729 29 153 1.32E-18 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_1224 d39ec79b0eb9ae9f4dadf34e9e1c1be1 377 Pfam PF00268 Ribonucleotide reductase, small chain 34 333 3.6E-49 T 12-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Vc3S01_1224 d39ec79b0eb9ae9f4dadf34e9e1c1be1 377 SUPERFAMILY SSF47240 3 341 3.05E-112 T 12-10-2018 IPR009078 Ferritin-like superfamily Vc3S01_1224 d39ec79b0eb9ae9f4dadf34e9e1c1be1 377 Gene3D G3DSA:1.10.620.20 2 341 2.3E-144 T 12-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 Vc3S01_1224 d39ec79b0eb9ae9f4dadf34e9e1c1be1 377 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 115 131 - T 12-10-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Vc3S01_A0129 456dba217e0c967d637ae25cf7ff756f 289 Gene3D G3DSA:1.10.10.10 3 91 7.6E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_A0129 456dba217e0c967d637ae25cf7ff756f 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 63 7.2E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Vc3S01_A0129 456dba217e0c967d637ae25cf7ff756f 289 Pfam PF03466 LysR substrate binding domain 88 288 4.2E-48 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_A0129 456dba217e0c967d637ae25cf7ff756f 289 Gene3D G3DSA:3.40.190.290 92 288 1.2E-69 T 12-10-2018 Vc3S01_A0129 456dba217e0c967d637ae25cf7ff756f 289 SUPERFAMILY SSF53850 89 288 1.16E-48 T 12-10-2018 Vc3S01_A0129 456dba217e0c967d637ae25cf7ff756f 289 SUPERFAMILY SSF46785 4 87 8.79E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_A1430 ba299eee12d18dc97a924fa6dab04528 300 Pfam PF00482 Type II secretion system (T2SS), protein F 132 256 3.4E-17 T 12-10-2018 IPR018076 Type II secretion system F domain Vc3S01_A1159 a9007e04d0805482e5e0d4014544152b 520 Pfam PF08811 Protein of unknown function (DUF1800) 41 506 1.2E-88 T 12-10-2018 IPR014917 Protein of unknown function DUF1800 Vc3S01_0398 c8c1aac1e70cf11bb6eaaffd0af50b28 153 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 2 145 1.1E-35 T 12-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 Vc3S01_0398 c8c1aac1e70cf11bb6eaaffd0af50b28 153 PIRSF PIRSF018472 1 153 2.9E-40 T 12-10-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type Vc3S01_0398 c8c1aac1e70cf11bb6eaaffd0af50b28 153 Pfam PF04093 rod shape-determining protein MreD 1 145 2.2E-39 T 12-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 Vc3S01_A1236 49859e4325fc8fefc443abedc97ad95d 112 SUPERFAMILY SSF47226 1 111 1.18E-16 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 Vc3S01_A1236 49859e4325fc8fefc443abedc97ad95d 112 Gene3D G3DSA:1.20.120.160 1 112 9.9E-10 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 Vc3S01_1300 5f29985c8228303ee0aa5d2b22e55388 227 Pfam PF15575 Immunity protein 49 151 208 2.6E-12 T 12-10-2018 IPR029074 Immunity protein 49 Vc3S01_0702 f11b4c7eec1f544762262789f84afa62 110 Gene3D G3DSA:2.40.50.140 1 110 1.8E-38 T 12-10-2018 Vc3S01_0702 f11b4c7eec1f544762262789f84afa62 110 Pfam PF01588 Putative tRNA binding domain 14 107 1.6E-30 T 12-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 Vc3S01_0702 f11b4c7eec1f544762262789f84afa62 110 SUPERFAMILY SSF50249 8 109 9.55E-33 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Vc3S01_p20056 8fd9c775d3caf8df7adfa27c918ffb67 297 Pfam PF14491 Protein of unknown function (DUF4435) 32 254 2.2E-17 T 12-10-2018 IPR029492 Domain of unknown function DUF4435 Vc3S01_A0421 86723c175751fbfc8f1cdcdc1c3030fa 165 SUPERFAMILY SSF48452 4 93 1.14E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_A0073 8e168c2c96a3e18a8fca8ff5e7addab8 117 Pfam PF04219 Protein of unknown function, DUF 12 100 4.1E-36 T 12-10-2018 IPR007335 Protein of unknown function DUF413 Vc3S01_A1824 191e9e99cf7af35e7b947169336c5b85 150 Gene3D G3DSA:3.10.129.10 2 138 9.7E-38 T 12-10-2018 Vc3S01_A1824 191e9e99cf7af35e7b947169336c5b85 150 Pfam PF13279 Thioesterase-like superfamily 16 134 5.7E-20 T 12-10-2018 Vc3S01_A1824 191e9e99cf7af35e7b947169336c5b85 150 SUPERFAMILY SSF54637 5 137 4.17E-34 T 12-10-2018 IPR029069 HotDog domain superfamily Vc3S01_p30034 7e6fd976207a22f53757cf0158da115e 127 SUPERFAMILY SSF53098 69 125 5.69E-5 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Vc3S01_A1398 a479c90e56d7d0d0ddf13283aed21d76 285 Pfam PF04116 Fatty acid hydroxylase superfamily 92 226 6.2E-31 T 12-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 Vc3S01_A0758 fb5c78690554d4610ead4d796b5360d9 69 SUPERFAMILY SSF50249 4 68 9.55E-25 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Vc3S01_A0758 fb5c78690554d4610ead4d796b5360d9 69 SMART SM00357 6 69 6.3E-32 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 Vc3S01_A0758 fb5c78690554d4610ead4d796b5360d9 69 PIRSF PIRSF002599 1 69 1.8E-24 T 12-10-2018 IPR012156 Cold shock, CspA GO:0003676 Vc3S01_A0758 fb5c78690554d4610ead4d796b5360d9 69 Pfam PF00313 'Cold-shock' DNA-binding domain 6 68 3.6E-30 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Vc3S01_A0758 fb5c78690554d4610ead4d796b5360d9 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 36 - T 12-10-2018 IPR019844 Cold-shock conserved site Vc3S01_A0758 fb5c78690554d4610ead4d796b5360d9 69 PRINTS PR00050 Cold shock protein signature 42 60 4.3E-18 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Vc3S01_A0758 fb5c78690554d4610ead4d796b5360d9 69 PRINTS PR00050 Cold shock protein signature 7 22 4.3E-18 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Vc3S01_A0758 fb5c78690554d4610ead4d796b5360d9 69 PRINTS PR00050 Cold shock protein signature 27 36 4.3E-18 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Vc3S01_A0758 fb5c78690554d4610ead4d796b5360d9 69 Gene3D G3DSA:2.40.50.140 4 68 6.2E-30 T 12-10-2018 Vc3S01_2029 6720507f6de0e90e94c9214a50b6f531 579 Gene3D G3DSA:3.20.20.70 189 495 1.4E-92 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Vc3S01_2029 6720507f6de0e90e94c9214a50b6f531 579 SUPERFAMILY SSF51445 194 534 1.06E-76 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily Vc3S01_2029 6720507f6de0e90e94c9214a50b6f531 579 Pfam PF02065 Melibiase 158 352 2.4E-18 T 12-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 Vc3S01_1283 223ff4d90d7e66510da4ee88ee317379 346 Pfam PF05128 Domain of unknown function (DUF697) 181 339 4.2E-49 T 12-10-2018 IPR021147 Protein of unknown function DUF697 Vc3S01_1283 223ff4d90d7e66510da4ee88ee317379 346 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 55 339 4.0E-74 T 12-10-2018 IPR006507 Uncharacterised protein family UPF0283 Vc3S01_1283 223ff4d90d7e66510da4ee88ee317379 346 Hamap MF_01085 UPF0283 membrane protein YcjF [ycjF]. 3 346 33.677 T 12-10-2018 IPR006507 Uncharacterised protein family UPF0283 Vc3S01_A1483 0930cced30a58230d7310048a45cd6a3 294 SUPERFAMILY SSF81452 4 294 1.05E-77 T 12-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A1483 0930cced30a58230d7310048a45cd6a3 294 Pfam PF00510 Cytochrome c oxidase subunit III 8 293 2.0E-48 T 12-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A1483 0930cced30a58230d7310048a45cd6a3 294 Gene3D G3DSA:1.20.120.80 79 294 4.2E-62 T 12-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_A1483 0930cced30a58230d7310048a45cd6a3 294 Gene3D G3DSA:1.10.287.70 1 78 1.2E-17 T 12-10-2018 Vc3S01_3051 6e11e532558b564ead072dbcc7cb6ca0 253 Pfam PF01203 Type II secretion system (T2SS), protein N 37 247 1.3E-57 T 12-10-2018 IPR022792 Type II secretion system, protein N Vc3S01_A1850 1194f0d5f60817a38bccaa119d3ad8b5 354 Pfam PF13265 Protein of unknown function (DUF4056) 19 280 3.7E-110 T 12-10-2018 IPR025130 Protein of unknown function DUF4056 Vc3S01_2764 72b8d824dd5720c0a8b662376b91684a 259 Pfam PF01925 Sulfite exporter TauE/SafE 11 246 2.8E-41 T 12-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 Vc3S01_0617 5961b8dcab0a47110cdd8b884a230814 281 Pfam PF01769 Divalent cation transporter 142 271 8.3E-27 T 12-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 Vc3S01_0617 5961b8dcab0a47110cdd8b884a230814 281 SUPERFAMILY SSF161093 99 278 2.35E-44 T 12-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 Vc3S01_0617 5961b8dcab0a47110cdd8b884a230814 281 Gene3D G3DSA:1.10.357.20 94 278 5.8E-53 T 12-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain Vc3S01_A1307 ee823be526b1148a0289abe1feed52b3 1586 SUPERFAMILY SSF103088 633 751 7.72E-20 T 12-10-2018 IPR036737 OmpA-like domain superfamily Vc3S01_A1307 ee823be526b1148a0289abe1feed52b3 1586 PRINTS PR01021 OMPA domain signature 673 688 6.1E-6 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Vc3S01_A1307 ee823be526b1148a0289abe1feed52b3 1586 PRINTS PR01021 OMPA domain signature 688 704 6.1E-6 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Vc3S01_A1307 ee823be526b1148a0289abe1feed52b3 1586 Gene3D G3DSA:3.30.1330.60 611 756 1.6E-20 T 12-10-2018 IPR036737 OmpA-like domain superfamily Vc3S01_A1307 ee823be526b1148a0289abe1feed52b3 1586 Pfam PF00691 OmpA family 641 745 1.1E-12 T 12-10-2018 IPR006665 OmpA-like domain Vc3S01_2276 ddcb267c0d4780d7a9ab0935ed677994 130 Pfam PF07233 Protein of unknown function (DUF1425) 35 125 4.2E-29 T 12-10-2018 IPR010824 Protein of unknown function DUF1425 Vc3S01_2276 ddcb267c0d4780d7a9ab0935ed677994 130 Gene3D G3DSA:2.60.40.3230 18 130 2.0E-27 T 12-10-2018 IPR038483 YcfL-like superfamily Vc3S01_p30012 51fdaaa529154884622860553b9867da 170 SUPERFAMILY SSF53098 94 133 1.31E-6 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Vc3S01_p30012 51fdaaa529154884622860553b9867da 170 Pfam PF01527 Transposase 3 56 1.4E-8 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Vc3S01_p30012 51fdaaa529154884622860553b9867da 170 SUPERFAMILY SSF46689 2 54 2.51E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Vc3S01_2901 d7049bf4904d18c1a12700f1043ee5b0 164 Gene3D G3DSA:2.40.50.870 23 164 6.6E-46 T 12-10-2018 Vc3S01_2901 d7049bf4904d18c1a12700f1043ee5b0 164 Pfam PF11736 Protein of unknown function (DUF3299) 30 159 1.2E-43 T 12-10-2018 IPR021727 Protein of unknown function DUF3299 Vc3S01_2871 b9092ccdc76e6ef42f32ebf9fbe7dcdc 227 Pfam PF06738 Putative threonine/serine exporter 1 219 1.4E-60 T 12-10-2018 IPR010619 Putative threonine/serine exporter Vc3S01_p20228 62f0e06d0501cd22e63cbb2da3838e48 233 Pfam PF09904 Winged helix-turn helix 7 89 9.5E-30 T 12-10-2018 IPR017162 Uncharacterised conserved protein UCP037266 Vc3S01_p20228 62f0e06d0501cd22e63cbb2da3838e48 233 Gene3D G3DSA:1.10.10.10 1 103 2.3E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_1569 40a5c5afa2884a0b8bd47ed0f091abbf 443 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 441 4.5E-105 T 12-10-2018 IPR010263 Type VI secretion protein, VC_A0114 Vc3S01_1569 40a5c5afa2884a0b8bd47ed0f091abbf 443 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 443 1.7E-97 T 12-10-2018 IPR010263 Type VI secretion protein, VC_A0114 Vc3S01_A1657 cb9d4e5f33b0ae321682f7f6317bd364 130 Pfam PF12614 Ribosome recycling factor 4 128 1.2E-57 T 12-10-2018 IPR022253 Ribosome recycling factor. bacterial Vc3S01_A1013 15a8d86c2de0131b4113bbdd92267fc9 164 Pfam PF14317 YcxB-like protein 99 154 6.4E-7 T 12-10-2018 IPR025588 YcxB-like protein Vc3S01_0204 41be7d2c1bc96b3426ea7834143c0310 87 Pfam PF13937 Domain of unknown function (DUF4212) 9 86 1.6E-34 T 12-10-2018 IPR019886 Sodium symporter small subunit, predicted Vc3S01_0204 41be7d2c1bc96b3426ea7834143c0310 87 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 11 87 3.9E-36 T 12-10-2018 IPR019886 Sodium symporter small subunit, predicted Vc3S01_2969 31f418a09d831f07fe992002d0484100 461 Pfam PF04432 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus 171 337 8.3E-28 T 12-10-2018 IPR007525 Coenzyme F420 hydrogenase/dehydrogenase beta subunit, C-terminal Vc3S01_2969 31f418a09d831f07fe992002d0484100 461 Pfam PF04422 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term 89 163 6.3E-14 T 12-10-2018 IPR007516 Coenzyme F420 hydrogenase/dehydrogenase beta subunit, N-terminal Vc3S01_1727 1aaba754d0be71f9db50c53946223a04 390 Gene3D G3DSA:3.40.50.2000 175 353 1.6E-20 T 12-10-2018 Vc3S01_1727 1aaba754d0be71f9db50c53946223a04 390 SUPERFAMILY SSF53756 10 358 1.94E-28 T 12-10-2018 Vc3S01_1727 1aaba754d0be71f9db50c53946223a04 390 Pfam PF00534 Glycosyl transferases group 1 197 334 3.6E-13 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 Vc3S01_1727 1aaba754d0be71f9db50c53946223a04 390 Gene3D G3DSA:3.40.50.2000 109 358 1.6E-20 T 12-10-2018 Vc3S01_2491 7cc37ebee3f1d68a32eca64b9557b82d 230 Pfam PF06178 Oligogalacturonate-specific porin protein (KdgM) 46 180 2.1E-5 T 12-10-2018 IPR009331 Oligogalacturonate-specific porin Vc3S01_2491 7cc37ebee3f1d68a32eca64b9557b82d 230 Gene3D G3DSA:2.40.160.40 36 230 2.4E-12 T 12-10-2018 Vc3S01_A1395 15ecf8c8ac04b0513d0313f825b7e3a1 172 Gene3D G3DSA:3.30.160.670 13 171 3.8E-26 T 12-10-2018 Vc3S01_A1395 15ecf8c8ac04b0513d0313f825b7e3a1 172 Pfam PF13590 Domain of unknown function (DUF4136) 20 169 2.0E-26 T 12-10-2018 IPR025411 Domain of unknown function DUF4136 Vc3S01_0720 b91d12a183afa73fdd70accf1f2d6966 268 Pfam PF03466 LysR substrate binding domain 53 257 1.2E-47 T 12-10-2018 IPR005119 LysR, substrate-binding Vc3S01_0720 b91d12a183afa73fdd70accf1f2d6966 268 Gene3D G3DSA:1.10.10.10 1 54 1.3E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Vc3S01_0720 b91d12a183afa73fdd70accf1f2d6966 268 SUPERFAMILY SSF46785 2 76 1.72E-7 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Vc3S01_0720 b91d12a183afa73fdd70accf1f2d6966 268 Gene3D G3DSA:3.40.190.290 57 259 3.2E-35 T 12-10-2018 Vc3S01_0720 b91d12a183afa73fdd70accf1f2d6966 268 SUPERFAMILY SSF53850 55 259 4.48E-42 T 12-10-2018 Vc3S01_1543 7356984517648a08024740409aec062a 463 SUPERFAMILY SSF56954 6 438 1.96E-69 T 12-10-2018 Vc3S01_1543 7356984517648a08024740409aec062a 463 Pfam PF02321 Outer membrane efflux protein 28 234 9.0E-27 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Vc3S01_1543 7356984517648a08024740409aec062a 463 Pfam PF02321 Outer membrane efflux protein 257 438 1.5E-24 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Vc3S01_1543 7356984517648a08024740409aec062a 463 Gene3D G3DSA:1.20.1600.10 23 450 7.9E-65 T 12-10-2018 Vc3S01_2915 f83921d744c6a65e3ccdd5ee305593d9 159 Pfam PF11075 Protein of unknown function VcgC/VcgE (DUF2780) 12 152 6.5E-32 T 12-10-2018 IPR021302 Protein of unknown function DUF2780, VcgC/VcgE Vc3S01_2493 37488ded46113b2297ea93ffb99254c7 290 Pfam PF01963 TraB family 26 279 2.9E-54 T 12-10-2018 IPR002816 Pheromone shutdown, TraB Vc3S01_2760 6de8e9be40535b6246023f91bb396021 301 Pfam PF03186 CobD/Cbib protein 3 270 8.9E-30 T 12-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 Vc3S01_1976 7401c97f2643265bbd8a01bf7df9de9f 431 Pfam PF09335 SNARE associated Golgi protein 23 147 3.9E-17 T 12-10-2018 IPR032816 SNARE associated Golgi protein Vc3S01_1976 7401c97f2643265bbd8a01bf7df9de9f 431 Pfam PF14067 LssY C-terminus 248 384 2.5E-38 T 12-10-2018 IPR025902 LssY-like C-terminal domain Vc3S01_1366 8ca32e42c96f0febd09e753b33bbb6c7 150 SUPERFAMILY SSF55729 10 130 8.02E-20 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_1366 8ca32e42c96f0febd09e753b33bbb6c7 150 Pfam PF13508 Acetyltransferase (GNAT) domain 61 129 7.0E-12 T 12-10-2018 IPR000182 GNAT domain Vc3S01_1366 8ca32e42c96f0febd09e753b33bbb6c7 150 Gene3D G3DSA:3.40.630.30 7 142 4.3E-22 T 12-10-2018 Vc3S01_0648 ac70d097c9de2e57ba452b9afedc1a52 55 Pfam PF17320 Family of unknown function (DUF5363) 1 52 3.6E-11 T 12-10-2018 IPR035292 Protein of unknown function DUF5363 Vc3S01_A0250 5e6a154e4e7b16fd29ec284bcfb7b0c1 173 Gene3D G3DSA:3.30.460.10 6 173 3.8E-38 T 12-10-2018 Vc3S01_A0250 5e6a154e4e7b16fd29ec284bcfb7b0c1 173 SUPERFAMILY SSF81301 12 171 4.9E-37 T 12-10-2018 Vc3S01_A0250 5e6a154e4e7b16fd29ec284bcfb7b0c1 173 Pfam PF04229 GrpB protein 10 171 1.2E-36 T 12-10-2018 IPR007344 GrpB/Dephospho-CoA kinase Vc3S01_1353 3297710c9bbb9f89c3946fe2e8e1bd99 41 Pfam PF07362 Post-segregation antitoxin CcdA 1 41 8.9E-13 T 12-10-2018 IPR009956 Post-segregation antitoxin CcdA Vc3S01_A0614 fb43e143971f64d13f43f6aa5a17d994 245 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 11 68 1.0E-7 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Vc3S01_A0614 fb43e143971f64d13f43f6aa5a17d994 245 SMART SM00530 10 65 7.3E-4 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Vc3S01_A0614 fb43e143971f64d13f43f6aa5a17d994 245 SUPERFAMILY SSF47413 5 68 6.38E-7 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Vc3S01_3135 1e0ff75590636891e4dd67c99a04ddba 458 Pfam PF02447 GntP family permease 14 456 1.4E-119 T 12-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 Vc3S01_3135 1e0ff75590636891e4dd67c99a04ddba 458 PIRSF PIRSF002746 9 458 1.0E-145 T 12-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 Vc3S01_3135 1e0ff75590636891e4dd67c99a04ddba 458 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 14 457 1.4E-108 T 12-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 Vc3S01_2132 8ff48ab39d0b5e3533be417ae1fde312 334 Pfam PF05844 YopD protein 87 331 1.8E-38 T 12-10-2018 IPR008898 YopD-like Vc3S01_3026 bc1c780a4ab07cb442a69424f905aa42 867 Pfam PF00593 TonB dependent receptor 372 864 4.1E-48 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Vc3S01_3026 bc1c780a4ab07cb442a69424f905aa42 867 Gene3D G3DSA:2.170.130.10 33 169 1.4E-33 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Vc3S01_3026 bc1c780a4ab07cb442a69424f905aa42 867 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 165 4.2E-20 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain Vc3S01_3026 bc1c780a4ab07cb442a69424f905aa42 867 SUPERFAMILY SSF56935 40 867 4.03E-95 T 12-10-2018 Vc3S01_A0799 2066ffbe934f8f0a1e04f50bac543db3 279 SUPERFAMILY SSF52768 32 250 1.8E-21 T 12-10-2018 IPR023696 Ureohydrolase domain superfamily Vc3S01_A0799 2066ffbe934f8f0a1e04f50bac543db3 279 Gene3D G3DSA:3.40.800.10 37 250 3.4E-8 T 12-10-2018 Vc3S01_A0706 5123dcb36dadfba20e82d244f832cfb9 150 Pfam PF07409 Phage protein GP46 27 139 7.6E-36 T 12-10-2018 IPR010877 Bacteriophage Mu, Gp46 Vc3S01_A1011 b6cfe5e342637dd9649c68b8e74967ea 141 Gene3D G3DSA:3.10.450.50 28 141 4.7E-24 T 12-10-2018 Vc3S01_A1011 b6cfe5e342637dd9649c68b8e74967ea 141 SUPERFAMILY SSF54427 25 140 1.93E-21 T 12-10-2018 IPR032710 NTF2-like domain superfamily Vc3S01_A1011 b6cfe5e342637dd9649c68b8e74967ea 141 Pfam PF14534 Domain of unknown function (DUF4440) 29 132 2.5E-9 T 12-10-2018 IPR027843 Domain of unknown function DUF4440 Vc3S01_p40005 091c0ba59553aa77e57c9dfaebc66941 167 Gene3D G3DSA:3.30.1690.10 51 137 3.0E-5 T 12-10-2018 Vc3S01_2348 7651884194eda2077e85ea88430d1f5c 240 SUPERFAMILY SSF53955 75 186 1.03E-11 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily Vc3S01_2348 7651884194eda2077e85ea88430d1f5c 240 Gene3D G3DSA:1.10.530.10 79 193 1.2E-8 T 12-10-2018 Vc3S01_2348 7651884194eda2077e85ea88430d1f5c 240 Pfam PF01464 Transglycosylase SLT domain 93 146 3.4E-5 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 Vc3S01_1155 e89b7a82a506a11cdb9e70432bbb57fb 142 Pfam PF05932 Tir chaperone protein (CesT) family 7 112 9.0E-15 T 12-10-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 Vc3S01_1155 e89b7a82a506a11cdb9e70432bbb57fb 142 SUPERFAMILY SSF69635 4 129 2.47E-41 T 12-10-2018 Vc3S01_1155 e89b7a82a506a11cdb9e70432bbb57fb 142 Gene3D G3DSA:3.30.1460.10 1 135 6.3E-40 T 12-10-2018 Vc3S01_p20006 fbc511cfc05c70255d3057f513ca0a15 143 Pfam PF12120 Rifampin ADP-ribosyl transferase 16 114 1.9E-46 T 12-10-2018 IPR021975 Rifampin ADP-ribosyltransferase Vc3S01_p20006 fbc511cfc05c70255d3057f513ca0a15 143 Gene3D G3DSA:3.20.170.40 1 142 9.5E-59 T 12-10-2018 IPR038611 Rifampin ADP-ribosyltransferase superfamily Vc3S01_A1530 66b4a637e24b620346b04006c801d3a0 120 SUPERFAMILY SSF55298 1 116 1.19E-26 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Vc3S01_A1530 66b4a637e24b620346b04006c801d3a0 120 Pfam PF01042 Endoribonuclease L-PSP 33 114 4.6E-20 T 12-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 Vc3S01_A1530 66b4a637e24b620346b04006c801d3a0 120 Gene3D G3DSA:3.30.1330.40 1 118 6.1E-30 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Vc3S01_2909 eff8704a149646090a3b1c0d521717fe 190 SUPERFAMILY SSF51206 16 136 1.44E-21 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like Vc3S01_2909 eff8704a149646090a3b1c0d521717fe 190 Gene3D G3DSA:2.60.120.10 2 140 1.4E-20 T 12-10-2018 IPR014710 RmlC-like jelly roll fold Vc3S01_2909 eff8704a149646090a3b1c0d521717fe 190 Pfam PF00027 Cyclic nucleotide-binding domain 30 112 1.9E-9 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain Vc3S01_2140 10bb742d54ced556d157d2368cf2e197 125 TIGRFAM TIGR02502 type_III_YscX: type III secretion protein, YscX family 1 125 1.8E-49 T 12-10-2018 IPR012672 Type III secretion system YscX Vc3S01_2140 10bb742d54ced556d157d2368cf2e197 125 Pfam PF09474 Type III secretion system YscX (type_III_YscX) 1 125 1.2E-45 T 12-10-2018 IPR012672 Type III secretion system YscX Vc3S01_1887 fb2c2344037c5456979b36f9270468d2 181 Pfam PF00583 Acetyltransferase (GNAT) family 68 153 8.0E-10 T 12-10-2018 IPR000182 GNAT domain Vc3S01_1887 fb2c2344037c5456979b36f9270468d2 181 Gene3D G3DSA:3.40.630.30 6 177 1.3E-16 T 12-10-2018 Vc3S01_1887 fb2c2344037c5456979b36f9270468d2 181 SUPERFAMILY SSF55729 6 177 2.03E-19 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_0879 a58388cb7f35b70377837436fd854d11 163 Pfam PF10975 Protein of unknown function (DUF2802) 68 135 1.2E-22 T 12-10-2018 IPR021244 Protein of unknown function DUF2802 Vc3S01_A0810 8531fbd1f44515a7fc02e8bc6974aea6 118 Pfam PF11225 Protein of unknown function (DUF3024) 59 117 9.6E-18 T 12-10-2018 IPR021388 Bacteriophage 933W, L0084 Vc3S01_2737 26db9a73dbab38929ea2e2f47e06b008 61 Pfam PF12065 Protein of unknown function (DUF3545) 1 60 6.8E-25 T 12-10-2018 IPR021932 Protein of unknown function DUF3545 Vc3S01_0360 7ccd353d4d2660ae799f2cb4cd11b056 221 TIGRFAM TIGR04219 OMP_w_GlyGly: outer membrane protein 6 221 2.2E-55 T 12-10-2018 IPR026387 Outer membrane protein Vc3S01_2250 fbb67de1e04a3d4621db05a13a490aec 515 Pfam PF11840 Protein of unknown function (DUF3360) 11 514 1.1E-263 T 12-10-2018 IPR021794 Protein of unknown function DUF3360 Vc3S01_A1006 57013ee3adfd759ff966271e50618944 286 Pfam PF15575 Immunity protein 49 76 276 6.0E-25 T 12-10-2018 IPR029074 Immunity protein 49 Vc3S01_0953 c9649cf87373038e493629a2f0509941 94 Pfam PF07023 Protein of unknown function (DUF1315) 4 84 9.8E-29 T 12-10-2018 IPR009749 Protein of unknown function DUF1315 Vc3S01_1841 0b41074fc9a79d95c00f9b4e79e96420 204 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 186 1.3E-36 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Vc3S01_1841 0b41074fc9a79d95c00f9b4e79e96420 204 SMART SM00855 5 154 6.7E-10 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Vc3S01_1841 0b41074fc9a79d95c00f9b4e79e96420 204 Gene3D G3DSA:3.40.50.1240 1 204 9.1E-58 T 12-10-2018 IPR029033 Histidine phosphatase superfamily Vc3S01_1841 0b41074fc9a79d95c00f9b4e79e96420 204 SUPERFAMILY SSF53254 1 185 2.57E-36 T 12-10-2018 IPR029033 Histidine phosphatase superfamily Vc3S01_1841 0b41074fc9a79d95c00f9b4e79e96420 204 PIRSF PIRSF000709 1 172 1.4E-4 T 12-10-2018 Vc3S01_p20014 3a374f70b71805f429b2679959615a45 546 Pfam PF03743 Bacterial conjugation TrbI-like protein 342 484 1.8E-6 T 12-10-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI Vc3S01_1289 96ce69c5350b108918f7cc75eb870d9f 253 Pfam PF08867 FRG domain 20 112 1.5E-20 T 12-10-2018 IPR014966 FRG domain Vc3S01_1289 96ce69c5350b108918f7cc75eb870d9f 253 SMART SM00901 18 125 2.2E-21 T 12-10-2018 IPR014966 FRG domain Vc3S01_3147 6f7153b5abe1d7989861529e23027b90 329 Pfam PF05036 Sporulation related domain 73 143 8.4E-7 T 12-10-2018 IPR007730 Sporulation-like domain GO:0042834 Vc3S01_3147 6f7153b5abe1d7989861529e23027b90 329 SUPERFAMILY SSF110997 71 143 3.01E-5 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Vc3S01_p20136 c5c8d838cb69b86fdb11e965a91bbcb2 174 Gene3D G3DSA:3.55.50.60 43 172 1.8E-9 T 12-10-2018 IPR038140 DotD superfamily Vc3S01_A0486 45cee89c59ab1005be55511c6a23652b 1171 SUPERFAMILY SSF56935 828 1113 2.9E-8 T 12-10-2018 Vc3S01_A0486 45cee89c59ab1005be55511c6a23652b 1171 Gene3D G3DSA:2.40.160.10 1004 1165 5.0E-6 T 12-10-2018 IPR023614 Porin domain superfamily Vc3S01_A1696 2ada99be96b52b903e716aa1029db7da 289 Gene3D G3DSA:1.20.81.30 113 222 5.1E-6 T 12-10-2018 Vc3S01_A1696 2ada99be96b52b903e716aa1029db7da 289 Pfam PF00482 Type II secretion system (T2SS), protein F 121 245 1.1E-11 T 12-10-2018 IPR018076 Type II secretion system F domain Vc3S01_A1979 d76b88136ba684c0a153aa13b7d77f3d 258 SUPERFAMILY SSF51658 1 258 7.88E-84 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily Vc3S01_A1979 d76b88136ba684c0a153aa13b7d77f3d 258 Gene3D G3DSA:3.20.20.150 1 258 8.4E-80 T 12-10-2018 Vc3S01_A1979 d76b88136ba684c0a153aa13b7d77f3d 258 Pfam PF01261 Xylose isomerase-like TIM barrel 21 219 3.8E-36 T 12-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain Vc3S01_A1979 d76b88136ba684c0a153aa13b7d77f3d 258 PIRSF PIRSF006241 1 258 5.0E-98 T 12-10-2018 IPR026040 Hydroxypyruvate isomerase-like Vc3S01_A0457 35c04e7b8134957f0c7d3a7fa9ef9b4c 190 Pfam PF07603 Protein of unknown function (DUF1566) 42 186 1.5E-22 T 12-10-2018 IPR011460 Protein of unknown function DUF1566 Vc3S01_3070 1081cbca06adb7d460f9c645081d5a8f 189 Pfam PF11172 Protein of unknown function (DUF2959) 1 186 7.0E-83 T 12-10-2018 IPR021342 Protein of unknown function DUF2959 Vc3S01_2274 3b251dd1b8e34e21b314333ff02a8555 293 Pfam PF01636 Phosphotransferase enzyme family 30 230 1.1E-10 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase Vc3S01_2274 3b251dd1b8e34e21b314333ff02a8555 293 Gene3D G3DSA:3.90.1200.10 112 286 4.0E-13 T 12-10-2018 Vc3S01_2274 3b251dd1b8e34e21b314333ff02a8555 293 TIGRFAM TIGR02721 ycfN_thiK: thiamine kinase 30 284 4.5E-96 T 12-10-2018 IPR014093 Thiamine kinase GO:0006772|GO:0016310|GO:0019165 KEGG: 00730+2.7.1.89|MetaCyc: PWY-6896 Vc3S01_2274 3b251dd1b8e34e21b314333ff02a8555 293 SUPERFAMILY SSF56112 24 270 9.18E-38 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily Vc3S01_A1977 2a32f1a607baf991ac5b0694ea32d224 139 SUPERFAMILY SSF54593 2 127 1.34E-23 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Vc3S01_A1977 2a32f1a607baf991ac5b0694ea32d224 139 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 105 3.0E-10 T 12-10-2018 Vc3S01_A1977 2a32f1a607baf991ac5b0694ea32d224 139 Gene3D G3DSA:3.10.180.10 5 129 2.7E-19 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Vc3S01_0483 a10b20f003a8ffffc9d0d3cddcb224a8 265 Pfam PF09955 Predicted integral membrane protein (DUF2189) 82 195 6.9E-28 T 12-10-2018 IPR018692 Predicted integral membrane protein DUF2189 Vc3S01_A0760 60abdff8f75b34251bc4d3a21c0b6afb 387 Pfam PF06738 Putative threonine/serine exporter 95 230 3.4E-14 T 12-10-2018 IPR010619 Putative threonine/serine exporter Vc3S01_A0760 60abdff8f75b34251bc4d3a21c0b6afb 387 Pfam PF12821 Threonine/Serine exporter, ThrE 257 377 9.2E-8 T 12-10-2018 IPR024528 Threonine/Serine exporter, ThrE Vc3S01_3103 1fa3fdceca2e6685a0f9785bcedff6de 265 Gene3D G3DSA:3.40.190.10 39 263 1.2E-78 T 12-10-2018 Vc3S01_3103 1fa3fdceca2e6685a0f9785bcedff6de 265 Pfam PF13531 Bacterial extracellular solute-binding protein 38 263 3.1E-25 T 12-10-2018 Vc3S01_3103 1fa3fdceca2e6685a0f9785bcedff6de 265 SUPERFAMILY SSF53850 35 263 1.59E-31 T 12-10-2018 Vc3S01_3103 1fa3fdceca2e6685a0f9785bcedff6de 265 Gene3D G3DSA:3.40.190.10 116 229 1.2E-78 T 12-10-2018 Vc3S01_A1858 ac40ea631a3c335c0009c9d54389de2f 238 Pfam PF13462 Thioredoxin 77 234 3.2E-18 T 12-10-2018 IPR012336 Thioredoxin-like fold Vc3S01_A1858 ac40ea631a3c335c0009c9d54389de2f 238 SUPERFAMILY SSF52833 69 233 1.15E-32 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Vc3S01_A1858 ac40ea631a3c335c0009c9d54389de2f 238 Gene3D G3DSA:3.40.30.10 68 238 1.2E-34 T 12-10-2018 Vc3S01_1731 c9975ffe3556846d09e180caea9896b5 450 Pfam PF13807 G-rich domain on putative tyrosine kinase 339 418 1.4E-6 T 12-10-2018 IPR032807 Tyrosine kinase, G-rich domain Vc3S01_0748 f2e79796aba031a77f44794e22ab4d1a 413 PIRSF PIRSF016055 1 413 5.7E-199 T 12-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 Vc3S01_0748 f2e79796aba031a77f44794e22ab4d1a 413 Pfam PF03116 NQR2, RnfD, RnfE family 40 404 6.0E-107 T 12-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 Vc3S01_0748 f2e79796aba031a77f44794e22ab4d1a 413 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 1 411 36.49 T 12-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 Vc3S01_0748 f2e79796aba031a77f44794e22ab4d1a 413 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 2 407 3.0E-203 T 12-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 Vc3S01_A1781 83daf7dc58d2a556f61f03a180fbae26 266 SUPERFAMILY SSF54506 1 264 1.75E-70 T 12-10-2018 Vc3S01_A1781 83daf7dc58d2a556f61f03a180fbae26 266 Gene3D G3DSA:3.10.310.10 116 254 1.2E-87 T 12-10-2018 Vc3S01_A1781 83daf7dc58d2a556f61f03a180fbae26 266 Gene3D G3DSA:3.10.310.10 6 262 1.2E-87 T 12-10-2018 Vc3S01_A1781 83daf7dc58d2a556f61f03a180fbae26 266 Pfam PF02567 Phenazine biosynthesis-like protein 8 262 2.5E-66 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 Vc3S01_A1781 83daf7dc58d2a556f61f03a180fbae26 266 PIRSF PIRSF016184 1 266 1.2E-53 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 Vc3S01_A1781 83daf7dc58d2a556f61f03a180fbae26 266 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 2 266 3.7E-45 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 Vc3S01_A0894 030f94dc8d25ba06ce673f6446aa1846 534 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 45 522 3.3E-143 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 Vc3S01_1173 99f175b698e88f442747a3267af8eaa0 140 Pfam PF04138 GtrA-like protein 18 137 9.8E-22 T 12-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 Vc3S01_1364 161c25b84dbd0c84294f065c844e0578 103 SUPERFAMILY SSF54909 1 69 4.09E-7 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel Vc3S01_A1745 a71e2a1bae884dc111ac57aecd233131 241 SUPERFAMILY SSF55811 16 159 2.38E-18 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Vc3S01_A1745 a71e2a1bae884dc111ac57aecd233131 241 Pfam PF00293 NUDIX domain 19 149 9.3E-9 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Vc3S01_A1745 a71e2a1bae884dc111ac57aecd233131 241 Gene3D G3DSA:3.90.79.10 3 161 8.6E-27 T 12-10-2018 Vc3S01_A1429 f777cfa47bd3775d2e6d325018cb5ba5 280 Pfam PF00482 Type II secretion system (T2SS), protein F 142 269 2.4E-16 T 12-10-2018 IPR018076 Type II secretion system F domain Vc3S01_0418 f6f5fd65792dc9297e57e5b7c8931079 164 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 1 160 24.603 T 12-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 Vc3S01_0418 f6f5fd65792dc9297e57e5b7c8931079 164 Gene3D G3DSA:2.60.450.10 20 157 1.0E-41 T 12-10-2018 Vc3S01_0418 f6f5fd65792dc9297e57e5b7c8931079 164 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 20 160 1.2E-47 T 12-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 Vc3S01_0418 f6f5fd65792dc9297e57e5b7c8931079 164 Pfam PF03968 OstA-like protein 30 141 6.9E-30 T 12-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal Vc3S01_A0123 47b9ca24ee4b2001532a45fae5db3a1e 359 Gene3D G3DSA:2.40.160.50 152 263 8.5E-9 T 12-10-2018 Vc3S01_A0123 47b9ca24ee4b2001532a45fae5db3a1e 359 Pfam PF01103 Surface antigen 170 249 3.3E-7 T 12-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 Vc3S01_0243 8ebd0f514fcd9bcf091f587755300d15 448 Pfam PF00939 Sodium:sulfate symporter transmembrane region 2 441 2.0E-47 T 12-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 Vc3S01_0243 8ebd0f514fcd9bcf091f587755300d15 448 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 13 445 1.2E-81 T 12-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 Vc3S01_2106 d3a446d792ee99c45f5251a50bc083f3 463 Pfam PF03606 C4-dicarboxylate anaerobic carrier 19 458 4.1E-80 T 12-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 Vc3S01_0130 455670db0fa3914f8dae413e1129acca 284 Gene3D G3DSA:1.10.357.140 19 173 2.8E-44 T 12-10-2018 Vc3S01_0130 455670db0fa3914f8dae413e1129acca 284 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 8 283 3.6E-109 T 12-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 Vc3S01_0130 455670db0fa3914f8dae413e1129acca 284 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 1 284 29.922 T 12-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 Vc3S01_0130 455670db0fa3914f8dae413e1129acca 284 Pfam PF01040 UbiA prenyltransferase family 24 266 2.7E-71 T 12-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 Vc3S01_0072 f3a1cd723cc6b336e482e1d31eb82d8c 500 Pfam PF08811 Protein of unknown function (DUF1800) 12 498 5.0E-78 T 12-10-2018 IPR014917 Protein of unknown function DUF1800 Vc3S01_0935 8142e38f3c597e168b1b16056e387e5f 83 Pfam PF04226 Transglycosylase associated protein 33 80 2.1E-13 T 12-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 Vc3S01_A1707 6d23dfe8b93ccb27111587723f5f820e 64 Pfam PF04964 Flp/Fap pilin component 7 52 1.6E-9 T 12-10-2018 IPR007047 Flp/Fap pilin component Vc3S01_A0325 3bc7d8e591c4d37ed5b48b569d17b0e1 182 Pfam PF10135 Rod binding protein 54 104 4.7E-11 T 12-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal Vc3S01_0470 d49ac82d10740d4995cecab30e132ff2 143 Gene3D G3DSA:2.60.40.3340 14 143 6.1E-42 T 12-10-2018 Vc3S01_0470 d49ac82d10740d4995cecab30e132ff2 143 Pfam PF14467 Domain of unknown function (DUF4426) 23 142 8.3E-50 T 12-10-2018 IPR025218 Domain of unknown function DUF4426 Vc3S01_1966 af8b818a8835f67e1a819e535fd3b81b 220 Pfam PF11140 Protein of unknown function (DUF2913) 3 214 1.8E-84 T 12-10-2018 IPR021316 Protein of unknown function DUF2913 Vc3S01_A1057 ffe5476eb3a2078f33c9963d456d91dc 181 PIRSF PIRSF011489 1 179 3.5E-72 T 12-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 Vc3S01_A1057 ffe5476eb3a2078f33c9963d456d91dc 181 Pfam PF04336 Acyl carrier protein phosphodiesterase 64 168 7.3E-30 T 12-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 Vc3S01_A1441 a4eb4be25f3bbd77875344bfddef3c43 109 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 44 66 2.2E-6 T 12-10-2018 IPR011889 Bacterial surface protein 26-residue repeat Vc3S01_A1441 a4eb4be25f3bbd77875344bfddef3c43 109 Pfam PF03382 Mycoplasma protein of unknown function, DUF285 32 90 4.7E-22 T 12-10-2018 IPR005046 Protein of unknown function DUF285 Vc3S01_1904 16dd30e00b930542f8bae3c5ecdadcd5 241 Pfam PF12119 Protein of unknown function (DUF3581) 1 217 3.4E-99 T 12-10-2018 IPR021974 Protein of unknown function DUF3581 Vc3S01_A1479 d50546202fbcc9eb0e4ce66b736c60fe 339 Pfam PF02628 Cytochrome oxidase assembly protein 9 315 1.4E-81 T 12-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 Vc3S01_p30134 993fcb474dd47ad004ee253b4793f118 86 Pfam PF01609 Transposase DDE domain 4 67 5.3E-6 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Vc3S01_A0691 91e178b34c2d63fbd83a149e67d3a6b3 299 Pfam PF10124 Mu-like prophage major head subunit gpT 9 296 8.6E-108 T 12-10-2018 IPR018774 Bacteriophage Mu, GpT Vc3S01_2700 a49d255d1cc92d13fbf82fd2864ca23c 113 Pfam PF10973 Protein of unknown function (DUF2799) 28 108 3.3E-22 T 12-10-2018 IPR021242 Protein of unknown function DUF2799 Vc3S01_A0181 15ab2b1c82b702e6556dd113dd3d9d8b 149 SUPERFAMILY SSF55729 14 148 3.38E-24 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Vc3S01_A0181 15ab2b1c82b702e6556dd113dd3d9d8b 149 Gene3D G3DSA:3.40.630.30 7 149 6.1E-38 T 12-10-2018 Vc3S01_A0181 15ab2b1c82b702e6556dd113dd3d9d8b 149 Pfam PF00583 Acetyltransferase (GNAT) family 31 114 6.5E-11 T 12-10-2018 IPR000182 GNAT domain Vc3S01_0010 7ae58d4c92963f0a423269e88d350928 285 Gene3D G3DSA:3.30.40.60 84 175 9.7E-6 T 12-10-2018 Vc3S01_0063 7148c62792633413625f43a817db4c65 151 Pfam PF07681 DoxX 27 108 3.2E-18 T 12-10-2018 IPR032808 DoxX family Vc3S01_0719 08bbec2ab21074e6ef4f8ad3fa15a2c2 99 Gene3D G3DSA:1.10.10.710 21 97 1.8E-7 T 12-10-2018 IPR038627 YebG-like superfamily Vc3S01_0719 08bbec2ab21074e6ef4f8ad3fa15a2c2 99 Pfam PF07130 YebG protein 1 72 1.3E-31 T 12-10-2018 IPR009813 Uncharacterised protein family YebG Vc3S01_3000 994ad1ac8af9b4d70b0730507344bb05 359 SUPERFAMILY SSF53756 9 346 2.83E-77 T 12-10-2018 Vc3S01_3000 994ad1ac8af9b4d70b0730507344bb05 359 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 75 316 2.2E-52 T 12-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 Vc3S01_3000 994ad1ac8af9b4d70b0730507344bb05 359 Gene3D G3DSA:3.40.50.2000 4 157 6.1E-23 T 12-10-2018 Vc3S01_3000 994ad1ac8af9b4d70b0730507344bb05 359 Gene3D G3DSA:3.40.50.2000 160 347 1.9E-34 T 12-10-2018 Vc3S01_0172 bc3107ab436bf8bddc1e35335ad3cd0a 195 Gene3D G3DSA:1.20.1590.10 2 195 1.3E-66 T 12-10-2018 IPR023381 YP001051499.1-like domain superfamily Vc3S01_0172 bc3107ab436bf8bddc1e35335ad3cd0a 195 Pfam PF04222 Protein of unknown function (DUF416) 6 193 4.6E-77 T 12-10-2018 IPR007338 Protein of unknown function DUF416 Vc3S01_2899 d21cf6408c05a5535c8762f57e862910 242 Gene3D G3DSA:3.40.50.300 7 235 2.4E-53 T 12-10-2018 Vc3S01_2899 d21cf6408c05a5535c8762f57e862910 242 SUPERFAMILY SSF52540 31 228 6.41E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_2899 d21cf6408c05a5535c8762f57e862910 242 Pfam PF00005 ABC transporter 30 185 2.8E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Vc3S01_2899 d21cf6408c05a5535c8762f57e862910 242 SMART SM00382 35 233 2.4E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain Vc3S01_0015 95bce57c2b8c9d797a0c53337ef6c371 167 Pfam PF04221 RelB antitoxin 4 70 1.8E-8 T 12-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ Vc3S01_1655 96a17e0ef8abb17be1dc07edd9d98933 57 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 6 45 4.7E-10 T 12-10-2018 IPR008621 Cbb3-type cytochrome oxidase component Vc3S01_A1242 4b5e3cba4dd02735026548087b56acc5 91 Pfam PF03206 Nitrogen fixation protein NifW 8 72 3.0E-5 T 12-10-2018 IPR004893 Nitrogen fixation protein NifW GO:0009399 Vc3S01_1295 a311101e22387196ce985510af7d54c5 47 Pfam PF11665 Protein of unknown function (DUF3265) 20 47 3.7E-13 T 12-10-2018 IPR021681 Protein of unknown function DUF3265 Vc3S01_A0928 c08452593541711ac697ebc92f99c017 1170 SUPERFAMILY SSF75011 906 1164 1.7E-15 T 12-10-2018 Vc3S01_A0928 c08452593541711ac697ebc92f99c017 1170 SUPERFAMILY SSF50969 600 985 4.94E-12 T 12-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like Vc3S01_A0047 65cbd4da80a99e43fcb6735cbbad8dd1 302 Hamap MF_01384 Urease accessory protein UreD [ureD]. 27 286 26.095 T 12-10-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 Vc3S01_A0047 65cbd4da80a99e43fcb6735cbbad8dd1 302 Pfam PF01774 UreD urease accessory protein 74 274 5.3E-42 T 12-10-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 Vc3S01_p30063 6c501109c550979b3499e656a5796612 197 Pfam PF11140 Protein of unknown function (DUF2913) 8 186 1.9E-19 T 12-10-2018 IPR021316 Protein of unknown function DUF2913 Vc3S01_A1355 10a0fa5a8820e204774534872cb360db 785 Pfam PF06934 Fatty acid cis/trans isomerase (CTI) 102 784 1.5E-298 T 12-10-2018 IPR010706 Fatty acid cis-trans isomerase Vc3S01_0392 de20051b88168b8da68a7add569cdd1f 189 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 25 4.3E-4 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Vc3S01_0392 de20051b88168b8da68a7add569cdd1f 189 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 25 1.2E-5 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Vc3S01_p40021 317f77e5c7d98df217ea15b5e474e4de 277 Pfam PF10263 SprT-like family 19 122 1.1E-8 T 12-10-2018 IPR006640 SprT-like Vc3S01_1604 2cf5ea7857b4c448c8dfaed0de54e6ae 436 Pfam PF02321 Outer membrane efflux protein 233 416 1.9E-29 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Vc3S01_1604 2cf5ea7857b4c448c8dfaed0de54e6ae 436 Pfam PF02321 Outer membrane efflux protein 24 201 1.9E-27 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Vc3S01_1604 2cf5ea7857b4c448c8dfaed0de54e6ae 436 Gene3D G3DSA:1.20.1600.10 22 428 1.0E-81 T 12-10-2018 Vc3S01_1604 2cf5ea7857b4c448c8dfaed0de54e6ae 436 SUPERFAMILY SSF56954 23 430 1.06E-86 T 12-10-2018 Vc3S01_1604 2cf5ea7857b4c448c8dfaed0de54e6ae 436 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 22 430 7.0E-120 T 12-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 Vc3S01_p20072 1bb476a5c82f93b990bc673dedfc4a49 193 Pfam PF11140 Protein of unknown function (DUF2913) 8 189 6.4E-21 T 12-10-2018 IPR021316 Protein of unknown function DUF2913 Vc3S01_A0818 416c03a56f92fbcaf1c18a2199cd22be 462 Pfam PF03432 Relaxase/Mobilisation nuclease domain 69 246 1.9E-18 T 12-10-2018 IPR005094 Endonuclease relaxase, MobA/VirD2 Vc3S01_1575 2413c29584e75bbe0f9955f87852473d 583 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 5 581 6.1E-111 T 12-10-2018 IPR010272 Type VI secretion system, TssF-like Vc3S01_1575 2413c29584e75bbe0f9955f87852473d 583 Pfam PF05947 Type VI secretion system, TssF 6 580 4.3E-122 T 12-10-2018 IPR010272 Type VI secretion system, TssF-like Vc3S01_0829 99f66ead09aaf69964a437a26c9e1e0a 67 Pfam PF11446 Protein of unknown function (DUF2897) 5 54 3.9E-21 T 12-10-2018 IPR021550 Protein of unknown function DUF2897 Vc3S01_A0121 a69842ac1bcee28ab835f16222463def 154 SUPERFAMILY SSF56524 30 151 1.57E-13 T 12-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 Vc3S01_1574 9b2ca11cc91c3f9661369b8ffdcc16ff 311 Pfam PF06996 Type VI secretion, TssG 12 296 2.7E-45 T 12-10-2018 IPR010732 Type VI secretion, TssG-like Vc3S01_2254 e65b80a227aeffaa7cada5fe78fbf440 221 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 9 205 7.7E-8 T 12-10-2018 IPR002751 Metal transport protein CbiM/NikMN GO:0000041|GO:0016021 Vc3S01_0234 eb586bc1091e22648705f8b66031feb4 318 SUPERFAMILY SSF64182 5 316 4.19E-44 T 12-10-2018 IPR038763 DHH phosphoesterase superfamily Vc3S01_1282 50463ed788c6dc4c1b79c44ac222e973 458 Pfam PF04317 YcjX-like family, DUF463 20 457 3.4E-189 T 12-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein Vc3S01_1282 50463ed788c6dc4c1b79c44ac222e973 458 PIRSF PIRSF019381 1 458 2.4E-200 T 12-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein Vc3S01_2036 9bf7062933c810874a0a9a3a3a8f502e 78 TIGRFAM TIGR02647 DNA: TIGR02647 family protein 1 77 6.8E-42 T 12-10-2018 IPR013468 Conserved hypothetical protein CHP02647 Vc3S01_2036 9bf7062933c810874a0a9a3a3a8f502e 78 Pfam PF06146 Phosphate-starvation-inducible E 8 68 6.8E-10 T 12-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like Vc3S01_A1916 823be7505845727cbb1284278fbd0d33 362 Gene3D G3DSA:2.40.160.10 25 362 4.8E-59 T 12-10-2018 IPR023614 Porin domain superfamily Vc3S01_A1916 823be7505845727cbb1284278fbd0d33 362 SUPERFAMILY SSF56935 27 362 6.41E-49 T 12-10-2018 Vc3S01_1375 c654f085b2ce2589c2350467d8d5e2b3 265 Pfam PF11185 Protein of unknown function (DUF2971) 122 192 5.0E-7 T 12-10-2018 IPR021352 Protein of unknown function DUF2971 Vc3S01_A1133 e3eec8386daa80e3f82cc279c4e181ac 463 TIGRFAM TIGR00797 matE: MATE efflux family protein 22 420 1.2E-55 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Vc3S01_A1133 e3eec8386daa80e3f82cc279c4e181ac 463 Pfam PF01554 MatE 22 181 9.4E-35 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Vc3S01_A1133 e3eec8386daa80e3f82cc279c4e181ac 463 Pfam PF01554 MatE 249 411 3.3E-16 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Vc3S01_A1133 e3eec8386daa80e3f82cc279c4e181ac 463 PIRSF PIRSF006603 2 460 4.0E-71 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Vc3S01_1426 58cd7ee6be16e7dcd958b8b735b7bd17 163 SUPERFAMILY SSF54523 7 115 1.41E-12 T 12-10-2018 Vc3S01_1426 58cd7ee6be16e7dcd958b8b735b7bd17 163 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 27 1.8E-8 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Vc3S01_1426 58cd7ee6be16e7dcd958b8b735b7bd17 163 Gene3D G3DSA:3.30.700.10 7 99 1.3E-10 T 12-10-2018 Vc3S01_1426 58cd7ee6be16e7dcd958b8b735b7bd17 163 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 1.2E-7 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Vc3S01_1340 7d554cc99a39a41d5697ba70de893235 197 SUPERFAMILY SSF158668 73 112 8.37E-5 T 12-10-2018 IPR038026 MtlR-like superfamily Vc3S01_A1955 b931c35e07acad778231a19933fdb347 663 Pfam PF01136 Peptidase family U32 444 605 4.8E-8 T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 Vc3S01_A1955 b931c35e07acad778231a19933fdb347 663 Pfam PF01136 Peptidase family U32 78 293 7.2E-64 T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 Vc3S01_2892 c12531801701568dd6f62fbf2250e52d 1290 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 955 1289 4.3E-67 T 12-10-2018 IPR007452 Translocation and assembly module TamB Vc3S01_A0212 97e7630b55db3609e6c3a313ea97e904 455 PIRSF PIRSF037714 1 450 2.9E-154 T 12-10-2018 IPR017270 Putative MotA/TolQ/ExbB family protein Vc3S01_A0212 97e7630b55db3609e6c3a313ea97e904 455 Pfam PF01618 MotA/TolQ/ExbB proton channel family 305 425 4.7E-31 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Vc3S01_1939 9a207c47636eb5e67972060d1466d892 367 Gene3D G3DSA:3.40.190.10 106 346 6.4E-47 T 12-10-2018 Vc3S01_1939 9a207c47636eb5e67972060d1466d892 367 SUPERFAMILY SSF53850 2 347 7.24E-38 T 12-10-2018 Vc3S01_1939 9a207c47636eb5e67972060d1466d892 367 Gene3D G3DSA:3.40.190.10 10 317 6.4E-47 T 12-10-2018 Vc3S01_1939 9a207c47636eb5e67972060d1466d892 367 Pfam PF13416 Bacterial extracellular solute-binding protein 15 291 5.7E-21 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein Vc3S01_1660 a6c997e2a191273f48b203965212e1f9 216 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 1 204 1.5E-54 T 12-10-2018 IPR039447 Urease accessory protein UreH-like, transmembrane domain Vc3S01_A0378 383a47e4f5430baee36ec7c9790e68ca 311 SUPERFAMILY SSF103481 41 140 3.92E-10 T 12-10-2018 Vc3S01_A0378 383a47e4f5430baee36ec7c9790e68ca 311 Pfam PF00892 EamA-like transporter family 153 286 7.6E-10 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Vc3S01_A0378 383a47e4f5430baee36ec7c9790e68ca 311 Pfam PF00892 EamA-like transporter family 6 136 1.4E-12 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Vc3S01_A0378 383a47e4f5430baee36ec7c9790e68ca 311 SUPERFAMILY SSF103481 182 286 1.16E-8 T 12-10-2018 Vc3S01_0232 a4d4f440988edc442836f587b21ab6e3 124 Pfam PF04892 VanZ like family 33 109 7.4E-11 T 12-10-2018 IPR006976 VanZ-like Vc3S01_A1637 b8a9287aef25c8985d69d4512e26039f 236 SUPERFAMILY SSF55681 4 233 6.66E-46 T 12-10-2018 Vc3S01_A1637 b8a9287aef25c8985d69d4512e26039f 236 Gene3D G3DSA:3.30.930.10 5 236 1.1E-40 T 12-10-2018 Vc3S01_A0722 74edab4c9eea2fe1eaacf8fea6e77df9 204 SUPERFAMILY SSF53335 31 133 6.16E-14 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Vc3S01_A0722 74edab4c9eea2fe1eaacf8fea6e77df9 204 Pfam PF13649 Methyltransferase domain 54 143 1.5E-9 T 12-10-2018 Vc3S01_A0722 74edab4c9eea2fe1eaacf8fea6e77df9 204 Gene3D G3DSA:3.40.50.150 13 150 9.4E-14 T 12-10-2018 Vc3S01_A0203 1dcd45977930bf73b6c1f36a3346c122 118 Gene3D G3DSA:3.30.1370.150 59 118 4.5E-29 T 12-10-2018 Vc3S01_A0203 1dcd45977930bf73b6c1f36a3346c122 118 Pfam PF10928 Protein of unknown function (DUF2810) 65 116 2.2E-29 T 12-10-2018 IPR021230 Protein of unknown function DUF2810 Vc3S01_p30111 88975630217fb280905c44e0b07d52ac 102 Pfam PF14319 Transposase zinc-binding domain 14 102 1.9E-20 T 12-10-2018 IPR026889 Transposase zinc-binding domain Vc3S01_A1840 cd83e1f540bcf3f363b58e280ac19f8c 109 Pfam PF01914 MarC family integral membrane protein 8 104 5.4E-30 T 12-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 Vc3S01_2454 99af7c11474d9a992590d45b40fc3103 249 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 9 249 28.342 T 12-10-2018 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 Vc3S01_2454 99af7c11474d9a992590d45b40fc3103 249 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 15 231 1.2E-40 T 12-10-2018 Vc3S01_A1506 f98e6dec24c1fd07e98bfa6d92e242af 223 Pfam PF06912 Protein of unknown function (DUF1275) 13 208 4.0E-30 T 12-10-2018 IPR010699 Protein of unknown function DUF1275 Vc3S01_0357 2caf13c07152b05355c298e3ecdae027 372 Pfam PF00589 Phage integrase family 211 344 4.9E-16 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Vc3S01_0357 2caf13c07152b05355c298e3ecdae027 372 SUPERFAMILY SSF56349 67 351 2.06E-42 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Vc3S01_0357 2caf13c07152b05355c298e3ecdae027 372 Gene3D G3DSA:1.10.443.10 183 369 6.2E-26 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Vc3S01_1276 b9b84a07054294eef6e4ed0fcdadddac 199 Pfam PF00293 NUDIX domain 37 159 2.2E-13 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Vc3S01_1276 b9b84a07054294eef6e4ed0fcdadddac 199 SUPERFAMILY SSF55811 37 189 4.6E-35 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Vc3S01_1276 b9b84a07054294eef6e4ed0fcdadddac 199 Gene3D G3DSA:3.90.79.10 19 195 6.5E-48 T 12-10-2018 Vc3S01_2096 8d206c574a55660e80444fc1afe4a95a 404 Pfam PF12358 Protein of unknown function (DUF3644) 121 199 8.5E-11 T 12-10-2018 IPR022104 Protein of unknown function DUF3644 Vc3S01_p40006 944d973ffac9167936254fcd30cb569f 253 Gene3D G3DSA:1.20.81.30 122 225 3.2E-5 T 12-10-2018 Vc3S01_0688 1c121a6ad284ad50d425d64c3fffbb6e 480 Gene3D G3DSA:1.20.1740.10 13 476 1.4E-8 T 12-10-2018 Vc3S01_0688 1c121a6ad284ad50d425d64c3fffbb6e 480 PIRSF PIRSF006060 1 478 1.0E-40 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Vc3S01_0688 1c121a6ad284ad50d425d64c3fffbb6e 480 Pfam PF13520 Amino acid permease 11 443 1.5E-29 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Vc3S01_A1580 0e53424a8fec0809a53a37a185eb222c 293 Gene3D G3DSA:1.10.3720.10 51 292 1.3E-56 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_A1580 0e53424a8fec0809a53a37a185eb222c 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 102 292 5.6E-16 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Vc3S01_A1580 0e53424a8fec0809a53a37a185eb222c 293 SUPERFAMILY SSF161098 55 281 1.57E-49 T 12-10-2018 IPR035906 MetI-like superfamily Vc3S01_2980 1f48f3e79c7c63ef171ae26040a47926 477 Pfam PF13440 Polysaccharide biosynthesis protein 32 322 3.8E-92 T 12-10-2018 Vc3S01_2216 d5d4e2e3b8c06ae9c2128489ac96284a 268 Pfam PF02698 DUF218 domain 80 242 3.0E-28 T 12-10-2018 IPR003848 Domain of unknown function DUF218 Vc3S01_A0852 6d154ecdd83b7cf9ad2826312b1aebc0 474 Pfam PF05226 CHASE2 domain 26 338 4.3E-15 T 12-10-2018 IPR007890 CHASE2 Vc3S01_0317 dac8a71af69c8eda6cb0e0bc43c3ef03 191 Pfam PF05137 Fimbrial assembly protein (PilN) 103 177 2.2E-11 T 12-10-2018 IPR007813 Fimbrial assembly PilN Vc3S01_1027 1f2b8b8b51ba867e2aae5da61ee0e846 60 Pfam PF05509 TraY domain 12 59 7.9E-22 T 12-10-2018 IPR008876 Relaxosome protein TraY GO:0000746|GO:0003677 Vc3S01_1626 af80c3d48009aedafd8ba93762341653 845 Pfam PF02470 MlaD protein 359 424 1.1E-5 T 12-10-2018 IPR003399 Mce/MlaD Vc3S01_1626 af80c3d48009aedafd8ba93762341653 845 Pfam PF02470 MlaD protein 124 183 1.2E-5 T 12-10-2018 IPR003399 Mce/MlaD Vc3S01_1626 af80c3d48009aedafd8ba93762341653 845 Pfam PF02470 MlaD protein 714 774 3.7E-7 T 12-10-2018 IPR003399 Mce/MlaD Vc3S01_1626 af80c3d48009aedafd8ba93762341653 845 Pfam PF02470 MlaD protein 243 317 4.0E-6 T 12-10-2018 IPR003399 Mce/MlaD Vc3S01_1626 af80c3d48009aedafd8ba93762341653 845 Pfam PF02470 MlaD protein 608 695 1.4E-6 T 12-10-2018 IPR003399 Mce/MlaD Vc3S01_1626 af80c3d48009aedafd8ba93762341653 845 Pfam PF02470 MlaD protein 8 99 7.3E-13 T 12-10-2018 IPR003399 Mce/MlaD Vc3S01_A0546 af8b651372d6fa7c0df9068bda9cf4f3 54 Pfam PF01679 Proteolipid membrane potential modulator 6 52 2.3E-20 T 12-10-2018 IPR000612 Proteolipid membrane potential modulator GO:0016021 Vc3S01_A0546 af8b651372d6fa7c0df9068bda9cf4f3 54 ProSitePatterns PS01309 Uncharacterized protein family UPF0057 signature. 10 25 - T 12-10-2018 IPR000612 Proteolipid membrane potential modulator GO:0016021 Vc3S01_p20176 34fdc4666429dc122471e526f6ee9a6f 993 Pfam PF13700 Domain of unknown function (DUF4158) 9 172 6.5E-31 T 12-10-2018 IPR025296 Domain of unknown function DUF4158 Vc3S01_p20176 34fdc4666429dc122471e526f6ee9a6f 993 Pfam PF01526 Tn3 transposase DDE domain 582 972 3.7E-120 T 12-10-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 Vc3S01_p30103 d4c6c9ca24a28d27ee66d7f847d98574 60 Pfam PF05509 TraY domain 12 58 2.2E-22 T 12-10-2018 IPR008876 Relaxosome protein TraY GO:0000746|GO:0003677 Vc3S01_p30103 d4c6c9ca24a28d27ee66d7f847d98574 60 SUPERFAMILY SSF47598 15 51 7.41E-5 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Vc3S01_A0695 0f890534cc5527525df9edd38e337d78 144 Pfam PF07030 Protein of unknown function (DUF1320) 4 125 5.5E-32 T 12-10-2018 IPR009752 Bacteriophage Mu, Gp36 Vc3S01_1716 c4e27136a06f0452102f992217206dc1 456 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 421 6.7E-122 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Vc3S01_1716 c4e27136a06f0452102f992217206dc1 456 PIRSF PIRSF006603 5 454 4.9E-61 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Vc3S01_1716 c4e27136a06f0452102f992217206dc1 456 Pfam PF01554 MatE 17 176 1.4E-35 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Vc3S01_1716 c4e27136a06f0452102f992217206dc1 456 Pfam PF01554 MatE 243 404 3.8E-39 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Vc3S01_A0164 327c29e1de29f51f996b6ecbae40a20c 416 Gene3D G3DSA:3.40.50.720 4 124 3.7E-5 T 12-10-2018 Vc3S01_A1311 9218579c9b1ae703499fb7e0de8436d7 4305 SMART SM00564 3414 3446 150.0 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Vc3S01_A1311 9218579c9b1ae703499fb7e0de8436d7 4305 SMART SM00564 3612 3644 130.0 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Vc3S01_A1311 9218579c9b1ae703499fb7e0de8436d7 4305 SMART SM00564 3810 3842 160.0 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Vc3S01_A1311 9218579c9b1ae703499fb7e0de8436d7 4305 SMART SM00564 4008 4040 150.0 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Vc3S01_A1311 9218579c9b1ae703499fb7e0de8436d7 4305 SMART SM00564 3216 3248 130.0 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Vc3S01_A1311 9218579c9b1ae703499fb7e0de8436d7 4305 SMART SM00564 2622 2654 130.0 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Vc3S01_A1311 9218579c9b1ae703499fb7e0de8436d7 4305 SMART SM00564 3018 3050 160.0 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Vc3S01_A1311 9218579c9b1ae703499fb7e0de8436d7 4305 SMART SM00564 2820 2852 130.0 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Vc3S01_0117 828f43d3fd7fa6da14e170d3a4160e1a 206 Pfam PF07947 YhhN family 26 204 4.8E-32 T 12-10-2018 IPR012506 YhhN-like GO:0016021 Vc3S01_A1822 8ac29d9c7aac0de46f98ede2dbec16f6 147 Pfam PF06271 RDD family 6 141 1.4E-16 T 12-10-2018 IPR010432 RDD Vc3S01_p10008 62afa4a3eceb8d054eb73fc72ba90cc5 224 Gene3D G3DSA:2.40.50.140 6 83 7.0E-7 T 12-10-2018 Vc3S01_A1913 ba4b79d497c1d6c626ff063c68b5d783 513 Pfam PF00474 Sodium:solute symporter family 34 425 5.8E-51 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Vc3S01_A1913 ba4b79d497c1d6c626ff063c68b5d783 513 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 34 425 8.2E-74 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Vc3S01_A1913 ba4b79d497c1d6c626ff063c68b5d783 513 Gene3D G3DSA:1.20.1730.10 22 511 6.4E-105 T 12-10-2018 IPR038377 Sodium/glucose symporter superfamily Vc3S01_A1051 ec8c25370e96f56c21999c906ac37340 157 PIRSF PIRSF003174 1 154 6.8E-49 T 12-10-2018 IPR010292 Uncharacterised protein family CreA Vc3S01_A1051 ec8c25370e96f56c21999c906ac37340 157 Pfam PF05981 CreA protein 22 144 1.2E-43 T 12-10-2018 IPR010292 Uncharacterised protein family CreA Vc3S01_A0779 837988cb801bf815181197cc10d17bc0 594 SUPERFAMILY SSF101898 292 477 7.59E-6 T 12-10-2018 Vc3S01_2619 ad9b53627c289eb9b3a630a9c487f17d 522 Pfam PF03553 Na+/H+ antiporter family 176 485 1.2E-50 T 12-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 Vc3S01_A2014 63bb030df49091fb88c5274e57e6315b 197 Pfam PF07007 Lysozyme inhibitor LprI 28 108 1.7E-5 T 12-10-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal Vc3S01_A0081 04808c7b9ce6ee891e956c1e92273ee6 78 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 5 63 3.1E-6 T 12-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 Vc3S01_A0081 04808c7b9ce6ee891e956c1e92273ee6 78 SUPERFAMILY SSF51316 1 77 1.88E-15 T 12-10-2018 IPR011057 Mss4-like superfamily Vc3S01_A0081 04808c7b9ce6ee891e956c1e92273ee6 78 Gene3D G3DSA:2.170.150.70 1 78 3.2E-20 T 12-10-2018 Vc3S01_A0608 5c848fc5c6c89b6ef0606abad527606f 148 Pfam PF11911 Protein of unknown function (DUF3429) 6 146 5.2E-28 T 12-10-2018 IPR021836 Protein of unknown function DUF3429 Vc3S01_A1884 660ae232f4a381a5af7ed28776bd0952 249 Pfam PF01925 Sulfite exporter TauE/SafE 12 239 2.2E-31 T 12-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 Vc3S01_A1153 4fecef12e41fd6d1512c4da0e99fdbfd 337 Pfam PF11168 Protein of unknown function (DUF2955) 14 153 2.8E-31 T 12-10-2018 IPR022604 Protein of unknown function DUF2955 Vc3S01_1698 eb9663b80d484f61a9c0a2a9bc539f82 88 Pfam PF11173 Protein of unknown function (DUF2960) 1 77 2.4E-36 T 12-10-2018 IPR021343 Protein of unknown function DUF2960 Vc3S01_A1949 c1c25c0acfd04fae5c4d65b3b532cae9 142 Gene3D G3DSA:1.20.120.1490 36 141 1.6E-15 T 12-10-2018 Vc3S01_A1949 c1c25c0acfd04fae5c4d65b3b532cae9 142 Pfam PF07813 LTXXQ motif family protein 37 126 1.2E-9 T 12-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 Vc3S01_2532 cd491ac68d2b1278cbb13c1675c7cf79 200 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 11 187 4.9E-34 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT Vc3S01_A1007 289490c4f1419473c4ec9976353be1ea 86 Gene3D G3DSA:1.20.120.1930 1 86 2.8E-38 T 12-10-2018 Vc3S01_A1007 289490c4f1419473c4ec9976353be1ea 86 Pfam PF16691 Domain of unknown function (DUF5062) 6 86 1.8E-30 T 12-10-2018 IPR032036 Protein of unknown function DUF5062 Vc3S01_p20173 b941eb8491f2f6fee89338e8552cd6b9 307 Pfam PF04986 Putative transposase 1 203 6.9E-45 T 12-10-2018 IPR007069 Transposase, IS801/IS1294 GO:0003677|GO:0004803|GO:0006313 Vc3S01_A1138 3c3193680444ddbc1da690fbf28da78a 133 Pfam PF04143 Sulphur transport 2 127 4.0E-7 T 12-10-2018 IPR007272 Sulphur transport domain Vc3S01_1524 a90df1c9a1376fd7913913a1b5340800 308 Pfam PF03547 Membrane transport protein 163 303 6.9E-8 T 12-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 Vc3S01_1524 a90df1c9a1376fd7913913a1b5340800 308 Pfam PF03547 Membrane transport protein 3 152 2.4E-12 T 12-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 Vc3S01_2432 2237439dd454a723dd3c79670c3d90b2 263 Pfam PF07556 Protein of unknown function (DUF1538) 21 246 5.6E-70 T 12-10-2018 IPR011435 Protein of unknown function DUF1538 Vc3S01_A1426 6859be855e26bbac9974dd8899a87117 168 Pfam PF16964 Putative tight adherence pilin protein F 2 168 2.8E-24 T 12-10-2018 IPR031582 Putative tight adherence pilin protein F Vc3S01_0175 a4432351ceba3a7d817c4920ae022e6e 232 PIRSF PIRSF028160 1 232 8.6E-121 T 12-10-2018 IPR016872 Uncharacterised conserved protein UCP028160 Vc3S01_0175 a4432351ceba3a7d817c4920ae022e6e 232 Pfam PF07356 Protein of unknown function (DUF1481) 34 228 1.6E-59 T 12-10-2018 IPR010858 Protein of unknown function DUF1481 Vc3S01_A0492 9209cbed62bb21a496e6177662fcbf46 282 Pfam PF00924 Mechanosensitive ion channel 60 183 1.1E-15 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 Vc3S01_A0492 9209cbed62bb21a496e6177662fcbf46 282 SUPERFAMILY SSF50182 96 169 5.23E-10 T 12-10-2018 IPR010920 LSM domain superfamily Vc3S01_A1555 97dbc4c1d9a7505dc035da36139ce44a 176 Gene3D G3DSA:2.40.128.130 45 175 8.8E-6 T 12-10-2018 IPR036709 Autotransporter beta-domain superfamily Vc3S01_A1555 97dbc4c1d9a7505dc035da36139ce44a 176 SUPERFAMILY SSF103515 40 146 3.14E-8 T 12-10-2018 IPR036709 Autotransporter beta-domain superfamily Vc3S01_0088 937f3e67e7c46e29a925e4e81cba3b66 403 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 63 391 5.5E-105 T 12-10-2018 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX Vc3S01_1495 aed02e821a2910316245bcb2450d6438 469 PIRSF PIRSF006603 15 462 7.3E-65 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Vc3S01_1495 aed02e821a2910316245bcb2450d6438 469 TIGRFAM TIGR00797 matE: MATE efflux family protein 24 427 7.3E-97 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Vc3S01_1495 aed02e821a2910316245bcb2450d6438 469 Pfam PF01554 MatE 24 183 1.1E-31 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Vc3S01_1495 aed02e821a2910316245bcb2450d6438 469 Pfam PF01554 MatE 249 409 2.4E-33 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Vc3S01_p10069 9cbefcd3b53e3cffab940cd9c29537a9 165 Gene3D G3DSA:1.20.81.30 13 102 7.5E-8 T 12-10-2018 Vc3S01_A0862 6a2c96f19849961990103ccbd932fac7 109 SUPERFAMILY SSF46626 8 98 6.3E-20 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Vc3S01_A0862 6a2c96f19849961990103ccbd932fac7 109 Gene3D G3DSA:1.10.760.10 16 98 4.9E-23 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Vc3S01_A0862 6a2c96f19849961990103ccbd932fac7 109 Pfam PF00034 Cytochrome c 25 96 1.0E-7 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Vc3S01_2861 a623c11cd6f9f7003ee13cc8f034012f 260 Pfam PF04784 Protein of unknown function, DUF547 88 198 4.5E-23 T 12-10-2018 IPR006869 Domain of unknown function DUF547 Vc3S01_0439 51c2f79374472cec27870026a466364f 132 Pfam PF09834 Predicted membrane protein (DUF2061) 66 115 3.7E-20 T 12-10-2018 IPR018638 Domain of unknown function DUF2061, membrane Vc3S01_0439 51c2f79374472cec27870026a466364f 132 Pfam PF09834 Predicted membrane protein (DUF2061) 1 52 6.3E-21 T 12-10-2018 IPR018638 Domain of unknown function DUF2061, membrane Vc3S01_2818 8f9d6025a8d3b7ac641cbe2cfe2e1ccf 240 Pfam PF16537 Type II secretion system protein B 175 234 2.9E-25 T 12-10-2018 IPR032389 Type II secretion system protein B Vc3S01_p20181 7e1a30329960214a64ab8fca434dd994 587 Pfam PF07693 KAP family P-loop domain 16 383 1.3E-45 T 12-10-2018 IPR011646 KAP family P-loop domain Vc3S01_p20181 7e1a30329960214a64ab8fca434dd994 587 SUPERFAMILY SSF52540 11 289 7.46E-9 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_3179 562f0c91ba5cc177cf14ad79825689df 212 Pfam PF11355 Protein of unknown function (DUF3157) 2 211 4.9E-64 T 12-10-2018 IPR021501 Protein of unknown function DUF3157 Vc3S01_2243 eb8708c8698452b121a7cd946c054bfd 54 Pfam PF10689 Protein of unknown function (DUF2496) 8 50 8.4E-24 T 12-10-2018 IPR019630 Protein of unknown function DUF2496, YbaM-related Vc3S01_2815 303cfa522fabe9423e0aac4e148951dd 419 Pfam PF01384 Phosphate transporter family 26 407 1.5E-112 T 12-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 Vc3S01_p40106 626fadc87c75513f357955c7b6586ab9 333 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 45 263 5.5E-33 T 12-10-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 Vc3S01_0952 ef3d5dfd66212ab00cdddd7c98c463f6 273 Pfam PF11207 Protein of unknown function (DUF2989) 16 218 7.7E-75 T 12-10-2018 IPR021372 Protein of unknown function DUF2989 Vc3S01_p30088 cecde997f99dea8ab86e1fb7a9debe83 592 Gene3D G3DSA:3.40.50.300 343 571 2.9E-37 T 12-10-2018 Vc3S01_p30088 cecde997f99dea8ab86e1fb7a9debe83 592 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 127 576 3.6E-92 T 12-10-2018 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 Vc3S01_p30088 cecde997f99dea8ab86e1fb7a9debe83 592 SUPERFAMILY SSF52540 116 578 2.5E-37 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0834 9e3c9e1009153911426a5c7b5493d9bf 110 Pfam PF13698 Domain of unknown function (DUF4156) 26 109 1.4E-22 T 12-10-2018 IPR025294 Protein of unknown function DUF4156 Vc3S01_0687 5d3182273649297dbab2c699db86b2fb 351 SUPERFAMILY SSF56935 38 350 6.87E-10 T 12-10-2018 Vc3S01_A0896 e64c24b2a2f9c4e270813427e919541a 243 Pfam PF12525 Protein of unknown function (DUF3726) 3 78 1.2E-25 T 12-10-2018 IPR022201 Protein of unknown function DUF3726 Vc3S01_A0896 e64c24b2a2f9c4e270813427e919541a 243 SUPERFAMILY SSF89733 1 132 1.44E-5 T 12-10-2018 IPR036111 Malate/L-sulfolactate/L-lactate dehydrogenase-like superfamily GO:0016491|GO:0055114 Vc3S01_A1752 72b98ae7128c5c4d986cfb30a7cc515c 115 Gene3D G3DSA:3.10.180.10 9 114 1.2E-15 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Vc3S01_A1752 72b98ae7128c5c4d986cfb30a7cc515c 115 SUPERFAMILY SSF54593 12 113 4.51E-16 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Vc3S01_0729 3e9db2587113380bda9ae6fd83a8b247 151 Pfam PF11012 Protein of unknown function (DUF2850) 65 142 2.6E-29 T 12-10-2018 IPR021271 Protein of unknown function DUF2850 Vc3S01_2033 44b7192bdb81bcd33243cd9b0e9e8438 266 Pfam PF03649 Uncharacterised protein family (UPF0014) 9 245 3.9E-73 T 12-10-2018 IPR005226 UPF0014 family Vc3S01_A0036 2df7246ff08a849bce5e5cb25e78f90e 453 Gene3D G3DSA:1.25.40.10 53 284 5.2E-12 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_A0036 2df7246ff08a849bce5e5cb25e78f90e 453 SUPERFAMILY SSF48452 90 259 2.4E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Vc3S01_2832 2abdd14ac1708cae2551afc02cb4987b 348 Pfam PF14321 Domain of unknown function (DUF4382) 31 190 7.4E-21 T 12-10-2018 IPR025491 Domain of unknown function DUF4382 Vc3S01_1830 42fac9e1e31dd7552e378e84d66a85a3 333 Pfam PF11168 Protein of unknown function (DUF2955) 12 147 2.3E-20 T 12-10-2018 IPR022604 Protein of unknown function DUF2955 Vc3S01_3132 67f6972fb8e65d0a76599a1a101a4131 565 Pfam PF10088 Uncharacterised protein conserved in bacteria (DUF2326) 433 558 1.9E-18 T 12-10-2018 IPR018760 Protein of unknown function DUF2326 Vc3S01_p30095 32d8c17a2cdd2799e52ac5093684c62c 318 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 36 251 6.2E-33 T 12-10-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 Vc3S01_2990 3792198d93fb2a8b5111d57dd09dc2d4 244 Pfam PF06251 Capsule biosynthesis GfcC 29 239 2.5E-19 T 12-10-2018 IPR010425 Domain of unknown function DUF1017 Vc3S01_0009 88a15cc907c914a8e8dcda0a0ffebad2 341 PIRSF PIRSF015268 5 341 1.1E-145 T 12-10-2018 IPR011204 Virulence protein RhuM-like Vc3S01_0009 88a15cc907c914a8e8dcda0a0ffebad2 341 Pfam PF13310 Virulence protein RhuM family 69 319 1.5E-109 T 12-10-2018 IPR011204 Virulence protein RhuM-like Vc3S01_0670 16f12940b31f800886e381ea1edbb37e 162 Pfam PF01478 Type IV leader peptidase family 5 107 1.8E-15 T 12-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 Vc3S01_0670 16f12940b31f800886e381ea1edbb37e 162 Gene3D G3DSA:1.20.120.1220 2 147 1.1E-6 T 12-10-2018 Vc3S01_A0717 41c8f7bcf69c6032e93e2cfa41c7c526 365 SUPERFAMILY SSF53822 27 364 8.17E-87 T 12-10-2018 IPR028082 Periplasmic binding protein-like I Vc3S01_A0717 41c8f7bcf69c6032e93e2cfa41c7c526 365 Gene3D G3DSA:3.40.50.2300 33 363 4.5E-151 T 12-10-2018 Vc3S01_A0717 41c8f7bcf69c6032e93e2cfa41c7c526 365 Gene3D G3DSA:3.40.50.2300 180 359 4.5E-151 T 12-10-2018 Vc3S01_A0717 41c8f7bcf69c6032e93e2cfa41c7c526 365 Pfam PF13407 Periplasmic binding protein domain 69 322 2.8E-15 T 12-10-2018 IPR025997 Periplasmic binding protein Vc3S01_p20195 5e7ec53c05ac3d906f31150cb335359c 1007 SUPERFAMILY SSF52540 438 890 6.13E-6 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_1539 a8a717d5c6c00bfaaddb7f56f517390e 379 Pfam PF13289 SIR2-like domain 117 339 2.4E-11 T 12-10-2018 IPR039444 SIR2-like domain Vc3S01_A2005 eac03c493ebbb34ccc63e0ce3eacb41e 170 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 24 154 1.8E-28 T 12-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ Vc3S01_p20126 c2032581f003c4b6c4e89879283cb75b 194 SUPERFAMILY SSF54523 64 191 5.89E-6 T 12-10-2018 Vc3S01_p20126 c2032581f003c4b6c4e89879283cb75b 194 Gene3D G3DSA:3.30.1690.10 51 193 8.5E-12 T 12-10-2018 Vc3S01_A1372 64d6fdea29fbab561af9071c675396ba 51 Pfam PF11216 Protein of unknown function (DUF3012) 20 51 1.9E-22 T 12-10-2018 IPR021379 Protein of unknown function DUF3012 Vc3S01_A0025 ce3e1d722c08f1f3fa734277099171e7 211 Pfam PF10026 Predicted Zn-dependent protease (DUF2268) 23 210 7.9E-41 T 12-10-2018 IPR018728 Domain of unknown function DUF2268 Vc3S01_1572 a558f4a41fddf33072e29c22aca9342c 267 SUPERFAMILY SSF53850 61 264 4.19E-18 T 12-10-2018 Vc3S01_1572 a558f4a41fddf33072e29c22aca9342c 267 Gene3D G3DSA:3.40.190.10 68 264 2.5E-7 T 12-10-2018 Vc3S01_1572 a558f4a41fddf33072e29c22aca9342c 267 Gene3D G3DSA:3.40.190.10 144 236 2.5E-7 T 12-10-2018 Vc3S01_1892 5b46d01785a81c6e31122a71ecdd6e5d 247 Pfam PF07070 SpoOM protein 2 215 1.7E-63 T 12-10-2018 IPR009776 Sporulation stage 0, protein M Vc3S01_p10084 955739dbeb1c2670ff640715425ddfd8 109 Pfam PF04956 TrbC/VIRB2 family 6 100 1.4E-18 T 12-10-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 Vc3S01_p20015 9e22c181fa314fb0ce14052ac0235135 358 Pfam PF12293 Putative outer membrane core complex of type IVb secretion 114 335 4.1E-22 T 12-10-2018 IPR022073 Putative outer membrane core complex of type IVb secretion Vc3S01_A0239 a0898c55959aa2daaa5db49cbaf53cf4 112 Pfam PF04320 Protein with unknown function (DUF469) 11 111 1.9E-32 T 12-10-2018 IPR007416 Protein of unknown function DUF469 Vc3S01_0808 04a74d3f07a37e56bd52b093fdf6f590 130 Pfam PF07087 Protein of unknown function (DUF1353) 40 115 5.0E-10 T 12-10-2018 IPR010767 Campylobacter phage CGC-2007, Cje0229 Vc3S01_0119 537433579337490bb83a97d98b136297 194 Pfam PF01914 MarC family integral membrane protein 3 192 5.0E-54 T 12-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 Vc3S01_0119 537433579337490bb83a97d98b136297 194 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 6 189 3.3E-30 T 12-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 Vc3S01_0120 089a30e0fb09c89a93f5083e38ba2227 88 Pfam PF06611 Protein of unknown function (DUF1145) 4 59 2.5E-18 T 12-10-2018 IPR009525 Protein of unknown function DUF1145 Vc3S01_A0700 76c09ed9a43ae25ced75efc6cb38f1f4 117 Pfam PF10618 Phage tail tube protein 1 115 9.6E-33 T 12-10-2018 IPR019596 Bacteriophage Mu, GpM, tail tube Vc3S01_0860 3ab00f791641aa4137ed7a73eb7a6a48 166 Pfam PF03748 Flagellar basal body-associated protein FliL 65 166 3.7E-19 T 12-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 Vc3S01_A0683 9bbbd0a3c4d527eff4b7dcbb7cd21a95 192 Pfam PF11985 Protein of unknown function (DUF3486) 7 190 3.8E-54 T 12-10-2018 IPR021874 Bacteriophage Mu, Gp27 Vc3S01_A0020 5e5b1b0ece79b3f91a5e7e5b0db0947e 422 Pfam PF02687 FtsX-like permease family 315 411 5.7E-10 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Vc3S01_A0020 5e5b1b0ece79b3f91a5e7e5b0db0947e 422 Pfam PF12704 MacB-like periplasmic core domain 23 245 8.5E-16 T 12-10-2018 IPR025857 MacB-like periplasmic core domain Vc3S01_0801 de0da62308a3b2d7880a0374a295d977 228 Pfam PF06930 Protein of unknown function (DUF1282) 14 223 2.6E-42 T 12-10-2018 IPR009698 Protein of unknown function DUF1282 Vc3S01_3108 f4b06cd9234be2727eadbe0f03d5fbd3 89 Pfam PF10625 Universal stress protein B (UspB) 1 88 4.8E-42 T 12-10-2018 IPR019598 Universal stress protein B Vc3S01_2296 8ac3649594c180f73359cbb82aff629b 94 Pfam PF13505 Outer membrane protein beta-barrel domain 6 90 1.9E-10 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel Vc3S01_0557 5dcd527019d15446e3c95de47ed63e60 140 SUPERFAMILY SSF57997 3 122 2.75E-23 T 12-10-2018 Vc3S01_p30141 66a7f5b6efcf1f652efd14a68d89cbe9 100 ProDom PD115044 PRECURSOR SIGNAL 3'REGION PLASMID CS5 9 79 9.0E-6 T 12-10-2018 Vc3S01_0876 f2b9da20614d6c2bd66bd1f6b0257407 259 SUPERFAMILY SSF52540 1 252 2.01E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_0876 f2b9da20614d6c2bd66bd1f6b0257407 259 Gene3D G3DSA:3.40.50.300 1 254 3.4E-66 T 12-10-2018 Vc3S01_0876 f2b9da20614d6c2bd66bd1f6b0257407 259 Pfam PF13614 AAA domain 4 174 6.9E-50 T 12-10-2018 IPR025669 AAA domain Vc3S01_p20135 5d689990e964c88c36099a74cdae5fef 309 Pfam PF16932 Type IV secretory system, conjugal DNA-protein transfer 52 269 1.1E-25 T 12-10-2018 IPR031618 Putative type IV secretory system protein Vc3S01_A0638 109d3c865116c67c55fdc093e22b7d0e 201 Gene3D G3DSA:1.10.260.40 1 71 9.9E-18 T 12-10-2018 Vc3S01_A0638 109d3c865116c67c55fdc093e22b7d0e 201 Pfam PF07022 Bacteriophage CI repressor helix-turn-helix domain 7 68 8.5E-10 T 12-10-2018 IPR010744 Bacteriophage CI repressor GO:0003677|GO:0045892 Vc3S01_0066 e01790038b1e8cca3523366de5a088ba 86 Pfam PF10048 Predicted integral membrane protein (DUF2282) 33 82 1.9E-23 T 12-10-2018 IPR018740 Protein of unknown function DUF2282, integral membrane Vc3S01_1717 2fdb526ac1fea8a5090abf48c37ff7d1 338 Pfam PF11279 Protein of unknown function (DUF3080) 31 334 1.1E-84 T 12-10-2018 IPR021431 Protein of unknown function DUF3080 Vc3S01_p40023 d97e12614e513c52277781a6c53c9025 193 SUPERFAMILY SSF56935 15 191 1.43E-5 T 12-10-2018 Vc3S01_0338 2fdfe1a3f88991f200c5e39e5f0be5da 81 Pfam PF11112 Pyocin activator protein PrtN 9 77 1.9E-22 T 12-10-2018 IPR020518 Transcription regulator PrtN GO:0006355 Vc3S01_A0804 eb1bb88e62767623c7db8d318e18d5b1 661 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 179 328 1.1E-7 T 12-10-2018 IPR000477 Reverse transcriptase domain Vc3S01_2040 97bef967ef8628d59d2a4c0ad97cd5a6 212 Pfam PF02698 DUF218 domain 33 148 8.1E-22 T 12-10-2018 IPR003848 Domain of unknown function DUF218 Vc3S01_2040 97bef967ef8628d59d2a4c0ad97cd5a6 212 Gene3D G3DSA:3.40.50.620 14 152 1.3E-29 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Vc3S01_2518 c16e234f175a8a12ad25d4711dae48a3 156 Pfam PF07295 Zinc-ribbon containing domain 14 152 1.5E-46 T 12-10-2018 IPR009912 Zinc-ribbon containing domain Vc3S01_A0526 6c6d84251a3b9521df98b91a1000cd64 419 Pfam PF04932 O-Antigen ligase 179 336 1.9E-12 T 12-10-2018 IPR007016 O-antigen ligase-related Vc3S01_1172 ecf6d4ae100d764010bec7b742f9bf1b 468 Pfam PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase 28 241 7.8E-17 T 12-10-2018 IPR003342 Glycosyl transferase family 39/83 GO:0000030|GO:0006493|GO:0016020 Reactome: R-HSA-5173105 Vc3S01_p30037 25425cb640d193829bdf78f0e621af66 149 Pfam PF13700 Domain of unknown function (DUF4158) 9 147 8.1E-33 T 12-10-2018 IPR025296 Domain of unknown function DUF4158 Vc3S01_A1492 8320cf6dd581f8a971b9b354e31b5f08 103 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 2 100 3.7E-24 T 12-10-2018 IPR008407 Branched-chain amino acid transport, AzlD Vc3S01_2578 69dbf39676c9379c2e7bf3069fbe8302 179 Pfam PF11810 Domain of unknown function (DUF3332) 7 175 1.1E-42 T 12-10-2018 IPR021768 Protein of unknown function DUF3332 Vc3S01_A1061 e080d874616aa86f9b4d76c717cf7bd8 80 Pfam PF09932 Uncharacterized conserved protein (DUF2164) 2 75 3.1E-28 T 12-10-2018 IPR018680 Protein of unknown function DUF2164 Vc3S01_1767 793639cdc05b6158fa4ed1151cba5cf6 187 Pfam PF03729 Short repeat of unknown function (DUF308) 78 147 1.6E-8 T 12-10-2018 IPR005325 Protein of unknown function DUF308, membrane Vc3S01_1767 793639cdc05b6158fa4ed1151cba5cf6 187 Pfam PF03729 Short repeat of unknown function (DUF308) 22 92 2.4E-12 T 12-10-2018 IPR005325 Protein of unknown function DUF308, membrane Vc3S01_A0962 33748be54c2f8a683966f611e56f227f 144 SUPERFAMILY SSF109604 12 89 1.15E-6 T 12-10-2018 Vc3S01_2067 980cc1e116377b5cf99f7e1e8adb5b1d 273 Pfam PF07103 Protein of unknown function (DUF1365) 9 246 8.0E-71 T 12-10-2018 IPR010775 Protein of unknown function DUF1365 Vc3S01_0819 dfd77110aab250c2ec9880d3f1efc45e 146 Pfam PF09842 Predicted membrane protein (DUF2069) 21 122 3.9E-34 T 12-10-2018 IPR018643 Protein of unknown function DUF2069, membrane Vc3S01_2702 df6af191b0b278f22e7948be92f8e9bf 494 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 328 437 5.6E-22 T 12-10-2018 IPR025299 CstA, C-terminal domain Vc3S01_2702 df6af191b0b278f22e7948be92f8e9bf 494 Pfam PF02554 Carbon starvation protein CstA 4 144 2.0E-33 T 12-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 Vc3S01_0863 a6a5c879f2c976946d91a2c1b2ab3832 137 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 42 109 7.4E-22 T 12-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 Vc3S01_0863 a6a5c879f2c976946d91a2c1b2ab3832 137 Pfam PF04347 Flagellar biosynthesis protein, FliO 54 131 6.0E-19 T 12-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 Vc3S01_0347 43de4c17894ca869ff1c960f563bdfbf 456 Pfam PF06122 Conjugative relaxosome accessory transposon protein 28 382 9.0E-94 T 12-10-2018 IPR010927 Type IV conjugative transfer system protein TraH Vc3S01_p40031 7cc40f8f1f964a3a3bf971ab85d6ac47 166 Pfam PF05154 TM2 domain 101 151 3.9E-15 T 12-10-2018 IPR007829 TM2 domain Vc3S01_p30085 c8285db99277720e9467346b3334b340 318 Pfam PF07751 Abi-like protein 18 197 1.5E-9 T 12-10-2018 IPR011664 Abortive infection system protein AbiD/AbiF-like Vc3S01_2586 bad87fbf22e5688e6a652e778dc95a72 519 Pfam PF03806 AbgT putative transporter family 19 517 3.7E-212 T 12-10-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 Vc3S01_A1802 7ddfe0441904da5e1fca44aa1d3b6f59 142 Pfam PF10990 Protein of unknown function (DUF2809) 50 132 3.5E-23 T 12-10-2018 IPR021257 Protein of unknown function DUF2809 Vc3S01_0241 6c3dbe536dd82ffeedae53b29d71996c 295 Pfam PF00892 EamA-like transporter family 4 135 2.6E-16 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Vc3S01_0241 6c3dbe536dd82ffeedae53b29d71996c 295 Pfam PF00892 EamA-like transporter family 156 293 5.8E-16 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Vc3S01_0241 6c3dbe536dd82ffeedae53b29d71996c 295 SUPERFAMILY SSF103481 36 140 3.53E-13 T 12-10-2018 Vc3S01_0241 6c3dbe536dd82ffeedae53b29d71996c 295 SUPERFAMILY SSF103481 209 293 4.97E-10 T 12-10-2018 Vc3S01_2843 c63900d760fb6e5ed84cc6650f9deb7b 371 Pfam PF04338 Protein of unknown function, DUF481 154 370 3.4E-40 T 12-10-2018 IPR007433 Protein of unknown function DUF481 Vc3S01_2973 0fbed03fb74f21d6cdb82d470bba131b 335 Pfam PF02397 Bacterial sugar transferase 148 330 2.0E-61 T 12-10-2018 IPR003362 Bacterial sugar transferase Vc3S01_A1436 078fe245ca13eb6025d24b2f0bdac826 104 Pfam PF01478 Type IV leader peptidase family 6 63 8.6E-6 T 12-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 Vc3S01_A0553 72e7e2930f52fbe62455ca1eba8245d0 201 Gene3D G3DSA:3.80.10.10 29 197 2.3E-6 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily Vc3S01_2542 31ed60a9db7ae78b78e22383d7411a98 401 Pfam PF07907 YibE/F-like protein 138 376 1.8E-72 T 12-10-2018 IPR012507 YibE/F-like Vc3S01_A0827 10c1fdf64cc4fad679c2675b30c617ed 108 Pfam PF01609 Transposase DDE domain 1 81 3.7E-9 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Vc3S01_A0440 2d1b820e17308092bfec43a9f51218b1 296 SUPERFAMILY SSF103481 42 143 5.89E-10 T 12-10-2018 Vc3S01_A0440 2d1b820e17308092bfec43a9f51218b1 296 SUPERFAMILY SSF103481 222 294 5.23E-7 T 12-10-2018 Vc3S01_A0440 2d1b820e17308092bfec43a9f51218b1 296 Pfam PF00892 EamA-like transporter family 4 139 3.8E-18 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Vc3S01_A0440 2d1b820e17308092bfec43a9f51218b1 296 Pfam PF00892 EamA-like transporter family 152 295 2.6E-12 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Vc3S01_3130 e1f6b636827c435405ef64352890bfd3 348 Pfam PF04245 37-kD nucleoid-associated bacterial protein 7 341 1.6E-56 T 12-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 Vc3S01_p30035 909a672eaae8f3a3dd5db875f3d1f91b 279 Pfam PF01526 Tn3 transposase DDE domain 4 258 3.1E-72 T 12-10-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 Vc3S01_0655 85fab05149cdbcf41e594e09a64a373d 201 Pfam PF10144 Bacterial virulence factor haemolysin 12 151 3.9E-38 T 12-10-2018 IPR019305 Uncharacterised protein family Smp Vc3S01_1537 7fae80d42214139f4ae9ed756653a774 502 Pfam PF11840 Protein of unknown function (DUF3360) 16 498 1.8E-268 T 12-10-2018 IPR021794 Protein of unknown function DUF3360 Vc3S01_A1939 55cb2f0b6ae9c179b25d982c6db29ce7 177 SUPERFAMILY SSF49401 31 176 7.46E-31 T 12-10-2018 IPR008966 Adhesion domain superfamily Vc3S01_A1939 55cb2f0b6ae9c179b25d982c6db29ce7 177 Gene3D G3DSA:2.60.40.1090 30 176 9.4E-30 T 12-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 Vc3S01_1026 2ba3542f0dc0c0706b35652e7384192e 119 Pfam PF05509 TraY domain 11 55 2.2E-16 T 12-10-2018 IPR008876 Relaxosome protein TraY GO:0000746|GO:0003677 Vc3S01_0717 644a0a23569d09cb9a7093777ffb0482 327 Pfam PF14057 GGGtGRT protein 7 324 5.3E-174 T 12-10-2018 IPR025964 GGGtGRT protein Vc3S01_A1638 20afdd0a26bc484a47c836235b9987fa 144 Pfam PF14352 Domain of unknown function (DUF4402) 53 143 9.2E-7 T 12-10-2018 IPR025514 Protein of unknown function DUF4402 Vc3S01_A1740 a2e450f7d974f7dfd06356b00477c714 172 Pfam PF05433 Glycine zipper 2TM domain 68 108 2.7E-9 T 12-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 Vc3S01_3081 94f83dd159789e2e35317df6f5b271cc 162 Pfam PF10675 Protein of unknown function (DUF2489) 14 145 3.7E-45 T 12-10-2018 IPR019617 Domain of unknown function DUF2489 Vc3S01_1434 1a8d715c80e802232ac3b7fea82cdb44 210 Pfam PF10816 Domain of unknown function (DUF2760) 87 209 4.7E-54 T 12-10-2018 IPR021212 Domain of unknown function DUF2760 Vc3S01_1540 7184cd36ee918d2abb85382642d9f49a 383 Pfam PF12698 ABC-2 family transporter protein 20 367 7.9E-39 T 12-10-2018 Vc3S01_1377 c1e4e8199033c0ed679d5e31dc989471 163 Pfam PF06271 RDD family 15 142 1.3E-25 T 12-10-2018 IPR010432 RDD Vc3S01_1022 21152c47428b2c37c27f222faf5534a3 776 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 165 349 3.1E-21 T 12-10-2018 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 Vc3S01_1022 21152c47428b2c37c27f222faf5534a3 776 SUPERFAMILY SSF52540 370 723 3.36E-25 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Vc3S01_A1770 f8e774248e8130702e5abd658b1f28fd 203 PIRSF PIRSF006324 1 203 3.2E-49 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Vc3S01_A1770 f8e774248e8130702e5abd658b1f28fd 203 Pfam PF01810 LysE type translocator 13 202 1.2E-35 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Vc3S01_A0856 e36639c943cb62113726de290adb1b10 294 Pfam PF13990 YjcZ-like protein 24 289 2.4E-59 T 12-10-2018 IPR025599 YjcZ-like protein Vc3S01_A0075 12e725bb0373ecec6a3c19f3930de4e7 147 Pfam PF07681 DoxX 17 103 3.3E-23 T 12-10-2018 IPR032808 DoxX family Vc3S01_2056 d4d163734d59414007440e815c063763 533 Pfam PF03553 Na+/H+ antiporter family 165 497 3.1E-106 T 12-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 Vc3S01_3075 0f1933200520251f46d73f81b3872352 193 Pfam PF13511 Domain of unknown function (DUF4124) 15 61 3.9E-12 T 12-10-2018 IPR025392 Domain of unknown function DUF4124 Vc3S01_2241 49c7381c0f8d199c4d850ddadad0ddd8 261 Pfam PF01925 Sulfite exporter TauE/SafE 12 251 1.5E-45 T 12-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 Vc3S01_A0072 2d1a2e534b7aa7b77bbfc9790fefbe5c 83 Pfam PF11280 Protein of unknown function (DUF3081) 5 81 1.0E-29 T 12-10-2018 IPR021432 Protein of unknown function DUF3081 Vc3S01_A0011 c10c29d9d938aa93d74ae29ec0794142 69 Pfam PF11686 Protein of unknown function (DUF3283) 4 64 7.6E-34 T 12-10-2018 IPR021700 Protein of unknown function DUF3283 Vc3S01_p30092 982c998880b0a552f9d6f6387a256bed 255 Gene3D G3DSA:2.60.40.2500 130 254 1.1E-34 T 12-10-2018 IPR038161 VirB9/CagX/TrbG, C-terminal domain superfamily Vc3S01_p30092 982c998880b0a552f9d6f6387a256bed 255 Pfam PF03524 Conjugal transfer protein 31 226 1.3E-53 T 12-10-2018 IPR010258 Conjugal transfer, TrbG/VirB9/CagX Vc3S01_A1655 f65763a85c105c7d2faba6f9b5df2b7b 173 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 5 173 1.5E-60 T 12-10-2018 IPR018636 Protein of unknown function DUF2058 Vc3S01_2762 ffb286a7955e9e12a3937b537ae66496 206 Pfam PF03458 UPF0126 domain 95 165 4.1E-19 T 12-10-2018 IPR005115 Uncharacterised domain UPF0126 Vc3S01_2762 ffb286a7955e9e12a3937b537ae66496 206 Pfam PF03458 UPF0126 domain 8 81 2.7E-22 T 12-10-2018 IPR005115 Uncharacterised domain UPF0126 Vc3S01_2297 d0d64b9419b3a30a5773f771c7bb9a25 90 SUPERFAMILY SSF56925 11 90 2.07E-7 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel Vc3S01_A0088 a120a2399f70cc9173a5559f55105a07 167 Pfam PF11012 Protein of unknown function (DUF2850) 59 138 1.8E-29 T 12-10-2018 IPR021271 Protein of unknown function DUF2850 Vc3S01_2490 8babdc6cbea0757b75b8a6acb51d24ee 149 Pfam PF04214 Protein of unknown function, DUF 48 118 3.0E-29 T 12-10-2018 IPR007332 Protein of unknown function DUF411 Vc3S01_2351 6c8565f1e9f10174991c61755c359ed9 174 SUPERFAMILY SSF55166 32 141 1.88E-5 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Vc3S01_A1846 fb9e6d983d98f90a0d5e441f3515e671 423 Pfam PF08874 Domain of unknown function (DUF1835) 100 215 1.0E-13 T 12-10-2018 IPR014973 Protein of unknown function DUF1835 Vc3S01_A1936 c1ce7f52aef6bb9f6df279bb8eeafcf5 329 SUPERFAMILY SSF49401 190 328 1.24E-6 T 12-10-2018 IPR008966 Adhesion domain superfamily Vc3S01_p20061 9956a37cf58259273bfccb04f845ab6e 1235 Gene3D G3DSA:3.40.50.620 30 258 1.1E-16 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Vc3S01_p20061 9956a37cf58259273bfccb04f845ab6e 1235 SUPERFAMILY SSF52402 39 252 1.67E-8 T 12-10-2018 Vc3S01_p40059 c10be50c6e6775162252aaf176c02bbd 125 Pfam PF05713 Bacterial mobilisation protein (MobC) 72 118 1.5E-6 T 12-10-2018 IPR008687 Bacterial mobilisation Vc3S01_A0456 9486ccbb0cc219157b1f4467d6f43b32 477 Pfam PF07603 Protein of unknown function (DUF1566) 291 419 2.1E-12 T 12-10-2018 IPR011460 Protein of unknown function DUF1566 Vc3S01_A1399 a4bbbee78f7dd2bfbe69f4ff7e858cab 336 Pfam PF10974 Protein of unknown function (DUF2804) 37 335 2.8E-88 T 12-10-2018 IPR021243 Protein of unknown function DUF2804 Vc3S01_1166 ff53f6bd96e0ecf321389651dff8b80c 451 Gene3D G3DSA:3.10.350.10 283 364 4.1E-5 T 12-10-2018 IPR036779 LysM domain superfamily Vc3S01_A0003 f4d11d93c4a6dadf8a8954d0ea51c481 656 Pfam PF11826 Protein of unknown function (DUF3346) 290 514 6.2E-142 T 12-10-2018 IPR021781 Protein of unknown function DUF3346 Vc3S01_A1120 b84a13a6af8a747338a88bf7f328f52b 122 Pfam PF10719 Late competence development protein ComFB 8 85 1.4E-16 T 12-10-2018 IPR019657 Late competence development protein ComFB Vc3S01_A1926 9e63dc33342c45a631ccb457bfca714c 102 Pfam PF04519 Polymer-forming cytoskeletal 2 67 5.7E-15 T 12-10-2018 IPR007607 Bactofilin A/B Vc3S01_A1624 cddead0ead91e7220714126f0504af26 494 Pfam PF08811 Protein of unknown function (DUF1800) 11 491 1.1E-67 T 12-10-2018 IPR014917 Protein of unknown function DUF1800 Vc3S01_A1119 de7357896d8aa9cc19916a6e8bcaca22 93 Pfam PF10115 Transcriptional activator HlyU 2 92 6.0E-40 T 12-10-2018 IPR018772 Transcription activator HlyU Vc3S01_A0763 63356f849ce57fc0083024a1ec0bf731 409 Pfam PF02687 FtsX-like permease family 292 397 1.0E-10 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Vc3S01_0134 3dd740ac27460a70c2a63efca2b3df06 447 Pfam PF01554 MatE 24 184 2.9E-24 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Vc3S01_0134 3dd740ac27460a70c2a63efca2b3df06 447 Pfam PF01554 MatE 251 399 2.1E-13 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Vc3S01_0134 3dd740ac27460a70c2a63efca2b3df06 447 TIGRFAM TIGR00797 matE: MATE efflux family protein 24 418 2.8E-74 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Vc3S01_1249 330f2bb28fe621f130e73c6d6d75144d 179 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 30 161 1.5E-26 T 12-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ Vc3S01_A0591 cfee2549b981d4dceeb8ace22c0844c0 177 Pfam PF11810 Domain of unknown function (DUF3332) 8 173 1.1E-37 T 12-10-2018 IPR021768 Protein of unknown function DUF3332 Vc3S01_A0627 7a99e76596e487eed9f9d62409f331d7 299 Pfam PF10124 Mu-like prophage major head subunit gpT 9 298 2.1E-105 T 12-10-2018 IPR018774 Bacteriophage Mu, GpT Vc3S01_p20201 7a99e76596e487eed9f9d62409f331d7 299 Pfam PF10124 Mu-like prophage major head subunit gpT 9 298 2.1E-105 T 12-10-2018 IPR018774 Bacteriophage Mu, GpT Vc3S01_1683 168824717f16b121b7f8484c1dbe448e 150 Pfam PF11749 Protein of unknown function (DUF3305) 54 140 1.8E-19 T 12-10-2018 IPR021736 Protein of unknown function DUF3305 Vc3S01_A0082 90950cf65ea3d8f4fcac73bb266c8a61 476 Pfam PF03600 Citrate transporter 45 420 5.0E-52 T 12-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 Vc3S01_A0082 90950cf65ea3d8f4fcac73bb266c8a61 476 TIGRFAM TIGR00775 NhaD: Na+/H+ antiporter, NhaD family 45 462 3.4E-180 T 12-10-2018 IPR004672 Na+/H+ antiporter NhaD Vc3S01_1925 3083101689f559a997a885e98de28a60 218 Gene3D G3DSA:2.60.120.620 1 215 1.2E-52 T 12-10-2018 Vc3S01_1925 3083101689f559a997a885e98de28a60 218 Pfam PF10014 2OG-Fe dioxygenase 24 208 1.9E-52 T 12-10-2018 IPR018724 2OG-Fe dioxygenase Vc3S01_A0488 fef4e8f815c82fedf8adba74c8f2bfc3 163 Pfam PF10517 Electron transfer DM13 59 154 7.9E-20 T 12-10-2018 IPR019545 DM13 domain Vc3S01_0759 d73878d16a19f8dd5603ae5a19db31c5 253 Pfam PF11101 Protein of unknown function (DUF2884) 27 251 1.1E-72 T 12-10-2018 IPR021307 Protein of unknown function DUF2884 Vc3S01_A1066 9afc6cc76c4ad73d47b63834ef3fd661 179 Pfam PF06496 Protein of unknown function (DUF1097) 29 161 6.8E-38 T 12-10-2018 IPR009476 Protein of unknown function DUF1097 Vc3S01_0112 8cee0ae7211b61770a582746dcf19d4c 337 Pfam PF01757 Acyltransferase family 7 326 4.3E-31 T 12-10-2018 IPR002656 Acyltransferase 3 GO:0016747 Vc3S01_0075 d8e5512ffc938270d3c5d7fce815a20f 101 Pfam PF12305 Protein of unknown function (DUF3630) 5 98 1.1E-38 T 12-10-2018 IPR022080 Protein of unknown function DUF3630