M892_17175 a91e1571c863c639c1f2c92ca2123d81 170 Pfam PF13740 ACT domain 5 67 2.1E-10 T 12-10-2018 M892_17175 a91e1571c863c639c1f2c92ca2123d81 170 Gene3D G3DSA:3.30.70.260 85 169 2.3E-12 T 12-10-2018 M892_17175 a91e1571c863c639c1f2c92ca2123d81 170 PIRSF PIRSF028103 1 169 1.8E-41 T 12-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 M892_17175 a91e1571c863c639c1f2c92ca2123d81 170 SUPERFAMILY SSF55021 89 167 1.96E-10 T 12-10-2018 M892_00035 9dd248811cf8189c4fef6ac1ee42d087 347 SUPERFAMILY SSF46689 16 131 2.09E-25 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_00035 9dd248811cf8189c4fef6ac1ee42d087 347 SUPERFAMILY SSF53098 221 318 1.82E-7 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_00035 9dd248811cf8189c4fef6ac1ee42d087 347 Pfam PF13358 DDE superfamily endonuclease 169 312 3.9E-32 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_00035 9dd248811cf8189c4fef6ac1ee42d087 347 Gene3D G3DSA:3.30.420.470 136 340 1.0E-11 T 12-10-2018 M892_00035 9dd248811cf8189c4fef6ac1ee42d087 347 Pfam PF13592 Winged helix-turn helix 98 155 7.3E-20 T 12-10-2018 IPR025959 Winged helix-turn helix domain M892_00035 9dd248811cf8189c4fef6ac1ee42d087 347 Pfam PF13551 Winged helix-turn helix 32 87 2.3E-8 T 12-10-2018 M892_12170 56f4b9c7f44a18477e3c547206478d82 211 SMART SM00671 72 107 0.0061 T 12-10-2018 IPR006597 Sel1-like repeat M892_12170 56f4b9c7f44a18477e3c547206478d82 211 SMART SM00671 144 179 22.0 T 12-10-2018 IPR006597 Sel1-like repeat M892_12170 56f4b9c7f44a18477e3c547206478d82 211 SMART SM00671 108 143 2.9E-6 T 12-10-2018 IPR006597 Sel1-like repeat M892_12170 56f4b9c7f44a18477e3c547206478d82 211 Pfam PF08238 Sel1 repeat 108 143 1.7E-5 T 12-10-2018 IPR006597 Sel1-like repeat M892_12170 56f4b9c7f44a18477e3c547206478d82 211 Pfam PF08238 Sel1 repeat 76 106 0.027 T 12-10-2018 IPR006597 Sel1-like repeat M892_12170 56f4b9c7f44a18477e3c547206478d82 211 Gene3D G3DSA:1.25.40.10 33 211 1.2E-25 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_12170 56f4b9c7f44a18477e3c547206478d82 211 SUPERFAMILY SSF81901 64 178 1.96E-22 T 12-10-2018 M892_14630 cb28ba479d2a079fc240af75a59e9a02 448 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 448 220.733 T 12-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 M892_14630 cb28ba479d2a079fc240af75a59e9a02 448 SUPERFAMILY SSF55729 303 428 5.75E-17 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_14630 cb28ba479d2a079fc240af75a59e9a02 448 PIRSF PIRSF000423 2 448 4.2E-204 T 12-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 M892_14630 cb28ba479d2a079fc240af75a59e9a02 448 SUPERFAMILY SSF53633 7 297 1.82E-67 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily M892_14630 cb28ba479d2a079fc240af75a59e9a02 448 Gene3D G3DSA:3.40.630.30 300 448 3.2E-36 T 12-10-2018 M892_14630 cb28ba479d2a079fc240af75a59e9a02 448 Gene3D G3DSA:3.40.1160.10 10 299 8.1E-85 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily M892_14630 cb28ba479d2a079fc240af75a59e9a02 448 Pfam PF00583 Acetyltransferase (GNAT) family 336 419 4.8E-8 T 12-10-2018 IPR000182 GNAT domain M892_14630 cb28ba479d2a079fc240af75a59e9a02 448 Pfam PF00696 Amino acid kinase family 28 273 1.6E-28 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 M892_14630 cb28ba479d2a079fc240af75a59e9a02 448 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 11 447 1.3E-202 T 12-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 M892_23545 62f29bc3f65b14fada7d66696400072d 432 Gene3D G3DSA:3.90.220.20 5 202 1.2E-29 T 12-10-2018 M892_23545 62f29bc3f65b14fada7d66696400072d 432 Gene3D G3DSA:3.90.220.20 215 428 4.9E-38 T 12-10-2018 M892_23545 62f29bc3f65b14fada7d66696400072d 432 Pfam PF01420 Type I restriction modification DNA specificity domain 231 412 1.8E-14 T 12-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 M892_23545 62f29bc3f65b14fada7d66696400072d 432 Pfam PF01420 Type I restriction modification DNA specificity domain 34 186 1.5E-7 T 12-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 M892_23545 62f29bc3f65b14fada7d66696400072d 432 SUPERFAMILY SSF116734 8 207 1.5E-34 T 12-10-2018 M892_23545 62f29bc3f65b14fada7d66696400072d 432 SUPERFAMILY SSF116734 218 431 5.56E-39 T 12-10-2018 M892_10395 832e1a8c82c0841f741cafb8ace867a8 494 SUPERFAMILY SSF48179 210 341 4.42E-39 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 M892_10395 832e1a8c82c0841f741cafb8ace867a8 494 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 35 367 3.8E-125 T 12-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 M892_10395 832e1a8c82c0841f741cafb8ace867a8 494 Gene3D G3DSA:3.40.50.720 1 208 9.3E-87 T 12-10-2018 M892_10395 832e1a8c82c0841f741cafb8ace867a8 494 Gene3D G3DSA:1.10.1040.10 209 494 1.8E-120 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 M892_10395 832e1a8c82c0841f741cafb8ace867a8 494 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 22 488 36.944 T 12-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 M892_10395 832e1a8c82c0841f741cafb8ace867a8 494 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 355 485 7.4E-17 T 12-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 M892_10395 832e1a8c82c0841f741cafb8ace867a8 494 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 210 341 3.4E-25 T 12-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 M892_10395 832e1a8c82c0841f741cafb8ace867a8 494 SUPERFAMILY SSF48179 348 487 9.18E-43 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 M892_10395 832e1a8c82c0841f741cafb8ace867a8 494 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 35 204 1.2E-59 T 12-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 M892_10395 832e1a8c82c0841f741cafb8ace867a8 494 SUPERFAMILY SSF51735 29 209 1.47E-57 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_07615 0b1d4778c121fac62a01a716a290ae43 617 Gene3D G3DSA:2.60.34.10 379 519 9.6E-49 T 12-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 M892_07615 0b1d4778c121fac62a01a716a290ae43 617 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 615 4.2E-266 T 12-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 M892_07615 0b1d4778c121fac62a01a716a290ae43 617 Gene3D G3DSA:3.30.420.40 194 361 3.8E-111 T 12-10-2018 M892_07615 0b1d4778c121fac62a01a716a290ae43 617 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 205 218 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 M892_07615 0b1d4778c121fac62a01a716a290ae43 617 SUPERFAMILY SSF100920 384 537 1.31E-50 T 12-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 M892_07615 0b1d4778c121fac62a01a716a290ae43 617 PRINTS PR00301 70kDa heat shock protein signature 48 60 9.4E-52 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 M892_07615 0b1d4778c121fac62a01a716a290ae43 617 PRINTS PR00301 70kDa heat shock protein signature 20 33 9.4E-52 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 M892_07615 0b1d4778c121fac62a01a716a290ae43 617 PRINTS PR00301 70kDa heat shock protein signature 360 380 9.4E-52 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 M892_07615 0b1d4778c121fac62a01a716a290ae43 617 PRINTS PR00301 70kDa heat shock protein signature 152 172 9.4E-52 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 M892_07615 0b1d4778c121fac62a01a716a290ae43 617 PRINTS PR00301 70kDa heat shock protein signature 466 482 9.4E-52 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 M892_07615 0b1d4778c121fac62a01a716a290ae43 617 PRINTS PR00301 70kDa heat shock protein signature 211 221 9.4E-52 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 M892_07615 0b1d4778c121fac62a01a716a290ae43 617 PRINTS PR00301 70kDa heat shock protein signature 385 404 9.4E-52 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 M892_07615 0b1d4778c121fac62a01a716a290ae43 617 PRINTS PR00301 70kDa heat shock protein signature 329 345 9.4E-52 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 M892_07615 0b1d4778c121fac62a01a716a290ae43 617 SUPERFAMILY SSF53067 200 377 2.39E-48 T 12-10-2018 M892_07615 0b1d4778c121fac62a01a716a290ae43 617 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 M892_07615 0b1d4778c121fac62a01a716a290ae43 617 SUPERFAMILY SSF100934 504 616 7.46E-34 T 12-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 M892_07615 0b1d4778c121fac62a01a716a290ae43 617 Pfam PF00012 Hsp70 protein 22 601 1.9E-189 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 M892_07615 0b1d4778c121fac62a01a716a290ae43 617 Gene3D G3DSA:3.30.420.40 23 374 3.8E-111 T 12-10-2018 M892_07615 0b1d4778c121fac62a01a716a290ae43 617 Gene3D G3DSA:3.90.640.10 238 311 3.8E-111 T 12-10-2018 M892_07615 0b1d4778c121fac62a01a716a290ae43 617 SUPERFAMILY SSF53067 19 196 3.63E-51 T 12-10-2018 M892_07615 0b1d4778c121fac62a01a716a290ae43 617 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 617 46.198 T 12-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 M892_07615 0b1d4778c121fac62a01a716a290ae43 617 Gene3D G3DSA:1.20.1270.10 520 616 1.6E-25 T 12-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 M892_19965 71eec97bcf87d3f4881f351669a1431c 239 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 132 160 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 M892_19965 71eec97bcf87d3f4881f351669a1431c 239 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 237 1.2E-60 T 12-10-2018 M892_19965 71eec97bcf87d3f4881f351669a1431c 239 SUPERFAMILY SSF51735 4 238 3.22E-79 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_19965 71eec97bcf87d3f4881f351669a1431c 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 221 4.3E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_19965 71eec97bcf87d3f4881f351669a1431c 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 4.3E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_19965 71eec97bcf87d3f4881f351669a1431c 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 4.3E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_19965 71eec97bcf87d3f4881f351669a1431c 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 4.3E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_19965 71eec97bcf87d3f4881f351669a1431c 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 4.3E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_19965 71eec97bcf87d3f4881f351669a1431c 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 4.3E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_19965 71eec97bcf87d3f4881f351669a1431c 239 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 183 5.6E-4 T 12-10-2018 M892_19965 71eec97bcf87d3f4881f351669a1431c 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 3.4E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_19965 71eec97bcf87d3f4881f351669a1431c 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 3.4E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_19965 71eec97bcf87d3f4881f351669a1431c 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 3.4E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_19965 71eec97bcf87d3f4881f351669a1431c 239 Gene3D G3DSA:3.40.50.720 1 239 8.7E-81 T 12-10-2018 M892_12005 aa4893303a047d170c5ad9ad991f16c0 510 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 5 510 49.039 T 12-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 M892_12005 aa4893303a047d170c5ad9ad991f16c0 510 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 5 508 1.6E-227 T 12-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 M892_12005 aa4893303a047d170c5ad9ad991f16c0 510 PIRSF PIRSF001492 1 510 2.0E-201 T 12-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 M892_12005 aa4893303a047d170c5ad9ad991f16c0 510 Gene3D G3DSA:3.40.720.10 6 509 9.3E-209 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 M892_12005 aa4893303a047d170c5ad9ad991f16c0 510 Pfam PF01676 Metalloenzyme superfamily 5 498 1.3E-79 T 12-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 M892_12005 aa4893303a047d170c5ad9ad991f16c0 510 SUPERFAMILY SSF53649 4 509 2.75E-75 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 M892_12005 aa4893303a047d170c5ad9ad991f16c0 510 Gene3D G3DSA:3.40.1450.10 78 310 9.3E-209 T 12-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 M892_12005 aa4893303a047d170c5ad9ad991f16c0 510 SUPERFAMILY SSF64158 78 308 1.96E-80 T 12-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 M892_12005 aa4893303a047d170c5ad9ad991f16c0 510 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 83 297 3.5E-80 T 12-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 M892_11685 2338a77654d355c2540d2d6ea7e84020 143 Gene3D G3DSA:3.30.420.470 20 137 2.7E-13 T 12-10-2018 M892_11685 2338a77654d355c2540d2d6ea7e84020 143 Pfam PF13358 DDE superfamily endonuclease 9 111 7.8E-20 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_10880 2338a77654d355c2540d2d6ea7e84020 143 Gene3D G3DSA:3.30.420.470 20 137 2.7E-13 T 12-10-2018 M892_10880 2338a77654d355c2540d2d6ea7e84020 143 Pfam PF13358 DDE superfamily endonuclease 9 111 7.8E-20 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_04165 2338a77654d355c2540d2d6ea7e84020 143 Gene3D G3DSA:3.30.420.470 20 137 2.7E-13 T 12-10-2018 M892_04165 2338a77654d355c2540d2d6ea7e84020 143 Pfam PF13358 DDE superfamily endonuclease 9 111 7.8E-20 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_12635 2338a77654d355c2540d2d6ea7e84020 143 Gene3D G3DSA:3.30.420.470 20 137 2.7E-13 T 12-10-2018 M892_12635 2338a77654d355c2540d2d6ea7e84020 143 Pfam PF13358 DDE superfamily endonuclease 9 111 7.8E-20 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_10410 2338a77654d355c2540d2d6ea7e84020 143 Gene3D G3DSA:3.30.420.470 20 137 2.7E-13 T 12-10-2018 M892_10410 2338a77654d355c2540d2d6ea7e84020 143 Pfam PF13358 DDE superfamily endonuclease 9 111 7.8E-20 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_11095 2338a77654d355c2540d2d6ea7e84020 143 Gene3D G3DSA:3.30.420.470 20 137 2.7E-13 T 12-10-2018 M892_11095 2338a77654d355c2540d2d6ea7e84020 143 Pfam PF13358 DDE superfamily endonuclease 9 111 7.8E-20 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_24665 67fd655040c7912b678f0425bfeb186d 304 Gene3D G3DSA:3.40.190.10 168 267 6.9E-45 T 12-10-2018 M892_24665 67fd655040c7912b678f0425bfeb186d 304 SUPERFAMILY SSF46785 3 84 5.23E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_24665 67fd655040c7912b678f0425bfeb186d 304 Pfam PF03466 LysR substrate binding domain 92 295 9.9E-22 T 12-10-2018 IPR005119 LysR, substrate-binding M892_24665 67fd655040c7912b678f0425bfeb186d 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 2.9E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_24665 67fd655040c7912b678f0425bfeb186d 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 2.9E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_24665 67fd655040c7912b678f0425bfeb186d 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.9E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_24665 67fd655040c7912b678f0425bfeb186d 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 1.8E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_24665 67fd655040c7912b678f0425bfeb186d 304 Gene3D G3DSA:3.40.190.10 95 290 6.9E-45 T 12-10-2018 M892_24665 67fd655040c7912b678f0425bfeb186d 304 SUPERFAMILY SSF53850 88 294 2.17E-37 T 12-10-2018 M892_24665 67fd655040c7912b678f0425bfeb186d 304 Gene3D G3DSA:1.10.10.10 1 86 3.2E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_01385 990ee53f90a9e352999f2d4f5945f626 1048 Gene3D G3DSA:1.10.3210.10 881 1025 1.7E-22 T 12-10-2018 M892_01385 990ee53f90a9e352999f2d4f5945f626 1048 Gene3D G3DSA:1.10.3210.10 652 767 3.1E-19 T 12-10-2018 M892_01385 990ee53f90a9e352999f2d4f5945f626 1048 Gene3D G3DSA:3.40.190.10 374 468 4.7E-36 T 12-10-2018 M892_01385 990ee53f90a9e352999f2d4f5945f626 1048 SUPERFAMILY SSF109604 669 752 1.51E-7 T 12-10-2018 M892_01385 990ee53f90a9e352999f2d4f5945f626 1048 SUPERFAMILY SSF53850 293 506 5.79E-24 T 12-10-2018 M892_01385 990ee53f90a9e352999f2d4f5945f626 1048 Gene3D G3DSA:3.40.190.10 289 505 4.7E-36 T 12-10-2018 M892_01385 990ee53f90a9e352999f2d4f5945f626 1048 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 298 506 1.2E-15 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M892_01385 990ee53f90a9e352999f2d4f5945f626 1048 SMART SM00471 674 985 0.0012 T 12-10-2018 IPR003607 HD/PDEase domain M892_01385 990ee53f90a9e352999f2d4f5945f626 1048 SMART SM00062 292 509 0.0012 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M892_01385 990ee53f90a9e352999f2d4f5945f626 1048 Pfam PF13487 HD domain 902 967 7.4E-19 T 12-10-2018 M892_01385 990ee53f90a9e352999f2d4f5945f626 1048 SUPERFAMILY SSF109604 903 1000 8.17E-7 T 12-10-2018 M892_19610 ec6cc2c72046dcedc07dff6894847256 1052 Gene3D G3DSA:1.20.1640.10 502 1013 7.3E-251 T 12-10-2018 M892_19610 ec6cc2c72046dcedc07dff6894847256 1052 Gene3D G3DSA:3.30.2090.10 180 270 7.3E-251 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M892_19610 ec6cc2c72046dcedc07dff6894847256 1052 Gene3D G3DSA:3.30.70.1430 46 803 7.3E-251 T 12-10-2018 M892_19610 ec6cc2c72046dcedc07dff6894847256 1052 Gene3D G3DSA:3.30.70.1440 660 856 7.3E-251 T 12-10-2018 M892_19610 ec6cc2c72046dcedc07dff6894847256 1052 Gene3D G3DSA:3.30.70.1430 559 659 7.3E-251 T 12-10-2018 M892_19610 ec6cc2c72046dcedc07dff6894847256 1052 Gene3D G3DSA:3.30.70.1320 139 327 7.3E-251 T 12-10-2018 M892_19610 ec6cc2c72046dcedc07dff6894847256 1052 SUPERFAMILY SSF82693 149 325 3.66E-10 T 12-10-2018 M892_19610 ec6cc2c72046dcedc07dff6894847256 1052 SUPERFAMILY SSF82693 46 138 3.92E-18 T 12-10-2018 M892_19610 ec6cc2c72046dcedc07dff6894847256 1052 SUPERFAMILY SSF82866 292 488 9.16E-36 T 12-10-2018 M892_19610 ec6cc2c72046dcedc07dff6894847256 1052 Gene3D G3DSA:3.30.2090.10 708 795 7.3E-251 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M892_19610 ec6cc2c72046dcedc07dff6894847256 1052 SUPERFAMILY SSF82714 719 793 4.84E-7 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M892_19610 ec6cc2c72046dcedc07dff6894847256 1052 SUPERFAMILY SSF82866 791 1019 1.7E-49 T 12-10-2018 M892_19610 ec6cc2c72046dcedc07dff6894847256 1052 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 9.4E-21 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_19610 ec6cc2c72046dcedc07dff6894847256 1052 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 9.4E-21 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_19610 ec6cc2c72046dcedc07dff6894847256 1052 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 9.4E-21 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_19610 ec6cc2c72046dcedc07dff6894847256 1052 PRINTS PR00702 Acriflavin resistance protein family signature 16 40 9.4E-21 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_19610 ec6cc2c72046dcedc07dff6894847256 1052 PRINTS PR00702 Acriflavin resistance protein family signature 44 62 9.4E-21 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_19610 ec6cc2c72046dcedc07dff6894847256 1052 SUPERFAMILY SSF82714 185 266 5.62E-14 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M892_19610 ec6cc2c72046dcedc07dff6894847256 1052 Gene3D G3DSA:1.20.1640.10 16 501 7.3E-251 T 12-10-2018 M892_19610 ec6cc2c72046dcedc07dff6894847256 1052 Pfam PF00873 AcrB/AcrD/AcrF family 9 1016 2.5E-154 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_01670 b343e97b31a61cb619c33fb494b91a24 868 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 443 544 1.2E-32 T 12-10-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold M892_01670 b343e97b31a61cb619c33fb494b91a24 868 SUPERFAMILY SSF63737 2 192 3.79E-46 T 12-10-2018 M892_01670 b343e97b31a61cb619c33fb494b91a24 868 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 547 866 1.1E-113 T 12-10-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal M892_01670 b343e97b31a61cb619c33fb494b91a24 868 Gene3D G3DSA:1.10.390.10 279 442 8.2E-65 T 12-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily M892_01670 b343e97b31a61cb619c33fb494b91a24 868 Pfam PF01433 Peptidase family M1 domain 207 435 1.9E-57 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 M892_01670 b343e97b31a61cb619c33fb494b91a24 868 Gene3D G3DSA:2.60.40.1840 443 544 5.4E-35 T 12-10-2018 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily M892_01670 b343e97b31a61cb619c33fb494b91a24 868 Gene3D G3DSA:1.25.50.10 545 867 7.9E-115 T 12-10-2018 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily M892_01670 b343e97b31a61cb619c33fb494b91a24 868 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 12 866 0.0 T 12-10-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 M892_01670 b343e97b31a61cb619c33fb494b91a24 868 Gene3D G3DSA:2.60.40.1730 15 193 9.9E-71 T 12-10-2018 M892_01670 b343e97b31a61cb619c33fb494b91a24 868 Gene3D G3DSA:1.10.1740.60 194 278 1.0E-39 T 12-10-2018 M892_01670 b343e97b31a61cb619c33fb494b91a24 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 312 324 4.3E-9 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 M892_01670 b343e97b31a61cb619c33fb494b91a24 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 175 190 4.3E-9 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 M892_01670 b343e97b31a61cb619c33fb494b91a24 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 293 308 4.3E-9 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 M892_01670 b343e97b31a61cb619c33fb494b91a24 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 257 267 4.3E-9 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 M892_01670 b343e97b31a61cb619c33fb494b91a24 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 125 140 4.3E-9 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 M892_01670 b343e97b31a61cb619c33fb494b91a24 868 SUPERFAMILY SSF55486 203 449 1.32E-74 T 12-10-2018 M892_27845 455e3c0df3f0bfd6ae790bceb6237858 411 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 5 410 23.862 T 12-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 M892_27845 455e3c0df3f0bfd6ae790bceb6237858 411 Pfam PF03616 Sodium/glutamate symporter 6 379 9.8E-151 T 12-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 M892_27845 455e3c0df3f0bfd6ae790bceb6237858 411 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 10 410 3.0E-134 T 12-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 M892_15410 9e444dfc2a5884234606fddcb3a981fd 660 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 1.3E-63 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 M892_15410 9e444dfc2a5884234606fddcb3a981fd 660 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 632 645 1.3E-63 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 M892_15410 9e444dfc2a5884234606fddcb3a981fd 660 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 1.3E-63 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 M892_15410 9e444dfc2a5884234606fddcb3a981fd 660 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 1.3E-63 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 M892_15410 9e444dfc2a5884234606fddcb3a981fd 660 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 1.3E-63 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 M892_15410 9e444dfc2a5884234606fddcb3a981fd 660 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 1.3E-63 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 M892_15410 9e444dfc2a5884234606fddcb3a981fd 660 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 1.3E-63 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 M892_15410 9e444dfc2a5884234606fddcb3a981fd 660 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 642 8.0E-256 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 M892_15410 9e444dfc2a5884234606fddcb3a981fd 660 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 639 2.6E-126 T 12-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal M892_15410 9e444dfc2a5884234606fddcb3a981fd 660 Pfam PF01578 Cytochrome C assembly protein 89 297 2.5E-54 T 12-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 M892_15410 9e444dfc2a5884234606fddcb3a981fd 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 2.2E-95 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 M892_15410 9e444dfc2a5884234606fddcb3a981fd 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 2.2E-95 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 M892_15410 9e444dfc2a5884234606fddcb3a981fd 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 2.2E-95 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 M892_15410 9e444dfc2a5884234606fddcb3a981fd 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 2.2E-95 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 M892_15410 9e444dfc2a5884234606fddcb3a981fd 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 2.2E-95 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 M892_15410 9e444dfc2a5884234606fddcb3a981fd 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 2.2E-95 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 M892_15410 9e444dfc2a5884234606fddcb3a981fd 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 2.2E-95 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 M892_15410 9e444dfc2a5884234606fddcb3a981fd 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 2.2E-95 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 M892_04300 dcef8de96e687b11111b7a24f7102749 340 SUPERFAMILY SSF52374 12 337 3.38E-75 T 12-10-2018 M892_04300 dcef8de96e687b11111b7a24f7102749 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 204 214 2.4E-21 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 M892_04300 dcef8de96e687b11111b7a24f7102749 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 74 93 2.4E-21 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 M892_04300 dcef8de96e687b11111b7a24f7102749 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 152 173 2.4E-21 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 M892_04300 dcef8de96e687b11111b7a24f7102749 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 23 39 2.4E-21 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 M892_04300 dcef8de96e687b11111b7a24f7102749 340 Gene3D G3DSA:1.10.240.10 191 305 1.7E-99 T 12-10-2018 M892_04300 dcef8de96e687b11111b7a24f7102749 340 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 10 337 8.3E-69 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 M892_04300 dcef8de96e687b11111b7a24f7102749 340 Gene3D G3DSA:3.40.50.620 13 332 1.7E-99 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M892_04300 dcef8de96e687b11111b7a24f7102749 340 Pfam PF00579 tRNA synthetases class I (W and Y) 8 292 2.2E-53 T 12-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 M892_08995 2b4acbf5ff4df0a2fa90d38ccd1f3181 232 Pfam PF10986 Protein of unknown function (DUF2796) 141 227 1.8E-19 T 12-10-2018 IPR021253 Protein of unknown function DUF2796 M892_08995 2b4acbf5ff4df0a2fa90d38ccd1f3181 232 Pfam PF10986 Protein of unknown function (DUF2796) 28 148 3.2E-31 T 12-10-2018 IPR021253 Protein of unknown function DUF2796 M892_24720 5a77a7edb3d910a562acc01634d27756 333 Pfam PF12833 Helix-turn-helix domain 257 330 3.9E-10 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M892_24720 5a77a7edb3d910a562acc01634d27756 333 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 29 195 4.6E-17 T 12-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal M892_24720 5a77a7edb3d910a562acc01634d27756 333 SUPERFAMILY SSF46689 287 330 1.7E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_24720 5a77a7edb3d910a562acc01634d27756 333 Gene3D G3DSA:1.10.10.60 235 333 4.3E-14 T 12-10-2018 M892_24720 5a77a7edb3d910a562acc01634d27756 333 SMART SM00342 247 328 4.8E-9 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M892_24720 5a77a7edb3d910a562acc01634d27756 333 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 312 328 5.9E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 M892_24720 5a77a7edb3d910a562acc01634d27756 333 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 297 312 5.9E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 M892_14250 1d11dc21d2c8870f98af47da4b3d248a 695 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 689 8.6E-291 T 12-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 M892_14250 1d11dc21d2c8870f98af47da4b3d248a 695 Pfam PF03144 Elongation factor Tu domain 2 321 388 6.3E-16 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 M892_14250 1d11dc21d2c8870f98af47da4b3d248a 695 Pfam PF00009 Elongation factor Tu GTP binding domain 6 277 1.9E-60 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M892_14250 1d11dc21d2c8870f98af47da4b3d248a 695 SUPERFAMILY SSF52540 3 277 1.48E-99 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_14250 1d11dc21d2c8870f98af47da4b3d248a 695 SUPERFAMILY SSF54211 476 595 1.26E-38 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold M892_14250 1d11dc21d2c8870f98af47da4b3d248a 695 SUPERFAMILY SSF54980 600 690 8.63E-28 T 12-10-2018 IPR035647 EF-G domain III/V-like M892_14250 1d11dc21d2c8870f98af47da4b3d248a 695 SUPERFAMILY SSF54980 401 478 6.83E-21 T 12-10-2018 IPR035647 EF-G domain III/V-like M892_14250 1d11dc21d2c8870f98af47da4b3d248a 695 PRINTS PR00315 GTP-binding elongation factor signature 9 22 1.2E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M892_14250 1d11dc21d2c8870f98af47da4b3d248a 695 PRINTS PR00315 GTP-binding elongation factor signature 75 85 1.2E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M892_14250 1d11dc21d2c8870f98af47da4b3d248a 695 PRINTS PR00315 GTP-binding elongation factor signature 55 63 1.2E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M892_14250 1d11dc21d2c8870f98af47da4b3d248a 695 PRINTS PR00315 GTP-binding elongation factor signature 127 136 1.2E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M892_14250 1d11dc21d2c8870f98af47da4b3d248a 695 SMART SM00889 477 595 3.1E-60 T 12-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 M892_14250 1d11dc21d2c8870f98af47da4b3d248a 695 Gene3D G3DSA:3.30.70.870 403 480 5.1E-26 T 12-10-2018 M892_14250 1d11dc21d2c8870f98af47da4b3d248a 695 Gene3D G3DSA:3.30.230.10 481 684 7.9E-81 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M892_14250 1d11dc21d2c8870f98af47da4b3d248a 695 Pfam PF00679 Elongation factor G C-terminus 597 683 1.0E-27 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like M892_14250 1d11dc21d2c8870f98af47da4b3d248a 695 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 176 1.3E-24 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 M892_14250 1d11dc21d2c8870f98af47da4b3d248a 695 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site M892_14250 1d11dc21d2c8870f98af47da4b3d248a 695 SMART SM00838 597 684 3.3E-44 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like M892_14250 1d11dc21d2c8870f98af47da4b3d248a 695 SUPERFAMILY SSF50447 261 399 1.77E-31 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily M892_14250 1d11dc21d2c8870f98af47da4b3d248a 695 Pfam PF03764 Elongation factor G, domain IV 476 594 2.2E-42 T 12-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 M892_14250 1d11dc21d2c8870f98af47da4b3d248a 695 Gene3D G3DSA:2.40.30.10 290 402 1.6E-36 T 12-10-2018 M892_14250 1d11dc21d2c8870f98af47da4b3d248a 695 Hamap MF_00054_B Elongation factor G [fusA]. 3 688 101.207 T 12-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 M892_14250 1d11dc21d2c8870f98af47da4b3d248a 695 Gene3D G3DSA:3.40.50.300 1 289 2.3E-102 T 12-10-2018 M892_14250 1d11dc21d2c8870f98af47da4b3d248a 695 Gene3D G3DSA:3.30.70.240 601 671 7.9E-81 T 12-10-2018 M892_14250 1d11dc21d2c8870f98af47da4b3d248a 695 Pfam PF14492 Elongation Factor G, domain II 401 474 3.3E-29 T 12-10-2018 M892_10320 aa111b87362d12654545956c2c3303ae 519 Gene3D G3DSA:3.40.190.10 34 280 3.7E-124 T 12-10-2018 M892_10320 aa111b87362d12654545956c2c3303ae 519 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 69 426 3.1E-86 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain M892_10320 aa111b87362d12654545956c2c3303ae 519 Gene3D G3DSA:3.90.76.10 59 167 3.7E-124 T 12-10-2018 M892_10320 aa111b87362d12654545956c2c3303ae 519 Gene3D G3DSA:3.10.105.10 281 496 3.7E-124 T 12-10-2018 M892_10320 aa111b87362d12654545956c2c3303ae 519 PIRSF PIRSF002741 23 514 6.7E-96 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 M892_10320 aa111b87362d12654545956c2c3303ae 519 SUPERFAMILY SSF53850 28 518 6.36E-130 T 12-10-2018 M892_13420 22355529c179b1214c65bbdafcb42bd3 299 Pfam PF10502 Signal peptidase, peptidase S26 211 269 5.7E-8 T 12-10-2018 IPR019533 Peptidase S26 M892_13420 22355529c179b1214c65bbdafcb42bd3 299 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 66 272 2.3E-47 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 M892_13420 22355529c179b1214c65bbdafcb42bd3 299 Gene3D G3DSA:2.10.109.10 78 272 5.6E-75 T 12-10-2018 M892_13420 22355529c179b1214c65bbdafcb42bd3 299 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 144 156 6.0E-27 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 M892_13420 22355529c179b1214c65bbdafcb42bd3 299 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 80 96 6.0E-27 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 M892_13420 22355529c179b1214c65bbdafcb42bd3 299 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 232 251 6.0E-27 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 M892_13420 22355529c179b1214c65bbdafcb42bd3 299 Pfam PF00717 Peptidase S24-like 86 162 1.1E-21 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C M892_13420 22355529c179b1214c65bbdafcb42bd3 299 ProSitePatterns PS00761 Signal peptidases I signature 3. 237 250 - T 12-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 M892_13420 22355529c179b1214c65bbdafcb42bd3 299 ProSitePatterns PS00760 Signal peptidases I lysine active site. 146 158 - T 12-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 M892_13420 22355529c179b1214c65bbdafcb42bd3 299 SUPERFAMILY SSF51306 78 298 4.71E-71 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily M892_13420 22355529c179b1214c65bbdafcb42bd3 299 ProSitePatterns PS00501 Signal peptidases I serine active site. 89 96 - T 12-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 M892_13420 22355529c179b1214c65bbdafcb42bd3 299 Gene3D G3DSA:2.170.230.10 155 231 5.6E-75 T 12-10-2018 M892_01610 8e3e296f86386ee7c726a9047cab2045 350 Pfam PF00793 DAHP synthetase I family 44 338 1.5E-98 T 12-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 M892_01610 8e3e296f86386ee7c726a9047cab2045 350 PIRSF PIRSF001361 1 350 1.0E-153 T 12-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 M892_01610 8e3e296f86386ee7c726a9047cab2045 350 Gene3D G3DSA:3.20.20.70 1 350 7.1E-151 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M892_01610 8e3e296f86386ee7c726a9047cab2045 350 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 348 2.4E-158 T 12-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 M892_01610 8e3e296f86386ee7c726a9047cab2045 350 SUPERFAMILY SSF51569 8 347 1.4E-129 T 12-10-2018 M892_20210 929f71a5a712d4274b5f0d74ffc1d11e 385 Gene3D G3DSA:3.40.50.300 4 222 1.8E-64 T 12-10-2018 M892_20210 929f71a5a712d4274b5f0d74ffc1d11e 385 Pfam PF08402 TOBE domain 273 345 5.4E-12 T 12-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 M892_20210 929f71a5a712d4274b5f0d74ffc1d11e 385 Pfam PF00005 ABC transporter 21 162 3.8E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_20210 929f71a5a712d4274b5f0d74ffc1d11e 385 SUPERFAMILY SSF50331 237 353 1.31E-26 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal M892_20210 929f71a5a712d4274b5f0d74ffc1d11e 385 SMART SM00382 29 212 6.4E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_20210 929f71a5a712d4274b5f0d74ffc1d11e 385 Gene3D G3DSA:2.40.50.140 280 337 2.0E-30 T 12-10-2018 M892_20210 929f71a5a712d4274b5f0d74ffc1d11e 385 Gene3D G3DSA:2.40.50.940 223 346 2.0E-30 T 12-10-2018 M892_20210 929f71a5a712d4274b5f0d74ffc1d11e 385 SUPERFAMILY SSF52540 4 243 4.5E-86 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_20210 929f71a5a712d4274b5f0d74ffc1d11e 385 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_12280 e172ae652de4babb56f5c06f6c8a89e5 179 Gene3D G3DSA:3.10.50.40 3 154 1.8E-58 T 12-10-2018 M892_12280 e172ae652de4babb56f5c06f6c8a89e5 179 Gene3D G3DSA:2.40.10.330 71 121 1.8E-58 T 12-10-2018 M892_12280 e172ae652de4babb56f5c06f6c8a89e5 179 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 136 6.5E-12 T 12-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain M892_12280 e172ae652de4babb56f5c06f6c8a89e5 179 SUPERFAMILY SSF54534 2 139 8.05E-35 T 12-10-2018 M892_21810 5ece988c10ee9608dccb8c5a4e202373 254 Gene3D G3DSA:3.40.50.300 1 253 2.0E-68 T 12-10-2018 M892_21810 5ece988c10ee9608dccb8c5a4e202373 254 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_21810 5ece988c10ee9608dccb8c5a4e202373 254 SMART SM00382 26 213 9.6E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_21810 5ece988c10ee9608dccb8c5a4e202373 254 SUPERFAMILY SSF52540 2 227 5.97E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_21810 5ece988c10ee9608dccb8c5a4e202373 254 Pfam PF00005 ABC transporter 18 165 7.9E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_03895 b82e17cc353beaabd181fb5e89ec03ab 820 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 716 743 - T 12-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 M892_03895 b82e17cc353beaabd181fb5e89ec03ab 820 Gene3D G3DSA:3.40.50.740 87 569 8.6E-241 T 12-10-2018 M892_03895 b82e17cc353beaabd181fb5e89ec03ab 820 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 503 520 - T 12-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 M892_03895 b82e17cc353beaabd181fb5e89ec03ab 820 Pfam PF00384 Molybdopterin oxidoreductase 87 560 1.5E-76 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M892_03895 b82e17cc353beaabd181fb5e89ec03ab 820 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 28 2.1E-4 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal M892_03895 b82e17cc353beaabd181fb5e89ec03ab 820 Pfam PF01568 Molydopterin dinucleotide binding domain 676 796 7.1E-24 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 M892_03895 b82e17cc353beaabd181fb5e89ec03ab 820 Gene3D G3DSA:3.90.55.10 82 615 8.6E-241 T 12-10-2018 M892_03895 b82e17cc353beaabd181fb5e89ec03ab 820 Gene3D G3DSA:2.40.40.20 649 813 1.3E-47 T 12-10-2018 M892_03895 b82e17cc353beaabd181fb5e89ec03ab 820 TIGRFAM TIGR02164 torA: trimethylamine-N-oxide reductase TorA 1 819 0.0 T 12-10-2018 IPR011887 Trimethylamine-N-oxide reductase TorA GO:0030151|GO:0042597|GO:0050626 M892_03895 b82e17cc353beaabd181fb5e89ec03ab 820 Gene3D G3DSA:3.40.228.10 179 641 8.6E-241 T 12-10-2018 M892_03895 b82e17cc353beaabd181fb5e89ec03ab 820 SUPERFAMILY SSF53706 42 660 5.23E-165 T 12-10-2018 M892_03895 b82e17cc353beaabd181fb5e89ec03ab 820 SUPERFAMILY SSF50692 669 817 2.71E-42 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily M892_09805 12f4130efe926ffed7dce766339af30d 131 TIGRFAM TIGR01707 gspI: type II secretion system protein I 20 117 4.6E-37 T 12-10-2018 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 M892_09805 12f4130efe926ffed7dce766339af30d 131 Pfam PF02501 Type II secretion system (T2SS), protein I 54 129 3.0E-22 T 12-10-2018 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 M892_09805 12f4130efe926ffed7dce766339af30d 131 Gene3D G3DSA:3.30.1300.30 44 131 5.2E-36 T 12-10-2018 M892_09805 12f4130efe926ffed7dce766339af30d 131 Pfam PF07963 Prokaryotic N-terminal methylation motif 16 40 3.9E-7 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M892_09805 12f4130efe926ffed7dce766339af30d 131 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 19 38 4.9E-6 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M892_09805 12f4130efe926ffed7dce766339af30d 131 SUPERFAMILY SSF54523 51 129 7.46E-23 T 12-10-2018 M892_09805 12f4130efe926ffed7dce766339af30d 131 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 19 39 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M892_12690 2e03ea81fcad00896ab78aa0ed0410b3 676 Gene3D G3DSA:3.20.20.450 397 640 1.2E-36 T 12-10-2018 IPR035919 EAL domain superfamily M892_12690 2e03ea81fcad00896ab78aa0ed0410b3 676 SUPERFAMILY SSF141868 408 638 7.72E-36 T 12-10-2018 IPR035919 EAL domain superfamily M892_12690 2e03ea81fcad00896ab78aa0ed0410b3 676 SUPERFAMILY SSF55073 233 386 9.42E-19 T 12-10-2018 IPR029787 Nucleotide cyclase M892_12690 2e03ea81fcad00896ab78aa0ed0410b3 676 Pfam PF00990 Diguanylate cyclase, GGDEF domain 229 381 1.3E-20 T 12-10-2018 IPR000160 GGDEF domain M892_12690 2e03ea81fcad00896ab78aa0ed0410b3 676 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 226 382 2.0E-10 T 12-10-2018 IPR000160 GGDEF domain M892_12690 2e03ea81fcad00896ab78aa0ed0410b3 676 SMART SM00267 216 386 1.2E-7 T 12-10-2018 IPR000160 GGDEF domain M892_12690 2e03ea81fcad00896ab78aa0ed0410b3 676 Gene3D G3DSA:3.30.70.270 211 387 1.5E-22 T 12-10-2018 M892_12690 2e03ea81fcad00896ab78aa0ed0410b3 676 Pfam PF00563 EAL domain 406 638 4.4E-49 T 12-10-2018 IPR001633 EAL domain M892_12690 2e03ea81fcad00896ab78aa0ed0410b3 676 SMART SM00052 397 641 2.3E-11 T 12-10-2018 IPR001633 EAL domain M892_12690 2e03ea81fcad00896ab78aa0ed0410b3 676 Pfam PF17157 Gammaproteobacterial periplasmic sensor domain 39 134 9.4E-27 T 12-10-2018 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 M892_14955 b7f01bd286586b3b8dbcba1b6c7c7f35 379 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 3 376 5.0E-145 T 12-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 M892_14955 b7f01bd286586b3b8dbcba1b6c7c7f35 379 SUPERFAMILY SSF53756 6 378 2.08E-29 T 12-10-2018 M892_14955 b7f01bd286586b3b8dbcba1b6c7c7f35 379 Gene3D G3DSA:3.40.50.2000 174 357 4.5E-5 T 12-10-2018 M892_14955 b7f01bd286586b3b8dbcba1b6c7c7f35 379 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 4 378 42.104 T 12-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 M892_14955 b7f01bd286586b3b8dbcba1b6c7c7f35 379 Pfam PF02684 Lipid-A-disaccharide synthetase 7 372 3.1E-131 T 12-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 M892_01975 4c0127b918cb5ba30b3dd941ac089ed4 951 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 62 112 1.7E-11 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M892_01975 4c0127b918cb5ba30b3dd941ac089ed4 951 Pfam PF01568 Molydopterin dinucleotide binding domain 818 944 1.7E-20 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 M892_01975 4c0127b918cb5ba30b3dd941ac089ed4 951 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 66 83 - T 12-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 M892_01975 4c0127b918cb5ba30b3dd941ac089ed4 951 Gene3D G3DSA:3.40.50.740 126 617 9.2E-132 T 12-10-2018 M892_01975 4c0127b918cb5ba30b3dd941ac089ed4 951 SUPERFAMILY SSF50692 752 951 2.07E-38 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily M892_01975 4c0127b918cb5ba30b3dd941ac089ed4 951 Gene3D G3DSA:2.40.40.20 767 951 6.1E-48 T 12-10-2018 M892_01975 4c0127b918cb5ba30b3dd941ac089ed4 951 Pfam PF00384 Molybdopterin oxidoreductase 118 568 1.6E-54 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M892_01975 4c0127b918cb5ba30b3dd941ac089ed4 951 SUPERFAMILY SSF53706 60 646 2.22E-199 T 12-10-2018 M892_01975 4c0127b918cb5ba30b3dd941ac089ed4 951 PIRSF PIRSF036643 11 581 2.4E-112 T 12-10-2018 M892_01975 4c0127b918cb5ba30b3dd941ac089ed4 951 PIRSF PIRSF036643 641 677 390.0 T 12-10-2018 M892_01975 4c0127b918cb5ba30b3dd941ac089ed4 951 PIRSF PIRSF036643 779 950 5.5E-16 T 12-10-2018 M892_01975 4c0127b918cb5ba30b3dd941ac089ed4 951 SMART SM00926 61 115 3.9E-16 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M892_01975 4c0127b918cb5ba30b3dd941ac089ed4 951 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 19 43 5.5E-4 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal M892_01975 4c0127b918cb5ba30b3dd941ac089ed4 951 Gene3D G3DSA:3.40.228.10 195 394 9.2E-132 T 12-10-2018 M892_01975 4c0127b918cb5ba30b3dd941ac089ed4 951 Gene3D G3DSA:2.20.25.90 62 114 3.1E-12 T 12-10-2018 M892_09185 abc0a95d3b1f5f1fd7223b93a4e566e9 136 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 58 69 - T 12-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_09185 abc0a95d3b1f5f1fd7223b93a4e566e9 136 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 133 37.508 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_09185 abc0a95d3b1f5f1fd7223b93a4e566e9 136 Gene3D G3DSA:3.90.1170.10 1 136 4.7E-54 T 12-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 M892_09185 abc0a95d3b1f5f1fd7223b93a4e566e9 136 PRINTS PR00060 Ribosomal protein L16 signature 23 35 3.4E-40 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_09185 abc0a95d3b1f5f1fd7223b93a4e566e9 136 PRINTS PR00060 Ribosomal protein L16 signature 87 116 3.4E-40 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_09185 abc0a95d3b1f5f1fd7223b93a4e566e9 136 PRINTS PR00060 Ribosomal protein L16 signature 41 52 3.4E-40 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_09185 abc0a95d3b1f5f1fd7223b93a4e566e9 136 PRINTS PR00060 Ribosomal protein L16 signature 57 86 3.4E-40 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_09185 abc0a95d3b1f5f1fd7223b93a4e566e9 136 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 125 4.7E-57 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_09185 abc0a95d3b1f5f1fd7223b93a4e566e9 136 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 8.8E-47 T 12-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 M892_09185 abc0a95d3b1f5f1fd7223b93a4e566e9 136 SUPERFAMILY SSF54686 3 133 4.19E-53 T 12-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 M892_20495 4b0d254e95da1ac5fd9ba88de9c6d291 385 SUPERFAMILY SSF53098 8 372 9.1E-55 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_20495 4b0d254e95da1ac5fd9ba88de9c6d291 385 Pfam PF01609 Transposase DDE domain 130 293 1.2E-15 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_24835 4b0d254e95da1ac5fd9ba88de9c6d291 385 SUPERFAMILY SSF53098 8 372 9.1E-55 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_24835 4b0d254e95da1ac5fd9ba88de9c6d291 385 Pfam PF01609 Transposase DDE domain 130 293 1.2E-15 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_27395 4b0d254e95da1ac5fd9ba88de9c6d291 385 SUPERFAMILY SSF53098 8 372 9.1E-55 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_27395 4b0d254e95da1ac5fd9ba88de9c6d291 385 Pfam PF01609 Transposase DDE domain 130 293 1.2E-15 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_07020 e69f0d40af4d98dc79b07febf93242d9 363 Gene3D G3DSA:3.30.70.2810 1 79 1.1E-32 T 12-10-2018 M892_07020 e69f0d40af4d98dc79b07febf93242d9 363 PIRSF PIRSF028774 1 362 6.8E-193 T 12-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 M892_07020 e69f0d40af4d98dc79b07febf93242d9 363 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 1 357 83.454 T 12-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 M892_07020 e69f0d40af4d98dc79b07febf93242d9 363 Gene3D G3DSA:3.30.2300.20 80 177 1.9E-39 T 12-10-2018 M892_07020 e69f0d40af4d98dc79b07febf93242d9 363 Pfam PF01728 FtsJ-like methyltransferase 188 281 2.9E-5 T 12-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 M892_07020 e69f0d40af4d98dc79b07febf93242d9 363 Gene3D G3DSA:3.40.50.150 178 358 1.8E-52 T 12-10-2018 M892_07020 e69f0d40af4d98dc79b07febf93242d9 363 SUPERFAMILY SSF53335 186 299 1.43E-12 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M892_12925 498024daa4afe1030a49f02ef6ec9013 106 Pfam PF13466 STAS domain 15 93 1.6E-20 T 12-10-2018 IPR002645 STAS domain M892_12925 498024daa4afe1030a49f02ef6ec9013 106 SUPERFAMILY SSF52091 13 97 1.86E-15 T 12-10-2018 IPR036513 STAS domain superfamily M892_12925 498024daa4afe1030a49f02ef6ec9013 106 Gene3D G3DSA:3.30.750.24 5 102 2.6E-14 T 12-10-2018 IPR036513 STAS domain superfamily M892_00395 b3c7d9e5798b42cf1bddda07e7ea2429 367 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 194 213 - T 12-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site M892_00395 b3c7d9e5798b42cf1bddda07e7ea2429 367 Pfam PF00266 Aminotransferase class-V 11 355 3.1E-61 T 12-10-2018 IPR000192 Aminotransferase class V domain M892_00395 b3c7d9e5798b42cf1bddda07e7ea2429 367 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 11 366 7.2E-161 T 12-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 M892_00395 b3c7d9e5798b42cf1bddda07e7ea2429 367 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 9 366 52.108 T 12-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 M892_00395 b3c7d9e5798b42cf1bddda07e7ea2429 367 PIRSF PIRSF000525 5 367 3.1E-153 T 12-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 M892_00395 b3c7d9e5798b42cf1bddda07e7ea2429 367 Gene3D G3DSA:3.40.640.10 24 264 1.4E-92 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M892_00395 b3c7d9e5798b42cf1bddda07e7ea2429 367 Gene3D G3DSA:3.90.1150.10 265 367 6.7E-40 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M892_00395 b3c7d9e5798b42cf1bddda07e7ea2429 367 SUPERFAMILY SSF53383 11 365 7.86E-115 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M892_20765 7a6206824a705a895dbc422cd45a25a7 390 SUPERFAMILY SSF103473 2 380 1.26E-39 T 12-10-2018 IPR036259 MFS transporter superfamily M892_20765 7a6206824a705a895dbc422cd45a25a7 390 Gene3D G3DSA:1.20.1250.20 1 381 4.7E-37 T 12-10-2018 M892_20765 7a6206824a705a895dbc422cd45a25a7 390 Pfam PF07690 Major Facilitator Superfamily 9 244 4.4E-15 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 M892_20765 7a6206824a705a895dbc422cd45a25a7 390 Pfam PF07690 Major Facilitator Superfamily 251 381 3.3E-13 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 M892_12790 a8a5f675e5eb7e6b992ef9f81a1e44fe 189 Hamap MF_00528 Septum formation protein Maf [maf]. 6 189 29.461 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 M892_12790 a8a5f675e5eb7e6b992ef9f81a1e44fe 189 Pfam PF02545 Maf-like protein 7 187 1.3E-59 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 M892_12790 a8a5f675e5eb7e6b992ef9f81a1e44fe 189 TIGRFAM TIGR00172 maf: septum formation protein Maf 6 184 2.2E-55 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 M892_12790 a8a5f675e5eb7e6b992ef9f81a1e44fe 189 SUPERFAMILY SSF52972 6 187 5.04E-62 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like M892_12790 a8a5f675e5eb7e6b992ef9f81a1e44fe 189 PIRSF PIRSF006305 2 189 1.3E-57 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 M892_12790 a8a5f675e5eb7e6b992ef9f81a1e44fe 189 Gene3D G3DSA:3.90.950.10 5 189 3.3E-70 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like M892_27045 5670d380b44bd40721563f46ffc0a272 258 Gene3D G3DSA:3.40.1190.20 1 258 2.8E-53 T 12-10-2018 IPR029056 Ribokinase-like M892_27045 5670d380b44bd40721563f46ffc0a272 258 SUPERFAMILY SSF53613 1 249 6.72E-47 T 12-10-2018 IPR029056 Ribokinase-like M892_27045 5670d380b44bd40721563f46ffc0a272 258 Pfam PF00294 pfkB family carbohydrate kinase 1 248 4.7E-39 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB M892_04035 22288d0e7b401432bc0709a4ed723ca0 135 SMART SM00528 88 135 8.6E-26 T 12-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 M892_04035 22288d0e7b401432bc0709a4ed723ca0 135 SUPERFAMILY SSF81273 2 58 9.22E-17 T 12-10-2018 M892_04035 22288d0e7b401432bc0709a4ed723ca0 135 Pfam PF00816 H-NS histone family 33 129 9.3E-20 T 12-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 M892_04035 22288d0e7b401432bc0709a4ed723ca0 135 Gene3D G3DSA:1.10.287.1050 1 92 5.2E-29 T 12-10-2018 IPR027454 Histone-like protein H-NS, N-terminal GO:0046983 M892_04035 22288d0e7b401432bc0709a4ed723ca0 135 SUPERFAMILY SSF81273 93 135 2.08E-12 T 12-10-2018 M892_04035 22288d0e7b401432bc0709a4ed723ca0 135 PIRSF PIRSF002096 1 135 2.2E-55 T 12-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 M892_04035 22288d0e7b401432bc0709a4ed723ca0 135 Gene3D G3DSA:4.10.430.10 93 135 4.2E-26 T 12-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 M892_08375 2827c0c35767aba19d03d840e9856d8d 485 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 22 479 43.868 T 12-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 M892_08375 2827c0c35767aba19d03d840e9856d8d 485 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 25 473 1.0E-187 T 12-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 M892_08375 2827c0c35767aba19d03d840e9856d8d 485 Pfam PF08245 Mur ligase middle domain 127 307 6.4E-29 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 M892_08375 2827c0c35767aba19d03d840e9856d8d 485 Gene3D G3DSA:3.90.190.20 326 482 2.2E-49 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 M892_08375 2827c0c35767aba19d03d840e9856d8d 485 Pfam PF02875 Mur ligase family, glutamate ligase domain 329 417 3.5E-21 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 M892_08375 2827c0c35767aba19d03d840e9856d8d 485 Gene3D G3DSA:3.40.1190.10 111 325 5.4E-85 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 M892_08375 2827c0c35767aba19d03d840e9856d8d 485 Pfam PF01225 Mur ligase family, catalytic domain 25 121 1.3E-28 T 12-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 M892_08375 2827c0c35767aba19d03d840e9856d8d 485 SUPERFAMILY SSF51984 23 109 1.57E-29 T 12-10-2018 M892_08375 2827c0c35767aba19d03d840e9856d8d 485 SUPERFAMILY SSF53244 326 474 2.75E-48 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 M892_08375 2827c0c35767aba19d03d840e9856d8d 485 Gene3D G3DSA:3.40.50.720 23 110 5.2E-34 T 12-10-2018 M892_08375 2827c0c35767aba19d03d840e9856d8d 485 SUPERFAMILY SSF53623 108 322 2.09E-72 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 M892_21005 13a2419f92869b0c05b136a013f1f5d3 302 SUPERFAMILY SSF53850 92 282 1.76E-16 T 12-10-2018 M892_21005 13a2419f92869b0c05b136a013f1f5d3 302 SUPERFAMILY SSF46785 5 87 2.26E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_21005 13a2419f92869b0c05b136a013f1f5d3 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 3.0E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_21005 13a2419f92869b0c05b136a013f1f5d3 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 3.0E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_21005 13a2419f92869b0c05b136a013f1f5d3 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 3.0E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_21005 13a2419f92869b0c05b136a013f1f5d3 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 2.2E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_21005 13a2419f92869b0c05b136a013f1f5d3 302 Pfam PF03466 LysR substrate binding domain 96 250 3.1E-10 T 12-10-2018 IPR005119 LysR, substrate-binding M892_21005 13a2419f92869b0c05b136a013f1f5d3 302 Gene3D G3DSA:3.40.190.290 95 281 2.5E-10 T 12-10-2018 M892_21005 13a2419f92869b0c05b136a013f1f5d3 302 Gene3D G3DSA:1.10.10.10 1 91 2.8E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_15535 a4e9a945f3b215854ea95980820bab39 337 SMART SM00859 6 121 4.2E-41 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 M892_15535 a4e9a945f3b215854ea95980820bab39 337 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 4 333 36.336 T 12-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 M892_15535 a4e9a945f3b215854ea95980820bab39 337 Gene3D G3DSA:3.40.50.720 7 330 3.6E-151 T 12-10-2018 M892_15535 a4e9a945f3b215854ea95980820bab39 337 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 120 6.3E-32 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 M892_15535 a4e9a945f3b215854ea95980820bab39 337 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 6 334 2.5E-129 T 12-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 M892_15535 a4e9a945f3b215854ea95980820bab39 337 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 232 246 - T 12-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 M892_15535 a4e9a945f3b215854ea95980820bab39 337 Gene3D G3DSA:3.30.360.10 130 316 3.6E-151 T 12-10-2018 M892_15535 a4e9a945f3b215854ea95980820bab39 337 SUPERFAMILY SSF55347 131 320 4.46E-77 T 12-10-2018 M892_15535 a4e9a945f3b215854ea95980820bab39 337 PIRSF PIRSF000148 4 337 7.5E-133 T 12-10-2018 M892_15535 a4e9a945f3b215854ea95980820bab39 337 SUPERFAMILY SSF51735 5 159 2.15E-51 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_15535 a4e9a945f3b215854ea95980820bab39 337 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 319 1.5E-60 T 12-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 M892_13455 e19fb479f17efd7288d793ae997c9f22 932 Gene3D G3DSA:1.10.287.130 276 356 6.6E-27 T 12-10-2018 M892_13455 e19fb479f17efd7288d793ae997c9f22 932 SUPERFAMILY SSF52172 533 643 4.54E-8 T 12-10-2018 IPR011006 CheY-like superfamily M892_13455 e19fb479f17efd7288d793ae997c9f22 932 Pfam PF00512 His Kinase A (phospho-acceptor) domain 291 355 3.5E-20 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M892_13455 e19fb479f17efd7288d793ae997c9f22 932 Gene3D G3DSA:1.20.120.160 818 932 1.5E-30 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 M892_13455 e19fb479f17efd7288d793ae997c9f22 932 SUPERFAMILY SSF47226 764 919 1.83E-22 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 M892_13455 e19fb479f17efd7288d793ae997c9f22 932 Pfam PF00072 Response regulator receiver domain 670 780 1.5E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_13455 e19fb479f17efd7288d793ae997c9f22 932 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 31 175 9.7E-53 T 12-10-2018 IPR019247 Histidine kinase BarA, N-terminal M892_13455 e19fb479f17efd7288d793ae997c9f22 932 SMART SM00448 668 781 2.1E-36 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_13455 e19fb479f17efd7288d793ae997c9f22 932 SMART SM00073 829 927 2.1E-8 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 M892_13455 e19fb479f17efd7288d793ae997c9f22 932 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 402 516 1.1E-29 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_13455 e19fb479f17efd7288d793ae997c9f22 932 SMART SM00387 402 518 1.9E-37 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_13455 e19fb479f17efd7288d793ae997c9f22 932 SMART SM00388 290 355 2.9E-24 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M892_13455 e19fb479f17efd7288d793ae997c9f22 932 SUPERFAMILY SSF47384 275 356 9.61E-23 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M892_13455 e19fb479f17efd7288d793ae997c9f22 932 SUPERFAMILY SSF52172 667 784 3.7E-36 T 12-10-2018 IPR011006 CheY-like superfamily M892_13455 e19fb479f17efd7288d793ae997c9f22 932 SMART SM00304 198 250 3.1E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M892_13455 e19fb479f17efd7288d793ae997c9f22 932 SUPERFAMILY SSF158472 200 247 1.06E-6 T 12-10-2018 M892_13455 e19fb479f17efd7288d793ae997c9f22 932 SUPERFAMILY SSF55874 344 516 1.83E-43 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_13455 e19fb479f17efd7288d793ae997c9f22 932 Pfam PF01627 Hpt domain 840 919 6.0E-12 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 M892_13455 e19fb479f17efd7288d793ae997c9f22 932 Gene3D G3DSA:3.40.50.2300 669 796 3.0E-39 T 12-10-2018 M892_13455 e19fb479f17efd7288d793ae997c9f22 932 PRINTS PR00344 Bacterial sensor protein C-terminal signature 461 471 4.2E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_13455 e19fb479f17efd7288d793ae997c9f22 932 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 457 4.2E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_13455 e19fb479f17efd7288d793ae997c9f22 932 PRINTS PR00344 Bacterial sensor protein C-terminal signature 478 496 4.2E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_13455 e19fb479f17efd7288d793ae997c9f22 932 PRINTS PR00344 Bacterial sensor protein C-terminal signature 502 515 4.2E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_13455 e19fb479f17efd7288d793ae997c9f22 932 Gene3D G3DSA:1.20.1480.50 161 270 1.4E-7 T 12-10-2018 M892_13455 e19fb479f17efd7288d793ae997c9f22 932 Gene3D G3DSA:3.30.565.10 357 521 9.9E-51 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_05270 2edfeb5135ef19a92a4d62832f5f292e 426 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 424 1.0E-141 T 12-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 M892_05270 2edfeb5135ef19a92a4d62832f5f292e 426 ProSitePatterns PS00885 EPSP synthase signature 2. 339 357 - T 12-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 M892_05270 2edfeb5135ef19a92a4d62832f5f292e 426 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 426 34.521 T 12-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 M892_05270 2edfeb5135ef19a92a4d62832f5f292e 426 PIRSF PIRSF000505 1 426 1.2E-156 T 12-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 M892_05270 2edfeb5135ef19a92a4d62832f5f292e 426 Gene3D G3DSA:3.65.10.10 242 419 1.1E-159 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 M892_05270 2edfeb5135ef19a92a4d62832f5f292e 426 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 421 1.1E-155 T 12-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 M892_05270 2edfeb5135ef19a92a4d62832f5f292e 426 SUPERFAMILY SSF55205 1 424 5.1E-145 T 12-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 M892_05270 2edfeb5135ef19a92a4d62832f5f292e 426 ProSitePatterns PS00104 EPSP synthase signature 1. 90 104 - T 12-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 M892_05270 2edfeb5135ef19a92a4d62832f5f292e 426 Gene3D G3DSA:3.65.10.10 20 224 1.1E-159 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 M892_25265 772a14ed4dbc75a12d41e4961501d007 466 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 21 466 8.2E-169 T 12-10-2018 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 M892_25265 772a14ed4dbc75a12d41e4961501d007 466 Pfam PF02397 Bacterial sugar transferase 276 458 1.5E-66 T 12-10-2018 IPR003362 Bacterial sugar transferase M892_25265 772a14ed4dbc75a12d41e4961501d007 466 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 20 466 1.6E-151 T 12-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase M892_25265 772a14ed4dbc75a12d41e4961501d007 466 Pfam PF13727 CoA-binding domain 66 240 3.5E-35 T 12-10-2018 M892_25265 772a14ed4dbc75a12d41e4961501d007 466 Gene3D G3DSA:3.40.50.720 141 264 2.1E-9 T 12-10-2018 M892_12820 98ca94b19e58f76898a284b789f98c6b 969 SUPERFAMILY SSF52540 123 378 9.87E-37 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_12820 98ca94b19e58f76898a284b789f98c6b 969 SMART SM00490 519 603 2.7E-17 T 12-10-2018 IPR001650 Helicase, C-terminal M892_12820 98ca94b19e58f76898a284b789f98c6b 969 Pfam PF00271 Helicase conserved C-terminal domain 494 603 1.8E-15 T 12-10-2018 IPR001650 Helicase, C-terminal M892_12820 98ca94b19e58f76898a284b789f98c6b 969 Pfam PF00176 SNF2 family N-terminal domain 174 344 5.7E-15 T 12-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 M892_12820 98ca94b19e58f76898a284b789f98c6b 969 Pfam PF12137 RNA polymerase recycling family C-terminal 607 966 6.3E-148 T 12-10-2018 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 M892_12820 98ca94b19e58f76898a284b789f98c6b 969 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 1 967 29.183 T 12-10-2018 IPR023949 RNA polymerase-associated protein RapA GO:0006355 M892_12820 98ca94b19e58f76898a284b789f98c6b 969 Gene3D G3DSA:2.30.30.930 55 114 5.7E-26 T 12-10-2018 M892_12820 98ca94b19e58f76898a284b789f98c6b 969 SUPERFAMILY SSF52540 273 650 4.58E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_12820 98ca94b19e58f76898a284b789f98c6b 969 Gene3D G3DSA:3.40.50.300 483 624 1.1E-25 T 12-10-2018 M892_12820 98ca94b19e58f76898a284b789f98c6b 969 Gene3D G3DSA:3.30.360.80 714 786 3.2E-30 T 12-10-2018 M892_12820 98ca94b19e58f76898a284b789f98c6b 969 Gene3D G3DSA:3.40.50.10810 625 713 3.9E-6 T 12-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily M892_12820 98ca94b19e58f76898a284b789f98c6b 969 Gene3D G3DSA:3.40.50.10810 150 437 9.8E-105 T 12-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily M892_12820 98ca94b19e58f76898a284b789f98c6b 969 Gene3D G3DSA:2.30.30.140 1 53 4.9E-24 T 12-10-2018 M892_12820 98ca94b19e58f76898a284b789f98c6b 969 SMART SM00487 150 342 1.3E-14 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain M892_02970 ed86ebed2bbb4aa8ab829d0e8d9098ed 1011 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 667 678 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M892_02970 ed86ebed2bbb4aa8ab829d0e8d9098ed 1011 Gene3D G3DSA:3.30.70.2740 414 495 3.4E-5 T 12-10-2018 M892_02970 ed86ebed2bbb4aa8ab829d0e8d9098ed 1011 SUPERFAMILY SSF46548 571 685 7.67E-7 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 M892_02970 ed86ebed2bbb4aa8ab829d0e8d9098ed 1011 Gene3D G3DSA:3.30.465.40 17 209 3.7E-48 T 12-10-2018 M892_02970 ed86ebed2bbb4aa8ab829d0e8d9098ed 1011 Pfam PF13183 4Fe-4S dicluster domain 570 681 5.0E-12 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M892_02970 ed86ebed2bbb4aa8ab829d0e8d9098ed 1011 SUPERFAMILY SSF55103 252 538 2.45E-53 T 12-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 M892_02970 ed86ebed2bbb4aa8ab829d0e8d9098ed 1011 SUPERFAMILY SSF56176 18 277 7.01E-51 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 M892_02970 ed86ebed2bbb4aa8ab829d0e8d9098ed 1011 Pfam PF02913 FAD linked oxidases, C-terminal domain 276 534 7.3E-63 T 12-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 M892_02970 ed86ebed2bbb4aa8ab829d0e8d9098ed 1011 Pfam PF01565 FAD binding domain 52 191 8.5E-37 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 M892_25360 637d4673e031b624d83ce74057645e1c 258 PIRSF PIRSF029195 1 258 7.8E-166 T 12-10-2018 IPR016910 Uncharacterised conserved protein UCP029195, PTS-EIIA 2 M892_25360 637d4673e031b624d83ce74057645e1c 258 SUPERFAMILY SSF55804 127 249 4.97E-18 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 M892_25360 637d4673e031b624d83ce74057645e1c 258 Gene3D G3DSA:3.40.930.10 106 251 2.4E-17 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 M892_25360 637d4673e031b624d83ce74057645e1c 258 SUPERFAMILY SSF55594 11 88 2.09E-12 T 12-10-2018 IPR035895 HPr-like superfamily M892_25360 637d4673e031b624d83ce74057645e1c 258 Gene3D G3DSA:3.30.1340.10 9 89 1.9E-7 T 12-10-2018 IPR035895 HPr-like superfamily M892_25360 637d4673e031b624d83ce74057645e1c 258 Pfam PF00381 PTS HPr component phosphorylation site 17 84 1.7E-4 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like M892_25360 637d4673e031b624d83ce74057645e1c 258 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 128 251 5.1E-21 T 12-10-2018 IPR002178 PTS EIIA type-2 domain M892_05710 180ac663fc7b12d1fecd9cce8692550a 149 Gene3D G3DSA:3.40.630.30 4 147 2.1E-19 T 12-10-2018 M892_05710 180ac663fc7b12d1fecd9cce8692550a 149 Pfam PF13673 Acetyltransferase (GNAT) domain 45 148 6.9E-26 T 12-10-2018 IPR000182 GNAT domain M892_05710 180ac663fc7b12d1fecd9cce8692550a 149 SUPERFAMILY SSF55729 1 146 9.19E-22 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_11025 efe88a5548da438f6a285552d8663d84 437 Pfam PF00271 Helicase conserved C-terminal domain 243 351 7.2E-30 T 12-10-2018 IPR001650 Helicase, C-terminal M892_11025 efe88a5548da438f6a285552d8663d84 437 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 389 50.555 T 12-10-2018 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 M892_11025 efe88a5548da438f6a285552d8663d84 437 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 163 171 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site M892_11025 efe88a5548da438f6a285552d8663d84 437 SMART SM00490 270 351 5.8E-32 T 12-10-2018 IPR001650 Helicase, C-terminal M892_11025 efe88a5548da438f6a285552d8663d84 437 Gene3D G3DSA:3.40.50.300 229 394 2.7E-45 T 12-10-2018 M892_11025 efe88a5548da438f6a285552d8663d84 437 Pfam PF00270 DEAD/DEAH box helicase 33 207 2.0E-45 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 M892_11025 efe88a5548da438f6a285552d8663d84 437 SUPERFAMILY SSF52540 85 363 5.88E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_11025 efe88a5548da438f6a285552d8663d84 437 SMART SM00487 28 234 2.5E-54 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain M892_11025 efe88a5548da438f6a285552d8663d84 437 Gene3D G3DSA:3.40.50.300 2 222 8.7E-72 T 12-10-2018 M892_12270 8468bc38442c789d9786088be91741c1 598 Hamap MF_01412 Glutathione-regulated potassium-efflux system protein KefB [kefB]. 3 598 47.748 T 12-10-2018 IPR020884 Glutathione-regulated potassium-efflux system protein KefB GO:0005886|GO:0006813|GO:0015503 M892_12270 8468bc38442c789d9786088be91741c1 598 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 16 283 5.4E-81 T 12-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 M892_12270 8468bc38442c789d9786088be91741c1 598 PRINTS PR00335 TrkA potassium uptake protein signature 401 415 5.2E-7 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 M892_12270 8468bc38442c789d9786088be91741c1 598 PRINTS PR00335 TrkA potassium uptake protein signature 418 432 5.2E-7 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 M892_12270 8468bc38442c789d9786088be91741c1 598 PRINTS PR00335 TrkA potassium uptake protein signature 458 468 5.2E-7 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 M892_12270 8468bc38442c789d9786088be91741c1 598 PRINTS PR00335 TrkA potassium uptake protein signature 447 457 5.2E-7 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 M892_12270 8468bc38442c789d9786088be91741c1 598 Gene3D G3DSA:1.20.1530.20 4 384 2.5E-81 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily M892_12270 8468bc38442c789d9786088be91741c1 598 Pfam PF02254 TrkA-N domain 402 512 5.0E-23 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 M892_12270 8468bc38442c789d9786088be91741c1 598 Gene3D G3DSA:3.40.50.720 399 559 3.0E-36 T 12-10-2018 M892_12270 8468bc38442c789d9786088be91741c1 598 Pfam PF00999 Sodium/hydrogen exchanger family 13 372 2.4E-68 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 M892_12270 8468bc38442c789d9786088be91741c1 598 SUPERFAMILY SSF51735 401 529 1.44E-30 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_20230 107afaaea5b81ac62bd8962deaa206db 250 SUPERFAMILY SSF51695 2 234 1.34E-70 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 M892_20230 107afaaea5b81ac62bd8962deaa206db 250 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 6 232 1.4E-38 T 12-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 M892_20230 107afaaea5b81ac62bd8962deaa206db 250 Gene3D G3DSA:3.20.20.190 1 240 1.4E-76 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 M892_14010 d088f6ed138ac2c7394fff01fb0d21e8 371 Gene3D G3DSA:2.40.420.20 289 355 6.0E-50 T 12-10-2018 M892_14010 d088f6ed138ac2c7394fff01fb0d21e8 371 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 67 277 2.9E-22 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain M892_14010 d088f6ed138ac2c7394fff01fb0d21e8 371 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 63 356 3.8E-48 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 M892_14010 d088f6ed138ac2c7394fff01fb0d21e8 371 SUPERFAMILY SSF111369 69 283 7.06E-32 T 12-10-2018 M892_14010 d088f6ed138ac2c7394fff01fb0d21e8 371 Gene3D G3DSA:2.40.30.170 68 288 6.0E-50 T 12-10-2018 M892_14010 d088f6ed138ac2c7394fff01fb0d21e8 371 Gene3D G3DSA:2.40.50.100 80 208 6.0E-50 T 12-10-2018 M892_14010 d088f6ed138ac2c7394fff01fb0d21e8 371 Gene3D G3DSA:1.10.287.470 115 174 6.0E-50 T 12-10-2018 M892_19370 d02a0bd57caa9b82ceaae03018ffcbaf 288 SUPERFAMILY SSF53850 90 284 1.21E-19 T 12-10-2018 M892_19370 d02a0bd57caa9b82ceaae03018ffcbaf 288 Pfam PF03466 LysR substrate binding domain 87 281 2.9E-15 T 12-10-2018 IPR005119 LysR, substrate-binding M892_19370 d02a0bd57caa9b82ceaae03018ffcbaf 288 Gene3D G3DSA:3.40.190.10 158 251 1.0E-39 T 12-10-2018 M892_19370 d02a0bd57caa9b82ceaae03018ffcbaf 288 Gene3D G3DSA:1.10.10.10 1 92 6.9E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_19370 d02a0bd57caa9b82ceaae03018ffcbaf 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.2E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_19370 d02a0bd57caa9b82ceaae03018ffcbaf 288 SUPERFAMILY SSF46785 3 81 2.14E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_19370 d02a0bd57caa9b82ceaae03018ffcbaf 288 Gene3D G3DSA:3.40.190.10 98 277 1.0E-39 T 12-10-2018 M892_19370 d02a0bd57caa9b82ceaae03018ffcbaf 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 5.1E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_19370 d02a0bd57caa9b82ceaae03018ffcbaf 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 5.1E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_19370 d02a0bd57caa9b82ceaae03018ffcbaf 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 5.1E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_21105 20ff2a31f4a6b915a579fd7230e6a7df 486 Hamap MF_00804 NAD/NADP-dependent betaine aldehyde dehydrogenase [betB]. 1 486 57.391 T 12-10-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 M892_21105 20ff2a31f4a6b915a579fd7230e6a7df 486 Gene3D G3DSA:3.40.605.10 18 474 4.8E-178 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 M892_21105 20ff2a31f4a6b915a579fd7230e6a7df 486 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 246 253 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 M892_21105 20ff2a31f4a6b915a579fd7230e6a7df 486 Gene3D G3DSA:3.40.309.10 253 446 4.8E-178 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 M892_21105 20ff2a31f4a6b915a579fd7230e6a7df 486 SUPERFAMILY SSF53720 5 480 3.93E-169 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 M892_21105 20ff2a31f4a6b915a579fd7230e6a7df 486 Pfam PF00171 Aldehyde dehydrogenase family 18 474 1.0E-174 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 M892_25150 1e974629e35d17ee1a60e0f3549f0553 173 SUPERFAMILY SSF52374 1 171 5.0E-26 T 12-10-2018 M892_25150 1e974629e35d17ee1a60e0f3549f0553 173 Gene3D G3DSA:3.40.50.620 1 173 1.1E-44 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M892_25150 1e974629e35d17ee1a60e0f3549f0553 173 Pfam PF01467 Cytidylyltransferase-like 7 144 8.5E-7 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 M892_27560 6c9d1384a4aa45d23812da524f450f22 640 Gene3D G3DSA:3.20.20.450 404 639 5.0E-40 T 12-10-2018 IPR035919 EAL domain superfamily M892_27560 6c9d1384a4aa45d23812da524f450f22 640 Pfam PF00990 Diguanylate cyclase, GGDEF domain 240 389 1.8E-13 T 12-10-2018 IPR000160 GGDEF domain M892_27560 6c9d1384a4aa45d23812da524f450f22 640 SMART SM00052 406 638 2.6E-10 T 12-10-2018 IPR001633 EAL domain M892_27560 6c9d1384a4aa45d23812da524f450f22 640 Gene3D G3DSA:3.30.70.270 226 395 2.6E-21 T 12-10-2018 M892_27560 6c9d1384a4aa45d23812da524f450f22 640 Pfam PF00563 EAL domain 414 638 1.2E-39 T 12-10-2018 IPR001633 EAL domain M892_27560 6c9d1384a4aa45d23812da524f450f22 640 Gene3D G3DSA:3.30.1040.50 105 154 6.8E-18 T 12-10-2018 M892_27560 6c9d1384a4aa45d23812da524f450f22 640 SMART SM00267 229 395 1.4E-13 T 12-10-2018 IPR000160 GGDEF domain M892_27560 6c9d1384a4aa45d23812da524f450f22 640 SUPERFAMILY SSF141868 414 639 7.98E-41 T 12-10-2018 IPR035919 EAL domain superfamily M892_27560 6c9d1384a4aa45d23812da524f450f22 640 SUPERFAMILY SSF55073 246 394 6.12E-18 T 12-10-2018 IPR029787 Nucleotide cyclase M892_27560 6c9d1384a4aa45d23812da524f450f22 640 Pfam PF16448 LapD/MoxY periplasmic domain 26 149 5.6E-40 T 12-10-2018 IPR032244 LapD/MoxY, periplasmic domain M892_04765 ffbca3ed4e172fe3dab551a36e4a8ba3 103 Pfam PF01527 Transposase 4 78 1.8E-16 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 M892_04765 ffbca3ed4e172fe3dab551a36e4a8ba3 103 Gene3D G3DSA:1.10.10.60 10 94 5.9E-8 T 12-10-2018 M892_04765 ffbca3ed4e172fe3dab551a36e4a8ba3 103 SUPERFAMILY SSF46689 5 96 2.15E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_20985 76cd23785c83703f8fda7d51f0b153d9 385 SUPERFAMILY SSF53098 8 372 2.81E-54 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_20985 76cd23785c83703f8fda7d51f0b153d9 385 Pfam PF01609 Transposase DDE domain 130 292 1.5E-15 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_19910 76cd23785c83703f8fda7d51f0b153d9 385 SUPERFAMILY SSF53098 8 372 2.81E-54 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_19910 76cd23785c83703f8fda7d51f0b153d9 385 Pfam PF01609 Transposase DDE domain 130 292 1.5E-15 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_23975 76cd23785c83703f8fda7d51f0b153d9 385 SUPERFAMILY SSF53098 8 372 2.81E-54 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_23975 76cd23785c83703f8fda7d51f0b153d9 385 Pfam PF01609 Transposase DDE domain 130 292 1.5E-15 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_04910 76cd23785c83703f8fda7d51f0b153d9 385 SUPERFAMILY SSF53098 8 372 2.81E-54 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_04910 76cd23785c83703f8fda7d51f0b153d9 385 Pfam PF01609 Transposase DDE domain 130 292 1.5E-15 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_23060 76cd23785c83703f8fda7d51f0b153d9 385 SUPERFAMILY SSF53098 8 372 2.81E-54 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_23060 76cd23785c83703f8fda7d51f0b153d9 385 Pfam PF01609 Transposase DDE domain 130 292 1.5E-15 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_20645 76cd23785c83703f8fda7d51f0b153d9 385 SUPERFAMILY SSF53098 8 372 2.81E-54 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_20645 76cd23785c83703f8fda7d51f0b153d9 385 Pfam PF01609 Transposase DDE domain 130 292 1.5E-15 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_14455 76cd23785c83703f8fda7d51f0b153d9 385 SUPERFAMILY SSF53098 8 372 2.81E-54 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_14455 76cd23785c83703f8fda7d51f0b153d9 385 Pfam PF01609 Transposase DDE domain 130 292 1.5E-15 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_16730 76cd23785c83703f8fda7d51f0b153d9 385 SUPERFAMILY SSF53098 8 372 2.81E-54 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_16730 76cd23785c83703f8fda7d51f0b153d9 385 Pfam PF01609 Transposase DDE domain 130 292 1.5E-15 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_03955 76cd23785c83703f8fda7d51f0b153d9 385 SUPERFAMILY SSF53098 8 372 2.81E-54 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_03955 76cd23785c83703f8fda7d51f0b153d9 385 Pfam PF01609 Transposase DDE domain 130 292 1.5E-15 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_01675 76cd23785c83703f8fda7d51f0b153d9 385 SUPERFAMILY SSF53098 8 372 2.81E-54 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_01675 76cd23785c83703f8fda7d51f0b153d9 385 Pfam PF01609 Transposase DDE domain 130 292 1.5E-15 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_03190 76cd23785c83703f8fda7d51f0b153d9 385 SUPERFAMILY SSF53098 8 372 2.81E-54 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_03190 76cd23785c83703f8fda7d51f0b153d9 385 Pfam PF01609 Transposase DDE domain 130 292 1.5E-15 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_19390 76cd23785c83703f8fda7d51f0b153d9 385 SUPERFAMILY SSF53098 8 372 2.81E-54 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_19390 76cd23785c83703f8fda7d51f0b153d9 385 Pfam PF01609 Transposase DDE domain 130 292 1.5E-15 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_06845 76cd23785c83703f8fda7d51f0b153d9 385 SUPERFAMILY SSF53098 8 372 2.81E-54 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_06845 76cd23785c83703f8fda7d51f0b153d9 385 Pfam PF01609 Transposase DDE domain 130 292 1.5E-15 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_05690 76cd23785c83703f8fda7d51f0b153d9 385 SUPERFAMILY SSF53098 8 372 2.81E-54 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_05690 76cd23785c83703f8fda7d51f0b153d9 385 Pfam PF01609 Transposase DDE domain 130 292 1.5E-15 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_21630 76cd23785c83703f8fda7d51f0b153d9 385 SUPERFAMILY SSF53098 8 372 2.81E-54 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_21630 76cd23785c83703f8fda7d51f0b153d9 385 Pfam PF01609 Transposase DDE domain 130 292 1.5E-15 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_02425 76cd23785c83703f8fda7d51f0b153d9 385 SUPERFAMILY SSF53098 8 372 2.81E-54 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_02425 76cd23785c83703f8fda7d51f0b153d9 385 Pfam PF01609 Transposase DDE domain 130 292 1.5E-15 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_08100 be75e2ddeac4f7911c7b1603b2dfd4c7 444 SUPERFAMILY SSF52540 146 380 1.94E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_08100 be75e2ddeac4f7911c7b1603b2dfd4c7 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 402 419 2.7E-5 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M892_08100 be75e2ddeac4f7911c7b1603b2dfd4c7 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 419 439 2.7E-5 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M892_08100 be75e2ddeac4f7911c7b1603b2dfd4c7 444 SUPERFAMILY SSF46689 352 438 6.45E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_08100 be75e2ddeac4f7911c7b1603b2dfd4c7 444 Gene3D G3DSA:1.10.10.60 387 440 1.0E-12 T 12-10-2018 M892_08100 be75e2ddeac4f7911c7b1603b2dfd4c7 444 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 170 183 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 M892_08100 be75e2ddeac4f7911c7b1603b2dfd4c7 444 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 352 361 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site M892_08100 be75e2ddeac4f7911c7b1603b2dfd4c7 444 SUPERFAMILY SSF52172 27 190 9.45E-8 T 12-10-2018 IPR011006 CheY-like superfamily M892_08100 be75e2ddeac4f7911c7b1603b2dfd4c7 444 Gene3D G3DSA:3.40.50.300 145 309 1.2E-39 T 12-10-2018 M892_08100 be75e2ddeac4f7911c7b1603b2dfd4c7 444 Pfam PF00158 Sigma-54 interaction domain 146 305 6.2E-37 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 M892_08100 be75e2ddeac4f7911c7b1603b2dfd4c7 444 SMART SM00382 166 306 4.4E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_08100 be75e2ddeac4f7911c7b1603b2dfd4c7 444 Pfam PF02954 Bacterial regulatory protein, Fis family 396 435 3.7E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M892_08100 be75e2ddeac4f7911c7b1603b2dfd4c7 444 Gene3D G3DSA:1.10.8.60 310 386 2.0E-22 T 12-10-2018 M892_10170 608779c753c54f030b08994cd9420384 1049 SUPERFAMILY SSF53271 53 184 1.79E-5 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like M892_10170 608779c753c54f030b08994cd9420384 1049 SUPERFAMILY SSF55785 349 472 6.63E-6 T 12-10-2018 IPR035965 PAS domain superfamily M892_10170 608779c753c54f030b08994cd9420384 1049 Gene3D G3DSA:3.20.20.450 769 1031 1.2E-74 T 12-10-2018 IPR035919 EAL domain superfamily M892_10170 608779c753c54f030b08994cd9420384 1049 Gene3D G3DSA:3.30.450.20 347 486 3.8E-8 T 12-10-2018 M892_10170 608779c753c54f030b08994cd9420384 1049 Gene3D G3DSA:3.30.450.20 487 598 3.2E-18 T 12-10-2018 M892_10170 608779c753c54f030b08994cd9420384 1049 SUPERFAMILY SSF55073 613 769 1.41E-40 T 12-10-2018 IPR029787 Nucleotide cyclase M892_10170 608779c753c54f030b08994cd9420384 1049 Pfam PF00990 Diguanylate cyclase, GGDEF domain 608 765 2.4E-35 T 12-10-2018 IPR000160 GGDEF domain M892_10170 608779c753c54f030b08994cd9420384 1049 SMART SM00091 486 552 0.0012 T 12-10-2018 IPR000014 PAS domain M892_10170 608779c753c54f030b08994cd9420384 1049 SMART SM00086 432 474 45.0 T 12-10-2018 IPR001610 PAC motif M892_10170 608779c753c54f030b08994cd9420384 1049 SMART SM00086 559 597 0.01 T 12-10-2018 IPR001610 PAC motif M892_10170 608779c753c54f030b08994cd9420384 1049 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 604 768 4.0E-34 T 12-10-2018 IPR000160 GGDEF domain M892_10170 608779c753c54f030b08994cd9420384 1049 Pfam PF00563 EAL domain 789 1023 4.2E-55 T 12-10-2018 IPR001633 EAL domain M892_10170 608779c753c54f030b08994cd9420384 1049 Gene3D G3DSA:3.30.70.270 599 768 5.4E-46 T 12-10-2018 M892_10170 608779c753c54f030b08994cd9420384 1049 SMART SM00052 781 1028 1.0E-56 T 12-10-2018 IPR001633 EAL domain M892_10170 608779c753c54f030b08994cd9420384 1049 SMART SM00267 597 769 2.4E-44 T 12-10-2018 IPR000160 GGDEF domain M892_10170 608779c753c54f030b08994cd9420384 1049 SUPERFAMILY SSF141868 787 1035 2.75E-69 T 12-10-2018 IPR035919 EAL domain superfamily M892_10170 608779c753c54f030b08994cd9420384 1049 Pfam PF13426 PAS domain 497 596 7.2E-10 T 12-10-2018 IPR000014 PAS domain M892_10170 608779c753c54f030b08994cd9420384 1049 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 357 481 1.6E-5 T 12-10-2018 IPR000014 PAS domain M892_10170 608779c753c54f030b08994cd9420384 1049 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 484 604 2.6E-15 T 12-10-2018 IPR000014 PAS domain M892_10170 608779c753c54f030b08994cd9420384 1049 SUPERFAMILY SSF55785 471 595 3.14E-19 T 12-10-2018 IPR035965 PAS domain superfamily M892_13380 54f75c2d1e40b7b1ff8c052370081558 86 SUPERFAMILY SSF109910 3 79 6.67E-26 T 12-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily M892_13380 54f75c2d1e40b7b1ff8c052370081558 86 Pfam PF03937 Flavinator of succinate dehydrogenase 7 77 2.8E-24 T 12-10-2018 IPR005631 Flavinator of succinate dehydrogenase M892_13380 54f75c2d1e40b7b1ff8c052370081558 86 Gene3D G3DSA:1.10.150.250 1 86 2.3E-37 T 12-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily M892_26865 bda62991b4179bbac4f5a93ec299bd3f 817 Gene3D G3DSA:3.40.50.2000 5 474 6.1E-194 T 12-10-2018 M892_26865 bda62991b4179bbac4f5a93ec299bd3f 817 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 10 812 0.0 T 12-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 M892_26865 bda62991b4179bbac4f5a93ec299bd3f 817 Gene3D G3DSA:3.40.50.2000 475 797 3.6E-139 T 12-10-2018 M892_26865 bda62991b4179bbac4f5a93ec299bd3f 817 Pfam PF00343 Carbohydrate phosphorylase 99 812 0.0 T 12-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 M892_26865 bda62991b4179bbac4f5a93ec299bd3f 817 SUPERFAMILY SSF53756 8 815 0.0 T 12-10-2018 M892_26865 bda62991b4179bbac4f5a93ec299bd3f 817 PIRSF PIRSF000460 1 817 6.7E-213 T 12-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 M892_26865 bda62991b4179bbac4f5a93ec299bd3f 817 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 656 668 - T 12-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 M892_21515 8c3fe672943230ce3016653ba3fc14b6 96 Pfam PF13551 Winged helix-turn helix 32 85 2.5E-8 T 12-10-2018 M892_21515 8c3fe672943230ce3016653ba3fc14b6 96 Gene3D G3DSA:1.10.10.10 12 78 4.3E-5 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_21515 8c3fe672943230ce3016653ba3fc14b6 96 SUPERFAMILY SSF46689 15 95 1.73E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_26610 5bbcdc76a8a45e31db9ea341184ab2ee 120 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site M892_26610 5bbcdc76a8a45e31db9ea341184ab2ee 120 Pfam PF00460 Flagella basal body rod protein 11 38 2.7E-7 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 M892_26610 5bbcdc76a8a45e31db9ea341184ab2ee 120 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 5 118 4.8E-34 T 12-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 M892_26610 5bbcdc76a8a45e31db9ea341184ab2ee 120 PIRSF PIRSF002889 1 120 1.3E-33 T 12-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 M892_15880 0d4875bb5121a34f5acf52ad54bdd03e 602 SUPERFAMILY SSF53649 255 584 2.04E-50 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 M892_15880 0d4875bb5121a34f5acf52ad54bdd03e 602 Gene3D G3DSA:3.40.720.10 248 527 3.3E-39 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 M892_15880 0d4875bb5121a34f5acf52ad54bdd03e 602 PIRSF PIRSF004950 6 600 2.7E-248 T 12-10-2018 IPR012159 Inner membrane protein YejM M892_15880 0d4875bb5121a34f5acf52ad54bdd03e 602 Pfam PF00884 Sulfatase 270 515 7.9E-22 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 M892_15880 0d4875bb5121a34f5acf52ad54bdd03e 602 Pfam PF11893 Domain of unknown function (DUF3413) 6 250 5.4E-98 T 12-10-2018 IPR024588 Inner membrane protein YejM, N-terminal M892_07780 fe1fb34c643aa9f7adbb149798dd00a0 304 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 1 301 39.061 T 12-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 M892_07780 fe1fb34c643aa9f7adbb149798dd00a0 304 Pfam PF04381 Putative exonuclease, RdgC 1 298 4.6E-125 T 12-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 M892_14770 4951e2bf27e8fe3b4e7c6be20a7dd3fd 372 SUPERFAMILY SSF56672 19 256 2.58E-92 T 12-10-2018 M892_14770 4951e2bf27e8fe3b4e7c6be20a7dd3fd 372 Gene3D G3DSA:3.30.1490.100 259 371 1.1E-25 T 12-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 M892_14770 4951e2bf27e8fe3b4e7c6be20a7dd3fd 372 Pfam PF11798 IMS family HHH motif 188 218 8.4E-6 T 12-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 M892_14770 4951e2bf27e8fe3b4e7c6be20a7dd3fd 372 Pfam PF00817 impB/mucB/samB family 29 176 1.1E-48 T 12-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 M892_14770 4951e2bf27e8fe3b4e7c6be20a7dd3fd 372 Gene3D G3DSA:2.30.40.20 33 90 6.2E-27 T 12-10-2018 M892_14770 4951e2bf27e8fe3b4e7c6be20a7dd3fd 372 SUPERFAMILY SSF100879 263 371 1.43E-24 T 12-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 M892_14770 4951e2bf27e8fe3b4e7c6be20a7dd3fd 372 Hamap MF_01113 DNA polymerase IV [dinB]. 23 371 36.96 T 12-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 M892_14770 4951e2bf27e8fe3b4e7c6be20a7dd3fd 372 Pfam PF11799 impB/mucB/samB family C-terminal domain 259 359 1.4E-6 T 12-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 M892_14770 4951e2bf27e8fe3b4e7c6be20a7dd3fd 372 Gene3D G3DSA:1.10.150.20 192 250 2.1E-15 T 12-10-2018 M892_14770 4951e2bf27e8fe3b4e7c6be20a7dd3fd 372 Gene3D G3DSA:3.30.70.270 91 191 2.4E-38 T 12-10-2018 M892_00075 1ef71b0849cba071c07021e097874e78 475 Pfam PF00209 Sodium:neurotransmitter symporter family 9 119 1.5E-22 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 M892_00075 1ef71b0849cba071c07021e097874e78 475 Pfam PF00209 Sodium:neurotransmitter symporter family 149 446 2.0E-32 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 M892_00075 1ef71b0849cba071c07021e097874e78 475 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 90 116 4.4E-13 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 M892_00075 1ef71b0849cba071c07021e097874e78 475 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 46 65 4.4E-13 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 M892_00075 1ef71b0849cba071c07021e097874e78 475 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 314 334 4.4E-13 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 M892_00075 1ef71b0849cba071c07021e097874e78 475 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 17 38 4.4E-13 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 M892_00075 1ef71b0849cba071c07021e097874e78 475 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 33 47 - T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 M892_00075 1ef71b0849cba071c07021e097874e78 475 SUPERFAMILY SSF161070 9 456 2.62E-129 T 12-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 M892_22140 9aa3922e4915c217f0dadcff20100abf 421 Pfam PF00271 Helicase conserved C-terminal domain 237 341 2.4E-27 T 12-10-2018 IPR001650 Helicase, C-terminal M892_22140 9aa3922e4915c217f0dadcff20100abf 421 SMART SM00490 261 342 2.5E-31 T 12-10-2018 IPR001650 Helicase, C-terminal M892_22140 9aa3922e4915c217f0dadcff20100abf 421 SUPERFAMILY SSF52540 78 363 1.73E-76 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_22140 9aa3922e4915c217f0dadcff20100abf 421 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 156 164 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site M892_22140 9aa3922e4915c217f0dadcff20100abf 421 Gene3D G3DSA:3.40.50.300 5 213 2.5E-77 T 12-10-2018 M892_22140 9aa3922e4915c217f0dadcff20100abf 421 Gene3D G3DSA:3.40.50.300 215 385 5.8E-47 T 12-10-2018 M892_22140 9aa3922e4915c217f0dadcff20100abf 421 SMART SM00487 26 225 5.0E-62 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain M892_22140 9aa3922e4915c217f0dadcff20100abf 421 Pfam PF00270 DEAD/DEAH box helicase 31 198 8.7E-54 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 M892_05325 8f42d5b5db9ddeec848cc441c078f433 335 Gene3D G3DSA:2.40.160.10 21 335 9.2E-21 T 12-10-2018 IPR023614 Porin domain superfamily M892_05325 8f42d5b5db9ddeec848cc441c078f433 335 SUPERFAMILY SSF56935 31 335 2.38E-28 T 12-10-2018 M892_05325 8f42d5b5db9ddeec848cc441c078f433 335 Pfam PF13609 Gram-negative porin 7 313 5.9E-22 T 12-10-2018 M892_01600 d3b6c066af5db19289f1c3246f170c14 306 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 198 1.0E-62 T 12-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 M892_01600 d3b6c066af5db19289f1c3246f170c14 306 Gene3D G3DSA:3.30.160.110 114 149 1.6E-14 T 12-10-2018 M892_01600 d3b6c066af5db19289f1c3246f170c14 306 SUPERFAMILY SSF51735 1 113 3.23E-26 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_01600 d3b6c066af5db19289f1c3246f170c14 306 Pfam PF14824 Sirohaem biosynthesis protein central 120 146 2.0E-7 T 12-10-2018 IPR028281 Siroheme synthase, central domain KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 M892_01600 d3b6c066af5db19289f1c3246f170c14 306 Pfam PF10414 Sirohaem synthase dimerisation region 151 204 3.1E-13 T 12-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 M892_01600 d3b6c066af5db19289f1c3246f170c14 306 Gene3D G3DSA:3.40.50.720 1 113 2.6E-35 T 12-10-2018 M892_01600 d3b6c066af5db19289f1c3246f170c14 306 SUPERFAMILY SSF75615 115 199 3.4E-25 T 12-10-2018 M892_01600 d3b6c066af5db19289f1c3246f170c14 306 Gene3D G3DSA:1.10.8.210 150 211 1.2E-9 T 12-10-2018 IPR037115 Sirohaem synthase, dimerisation domain superfamily GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 M892_01600 d3b6c066af5db19289f1c3246f170c14 306 Pfam PF13241 Putative NAD(P)-binding 6 116 1.4E-31 T 12-10-2018 M892_02140 d35214f1d95582b2f414aac02a71eeda 114 Pfam PF12290 Protein of unknown function (DUF3802) 2 110 2.6E-43 T 12-10-2018 IPR020979 Uncharacterised protein family A0KLC6 M892_09065 0b2e144fccb4e6ffd0ea01ba30956199 284 SUPERFAMILY SSF103481 43 141 1.44E-13 T 12-10-2018 M892_09065 0b2e144fccb4e6ffd0ea01ba30956199 284 Pfam PF00892 EamA-like transporter family 143 268 1.2E-9 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M892_09065 0b2e144fccb4e6ffd0ea01ba30956199 284 Pfam PF00892 EamA-like transporter family 6 137 3.7E-15 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M892_09065 0b2e144fccb4e6ffd0ea01ba30956199 284 SUPERFAMILY SSF103481 178 271 9.94E-14 T 12-10-2018 M892_01165 e99748f74c343d7a1d4d3ffcbfcada66 128 ProDom PD080544 SYNTHASE 4.2.1.- LYASE L-ECTOINE DEHYDRATASE N-ACETYLDIAMINOBUTYRATE ECTOINE ENZYME SYNTHASE:ECTOINE ECTC 1 118 9.0E-58 T 12-10-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108 M892_01165 e99748f74c343d7a1d4d3ffcbfcada66 128 Gene3D G3DSA:2.60.120.10 1 116 1.2E-44 T 12-10-2018 IPR014710 RmlC-like jelly roll fold M892_01165 e99748f74c343d7a1d4d3ffcbfcada66 128 Pfam PF06339 Ectoine synthase 1 127 1.4E-60 T 12-10-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108 M892_01165 e99748f74c343d7a1d4d3ffcbfcada66 128 Hamap MF_01255 L-ectoine synthase [ectC]. 1 128 38.935 T 12-10-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108 M892_01165 e99748f74c343d7a1d4d3ffcbfcada66 128 SUPERFAMILY SSF51182 10 127 6.83E-26 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily M892_07605 a7b72f6069c543b0b6db03029524f56e 64 SUPERFAMILY SSF140319 1 62 2.09E-28 T 12-10-2018 IPR036762 IscX-like superfamily M892_07605 a7b72f6069c543b0b6db03029524f56e 64 Gene3D G3DSA:1.10.10.600 1 64 1.4E-29 T 12-10-2018 IPR036762 IscX-like superfamily M892_07605 a7b72f6069c543b0b6db03029524f56e 64 Pfam PF04384 Iron-sulphur cluster assembly 1 63 4.2E-34 T 12-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 M892_07605 a7b72f6069c543b0b6db03029524f56e 64 PIRSF PIRSF039003 1 64 5.0E-34 T 12-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 M892_07605 a7b72f6069c543b0b6db03029524f56e 64 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 2 64 4.2E-35 T 12-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 M892_09745 053e48bb79f1839c300e7dc31a9db035 773 Gene3D G3DSA:3.30.420.140 325 451 6.6E-157 T 12-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 M892_09745 053e48bb79f1839c300e7dc31a9db035 773 SMART SM00732 326 424 2.5E-38 T 12-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 M892_09745 053e48bb79f1839c300e7dc31a9db035 773 SUPERFAMILY SSF47781 470 557 8.89E-26 T 12-10-2018 IPR010994 RuvA domain 2-like M892_09745 053e48bb79f1839c300e7dc31a9db035 773 SUPERFAMILY SSF50249 638 723 2.46E-24 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M892_09745 053e48bb79f1839c300e7dc31a9db035 773 SUPERFAMILY SSF47781 560 632 6.23E-19 T 12-10-2018 IPR010994 RuvA domain 2-like M892_09745 053e48bb79f1839c300e7dc31a9db035 773 Pfam PF00575 S1 RNA binding domain 649 720 7.4E-21 T 12-10-2018 IPR003029 S1 domain GO:0003676 M892_09745 053e48bb79f1839c300e7dc31a9db035 773 Gene3D G3DSA:1.10.3500.10 112 498 6.6E-157 T 12-10-2018 IPR023323 Tex-like domain superfamily M892_09745 053e48bb79f1839c300e7dc31a9db035 773 Pfam PF12836 Helix-hairpin-helix motif 491 555 1.2E-26 T 12-10-2018 M892_09745 053e48bb79f1839c300e7dc31a9db035 773 SUPERFAMILY SSF158832 3 321 1.7E-120 T 12-10-2018 M892_09745 053e48bb79f1839c300e7dc31a9db035 773 Gene3D G3DSA:1.10.150.310 499 630 3.3E-49 T 12-10-2018 M892_09745 053e48bb79f1839c300e7dc31a9db035 773 SMART SM00316 649 720 1.2E-24 T 12-10-2018 IPR022967 RNA-binding domain, S1 M892_09745 053e48bb79f1839c300e7dc31a9db035 773 Pfam PF09371 Tex-like protein N-terminal domain 9 191 1.5E-71 T 12-10-2018 IPR018974 Tex-like protein, N-terminal M892_09745 053e48bb79f1839c300e7dc31a9db035 773 SUPERFAMILY SSF53098 322 469 5.92E-51 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_09745 053e48bb79f1839c300e7dc31a9db035 773 Gene3D G3DSA:2.40.50.140 631 725 6.1E-29 T 12-10-2018 M892_09745 053e48bb79f1839c300e7dc31a9db035 773 Pfam PF16921 Tex protein YqgF-like domain 327 451 8.9E-56 T 12-10-2018 IPR032639 Tex protein, YqgF-like domain M892_09745 053e48bb79f1839c300e7dc31a9db035 773 Gene3D G3DSA:1.10.10.650 2 109 3.0E-42 T 12-10-2018 IPR023319 Tex-like protein, HTH domain superfamily M892_19810 aabc2e31d2d283cfcdeb3ea0fc86df6d 363 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 3 340 2.1E-97 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 M892_19810 aabc2e31d2d283cfcdeb3ea0fc86df6d 363 Gene3D G3DSA:3.20.20.70 1 363 3.0E-140 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M892_19810 aabc2e31d2d283cfcdeb3ea0fc86df6d 363 SUPERFAMILY SSF51395 1 363 7.66E-124 T 12-10-2018 M892_14345 86fb3b71bbb6fadafa341ee3246db41e 260 Pfam PF00437 Type II/IV secretion system protein 42 260 6.9E-57 T 12-10-2018 IPR001482 Type II/IV secretion system protein M892_14345 86fb3b71bbb6fadafa341ee3246db41e 260 Gene3D G3DSA:3.30.450.380 2 137 1.8E-36 T 12-10-2018 M892_14345 86fb3b71bbb6fadafa341ee3246db41e 260 SUPERFAMILY SSF52540 21 260 3.84E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_14345 86fb3b71bbb6fadafa341ee3246db41e 260 Gene3D G3DSA:3.40.50.300 139 260 4.9E-46 T 12-10-2018 M892_02150 60f9d40aa70afe288105e8fd0ba0a488 322 Gene3D G3DSA:3.40.1550.10 139 320 2.3E-22 T 12-10-2018 IPR028976 CheC-like superfamily M892_02150 60f9d40aa70afe288105e8fd0ba0a488 322 SUPERFAMILY SSF52172 1 115 1.71E-28 T 12-10-2018 IPR011006 CheY-like superfamily M892_02150 60f9d40aa70afe288105e8fd0ba0a488 322 Pfam PF00072 Response regulator receiver domain 3 110 3.7E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_02150 60f9d40aa70afe288105e8fd0ba0a488 322 SMART SM00448 1 113 2.4E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_02150 60f9d40aa70afe288105e8fd0ba0a488 322 Gene3D G3DSA:3.40.50.2300 1 119 4.7E-29 T 12-10-2018 M892_02150 60f9d40aa70afe288105e8fd0ba0a488 322 SUPERFAMILY SSF103039 141 320 2.49E-30 T 12-10-2018 IPR028976 CheC-like superfamily M892_21260 67fd314ee97932ea3a725eb4b56b1f3a 305 Gene3D G3DSA:3.40.1190.20 1 301 5.9E-107 T 12-10-2018 IPR029056 Ribokinase-like M892_21260 67fd314ee97932ea3a725eb4b56b1f3a 305 Pfam PF00294 pfkB family carbohydrate kinase 1 294 6.6E-76 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB M892_21260 67fd314ee97932ea3a725eb4b56b1f3a 305 SUPERFAMILY SSF53613 1 302 3.59E-87 T 12-10-2018 IPR029056 Ribokinase-like M892_21260 67fd314ee97932ea3a725eb4b56b1f3a 305 PRINTS PR00990 Ribokinase signature 33 52 2.1E-35 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 M892_21260 67fd314ee97932ea3a725eb4b56b1f3a 305 PRINTS PR00990 Ribokinase signature 173 188 2.1E-35 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 M892_21260 67fd314ee97932ea3a725eb4b56b1f3a 305 PRINTS PR00990 Ribokinase signature 217 228 2.1E-35 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 M892_21260 67fd314ee97932ea3a725eb4b56b1f3a 305 PRINTS PR00990 Ribokinase signature 6 27 2.1E-35 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 M892_21260 67fd314ee97932ea3a725eb4b56b1f3a 305 PRINTS PR00990 Ribokinase signature 105 118 2.1E-35 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 M892_21260 67fd314ee97932ea3a725eb4b56b1f3a 305 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 5 300 5.5E-113 T 12-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 M892_21260 67fd314ee97932ea3a725eb4b56b1f3a 305 Hamap MF_01987 Ribokinase [rbsK]. 2 301 26.548 T 12-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 M892_21260 67fd314ee97932ea3a725eb4b56b1f3a 305 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 246 259 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 M892_09195 4a8e027edf593979c60b380a74d4b34d 110 Pfam PF00237 Ribosomal protein L22p/L17e 5 107 1.2E-39 T 12-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 M892_09195 4a8e027edf593979c60b380a74d4b34d 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 29.662 T 12-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_09195 4a8e027edf593979c60b380a74d4b34d 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 2.0E-50 T 12-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_09195 4a8e027edf593979c60b380a74d4b34d 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 12-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_09195 4a8e027edf593979c60b380a74d4b34d 110 Gene3D G3DSA:3.90.470.10 1 110 2.1E-48 T 12-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 M892_09195 4a8e027edf593979c60b380a74d4b34d 110 SUPERFAMILY SSF54843 1 109 7.85E-45 T 12-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 M892_11545 658063ba8af35c7d02aef270bb0220c3 269 SUPERFAMILY SSF55811 71 257 8.12E-44 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 M892_11545 658063ba8af35c7d02aef270bb0220c3 269 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 110 138 4.8E-9 T 12-10-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 M892_11545 658063ba8af35c7d02aef270bb0220c3 269 Hamap MF_00297 NADH pyrophosphatase [nudC]. 12 268 42.017 T 12-10-2018 IPR022925 NADH pyrophosphatase NudC GO:0000210 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 M892_11545 658063ba8af35c7d02aef270bb0220c3 269 ProSitePatterns PS00893 Nudix box signature. 173 194 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 M892_11545 658063ba8af35c7d02aef270bb0220c3 269 Gene3D G3DSA:3.90.79.10 140 268 2.1E-40 T 12-10-2018 M892_11545 658063ba8af35c7d02aef270bb0220c3 269 Pfam PF00293 NUDIX domain 146 247 3.5E-18 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 M892_11545 658063ba8af35c7d02aef270bb0220c3 269 Gene3D G3DSA:3.90.79.20 4 139 1.6E-32 T 12-10-2018 M892_00300 6a0685e6244cd860fe62686d02d67b2d 514 Pfam PF13005 zinc-finger binding domain of transposase IS66 120 164 1.6E-16 T 12-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 M892_00300 6a0685e6244cd860fe62686d02d67b2d 514 Pfam PF13817 IS66 C-terminal element 474 510 7.6E-8 T 12-10-2018 IPR039552 Transposase IS66, C-terminal M892_00300 6a0685e6244cd860fe62686d02d67b2d 514 Pfam PF13007 Transposase C of IS166 homeodomain 42 112 2.2E-14 T 12-10-2018 IPR024463 Transposase TnpC, homeodomain M892_00300 6a0685e6244cd860fe62686d02d67b2d 514 Pfam PF03050 Transposase IS66 family 184 467 3.0E-101 T 12-10-2018 IPR004291 Transposase, IS66 M892_14310 6a0685e6244cd860fe62686d02d67b2d 514 Pfam PF13005 zinc-finger binding domain of transposase IS66 120 164 1.6E-16 T 12-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 M892_14310 6a0685e6244cd860fe62686d02d67b2d 514 Pfam PF13817 IS66 C-terminal element 474 510 7.6E-8 T 12-10-2018 IPR039552 Transposase IS66, C-terminal M892_14310 6a0685e6244cd860fe62686d02d67b2d 514 Pfam PF13007 Transposase C of IS166 homeodomain 42 112 2.2E-14 T 12-10-2018 IPR024463 Transposase TnpC, homeodomain M892_14310 6a0685e6244cd860fe62686d02d67b2d 514 Pfam PF03050 Transposase IS66 family 184 467 3.0E-101 T 12-10-2018 IPR004291 Transposase, IS66 M892_25255 6a0685e6244cd860fe62686d02d67b2d 514 Pfam PF13005 zinc-finger binding domain of transposase IS66 120 164 1.6E-16 T 12-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 M892_25255 6a0685e6244cd860fe62686d02d67b2d 514 Pfam PF13817 IS66 C-terminal element 474 510 7.6E-8 T 12-10-2018 IPR039552 Transposase IS66, C-terminal M892_25255 6a0685e6244cd860fe62686d02d67b2d 514 Pfam PF13007 Transposase C of IS166 homeodomain 42 112 2.2E-14 T 12-10-2018 IPR024463 Transposase TnpC, homeodomain M892_25255 6a0685e6244cd860fe62686d02d67b2d 514 Pfam PF03050 Transposase IS66 family 184 467 3.0E-101 T 12-10-2018 IPR004291 Transposase, IS66 M892_11770 d4d0f58969749cb3ef2cb26269a86330 210 SUPERFAMILY SSF53098 27 198 7.19E-35 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_11770 d4d0f58969749cb3ef2cb26269a86330 210 SMART SM00479 29 202 1.5E-26 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III M892_11770 d4d0f58969749cb3ef2cb26269a86330 210 Pfam PF00929 Exonuclease 31 193 4.1E-20 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III M892_11770 d4d0f58969749cb3ef2cb26269a86330 210 Gene3D G3DSA:3.30.420.10 23 201 9.3E-34 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M892_05255 62135f3205ae35dc5667dceeb3719ece 876 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 603 628 8.0E-6 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 M892_05255 62135f3205ae35dc5667dceeb3719ece 876 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 713 750 4.5E-9 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 M892_05255 62135f3205ae35dc5667dceeb3719ece 876 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 737 54.296 T 12-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 M892_05255 62135f3205ae35dc5667dceeb3719ece 876 Pfam PF01131 DNA topoisomerase 164 571 2.6E-126 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 M892_05255 62135f3205ae35dc5667dceeb3719ece 876 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 316 330 - T 12-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 M892_05255 62135f3205ae35dc5667dceeb3719ece 876 SUPERFAMILY SSF57783 749 812 2.72E-19 T 12-10-2018 M892_05255 62135f3205ae35dc5667dceeb3719ece 876 Pfam PF08272 Topoisomerase I zinc-ribbon-like 829 869 3.0E-17 T 12-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 M892_05255 62135f3205ae35dc5667dceeb3719ece 876 Pfam PF08272 Topoisomerase I zinc-ribbon-like 762 798 2.9E-11 T 12-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 M892_05255 62135f3205ae35dc5667dceeb3719ece 876 Gene3D G3DSA:2.70.20.10 220 479 1.1E-160 T 12-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 M892_05255 62135f3205ae35dc5667dceeb3719ece 876 SMART SM00436 140 228 2.0E-46 T 12-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 M892_05255 62135f3205ae35dc5667dceeb3719ece 876 Gene3D G3DSA:1.10.290.10 287 411 1.1E-160 T 12-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 M892_05255 62135f3205ae35dc5667dceeb3719ece 876 SUPERFAMILY SSF56712 3 615 4.71E-198 T 12-10-2018 IPR023405 DNA topoisomerase, type IA, core domain M892_05255 62135f3205ae35dc5667dceeb3719ece 876 Gene3D G3DSA:2.20.25.10 813 870 7.0E-26 T 12-10-2018 M892_05255 62135f3205ae35dc5667dceeb3719ece 876 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 640 9.7E-248 T 12-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 M892_05255 62135f3205ae35dc5667dceeb3719ece 876 SMART SM00493 3 139 8.2E-35 T 12-10-2018 IPR006171 TOPRIM domain M892_05255 62135f3205ae35dc5667dceeb3719ece 876 Gene3D G3DSA:3.40.50.140 1 170 2.9E-66 T 12-10-2018 M892_05255 62135f3205ae35dc5667dceeb3719ece 876 Pfam PF01751 Toprim domain 5 149 1.2E-32 T 12-10-2018 IPR006171 TOPRIM domain M892_05255 62135f3205ae35dc5667dceeb3719ece 876 SUPERFAMILY SSF57783 814 870 3.57E-20 T 12-10-2018 M892_05255 62135f3205ae35dc5667dceeb3719ece 876 Gene3D G3DSA:1.10.460.10 172 577 1.1E-160 T 12-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 M892_05255 62135f3205ae35dc5667dceeb3719ece 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 198 216 3.6E-36 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 M892_05255 62135f3205ae35dc5667dceeb3719ece 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 113 126 3.6E-36 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 M892_05255 62135f3205ae35dc5667dceeb3719ece 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 321 330 3.6E-36 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 M892_05255 62135f3205ae35dc5667dceeb3719ece 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 397 413 3.6E-36 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 M892_05255 62135f3205ae35dc5667dceeb3719ece 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 496 510 3.6E-36 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 M892_05255 62135f3205ae35dc5667dceeb3719ece 876 SMART SM00437 279 533 8.4E-119 T 12-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 M892_05255 62135f3205ae35dc5667dceeb3719ece 876 Gene3D G3DSA:3.30.65.10 750 812 4.2E-32 T 12-10-2018 M892_05255 62135f3205ae35dc5667dceeb3719ece 876 Gene3D G3DSA:3.30.65.10 703 749 2.8E-6 T 12-10-2018 M892_05255 62135f3205ae35dc5667dceeb3719ece 876 SUPERFAMILY SSF57783 705 747 2.21E-5 T 12-10-2018 M892_08565 01855705059d7ba2a12e71f699037511 228 SUPERFAMILY SSF109755 31 218 8.89E-15 T 12-10-2018 M892_08565 01855705059d7ba2a12e71f699037511 228 TIGRFAM TIGR00153 TIGR00153: TIGR00153 family protein 6 227 6.2E-66 T 12-10-2018 IPR002727 Protein of unknown function DUF47 M892_08565 01855705059d7ba2a12e71f699037511 228 Pfam PF01865 Protein of unknown function DUF47 9 225 3.9E-64 T 12-10-2018 IPR018445 Putative phosphate transport regulator M892_08565 01855705059d7ba2a12e71f699037511 228 Gene3D G3DSA:1.20.58.220 2 227 6.9E-65 T 12-10-2018 IPR038078 PhoU-like domain superfamily M892_14590 7ee6bde437c61693f267d385b7b8c48b 1164 PIRSF PIRSF000980 8 1162 0.0 T 12-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 M892_14590 7ee6bde437c61693f267d385b7b8c48b 1164 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 9 1124 0.0 T 12-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 M892_14590 7ee6bde437c61693f267d385b7b8c48b 1164 Gene3D G3DSA:3.40.50.300 346 818 8.3E-194 T 12-10-2018 M892_14590 7ee6bde437c61693f267d385b7b8c48b 1164 SUPERFAMILY SSF52980 845 1149 2.2E-77 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 M892_14590 7ee6bde437c61693f267d385b7b8c48b 1164 Gene3D G3DSA:1.10.486.10 464 676 8.3E-194 T 12-10-2018 M892_14590 7ee6bde437c61693f267d385b7b8c48b 1164 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 9 817 0.0 T 12-10-2018 M892_14590 7ee6bde437c61693f267d385b7b8c48b 1164 Gene3D G3DSA:3.40.50.10930 11 328 7.9E-127 T 12-10-2018 M892_14590 7ee6bde437c61693f267d385b7b8c48b 1164 SUPERFAMILY SSF52540 9 358 5.84E-125 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_14590 7ee6bde437c61693f267d385b7b8c48b 1164 Gene3D G3DSA:1.10.10.160 86 194 7.9E-127 T 12-10-2018 IPR013986 DExx box DNA helicase domain superfamily M892_14590 7ee6bde437c61693f267d385b7b8c48b 1164 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 8 1156 21.031 T 12-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 M892_14590 7ee6bde437c61693f267d385b7b8c48b 1164 SUPERFAMILY SSF52540 378 823 3.01E-103 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_14590 7ee6bde437c61693f267d385b7b8c48b 1164 Gene3D G3DSA:1.10.10.990 885 963 2.7E-21 T 12-10-2018 M892_28735 4924b7ed9fb6181d018cc7df42ff981c 490 SUPERFAMILY SSF56672 80 406 2.28E-49 T 12-10-2018 M892_28735 4924b7ed9fb6181d018cc7df42ff981c 490 Pfam PF08388 Group II intron, maturase-specific domain 342 416 1.5E-22 T 12-10-2018 IPR013597 Group II intron, maturase-specific M892_28735 4924b7ed9fb6181d018cc7df42ff981c 490 Pfam PF13655 N-terminal domain of reverse transcriptase 16 97 2.5E-31 T 12-10-2018 IPR025960 Reverse transcriptase, N-terminal domain M892_28735 4924b7ed9fb6181d018cc7df42ff981c 490 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 60 403 3.3E-108 T 12-10-2018 IPR030931 Group II intron reverse transcriptase/maturase M892_28735 4924b7ed9fb6181d018cc7df42ff981c 490 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 112 321 1.6E-42 T 12-10-2018 IPR000477 Reverse transcriptase domain M892_26565 ac0f54c61c6818bc416abddf901c3400 457 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 2 456 5.1E-122 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 M892_26565 ac0f54c61c6818bc416abddf901c3400 457 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 408 456 4.0E-7 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain M892_26565 ac0f54c61c6818bc416abddf901c3400 457 PRINTS PR01005 Flagellar hook-associated protein signature 10 33 7.2E-7 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 M892_26565 ac0f54c61c6818bc416abddf901c3400 457 PRINTS PR01005 Flagellar hook-associated protein signature 122 142 7.2E-7 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 M892_26565 ac0f54c61c6818bc416abddf901c3400 457 PRINTS PR01005 Flagellar hook-associated protein signature 213 231 7.2E-7 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 M892_26565 ac0f54c61c6818bc416abddf901c3400 457 PRINTS PR01005 Flagellar hook-associated protein signature 155 179 7.2E-7 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 M892_26565 ac0f54c61c6818bc416abddf901c3400 457 SUPERFAMILY SSF64518 133 457 3.92E-29 T 12-10-2018 M892_26565 ac0f54c61c6818bc416abddf901c3400 457 Pfam PF00460 Flagella basal body rod protein 5 33 1.6E-6 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 M892_22030 aa3f7371970eb64e92acf3f8c6d721cd 331 SUPERFAMILY SSF47413 1 58 6.47E-15 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 M892_22030 aa3f7371970eb64e92acf3f8c6d721cd 331 Pfam PF00356 Bacterial regulatory proteins, lacI family 2 50 4.2E-17 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M892_22030 aa3f7371970eb64e92acf3f8c6d721cd 331 Gene3D G3DSA:3.40.50.2300 155 329 6.8E-28 T 12-10-2018 M892_22030 aa3f7371970eb64e92acf3f8c6d721cd 331 SMART SM00354 1 73 1.8E-25 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M892_22030 aa3f7371970eb64e92acf3f8c6d721cd 331 TIGRFAM TIGR02417 fruct_sucro_rep: D-fructose-responsive transcription factor 2 326 1.1E-148 T 12-10-2018 IPR012781 D-fructose-responsive transcription factor GO:0003677|GO:0006355|GO:0009750 M892_22030 aa3f7371970eb64e92acf3f8c6d721cd 331 Gene3D G3DSA:1.10.260.40 1 61 5.0E-26 T 12-10-2018 M892_22030 aa3f7371970eb64e92acf3f8c6d721cd 331 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 63 249 4.2E-13 T 12-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain M892_22030 aa3f7371970eb64e92acf3f8c6d721cd 331 SUPERFAMILY SSF53822 61 310 6.48E-39 T 12-10-2018 IPR028082 Periplasmic binding protein-like I M892_22030 aa3f7371970eb64e92acf3f8c6d721cd 331 ProSitePatterns PS00356 LacI-type HTH domain signature. 3 21 - T 12-10-2018 M892_22030 aa3f7371970eb64e92acf3f8c6d721cd 331 Gene3D G3DSA:3.40.50.2300 62 154 2.5E-20 T 12-10-2018 M892_04395 50fa45e8db728810e92beec4a21517dd 378 Gene3D G3DSA:2.40.420.20 301 370 5.7E-108 T 12-10-2018 M892_04395 50fa45e8db728810e92beec4a21517dd 378 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 38 372 9.6E-84 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 M892_04395 50fa45e8db728810e92beec4a21517dd 378 Gene3D G3DSA:2.40.50.100 62 206 5.7E-108 T 12-10-2018 M892_04395 50fa45e8db728810e92beec4a21517dd 378 Gene3D G3DSA:1.10.287.470 97 170 5.7E-108 T 12-10-2018 M892_04395 50fa45e8db728810e92beec4a21517dd 378 Gene3D G3DSA:2.40.30.170 50 300 5.7E-108 T 12-10-2018 M892_04395 50fa45e8db728810e92beec4a21517dd 378 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 63 290 7.7E-17 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain M892_04395 50fa45e8db728810e92beec4a21517dd 378 SUPERFAMILY SSF111369 50 297 3.79E-80 T 12-10-2018 M892_00385 b2191f5b7ebf9e6753bcb73659f18285 646 Gene3D G3DSA:3.40.50.2300 1 136 2.0E-7 T 12-10-2018 M892_00385 b2191f5b7ebf9e6753bcb73659f18285 646 SUPERFAMILY SSF55874 482 640 3.27E-34 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_00385 b2191f5b7ebf9e6753bcb73659f18285 646 Gene3D G3DSA:2.60.120.10 137 318 8.3E-20 T 12-10-2018 IPR014710 RmlC-like jelly roll fold M892_00385 b2191f5b7ebf9e6753bcb73659f18285 646 SUPERFAMILY SSF47384 335 375 1.0E-6 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M892_00385 b2191f5b7ebf9e6753bcb73659f18285 646 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 530 640 2.1E-22 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_00385 b2191f5b7ebf9e6753bcb73659f18285 646 Pfam PF00027 Cyclic nucleotide-binding domain 202 289 1.2E-15 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain M892_00385 b2191f5b7ebf9e6753bcb73659f18285 646 SUPERFAMILY SSF52172 3 143 7.16E-7 T 12-10-2018 IPR011006 CheY-like superfamily M892_00385 b2191f5b7ebf9e6753bcb73659f18285 646 Pfam PF00512 His Kinase A (phospho-acceptor) domain 340 367 1.1E-6 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M892_00385 b2191f5b7ebf9e6753bcb73659f18285 646 SMART SM00387 528 641 4.6E-28 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_00385 b2191f5b7ebf9e6753bcb73659f18285 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 625 638 1.9E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_00385 b2191f5b7ebf9e6753bcb73659f18285 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 601 619 1.9E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_00385 b2191f5b7ebf9e6753bcb73659f18285 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 569 583 1.9E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_00385 b2191f5b7ebf9e6753bcb73659f18285 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 587 597 1.9E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_00385 b2191f5b7ebf9e6753bcb73659f18285 646 Gene3D G3DSA:3.30.565.10 491 645 7.6E-38 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_00385 b2191f5b7ebf9e6753bcb73659f18285 646 SUPERFAMILY SSF51206 201 311 1.83E-19 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like M892_13855 6457fb6016f259e401ecafad78a2652d 287 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 4 286 39.915 T 12-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 M892_13855 6457fb6016f259e401ecafad78a2652d 287 PRINTS PR00987 Glutamyl-tRNA synthetase signature 182 190 1.0E-13 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 M892_13855 6457fb6016f259e401ecafad78a2652d 287 PRINTS PR00987 Glutamyl-tRNA synthetase signature 7 19 1.0E-13 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 M892_13855 6457fb6016f259e401ecafad78a2652d 287 PRINTS PR00987 Glutamyl-tRNA synthetase signature 166 176 1.0E-13 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 M892_13855 6457fb6016f259e401ecafad78a2652d 287 PRINTS PR00987 Glutamyl-tRNA synthetase signature 21 32 1.0E-13 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 M892_13855 6457fb6016f259e401ecafad78a2652d 287 PRINTS PR00987 Glutamyl-tRNA synthetase signature 36 49 1.0E-13 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 M892_13855 6457fb6016f259e401ecafad78a2652d 287 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 126 265 8.9E-15 T 12-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 M892_13855 6457fb6016f259e401ecafad78a2652d 287 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 7 108 2.5E-27 T 12-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 M892_13855 6457fb6016f259e401ecafad78a2652d 287 Gene3D G3DSA:3.40.50.620 4 280 4.3E-105 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M892_13855 6457fb6016f259e401ecafad78a2652d 287 SUPERFAMILY SSF52374 4 280 8.73E-84 T 12-10-2018 M892_13855 6457fb6016f259e401ecafad78a2652d 287 Gene3D G3DSA:3.40.50.620 79 214 4.3E-105 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M892_13855 6457fb6016f259e401ecafad78a2652d 287 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 4 267 4.1E-111 T 12-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 M892_14190 ca505a2b6783a3c4c5815ffc34351d91 529 PRINTS PR00315 GTP-binding elongation factor signature 65 73 3.3E-10 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M892_14190 ca505a2b6783a3c4c5815ffc34351d91 529 PRINTS PR00315 GTP-binding elongation factor signature 15 28 3.3E-10 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M892_14190 ca505a2b6783a3c4c5815ffc34351d91 529 PRINTS PR00315 GTP-binding elongation factor signature 85 95 3.3E-10 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M892_14190 ca505a2b6783a3c4c5815ffc34351d91 529 PRINTS PR00315 GTP-binding elongation factor signature 137 146 3.3E-10 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M892_14190 ca505a2b6783a3c4c5815ffc34351d91 529 Gene3D G3DSA:3.40.50.300 72 379 1.3E-113 T 12-10-2018 M892_14190 ca505a2b6783a3c4c5815ffc34351d91 529 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 4 527 51.809 T 12-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 M892_14190 ca505a2b6783a3c4c5815ffc34351d91 529 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 154 4.6E-19 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 M892_14190 ca505a2b6783a3c4c5815ffc34351d91 529 Pfam PF16658 Class II release factor RF3, C-terminal domain 387 514 2.0E-46 T 12-10-2018 IPR032090 Peptide chain release factor 3, C-terminal M892_14190 ca505a2b6783a3c4c5815ffc34351d91 529 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 6 529 4.5E-300 T 12-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 M892_14190 ca505a2b6783a3c4c5815ffc34351d91 529 Pfam PF03144 Elongation factor Tu domain 2 314 380 1.2E-7 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 M892_14190 ca505a2b6783a3c4c5815ffc34351d91 529 SUPERFAMILY SSF50447 262 393 5.3E-27 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily M892_14190 ca505a2b6783a3c4c5815ffc34351d91 529 Gene3D G3DSA:3.30.70.3280 390 529 1.5E-52 T 12-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily M892_14190 ca505a2b6783a3c4c5815ffc34351d91 529 Gene3D G3DSA:3.40.50.300 110 275 1.3E-113 T 12-10-2018 M892_14190 ca505a2b6783a3c4c5815ffc34351d91 529 SUPERFAMILY SSF52540 10 277 6.04E-85 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_14190 ca505a2b6783a3c4c5815ffc34351d91 529 Pfam PF00009 Elongation factor Tu GTP binding domain 13 277 5.0E-46 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M892_14190 ca505a2b6783a3c4c5815ffc34351d91 529 SUPERFAMILY SSF54980 393 468 2.81E-17 T 12-10-2018 IPR035647 EF-G domain III/V-like M892_14190 ca505a2b6783a3c4c5815ffc34351d91 529 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site M892_12190 7d8e14eb54e21d14f53a830f8c822fc7 247 Gene3D G3DSA:3.40.1280.10 78 244 1.2E-63 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal M892_12190 7d8e14eb54e21d14f53a830f8c822fc7 247 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 4 243 2.7E-85 T 12-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 M892_12190 7d8e14eb54e21d14f53a830f8c822fc7 247 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 3 244 42.974 T 12-10-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB M892_12190 7d8e14eb54e21d14f53a830f8c822fc7 247 Pfam PF00588 SpoU rRNA Methylase family 97 237 1.9E-39 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 M892_12190 7d8e14eb54e21d14f53a830f8c822fc7 247 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 5 79 5.4E-19 T 12-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 M892_12190 7d8e14eb54e21d14f53a830f8c822fc7 247 SUPERFAMILY SSF55315 3 77 2.83E-19 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like M892_12190 7d8e14eb54e21d14f53a830f8c822fc7 247 Gene3D G3DSA:3.30.1330.30 1 77 1.6E-25 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like M892_12190 7d8e14eb54e21d14f53a830f8c822fc7 247 SMART SM00967 5 81 5.2E-19 T 12-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 M892_12190 7d8e14eb54e21d14f53a830f8c822fc7 247 SUPERFAMILY SSF75217 69 244 1.37E-48 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases M892_24395 fb5c78690554d4610ead4d796b5360d9 69 SMART SM00357 6 69 6.3E-32 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 M892_24395 fb5c78690554d4610ead4d796b5360d9 69 SUPERFAMILY SSF50249 4 68 9.55E-25 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M892_24395 fb5c78690554d4610ead4d796b5360d9 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 36 - T 12-10-2018 IPR019844 Cold-shock conserved site M892_24395 fb5c78690554d4610ead4d796b5360d9 69 PIRSF PIRSF002599 1 69 4.0E-24 T 12-10-2018 IPR012156 Cold shock, CspA GO:0003676 M892_24395 fb5c78690554d4610ead4d796b5360d9 69 Pfam PF00313 'Cold-shock' DNA-binding domain 6 68 3.6E-30 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 M892_24395 fb5c78690554d4610ead4d796b5360d9 69 PRINTS PR00050 Cold shock protein signature 42 60 4.3E-18 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 M892_24395 fb5c78690554d4610ead4d796b5360d9 69 PRINTS PR00050 Cold shock protein signature 7 22 4.3E-18 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 M892_24395 fb5c78690554d4610ead4d796b5360d9 69 PRINTS PR00050 Cold shock protein signature 27 36 4.3E-18 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 M892_24395 fb5c78690554d4610ead4d796b5360d9 69 Gene3D G3DSA:2.40.50.140 4 68 6.2E-30 T 12-10-2018 M892_21265 db19baeaf5ccb253233690410d415f20 336 Gene3D G3DSA:1.10.260.40 3 60 4.9E-22 T 12-10-2018 M892_21265 db19baeaf5ccb253233690410d415f20 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 4.7E-6 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M892_21265 db19baeaf5ccb253233690410d415f20 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 4.7E-6 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M892_21265 db19baeaf5ccb253233690410d415f20 336 SUPERFAMILY SSF53822 61 332 4.91E-94 T 12-10-2018 IPR028082 Periplasmic binding protein-like I M892_21265 db19baeaf5ccb253233690410d415f20 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 46 3.1E-19 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M892_21265 db19baeaf5ccb253233690410d415f20 336 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 12-10-2018 M892_21265 db19baeaf5ccb253233690410d415f20 336 Gene3D G3DSA:3.40.50.2300 162 291 2.2E-87 T 12-10-2018 M892_21265 db19baeaf5ccb253233690410d415f20 336 SMART SM00354 1 72 6.3E-34 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M892_21265 db19baeaf5ccb253233690410d415f20 336 Pfam PF13377 Periplasmic binding protein-like domain 171 331 1.4E-39 T 12-10-2018 M892_21265 db19baeaf5ccb253233690410d415f20 336 SUPERFAMILY SSF47413 1 60 1.31E-15 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 M892_21265 db19baeaf5ccb253233690410d415f20 336 Gene3D G3DSA:3.40.50.2300 70 323 2.2E-87 T 12-10-2018 M892_14700 c3adf4f0dde65260fcc759bf825f68d3 181 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 56 73 - T 12-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 M892_14700 c3adf4f0dde65260fcc759bf825f68d3 181 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 22 178 2.9E-43 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 M892_14700 c3adf4f0dde65260fcc759bf825f68d3 181 Gene3D G3DSA:2.40.100.10 18 181 1.2E-58 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily M892_14700 c3adf4f0dde65260fcc759bf825f68d3 181 SUPERFAMILY SSF50891 18 180 1.61E-52 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily M892_14700 c3adf4f0dde65260fcc759bf825f68d3 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 5.8E-11 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 M892_14700 c3adf4f0dde65260fcc759bf825f68d3 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 61 73 5.8E-11 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 M892_14700 c3adf4f0dde65260fcc759bf825f68d3 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 35 50 5.8E-11 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 M892_14700 c3adf4f0dde65260fcc759bf825f68d3 181 PIRSF PIRSF001467 6 181 1.5E-24 T 12-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 M892_04360 3ef3936222ea9f588b2f0905b82ae8ba 714 Pfam PF07715 TonB-dependent Receptor Plug Domain 49 154 2.2E-19 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain M892_04360 3ef3936222ea9f588b2f0905b82ae8ba 714 Gene3D G3DSA:2.40.170.20 167 714 5.2E-44 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily M892_04360 3ef3936222ea9f588b2f0905b82ae8ba 714 SUPERFAMILY SSF56935 29 714 1.74E-82 T 12-10-2018 M892_04360 3ef3936222ea9f588b2f0905b82ae8ba 714 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 42 - T 12-10-2018 IPR010916 TonB box, conserved site M892_04360 3ef3936222ea9f588b2f0905b82ae8ba 714 Pfam PF00593 TonB dependent receptor 287 712 8.4E-30 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel M892_04360 3ef3936222ea9f588b2f0905b82ae8ba 714 Gene3D G3DSA:2.170.130.10 26 165 9.9E-27 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily M892_02055 f1f2af68b0b3d4008e9ef0a84458240d 195 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 5 190 30.12 T 12-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 M892_02055 f1f2af68b0b3d4008e9ef0a84458240d 195 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 8 188 1.9E-73 T 12-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 M892_02055 f1f2af68b0b3d4008e9ef0a84458240d 195 Pfam PF12804 MobA-like NTP transferase domain 10 158 1.5E-33 T 12-10-2018 IPR025877 MobA-like NTP transferase M892_02055 f1f2af68b0b3d4008e9ef0a84458240d 195 Gene3D G3DSA:3.90.550.10 3 193 8.9E-58 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M892_02055 f1f2af68b0b3d4008e9ef0a84458240d 195 SUPERFAMILY SSF53448 7 189 3.69E-35 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M892_21130 5a9ea535ed19d1d871191a4da83fe6aa 218 SUPERFAMILY SSF55469 6 216 1.7E-54 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 M892_21130 5a9ea535ed19d1d871191a4da83fe6aa 218 Pfam PF00881 Nitroreductase family 10 193 1.8E-18 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 M892_21130 5a9ea535ed19d1d871191a4da83fe6aa 218 Gene3D G3DSA:3.40.109.10 1 217 3.8E-50 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 M892_02905 869a6ac045b497cb0111f18e84525925 235 Gene3D G3DSA:3.40.1410.10 89 224 5.1E-31 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily M892_02905 869a6ac045b497cb0111f18e84525925 235 SMART SM00345 9 68 1.6E-16 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M892_02905 869a6ac045b497cb0111f18e84525925 235 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 68 2.5E-16 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M892_02905 869a6ac045b497cb0111f18e84525925 235 SMART SM00866 91 228 1.7E-27 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 M892_02905 869a6ac045b497cb0111f18e84525925 235 Pfam PF07702 UTRA domain 92 228 1.2E-32 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 M892_02905 869a6ac045b497cb0111f18e84525925 235 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 4 233 2.8E-91 T 12-10-2018 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 M892_02905 869a6ac045b497cb0111f18e84525925 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 1.2E-5 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M892_02905 869a6ac045b497cb0111f18e84525925 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 1.2E-5 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M892_02905 869a6ac045b497cb0111f18e84525925 235 SUPERFAMILY SSF46785 3 72 1.63E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_02905 869a6ac045b497cb0111f18e84525925 235 SUPERFAMILY SSF64288 56 231 1.04E-36 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily M892_02905 869a6ac045b497cb0111f18e84525925 235 Gene3D G3DSA:1.10.10.10 1 69 8.5E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_12450 f010ba0376a82d9bfe505345f112c78e 302 SUPERFAMILY SSF46785 1 86 4.75E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_12450 f010ba0376a82d9bfe505345f112c78e 302 SUPERFAMILY SSF53850 89 294 2.31E-40 T 12-10-2018 M892_12450 f010ba0376a82d9bfe505345f112c78e 302 Pfam PF03466 LysR substrate binding domain 89 291 5.1E-44 T 12-10-2018 IPR005119 LysR, substrate-binding M892_12450 f010ba0376a82d9bfe505345f112c78e 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.0E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_12450 f010ba0376a82d9bfe505345f112c78e 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.0E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_12450 f010ba0376a82d9bfe505345f112c78e 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.0E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_12450 f010ba0376a82d9bfe505345f112c78e 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.3E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_12450 f010ba0376a82d9bfe505345f112c78e 302 Gene3D G3DSA:1.10.10.10 1 84 1.7E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_12450 f010ba0376a82d9bfe505345f112c78e 302 Gene3D G3DSA:3.40.190.10 91 281 2.2E-66 T 12-10-2018 M892_12450 f010ba0376a82d9bfe505345f112c78e 302 Gene3D G3DSA:3.40.190.10 164 267 2.2E-66 T 12-10-2018 M892_07090 0b1f99cdf739490e972940a796dfbc4b 321 Pfam PF02769 AIR synthase related protein, C-terminal domain 149 303 7.8E-10 T 12-10-2018 IPR010918 PurM-like, C-terminal domain M892_07090 0b1f99cdf739490e972940a796dfbc4b 321 SUPERFAMILY SSF55326 3 137 1.44E-32 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily M892_07090 0b1f99cdf739490e972940a796dfbc4b 321 SUPERFAMILY SSF56042 141 307 1.79E-33 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily M892_07090 0b1f99cdf739490e972940a796dfbc4b 321 Pfam PF00586 AIR synthase related protein, N-terminal domain 28 137 1.8E-20 T 12-10-2018 IPR016188 PurM-like, N-terminal domain M892_07090 0b1f99cdf739490e972940a796dfbc4b 321 Gene3D G3DSA:3.30.1330.10 1 143 9.1E-41 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily M892_07090 0b1f99cdf739490e972940a796dfbc4b 321 PIRSF PIRSF005303 1 320 2.1E-79 T 12-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 M892_07090 0b1f99cdf739490e972940a796dfbc4b 321 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 2 320 26.631 T 12-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 M892_07090 0b1f99cdf739490e972940a796dfbc4b 321 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 3 320 4.7E-101 T 12-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 M892_07090 0b1f99cdf739490e972940a796dfbc4b 321 Gene3D G3DSA:3.90.650.10 144 320 2.1E-48 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily M892_02315 1726e0acc8eae06e452f5feb1d12db43 827 SMART SM00091 325 392 2.2E-4 T 12-10-2018 IPR000014 PAS domain M892_02315 1726e0acc8eae06e452f5feb1d12db43 827 SMART SM00448 705 817 6.1E-19 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_02315 1726e0acc8eae06e452f5feb1d12db43 827 SMART SM00387 572 686 5.3E-36 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_02315 1726e0acc8eae06e452f5feb1d12db43 827 SMART SM00388 460 525 1.3E-20 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M892_02315 1726e0acc8eae06e452f5feb1d12db43 827 Gene3D G3DSA:1.10.287.130 436 523 4.1E-23 T 12-10-2018 M892_02315 1726e0acc8eae06e452f5feb1d12db43 827 SUPERFAMILY SSF47384 447 525 1.94E-18 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M892_02315 1726e0acc8eae06e452f5feb1d12db43 827 Gene3D G3DSA:3.40.50.2300 703 827 1.4E-29 T 12-10-2018 M892_02315 1726e0acc8eae06e452f5feb1d12db43 827 SUPERFAMILY SSF55785 334 439 7.85E-23 T 12-10-2018 IPR035965 PAS domain superfamily M892_02315 1726e0acc8eae06e452f5feb1d12db43 827 SMART SM00086 398 440 1.3E-6 T 12-10-2018 IPR001610 PAC motif M892_02315 1726e0acc8eae06e452f5feb1d12db43 827 Pfam PF13426 PAS domain 336 439 2.2E-20 T 12-10-2018 IPR000014 PAS domain M892_02315 1726e0acc8eae06e452f5feb1d12db43 827 Pfam PF00512 His Kinase A (phospho-acceptor) domain 460 524 1.5E-16 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M892_02315 1726e0acc8eae06e452f5feb1d12db43 827 PRINTS PR00344 Bacterial sensor protein C-terminal signature 668 681 2.9E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_02315 1726e0acc8eae06e452f5feb1d12db43 827 PRINTS PR00344 Bacterial sensor protein C-terminal signature 609 623 2.9E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_02315 1726e0acc8eae06e452f5feb1d12db43 827 PRINTS PR00344 Bacterial sensor protein C-terminal signature 644 662 2.9E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_02315 1726e0acc8eae06e452f5feb1d12db43 827 PRINTS PR00344 Bacterial sensor protein C-terminal signature 627 637 2.9E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_02315 1726e0acc8eae06e452f5feb1d12db43 827 Gene3D G3DSA:3.30.565.10 526 685 3.0E-44 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_02315 1726e0acc8eae06e452f5feb1d12db43 827 Gene3D G3DSA:3.30.450.20 313 435 1.4E-28 T 12-10-2018 M892_02315 1726e0acc8eae06e452f5feb1d12db43 827 SUPERFAMILY SSF52172 704 822 4.7E-28 T 12-10-2018 IPR011006 CheY-like superfamily M892_02315 1726e0acc8eae06e452f5feb1d12db43 827 SUPERFAMILY SSF55874 514 681 9.17E-42 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_02315 1726e0acc8eae06e452f5feb1d12db43 827 Pfam PF00072 Response regulator receiver domain 708 817 1.2E-19 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_02315 1726e0acc8eae06e452f5feb1d12db43 827 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 572 682 1.2E-30 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_02315 1726e0acc8eae06e452f5feb1d12db43 827 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 323 446 3.1E-12 T 12-10-2018 IPR000014 PAS domain M892_13520 e4ee32b20d2c9b93f2599f43f79a6a50 328 Pfam PF00140 Sigma-70 factor, region 1.2 51 84 4.0E-12 T 12-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 M892_13520 e4ee32b20d2c9b93f2599f43f79a6a50 328 Gene3D G3DSA:1.10.601.10 3 158 9.6E-48 T 12-10-2018 M892_13520 e4ee32b20d2c9b93f2599f43f79a6a50 328 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 113 126 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 M892_13520 e4ee32b20d2c9b93f2599f43f79a6a50 328 PRINTS PR00046 Major sigma-70 factor signature 282 297 6.2E-28 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 M892_13520 e4ee32b20d2c9b93f2599f43f79a6a50 328 PRINTS PR00046 Major sigma-70 factor signature 261 273 6.2E-28 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 M892_13520 e4ee32b20d2c9b93f2599f43f79a6a50 328 PRINTS PR00046 Major sigma-70 factor signature 297 308 6.2E-28 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 M892_13520 e4ee32b20d2c9b93f2599f43f79a6a50 328 PRINTS PR00046 Major sigma-70 factor signature 137 145 6.2E-28 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 M892_13520 e4ee32b20d2c9b93f2599f43f79a6a50 328 PRINTS PR00046 Major sigma-70 factor signature 113 126 6.2E-28 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 M892_13520 e4ee32b20d2c9b93f2599f43f79a6a50 328 SUPERFAMILY SSF88659 162 235 2.09E-16 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like M892_13520 e4ee32b20d2c9b93f2599f43f79a6a50 328 Pfam PF04539 Sigma-70 region 3 169 242 2.5E-22 T 12-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 M892_13520 e4ee32b20d2c9b93f2599f43f79a6a50 328 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 2 323 39.575 T 12-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 M892_13520 e4ee32b20d2c9b93f2599f43f79a6a50 328 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 85 312 3.5E-36 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 M892_13520 e4ee32b20d2c9b93f2599f43f79a6a50 328 Pfam PF04545 Sigma-70, region 4 257 310 2.2E-17 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 M892_13520 e4ee32b20d2c9b93f2599f43f79a6a50 328 SUPERFAMILY SSF88659 219 318 1.87E-24 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like M892_13520 e4ee32b20d2c9b93f2599f43f79a6a50 328 Gene3D G3DSA:1.10.10.10 239 319 2.9E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_13520 e4ee32b20d2c9b93f2599f43f79a6a50 328 Gene3D G3DSA:1.10.10.10 162 237 3.8E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_13520 e4ee32b20d2c9b93f2599f43f79a6a50 328 SUPERFAMILY SSF88946 50 159 9.42E-46 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 M892_13520 e4ee32b20d2c9b93f2599f43f79a6a50 328 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 44 323 5.5E-139 T 12-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 M892_13520 e4ee32b20d2c9b93f2599f43f79a6a50 328 Pfam PF04542 Sigma-70 region 2 89 158 6.8E-20 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 M892_13520 e4ee32b20d2c9b93f2599f43f79a6a50 328 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 282 308 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 M892_05745 95472d8306d7597beed3e1173c2adb77 93 Pfam PF02371 Transposase IS116/IS110/IS902 family 1 80 9.2E-19 T 12-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 M892_09135 66bf604a6395b32ef031fc55bd014857 167 Gene3D G3DSA:3.30.160.20 2 73 1.2E-31 T 12-10-2018 M892_09135 66bf604a6395b32ef031fc55bd014857 167 Pfam PF00333 Ribosomal protein S5, N-terminal domain 12 75 6.1E-29 T 12-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 M892_09135 66bf604a6395b32ef031fc55bd014857 167 SUPERFAMILY SSF54768 8 76 5.86E-24 T 12-10-2018 M892_09135 66bf604a6395b32ef031fc55bd014857 167 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 163 3.0E-69 T 12-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 M892_09135 66bf604a6395b32ef031fc55bd014857 167 SUPERFAMILY SSF54211 80 159 4.05E-27 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold M892_09135 66bf604a6395b32ef031fc55bd014857 167 ProSitePatterns PS00585 Ribosomal protein S5 signature. 29 61 - T 12-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site M892_09135 66bf604a6395b32ef031fc55bd014857 167 Pfam PF03719 Ribosomal protein S5, C-terminal domain 88 158 2.6E-30 T 12-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 M892_09135 66bf604a6395b32ef031fc55bd014857 167 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 164 34.556 T 12-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 M892_09135 66bf604a6395b32ef031fc55bd014857 167 Gene3D G3DSA:3.30.230.10 75 167 6.2E-37 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M892_13430 0b66ecd515fe0c3fa6ffab89f1b8ef26 320 Pfam PF07650 KH domain 227 304 4.3E-21 T 12-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_13430 0b66ecd515fe0c3fa6ffab89f1b8ef26 320 Gene3D G3DSA:3.40.50.300 20 202 3.9E-51 T 12-10-2018 M892_13430 0b66ecd515fe0c3fa6ffab89f1b8ef26 320 TIGRFAM TIGR00436 era: GTP-binding protein Era 27 299 1.6E-109 T 12-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_13430 0b66ecd515fe0c3fa6ffab89f1b8ef26 320 Pfam PF01926 50S ribosome-binding GTPase 29 143 2.8E-23 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 M892_13430 0b66ecd515fe0c3fa6ffab89f1b8ef26 320 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 26 187 7.4E-38 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 M892_13430 0b66ecd515fe0c3fa6ffab89f1b8ef26 320 SUPERFAMILY SSF52540 29 224 2.03E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_13430 0b66ecd515fe0c3fa6ffab89f1b8ef26 320 Gene3D G3DSA:3.30.300.20 204 318 2.0E-42 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta M892_13430 0b66ecd515fe0c3fa6ffab89f1b8ef26 320 Hamap MF_00367 GTPase Era [era]. 24 316 35.6 T 12-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_13430 0b66ecd515fe0c3fa6ffab89f1b8ef26 320 SUPERFAMILY SSF54814 200 316 2.35E-41 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 M892_23565 85205345e5fa135754841ed5cd48e19a 190 PIRSF PIRSF029811 1 190 3.1E-49 T 12-10-2018 IPR027016 Uncharacterised protein with YceI domain M892_23565 85205345e5fa135754841ed5cd48e19a 190 SMART SM00867 24 189 3.2E-19 T 12-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like M892_23565 85205345e5fa135754841ed5cd48e19a 190 SUPERFAMILY SSF101874 24 190 2.22E-24 T 12-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily M892_23565 85205345e5fa135754841ed5cd48e19a 190 Gene3D G3DSA:2.40.128.110 20 190 2.8E-43 T 12-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily M892_23565 85205345e5fa135754841ed5cd48e19a 190 Pfam PF04264 YceI-like domain 25 188 4.8E-15 T 12-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like M892_21480 355694497fe2edf964dca866353cda0e 205 SUPERFAMILY SSF56784 7 195 4.59E-33 T 12-10-2018 IPR036412 HAD-like superfamily M892_21480 355694497fe2edf964dca866353cda0e 205 Gene3D G3DSA:3.40.50.1000 10 186 4.1E-37 T 12-10-2018 IPR023214 HAD superfamily M892_21480 355694497fe2edf964dca866353cda0e 205 Gene3D G3DSA:1.10.150.240 22 87 4.1E-37 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 M892_21480 355694497fe2edf964dca866353cda0e 205 Pfam PF13419 Haloacid dehalogenase-like hydrolase 87 186 2.8E-10 T 12-10-2018 M892_21480 355694497fe2edf964dca866353cda0e 205 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 126 186 2.9E-10 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M892_07825 98cb55e223acba57f1c992cd36ca09da 143 Pfam PF13358 DDE superfamily endonuclease 9 111 8.7E-20 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_07825 98cb55e223acba57f1c992cd36ca09da 143 Gene3D G3DSA:3.30.420.470 21 137 4.6E-13 T 12-10-2018 M892_07725 98cb55e223acba57f1c992cd36ca09da 143 Pfam PF13358 DDE superfamily endonuclease 9 111 8.7E-20 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_07725 98cb55e223acba57f1c992cd36ca09da 143 Gene3D G3DSA:3.30.420.470 21 137 4.6E-13 T 12-10-2018 M892_02480 98cb55e223acba57f1c992cd36ca09da 143 Pfam PF13358 DDE superfamily endonuclease 9 111 8.7E-20 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_02480 98cb55e223acba57f1c992cd36ca09da 143 Gene3D G3DSA:3.30.420.470 21 137 4.6E-13 T 12-10-2018 M892_07815 98cb55e223acba57f1c992cd36ca09da 143 Pfam PF13358 DDE superfamily endonuclease 9 111 8.7E-20 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_07815 98cb55e223acba57f1c992cd36ca09da 143 Gene3D G3DSA:3.30.420.470 21 137 4.6E-13 T 12-10-2018 M892_13545 10174acf74893933fe8630018199a0c7 155 Gene3D G3DSA:1.10.10.10 58 101 4.0E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_13545 10174acf74893933fe8630018199a0c7 155 Gene3D G3DSA:1.10.10.10 104 151 1.3E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_13545 10174acf74893933fe8630018199a0c7 155 Hamap MF_01114 Regulatory protein RecX [recX]. 2 155 14.001 T 12-10-2018 IPR003783 Regulatory protein RecX GO:0006282 M892_13545 10174acf74893933fe8630018199a0c7 155 Pfam PF02631 RecX family 34 150 1.9E-30 T 12-10-2018 IPR003783 Regulatory protein RecX GO:0006282 M892_13545 10174acf74893933fe8630018199a0c7 155 Gene3D G3DSA:1.10.10.10 11 50 1.4E-9 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_11945 0d4573e1a65e4a321ebb6a41eb1c8e24 127 Hamap MF_00708 Fumarate reductase subunit C [frdC]. 1 127 26.979 T 12-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 M892_11945 0d4573e1a65e4a321ebb6a41eb1c8e24 127 PIRSF PIRSF000180 1 127 1.3E-57 T 12-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 M892_11945 0d4573e1a65e4a321ebb6a41eb1c8e24 127 SUPERFAMILY SSF81343 1 126 2.83E-52 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 M892_11945 0d4573e1a65e4a321ebb6a41eb1c8e24 127 ProDom PD015900 FUMARATE MEMBRANE REDUCTASE C SUBUNIT TRANSMEMBRANE INNER HYDROPHOBIC REDUCTASE POLYPEPTIDE 7 127 1.0E-54 T 12-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 M892_11945 0d4573e1a65e4a321ebb6a41eb1c8e24 127 Gene3D G3DSA:1.20.1300.10 1 127 2.1E-47 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 M892_11945 0d4573e1a65e4a321ebb6a41eb1c8e24 127 Pfam PF02300 Fumarate reductase subunit C 2 126 7.4E-49 T 12-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 M892_09155 ea556bcdd8ce79a533e221010cf20bb0 101 Pfam PF00253 Ribosomal protein S14p/S29e 48 100 1.3E-24 T 12-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_09155 ea556bcdd8ce79a533e221010cf20bb0 101 SUPERFAMILY SSF57716 2 101 9.27E-37 T 12-10-2018 M892_09155 ea556bcdd8ce79a533e221010cf20bb0 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 12-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_09155 ea556bcdd8ce79a533e221010cf20bb0 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 25.682 T 12-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid M892_09155 ea556bcdd8ce79a533e221010cf20bb0 101 Gene3D G3DSA:4.10.830.10 43 101 5.7E-23 T 12-10-2018 M892_14450 295355593c4436b9c26b668e5cd1fd8c 350 SUPERFAMILY SSF54197 6 179 5.74E-73 T 12-10-2018 IPR036265 HIT-like superfamily M892_14450 295355593c4436b9c26b668e5cd1fd8c 350 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 153 170 - T 12-10-2018 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 M892_14450 295355593c4436b9c26b668e5cd1fd8c 350 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 6 178 2.5E-66 T 12-10-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 M892_14450 295355593c4436b9c26b668e5cd1fd8c 350 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 186 349 2.9E-66 T 12-10-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 M892_14450 295355593c4436b9c26b668e5cd1fd8c 350 SUPERFAMILY SSF54197 181 349 5.1E-55 T 12-10-2018 IPR036265 HIT-like superfamily M892_14450 295355593c4436b9c26b668e5cd1fd8c 350 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 4 349 1.1E-185 T 12-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 M892_14450 295355593c4436b9c26b668e5cd1fd8c 350 Gene3D G3DSA:3.30.428.10 46 177 1.1E-54 T 12-10-2018 IPR036265 HIT-like superfamily M892_14450 295355593c4436b9c26b668e5cd1fd8c 350 Gene3D G3DSA:3.30.428.10 178 350 1.3E-73 T 12-10-2018 IPR036265 HIT-like superfamily M892_14450 295355593c4436b9c26b668e5cd1fd8c 350 PIRSF PIRSF000808 2 345 5.8E-124 T 12-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 M892_20800 bb949e614efbd14c88e04dcab8ec3bd8 276 SUPERFAMILY SSF52821 3 136 3.01E-30 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily M892_20800 bb949e614efbd14c88e04dcab8ec3bd8 276 SMART SM00450 5 128 4.7E-14 T 12-10-2018 IPR001763 Rhodanese-like domain M892_20800 bb949e614efbd14c88e04dcab8ec3bd8 276 SMART SM00450 152 272 1.3E-17 T 12-10-2018 IPR001763 Rhodanese-like domain M892_20800 bb949e614efbd14c88e04dcab8ec3bd8 276 Gene3D G3DSA:3.40.250.10 155 276 2.1E-42 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily M892_20800 bb949e614efbd14c88e04dcab8ec3bd8 276 SUPERFAMILY SSF52821 155 275 1.05E-34 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily M892_20800 bb949e614efbd14c88e04dcab8ec3bd8 276 Gene3D G3DSA:3.40.250.10 1 142 3.3E-36 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily M892_20800 bb949e614efbd14c88e04dcab8ec3bd8 276 Pfam PF00581 Rhodanese-like domain 6 124 7.6E-10 T 12-10-2018 IPR001763 Rhodanese-like domain M892_20800 bb949e614efbd14c88e04dcab8ec3bd8 276 Pfam PF00581 Rhodanese-like domain 154 268 5.6E-12 T 12-10-2018 IPR001763 Rhodanese-like domain M892_20470 f5104718f2593e2662198bbfcfb56bf7 351 PIRSF PIRSF005508 1 351 5.7E-136 T 12-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 M892_20470 f5104718f2593e2662198bbfcfb56bf7 351 Pfam PF01758 Sodium Bile acid symporter family 58 254 1.3E-61 T 12-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 M892_20470 f5104718f2593e2662198bbfcfb56bf7 351 Gene3D G3DSA:1.20.1530.20 3 342 5.5E-23 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily M892_20470 f5104718f2593e2662198bbfcfb56bf7 351 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 13 342 1.3E-137 T 12-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 M892_13060 4031a8b166e5b5d98ddbff9f78e6069b 427 Gene3D G3DSA:3.20.20.370 27 332 5.5E-99 T 12-10-2018 M892_13060 4031a8b166e5b5d98ddbff9f78e6069b 427 SUPERFAMILY SSF88713 19 335 1.68E-24 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 M892_13060 4031a8b166e5b5d98ddbff9f78e6069b 427 SUPERFAMILY SSF51055 383 426 1.31E-14 T 12-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 M892_13060 4031a8b166e5b5d98ddbff9f78e6069b 427 Gene3D G3DSA:2.10.10.90 333 427 3.8E-34 T 12-10-2018 M892_13060 4031a8b166e5b5d98ddbff9f78e6069b 427 Pfam PF01522 Polysaccharide deacetylase 23 120 2.6E-11 T 12-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 M892_13060 4031a8b166e5b5d98ddbff9f78e6069b 427 SMART SM00495 332 378 1.2E-5 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 M892_13060 4031a8b166e5b5d98ddbff9f78e6069b 427 SMART SM00495 381 427 1.4 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 M892_13060 4031a8b166e5b5d98ddbff9f78e6069b 427 SUPERFAMILY SSF51055 334 377 9.81E-14 T 12-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 M892_16355 8d4375ae8b882d153ed8e04ffbd15900 149 Gene3D G3DSA:3.40.50.2300 1 149 4.4E-56 T 12-10-2018 M892_16355 8d4375ae8b882d153ed8e04ffbd15900 149 SUPERFAMILY SSF52788 1 149 1.16E-46 T 12-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily M892_16355 8d4375ae8b882d153ed8e04ffbd15900 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 79 94 5.3E-23 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 M892_16355 8d4375ae8b882d153ed8e04ffbd15900 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 120 135 5.3E-23 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 M892_16355 8d4375ae8b882d153ed8e04ffbd15900 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 4 21 5.3E-23 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 M892_16355 8d4375ae8b882d153ed8e04ffbd15900 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 45 61 5.3E-23 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 M892_16355 8d4375ae8b882d153ed8e04ffbd15900 149 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 5 143 6.8E-36 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I M892_16355 8d4375ae8b882d153ed8e04ffbd15900 149 SMART SM00226 2 148 1.7E-39 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I M892_01535 935f0635c569be7a85e0fa76443c2205 208 Pfam PF00691 OmpA family 87 182 5.4E-19 T 12-10-2018 IPR006665 OmpA-like domain M892_01535 935f0635c569be7a85e0fa76443c2205 208 SUPERFAMILY SSF103647 25 75 1.01E-8 T 12-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 M892_01535 935f0635c569be7a85e0fa76443c2205 208 SUPERFAMILY SSF103088 62 187 1.12E-31 T 12-10-2018 IPR036737 OmpA-like domain superfamily M892_01535 935f0635c569be7a85e0fa76443c2205 208 ProSitePatterns PS00018 EF-hand calcium-binding domain. 45 57 - T 12-10-2018 IPR018247 EF-Hand 1, calcium-binding site M892_01535 935f0635c569be7a85e0fa76443c2205 208 PRINTS PR01021 OMPA domain signature 88 110 1.6E-10 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M892_01535 935f0635c569be7a85e0fa76443c2205 208 PRINTS PR01021 OMPA domain signature 118 133 1.6E-10 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M892_01535 935f0635c569be7a85e0fa76443c2205 208 PRINTS PR01021 OMPA domain signature 133 149 1.6E-10 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M892_01535 935f0635c569be7a85e0fa76443c2205 208 Gene3D G3DSA:3.30.1330.60 62 187 1.4E-31 T 12-10-2018 IPR036737 OmpA-like domain superfamily M892_20700 9dfc951d2b1dd7eacaaf2e655bf55b08 564 SUPERFAMILY SSF55957 432 554 1.96E-15 T 12-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M892_20700 9dfc951d2b1dd7eacaaf2e655bf55b08 564 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 321 438 1.8E-16 T 12-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M892_20700 9dfc951d2b1dd7eacaaf2e655bf55b08 564 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 139 148 - T 12-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M892_20700 9dfc951d2b1dd7eacaaf2e655bf55b08 564 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 41 180 3.6E-40 T 12-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M892_20700 9dfc951d2b1dd7eacaaf2e655bf55b08 564 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 486 545 8.0E-10 T 12-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M892_20700 9dfc951d2b1dd7eacaaf2e655bf55b08 564 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 293 308 2.6E-8 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M892_20700 9dfc951d2b1dd7eacaaf2e655bf55b08 564 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 138 152 2.6E-8 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M892_20700 9dfc951d2b1dd7eacaaf2e655bf55b08 564 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 226 245 2.6E-8 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M892_20700 9dfc951d2b1dd7eacaaf2e655bf55b08 564 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 207 309 4.6E-25 T 12-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M892_20700 9dfc951d2b1dd7eacaaf2e655bf55b08 564 Gene3D G3DSA:3.40.120.10 203 321 1.1E-21 T 12-10-2018 M892_20700 9dfc951d2b1dd7eacaaf2e655bf55b08 564 SUPERFAMILY SSF53738 28 232 6.67E-44 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M892_20700 9dfc951d2b1dd7eacaaf2e655bf55b08 564 Gene3D G3DSA:3.30.310.50 445 556 1.6E-8 T 12-10-2018 M892_20700 9dfc951d2b1dd7eacaaf2e655bf55b08 564 Gene3D G3DSA:3.40.120.10 322 441 3.9E-28 T 12-10-2018 M892_20700 9dfc951d2b1dd7eacaaf2e655bf55b08 564 Gene3D G3DSA:3.40.120.10 33 184 2.7E-46 T 12-10-2018 M892_20700 9dfc951d2b1dd7eacaaf2e655bf55b08 564 SUPERFAMILY SSF53738 204 311 2.71E-22 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M892_20700 9dfc951d2b1dd7eacaaf2e655bf55b08 564 SUPERFAMILY SSF53738 301 443 9.03E-30 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M892_27585 4d2024a5c99b2f1bf6aae24d71dd011a 2482 Pfam PF03534 Salmonella virulence plasmid 65kDa B protein 31 122 1.1E-7 T 12-10-2018 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 M892_27585 4d2024a5c99b2f1bf6aae24d71dd011a 2482 SUPERFAMILY SSF69318 282 562 1.96E-15 T 12-10-2018 M892_27585 4d2024a5c99b2f1bf6aae24d71dd011a 2482 Gene3D G3DSA:2.180.10.10 1220 1534 2.5E-6 T 12-10-2018 M892_27585 4d2024a5c99b2f1bf6aae24d71dd011a 2482 Gene3D G3DSA:2.180.10.10 1710 2146 6.8E-36 T 12-10-2018 M892_27585 4d2024a5c99b2f1bf6aae24d71dd011a 2482 Pfam PF12256 Insecticide toxin TcdB middle/N-terminal region 655 781 1.8E-6 T 12-10-2018 IPR022045 Insecticide toxin TcdB middle/N-terminal M892_27585 4d2024a5c99b2f1bf6aae24d71dd011a 2482 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1392 1425 3.6E-6 T 12-10-2018 IPR006530 YD repeat M892_27585 4d2024a5c99b2f1bf6aae24d71dd011a 2482 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 2058 2147 4.8E-19 T 12-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 M892_27585 4d2024a5c99b2f1bf6aae24d71dd011a 2482 SUPERFAMILY SSF69318 534 683 4.19E-6 T 12-10-2018 M892_27585 4d2024a5c99b2f1bf6aae24d71dd011a 2482 Pfam PF05593 RHS Repeat 1393 1424 1.6E-5 T 12-10-2018 IPR031325 RHS repeat M892_07715 47f1d0567f813a26a3431c420fc1bd2e 247 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 3 207 31.065 T 12-10-2018 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 M892_07715 47f1d0567f813a26a3431c420fc1bd2e 247 Pfam PF03932 CutC family 4 205 4.3E-83 T 12-10-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 M892_07715 47f1d0567f813a26a3431c420fc1bd2e 247 Gene3D G3DSA:3.20.20.380 3 247 1.3E-88 T 12-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 M892_07715 47f1d0567f813a26a3431c420fc1bd2e 247 SUPERFAMILY SSF110395 4 247 1.06E-76 T 12-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 M892_15405 2c0db5e4660ab81d049fa62a6c288dda 161 Pfam PF03100 CcmE 4 136 6.8E-45 T 12-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 M892_15405 2c0db5e4660ab81d049fa62a6c288dda 161 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 146 32.396 T 12-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 M892_15405 2c0db5e4660ab81d049fa62a6c288dda 161 SUPERFAMILY SSF82093 30 142 3.53E-38 T 12-10-2018 IPR036127 CcmE-like superfamily GO:0005886|GO:0017003|GO:0017004 M892_15405 2c0db5e4660ab81d049fa62a6c288dda 161 Gene3D G3DSA:2.40.50.140 30 142 4.8E-40 T 12-10-2018 M892_15115 c8a44f2e599ce3eb4862f734dbc2df13 448 Gene3D G3DSA:1.10.740.10 337 447 1.6E-41 T 12-10-2018 IPR014737 Transposase, Tn5-like, C-terminal M892_15115 c8a44f2e599ce3eb4862f734dbc2df13 448 SUPERFAMILY SSF53098 1 447 9.86E-126 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_15115 c8a44f2e599ce3eb4862f734dbc2df13 448 Pfam PF14706 Transposase DNA-binding 9 65 4.8E-17 T 12-10-2018 IPR014735 Transposase, Tn5-like, N-terminal M892_15115 c8a44f2e599ce3eb4862f734dbc2df13 448 Pfam PF02281 Transposase Tn5 dimerisation domain 358 443 1.8E-17 T 12-10-2018 IPR003201 Transposase Tn5, dimerisation M892_15115 c8a44f2e599ce3eb4862f734dbc2df13 448 Gene3D G3DSA:1.10.246.40 1 65 9.4E-25 T 12-10-2018 IPR038215 Transposase, Tn5-like, N-terminal domain superfamily M892_15115 c8a44f2e599ce3eb4862f734dbc2df13 448 Gene3D G3DSA:3.90.350.10 66 336 1.6E-73 T 12-10-2018 IPR014736 Transposase, Tn5-like, core M892_21475 86b98e6c00957c2a4b965d544504be4c 182 SUPERFAMILY SSF55729 1 151 3.66E-27 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_21475 86b98e6c00957c2a4b965d544504be4c 182 Pfam PF00583 Acetyltransferase (GNAT) family 49 141 1.8E-15 T 12-10-2018 IPR000182 GNAT domain M892_21475 86b98e6c00957c2a4b965d544504be4c 182 Gene3D G3DSA:3.40.630.30 2 169 9.1E-32 T 12-10-2018 M892_23320 dbc018cd55b93b75ea7173c4e8f5e1e1 173 Gene3D G3DSA:2.40.128.20 11 172 6.2E-52 T 12-10-2018 IPR012674 Calycin M892_23320 dbc018cd55b93b75ea7173c4e8f5e1e1 173 PRINTS PR01171 Bacterial lipocalin signature 67 76 3.1E-34 T 12-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 M892_23320 dbc018cd55b93b75ea7173c4e8f5e1e1 173 PRINTS PR01171 Bacterial lipocalin signature 101 115 3.1E-34 T 12-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 M892_23320 dbc018cd55b93b75ea7173c4e8f5e1e1 173 PRINTS PR01171 Bacterial lipocalin signature 31 45 3.1E-34 T 12-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 M892_23320 dbc018cd55b93b75ea7173c4e8f5e1e1 173 PRINTS PR01171 Bacterial lipocalin signature 160 170 3.1E-34 T 12-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 M892_23320 dbc018cd55b93b75ea7173c4e8f5e1e1 173 PRINTS PR01171 Bacterial lipocalin signature 48 64 3.1E-34 T 12-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 M892_23320 dbc018cd55b93b75ea7173c4e8f5e1e1 173 PRINTS PR01171 Bacterial lipocalin signature 133 144 3.1E-34 T 12-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 M892_23320 dbc018cd55b93b75ea7173c4e8f5e1e1 173 Pfam PF08212 Lipocalin-like domain 32 171 1.2E-38 T 12-10-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain M892_23320 dbc018cd55b93b75ea7173c4e8f5e1e1 173 PIRSF PIRSF036893 1 173 6.3E-46 T 12-10-2018 IPR022271 Lipocalin, ApoD type M892_23320 dbc018cd55b93b75ea7173c4e8f5e1e1 173 SUPERFAMILY SSF50814 7 172 3.43E-50 T 12-10-2018 IPR012674 Calycin M892_11325 a3c33c53ef43fa16f887f9fe38015685 284 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 1 284 29.953 T 12-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 M892_11325 a3c33c53ef43fa16f887f9fe38015685 284 Pfam PF01040 UbiA prenyltransferase family 24 266 4.6E-71 T 12-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 M892_11325 a3c33c53ef43fa16f887f9fe38015685 284 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 8 283 3.1E-109 T 12-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 M892_11325 a3c33c53ef43fa16f887f9fe38015685 284 Gene3D G3DSA:1.10.357.140 19 173 2.1E-44 T 12-10-2018 M892_06980 c4b73233c5b7fd05b3a07079b2a9645f 205 Gene3D G3DSA:3.60.21.10 55 205 7.3E-42 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like M892_06980 c4b73233c5b7fd05b3a07079b2a9645f 205 SUPERFAMILY SSF56300 57 205 6.94E-39 T 12-10-2018 M892_06980 c4b73233c5b7fd05b3a07079b2a9645f 205 Pfam PF00149 Calcineurin-like phosphoesterase 65 171 3.6E-7 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 M892_15610 0475f86e556e25e74d7ab95aaf728476 736 Gene3D G3DSA:3.30.300.150 593 718 5.2E-40 T 12-10-2018 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M892_15610 0475f86e556e25e74d7ab95aaf728476 736 SUPERFAMILY SSF48019 243 361 1.36E-32 T 12-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 M892_15610 0475f86e556e25e74d7ab95aaf728476 736 Pfam PF12168 DNA polymerase III subunits tau domain IV DnaB-binding 518 593 1.2E-20 T 12-10-2018 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M892_15610 0475f86e556e25e74d7ab95aaf728476 736 Gene3D G3DSA:1.20.272.10 242 361 1.4E-39 T 12-10-2018 M892_15610 0475f86e556e25e74d7ab95aaf728476 736 SUPERFAMILY SSF52540 32 223 4.66E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_15610 0475f86e556e25e74d7ab95aaf728476 736 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 595 733 1.1E-49 T 12-10-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M892_15610 0475f86e556e25e74d7ab95aaf728476 736 Gene3D G3DSA:1.10.8.60 8 240 6.5E-102 T 12-10-2018 M892_15610 0475f86e556e25e74d7ab95aaf728476 736 Pfam PF13177 DNA polymerase III, delta subunit 20 178 6.2E-44 T 12-10-2018 M892_15610 0475f86e556e25e74d7ab95aaf728476 736 SMART SM00382 37 179 9.4E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_15610 0475f86e556e25e74d7ab95aaf728476 736 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 355 1.2E-133 T 12-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 M892_15610 0475f86e556e25e74d7ab95aaf728476 736 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 233 359 2.7E-32 T 12-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 M892_15610 0475f86e556e25e74d7ab95aaf728476 736 Gene3D G3DSA:3.40.50.300 13 177 6.5E-102 T 12-10-2018 M892_10665 b0f3bc607d4e363c99bd8c75150cc45e 300 SUPERFAMILY SSF53850 89 291 2.17E-23 T 12-10-2018 M892_10665 b0f3bc607d4e363c99bd8c75150cc45e 300 SUPERFAMILY SSF46785 5 86 4.01E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_10665 b0f3bc607d4e363c99bd8c75150cc45e 300 Gene3D G3DSA:3.40.190.290 93 278 4.7E-12 T 12-10-2018 M892_10665 b0f3bc607d4e363c99bd8c75150cc45e 300 Pfam PF03466 LysR substrate binding domain 89 287 9.0E-20 T 12-10-2018 IPR005119 LysR, substrate-binding M892_10665 b0f3bc607d4e363c99bd8c75150cc45e 300 Gene3D G3DSA:1.10.10.10 1 89 1.1E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_10665 b0f3bc607d4e363c99bd8c75150cc45e 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 3.4E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_20020 0f88a8c7b08d6923f3db0152d8404947 1055 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 791 809 - T 12-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site M892_20020 0f88a8c7b08d6923f3db0152d8404947 1055 Gene3D G3DSA:2.150.10.10 610 758 4.2E-24 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal M892_20020 0f88a8c7b08d6923f3db0152d8404947 1055 Gene3D G3DSA:2.150.10.10 859 1014 1.1E-23 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal M892_20020 0f88a8c7b08d6923f3db0152d8404947 1055 Gene3D G3DSA:2.150.10.10 810 858 1.0E-12 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal M892_20020 0f88a8c7b08d6923f3db0152d8404947 1055 SUPERFAMILY SSF51120 551 750 1.15E-26 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal M892_20020 0f88a8c7b08d6923f3db0152d8404947 1055 Pfam PF06594 Haemolysin-type calcium binding protein related domain 713 749 3.9E-6 T 12-10-2018 IPR010566 Haemolysin-type calcium binding-related M892_20020 0f88a8c7b08d6923f3db0152d8404947 1055 Pfam PF06594 Haemolysin-type calcium binding protein related domain 962 998 1.3E-6 T 12-10-2018 IPR010566 Haemolysin-type calcium binding-related M892_20020 0f88a8c7b08d6923f3db0152d8404947 1055 SUPERFAMILY SSF51120 773 971 1.22E-29 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal M892_20020 0f88a8c7b08d6923f3db0152d8404947 1055 Gene3D G3DSA:2.150.10.10 759 809 1.4E-13 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal M892_20020 0f88a8c7b08d6923f3db0152d8404947 1055 PRINTS PR00313 NodO calcium binding signature 868 877 4.1E-11 T 12-10-2018 M892_20020 0f88a8c7b08d6923f3db0152d8404947 1055 PRINTS PR00313 NodO calcium binding signature 650 661 4.1E-11 T 12-10-2018 M892_20020 0f88a8c7b08d6923f3db0152d8404947 1055 PRINTS PR00313 NodO calcium binding signature 804 812 4.1E-11 T 12-10-2018 M892_20020 0f88a8c7b08d6923f3db0152d8404947 1055 PRINTS PR00313 NodO calcium binding signature 795 803 4.1E-11 T 12-10-2018 M892_20020 0f88a8c7b08d6923f3db0152d8404947 1055 Gene3D G3DSA:2.150.10.10 533 609 8.1E-15 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal M892_20020 0f88a8c7b08d6923f3db0152d8404947 1055 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 861 875 0.2 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 M892_20020 0f88a8c7b08d6923f3db0152d8404947 1055 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 652 666 0.071 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 M892_20020 0f88a8c7b08d6923f3db0152d8404947 1055 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 777 793 0.042 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 M892_20020 0f88a8c7b08d6923f3db0152d8404947 1055 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 813 829 0.0074 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 M892_20020 0f88a8c7b08d6923f3db0152d8404947 1055 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 831 847 0.0058 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 M892_20020 0f88a8c7b08d6923f3db0152d8404947 1055 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 590 607 0.0076 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 M892_20020 0f88a8c7b08d6923f3db0152d8404947 1055 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 574 589 7.4E-4 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 M892_20020 0f88a8c7b08d6923f3db0152d8404947 1055 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 794 811 0.0026 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 M892_20020 0f88a8c7b08d6923f3db0152d8404947 1055 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 554 571 4.7 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 M892_20020 0f88a8c7b08d6923f3db0152d8404947 1055 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 901 915 0.071 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 M892_20020 0f88a8c7b08d6923f3db0152d8404947 1055 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 612 626 0.2 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 M892_20020 0f88a8c7b08d6923f3db0152d8404947 1055 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 782 800 - T 12-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site M892_19380 c4533bbd1954e2cd5c05e17b540d5c8f 826 Gene3D G3DSA:2.70.98.10 40 403 7.8E-216 T 12-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 M892_19380 c4533bbd1954e2cd5c05e17b540d5c8f 826 Gene3D G3DSA:1.20.1050.60 404 512 7.8E-216 T 12-10-2018 M892_19380 c4533bbd1954e2cd5c05e17b540d5c8f 826 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 16 815 6.0E-164 T 12-10-2018 IPR005887 Alpha-1,2-mannosidase, putative M892_19380 c4533bbd1954e2cd5c05e17b540d5c8f 826 Pfam PF07971 Glycosyl hydrolase family 92 281 815 1.8E-141 T 12-10-2018 IPR012939 Glycosyl hydrolase family 92 M892_19380 c4533bbd1954e2cd5c05e17b540d5c8f 826 Gene3D G3DSA:3.30.2080.10 338 816 7.8E-216 T 12-10-2018 M892_19380 c4533bbd1954e2cd5c05e17b540d5c8f 826 SUPERFAMILY SSF48208 312 795 1.12E-18 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 M892_19380 c4533bbd1954e2cd5c05e17b540d5c8f 826 Gene3D G3DSA:1.20.1610.10 513 691 7.8E-216 T 12-10-2018 M892_12650 0d7380aa2ff89d0240caee7182c51aac 1226 SUPERFAMILY SSF56507 903 1225 2.75E-130 T 12-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 M892_12650 0d7380aa2ff89d0240caee7182c51aac 1226 SUPERFAMILY SSF47644 654 740 2.22E-29 T 12-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 M892_12650 0d7380aa2ff89d0240caee7182c51aac 1226 SUPERFAMILY SSF52242 744 895 3.4E-45 T 12-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 M892_12650 0d7380aa2ff89d0240caee7182c51aac 1226 Gene3D G3DSA:3.40.50.280 745 896 8.3E-56 T 12-10-2018 M892_12650 0d7380aa2ff89d0240caee7182c51aac 1226 Pfam PF02607 B12 binding domain 660 734 9.7E-26 T 12-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 M892_12650 0d7380aa2ff89d0240caee7182c51aac 1226 Gene3D G3DSA:1.10.288.10 938 1094 8.3E-144 T 12-10-2018 M892_12650 0d7380aa2ff89d0240caee7182c51aac 1226 Gene3D G3DSA:3.20.20.330 2 340 1.6E-130 T 12-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 M892_12650 0d7380aa2ff89d0240caee7182c51aac 1226 Gene3D G3DSA:3.20.20.20 341 643 1.8E-130 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 M892_12650 0d7380aa2ff89d0240caee7182c51aac 1226 SMART SM01018 658 741 9.7E-46 T 12-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 M892_12650 0d7380aa2ff89d0240caee7182c51aac 1226 Pfam PF02574 Homocysteine S-methyltransferase 18 325 6.5E-82 T 12-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 M892_12650 0d7380aa2ff89d0240caee7182c51aac 1226 SUPERFAMILY SSF51717 357 631 6.93E-88 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 M892_12650 0d7380aa2ff89d0240caee7182c51aac 1226 Gene3D G3DSA:1.10.1240.10 650 738 1.0E-40 T 12-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 M892_12650 0d7380aa2ff89d0240caee7182c51aac 1226 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 940 1210 7.0E-122 T 12-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 M892_12650 0d7380aa2ff89d0240caee7182c51aac 1226 Pfam PF00809 Pterin binding enzyme 361 599 1.7E-59 T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 M892_12650 0d7380aa2ff89d0240caee7182c51aac 1226 SUPERFAMILY SSF82282 8 400 3.92E-119 T 12-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 M892_12650 0d7380aa2ff89d0240caee7182c51aac 1226 Pfam PF02310 B12 binding domain 749 842 3.5E-18 T 12-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 M892_12650 0d7380aa2ff89d0240caee7182c51aac 1226 Gene3D G3DSA:3.10.196.10 909 1224 8.3E-144 T 12-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 M892_12650 0d7380aa2ff89d0240caee7182c51aac 1226 PIRSF PIRSF000381 3 1197 0.0 T 12-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 M892_12650 0d7380aa2ff89d0240caee7182c51aac 1226 TIGRFAM TIGR02082 metH: methionine synthase 13 1194 0.0 T 12-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 M892_15915 ba3284c736bcbe1ffcc35660fd859f90 395 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 285 299 - T 12-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 M892_15915 ba3284c736bcbe1ffcc35660fd859f90 395 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 19 391 31.934 T 12-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 M892_15915 ba3284c736bcbe1ffcc35660fd859f90 395 SUPERFAMILY SSF55347 157 378 3.57E-78 T 12-10-2018 M892_15915 ba3284c736bcbe1ffcc35660fd859f90 395 SMART SM00859 21 145 3.8E-22 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 M892_15915 ba3284c736bcbe1ffcc35660fd859f90 395 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 21 144 8.0E-23 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 M892_15915 ba3284c736bcbe1ffcc35660fd859f90 395 PIRSF PIRSF000148 19 395 6.9E-65 T 12-10-2018 M892_15915 ba3284c736bcbe1ffcc35660fd859f90 395 SUPERFAMILY SSF51735 20 170 3.26E-48 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_15915 ba3284c736bcbe1ffcc35660fd859f90 395 Gene3D G3DSA:3.30.360.10 158 374 3.1E-143 T 12-10-2018 M892_15915 ba3284c736bcbe1ffcc35660fd859f90 395 Gene3D G3DSA:3.40.50.720 22 380 3.1E-143 T 12-10-2018 M892_15915 ba3284c736bcbe1ffcc35660fd859f90 395 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 20 390 2.2E-187 T 12-10-2018 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 M892_15915 ba3284c736bcbe1ffcc35660fd859f90 395 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 167 377 1.5E-57 T 12-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 M892_05250 eabcc8f134f046038ba25a365f2f3ddb 405 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 95 103 - T 12-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 M892_05250 eabcc8f134f046038ba25a365f2f3ddb 405 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 1 403 48.061 T 12-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 M892_05250 eabcc8f134f046038ba25a365f2f3ddb 405 SUPERFAMILY SSF51161 292 403 7.54E-15 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily M892_05250 eabcc8f134f046038ba25a365f2f3ddb 405 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 193 203 - T 12-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 M892_05250 eabcc8f134f046038ba25a365f2f3ddb 405 Pfam PF00483 Nucleotidyl transferase 6 273 6.3E-63 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 M892_05250 eabcc8f134f046038ba25a365f2f3ddb 405 Gene3D G3DSA:3.90.550.10 2 286 1.5E-83 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M892_05250 eabcc8f134f046038ba25a365f2f3ddb 405 Gene3D G3DSA:2.160.10.10 287 403 1.7E-32 T 12-10-2018 M892_05250 eabcc8f134f046038ba25a365f2f3ddb 405 SUPERFAMILY SSF53448 4 358 1.31E-69 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M892_05250 eabcc8f134f046038ba25a365f2f3ddb 405 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 4 377 8.4E-153 T 12-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 M892_05250 eabcc8f134f046038ba25a365f2f3ddb 405 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 10 29 - T 12-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 M892_09035 409f177b8d2c5f86e1d82f246e482467 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 257 4.7E-64 T 12-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 M892_09035 409f177b8d2c5f86e1d82f246e482467 302 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 4 302 58.05 T 12-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 M892_09035 409f177b8d2c5f86e1d82f246e482467 302 PIRSF PIRSF002936 1 302 7.7E-156 T 12-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 M892_09035 409f177b8d2c5f86e1d82f246e482467 302 SUPERFAMILY SSF52402 6 209 2.33E-74 T 12-10-2018 M892_09035 409f177b8d2c5f86e1d82f246e482467 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 302 1.9E-163 T 12-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 M892_09035 409f177b8d2c5f86e1d82f246e482467 302 Gene3D G3DSA:3.40.50.620 7 212 6.9E-66 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M892_14000 4330b0878d3c44acc5bf59fd0a2a3211 445 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 248 284 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 M892_14000 4330b0878d3c44acc5bf59fd0a2a3211 445 Pfam PF00202 Aminotransferase class-III 47 410 4.3E-76 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 M892_14000 4330b0878d3c44acc5bf59fd0a2a3211 445 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 17 438 7.0E-194 T 12-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 M892_14000 4330b0878d3c44acc5bf59fd0a2a3211 445 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 17 440 104.793 T 12-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 M892_14000 4330b0878d3c44acc5bf59fd0a2a3211 445 SUPERFAMILY SSF53383 14 437 7.65E-134 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M892_14000 4330b0878d3c44acc5bf59fd0a2a3211 445 Gene3D G3DSA:3.40.640.10 83 331 3.0E-178 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M892_14000 4330b0878d3c44acc5bf59fd0a2a3211 445 Gene3D G3DSA:3.90.1150.10 21 433 3.0E-178 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M892_10995 059823116df0cc1c0893f3e9b0e14fbe 304 Pfam PF00892 EamA-like transporter family 155 287 3.1E-6 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M892_10995 059823116df0cc1c0893f3e9b0e14fbe 304 Pfam PF00892 EamA-like transporter family 12 145 2.8E-15 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M892_10995 059823116df0cc1c0893f3e9b0e14fbe 304 SUPERFAMILY SSF103481 49 146 1.2E-13 T 12-10-2018 M892_10995 059823116df0cc1c0893f3e9b0e14fbe 304 TIGRFAM TIGR00688 rarD: protein RarD 11 264 4.7E-86 T 12-10-2018 IPR004626 RarD protein GO:0005887 M892_10995 059823116df0cc1c0893f3e9b0e14fbe 304 SUPERFAMILY SSF103481 191 291 1.31E-9 T 12-10-2018 M892_23860 7a3e17f559bd9cc21e3cae7d5126122b 215 Gene3D G3DSA:1.20.1050.10 84 191 4.1E-54 T 12-10-2018 M892_23860 7a3e17f559bd9cc21e3cae7d5126122b 215 SUPERFAMILY SSF47616 83 201 9.45E-15 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily M892_23860 7a3e17f559bd9cc21e3cae7d5126122b 215 Pfam PF13417 Glutathione S-transferase, N-terminal domain 9 77 9.8E-9 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 M892_23860 7a3e17f559bd9cc21e3cae7d5126122b 215 SUPERFAMILY SSF52833 5 84 5.18E-15 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M892_23860 7a3e17f559bd9cc21e3cae7d5126122b 215 Gene3D G3DSA:3.40.30.10 6 195 4.1E-54 T 12-10-2018 M892_09075 0bb74cabf6be9d58fb2a1a69d114d818 250 Gene3D G3DSA:3.10.450.350 155 244 3.5E-14 T 12-10-2018 M892_09075 0bb74cabf6be9d58fb2a1a69d114d818 250 Pfam PF08525 Opacity-associated protein A N-terminal motif 97 123 1.1E-9 T 12-10-2018 IPR013731 Opacity-associated protein A, N-terminal M892_09075 0bb74cabf6be9d58fb2a1a69d114d818 250 Pfam PF04225 Opacity-associated protein A LysM-like domain 166 250 1.7E-38 T 12-10-2018 IPR007340 Opacity-associated protein A M892_12130 050e5b404c168e545b48637743b78771 681 SMART SM01340 212 330 6.4E-60 T 12-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 M892_12130 050e5b404c168e545b48637743b78771 681 Gene3D G3DSA:3.30.565.10 1 216 5.6E-70 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_12130 050e5b404c168e545b48637743b78771 681 Gene3D G3DSA:3.30.230.10 217 329 3.1E-40 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M892_12130 050e5b404c168e545b48637743b78771 681 SMART SM00853 498 641 1.3E-15 T 12-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 M892_12130 050e5b404c168e545b48637743b78771 681 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 679 25.183 T 12-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 M892_12130 050e5b404c168e545b48637743b78771 681 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 212 329 3.0E-40 T 12-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 M892_12130 050e5b404c168e545b48637743b78771 681 SUPERFAMILY SSF54211 191 330 2.05E-38 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold M892_12130 050e5b404c168e545b48637743b78771 681 SUPERFAMILY SSF55874 1 207 2.49E-52 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_12130 050e5b404c168e545b48637743b78771 681 SUPERFAMILY SSF118116 496 678 1.31E-36 T 12-10-2018 IPR037198 MutL, C-terminal domain superfamily M892_12130 050e5b404c168e545b48637743b78771 681 Gene3D G3DSA:3.30.1370.100 539 633 2.0E-53 T 12-10-2018 M892_12130 050e5b404c168e545b48637743b78771 681 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 119 8.4E-11 T 12-10-2018 M892_12130 050e5b404c168e545b48637743b78771 681 Pfam PF08676 MutL C terminal dimerisation domain 496 635 1.7E-27 T 12-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 M892_12130 050e5b404c168e545b48637743b78771 681 Gene3D G3DSA:2.30.42.20 496 677 2.0E-53 T 12-10-2018 M892_12130 050e5b404c168e545b48637743b78771 681 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 310 1.2E-102 T 12-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 M892_12130 050e5b404c168e545b48637743b78771 681 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 12-10-2018 IPR014762 DNA mismatch repair, conserved site M892_12015 04ed49a6897ae9003033416c0e7a3d40 626 SMART SM00304 295 349 3.4E-10 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M892_12015 04ed49a6897ae9003033416c0e7a3d40 626 SMART SM00283 364 625 2.3E-67 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M892_12015 04ed49a6897ae9003033416c0e7a3d40 626 SUPERFAMILY SSF103190 52 174 1.49E-9 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily M892_12015 04ed49a6897ae9003033416c0e7a3d40 626 Pfam PF02743 Cache domain 39 258 2.0E-27 T 12-10-2018 IPR033479 Double Cache domain 1 M892_12015 04ed49a6897ae9003033416c0e7a3d40 626 Gene3D G3DSA:3.30.450.20 64 167 2.0E-52 T 12-10-2018 M892_12015 04ed49a6897ae9003033416c0e7a3d40 626 SUPERFAMILY SSF58104 317 626 4.84E-74 T 12-10-2018 M892_12015 04ed49a6897ae9003033416c0e7a3d40 626 Gene3D G3DSA:3.30.450.20 51 269 2.0E-52 T 12-10-2018 M892_12015 04ed49a6897ae9003033416c0e7a3d40 626 Gene3D G3DSA:1.10.287.950 294 626 3.3E-70 T 12-10-2018 M892_12015 04ed49a6897ae9003033416c0e7a3d40 626 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 436 590 1.7E-40 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M892_12015 04ed49a6897ae9003033416c0e7a3d40 626 Pfam PF00672 HAMP domain 296 345 4.7E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M892_09865 41109d417f99ed329cd30109358da4a5 144 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 144 32.614 T 12-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 M892_09865 41109d417f99ed329cd30109358da4a5 144 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 142 4.2E-51 T 12-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 M892_09865 41109d417f99ed329cd30109358da4a5 144 Gene3D G3DSA:3.50.80.10 1 144 9.0E-54 T 12-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily M892_09865 41109d417f99ed329cd30109358da4a5 144 SUPERFAMILY SSF69500 2 143 1.7E-53 T 12-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily M892_09865 41109d417f99ed329cd30109358da4a5 144 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 2 144 1.6E-63 T 12-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 M892_09960 e3d0db11983e0027b6d89695d163a527 930 SMART SM00482 687 894 9.9E-116 T 12-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M892_09960 e3d0db11983e0027b6d89695d163a527 930 Gene3D G3DSA:1.20.1060.10 544 659 4.0E-43 T 12-10-2018 M892_09960 e3d0db11983e0027b6d89695d163a527 930 SUPERFAMILY SSF53098 334 519 1.26E-54 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_09960 e3d0db11983e0027b6d89695d163a527 930 Gene3D G3DSA:3.40.50.1010 9 284 1.4E-94 T 12-10-2018 M892_09960 e3d0db11983e0027b6d89695d163a527 930 Gene3D G3DSA:3.30.420.10 328 543 2.0E-69 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M892_09960 e3d0db11983e0027b6d89695d163a527 930 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 170 1.9E-54 T 12-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 M892_09960 e3d0db11983e0027b6d89695d163a527 930 SMART SM00474 331 518 4.3E-41 T 12-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 M892_09960 e3d0db11983e0027b6d89695d163a527 930 Pfam PF00476 DNA polymerase family A 552 927 8.6E-157 T 12-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M892_09960 e3d0db11983e0027b6d89695d163a527 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 814 825 1.0E-77 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M892_09960 e3d0db11983e0027b6d89695d163a527 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 846 862 1.0E-77 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M892_09960 e3d0db11983e0027b6d89695d163a527 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 656 678 1.0E-77 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M892_09960 e3d0db11983e0027b6d89695d163a527 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 731 744 1.0E-77 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M892_09960 e3d0db11983e0027b6d89695d163a527 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 701 724 1.0E-77 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M892_09960 e3d0db11983e0027b6d89695d163a527 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 755 780 1.0E-77 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M892_09960 e3d0db11983e0027b6d89695d163a527 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 679 694 1.0E-77 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M892_09960 e3d0db11983e0027b6d89695d163a527 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 792 803 1.0E-77 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M892_09960 e3d0db11983e0027b6d89695d163a527 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 877 890 1.0E-77 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M892_09960 e3d0db11983e0027b6d89695d163a527 930 Pfam PF01612 3'-5' exonuclease 331 515 3.9E-38 T 12-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 M892_09960 e3d0db11983e0027b6d89695d163a527 930 SUPERFAMILY SSF56672 523 930 4.34E-160 T 12-10-2018 M892_09960 e3d0db11983e0027b6d89695d163a527 930 Gene3D G3DSA:1.10.150.20 174 253 1.4E-94 T 12-10-2018 M892_09960 e3d0db11983e0027b6d89695d163a527 930 TIGRFAM TIGR00593 pola: DNA polymerase I 9 930 1.5E-284 T 12-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M892_09960 e3d0db11983e0027b6d89695d163a527 930 SUPERFAMILY SSF47807 171 291 1.15E-29 T 12-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily M892_09960 e3d0db11983e0027b6d89695d163a527 930 SUPERFAMILY SSF88723 7 170 1.18E-58 T 12-10-2018 IPR029060 PIN-like domain superfamily M892_09960 e3d0db11983e0027b6d89695d163a527 930 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 171 268 2.5E-28 T 12-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 M892_09960 e3d0db11983e0027b6d89695d163a527 930 SMART SM00279 173 208 1.2E-13 T 12-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 M892_09960 e3d0db11983e0027b6d89695d163a527 930 ProSitePatterns PS00447 DNA polymerase family A signature. 755 774 - T 12-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M892_09960 e3d0db11983e0027b6d89695d163a527 930 Gene3D G3DSA:1.10.150.20 710 853 1.2E-113 T 12-10-2018 M892_09960 e3d0db11983e0027b6d89695d163a527 930 SMART SM00475 7 267 1.3E-122 T 12-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 M892_09960 e3d0db11983e0027b6d89695d163a527 930 Gene3D G3DSA:3.30.70.370 665 926 1.2E-113 T 12-10-2018 M892_27075 1acc5673bdf3b35bce59e6b8e509dcd9 239 SUPERFAMILY SSF49584 151 228 1.96E-15 T 12-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily M892_27075 1acc5673bdf3b35bce59e6b8e509dcd9 239 Gene3D G3DSA:2.60.40.10 142 232 2.4E-17 T 12-10-2018 IPR013783 Immunoglobulin-like fold M892_27075 1acc5673bdf3b35bce59e6b8e509dcd9 239 PRINTS PR00969 Pili chaperone signature 55 76 3.6E-28 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 M892_27075 1acc5673bdf3b35bce59e6b8e509dcd9 239 PRINTS PR00969 Pili chaperone signature 10 19 3.6E-28 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 M892_27075 1acc5673bdf3b35bce59e6b8e509dcd9 239 PRINTS PR00969 Pili chaperone signature 118 133 3.6E-28 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 M892_27075 1acc5673bdf3b35bce59e6b8e509dcd9 239 PRINTS PR00969 Pili chaperone signature 157 172 3.6E-28 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 M892_27075 1acc5673bdf3b35bce59e6b8e509dcd9 239 PRINTS PR00969 Pili chaperone signature 85 102 3.6E-28 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 M892_27075 1acc5673bdf3b35bce59e6b8e509dcd9 239 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 10 136 4.5E-31 T 12-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 M892_27075 1acc5673bdf3b35bce59e6b8e509dcd9 239 SUPERFAMILY SSF49354 4 136 1.02E-32 T 12-10-2018 IPR008962 PapD-like superfamily M892_27075 1acc5673bdf3b35bce59e6b8e509dcd9 239 Gene3D G3DSA:2.60.40.10 10 134 1.5E-33 T 12-10-2018 IPR013783 Immunoglobulin-like fold M892_27075 1acc5673bdf3b35bce59e6b8e509dcd9 239 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 163 219 7.8E-12 T 12-10-2018 IPR016148 Pili assembly chaperone, C-terminal M892_03725 0d32849ff459ad65e2f3e13d616bec32 463 SMART SM00345 7 66 4.3E-14 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M892_03725 0d32849ff459ad65e2f3e13d616bec32 463 Gene3D G3DSA:3.40.640.10 138 357 7.4E-105 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M892_03725 0d32849ff459ad65e2f3e13d616bec32 463 Gene3D G3DSA:1.10.10.10 1 68 8.3E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_03725 0d32849ff459ad65e2f3e13d616bec32 463 Gene3D G3DSA:3.90.1150.10 95 462 7.4E-105 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M892_03725 0d32849ff459ad65e2f3e13d616bec32 463 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 5.1E-12 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M892_03725 0d32849ff459ad65e2f3e13d616bec32 463 Pfam PF00155 Aminotransferase class I and II 143 458 1.9E-39 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 M892_03725 0d32849ff459ad65e2f3e13d616bec32 463 SUPERFAMILY SSF46785 1 68 2.08E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_03725 0d32849ff459ad65e2f3e13d616bec32 463 SUPERFAMILY SSF53383 88 462 6.45E-99 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M892_26870 00842a6cf274ef5a270d006c7dd7a142 902 SUPERFAMILY SSF52540 14 228 2.62E-11 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_26870 00842a6cf274ef5a270d006c7dd7a142 902 SUPERFAMILY SSF46894 831 894 9.52E-17 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M892_26870 00842a6cf274ef5a270d006c7dd7a142 902 Hamap MF_01247 HTH-type transcriptional regulator MalT [malT]. 1 902 38.759 T 12-10-2018 IPR023768 Transcriptional regulator HTH-type, MalT M892_26870 00842a6cf274ef5a270d006c7dd7a142 902 Pfam PF00196 Bacterial regulatory proteins, luxR family 838 893 1.3E-19 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_26870 00842a6cf274ef5a270d006c7dd7a142 902 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 869 881 1.3E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_26870 00842a6cf274ef5a270d006c7dd7a142 902 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 853 869 1.3E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_26870 00842a6cf274ef5a270d006c7dd7a142 902 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 839 853 1.3E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_26870 00842a6cf274ef5a270d006c7dd7a142 902 Gene3D G3DSA:1.25.40.10 443 811 8.5E-84 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_26870 00842a6cf274ef5a270d006c7dd7a142 902 Gene3D G3DSA:1.10.10.10 829 900 8.3E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_26870 00842a6cf274ef5a270d006c7dd7a142 902 SUPERFAMILY SSF48452 442 805 1.77E-156 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_26870 00842a6cf274ef5a270d006c7dd7a142 902 SMART SM00421 836 893 5.8E-20 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_26870 00842a6cf274ef5a270d006c7dd7a142 902 Gene3D G3DSA:3.40.50.300 12 165 1.6E-6 T 12-10-2018 M892_26870 00842a6cf274ef5a270d006c7dd7a142 902 ProSitePatterns PS00622 LuxR-type HTH domain signature. 853 880 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_26870 00842a6cf274ef5a270d006c7dd7a142 902 Pfam PF13181 Tetratricopeptide repeat 696 714 0.18 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_01485 17f85bb8822753cc663867d0d1441d8c 268 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 262 2.2E-66 T 12-10-2018 M892_01485 17f85bb8822753cc663867d0d1441d8c 268 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 235 2.0E-28 T 12-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 M892_01485 17f85bb8822753cc663867d0d1441d8c 268 Gene3D G3DSA:3.40.50.1000 3 263 2.2E-79 T 12-10-2018 IPR023214 HAD superfamily M892_01485 17f85bb8822753cc663867d0d1441d8c 268 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 262 5.6E-62 T 12-10-2018 IPR000150 Cof family GO:0016787 M892_01485 17f85bb8822753cc663867d0d1441d8c 268 SUPERFAMILY SSF56784 1 267 2.84E-76 T 12-10-2018 IPR036412 HAD-like superfamily M892_01485 17f85bb8822753cc663867d0d1441d8c 268 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 12-10-2018 M892_01485 17f85bb8822753cc663867d0d1441d8c 268 ProSitePatterns PS01229 Hypothetical cof family signature 2. 216 238 - T 12-10-2018 M892_01485 17f85bb8822753cc663867d0d1441d8c 268 Gene3D G3DSA:3.30.1240.10 86 191 2.2E-79 T 12-10-2018 M892_25070 297ca5a56b5bf685d59bab93a127fceb 176 TIGRFAM TIGR04110 heme_HutZ: heme utilization protein HutZ 4 171 7.4E-91 T 12-10-2018 IPR014419 Heme utilization protein with pyridoxamine 5'-phosphate domain M892_25070 297ca5a56b5bf685d59bab93a127fceb 176 PIRSF PIRSF004633 1 176 7.7E-78 T 12-10-2018 IPR014419 Heme utilization protein with pyridoxamine 5'-phosphate domain M892_25070 297ca5a56b5bf685d59bab93a127fceb 176 SUPERFAMILY SSF50475 12 162 7.67E-35 T 12-10-2018 M892_25070 297ca5a56b5bf685d59bab93a127fceb 176 Gene3D G3DSA:2.30.110.10 12 176 1.6E-54 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 M892_25070 297ca5a56b5bf685d59bab93a127fceb 176 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 15 105 4.4E-18 T 12-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 M892_27160 1687c0e1c0885380d72c6976feae84a2 244 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_27160 1687c0e1c0885380d72c6976feae84a2 244 Gene3D G3DSA:3.40.50.300 3 243 2.5E-60 T 12-10-2018 M892_27160 1687c0e1c0885380d72c6976feae84a2 244 Pfam PF00005 ABC transporter 25 170 4.2E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_27160 1687c0e1c0885380d72c6976feae84a2 244 SUPERFAMILY SSF52540 5 227 9.87E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_27160 1687c0e1c0885380d72c6976feae84a2 244 SMART SM00382 34 231 1.4E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_09820 ad8f4dc88cdb0dfbe2cd2b5452fe3b98 406 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 403 1.5E-154 T 12-10-2018 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 M892_09820 ad8f4dc88cdb0dfbe2cd2b5452fe3b98 406 Gene3D G3DSA:1.20.81.30 56 173 1.6E-37 T 12-10-2018 M892_09820 ad8f4dc88cdb0dfbe2cd2b5452fe3b98 406 Gene3D G3DSA:1.20.81.30 258 369 2.1E-25 T 12-10-2018 M892_09820 ad8f4dc88cdb0dfbe2cd2b5452fe3b98 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 4.1E-37 T 12-10-2018 IPR003004 GspF/PilC family M892_09820 ad8f4dc88cdb0dfbe2cd2b5452fe3b98 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 166 194 4.1E-37 T 12-10-2018 IPR003004 GspF/PilC family M892_09820 ad8f4dc88cdb0dfbe2cd2b5452fe3b98 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 385 404 4.1E-37 T 12-10-2018 IPR003004 GspF/PilC family M892_09820 ad8f4dc88cdb0dfbe2cd2b5452fe3b98 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 369 383 4.1E-37 T 12-10-2018 IPR003004 GspF/PilC family M892_09820 ad8f4dc88cdb0dfbe2cd2b5452fe3b98 406 Pfam PF00482 Type II secretion system (T2SS), protein F 274 396 1.1E-24 T 12-10-2018 IPR018076 Type II secretion system F domain M892_09820 ad8f4dc88cdb0dfbe2cd2b5452fe3b98 406 Pfam PF00482 Type II secretion system (T2SS), protein F 72 194 3.7E-34 T 12-10-2018 IPR018076 Type II secretion system F domain M892_09820 ad8f4dc88cdb0dfbe2cd2b5452fe3b98 406 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 166 194 - T 12-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 M892_11360 c21b0287b4aa0e14c1377893cba2e21e 476 SUPERFAMILY SSF51905 15 329 1.57E-57 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_11360 c21b0287b4aa0e14c1377893cba2e21e 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 272 288 1.4E-28 T 12-10-2018 M892_11360 c21b0287b4aa0e14c1377893cba2e21e 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 19 38 1.4E-28 T 12-10-2018 M892_11360 c21b0287b4aa0e14c1377893cba2e21e 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 301 323 1.4E-28 T 12-10-2018 M892_11360 c21b0287b4aa0e14c1377893cba2e21e 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 188 206 1.4E-28 T 12-10-2018 M892_11360 c21b0287b4aa0e14c1377893cba2e21e 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 149 167 1.4E-28 T 12-10-2018 M892_11360 c21b0287b4aa0e14c1377893cba2e21e 476 Hamap MF_00247 Soluble pyridine nucleotide transhydrogenase [sthA]. 12 476 65.199 T 12-10-2018 IPR022962 Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0055114 KEGG: 00760+1.6.1.1|MetaCyc: PWY-5083 M892_11360 c21b0287b4aa0e14c1377893cba2e21e 476 PIRSF PIRSF000350 2 473 5.2E-70 T 12-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 M892_11360 c21b0287b4aa0e14c1377893cba2e21e 476 SUPERFAMILY SSF55424 354 473 1.89E-30 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 M892_11360 c21b0287b4aa0e14c1377893cba2e21e 476 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 356 467 9.9E-30 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 M892_11360 c21b0287b4aa0e14c1377893cba2e21e 476 Gene3D G3DSA:3.30.390.30 355 474 1.9E-32 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 M892_11360 c21b0287b4aa0e14c1377893cba2e21e 476 Gene3D G3DSA:3.50.50.60 168 286 2.0E-92 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_11360 c21b0287b4aa0e14c1377893cba2e21e 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 51 66 6.6E-52 T 12-10-2018 M892_11360 c21b0287b4aa0e14c1377893cba2e21e 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 273 287 6.6E-52 T 12-10-2018 M892_11360 c21b0287b4aa0e14c1377893cba2e21e 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 18 40 6.6E-52 T 12-10-2018 M892_11360 c21b0287b4aa0e14c1377893cba2e21e 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 188 213 6.6E-52 T 12-10-2018 M892_11360 c21b0287b4aa0e14c1377893cba2e21e 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 316 323 6.6E-52 T 12-10-2018 M892_11360 c21b0287b4aa0e14c1377893cba2e21e 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 442 462 6.6E-52 T 12-10-2018 M892_11360 c21b0287b4aa0e14c1377893cba2e21e 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 417 432 6.6E-52 T 12-10-2018 M892_11360 c21b0287b4aa0e14c1377893cba2e21e 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 352 373 6.6E-52 T 12-10-2018 M892_11360 c21b0287b4aa0e14c1377893cba2e21e 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 152 161 6.6E-52 T 12-10-2018 M892_11360 c21b0287b4aa0e14c1377893cba2e21e 476 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 17 336 1.2E-58 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 M892_11360 c21b0287b4aa0e14c1377893cba2e21e 476 Gene3D G3DSA:3.50.50.60 17 343 2.0E-92 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_13780 f890fcd4521b89d104eec8a215d529d4 476 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 8 460 1.5E-150 T 12-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 M892_13780 f890fcd4521b89d104eec8a215d529d4 476 PIRSF PIRSF000350 1 468 4.2E-84 T 12-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 M892_13780 f890fcd4521b89d104eec8a215d529d4 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 7.5E-68 T 12-10-2018 M892_13780 f890fcd4521b89d104eec8a215d529d4 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 7.5E-68 T 12-10-2018 M892_13780 f890fcd4521b89d104eec8a215d529d4 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 7.5E-68 T 12-10-2018 M892_13780 f890fcd4521b89d104eec8a215d529d4 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 7.5E-68 T 12-10-2018 M892_13780 f890fcd4521b89d104eec8a215d529d4 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 7.5E-68 T 12-10-2018 M892_13780 f890fcd4521b89d104eec8a215d529d4 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 7.5E-68 T 12-10-2018 M892_13780 f890fcd4521b89d104eec8a215d529d4 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 7.5E-68 T 12-10-2018 M892_13780 f890fcd4521b89d104eec8a215d529d4 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 7.5E-68 T 12-10-2018 M892_13780 f890fcd4521b89d104eec8a215d529d4 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 7.5E-68 T 12-10-2018 M892_13780 f890fcd4521b89d104eec8a215d529d4 476 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 42 52 - T 12-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 M892_13780 f890fcd4521b89d104eec8a215d529d4 476 SUPERFAMILY SSF51905 6 369 3.0E-57 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_13780 f890fcd4521b89d104eec8a215d529d4 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 7.6E-40 T 12-10-2018 M892_13780 f890fcd4521b89d104eec8a215d529d4 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 7.6E-40 T 12-10-2018 M892_13780 f890fcd4521b89d104eec8a215d529d4 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 7.6E-40 T 12-10-2018 M892_13780 f890fcd4521b89d104eec8a215d529d4 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 7.6E-40 T 12-10-2018 M892_13780 f890fcd4521b89d104eec8a215d529d4 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 7.6E-40 T 12-10-2018 M892_13780 f890fcd4521b89d104eec8a215d529d4 476 SUPERFAMILY SSF55424 346 466 8.93E-39 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 M892_13780 f890fcd4521b89d104eec8a215d529d4 476 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 455 2.7E-35 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 M892_13780 f890fcd4521b89d104eec8a215d529d4 476 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 328 5.0E-63 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 M892_13780 f890fcd4521b89d104eec8a215d529d4 476 Gene3D G3DSA:3.30.390.30 346 467 1.1E-44 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 M892_13780 f890fcd4521b89d104eec8a215d529d4 476 Gene3D G3DSA:3.50.50.60 9 332 5.8E-123 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_13780 f890fcd4521b89d104eec8a215d529d4 476 Gene3D G3DSA:3.50.50.60 150 271 5.8E-123 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_26320 2e649e4542ecd5f967c796d9c735508d 118 Pfam PF02049 Flagellar hook-basal body complex protein FliE 40 118 4.2E-23 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 M892_26320 2e649e4542ecd5f967c796d9c735508d 118 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 10 117 1.6E-14 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 M892_26320 2e649e4542ecd5f967c796d9c735508d 118 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 17 118 14.834 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 M892_26320 2e649e4542ecd5f967c796d9c735508d 118 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 48 64 4.8E-10 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 M892_26320 2e649e4542ecd5f967c796d9c735508d 118 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 82 98 4.8E-10 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 M892_26320 2e649e4542ecd5f967c796d9c735508d 118 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 103 116 4.8E-10 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 M892_02340 6e0472dae8c1a4aef6e9d8febd2d0f2c 160 Pfam PF01047 MarR family 50 110 1.4E-15 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M892_02340 6e0472dae8c1a4aef6e9d8febd2d0f2c 160 ProSitePatterns PS01117 MarR-type HTH domain signature. 84 118 - T 12-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site M892_02340 6e0472dae8c1a4aef6e9d8febd2d0f2c 160 SUPERFAMILY SSF46785 10 156 2.48E-35 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_02340 6e0472dae8c1a4aef6e9d8febd2d0f2c 160 SMART SM00347 42 145 1.6E-31 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M892_02340 6e0472dae8c1a4aef6e9d8febd2d0f2c 160 Gene3D G3DSA:1.10.10.10 1 159 7.2E-38 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_02340 6e0472dae8c1a4aef6e9d8febd2d0f2c 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 85 1.8E-15 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M892_02340 6e0472dae8c1a4aef6e9d8febd2d0f2c 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 101 1.8E-15 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M892_02340 6e0472dae8c1a4aef6e9d8febd2d0f2c 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 135 155 1.8E-15 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M892_02340 6e0472dae8c1a4aef6e9d8febd2d0f2c 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 105 121 1.8E-15 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M892_01220 30bac52eaffc4728e99f48f92ed925d8 514 Pfam PF13005 zinc-finger binding domain of transposase IS66 120 164 1.6E-16 T 12-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 M892_01220 30bac52eaffc4728e99f48f92ed925d8 514 Pfam PF13817 IS66 C-terminal element 474 510 7.6E-8 T 12-10-2018 IPR039552 Transposase IS66, C-terminal M892_01220 30bac52eaffc4728e99f48f92ed925d8 514 Pfam PF13007 Transposase C of IS166 homeodomain 42 112 2.2E-14 T 12-10-2018 IPR024463 Transposase TnpC, homeodomain M892_01220 30bac52eaffc4728e99f48f92ed925d8 514 Pfam PF03050 Transposase IS66 family 184 467 1.4E-100 T 12-10-2018 IPR004291 Transposase, IS66 M892_08610 687605767d584d50362c0fcfa9a364e5 203 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 193 19.003 T 12-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 M892_08610 687605767d584d50362c0fcfa9a364e5 203 Pfam PF02660 Glycerol-3-phosphate acyltransferase 12 184 4.8E-50 T 12-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 M892_08610 687605767d584d50362c0fcfa9a364e5 203 SMART SM01207 10 185 5.9E-84 T 12-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 M892_08610 687605767d584d50362c0fcfa9a364e5 203 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 2 194 6.0E-74 T 12-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 M892_19290 a26be9b6e9fd452dfa44baa69d7a4f81 480 SUPERFAMILY SSF103190 99 183 4.71E-12 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily M892_19290 a26be9b6e9fd452dfa44baa69d7a4f81 480 SUPERFAMILY SSF47384 258 326 1.14E-14 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M892_19290 a26be9b6e9fd452dfa44baa69d7a4f81 480 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 373 478 4.7E-13 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_19290 a26be9b6e9fd452dfa44baa69d7a4f81 480 Gene3D G3DSA:3.30.450.20 69 173 7.4E-7 T 12-10-2018 M892_19290 a26be9b6e9fd452dfa44baa69d7a4f81 480 SMART SM00387 372 479 2.5E-18 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_19290 a26be9b6e9fd452dfa44baa69d7a4f81 480 SUPERFAMILY SSF55874 316 478 1.7E-30 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_19290 a26be9b6e9fd452dfa44baa69d7a4f81 480 Pfam PF00512 His Kinase A (phospho-acceptor) domain 265 326 8.9E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M892_19290 a26be9b6e9fd452dfa44baa69d7a4f81 480 SMART SM00388 262 327 2.7E-17 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M892_19290 a26be9b6e9fd452dfa44baa69d7a4f81 480 Gene3D G3DSA:1.10.287.130 256 324 1.5E-14 T 12-10-2018 M892_19290 a26be9b6e9fd452dfa44baa69d7a4f81 480 Gene3D G3DSA:3.30.565.10 325 479 1.9E-28 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_17185 b375df4c6845a448f5ca0d561b9c5bf0 300 Pfam PF13084 Domain of unknown function (DUF3943) 137 246 6.0E-37 T 12-10-2018 IPR025079 Domain of unknown function DUF3943 M892_08505 3ad9295d352f06b8b8b85a74403fbc08 762 SUPERFAMILY SSF56719 33 485 4.19E-156 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 M892_08505 3ad9295d352f06b8b8b85a74403fbc08 762 SUPERFAMILY SSF101904 499 743 1.96E-52 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal M892_08505 3ad9295d352f06b8b8b85a74403fbc08 762 Gene3D G3DSA:1.10.268.10 371 456 3.7E-180 T 12-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 M892_08505 3ad9295d352f06b8b8b85a74403fbc08 762 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 600 636 0.051 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 M892_08505 3ad9295d352f06b8b8b85a74403fbc08 762 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 647 693 1.4E-7 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 M892_08505 3ad9295d352f06b8b8b85a74403fbc08 762 SMART SM00434 13 463 1.2E-233 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 M892_08505 3ad9295d352f06b8b8b85a74403fbc08 762 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 10 744 0.0 T 12-10-2018 M892_08505 3ad9295d352f06b8b8b85a74403fbc08 762 Gene3D G3DSA:3.30.1360.40 240 333 3.7E-180 T 12-10-2018 M892_08505 3ad9295d352f06b8b8b85a74403fbc08 762 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 34 470 8.2E-136 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 M892_08505 3ad9295d352f06b8b8b85a74403fbc08 762 Gene3D G3DSA:2.120.10.90 502 740 1.1E-15 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal M892_08505 3ad9295d352f06b8b8b85a74403fbc08 762 Gene3D G3DSA:3.90.199.10 34 483 3.7E-180 T 12-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 M892_08505 3ad9295d352f06b8b8b85a74403fbc08 762 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 6 745 33.88 T 12-10-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 M892_18525 ef176ce34e343255aba7e40b0a8b712d 515 Gene3D G3DSA:3.40.50.150 191 473 2.0E-86 T 12-10-2018 M892_18525 ef176ce34e343255aba7e40b0a8b712d 515 SUPERFAMILY SSF53335 20 514 5.63E-139 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M892_18525 ef176ce34e343255aba7e40b0a8b712d 515 Pfam PF12161 HsdM N-terminal domain 22 155 8.3E-22 T 12-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain M892_18525 ef176ce34e343255aba7e40b0a8b712d 515 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 19 489 3.0E-87 T 12-10-2018 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 M892_18525 ef176ce34e343255aba7e40b0a8b712d 515 Pfam PF02384 N-6 DNA Methylase 170 478 4.6E-109 T 12-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 M892_18525 ef176ce34e343255aba7e40b0a8b712d 515 Gene3D G3DSA:1.20.1260.30 13 186 3.2E-34 T 12-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily M892_18525 ef176ce34e343255aba7e40b0a8b712d 515 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 295 307 1.4E-12 T 12-10-2018 M892_18525 ef176ce34e343255aba7e40b0a8b712d 515 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 193 209 1.4E-12 T 12-10-2018 M892_18525 ef176ce34e343255aba7e40b0a8b712d 515 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 217 231 1.4E-12 T 12-10-2018 M892_25155 b04feb4b9f77fdfe1a390ea33a229339 276 Pfam PF02540 NAD synthase 21 270 1.5E-62 T 12-10-2018 IPR022310 NAD/GMP synthase M892_25155 b04feb4b9f77fdfe1a390ea33a229339 276 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 16 274 45.858 T 12-10-2018 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 M892_25155 b04feb4b9f77fdfe1a390ea33a229339 276 SUPERFAMILY SSF52402 2 276 1.75E-79 T 12-10-2018 M892_25155 b04feb4b9f77fdfe1a390ea33a229339 276 Gene3D G3DSA:3.40.50.620 1 276 4.1E-82 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M892_25155 b04feb4b9f77fdfe1a390ea33a229339 276 TIGRFAM TIGR00552 nadE: NAD+ synthetase 20 272 3.0E-64 T 12-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 M892_15210 539401dfe135925e6079c1df90427d2f 142 Gene3D G3DSA:3.30.160.170 40 139 6.1E-14 T 12-10-2018 IPR035924 FlaG-like superfamily M892_15210 539401dfe135925e6079c1df90427d2f 142 Pfam PF03646 FlaG protein 43 140 2.0E-25 T 12-10-2018 IPR005186 FlaG protein M892_15210 539401dfe135925e6079c1df90427d2f 142 SUPERFAMILY SSF160214 60 141 3.92E-23 T 12-10-2018 IPR035924 FlaG-like superfamily M892_06395 06281d3c56181dbefe7cb4f2437e50d8 171 ProDom PD016359 TRANSMEMBRANE TOXS REGULATORY MEMBRANE PERIPLASMIC 1 171 1.0E-90 T 12-10-2018 IPR035288 Trans-membrane regulatory protein ToxS GO:0016021 M892_06395 06281d3c56181dbefe7cb4f2437e50d8 171 Pfam PF17323 Trans-membrane regulatory protein ToxS 21 169 2.4E-69 T 12-10-2018 IPR035288 Trans-membrane regulatory protein ToxS GO:0016021 M892_00135 70316c1e81037df4d5d816acb785aa40 215 SMART SM00382 28 214 2.5E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_00135 70316c1e81037df4d5d816acb785aa40 215 Pfam PF00005 ABC transporter 22 163 8.7E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_00135 70316c1e81037df4d5d816acb785aa40 215 SUPERFAMILY SSF52540 10 199 6.04E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_00135 70316c1e81037df4d5d816acb785aa40 215 Gene3D G3DSA:3.40.50.300 1 205 1.9E-52 T 12-10-2018 M892_20260 fab2aa8b5f956f124c59c6fab28c62c5 718 Pfam PF00326 Prolyl oligopeptidase family 499 714 1.2E-70 T 12-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 M892_20260 fab2aa8b5f956f124c59c6fab28c62c5 718 Gene3D G3DSA:3.40.50.1820 51 683 5.8E-257 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_20260 fab2aa8b5f956f124c59c6fab28c62c5 718 SUPERFAMILY SSF50993 37 448 1.31E-100 T 12-10-2018 M892_20260 fab2aa8b5f956f124c59c6fab28c62c5 718 SUPERFAMILY SSF53474 453 697 1.02E-49 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_20260 fab2aa8b5f956f124c59c6fab28c62c5 718 Gene3D G3DSA:2.130.10.120 108 444 5.8E-257 T 12-10-2018 M892_20260 fab2aa8b5f956f124c59c6fab28c62c5 718 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 643 665 5.5E-60 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 M892_20260 fab2aa8b5f956f124c59c6fab28c62c5 718 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 510 534 5.5E-60 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 M892_20260 fab2aa8b5f956f124c59c6fab28c62c5 718 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 624 639 5.5E-60 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 M892_20260 fab2aa8b5f956f124c59c6fab28c62c5 718 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 538 557 5.5E-60 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 M892_20260 fab2aa8b5f956f124c59c6fab28c62c5 718 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 484 502 5.5E-60 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 M892_20260 fab2aa8b5f956f124c59c6fab28c62c5 718 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 568 588 5.5E-60 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 M892_20260 fab2aa8b5f956f124c59c6fab28c62c5 718 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 42 442 7.2E-130 T 12-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 M892_08175 2e074cd2aa1e113159710f8134cb3bbb 183 Gene3D G3DSA:1.20.120.520 1 155 2.8E-15 T 12-10-2018 M892_08175 2e074cd2aa1e113159710f8134cb3bbb 183 Pfam PF01814 Hemerythrin HHE cation binding domain 2 135 4.7E-13 T 12-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 M892_06340 da5ae01d1507ed3e4589cea5c966f61a 524 Pfam PF02378 Phosphotransferase system, EIIC 11 353 2.1E-65 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 M892_06340 da5ae01d1507ed3e4589cea5c966f61a 524 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 452 469 - T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 M892_06340 da5ae01d1507ed3e4589cea5c966f61a 524 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 411 499 6.2E-22 T 12-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 M892_06340 da5ae01d1507ed3e4589cea5c966f61a 524 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 3 510 1.9E-210 T 12-10-2018 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 M892_06340 da5ae01d1507ed3e4589cea5c966f61a 524 SUPERFAMILY SSF55604 439 511 5.23E-20 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 M892_06340 da5ae01d1507ed3e4589cea5c966f61a 524 Pfam PF00367 phosphotransferase system, EIIB 441 474 2.9E-13 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 M892_06340 da5ae01d1507ed3e4589cea5c966f61a 524 Gene3D G3DSA:3.30.1360.60 435 513 8.8E-25 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 M892_08330 d050868f1fabb97dfe00b8cbaca567c1 416 SMART SM01097 35 165 1.0E-91 T 12-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 M892_08330 d050868f1fabb97dfe00b8cbaca567c1 416 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 301 317 2.1E-39 T 12-10-2018 M892_08330 d050868f1fabb97dfe00b8cbaca567c1 416 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 343 354 2.1E-39 T 12-10-2018 M892_08330 d050868f1fabb97dfe00b8cbaca567c1 416 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 318 335 2.1E-39 T 12-10-2018 M892_08330 d050868f1fabb97dfe00b8cbaca567c1 416 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 270 284 2.1E-39 T 12-10-2018 M892_08330 d050868f1fabb97dfe00b8cbaca567c1 416 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 231 245 2.1E-39 T 12-10-2018 M892_08330 d050868f1fabb97dfe00b8cbaca567c1 416 PRINTS PR00096 Glutamine amidotransferase superfamily signature 273 282 4.9E-11 T 12-10-2018 M892_08330 d050868f1fabb97dfe00b8cbaca567c1 416 PRINTS PR00096 Glutamine amidotransferase superfamily signature 301 312 4.9E-11 T 12-10-2018 M892_08330 d050868f1fabb97dfe00b8cbaca567c1 416 PRINTS PR00096 Glutamine amidotransferase superfamily signature 386 399 4.9E-11 T 12-10-2018 M892_08330 d050868f1fabb97dfe00b8cbaca567c1 416 SUPERFAMILY SSF52021 37 171 2.62E-57 T 12-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 M892_08330 d050868f1fabb97dfe00b8cbaca567c1 416 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 37 413 4.5E-149 T 12-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 M892_08330 d050868f1fabb97dfe00b8cbaca567c1 416 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 37 164 6.6E-53 T 12-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 M892_08330 d050868f1fabb97dfe00b8cbaca567c1 416 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 35 415 48.752 T 12-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 M892_08330 d050868f1fabb97dfe00b8cbaca567c1 416 PRINTS PR00097 Anthranilate synthase component II signature 301 312 1.5E-5 T 12-10-2018 M892_08330 d050868f1fabb97dfe00b8cbaca567c1 416 PRINTS PR00097 Anthranilate synthase component II signature 273 282 1.5E-5 T 12-10-2018 M892_08330 d050868f1fabb97dfe00b8cbaca567c1 416 PRINTS PR00097 Anthranilate synthase component II signature 386 399 1.5E-5 T 12-10-2018 M892_08330 d050868f1fabb97dfe00b8cbaca567c1 416 Gene3D G3DSA:3.50.30.20 35 188 9.0E-60 T 12-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 M892_08330 d050868f1fabb97dfe00b8cbaca567c1 416 SUPERFAMILY SSF52317 190 414 4.14E-63 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M892_08330 d050868f1fabb97dfe00b8cbaca567c1 416 Pfam PF00117 Glutamine amidotransferase class-I 234 409 3.9E-47 T 12-10-2018 IPR017926 Glutamine amidotransferase M892_08330 d050868f1fabb97dfe00b8cbaca567c1 416 Gene3D G3DSA:3.40.50.880 189 415 2.3E-76 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M892_18575 bd3f0cdde78f2f6d7f8bb233a4564798 93 SUPERFAMILY SSF46689 49 78 1.61E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_18575 bd3f0cdde78f2f6d7f8bb233a4564798 93 Pfam PF02954 Bacterial regulatory protein, Fis family 51 78 2.2E-7 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M892_18575 bd3f0cdde78f2f6d7f8bb233a4564798 93 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 45 62 3.5E-6 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M892_18575 bd3f0cdde78f2f6d7f8bb233a4564798 93 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 62 82 3.5E-6 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M892_18575 bd3f0cdde78f2f6d7f8bb233a4564798 93 Gene3D G3DSA:1.10.10.60 1 80 7.2E-9 T 12-10-2018 M892_16805 bd3f0cdde78f2f6d7f8bb233a4564798 93 SUPERFAMILY SSF46689 49 78 1.61E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_16805 bd3f0cdde78f2f6d7f8bb233a4564798 93 Pfam PF02954 Bacterial regulatory protein, Fis family 51 78 2.2E-7 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M892_16805 bd3f0cdde78f2f6d7f8bb233a4564798 93 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 45 62 3.5E-6 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M892_16805 bd3f0cdde78f2f6d7f8bb233a4564798 93 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 62 82 3.5E-6 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M892_16805 bd3f0cdde78f2f6d7f8bb233a4564798 93 Gene3D G3DSA:1.10.10.60 1 80 7.2E-9 T 12-10-2018 M892_06645 5b077404a652184db5dd2cab3670e5be 318 Gene3D G3DSA:3.30.1330.60 187 311 1.4E-38 T 12-10-2018 IPR036737 OmpA-like domain superfamily M892_06645 5b077404a652184db5dd2cab3670e5be 318 Pfam PF01389 OmpA-like transmembrane domain 19 171 3.5E-31 T 12-10-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 M892_06645 5b077404a652184db5dd2cab3670e5be 318 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 292 312 5.6E-6 T 12-10-2018 M892_06645 5b077404a652184db5dd2cab3670e5be 318 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 272 291 5.6E-6 T 12-10-2018 M892_06645 5b077404a652184db5dd2cab3670e5be 318 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 254 271 5.6E-6 T 12-10-2018 M892_06645 5b077404a652184db5dd2cab3670e5be 318 SUPERFAMILY SSF56925 18 171 9.16E-29 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel M892_06645 5b077404a652184db5dd2cab3670e5be 318 Pfam PF00691 OmpA family 209 303 2.4E-23 T 12-10-2018 IPR006665 OmpA-like domain M892_06645 5b077404a652184db5dd2cab3670e5be 318 Gene3D G3DSA:2.40.160.20 5 186 1.2E-37 T 12-10-2018 M892_06645 5b077404a652184db5dd2cab3670e5be 318 SUPERFAMILY SSF103088 188 309 2.49E-36 T 12-10-2018 IPR036737 OmpA-like domain superfamily M892_06645 5b077404a652184db5dd2cab3670e5be 318 PRINTS PR01021 OMPA domain signature 209 231 8.3E-15 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M892_06645 5b077404a652184db5dd2cab3670e5be 318 PRINTS PR01021 OMPA domain signature 239 254 8.3E-15 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M892_06645 5b077404a652184db5dd2cab3670e5be 318 PRINTS PR01021 OMPA domain signature 254 270 8.3E-15 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M892_18250 b6ef79c27d970dd95dba79b98604aac7 490 Pfam PF08388 Group II intron, maturase-specific domain 340 416 2.3E-25 T 12-10-2018 IPR013597 Group II intron, maturase-specific M892_18250 b6ef79c27d970dd95dba79b98604aac7 490 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 59 403 1.5E-104 T 12-10-2018 IPR030931 Group II intron reverse transcriptase/maturase M892_18250 b6ef79c27d970dd95dba79b98604aac7 490 SUPERFAMILY SSF56672 77 402 7.63E-47 T 12-10-2018 M892_18250 b6ef79c27d970dd95dba79b98604aac7 490 Pfam PF13655 N-terminal domain of reverse transcriptase 16 96 1.8E-30 T 12-10-2018 IPR025960 Reverse transcriptase, N-terminal domain M892_18250 b6ef79c27d970dd95dba79b98604aac7 490 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 112 321 2.8E-40 T 12-10-2018 IPR000477 Reverse transcriptase domain M892_16075 b6ef79c27d970dd95dba79b98604aac7 490 Pfam PF08388 Group II intron, maturase-specific domain 340 416 2.3E-25 T 12-10-2018 IPR013597 Group II intron, maturase-specific M892_16075 b6ef79c27d970dd95dba79b98604aac7 490 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 59 403 1.5E-104 T 12-10-2018 IPR030931 Group II intron reverse transcriptase/maturase M892_16075 b6ef79c27d970dd95dba79b98604aac7 490 SUPERFAMILY SSF56672 77 402 7.63E-47 T 12-10-2018 M892_16075 b6ef79c27d970dd95dba79b98604aac7 490 Pfam PF13655 N-terminal domain of reverse transcriptase 16 96 1.8E-30 T 12-10-2018 IPR025960 Reverse transcriptase, N-terminal domain M892_16075 b6ef79c27d970dd95dba79b98604aac7 490 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 112 321 2.8E-40 T 12-10-2018 IPR000477 Reverse transcriptase domain M892_21170 b6ef79c27d970dd95dba79b98604aac7 490 Pfam PF08388 Group II intron, maturase-specific domain 340 416 2.3E-25 T 12-10-2018 IPR013597 Group II intron, maturase-specific M892_21170 b6ef79c27d970dd95dba79b98604aac7 490 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 59 403 1.5E-104 T 12-10-2018 IPR030931 Group II intron reverse transcriptase/maturase M892_21170 b6ef79c27d970dd95dba79b98604aac7 490 SUPERFAMILY SSF56672 77 402 7.63E-47 T 12-10-2018 M892_21170 b6ef79c27d970dd95dba79b98604aac7 490 Pfam PF13655 N-terminal domain of reverse transcriptase 16 96 1.8E-30 T 12-10-2018 IPR025960 Reverse transcriptase, N-terminal domain M892_21170 b6ef79c27d970dd95dba79b98604aac7 490 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 112 321 2.8E-40 T 12-10-2018 IPR000477 Reverse transcriptase domain M892_18750 b6ef79c27d970dd95dba79b98604aac7 490 Pfam PF08388 Group II intron, maturase-specific domain 340 416 2.3E-25 T 12-10-2018 IPR013597 Group II intron, maturase-specific M892_18750 b6ef79c27d970dd95dba79b98604aac7 490 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 59 403 1.5E-104 T 12-10-2018 IPR030931 Group II intron reverse transcriptase/maturase M892_18750 b6ef79c27d970dd95dba79b98604aac7 490 SUPERFAMILY SSF56672 77 402 7.63E-47 T 12-10-2018 M892_18750 b6ef79c27d970dd95dba79b98604aac7 490 Pfam PF13655 N-terminal domain of reverse transcriptase 16 96 1.8E-30 T 12-10-2018 IPR025960 Reverse transcriptase, N-terminal domain M892_18750 b6ef79c27d970dd95dba79b98604aac7 490 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 112 321 2.8E-40 T 12-10-2018 IPR000477 Reverse transcriptase domain M892_27535 1c135b09227657f852214dabb0442c3a 211 Gene3D G3DSA:2.30.110.10 13 211 9.2E-75 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 M892_27535 1c135b09227657f852214dabb0442c3a 211 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 34 116 4.9E-21 T 12-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 M892_27535 1c135b09227657f852214dabb0442c3a 211 PIRSF PIRSF000190 1 211 1.6E-80 T 12-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 M892_27535 1c135b09227657f852214dabb0442c3a 211 SUPERFAMILY SSF50475 11 211 7.67E-63 T 12-10-2018 M892_27535 1c135b09227657f852214dabb0442c3a 211 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 1 211 9.8E-88 T 12-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 M892_27535 1c135b09227657f852214dabb0442c3a 211 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 171 211 3.6E-19 T 12-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 M892_27535 1c135b09227657f852214dabb0442c3a 211 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 9 211 37.379 T 12-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 M892_27535 1c135b09227657f852214dabb0442c3a 211 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 181 194 - T 12-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 M892_14290 666b2c7f75913117cbeb5cace9c8f2dd 287 Gene3D G3DSA:1.10.10.10 3 89 2.2E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_14290 666b2c7f75913117cbeb5cace9c8f2dd 287 Gene3D G3DSA:3.40.190.290 94 262 1.7E-7 T 12-10-2018 M892_14290 666b2c7f75913117cbeb5cace9c8f2dd 287 Pfam PF03466 LysR substrate binding domain 97 258 1.5E-9 T 12-10-2018 IPR005119 LysR, substrate-binding M892_14290 666b2c7f75913117cbeb5cace9c8f2dd 287 SUPERFAMILY SSF46785 4 93 2.4E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_14290 666b2c7f75913117cbeb5cace9c8f2dd 287 SUPERFAMILY SSF53850 95 282 2.71E-13 T 12-10-2018 M892_14290 666b2c7f75913117cbeb5cace9c8f2dd 287 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 2.1E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_14290 666b2c7f75913117cbeb5cace9c8f2dd 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 8.5E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_14290 666b2c7f75913117cbeb5cace9c8f2dd 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 8.5E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_14290 666b2c7f75913117cbeb5cace9c8f2dd 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 8.5E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_20410 a342117ec0b2342b3260aa36ea6861cc 347 Pfam PF13384 Homeodomain-like domain 28 67 9.4E-8 T 12-10-2018 M892_20410 a342117ec0b2342b3260aa36ea6861cc 347 SUPERFAMILY SSF53098 223 318 2.28E-7 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_20410 a342117ec0b2342b3260aa36ea6861cc 347 Pfam PF13358 DDE superfamily endonuclease 169 312 6.1E-35 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_20410 a342117ec0b2342b3260aa36ea6861cc 347 Pfam PF13592 Winged helix-turn helix 99 155 4.5E-18 T 12-10-2018 IPR025959 Winged helix-turn helix domain M892_20410 a342117ec0b2342b3260aa36ea6861cc 347 Gene3D G3DSA:3.30.420.470 136 342 1.9E-12 T 12-10-2018 M892_20410 a342117ec0b2342b3260aa36ea6861cc 347 SUPERFAMILY SSF46689 16 131 1.43E-23 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_20555 a342117ec0b2342b3260aa36ea6861cc 347 Pfam PF13384 Homeodomain-like domain 28 67 9.4E-8 T 12-10-2018 M892_20555 a342117ec0b2342b3260aa36ea6861cc 347 SUPERFAMILY SSF53098 223 318 2.28E-7 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_20555 a342117ec0b2342b3260aa36ea6861cc 347 Pfam PF13358 DDE superfamily endonuclease 169 312 6.1E-35 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_20555 a342117ec0b2342b3260aa36ea6861cc 347 Pfam PF13592 Winged helix-turn helix 99 155 4.5E-18 T 12-10-2018 IPR025959 Winged helix-turn helix domain M892_20555 a342117ec0b2342b3260aa36ea6861cc 347 Gene3D G3DSA:3.30.420.470 136 342 1.9E-12 T 12-10-2018 M892_20555 a342117ec0b2342b3260aa36ea6861cc 347 SUPERFAMILY SSF46689 16 131 1.43E-23 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_10975 95734779e043c0a1820741c5fc31b80e 430 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 66 272 3.2E-42 T 12-10-2018 IPR000477 Reverse transcriptase domain M892_10975 95734779e043c0a1820741c5fc31b80e 430 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 61 74 3.0E-6 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M892_10975 95734779e043c0a1820741c5fc31b80e 430 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 187 200 3.0E-6 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M892_10975 95734779e043c0a1820741c5fc31b80e 430 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 129 147 3.0E-6 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M892_10975 95734779e043c0a1820741c5fc31b80e 430 SUPERFAMILY SSF56672 15 360 2.5E-51 T 12-10-2018 M892_10975 95734779e043c0a1820741c5fc31b80e 430 Pfam PF08388 Group II intron, maturase-specific domain 288 356 1.6E-14 T 12-10-2018 IPR013597 Group II intron, maturase-specific M892_10975 95734779e043c0a1820741c5fc31b80e 430 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 8 350 2.2E-118 T 12-10-2018 IPR030931 Group II intron reverse transcriptase/maturase M892_23990 c6d694a37718a4c005abe47f8f19db34 486 SUPERFAMILY SSF53720 5 484 7.2E-148 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 M892_23990 c6d694a37718a4c005abe47f8f19db34 486 Pfam PF00171 Aldehyde dehydrogenase family 24 480 5.4E-149 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 M892_23990 c6d694a37718a4c005abe47f8f19db34 486 Gene3D G3DSA:3.40.309.10 260 452 5.5E-148 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 M892_23990 c6d694a37718a4c005abe47f8f19db34 486 Gene3D G3DSA:3.40.605.10 19 476 5.5E-148 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 M892_25100 da1b60b056c8bb5ef04712f18b00b0ce 289 SUPERFAMILY SSF53807 33 289 3.14E-48 T 12-10-2018 M892_25100 da1b60b056c8bb5ef04712f18b00b0ce 289 Gene3D G3DSA:3.40.50.1980 29 149 4.1E-34 T 12-10-2018 M892_25100 da1b60b056c8bb5ef04712f18b00b0ce 289 Pfam PF01497 Periplasmic binding protein 35 264 1.3E-35 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain M892_25100 da1b60b056c8bb5ef04712f18b00b0ce 289 Gene3D G3DSA:3.40.50.1980 150 289 9.0E-43 T 12-10-2018 M892_07390 0f0a4a3193acd9bd4e24ff5d108ef93a 443 Pfam PF13173 AAA domain 18 148 3.3E-21 T 12-10-2018 M892_07390 0f0a4a3193acd9bd4e24ff5d108ef93a 443 SUPERFAMILY SSF52540 5 197 2.95E-13 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_07390 0f0a4a3193acd9bd4e24ff5d108ef93a 443 Gene3D G3DSA:3.40.50.300 2 111 9.0E-7 T 12-10-2018 M892_07390 0f0a4a3193acd9bd4e24ff5d108ef93a 443 Pfam PF13635 Domain of unknown function (DUF4143) 221 386 4.9E-16 T 12-10-2018 IPR025420 Domain of unknown function DUF4143 M892_03620 0d71384ae9d4a3146c439ad35a9c20b1 514 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 465 513 3.4E-28 T 12-10-2018 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 M892_03620 0d71384ae9d4a3146c439ad35a9c20b1 514 Gene3D G3DSA:1.10.8.60 375 441 3.5E-16 T 12-10-2018 M892_03620 0d71384ae9d4a3146c439ad35a9c20b1 514 SUPERFAMILY SSF52540 205 445 2.3E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_03620 0d71384ae9d4a3146c439ad35a9c20b1 514 Gene3D G3DSA:1.10.10.60 458 513 4.5E-25 T 12-10-2018 M892_03620 0d71384ae9d4a3146c439ad35a9c20b1 514 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 290 305 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 M892_03620 0d71384ae9d4a3146c439ad35a9c20b1 514 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 417 426 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site M892_03620 0d71384ae9d4a3146c439ad35a9c20b1 514 Gene3D G3DSA:3.30.70.260 1 80 4.6E-26 T 12-10-2018 M892_03620 0d71384ae9d4a3146c439ad35a9c20b1 514 SMART SM00091 80 146 1.5E-6 T 12-10-2018 IPR000014 PAS domain M892_03620 0d71384ae9d4a3146c439ad35a9c20b1 514 SMART SM00382 225 368 1.2E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_03620 0d71384ae9d4a3146c439ad35a9c20b1 514 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 229 242 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 M892_03620 0d71384ae9d4a3146c439ad35a9c20b1 514 SUPERFAMILY SSF55785 81 169 5.33E-9 T 12-10-2018 IPR035965 PAS domain superfamily M892_03620 0d71384ae9d4a3146c439ad35a9c20b1 514 Gene3D G3DSA:3.30.450.20 82 187 1.1E-18 T 12-10-2018 M892_03620 0d71384ae9d4a3146c439ad35a9c20b1 514 SUPERFAMILY SSF46689 461 512 8.96E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_03620 0d71384ae9d4a3146c439ad35a9c20b1 514 Gene3D G3DSA:3.40.50.300 196 374 1.0E-57 T 12-10-2018 M892_03620 0d71384ae9d4a3146c439ad35a9c20b1 514 SUPERFAMILY SSF55021 1 68 9.67E-7 T 12-10-2018 M892_03620 0d71384ae9d4a3146c439ad35a9c20b1 514 Pfam PF00158 Sigma-54 interaction domain 207 370 3.5E-57 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 M892_03620 0d71384ae9d4a3146c439ad35a9c20b1 514 Pfam PF00989 PAS fold 83 130 1.3E-5 T 12-10-2018 IPR013767 PAS fold GO:0006355 M892_05540 e4dac2e4213981dda78055af181cc3b8 768 Gene3D G3DSA:3.40.50.1000 444 709 2.4E-82 T 12-10-2018 IPR023214 HAD superfamily M892_05540 e4dac2e4213981dda78055af181cc3b8 768 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 212 759 2.4E-175 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 M892_05540 e4dac2e4213981dda78055af181cc3b8 768 Pfam PF00122 E1-E2 ATPase 263 443 9.4E-52 T 12-10-2018 M892_05540 e4dac2e4213981dda78055af181cc3b8 768 ProSitePatterns PS01047 Heavy-metal-associated domain. 77 106 - T 12-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 M892_05540 e4dac2e4213981dda78055af181cc3b8 768 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 465 471 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 M892_05540 e4dac2e4213981dda78055af181cc3b8 768 Pfam PF00403 Heavy-metal-associated domain 77 133 2.1E-11 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 M892_05540 e4dac2e4213981dda78055af181cc3b8 768 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 235 736 2.6E-83 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 M892_05540 e4dac2e4213981dda78055af181cc3b8 768 SUPERFAMILY SSF81665 215 745 1.09E-20 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 M892_05540 e4dac2e4213981dda78055af181cc3b8 768 PRINTS PR00941 Cadmium-transporting ATPase signature 86 107 6.2E-8 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 M892_05540 e4dac2e4213981dda78055af181cc3b8 768 PRINTS PR00941 Cadmium-transporting ATPase signature 347 361 6.2E-8 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 M892_05540 e4dac2e4213981dda78055af181cc3b8 768 PRINTS PR00941 Cadmium-transporting ATPase signature 247 267 6.2E-8 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 M892_05540 e4dac2e4213981dda78055af181cc3b8 768 Pfam PF00702 haloacid dehalogenase-like hydrolase 461 669 2.1E-37 T 12-10-2018 M892_05540 e4dac2e4213981dda78055af181cc3b8 768 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 212 521 4.1E-96 T 12-10-2018 M892_05540 e4dac2e4213981dda78055af181cc3b8 768 Gene3D G3DSA:2.70.150.20 262 367 2.5E-32 T 12-10-2018 M892_05540 e4dac2e4213981dda78055af181cc3b8 768 SUPERFAMILY SSF81653 265 362 8.5E-22 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 M892_05540 e4dac2e4213981dda78055af181cc3b8 768 Gene3D G3DSA:3.40.1110.10 474 591 2.4E-82 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 M892_05540 e4dac2e4213981dda78055af181cc3b8 768 Gene3D G3DSA:3.30.70.100 70 140 2.6E-13 T 12-10-2018 M892_05540 e4dac2e4213981dda78055af181cc3b8 768 SUPERFAMILY SSF56784 462 757 7.7E-51 T 12-10-2018 IPR036412 HAD-like superfamily M892_05540 e4dac2e4213981dda78055af181cc3b8 768 SUPERFAMILY SSF55008 72 136 1.44E-13 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 M892_05540 e4dac2e4213981dda78055af181cc3b8 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 606 616 1.1E-27 T 12-10-2018 M892_05540 e4dac2e4213981dda78055af181cc3b8 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 463 477 1.1E-27 T 12-10-2018 M892_05540 e4dac2e4213981dda78055af181cc3b8 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 584 595 1.1E-27 T 12-10-2018 M892_05540 e4dac2e4213981dda78055af181cc3b8 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 312 326 1.1E-27 T 12-10-2018 M892_05540 e4dac2e4213981dda78055af181cc3b8 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 657 676 1.1E-27 T 12-10-2018 M892_05540 e4dac2e4213981dda78055af181cc3b8 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 680 692 1.1E-27 T 12-10-2018 M892_08120 690ccf850f75457119af7a2b2007ae40 272 SUPERFAMILY SSF54423 54 110 1.29E-14 T 12-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 M892_08120 690ccf850f75457119af7a2b2007ae40 272 Gene3D G3DSA:3.40.30.10 113 272 4.8E-44 T 12-10-2018 M892_08120 690ccf850f75457119af7a2b2007ae40 272 SUPERFAMILY SSF52833 132 271 5.31E-37 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M892_08120 690ccf850f75457119af7a2b2007ae40 272 Pfam PF13098 Thioredoxin-like domain 141 269 3.5E-24 T 12-10-2018 IPR012336 Thioredoxin-like fold M892_08120 690ccf850f75457119af7a2b2007ae40 272 Pfam PF10411 Disulfide bond isomerase protein N-terminus 59 109 1.7E-13 T 12-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal M892_08120 690ccf850f75457119af7a2b2007ae40 272 Gene3D G3DSA:3.10.450.70 48 112 3.9E-19 T 12-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 M892_11305 7127e4c431210b589960d8fbf63e60d4 106 Pfam PF00581 Rhodanese-like domain 13 98 2.7E-11 T 12-10-2018 IPR001763 Rhodanese-like domain M892_11305 7127e4c431210b589960d8fbf63e60d4 106 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 2 105 31.999 T 12-10-2018 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927 M892_11305 7127e4c431210b589960d8fbf63e60d4 106 SUPERFAMILY SSF52821 1 105 1.57E-28 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily M892_11305 7127e4c431210b589960d8fbf63e60d4 106 Gene3D G3DSA:3.40.250.10 1 101 7.8E-26 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily M892_11305 7127e4c431210b589960d8fbf63e60d4 106 SMART SM00450 7 102 7.6E-18 T 12-10-2018 IPR001763 Rhodanese-like domain M892_10610 a909fcd6bbd97c2a817942ce1a3b8a03 84 Gene3D G3DSA:1.20.20.10 1 77 1.2E-27 T 12-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_10610 a909fcd6bbd97c2a817942ce1a3b8a03 84 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 19 76 1.2E-30 T 12-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 M892_10610 a909fcd6bbd97c2a817942ce1a3b8a03 84 SUPERFAMILY SSF81333 3 78 1.7E-19 T 12-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily M892_10610 a909fcd6bbd97c2a817942ce1a3b8a03 84 Pfam PF00137 ATP synthase subunit C 10 72 1.3E-10 T 12-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 M892_10610 a909fcd6bbd97c2a817942ce1a3b8a03 84 Hamap MF_01396 ATP synthase subunit c [atpH]. 9 74 13.874 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_10610 a909fcd6bbd97c2a817942ce1a3b8a03 84 PRINTS PR00124 ATP synthase C subunit signature 11 30 1.7E-6 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_10610 a909fcd6bbd97c2a817942ce1a3b8a03 84 PRINTS PR00124 ATP synthase C subunit signature 32 47 1.7E-6 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_10610 a909fcd6bbd97c2a817942ce1a3b8a03 84 PRINTS PR00124 ATP synthase C subunit signature 49 74 1.7E-6 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_10610 a909fcd6bbd97c2a817942ce1a3b8a03 84 ProSitePatterns PS00605 ATP synthase c subunit signature. 39 60 - T 12-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_00905 1f92f90441a827877eb705f17dd4354f 209 SUPERFAMILY SSF54862 1 202 2.41E-69 T 12-10-2018 M892_00905 1f92f90441a827877eb705f17dd4354f 209 Pfam PF13247 4Fe-4S dicluster domain 61 156 1.5E-30 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M892_00905 1f92f90441a827877eb705f17dd4354f 209 Pfam PF12800 4Fe-4S binding domain 14 28 0.048 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M892_00905 1f92f90441a827877eb705f17dd4354f 209 TIGRFAM TIGR02951 DMSO_dmsB: dimethylsulfoxide reductase, chain B 6 166 4.3E-83 T 12-10-2018 IPR014297 Dimethylsulphoxide reductase, chain B M892_00905 1f92f90441a827877eb705f17dd4354f 209 Gene3D G3DSA:3.30.70.20 1 198 6.6E-54 T 12-10-2018 M892_00905 1f92f90441a827877eb705f17dd4354f 209 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 102 113 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M892_12805 022b649da850117bd43bfe4c726618ef 273 Pfam PF00795 Carbon-nitrogen hydrolase 3 256 9.7E-54 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 M892_12805 022b649da850117bd43bfe4c726618ef 273 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 149 169 - T 12-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site M892_12805 022b649da850117bd43bfe4c726618ef 273 SUPERFAMILY SSF56317 3 263 1.31E-82 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily M892_12805 022b649da850117bd43bfe4c726618ef 273 Gene3D G3DSA:3.60.110.10 1 269 1.0E-90 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily M892_05890 1c6b470b78c2eda0b18c6532a63d163e 292 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 130 150 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 M892_05890 1c6b470b78c2eda0b18c6532a63d163e 292 TIGRFAM TIGR01929 menB: naphthoate synthase 29 288 2.5E-144 T 12-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 M892_05890 1c6b470b78c2eda0b18c6532a63d163e 292 Pfam PF00378 Enoyl-CoA hydratase/isomerase 38 286 8.1E-76 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 M892_05890 1c6b470b78c2eda0b18c6532a63d163e 292 SUPERFAMILY SSF52096 25 288 3.04E-76 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily M892_05890 1c6b470b78c2eda0b18c6532a63d163e 292 Gene3D G3DSA:3.90.226.10 7 229 5.0E-82 T 12-10-2018 M892_05890 1c6b470b78c2eda0b18c6532a63d163e 292 Gene3D G3DSA:1.10.12.10 230 280 5.5E-31 T 12-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal M892_05890 1c6b470b78c2eda0b18c6532a63d163e 292 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 22 291 55.755 T 12-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 M892_28720 1d3054a96076a8a7aaa423cd16c5c17b 418 Gene3D G3DSA:2.30.40.20 10 73 9.0E-38 T 12-10-2018 M892_28720 1d3054a96076a8a7aaa423cd16c5c17b 418 Gene3D G3DSA:3.30.70.270 4 156 9.0E-38 T 12-10-2018 M892_28720 1d3054a96076a8a7aaa423cd16c5c17b 418 SUPERFAMILY SSF56672 1 236 3.02E-64 T 12-10-2018 M892_28720 1d3054a96076a8a7aaa423cd16c5c17b 418 Pfam PF11799 impB/mucB/samB family C-terminal domain 239 355 9.8E-11 T 12-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 M892_28720 1d3054a96076a8a7aaa423cd16c5c17b 418 Pfam PF13438 Domain of unknown function (DUF4113) 367 416 8.4E-22 T 12-10-2018 IPR025188 Domain of unknown function DUF4113 M892_28720 1d3054a96076a8a7aaa423cd16c5c17b 418 Gene3D G3DSA:1.10.150.20 170 226 1.8E-7 T 12-10-2018 M892_28720 1d3054a96076a8a7aaa423cd16c5c17b 418 Pfam PF00817 impB/mucB/samB family 5 151 6.6E-32 T 12-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 M892_08270 1685109b1a585be5f800cd68ac9ce074 1487 Pfam PF04898 Glutamate synthase central domain 458 738 1.2E-101 T 12-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 M892_08270 1685109b1a585be5f800cd68ac9ce074 1487 Gene3D G3DSA:3.20.20.70 431 793 0.0 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M892_08270 1685109b1a585be5f800cd68ac9ce074 1487 Pfam PF00310 Glutamine amidotransferases class-II 13 426 5.3E-177 T 12-10-2018 IPR017932 Glutamine amidotransferase type 2 domain M892_08270 1685109b1a585be5f800cd68ac9ce074 1487 Gene3D G3DSA:3.20.20.70 484 1172 0.0 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M892_08270 1685109b1a585be5f800cd68ac9ce074 1487 Pfam PF01493 GXGXG motif 1236 1419 1.6E-73 T 12-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 M892_08270 1685109b1a585be5f800cd68ac9ce074 1487 Pfam PF01645 Conserved region in glutamate synthase 794 1157 3.9E-152 T 12-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 M892_08270 1685109b1a585be5f800cd68ac9ce074 1487 SUPERFAMILY SSF56235 13 429 4.48E-149 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal M892_08270 1685109b1a585be5f800cd68ac9ce074 1487 Gene3D G3DSA:2.160.20.60 1200 1468 2.2E-101 T 12-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 M892_08270 1685109b1a585be5f800cd68ac9ce074 1487 Gene3D G3DSA:3.60.20.10 13 546 0.0 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal M892_08270 1685109b1a585be5f800cd68ac9ce074 1487 SUPERFAMILY SSF69336 1214 1465 3.53E-87 T 12-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 M892_08270 1685109b1a585be5f800cd68ac9ce074 1487 SUPERFAMILY SSF51395 434 1191 1.69E-249 T 12-10-2018 M892_07990 a099696e3f80822b905a72ec624d4d63 321 Gene3D G3DSA:3.40.1010.20 10 287 3.5E-108 T 12-10-2018 M892_07990 a099696e3f80822b905a72ec624d4d63 321 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 5 292 37.899 T 12-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 M892_07990 a099696e3f80822b905a72ec624d4d63 321 Gene3D G3DSA:3.40.1010.20 101 202 3.5E-108 T 12-10-2018 M892_07990 a099696e3f80822b905a72ec624d4d63 321 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 6 290 3.1E-98 T 12-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 M892_07990 a099696e3f80822b905a72ec624d4d63 321 Pfam PF02401 LytB protein 7 288 3.7E-92 T 12-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 M892_07990 a099696e3f80822b905a72ec624d4d63 321 Gene3D G3DSA:3.40.50.11270 16 100 3.5E-108 T 12-10-2018 M892_11285 77d1bc972d69313899af426585ffbe3d 408 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 132 404 1.0E-115 T 12-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 M892_11285 77d1bc972d69313899af426585ffbe3d 408 Pfam PF02881 SRP54-type protein, helical bundle domain 124 185 1.3E-13 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 M892_11285 77d1bc972d69313899af426585ffbe3d 408 SMART SM00962 204 405 2.1E-123 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 M892_11285 77d1bc972d69313899af426585ffbe3d 408 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 132 405 65.219 T 12-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 M892_11285 77d1bc972d69313899af426585ffbe3d 408 SUPERFAMILY SSF52540 202 405 3.94E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_11285 77d1bc972d69313899af426585ffbe3d 408 Pfam PF00448 SRP54-type protein, GTPase domain 205 404 1.2E-77 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 M892_11285 77d1bc972d69313899af426585ffbe3d 408 SMART SM00963 109 189 2.2E-27 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 M892_11285 77d1bc972d69313899af426585ffbe3d 408 Gene3D G3DSA:1.20.120.140 106 403 1.1E-117 T 12-10-2018 M892_11285 77d1bc972d69313899af426585ffbe3d 408 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 378 391 - T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 M892_11285 77d1bc972d69313899af426585ffbe3d 408 Gene3D G3DSA:3.40.50.300 201 393 1.1E-117 T 12-10-2018 M892_11285 77d1bc972d69313899af426585ffbe3d 408 SMART SM00382 203 395 1.4E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_11285 77d1bc972d69313899af426585ffbe3d 408 SUPERFAMILY SSF47364 104 183 1.31E-22 T 12-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 M892_01470 d02e4f0c3ee90092f5aa695194582b23 480 Pfam PF01569 PAP2 superfamily 242 353 4.6E-7 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase M892_01470 d02e4f0c3ee90092f5aa695194582b23 480 Pfam PF00293 NUDIX domain 33 121 5.7E-11 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 M892_01470 d02e4f0c3ee90092f5aa695194582b23 480 Gene3D G3DSA:3.90.79.10 17 125 3.7E-14 T 12-10-2018 M892_01470 d02e4f0c3ee90092f5aa695194582b23 480 SUPERFAMILY SSF48317 205 354 3.92E-7 T 12-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily M892_01470 d02e4f0c3ee90092f5aa695194582b23 480 SUPERFAMILY SSF55811 27 150 1.9E-17 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 M892_01470 d02e4f0c3ee90092f5aa695194582b23 480 ProSitePatterns PS00893 Nudix box signature. 59 80 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 M892_11510 1fd1bdd1f016a744bb714c8f5c6c6de1 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 12-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_11510 1fd1bdd1f016a744bb714c8f5c6c6de1 142 SMART SM00649 9 141 2.4E-82 T 12-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 M892_11510 1fd1bdd1f016a744bb714c8f5c6c6de1 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 1.5E-23 T 12-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 M892_11510 1fd1bdd1f016a744bb714c8f5c6c6de1 142 Gene3D G3DSA:3.30.1550.10 2 72 3.3E-34 T 12-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily M892_11510 1fd1bdd1f016a744bb714c8f5c6c6de1 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.534 T 12-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 M892_11510 1fd1bdd1f016a744bb714c8f5c6c6de1 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 4.7E-64 T 12-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_11510 1fd1bdd1f016a744bb714c8f5c6c6de1 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 1.0E-29 T 12-10-2018 IPR020784 Ribosomal protein L11, N-terminal M892_11510 1fd1bdd1f016a744bb714c8f5c6c6de1 142 SUPERFAMILY SSF54747 3 73 4.84E-30 T 12-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily M892_11510 1fd1bdd1f016a744bb714c8f5c6c6de1 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 71 2.0E-14 T 12-10-2018 M892_11510 1fd1bdd1f016a744bb714c8f5c6c6de1 142 Gene3D G3DSA:1.10.10.250 73 141 1.1E-25 T 12-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily M892_11510 1fd1bdd1f016a744bb714c8f5c6c6de1 142 SUPERFAMILY SSF46906 68 141 2.88E-25 T 12-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily M892_26490 aef58839191eaf0cb16529de2744ae74 447 PIRSF PIRSF006066 20 447 1.7E-110 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 M892_26490 aef58839191eaf0cb16529de2744ae74 447 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 27 436 2.6E-92 T 12-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit M892_26490 aef58839191eaf0cb16529de2744ae74 447 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 38 439 4.7E-102 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 M892_10540 4a6a01dea1c7255f60bd64e60971ae46 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 166 186 1.7E-54 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like M892_10540 4a6a01dea1c7255f60bd64e60971ae46 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 198 212 1.7E-54 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like M892_10540 4a6a01dea1c7255f60bd64e60971ae46 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 230 244 1.7E-54 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like M892_10540 4a6a01dea1c7255f60bd64e60971ae46 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 264 291 1.7E-54 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like M892_10540 4a6a01dea1c7255f60bd64e60971ae46 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 426 445 1.7E-54 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like M892_10540 4a6a01dea1c7255f60bd64e60971ae46 468 Gene3D G3DSA:1.10.8.60 299 369 1.6E-24 T 12-10-2018 M892_10540 4a6a01dea1c7255f60bd64e60971ae46 468 Gene3D G3DSA:3.30.300.180 2 114 3.2E-42 T 12-10-2018 IPR038454 DnaA, N-terminal domain superfamily M892_10540 4a6a01dea1c7255f60bd64e60971ae46 468 Pfam PF11638 DnaA N-terminal domain 4 65 6.3E-20 T 12-10-2018 IPR024633 DnaA N-terminal domain M892_10540 4a6a01dea1c7255f60bd64e60971ae46 468 ProSitePatterns PS01008 DnaA protein signature. 426 445 - T 12-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 M892_10540 4a6a01dea1c7255f60bd64e60971ae46 468 SUPERFAMILY SSF52540 133 344 2.47E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_10540 4a6a01dea1c7255f60bd64e60971ae46 468 SMART SM00760 376 445 3.4E-45 T 12-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 M892_10540 4a6a01dea1c7255f60bd64e60971ae46 468 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 377 445 1.8E-32 T 12-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 M892_10540 4a6a01dea1c7255f60bd64e60971ae46 468 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 6 466 6.4E-187 T 12-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 M892_10540 4a6a01dea1c7255f60bd64e60971ae46 468 Pfam PF00308 Bacterial dnaA protein 134 350 1.2E-97 T 12-10-2018 IPR013317 Chromosomal replication initiator protein DnaA M892_10540 4a6a01dea1c7255f60bd64e60971ae46 468 SUPERFAMILY SSF48295 364 467 3.66E-38 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 M892_10540 4a6a01dea1c7255f60bd64e60971ae46 468 Gene3D G3DSA:1.10.1750.10 375 468 1.5E-39 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 M892_10540 4a6a01dea1c7255f60bd64e60971ae46 468 SMART SM00382 165 378 4.6E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_10540 4a6a01dea1c7255f60bd64e60971ae46 468 Gene3D G3DSA:3.40.50.300 118 297 4.0E-49 T 12-10-2018 M892_10540 4a6a01dea1c7255f60bd64e60971ae46 468 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 3 467 34.468 T 12-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 M892_13695 c379d31acd586af7a8337fe5f1bd3db7 182 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 13 182 23.981 T 12-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 M892_13695 c379d31acd586af7a8337fe5f1bd3db7 182 Pfam PF01782 RimM N-terminal domain 15 95 5.1E-25 T 12-10-2018 IPR002676 RimM, N-terminal GO:0006364 M892_13695 c379d31acd586af7a8337fe5f1bd3db7 182 Pfam PF05239 PRC-barrel domain 103 168 4.2E-12 T 12-10-2018 IPR027275 PRC-barrel domain M892_13695 c379d31acd586af7a8337fe5f1bd3db7 182 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 14 182 8.1E-56 T 12-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 M892_13695 c379d31acd586af7a8337fe5f1bd3db7 182 SUPERFAMILY SSF50346 106 182 2.94E-20 T 12-10-2018 IPR011033 PRC-barrel-like superfamily M892_13695 c379d31acd586af7a8337fe5f1bd3db7 182 Gene3D G3DSA:2.40.30.60 4 100 2.7E-32 T 12-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 M892_13695 c379d31acd586af7a8337fe5f1bd3db7 182 Gene3D G3DSA:2.30.30.240 101 182 5.7E-31 T 12-10-2018 M892_13695 c379d31acd586af7a8337fe5f1bd3db7 182 SUPERFAMILY SSF50447 13 100 1.48E-23 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily M892_12605 0db68fb72c74142ca76280859e246c0a 578 Gene3D G3DSA:3.90.480.20 21 422 5.1E-83 T 12-10-2018 M892_12605 0db68fb72c74142ca76280859e246c0a 578 SUPERFAMILY SSF56014 435 566 1.44E-32 T 12-10-2018 M892_12605 0db68fb72c74142ca76280859e246c0a 578 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 15 578 58.07 T 12-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 M892_12605 0db68fb72c74142ca76280859e246c0a 578 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 437 564 2.4E-5 T 12-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 M892_12605 0db68fb72c74142ca76280859e246c0a 578 PRINTS PR00397 Sirohaem Fe-binding site signature 485 503 4.7E-9 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 M892_12605 0db68fb72c74142ca76280859e246c0a 578 PRINTS PR00397 Sirohaem Fe-binding site signature 436 454 4.7E-9 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 M892_12605 0db68fb72c74142ca76280859e246c0a 578 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 178 337 7.3E-45 T 12-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 M892_12605 0db68fb72c74142ca76280859e246c0a 578 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 24 566 1.4E-283 T 12-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 M892_12605 0db68fb72c74142ca76280859e246c0a 578 SUPERFAMILY SSF55124 18 150 2.45E-27 T 12-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 M892_12605 0db68fb72c74142ca76280859e246c0a 578 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 84 143 6.7E-14 T 12-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 M892_12605 0db68fb72c74142ca76280859e246c0a 578 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 359 423 1.9E-13 T 12-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 M892_12605 0db68fb72c74142ca76280859e246c0a 578 SUPERFAMILY SSF56014 154 350 1.02E-57 T 12-10-2018 M892_12605 0db68fb72c74142ca76280859e246c0a 578 Gene3D G3DSA:3.30.413.10 146 354 5.1E-83 T 12-10-2018 M892_12605 0db68fb72c74142ca76280859e246c0a 578 SUPERFAMILY SSF55124 352 429 8.07E-21 T 12-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 M892_12605 0db68fb72c74142ca76280859e246c0a 578 Gene3D G3DSA:3.30.413.10 432 575 5.6E-35 T 12-10-2018 M892_12605 0db68fb72c74142ca76280859e246c0a 578 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 485 501 - T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 M892_23125 a58489b3e590b097611249ce7988753f 420 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 344 365 2.0E-39 T 12-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 M892_23125 a58489b3e590b097611249ce7988753f 420 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 112 132 2.0E-39 T 12-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 M892_23125 a58489b3e590b097611249ce7988753f 420 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 81 102 2.0E-39 T 12-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 M892_23125 a58489b3e590b097611249ce7988753f 420 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 242 267 2.0E-39 T 12-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 M892_23125 a58489b3e590b097611249ce7988753f 420 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 201 219 2.0E-39 T 12-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 M892_23125 a58489b3e590b097611249ce7988753f 420 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 291 317 2.0E-39 T 12-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 M892_23125 a58489b3e590b097611249ce7988753f 420 Gene3D G3DSA:3.30.70.420 146 261 4.1E-112 T 12-10-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 M892_23125 a58489b3e590b097611249ce7988753f 420 SUPERFAMILY SSF55035 146 261 4.32E-36 T 12-10-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 M892_23125 a58489b3e590b097611249ce7988753f 420 Pfam PF00368 Hydroxymethylglutaryl-coenzyme A reductase 50 419 6.1E-115 T 12-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 M892_23125 a58489b3e590b097611249ce7988753f 420 ProSitePatterns PS00318 Hydroxymethylglutaryl-coenzyme A reductases signature 2. 356 363 - T 12-10-2018 IPR023076 Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 M892_23125 a58489b3e590b097611249ce7988753f 420 Gene3D G3DSA:3.90.770.10 92 405 4.1E-112 T 12-10-2018 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain superfamily GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 M892_23125 a58489b3e590b097611249ce7988753f 420 SUPERFAMILY SSF56542 27 409 5.62E-80 T 12-10-2018 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain superfamily GO:0015936|GO:0016616|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 M892_08620 574a8c878a1e0e672a6864b535ddf8cf 353 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 16 346 63.429 T 12-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 M892_08620 574a8c878a1e0e672a6864b535ddf8cf 353 SUPERFAMILY SSF53067 116 324 6.91E-43 T 12-10-2018 M892_08620 574a8c878a1e0e672a6864b535ddf8cf 353 ProSitePatterns PS01016 Glycoprotease family signature. 111 131 - T 12-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 M892_08620 574a8c878a1e0e672a6864b535ddf8cf 353 Pfam PF00814 Glycoprotease family 39 322 2.5E-102 T 12-10-2018 IPR000905 Gcp-like domain M892_08620 574a8c878a1e0e672a6864b535ddf8cf 353 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 146 158 8.8E-50 T 12-10-2018 IPR017861 Kae1/TsaD family M892_08620 574a8c878a1e0e672a6864b535ddf8cf 353 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 19 32 8.8E-50 T 12-10-2018 IPR017861 Kae1/TsaD family M892_08620 574a8c878a1e0e672a6864b535ddf8cf 353 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 91 111 8.8E-50 T 12-10-2018 IPR017861 Kae1/TsaD family M892_08620 574a8c878a1e0e672a6864b535ddf8cf 353 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 278 287 8.8E-50 T 12-10-2018 IPR017861 Kae1/TsaD family M892_08620 574a8c878a1e0e672a6864b535ddf8cf 353 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 169 190 8.8E-50 T 12-10-2018 IPR017861 Kae1/TsaD family M892_08620 574a8c878a1e0e672a6864b535ddf8cf 353 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 112 131 8.8E-50 T 12-10-2018 IPR017861 Kae1/TsaD family M892_08620 574a8c878a1e0e672a6864b535ddf8cf 353 Gene3D G3DSA:3.30.420.40 144 308 1.2E-130 T 12-10-2018 M892_08620 574a8c878a1e0e672a6864b535ddf8cf 353 SUPERFAMILY SSF53067 18 138 9.5E-31 T 12-10-2018 M892_08620 574a8c878a1e0e672a6864b535ddf8cf 353 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 20 321 3.1E-122 T 12-10-2018 IPR017861 Kae1/TsaD family M892_08620 574a8c878a1e0e672a6864b535ddf8cf 353 Gene3D G3DSA:3.30.420.40 18 330 1.2E-130 T 12-10-2018 M892_08620 574a8c878a1e0e672a6864b535ddf8cf 353 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 18 328 1.5E-133 T 12-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 M892_03825 8dbfbae7e3a7538bb4671af94e89e97c 336 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 219 228 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site M892_03825 8dbfbae7e3a7538bb4671af94e89e97c 336 Pfam PF02954 Bacterial regulatory protein, Fis family 296 324 2.0E-6 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M892_03825 8dbfbae7e3a7538bb4671af94e89e97c 336 Pfam PF00158 Sigma-54 interaction domain 5 167 2.0E-57 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 M892_03825 8dbfbae7e3a7538bb4671af94e89e97c 336 SUPERFAMILY SSF52540 4 238 2.34E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_03825 8dbfbae7e3a7538bb4671af94e89e97c 336 SUPERFAMILY SSF46689 219 332 9.86E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_03825 8dbfbae7e3a7538bb4671af94e89e97c 336 Gene3D G3DSA:1.10.8.60 177 259 5.3E-26 T 12-10-2018 M892_03825 8dbfbae7e3a7538bb4671af94e89e97c 336 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 5 330 1.1E-165 T 12-10-2018 IPR014317 Transcription activator PspF M892_03825 8dbfbae7e3a7538bb4671af94e89e97c 336 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 313 333 8.1E-9 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M892_03825 8dbfbae7e3a7538bb4671af94e89e97c 336 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 296 313 8.1E-9 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M892_03825 8dbfbae7e3a7538bb4671af94e89e97c 336 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 91 106 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 M892_03825 8dbfbae7e3a7538bb4671af94e89e97c 336 Gene3D G3DSA:3.40.50.300 1 176 8.8E-58 T 12-10-2018 M892_03825 8dbfbae7e3a7538bb4671af94e89e97c 336 PRINTS PR00819 CbxX/CfqX superfamily signature 88 107 6.0E-5 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 M892_03825 8dbfbae7e3a7538bb4671af94e89e97c 336 PRINTS PR00819 CbxX/CfqX superfamily signature 1 7 6.0E-5 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 M892_03825 8dbfbae7e3a7538bb4671af94e89e97c 336 PRINTS PR00819 CbxX/CfqX superfamily signature 222 234 6.0E-5 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 M892_03825 8dbfbae7e3a7538bb4671af94e89e97c 336 SMART SM00382 25 177 1.3E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_03825 8dbfbae7e3a7538bb4671af94e89e97c 336 Gene3D G3DSA:1.10.10.60 262 333 1.5E-7 T 12-10-2018 M892_16055 107f1ee9c7d83d1d9fd710619d464c9c 214 Gene3D G3DSA:3.30.420.10 9 214 7.3E-55 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M892_16055 107f1ee9c7d83d1d9fd710619d464c9c 214 SUPERFAMILY SSF53098 10 208 9.34E-57 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_16055 107f1ee9c7d83d1d9fd710619d464c9c 214 TIGRFAM TIGR01298 RNaseT: ribonuclease T 10 209 2.0E-99 T 12-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 M892_16055 107f1ee9c7d83d1d9fd710619d464c9c 214 Hamap MF_00157 Ribonuclease T [rnt]. 1 214 115.486 T 12-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 M892_16055 107f1ee9c7d83d1d9fd710619d464c9c 214 Pfam PF00929 Exonuclease 20 195 1.4E-45 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III M892_16055 107f1ee9c7d83d1d9fd710619d464c9c 214 SMART SM00479 18 204 8.9E-30 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III M892_07770 4baf9c1926e82767eb52c3a2cb51c974 432 SUPERFAMILY SSF47384 192 271 1.55E-18 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M892_07770 4baf9c1926e82767eb52c3a2cb51c974 432 SMART SM00091 98 166 5.1E-6 T 12-10-2018 IPR000014 PAS domain M892_07770 4baf9c1926e82767eb52c3a2cb51c974 432 SMART SM00387 317 429 1.8E-32 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_07770 4baf9c1926e82767eb52c3a2cb51c974 432 Pfam PF11808 Domain of unknown function (DUF3329) 7 91 8.6E-31 T 12-10-2018 IPR021766 Phosphate regulon sensor protein PhoR GO:0000155|GO:0000160|GO:0004721 M892_07770 4baf9c1926e82767eb52c3a2cb51c974 432 Pfam PF00989 PAS fold 99 168 7.7E-8 T 12-10-2018 IPR013767 PAS fold GO:0006355 M892_07770 4baf9c1926e82767eb52c3a2cb51c974 432 SUPERFAMILY SSF55785 86 196 2.09E-11 T 12-10-2018 IPR035965 PAS domain superfamily M892_07770 4baf9c1926e82767eb52c3a2cb51c974 432 SUPERFAMILY SSF55874 261 427 9.43E-40 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_07770 4baf9c1926e82767eb52c3a2cb51c974 432 Pfam PF00512 His Kinase A (phospho-acceptor) domain 205 271 4.2E-16 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M892_07770 4baf9c1926e82767eb52c3a2cb51c974 432 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 99 204 6.0E-6 T 12-10-2018 IPR000014 PAS domain M892_07770 4baf9c1926e82767eb52c3a2cb51c974 432 SMART SM00388 205 272 1.7E-19 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M892_07770 4baf9c1926e82767eb52c3a2cb51c974 432 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 94 425 9.3E-138 T 12-10-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 M892_07770 4baf9c1926e82767eb52c3a2cb51c974 432 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 317 427 6.6E-23 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_07770 4baf9c1926e82767eb52c3a2cb51c974 432 Gene3D G3DSA:1.10.287.130 202 272 2.7E-20 T 12-10-2018 M892_07770 4baf9c1926e82767eb52c3a2cb51c974 432 Gene3D G3DSA:3.30.565.10 284 429 8.4E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_07770 4baf9c1926e82767eb52c3a2cb51c974 432 Gene3D G3DSA:3.30.450.20 85 201 3.7E-10 T 12-10-2018 M892_07770 4baf9c1926e82767eb52c3a2cb51c974 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 426 2.4E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_07770 4baf9c1926e82767eb52c3a2cb51c974 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 382 2.4E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_07770 4baf9c1926e82767eb52c3a2cb51c974 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 368 2.4E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_07770 4baf9c1926e82767eb52c3a2cb51c974 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 407 2.4E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_24040 791afcf7cc95da9057b2a35710e26d20 301 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 169 295 2.9E-29 T 12-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 M892_24040 791afcf7cc95da9057b2a35710e26d20 301 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 166 9.9E-49 T 12-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 M892_24040 791afcf7cc95da9057b2a35710e26d20 301 PIRSF PIRSF000103 1 301 3.5E-76 T 12-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 M892_24040 791afcf7cc95da9057b2a35710e26d20 301 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 12-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 M892_24040 791afcf7cc95da9057b2a35710e26d20 301 Gene3D G3DSA:3.40.50.720 1 167 2.3E-51 T 12-10-2018 M892_24040 791afcf7cc95da9057b2a35710e26d20 301 SUPERFAMILY SSF51735 3 167 1.23E-42 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_24040 791afcf7cc95da9057b2a35710e26d20 301 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 6 297 2.2E-118 T 12-10-2018 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|Reactome: R-HSA-70895 M892_24040 791afcf7cc95da9057b2a35710e26d20 301 SUPERFAMILY SSF48179 168 298 2.83E-39 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 M892_24040 791afcf7cc95da9057b2a35710e26d20 301 Gene3D G3DSA:1.10.1040.10 169 301 9.6E-43 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 M892_13880 d62a89ed2f2641dab9abc7993886ed4f 771 SUPERFAMILY SSF52151 38 322 3.4E-57 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase M892_13880 d62a89ed2f2641dab9abc7993886ed4f 771 Pfam PF07244 Surface antigen variable number repeat 354 423 5.6E-5 T 12-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 M892_13880 d62a89ed2f2641dab9abc7993886ed4f 771 Gene3D G3DSA:3.10.20.310 349 424 2.2E-6 T 12-10-2018 M892_13880 d62a89ed2f2641dab9abc7993886ed4f 771 Gene3D G3DSA:3.40.1090.10 27 134 8.3E-29 T 12-10-2018 M892_13880 d62a89ed2f2641dab9abc7993886ed4f 771 Gene3D G3DSA:3.40.1090.10 147 288 3.4E-18 T 12-10-2018 M892_13880 d62a89ed2f2641dab9abc7993886ed4f 771 Pfam PF01734 Patatin-like phospholipase 44 234 5.8E-30 T 12-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 M892_04355 8f5e0d454cad25032a11e436bcb5d2fe 261 Gene3D G3DSA:3.40.50.1980 48 158 4.1E-15 T 12-10-2018 M892_04355 8f5e0d454cad25032a11e436bcb5d2fe 261 Pfam PF01497 Periplasmic binding protein 50 248 1.5E-14 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain M892_04355 8f5e0d454cad25032a11e436bcb5d2fe 261 SUPERFAMILY SSF53807 48 260 1.18E-31 T 12-10-2018 M892_04355 8f5e0d454cad25032a11e436bcb5d2fe 261 Gene3D G3DSA:3.40.50.1980 159 261 7.4E-7 T 12-10-2018 M892_14820 dc41c0fc9541505967e1f1d0dd8da951 571 SUPERFAMILY SSF52954 463 570 5.89E-34 T 12-10-2018 M892_14820 dc41c0fc9541505967e1f1d0dd8da951 571 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 571 40.919 T 12-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 M892_14820 dc41c0fc9541505967e1f1d0dd8da951 571 Gene3D G3DSA:3.40.50.800 4 555 4.2E-234 T 12-10-2018 IPR036621 Anticodon-binding domain superfamily M892_14820 dc41c0fc9541505967e1f1d0dd8da951 571 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 459 2.0E-39 T 12-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 M892_14820 dc41c0fc9541505967e1f1d0dd8da951 571 SUPERFAMILY SSF55826 218 390 3.4E-30 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 M892_14820 dc41c0fc9541505967e1f1d0dd8da951 571 Pfam PF04073 Aminoacyl-tRNA editing domain 257 378 7.5E-25 T 12-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 M892_14820 dc41c0fc9541505967e1f1d0dd8da951 571 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 568 7.5E-246 T 12-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 M892_14820 dc41c0fc9541505967e1f1d0dd8da951 571 Gene3D G3DSA:3.30.930.10 11 465 4.2E-234 T 12-10-2018 M892_14820 dc41c0fc9541505967e1f1d0dd8da951 571 PIRSF PIRSF001535 1 571 2.9E-265 T 12-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 M892_14820 dc41c0fc9541505967e1f1d0dd8da951 571 SUPERFAMILY SSF55681 10 478 4.61E-98 T 12-10-2018 M892_14820 dc41c0fc9541505967e1f1d0dd8da951 571 Pfam PF03129 Anticodon binding domain 475 568 1.3E-22 T 12-10-2018 IPR004154 Anticodon-binding M892_14820 dc41c0fc9541505967e1f1d0dd8da951 571 Gene3D G3DSA:3.90.960.10 240 389 4.2E-234 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 M892_14820 dc41c0fc9541505967e1f1d0dd8da951 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 2.4E-16 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 M892_14820 dc41c0fc9541505967e1f1d0dd8da951 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 2.4E-16 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 M892_14820 dc41c0fc9541505967e1f1d0dd8da951 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 2.4E-16 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 M892_14820 dc41c0fc9541505967e1f1d0dd8da951 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 2.4E-16 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 M892_08615 6f979a69c9738817e94e00a5b90d58cf 275 Gene3D G3DSA:3.40.50.1820 3 275 3.8E-55 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_08615 6f979a69c9738817e94e00a5b90d58cf 275 Pfam PF00561 alpha/beta hydrolase fold 27 257 3.5E-19 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 M892_08615 6f979a69c9738817e94e00a5b90d58cf 275 PRINTS PR00412 Epoxide hydrolase signature 49 64 2.7E-8 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 M892_08615 6f979a69c9738817e94e00a5b90d58cf 275 PRINTS PR00412 Epoxide hydrolase signature 108 121 2.7E-8 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 M892_08615 6f979a69c9738817e94e00a5b90d58cf 275 PRINTS PR00412 Epoxide hydrolase signature 247 269 2.7E-8 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 M892_08615 6f979a69c9738817e94e00a5b90d58cf 275 SUPERFAMILY SSF53474 2 272 3.18E-59 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_08615 6f979a69c9738817e94e00a5b90d58cf 275 PRINTS PR00111 Alpha/beta hydrolase fold signature 49 64 2.1E-10 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 M892_08615 6f979a69c9738817e94e00a5b90d58cf 275 PRINTS PR00111 Alpha/beta hydrolase fold signature 216 230 2.1E-10 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 M892_08615 6f979a69c9738817e94e00a5b90d58cf 275 PRINTS PR00111 Alpha/beta hydrolase fold signature 94 107 2.1E-10 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 M892_08615 6f979a69c9738817e94e00a5b90d58cf 275 PRINTS PR00111 Alpha/beta hydrolase fold signature 108 121 2.1E-10 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 M892_21340 6bd763ecec52c2b681b482b5b40de91f 717 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 10 711 5.6E-242 T 12-10-2018 IPR010020 Integral membrane protein, YccS/YhfK M892_21340 6bd763ecec52c2b681b482b5b40de91f 717 Pfam PF12805 FUSC-like inner membrane protein yccS 68 348 5.0E-114 T 12-10-2018 IPR032692 Integral membrane protein YccS, N-terminal M892_21340 6bd763ecec52c2b681b482b5b40de91f 717 Pfam PF13515 Fusaric acid resistance protein-like 405 523 3.0E-22 T 12-10-2018 M892_21340 6bd763ecec52c2b681b482b5b40de91f 717 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 10 712 0.0 T 12-10-2018 IPR010019 Integral membrane protein, YccS M892_02835 38ebc5d72b22f05bce95fdcbb770c91f 327 SUPERFAMILY SSF46589 14 99 2.98E-22 T 12-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 M892_02835 38ebc5d72b22f05bce95fdcbb770c91f 327 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 327 6.0E-112 T 12-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 M892_02835 38ebc5d72b22f05bce95fdcbb770c91f 327 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 2.7E-25 T 12-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 M892_02835 38ebc5d72b22f05bce95fdcbb770c91f 327 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 326 49.204 T 12-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 M892_02835 38ebc5d72b22f05bce95fdcbb770c91f 327 Gene3D G3DSA:3.30.930.10 7 327 6.1E-127 T 12-10-2018 M892_02835 38ebc5d72b22f05bce95fdcbb770c91f 327 SUPERFAMILY SSF55681 92 327 1.35E-82 T 12-10-2018 M892_02835 38ebc5d72b22f05bce95fdcbb770c91f 327 Pfam PF01409 tRNA synthetases class II core domain (F) 92 326 1.3E-106 T 12-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 M892_08365 cd586e359b7fd19f533dc6d4a448bd04 420 SUPERFAMILY SSF53067 198 384 2.13E-45 T 12-10-2018 M892_08365 cd586e359b7fd19f533dc6d4a448bd04 420 SMART SM00842 10 196 6.8E-95 T 12-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 M892_08365 cd586e359b7fd19f533dc6d4a448bd04 420 SUPERFAMILY SSF53067 8 221 1.06E-59 T 12-10-2018 M892_08365 cd586e359b7fd19f533dc6d4a448bd04 420 Gene3D G3DSA:3.30.420.40 13 379 1.1E-110 T 12-10-2018 M892_08365 cd586e359b7fd19f533dc6d4a448bd04 420 Pfam PF02491 SHS2 domain inserted in FTSA 85 161 2.5E-28 T 12-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 M892_08365 cd586e359b7fd19f533dc6d4a448bd04 420 PIRSF PIRSF003101 1 420 5.9E-146 T 12-10-2018 IPR020823 Cell division protein FtsA M892_08365 cd586e359b7fd19f533dc6d4a448bd04 420 Pfam PF14450 Cell division protein FtsA 207 381 6.7E-24 T 12-10-2018 M892_08365 cd586e359b7fd19f533dc6d4a448bd04 420 Gene3D G3DSA:3.30.420.40 197 359 1.1E-110 T 12-10-2018 M892_08365 cd586e359b7fd19f533dc6d4a448bd04 420 Gene3D G3DSA:3.30.1490.110 87 169 1.1E-110 T 12-10-2018 M892_08365 cd586e359b7fd19f533dc6d4a448bd04 420 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 420 29.167 T 12-10-2018 IPR020823 Cell division protein FtsA M892_08365 cd586e359b7fd19f533dc6d4a448bd04 420 Gene3D G3DSA:3.90.640.10 235 300 1.1E-110 T 12-10-2018 M892_08365 cd586e359b7fd19f533dc6d4a448bd04 420 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 385 1.1E-150 T 12-10-2018 IPR020823 Cell division protein FtsA M892_22600 5d7b25035a8c09f8c3150a7837fc38a1 305 PIRSF PIRSF037505 7 303 5.2E-12 T 12-10-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 M892_22600 5d7b25035a8c09f8c3150a7837fc38a1 305 Gene3D G3DSA:3.20.20.330 2 304 5.2E-63 T 12-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 M892_22600 5d7b25035a8c09f8c3150a7837fc38a1 305 SUPERFAMILY SSF82282 5 304 5.36E-71 T 12-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 M892_22600 5d7b25035a8c09f8c3150a7837fc38a1 305 Pfam PF02574 Homocysteine S-methyltransferase 10 300 5.6E-56 T 12-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 M892_05950 30db4e598d869adc2ce98ef16e26914e 783 Hamap MF_01973 Lon protease [lon]. 11 771 71.872 T 12-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 M892_05950 30db4e598d869adc2ce98ef16e26914e 783 Gene3D G3DSA:2.30.130.40 1 116 1.9E-35 T 12-10-2018 M892_05950 30db4e598d869adc2ce98ef16e26914e 783 SUPERFAMILY SSF52540 312 586 5.85E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_05950 30db4e598d869adc2ce98ef16e26914e 783 Gene3D G3DSA:3.30.230.10 584 771 7.7E-85 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M892_05950 30db4e598d869adc2ce98ef16e26914e 783 PIRSF PIRSF001174 1 774 0.0 T 12-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 M892_05950 30db4e598d869adc2ce98ef16e26914e 783 SUPERFAMILY SSF88697 10 200 3.48E-48 T 12-10-2018 IPR015947 PUA-like superfamily M892_05950 30db4e598d869adc2ce98ef16e26914e 783 Gene3D G3DSA:3.40.50.300 312 489 2.0E-60 T 12-10-2018 M892_05950 30db4e598d869adc2ce98ef16e26914e 783 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 675 683 - T 12-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 M892_05950 30db4e598d869adc2ce98ef16e26914e 783 Gene3D G3DSA:1.20.58.1480 119 244 5.4E-44 T 12-10-2018 M892_05950 30db4e598d869adc2ce98ef16e26914e 783 SMART SM00464 10 201 3.4E-76 T 12-10-2018 IPR003111 Lon, substrate-binding domain M892_05950 30db4e598d869adc2ce98ef16e26914e 783 TIGRFAM TIGR00763 lon: endopeptidase La 12 770 0.0 T 12-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 M892_05950 30db4e598d869adc2ce98ef16e26914e 783 SMART SM00382 347 491 6.3E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_05950 30db4e598d869adc2ce98ef16e26914e 783 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 351 487 9.3E-17 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 M892_05950 30db4e598d869adc2ce98ef16e26914e 783 SUPERFAMILY SSF54211 594 769 3.79E-59 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold M892_05950 30db4e598d869adc2ce98ef16e26914e 783 Gene3D G3DSA:1.10.8.60 490 583 3.1E-33 T 12-10-2018 M892_05950 30db4e598d869adc2ce98ef16e26914e 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 594 610 1.8E-56 T 12-10-2018 M892_05950 30db4e598d869adc2ce98ef16e26914e 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 702 721 1.8E-56 T 12-10-2018 M892_05950 30db4e598d869adc2ce98ef16e26914e 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 355 374 1.8E-56 T 12-10-2018 M892_05950 30db4e598d869adc2ce98ef16e26914e 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 672 691 1.8E-56 T 12-10-2018 M892_05950 30db4e598d869adc2ce98ef16e26914e 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 725 743 1.8E-56 T 12-10-2018 M892_05950 30db4e598d869adc2ce98ef16e26914e 783 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 569 771 2.9E-99 T 12-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 M892_05950 30db4e598d869adc2ce98ef16e26914e 783 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 196 2.0E-40 T 12-10-2018 IPR003111 Lon, substrate-binding domain M892_23155 99213b77c0d323d0690d5c912fc2ef08 144 TIGRFAM TIGR01068 thioredoxin: thioredoxin 49 141 3.4E-35 T 12-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 M892_23155 99213b77c0d323d0690d5c912fc2ef08 144 SUPERFAMILY SSF52833 27 143 6.18E-37 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M892_23155 99213b77c0d323d0690d5c912fc2ef08 144 Gene3D G3DSA:2.20.28.140 2 37 1.7E-13 T 12-10-2018 M892_23155 99213b77c0d323d0690d5c912fc2ef08 144 Pfam PF00085 Thioredoxin 46 140 3.6E-28 T 12-10-2018 IPR013766 Thioredoxin domain GO:0045454 M892_23155 99213b77c0d323d0690d5c912fc2ef08 144 Gene3D G3DSA:3.40.30.10 41 144 1.2E-32 T 12-10-2018 M892_23155 99213b77c0d323d0690d5c912fc2ef08 144 PIRSF PIRSF000077 40 142 7.1E-33 T 12-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 M892_23155 99213b77c0d323d0690d5c912fc2ef08 144 PIRSF PIRSF000077 25 33 3400.0 T 12-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 M892_23155 99213b77c0d323d0690d5c912fc2ef08 144 PRINTS PR00421 Thioredoxin family signature 106 117 5.0E-8 T 12-10-2018 M892_23155 99213b77c0d323d0690d5c912fc2ef08 144 PRINTS PR00421 Thioredoxin family signature 58 66 5.0E-8 T 12-10-2018 M892_23155 99213b77c0d323d0690d5c912fc2ef08 144 PRINTS PR00421 Thioredoxin family signature 66 75 5.0E-8 T 12-10-2018 M892_14050 ff347c46cb5cfa7920efe1af848d2070 157 SUPERFAMILY SSF46557 2 75 1.7E-24 T 12-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 M892_14050 ff347c46cb5cfa7920efe1af848d2070 157 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 31.616 T 12-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 M892_14050 ff347c46cb5cfa7920efe1af848d2070 157 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 82 156 4.1E-28 T 12-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 M892_14050 ff347c46cb5cfa7920efe1af848d2070 157 Gene3D G3DSA:1.10.287.180 1 74 1.5E-24 T 12-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 M892_14050 ff347c46cb5cfa7920efe1af848d2070 157 Pfam PF03449 Transcription elongation factor, N-terminal 4 73 7.3E-24 T 12-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 M892_14050 ff347c46cb5cfa7920efe1af848d2070 157 Gene3D G3DSA:3.10.50.30 75 157 1.1E-30 T 12-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 M892_14050 ff347c46cb5cfa7920efe1af848d2070 157 SUPERFAMILY SSF54534 81 156 1.57E-24 T 12-10-2018 M892_14050 ff347c46cb5cfa7920efe1af848d2070 157 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 47 - T 12-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 M892_14050 ff347c46cb5cfa7920efe1af848d2070 157 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 155 1.7E-53 T 12-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 M892_14050 ff347c46cb5cfa7920efe1af848d2070 157 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 12-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 M892_14050 ff347c46cb5cfa7920efe1af848d2070 157 PIRSF PIRSF006092 1 157 2.4E-47 T 12-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 M892_06760 fb33a53d95399da070e45ac720096ff9 362 Pfam PF00472 RF-1 domain 218 323 9.9E-39 T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 M892_06760 fb33a53d95399da070e45ac720096ff9 362 SUPERFAMILY SSF75620 12 355 3.66E-137 T 12-10-2018 M892_06760 fb33a53d95399da070e45ac720096ff9 362 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 359 40.988 T 12-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 M892_06760 fb33a53d95399da070e45ac720096ff9 362 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 360 6.8E-171 T 12-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 M892_06760 fb33a53d95399da070e45ac720096ff9 362 Gene3D G3DSA:3.30.160.20 212 293 3.1E-95 T 12-10-2018 M892_06760 fb33a53d95399da070e45ac720096ff9 362 Pfam PF03462 PCRF domain 13 205 1.0E-77 T 12-10-2018 IPR005139 Peptide chain release factor GO:0006415 M892_06760 fb33a53d95399da070e45ac720096ff9 362 SMART SM00937 67 180 1.6E-67 T 12-10-2018 IPR005139 Peptide chain release factor GO:0006415 M892_06760 fb33a53d95399da070e45ac720096ff9 362 Gene3D G3DSA:3.30.70.1660 115 343 3.1E-95 T 12-10-2018 M892_06760 fb33a53d95399da070e45ac720096ff9 362 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 230 246 - T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 M892_06760 fb33a53d95399da070e45ac720096ff9 362 Gene3D G3DSA:1.20.58.410 3 96 1.4E-8 T 12-10-2018 M892_13805 3956123b8007246ebb345e0419771fef 222 Pfam PF00484 Carbonic anhydrase 38 188 1.2E-49 T 12-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 M892_13805 3956123b8007246ebb345e0419771fef 222 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 12-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 M892_13805 3956123b8007246ebb345e0419771fef 222 Gene3D G3DSA:3.40.1050.10 1 222 4.4E-90 T 12-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 M892_13805 3956123b8007246ebb345e0419771fef 222 SUPERFAMILY SSF53056 2 213 4.06E-74 T 12-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 M892_13805 3956123b8007246ebb345e0419771fef 222 SMART SM00947 30 192 2.3E-66 T 12-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 M892_13805 3956123b8007246ebb345e0419771fef 222 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 12-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 M892_21385 c7253e545de6232e2bfacb9ed59b72d7 446 SMART SM00388 229 291 8.7E-10 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M892_21385 c7253e545de6232e2bfacb9ed59b72d7 446 Pfam PF00672 HAMP domain 173 222 3.5E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M892_21385 c7253e545de6232e2bfacb9ed59b72d7 446 Gene3D G3DSA:1.10.287.130 177 292 1.7E-24 T 12-10-2018 M892_21385 c7253e545de6232e2bfacb9ed59b72d7 446 SUPERFAMILY SSF55874 281 444 3.93E-31 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_21385 c7253e545de6232e2bfacb9ed59b72d7 446 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 337 444 1.4E-14 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_21385 c7253e545de6232e2bfacb9ed59b72d7 446 Pfam PF00512 His Kinase A (phospho-acceptor) domain 231 290 2.1E-10 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M892_21385 c7253e545de6232e2bfacb9ed59b72d7 446 SUPERFAMILY SSF158472 173 225 4.45E-7 T 12-10-2018 M892_21385 c7253e545de6232e2bfacb9ed59b72d7 446 Pfam PF16750 Sensor domain of 2-component histidine kinase 37 144 3.5E-28 T 12-10-2018 IPR031930 2-component histidine kinase, sensor domain M892_21385 c7253e545de6232e2bfacb9ed59b72d7 446 Gene3D G3DSA:3.30.450.170 26 145 1.4E-26 T 12-10-2018 IPR038428 2-component histidine kinase, sensor domain superfamily M892_21385 c7253e545de6232e2bfacb9ed59b72d7 446 SMART SM00304 173 228 4.3E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M892_21385 c7253e545de6232e2bfacb9ed59b72d7 446 Gene3D G3DSA:3.30.565.10 295 444 4.6E-27 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_21385 c7253e545de6232e2bfacb9ed59b72d7 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 406 424 5.7E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_21385 c7253e545de6232e2bfacb9ed59b72d7 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 400 5.7E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_21385 c7253e545de6232e2bfacb9ed59b72d7 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 386 5.7E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_21385 c7253e545de6232e2bfacb9ed59b72d7 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 430 443 5.7E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_21385 c7253e545de6232e2bfacb9ed59b72d7 446 SMART SM00387 335 446 1.5E-22 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_21385 c7253e545de6232e2bfacb9ed59b72d7 446 SUPERFAMILY SSF47384 213 291 1.59E-11 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M892_15545 73829884accb200b24cb4e69ef595d32 264 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 2 238 9.6E-74 T 12-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 M892_15545 73829884accb200b24cb4e69ef595d32 264 PIRSF PIRSF001430 1 251 4.3E-76 T 12-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 M892_15545 73829884accb200b24cb4e69ef595d32 264 Gene3D G3DSA:3.30.70.660 105 242 2.7E-49 T 12-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 M892_15545 73829884accb200b24cb4e69ef595d32 264 SUPERFAMILY SSF55120 1 256 4.89E-93 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 M892_15545 73829884accb200b24cb4e69ef595d32 264 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 243 34.365 T 12-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 M892_15545 73829884accb200b24cb4e69ef595d32 264 Pfam PF01416 tRNA pseudouridine synthase 144 244 1.2E-29 T 12-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 M892_15545 73829884accb200b24cb4e69ef595d32 264 Pfam PF01416 tRNA pseudouridine synthase 8 102 2.0E-9 T 12-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 M892_15545 73829884accb200b24cb4e69ef595d32 264 Gene3D G3DSA:3.30.70.580 1 104 3.6E-39 T 12-10-2018 M892_24190 e9153784bc68e022d27824c848128561 244 SUPERFAMILY SSF55781 87 240 6.15E-32 T 12-10-2018 M892_24190 e9153784bc68e022d27824c848128561 244 Gene3D G3DSA:3.30.450.40 80 240 2.9E-59 T 12-10-2018 IPR029016 GAF-like domain superfamily M892_24190 e9153784bc68e022d27824c848128561 244 Gene3D G3DSA:1.10.10.10 9 79 1.5E-9 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_24190 e9153784bc68e022d27824c848128561 244 Pfam PF01614 Bacterial transcriptional regulator 130 238 3.4E-14 T 12-10-2018 IPR014757 Transcription regulator IclR, C-terminal M892_24190 e9153784bc68e022d27824c848128561 244 SUPERFAMILY SSF46785 11 77 1.87E-8 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_24190 e9153784bc68e022d27824c848128561 244 Pfam PF08279 HTH domain 16 56 4.6E-5 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 M892_13330 041a6bef3855dbc9625995bd1b6e8ead 409 SUPERFAMILY SSF51735 108 295 1.69E-58 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_13330 041a6bef3855dbc9625995bd1b6e8ead 409 SUPERFAMILY SSF55021 334 408 5.34E-17 T 12-10-2018 M892_13330 041a6bef3855dbc9625995bd1b6e8ead 409 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 118 294 1.6E-53 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 M892_13330 041a6bef3855dbc9625995bd1b6e8ead 409 Gene3D G3DSA:3.40.50.720 109 297 2.0E-110 T 12-10-2018 M892_13330 041a6bef3855dbc9625995bd1b6e8ead 409 Gene3D G3DSA:3.30.70.260 328 408 1.2E-32 T 12-10-2018 M892_13330 041a6bef3855dbc9625995bd1b6e8ead 409 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 13 326 6.2E-39 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 M892_13330 041a6bef3855dbc9625995bd1b6e8ead 409 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site M892_13330 041a6bef3855dbc9625995bd1b6e8ead 409 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 12-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 M892_13330 041a6bef3855dbc9625995bd1b6e8ead 409 SUPERFAMILY SSF52283 7 137 1.59E-49 T 12-10-2018 M892_13330 041a6bef3855dbc9625995bd1b6e8ead 409 Gene3D G3DSA:3.40.50.720 14 312 2.0E-110 T 12-10-2018 M892_13330 041a6bef3855dbc9625995bd1b6e8ead 409 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site M892_18705 c4945d612f67af1a8368aede6907f2c9 690 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 56 689 2.9E-93 T 12-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 M892_18705 c4945d612f67af1a8368aede6907f2c9 690 Pfam PF00593 TonB dependent receptor 241 689 4.8E-52 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel M892_18705 c4945d612f67af1a8368aede6907f2c9 690 SUPERFAMILY SSF56935 18 690 2.14E-119 T 12-10-2018 M892_18705 c4945d612f67af1a8368aede6907f2c9 690 Gene3D G3DSA:2.40.170.20 163 690 1.9E-104 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily M892_18705 c4945d612f67af1a8368aede6907f2c9 690 Pfam PF07715 TonB-dependent Receptor Plug Domain 54 151 5.2E-17 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain M892_18705 c4945d612f67af1a8368aede6907f2c9 690 Gene3D G3DSA:2.170.130.10 36 162 5.2E-30 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily M892_21160 3be62c04e697adc98332c7f90d992d86 1225 SUPERFAMILY SSF47384 679 758 2.55E-18 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M892_21160 3be62c04e697adc98332c7f90d992d86 1225 Gene3D G3DSA:3.40.190.10 297 509 1.8E-13 T 12-10-2018 M892_21160 3be62c04e697adc98332c7f90d992d86 1225 Gene3D G3DSA:3.30.565.10 758 916 7.3E-44 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_21160 3be62c04e697adc98332c7f90d992d86 1225 Pfam PF00072 Response regulator receiver domain 994 1110 2.0E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_21160 3be62c04e697adc98332c7f90d992d86 1225 SUPERFAMILY SSF53850 63 267 4.07E-21 T 12-10-2018 M892_21160 3be62c04e697adc98332c7f90d992d86 1225 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 808 912 2.9E-29 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_21160 3be62c04e697adc98332c7f90d992d86 1225 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 83 267 7.6E-20 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M892_21160 3be62c04e697adc98332c7f90d992d86 1225 Pfam PF01627 Hpt domain 1157 1218 6.3E-7 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 M892_21160 3be62c04e697adc98332c7f90d992d86 1225 SMART SM00062 62 281 6.9E-4 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M892_21160 3be62c04e697adc98332c7f90d992d86 1225 SMART SM00388 692 757 9.6E-19 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M892_21160 3be62c04e697adc98332c7f90d992d86 1225 Gene3D G3DSA:1.20.120.160 1125 1222 1.8E-5 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 M892_21160 3be62c04e697adc98332c7f90d992d86 1225 SUPERFAMILY SSF55874 746 915 1.44E-43 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_21160 3be62c04e697adc98332c7f90d992d86 1225 Pfam PF00512 His Kinase A (phospho-acceptor) domain 693 756 4.8E-18 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M892_21160 3be62c04e697adc98332c7f90d992d86 1225 Gene3D G3DSA:1.10.287.130 664 755 6.8E-21 T 12-10-2018 M892_21160 3be62c04e697adc98332c7f90d992d86 1225 PRINTS PR00344 Bacterial sensor protein C-terminal signature 858 868 1.4E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_21160 3be62c04e697adc98332c7f90d992d86 1225 PRINTS PR00344 Bacterial sensor protein C-terminal signature 875 893 1.4E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_21160 3be62c04e697adc98332c7f90d992d86 1225 PRINTS PR00344 Bacterial sensor protein C-terminal signature 899 912 1.4E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_21160 3be62c04e697adc98332c7f90d992d86 1225 PRINTS PR00344 Bacterial sensor protein C-terminal signature 840 854 1.4E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_21160 3be62c04e697adc98332c7f90d992d86 1225 Gene3D G3DSA:3.40.190.10 384 471 1.8E-13 T 12-10-2018 M892_21160 3be62c04e697adc98332c7f90d992d86 1225 Gene3D G3DSA:3.40.190.10 147 239 8.9E-25 T 12-10-2018 M892_21160 3be62c04e697adc98332c7f90d992d86 1225 Gene3D G3DSA:3.40.190.10 55 271 8.9E-25 T 12-10-2018 M892_21160 3be62c04e697adc98332c7f90d992d86 1225 SMART SM00387 804 915 1.4E-37 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_21160 3be62c04e697adc98332c7f90d992d86 1225 Gene3D G3DSA:3.40.50.2300 989 1124 3.9E-33 T 12-10-2018 M892_21160 3be62c04e697adc98332c7f90d992d86 1225 SUPERFAMILY SSF52172 992 1124 3.98E-32 T 12-10-2018 IPR011006 CheY-like superfamily M892_21160 3be62c04e697adc98332c7f90d992d86 1225 SUPERFAMILY SSF53850 290 511 8.69E-13 T 12-10-2018 M892_21160 3be62c04e697adc98332c7f90d992d86 1225 SUPERFAMILY SSF47226 1121 1220 1.31E-10 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 M892_21160 3be62c04e697adc98332c7f90d992d86 1225 SMART SM00448 992 1112 8.8E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_21230 ac23c8ff10415e766cda0a04f497395e 114 ProSitePatterns PS00893 Nudix box signature. 7 28 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 M892_21230 ac23c8ff10415e766cda0a04f497395e 114 Gene3D G3DSA:3.90.79.10 1 93 1.8E-14 T 12-10-2018 M892_21230 ac23c8ff10415e766cda0a04f497395e 114 SUPERFAMILY SSF55811 2 78 2.84E-15 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 M892_21230 ac23c8ff10415e766cda0a04f497395e 114 Pfam PF00293 NUDIX domain 4 78 2.4E-8 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 M892_13435 c0f2e6ba000dc4877047c260dea71f87 243 Pfam PF02565 Recombination protein O C terminal 90 230 2.7E-24 T 12-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 M892_13435 c0f2e6ba000dc4877047c260dea71f87 243 Hamap MF_00201 DNA repair protein RecO [recO]. 6 235 22.927 T 12-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 M892_13435 c0f2e6ba000dc4877047c260dea71f87 243 TIGRFAM TIGR00613 reco: DNA repair protein RecO 11 234 3.1E-42 T 12-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 M892_13435 c0f2e6ba000dc4877047c260dea71f87 243 SUPERFAMILY SSF57863 91 170 1.67E-11 T 12-10-2018 IPR037278 ARFGAP/RecO-like zinc finger M892_13435 c0f2e6ba000dc4877047c260dea71f87 243 Gene3D G3DSA:1.20.1440.120 84 242 1.1E-52 T 12-10-2018 M892_13435 c0f2e6ba000dc4877047c260dea71f87 243 SUPERFAMILY SSF50249 10 80 5.82E-16 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M892_13435 c0f2e6ba000dc4877047c260dea71f87 243 Pfam PF11967 Recombination protein O N terminal 11 81 2.4E-24 T 12-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal M892_13435 c0f2e6ba000dc4877047c260dea71f87 243 Gene3D G3DSA:2.40.50.140 6 83 4.1E-34 T 12-10-2018 M892_07130 741a273de46ab5ddb22bf149a22ade97 379 PIRSF PIRSF000729 9 378 9.5E-138 T 12-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 M892_07130 741a273de46ab5ddb22bf149a22ade97 379 Hamap MF_00456 Glutamate 5-kinase [proB]. 14 268 35.87 T 12-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 M892_07130 741a273de46ab5ddb22bf149a22ade97 379 ProSitePatterns PS00902 Glutamate 5-kinase signature. 216 233 - T 12-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 M892_07130 741a273de46ab5ddb22bf149a22ade97 379 Gene3D G3DSA:3.40.1160.10 5 274 4.2E-87 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily M892_07130 741a273de46ab5ddb22bf149a22ade97 379 Pfam PF01472 PUA domain 286 360 2.8E-23 T 12-10-2018 IPR002478 PUA domain GO:0003723 M892_07130 741a273de46ab5ddb22bf149a22ade97 379 SUPERFAMILY SSF53633 15 265 3.67E-65 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily M892_07130 741a273de46ab5ddb22bf149a22ade97 379 SMART SM00359 286 369 3.0E-19 T 12-10-2018 IPR002478 PUA domain GO:0003723 M892_07130 741a273de46ab5ddb22bf149a22ade97 379 Pfam PF00696 Amino acid kinase family 15 243 1.3E-41 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 M892_07130 741a273de46ab5ddb22bf149a22ade97 379 TIGRFAM TIGR01027 proB: glutamate 5-kinase 14 375 6.1E-148 T 12-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 M892_07130 741a273de46ab5ddb22bf149a22ade97 379 PRINTS PR00474 Glutamate 5-kinase family signature 85 113 1.3E-53 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 M892_07130 741a273de46ab5ddb22bf149a22ade97 379 PRINTS PR00474 Glutamate 5-kinase family signature 218 238 1.3E-53 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 M892_07130 741a273de46ab5ddb22bf149a22ade97 379 PRINTS PR00474 Glutamate 5-kinase family signature 125 146 1.3E-53 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 M892_07130 741a273de46ab5ddb22bf149a22ade97 379 PRINTS PR00474 Glutamate 5-kinase family signature 157 184 1.3E-53 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 M892_07130 741a273de46ab5ddb22bf149a22ade97 379 PRINTS PR00474 Glutamate 5-kinase family signature 51 65 1.3E-53 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 M892_07130 741a273de46ab5ddb22bf149a22ade97 379 Gene3D G3DSA:2.30.130.10 275 377 8.3E-32 T 12-10-2018 IPR036974 PUA domain superfamily GO:0003723 M892_07130 741a273de46ab5ddb22bf149a22ade97 379 SUPERFAMILY SSF88697 286 376 5.19E-25 T 12-10-2018 IPR015947 PUA-like superfamily M892_09695 b0067a669c0c8583ff68617db101ac8a 706 SUPERFAMILY SSF55021 631 703 6.66E-7 T 12-10-2018 M892_09695 b0067a669c0c8583ff68617db101ac8a 706 Gene3D G3DSA:3.10.20.30 382 456 4.6E-29 T 12-10-2018 IPR012675 Beta-grasp domain superfamily M892_09695 b0067a669c0c8583ff68617db101ac8a 706 Pfam PF13328 HD domain 28 175 5.9E-54 T 12-10-2018 IPR003607 HD/PDEase domain M892_09695 b0067a669c0c8583ff68617db101ac8a 706 Pfam PF13291 ACT domain 627 703 4.4E-14 T 12-10-2018 IPR002912 ACT domain M892_09695 b0067a669c0c8583ff68617db101ac8a 706 Pfam PF04607 Region found in RelA / SpoT proteins 235 345 9.3E-35 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 M892_09695 b0067a669c0c8583ff68617db101ac8a 706 Gene3D G3DSA:3.30.460.10 193 325 2.5E-46 T 12-10-2018 M892_09695 b0067a669c0c8583ff68617db101ac8a 706 SUPERFAMILY SSF109604 3 190 2.54E-75 T 12-10-2018 M892_09695 b0067a669c0c8583ff68617db101ac8a 706 SMART SM00471 41 153 4.3E-11 T 12-10-2018 IPR003607 HD/PDEase domain M892_09695 b0067a669c0c8583ff68617db101ac8a 706 Gene3D G3DSA:3.30.70.260 627 706 1.4E-12 T 12-10-2018 M892_09695 b0067a669c0c8583ff68617db101ac8a 706 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 27 702 2.0E-270 T 12-10-2018 IPR004811 RelA/SpoT family GO:0015969 M892_09695 b0067a669c0c8583ff68617db101ac8a 706 SUPERFAMILY SSF81271 376 448 1.85E-20 T 12-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 M892_09695 b0067a669c0c8583ff68617db101ac8a 706 SMART SM00954 235 345 6.9E-59 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 M892_09695 b0067a669c0c8583ff68617db101ac8a 706 SUPERFAMILY SSF81301 180 393 2.78E-59 T 12-10-2018 M892_09695 b0067a669c0c8583ff68617db101ac8a 706 Pfam PF02824 TGS domain 389 447 4.9E-19 T 12-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 M892_09695 b0067a669c0c8583ff68617db101ac8a 706 Gene3D G3DSA:1.10.3210.10 3 190 2.7E-80 T 12-10-2018 M892_02395 07d23bc29f6765bf9ecb180298ca26ce 249 SUPERFAMILY SSF82861 22 106 1.7E-17 T 12-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 M892_02395 07d23bc29f6765bf9ecb180298ca26ce 249 Gene3D G3DSA:2.30.30.60 123 172 2.1E-19 T 12-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily M892_02395 07d23bc29f6765bf9ecb180298ca26ce 249 SUPERFAMILY SSF50182 108 172 7.52E-18 T 12-10-2018 IPR010920 LSM domain superfamily M892_02395 07d23bc29f6765bf9ecb180298ca26ce 249 Pfam PF00924 Mechanosensitive ion channel 67 243 7.2E-46 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 M892_02395 07d23bc29f6765bf9ecb180298ca26ce 249 SUPERFAMILY SSF82689 176 248 1.83E-16 T 12-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 M892_02395 07d23bc29f6765bf9ecb180298ca26ce 249 Pfam PF05552 Conserved TM helix 15 56 3.2E-10 T 12-10-2018 IPR008910 Conserved TM helix M892_02395 07d23bc29f6765bf9ecb180298ca26ce 249 Gene3D G3DSA:3.30.70.100 174 249 1.3E-14 T 12-10-2018 M892_09790 76689008ac995de3cb4d73996d2880c2 400 Gene3D G3DSA:3.30.1360.100 314 400 1.1E-31 T 12-10-2018 M892_09790 76689008ac995de3cb4d73996d2880c2 400 Gene3D G3DSA:3.30.420.380 3 234 4.3E-87 T 12-10-2018 M892_09790 76689008ac995de3cb4d73996d2880c2 400 Pfam PF12693 GspL periplasmic domain 241 399 6.2E-53 T 12-10-2018 IPR025691 GspL periplasmic domain M892_09790 76689008ac995de3cb4d73996d2880c2 400 PIRSF PIRSF015761 4 400 9.4E-38 T 12-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 M892_09790 76689008ac995de3cb4d73996d2880c2 400 TIGRFAM TIGR01709 typeII_sec_gspL: type II secretion system protein L 5 398 4.6E-95 T 12-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 M892_09790 76689008ac995de3cb4d73996d2880c2 400 SUPERFAMILY SSF53067 146 235 1.1E-23 T 12-10-2018 M892_09790 76689008ac995de3cb4d73996d2880c2 400 Pfam PF05134 Type II secretion system (T2SS), protein L 5 237 5.9E-81 T 12-10-2018 IPR024230 GspL, cytoplasmic actin-ATPase-like domain M892_09790 76689008ac995de3cb4d73996d2880c2 400 SUPERFAMILY SSF53067 2 144 1.17E-40 T 12-10-2018 M892_09790 76689008ac995de3cb4d73996d2880c2 400 Gene3D G3DSA:3.30.420.370 142 212 4.3E-87 T 12-10-2018 M892_06735 5449d2eea92dafc313538b9b179329c6 553 ProSitePatterns PS00786 5'-nucleotidase signature 2. 113 124 - T 12-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M892_06735 5449d2eea92dafc313538b9b179329c6 553 Gene3D G3DSA:3.60.21.10 30 365 3.6E-127 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like M892_06735 5449d2eea92dafc313538b9b179329c6 553 ProSitePatterns PS00785 5'-nucleotidase signature 1. 38 50 - T 12-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M892_06735 5449d2eea92dafc313538b9b179329c6 553 SUPERFAMILY SSF55816 366 542 6.41E-52 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M892_06735 5449d2eea92dafc313538b9b179329c6 553 SUPERFAMILY SSF56300 32 364 7.99E-97 T 12-10-2018 M892_06735 5449d2eea92dafc313538b9b179329c6 553 Gene3D G3DSA:3.90.780.10 366 552 8.4E-59 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M892_06735 5449d2eea92dafc313538b9b179329c6 553 Pfam PF02872 5'-nucleotidase, C-terminal domain 367 512 2.8E-35 T 12-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M892_06735 5449d2eea92dafc313538b9b179329c6 553 PRINTS PR01607 Apyrase family signature 36 54 8.4E-52 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M892_06735 5449d2eea92dafc313538b9b179329c6 553 PRINTS PR01607 Apyrase family signature 242 265 8.4E-52 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M892_06735 5449d2eea92dafc313538b9b179329c6 553 PRINTS PR01607 Apyrase family signature 287 307 8.4E-52 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M892_06735 5449d2eea92dafc313538b9b179329c6 553 PRINTS PR01607 Apyrase family signature 487 506 8.4E-52 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M892_06735 5449d2eea92dafc313538b9b179329c6 553 PRINTS PR01607 Apyrase family signature 211 228 8.4E-52 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M892_06735 5449d2eea92dafc313538b9b179329c6 553 PRINTS PR01607 Apyrase family signature 420 443 8.4E-52 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M892_06735 5449d2eea92dafc313538b9b179329c6 553 Pfam PF00149 Calcineurin-like phosphoesterase 38 259 2.8E-22 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 M892_09730 15d352fda0c196367f7c02e075566402 239 SMART SM00862 156 232 1.3E-21 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M892_09730 15d352fda0c196367f7c02e075566402 239 SUPERFAMILY SSF46894 132 234 5.1E-27 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M892_09730 15d352fda0c196367f7c02e075566402 239 Gene3D G3DSA:1.10.10.10 130 239 9.8E-39 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_09730 15d352fda0c196367f7c02e075566402 239 Gene3D G3DSA:3.40.50.2300 1 125 5.2E-40 T 12-10-2018 M892_09730 15d352fda0c196367f7c02e075566402 239 SUPERFAMILY SSF52172 3 126 3.98E-42 T 12-10-2018 IPR011006 CheY-like superfamily M892_09730 15d352fda0c196367f7c02e075566402 239 SMART SM00448 5 116 2.6E-45 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_09730 15d352fda0c196367f7c02e075566402 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 1.3E-22 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M892_09730 15d352fda0c196367f7c02e075566402 239 Pfam PF00072 Response regulator receiver domain 7 117 2.1E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_01125 6a47105bfffcb3307babac04fd15fd0d 633 Pfam PF01841 Transglutaminase-like superfamily 273 344 2.2E-5 T 12-10-2018 IPR002931 Transglutaminase-like M892_01125 6a47105bfffcb3307babac04fd15fd0d 633 SUPERFAMILY SSF54001 269 389 1.31E-8 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily M892_01125 6a47105bfffcb3307babac04fd15fd0d 633 Pfam PF12969 Domain of Unknown Function with PDB structure (DUF3857) 85 208 2.7E-14 T 12-10-2018 IPR024618 Domain of unknown function DUF3857 M892_01125 6a47105bfffcb3307babac04fd15fd0d 633 Gene3D G3DSA:2.60.40.3140 51 226 3.4E-11 T 12-10-2018 M892_01125 6a47105bfffcb3307babac04fd15fd0d 633 Gene3D G3DSA:3.10.620.30 256 404 5.1E-36 T 12-10-2018 M892_26285 28e0ec1721ad3de0c38aef958d9ee418 333 Gene3D G3DSA:2.40.10.10 35 264 3.0E-54 T 12-10-2018 M892_26285 28e0ec1721ad3de0c38aef958d9ee418 333 SMART SM00020 22 263 3.3E-52 T 12-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 M892_26285 28e0ec1721ad3de0c38aef958d9ee418 333 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 119 133 6.6E-13 T 12-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 M892_26285 28e0ec1721ad3de0c38aef958d9ee418 333 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 55 70 6.6E-13 T 12-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 M892_26285 28e0ec1721ad3de0c38aef958d9ee418 333 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 211 223 6.6E-13 T 12-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 M892_26285 28e0ec1721ad3de0c38aef958d9ee418 333 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 65 70 - T 12-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 M892_26285 28e0ec1721ad3de0c38aef958d9ee418 333 Gene3D G3DSA:2.40.10.10 25 257 3.0E-54 T 12-10-2018 M892_26285 28e0ec1721ad3de0c38aef958d9ee418 333 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 212 223 - T 12-10-2018 IPR033116 Serine proteases, trypsin family, serine active site M892_26285 28e0ec1721ad3de0c38aef958d9ee418 333 SUPERFAMILY SSF50494 16 267 1.57E-60 T 12-10-2018 IPR009003 Peptidase S1, PA clan M892_26285 28e0ec1721ad3de0c38aef958d9ee418 333 Pfam PF00089 Trypsin 23 263 3.1E-42 T 12-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 M892_07535 5ab5a947f7484ff7fba67366a8e92317 517 Gene3D G3DSA:3.40.50.880 6 201 5.4E-54 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M892_07535 5ab5a947f7484ff7fba67366a8e92317 517 PRINTS PR00097 Anthranilate synthase component II signature 54 63 3.5E-6 T 12-10-2018 M892_07535 5ab5a947f7484ff7fba67366a8e92317 517 PRINTS PR00097 Anthranilate synthase component II signature 81 92 3.5E-6 T 12-10-2018 M892_07535 5ab5a947f7484ff7fba67366a8e92317 517 PRINTS PR00097 Anthranilate synthase component II signature 169 182 3.5E-6 T 12-10-2018 M892_07535 5ab5a947f7484ff7fba67366a8e92317 517 Pfam PF00958 GMP synthase C terminal domain 425 516 1.5E-43 T 12-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 M892_07535 5ab5a947f7484ff7fba67366a8e92317 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 2.8E-7 T 12-10-2018 M892_07535 5ab5a947f7484ff7fba67366a8e92317 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 2.8E-7 T 12-10-2018 M892_07535 5ab5a947f7484ff7fba67366a8e92317 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 2.8E-7 T 12-10-2018 M892_07535 5ab5a947f7484ff7fba67366a8e92317 517 Pfam PF00117 Glutamine amidotransferase class-I 12 191 7.1E-42 T 12-10-2018 IPR017926 Glutamine amidotransferase M892_07535 5ab5a947f7484ff7fba67366a8e92317 517 SUPERFAMILY SSF52317 9 200 8.1E-57 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M892_07535 5ab5a947f7484ff7fba67366a8e92317 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 4.0E-6 T 12-10-2018 M892_07535 5ab5a947f7484ff7fba67366a8e92317 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 4.0E-6 T 12-10-2018 M892_07535 5ab5a947f7484ff7fba67366a8e92317 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 4.0E-6 T 12-10-2018 M892_07535 5ab5a947f7484ff7fba67366a8e92317 517 SUPERFAMILY SSF54810 397 517 5.75E-51 T 12-10-2018 M892_07535 5ab5a947f7484ff7fba67366a8e92317 517 Gene3D G3DSA:3.30.300.10 398 517 1.0E-50 T 12-10-2018 M892_07535 5ab5a947f7484ff7fba67366a8e92317 517 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 517 56.425 T 12-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 M892_07535 5ab5a947f7484ff7fba67366a8e92317 517 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 197 1.2E-83 T 12-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 M892_07535 5ab5a947f7484ff7fba67366a8e92317 517 Pfam PF02540 NAD synthase 212 286 9.1E-8 T 12-10-2018 IPR022310 NAD/GMP synthase M892_07535 5ab5a947f7484ff7fba67366a8e92317 517 Gene3D G3DSA:3.40.50.620 202 397 5.3E-75 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M892_07535 5ab5a947f7484ff7fba67366a8e92317 517 SUPERFAMILY SSF52402 189 412 7.72E-58 T 12-10-2018 M892_07535 5ab5a947f7484ff7fba67366a8e92317 517 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 205 517 6.0E-156 T 12-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 M892_15870 aedd277c56bfb8433fcac82faf7ec8f6 453 Pfam PF01609 Transposase DDE domain 145 368 1.0E-18 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_15870 aedd277c56bfb8433fcac82faf7ec8f6 453 SUPERFAMILY SSF53098 118 380 1.82E-22 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_15870 aedd277c56bfb8433fcac82faf7ec8f6 453 Pfam PF13006 Insertion element 4 transposase N-terminal 35 125 9.7E-21 T 12-10-2018 IPR024473 Transposase, IS4, N-terminal M892_22235 aedd277c56bfb8433fcac82faf7ec8f6 453 Pfam PF01609 Transposase DDE domain 145 368 1.0E-18 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_22235 aedd277c56bfb8433fcac82faf7ec8f6 453 SUPERFAMILY SSF53098 118 380 1.82E-22 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_22235 aedd277c56bfb8433fcac82faf7ec8f6 453 Pfam PF13006 Insertion element 4 transposase N-terminal 35 125 9.7E-21 T 12-10-2018 IPR024473 Transposase, IS4, N-terminal M892_24210 aedd277c56bfb8433fcac82faf7ec8f6 453 Pfam PF01609 Transposase DDE domain 145 368 1.0E-18 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_24210 aedd277c56bfb8433fcac82faf7ec8f6 453 SUPERFAMILY SSF53098 118 380 1.82E-22 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_24210 aedd277c56bfb8433fcac82faf7ec8f6 453 Pfam PF13006 Insertion element 4 transposase N-terminal 35 125 9.7E-21 T 12-10-2018 IPR024473 Transposase, IS4, N-terminal M892_12550 aedd277c56bfb8433fcac82faf7ec8f6 453 Pfam PF01609 Transposase DDE domain 145 368 1.0E-18 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_12550 aedd277c56bfb8433fcac82faf7ec8f6 453 SUPERFAMILY SSF53098 118 380 1.82E-22 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_12550 aedd277c56bfb8433fcac82faf7ec8f6 453 Pfam PF13006 Insertion element 4 transposase N-terminal 35 125 9.7E-21 T 12-10-2018 IPR024473 Transposase, IS4, N-terminal M892_08230 aedd277c56bfb8433fcac82faf7ec8f6 453 Pfam PF01609 Transposase DDE domain 145 368 1.0E-18 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_08230 aedd277c56bfb8433fcac82faf7ec8f6 453 SUPERFAMILY SSF53098 118 380 1.82E-22 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_08230 aedd277c56bfb8433fcac82faf7ec8f6 453 Pfam PF13006 Insertion element 4 transposase N-terminal 35 125 9.7E-21 T 12-10-2018 IPR024473 Transposase, IS4, N-terminal M892_21980 aedd277c56bfb8433fcac82faf7ec8f6 453 Pfam PF01609 Transposase DDE domain 145 368 1.0E-18 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_21980 aedd277c56bfb8433fcac82faf7ec8f6 453 SUPERFAMILY SSF53098 118 380 1.82E-22 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_21980 aedd277c56bfb8433fcac82faf7ec8f6 453 Pfam PF13006 Insertion element 4 transposase N-terminal 35 125 9.7E-21 T 12-10-2018 IPR024473 Transposase, IS4, N-terminal M892_06010 ffef94dd185a70095fa74dffcf599666 220 Pfam PF02254 TrkA-N domain 8 123 8.1E-28 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 M892_06010 ffef94dd185a70095fa74dffcf599666 220 SUPERFAMILY SSF51735 6 136 1.84E-34 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_06010 ffef94dd185a70095fa74dffcf599666 220 Pfam PF02080 TrkA-C domain 154 215 2.9E-8 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 M892_06010 ffef94dd185a70095fa74dffcf599666 220 Gene3D G3DSA:3.30.70.1450 141 216 5.7E-14 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 M892_06010 ffef94dd185a70095fa74dffcf599666 220 SUPERFAMILY SSF116726 134 215 1.31E-14 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 M892_06010 ffef94dd185a70095fa74dffcf599666 220 Gene3D G3DSA:3.40.50.720 2 140 2.0E-34 T 12-10-2018 M892_22455 927693563dbb1d4c28c31ac551443997 149 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 15 132 2.9E-30 T 12-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN M892_22455 927693563dbb1d4c28c31ac551443997 149 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 11 135 3.4E-38 T 12-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN M892_22455 927693563dbb1d4c28c31ac551443997 149 Gene3D G3DSA:2.60.40.4150 12 147 1.6E-31 T 12-10-2018 IPR038706 Type VI secretion protein SciN-like superfamily M892_16200 ced3ed0c74ae65a931a38cfd18cf1607 301 Hamap MF_00973 Gluconeogenesis factor. 5 296 30.394 T 12-10-2018 IPR010119 Gluconeogenesis factor M892_16200 ced3ed0c74ae65a931a38cfd18cf1607 301 Pfam PF01933 Uncharacterised protein family UPF0052 9 283 2.5E-75 T 12-10-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 M892_16200 ced3ed0c74ae65a931a38cfd18cf1607 301 Gene3D G3DSA:3.40.50.12300 4 299 7.9E-80 T 12-10-2018 IPR038136 Gluconeogenesis factor superfamily M892_16200 ced3ed0c74ae65a931a38cfd18cf1607 301 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 9 275 1.4E-102 T 12-10-2018 IPR010119 Gluconeogenesis factor M892_16200 ced3ed0c74ae65a931a38cfd18cf1607 301 SUPERFAMILY SSF142338 6 290 2.49E-82 T 12-10-2018 M892_21900 689f41ba1bffc2ba1582ed6a26dec26f 852 SUPERFAMILY SSF49373 466 551 1.36E-8 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments M892_21900 689f41ba1bffc2ba1582ed6a26dec26f 852 Gene3D G3DSA:2.60.40.10 459 549 6.1E-7 T 12-10-2018 IPR013783 Immunoglobulin-like fold M892_21900 689f41ba1bffc2ba1582ed6a26dec26f 852 Gene3D G3DSA:2.60.40.10 550 660 3.3E-9 T 12-10-2018 IPR013783 Immunoglobulin-like fold M892_21900 689f41ba1bffc2ba1582ed6a26dec26f 852 Pfam PF05689 Salmonella repeat of unknown function (DUF823) 344 450 9.2E-6 T 12-10-2018 IPR008541 Protein of unknown function DUF823 M892_21900 689f41ba1bffc2ba1582ed6a26dec26f 852 SUPERFAMILY SSF49373 556 647 1.78E-9 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments M892_01185 84af27240b2f73d176a86c5f0cf60a96 530 Pfam PF00082 Subtilase family 167 393 2.1E-36 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 M892_01185 84af27240b2f73d176a86c5f0cf60a96 530 SUPERFAMILY SSF89260 433 520 2.22E-5 T 12-10-2018 M892_01185 84af27240b2f73d176a86c5f0cf60a96 530 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 450 515 1.5E-13 T 12-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial M892_01185 84af27240b2f73d176a86c5f0cf60a96 530 Gene3D G3DSA:3.40.50.200 140 423 1.9E-101 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 M892_01185 84af27240b2f73d176a86c5f0cf60a96 530 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 357 367 - T 12-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site M892_01185 84af27240b2f73d176a86c5f0cf60a96 530 SUPERFAMILY SSF52743 145 395 1.03E-80 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 M892_01185 84af27240b2f73d176a86c5f0cf60a96 530 Gene3D G3DSA:3.30.70.80 46 129 1.4E-12 T 12-10-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 M892_01185 84af27240b2f73d176a86c5f0cf60a96 530 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 209 219 - T 12-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site M892_01185 84af27240b2f73d176a86c5f0cf60a96 530 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 172 183 - T 12-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site M892_01185 84af27240b2f73d176a86c5f0cf60a96 530 PRINTS PR00723 Subtilisin serine protease family (S8) signature 205 218 6.3E-20 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related M892_01185 84af27240b2f73d176a86c5f0cf60a96 530 PRINTS PR00723 Subtilisin serine protease family (S8) signature 167 186 6.3E-20 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related M892_01185 84af27240b2f73d176a86c5f0cf60a96 530 PRINTS PR00723 Subtilisin serine protease family (S8) signature 356 372 6.3E-20 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related M892_01185 84af27240b2f73d176a86c5f0cf60a96 530 SUPERFAMILY SSF54897 52 129 1.98E-11 T 12-10-2018 M892_01185 84af27240b2f73d176a86c5f0cf60a96 530 Gene3D G3DSA:2.60.120.380 431 530 1.2E-37 T 12-10-2018 M892_01185 84af27240b2f73d176a86c5f0cf60a96 530 Pfam PF05922 Peptidase inhibitor I9 53 130 1.4E-9 T 12-10-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 M892_07750 6dcb9cab257e82877f9e0030e9d7fc00 734 SUPERFAMILY SSF161098 411 513 1.05E-6 T 12-10-2018 IPR035906 MetI-like superfamily M892_07750 6dcb9cab257e82877f9e0030e9d7fc00 734 SUPERFAMILY SSF50998 68 379 7.22E-5 T 12-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily M892_07750 6dcb9cab257e82877f9e0030e9d7fc00 734 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 452 728 1.7E-12 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M892_07750 6dcb9cab257e82877f9e0030e9d7fc00 734 Gene3D G3DSA:1.10.3720.10 496 731 8.1E-23 T 12-10-2018 IPR035906 MetI-like superfamily M892_07750 6dcb9cab257e82877f9e0030e9d7fc00 734 SUPERFAMILY SSF161098 502 720 5.49E-19 T 12-10-2018 IPR035906 MetI-like superfamily M892_12235 5abdea1e2333307ef0e271868f0a3b0d 210 ProSitePatterns PS00042 Crp-type HTH domain signature. 168 191 - T 12-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 M892_12235 5abdea1e2333307ef0e271868f0a3b0d 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 182 197 5.7E-11 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 M892_12235 5abdea1e2333307ef0e271868f0a3b0d 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 166 182 5.7E-11 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 M892_12235 5abdea1e2333307ef0e271868f0a3b0d 210 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 71 89 - T 12-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site M892_12235 5abdea1e2333307ef0e271868f0a3b0d 210 Gene3D G3DSA:1.10.10.10 139 207 2.0E-35 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_12235 5abdea1e2333307ef0e271868f0a3b0d 210 SUPERFAMILY SSF46785 139 207 2.82E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_12235 5abdea1e2333307ef0e271868f0a3b0d 210 Pfam PF00325 Bacterial regulatory proteins, crp family 166 197 8.8E-16 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 M892_12235 5abdea1e2333307ef0e271868f0a3b0d 210 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 30 46 - T 12-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site M892_12235 5abdea1e2333307ef0e271868f0a3b0d 210 Pfam PF00027 Cyclic nucleotide-binding domain 23 109 7.0E-23 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain M892_12235 5abdea1e2333307ef0e271868f0a3b0d 210 SUPERFAMILY SSF51206 8 137 7.33E-35 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like M892_12235 5abdea1e2333307ef0e271868f0a3b0d 210 Gene3D G3DSA:2.60.120.10 10 138 3.0E-43 T 12-10-2018 IPR014710 RmlC-like jelly roll fold M892_12235 5abdea1e2333307ef0e271868f0a3b0d 210 SMART SM00419 160 208 4.2E-17 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 M892_12235 5abdea1e2333307ef0e271868f0a3b0d 210 SMART SM00100 2 122 3.7E-27 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain M892_14900 1009090860e5157e0af7fdf9f11e0998 243 Gene3D G3DSA:3.40.1160.10 3 243 1.7E-76 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily M892_14900 1009090860e5157e0af7fdf9f11e0998 243 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 44.096 T 12-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 M892_14900 1009090860e5157e0af7fdf9f11e0998 243 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 240 2.9E-102 T 12-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 M892_14900 1009090860e5157e0af7fdf9f11e0998 243 Pfam PF00696 Amino acid kinase family 11 219 4.7E-27 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 M892_14900 1009090860e5157e0af7fdf9f11e0998 243 SUPERFAMILY SSF53633 7 239 8.12E-72 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily M892_14900 1009090860e5157e0af7fdf9f11e0998 243 PIRSF PIRSF005650 4 243 6.4E-90 T 12-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 M892_11395 c2f28873d2b536e710f608abeacd8a79 268 SUPERFAMILY SSF53681 8 108 1.93E-31 T 12-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 M892_11395 c2f28873d2b536e710f608abeacd8a79 268 Gene3D G3DSA:3.40.50.1860 99 208 1.4E-82 T 12-10-2018 M892_11395 c2f28873d2b536e710f608abeacd8a79 268 TIGRFAM TIGR00067 glut_race: glutamate racemase 9 235 1.7E-67 T 12-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 M892_11395 c2f28873d2b536e710f608abeacd8a79 268 SUPERFAMILY SSF53681 113 262 1.66E-32 T 12-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 M892_11395 c2f28873d2b536e710f608abeacd8a79 268 Hamap MF_00258 Glutamate racemase [murI]. 7 256 32.456 T 12-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 M892_11395 c2f28873d2b536e710f608abeacd8a79 268 Gene3D G3DSA:3.40.50.1860 11 237 1.4E-82 T 12-10-2018 M892_11395 c2f28873d2b536e710f608abeacd8a79 268 Pfam PF01177 Asp/Glu/Hydantoin racemase 11 215 8.7E-27 T 12-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 M892_11395 c2f28873d2b536e710f608abeacd8a79 268 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 74 82 - T 12-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 M892_12495 e53a352cd49b88de593c830373281b41 497 SUPERFAMILY SSF52540 13 221 8.24E-10 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_12495 e53a352cd49b88de593c830373281b41 497 Pfam PF05036 Sporulation related domain 410 483 1.4E-7 T 12-10-2018 IPR007730 Sporulation-like domain GO:0042834 M892_12495 e53a352cd49b88de593c830373281b41 497 Pfam PF13401 AAA domain 27 146 6.2E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_12495 e53a352cd49b88de593c830373281b41 497 Gene3D G3DSA:3.40.50.300 9 162 4.9E-7 T 12-10-2018 M892_12495 e53a352cd49b88de593c830373281b41 497 Gene3D G3DSA:3.30.70.1070 398 494 1.3E-24 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 M892_16050 1aa8760cfcb40f6adbbf4b0928a778cc 431 Pfam PF13726 Na+-H+ antiporter family 1 78 1.8E-30 T 12-10-2018 IPR032813 Putative Na+/H+ antiporter, N-terminal M892_16050 1aa8760cfcb40f6adbbf4b0928a778cc 431 Pfam PF03553 Na+/H+ antiporter family 140 425 4.6E-75 T 12-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 M892_16050 1aa8760cfcb40f6adbbf4b0928a778cc 431 PRINTS PR00173 Glutamate-aspartate symporter signature 10 30 1.4E-6 T 12-10-2018 M892_16050 1aa8760cfcb40f6adbbf4b0928a778cc 431 PRINTS PR00173 Glutamate-aspartate symporter signature 364 383 1.4E-6 T 12-10-2018 M892_23455 619c2e77eb65e9d1229222072d15f2b0 470 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 217 224 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 M892_23455 619c2e77eb65e9d1229222072d15f2b0 470 Pfam PF00171 Aldehyde dehydrogenase family 34 440 4.2E-95 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 M892_23455 619c2e77eb65e9d1229222072d15f2b0 470 SUPERFAMILY SSF53720 15 441 1.44E-115 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 M892_23455 619c2e77eb65e9d1229222072d15f2b0 470 Gene3D G3DSA:3.40.605.10 23 440 7.6E-155 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 M892_23455 619c2e77eb65e9d1229222072d15f2b0 470 PIRSF PIRSF036492 2 469 2.3E-158 T 12-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 M892_23455 619c2e77eb65e9d1229222072d15f2b0 470 Gene3D G3DSA:3.40.309.10 221 420 7.6E-155 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 M892_02725 056fda9660b446071eb63febbf354b5d 391 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 12 389 5.0E-191 T 12-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 M892_02725 056fda9660b446071eb63febbf354b5d 391 SUPERFAMILY SSF56059 111 313 2.83E-57 T 12-10-2018 M892_02725 056fda9660b446071eb63febbf354b5d 391 Gene3D G3DSA:3.30.1490.20 121 194 2.3E-34 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 M892_02725 056fda9660b446071eb63febbf354b5d 391 Gene3D G3DSA:3.40.50.20 1 120 1.3E-53 T 12-10-2018 M892_02725 056fda9660b446071eb63febbf354b5d 391 Gene3D G3DSA:3.30.470.20 195 389 5.3E-59 T 12-10-2018 M892_02725 056fda9660b446071eb63febbf354b5d 391 Hamap MF_01643 Formate-dependent phosphoribosylglycinamide formyltransferase [purT]. 6 390 51.696 T 12-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 M892_02725 056fda9660b446071eb63febbf354b5d 391 SUPERFAMILY SSF52440 2 110 1.42E-34 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily M892_02725 056fda9660b446071eb63febbf354b5d 391 SUPERFAMILY SSF51246 317 389 5.96E-17 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 M892_02725 056fda9660b446071eb63febbf354b5d 391 Pfam PF02222 ATP-grasp domain 121 293 4.8E-59 T 12-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type M892_22350 a98751925650e9279e1d2e4912045b3a 1211 PRINTS PR01021 OMPA domain signature 298 313 3.6E-6 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M892_22350 a98751925650e9279e1d2e4912045b3a 1211 PRINTS PR01021 OMPA domain signature 313 329 3.6E-6 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M892_22350 a98751925650e9279e1d2e4912045b3a 1211 SUPERFAMILY SSF103088 258 376 5.49E-20 T 12-10-2018 IPR036737 OmpA-like domain superfamily M892_22350 a98751925650e9279e1d2e4912045b3a 1211 Gene3D G3DSA:3.30.1330.60 231 381 9.4E-21 T 12-10-2018 IPR036737 OmpA-like domain superfamily M892_22350 a98751925650e9279e1d2e4912045b3a 1211 Pfam PF00691 OmpA family 266 370 7.8E-13 T 12-10-2018 IPR006665 OmpA-like domain M892_16855 9c8518bdf55a055e5e8894adfaf51592 399 SUPERFAMILY SSF53098 1 382 1.06E-52 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_16855 9c8518bdf55a055e5e8894adfaf51592 399 Pfam PF01609 Transposase DDE domain 92 327 6.1E-16 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_00100 aa0b3aa7d838b365ab29ed0c2f5b88bc 499 Gene3D G3DSA:3.40.50.2030 237 382 2.0E-61 T 12-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 M892_00100 aa0b3aa7d838b365ab29ed0c2f5b88bc 499 Pfam PF03063 Prismane/CO dehydrogenase family 1 449 1.3E-117 T 12-10-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 M892_00100 aa0b3aa7d838b365ab29ed0c2f5b88bc 499 SUPERFAMILY SSF56821 1 456 1.28E-146 T 12-10-2018 IPR011254 Prismane-like superfamily GO:0003824|GO:0016491|GO:0055114 M892_00100 aa0b3aa7d838b365ab29ed0c2f5b88bc 499 Gene3D G3DSA:1.20.1270.20 153 235 5.6E-27 T 12-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 M892_00100 aa0b3aa7d838b365ab29ed0c2f5b88bc 499 Gene3D G3DSA:3.40.50.2030 383 470 6.9E-19 T 12-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 M892_00100 aa0b3aa7d838b365ab29ed0c2f5b88bc 499 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 1 452 4.6E-167 T 12-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 M892_00100 aa0b3aa7d838b365ab29ed0c2f5b88bc 499 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 435 489 1.1E-5 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 M892_00100 aa0b3aa7d838b365ab29ed0c2f5b88bc 499 SUPERFAMILY SSF54292 450 498 5.78E-13 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 M892_00100 aa0b3aa7d838b365ab29ed0c2f5b88bc 499 Hamap MF_00069 Hydroxylamine reductase [hcp]. 1 499 14.869 T 12-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 M892_00100 aa0b3aa7d838b365ab29ed0c2f5b88bc 499 Gene3D G3DSA:1.20.1270.20 1 143 9.0E-37 T 12-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 M892_08425 86d9188568dd8f0f89429f85e47ec189 287 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 91 102 - T 12-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 M892_08425 86d9188568dd8f0f89429f85e47ec189 287 SUPERFAMILY SSF53790 12 232 4.97E-86 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 M892_08425 86d9188568dd8f0f89429f85e47ec189 287 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 14 284 2.6E-103 T 12-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 M892_08425 86d9188568dd8f0f89429f85e47ec189 287 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 13 213 1.2E-29 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 M892_08425 86d9188568dd8f0f89429f85e47ec189 287 Gene3D G3DSA:3.30.950.10 121 241 6.8E-45 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 M892_08425 86d9188568dd8f0f89429f85e47ec189 287 Gene3D G3DSA:3.40.1010.10 2 120 5.7E-48 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 M892_08425 86d9188568dd8f0f89429f85e47ec189 287 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 13 234 38.707 T 12-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 M892_08425 86d9188568dd8f0f89429f85e47ec189 287 PIRSF PIRSF005917 1 286 4.3E-109 T 12-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 M892_06500 0133d767e66fca4549a54aaadc292572 169 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 23 143 2.5E-50 T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 M892_06500 0133d767e66fca4549a54aaadc292572 169 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 22 146 3.3E-49 T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 M892_06500 0133d767e66fca4549a54aaadc292572 169 SUPERFAMILY SSF51261 18 166 3.84E-55 T 12-10-2018 IPR011055 Duplicated hybrid motif M892_06500 0133d767e66fca4549a54aaadc292572 169 Gene3D G3DSA:2.70.70.10 9 169 5.2E-62 T 12-10-2018 IPR011055 Duplicated hybrid motif M892_06500 0133d767e66fca4549a54aaadc292572 169 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 85 97 - T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 M892_04905 bafe430140c6ea4eadc6dc5afc74f69c 301 SUPERFAMILY SSF46689 1 85 1.18E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_04905 bafe430140c6ea4eadc6dc5afc74f69c 301 Pfam PF13592 Winged helix-turn helix 53 109 3.6E-18 T 12-10-2018 IPR025959 Winged helix-turn helix domain M892_04905 bafe430140c6ea4eadc6dc5afc74f69c 301 Gene3D G3DSA:3.30.420.470 89 296 9.2E-13 T 12-10-2018 M892_04905 bafe430140c6ea4eadc6dc5afc74f69c 301 Pfam PF13358 DDE superfamily endonuclease 123 266 2.6E-35 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_04905 bafe430140c6ea4eadc6dc5afc74f69c 301 SUPERFAMILY SSF53098 177 272 3.19E-7 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_12405 f6451ee339d8692d9683919f0f74db1b 378 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 8 372 8.4E-129 T 12-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 M892_12405 f6451ee339d8692d9683919f0f74db1b 378 SUPERFAMILY SSF55031 177 290 1.47E-22 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain M892_12405 f6451ee339d8692d9683919f0f74db1b 378 Hamap MF_01108 Acetylornithine deacetylase [argE]. 1 378 65.823 T 12-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 M892_12405 f6451ee339d8692d9683919f0f74db1b 378 Gene3D G3DSA:3.40.630.10 28 360 2.7E-79 T 12-10-2018 M892_12405 f6451ee339d8692d9683919f0f74db1b 378 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 106 143 - T 12-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 M892_12405 f6451ee339d8692d9683919f0f74db1b 378 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 71 80 - T 12-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 M892_12405 f6451ee339d8692d9683919f0f74db1b 378 Gene3D G3DSA:3.30.70.360 177 292 2.7E-79 T 12-10-2018 M892_12405 f6451ee339d8692d9683919f0f74db1b 378 Pfam PF01546 Peptidase family M20/M25/M40 72 374 1.7E-32 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 M892_12405 f6451ee339d8692d9683919f0f74db1b 378 SUPERFAMILY SSF53187 3 377 7.14E-58 T 12-10-2018 M892_12405 f6451ee339d8692d9683919f0f74db1b 378 Pfam PF07687 Peptidase dimerisation domain 174 285 5.9E-26 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain M892_20580 35f59475171ddcabc58ad1eec954ebb5 418 Gene3D G3DSA:2.70.70.10 256 386 3.3E-49 T 12-10-2018 IPR011055 Duplicated hybrid motif M892_20580 35f59475171ddcabc58ad1eec954ebb5 418 Gene3D G3DSA:3.10.450.350 57 149 3.3E-34 T 12-10-2018 M892_20580 35f59475171ddcabc58ad1eec954ebb5 418 Pfam PF04225 Opacity-associated protein A LysM-like domain 64 145 2.6E-8 T 12-10-2018 IPR007340 Opacity-associated protein A M892_20580 35f59475171ddcabc58ad1eec954ebb5 418 Pfam PF01551 Peptidase family M23 286 379 7.6E-33 T 12-10-2018 IPR016047 Peptidase M23 M892_20580 35f59475171ddcabc58ad1eec954ebb5 418 Gene3D G3DSA:3.10.450.350 151 255 6.2E-33 T 12-10-2018 M892_20580 35f59475171ddcabc58ad1eec954ebb5 418 SUPERFAMILY SSF51261 134 381 5.75E-68 T 12-10-2018 IPR011055 Duplicated hybrid motif M892_23780 b6adc484754cf251074afb5b22c58799 450 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 213 226 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 M892_23780 b6adc484754cf251074afb5b22c58799 450 SUPERFAMILY SSF53067 1 205 8.74E-24 T 12-10-2018 M892_23780 b6adc484754cf251074afb5b22c58799 450 Gene3D G3DSA:3.90.640.10 336 378 1.5E-11 T 12-10-2018 M892_23780 b6adc484754cf251074afb5b22c58799 450 SUPERFAMILY SSF53067 207 447 2.59E-33 T 12-10-2018 M892_23780 b6adc484754cf251074afb5b22c58799 450 Pfam PF00012 Hsp70 protein 129 259 3.6E-10 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 M892_23780 b6adc484754cf251074afb5b22c58799 450 Gene3D G3DSA:3.30.420.40 379 433 1.5E-11 T 12-10-2018 M892_06685 0455bed116292e15f244171882e0242f 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 355 376 3.2E-48 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 M892_06685 0455bed116292e15f244171882e0242f 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 728 744 3.2E-48 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 M892_06685 0455bed116292e15f244171882e0242f 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 292 312 3.2E-48 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 M892_06685 0455bed116292e15f244171882e0242f 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 746 763 3.2E-48 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 M892_06685 0455bed116292e15f244171882e0242f 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 432 449 3.2E-48 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 M892_06685 0455bed116292e15f244171882e0242f 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 326 343 3.2E-48 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 M892_06685 0455bed116292e15f244171882e0242f 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 526 539 3.2E-48 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 M892_06685 0455bed116292e15f244171882e0242f 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 499 517 3.2E-48 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 M892_06685 0455bed116292e15f244171882e0242f 883 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 211 329 2.6E-13 T 12-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal M892_06685 0455bed116292e15f244171882e0242f 883 Pfam PF03173 Putative carbohydrate binding domain 35 193 3.5E-62 T 12-10-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 M892_06685 0455bed116292e15f244171882e0242f 883 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 332 764 5.0E-109 T 12-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 M892_06685 0455bed116292e15f244171882e0242f 883 SUPERFAMILY SSF55545 208 331 9.27E-24 T 12-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 M892_06685 0455bed116292e15f244171882e0242f 883 SUPERFAMILY SSF81296 781 882 2.1E-37 T 12-10-2018 IPR014756 Immunoglobulin E-set M892_06685 0455bed116292e15f244171882e0242f 883 Pfam PF03174 Chitobiase/beta-hexosaminidase C-terminal domain 804 879 1.8E-27 T 12-10-2018 IPR004867 Chitobiase C-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 M892_06685 0455bed116292e15f244171882e0242f 883 SMART SM01081 34 195 1.1E-93 T 12-10-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 M892_06685 0455bed116292e15f244171882e0242f 883 Gene3D G3DSA:3.20.20.80 330 817 2.2E-165 T 12-10-2018 M892_06685 0455bed116292e15f244171882e0242f 883 Gene3D G3DSA:2.60.40.10 818 882 2.4E-23 T 12-10-2018 IPR013783 Immunoglobulin-like fold M892_06685 0455bed116292e15f244171882e0242f 883 Gene3D G3DSA:2.60.40.290 25 167 4.3E-56 T 12-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 M892_06685 0455bed116292e15f244171882e0242f 883 Gene3D G3DSA:3.30.379.10 204 329 4.0E-24 T 12-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 M892_06685 0455bed116292e15f244171882e0242f 883 SUPERFAMILY SSF49384 26 198 1.05E-65 T 12-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 M892_06685 0455bed116292e15f244171882e0242f 883 SUPERFAMILY SSF51445 332 772 6.32E-144 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily M892_25370 a0c5eb0d3fd134ebef110f6b1a9461b1 635 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 165 247 7.8E-31 T 12-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 M892_25370 a0c5eb0d3fd134ebef110f6b1a9461b1 635 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 278 620 2.6E-87 T 12-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 M892_25370 a0c5eb0d3fd134ebef110f6b1a9461b1 635 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 167 255 3.1E-15 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 M892_25370 a0c5eb0d3fd134ebef110f6b1a9461b1 635 Gene3D G3DSA:3.40.930.10 1 147 1.4E-40 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 M892_25370 a0c5eb0d3fd134ebef110f6b1a9461b1 635 SUPERFAMILY SSF55804 1 145 4.06E-38 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 M892_25370 a0c5eb0d3fd134ebef110f6b1a9461b1 635 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 5 131 2.0E-42 T 12-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 M892_25370 a0c5eb0d3fd134ebef110f6b1a9461b1 635 Gene3D G3DSA:3.40.50.2300 155 263 1.3E-39 T 12-10-2018 M892_25370 a0c5eb0d3fd134ebef110f6b1a9461b1 635 Pfam PF02378 Phosphotransferase system, EIIC 292 567 2.5E-16 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 M892_25370 a0c5eb0d3fd134ebef110f6b1a9461b1 635 SUPERFAMILY SSF52794 164 259 5.75E-35 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 M892_25370 a0c5eb0d3fd134ebef110f6b1a9461b1 635 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 145 1.0E-34 T 12-10-2018 IPR002178 PTS EIIA type-2 domain M892_26075 ea19e86f465120dda50de49972130945 593 Pfam PF17289 Terminase RNaseH-like domain 419 578 2.6E-38 T 12-10-2018 IPR035421 Terminase, large subunit gp17-like M892_26075 ea19e86f465120dda50de49972130945 593 Pfam PF03237 Terminase-like family 171 392 6.0E-61 T 12-10-2018 IPR004921 Terminase large subunit, T4likevirus-type M892_26075 ea19e86f465120dda50de49972130945 593 Gene3D G3DSA:3.40.50.300 88 311 1.6E-23 T 12-10-2018 M892_26075 ea19e86f465120dda50de49972130945 593 Gene3D G3DSA:3.30.420.240 386 577 1.7E-12 T 12-10-2018 M892_26075 ea19e86f465120dda50de49972130945 593 Pfam PF06056 Putative ATPase subunit of terminase (gpP-like) 6 63 9.8E-20 T 12-10-2018 IPR010332 ATPase terminase subunit, putative GO:0005524|GO:0019069 M892_07345 23a2f412ffa8f8fcf143db96e5645d52 441 SUPERFAMILY SSF53098 108 362 3.19E-24 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_07345 23a2f412ffa8f8fcf143db96e5645d52 441 Pfam PF01609 Transposase DDE domain 128 351 2.6E-23 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_07345 23a2f412ffa8f8fcf143db96e5645d52 441 Pfam PF13006 Insertion element 4 transposase N-terminal 16 107 1.7E-24 T 12-10-2018 IPR024473 Transposase, IS4, N-terminal M892_07600 23a2f412ffa8f8fcf143db96e5645d52 441 SUPERFAMILY SSF53098 108 362 3.19E-24 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_07600 23a2f412ffa8f8fcf143db96e5645d52 441 Pfam PF01609 Transposase DDE domain 128 351 2.6E-23 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_07600 23a2f412ffa8f8fcf143db96e5645d52 441 Pfam PF13006 Insertion element 4 transposase N-terminal 16 107 1.7E-24 T 12-10-2018 IPR024473 Transposase, IS4, N-terminal M892_13450 23a2f412ffa8f8fcf143db96e5645d52 441 SUPERFAMILY SSF53098 108 362 3.19E-24 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_13450 23a2f412ffa8f8fcf143db96e5645d52 441 Pfam PF01609 Transposase DDE domain 128 351 2.6E-23 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_13450 23a2f412ffa8f8fcf143db96e5645d52 441 Pfam PF13006 Insertion element 4 transposase N-terminal 16 107 1.7E-24 T 12-10-2018 IPR024473 Transposase, IS4, N-terminal M892_04435 23a2f412ffa8f8fcf143db96e5645d52 441 SUPERFAMILY SSF53098 108 362 3.19E-24 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_04435 23a2f412ffa8f8fcf143db96e5645d52 441 Pfam PF01609 Transposase DDE domain 128 351 2.6E-23 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_04435 23a2f412ffa8f8fcf143db96e5645d52 441 Pfam PF13006 Insertion element 4 transposase N-terminal 16 107 1.7E-24 T 12-10-2018 IPR024473 Transposase, IS4, N-terminal M892_23720 23a2f412ffa8f8fcf143db96e5645d52 441 SUPERFAMILY SSF53098 108 362 3.19E-24 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_23720 23a2f412ffa8f8fcf143db96e5645d52 441 Pfam PF01609 Transposase DDE domain 128 351 2.6E-23 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_23720 23a2f412ffa8f8fcf143db96e5645d52 441 Pfam PF13006 Insertion element 4 transposase N-terminal 16 107 1.7E-24 T 12-10-2018 IPR024473 Transposase, IS4, N-terminal M892_08880 23a2f412ffa8f8fcf143db96e5645d52 441 SUPERFAMILY SSF53098 108 362 3.19E-24 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_08880 23a2f412ffa8f8fcf143db96e5645d52 441 Pfam PF01609 Transposase DDE domain 128 351 2.6E-23 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_08880 23a2f412ffa8f8fcf143db96e5645d52 441 Pfam PF13006 Insertion element 4 transposase N-terminal 16 107 1.7E-24 T 12-10-2018 IPR024473 Transposase, IS4, N-terminal M892_25400 23a2f412ffa8f8fcf143db96e5645d52 441 SUPERFAMILY SSF53098 108 362 3.19E-24 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_25400 23a2f412ffa8f8fcf143db96e5645d52 441 Pfam PF01609 Transposase DDE domain 128 351 2.6E-23 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_25400 23a2f412ffa8f8fcf143db96e5645d52 441 Pfam PF13006 Insertion element 4 transposase N-terminal 16 107 1.7E-24 T 12-10-2018 IPR024473 Transposase, IS4, N-terminal M892_10505 23a2f412ffa8f8fcf143db96e5645d52 441 SUPERFAMILY SSF53098 108 362 3.19E-24 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_10505 23a2f412ffa8f8fcf143db96e5645d52 441 Pfam PF01609 Transposase DDE domain 128 351 2.6E-23 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_10505 23a2f412ffa8f8fcf143db96e5645d52 441 Pfam PF13006 Insertion element 4 transposase N-terminal 16 107 1.7E-24 T 12-10-2018 IPR024473 Transposase, IS4, N-terminal M892_26705 23a2f412ffa8f8fcf143db96e5645d52 441 SUPERFAMILY SSF53098 108 362 3.19E-24 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_26705 23a2f412ffa8f8fcf143db96e5645d52 441 Pfam PF01609 Transposase DDE domain 128 351 2.6E-23 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_26705 23a2f412ffa8f8fcf143db96e5645d52 441 Pfam PF13006 Insertion element 4 transposase N-terminal 16 107 1.7E-24 T 12-10-2018 IPR024473 Transposase, IS4, N-terminal M892_07165 23a2f412ffa8f8fcf143db96e5645d52 441 SUPERFAMILY SSF53098 108 362 3.19E-24 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_07165 23a2f412ffa8f8fcf143db96e5645d52 441 Pfam PF01609 Transposase DDE domain 128 351 2.6E-23 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_07165 23a2f412ffa8f8fcf143db96e5645d52 441 Pfam PF13006 Insertion element 4 transposase N-terminal 16 107 1.7E-24 T 12-10-2018 IPR024473 Transposase, IS4, N-terminal M892_05205 23a2f412ffa8f8fcf143db96e5645d52 441 SUPERFAMILY SSF53098 108 362 3.19E-24 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_05205 23a2f412ffa8f8fcf143db96e5645d52 441 Pfam PF01609 Transposase DDE domain 128 351 2.6E-23 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_05205 23a2f412ffa8f8fcf143db96e5645d52 441 Pfam PF13006 Insertion element 4 transposase N-terminal 16 107 1.7E-24 T 12-10-2018 IPR024473 Transposase, IS4, N-terminal M892_22330 23a2f412ffa8f8fcf143db96e5645d52 441 SUPERFAMILY SSF53098 108 362 3.19E-24 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_22330 23a2f412ffa8f8fcf143db96e5645d52 441 Pfam PF01609 Transposase DDE domain 128 351 2.6E-23 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_22330 23a2f412ffa8f8fcf143db96e5645d52 441 Pfam PF13006 Insertion element 4 transposase N-terminal 16 107 1.7E-24 T 12-10-2018 IPR024473 Transposase, IS4, N-terminal M892_24600 23a2f412ffa8f8fcf143db96e5645d52 441 SUPERFAMILY SSF53098 108 362 3.19E-24 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_24600 23a2f412ffa8f8fcf143db96e5645d52 441 Pfam PF01609 Transposase DDE domain 128 351 2.6E-23 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_24600 23a2f412ffa8f8fcf143db96e5645d52 441 Pfam PF13006 Insertion element 4 transposase N-terminal 16 107 1.7E-24 T 12-10-2018 IPR024473 Transposase, IS4, N-terminal M892_23145 23a2f412ffa8f8fcf143db96e5645d52 441 SUPERFAMILY SSF53098 108 362 3.19E-24 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_23145 23a2f412ffa8f8fcf143db96e5645d52 441 Pfam PF01609 Transposase DDE domain 128 351 2.6E-23 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_23145 23a2f412ffa8f8fcf143db96e5645d52 441 Pfam PF13006 Insertion element 4 transposase N-terminal 16 107 1.7E-24 T 12-10-2018 IPR024473 Transposase, IS4, N-terminal M892_14620 23a2f412ffa8f8fcf143db96e5645d52 441 SUPERFAMILY SSF53098 108 362 3.19E-24 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_14620 23a2f412ffa8f8fcf143db96e5645d52 441 Pfam PF01609 Transposase DDE domain 128 351 2.6E-23 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_14620 23a2f412ffa8f8fcf143db96e5645d52 441 Pfam PF13006 Insertion element 4 transposase N-terminal 16 107 1.7E-24 T 12-10-2018 IPR024473 Transposase, IS4, N-terminal M892_15895 23a2f412ffa8f8fcf143db96e5645d52 441 SUPERFAMILY SSF53098 108 362 3.19E-24 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_15895 23a2f412ffa8f8fcf143db96e5645d52 441 Pfam PF01609 Transposase DDE domain 128 351 2.6E-23 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_15895 23a2f412ffa8f8fcf143db96e5645d52 441 Pfam PF13006 Insertion element 4 transposase N-terminal 16 107 1.7E-24 T 12-10-2018 IPR024473 Transposase, IS4, N-terminal M892_10025 23a2f412ffa8f8fcf143db96e5645d52 441 SUPERFAMILY SSF53098 108 362 3.19E-24 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_10025 23a2f412ffa8f8fcf143db96e5645d52 441 Pfam PF01609 Transposase DDE domain 128 351 2.6E-23 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_10025 23a2f412ffa8f8fcf143db96e5645d52 441 Pfam PF13006 Insertion element 4 transposase N-terminal 16 107 1.7E-24 T 12-10-2018 IPR024473 Transposase, IS4, N-terminal M892_10715 23a2f412ffa8f8fcf143db96e5645d52 441 SUPERFAMILY SSF53098 108 362 3.19E-24 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_10715 23a2f412ffa8f8fcf143db96e5645d52 441 Pfam PF01609 Transposase DDE domain 128 351 2.6E-23 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_10715 23a2f412ffa8f8fcf143db96e5645d52 441 Pfam PF13006 Insertion element 4 transposase N-terminal 16 107 1.7E-24 T 12-10-2018 IPR024473 Transposase, IS4, N-terminal M892_25315 a277ca63a2075398236039b3dcddd9b9 106 SUPERFAMILY SSF88697 5 105 1.12E-31 T 12-10-2018 IPR015947 PUA-like superfamily M892_25315 a277ca63a2075398236039b3dcddd9b9 106 Gene3D G3DSA:2.30.130.30 3 105 2.7E-44 T 12-10-2018 M892_25315 a277ca63a2075398236039b3dcddd9b9 106 Pfam PF04266 ASCH domain 9 105 1.4E-14 T 12-10-2018 IPR007374 ASCH domain M892_25315 a277ca63a2075398236039b3dcddd9b9 106 Hamap MF_00684 UPF0267 protein YqfB [yqfB]. 4 105 29.861 T 12-10-2018 IPR008314 Uncharacterised conserved protein UCP029143 M892_25315 a277ca63a2075398236039b3dcddd9b9 106 SMART SM01022 8 106 1.9E-26 T 12-10-2018 IPR007374 ASCH domain M892_25315 a277ca63a2075398236039b3dcddd9b9 106 PIRSF PIRSF029143 3 106 2.2E-46 T 12-10-2018 IPR008314 Uncharacterised conserved protein UCP029143 M892_15990 c8f00da976590e682c234bda5eaab59c 520 Pfam PF02743 Cache domain 50 264 1.1E-21 T 12-10-2018 IPR033479 Double Cache domain 1 M892_15990 c8f00da976590e682c234bda5eaab59c 520 SUPERFAMILY SSF55073 368 516 6.51E-44 T 12-10-2018 IPR029787 Nucleotide cyclase M892_15990 c8f00da976590e682c234bda5eaab59c 520 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 362 516 1.9E-44 T 12-10-2018 IPR000160 GGDEF domain M892_15990 c8f00da976590e682c234bda5eaab59c 520 SMART SM00267 352 517 6.4E-50 T 12-10-2018 IPR000160 GGDEF domain M892_15990 c8f00da976590e682c234bda5eaab59c 520 Gene3D G3DSA:3.30.450.20 155 278 3.2E-13 T 12-10-2018 M892_15990 c8f00da976590e682c234bda5eaab59c 520 Gene3D G3DSA:3.30.70.270 357 518 6.8E-50 T 12-10-2018 M892_15990 c8f00da976590e682c234bda5eaab59c 520 SUPERFAMILY SSF103190 182 263 3.34E-11 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily M892_15990 c8f00da976590e682c234bda5eaab59c 520 Pfam PF00990 Diguanylate cyclase, GGDEF domain 364 513 3.5E-43 T 12-10-2018 IPR000160 GGDEF domain M892_15990 c8f00da976590e682c234bda5eaab59c 520 SUPERFAMILY SSF103190 72 180 4.71E-7 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily M892_07265 1578d49fdaea180c7e617bf48f4f4725 381 Pfam PF00684 DnaJ central domain 149 209 3.3E-15 T 12-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 M892_07265 1578d49fdaea180c7e617bf48f4f4725 381 Pfam PF01556 DnaJ C terminal domain 123 335 3.9E-45 T 12-10-2018 IPR002939 Chaperone DnaJ, C-terminal M892_07265 1578d49fdaea180c7e617bf48f4f4725 381 Pfam PF00226 DnaJ domain 5 67 6.4E-27 T 12-10-2018 IPR001623 DnaJ domain M892_07265 1578d49fdaea180c7e617bf48f4f4725 381 SUPERFAMILY SSF49493 116 263 4.06E-19 T 12-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 M892_07265 1578d49fdaea180c7e617bf48f4f4725 381 Gene3D G3DSA:2.10.230.10 138 211 1.7E-25 T 12-10-2018 M892_07265 1578d49fdaea180c7e617bf48f4f4725 381 SUPERFAMILY SSF57938 136 212 2.75E-23 T 12-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily M892_07265 1578d49fdaea180c7e617bf48f4f4725 381 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 351 2.2E-140 T 12-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 M892_07265 1578d49fdaea180c7e617bf48f4f4725 381 SUPERFAMILY SSF49493 261 346 7.19E-23 T 12-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 M892_07265 1578d49fdaea180c7e617bf48f4f4725 381 SMART SM00271 4 62 7.1E-31 T 12-10-2018 IPR001623 DnaJ domain M892_07265 1578d49fdaea180c7e617bf48f4f4725 381 SUPERFAMILY SSF46565 1 109 9.81E-36 T 12-10-2018 IPR036869 Chaperone J-domain superfamily M892_07265 1578d49fdaea180c7e617bf48f4f4725 381 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 375 42.793 T 12-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 M892_07265 1578d49fdaea180c7e617bf48f4f4725 381 Gene3D G3DSA:1.10.287.110 1 115 3.4E-36 T 12-10-2018 IPR036869 Chaperone J-domain superfamily M892_07265 1578d49fdaea180c7e617bf48f4f4725 381 Gene3D G3DSA:2.60.260.20 257 365 8.5E-29 T 12-10-2018 M892_07265 1578d49fdaea180c7e617bf48f4f4725 381 PRINTS PR00625 DnaJ domain signature 62 81 4.2E-32 T 12-10-2018 IPR001623 DnaJ domain M892_07265 1578d49fdaea180c7e617bf48f4f4725 381 PRINTS PR00625 DnaJ domain signature 25 40 4.2E-32 T 12-10-2018 IPR001623 DnaJ domain M892_07265 1578d49fdaea180c7e617bf48f4f4725 381 PRINTS PR00625 DnaJ domain signature 42 62 4.2E-32 T 12-10-2018 IPR001623 DnaJ domain M892_07265 1578d49fdaea180c7e617bf48f4f4725 381 PRINTS PR00625 DnaJ domain signature 7 25 4.2E-32 T 12-10-2018 IPR001623 DnaJ domain M892_07265 1578d49fdaea180c7e617bf48f4f4725 381 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 12-10-2018 IPR018253 DnaJ domain, conserved site M892_02060 0921b14d3e6d4cc157ea92e4bb28592f 592 Pfam PF00994 Probable molybdopterin binding domain 366 503 1.8E-25 T 12-10-2018 IPR001453 MoaB/Mog domain M892_02060 0921b14d3e6d4cc157ea92e4bb28592f 592 SUPERFAMILY SSF53218 363 508 2.09E-43 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily M892_02060 0921b14d3e6d4cc157ea92e4bb28592f 592 SUPERFAMILY SSF52540 7 169 1.8E-26 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_02060 0921b14d3e6d4cc157ea92e4bb28592f 592 Gene3D G3DSA:3.90.105.10 212 360 6.1E-134 T 12-10-2018 M892_02060 0921b14d3e6d4cc157ea92e4bb28592f 592 Pfam PF03454 MoeA C-terminal region (domain IV) 517 588 7.4E-20 T 12-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 M892_02060 0921b14d3e6d4cc157ea92e4bb28592f 592 Gene3D G3DSA:3.40.980.10 211 512 6.1E-134 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily M892_02060 0921b14d3e6d4cc157ea92e4bb28592f 592 SUPERFAMILY SSF63867 512 590 1.96E-22 T 12-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 M892_02060 0921b14d3e6d4cc157ea92e4bb28592f 592 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 9 142 2.9E-47 T 12-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 M892_02060 0921b14d3e6d4cc157ea92e4bb28592f 592 PIRSF PIRSF036618 1 592 0.0 T 12-10-2018 IPR012182 Bifunctional molybdenum cofactor biosynthesis MobB/MoeA M892_02060 0921b14d3e6d4cc157ea92e4bb28592f 592 Gene3D G3DSA:2.170.190.11 236 327 6.1E-134 T 12-10-2018 M892_02060 0921b14d3e6d4cc157ea92e4bb28592f 592 Gene3D G3DSA:2.40.340.10 513 583 6.1E-134 T 12-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 M892_02060 0921b14d3e6d4cc157ea92e4bb28592f 592 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 362 499 1.4E-31 T 12-10-2018 IPR001453 MoaB/Mog domain M892_02060 0921b14d3e6d4cc157ea92e4bb28592f 592 SMART SM00852 366 503 7.5E-40 T 12-10-2018 IPR001453 MoaB/Mog domain M892_02060 0921b14d3e6d4cc157ea92e4bb28592f 592 Pfam PF03453 MoeA N-terminal region (domain I and II) 194 353 1.7E-37 T 12-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 M892_02060 0921b14d3e6d4cc157ea92e4bb28592f 592 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 439 472 - T 12-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 M892_02060 0921b14d3e6d4cc157ea92e4bb28592f 592 Gene3D G3DSA:2.20.25.120 53 85 1.7E-55 T 12-10-2018 M892_02060 0921b14d3e6d4cc157ea92e4bb28592f 592 SUPERFAMILY SSF63882 192 362 1.83E-46 T 12-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 M892_02060 0921b14d3e6d4cc157ea92e4bb28592f 592 Gene3D G3DSA:3.40.50.300 10 165 1.7E-55 T 12-10-2018 M892_02060 0921b14d3e6d4cc157ea92e4bb28592f 592 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 9 167 1.3E-42 T 12-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 M892_13280 6443a3e73b75b698b1dc5ffada809f0b 384 Gene3D G3DSA:3.30.300.10 102 373 2.5E-177 T 12-10-2018 M892_13280 6443a3e73b75b698b1dc5ffada809f0b 384 Gene3D G3DSA:3.30.300.10 11 270 2.5E-177 T 12-10-2018 M892_13280 6443a3e73b75b698b1dc5ffada809f0b 384 SUPERFAMILY SSF55973 3 109 1.06E-47 T 12-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 M892_13280 6443a3e73b75b698b1dc5ffada809f0b 384 SUPERFAMILY SSF55973 111 232 8.24E-50 T 12-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 M892_13280 6443a3e73b75b698b1dc5ffada809f0b 384 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 369 1.9E-68 T 12-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 M892_13280 6443a3e73b75b698b1dc5ffada809f0b 384 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 1.8E-43 T 12-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 M892_13280 6443a3e73b75b698b1dc5ffada809f0b 384 Gene3D G3DSA:3.30.300.10 5 233 2.5E-177 T 12-10-2018 M892_13280 6443a3e73b75b698b1dc5ffada809f0b 384 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 12-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 M892_13280 6443a3e73b75b698b1dc5ffada809f0b 384 PIRSF PIRSF000497 1 381 2.9E-174 T 12-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 M892_13280 6443a3e73b75b698b1dc5ffada809f0b 384 SUPERFAMILY SSF55973 233 382 1.57E-70 T 12-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 M892_13280 6443a3e73b75b698b1dc5ffada809f0b 384 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 231 8.5E-44 T 12-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 M892_13280 6443a3e73b75b698b1dc5ffada809f0b 384 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 381 58.652 T 12-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 M892_13280 6443a3e73b75b698b1dc5ffada809f0b 384 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 12-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 M892_13280 6443a3e73b75b698b1dc5ffada809f0b 384 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 379 1.3E-195 T 12-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 M892_18785 7a3d951acb74faa71d8cf9e4557c2894 244 SMART SM00382 30 214 6.2E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_18785 7a3d951acb74faa71d8cf9e4557c2894 244 Gene3D G3DSA:3.40.50.300 2 243 3.8E-54 T 12-10-2018 M892_18785 7a3d951acb74faa71d8cf9e4557c2894 244 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_18785 7a3d951acb74faa71d8cf9e4557c2894 244 SUPERFAMILY SSF52540 5 227 1.38E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_18785 7a3d951acb74faa71d8cf9e4557c2894 244 Pfam PF00005 ABC transporter 21 166 2.8E-24 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_02715 321b45005b38b3659f84e26e5151b451 225 Pfam PF04172 LrgB-like family 6 218 6.9E-71 T 12-10-2018 IPR007300 CidB/LrgB family M892_21155 5c742ed8ce24cb39ec76e9ce2b101b4c 380 SMART SM00448 1 118 1.1E-8 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_21155 5c742ed8ce24cb39ec76e9ce2b101b4c 380 Pfam PF00072 Response regulator receiver domain 3 117 2.5E-15 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_21155 5c742ed8ce24cb39ec76e9ce2b101b4c 380 SUPERFAMILY SSF141868 140 379 7.19E-67 T 12-10-2018 IPR035919 EAL domain superfamily M892_21155 5c742ed8ce24cb39ec76e9ce2b101b4c 380 Gene3D G3DSA:3.20.20.450 135 379 2.9E-69 T 12-10-2018 IPR035919 EAL domain superfamily M892_21155 5c742ed8ce24cb39ec76e9ce2b101b4c 380 Gene3D G3DSA:3.40.50.2300 1 129 4.1E-20 T 12-10-2018 M892_21155 5c742ed8ce24cb39ec76e9ce2b101b4c 380 SUPERFAMILY SSF52172 1 125 6.69E-18 T 12-10-2018 IPR011006 CheY-like superfamily M892_21155 5c742ed8ce24cb39ec76e9ce2b101b4c 380 SMART SM00052 134 375 2.8E-59 T 12-10-2018 IPR001633 EAL domain M892_21155 5c742ed8ce24cb39ec76e9ce2b101b4c 380 Pfam PF00563 EAL domain 141 370 4.2E-58 T 12-10-2018 IPR001633 EAL domain M892_21295 faf5f3ded74e5f2a66f24ffb5d28345f 302 Gene3D G3DSA:3.40.50.1980 171 274 7.7E-89 T 12-10-2018 M892_21295 faf5f3ded74e5f2a66f24ffb5d28345f 302 Gene3D G3DSA:3.40.50.1980 25 280 7.7E-89 T 12-10-2018 M892_21295 faf5f3ded74e5f2a66f24ffb5d28345f 302 SUPERFAMILY SSF53807 20 282 6.54E-60 T 12-10-2018 M892_21295 faf5f3ded74e5f2a66f24ffb5d28345f 302 Pfam PF01497 Periplasmic binding protein 41 275 2.9E-21 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain M892_08400 5c0aec92d82d58b3625be047f50ad212 454 Gene3D G3DSA:3.90.190.20 315 453 2.5E-36 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 M892_08400 5c0aec92d82d58b3625be047f50ad212 454 Pfam PF01225 Mur ligase family, catalytic domain 24 79 1.0E-9 T 12-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 M892_08400 5c0aec92d82d58b3625be047f50ad212 454 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 451 33.694 T 12-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 M892_08400 5c0aec92d82d58b3625be047f50ad212 454 Pfam PF02875 Mur ligase family, glutamate ligase domain 316 393 1.8E-12 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 M892_08400 5c0aec92d82d58b3625be047f50ad212 454 Gene3D G3DSA:3.40.1390.10 1 80 2.2E-29 T 12-10-2018 M892_08400 5c0aec92d82d58b3625be047f50ad212 454 Pfam PF08245 Mur ligase middle domain 105 295 4.6E-48 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 M892_08400 5c0aec92d82d58b3625be047f50ad212 454 SUPERFAMILY SSF53244 316 450 1.68E-33 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 M892_08400 5c0aec92d82d58b3625be047f50ad212 454 SUPERFAMILY SSF63418 1 96 1.1E-26 T 12-10-2018 IPR035911 MurE/MurF, N-terminal M892_08400 5c0aec92d82d58b3625be047f50ad212 454 SUPERFAMILY SSF53623 100 313 7.2E-55 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 M892_08400 5c0aec92d82d58b3625be047f50ad212 454 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 29 450 7.2E-140 T 12-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 M892_08400 5c0aec92d82d58b3625be047f50ad212 454 Gene3D G3DSA:3.40.1190.10 81 314 1.1E-74 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 M892_10810 460feccdc620b5ee3cee2fb0722ed21a 161 SMART SM01001 1 152 2.2E-103 T 12-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 M892_10810 460feccdc620b5ee3cee2fb0722ed21a 161 PIRSF PIRSF001338 1 160 6.9E-69 T 12-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 M892_10810 460feccdc620b5ee3cee2fb0722ed21a 161 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 3 157 4.9E-67 T 12-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 M892_10810 460feccdc620b5ee3cee2fb0722ed21a 161 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 3 156 32.334 T 12-10-2018 IPR033747 Class I PurE M892_10810 460feccdc620b5ee3cee2fb0722ed21a 161 SUPERFAMILY SSF52255 2 158 1.7E-66 T 12-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 M892_10810 460feccdc620b5ee3cee2fb0722ed21a 161 Pfam PF00731 AIR carboxylase 2 150 1.8E-64 T 12-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 M892_10810 460feccdc620b5ee3cee2fb0722ed21a 161 Gene3D G3DSA:3.40.50.7700 1 161 7.0E-73 T 12-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 M892_00130 1b59ad72392ccc95fb72e139da63e60e 202 Pfam PF01066 CDP-alcohol phosphatidyltransferase 27 89 2.9E-9 T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 M892_00130 1b59ad72392ccc95fb72e139da63e60e 202 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 68 89 - T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 M892_00130 1b59ad72392ccc95fb72e139da63e60e 202 Gene3D G3DSA:1.20.120.1760 7 199 3.2E-19 T 12-10-2018 M892_25820 7f422d066a2219f25727733c6ba937fa 404 SUPERFAMILY SSF103473 7 388 6.67E-42 T 12-10-2018 IPR036259 MFS transporter superfamily M892_25820 7f422d066a2219f25727733c6ba937fa 404 Pfam PF07690 Major Facilitator Superfamily 27 355 2.6E-23 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 M892_25820 7f422d066a2219f25727733c6ba937fa 404 Gene3D G3DSA:1.20.1250.20 6 393 2.7E-39 T 12-10-2018 M892_09765 ca79685db126cb7a27719c4ea0b22d2d 194 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 3 194 44.456 T 12-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 M892_09765 ca79685db126cb7a27719c4ea0b22d2d 194 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 4 194 1.1E-95 T 12-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 M892_09765 ca79685db126cb7a27719c4ea0b22d2d 194 Pfam PF01521 Iron-sulphur cluster biosynthesis 3 100 1.3E-11 T 12-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 M892_09765 ca79685db126cb7a27719c4ea0b22d2d 194 SUPERFAMILY SSF117916 97 187 8.5E-23 T 12-10-2018 IPR034904 Fe-S cluster assembly domain superfamily M892_09765 ca79685db126cb7a27719c4ea0b22d2d 194 Gene3D G3DSA:2.60.300.12 2 100 1.2E-13 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 M892_09765 ca79685db126cb7a27719c4ea0b22d2d 194 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 121 180 2.0E-26 T 12-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 M892_09765 ca79685db126cb7a27719c4ea0b22d2d 194 SUPERFAMILY SSF89360 3 99 2.35E-22 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 M892_09765 ca79685db126cb7a27719c4ea0b22d2d 194 Pfam PF01106 NifU-like domain 113 180 3.2E-19 T 12-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 M892_09765 ca79685db126cb7a27719c4ea0b22d2d 194 Gene3D G3DSA:3.30.300.130 103 191 3.0E-19 T 12-10-2018 IPR034904 Fe-S cluster assembly domain superfamily M892_06820 5587b1f0f52befcf241667349d7b8813 474 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 437 8.1E-153 T 12-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 M892_06820 5587b1f0f52befcf241667349d7b8813 474 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 6.6E-30 T 12-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 M892_06820 5587b1f0f52befcf241667349d7b8813 474 SUPERFAMILY SSF102114 123 371 5.36E-61 T 12-10-2018 M892_06820 5587b1f0f52befcf241667349d7b8813 474 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 440 2.7E-199 T 12-10-2018 M892_06820 5587b1f0f52befcf241667349d7b8813 474 SMART SM00729 147 367 3.3E-63 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 M892_06820 5587b1f0f52befcf241667349d7b8813 474 Gene3D G3DSA:3.40.50.12160 3 138 1.6E-34 T 12-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily M892_06820 5587b1f0f52befcf241667349d7b8813 474 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 12-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 M892_06820 5587b1f0f52befcf241667349d7b8813 474 Pfam PF04055 Radical SAM superfamily 151 325 2.9E-27 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 M892_06820 5587b1f0f52befcf241667349d7b8813 474 Gene3D G3DSA:3.80.30.20 145 379 1.1E-82 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe M892_06820 5587b1f0f52befcf241667349d7b8813 474 Pfam PF01938 TRAM domain 381 440 8.0E-17 T 12-10-2018 IPR002792 TRAM domain M892_06820 5587b1f0f52befcf241667349d7b8813 474 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 440 72.597 T 12-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 M892_07680 7145fbf603dfec95523c0adefa60ba71 350 Gene3D G3DSA:2.40.10.240 64 163 2.9E-117 T 12-10-2018 M892_07680 7145fbf603dfec95523c0adefa60ba71 350 SUPERFAMILY SSF111337 1 345 4.97E-138 T 12-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 M892_07680 7145fbf603dfec95523c0adefa60ba71 350 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 345 4.8E-158 T 12-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 M892_07680 7145fbf603dfec95523c0adefa60ba71 350 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 346 47.046 T 12-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 M892_07680 7145fbf603dfec95523c0adefa60ba71 350 Gene3D G3DSA:3.40.1780.10 14 345 2.9E-117 T 12-10-2018 M892_07680 7145fbf603dfec95523c0adefa60ba71 350 Pfam PF02547 Queuosine biosynthesis protein 3 345 3.2E-133 T 12-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 M892_25340 3c15539d33e450169bb66496862b152c 292 SUPERFAMILY SSF51735 4 166 3.08E-52 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_25340 3c15539d33e450169bb66496862b152c 292 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 168 287 1.3E-31 T 12-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 M892_25340 3c15539d33e450169bb66496862b152c 292 Gene3D G3DSA:1.10.1040.10 167 292 1.3E-37 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 M892_25340 3c15539d33e450169bb66496862b152c 292 SUPERFAMILY SSF48179 167 290 6.69E-39 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 M892_25340 3c15539d33e450169bb66496862b152c 292 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 6 163 1.4E-47 T 12-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 M892_25340 3c15539d33e450169bb66496862b152c 292 Gene3D G3DSA:3.40.50.720 1 166 7.1E-50 T 12-10-2018 M892_25340 3c15539d33e450169bb66496862b152c 292 PIRSF PIRSF000103 1 292 1.2E-77 T 12-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 M892_18540 a16c044ef238fe96ba9b3c0e8c9375e7 654 SMART SM00487 310 519 4.7E-10 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain M892_18540 a16c044ef238fe96ba9b3c0e8c9375e7 654 Gene3D G3DSA:3.40.50.300 313 500 6.3E-49 T 12-10-2018 M892_18540 a16c044ef238fe96ba9b3c0e8c9375e7 654 Pfam PF04851 Type III restriction enzyme, res subunit 313 482 3.2E-18 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 M892_18540 a16c044ef238fe96ba9b3c0e8c9375e7 654 SUPERFAMILY SSF52540 278 538 2.66E-22 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_18540 a16c044ef238fe96ba9b3c0e8c9375e7 654 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 67 610 4.4E-102 T 12-10-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 M892_18540 a16c044ef238fe96ba9b3c0e8c9375e7 654 Gene3D G3DSA:3.40.50.300 501 642 1.5E-8 T 12-10-2018 M892_18540 a16c044ef238fe96ba9b3c0e8c9375e7 654 Gene3D G3DSA:3.90.1570.50 106 263 1.7E-14 T 12-10-2018 M892_18540 a16c044ef238fe96ba9b3c0e8c9375e7 654 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 7 218 8.8E-38 T 12-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 M892_16955 39d5f6c9f81fb5ee89eb62b7bad39e61 271 Gene3D G3DSA:3.60.130.10 1 271 1.1E-85 T 12-10-2018 M892_16955 39d5f6c9f81fb5ee89eb62b7bad39e61 271 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 3 269 2.3E-64 T 12-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 M892_16955 39d5f6c9f81fb5ee89eb62b7bad39e61 271 SUPERFAMILY SSF51197 2 270 3.8E-89 T 12-10-2018 M892_01660 6c53d9581274a02feb4e8f3ccbda92de 664 SMART SM00245 326 527 3.5E-63 T 12-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 M892_01660 6c53d9581274a02feb4e8f3ccbda92de 664 SMART SM00228 246 323 9.9E-8 T 12-10-2018 IPR001478 PDZ domain GO:0005515 M892_01660 6c53d9581274a02feb4e8f3ccbda92de 664 Pfam PF08180 B melanoma antigen family 9 36 1.8E-15 T 12-10-2018 IPR012530 B melanoma antigen-like M892_01660 6c53d9581274a02feb4e8f3ccbda92de 664 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 197 547 7.7E-114 T 12-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 M892_01660 6c53d9581274a02feb4e8f3ccbda92de 664 Pfam PF03572 Peptidase family S41 356 525 2.2E-52 T 12-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 M892_01660 6c53d9581274a02feb4e8f3ccbda92de 664 Gene3D G3DSA:3.90.226.10 324 544 1.2E-57 T 12-10-2018 M892_01660 6c53d9581274a02feb4e8f3ccbda92de 664 SUPERFAMILY SSF52096 166 531 4.31E-73 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily M892_01660 6c53d9581274a02feb4e8f3ccbda92de 664 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 531 662 1.7E-37 T 12-10-2018 IPR020992 Tail specific protease, C-terminal M892_01660 6c53d9581274a02feb4e8f3ccbda92de 664 Gene3D G3DSA:2.30.42.10 236 320 6.9E-12 T 12-10-2018 M892_01660 6c53d9581274a02feb4e8f3ccbda92de 664 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 239 319 6.7E-13 T 12-10-2018 IPR001478 PDZ domain GO:0005515 M892_01660 6c53d9581274a02feb4e8f3ccbda92de 664 SUPERFAMILY SSF50156 217 336 3.67E-15 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 M892_09480 27544fb01418050100d69ca1eee48a8a 68 SUPERFAMILY SSF47336 4 66 2.09E-10 T 12-10-2018 IPR036736 ACP-like superfamily M892_09480 27544fb01418050100d69ca1eee48a8a 68 Gene3D G3DSA:1.10.1200.10 3 67 5.7E-11 T 12-10-2018 IPR036736 ACP-like superfamily M892_09480 27544fb01418050100d69ca1eee48a8a 68 Pfam PF00550 Phosphopantetheine attachment site 5 66 1.1E-6 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain M892_26505 6882d69226b8d93ed556c79ff46deeb0 338 SUPERFAMILY SSF55031 132 239 1.03E-27 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain M892_26505 6882d69226b8d93ed556c79ff46deeb0 338 Pfam PF07687 Peptidase dimerisation domain 132 225 3.0E-6 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain M892_26505 6882d69226b8d93ed556c79ff46deeb0 338 Pfam PF01546 Peptidase family M20/M25/M40 20 332 4.5E-31 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 M892_26505 6882d69226b8d93ed556c79ff46deeb0 338 Gene3D G3DSA:3.40.630.10 3 320 2.9E-106 T 12-10-2018 M892_26505 6882d69226b8d93ed556c79ff46deeb0 338 Gene3D G3DSA:3.30.70.360 128 243 2.9E-106 T 12-10-2018 M892_26505 6882d69226b8d93ed556c79ff46deeb0 338 SUPERFAMILY SSF53187 3 336 1.35E-66 T 12-10-2018 M892_26505 6882d69226b8d93ed556c79ff46deeb0 338 PIRSF PIRSF005962 1 338 1.8E-101 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 M892_26505 6882d69226b8d93ed556c79ff46deeb0 338 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 2 322 1.4E-80 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 M892_11585 a7fe7f129311e398727bf9c00abc051e 90 Gene3D G3DSA:4.10.520.10 1 90 4.5E-37 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 M892_11585 a7fe7f129311e398727bf9c00abc051e 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 5.7E-19 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 M892_11585 a7fe7f129311e398727bf9c00abc051e 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 5.7E-19 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 M892_11585 a7fe7f129311e398727bf9c00abc051e 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 5.7E-19 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 M892_11585 a7fe7f129311e398727bf9c00abc051e 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.7E-33 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 M892_11585 a7fe7f129311e398727bf9c00abc051e 90 SMART SM00411 1 90 1.6E-46 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 M892_11585 a7fe7f129311e398727bf9c00abc051e 90 SUPERFAMILY SSF47729 1 90 5.3E-33 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 M892_11585 a7fe7f129311e398727bf9c00abc051e 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 12-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 M892_04970 d87ef6b7b0e25e822f61026070f5e901 300 Pfam PF01515 Phosphate acetyl/butaryl transferase 78 294 8.2E-41 T 12-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 M892_04970 d87ef6b7b0e25e822f61026070f5e901 300 Gene3D G3DSA:3.40.718.10 2 299 2.7E-90 T 12-10-2018 M892_04970 d87ef6b7b0e25e822f61026070f5e901 300 SUPERFAMILY SSF53659 5 297 1.56E-57 T 12-10-2018 M892_04970 d87ef6b7b0e25e822f61026070f5e901 300 PIRSF PIRSF000428 2 300 3.4E-72 T 12-10-2018 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 M892_12910 e71ac539b8391b472ef394ecf220692e 263 Pfam PF02405 Permease MlaE 48 259 6.9E-74 T 12-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 M892_12910 e71ac539b8391b472ef394ecf220692e 263 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 9 261 4.9E-95 T 12-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria M892_14205 99c9049a8b64071fa0d4fe0da7bbd576 427 Pfam PF07670 Nucleoside recognition 99 195 6.9E-8 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 M892_14205 99c9049a8b64071fa0d4fe0da7bbd576 427 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 5 420 2.9E-155 T 12-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 M892_14205 99c9049a8b64071fa0d4fe0da7bbd576 427 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 1.3E-26 T 12-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 M892_14205 99c9049a8b64071fa0d4fe0da7bbd576 427 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 201 420 5.6E-74 T 12-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 M892_13645 20983b1a6b04f9ceee5a86df9b66f7a4 316 SUPERFAMILY SSF51735 122 246 2.29E-28 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_13645 20983b1a6b04f9ceee5a86df9b66f7a4 316 SUPERFAMILY SSF50129 4 154 3.2E-35 T 12-10-2018 IPR011032 GroES-like superfamily M892_13645 20983b1a6b04f9ceee5a86df9b66f7a4 316 Pfam PF13602 Zinc-binding dehydrogenase 191 312 4.7E-21 T 12-10-2018 M892_13645 20983b1a6b04f9ceee5a86df9b66f7a4 316 SMART SM00829 12 312 6.2E-14 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 M892_13645 20983b1a6b04f9ceee5a86df9b66f7a4 316 Gene3D G3DSA:3.90.180.10 10 310 2.3E-93 T 12-10-2018 M892_13645 20983b1a6b04f9ceee5a86df9b66f7a4 316 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 93 2.0E-7 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 M892_13645 20983b1a6b04f9ceee5a86df9b66f7a4 316 Gene3D G3DSA:3.40.50.720 133 263 2.3E-93 T 12-10-2018 M892_10495 7289f6a77e2460a850c3e5bec0a9a2f5 305 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 9 293 2.7E-148 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 M892_10495 7289f6a77e2460a850c3e5bec0a9a2f5 305 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 7 302 7.0E-169 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 M892_10495 7289f6a77e2460a850c3e5bec0a9a2f5 305 Gene3D G3DSA:3.30.930.10 1 215 9.8E-110 T 12-10-2018 M892_10495 7289f6a77e2460a850c3e5bec0a9a2f5 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 139 159 2.7E-70 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 M892_10495 7289f6a77e2460a850c3e5bec0a9a2f5 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 113 137 2.7E-70 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 M892_10495 7289f6a77e2460a850c3e5bec0a9a2f5 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 254 270 2.7E-70 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 M892_10495 7289f6a77e2460a850c3e5bec0a9a2f5 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 61 76 2.7E-70 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 M892_10495 7289f6a77e2460a850c3e5bec0a9a2f5 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 82 102 2.7E-70 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 M892_10495 7289f6a77e2460a850c3e5bec0a9a2f5 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 162 177 2.7E-70 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 M892_10495 7289f6a77e2460a850c3e5bec0a9a2f5 305 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 7 294 61.508 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 M892_10495 7289f6a77e2460a850c3e5bec0a9a2f5 305 Gene3D G3DSA:1.20.58.180 216 298 1.1E-33 T 12-10-2018 M892_10495 7289f6a77e2460a850c3e5bec0a9a2f5 305 SUPERFAMILY SSF55681 8 293 2.72E-132 T 12-10-2018 M892_17110 972c96e4d9218a574db488136da5d504 236 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 75 93 - T 12-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site M892_17110 972c96e4d9218a574db488136da5d504 236 SUPERFAMILY SSF51120 74 206 7.33E-18 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal M892_17110 972c96e4d9218a574db488136da5d504 236 Gene3D G3DSA:2.150.10.10 30 86 7.5E-12 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal M892_17110 972c96e4d9218a574db488136da5d504 236 PRINTS PR00313 NodO calcium binding signature 79 87 2.7E-12 T 12-10-2018 M892_17110 972c96e4d9218a574db488136da5d504 236 PRINTS PR00313 NodO calcium binding signature 124 133 2.7E-12 T 12-10-2018 M892_17110 972c96e4d9218a574db488136da5d504 236 PRINTS PR00313 NodO calcium binding signature 70 78 2.7E-12 T 12-10-2018 M892_17110 972c96e4d9218a574db488136da5d504 236 PRINTS PR00313 NodO calcium binding signature 58 69 2.7E-12 T 12-10-2018 M892_17110 972c96e4d9218a574db488136da5d504 236 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 57 75 - T 12-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site M892_17110 972c96e4d9218a574db488136da5d504 236 Gene3D G3DSA:2.150.10.10 87 224 2.8E-11 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal M892_17110 972c96e4d9218a574db488136da5d504 236 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 66 84 - T 12-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site M892_17110 972c96e4d9218a574db488136da5d504 236 SUPERFAMILY SSF51120 9 95 2.22E-18 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal M892_17110 972c96e4d9218a574db488136da5d504 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 12 28 3.5 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 M892_17110 972c96e4d9218a574db488136da5d504 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 70 86 0.0022 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 M892_17110 972c96e4d9218a574db488136da5d504 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 51 68 0.0039 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 M892_17110 972c96e4d9218a574db488136da5d504 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 36 50 39.0 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 M892_17110 972c96e4d9218a574db488136da5d504 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 99 113 0.32 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 M892_11955 0f2920af66463a6409000ca050deb356 606 PIRSF PIRSF000171 1 575 1.4E-45 T 12-10-2018 M892_11955 0f2920af66463a6409000ca050deb356 606 Pfam PF02910 Fumarate reductase flavoprotein C-term 453 581 3.8E-38 T 12-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 M892_11955 0f2920af66463a6409000ca050deb356 606 SUPERFAMILY SSF51905 3 436 4.72E-74 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_11955 0f2920af66463a6409000ca050deb356 606 TIGRFAM TIGR01176 fum_red_Fp: fumarate reductase (quinol), flavoprotein subunit 3 582 0.0 T 12-10-2018 IPR005884 Fumarate reductase, flavoprotein subunit GO:0009061|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.4|KEGG: 00620+1.3.5.4|KEGG: 00650+1.3.5.4|KEGG: 00720+1.3.5.4|MetaCyc: PWY-5392|MetaCyc: PWY-5913|MetaCyc: PWY-7384 M892_11955 0f2920af66463a6409000ca050deb356 606 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 12-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 M892_11955 0f2920af66463a6409000ca050deb356 606 Pfam PF00890 FAD binding domain 7 397 1.3E-114 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 M892_11955 0f2920af66463a6409000ca050deb356 606 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 5.8E-9 T 12-10-2018 M892_11955 0f2920af66463a6409000ca050deb356 606 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 360 382 5.8E-9 T 12-10-2018 M892_11955 0f2920af66463a6409000ca050deb356 606 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 8.5E-5 T 12-10-2018 M892_11955 0f2920af66463a6409000ca050deb356 606 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 375 382 8.5E-5 T 12-10-2018 M892_11955 0f2920af66463a6409000ca050deb356 606 Gene3D G3DSA:4.10.80.40 543 577 6.3E-15 T 12-10-2018 M892_11955 0f2920af66463a6409000ca050deb356 606 Gene3D G3DSA:1.20.58.100 424 538 1.4E-34 T 12-10-2018 M892_11955 0f2920af66463a6409000ca050deb356 606 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 581 4.1E-236 T 12-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 M892_11955 0f2920af66463a6409000ca050deb356 606 SUPERFAMILY SSF46977 444 582 2.22E-43 T 12-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 M892_11955 0f2920af66463a6409000ca050deb356 606 Gene3D G3DSA:3.50.50.60 7 409 1.3E-162 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_11955 0f2920af66463a6409000ca050deb356 606 Gene3D G3DSA:3.90.700.10 237 363 1.3E-162 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 M892_11955 0f2920af66463a6409000ca050deb356 606 SUPERFAMILY SSF56425 227 358 7.48E-42 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 M892_08560 68ecd0b8cb0e229db57b3193858aaa1a 510 SMART SM00880 234 502 1.5E-16 T 12-10-2018 IPR007899 CHAD domain M892_08560 68ecd0b8cb0e229db57b3193858aaa1a 510 Pfam PF05235 CHAD domain 237 436 3.9E-6 T 12-10-2018 IPR007899 CHAD domain M892_08560 68ecd0b8cb0e229db57b3193858aaa1a 510 Pfam PF01928 CYTH domain 3 202 4.6E-32 T 12-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 M892_08560 68ecd0b8cb0e229db57b3193858aaa1a 510 Gene3D G3DSA:2.40.320.10 1 203 2.2E-35 T 12-10-2018 M892_08560 68ecd0b8cb0e229db57b3193858aaa1a 510 Gene3D G3DSA:1.40.20.10 217 449 4.7E-9 T 12-10-2018 IPR038186 CHAD domain superfamily M892_08560 68ecd0b8cb0e229db57b3193858aaa1a 510 SMART SM01118 2 208 1.2E-42 T 12-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 M892_08560 68ecd0b8cb0e229db57b3193858aaa1a 510 SUPERFAMILY SSF55154 1 224 2.94E-51 T 12-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 M892_17220 05c1a88065b9ed570badec82a0af6a34 878 SUPERFAMILY SSF56719 30 520 3.79E-187 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 M892_17220 05c1a88065b9ed570badec82a0af6a34 878 Gene3D G3DSA:3.30.1360.40 236 332 4.9E-235 T 12-10-2018 M892_17220 05c1a88065b9ed570badec82a0af6a34 878 Gene3D G3DSA:2.120.10.90 534 840 1.4E-127 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal M892_17220 05c1a88065b9ed570badec82a0af6a34 878 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 537 583 2.3E-7 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 M892_17220 05c1a88065b9ed570badec82a0af6a34 878 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 587 637 2.8E-9 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 M892_17220 05c1a88065b9ed570badec82a0af6a34 878 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 742 788 1.2E-12 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 M892_17220 05c1a88065b9ed570badec82a0af6a34 878 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 644 688 8.9E-9 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 M892_17220 05c1a88065b9ed570badec82a0af6a34 878 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 792 838 2.7E-12 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 M892_17220 05c1a88065b9ed570badec82a0af6a34 878 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 692 736 2.6E-15 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 M892_17220 05c1a88065b9ed570badec82a0af6a34 878 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 505 5.4E-157 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 M892_17220 05c1a88065b9ed570badec82a0af6a34 878 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 1 840 24.594 T 12-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 M892_17220 05c1a88065b9ed570badec82a0af6a34 878 SMART SM00434 11 498 1.8E-298 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 M892_17220 05c1a88065b9ed570badec82a0af6a34 878 Gene3D G3DSA:1.10.268.10 369 492 4.9E-235 T 12-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 M892_17220 05c1a88065b9ed570badec82a0af6a34 878 SUPERFAMILY SSF101904 532 851 4.84E-114 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal M892_17220 05c1a88065b9ed570badec82a0af6a34 878 Gene3D G3DSA:3.90.199.10 33 520 4.9E-235 T 12-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 M892_17220 05c1a88065b9ed570badec82a0af6a34 878 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 838 0.0 T 12-10-2018 M892_20485 6634e5f539ce4d5c572246d9cdf94ef8 122 SUPERFAMILY SSF46785 17 119 2.51E-28 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_20485 6634e5f539ce4d5c572246d9cdf94ef8 122 Pfam PF01638 HxlR-like helix-turn-helix 31 116 2.5E-23 T 12-10-2018 IPR002577 Helix-turn-helix, HxlR type M892_20485 6634e5f539ce4d5c572246d9cdf94ef8 122 Gene3D G3DSA:1.10.10.10 5 122 3.6E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_25615 d0e45a6d56860c9fa254b49c5718cdb2 670 SUPERFAMILY SSF50993 19 386 1.86E-30 T 12-10-2018 M892_25615 d0e45a6d56860c9fa254b49c5718cdb2 670 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 490 509 3.8E-36 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 M892_25615 d0e45a6d56860c9fa254b49c5718cdb2 670 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 519 539 3.8E-36 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 M892_25615 d0e45a6d56860c9fa254b49c5718cdb2 670 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 462 486 3.8E-36 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 M892_25615 d0e45a6d56860c9fa254b49c5718cdb2 670 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 577 592 3.8E-36 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 M892_25615 d0e45a6d56860c9fa254b49c5718cdb2 670 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 436 454 3.8E-36 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 M892_25615 d0e45a6d56860c9fa254b49c5718cdb2 670 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 595 617 3.8E-36 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 M892_25615 d0e45a6d56860c9fa254b49c5718cdb2 670 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 18 388 1.6E-25 T 12-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 M892_25615 d0e45a6d56860c9fa254b49c5718cdb2 670 Gene3D G3DSA:3.40.50.1820 21 659 1.4E-146 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_25615 d0e45a6d56860c9fa254b49c5718cdb2 670 Gene3D G3DSA:2.130.10.120 72 396 1.4E-146 T 12-10-2018 M892_25615 d0e45a6d56860c9fa254b49c5718cdb2 670 Pfam PF00326 Prolyl oligopeptidase family 451 664 3.2E-56 T 12-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 M892_25615 d0e45a6d56860c9fa254b49c5718cdb2 670 SUPERFAMILY SSF53474 408 659 5.8E-39 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_07700 19b6d64bda02b0733d416815a05c2ee4 544 SUPERFAMILY SSF51645 22 543 2.75E-184 T 12-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 M892_07700 19b6d64bda02b0733d416815a05c2ee4 544 Gene3D G3DSA:3.20.20.360 12 422 8.0E-189 T 12-10-2018 M892_07700 19b6d64bda02b0733d416815a05c2ee4 544 PIRSF PIRSF001363 11 544 8.3E-250 T 12-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 M892_07700 19b6d64bda02b0733d416815a05c2ee4 544 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 34 543 4.0E-261 T 12-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 M892_07700 19b6d64bda02b0733d416815a05c2ee4 544 ProSitePatterns PS00510 Malate synthase signature. 277 292 - T 12-10-2018 IPR019830 Malate synthase, conserved site GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 M892_07700 19b6d64bda02b0733d416815a05c2ee4 544 Pfam PF01274 Malate synthase 25 543 1.4E-199 T 12-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 M892_07700 19b6d64bda02b0733d416815a05c2ee4 544 Gene3D G3DSA:1.20.1220.12 423 544 1.4E-47 T 12-10-2018 M892_12560 a957732323fc38bd97a3588dbbb01469 139 Pfam PF01894 Uncharacterised protein family UPF0047 19 135 1.1E-39 T 12-10-2018 IPR001602 Uncharacterised protein family UPF0047 M892_12560 a957732323fc38bd97a3588dbbb01469 139 PIRSF PIRSF004681 1 139 2.1E-47 T 12-10-2018 IPR001602 Uncharacterised protein family UPF0047 M892_12560 a957732323fc38bd97a3588dbbb01469 139 SUPERFAMILY SSF111038 1 139 2.09E-50 T 12-10-2018 IPR035917 YjbQ-like superfamily M892_12560 a957732323fc38bd97a3588dbbb01469 139 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature. 100 118 - T 12-10-2018 IPR001602 Uncharacterised protein family UPF0047 M892_12560 a957732323fc38bd97a3588dbbb01469 139 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 5 139 1.6E-45 T 12-10-2018 IPR001602 Uncharacterised protein family UPF0047 M892_12560 a957732323fc38bd97a3588dbbb01469 139 Gene3D G3DSA:2.60.120.460 2 139 2.2E-43 T 12-10-2018 IPR035917 YjbQ-like superfamily M892_15000 f25fbc237b3940bda2b61b0cc0cbf8ca 528 Pfam PF01476 LysM domain 420 463 8.7E-12 T 12-10-2018 IPR018392 LysM domain M892_15000 f25fbc237b3940bda2b61b0cc0cbf8ca 528 Pfam PF01476 LysM domain 346 388 4.6E-12 T 12-10-2018 IPR018392 LysM domain M892_15000 f25fbc237b3940bda2b61b0cc0cbf8ca 528 Pfam PF01476 LysM domain 477 519 5.5E-11 T 12-10-2018 IPR018392 LysM domain M892_15000 f25fbc237b3940bda2b61b0cc0cbf8ca 528 SUPERFAMILY SSF53955 114 269 5.63E-42 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily M892_15000 f25fbc237b3940bda2b61b0cc0cbf8ca 528 Gene3D G3DSA:3.10.350.10 474 522 6.6E-13 T 12-10-2018 IPR036779 LysM domain superfamily M892_15000 f25fbc237b3940bda2b61b0cc0cbf8ca 528 SUPERFAMILY SSF54106 345 388 4.05E-11 T 12-10-2018 M892_15000 f25fbc237b3940bda2b61b0cc0cbf8ca 528 SUPERFAMILY SSF54106 474 521 7.85E-10 T 12-10-2018 M892_15000 f25fbc237b3940bda2b61b0cc0cbf8ca 528 Gene3D G3DSA:3.10.350.10 331 398 1.3E-15 T 12-10-2018 IPR036779 LysM domain superfamily M892_15000 f25fbc237b3940bda2b61b0cc0cbf8ca 528 Gene3D G3DSA:3.10.350.10 404 471 3.1E-15 T 12-10-2018 IPR036779 LysM domain superfamily M892_15000 f25fbc237b3940bda2b61b0cc0cbf8ca 528 Gene3D G3DSA:1.10.530.10 111 262 1.1E-29 T 12-10-2018 M892_15000 f25fbc237b3940bda2b61b0cc0cbf8ca 528 SUPERFAMILY SSF54106 418 463 5.36E-11 T 12-10-2018 M892_15000 f25fbc237b3940bda2b61b0cc0cbf8ca 528 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 135 163 - T 12-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 M892_15000 f25fbc237b3940bda2b61b0cc0cbf8ca 528 Pfam PF01464 Transglycosylase SLT domain 127 228 5.4E-23 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 M892_15000 f25fbc237b3940bda2b61b0cc0cbf8ca 528 SMART SM00257 476 520 1.5E-9 T 12-10-2018 IPR018392 LysM domain M892_15000 f25fbc237b3940bda2b61b0cc0cbf8ca 528 SMART SM00257 419 463 2.5E-13 T 12-10-2018 IPR018392 LysM domain M892_15000 f25fbc237b3940bda2b61b0cc0cbf8ca 528 SMART SM00257 345 388 9.1E-14 T 12-10-2018 IPR018392 LysM domain M892_22190 53e1abb77f367d35ce65409e90a58fe4 483 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 85 94 - T 12-10-2018 IPR024002 Formate/nitrite transporter, conserved site M892_22190 53e1abb77f367d35ce65409e90a58fe4 483 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 16 281 1.0E-112 T 12-10-2018 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 M892_22190 53e1abb77f367d35ce65409e90a58fe4 483 Pfam PF00571 CBS domain 313 365 2.1E-8 T 12-10-2018 IPR000644 CBS domain M892_22190 53e1abb77f367d35ce65409e90a58fe4 483 Gene3D G3DSA:1.20.1080.10 4 270 1.9E-87 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 M892_22190 53e1abb77f367d35ce65409e90a58fe4 483 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 29 281 1.2E-75 T 12-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 M892_22190 53e1abb77f367d35ce65409e90a58fe4 483 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 170 180 - T 12-10-2018 IPR024002 Formate/nitrite transporter, conserved site M892_22190 53e1abb77f367d35ce65409e90a58fe4 483 SMART SM00116 320 368 0.0045 T 12-10-2018 IPR000644 CBS domain M892_22190 53e1abb77f367d35ce65409e90a58fe4 483 Pfam PF01226 Formate/nitrite transporter 17 277 6.9E-71 T 12-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 M892_22190 53e1abb77f367d35ce65409e90a58fe4 483 Gene3D G3DSA:3.10.580.10 308 465 2.2E-20 T 12-10-2018 M892_22190 53e1abb77f367d35ce65409e90a58fe4 483 SUPERFAMILY SSF54631 312 464 2.71E-19 T 12-10-2018 M892_08205 20598ed209ebb2824e43bfcba0888448 323 Hamap MF_00384 Homoserine kinase [thrB]. 10 319 28.936 T 12-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 M892_08205 20598ed209ebb2824e43bfcba0888448 323 TIGRFAM TIGR00191 thrB: homoserine kinase 10 319 1.4E-108 T 12-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 M892_08205 20598ed209ebb2824e43bfcba0888448 323 PRINTS PR00958 Homoserine kinase signature 108 123 1.0E-30 T 12-10-2018 M892_08205 20598ed209ebb2824e43bfcba0888448 323 PRINTS PR00958 Homoserine kinase signature 265 280 1.0E-30 T 12-10-2018 M892_08205 20598ed209ebb2824e43bfcba0888448 323 PRINTS PR00958 Homoserine kinase signature 15 30 1.0E-30 T 12-10-2018 M892_08205 20598ed209ebb2824e43bfcba0888448 323 PRINTS PR00958 Homoserine kinase signature 148 161 1.0E-30 T 12-10-2018 M892_08205 20598ed209ebb2824e43bfcba0888448 323 PRINTS PR00958 Homoserine kinase signature 186 203 1.0E-30 T 12-10-2018 M892_08205 20598ed209ebb2824e43bfcba0888448 323 Gene3D G3DSA:3.30.70.890 179 288 1.4E-88 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily M892_08205 20598ed209ebb2824e43bfcba0888448 323 PIRSF PIRSF000676 4 321 4.4E-80 T 12-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 M892_08205 20598ed209ebb2824e43bfcba0888448 323 SUPERFAMILY SSF54211 9 196 1.97E-34 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold M892_08205 20598ed209ebb2824e43bfcba0888448 323 Gene3D G3DSA:3.30.230.10 11 178 1.4E-88 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M892_08205 20598ed209ebb2824e43bfcba0888448 323 Pfam PF00288 GHMP kinases N terminal domain 95 161 1.8E-13 T 12-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 M892_08205 20598ed209ebb2824e43bfcba0888448 323 Pfam PF08544 GHMP kinases C terminal 223 296 2.0E-9 T 12-10-2018 IPR013750 GHMP kinase, C-terminal domain M892_08205 20598ed209ebb2824e43bfcba0888448 323 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 101 112 - T 12-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 M892_08205 20598ed209ebb2824e43bfcba0888448 323 SUPERFAMILY SSF55060 183 299 4.89E-33 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily M892_02370 637652065db93134f80f3386e58cce04 178 Gene3D G3DSA:2.10.10.20 124 168 3.2E-12 T 12-10-2018 M892_02370 637652065db93134f80f3386e58cce04 178 Gene3D G3DSA:2.60.40.10 26 123 2.1E-13 T 12-10-2018 IPR013783 Immunoglobulin-like fold M892_02370 637652065db93134f80f3386e58cce04 178 SUPERFAMILY SSF51055 124 171 4.32E-7 T 12-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 M892_12240 19718ec6213ed189bffd6b6f26aff790 289 Gene3D G3DSA:3.40.50.300 1 289 4.8E-111 T 12-10-2018 M892_12240 19718ec6213ed189bffd6b6f26aff790 289 SUPERFAMILY SSF52540 4 286 5.63E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_12240 19718ec6213ed189bffd6b6f26aff790 289 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 214 3.3E-70 T 12-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 M892_12240 19718ec6213ed189bffd6b6f26aff790 289 PRINTS PR00478 Phosphoribulokinase family signature 164 181 1.2E-27 T 12-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 M892_12240 19718ec6213ed189bffd6b6f26aff790 289 PRINTS PR00478 Phosphoribulokinase family signature 12 29 1.2E-27 T 12-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 M892_12240 19718ec6213ed189bffd6b6f26aff790 289 PRINTS PR00478 Phosphoribulokinase family signature 126 144 1.2E-27 T 12-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 M892_12240 19718ec6213ed189bffd6b6f26aff790 289 PRINTS PR00478 Phosphoribulokinase family signature 182 205 1.2E-27 T 12-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 M892_07765 45ca20cacf976c6789be2e82e913adfc 321 Gene3D G3DSA:3.40.190.10 38 309 1.6E-96 T 12-10-2018 M892_07765 45ca20cacf976c6789be2e82e913adfc 321 SUPERFAMILY SSF53850 36 318 7.03E-65 T 12-10-2018 M892_07765 45ca20cacf976c6789be2e82e913adfc 321 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 11 307 4.1E-75 T 12-10-2018 IPR011862 Phosphate binding protein GO:0042301 M892_07765 45ca20cacf976c6789be2e82e913adfc 321 Pfam PF12849 PBP superfamily domain 37 293 1.4E-27 T 12-10-2018 IPR024370 PBP domain M892_07765 45ca20cacf976c6789be2e82e913adfc 321 Gene3D G3DSA:3.40.190.10 123 265 1.6E-96 T 12-10-2018 M892_12370 8fcb49cdaca3ddcc1cb2a67012da68ca 425 SMART SM01274 28 161 2.2E-74 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 M892_12370 8fcb49cdaca3ddcc1cb2a67012da68ca 425 Gene3D G3DSA:3.40.50.720 171 425 2.2E-83 T 12-10-2018 M892_12370 8fcb49cdaca3ddcc1cb2a67012da68ca 425 SUPERFAMILY SSF53223 20 171 3.88E-52 T 12-10-2018 M892_12370 8fcb49cdaca3ddcc1cb2a67012da68ca 425 Gene3D G3DSA:3.40.50.10380 6 170 2.3E-66 T 12-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 M892_12370 8fcb49cdaca3ddcc1cb2a67012da68ca 425 PIRSF PIRSF000106 47 128 2.7E-10 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 M892_12370 8fcb49cdaca3ddcc1cb2a67012da68ca 425 PIRSF PIRSF000106 120 425 1.8E-62 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 M892_12370 8fcb49cdaca3ddcc1cb2a67012da68ca 425 SUPERFAMILY SSF51735 173 420 8.77E-81 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_12370 8fcb49cdaca3ddcc1cb2a67012da68ca 425 ProSitePatterns PS00331 Malic enzymes signature. 169 185 - T 12-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 M892_12370 8fcb49cdaca3ddcc1cb2a67012da68ca 425 Pfam PF03949 Malic enzyme, NAD binding domain 175 366 8.9E-26 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 M892_12370 8fcb49cdaca3ddcc1cb2a67012da68ca 425 SMART SM00919 173 409 3.8E-141 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 M892_12370 8fcb49cdaca3ddcc1cb2a67012da68ca 425 Pfam PF00390 Malic enzyme, N-terminal domain 30 124 2.5E-20 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 M892_19600 780160564fb5fa737bcd2d802504682a 195 Pfam PF13649 Methyltransferase domain 36 126 1.6E-8 T 12-10-2018 M892_19600 780160564fb5fa737bcd2d802504682a 195 Gene3D G3DSA:3.40.50.150 4 195 3.4E-19 T 12-10-2018 M892_19600 780160564fb5fa737bcd2d802504682a 195 SUPERFAMILY SSF53335 5 187 1.05E-21 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M892_23425 6dc0e960ba14a40aec43e131bbc77a50 128 SUPERFAMILY SSF54593 1 126 2.82E-36 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M892_23425 6dc0e960ba14a40aec43e131bbc77a50 128 Gene3D G3DSA:3.10.180.10 1 128 1.8E-46 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M892_23425 6dc0e960ba14a40aec43e131bbc77a50 128 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 123 1.9E-24 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain M892_23425 6dc0e960ba14a40aec43e131bbc77a50 128 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 12-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 M892_23425 6dc0e960ba14a40aec43e131bbc77a50 128 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 127 7.2E-58 T 12-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 M892_00165 5584db24d44c77f7b2029ec8f8d86703 198 SUPERFAMILY SSF46894 134 193 1.26E-17 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M892_00165 5584db24d44c77f7b2029ec8f8d86703 198 SUPERFAMILY SSF52172 9 126 4.98E-29 T 12-10-2018 IPR011006 CheY-like superfamily M892_00165 5584db24d44c77f7b2029ec8f8d86703 198 Gene3D G3DSA:3.40.50.2300 3 131 3.7E-34 T 12-10-2018 M892_00165 5584db24d44c77f7b2029ec8f8d86703 198 Pfam PF00196 Bacterial regulatory proteins, luxR family 138 193 7.2E-19 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_00165 5584db24d44c77f7b2029ec8f8d86703 198 SMART SM00448 6 117 1.6E-20 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_00165 5584db24d44c77f7b2029ec8f8d86703 198 Pfam PF00072 Response regulator receiver domain 9 117 2.0E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_00165 5584db24d44c77f7b2029ec8f8d86703 198 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 170 4.1E-13 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_00165 5584db24d44c77f7b2029ec8f8d86703 198 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 182 4.1E-13 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_00165 5584db24d44c77f7b2029ec8f8d86703 198 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 140 154 4.1E-13 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_00165 5584db24d44c77f7b2029ec8f8d86703 198 SMART SM00421 137 194 8.6E-21 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_00165 5584db24d44c77f7b2029ec8f8d86703 198 Gene3D G3DSA:1.10.10.10 132 194 1.4E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_00080 0b4c29be09d39a3650b2292cdaac3fb0 535 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 318 500 3.6E-44 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M892_00080 0b4c29be09d39a3650b2292cdaac3fb0 535 SUPERFAMILY SSF58104 230 534 2.62E-73 T 12-10-2018 M892_00080 0b4c29be09d39a3650b2292cdaac3fb0 535 Gene3D G3DSA:1.10.287.950 203 535 4.4E-74 T 12-10-2018 M892_00080 0b4c29be09d39a3650b2292cdaac3fb0 535 Pfam PF00672 HAMP domain 205 252 1.6E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M892_00080 0b4c29be09d39a3650b2292cdaac3fb0 535 SMART SM00283 272 533 4.8E-71 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M892_00080 0b4c29be09d39a3650b2292cdaac3fb0 535 SMART SM00304 204 257 9.2E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M892_13940 c4b849b672617bae8aa75df3a96248ce 639 Gene3D G3DSA:3.30.379.10 131 258 5.0E-21 T 12-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 M892_13940 c4b849b672617bae8aa75df3a96248ce 639 PIRSF PIRSF001093 194 638 1.2E-96 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 M892_13940 c4b849b672617bae8aa75df3a96248ce 639 PIRSF PIRSF001093 114 196 390.0 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 M892_13940 c4b849b672617bae8aa75df3a96248ce 639 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 139 256 2.0E-15 T 12-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal M892_13940 c4b849b672617bae8aa75df3a96248ce 639 Gene3D G3DSA:3.20.20.80 259 636 6.9E-137 T 12-10-2018 M892_13940 c4b849b672617bae8aa75df3a96248ce 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 283 304 4.9E-50 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 M892_13940 c4b849b672617bae8aa75df3a96248ce 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 217 237 4.9E-50 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 M892_13940 c4b849b672617bae8aa75df3a96248ce 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 589 606 4.9E-50 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 M892_13940 c4b849b672617bae8aa75df3a96248ce 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 402 420 4.9E-50 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 M892_13940 c4b849b672617bae8aa75df3a96248ce 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 571 587 4.9E-50 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 M892_13940 c4b849b672617bae8aa75df3a96248ce 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 424 437 4.9E-50 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 M892_13940 c4b849b672617bae8aa75df3a96248ce 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 254 271 4.9E-50 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 M892_13940 c4b849b672617bae8aa75df3a96248ce 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 353 370 4.9E-50 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 M892_13940 c4b849b672617bae8aa75df3a96248ce 639 SUPERFAMILY SSF55545 126 259 1.64E-23 T 12-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 M892_13940 c4b849b672617bae8aa75df3a96248ce 639 SUPERFAMILY SSF51445 260 620 3.91E-129 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily M892_13940 c4b849b672617bae8aa75df3a96248ce 639 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 260 607 8.7E-119 T 12-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 M892_15455 2f1525ce9ecd278ed3ffdbb9575074c9 435 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 16 433 1.4E-125 T 12-10-2018 IPR002155 Thiolase GO:0016747 M892_15455 2f1525ce9ecd278ed3ffdbb9575074c9 435 TIGRFAM TIGR02446 FadI: acetyl-CoA C-acyltransferase FadI 6 435 1.1E-264 T 12-10-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 M892_15455 2f1525ce9ecd278ed3ffdbb9575074c9 435 Gene3D G3DSA:3.40.47.10 4 434 3.8E-109 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M892_15455 2f1525ce9ecd278ed3ffdbb9575074c9 435 PIRSF PIRSF000429 8 435 6.2E-118 T 12-10-2018 IPR002155 Thiolase GO:0016747 M892_15455 2f1525ce9ecd278ed3ffdbb9575074c9 435 Pfam PF00108 Thiolase, N-terminal domain 14 286 2.3E-62 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 M892_15455 2f1525ce9ecd278ed3ffdbb9575074c9 435 SUPERFAMILY SSF53901 12 291 2.76E-59 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M892_15455 2f1525ce9ecd278ed3ffdbb9575074c9 435 ProSitePatterns PS00737 Thiolases signature 2. 381 397 - T 12-10-2018 IPR020613 Thiolase, conserved site GO:0016747 M892_15455 2f1525ce9ecd278ed3ffdbb9575074c9 435 Pfam PF02803 Thiolase, C-terminal domain 296 433 1.9E-35 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 M892_15455 2f1525ce9ecd278ed3ffdbb9575074c9 435 SUPERFAMILY SSF53901 296 434 2.04E-30 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M892_23050 49d1b8d2b9425e014ae529fdabf8293c 398 Gene3D G3DSA:3.90.1150.10 14 392 1.3E-137 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M892_23050 49d1b8d2b9425e014ae529fdabf8293c 398 Pfam PF00155 Aminotransferase class I and II 30 392 1.8E-66 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 M892_23050 49d1b8d2b9425e014ae529fdabf8293c 398 Gene3D G3DSA:3.40.640.10 48 315 1.3E-137 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M892_23050 49d1b8d2b9425e014ae529fdabf8293c 398 PRINTS PR00799 Aspartate aminotransferase signature 273 298 5.3E-28 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 M892_23050 49d1b8d2b9425e014ae529fdabf8293c 398 PRINTS PR00799 Aspartate aminotransferase signature 206 218 5.3E-28 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 M892_23050 49d1b8d2b9425e014ae529fdabf8293c 398 PRINTS PR00799 Aspartate aminotransferase signature 175 194 5.3E-28 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 M892_23050 49d1b8d2b9425e014ae529fdabf8293c 398 PRINTS PR00799 Aspartate aminotransferase signature 341 359 5.3E-28 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 M892_23050 49d1b8d2b9425e014ae529fdabf8293c 398 SUPERFAMILY SSF53383 1 398 3.63E-101 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M892_23585 e1c1851cbeb47fc065705672d4448736 347 SUPERFAMILY SSF53098 223 318 2.28E-7 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_23585 e1c1851cbeb47fc065705672d4448736 347 Gene3D G3DSA:3.30.420.470 137 342 2.0E-12 T 12-10-2018 M892_23585 e1c1851cbeb47fc065705672d4448736 347 Pfam PF13592 Winged helix-turn helix 99 155 4.0E-19 T 12-10-2018 IPR025959 Winged helix-turn helix domain M892_23585 e1c1851cbeb47fc065705672d4448736 347 Pfam PF13358 DDE superfamily endonuclease 169 312 6.1E-35 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_23585 e1c1851cbeb47fc065705672d4448736 347 SUPERFAMILY SSF46689 16 131 1.43E-23 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_23585 e1c1851cbeb47fc065705672d4448736 347 Pfam PF13384 Homeodomain-like domain 28 67 9.4E-8 T 12-10-2018 M892_17925 e1c1851cbeb47fc065705672d4448736 347 SUPERFAMILY SSF53098 223 318 2.28E-7 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_17925 e1c1851cbeb47fc065705672d4448736 347 Gene3D G3DSA:3.30.420.470 137 342 2.0E-12 T 12-10-2018 M892_17925 e1c1851cbeb47fc065705672d4448736 347 Pfam PF13592 Winged helix-turn helix 99 155 4.0E-19 T 12-10-2018 IPR025959 Winged helix-turn helix domain M892_17925 e1c1851cbeb47fc065705672d4448736 347 Pfam PF13358 DDE superfamily endonuclease 169 312 6.1E-35 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_17925 e1c1851cbeb47fc065705672d4448736 347 SUPERFAMILY SSF46689 16 131 1.43E-23 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_17925 e1c1851cbeb47fc065705672d4448736 347 Pfam PF13384 Homeodomain-like domain 28 67 9.4E-8 T 12-10-2018 M892_27655 e1c1851cbeb47fc065705672d4448736 347 SUPERFAMILY SSF53098 223 318 2.28E-7 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_27655 e1c1851cbeb47fc065705672d4448736 347 Gene3D G3DSA:3.30.420.470 137 342 2.0E-12 T 12-10-2018 M892_27655 e1c1851cbeb47fc065705672d4448736 347 Pfam PF13592 Winged helix-turn helix 99 155 4.0E-19 T 12-10-2018 IPR025959 Winged helix-turn helix domain M892_27655 e1c1851cbeb47fc065705672d4448736 347 Pfam PF13358 DDE superfamily endonuclease 169 312 6.1E-35 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_27655 e1c1851cbeb47fc065705672d4448736 347 SUPERFAMILY SSF46689 16 131 1.43E-23 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_27655 e1c1851cbeb47fc065705672d4448736 347 Pfam PF13384 Homeodomain-like domain 28 67 9.4E-8 T 12-10-2018 M892_21855 e1c1851cbeb47fc065705672d4448736 347 SUPERFAMILY SSF53098 223 318 2.28E-7 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_21855 e1c1851cbeb47fc065705672d4448736 347 Gene3D G3DSA:3.30.420.470 137 342 2.0E-12 T 12-10-2018 M892_21855 e1c1851cbeb47fc065705672d4448736 347 Pfam PF13592 Winged helix-turn helix 99 155 4.0E-19 T 12-10-2018 IPR025959 Winged helix-turn helix domain M892_21855 e1c1851cbeb47fc065705672d4448736 347 Pfam PF13358 DDE superfamily endonuclease 169 312 6.1E-35 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_21855 e1c1851cbeb47fc065705672d4448736 347 SUPERFAMILY SSF46689 16 131 1.43E-23 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_21855 e1c1851cbeb47fc065705672d4448736 347 Pfam PF13384 Homeodomain-like domain 28 67 9.4E-8 T 12-10-2018 M892_19070 e1c1851cbeb47fc065705672d4448736 347 SUPERFAMILY SSF53098 223 318 2.28E-7 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_19070 e1c1851cbeb47fc065705672d4448736 347 Gene3D G3DSA:3.30.420.470 137 342 2.0E-12 T 12-10-2018 M892_19070 e1c1851cbeb47fc065705672d4448736 347 Pfam PF13592 Winged helix-turn helix 99 155 4.0E-19 T 12-10-2018 IPR025959 Winged helix-turn helix domain M892_19070 e1c1851cbeb47fc065705672d4448736 347 Pfam PF13358 DDE superfamily endonuclease 169 312 6.1E-35 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_19070 e1c1851cbeb47fc065705672d4448736 347 SUPERFAMILY SSF46689 16 131 1.43E-23 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_19070 e1c1851cbeb47fc065705672d4448736 347 Pfam PF13384 Homeodomain-like domain 28 67 9.4E-8 T 12-10-2018 M892_19695 e1c1851cbeb47fc065705672d4448736 347 SUPERFAMILY SSF53098 223 318 2.28E-7 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_19695 e1c1851cbeb47fc065705672d4448736 347 Gene3D G3DSA:3.30.420.470 137 342 2.0E-12 T 12-10-2018 M892_19695 e1c1851cbeb47fc065705672d4448736 347 Pfam PF13592 Winged helix-turn helix 99 155 4.0E-19 T 12-10-2018 IPR025959 Winged helix-turn helix domain M892_19695 e1c1851cbeb47fc065705672d4448736 347 Pfam PF13358 DDE superfamily endonuclease 169 312 6.1E-35 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_19695 e1c1851cbeb47fc065705672d4448736 347 SUPERFAMILY SSF46689 16 131 1.43E-23 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_19695 e1c1851cbeb47fc065705672d4448736 347 Pfam PF13384 Homeodomain-like domain 28 67 9.4E-8 T 12-10-2018 M892_21485 e1c1851cbeb47fc065705672d4448736 347 SUPERFAMILY SSF53098 223 318 2.28E-7 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_21485 e1c1851cbeb47fc065705672d4448736 347 Gene3D G3DSA:3.30.420.470 137 342 2.0E-12 T 12-10-2018 M892_21485 e1c1851cbeb47fc065705672d4448736 347 Pfam PF13592 Winged helix-turn helix 99 155 4.0E-19 T 12-10-2018 IPR025959 Winged helix-turn helix domain M892_21485 e1c1851cbeb47fc065705672d4448736 347 Pfam PF13358 DDE superfamily endonuclease 169 312 6.1E-35 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_21485 e1c1851cbeb47fc065705672d4448736 347 SUPERFAMILY SSF46689 16 131 1.43E-23 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_21485 e1c1851cbeb47fc065705672d4448736 347 Pfam PF13384 Homeodomain-like domain 28 67 9.4E-8 T 12-10-2018 M892_00050 e1c1851cbeb47fc065705672d4448736 347 SUPERFAMILY SSF53098 223 318 2.28E-7 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_00050 e1c1851cbeb47fc065705672d4448736 347 Gene3D G3DSA:3.30.420.470 137 342 2.0E-12 T 12-10-2018 M892_00050 e1c1851cbeb47fc065705672d4448736 347 Pfam PF13592 Winged helix-turn helix 99 155 4.0E-19 T 12-10-2018 IPR025959 Winged helix-turn helix domain M892_00050 e1c1851cbeb47fc065705672d4448736 347 Pfam PF13358 DDE superfamily endonuclease 169 312 6.1E-35 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_00050 e1c1851cbeb47fc065705672d4448736 347 SUPERFAMILY SSF46689 16 131 1.43E-23 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_00050 e1c1851cbeb47fc065705672d4448736 347 Pfam PF13384 Homeodomain-like domain 28 67 9.4E-8 T 12-10-2018 M892_26790 e1c1851cbeb47fc065705672d4448736 347 SUPERFAMILY SSF53098 223 318 2.28E-7 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_26790 e1c1851cbeb47fc065705672d4448736 347 Gene3D G3DSA:3.30.420.470 137 342 2.0E-12 T 12-10-2018 M892_26790 e1c1851cbeb47fc065705672d4448736 347 Pfam PF13592 Winged helix-turn helix 99 155 4.0E-19 T 12-10-2018 IPR025959 Winged helix-turn helix domain M892_26790 e1c1851cbeb47fc065705672d4448736 347 Pfam PF13358 DDE superfamily endonuclease 169 312 6.1E-35 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_26790 e1c1851cbeb47fc065705672d4448736 347 SUPERFAMILY SSF46689 16 131 1.43E-23 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_26790 e1c1851cbeb47fc065705672d4448736 347 Pfam PF13384 Homeodomain-like domain 28 67 9.4E-8 T 12-10-2018 M892_23165 e1c1851cbeb47fc065705672d4448736 347 SUPERFAMILY SSF53098 223 318 2.28E-7 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_23165 e1c1851cbeb47fc065705672d4448736 347 Gene3D G3DSA:3.30.420.470 137 342 2.0E-12 T 12-10-2018 M892_23165 e1c1851cbeb47fc065705672d4448736 347 Pfam PF13592 Winged helix-turn helix 99 155 4.0E-19 T 12-10-2018 IPR025959 Winged helix-turn helix domain M892_23165 e1c1851cbeb47fc065705672d4448736 347 Pfam PF13358 DDE superfamily endonuclease 169 312 6.1E-35 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_23165 e1c1851cbeb47fc065705672d4448736 347 SUPERFAMILY SSF46689 16 131 1.43E-23 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_23165 e1c1851cbeb47fc065705672d4448736 347 Pfam PF13384 Homeodomain-like domain 28 67 9.4E-8 T 12-10-2018 M892_25815 e1c1851cbeb47fc065705672d4448736 347 SUPERFAMILY SSF53098 223 318 2.28E-7 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_25815 e1c1851cbeb47fc065705672d4448736 347 Gene3D G3DSA:3.30.420.470 137 342 2.0E-12 T 12-10-2018 M892_25815 e1c1851cbeb47fc065705672d4448736 347 Pfam PF13592 Winged helix-turn helix 99 155 4.0E-19 T 12-10-2018 IPR025959 Winged helix-turn helix domain M892_25815 e1c1851cbeb47fc065705672d4448736 347 Pfam PF13358 DDE superfamily endonuclease 169 312 6.1E-35 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_25815 e1c1851cbeb47fc065705672d4448736 347 SUPERFAMILY SSF46689 16 131 1.43E-23 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_25815 e1c1851cbeb47fc065705672d4448736 347 Pfam PF13384 Homeodomain-like domain 28 67 9.4E-8 T 12-10-2018 M892_21435 c83bd014b5373c6814ab6fa3c8138d6f 145 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 10 90 2.7E-25 T 12-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_21435 c83bd014b5373c6814ab6fa3c8138d6f 145 Gene3D G3DSA:1.20.5.440 97 140 3.7E-15 T 12-10-2018 M892_21435 c83bd014b5373c6814ab6fa3c8138d6f 145 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 15 93 1.0E-26 T 12-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_21435 c83bd014b5373c6814ab6fa3c8138d6f 145 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 8 137 20.814 T 12-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_21435 c83bd014b5373c6814ab6fa3c8138d6f 145 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 94 138 3.2E-9 T 12-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain M892_21435 c83bd014b5373c6814ab6fa3c8138d6f 145 SUPERFAMILY SSF51344 8 92 3.27E-21 T 12-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_21435 c83bd014b5373c6814ab6fa3c8138d6f 145 Gene3D G3DSA:2.60.15.10 8 96 3.7E-26 T 12-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_21435 c83bd014b5373c6814ab6fa3c8138d6f 145 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 9 139 2.1E-38 T 12-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_21435 c83bd014b5373c6814ab6fa3c8138d6f 145 SUPERFAMILY SSF46604 94 141 2.62E-11 T 12-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_13465 fd49f920c290434e10dfdc4c9d1b9d04 739 Gene3D G3DSA:3.30.460.10 208 340 2.4E-48 T 12-10-2018 M892_13465 fd49f920c290434e10dfdc4c9d1b9d04 739 SUPERFAMILY SSF81271 395 461 5.01E-21 T 12-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 M892_13465 fd49f920c290434e10dfdc4c9d1b9d04 739 SUPERFAMILY SSF55021 662 737 4.21E-10 T 12-10-2018 M892_13465 fd49f920c290434e10dfdc4c9d1b9d04 739 SUPERFAMILY SSF109604 53 205 1.85E-41 T 12-10-2018 M892_13465 fd49f920c290434e10dfdc4c9d1b9d04 739 Pfam PF13291 ACT domain 661 737 4.4E-15 T 12-10-2018 IPR002912 ACT domain M892_13465 fd49f920c290434e10dfdc4c9d1b9d04 739 Pfam PF13328 HD domain 52 190 6.7E-35 T 12-10-2018 IPR003607 HD/PDEase domain M892_13465 fd49f920c290434e10dfdc4c9d1b9d04 739 SUPERFAMILY SSF81301 195 406 3.43E-62 T 12-10-2018 M892_13465 fd49f920c290434e10dfdc4c9d1b9d04 739 Gene3D G3DSA:3.30.70.260 660 739 1.1E-14 T 12-10-2018 M892_13465 fd49f920c290434e10dfdc4c9d1b9d04 739 Gene3D G3DSA:3.10.20.30 396 469 4.9E-31 T 12-10-2018 IPR012675 Beta-grasp domain superfamily M892_13465 fd49f920c290434e10dfdc4c9d1b9d04 739 SMART SM00954 250 360 8.8E-65 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 M892_13465 fd49f920c290434e10dfdc4c9d1b9d04 739 Gene3D G3DSA:1.10.3210.10 44 205 1.4E-34 T 12-10-2018 M892_13465 fd49f920c290434e10dfdc4c9d1b9d04 739 Pfam PF04607 Region found in RelA / SpoT proteins 250 359 1.6E-36 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 M892_13465 fd49f920c290434e10dfdc4c9d1b9d04 739 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 64 737 3.3E-183 T 12-10-2018 IPR004811 RelA/SpoT family GO:0015969 M892_13465 fd49f920c290434e10dfdc4c9d1b9d04 739 Pfam PF02824 TGS domain 402 461 1.0E-21 T 12-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 M892_23705 445dc19efd6f4b77ac7ca709f050b241 592 SUPERFAMILY SSF49785 438 592 3.19E-25 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily M892_23705 445dc19efd6f4b77ac7ca709f050b241 592 Gene3D G3DSA:3.40.50.200 19 434 2.8E-99 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 M892_23705 445dc19efd6f4b77ac7ca709f050b241 592 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 70 81 - T 12-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site M892_23705 445dc19efd6f4b77ac7ca709f050b241 592 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 112 122 - T 12-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site M892_23705 445dc19efd6f4b77ac7ca709f050b241 592 SUPERFAMILY SSF52743 23 432 1.03E-58 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 M892_23705 445dc19efd6f4b77ac7ca709f050b241 592 Pfam PF01483 Proprotein convertase P-domain 475 556 2.9E-20 T 12-10-2018 IPR002884 P domain GO:0004252|GO:0006508 M892_23705 445dc19efd6f4b77ac7ca709f050b241 592 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 339 349 - T 12-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site M892_23705 445dc19efd6f4b77ac7ca709f050b241 592 PRINTS PR00723 Subtilisin serine protease family (S8) signature 108 121 2.4E-17 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related M892_23705 445dc19efd6f4b77ac7ca709f050b241 592 PRINTS PR00723 Subtilisin serine protease family (S8) signature 338 354 2.4E-17 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related M892_23705 445dc19efd6f4b77ac7ca709f050b241 592 PRINTS PR00723 Subtilisin serine protease family (S8) signature 65 84 2.4E-17 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related M892_23705 445dc19efd6f4b77ac7ca709f050b241 592 Pfam PF00082 Subtilase family 65 382 1.2E-31 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 M892_23705 445dc19efd6f4b77ac7ca709f050b241 592 Gene3D G3DSA:2.60.120.260 438 592 1.2E-50 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily M892_20340 2514487eabd575b776a94abc644916ea 577 SUPERFAMILY SSF111369 133 324 8.37E-18 T 12-10-2018 M892_20340 2514487eabd575b776a94abc644916ea 577 Gene3D G3DSA:2.40.420.20 326 415 1.3E-21 T 12-10-2018 M892_20340 2514487eabd575b776a94abc644916ea 577 Gene3D G3DSA:2.40.420.20 102 113 5.4E-10 T 12-10-2018 M892_20340 2514487eabd575b776a94abc644916ea 577 Gene3D G3DSA:2.40.30.170 247 320 2.0E-29 T 12-10-2018 M892_20340 2514487eabd575b776a94abc644916ea 577 Pfam PF11604 Copper binding periplasmic protein CusF 419 484 1.5E-22 T 12-10-2018 IPR021647 Copper binding periplasmic protein CusF M892_20340 2514487eabd575b776a94abc644916ea 577 Pfam PF11604 Copper binding periplasmic protein CusF 504 568 5.6E-19 T 12-10-2018 IPR021647 Copper binding periplasmic protein CusF M892_20340 2514487eabd575b776a94abc644916ea 577 Gene3D G3DSA:1.10.287.470 163 175 5.4E-10 T 12-10-2018 M892_20340 2514487eabd575b776a94abc644916ea 577 Gene3D G3DSA:2.40.50.100 205 246 2.0E-29 T 12-10-2018 M892_20340 2514487eabd575b776a94abc644916ea 577 Gene3D G3DSA:2.40.30.170 114 127 5.4E-10 T 12-10-2018 M892_20340 2514487eabd575b776a94abc644916ea 577 Gene3D G3DSA:2.40.50.100 128 162 5.4E-10 T 12-10-2018 M892_20340 2514487eabd575b776a94abc644916ea 577 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 111 319 1.1E-78 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain M892_20340 2514487eabd575b776a94abc644916ea 577 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 208 392 6.5E-35 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 M892_20340 2514487eabd575b776a94abc644916ea 577 Gene3D G3DSA:2.40.50.320 416 486 7.2E-20 T 12-10-2018 M892_20340 2514487eabd575b776a94abc644916ea 577 Gene3D G3DSA:2.40.50.320 500 570 7.0E-16 T 12-10-2018 M892_00820 58ebc18842215b11f05ae2bc4dcb9d22 579 Gene3D G3DSA:1.20.1560.10 3 319 3.1E-75 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 M892_00820 58ebc18842215b11f05ae2bc4dcb9d22 579 Pfam PF00664 ABC transporter transmembrane region 21 291 2.3E-43 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 M892_00820 58ebc18842215b11f05ae2bc4dcb9d22 579 SMART SM00382 361 547 1.9E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_00820 58ebc18842215b11f05ae2bc4dcb9d22 579 Pfam PF00005 ABC transporter 352 500 1.3E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_00820 58ebc18842215b11f05ae2bc4dcb9d22 579 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_00820 58ebc18842215b11f05ae2bc4dcb9d22 579 SUPERFAMILY SSF52540 335 571 2.13E-76 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_00820 58ebc18842215b11f05ae2bc4dcb9d22 579 Gene3D G3DSA:3.40.50.300 335 579 2.0E-74 T 12-10-2018 M892_00820 58ebc18842215b11f05ae2bc4dcb9d22 579 SUPERFAMILY SSF90123 7 320 5.89E-73 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 M892_08210 5170de2ef8f723ad18e45747a9d1e48c 819 SUPERFAMILY SSF51735 463 636 1.79E-37 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_08210 5170de2ef8f723ad18e45747a9d1e48c 819 Gene3D G3DSA:3.40.1160.10 3 295 1.8E-86 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily M892_08210 5170de2ef8f723ad18e45747a9d1e48c 819 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 460 1.6E-132 T 12-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 M892_08210 5170de2ef8f723ad18e45747a9d1e48c 819 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 12-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 M892_08210 5170de2ef8f723ad18e45747a9d1e48c 819 Pfam PF00696 Amino acid kinase family 2 284 4.1E-51 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 M892_08210 5170de2ef8f723ad18e45747a9d1e48c 819 Gene3D G3DSA:1.20.120.1320 41 142 1.8E-86 T 12-10-2018 M892_08210 5170de2ef8f723ad18e45747a9d1e48c 819 Gene3D G3DSA:3.40.50.720 467 811 9.6E-120 T 12-10-2018 M892_08210 5170de2ef8f723ad18e45747a9d1e48c 819 SUPERFAMILY SSF55347 614 797 7.19E-51 T 12-10-2018 M892_08210 5170de2ef8f723ad18e45747a9d1e48c 819 PIRSF PIRSF000727 1 817 0.0 T 12-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 M892_08210 5170de2ef8f723ad18e45747a9d1e48c 819 SUPERFAMILY SSF55021 303 381 2.0E-22 T 12-10-2018 M892_08210 5170de2ef8f723ad18e45747a9d1e48c 819 Pfam PF13840 ACT domain 393 456 1.9E-7 T 12-10-2018 IPR027795 CASTOR, ACT domain M892_08210 5170de2ef8f723ad18e45747a9d1e48c 819 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 472 606 2.3E-26 T 12-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 M892_08210 5170de2ef8f723ad18e45747a9d1e48c 819 Gene3D G3DSA:3.30.360.10 625 795 9.6E-120 T 12-10-2018 M892_08210 5170de2ef8f723ad18e45747a9d1e48c 819 Pfam PF01842 ACT domain 324 379 7.8E-10 T 12-10-2018 IPR002912 ACT domain M892_08210 5170de2ef8f723ad18e45747a9d1e48c 819 Gene3D G3DSA:3.30.2130.10 302 464 3.4E-46 T 12-10-2018 M892_08210 5170de2ef8f723ad18e45747a9d1e48c 819 SUPERFAMILY SSF53633 1 298 1.23E-76 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily M892_08210 5170de2ef8f723ad18e45747a9d1e48c 819 Pfam PF00742 Homoserine dehydrogenase 614 810 3.4E-47 T 12-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 M892_08210 5170de2ef8f723ad18e45747a9d1e48c 819 SUPERFAMILY SSF55021 383 476 5.15E-22 T 12-10-2018 M892_08210 5170de2ef8f723ad18e45747a9d1e48c 819 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 660 682 - T 12-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 M892_05475 955a1e55bfd8119f095e6c55b7362944 1153 Pfam PF00271 Helicase conserved C-terminal domain 808 909 3.1E-16 T 12-10-2018 IPR001650 Helicase, C-terminal M892_05475 955a1e55bfd8119f095e6c55b7362944 1153 SUPERFAMILY SSF52540 352 466 2.66E-27 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_05475 955a1e55bfd8119f095e6c55b7362944 1153 SUPERFAMILY SSF52540 782 990 4.13E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_05475 955a1e55bfd8119f095e6c55b7362944 1153 Pfam PF00270 DEAD/DEAH box helicase 605 765 1.5E-20 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 M892_05475 955a1e55bfd8119f095e6c55b7362944 1153 SMART SM00490 826 910 2.0E-18 T 12-10-2018 IPR001650 Helicase, C-terminal M892_05475 955a1e55bfd8119f095e6c55b7362944 1153 Gene3D G3DSA:3.40.50.300 542 781 5.1E-236 T 12-10-2018 M892_05475 955a1e55bfd8119f095e6c55b7362944 1153 Gene3D G3DSA:3.40.50.300 478 990 5.1E-236 T 12-10-2018 M892_05475 955a1e55bfd8119f095e6c55b7362944 1153 Gene3D G3DSA:3.30.2060.10 130 215 1.9E-122 T 12-10-2018 M892_05475 955a1e55bfd8119f095e6c55b7362944 1153 Gene3D G3DSA:3.40.50.11140 355 453 7.7E-31 T 12-10-2018 M892_05475 955a1e55bfd8119f095e6c55b7362944 1153 Pfam PF02559 CarD-like/TRCF domain 480 575 3.0E-26 T 12-10-2018 IPR003711 CarD-like/TRCF domain M892_05475 955a1e55bfd8119f095e6c55b7362944 1153 Gene3D G3DSA:3.40.50.11180 26 334 1.9E-122 T 12-10-2018 M892_05475 955a1e55bfd8119f095e6c55b7362944 1153 SUPERFAMILY SSF143517 997 1146 2.48E-42 T 12-10-2018 IPR037235 TRCF-like, C-terminal domain M892_05475 955a1e55bfd8119f095e6c55b7362944 1153 SMART SM01058 479 576 8.6E-53 T 12-10-2018 IPR003711 CarD-like/TRCF domain M892_05475 955a1e55bfd8119f095e6c55b7362944 1153 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 148 1081 0.0 T 12-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 M892_05475 955a1e55bfd8119f095e6c55b7362944 1153 SUPERFAMILY SSF52540 11 341 1.43E-100 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_05475 955a1e55bfd8119f095e6c55b7362944 1153 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 38 1108 27.898 T 12-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 M892_05475 955a1e55bfd8119f095e6c55b7362944 1153 Gene3D G3DSA:2.30.30.840 483 541 5.1E-236 T 12-10-2018 M892_05475 955a1e55bfd8119f095e6c55b7362944 1153 SUPERFAMILY SSF52540 523 783 5.48E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_05475 955a1e55bfd8119f095e6c55b7362944 1153 Gene3D G3DSA:3.90.1150.50 1004 1150 5.0E-44 T 12-10-2018 IPR037235 TRCF-like, C-terminal domain M892_05475 955a1e55bfd8119f095e6c55b7362944 1153 SMART SM00487 600 790 2.6E-33 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain M892_05475 955a1e55bfd8119f095e6c55b7362944 1153 Pfam PF03461 TRCF domain 1010 1101 1.1E-26 T 12-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 M892_05475 955a1e55bfd8119f095e6c55b7362944 1153 SMART SM00982 1008 1108 8.8E-45 T 12-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 M892_05475 955a1e55bfd8119f095e6c55b7362944 1153 SUPERFAMILY SSF141259 470 548 8.11E-25 T 12-10-2018 IPR036101 CarD-like/TRCF domain superfamily M892_27070 d583fd5ebe156c45f49957186f4e9bf8 345 SUPERFAMILY SSF49401 206 344 3.23E-6 T 12-10-2018 IPR008966 Adhesion domain superfamily M892_27070 d583fd5ebe156c45f49957186f4e9bf8 345 Gene3D G3DSA:2.60.40.1090 202 344 6.8E-5 T 12-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 M892_16225 9b7fbe34b14eb5d9c9f50794bd99ac19 151 Pfam PF02391 MoaE protein 7 119 2.4E-36 T 12-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 M892_16225 9b7fbe34b14eb5d9c9f50794bd99ac19 151 SUPERFAMILY SSF54690 4 149 3.92E-55 T 12-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 M892_16225 9b7fbe34b14eb5d9c9f50794bd99ac19 151 Gene3D G3DSA:3.90.1170.40 1 149 1.0E-53 T 12-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 M892_09395 fd0c429864afe380bc4c0b26423e8757 422 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 330 421 8.0E-15 T 12-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 M892_09395 fd0c429864afe380bc4c0b26423e8757 422 Gene3D G3DSA:3.40.50.720 2 209 6.7E-62 T 12-10-2018 M892_09395 fd0c429864afe380bc4c0b26423e8757 422 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 5 192 3.3E-55 T 12-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 M892_09395 fd0c429864afe380bc4c0b26423e8757 422 SUPERFAMILY SSF48179 211 304 2.72E-27 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 M892_09395 fd0c429864afe380bc4c0b26423e8757 422 PIRSF PIRSF500136 1 422 1.1E-144 T 12-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 M892_09395 fd0c429864afe380bc4c0b26423e8757 422 SUPERFAMILY SSF52413 318 420 1.44E-19 T 12-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 M892_09395 fd0c429864afe380bc4c0b26423e8757 422 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 211 298 3.5E-26 T 12-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 M892_09395 fd0c429864afe380bc4c0b26423e8757 422 Gene3D G3DSA:3.40.50.720 210 422 1.3E-54 T 12-10-2018 M892_09395 fd0c429864afe380bc4c0b26423e8757 422 SMART SM00984 330 422 3.9E-18 T 12-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 M892_09395 fd0c429864afe380bc4c0b26423e8757 422 SUPERFAMILY SSF51735 5 203 9.06E-42 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_09395 fd0c429864afe380bc4c0b26423e8757 422 PIRSF PIRSF000124 4 420 2.5E-69 T 12-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 M892_09395 fd0c429864afe380bc4c0b26423e8757 422 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 5 406 4.6E-113 T 12-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 M892_09735 1f30b34a06550ca6b7d6182e801322cc 221 Hamap MF_00105 Transcription elongation factor GreA [greA]. 62 215 28.109 T 12-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 M892_09735 1f30b34a06550ca6b7d6182e801322cc 221 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 141 216 5.8E-22 T 12-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 M892_09735 1f30b34a06550ca6b7d6182e801322cc 221 Gene3D G3DSA:1.10.287.180 61 136 1.1E-31 T 12-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 M892_09735 1f30b34a06550ca6b7d6182e801322cc 221 Hamap MF_00930 Transcription elongation factor GreB [greB]. 61 217 53.908 T 12-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 M892_09735 1f30b34a06550ca6b7d6182e801322cc 221 Gene3D G3DSA:3.10.50.30 137 219 8.5E-31 T 12-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 M892_09735 1f30b34a06550ca6b7d6182e801322cc 221 SUPERFAMILY SSF54534 140 217 9.03E-19 T 12-10-2018 M892_09735 1f30b34a06550ca6b7d6182e801322cc 221 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 180 196 - T 12-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 M892_09735 1f30b34a06550ca6b7d6182e801322cc 221 SUPERFAMILY SSF46557 63 138 1.57E-27 T 12-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 M892_09735 1f30b34a06550ca6b7d6182e801322cc 221 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 62 217 5.0E-76 T 12-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 M892_09735 1f30b34a06550ca6b7d6182e801322cc 221 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 77 108 - T 12-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 M892_09735 1f30b34a06550ca6b7d6182e801322cc 221 Pfam PF03449 Transcription elongation factor, N-terminal 65 134 7.0E-26 T 12-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 M892_18780 75d0bb737dcf9d5cd1f897fef8ae4284 311 PRINTS PR00690 Adhesin family signature 242 260 1.5E-7 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 M892_18780 75d0bb737dcf9d5cd1f897fef8ae4284 311 PRINTS PR00690 Adhesin family signature 62 75 1.5E-7 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 M892_18780 75d0bb737dcf9d5cd1f897fef8ae4284 311 PRINTS PR00690 Adhesin family signature 75 92 1.5E-7 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 M892_18780 75d0bb737dcf9d5cd1f897fef8ae4284 311 PRINTS PR00690 Adhesin family signature 189 210 1.5E-7 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 M892_18780 75d0bb737dcf9d5cd1f897fef8ae4284 311 Gene3D G3DSA:3.40.50.1980 34 183 2.5E-33 T 12-10-2018 M892_18780 75d0bb737dcf9d5cd1f897fef8ae4284 311 Pfam PF01297 Zinc-uptake complex component A periplasmic 37 297 8.9E-47 T 12-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 M892_18780 75d0bb737dcf9d5cd1f897fef8ae4284 311 PRINTS PR00691 Adhesin B signature 131 150 3.7E-10 T 12-10-2018 IPR006129 Adhesin B GO:0007155 M892_18780 75d0bb737dcf9d5cd1f897fef8ae4284 311 PRINTS PR00691 Adhesin B signature 75 94 3.7E-10 T 12-10-2018 IPR006129 Adhesin B GO:0007155 M892_18780 75d0bb737dcf9d5cd1f897fef8ae4284 311 PRINTS PR00691 Adhesin B signature 56 74 3.7E-10 T 12-10-2018 IPR006129 Adhesin B GO:0007155 M892_18780 75d0bb737dcf9d5cd1f897fef8ae4284 311 PRINTS PR00691 Adhesin B signature 238 255 3.7E-10 T 12-10-2018 IPR006129 Adhesin B GO:0007155 M892_18780 75d0bb737dcf9d5cd1f897fef8ae4284 311 PRINTS PR00691 Adhesin B signature 31 52 3.7E-10 T 12-10-2018 IPR006129 Adhesin B GO:0007155 M892_18780 75d0bb737dcf9d5cd1f897fef8ae4284 311 Gene3D G3DSA:3.40.50.1980 194 300 5.1E-20 T 12-10-2018 M892_18780 75d0bb737dcf9d5cd1f897fef8ae4284 311 SUPERFAMILY SSF53807 30 300 2.5E-65 T 12-10-2018 M892_05420 11744c7f99da5162ce64bddae03def32 519 Pfam PF04293 SpoVR like protein 26 456 3.5E-177 T 12-10-2018 IPR007390 Sporulation stage V, protein R M892_10175 7de400fb26ef1eab46c30c645c0bf194 154 Gene3D G3DSA:1.10.10.10 6 59 5.3E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_10175 7de400fb26ef1eab46c30c645c0bf194 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 35 54 8.3E-10 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 M892_10175 7de400fb26ef1eab46c30c645c0bf194 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 24 35 8.3E-10 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 M892_10175 7de400fb26ef1eab46c30c645c0bf194 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 8 24 8.3E-10 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 M892_10175 7de400fb26ef1eab46c30c645c0bf194 154 SMART SM00344 8 115 4.6E-40 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 M892_10175 7de400fb26ef1eab46c30c645c0bf194 154 Gene3D G3DSA:3.30.70.920 60 142 2.2E-31 T 12-10-2018 M892_10175 7de400fb26ef1eab46c30c645c0bf194 154 SUPERFAMILY SSF54909 69 153 5.36E-19 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel M892_10175 7de400fb26ef1eab46c30c645c0bf194 154 Pfam PF01037 Lrp/AsnC ligand binding domain 75 145 1.4E-16 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain M892_10175 7de400fb26ef1eab46c30c645c0bf194 154 Pfam PF13404 AsnC-type helix-turn-helix domain 8 49 8.0E-14 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 M892_10175 7de400fb26ef1eab46c30c645c0bf194 154 SUPERFAMILY SSF46785 7 68 3.44E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_06600 d010e73a17dbde4c5d91d7cadb1e2aac 308 SMART SM00260 17 153 2.9E-24 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 M892_06600 d010e73a17dbde4c5d91d7cadb1e2aac 308 Pfam PF00072 Response regulator receiver domain 184 302 2.7E-18 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_06600 d010e73a17dbde4c5d91d7cadb1e2aac 308 Gene3D G3DSA:3.40.50.2300 180 308 2.0E-25 T 12-10-2018 M892_06600 d010e73a17dbde4c5d91d7cadb1e2aac 308 Gene3D G3DSA:2.30.30.40 23 147 2.0E-28 T 12-10-2018 M892_06600 d010e73a17dbde4c5d91d7cadb1e2aac 308 SMART SM00448 182 302 7.7E-20 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_06600 d010e73a17dbde4c5d91d7cadb1e2aac 308 SUPERFAMILY SSF52172 183 306 1.57E-25 T 12-10-2018 IPR011006 CheY-like superfamily M892_06600 d010e73a17dbde4c5d91d7cadb1e2aac 308 SUPERFAMILY SSF50341 16 157 7.98E-36 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 M892_06600 d010e73a17dbde4c5d91d7cadb1e2aac 308 PIRSF PIRSF002867 1 308 1.1E-103 T 12-10-2018 IPR024181 Chemotaxis response regulator CheV M892_06600 d010e73a17dbde4c5d91d7cadb1e2aac 308 Gene3D G3DSA:2.40.50.180 39 153 2.0E-28 T 12-10-2018 M892_06600 d010e73a17dbde4c5d91d7cadb1e2aac 308 Pfam PF01584 CheW-like domain 21 155 1.6E-34 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 M892_15070 684a9e5e767fda8ac859399c2082772a 210 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 4 210 6.4E-92 T 12-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 M892_15070 684a9e5e767fda8ac859399c2082772a 210 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 4 210 44.394 T 12-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 M892_15070 684a9e5e767fda8ac859399c2082772a 210 SUPERFAMILY SSF53271 5 208 1.44E-66 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like M892_15070 684a9e5e767fda8ac859399c2082772a 210 Gene3D G3DSA:3.40.50.2020 3 210 1.7E-73 T 12-10-2018 M892_15070 684a9e5e767fda8ac859399c2082772a 210 Pfam PF14681 Uracil phosphoribosyltransferase 9 209 1.1E-64 T 12-10-2018 M892_09700 1f9086c8d865480c547c146d131c791b 227 Pfam PF00588 SpoU rRNA Methylase family 20 158 1.2E-34 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 M892_09700 1f9086c8d865480c547c146d131c791b 227 Gene3D G3DSA:3.40.1280.10 1 204 6.0E-59 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal M892_09700 1f9086c8d865480c547c146d131c791b 227 SUPERFAMILY SSF75217 4 173 1.83E-45 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases M892_09700 1f9086c8d865480c547c146d131c791b 227 Pfam PF12105 SpoU, rRNA methylase, C-terminal 162 217 2.7E-25 T 12-10-2018 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal GO:0009020 M892_09700 1f9086c8d865480c547c146d131c791b 227 Hamap MF_02060 tRNA (guanosine(18)-2'-O)-methyltransferase [trmH]. 2 196 34.969 T 12-10-2018 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase GO:0008168|GO:0030488 M892_01690 147dbc093f18953f048f4a52c7c2efc7 336 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 336 8.6E-148 T 12-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 M892_01690 147dbc093f18953f048f4a52c7c2efc7 336 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 336 51.67 T 12-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 M892_01690 147dbc093f18953f048f4a52c7c2efc7 336 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 80 99 - T 12-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 M892_01690 147dbc093f18953f048f4a52c7c2efc7 336 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 12-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 M892_01690 147dbc093f18953f048f4a52c7c2efc7 336 Pfam PF01180 Dihydroorotate dehydrogenase 47 336 3.8E-91 T 12-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 M892_01690 147dbc093f18953f048f4a52c7c2efc7 336 PIRSF PIRSF000164 10 336 1.8E-106 T 12-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 M892_01690 147dbc093f18953f048f4a52c7c2efc7 336 SUPERFAMILY SSF51395 1 336 2.43E-108 T 12-10-2018 M892_01690 147dbc093f18953f048f4a52c7c2efc7 336 Gene3D G3DSA:3.20.20.70 2 336 1.5E-143 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M892_06045 d8dc3139d0920693bcba6b6acc243fa2 296 Pfam PF00550 Phosphopantetheine attachment site 228 289 1.6E-9 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain M892_06045 d8dc3139d0920693bcba6b6acc243fa2 296 SUPERFAMILY SSF52499 2 209 3.14E-58 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 M892_06045 d8dc3139d0920693bcba6b6acc243fa2 296 Pfam PF00857 Isochorismatase family 30 203 3.1E-35 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 M892_06045 d8dc3139d0920693bcba6b6acc243fa2 296 Gene3D G3DSA:3.40.50.850 1 209 1.4E-74 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 M892_06045 d8dc3139d0920693bcba6b6acc243fa2 296 SUPERFAMILY SSF47336 226 294 2.22E-11 T 12-10-2018 IPR036736 ACP-like superfamily M892_06045 d8dc3139d0920693bcba6b6acc243fa2 296 Gene3D G3DSA:1.10.1200.10 220 295 1.8E-26 T 12-10-2018 IPR036736 ACP-like superfamily M892_06045 d8dc3139d0920693bcba6b6acc243fa2 296 PRINTS PR01398 Isochorismatase signature 2 14 1.1E-46 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 M892_06045 d8dc3139d0920693bcba6b6acc243fa2 296 PRINTS PR01398 Isochorismatase signature 110 132 1.1E-46 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 M892_06045 d8dc3139d0920693bcba6b6acc243fa2 296 PRINTS PR01398 Isochorismatase signature 166 184 1.1E-46 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 M892_06045 d8dc3139d0920693bcba6b6acc243fa2 296 PRINTS PR01398 Isochorismatase signature 184 201 1.1E-46 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 M892_06045 d8dc3139d0920693bcba6b6acc243fa2 296 PRINTS PR01398 Isochorismatase signature 61 78 1.1E-46 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 M892_06045 d8dc3139d0920693bcba6b6acc243fa2 296 PRINTS PR01398 Isochorismatase signature 78 97 1.1E-46 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 M892_06045 d8dc3139d0920693bcba6b6acc243fa2 296 PIRSF PIRSF001111 1 296 7.0E-126 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 M892_28330 f60dcb5b0891a5a1a948649d304a82ff 514 Pfam PF13005 zinc-finger binding domain of transposase IS66 120 164 1.6E-16 T 12-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 M892_28330 f60dcb5b0891a5a1a948649d304a82ff 514 Pfam PF13007 Transposase C of IS166 homeodomain 42 112 2.2E-14 T 12-10-2018 IPR024463 Transposase TnpC, homeodomain M892_28330 f60dcb5b0891a5a1a948649d304a82ff 514 Pfam PF13817 IS66 C-terminal element 474 510 7.6E-8 T 12-10-2018 IPR039552 Transposase IS66, C-terminal M892_28330 f60dcb5b0891a5a1a948649d304a82ff 514 Pfam PF03050 Transposase IS66 family 184 467 4.9E-101 T 12-10-2018 IPR004291 Transposase, IS66 M892_02595 f60dcb5b0891a5a1a948649d304a82ff 514 Pfam PF13005 zinc-finger binding domain of transposase IS66 120 164 1.6E-16 T 12-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 M892_02595 f60dcb5b0891a5a1a948649d304a82ff 514 Pfam PF13007 Transposase C of IS166 homeodomain 42 112 2.2E-14 T 12-10-2018 IPR024463 Transposase TnpC, homeodomain M892_02595 f60dcb5b0891a5a1a948649d304a82ff 514 Pfam PF13817 IS66 C-terminal element 474 510 7.6E-8 T 12-10-2018 IPR039552 Transposase IS66, C-terminal M892_02595 f60dcb5b0891a5a1a948649d304a82ff 514 Pfam PF03050 Transposase IS66 family 184 467 4.9E-101 T 12-10-2018 IPR004291 Transposase, IS66 M892_03570 f60dcb5b0891a5a1a948649d304a82ff 514 Pfam PF13005 zinc-finger binding domain of transposase IS66 120 164 1.6E-16 T 12-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 M892_03570 f60dcb5b0891a5a1a948649d304a82ff 514 Pfam PF13007 Transposase C of IS166 homeodomain 42 112 2.2E-14 T 12-10-2018 IPR024463 Transposase TnpC, homeodomain M892_03570 f60dcb5b0891a5a1a948649d304a82ff 514 Pfam PF13817 IS66 C-terminal element 474 510 7.6E-8 T 12-10-2018 IPR039552 Transposase IS66, C-terminal M892_03570 f60dcb5b0891a5a1a948649d304a82ff 514 Pfam PF03050 Transposase IS66 family 184 467 4.9E-101 T 12-10-2018 IPR004291 Transposase, IS66 M892_23495 f60dcb5b0891a5a1a948649d304a82ff 514 Pfam PF13005 zinc-finger binding domain of transposase IS66 120 164 1.6E-16 T 12-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 M892_23495 f60dcb5b0891a5a1a948649d304a82ff 514 Pfam PF13007 Transposase C of IS166 homeodomain 42 112 2.2E-14 T 12-10-2018 IPR024463 Transposase TnpC, homeodomain M892_23495 f60dcb5b0891a5a1a948649d304a82ff 514 Pfam PF13817 IS66 C-terminal element 474 510 7.6E-8 T 12-10-2018 IPR039552 Transposase IS66, C-terminal M892_23495 f60dcb5b0891a5a1a948649d304a82ff 514 Pfam PF03050 Transposase IS66 family 184 467 4.9E-101 T 12-10-2018 IPR004291 Transposase, IS66 M892_24650 af198d781ce3d43c1af8184ea8b264ec 477 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 286 293 - T 12-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_24650 af198d781ce3d43c1af8184ea8b264ec 477 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 129 462 9.6E-113 T 12-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_24650 af198d781ce3d43c1af8184ea8b264ec 477 SUPERFAMILY SSF55347 288 451 1.28E-52 T 12-10-2018 M892_24650 af198d781ce3d43c1af8184ea8b264ec 477 SUPERFAMILY SSF51735 128 304 1.18E-43 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_24650 af198d781ce3d43c1af8184ea8b264ec 477 Gene3D G3DSA:3.30.360.10 287 452 1.1E-113 T 12-10-2018 M892_24650 af198d781ce3d43c1af8184ea8b264ec 477 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 282 300 1.4E-17 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_24650 af198d781ce3d43c1af8184ea8b264ec 477 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 309 325 1.4E-17 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_24650 af198d781ce3d43c1af8184ea8b264ec 477 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 246 259 1.4E-17 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_24650 af198d781ce3d43c1af8184ea8b264ec 477 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 365 382 1.4E-17 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_24650 af198d781ce3d43c1af8184ea8b264ec 477 Gene3D G3DSA:3.40.50.720 129 462 1.1E-113 T 12-10-2018 M892_24650 af198d781ce3d43c1af8184ea8b264ec 477 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 128 238 3.5E-21 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_24650 af198d781ce3d43c1af8184ea8b264ec 477 SMART SM00846 127 288 1.1E-49 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_24650 af198d781ce3d43c1af8184ea8b264ec 477 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 293 450 1.7E-44 T 12-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_15320 ae9968b6209d95287011d5854c2f26c4 376 Gene3D G3DSA:3.40.1690.10 218 359 1.8E-57 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal M892_15320 ae9968b6209d95287011d5854c2f26c4 376 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 347 2.3E-121 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 M892_15320 ae9968b6209d95287011d5854c2f26c4 376 SUPERFAMILY SSF160544 250 355 8.24E-40 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal M892_15320 ae9968b6209d95287011d5854c2f26c4 376 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 7 353 3.0E-134 T 12-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 M892_15320 ae9968b6209d95287011d5854c2f26c4 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 7.1E-40 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 M892_15320 ae9968b6209d95287011d5854c2f26c4 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 7.1E-40 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 M892_15320 ae9968b6209d95287011d5854c2f26c4 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 7.1E-40 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 M892_15320 ae9968b6209d95287011d5854c2f26c4 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 7.1E-40 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 M892_15320 ae9968b6209d95287011d5854c2f26c4 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 7.1E-40 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 M892_25285 b308e7eb88b35681bd65dd01148dce2c 350 Gene3D G3DSA:3.40.50.2000 46 336 3.7E-57 T 12-10-2018 M892_25285 b308e7eb88b35681bd65dd01148dce2c 350 Gene3D G3DSA:3.40.50.2000 157 330 3.7E-57 T 12-10-2018 M892_25285 b308e7eb88b35681bd65dd01148dce2c 350 Pfam PF00534 Glycosyl transferases group 1 176 325 6.9E-33 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 M892_25285 b308e7eb88b35681bd65dd01148dce2c 350 Pfam PF13439 Glycosyltransferase Family 4 71 161 2.4E-13 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 M892_25285 b308e7eb88b35681bd65dd01148dce2c 350 SUPERFAMILY SSF53756 1 347 7.07E-72 T 12-10-2018 M892_20270 8af72c395abbaa80623ead44b1922711 306 Pfam PF13737 Transposase DDE domain 19 129 5.0E-44 T 12-10-2018 IPR025668 Transposase DDE domain M892_19065 8af72c395abbaa80623ead44b1922711 306 Pfam PF13737 Transposase DDE domain 19 129 5.0E-44 T 12-10-2018 IPR025668 Transposase DDE domain M892_21415 5018ef1ce26fa02ff7db610a5716151c 180 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 178 7.5E-34 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_21415 5018ef1ce26fa02ff7db610a5716151c 180 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 180 17.585 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_21415 5018ef1ce26fa02ff7db610a5716151c 180 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 178 3.5E-39 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_21415 5018ef1ce26fa02ff7db610a5716151c 180 PRINTS PR00125 ATP synthase delta subunit signature 153 171 2.0E-22 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_21415 5018ef1ce26fa02ff7db610a5716151c 180 PRINTS PR00125 ATP synthase delta subunit signature 138 153 2.0E-22 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_21415 5018ef1ce26fa02ff7db610a5716151c 180 PRINTS PR00125 ATP synthase delta subunit signature 7 26 2.0E-22 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_21415 5018ef1ce26fa02ff7db610a5716151c 180 PRINTS PR00125 ATP synthase delta subunit signature 77 88 2.0E-22 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_21415 5018ef1ce26fa02ff7db610a5716151c 180 PRINTS PR00125 ATP synthase delta subunit signature 88 102 2.0E-22 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_21415 5018ef1ce26fa02ff7db610a5716151c 180 Gene3D G3DSA:1.10.520.20 2 109 3.5E-25 T 12-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_21415 5018ef1ce26fa02ff7db610a5716151c 180 SUPERFAMILY SSF47928 3 108 7.72E-15 T 12-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_27435 5358720276650728b91e4fccc4251552 330 Pfam PF09134 Invasin, domain 3 30 117 2.0E-11 T 12-10-2018 IPR015217 Invasin, domain 3 M892_27435 5358720276650728b91e4fccc4251552 330 Gene3D G3DSA:2.60.40.10 223 325 2.4E-8 T 12-10-2018 IPR013783 Immunoglobulin-like fold M892_27435 5358720276650728b91e4fccc4251552 330 SMART SM00634 132 222 0.047 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain M892_27435 5358720276650728b91e4fccc4251552 330 SMART SM00634 32 123 0.087 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain M892_27435 5358720276650728b91e4fccc4251552 330 SUPERFAMILY SSF49373 25 122 4.71E-14 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments M892_27435 5358720276650728b91e4fccc4251552 330 Gene3D G3DSA:2.60.40.10 26 125 6.7E-15 T 12-10-2018 IPR013783 Immunoglobulin-like fold M892_27435 5358720276650728b91e4fccc4251552 330 Gene3D G3DSA:2.60.40.10 127 222 2.2E-8 T 12-10-2018 IPR013783 Immunoglobulin-like fold M892_27435 5358720276650728b91e4fccc4251552 330 SUPERFAMILY SSF49373 129 224 4.71E-10 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments M892_02870 c6cfe252f376d1acb8424f0b15220604 514 Pfam PF03050 Transposase IS66 family 184 467 3.9E-101 T 12-10-2018 IPR004291 Transposase, IS66 M892_02870 c6cfe252f376d1acb8424f0b15220604 514 Pfam PF13007 Transposase C of IS166 homeodomain 42 112 2.2E-14 T 12-10-2018 IPR024463 Transposase TnpC, homeodomain M892_02870 c6cfe252f376d1acb8424f0b15220604 514 Pfam PF13005 zinc-finger binding domain of transposase IS66 120 164 1.6E-16 T 12-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 M892_02870 c6cfe252f376d1acb8424f0b15220604 514 Pfam PF13817 IS66 C-terminal element 474 510 7.6E-8 T 12-10-2018 IPR039552 Transposase IS66, C-terminal M892_14115 f4fcb13f7ade9bf64ad735d717fd512c 135 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 98 5.0E-47 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 M892_14115 f4fcb13f7ade9bf64ad735d717fd512c 135 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 116 3.9E-35 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 M892_14115 f4fcb13f7ade9bf64ad735d717fd512c 135 SUPERFAMILY SSF89919 2 105 6.41E-32 T 12-10-2018 IPR023799 Ribosome-binding factor A domain superfamily M892_14115 f4fcb13f7ade9bf64ad735d717fd512c 135 Pfam PF02033 Ribosome-binding factor A 7 110 2.1E-30 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 M892_14115 f4fcb13f7ade9bf64ad735d717fd512c 135 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 6 111 26.472 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 M892_14115 f4fcb13f7ade9bf64ad735d717fd512c 135 ProSitePatterns PS01319 Ribosome-binding factor A signature. 77 98 - T 12-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 M892_14115 f4fcb13f7ade9bf64ad735d717fd512c 135 Gene3D G3DSA:3.30.300.20 1 106 3.9E-35 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta M892_19725 bf4a4328a14ee742838987b15fa57c5a 804 Pfam PF00391 PEP-utilising enzyme, mobile domain 398 469 1.1E-26 T 12-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 M892_19725 bf4a4328a14ee742838987b15fa57c5a 804 Gene3D G3DSA:3.50.30.10 372 491 2.5E-41 T 12-10-2018 M892_19725 bf4a4328a14ee742838987b15fa57c5a 804 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 708 726 - T 12-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 M892_19725 bf4a4328a14ee742838987b15fa57c5a 804 Gene3D G3DSA:3.30.1490.20 16 207 4.2E-72 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 M892_19725 bf4a4328a14ee742838987b15fa57c5a 804 Gene3D G3DSA:3.30.470.20 208 371 2.4E-59 T 12-10-2018 M892_19725 bf4a4328a14ee742838987b15fa57c5a 804 Gene3D G3DSA:3.20.20.60 492 802 8.0E-105 T 12-10-2018 M892_19725 bf4a4328a14ee742838987b15fa57c5a 804 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 428 439 - T 12-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 M892_19725 bf4a4328a14ee742838987b15fa57c5a 804 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 21 803 0.0 T 12-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 M892_19725 bf4a4328a14ee742838987b15fa57c5a 804 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 496 795 2.2E-62 T 12-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 M892_19725 bf4a4328a14ee742838987b15fa57c5a 804 PIRSF PIRSF000854 14 804 0.0 T 12-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 M892_19725 bf4a4328a14ee742838987b15fa57c5a 804 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 32 359 2.1E-119 T 12-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 M892_19725 bf4a4328a14ee742838987b15fa57c5a 804 SUPERFAMILY SSF56059 15 398 1.29E-108 T 12-10-2018 M892_19725 bf4a4328a14ee742838987b15fa57c5a 804 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 761 773 9.2E-6 T 12-10-2018 M892_19725 bf4a4328a14ee742838987b15fa57c5a 804 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 708 723 9.2E-6 T 12-10-2018 M892_19725 bf4a4328a14ee742838987b15fa57c5a 804 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 725 740 9.2E-6 T 12-10-2018 M892_19725 bf4a4328a14ee742838987b15fa57c5a 804 SUPERFAMILY SSF52009 363 481 8.11E-35 T 12-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 M892_19725 bf4a4328a14ee742838987b15fa57c5a 804 SUPERFAMILY SSF51621 475 802 2.43E-98 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 M892_14985 4122625cbdbf19b2fb7cff589b129a66 114 SMART SM00938 6 107 1.6E-69 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 M892_14985 4122625cbdbf19b2fb7cff589b129a66 114 ProSitePatterns PS00638 P-II protein C-terminal region signature. 85 98 - T 12-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 M892_14985 4122625cbdbf19b2fb7cff589b129a66 114 SUPERFAMILY SSF54913 3 114 3.81E-47 T 12-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta M892_14985 4122625cbdbf19b2fb7cff589b129a66 114 Gene3D G3DSA:3.30.70.120 1 114 4.7E-49 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal M892_14985 4122625cbdbf19b2fb7cff589b129a66 114 Pfam PF00543 Nitrogen regulatory protein P-II 6 107 1.3E-44 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 M892_14985 4122625cbdbf19b2fb7cff589b129a66 114 PIRSF PIRSF039144 3 114 9.5E-59 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 M892_14985 4122625cbdbf19b2fb7cff589b129a66 114 PRINTS PR00340 P-II protein signature 85 105 4.9E-44 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 M892_14985 4122625cbdbf19b2fb7cff589b129a66 114 PRINTS PR00340 P-II protein signature 25 43 4.9E-44 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 M892_14985 4122625cbdbf19b2fb7cff589b129a66 114 PRINTS PR00340 P-II protein signature 54 77 4.9E-44 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 M892_14985 4122625cbdbf19b2fb7cff589b129a66 114 PRINTS PR00340 P-II protein signature 4 19 4.9E-44 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 M892_14985 4122625cbdbf19b2fb7cff589b129a66 114 ProSitePatterns PS00496 P-II protein uridylation site. 48 53 - T 12-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 M892_00855 a17be44852ea629564fbbe0945987d14 537 Gene3D G3DSA:3.30.70.270 375 536 3.3E-41 T 12-10-2018 M892_00855 a17be44852ea629564fbbe0945987d14 537 Pfam PF03924 CHASE domain 108 287 3.8E-23 T 12-10-2018 IPR006189 CHASE domain M892_00855 a17be44852ea629564fbbe0945987d14 537 SUPERFAMILY SSF55073 386 535 1.73E-36 T 12-10-2018 IPR029787 Nucleotide cyclase M892_00855 a17be44852ea629564fbbe0945987d14 537 SMART SM01079 99 298 7.6E-28 T 12-10-2018 IPR006189 CHASE domain M892_00855 a17be44852ea629564fbbe0945987d14 537 SMART SM00267 370 536 4.1E-36 T 12-10-2018 IPR000160 GGDEF domain M892_00855 a17be44852ea629564fbbe0945987d14 537 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 377 534 1.6E-31 T 12-10-2018 IPR000160 GGDEF domain M892_00855 a17be44852ea629564fbbe0945987d14 537 Gene3D G3DSA:3.30.450.350 108 323 1.1E-5 T 12-10-2018 M892_00855 a17be44852ea629564fbbe0945987d14 537 Pfam PF00990 Diguanylate cyclase, GGDEF domain 381 531 1.1E-31 T 12-10-2018 IPR000160 GGDEF domain M892_12380 b8f7bffaa9dcf687e30d18fc06325871 386 PIRSF PIRSF001434 1 385 3.3E-131 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 M892_12380 b8f7bffaa9dcf687e30d18fc06325871 386 SUPERFAMILY SSF53383 9 383 6.12E-116 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M892_12380 b8f7bffaa9dcf687e30d18fc06325871 386 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 381 6.4E-136 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 M892_12380 b8f7bffaa9dcf687e30d18fc06325871 386 Gene3D G3DSA:3.40.640.10 3 248 3.9E-82 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M892_12380 b8f7bffaa9dcf687e30d18fc06325871 386 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 191 205 - T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 M892_12380 b8f7bffaa9dcf687e30d18fc06325871 386 Gene3D G3DSA:3.90.1150.10 249 386 3.8E-51 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M892_12380 b8f7bffaa9dcf687e30d18fc06325871 386 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 4 383 1.4E-202 T 12-10-2018 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48|MetaCyc: PWY-801 M892_26695 87c8fc50b68ff7fe395447f72e3419ad 400 SMART SM00631 138 380 2.0E-4 T 12-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 M892_26695 87c8fc50b68ff7fe395447f72e3419ad 400 Pfam PF00246 Zinc carboxypeptidase 152 367 5.5E-24 T 12-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 M892_26695 87c8fc50b68ff7fe395447f72e3419ad 400 SUPERFAMILY SSF53187 132 398 4.96E-64 T 12-10-2018 M892_26695 87c8fc50b68ff7fe395447f72e3419ad 400 Gene3D G3DSA:3.40.630.10 139 400 7.8E-72 T 12-10-2018 M892_26695 87c8fc50b68ff7fe395447f72e3419ad 400 Gene3D G3DSA:2.60.40.3120 14 138 1.8E-43 T 12-10-2018 M892_19515 28c2dd4ccde8600a3ae8b959c81b0491 302 Pfam PF00892 EamA-like transporter family 9 138 2.9E-12 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M892_19515 28c2dd4ccde8600a3ae8b959c81b0491 302 SUPERFAMILY SSF103481 42 142 1.19E-14 T 12-10-2018 M892_19515 28c2dd4ccde8600a3ae8b959c81b0491 302 SUPERFAMILY SSF103481 181 281 1.7E-10 T 12-10-2018 M892_19285 da196fc778e6da43de35d7f5765ddefa 236 SMART SM00862 156 231 8.5E-9 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M892_19285 da196fc778e6da43de35d7f5765ddefa 236 Pfam PF00072 Response regulator receiver domain 7 116 4.5E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_19285 da196fc778e6da43de35d7f5765ddefa 236 SUPERFAMILY SSF52172 3 127 6.69E-35 T 12-10-2018 IPR011006 CheY-like superfamily M892_19285 da196fc778e6da43de35d7f5765ddefa 236 SMART SM00448 5 115 7.0E-37 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_19285 da196fc778e6da43de35d7f5765ddefa 236 Gene3D G3DSA:1.10.10.10 139 235 1.6E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_19285 da196fc778e6da43de35d7f5765ddefa 236 SUPERFAMILY SSF46894 154 231 1.7E-14 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M892_19285 da196fc778e6da43de35d7f5765ddefa 236 Gene3D G3DSA:3.40.50.2300 1 123 1.1E-30 T 12-10-2018 M892_19285 da196fc778e6da43de35d7f5765ddefa 236 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 230 1.3E-12 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M892_01160 ecea87b2ea4db800f9ab6e89cdf0d2bc 421 Pfam PF00202 Aminotransferase class-III 17 406 1.6E-78 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 M892_01160 ecea87b2ea4db800f9ab6e89cdf0d2bc 421 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 2 412 3.2E-146 T 12-10-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 M892_01160 ecea87b2ea4db800f9ab6e89cdf0d2bc 421 Gene3D G3DSA:3.90.1150.10 5 405 4.3E-107 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M892_01160 ecea87b2ea4db800f9ab6e89cdf0d2bc 421 TIGRFAM TIGR02407 ectoine_ectB: diaminobutyrate--2-oxoglutarate aminotransferase 2 410 1.8E-203 T 12-10-2018 IPR012773 Ectoine biosynthetic protein GO:0019491|GO:0030170|GO:0047307 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 M892_01160 ecea87b2ea4db800f9ab6e89cdf0d2bc 421 Gene3D G3DSA:3.40.640.10 54 312 4.3E-107 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M892_01160 ecea87b2ea4db800f9ab6e89cdf0d2bc 421 PIRSF PIRSF000521 2 127 0.0018 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 M892_01160 ecea87b2ea4db800f9ab6e89cdf0d2bc 421 PIRSF PIRSF000521 120 154 4.1 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 M892_01160 ecea87b2ea4db800f9ab6e89cdf0d2bc 421 PIRSF PIRSF000521 175 412 1.1E-30 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 M892_01160 ecea87b2ea4db800f9ab6e89cdf0d2bc 421 SUPERFAMILY SSF53383 7 409 2.09E-103 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M892_01160 ecea87b2ea4db800f9ab6e89cdf0d2bc 421 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 230 266 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 M892_18685 646820ba8918287398e85c77e9008a60 160 Gene3D G3DSA:2.40.440.10 14 160 2.7E-18 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like M892_18685 646820ba8918287398e85c77e9008a60 160 SUPERFAMILY SSF141523 24 158 7.32E-24 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like M892_18685 646820ba8918287398e85c77e9008a60 160 Pfam PF03734 L,D-transpeptidase catalytic domain 24 158 6.6E-19 T 12-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 M892_14695 e721cc3e9831eba67213ef8b5cb2b228 450 Gene3D G3DSA:1.20.1250.20 248 442 3.7E-8 T 12-10-2018 M892_14695 e721cc3e9831eba67213ef8b5cb2b228 450 SUPERFAMILY SSF103473 10 436 2.35E-33 T 12-10-2018 IPR036259 MFS transporter superfamily M892_14695 e721cc3e9831eba67213ef8b5cb2b228 450 Gene3D G3DSA:1.20.1250.20 11 221 7.3E-11 T 12-10-2018 M892_14695 e721cc3e9831eba67213ef8b5cb2b228 450 Pfam PF07690 Major Facilitator Superfamily 24 397 2.2E-15 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 M892_02885 f434bf84a484e91bdfb0055eca0283a2 166 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 166 28.214 T 12-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 M892_02885 f434bf84a484e91bdfb0055eca0283a2 166 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 1 71 9.6E-28 T 12-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 M892_02885 f434bf84a484e91bdfb0055eca0283a2 166 Gene3D G3DSA:3.30.110.10 71 166 7.7E-39 T 12-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 M892_02885 f434bf84a484e91bdfb0055eca0283a2 166 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 78 164 6.0E-37 T 12-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 M892_02885 f434bf84a484e91bdfb0055eca0283a2 166 Gene3D G3DSA:3.10.20.80 1 70 1.9E-28 T 12-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 M892_02885 f434bf84a484e91bdfb0055eca0283a2 166 SUPERFAMILY SSF55200 78 166 5.49E-34 T 12-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 M892_02885 f434bf84a484e91bdfb0055eca0283a2 166 SUPERFAMILY SSF54364 2 73 2.09E-25 T 12-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 M892_02885 f434bf84a484e91bdfb0055eca0283a2 166 ProSitePatterns PS00938 Initiation factor 3 signature. 53 66 - T 12-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 M892_02885 f434bf84a484e91bdfb0055eca0283a2 166 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 2 166 4.4E-71 T 12-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 M892_05410 f7f4ef73aa06780fb90516049dcd8391 644 Pfam PF06798 PrkA serine protein kinase C-terminal domain 383 636 3.0E-72 T 12-10-2018 IPR010650 PrkA C-terminal domain M892_05410 f7f4ef73aa06780fb90516049dcd8391 644 Pfam PF08298 PrkA AAA domain 19 380 6.0E-176 T 12-10-2018 IPR013153 PrkA AAA domain M892_05410 f7f4ef73aa06780fb90516049dcd8391 644 PIRSF PIRSF000549 1 644 4.3E-289 T 12-10-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 M892_05410 f7f4ef73aa06780fb90516049dcd8391 644 SMART SM00763 19 380 8.8E-221 T 12-10-2018 IPR013153 PrkA AAA domain M892_05410 f7f4ef73aa06780fb90516049dcd8391 644 SUPERFAMILY SSF52540 73 368 2.44E-18 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_15555 936e30d93b2edc25b5ff0c273ccdfda5 308 SUPERFAMILY SSF52096 25 282 5.29E-84 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily M892_15555 936e30d93b2edc25b5ff0c273ccdfda5 308 Gene3D G3DSA:3.90.226.10 25 286 1.1E-81 T 12-10-2018 M892_15555 936e30d93b2edc25b5ff0c273ccdfda5 308 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 284 4.4E-139 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 M892_15555 936e30d93b2edc25b5ff0c273ccdfda5 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 7.1E-39 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 M892_15555 936e30d93b2edc25b5ff0c273ccdfda5 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 7.1E-39 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 M892_15555 936e30d93b2edc25b5ff0c273ccdfda5 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 7.1E-39 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 M892_15555 936e30d93b2edc25b5ff0c273ccdfda5 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 7.1E-39 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 M892_15555 936e30d93b2edc25b5ff0c273ccdfda5 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 7.1E-39 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 M892_15555 936e30d93b2edc25b5ff0c273ccdfda5 308 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 281 37.416 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 M892_15555 936e30d93b2edc25b5ff0c273ccdfda5 308 Pfam PF01039 Carboxyl transferase domain 100 240 6.9E-14 T 12-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 M892_26350 798eb6c03b9dd00637698d509e58ebb3 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 6.0E-29 T 12-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 M892_26350 798eb6c03b9dd00637698d509e58ebb3 89 Pfam PF01313 Bacterial export proteins, family 3 7 77 1.7E-26 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 M892_26350 798eb6c03b9dd00637698d509e58ebb3 89 PIRSF PIRSF004669 1 89 4.6E-26 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 M892_26350 798eb6c03b9dd00637698d509e58ebb3 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 4.8E-14 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 M892_26350 798eb6c03b9dd00637698d509e58ebb3 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 4.8E-14 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 M892_26350 798eb6c03b9dd00637698d509e58ebb3 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 4.8E-14 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 M892_20355 6c0f84eec99f275dd4441a0f7f08156e 1412 Gene3D G3DSA:3.40.50.740 781 1243 2.0E-178 T 12-10-2018 M892_20355 6c0f84eec99f275dd4441a0f7f08156e 1412 Gene3D G3DSA:3.40.228.10 854 1055 2.0E-178 T 12-10-2018 M892_20355 6c0f84eec99f275dd4441a0f7f08156e 1412 Pfam PF12838 4Fe-4S dicluster domain 634 703 4.1E-6 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M892_20355 6c0f84eec99f275dd4441a0f7f08156e 1412 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 1148 1165 - T 12-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 M892_20355 6c0f84eec99f275dd4441a0f7f08156e 1412 PRINTS PR00419 Adrenodoxin reductase family signature 323 337 1.4E-14 T 12-10-2018 M892_20355 6c0f84eec99f275dd4441a0f7f08156e 1412 PRINTS PR00419 Adrenodoxin reductase family signature 192 214 1.4E-14 T 12-10-2018 M892_20355 6c0f84eec99f275dd4441a0f7f08156e 1412 PRINTS PR00419 Adrenodoxin reductase family signature 215 228 1.4E-14 T 12-10-2018 M892_20355 6c0f84eec99f275dd4441a0f7f08156e 1412 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 192 488 1.1E-31 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 M892_20355 6c0f84eec99f275dd4441a0f7f08156e 1412 Gene3D G3DSA:2.20.25.90 718 773 1.0E-17 T 12-10-2018 M892_20355 6c0f84eec99f275dd4441a0f7f08156e 1412 SUPERFAMILY SSF54862 567 708 7.95E-20 T 12-10-2018 M892_20355 6c0f84eec99f275dd4441a0f7f08156e 1412 SUPERFAMILY SSF50692 1253 1394 1.85E-39 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily M892_20355 6c0f84eec99f275dd4441a0f7f08156e 1412 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 689 700 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M892_20355 6c0f84eec99f275dd4441a0f7f08156e 1412 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 96 174 2.5E-18 T 12-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 M892_20355 6c0f84eec99f275dd4441a0f7f08156e 1412 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 2 75 4.8E-10 T 12-10-2018 M892_20355 6c0f84eec99f275dd4441a0f7f08156e 1412 SUPERFAMILY SSF51971 190 430 4.83E-61 T 12-10-2018 M892_20355 6c0f84eec99f275dd4441a0f7f08156e 1412 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 719 771 8.0E-15 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M892_20355 6c0f84eec99f275dd4441a0f7f08156e 1412 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 723 740 - T 12-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 M892_20355 6c0f84eec99f275dd4441a0f7f08156e 1412 SMART SM00926 718 773 3.2E-15 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M892_20355 6c0f84eec99f275dd4441a0f7f08156e 1412 Pfam PF01568 Molydopterin dinucleotide binding domain 1285 1389 1.3E-29 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 M892_20355 6c0f84eec99f275dd4441a0f7f08156e 1412 Gene3D G3DSA:2.40.40.20 1275 1395 9.8E-40 T 12-10-2018 M892_20355 6c0f84eec99f275dd4441a0f7f08156e 1412 SUPERFAMILY SSF54292 1 98 2.91E-25 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 M892_20355 6c0f84eec99f275dd4441a0f7f08156e 1412 SUPERFAMILY SSF53706 714 1250 5.5E-203 T 12-10-2018 M892_20355 6c0f84eec99f275dd4441a0f7f08156e 1412 Pfam PF00384 Molybdopterin oxidoreductase 776 1202 3.4E-88 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M892_20355 6c0f84eec99f275dd4441a0f7f08156e 1412 Gene3D G3DSA:3.50.50.60 190 312 2.0E-33 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_20355 6c0f84eec99f275dd4441a0f7f08156e 1412 Gene3D G3DSA:3.50.50.60 318 524 2.9E-27 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_20355 6c0f84eec99f275dd4441a0f7f08156e 1412 Gene3D G3DSA:1.10.1060.10 58 189 2.7E-25 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 M892_20355 6c0f84eec99f275dd4441a0f7f08156e 1412 Gene3D G3DSA:3.30.70.20 614 707 4.5E-18 T 12-10-2018 M892_20355 6c0f84eec99f275dd4441a0f7f08156e 1412 SUPERFAMILY SSF46548 89 200 1.41E-16 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 M892_20355 6c0f84eec99f275dd4441a0f7f08156e 1412 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 723 1393 6.8E-246 T 12-10-2018 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.17.1.9|KEGG: 00680+1.17.1.9|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696|MetaCyc: PWY-7985 M892_26415 85a86e23e26506f16ffd39a1b60ccd82 242 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 210 236 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 M892_26415 85a86e23e26506f16ffd39a1b60ccd82 242 SUPERFAMILY SSF88659 165 240 2.62E-14 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like M892_26415 85a86e23e26506f16ffd39a1b60ccd82 242 Pfam PF04545 Sigma-70, region 4 189 236 1.2E-8 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 M892_26415 85a86e23e26506f16ffd39a1b60ccd82 242 Pfam PF04542 Sigma-70 region 2 28 101 1.2E-9 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 M892_26415 85a86e23e26506f16ffd39a1b60ccd82 242 Gene3D G3DSA:1.20.140.160 99 242 2.8E-31 T 12-10-2018 M892_26415 85a86e23e26506f16ffd39a1b60ccd82 242 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 26 239 1.6E-24 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 M892_26415 85a86e23e26506f16ffd39a1b60ccd82 242 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 28 240 5.0E-74 T 12-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 M892_26415 85a86e23e26506f16ffd39a1b60ccd82 242 SUPERFAMILY SSF88659 102 173 5.23E-12 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like M892_26415 85a86e23e26506f16ffd39a1b60ccd82 242 Gene3D G3DSA:1.10.1740.10 13 98 2.9E-17 T 12-10-2018 M892_26415 85a86e23e26506f16ffd39a1b60ccd82 242 SUPERFAMILY SSF88946 22 100 7.06E-16 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 M892_19990 0959a48b7b4f131103400294a74b0a1f 523 ProSitePatterns PS00211 ABC transporters family signature. 442 456 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_19990 0959a48b7b4f131103400294a74b0a1f 523 SUPERFAMILY SSF90123 2 288 5.1E-65 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 M892_19990 0959a48b7b4f131103400294a74b0a1f 523 Gene3D G3DSA:1.20.1560.10 1 289 8.2E-74 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 M892_19990 0959a48b7b4f131103400294a74b0a1f 523 Pfam PF00005 ABC transporter 321 470 1.2E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_19990 0959a48b7b4f131103400294a74b0a1f 523 SMART SM00382 330 516 2.9E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_19990 0959a48b7b4f131103400294a74b0a1f 523 SUPERFAMILY SSF52540 295 513 7.99E-78 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_19990 0959a48b7b4f131103400294a74b0a1f 523 TIGRFAM TIGR01846 type_I_sec_HlyB: type I secretion system ATPase 2 513 7.2E-256 T 12-10-2018 IPR010132 ATPase, type I secretion system, HlyB GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 M892_19990 0959a48b7b4f131103400294a74b0a1f 523 Pfam PF00664 ABC transporter transmembrane region 2 258 1.5E-49 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 M892_19990 0959a48b7b4f131103400294a74b0a1f 523 Gene3D G3DSA:3.40.50.300 300 521 1.1E-78 T 12-10-2018 M892_17255 0b8a963fda34cdb96c4870ff47de2deb 323 TIGRFAM TIGR03148 cyt_nit_nrfD: cytochrome c nitrite reductase, NrfD subunit 6 323 2.4E-147 T 12-10-2018 IPR017566 NrfD M892_17255 0b8a963fda34cdb96c4870ff47de2deb 323 Pfam PF03916 Polysulphide reductase, NrfD 6 322 1.6E-79 T 12-10-2018 IPR005614 NrfD family M892_17255 0b8a963fda34cdb96c4870ff47de2deb 323 Gene3D G3DSA:1.20.1630.10 8 281 2.6E-12 T 12-10-2018 M892_27300 7dea886e408de1009f66da9ba450ff42 181 SUPERFAMILY SSF81342 9 179 3.14E-27 T 12-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 M892_27300 7dea886e408de1009f66da9ba450ff42 181 Pfam PF01292 Prokaryotic cytochrome b561 13 180 1.4E-21 T 12-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 M892_00900 3a0827048073bfe455cea8c00741c67e 815 Gene3D G3DSA:3.40.50.740 48 322 5.8E-82 T 12-10-2018 M892_00900 3a0827048073bfe455cea8c00741c67e 815 SMART SM00926 50 110 2.4E-12 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M892_00900 3a0827048073bfe455cea8c00741c67e 815 SUPERFAMILY SSF50692 636 806 8.29E-35 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily M892_00900 3a0827048073bfe455cea8c00741c67e 815 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 50 110 2.4E-16 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M892_00900 3a0827048073bfe455cea8c00741c67e 815 SUPERFAMILY SSF53706 51 692 1.31E-176 T 12-10-2018 M892_00900 3a0827048073bfe455cea8c00741c67e 815 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 55 73 - T 12-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 M892_00900 3a0827048073bfe455cea8c00741c67e 815 Gene3D G3DSA:3.40.228.10 341 411 7.6E-17 T 12-10-2018 M892_00900 3a0827048073bfe455cea8c00741c67e 815 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 511 528 - T 12-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 M892_00900 3a0827048073bfe455cea8c00741c67e 815 Gene3D G3DSA:3.40.50.740 412 621 2.6E-52 T 12-10-2018 M892_00900 3a0827048073bfe455cea8c00741c67e 815 TIGRFAM TIGR02166 dmsA_ynfE: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 9 808 0.0 T 12-10-2018 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE GO:0009389|GO:0030151|GO:0051539|GO:0055114 M892_00900 3a0827048073bfe455cea8c00741c67e 815 Gene3D G3DSA:2.40.40.20 665 812 9.9E-39 T 12-10-2018 M892_00900 3a0827048073bfe455cea8c00741c67e 815 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 726 753 - T 12-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 M892_00900 3a0827048073bfe455cea8c00741c67e 815 Pfam PF01568 Molydopterin dinucleotide binding domain 690 801 9.2E-24 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 M892_00900 3a0827048073bfe455cea8c00741c67e 815 Pfam PF00384 Molybdopterin oxidoreductase 113 570 9.1E-98 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M892_21560 724ca3a6b54e727c9b2e2b5e76630a28 226 SUPERFAMILY SSF53335 38 201 3.64E-16 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M892_21560 724ca3a6b54e727c9b2e2b5e76630a28 226 Pfam PF13847 Methyltransferase domain 45 171 2.0E-11 T 12-10-2018 IPR025714 Methyltransferase domain M892_21560 724ca3a6b54e727c9b2e2b5e76630a28 226 Gene3D G3DSA:3.40.50.150 25 226 8.3E-28 T 12-10-2018 M892_06360 ed6a74d36562ef29f6c7a6c56f17364f 554 Gene3D G3DSA:3.60.20.10 2 193 3.5E-69 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal M892_06360 ed6a74d36562ef29f6c7a6c56f17364f 554 Pfam PF13537 Glutamine amidotransferase domain 48 165 4.7E-40 T 12-10-2018 IPR017932 Glutamine amidotransferase type 2 domain M892_06360 ed6a74d36562ef29f6c7a6c56f17364f 554 Pfam PF00733 Asparagine synthase 211 366 6.0E-56 T 12-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 M892_06360 ed6a74d36562ef29f6c7a6c56f17364f 554 PIRSF PIRSF001589 362 506 3.3E-27 T 12-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 M892_06360 ed6a74d36562ef29f6c7a6c56f17364f 554 PIRSF PIRSF001589 1 368 1.0E-104 T 12-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 M892_06360 ed6a74d36562ef29f6c7a6c56f17364f 554 SUPERFAMILY SSF56235 1 196 7.29E-56 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal M892_06360 ed6a74d36562ef29f6c7a6c56f17364f 554 Gene3D G3DSA:3.40.50.620 194 514 3.6E-112 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M892_06360 ed6a74d36562ef29f6c7a6c56f17364f 554 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 372 2.7E-114 T 12-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 M892_06360 ed6a74d36562ef29f6c7a6c56f17364f 554 SUPERFAMILY SSF52402 208 481 2.79E-74 T 12-10-2018 M892_06120 7d7a3ea8e8118a7123997602028c4dc6 270 SUPERFAMILY SSF52540 1 268 4.6E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_06120 7d7a3ea8e8118a7123997602028c4dc6 270 Pfam PF13614 AAA domain 3 159 6.2E-19 T 12-10-2018 IPR025669 AAA domain M892_06120 7d7a3ea8e8118a7123997602028c4dc6 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 268 3.6E-109 T 12-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 M892_06120 7d7a3ea8e8118a7123997602028c4dc6 270 PIRSF PIRSF003092 1 270 2.9E-93 T 12-10-2018 IPR025501 ATP binding protein MinD M892_06120 7d7a3ea8e8118a7123997602028c4dc6 270 Gene3D G3DSA:3.40.50.300 1 260 1.7E-72 T 12-10-2018 M892_01905 de710b1b19b3d3adc38c149ef6b886ec 278 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 136 273 5.9E-18 T 12-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 M892_01905 de710b1b19b3d3adc38c149ef6b886ec 278 SMART SM00047 128 262 0.0066 T 12-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 M892_01905 de710b1b19b3d3adc38c149ef6b886ec 278 Gene3D G3DSA:1.10.530.10 131 275 1.6E-14 T 12-10-2018 M892_15490 89961c886a8b959e13249ac0f61be107 459 Gene3D G3DSA:3.90.350.10 66 347 7.0E-80 T 12-10-2018 IPR014736 Transposase, Tn5-like, core M892_15490 89961c886a8b959e13249ac0f61be107 459 Pfam PF02281 Transposase Tn5 dimerisation domain 369 454 1.9E-17 T 12-10-2018 IPR003201 Transposase Tn5, dimerisation M892_15490 89961c886a8b959e13249ac0f61be107 459 Gene3D G3DSA:1.10.246.40 1 65 9.7E-25 T 12-10-2018 IPR038215 Transposase, Tn5-like, N-terminal domain superfamily M892_15490 89961c886a8b959e13249ac0f61be107 459 Gene3D G3DSA:1.10.740.10 348 458 1.7E-41 T 12-10-2018 IPR014737 Transposase, Tn5-like, C-terminal M892_15490 89961c886a8b959e13249ac0f61be107 459 Pfam PF01609 Transposase DDE domain 222 357 3.8E-5 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_15490 89961c886a8b959e13249ac0f61be107 459 Pfam PF14706 Transposase DNA-binding 9 65 5.0E-17 T 12-10-2018 IPR014735 Transposase, Tn5-like, N-terminal M892_15490 89961c886a8b959e13249ac0f61be107 459 SUPERFAMILY SSF53098 1 458 3.57E-131 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_20760 89961c886a8b959e13249ac0f61be107 459 Gene3D G3DSA:3.90.350.10 66 347 7.0E-80 T 12-10-2018 IPR014736 Transposase, Tn5-like, core M892_20760 89961c886a8b959e13249ac0f61be107 459 Pfam PF02281 Transposase Tn5 dimerisation domain 369 454 1.9E-17 T 12-10-2018 IPR003201 Transposase Tn5, dimerisation M892_20760 89961c886a8b959e13249ac0f61be107 459 Gene3D G3DSA:1.10.246.40 1 65 9.7E-25 T 12-10-2018 IPR038215 Transposase, Tn5-like, N-terminal domain superfamily M892_20760 89961c886a8b959e13249ac0f61be107 459 Gene3D G3DSA:1.10.740.10 348 458 1.7E-41 T 12-10-2018 IPR014737 Transposase, Tn5-like, C-terminal M892_20760 89961c886a8b959e13249ac0f61be107 459 Pfam PF01609 Transposase DDE domain 222 357 3.8E-5 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_20760 89961c886a8b959e13249ac0f61be107 459 Pfam PF14706 Transposase DNA-binding 9 65 5.0E-17 T 12-10-2018 IPR014735 Transposase, Tn5-like, N-terminal M892_20760 89961c886a8b959e13249ac0f61be107 459 SUPERFAMILY SSF53098 1 458 3.57E-131 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_17935 89961c886a8b959e13249ac0f61be107 459 Gene3D G3DSA:3.90.350.10 66 347 7.0E-80 T 12-10-2018 IPR014736 Transposase, Tn5-like, core M892_17935 89961c886a8b959e13249ac0f61be107 459 Pfam PF02281 Transposase Tn5 dimerisation domain 369 454 1.9E-17 T 12-10-2018 IPR003201 Transposase Tn5, dimerisation M892_17935 89961c886a8b959e13249ac0f61be107 459 Gene3D G3DSA:1.10.246.40 1 65 9.7E-25 T 12-10-2018 IPR038215 Transposase, Tn5-like, N-terminal domain superfamily M892_17935 89961c886a8b959e13249ac0f61be107 459 Gene3D G3DSA:1.10.740.10 348 458 1.7E-41 T 12-10-2018 IPR014737 Transposase, Tn5-like, C-terminal M892_17935 89961c886a8b959e13249ac0f61be107 459 Pfam PF01609 Transposase DDE domain 222 357 3.8E-5 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_17935 89961c886a8b959e13249ac0f61be107 459 Pfam PF14706 Transposase DNA-binding 9 65 5.0E-17 T 12-10-2018 IPR014735 Transposase, Tn5-like, N-terminal M892_17935 89961c886a8b959e13249ac0f61be107 459 SUPERFAMILY SSF53098 1 458 3.57E-131 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_18660 89961c886a8b959e13249ac0f61be107 459 Gene3D G3DSA:3.90.350.10 66 347 7.0E-80 T 12-10-2018 IPR014736 Transposase, Tn5-like, core M892_18660 89961c886a8b959e13249ac0f61be107 459 Pfam PF02281 Transposase Tn5 dimerisation domain 369 454 1.9E-17 T 12-10-2018 IPR003201 Transposase Tn5, dimerisation M892_18660 89961c886a8b959e13249ac0f61be107 459 Gene3D G3DSA:1.10.246.40 1 65 9.7E-25 T 12-10-2018 IPR038215 Transposase, Tn5-like, N-terminal domain superfamily M892_18660 89961c886a8b959e13249ac0f61be107 459 Gene3D G3DSA:1.10.740.10 348 458 1.7E-41 T 12-10-2018 IPR014737 Transposase, Tn5-like, C-terminal M892_18660 89961c886a8b959e13249ac0f61be107 459 Pfam PF01609 Transposase DDE domain 222 357 3.8E-5 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_18660 89961c886a8b959e13249ac0f61be107 459 Pfam PF14706 Transposase DNA-binding 9 65 5.0E-17 T 12-10-2018 IPR014735 Transposase, Tn5-like, N-terminal M892_18660 89961c886a8b959e13249ac0f61be107 459 SUPERFAMILY SSF53098 1 458 3.57E-131 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_20650 89961c886a8b959e13249ac0f61be107 459 Gene3D G3DSA:3.90.350.10 66 347 7.0E-80 T 12-10-2018 IPR014736 Transposase, Tn5-like, core M892_20650 89961c886a8b959e13249ac0f61be107 459 Pfam PF02281 Transposase Tn5 dimerisation domain 369 454 1.9E-17 T 12-10-2018 IPR003201 Transposase Tn5, dimerisation M892_20650 89961c886a8b959e13249ac0f61be107 459 Gene3D G3DSA:1.10.246.40 1 65 9.7E-25 T 12-10-2018 IPR038215 Transposase, Tn5-like, N-terminal domain superfamily M892_20650 89961c886a8b959e13249ac0f61be107 459 Gene3D G3DSA:1.10.740.10 348 458 1.7E-41 T 12-10-2018 IPR014737 Transposase, Tn5-like, C-terminal M892_20650 89961c886a8b959e13249ac0f61be107 459 Pfam PF01609 Transposase DDE domain 222 357 3.8E-5 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_20650 89961c886a8b959e13249ac0f61be107 459 Pfam PF14706 Transposase DNA-binding 9 65 5.0E-17 T 12-10-2018 IPR014735 Transposase, Tn5-like, N-terminal M892_20650 89961c886a8b959e13249ac0f61be107 459 SUPERFAMILY SSF53098 1 458 3.57E-131 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_21215 89961c886a8b959e13249ac0f61be107 459 Gene3D G3DSA:3.90.350.10 66 347 7.0E-80 T 12-10-2018 IPR014736 Transposase, Tn5-like, core M892_21215 89961c886a8b959e13249ac0f61be107 459 Pfam PF02281 Transposase Tn5 dimerisation domain 369 454 1.9E-17 T 12-10-2018 IPR003201 Transposase Tn5, dimerisation M892_21215 89961c886a8b959e13249ac0f61be107 459 Gene3D G3DSA:1.10.246.40 1 65 9.7E-25 T 12-10-2018 IPR038215 Transposase, Tn5-like, N-terminal domain superfamily M892_21215 89961c886a8b959e13249ac0f61be107 459 Gene3D G3DSA:1.10.740.10 348 458 1.7E-41 T 12-10-2018 IPR014737 Transposase, Tn5-like, C-terminal M892_21215 89961c886a8b959e13249ac0f61be107 459 Pfam PF01609 Transposase DDE domain 222 357 3.8E-5 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_21215 89961c886a8b959e13249ac0f61be107 459 Pfam PF14706 Transposase DNA-binding 9 65 5.0E-17 T 12-10-2018 IPR014735 Transposase, Tn5-like, N-terminal M892_21215 89961c886a8b959e13249ac0f61be107 459 SUPERFAMILY SSF53098 1 458 3.57E-131 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_25205 db6b40e86213198649f46d7c7efbfb92 52 Gene3D G3DSA:3.10.129.10 1 52 3.0E-7 T 12-10-2018 M892_25205 db6b40e86213198649f46d7c7efbfb92 52 SUPERFAMILY SSF54637 1 42 2.02E-7 T 12-10-2018 IPR029069 HotDog domain superfamily M892_19340 09638ca06f5f0a532489eac09b2a2e26 148 Gene3D G3DSA:1.10.720.30 24 83 9.1E-28 T 12-10-2018 IPR036361 SAP domain superfamily M892_19340 09638ca06f5f0a532489eac09b2a2e26 148 Pfam PF09905 DNA-binding protein VF530 16 78 2.4E-32 T 12-10-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 M892_19755 a8ca2c70b8b95cbc99d01ce4f0dc9608 289 SUPERFAMILY SSF46785 1 107 1.11E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_19755 a8ca2c70b8b95cbc99d01ce4f0dc9608 289 Pfam PF03466 LysR substrate binding domain 88 283 2.1E-29 T 12-10-2018 IPR005119 LysR, substrate-binding M892_19755 a8ca2c70b8b95cbc99d01ce4f0dc9608 289 Gene3D G3DSA:1.10.10.10 1 79 8.9E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_19755 a8ca2c70b8b95cbc99d01ce4f0dc9608 289 Gene3D G3DSA:3.40.190.10 175 249 2.9E-8 T 12-10-2018 M892_19755 a8ca2c70b8b95cbc99d01ce4f0dc9608 289 Gene3D G3DSA:3.40.190.10 80 169 9.8E-14 T 12-10-2018 M892_19755 a8ca2c70b8b95cbc99d01ce4f0dc9608 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 2.0E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_19755 a8ca2c70b8b95cbc99d01ce4f0dc9608 289 SUPERFAMILY SSF53850 89 284 1.33E-28 T 12-10-2018 M892_16485 26b7e0d6ea52503287f0a5a61b74e92e 194 Pfam PF13505 Outer membrane protein beta-barrel domain 4 149 1.1E-7 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel M892_16485 26b7e0d6ea52503287f0a5a61b74e92e 194 SUPERFAMILY SSF56925 20 184 4.71E-17 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel M892_16485 26b7e0d6ea52503287f0a5a61b74e92e 194 Gene3D G3DSA:2.40.160.20 18 157 2.6E-11 T 12-10-2018 M892_27765 a5a655a20fcd8774495164dd2f23a2a7 238 Gene3D G3DSA:3.30.70.980 131 202 5.1E-44 T 12-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_27765 a5a655a20fcd8774495164dd2f23a2a7 238 Pfam PF01709 Transcriptional regulator 5 235 1.4E-70 T 12-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_27765 a5a655a20fcd8774495164dd2f23a2a7 238 Gene3D G3DSA:3.30.70.980 83 235 5.1E-44 T 12-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_27765 a5a655a20fcd8774495164dd2f23a2a7 238 SUPERFAMILY SSF75625 1 237 1.83E-74 T 12-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_27765 a5a655a20fcd8774495164dd2f23a2a7 238 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 238 26.824 T 12-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_27765 a5a655a20fcd8774495164dd2f23a2a7 238 Gene3D G3DSA:1.10.10.200 17 78 2.7E-17 T 12-10-2018 IPR017856 Integrase-like, N-terminal M892_20295 8c1dda85f26829137a7d72c23d616b19 437 Gene3D G3DSA:1.10.760.10 153 430 3.9E-105 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M892_20295 8c1dda85f26829137a7d72c23d616b19 437 SMART SM01235 1 126 3.3E-43 T 12-10-2018 IPR025992 Haem-binding domain M892_20295 8c1dda85f26829137a7d72c23d616b19 437 Gene3D G3DSA:1.10.760.10 156 303 3.9E-105 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M892_20295 8c1dda85f26829137a7d72c23d616b19 437 SUPERFAMILY SSF46626 290 430 7.16E-38 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M892_20295 8c1dda85f26829137a7d72c23d616b19 437 Pfam PF14376 Haem-binding domain 13 123 6.6E-28 T 12-10-2018 IPR025992 Haem-binding domain M892_20295 8c1dda85f26829137a7d72c23d616b19 437 Pfam PF00034 Cytochrome c 315 427 1.6E-4 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_20295 8c1dda85f26829137a7d72c23d616b19 437 Pfam PF03150 Di-haem cytochrome c peroxidase 156 303 8.4E-49 T 12-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 M892_20295 8c1dda85f26829137a7d72c23d616b19 437 SUPERFAMILY SSF46626 145 291 9.69E-47 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M892_04955 c2ff009ea718fa63ec63845c0133e854 653 Gene3D G3DSA:3.30.300.30 519 651 1.0E-30 T 12-10-2018 M892_04955 c2ff009ea718fa63ec63845c0133e854 653 SUPERFAMILY SSF56801 11 642 4.58E-176 T 12-10-2018 M892_04955 c2ff009ea718fa63ec63845c0133e854 653 Pfam PF13193 AMP-binding enzyme C-terminal domain 532 610 2.0E-26 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain M892_04955 c2ff009ea718fa63ec63845c0133e854 653 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 81 6.6E-20 T 12-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 M892_04955 c2ff009ea718fa63ec63845c0133e854 653 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 12-10-2018 IPR020845 AMP-binding, conserved site M892_04955 c2ff009ea718fa63ec63845c0133e854 653 Pfam PF00501 AMP-binding enzyme 84 523 2.2E-87 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 M892_04955 c2ff009ea718fa63ec63845c0133e854 653 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 646 51.066 T 12-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 M892_04955 c2ff009ea718fa63ec63845c0133e854 653 Gene3D G3DSA:3.40.50.12780 50 516 6.6E-100 T 12-10-2018 M892_04955 c2ff009ea718fa63ec63845c0133e854 653 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 644 1.4E-298 T 12-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 M892_22360 82b6bd3c6421d28a708da6dee53f0a0f 894 Gene3D G3DSA:3.40.50.300 581 796 1.3E-69 T 12-10-2018 M892_22360 82b6bd3c6421d28a708da6dee53f0a0f 894 Gene3D G3DSA:1.10.8.60 799 892 1.6E-13 T 12-10-2018 M892_22360 82b6bd3c6421d28a708da6dee53f0a0f 894 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 311 323 - T 12-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 M892_22360 82b6bd3c6421d28a708da6dee53f0a0f 894 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 222 350 6.4E-10 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 M892_22360 82b6bd3c6421d28a708da6dee53f0a0f 894 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 17 880 0.0 T 12-10-2018 IPR017729 Type VI secretion system, ATPase ClpV1 M892_22360 82b6bd3c6421d28a708da6dee53f0a0f 894 SMART SM00382 215 360 3.8E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_22360 82b6bd3c6421d28a708da6dee53f0a0f 894 SMART SM00382 628 787 8.6E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_22360 82b6bd3c6421d28a708da6dee53f0a0f 894 Gene3D G3DSA:3.40.50.300 361 575 8.3E-49 T 12-10-2018 M892_22360 82b6bd3c6421d28a708da6dee53f0a0f 894 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 662 680 - T 12-10-2018 IPR028299 ClpA/B, conserved site 2 M892_22360 82b6bd3c6421d28a708da6dee53f0a0f 894 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 799 873 4.3E-13 T 12-10-2018 IPR019489 Clp ATPase, C-terminal M892_22360 82b6bd3c6421d28a708da6dee53f0a0f 894 SUPERFAMILY SSF81923 20 126 1.94E-11 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 M892_22360 82b6bd3c6421d28a708da6dee53f0a0f 894 Gene3D G3DSA:1.10.1780.10 1 162 5.9E-37 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 M892_22360 82b6bd3c6421d28a708da6dee53f0a0f 894 SUPERFAMILY SSF52540 577 879 5.04E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_22360 82b6bd3c6421d28a708da6dee53f0a0f 894 SMART SM01086 799 889 1.4E-10 T 12-10-2018 IPR019489 Clp ATPase, C-terminal M892_22360 82b6bd3c6421d28a708da6dee53f0a0f 894 SUPERFAMILY SSF52540 177 510 7.04E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_22360 82b6bd3c6421d28a708da6dee53f0a0f 894 Gene3D G3DSA:3.40.50.300 164 359 9.9E-63 T 12-10-2018 M892_22360 82b6bd3c6421d28a708da6dee53f0a0f 894 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 739 753 2.5E-33 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 M892_22360 82b6bd3c6421d28a708da6dee53f0a0f 894 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 677 695 2.5E-33 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 M892_22360 82b6bd3c6421d28a708da6dee53f0a0f 894 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 706 724 2.5E-33 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 M892_22360 82b6bd3c6421d28a708da6dee53f0a0f 894 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 632 650 2.5E-33 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 M892_22360 82b6bd3c6421d28a708da6dee53f0a0f 894 Pfam PF07724 AAA domain (Cdc48 subfamily) 628 792 1.1E-43 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 M892_18175 08b716f746ff72be1e49f488e7b56b6d 139 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 13 135 4.4E-11 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain M892_18175 08b716f746ff72be1e49f488e7b56b6d 139 SUPERFAMILY SSF54593 10 136 1.07E-22 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M892_18175 08b716f746ff72be1e49f488e7b56b6d 139 Gene3D G3DSA:3.10.180.10 12 139 3.2E-25 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M892_04935 d1e16569bfc4d318580c92afd19a4157 253 SUPERFAMILY SSF46894 41 108 3.68E-8 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M892_04935 d1e16569bfc4d318580c92afd19a4157 253 Gene3D G3DSA:1.10.10.10 27 110 3.0E-11 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_04935 d1e16569bfc4d318580c92afd19a4157 253 SMART SM00862 31 108 8.0E-7 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M892_04935 d1e16569bfc4d318580c92afd19a4157 253 Pfam PF00486 Transcriptional regulatory protein, C terminal 53 108 1.8E-9 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M892_07135 1261181f0b74f8a16355d545a608f7f8 135 Pfam PF07417 Transcriptional regulator Crl 12 129 1.0E-48 T 12-10-2018 IPR009986 Sigma factor-binding protein Crl GO:0045893 M892_07135 1261181f0b74f8a16355d545a608f7f8 135 Hamap MF_01178 Sigma factor-binding protein Crl [crl]. 10 135 31.201 T 12-10-2018 IPR009986 Sigma factor-binding protein Crl GO:0045893 M892_07135 1261181f0b74f8a16355d545a608f7f8 135 Gene3D G3DSA:3.30.310.230 8 134 1.6E-45 T 12-10-2018 IPR038208 Sigma factor-binding protein Crl superfamily GO:0045893 M892_22760 79b4a40e24091076a3de2242e9031250 329 Pfam PF01820 D-ala D-ala ligase N-terminus 4 105 2.0E-19 T 12-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 M892_22760 79b4a40e24091076a3de2242e9031250 329 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 271 299 - T 12-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 M892_22760 79b4a40e24091076a3de2242e9031250 329 SUPERFAMILY SSF56059 115 326 9.49E-45 T 12-10-2018 M892_22760 79b4a40e24091076a3de2242e9031250 329 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 82 93 - T 12-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 M892_22760 79b4a40e24091076a3de2242e9031250 329 Gene3D G3DSA:3.30.1490.20 131 198 1.5E-80 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 M892_22760 79b4a40e24091076a3de2242e9031250 329 Gene3D G3DSA:3.40.50.20 18 325 1.5E-80 T 12-10-2018 M892_22760 79b4a40e24091076a3de2242e9031250 329 Gene3D G3DSA:3.30.470.20 104 319 1.5E-80 T 12-10-2018 M892_22760 79b4a40e24091076a3de2242e9031250 329 PIRSF PIRSF039102 1 329 5.0E-77 T 12-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 M892_22760 79b4a40e24091076a3de2242e9031250 329 Pfam PF07478 D-ala D-ala ligase C-terminus 125 325 3.6E-54 T 12-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 M892_22760 79b4a40e24091076a3de2242e9031250 329 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 3 329 33.356 T 12-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 M892_22760 79b4a40e24091076a3de2242e9031250 329 SUPERFAMILY SSF52440 3 114 7.87E-27 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily M892_22760 79b4a40e24091076a3de2242e9031250 329 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 5 328 6.1E-98 T 12-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 M892_08515 fdb6c9e63b3cf081a28c158b7596ef0e 194 Gene3D G3DSA:3.40.50.1820 6 194 2.0E-61 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_08515 fdb6c9e63b3cf081a28c158b7596ef0e 194 SUPERFAMILY SSF53474 5 192 5.73E-21 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_08515 fdb6c9e63b3cf081a28c158b7596ef0e 194 Pfam PF05728 Uncharacterised protein family (UPF0227) 7 192 2.0E-69 T 12-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA M892_25175 f016e913a3d81cfce678fe016d0cb612 301 Pfam PF05661 Protein of unknown function (DUF808) 4 290 1.4E-114 T 12-10-2018 IPR008526 Inner membrane protein YedI M892_25175 f016e913a3d81cfce678fe016d0cb612 301 PIRSF PIRSF016660 1 301 4.0E-120 T 12-10-2018 IPR008526 Inner membrane protein YedI M892_06990 0a817440578f90b12231df73b4465595 181 Hamap MF_01104 Protein Syd [syd]. 3 181 36.618 T 12-10-2018 IPR009948 Syd GO:0009898 M892_06990 0a817440578f90b12231df73b4465595 181 Gene3D G3DSA:3.40.1580.20 1 181 1.9E-68 T 12-10-2018 IPR038228 Syd superfamily M892_06990 0a817440578f90b12231df73b4465595 181 Pfam PF07348 Syd protein (SUKH-2) 7 178 5.7E-70 T 12-10-2018 IPR009948 Syd GO:0009898 M892_28435 83556470bc2ec370b44ecfbb0c2e4037 734 SUPERFAMILY SSF56712 1 620 1.11E-140 T 12-10-2018 IPR023405 DNA topoisomerase, type IA, core domain M892_28435 83556470bc2ec370b44ecfbb0c2e4037 734 TIGRFAM TIGR01056 topB: DNA topoisomerase III 2 672 2.3E-158 T 12-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 M892_28435 83556470bc2ec370b44ecfbb0c2e4037 734 Pfam PF01751 Toprim domain 3 131 8.1E-12 T 12-10-2018 IPR006171 TOPRIM domain M892_28435 83556470bc2ec370b44ecfbb0c2e4037 734 Pfam PF01131 DNA topoisomerase 156 606 1.1E-84 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 M892_28435 83556470bc2ec370b44ecfbb0c2e4037 734 Gene3D G3DSA:2.70.20.10 215 488 1.9E-126 T 12-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 M892_28435 83556470bc2ec370b44ecfbb0c2e4037 734 SMART SM00436 126 221 3.2E-8 T 12-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 M892_28435 83556470bc2ec370b44ecfbb0c2e4037 734 Gene3D G3DSA:1.10.460.10 160 615 1.9E-126 T 12-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 M892_28435 83556470bc2ec370b44ecfbb0c2e4037 734 Gene3D G3DSA:3.40.50.140 1 154 5.6E-47 T 12-10-2018 M892_28435 83556470bc2ec370b44ecfbb0c2e4037 734 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 312 327 - T 12-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 M892_28435 83556470bc2ec370b44ecfbb0c2e4037 734 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 318 327 7.5E-18 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 M892_28435 83556470bc2ec370b44ecfbb0c2e4037 734 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 191 209 7.5E-18 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 M892_28435 83556470bc2ec370b44ecfbb0c2e4037 734 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 401 417 7.5E-18 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 M892_28435 83556470bc2ec370b44ecfbb0c2e4037 734 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 100 113 7.5E-18 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 M892_28435 83556470bc2ec370b44ecfbb0c2e4037 734 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 528 542 7.5E-18 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 M892_28435 83556470bc2ec370b44ecfbb0c2e4037 734 Gene3D G3DSA:1.10.290.10 284 415 1.9E-126 T 12-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 M892_28435 83556470bc2ec370b44ecfbb0c2e4037 734 SMART SM00437 275 572 1.1E-52 T 12-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 M892_28435 83556470bc2ec370b44ecfbb0c2e4037 734 Gene3D G3DSA:3.30.65.10 622 677 2.9E-5 T 12-10-2018 M892_28435 83556470bc2ec370b44ecfbb0c2e4037 734 SUPERFAMILY SSF57783 629 665 2.04E-9 T 12-10-2018 M892_28435 83556470bc2ec370b44ecfbb0c2e4037 734 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 633 666 7.7E-11 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 M892_28435 83556470bc2ec370b44ecfbb0c2e4037 734 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 684 722 5.9E-8 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 M892_28435 83556470bc2ec370b44ecfbb0c2e4037 734 SMART SM00493 1 126 9.7E-13 T 12-10-2018 IPR006171 TOPRIM domain M892_08510 6448aa7088aa2fcb94b0851edd18fd0f 626 Gene3D G3DSA:3.30.230.10 216 389 7.3E-58 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M892_08510 6448aa7088aa2fcb94b0851edd18fd0f 626 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 2 626 47.009 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 M892_08510 6448aa7088aa2fcb94b0851edd18fd0f 626 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 3 623 0.0 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 M892_08510 6448aa7088aa2fcb94b0851edd18fd0f 626 SMART SM00387 27 173 3.6E-20 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_08510 6448aa7088aa2fcb94b0851edd18fd0f 626 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 556 618 1.1E-26 T 12-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 M892_08510 6448aa7088aa2fcb94b0851edd18fd0f 626 Gene3D G3DSA:3.30.565.10 2 215 1.7E-75 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_08510 6448aa7088aa2fcb94b0851edd18fd0f 626 SUPERFAMILY SSF55874 5 215 2.87E-66 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_08510 6448aa7088aa2fcb94b0851edd18fd0f 626 SMART SM00433 34 622 1.3E-216 T 12-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 M892_08510 6448aa7088aa2fcb94b0851edd18fd0f 626 SUPERFAMILY SSF54211 217 382 3.03E-47 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold M892_08510 6448aa7088aa2fcb94b0851edd18fd0f 626 PRINTS PR01098 Topoisomerase IV subunit B signature 448 469 1.8E-124 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 M892_08510 6448aa7088aa2fcb94b0851edd18fd0f 626 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 1.8E-124 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 M892_08510 6448aa7088aa2fcb94b0851edd18fd0f 626 PRINTS PR01098 Topoisomerase IV subunit B signature 362 387 1.8E-124 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 M892_08510 6448aa7088aa2fcb94b0851edd18fd0f 626 PRINTS PR01098 Topoisomerase IV subunit B signature 135 149 1.8E-124 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 M892_08510 6448aa7088aa2fcb94b0851edd18fd0f 626 PRINTS PR01098 Topoisomerase IV subunit B signature 26 39 1.8E-124 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 M892_08510 6448aa7088aa2fcb94b0851edd18fd0f 626 PRINTS PR01098 Topoisomerase IV subunit B signature 294 310 1.8E-124 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 M892_08510 6448aa7088aa2fcb94b0851edd18fd0f 626 PRINTS PR01098 Topoisomerase IV subunit B signature 311 326 1.8E-124 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 M892_08510 6448aa7088aa2fcb94b0851edd18fd0f 626 PRINTS PR01098 Topoisomerase IV subunit B signature 149 164 1.8E-124 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 M892_08510 6448aa7088aa2fcb94b0851edd18fd0f 626 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 1.8E-124 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 M892_08510 6448aa7088aa2fcb94b0851edd18fd0f 626 PRINTS PR01098 Topoisomerase IV subunit B signature 537 559 1.8E-124 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 M892_08510 6448aa7088aa2fcb94b0851edd18fd0f 626 PRINTS PR01098 Topoisomerase IV subunit B signature 338 361 1.8E-124 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 M892_08510 6448aa7088aa2fcb94b0851edd18fd0f 626 PRINTS PR01098 Topoisomerase IV subunit B signature 469 481 1.8E-124 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 M892_08510 6448aa7088aa2fcb94b0851edd18fd0f 626 PRINTS PR01098 Topoisomerase IV subunit B signature 503 519 1.8E-124 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 M892_08510 6448aa7088aa2fcb94b0851edd18fd0f 626 PRINTS PR01098 Topoisomerase IV subunit B signature 238 261 1.8E-124 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 M892_08510 6448aa7088aa2fcb94b0851edd18fd0f 626 SUPERFAMILY SSF56719 388 619 1.28E-79 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 M892_08510 6448aa7088aa2fcb94b0851edd18fd0f 626 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 171 1.3E-16 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_08510 6448aa7088aa2fcb94b0851edd18fd0f 626 Gene3D G3DSA:3.40.50.670 390 621 1.4E-92 T 12-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 M892_08510 6448aa7088aa2fcb94b0851edd18fd0f 626 Pfam PF00204 DNA gyrase B 218 384 1.2E-42 T 12-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 M892_08510 6448aa7088aa2fcb94b0851edd18fd0f 626 Pfam PF01751 Toprim domain 413 521 8.9E-12 T 12-10-2018 IPR006171 TOPRIM domain M892_08510 6448aa7088aa2fcb94b0851edd18fd0f 626 PRINTS PR00418 DNA topoisomerase II family signature 109 123 5.5E-58 T 12-10-2018 M892_08510 6448aa7088aa2fcb94b0851edd18fd0f 626 PRINTS PR00418 DNA topoisomerase II family signature 414 428 5.5E-58 T 12-10-2018 M892_08510 6448aa7088aa2fcb94b0851edd18fd0f 626 PRINTS PR00418 DNA topoisomerase II family signature 497 514 5.5E-58 T 12-10-2018 M892_08510 6448aa7088aa2fcb94b0851edd18fd0f 626 PRINTS PR00418 DNA topoisomerase II family signature 560 576 5.5E-58 T 12-10-2018 M892_08510 6448aa7088aa2fcb94b0851edd18fd0f 626 PRINTS PR00418 DNA topoisomerase II family signature 31 46 5.5E-58 T 12-10-2018 M892_08510 6448aa7088aa2fcb94b0851edd18fd0f 626 PRINTS PR00418 DNA topoisomerase II family signature 479 495 5.5E-58 T 12-10-2018 M892_08510 6448aa7088aa2fcb94b0851edd18fd0f 626 PRINTS PR00418 DNA topoisomerase II family signature 266 279 5.5E-58 T 12-10-2018 M892_08510 6448aa7088aa2fcb94b0851edd18fd0f 626 PRINTS PR00418 DNA topoisomerase II family signature 517 529 5.5E-58 T 12-10-2018 M892_08510 6448aa7088aa2fcb94b0851edd18fd0f 626 PRINTS PR00418 DNA topoisomerase II family signature 66 79 5.5E-58 T 12-10-2018 M892_20010 19ac1e9a27909370d84069e1076f2f55 895 SUPERFAMILY SSF103647 227 322 8.5E-5 T 12-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 M892_20010 19ac1e9a27909370d84069e1076f2f55 895 Gene3D G3DSA:2.150.10.10 695 856 1.3E-22 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal M892_20010 19ac1e9a27909370d84069e1076f2f55 895 Pfam PF06594 Haemolysin-type calcium binding protein related domain 804 837 8.2E-5 T 12-10-2018 IPR010566 Haemolysin-type calcium binding-related M892_20010 19ac1e9a27909370d84069e1076f2f55 895 PRINTS PR00313 NodO calcium binding signature 735 743 3.1E-8 T 12-10-2018 M892_20010 19ac1e9a27909370d84069e1076f2f55 895 PRINTS PR00313 NodO calcium binding signature 704 712 3.1E-8 T 12-10-2018 M892_20010 19ac1e9a27909370d84069e1076f2f55 895 PRINTS PR00313 NodO calcium binding signature 673 684 3.1E-8 T 12-10-2018 M892_20010 19ac1e9a27909370d84069e1076f2f55 895 PRINTS PR00313 NodO calcium binding signature 744 753 3.1E-8 T 12-10-2018 M892_20010 19ac1e9a27909370d84069e1076f2f55 895 SUPERFAMILY SSF51120 638 821 2.47E-20 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal M892_20010 19ac1e9a27909370d84069e1076f2f55 895 Gene3D G3DSA:2.150.10.10 569 694 1.5E-13 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal M892_20010 19ac1e9a27909370d84069e1076f2f55 895 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 260 278 5.7E-7 T 12-10-2018 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 M892_20010 19ac1e9a27909370d84069e1076f2f55 895 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 667 688 5.7E-7 T 12-10-2018 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 M892_27895 47103e9e52f59f4088deeb1fb2244faf 123 SUPERFAMILY SSF46785 1 77 8.68E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_27895 47103e9e52f59f4088deeb1fb2244faf 123 SMART SM00345 14 73 1.5E-11 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M892_27895 47103e9e52f59f4088deeb1fb2244faf 123 Gene3D G3DSA:1.10.10.10 7 122 5.8E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_27895 47103e9e52f59f4088deeb1fb2244faf 123 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 73 1.6E-14 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M892_06485 a1b9ec5dad35aaf024694d80c5c35538 322 SUPERFAMILY SSF53686 3 313 4.71E-95 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme M892_06485 a1b9ec5dad35aaf024694d80c5c35538 322 Gene3D G3DSA:3.40.50.1100 43 145 1.8E-124 T 12-10-2018 M892_06485 a1b9ec5dad35aaf024694d80c5c35538 322 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 311 4.0E-141 T 12-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 M892_06485 a1b9ec5dad35aaf024694d80c5c35538 322 TIGRFAM TIGR01136 cysKM: cysteine synthase 10 311 3.1E-134 T 12-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 M892_06485 a1b9ec5dad35aaf024694d80c5c35538 322 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 299 1.6E-67 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme M892_06485 a1b9ec5dad35aaf024694d80c5c35538 322 Gene3D G3DSA:3.40.50.1100 12 306 1.8E-124 T 12-10-2018 M892_06485 a1b9ec5dad35aaf024694d80c5c35538 322 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 12-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 M892_12415 fe92ce63cdca55c03ceb493be6774b29 263 SUPERFAMILY SSF53633 5 262 1.36E-58 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily M892_12415 fe92ce63cdca55c03ceb493be6774b29 263 Hamap MF_00082 Acetylglutamate kinase [argB]. 6 255 42.62 T 12-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 M892_12415 fe92ce63cdca55c03ceb493be6774b29 263 PIRSF PIRSF000728 1 263 6.6E-70 T 12-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 M892_12415 fe92ce63cdca55c03ceb493be6774b29 263 Gene3D G3DSA:3.40.1160.10 4 260 4.1E-65 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily M892_12415 fe92ce63cdca55c03ceb493be6774b29 263 Pfam PF00696 Amino acid kinase family 9 238 3.5E-36 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 M892_12415 fe92ce63cdca55c03ceb493be6774b29 263 TIGRFAM TIGR00761 argB: acetylglutamate kinase 9 234 1.2E-63 T 12-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 M892_22300 c039c9899d8273232bb7bdf28eece232 326 SUPERFAMILY SSF50341 7 165 1.7E-33 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 M892_22300 c039c9899d8273232bb7bdf28eece232 326 Pfam PF00072 Response regulator receiver domain 195 316 8.8E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_22300 c039c9899d8273232bb7bdf28eece232 326 Gene3D G3DSA:3.40.50.2300 180 323 5.8E-29 T 12-10-2018 M892_22300 c039c9899d8273232bb7bdf28eece232 326 PIRSF PIRSF002867 1 324 5.0E-103 T 12-10-2018 IPR024181 Chemotaxis response regulator CheV M892_22300 c039c9899d8273232bb7bdf28eece232 326 Pfam PF01584 CheW-like domain 35 162 1.9E-30 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 M892_22300 c039c9899d8273232bb7bdf28eece232 326 SMART SM00260 14 160 4.5E-26 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 M892_22300 c039c9899d8273232bb7bdf28eece232 326 Gene3D G3DSA:2.30.30.40 36 154 6.0E-30 T 12-10-2018 M892_22300 c039c9899d8273232bb7bdf28eece232 326 SMART SM00448 193 318 1.2E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_22300 c039c9899d8273232bb7bdf28eece232 326 Gene3D G3DSA:2.40.50.180 44 160 6.0E-30 T 12-10-2018 M892_22300 c039c9899d8273232bb7bdf28eece232 326 SUPERFAMILY SSF52172 193 320 1.85E-28 T 12-10-2018 IPR011006 CheY-like superfamily M892_20530 dd0316c0ec5c09123a71a6adc061eb5d 115 Gene3D G3DSA:1.10.260.40 3 72 7.3E-11 T 12-10-2018 M892_20530 dd0316c0ec5c09123a71a6adc061eb5d 115 SMART SM00530 9 64 1.7E-9 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 M892_20530 dd0316c0ec5c09123a71a6adc061eb5d 115 Pfam PF13560 Helix-turn-helix domain 12 61 1.8E-10 T 12-10-2018 M892_20530 dd0316c0ec5c09123a71a6adc061eb5d 115 SUPERFAMILY SSF47413 6 61 1.77E-11 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 M892_01015 1abc59283be4cf00e1c1b67fe194cc39 209 Pfam PF01810 LysE type translocator 15 205 6.6E-38 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 M892_01015 1abc59283be4cf00e1c1b67fe194cc39 209 PIRSF PIRSF006324 1 209 5.6E-56 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 M892_08490 600049be4c9b6a565946172da5c0ca6a 147 PIRSF PIRSF006318 1 136 4.7E-56 T 12-10-2018 IPR009386 Protein of unknown function DUF1043 M892_08490 600049be4c9b6a565946172da5c0ca6a 147 Pfam PF06295 Protein of unknown function (DUF1043) 6 129 1.9E-47 T 12-10-2018 IPR009386 Protein of unknown function DUF1043 M892_12580 ad03680a4a4efa7075e05b45b59da865 300 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 1 296 45.535 T 12-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 M892_12580 ad03680a4a4efa7075e05b45b59da865 300 Pfam PF01207 Dihydrouridine synthase (Dus) 2 289 1.3E-85 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 M892_12580 ad03680a4a4efa7075e05b45b59da865 300 PIRSF PIRSF006621 1 297 2.4E-65 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 M892_12580 ad03680a4a4efa7075e05b45b59da865 300 SUPERFAMILY SSF51395 5 293 1.43E-64 T 12-10-2018 M892_12580 ad03680a4a4efa7075e05b45b59da865 300 Gene3D G3DSA:3.20.20.70 1 219 3.2E-63 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M892_12580 ad03680a4a4efa7075e05b45b59da865 300 Gene3D G3DSA:1.20.120.1460 223 299 1.4E-23 T 12-10-2018 M892_12580 ad03680a4a4efa7075e05b45b59da865 300 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 61 79 - T 12-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 M892_12580 ad03680a4a4efa7075e05b45b59da865 300 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 1 294 7.1E-146 T 12-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 M892_07775 a00e2f7722a07a42302407c54158853c 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 5.1E-113 T 12-10-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 M892_07775 a00e2f7722a07a42302407c54158853c 229 SMART SM00448 3 116 2.0E-45 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_07775 a00e2f7722a07a42302407c54158853c 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 3.9E-28 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M892_07775 a00e2f7722a07a42302407c54158853c 229 SMART SM00862 150 225 1.3E-27 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M892_07775 a00e2f7722a07a42302407c54158853c 229 SUPERFAMILY SSF52172 3 183 4.23E-43 T 12-10-2018 IPR011006 CheY-like superfamily M892_07775 a00e2f7722a07a42302407c54158853c 229 Gene3D G3DSA:3.40.50.2300 1 126 8.5E-39 T 12-10-2018 M892_07775 a00e2f7722a07a42302407c54158853c 229 Gene3D G3DSA:1.10.10.10 127 228 3.1E-40 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_07775 a00e2f7722a07a42302407c54158853c 229 Pfam PF00072 Response regulator receiver domain 5 116 8.4E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_26985 d844760747316071f5de356565e940ce 682 Pfam PF00128 Alpha amylase, catalytic domain 225 279 1.7E-5 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 M892_26985 d844760747316071f5de356565e940ce 682 Gene3D G3DSA:2.60.40.10 29 141 2.8E-18 T 12-10-2018 IPR013783 Immunoglobulin-like fold M892_26985 d844760747316071f5de356565e940ce 682 SUPERFAMILY SSF51011 582 674 1.11E-13 T 12-10-2018 M892_26985 d844760747316071f5de356565e940ce 682 Gene3D G3DSA:3.20.20.80 142 576 1.2E-142 T 12-10-2018 M892_26985 d844760747316071f5de356565e940ce 682 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 36 113 1.1E-10 T 12-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 M892_26985 d844760747316071f5de356565e940ce 682 SUPERFAMILY SSF51445 138 568 2.71E-98 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily M892_26985 d844760747316071f5de356565e940ce 682 Gene3D G3DSA:2.60.40.1180 581 674 1.6E-6 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta M892_26985 d844760747316071f5de356565e940ce 682 SMART SM00642 171 565 2.0E-4 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 M892_26985 d844760747316071f5de356565e940ce 682 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 33 670 2.0E-198 T 12-10-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 M892_26985 d844760747316071f5de356565e940ce 682 SUPERFAMILY SSF81296 33 150 8.4E-21 T 12-10-2018 IPR014756 Immunoglobulin E-set M892_09235 c9961c523dbe2f7ef8b872fdeef6b2b4 733 TIGRFAM TIGR00595 priA: primosomal protein N' 221 729 2.9E-191 T 12-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 M892_09235 c9961c523dbe2f7ef8b872fdeef6b2b4 733 Pfam PF00270 DEAD/DEAH box helicase 219 364 1.3E-14 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 M892_09235 c9961c523dbe2f7ef8b872fdeef6b2b4 733 Hamap MF_00983 Probable primosomal protein N' [priA]. 8 732 25.257 T 12-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 M892_09235 c9961c523dbe2f7ef8b872fdeef6b2b4 733 Gene3D G3DSA:3.40.50.300 185 379 3.2E-77 T 12-10-2018 M892_09235 c9961c523dbe2f7ef8b872fdeef6b2b4 733 SMART SM00490 492 589 6.7E-13 T 12-10-2018 IPR001650 Helicase, C-terminal M892_09235 c9961c523dbe2f7ef8b872fdeef6b2b4 733 Pfam PF00271 Helicase conserved C-terminal domain 499 588 2.1E-8 T 12-10-2018 IPR001650 Helicase, C-terminal M892_09235 c9961c523dbe2f7ef8b872fdeef6b2b4 733 SUPERFAMILY SSF52540 461 631 7.65E-29 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_09235 c9961c523dbe2f7ef8b872fdeef6b2b4 733 Gene3D G3DSA:1.10.8.630 4 113 5.1E-35 T 12-10-2018 M892_09235 c9961c523dbe2f7ef8b872fdeef6b2b4 733 SMART SM00487 196 395 7.3E-17 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain M892_09235 c9961c523dbe2f7ef8b872fdeef6b2b4 733 SUPERFAMILY SSF52540 70 379 5.86E-41 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_09375 d2e51ee4d7ad18852c3ad01b3d14f82d 312 SUPERFAMILY SSF53756 62 261 5.53E-11 T 12-10-2018 M892_09375 d2e51ee4d7ad18852c3ad01b3d14f82d 312 Gene3D G3DSA:3.40.50.2000 137 310 7.1E-10 T 12-10-2018 M892_01700 0d660598a908001d66a2399b4e4df701 707 PIRSF PIRSF037618 1 707 2.4E-296 T 12-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 M892_01700 0d660598a908001d66a2399b4e4df701 707 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 4 706 31.517 T 12-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 M892_01700 0d660598a908001d66a2399b4e4df701 707 Gene3D G3DSA:3.30.2130.30 6 255 6.2E-137 T 12-10-2018 M892_01700 0d660598a908001d66a2399b4e4df701 707 SMART SM00981 56 154 1.7E-19 T 12-10-2018 IPR004114 THUMP domain GO:0003723 M892_01700 0d660598a908001d66a2399b4e4df701 707 Pfam PF01170 Putative RNA methylase family UPF0020 162 374 2.6E-61 T 12-10-2018 IPR000241 Putative RNA methylase domain M892_01700 0d660598a908001d66a2399b4e4df701 707 Gene3D G3DSA:3.30.750.80 396 487 4.4E-35 T 12-10-2018 M892_01700 0d660598a908001d66a2399b4e4df701 707 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 305 311 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 M892_01700 0d660598a908001d66a2399b4e4df701 707 SUPERFAMILY SSF53335 140 371 3.7E-42 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M892_01700 0d660598a908001d66a2399b4e4df701 707 Pfam PF02926 THUMP domain 30 153 2.8E-13 T 12-10-2018 IPR004114 THUMP domain GO:0003723 M892_01700 0d660598a908001d66a2399b4e4df701 707 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 302 314 7.4E-5 T 12-10-2018 M892_01700 0d660598a908001d66a2399b4e4df701 707 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 193 207 7.4E-5 T 12-10-2018 M892_01700 0d660598a908001d66a2399b4e4df701 707 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 436 661 1.3E-27 T 12-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 M892_01700 0d660598a908001d66a2399b4e4df701 707 Gene3D G3DSA:3.40.50.150 169 371 6.2E-137 T 12-10-2018 M892_01700 0d660598a908001d66a2399b4e4df701 707 SUPERFAMILY SSF53335 399 707 9.68E-70 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M892_01700 0d660598a908001d66a2399b4e4df701 707 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 195 206 - T 12-10-2018 IPR000241 Putative RNA methylase domain M892_01700 0d660598a908001d66a2399b4e4df701 707 Gene3D G3DSA:3.40.50.150 488 706 1.4E-73 T 12-10-2018 M892_12175 4be170545f04067cb835cdd632321a2d 394 SUPERFAMILY SSF52343 255 393 1.7E-35 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain M892_12175 4be170545f04067cb835cdd632321a2d 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 356 364 4.8E-9 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 M892_12175 4be170545f04067cb835cdd632321a2d 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 247 256 4.8E-9 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 M892_12175 4be170545f04067cb835cdd632321a2d 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 263 282 4.8E-9 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 M892_12175 4be170545f04067cb835cdd632321a2d 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 183 195 4.8E-9 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 M892_12175 4be170545f04067cb835cdd632321a2d 394 Hamap MF_01252 Flavohemoprotein [hmp]. 1 394 55.467 T 12-10-2018 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 M892_12175 4be170545f04067cb835cdd632321a2d 394 Gene3D G3DSA:2.40.30.10 149 254 1.2E-32 T 12-10-2018 M892_12175 4be170545f04067cb835cdd632321a2d 394 SUPERFAMILY SSF46458 1 142 8.81E-37 T 12-10-2018 IPR009050 Globin-like superfamily M892_12175 4be170545f04067cb835cdd632321a2d 394 Pfam PF00970 Oxidoreductase FAD-binding domain 155 252 1.5E-13 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 M892_12175 4be170545f04067cb835cdd632321a2d 394 SUPERFAMILY SSF63380 148 253 1.16E-28 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel M892_12175 4be170545f04067cb835cdd632321a2d 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 183 193 8.0E-8 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 M892_12175 4be170545f04067cb835cdd632321a2d 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 263 282 8.0E-8 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 M892_12175 4be170545f04067cb835cdd632321a2d 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 204 211 8.0E-8 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 M892_12175 4be170545f04067cb835cdd632321a2d 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 356 364 8.0E-8 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 M892_12175 4be170545f04067cb835cdd632321a2d 394 Gene3D G3DSA:1.10.490.10 1 143 6.7E-51 T 12-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 M892_12175 4be170545f04067cb835cdd632321a2d 394 Pfam PF00175 Oxidoreductase NAD-binding domain 264 370 1.4E-17 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 M892_12175 4be170545f04067cb835cdd632321a2d 394 Pfam PF00042 Globin 10 102 7.9E-13 T 12-10-2018 IPR000971 Globin GO:0020037 M892_12175 4be170545f04067cb835cdd632321a2d 394 Gene3D G3DSA:3.40.50.80 256 394 2.1E-32 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain M892_05140 c68ca4c4ee7722f587bb9fb1332172d2 592 SUPERFAMILY SSF50249 1 105 2.48E-34 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M892_05140 c68ca4c4ee7722f587bb9fb1332172d2 592 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 584 33.199 T 12-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 M892_05140 c68ca4c4ee7722f587bb9fb1332172d2 592 Gene3D G3DSA:3.30.1360.30 271 420 1.2E-195 T 12-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 M892_05140 c68ca4c4ee7722f587bb9fb1332172d2 592 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 6.6E-16 T 12-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 M892_05140 c68ca4c4ee7722f587bb9fb1332172d2 592 Gene3D G3DSA:2.40.50.140 1 106 8.8E-35 T 12-10-2018 M892_05140 c68ca4c4ee7722f587bb9fb1332172d2 592 SUPERFAMILY SSF55261 288 419 1.46E-46 T 12-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 M892_05140 c68ca4c4ee7722f587bb9fb1332172d2 592 Gene3D G3DSA:3.30.930.10 118 578 1.2E-195 T 12-10-2018 M892_05140 c68ca4c4ee7722f587bb9fb1332172d2 592 SUPERFAMILY SSF55681 108 582 5.94E-101 T 12-10-2018 M892_05140 c68ca4c4ee7722f587bb9fb1332172d2 592 Pfam PF00152 tRNA synthetases class II (D, K and N) 117 558 2.6E-104 T 12-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 M892_05140 c68ca4c4ee7722f587bb9fb1332172d2 592 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 583 1.5E-265 T 12-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 M892_05140 c68ca4c4ee7722f587bb9fb1332172d2 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 2.7E-26 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 M892_05140 c68ca4c4ee7722f587bb9fb1332172d2 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 518 532 2.7E-26 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 M892_05140 c68ca4c4ee7722f587bb9fb1332172d2 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 2.7E-26 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 M892_05140 c68ca4c4ee7722f587bb9fb1332172d2 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 474 490 2.7E-26 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 M892_05140 c68ca4c4ee7722f587bb9fb1332172d2 592 Pfam PF02938 GAD domain 307 406 1.8E-30 T 12-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 M892_05080 3fb88fc4c020dea8f0d52ac310b82121 342 TIGRFAM TIGR02794 tolA_full: protein TolA 13 339 2.3E-86 T 12-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 M892_05080 3fb88fc4c020dea8f0d52ac310b82121 342 SUPERFAMILY SSF74653 250 341 2.75E-15 T 12-10-2018 M892_05080 3fb88fc4c020dea8f0d52ac310b82121 342 Gene3D G3DSA:3.30.1150.10 240 339 3.0E-22 T 12-10-2018 M892_05080 3fb88fc4c020dea8f0d52ac310b82121 342 Pfam PF06519 TolA C-terminal 240 338 1.8E-34 T 12-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 M892_25850 a82786d35c5ff5db6c9c5ba8c47df756 355 Pfam PF13592 Winged helix-turn helix 98 155 7.6E-20 T 12-10-2018 IPR025959 Winged helix-turn helix domain M892_25850 a82786d35c5ff5db6c9c5ba8c47df756 355 SUPERFAMILY SSF46689 16 131 6.57E-24 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_25850 a82786d35c5ff5db6c9c5ba8c47df756 355 Pfam PF13384 Homeodomain-like domain 28 67 9.4E-6 T 12-10-2018 M892_25850 a82786d35c5ff5db6c9c5ba8c47df756 355 SUPERFAMILY SSF53098 221 318 1.97E-7 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_25850 a82786d35c5ff5db6c9c5ba8c47df756 355 Gene3D G3DSA:3.30.420.470 137 339 8.9E-12 T 12-10-2018 M892_25850 a82786d35c5ff5db6c9c5ba8c47df756 355 Pfam PF13358 DDE superfamily endonuclease 169 312 3.2E-34 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_06580 35770cb2dd4c1748fda57b4a12416054 235 Pfam PF13860 FlgD Ig-like domain 119 184 5.9E-19 T 12-10-2018 IPR025965 FlgD Ig-like domain M892_06580 35770cb2dd4c1748fda57b4a12416054 235 Gene3D G3DSA:2.30.30.910 94 222 1.4E-36 T 12-10-2018 M892_06580 35770cb2dd4c1748fda57b4a12416054 235 Pfam PF13861 FlgD Tudor-like domain 93 229 2.0E-15 T 12-10-2018 IPR025963 FlgD Tudor-like domain M892_06580 35770cb2dd4c1748fda57b4a12416054 235 Gene3D G3DSA:2.60.40.4070 110 196 1.4E-36 T 12-10-2018 M892_06580 35770cb2dd4c1748fda57b4a12416054 235 Pfam PF03963 Flagellar hook capping protein - N-terminal region 22 85 2.0E-21 T 12-10-2018 IPR005648 Flagellar hook capping protein M892_07140 3184a25f7e845c58d15ea5de40a5c653 415 Gene3D G3DSA:3.40.50.1820 18 415 2.3E-109 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_07140 3184a25f7e845c58d15ea5de40a5c653 415 SUPERFAMILY SSF53474 47 411 1.22E-40 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_07140 3184a25f7e845c58d15ea5de40a5c653 415 Hamap MF_01063 Esterase FrsA [frsA]. 4 415 54.349 T 12-10-2018 IPR010520 UPF0255 family M892_07140 3184a25f7e845c58d15ea5de40a5c653 415 Pfam PF06500 Alpha/beta hydrolase of unknown function (DUF1100) 5 413 1.3E-228 T 12-10-2018 IPR010520 UPF0255 family M892_06975 642c520b75491a690c5e2abc337f92ca 206 PRINTS PR01607 Apyrase family signature 35 52 1.9E-5 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M892_06975 642c520b75491a690c5e2abc337f92ca 206 PRINTS PR01607 Apyrase family signature 124 144 1.9E-5 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M892_06975 642c520b75491a690c5e2abc337f92ca 206 SUPERFAMILY SSF56300 6 182 5.06E-19 T 12-10-2018 M892_06975 642c520b75491a690c5e2abc337f92ca 206 Gene3D G3DSA:3.60.21.10 1 190 5.8E-18 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like M892_24470 779d7b7dcae4d3396d7d71cfda631069 578 Gene3D G3DSA:3.30.565.10 438 575 1.7E-25 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_24470 779d7b7dcae4d3396d7d71cfda631069 578 SMART SM00304 176 228 1.3E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M892_24470 779d7b7dcae4d3396d7d71cfda631069 578 SUPERFAMILY SSF158472 178 225 8.11E-8 T 12-10-2018 M892_24470 779d7b7dcae4d3396d7d71cfda631069 578 SUPERFAMILY SSF55874 449 567 7.99E-15 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_24470 779d7b7dcae4d3396d7d71cfda631069 578 SMART SM00387 478 571 1.0E-9 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_24470 779d7b7dcae4d3396d7d71cfda631069 578 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 480 568 3.3E-8 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_24470 779d7b7dcae4d3396d7d71cfda631069 578 PIRSF PIRSF003167 2 577 5.0E-177 T 12-10-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 M892_24470 779d7b7dcae4d3396d7d71cfda631069 578 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 34 129 9.5E-22 T 12-10-2018 IPR029095 NarX-like, N-terminal M892_24470 779d7b7dcae4d3396d7d71cfda631069 578 Gene3D G3DSA:1.20.120.960 40 148 2.3E-11 T 12-10-2018 M892_24470 779d7b7dcae4d3396d7d71cfda631069 578 Gene3D G3DSA:1.10.287.130 176 282 1.2E-6 T 12-10-2018 M892_24470 779d7b7dcae4d3396d7d71cfda631069 578 Pfam PF07730 Histidine kinase 369 437 2.3E-16 T 12-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 M892_17980 2d0416cbe42968d23a57c886df7d5f9e 340 Pfam PF13377 Periplasmic binding protein-like domain 175 332 1.1E-34 T 12-10-2018 M892_17980 2d0416cbe42968d23a57c886df7d5f9e 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 9 54 5.0E-17 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M892_17980 2d0416cbe42968d23a57c886df7d5f9e 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 19 29 5.8E-5 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M892_17980 2d0416cbe42968d23a57c886df7d5f9e 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 9 19 5.8E-5 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M892_17980 2d0416cbe42968d23a57c886df7d5f9e 340 Gene3D G3DSA:3.40.50.2300 67 311 4.5E-73 T 12-10-2018 M892_17980 2d0416cbe42968d23a57c886df7d5f9e 340 ProSitePatterns PS00356 LacI-type HTH domain signature. 10 28 - T 12-10-2018 M892_17980 2d0416cbe42968d23a57c886df7d5f9e 340 SUPERFAMILY SSF53822 67 333 7.85E-74 T 12-10-2018 IPR028082 Periplasmic binding protein-like I M892_17980 2d0416cbe42968d23a57c886df7d5f9e 340 Gene3D G3DSA:1.10.260.40 1 63 3.3E-17 T 12-10-2018 M892_17980 2d0416cbe42968d23a57c886df7d5f9e 340 SUPERFAMILY SSF47413 8 56 1.21E-12 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 M892_17980 2d0416cbe42968d23a57c886df7d5f9e 340 SMART SM00354 7 77 2.2E-19 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M892_17980 2d0416cbe42968d23a57c886df7d5f9e 340 Gene3D G3DSA:3.40.50.2300 165 294 4.5E-73 T 12-10-2018 M892_06145 f8269f0fc4d80a2dee9930829e042870 284 Pfam PF00561 alpha/beta hydrolase fold 27 135 2.1E-17 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 M892_06145 f8269f0fc4d80a2dee9930829e042870 284 SUPERFAMILY SSF53474 3 282 9.05E-45 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_06145 f8269f0fc4d80a2dee9930829e042870 284 Gene3D G3DSA:3.40.50.1820 1 278 9.0E-48 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_25910 e85bf31a6c5c262c1db2f7dfc4f0f5b4 145 Pfam PF03382 Mycoplasma protein of unknown function, DUF285 70 125 3.3E-21 T 12-10-2018 IPR005046 Protein of unknown function DUF285 M892_25910 e85bf31a6c5c262c1db2f7dfc4f0f5b4 145 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 80 102 1.9E-5 T 12-10-2018 IPR011889 Bacterial surface protein 26-residue repeat M892_16180 69866e450821ac38b4f4752c423e0a1a 467 Gene3D G3DSA:1.10.8.60 319 398 5.7E-23 T 12-10-2018 M892_16180 69866e450821ac38b4f4752c423e0a1a 467 Gene3D G3DSA:3.40.50.2300 2 137 6.9E-33 T 12-10-2018 M892_16180 69866e450821ac38b4f4752c423e0a1a 467 SMART SM00382 167 310 5.1E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_16180 69866e450821ac38b4f4752c423e0a1a 467 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 233 248 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 M892_16180 69866e450821ac38b4f4752c423e0a1a 467 SUPERFAMILY SSF52540 147 390 2.93E-69 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_16180 69866e450821ac38b4f4752c423e0a1a 467 Gene3D G3DSA:1.10.10.60 412 456 2.8E-9 T 12-10-2018 M892_16180 69866e450821ac38b4f4752c423e0a1a 467 Gene3D G3DSA:3.40.50.300 138 318 2.1E-65 T 12-10-2018 M892_16180 69866e450821ac38b4f4752c423e0a1a 467 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 360 369 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site M892_16180 69866e450821ac38b4f4752c423e0a1a 467 SMART SM00448 11 122 1.5E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_16180 69866e450821ac38b4f4752c423e0a1a 467 Pfam PF00072 Response regulator receiver domain 14 122 1.2E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_16180 69866e450821ac38b4f4752c423e0a1a 467 Pfam PF00158 Sigma-54 interaction domain 148 313 3.1E-69 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 M892_16180 69866e450821ac38b4f4752c423e0a1a 467 SUPERFAMILY SSF46689 360 457 5.97E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_16180 69866e450821ac38b4f4752c423e0a1a 467 SUPERFAMILY SSF52172 12 191 1.57E-41 T 12-10-2018 IPR011006 CheY-like superfamily M892_16180 69866e450821ac38b4f4752c423e0a1a 467 Pfam PF02954 Bacterial regulatory protein, Fis family 418 458 1.6E-12 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M892_15230 41d3aaa4a2cee4ae261bec26c728b06b 488 Gene3D G3DSA:1.10.8.60 309 385 4.3E-24 T 12-10-2018 M892_15230 41d3aaa4a2cee4ae261bec26c728b06b 488 Pfam PF06490 Flagellar regulatory protein FleQ 6 114 7.8E-28 T 12-10-2018 IPR010518 Flagellar regulatory FleQ M892_15230 41d3aaa4a2cee4ae261bec26c728b06b 488 Pfam PF00158 Sigma-54 interaction domain 137 304 1.7E-72 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 M892_15230 41d3aaa4a2cee4ae261bec26c728b06b 488 Gene3D G3DSA:3.40.50.2300 1 117 2.1E-8 T 12-10-2018 M892_15230 41d3aaa4a2cee4ae261bec26c728b06b 488 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 161 174 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 M892_15230 41d3aaa4a2cee4ae261bec26c728b06b 488 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 223 238 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 M892_15230 41d3aaa4a2cee4ae261bec26c728b06b 488 SUPERFAMILY SSF46689 349 486 4.93E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_15230 41d3aaa4a2cee4ae261bec26c728b06b 488 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 349 358 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site M892_15230 41d3aaa4a2cee4ae261bec26c728b06b 488 Gene3D G3DSA:1.10.10.60 420 488 1.6E-13 T 12-10-2018 M892_15230 41d3aaa4a2cee4ae261bec26c728b06b 488 SMART SM00382 157 301 8.0E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_15230 41d3aaa4a2cee4ae261bec26c728b06b 488 SUPERFAMILY SSF52540 137 378 3.95E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_15230 41d3aaa4a2cee4ae261bec26c728b06b 488 Pfam PF02954 Bacterial regulatory protein, Fis family 444 484 8.5E-15 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M892_15230 41d3aaa4a2cee4ae261bec26c728b06b 488 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 450 467 1.3E-10 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M892_15230 41d3aaa4a2cee4ae261bec26c728b06b 488 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 467 487 1.3E-10 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M892_15230 41d3aaa4a2cee4ae261bec26c728b06b 488 Gene3D G3DSA:3.40.50.300 125 308 2.1E-65 T 12-10-2018 M892_02170 b36f6b3bc314e9f25192b00afc231421 456 PIRSF PIRSF006603 5 454 2.2E-61 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M892_02170 b36f6b3bc314e9f25192b00afc231421 456 Pfam PF01554 MatE 17 176 1.4E-35 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M892_02170 b36f6b3bc314e9f25192b00afc231421 456 Pfam PF01554 MatE 243 404 5.9E-39 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M892_02170 b36f6b3bc314e9f25192b00afc231421 456 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 421 1.0E-121 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M892_25670 800aa7138f89641e80cf5e5d7be1b7a0 527 Gene3D G3DSA:1.25.40.10 29 313 1.2E-13 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_25670 800aa7138f89641e80cf5e5d7be1b7a0 527 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 366 524 1.9E-33 T 12-10-2018 IPR000160 GGDEF domain M892_25670 800aa7138f89641e80cf5e5d7be1b7a0 527 Gene3D G3DSA:3.30.70.270 355 526 6.5E-43 T 12-10-2018 M892_25670 800aa7138f89641e80cf5e5d7be1b7a0 527 SUPERFAMILY SSF48452 36 227 8.44E-12 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_25670 800aa7138f89641e80cf5e5d7be1b7a0 527 Pfam PF00990 Diguanylate cyclase, GGDEF domain 370 522 6.7E-33 T 12-10-2018 IPR000160 GGDEF domain M892_25670 800aa7138f89641e80cf5e5d7be1b7a0 527 SMART SM00267 358 526 6.4E-30 T 12-10-2018 IPR000160 GGDEF domain M892_25670 800aa7138f89641e80cf5e5d7be1b7a0 527 SUPERFAMILY SSF55073 374 524 5.73E-36 T 12-10-2018 IPR029787 Nucleotide cyclase M892_17125 a6b77d4c01067ddbf46aeda350f4bf40 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 3.6E-13 T 12-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 M892_17125 a6b77d4c01067ddbf46aeda350f4bf40 188 PIRSF PIRSF005901 1 188 1.5E-59 T 12-10-2018 IPR020599 Translation elongation factor P/YeiP M892_17125 a6b77d4c01067ddbf46aeda350f4bf40 188 Gene3D G3DSA:2.40.50.140 131 188 2.0E-19 T 12-10-2018 M892_17125 a6b77d4c01067ddbf46aeda350f4bf40 188 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 2 188 42.354 T 12-10-2018 IPR011897 Translation elongation factor P-like, YeiP M892_17125 a6b77d4c01067ddbf46aeda350f4bf40 188 ProSitePatterns PS01275 Elongation factor P signature. 153 172 - T 12-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site M892_17125 a6b77d4c01067ddbf46aeda350f4bf40 188 Pfam PF09285 Elongation factor P, C-terminal 132 187 8.7E-19 T 12-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 M892_17125 a6b77d4c01067ddbf46aeda350f4bf40 188 SUPERFAMILY SSF50249 67 129 6.0E-12 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M892_17125 a6b77d4c01067ddbf46aeda350f4bf40 188 SMART SM01185 69 124 1.0E-14 T 12-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 M892_17125 a6b77d4c01067ddbf46aeda350f4bf40 188 SMART SM00841 132 187 3.1E-25 T 12-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 M892_17125 a6b77d4c01067ddbf46aeda350f4bf40 188 SUPERFAMILY SSF50249 132 188 1.88E-14 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M892_17125 a6b77d4c01067ddbf46aeda350f4bf40 188 Gene3D G3DSA:2.30.30.30 1 65 3.4E-15 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 M892_17125 a6b77d4c01067ddbf46aeda350f4bf40 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 62 1.4E-17 T 12-10-2018 IPR013185 Translation elongation factor, KOW-like M892_17125 a6b77d4c01067ddbf46aeda350f4bf40 188 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 3 188 9.2E-90 T 12-10-2018 IPR011897 Translation elongation factor P-like, YeiP M892_17125 a6b77d4c01067ddbf46aeda350f4bf40 188 SUPERFAMILY SSF50104 1 65 9.63E-12 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily M892_17125 a6b77d4c01067ddbf46aeda350f4bf40 188 Gene3D G3DSA:2.40.50.140 67 130 3.9E-15 T 12-10-2018 M892_05590 940112433a1f18b568983f15ee16ac7a 213 SUPERFAMILY SSF53098 50 207 7.71E-49 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_05590 940112433a1f18b568983f15ee16ac7a 213 Gene3D G3DSA:3.30.420.10 39 206 7.8E-18 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M892_05590 940112433a1f18b568983f15ee16ac7a 213 Pfam PF00665 Integrase core domain 52 163 5.6E-26 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 M892_22900 940112433a1f18b568983f15ee16ac7a 213 SUPERFAMILY SSF53098 50 207 7.71E-49 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_22900 940112433a1f18b568983f15ee16ac7a 213 Gene3D G3DSA:3.30.420.10 39 206 7.8E-18 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M892_22900 940112433a1f18b568983f15ee16ac7a 213 Pfam PF00665 Integrase core domain 52 163 5.6E-26 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 M892_28365 940112433a1f18b568983f15ee16ac7a 213 SUPERFAMILY SSF53098 50 207 7.71E-49 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_28365 940112433a1f18b568983f15ee16ac7a 213 Gene3D G3DSA:3.30.420.10 39 206 7.8E-18 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M892_28365 940112433a1f18b568983f15ee16ac7a 213 Pfam PF00665 Integrase core domain 52 163 5.6E-26 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 M892_21795 940112433a1f18b568983f15ee16ac7a 213 SUPERFAMILY SSF53098 50 207 7.71E-49 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_21795 940112433a1f18b568983f15ee16ac7a 213 Gene3D G3DSA:3.30.420.10 39 206 7.8E-18 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M892_21795 940112433a1f18b568983f15ee16ac7a 213 Pfam PF00665 Integrase core domain 52 163 5.6E-26 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 M892_03860 940112433a1f18b568983f15ee16ac7a 213 SUPERFAMILY SSF53098 50 207 7.71E-49 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_03860 940112433a1f18b568983f15ee16ac7a 213 Gene3D G3DSA:3.30.420.10 39 206 7.8E-18 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M892_03860 940112433a1f18b568983f15ee16ac7a 213 Pfam PF00665 Integrase core domain 52 163 5.6E-26 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 M892_23350 940112433a1f18b568983f15ee16ac7a 213 SUPERFAMILY SSF53098 50 207 7.71E-49 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_23350 940112433a1f18b568983f15ee16ac7a 213 Gene3D G3DSA:3.30.420.10 39 206 7.8E-18 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M892_23350 940112433a1f18b568983f15ee16ac7a 213 Pfam PF00665 Integrase core domain 52 163 5.6E-26 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 M892_04800 940112433a1f18b568983f15ee16ac7a 213 SUPERFAMILY SSF53098 50 207 7.71E-49 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_04800 940112433a1f18b568983f15ee16ac7a 213 Gene3D G3DSA:3.30.420.10 39 206 7.8E-18 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M892_04800 940112433a1f18b568983f15ee16ac7a 213 Pfam PF00665 Integrase core domain 52 163 5.6E-26 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 M892_01355 940112433a1f18b568983f15ee16ac7a 213 SUPERFAMILY SSF53098 50 207 7.71E-49 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_01355 940112433a1f18b568983f15ee16ac7a 213 Gene3D G3DSA:3.30.420.10 39 206 7.8E-18 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M892_01355 940112433a1f18b568983f15ee16ac7a 213 Pfam PF00665 Integrase core domain 52 163 5.6E-26 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 M892_16520 940112433a1f18b568983f15ee16ac7a 213 SUPERFAMILY SSF53098 50 207 7.71E-49 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_16520 940112433a1f18b568983f15ee16ac7a 213 Gene3D G3DSA:3.30.420.10 39 206 7.8E-18 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M892_16520 940112433a1f18b568983f15ee16ac7a 213 Pfam PF00665 Integrase core domain 52 163 5.6E-26 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 M892_21090 940112433a1f18b568983f15ee16ac7a 213 SUPERFAMILY SSF53098 50 207 7.71E-49 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_21090 940112433a1f18b568983f15ee16ac7a 213 Gene3D G3DSA:3.30.420.10 39 206 7.8E-18 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M892_21090 940112433a1f18b568983f15ee16ac7a 213 Pfam PF00665 Integrase core domain 52 163 5.6E-26 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 M892_16845 940112433a1f18b568983f15ee16ac7a 213 SUPERFAMILY SSF53098 50 207 7.71E-49 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_16845 940112433a1f18b568983f15ee16ac7a 213 Gene3D G3DSA:3.30.420.10 39 206 7.8E-18 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M892_16845 940112433a1f18b568983f15ee16ac7a 213 Pfam PF00665 Integrase core domain 52 163 5.6E-26 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 M892_01235 940112433a1f18b568983f15ee16ac7a 213 SUPERFAMILY SSF53098 50 207 7.71E-49 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_01235 940112433a1f18b568983f15ee16ac7a 213 Gene3D G3DSA:3.30.420.10 39 206 7.8E-18 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M892_01235 940112433a1f18b568983f15ee16ac7a 213 Pfam PF00665 Integrase core domain 52 163 5.6E-26 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 M892_01745 940112433a1f18b568983f15ee16ac7a 213 SUPERFAMILY SSF53098 50 207 7.71E-49 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_01745 940112433a1f18b568983f15ee16ac7a 213 Gene3D G3DSA:3.30.420.10 39 206 7.8E-18 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M892_01745 940112433a1f18b568983f15ee16ac7a 213 Pfam PF00665 Integrase core domain 52 163 5.6E-26 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 M892_23935 eff6ad1c29eeec2ca8998fba62c63f05 203 TIGRFAM TIGR04025 PPOX_FMN_DR2398: pyridoxamine 5'-phosphate oxidase, FMN-binding family 8 203 5.2E-72 T 12-10-2018 IPR024029 Pyridoxamine 5-phosphate oxidase, FMN-dependent M892_23935 eff6ad1c29eeec2ca8998fba62c63f05 203 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 30 122 3.3E-13 T 12-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 M892_23935 eff6ad1c29eeec2ca8998fba62c63f05 203 Gene3D G3DSA:2.30.110.10 19 147 5.9E-23 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 M892_23935 eff6ad1c29eeec2ca8998fba62c63f05 203 SUPERFAMILY SSF50475 22 160 4.75E-16 T 12-10-2018 M892_11165 88111689179909a8d4c0c720f7cff906 828 Pfam PF00563 EAL domain 598 824 2.6E-55 T 12-10-2018 IPR001633 EAL domain M892_11165 88111689179909a8d4c0c720f7cff906 828 Pfam PF00990 Diguanylate cyclase, GGDEF domain 415 477 5.9E-6 T 12-10-2018 IPR000160 GGDEF domain M892_11165 88111689179909a8d4c0c720f7cff906 828 Pfam PF10442 FIST C domain 215 338 1.6E-11 T 12-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 M892_11165 88111689179909a8d4c0c720f7cff906 828 SMART SM00267 402 577 0.0083 T 12-10-2018 IPR000160 GGDEF domain M892_11165 88111689179909a8d4c0c720f7cff906 828 SMART SM00052 590 828 7.5E-30 T 12-10-2018 IPR001633 EAL domain M892_11165 88111689179909a8d4c0c720f7cff906 828 SMART SM01204 215 341 5.3E-16 T 12-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 M892_11165 88111689179909a8d4c0c720f7cff906 828 Gene3D G3DSA:3.20.20.450 594 827 4.7E-58 T 12-10-2018 IPR035919 EAL domain superfamily M892_11165 88111689179909a8d4c0c720f7cff906 828 Pfam PF08495 FIST N domain 30 212 1.2E-18 T 12-10-2018 IPR013702 FIST domain, N-terminal M892_11165 88111689179909a8d4c0c720f7cff906 828 SMART SM00897 28 214 1.5E-29 T 12-10-2018 IPR013702 FIST domain, N-terminal M892_11165 88111689179909a8d4c0c720f7cff906 828 SUPERFAMILY SSF141868 598 825 2.22E-56 T 12-10-2018 IPR035919 EAL domain superfamily M892_11165 88111689179909a8d4c0c720f7cff906 828 Gene3D G3DSA:3.30.70.270 399 568 9.5E-14 T 12-10-2018 M892_11165 88111689179909a8d4c0c720f7cff906 828 SUPERFAMILY SSF55073 419 549 8.63E-8 T 12-10-2018 IPR029787 Nucleotide cyclase M892_06170 8dfb40e92f891c9b4ac9400c34df8edf 277 SUPERFAMILY SSF55021 4 59 1.79E-8 T 12-10-2018 M892_06170 8dfb40e92f891c9b4ac9400c34df8edf 277 Gene3D G3DSA:3.30.70.260 1 79 3.0E-15 T 12-10-2018 M892_06170 8dfb40e92f891c9b4ac9400c34df8edf 277 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 5 277 2.6E-123 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 M892_06170 8dfb40e92f891c9b4ac9400c34df8edf 277 Pfam PF01842 ACT domain 5 66 2.6E-7 T 12-10-2018 IPR002912 ACT domain M892_06170 8dfb40e92f891c9b4ac9400c34df8edf 277 Gene3D G3DSA:3.40.50.170 81 277 9.4E-68 T 12-10-2018 M892_06170 8dfb40e92f891c9b4ac9400c34df8edf 277 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 1 277 45.332 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 M892_06170 8dfb40e92f891c9b4ac9400c34df8edf 277 SUPERFAMILY SSF53328 82 276 1.57E-60 T 12-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 M892_06170 8dfb40e92f891c9b4ac9400c34df8edf 277 PIRSF PIRSF036480 1 277 4.3E-112 T 12-10-2018 M892_06170 8dfb40e92f891c9b4ac9400c34df8edf 277 Pfam PF00551 Formyl transferase 82 259 1.1E-49 T 12-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 M892_06170 8dfb40e92f891c9b4ac9400c34df8edf 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 229 251 9.7E-65 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 M892_06170 8dfb40e92f891c9b4ac9400c34df8edf 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 83 105 9.7E-65 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 M892_06170 8dfb40e92f891c9b4ac9400c34df8edf 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 105 132 9.7E-65 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 M892_06170 8dfb40e92f891c9b4ac9400c34df8edf 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 251 276 9.7E-65 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 M892_06170 8dfb40e92f891c9b4ac9400c34df8edf 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 6 32 9.7E-65 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 M892_06170 8dfb40e92f891c9b4ac9400c34df8edf 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 38 50 9.7E-65 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 M892_10990 d0751f1aed659faed1c9f3ce85de4f18 279 Pfam PF02311 AraC-like ligand binding domain 27 147 2.3E-21 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 M892_10990 d0751f1aed659faed1c9f3ce85de4f18 279 Pfam PF12833 Helix-turn-helix domain 206 278 7.6E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M892_10990 d0751f1aed659faed1c9f3ce85de4f18 279 SUPERFAMILY SSF51215 37 147 2.22E-18 T 12-10-2018 IPR037923 Transcription regulator HTH-like M892_10990 d0751f1aed659faed1c9f3ce85de4f18 279 Gene3D G3DSA:1.10.10.60 241 279 2.6E-10 T 12-10-2018 M892_10990 d0751f1aed659faed1c9f3ce85de4f18 279 Gene3D G3DSA:2.60.120.10 7 100 4.8E-5 T 12-10-2018 IPR014710 RmlC-like jelly roll fold M892_10990 d0751f1aed659faed1c9f3ce85de4f18 279 SUPERFAMILY SSF46689 181 229 2.55E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_10990 d0751f1aed659faed1c9f3ce85de4f18 279 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 262 278 2.8E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 M892_10990 d0751f1aed659faed1c9f3ce85de4f18 279 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 247 262 2.8E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 M892_10990 d0751f1aed659faed1c9f3ce85de4f18 279 SUPERFAMILY SSF46689 232 277 8.06E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_10990 d0751f1aed659faed1c9f3ce85de4f18 279 Gene3D G3DSA:1.10.10.60 183 240 1.0E-13 T 12-10-2018 M892_10990 d0751f1aed659faed1c9f3ce85de4f18 279 SMART SM00342 196 278 3.0E-22 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M892_18505 78491ea1130211d26889d344f3fcff9b 80 SUPERFAMILY SSF46689 29 72 4.3E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_18505 78491ea1130211d26889d344f3fcff9b 80 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 60 80 2.1E-5 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M892_18505 78491ea1130211d26889d344f3fcff9b 80 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 43 60 2.1E-5 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M892_18505 78491ea1130211d26889d344f3fcff9b 80 Pfam PF02954 Bacterial regulatory protein, Fis family 43 72 1.6E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M892_18505 78491ea1130211d26889d344f3fcff9b 80 Gene3D G3DSA:1.10.10.60 2 78 1.3E-11 T 12-10-2018 M892_18365 ec2e0821de9629c4e3eff2eb25e8023f 204 Pfam PF02581 Thiamine monophosphate synthase 6 186 8.0E-66 T 12-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 M892_18365 ec2e0821de9629c4e3eff2eb25e8023f 204 Gene3D G3DSA:3.20.20.70 1 204 6.5E-72 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M892_18365 ec2e0821de9629c4e3eff2eb25e8023f 204 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 5 197 1.8E-66 T 12-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 M892_18365 ec2e0821de9629c4e3eff2eb25e8023f 204 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 4 204 27.875 T 12-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 M892_18365 ec2e0821de9629c4e3eff2eb25e8023f 204 SUPERFAMILY SSF51391 3 202 2.35E-68 T 12-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 M892_05735 29327c1efa566a81e2a7d54b7a37a1f1 117 Pfam PF05717 IS66 Orf2 like protein 9 103 1.9E-32 T 12-10-2018 IPR008878 Transposase IS66, Orf2 M892_07210 29327c1efa566a81e2a7d54b7a37a1f1 117 Pfam PF05717 IS66 Orf2 like protein 9 103 1.9E-32 T 12-10-2018 IPR008878 Transposase IS66, Orf2 M892_16505 29327c1efa566a81e2a7d54b7a37a1f1 117 Pfam PF05717 IS66 Orf2 like protein 9 103 1.9E-32 T 12-10-2018 IPR008878 Transposase IS66, Orf2 M892_23925 29327c1efa566a81e2a7d54b7a37a1f1 117 Pfam PF05717 IS66 Orf2 like protein 9 103 1.9E-32 T 12-10-2018 IPR008878 Transposase IS66, Orf2 M892_23490 29327c1efa566a81e2a7d54b7a37a1f1 117 Pfam PF05717 IS66 Orf2 like protein 9 103 1.9E-32 T 12-10-2018 IPR008878 Transposase IS66, Orf2 M892_17815 29327c1efa566a81e2a7d54b7a37a1f1 117 Pfam PF05717 IS66 Orf2 like protein 9 103 1.9E-32 T 12-10-2018 IPR008878 Transposase IS66, Orf2 M892_04250 29327c1efa566a81e2a7d54b7a37a1f1 117 Pfam PF05717 IS66 Orf2 like protein 9 103 1.9E-32 T 12-10-2018 IPR008878 Transposase IS66, Orf2 M892_21600 29327c1efa566a81e2a7d54b7a37a1f1 117 Pfam PF05717 IS66 Orf2 like protein 9 103 1.9E-32 T 12-10-2018 IPR008878 Transposase IS66, Orf2 M892_03170 29327c1efa566a81e2a7d54b7a37a1f1 117 Pfam PF05717 IS66 Orf2 like protein 9 103 1.9E-32 T 12-10-2018 IPR008878 Transposase IS66, Orf2 M892_03140 29327c1efa566a81e2a7d54b7a37a1f1 117 Pfam PF05717 IS66 Orf2 like protein 9 103 1.9E-32 T 12-10-2018 IPR008878 Transposase IS66, Orf2 M892_04895 29327c1efa566a81e2a7d54b7a37a1f1 117 Pfam PF05717 IS66 Orf2 like protein 9 103 1.9E-32 T 12-10-2018 IPR008878 Transposase IS66, Orf2 M892_05760 29327c1efa566a81e2a7d54b7a37a1f1 117 Pfam PF05717 IS66 Orf2 like protein 9 103 1.9E-32 T 12-10-2018 IPR008878 Transposase IS66, Orf2 M892_07420 29327c1efa566a81e2a7d54b7a37a1f1 117 Pfam PF05717 IS66 Orf2 like protein 9 103 1.9E-32 T 12-10-2018 IPR008878 Transposase IS66, Orf2 M892_22155 29327c1efa566a81e2a7d54b7a37a1f1 117 Pfam PF05717 IS66 Orf2 like protein 9 103 1.9E-32 T 12-10-2018 IPR008878 Transposase IS66, Orf2 M892_11715 29327c1efa566a81e2a7d54b7a37a1f1 117 Pfam PF05717 IS66 Orf2 like protein 9 103 1.9E-32 T 12-10-2018 IPR008878 Transposase IS66, Orf2 M892_24515 29327c1efa566a81e2a7d54b7a37a1f1 117 Pfam PF05717 IS66 Orf2 like protein 9 103 1.9E-32 T 12-10-2018 IPR008878 Transposase IS66, Orf2 M892_00605 29327c1efa566a81e2a7d54b7a37a1f1 117 Pfam PF05717 IS66 Orf2 like protein 9 103 1.9E-32 T 12-10-2018 IPR008878 Transposase IS66, Orf2 M892_01525 29327c1efa566a81e2a7d54b7a37a1f1 117 Pfam PF05717 IS66 Orf2 like protein 9 103 1.9E-32 T 12-10-2018 IPR008878 Transposase IS66, Orf2 M892_05005 29327c1efa566a81e2a7d54b7a37a1f1 117 Pfam PF05717 IS66 Orf2 like protein 9 103 1.9E-32 T 12-10-2018 IPR008878 Transposase IS66, Orf2 M892_05645 29327c1efa566a81e2a7d54b7a37a1f1 117 Pfam PF05717 IS66 Orf2 like protein 9 103 1.9E-32 T 12-10-2018 IPR008878 Transposase IS66, Orf2 M892_25860 29327c1efa566a81e2a7d54b7a37a1f1 117 Pfam PF05717 IS66 Orf2 like protein 9 103 1.9E-32 T 12-10-2018 IPR008878 Transposase IS66, Orf2 M892_17770 29327c1efa566a81e2a7d54b7a37a1f1 117 Pfam PF05717 IS66 Orf2 like protein 9 103 1.9E-32 T 12-10-2018 IPR008878 Transposase IS66, Orf2 M892_28255 29327c1efa566a81e2a7d54b7a37a1f1 117 Pfam PF05717 IS66 Orf2 like protein 9 103 1.9E-32 T 12-10-2018 IPR008878 Transposase IS66, Orf2 M892_03025 29327c1efa566a81e2a7d54b7a37a1f1 117 Pfam PF05717 IS66 Orf2 like protein 9 103 1.9E-32 T 12-10-2018 IPR008878 Transposase IS66, Orf2 M892_24995 29327c1efa566a81e2a7d54b7a37a1f1 117 Pfam PF05717 IS66 Orf2 like protein 9 103 1.9E-32 T 12-10-2018 IPR008878 Transposase IS66, Orf2 M892_23730 7b29c7d0d354046119fe229294556036 242 SMART SM00448 21 133 6.0E-44 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_23730 7b29c7d0d354046119fe229294556036 242 Gene3D G3DSA:1.10.10.10 146 242 1.4E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_23730 7b29c7d0d354046119fe229294556036 242 Pfam PF00486 Transcriptional regulatory protein, C terminal 166 240 8.6E-18 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M892_23730 7b29c7d0d354046119fe229294556036 242 SUPERFAMILY SSF52172 21 141 1.71E-38 T 12-10-2018 IPR011006 CheY-like superfamily M892_23730 7b29c7d0d354046119fe229294556036 242 Pfam PF00072 Response regulator receiver domain 23 133 4.5E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_23730 7b29c7d0d354046119fe229294556036 242 SUPERFAMILY SSF46894 142 240 3.97E-19 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M892_23730 7b29c7d0d354046119fe229294556036 242 Gene3D G3DSA:3.40.50.2300 9 144 9.2E-38 T 12-10-2018 M892_23730 7b29c7d0d354046119fe229294556036 242 SMART SM00862 166 240 7.3E-16 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M892_13095 90174d50890adb2d2b77dfc30c8c893e 416 Pfam PF11871 Domain of unknown function (DUF3391) 4 135 1.9E-28 T 12-10-2018 IPR021812 Protein of unknown function DUF3391 M892_13095 90174d50890adb2d2b77dfc30c8c893e 416 TIGRFAM TIGR00277 HDIG: HDIG domain 165 258 6.5E-8 T 12-10-2018 IPR006675 HDIG domain M892_13095 90174d50890adb2d2b77dfc30c8c893e 416 Gene3D G3DSA:1.10.3210.10 21 329 1.5E-53 T 12-10-2018 M892_13095 90174d50890adb2d2b77dfc30c8c893e 416 SUPERFAMILY SSF109604 159 329 5.32E-25 T 12-10-2018 M892_13095 90174d50890adb2d2b77dfc30c8c893e 416 SMART SM00471 163 299 5.7E-7 T 12-10-2018 IPR003607 HD/PDEase domain M892_13095 90174d50890adb2d2b77dfc30c8c893e 416 Pfam PF01966 HD domain 169 289 5.6E-15 T 12-10-2018 IPR006674 HD domain M892_24295 23199236e4868b3a7772dced4645aa59 232 SUPERFAMILY SSF53335 46 231 2.3E-28 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M892_24295 23199236e4868b3a7772dced4645aa59 232 Pfam PF08242 Methyltransferase domain 82 177 6.9E-15 T 12-10-2018 IPR013217 Methyltransferase type 12 M892_24295 23199236e4868b3a7772dced4645aa59 232 Gene3D G3DSA:3.40.50.150 35 220 1.3E-27 T 12-10-2018 M892_11530 df7d9049bfa0b98062c4f667cecd1a45 1342 Gene3D G3DSA:2.40.270.10 790 833 1.1E-6 T 12-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M892_11530 df7d9049bfa0b98062c4f667cecd1a45 1342 Gene3D G3DSA:2.40.50.100 714 788 3.4E-32 T 12-10-2018 M892_11530 df7d9049bfa0b98062c4f667cecd1a45 1342 Gene3D G3DSA:2.40.50.150 834 954 2.6E-44 T 12-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M892_11530 df7d9049bfa0b98062c4f667cecd1a45 1342 Pfam PF04565 RNA polymerase Rpb2, domain 3 513 580 7.3E-29 T 12-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M892_11530 df7d9049bfa0b98062c4f667cecd1a45 1342 Gene3D G3DSA:3.90.1100.10 19 156 3.4E-48 T 12-10-2018 M892_11530 df7d9049bfa0b98062c4f667cecd1a45 1342 Pfam PF10385 RNA polymerase beta subunit external 1 domain 591 656 2.2E-21 T 12-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M892_11530 df7d9049bfa0b98062c4f667cecd1a45 1342 SUPERFAMILY SSF64484 11 1341 0.0 T 12-10-2018 M892_11530 df7d9049bfa0b98062c4f667cecd1a45 1342 Gene3D G3DSA:3.90.1110.10 157 262 1.9E-27 T 12-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M892_11530 df7d9049bfa0b98062c4f667cecd1a45 1342 Pfam PF04560 RNA polymerase Rpb2, domain 7 1265 1339 3.0E-27 T 12-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M892_11530 df7d9049bfa0b98062c4f667cecd1a45 1342 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1341 12.274 T 12-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M892_11530 df7d9049bfa0b98062c4f667cecd1a45 1342 Gene3D G3DSA:3.90.1110.10 300 441 7.8E-35 T 12-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M892_11530 df7d9049bfa0b98062c4f667cecd1a45 1342 Gene3D G3DSA:3.90.1800.10 1251 1305 8.1E-11 T 12-10-2018 M892_11530 df7d9049bfa0b98062c4f667cecd1a45 1342 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1338 0.0 T 12-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M892_11530 df7d9049bfa0b98062c4f667cecd1a45 1342 Pfam PF04563 RNA polymerase beta subunit 26 500 2.0E-57 T 12-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M892_11530 df7d9049bfa0b98062c4f667cecd1a45 1342 Pfam PF00562 RNA polymerase Rpb2, domain 6 717 1263 6.4E-157 T 12-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M892_11530 df7d9049bfa0b98062c4f667cecd1a45 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 151 223 1.6E-7 T 12-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M892_11530 df7d9049bfa0b98062c4f667cecd1a45 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 337 454 6.7E-17 T 12-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M892_11530 df7d9049bfa0b98062c4f667cecd1a45 1342 Gene3D G3DSA:3.90.1100.10 646 713 1.8E-21 T 12-10-2018 M892_11530 df7d9049bfa0b98062c4f667cecd1a45 1342 Gene3D G3DSA:3.90.1100.10 442 611 2.7E-65 T 12-10-2018 M892_11530 df7d9049bfa0b98062c4f667cecd1a45 1342 Gene3D G3DSA:2.40.270.10 1035 1241 8.7E-88 T 12-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M892_11530 df7d9049bfa0b98062c4f667cecd1a45 1342 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1063 1075 - T 12-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M892_04625 0b76cec366424b1338b31ea41945b83d 114 TIGRFAM TIGR02497 yscI_hrpB_dom: type III secretion apparatus protein, YscI/HrpB, C-terminal domain 76 114 6.6E-14 T 12-10-2018 IPR012670 Type III secretion system, YscI/HrpB GO:0009306 M892_04625 0b76cec366424b1338b31ea41945b83d 114 Pfam PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI 28 114 1.8E-26 T 12-10-2018 IPR012670 Type III secretion system, YscI/HrpB GO:0009306 M892_15885 6f11c6ec98b9e1414e0ed8caa7b7d956 75 SUPERFAMILY SSF158651 1 73 9.55E-29 T 12-10-2018 IPR023202 YejL-like superfamily M892_15885 6f11c6ec98b9e1414e0ed8caa7b7d956 75 Gene3D G3DSA:1.10.3390.10 1 75 1.1E-31 T 12-10-2018 IPR023202 YejL-like superfamily M892_15885 6f11c6ec98b9e1414e0ed8caa7b7d956 75 Hamap MF_00816 UPF0352 protein YejL [yejL]. 1 71 23.28 T 12-10-2018 IPR009857 Uncharacterised protein family UPF0352 M892_15885 6f11c6ec98b9e1414e0ed8caa7b7d956 75 Pfam PF07208 Protein of unknown function (DUF1414) 26 69 7.3E-20 T 12-10-2018 IPR009857 Uncharacterised protein family UPF0352 M892_15885 6f11c6ec98b9e1414e0ed8caa7b7d956 75 PIRSF PIRSF006188 1 72 1.6E-36 T 12-10-2018 IPR009857 Uncharacterised protein family UPF0352 M892_15885 6f11c6ec98b9e1414e0ed8caa7b7d956 75 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 1 69 3.0E-30 T 12-10-2018 IPR009857 Uncharacterised protein family UPF0352 M892_09755 3c5dbc8fa4bd7a2c6a291cf1762f128f 260 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 17 258 5.7E-104 T 12-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 M892_09755 3c5dbc8fa4bd7a2c6a291cf1762f128f 260 Pfam PF00561 alpha/beta hydrolase fold 22 247 9.5E-26 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 M892_09755 3c5dbc8fa4bd7a2c6a291cf1762f128f 260 Gene3D G3DSA:3.40.50.1820 6 259 6.2E-65 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_09755 3c5dbc8fa4bd7a2c6a291cf1762f128f 260 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 11 260 45.615 T 12-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 M892_09755 3c5dbc8fa4bd7a2c6a291cf1762f128f 260 SUPERFAMILY SSF53474 9 258 3.81E-48 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_07540 e59769f99331e8fb6b02ec267c09be63 487 PIRSF PIRSF000130 1 487 5.3E-200 T 12-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 M892_07540 e59769f99331e8fb6b02ec267c09be63 487 SMART SM00116 158 206 2.0E-5 T 12-10-2018 IPR000644 CBS domain M892_07540 e59769f99331e8fb6b02ec267c09be63 487 SMART SM00116 96 144 1.3E-11 T 12-10-2018 IPR000644 CBS domain M892_07540 e59769f99331e8fb6b02ec267c09be63 487 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 473 4.7E-161 T 12-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 M892_07540 e59769f99331e8fb6b02ec267c09be63 487 SUPERFAMILY SSF54631 95 203 1.11E-25 T 12-10-2018 M892_07540 e59769f99331e8fb6b02ec267c09be63 487 SMART SM01240 7 473 0.0 T 12-10-2018 M892_07540 e59769f99331e8fb6b02ec267c09be63 487 SUPERFAMILY SSF51412 1 477 1.96E-125 T 12-10-2018 M892_07540 e59769f99331e8fb6b02ec267c09be63 487 Gene3D G3DSA:3.20.20.70 1 486 4.8E-210 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M892_07540 e59769f99331e8fb6b02ec267c09be63 487 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 454 8.7E-196 T 12-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 M892_07540 e59769f99331e8fb6b02ec267c09be63 487 Pfam PF00571 CBS domain 95 140 1.2E-9 T 12-10-2018 IPR000644 CBS domain M892_07540 e59769f99331e8fb6b02ec267c09be63 487 Pfam PF00571 CBS domain 149 201 0.0015 T 12-10-2018 IPR000644 CBS domain M892_07540 e59769f99331e8fb6b02ec267c09be63 487 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 12-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 M892_07540 e59769f99331e8fb6b02ec267c09be63 487 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 486 84.338 T 12-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 M892_00655 1ee44b811d5ead64caf72afcf8e4bc4b 324 Gene3D G3DSA:3.10.450.50 18 157 2.6E-20 T 12-10-2018 M892_00655 1ee44b811d5ead64caf72afcf8e4bc4b 324 Gene3D G3DSA:3.10.450.50 190 323 6.0E-17 T 12-10-2018 M892_00655 1ee44b811d5ead64caf72afcf8e4bc4b 324 SUPERFAMILY SSF54427 12 152 2.81E-25 T 12-10-2018 IPR032710 NTF2-like domain superfamily M892_00655 1ee44b811d5ead64caf72afcf8e4bc4b 324 SUPERFAMILY SSF54427 191 319 6.95E-21 T 12-10-2018 IPR032710 NTF2-like domain superfamily M892_00655 1ee44b811d5ead64caf72afcf8e4bc4b 324 Pfam PF07366 SnoaL-like polyketide cyclase 20 144 2.8E-10 T 12-10-2018 IPR009959 Polyketide cyclase SnoaL-like GO:0030638 MetaCyc: PWY-7352|MetaCyc: PWY-7354 M892_27865 53825f0a09212f9d077b7fecbf8e7526 365 Gene3D G3DSA:3.50.50.60 91 365 6.8E-53 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_27865 53825f0a09212f9d077b7fecbf8e7526 365 Gene3D G3DSA:3.50.50.60 1 80 2.6E-13 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_27865 53825f0a09212f9d077b7fecbf8e7526 365 Pfam PF01593 Flavin containing amine oxidoreductase 111 356 1.1E-24 T 12-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 M892_27865 53825f0a09212f9d077b7fecbf8e7526 365 SUPERFAMILY SSF51905 1 363 8.2E-38 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_27865 53825f0a09212f9d077b7fecbf8e7526 365 SUPERFAMILY SSF54373 205 304 6.15E-25 T 12-10-2018 M892_27865 53825f0a09212f9d077b7fecbf8e7526 365 Pfam PF13450 NAD(P)-binding Rossmann-like domain 7 78 2.1E-16 T 12-10-2018 M892_18025 2f307deaa099b74dbb8338bca2da7454 279 SUPERFAMILY SSF53474 4 277 2.81E-91 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_18025 2f307deaa099b74dbb8338bca2da7454 279 Pfam PF00756 Putative esterase 23 271 2.1E-62 T 12-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 M892_18025 2f307deaa099b74dbb8338bca2da7454 279 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 5 277 9.3E-124 T 12-10-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 M892_18025 2f307deaa099b74dbb8338bca2da7454 279 Gene3D G3DSA:3.40.50.1820 3 278 6.8E-97 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_14970 f7151de490f52d7ddeb7bdf9e5e36ce1 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 319 1.3E-163 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 M892_14970 f7151de490f52d7ddeb7bdf9e5e36ce1 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 319 50.686 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 M892_14970 f7151de490f52d7ddeb7bdf9e5e36ce1 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 6 151 1.1E-63 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 M892_14970 f7151de490f52d7ddeb7bdf9e5e36ce1 319 SUPERFAMILY SSF52096 5 318 1.3E-105 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily M892_14970 f7151de490f52d7ddeb7bdf9e5e36ce1 319 Gene3D G3DSA:3.90.226.10 4 319 4.7E-121 T 12-10-2018 M892_14970 f7151de490f52d7ddeb7bdf9e5e36ce1 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 172 185 8.3E-49 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 M892_14970 f7151de490f52d7ddeb7bdf9e5e36ce1 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 200 209 8.3E-49 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 M892_14970 f7151de490f52d7ddeb7bdf9e5e36ce1 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 156 169 8.3E-49 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 M892_14970 f7151de490f52d7ddeb7bdf9e5e36ce1 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 116 134 8.3E-49 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 M892_14970 f7151de490f52d7ddeb7bdf9e5e36ce1 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 137 153 8.3E-49 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 M892_14970 f7151de490f52d7ddeb7bdf9e5e36ce1 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 91 102 8.3E-49 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 M892_10460 66d6e551e81b87f9bd609fdeeeeb00a5 391 SUPERFAMILY SSF53901 266 390 3.79E-44 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M892_10460 66d6e551e81b87f9bd609fdeeeeb00a5 391 ProSitePatterns PS00737 Thiolases signature 2. 337 353 - T 12-10-2018 IPR020613 Thiolase, conserved site GO:0016747 M892_10460 66d6e551e81b87f9bd609fdeeeeb00a5 391 PIRSF PIRSF000429 2 391 1.5E-133 T 12-10-2018 IPR002155 Thiolase GO:0016747 M892_10460 66d6e551e81b87f9bd609fdeeeeb00a5 391 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 10 389 1.6E-142 T 12-10-2018 IPR002155 Thiolase GO:0016747 M892_10460 66d6e551e81b87f9bd609fdeeeeb00a5 391 Pfam PF00108 Thiolase, N-terminal domain 8 258 1.5E-83 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 M892_10460 66d6e551e81b87f9bd609fdeeeeb00a5 391 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 7 391 5.2E-241 T 12-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 M892_10460 66d6e551e81b87f9bd609fdeeeeb00a5 391 Gene3D G3DSA:3.40.47.10 8 271 1.6E-151 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M892_10460 66d6e551e81b87f9bd609fdeeeeb00a5 391 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 91 109 - T 12-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 M892_10460 66d6e551e81b87f9bd609fdeeeeb00a5 391 ProSitePatterns PS00099 Thiolases active site. 372 385 - T 12-10-2018 IPR020610 Thiolase, active site GO:0016747 M892_10460 66d6e551e81b87f9bd609fdeeeeb00a5 391 Gene3D G3DSA:3.40.47.10 138 385 1.6E-151 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M892_10460 66d6e551e81b87f9bd609fdeeeeb00a5 391 Pfam PF02803 Thiolase, C-terminal domain 266 390 2.0E-49 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 M892_10460 66d6e551e81b87f9bd609fdeeeeb00a5 391 SUPERFAMILY SSF53901 4 263 1.43E-78 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M892_10460 66d6e551e81b87f9bd609fdeeeeb00a5 391 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 5 391 60.481 T 12-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 M892_14710 42782f1134709c8a3868c21115eba70a 433 SUPERFAMILY SSF53335 242 417 1.48E-26 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M892_14710 42782f1134709c8a3868c21115eba70a 433 Pfam PF08468 Methyltransferase small domain N-terminal 96 214 7.1E-6 T 12-10-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 M892_14710 42782f1134709c8a3868c21115eba70a 433 Gene3D G3DSA:3.40.50.150 56 230 3.3E-51 T 12-10-2018 M892_14710 42782f1134709c8a3868c21115eba70a 433 PIRSF PIRSF037565 49 425 1.7E-169 T 12-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 M892_14710 42782f1134709c8a3868c21115eba70a 433 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 50 424 48.793 T 12-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 M892_14710 42782f1134709c8a3868c21115eba70a 433 Pfam PF05175 Methyltransferase small domain 248 421 3.5E-54 T 12-10-2018 IPR007848 Methyltransferase small domain GO:0008168 M892_14710 42782f1134709c8a3868c21115eba70a 433 Gene3D G3DSA:3.40.50.150 236 428 1.0E-45 T 12-10-2018 M892_22340 07ee2b43afb830d3085353c643fffc61 437 SUPERFAMILY SSF82171 88 186 8.24E-7 T 12-10-2018 M892_25020 b5b22a7f921b4369794a0b1d4d42cd25 332 SUPERFAMILY SSF46689 281 331 2.06E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_25020 b5b22a7f921b4369794a0b1d4d42cd25 332 Gene3D G3DSA:1.10.10.60 226 332 1.1E-19 T 12-10-2018 M892_25020 b5b22a7f921b4369794a0b1d4d42cd25 332 Pfam PF12833 Helix-turn-helix domain 252 329 1.1E-15 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M892_25020 b5b22a7f921b4369794a0b1d4d42cd25 332 SMART SM00342 246 328 1.4E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M892_25020 b5b22a7f921b4369794a0b1d4d42cd25 332 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 23 201 1.8E-22 T 12-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal M892_27155 69c6e78d238f9a96a5d00a6352882149 187 SUPERFAMILY SSF52499 2 183 5.89E-49 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 M892_27155 69c6e78d238f9a96a5d00a6352882149 187 Gene3D G3DSA:3.40.50.850 1 184 7.1E-55 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 M892_27155 69c6e78d238f9a96a5d00a6352882149 187 Pfam PF00857 Isochorismatase family 4 151 2.0E-38 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 M892_06370 cf06bb47a6b4d353b347e5206553e85c 462 Pfam PF00854 POT family 231 405 3.9E-31 T 12-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 M892_06370 cf06bb47a6b4d353b347e5206553e85c 462 Pfam PF00854 POT family 85 197 2.2E-29 T 12-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 M892_06370 cf06bb47a6b4d353b347e5206553e85c 462 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 153 165 - T 12-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 M892_06370 cf06bb47a6b4d353b347e5206553e85c 462 SUPERFAMILY SSF103473 7 435 1.96E-42 T 12-10-2018 IPR036259 MFS transporter superfamily M892_06370 cf06bb47a6b4d353b347e5206553e85c 462 Gene3D G3DSA:1.20.1250.20 2 208 2.3E-67 T 12-10-2018 M892_06370 cf06bb47a6b4d353b347e5206553e85c 462 Gene3D G3DSA:1.20.1250.20 212 455 3.8E-61 T 12-10-2018 M892_06370 cf06bb47a6b4d353b347e5206553e85c 462 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 225 440 3.4E-47 T 12-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 M892_06370 cf06bb47a6b4d353b347e5206553e85c 462 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 6 214 1.1E-58 T 12-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 M892_16665 c0926a7ed8fa876f6ae18e5b06b81976 615 SUPERFAMILY SSF53850 45 568 1.32E-91 T 12-10-2018 M892_16665 c0926a7ed8fa876f6ae18e5b06b81976 615 PIRSF PIRSF002741 2 576 2.0E-63 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 M892_16665 c0926a7ed8fa876f6ae18e5b06b81976 615 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 93 488 6.5E-58 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain M892_16665 c0926a7ed8fa876f6ae18e5b06b81976 615 Gene3D G3DSA:3.10.105.10 322 548 2.1E-39 T 12-10-2018 M892_16665 c0926a7ed8fa876f6ae18e5b06b81976 615 Gene3D G3DSA:3.40.190.10 17 321 3.2E-43 T 12-10-2018 M892_06565 cdd3d406a4188562a096d33d5ac6fb16 262 Pfam PF00460 Flagella basal body rod protein 5 35 3.6E-12 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 M892_06565 cdd3d406a4188562a096d33d5ac6fb16 262 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 261 4.5E-117 T 12-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 M892_06565 cdd3d406a4188562a096d33d5ac6fb16 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 147 244 3.6E-30 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G M892_06565 cdd3d406a4188562a096d33d5ac6fb16 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 137 2.2E-41 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G M892_06565 cdd3d406a4188562a096d33d5ac6fb16 262 SUPERFAMILY SSF117143 93 223 3.66E-35 T 12-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like M892_06565 cdd3d406a4188562a096d33d5ac6fb16 262 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 184 260 9.1E-24 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain M892_06565 cdd3d406a4188562a096d33d5ac6fb16 262 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site M892_12200 3d890e04ad3c9655e64a2a3478efc906 345 Pfam PF00579 tRNA synthetases class I (W and Y) 3 296 7.9E-76 T 12-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 M892_12200 3d890e04ad3c9655e64a2a3478efc906 345 Gene3D G3DSA:1.10.240.10 198 311 5.1E-137 T 12-10-2018 M892_12200 3d890e04ad3c9655e64a2a3478efc906 345 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 66 85 3.7E-26 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 M892_12200 3d890e04ad3c9655e64a2a3478efc906 345 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 149 170 3.7E-26 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 M892_12200 3d890e04ad3c9655e64a2a3478efc906 345 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 205 215 3.7E-26 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 M892_12200 3d890e04ad3c9655e64a2a3478efc906 345 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 3.7E-26 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 M892_12200 3d890e04ad3c9655e64a2a3478efc906 345 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 342 40.485 T 12-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 M892_12200 3d890e04ad3c9655e64a2a3478efc906 345 Gene3D G3DSA:3.40.50.620 5 340 5.1E-137 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M892_12200 3d890e04ad3c9655e64a2a3478efc906 345 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 341 3.8E-107 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 M892_12200 3d890e04ad3c9655e64a2a3478efc906 345 SUPERFAMILY SSF52374 5 341 6.68E-89 T 12-10-2018 M892_14465 4c92b3580411f29c577ca883de735c99 352 PIRSF PIRSF005096 4 352 2.9E-122 T 12-10-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 M892_14465 4c92b3580411f29c577ca883de735c99 352 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 176 185 - T 12-10-2018 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 M892_14465 4c92b3580411f29c577ca883de735c99 352 Gene3D G3DSA:2.70.98.10 11 351 2.3E-116 T 12-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 M892_14465 4c92b3580411f29c577ca883de735c99 352 Pfam PF01263 Aldose 1-epimerase 22 348 7.8E-92 T 12-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 M892_14465 4c92b3580411f29c577ca883de735c99 352 TIGRFAM TIGR02636 galM_Leloir: galactose mutarotase 17 350 8.9E-151 T 12-10-2018 IPR013458 Aldose 1-epimerase, bacterial GO:0004034|GO:0006012 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 M892_14465 4c92b3580411f29c577ca883de735c99 352 SUPERFAMILY SSF74650 7 350 1.78E-109 T 12-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 M892_23955 8791ae1e8bb4eeadc3a5c124c233b03f 117 Pfam PF05717 IS66 Orf2 like protein 9 103 1.1E-32 T 12-10-2018 IPR008878 Transposase IS66, Orf2 M892_06490 0f1dc1b3fb5c270b4595c424437b7b6b 85 Gene3D G3DSA:3.30.1340.10 1 85 8.4E-32 T 12-10-2018 IPR035895 HPr-like superfamily M892_06490 0f1dc1b3fb5c270b4595c424437b7b6b 85 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 12-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site M892_06490 0f1dc1b3fb5c270b4595c424437b7b6b 85 SUPERFAMILY SSF55594 1 82 1.96E-26 T 12-10-2018 IPR035895 HPr-like superfamily M892_06490 0f1dc1b3fb5c270b4595c424437b7b6b 85 Pfam PF00381 PTS HPr component phosphorylation site 3 82 9.7E-27 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like M892_06490 0f1dc1b3fb5c270b4595c424437b7b6b 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 3.6E-27 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like M892_06490 0f1dc1b3fb5c270b4595c424437b7b6b 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 12-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site M892_06490 0f1dc1b3fb5c270b4595c424437b7b6b 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 9.6E-18 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like M892_06490 0f1dc1b3fb5c270b4595c424437b7b6b 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 9.6E-18 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like M892_06490 0f1dc1b3fb5c270b4595c424437b7b6b 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 9.6E-18 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like M892_13600 41ac40302fc6bbfb7a3b32f57c8fa567 331 Pfam PF13557 Putative MetA-pathway of phenol degradation 181 323 4.0E-10 T 12-10-2018 IPR025737 MetA-pathway of phenol degradation, putative M892_13600 41ac40302fc6bbfb7a3b32f57c8fa567 331 SUPERFAMILY SSF56935 209 316 6.04E-5 T 12-10-2018 M892_09905 36641faf71239d222e077e752d96b7ec 348 Gene3D G3DSA:3.30.565.10 192 348 2.1E-44 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_09905 36641faf71239d222e077e752d96b7ec 348 SMART SM00388 129 194 3.0E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M892_09905 36641faf71239d222e077e752d96b7ec 348 SUPERFAMILY SSF55785 7 102 2.27E-8 T 12-10-2018 IPR035965 PAS domain superfamily M892_09905 36641faf71239d222e077e752d96b7ec 348 Pfam PF00989 PAS fold 7 111 4.1E-16 T 12-10-2018 IPR013767 PAS fold GO:0006355 M892_09905 36641faf71239d222e077e752d96b7ec 348 SMART SM00387 233 348 8.6E-31 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_09905 36641faf71239d222e077e752d96b7ec 348 Gene3D G3DSA:3.30.450.20 1 112 1.8E-28 T 12-10-2018 M892_09905 36641faf71239d222e077e752d96b7ec 348 SUPERFAMILY SSF47384 125 190 2.16E-12 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M892_09905 36641faf71239d222e077e752d96b7ec 348 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 234 347 1.0E-19 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_09905 36641faf71239d222e077e752d96b7ec 348 Gene3D G3DSA:1.10.287.130 114 191 1.3E-13 T 12-10-2018 M892_09905 36641faf71239d222e077e752d96b7ec 348 SMART SM00091 4 72 2.2E-6 T 12-10-2018 IPR000014 PAS domain M892_09905 36641faf71239d222e077e752d96b7ec 348 Pfam PF00512 His Kinase A (phospho-acceptor) domain 133 189 2.9E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M892_09905 36641faf71239d222e077e752d96b7ec 348 SUPERFAMILY SSF55874 198 347 1.02E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_09905 36641faf71239d222e077e752d96b7ec 348 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 8 121 9.8E-7 T 12-10-2018 IPR000014 PAS domain M892_09905 36641faf71239d222e077e752d96b7ec 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 282 296 1.7E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_09905 36641faf71239d222e077e752d96b7ec 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 334 347 1.7E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_09905 36641faf71239d222e077e752d96b7ec 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 311 329 1.7E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_23635 2eb1b05dc616648f5f812287867850ad 839 SUPERFAMILY SSF55124 505 644 3.76E-27 T 12-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 M892_23635 2eb1b05dc616648f5f812287867850ad 839 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 635 760 1.1E-18 T 12-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 M892_23635 2eb1b05dc616648f5f812287867850ad 839 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 15 294 4.5E-52 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 M892_23635 2eb1b05dc616648f5f812287867850ad 839 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 244 258 2.8E-9 T 12-10-2018 M892_23635 2eb1b05dc616648f5f812287867850ad 839 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 285 292 2.8E-9 T 12-10-2018 M892_23635 2eb1b05dc616648f5f812287867850ad 839 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 15 37 2.8E-9 T 12-10-2018 M892_23635 2eb1b05dc616648f5f812287867850ad 839 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 157 182 2.8E-9 T 12-10-2018 M892_23635 2eb1b05dc616648f5f812287867850ad 839 PIRSF PIRSF037149 9 838 0.0 T 12-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 M892_23635 2eb1b05dc616648f5f812287867850ad 839 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 563 624 1.9E-11 T 12-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 M892_23635 2eb1b05dc616648f5f812287867850ad 839 Gene3D G3DSA:1.10.10.1100 425 480 8.2E-12 T 12-10-2018 M892_23635 2eb1b05dc616648f5f812287867850ad 839 Gene3D G3DSA:3.30.413.10 634 795 1.3E-34 T 12-10-2018 M892_23635 2eb1b05dc616648f5f812287867850ad 839 PRINTS PR00397 Sirohaem Fe-binding site signature 639 657 8.7E-7 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 M892_23635 2eb1b05dc616648f5f812287867850ad 839 PRINTS PR00397 Sirohaem Fe-binding site signature 682 700 8.7E-7 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 M892_23635 2eb1b05dc616648f5f812287867850ad 839 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 682 698 - T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 M892_23635 2eb1b05dc616648f5f812287867850ad 839 Gene3D G3DSA:3.50.50.60 120 255 4.0E-85 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_23635 2eb1b05dc616648f5f812287867850ad 839 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 243 259 4.8E-17 T 12-10-2018 M892_23635 2eb1b05dc616648f5f812287867850ad 839 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 112 130 4.8E-17 T 12-10-2018 M892_23635 2eb1b05dc616648f5f812287867850ad 839 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 270 292 4.8E-17 T 12-10-2018 M892_23635 2eb1b05dc616648f5f812287867850ad 839 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 16 35 4.8E-17 T 12-10-2018 M892_23635 2eb1b05dc616648f5f812287867850ad 839 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 157 175 4.8E-17 T 12-10-2018 M892_23635 2eb1b05dc616648f5f812287867850ad 839 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 16 803 0.0 T 12-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 M892_23635 2eb1b05dc616648f5f812287867850ad 839 SUPERFAMILY SSF51905 14 199 4.38E-42 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_23635 2eb1b05dc616648f5f812287867850ad 839 Pfam PF04324 BFD-like [2Fe-2S] binding domain 426 474 3.0E-14 T 12-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain M892_23635 2eb1b05dc616648f5f812287867850ad 839 SUPERFAMILY SSF56014 636 810 1.31E-49 T 12-10-2018 M892_23635 2eb1b05dc616648f5f812287867850ad 839 Gene3D G3DSA:3.50.50.60 17 292 4.0E-85 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_23635 2eb1b05dc616648f5f812287867850ad 839 SUPERFAMILY SSF51905 159 317 1.65E-23 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_25385 7990c3a60b8b077c78cecf081b56e8dc 303 SUPERFAMILY SSF103481 41 141 6.54E-13 T 12-10-2018 M892_25385 7990c3a60b8b077c78cecf081b56e8dc 303 SUPERFAMILY SSF103481 189 290 8.76E-6 T 12-10-2018 M892_25385 7990c3a60b8b077c78cecf081b56e8dc 303 Pfam PF00892 EamA-like transporter family 152 286 5.3E-16 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M892_25385 7990c3a60b8b077c78cecf081b56e8dc 303 Pfam PF00892 EamA-like transporter family 8 139 4.4E-22 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M892_18380 12d215a6b15948d67e4634c10f4e51ec 337 Gene3D G3DSA:3.40.190.10 49 324 8.3E-72 T 12-10-2018 M892_18380 12d215a6b15948d67e4634c10f4e51ec 337 Gene3D G3DSA:3.40.190.10 130 230 8.3E-72 T 12-10-2018 M892_18380 12d215a6b15948d67e4634c10f4e51ec 337 SUPERFAMILY SSF53850 50 332 6.75E-50 T 12-10-2018 M892_18380 12d215a6b15948d67e4634c10f4e51ec 337 Pfam PF09084 NMT1/THI5 like 58 269 3.2E-70 T 12-10-2018 IPR015168 SsuA/THI5-like M892_14160 3f970b04d2b09ca4c595753189e237fa 679 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 8 120 6.3E-8 T 12-10-2018 IPR000014 PAS domain M892_14160 3f970b04d2b09ca4c595753189e237fa 679 Gene3D G3DSA:3.30.70.270 248 416 6.4E-50 T 12-10-2018 M892_14160 3f970b04d2b09ca4c595753189e237fa 679 SUPERFAMILY SSF55785 5 115 1.2E-9 T 12-10-2018 IPR035965 PAS domain superfamily M892_14160 3f970b04d2b09ca4c595753189e237fa 679 Pfam PF13188 PAS domain 133 177 5.6E-5 T 12-10-2018 IPR000014 PAS domain M892_14160 3f970b04d2b09ca4c595753189e237fa 679 Gene3D G3DSA:3.30.450.20 3 128 1.1E-11 T 12-10-2018 M892_14160 3f970b04d2b09ca4c595753189e237fa 679 SUPERFAMILY SSF55785 118 204 2.09E-8 T 12-10-2018 IPR035965 PAS domain superfamily M892_14160 3f970b04d2b09ca4c595753189e237fa 679 Gene3D G3DSA:3.30.450.20 129 239 1.9E-7 T 12-10-2018 M892_14160 3f970b04d2b09ca4c595753189e237fa 679 SMART SM00052 420 666 3.6E-104 T 12-10-2018 IPR001633 EAL domain M892_14160 3f970b04d2b09ca4c595753189e237fa 679 Pfam PF00990 Diguanylate cyclase, GGDEF domain 253 406 4.6E-43 T 12-10-2018 IPR000160 GGDEF domain M892_14160 3f970b04d2b09ca4c595753189e237fa 679 Gene3D G3DSA:3.20.20.450 421 676 2.4E-94 T 12-10-2018 IPR035919 EAL domain superfamily M892_14160 3f970b04d2b09ca4c595753189e237fa 679 SUPERFAMILY SSF55073 258 412 9.42E-46 T 12-10-2018 IPR029787 Nucleotide cyclase M892_14160 3f970b04d2b09ca4c595753189e237fa 679 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 252 407 1.9E-37 T 12-10-2018 IPR000160 GGDEF domain M892_14160 3f970b04d2b09ca4c595753189e237fa 679 SMART SM00267 242 410 5.9E-55 T 12-10-2018 IPR000160 GGDEF domain M892_14160 3f970b04d2b09ca4c595753189e237fa 679 SMART SM00091 131 198 0.011 T 12-10-2018 IPR000014 PAS domain M892_14160 3f970b04d2b09ca4c595753189e237fa 679 SMART SM00091 8 74 0.0078 T 12-10-2018 IPR000014 PAS domain M892_14160 3f970b04d2b09ca4c595753189e237fa 679 SUPERFAMILY SSF141868 427 674 4.18E-84 T 12-10-2018 IPR035919 EAL domain superfamily M892_14160 3f970b04d2b09ca4c595753189e237fa 679 Pfam PF08448 PAS fold 15 119 3.6E-7 T 12-10-2018 IPR013656 PAS fold-4 M892_14160 3f970b04d2b09ca4c595753189e237fa 679 Pfam PF00563 EAL domain 427 661 2.8E-72 T 12-10-2018 IPR001633 EAL domain M892_13965 c52aed3ecd3ff97b76b9d1ec411fb68a 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 122 305 1.3E-19 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M892_13965 c52aed3ecd3ff97b76b9d1ec411fb68a 341 Gene3D G3DSA:1.10.3720.10 94 303 4.7E-15 T 12-10-2018 IPR035906 MetI-like superfamily M892_13965 c52aed3ecd3ff97b76b9d1ec411fb68a 341 SUPERFAMILY SSF161098 96 288 3.27E-19 T 12-10-2018 IPR035906 MetI-like superfamily M892_23160 194ac35fb23357a1de284f45afedf70b 386 SUPERFAMILY SSF103473 18 374 6.41E-35 T 12-10-2018 IPR036259 MFS transporter superfamily M892_23160 194ac35fb23357a1de284f45afedf70b 386 Pfam PF07690 Major Facilitator Superfamily 19 343 9.6E-24 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 M892_23160 194ac35fb23357a1de284f45afedf70b 386 Gene3D G3DSA:1.20.1250.20 13 194 6.4E-17 T 12-10-2018 M892_23160 194ac35fb23357a1de284f45afedf70b 386 Gene3D G3DSA:1.20.1250.20 201 383 4.9E-9 T 12-10-2018 M892_19605 82ec87a5f23e29d128ef9d422c471aaf 385 Gene3D G3DSA:1.10.287.470 106 180 8.9E-48 T 12-10-2018 M892_19605 82ec87a5f23e29d128ef9d422c471aaf 385 SUPERFAMILY SSF111369 61 239 2.22E-21 T 12-10-2018 M892_19605 82ec87a5f23e29d128ef9d422c471aaf 385 Pfam PF13533 Biotin-lipoyl like 71 120 5.4E-8 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain M892_19605 82ec87a5f23e29d128ef9d422c471aaf 385 Gene3D G3DSA:2.40.30.170 60 306 8.9E-48 T 12-10-2018 M892_19605 82ec87a5f23e29d128ef9d422c471aaf 385 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 59 373 2.3E-36 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 M892_19605 82ec87a5f23e29d128ef9d422c471aaf 385 Gene3D G3DSA:2.40.50.100 69 214 8.9E-48 T 12-10-2018 M892_19605 82ec87a5f23e29d128ef9d422c471aaf 385 Pfam PF13437 HlyD family secretion protein 184 293 1.6E-8 T 12-10-2018 M892_19605 82ec87a5f23e29d128ef9d422c471aaf 385 Gene3D G3DSA:2.40.420.20 307 371 8.9E-48 T 12-10-2018 M892_01835 711a8317c5789200d18b7a6db23b7ef3 576 Gene3D G3DSA:3.30.565.10 280 442 1.2E-42 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_01835 711a8317c5789200d18b7a6db23b7ef3 576 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 327 435 2.8E-27 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_01835 711a8317c5789200d18b7a6db23b7ef3 576 Gene3D G3DSA:1.10.287.130 180 277 7.2E-27 T 12-10-2018 M892_01835 711a8317c5789200d18b7a6db23b7ef3 576 SUPERFAMILY SSF55874 268 440 4.45E-43 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_01835 711a8317c5789200d18b7a6db23b7ef3 576 Pfam PF00512 His Kinase A (phospho-acceptor) domain 215 278 4.3E-18 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M892_01835 711a8317c5789200d18b7a6db23b7ef3 576 Gene3D G3DSA:3.40.50.12740 456 576 5.4E-39 T 12-10-2018 M892_01835 711a8317c5789200d18b7a6db23b7ef3 576 SMART SM00388 214 279 3.6E-19 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M892_01835 711a8317c5789200d18b7a6db23b7ef3 576 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 434 5.2E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_01835 711a8317c5789200d18b7a6db23b7ef3 576 PRINTS PR00344 Bacterial sensor protein C-terminal signature 362 376 5.2E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_01835 711a8317c5789200d18b7a6db23b7ef3 576 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 390 5.2E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_01835 711a8317c5789200d18b7a6db23b7ef3 576 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 415 5.2E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_01835 711a8317c5789200d18b7a6db23b7ef3 576 SUPERFAMILY SSF52172 457 574 1.39E-36 T 12-10-2018 IPR011006 CheY-like superfamily M892_01835 711a8317c5789200d18b7a6db23b7ef3 576 SUPERFAMILY SSF47384 200 278 2.75E-20 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M892_01835 711a8317c5789200d18b7a6db23b7ef3 576 SMART SM00387 326 437 1.3E-30 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_01835 711a8317c5789200d18b7a6db23b7ef3 576 SMART SM00448 456 569 1.2E-36 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_01835 711a8317c5789200d18b7a6db23b7ef3 576 Pfam PF00072 Response regulator receiver domain 459 570 2.2E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_01310 b07ba6376104a5cd7838894b6c7075f5 587 Pfam PF00158 Sigma-54 interaction domain 285 445 1.8E-61 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 M892_01310 b07ba6376104a5cd7838894b6c7075f5 587 Gene3D G3DSA:1.10.10.60 547 583 1.0E-8 T 12-10-2018 M892_01310 b07ba6376104a5cd7838894b6c7075f5 587 Gene3D G3DSA:3.30.450.40 3 188 9.2E-46 T 12-10-2018 IPR029016 GAF-like domain superfamily M892_01310 b07ba6376104a5cd7838894b6c7075f5 587 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 367 382 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 M892_01310 b07ba6376104a5cd7838894b6c7075f5 587 Pfam PF01590 GAF domain 91 186 7.4E-9 T 12-10-2018 IPR003018 GAF domain GO:0005515 M892_01310 b07ba6376104a5cd7838894b6c7075f5 587 SMART SM00382 300 444 1.2E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_01310 b07ba6376104a5cd7838894b6c7075f5 587 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 549 566 9.7E-6 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M892_01310 b07ba6376104a5cd7838894b6c7075f5 587 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 566 586 9.7E-6 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M892_01310 b07ba6376104a5cd7838894b6c7075f5 587 SUPERFAMILY SSF52540 284 511 1.68E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_01310 b07ba6376104a5cd7838894b6c7075f5 587 SUPERFAMILY SSF46689 489 585 8.06E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_01310 b07ba6376104a5cd7838894b6c7075f5 587 Pfam PF02954 Bacterial regulatory protein, Fis family 556 581 7.3E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M892_01310 b07ba6376104a5cd7838894b6c7075f5 587 Gene3D G3DSA:1.10.8.60 458 529 6.8E-9 T 12-10-2018 M892_01310 b07ba6376104a5cd7838894b6c7075f5 587 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 304 317 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 M892_01310 b07ba6376104a5cd7838894b6c7075f5 587 Gene3D G3DSA:3.40.50.300 266 452 2.7E-57 T 12-10-2018 M892_25740 152235ca4614764f7bff951140a05f7d 248 Gene3D G3DSA:2.30.110.10 24 137 1.0E-40 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 M892_25740 152235ca4614764f7bff951140a05f7d 248 SUPERFAMILY SSF141371 26 138 2.67E-32 T 12-10-2018 M892_25740 152235ca4614764f7bff951140a05f7d 248 SUPERFAMILY SSF141371 139 247 2.16E-32 T 12-10-2018 M892_25740 152235ca4614764f7bff951140a05f7d 248 Pfam PF12945 Flagellar protein YcgR 39 128 7.3E-14 T 12-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal M892_25740 152235ca4614764f7bff951140a05f7d 248 Gene3D G3DSA:2.40.10.220 138 248 7.5E-38 T 12-10-2018 M892_25740 152235ca4614764f7bff951140a05f7d 248 Pfam PF07238 PilZ domain 135 235 1.4E-13 T 12-10-2018 IPR009875 PilZ domain GO:0035438 M892_15900 1057c74c55b8e67e8f3387306870bcb1 449 Gene3D G3DSA:1.20.120.160 328 441 7.2E-22 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 M892_15900 1057c74c55b8e67e8f3387306870bcb1 449 SUPERFAMILY SSF47226 328 442 5.89E-22 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 M892_15900 1057c74c55b8e67e8f3387306870bcb1 449 Pfam PF01627 Hpt domain 351 429 4.9E-13 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 M892_11340 885e2ec55e85c31c42b9964a1d2a762f 808 Pfam PF01553 Acyltransferase 289 424 1.4E-23 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 M892_11340 885e2ec55e85c31c42b9964a1d2a762f 808 PIRSF PIRSF000437 19 808 0.0 T 12-10-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 M892_11340 885e2ec55e85c31c42b9964a1d2a762f 808 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 13 807 31.498 T 12-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 M892_11340 885e2ec55e85c31c42b9964a1d2a762f 808 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 11 799 0.0 T 12-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 M892_11340 885e2ec55e85c31c42b9964a1d2a762f 808 SUPERFAMILY SSF69593 240 488 1.09E-24 T 12-10-2018 M892_11340 885e2ec55e85c31c42b9964a1d2a762f 808 PIRSF PIRSF500064 2 808 0.0 T 12-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 M892_11340 885e2ec55e85c31c42b9964a1d2a762f 808 SMART SM00563 300 427 5.7E-28 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 M892_19170 c6175a21a002e7502885fdfee34ee457 388 SMART SM00936 278 368 3.2E-28 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 M892_19170 c6175a21a002e7502885fdfee34ee457 388 Gene3D G3DSA:2.60.410.10 278 368 9.8E-27 T 12-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 M892_19170 c6175a21a002e7502885fdfee34ee457 388 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 61 72 3.3E-17 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 M892_19170 c6175a21a002e7502885fdfee34ee457 388 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 117 134 3.3E-17 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 M892_19170 c6175a21a002e7502885fdfee34ee457 388 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 144 157 3.3E-17 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 M892_19170 c6175a21a002e7502885fdfee34ee457 388 Gene3D G3DSA:3.40.710.10 15 276 9.9E-90 T 12-10-2018 M892_19170 c6175a21a002e7502885fdfee34ee457 388 SUPERFAMILY SSF69189 278 370 4.71E-23 T 12-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 M892_19170 c6175a21a002e7502885fdfee34ee457 388 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 27 257 2.1E-85 T 12-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 M892_19170 c6175a21a002e7502885fdfee34ee457 388 SUPERFAMILY SSF56601 6 278 4.07E-83 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like M892_19170 c6175a21a002e7502885fdfee34ee457 388 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 278 368 1.1E-20 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 M892_18955 f46464ac7ec56bcc6b1bbab8f80b99e1 459 Gene3D G3DSA:3.90.350.10 66 347 7.0E-80 T 12-10-2018 IPR014736 Transposase, Tn5-like, core M892_18955 f46464ac7ec56bcc6b1bbab8f80b99e1 459 SUPERFAMILY SSF53098 1 458 4.63E-131 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_18955 f46464ac7ec56bcc6b1bbab8f80b99e1 459 Gene3D G3DSA:1.10.740.10 348 458 2.0E-41 T 12-10-2018 IPR014737 Transposase, Tn5-like, C-terminal M892_18955 f46464ac7ec56bcc6b1bbab8f80b99e1 459 Gene3D G3DSA:1.10.246.40 1 65 9.7E-25 T 12-10-2018 IPR038215 Transposase, Tn5-like, N-terminal domain superfamily M892_18955 f46464ac7ec56bcc6b1bbab8f80b99e1 459 Pfam PF02281 Transposase Tn5 dimerisation domain 369 454 1.6E-17 T 12-10-2018 IPR003201 Transposase Tn5, dimerisation M892_18955 f46464ac7ec56bcc6b1bbab8f80b99e1 459 Pfam PF01609 Transposase DDE domain 222 357 3.8E-5 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_18955 f46464ac7ec56bcc6b1bbab8f80b99e1 459 Pfam PF14706 Transposase DNA-binding 9 65 5.0E-17 T 12-10-2018 IPR014735 Transposase, Tn5-like, N-terminal M892_00225 9c0483af1af55620b5e52214921b2e8f 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 377 391 7.3E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_00225 9c0483af1af55620b5e52214921b2e8f 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 426 7.3E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_00225 9c0483af1af55620b5e52214921b2e8f 449 SMART SM00387 342 448 3.6E-15 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_00225 9c0483af1af55620b5e52214921b2e8f 449 SUPERFAMILY SSF55874 308 444 1.02E-24 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_00225 9c0483af1af55620b5e52214921b2e8f 449 Gene3D G3DSA:1.10.287.130 193 299 3.3E-7 T 12-10-2018 M892_00225 9c0483af1af55620b5e52214921b2e8f 449 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 346 446 1.4E-11 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_00225 9c0483af1af55620b5e52214921b2e8f 449 Gene3D G3DSA:3.30.565.10 309 448 5.5E-26 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_00225 9c0483af1af55620b5e52214921b2e8f 449 SUPERFAMILY SSF47384 224 287 9.42E-5 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M892_00995 ac04b40e062c7051eb4a469a381604fe 159 Pfam PF00583 Acetyltransferase (GNAT) family 50 140 2.5E-11 T 12-10-2018 IPR000182 GNAT domain M892_00995 ac04b40e062c7051eb4a469a381604fe 159 Gene3D G3DSA:3.40.630.30 15 155 2.9E-17 T 12-10-2018 M892_00995 ac04b40e062c7051eb4a469a381604fe 159 SUPERFAMILY SSF55729 22 158 6.86E-20 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_09400 23658d312ed458e5e9d5ad458409e905 374 Gene3D G3DSA:3.40.50.2000 190 359 9.5E-155 T 12-10-2018 M892_09400 23658d312ed458e5e9d5ad458409e905 374 SUPERFAMILY SSF53756 3 373 2.08E-138 T 12-10-2018 M892_09400 23658d312ed458e5e9d5ad458409e905 374 Gene3D G3DSA:3.40.50.2000 5 371 9.5E-155 T 12-10-2018 M892_09400 23658d312ed458e5e9d5ad458409e905 374 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 25 372 1.3E-125 T 12-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 M892_09400 23658d312ed458e5e9d5ad458409e905 374 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 5 372 3.1E-162 T 12-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 M892_08195 c502acb3bd66e470ee529dce778d0afd 219 Pfam PF03358 NADPH-dependent FMN reductase 1 150 5.5E-24 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 M892_08195 c502acb3bd66e470ee529dce778d0afd 219 Gene3D G3DSA:3.40.50.360 1 199 7.7E-37 T 12-10-2018 IPR029039 Flavoprotein-like superfamily M892_08195 c502acb3bd66e470ee529dce778d0afd 219 SUPERFAMILY SSF52218 1 183 6.61E-34 T 12-10-2018 IPR029039 Flavoprotein-like superfamily M892_01155 f7550702e94ba0c330a906c908b65b35 181 Pfam PF00583 Acetyltransferase (GNAT) family 60 146 7.0E-15 T 12-10-2018 IPR000182 GNAT domain M892_01155 f7550702e94ba0c330a906c908b65b35 181 SUPERFAMILY SSF55729 24 178 7.5E-18 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_01155 f7550702e94ba0c330a906c908b65b35 181 TIGRFAM TIGR02406 ectoine_EctA: diaminobutyrate acetyltransferase 27 180 1.2E-61 T 12-10-2018 IPR012772 L-2,4-diaminobutyric acid acetyltransferase GO:0019491|GO:0033816 KEGG: 00260+2.3.1.178 M892_01155 f7550702e94ba0c330a906c908b65b35 181 PIRSF PIRSF037663 26 174 2.6E-12 T 12-10-2018 IPR017255 Acetyltransferase, GNAT, predicted M892_01155 f7550702e94ba0c330a906c908b65b35 181 Gene3D G3DSA:3.40.630.30 24 181 6.4E-40 T 12-10-2018 M892_17835 6d4009b74946a1ed9fd8040902e87f5d 74 Pfam PF13384 Homeodomain-like domain 28 67 1.9E-9 T 12-10-2018 M892_17835 6d4009b74946a1ed9fd8040902e87f5d 74 SUPERFAMILY SSF46689 16 68 6.57E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_06595 b40024b5ca9d150f5fcb3ab0de41e02d 275 SMART SM00138 8 272 8.9E-133 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 M892_06595 b40024b5ca9d150f5fcb3ab0de41e02d 275 PRINTS PR00996 Glutamate methyltransferase family signature 30 43 3.5E-43 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 M892_06595 b40024b5ca9d150f5fcb3ab0de41e02d 275 PRINTS PR00996 Glutamate methyltransferase family signature 212 226 3.5E-43 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 M892_06595 b40024b5ca9d150f5fcb3ab0de41e02d 275 PRINTS PR00996 Glutamate methyltransferase family signature 143 159 3.5E-43 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 M892_06595 b40024b5ca9d150f5fcb3ab0de41e02d 275 PRINTS PR00996 Glutamate methyltransferase family signature 106 126 3.5E-43 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 M892_06595 b40024b5ca9d150f5fcb3ab0de41e02d 275 PRINTS PR00996 Glutamate methyltransferase family signature 231 254 3.5E-43 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 M892_06595 b40024b5ca9d150f5fcb3ab0de41e02d 275 PRINTS PR00996 Glutamate methyltransferase family signature 69 81 3.5E-43 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 M892_06595 b40024b5ca9d150f5fcb3ab0de41e02d 275 Gene3D G3DSA:3.40.50.150 75 274 1.8E-60 T 12-10-2018 M892_06595 b40024b5ca9d150f5fcb3ab0de41e02d 275 SUPERFAMILY SSF47757 3 75 1.27E-14 T 12-10-2018 M892_06595 b40024b5ca9d150f5fcb3ab0de41e02d 275 SUPERFAMILY SSF53335 76 269 2.39E-50 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M892_06595 b40024b5ca9d150f5fcb3ab0de41e02d 275 Pfam PF01739 CheR methyltransferase, SAM binding domain 76 269 1.9E-68 T 12-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal M892_06595 b40024b5ca9d150f5fcb3ab0de41e02d 275 Gene3D G3DSA:1.10.155.10 1 74 8.1E-11 T 12-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily M892_06595 b40024b5ca9d150f5fcb3ab0de41e02d 275 Pfam PF03705 CheR methyltransferase, all-alpha domain 9 57 6.2E-10 T 12-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal M892_08265 b1deb4e155104617154212191ad955e9 489 SUPERFAMILY SSF46548 2 155 1.83E-36 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 M892_08265 b1deb4e155104617154212191ad955e9 489 Gene3D G3DSA:1.10.1060.10 9 143 4.1E-24 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 M892_08265 b1deb4e155104617154212191ad955e9 489 Gene3D G3DSA:3.50.50.60 251 406 8.7E-38 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_08265 b1deb4e155104617154212191ad955e9 489 SUPERFAMILY SSF51971 143 407 5.89E-66 T 12-10-2018 M892_08265 b1deb4e155104617154212191ad955e9 489 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 38 131 2.9E-24 T 12-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 M892_08265 b1deb4e155104617154212191ad955e9 489 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 146 459 2.2E-25 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 M892_08265 b1deb4e155104617154212191ad955e9 489 Gene3D G3DSA:3.40.50.720 144 250 6.1E-14 T 12-10-2018 M892_08265 b1deb4e155104617154212191ad955e9 489 PRINTS PR00419 Adrenodoxin reductase family signature 146 168 3.8E-23 T 12-10-2018 M892_08265 b1deb4e155104617154212191ad955e9 489 PRINTS PR00419 Adrenodoxin reductase family signature 169 182 3.8E-23 T 12-10-2018 M892_08265 b1deb4e155104617154212191ad955e9 489 PRINTS PR00419 Adrenodoxin reductase family signature 211 221 3.8E-23 T 12-10-2018 M892_08265 b1deb4e155104617154212191ad955e9 489 PRINTS PR00419 Adrenodoxin reductase family signature 286 300 3.8E-23 T 12-10-2018 M892_08265 b1deb4e155104617154212191ad955e9 489 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 478 4.8E-198 T 12-10-2018 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 M892_13235 02a71b680c2f9be63c1f89668a6c8d5d 346 SMART SM00382 122 247 0.0068 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_13235 02a71b680c2f9be63c1f89668a6c8d5d 346 Pfam PF00437 Type II/IV secretion system protein 12 270 6.9E-47 T 12-10-2018 IPR001482 Type II/IV secretion system protein M892_13235 02a71b680c2f9be63c1f89668a6c8d5d 346 SUPERFAMILY SSF52540 5 336 1.48E-74 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_13235 02a71b680c2f9be63c1f89668a6c8d5d 346 Gene3D G3DSA:3.30.450.90 1 100 1.3E-36 T 12-10-2018 M892_13235 02a71b680c2f9be63c1f89668a6c8d5d 346 Gene3D G3DSA:3.40.50.300 101 345 1.5E-102 T 12-10-2018 M892_13235 02a71b680c2f9be63c1f89668a6c8d5d 346 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 12-10-2018 IPR001482 Type II/IV secretion system protein M892_13235 02a71b680c2f9be63c1f89668a6c8d5d 346 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 334 1.4E-152 T 12-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 M892_05520 0385095b34926ec2cdb9cd460b819b76 116 Pfam PF01230 HIT domain 12 109 1.2E-29 T 12-10-2018 IPR001310 Histidine triad (HIT) protein M892_05520 0385095b34926ec2cdb9cd460b819b76 116 Gene3D G3DSA:3.30.428.10 1 111 9.3E-36 T 12-10-2018 IPR036265 HIT-like superfamily M892_05520 0385095b34926ec2cdb9cd460b819b76 116 SUPERFAMILY SSF54197 2 112 3.54E-35 T 12-10-2018 IPR036265 HIT-like superfamily M892_05520 0385095b34926ec2cdb9cd460b819b76 116 PRINTS PR00332 Histidine triad family signature 27 45 2.9E-19 T 12-10-2018 IPR001310 Histidine triad (HIT) protein M892_05520 0385095b34926ec2cdb9cd460b819b76 116 PRINTS PR00332 Histidine triad family signature 95 105 2.9E-19 T 12-10-2018 IPR001310 Histidine triad (HIT) protein M892_05520 0385095b34926ec2cdb9cd460b819b76 116 PRINTS PR00332 Histidine triad family signature 6 22 2.9E-19 T 12-10-2018 IPR001310 Histidine triad (HIT) protein M892_05520 0385095b34926ec2cdb9cd460b819b76 116 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 12-10-2018 IPR019808 Histidine triad, conserved site M892_24300 15e6e35ae92f9c87d5d8be6998ce7a35 292 Gene3D G3DSA:3.40.190.290 93 282 9.0E-35 T 12-10-2018 M892_24300 15e6e35ae92f9c87d5d8be6998ce7a35 292 Pfam PF03466 LysR substrate binding domain 110 287 1.2E-14 T 12-10-2018 IPR005119 LysR, substrate-binding M892_24300 15e6e35ae92f9c87d5d8be6998ce7a35 292 Gene3D G3DSA:1.10.10.10 1 88 8.8E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_24300 15e6e35ae92f9c87d5d8be6998ce7a35 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 2.4E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_24300 15e6e35ae92f9c87d5d8be6998ce7a35 292 SUPERFAMILY SSF53850 92 289 1.99E-21 T 12-10-2018 M892_24300 15e6e35ae92f9c87d5d8be6998ce7a35 292 SUPERFAMILY SSF46785 1 87 3.63E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_14015 b2011a0a7281109329e08de82e223719 1044 Gene3D G3DSA:3.30.70.1440 658 858 1.3E-258 T 12-10-2018 M892_14015 b2011a0a7281109329e08de82e223719 1044 Gene3D G3DSA:3.30.70.1430 41 807 1.3E-258 T 12-10-2018 M892_14015 b2011a0a7281109329e08de82e223719 1044 SUPERFAMILY SSF82714 184 263 2.62E-11 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M892_14015 b2011a0a7281109329e08de82e223719 1044 SUPERFAMILY SSF82866 289 490 1.24E-41 T 12-10-2018 M892_14015 b2011a0a7281109329e08de82e223719 1044 Gene3D G3DSA:3.30.2090.10 179 270 1.3E-258 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M892_14015 b2011a0a7281109329e08de82e223719 1044 Gene3D G3DSA:1.20.1640.10 512 1024 1.3E-258 T 12-10-2018 M892_14015 b2011a0a7281109329e08de82e223719 1044 Gene3D G3DSA:1.20.1640.10 13 511 1.3E-258 T 12-10-2018 M892_14015 b2011a0a7281109329e08de82e223719 1044 SUPERFAMILY SSF82714 712 794 6.67E-5 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M892_14015 b2011a0a7281109329e08de82e223719 1044 Gene3D G3DSA:3.30.70.1320 135 325 1.3E-258 T 12-10-2018 M892_14015 b2011a0a7281109329e08de82e223719 1044 Pfam PF00873 AcrB/AcrD/AcrF family 6 1027 5.1E-174 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_14015 b2011a0a7281109329e08de82e223719 1044 SUPERFAMILY SSF82693 141 325 1.46E-13 T 12-10-2018 M892_14015 b2011a0a7281109329e08de82e223719 1044 SUPERFAMILY SSF82693 41 133 3.4E-22 T 12-10-2018 M892_14015 b2011a0a7281109329e08de82e223719 1044 Gene3D G3DSA:3.30.2090.10 711 799 1.3E-258 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M892_14015 b2011a0a7281109329e08de82e223719 1044 SUPERFAMILY SSF82866 794 1029 7.06E-47 T 12-10-2018 M892_14015 b2011a0a7281109329e08de82e223719 1044 Gene3D G3DSA:3.30.70.1430 567 657 1.3E-258 T 12-10-2018 M892_14015 b2011a0a7281109329e08de82e223719 1044 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 5.0E-28 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_14015 b2011a0a7281109329e08de82e223719 1044 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 5.0E-28 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_14015 b2011a0a7281109329e08de82e223719 1044 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 5.0E-28 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_14015 b2011a0a7281109329e08de82e223719 1044 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 5.0E-28 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_14015 b2011a0a7281109329e08de82e223719 1044 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 5.0E-28 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_14015 b2011a0a7281109329e08de82e223719 1044 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 5.0E-28 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_12655 3c15ddb81f6809b95b1f562e30d8e088 450 Gene3D G3DSA:3.40.1160.10 6 290 5.0E-98 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily M892_12655 3c15ddb81f6809b95b1f562e30d8e088 450 SUPERFAMILY SSF55021 297 394 1.41E-20 T 12-10-2018 M892_12655 3c15ddb81f6809b95b1f562e30d8e088 450 SUPERFAMILY SSF55021 377 449 2.16E-15 T 12-10-2018 M892_12655 3c15ddb81f6809b95b1f562e30d8e088 450 SUPERFAMILY SSF53633 6 293 5.11E-76 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily M892_12655 3c15ddb81f6809b95b1f562e30d8e088 450 Pfam PF00696 Amino acid kinase family 6 278 5.3E-48 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 M892_12655 3c15ddb81f6809b95b1f562e30d8e088 450 Gene3D G3DSA:3.30.70.260 310 383 8.3E-48 T 12-10-2018 M892_12655 3c15ddb81f6809b95b1f562e30d8e088 450 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 6 449 1.8E-122 T 12-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 M892_12655 3c15ddb81f6809b95b1f562e30d8e088 450 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 6 449 1.4E-123 T 12-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 M892_12655 3c15ddb81f6809b95b1f562e30d8e088 450 PIRSF PIRSF000726 2 450 5.6E-129 T 12-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 M892_12655 3c15ddb81f6809b95b1f562e30d8e088 450 Gene3D G3DSA:1.20.120.1320 42 135 5.0E-98 T 12-10-2018 M892_12655 3c15ddb81f6809b95b1f562e30d8e088 450 Gene3D G3DSA:3.30.70.260 304 447 8.3E-48 T 12-10-2018 M892_12655 3c15ddb81f6809b95b1f562e30d8e088 450 ProSitePatterns PS00324 Aspartokinase signature. 6 14 - T 12-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 M892_10700 5c1c93fbee031bab28d3407673f7b50d 277 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 136 275 1.1E-25 T 12-10-2018 IPR000160 GGDEF domain M892_10700 5c1c93fbee031bab28d3407673f7b50d 277 Gene3D G3DSA:3.30.70.270 132 277 3.5E-36 T 12-10-2018 M892_10700 5c1c93fbee031bab28d3407673f7b50d 277 Gene3D G3DSA:3.30.450.20 6 131 9.9E-10 T 12-10-2018 M892_10700 5c1c93fbee031bab28d3407673f7b50d 277 Pfam PF00990 Diguanylate cyclase, GGDEF domain 136 275 1.6E-25 T 12-10-2018 IPR000160 GGDEF domain M892_10700 5c1c93fbee031bab28d3407673f7b50d 277 SMART SM00267 124 276 2.4E-26 T 12-10-2018 IPR000160 GGDEF domain M892_10700 5c1c93fbee031bab28d3407673f7b50d 277 SUPERFAMILY SSF55073 140 275 7.38E-30 T 12-10-2018 IPR029787 Nucleotide cyclase M892_04575 9c9b786c917e781c8c845ff4b191288d 336 Pfam PF00665 Integrase core domain 128 244 1.3E-19 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 M892_04575 9c9b786c917e781c8c845ff4b191288d 336 Gene3D G3DSA:3.30.420.10 125 295 3.9E-11 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M892_04575 9c9b786c917e781c8c845ff4b191288d 336 SUPERFAMILY SSF53098 128 298 2.15E-37 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_17795 9c9b786c917e781c8c845ff4b191288d 336 Pfam PF00665 Integrase core domain 128 244 1.3E-19 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 M892_17795 9c9b786c917e781c8c845ff4b191288d 336 Gene3D G3DSA:3.30.420.10 125 295 3.9E-11 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M892_17795 9c9b786c917e781c8c845ff4b191288d 336 SUPERFAMILY SSF53098 128 298 2.15E-37 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_22925 9c9b786c917e781c8c845ff4b191288d 336 Pfam PF00665 Integrase core domain 128 244 1.3E-19 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 M892_22925 9c9b786c917e781c8c845ff4b191288d 336 Gene3D G3DSA:3.30.420.10 125 295 3.9E-11 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M892_22925 9c9b786c917e781c8c845ff4b191288d 336 SUPERFAMILY SSF53098 128 298 2.15E-37 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_22885 9c9b786c917e781c8c845ff4b191288d 336 Pfam PF00665 Integrase core domain 128 244 1.3E-19 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 M892_22885 9c9b786c917e781c8c845ff4b191288d 336 Gene3D G3DSA:3.30.420.10 125 295 3.9E-11 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M892_22885 9c9b786c917e781c8c845ff4b191288d 336 SUPERFAMILY SSF53098 128 298 2.15E-37 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_24860 9c9b786c917e781c8c845ff4b191288d 336 Pfam PF00665 Integrase core domain 128 244 1.3E-19 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 M892_24860 9c9b786c917e781c8c845ff4b191288d 336 Gene3D G3DSA:3.30.420.10 125 295 3.9E-11 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M892_24860 9c9b786c917e781c8c845ff4b191288d 336 SUPERFAMILY SSF53098 128 298 2.15E-37 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_03055 9c9b786c917e781c8c845ff4b191288d 336 Pfam PF00665 Integrase core domain 128 244 1.3E-19 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 M892_03055 9c9b786c917e781c8c845ff4b191288d 336 Gene3D G3DSA:3.30.420.10 125 295 3.9E-11 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M892_03055 9c9b786c917e781c8c845ff4b191288d 336 SUPERFAMILY SSF53098 128 298 2.15E-37 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_21715 9c9b786c917e781c8c845ff4b191288d 336 Pfam PF00665 Integrase core domain 128 244 1.3E-19 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 M892_21715 9c9b786c917e781c8c845ff4b191288d 336 Gene3D G3DSA:3.30.420.10 125 295 3.9E-11 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M892_21715 9c9b786c917e781c8c845ff4b191288d 336 SUPERFAMILY SSF53098 128 298 2.15E-37 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_16540 9c9b786c917e781c8c845ff4b191288d 336 Pfam PF00665 Integrase core domain 128 244 1.3E-19 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 M892_16540 9c9b786c917e781c8c845ff4b191288d 336 Gene3D G3DSA:3.30.420.10 125 295 3.9E-11 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M892_16540 9c9b786c917e781c8c845ff4b191288d 336 SUPERFAMILY SSF53098 128 298 2.15E-37 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_26450 9c9b786c917e781c8c845ff4b191288d 336 Pfam PF00665 Integrase core domain 128 244 1.3E-19 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 M892_26450 9c9b786c917e781c8c845ff4b191288d 336 Gene3D G3DSA:3.30.420.10 125 295 3.9E-11 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M892_26450 9c9b786c917e781c8c845ff4b191288d 336 SUPERFAMILY SSF53098 128 298 2.15E-37 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_03465 929a6388be8d0db0a1390d25d3d4e2f2 221 Gene3D G3DSA:2.10.109.10 87 217 2.1E-49 T 12-10-2018 M892_03465 929a6388be8d0db0a1390d25d3d4e2f2 221 SUPERFAMILY SSF47413 2 60 3.18E-12 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 M892_03465 929a6388be8d0db0a1390d25d3d4e2f2 221 Pfam PF00717 Peptidase S24-like 133 206 2.3E-14 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C M892_03465 929a6388be8d0db0a1390d25d3d4e2f2 221 SMART SM00530 8 63 1.1E-9 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 M892_03465 929a6388be8d0db0a1390d25d3d4e2f2 221 Gene3D G3DSA:1.10.260.40 5 63 4.3E-12 T 12-10-2018 M892_03465 929a6388be8d0db0a1390d25d3d4e2f2 221 Pfam PF01381 Helix-turn-helix 10 57 1.1E-11 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 M892_03465 929a6388be8d0db0a1390d25d3d4e2f2 221 SUPERFAMILY SSF51306 91 215 4.88E-26 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily M892_16765 97f0730a0b09ec9620d97df8d703b76a 230 SMART SM00382 35 222 6.1E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_16765 97f0730a0b09ec9620d97df8d703b76a 230 Pfam PF00005 ABC transporter 26 174 4.2E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_16765 97f0730a0b09ec9620d97df8d703b76a 230 SUPERFAMILY SSF52540 6 226 1.5E-75 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_16765 97f0730a0b09ec9620d97df8d703b76a 230 Gene3D G3DSA:3.40.50.300 4 230 3.5E-72 T 12-10-2018 M892_16765 97f0730a0b09ec9620d97df8d703b76a 230 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_07355 8e7255834359e7c9eb3a36b6e37b24f1 862 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 302 308 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 M892_07355 8e7255834359e7c9eb3a36b6e37b24f1 862 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 213 227 2.9E-19 T 12-10-2018 M892_07355 8e7255834359e7c9eb3a36b6e37b24f1 862 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 333 357 2.9E-19 T 12-10-2018 M892_07355 8e7255834359e7c9eb3a36b6e37b24f1 862 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 185 201 2.9E-19 T 12-10-2018 M892_07355 8e7255834359e7c9eb3a36b6e37b24f1 862 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 299 311 2.9E-19 T 12-10-2018 M892_07355 8e7255834359e7c9eb3a36b6e37b24f1 862 SUPERFAMILY SSF53335 4 525 4.85E-123 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M892_07355 8e7255834359e7c9eb3a36b6e37b24f1 862 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 4 486 6.8E-103 T 12-10-2018 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 M892_07355 8e7255834359e7c9eb3a36b6e37b24f1 862 Gene3D G3DSA:3.40.50.150 183 474 1.3E-84 T 12-10-2018 M892_07355 8e7255834359e7c9eb3a36b6e37b24f1 862 Gene3D G3DSA:1.20.1260.30 1 179 5.1E-52 T 12-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily M892_07355 8e7255834359e7c9eb3a36b6e37b24f1 862 Pfam PF02384 N-6 DNA Methylase 162 478 3.0E-101 T 12-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 M892_07355 8e7255834359e7c9eb3a36b6e37b24f1 862 Pfam PF12161 HsdM N-terminal domain 6 150 1.2E-15 T 12-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain M892_06765 124dfff610009ef7ea412fde99e09806 418 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 154 2.0E-49 T 12-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 M892_06765 124dfff610009ef7ea412fde99e09806 418 PIRSF PIRSF000445 1 418 1.0E-155 T 12-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 M892_06765 124dfff610009ef7ea412fde99e09806 418 Gene3D G3DSA:3.40.50.720 159 311 2.5E-43 T 12-10-2018 M892_06765 124dfff610009ef7ea412fde99e09806 418 SUPERFAMILY SSF69742 1 156 4.97E-47 T 12-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 M892_06765 124dfff610009ef7ea412fde99e09806 418 SUPERFAMILY SSF69075 315 416 5.89E-29 T 12-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 M892_06765 124dfff610009ef7ea412fde99e09806 418 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 170 304 2.6E-48 T 12-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase M892_06765 124dfff610009ef7ea412fde99e09806 418 SUPERFAMILY SSF51735 160 313 3.85E-36 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_06765 124dfff610009ef7ea412fde99e09806 418 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 97 120 - T 12-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 M892_06765 124dfff610009ef7ea412fde99e09806 418 Gene3D G3DSA:3.30.460.30 1 156 1.7E-55 T 12-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 M892_06765 124dfff610009ef7ea412fde99e09806 418 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 415 2.7E-142 T 12-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 M892_06765 124dfff610009ef7ea412fde99e09806 418 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 416 30.52 T 12-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 M892_06765 124dfff610009ef7ea412fde99e09806 418 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 318 414 8.6E-24 T 12-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 M892_21960 12199ec2999c8921a913dac4082ce603 126 Pfam PF01597 Glycine cleavage H-protein 5 125 7.9E-50 T 12-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate M892_21960 12199ec2999c8921a913dac4082ce603 126 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 2 124 41.44 T 12-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 M892_21960 12199ec2999c8921a913dac4082ce603 126 Gene3D G3DSA:2.40.50.100 1 126 8.2E-51 T 12-10-2018 M892_21960 12199ec2999c8921a913dac4082ce603 126 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 125 1.2E-51 T 12-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 M892_21960 12199ec2999c8921a913dac4082ce603 126 SUPERFAMILY SSF51230 3 125 1.44E-45 T 12-10-2018 IPR011053 Single hybrid motif M892_05835 75d4bc21e4c8309d6e790b3be44ab711 350 Gene3D G3DSA:2.40.50.100 42 170 1.1E-67 T 12-10-2018 M892_05835 75d4bc21e4c8309d6e790b3be44ab711 350 Gene3D G3DSA:2.40.30.170 29 252 1.1E-67 T 12-10-2018 M892_05835 75d4bc21e4c8309d6e790b3be44ab711 350 SUPERFAMILY SSF111369 32 247 1.44E-37 T 12-10-2018 M892_05835 75d4bc21e4c8309d6e790b3be44ab711 350 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 18 323 1.1E-84 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 M892_05835 75d4bc21e4c8309d6e790b3be44ab711 350 Gene3D G3DSA:1.10.287.470 77 136 1.1E-67 T 12-10-2018 M892_05835 75d4bc21e4c8309d6e790b3be44ab711 350 Gene3D G3DSA:2.40.420.20 253 320 1.1E-67 T 12-10-2018 M892_05835 75d4bc21e4c8309d6e790b3be44ab711 350 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 28 242 5.6E-28 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain M892_21780 278f31424ecd406ac445790286fd4ed2 246 Pfam PF00800 Prephenate dehydratase 34 217 9.6E-18 T 12-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 M892_21780 278f31424ecd406ac445790286fd4ed2 246 Gene3D G3DSA:3.40.190.10 117 208 9.8E-19 T 12-10-2018 M892_21780 278f31424ecd406ac445790286fd4ed2 246 SUPERFAMILY SSF53850 31 217 5.64E-12 T 12-10-2018 M892_21780 278f31424ecd406ac445790286fd4ed2 246 Gene3D G3DSA:3.40.190.10 37 216 9.8E-19 T 12-10-2018 M892_08410 60fb46333ae64505bb9ac2fc767f4a92 601 Pfam PF00905 Penicillin binding protein transpeptidase domain 288 584 1.5E-76 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 M892_08410 60fb46333ae64505bb9ac2fc767f4a92 601 Pfam PF03717 Penicillin-binding Protein dimerisation domain 95 249 1.1E-19 T 12-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 M892_08410 60fb46333ae64505bb9ac2fc767f4a92 601 SUPERFAMILY SSF56519 91 262 3.66E-45 T 12-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 M892_08410 60fb46333ae64505bb9ac2fc767f4a92 601 Gene3D G3DSA:3.30.450.330 264 588 1.8E-104 T 12-10-2018 M892_08410 60fb46333ae64505bb9ac2fc767f4a92 601 Gene3D G3DSA:3.40.710.10 324 506 1.8E-104 T 12-10-2018 M892_08410 60fb46333ae64505bb9ac2fc767f4a92 601 Hamap MF_02080 Peptidoglycan D,D-transpeptidase FtsI [ftsI]. 47 599 44.937 T 12-10-2018 IPR037532 Peptidoglycan D,D-transpeptidase FtsI GO:0005887|GO:0008658|GO:0008955|GO:0009252|GO:0051301 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 M892_08410 60fb46333ae64505bb9ac2fc767f4a92 601 SUPERFAMILY SSF56601 263 592 4.19E-91 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like M892_08410 60fb46333ae64505bb9ac2fc767f4a92 601 Gene3D G3DSA:3.90.1310.30 87 262 4.7E-45 T 12-10-2018 M892_12355 1e8ba495f4d572b3dd841e5d97c31c28 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 393 1.3E-230 T 12-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 M892_12355 1e8ba495f4d572b3dd841e5d97c31c28 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 2.4E-33 T 12-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal M892_12355 1e8ba495f4d572b3dd841e5d97c31c28 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 3.4E-16 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 M892_12355 1e8ba495f4d572b3dd841e5d97c31c28 394 SUPERFAMILY SSF50447 205 301 1.47E-29 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily M892_12355 1e8ba495f4d572b3dd841e5d97c31c28 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site M892_12355 1e8ba495f4d572b3dd841e5d97c31c28 394 SUPERFAMILY SSF50465 302 394 1.99E-35 T 12-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal M892_12355 1e8ba495f4d572b3dd841e5d97c31c28 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 6.2E-14 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 M892_12355 1e8ba495f4d572b3dd841e5d97c31c28 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 59.449 T 12-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 M892_12355 1e8ba495f4d572b3dd841e5d97c31c28 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 6.8E-58 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M892_12355 1e8ba495f4d572b3dd841e5d97c31c28 394 Gene3D G3DSA:3.40.50.300 1 203 3.3E-69 T 12-10-2018 M892_12355 1e8ba495f4d572b3dd841e5d97c31c28 394 Gene3D G3DSA:2.40.30.10 338 393 4.9E-29 T 12-10-2018 M892_12355 1e8ba495f4d572b3dd841e5d97c31c28 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.7E-23 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M892_12355 1e8ba495f4d572b3dd841e5d97c31c28 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.7E-23 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M892_12355 1e8ba495f4d572b3dd841e5d97c31c28 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.7E-23 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M892_12355 1e8ba495f4d572b3dd841e5d97c31c28 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.7E-23 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M892_12355 1e8ba495f4d572b3dd841e5d97c31c28 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.7E-23 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M892_12355 1e8ba495f4d572b3dd841e5d97c31c28 394 SUPERFAMILY SSF52540 6 219 4.98E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_12355 1e8ba495f4d572b3dd841e5d97c31c28 394 Gene3D G3DSA:2.40.30.10 206 334 9.7E-52 T 12-10-2018 M892_14105 6d2dfc3400839de2809dbe3c7d28c9f9 495 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 410 28.829 T 12-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 M892_14105 6d2dfc3400839de2809dbe3c7d28c9f9 495 SUPERFAMILY SSF47794 429 492 1.08E-16 T 12-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 M892_14105 6d2dfc3400839de2809dbe3c7d28c9f9 495 Pfam PF14520 Helix-hairpin-helix domain 370 412 0.0037 T 12-10-2018 M892_14105 6d2dfc3400839de2809dbe3c7d28c9f9 495 Pfam PF14520 Helix-hairpin-helix domain 432 486 2.1E-8 T 12-10-2018 M892_14105 6d2dfc3400839de2809dbe3c7d28c9f9 495 SUPERFAMILY SSF54814 201 278 9.81E-29 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 M892_14105 6d2dfc3400839de2809dbe3c7d28c9f9 495 Gene3D G3DSA:2.40.50.140 135 198 7.3E-17 T 12-10-2018 M892_14105 6d2dfc3400839de2809dbe3c7d28c9f9 495 Pfam PF08529 NusA N-terminal domain 4 123 1.0E-36 T 12-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 M892_14105 6d2dfc3400839de2809dbe3c7d28c9f9 495 Pfam PF13184 NusA-like KH domain 230 297 3.1E-27 T 12-10-2018 IPR025249 KH domain, NusA-like GO:0003723 M892_14105 6d2dfc3400839de2809dbe3c7d28c9f9 495 Gene3D G3DSA:3.30.300.20 278 345 1.3E-24 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta M892_14105 6d2dfc3400839de2809dbe3c7d28c9f9 495 SUPERFAMILY SSF54814 279 342 2.75E-15 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 M892_14105 6d2dfc3400839de2809dbe3c7d28c9f9 495 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 342 7.1E-126 T 12-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 M892_14105 6d2dfc3400839de2809dbe3c7d28c9f9 495 Gene3D G3DSA:3.30.1480.10 1 129 1.1E-44 T 12-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 M892_14105 6d2dfc3400839de2809dbe3c7d28c9f9 495 Gene3D G3DSA:1.10.150.20 352 421 3.6E-29 T 12-10-2018 M892_14105 6d2dfc3400839de2809dbe3c7d28c9f9 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 365 414 1.9E-22 T 12-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication M892_14105 6d2dfc3400839de2809dbe3c7d28c9f9 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 440 489 1.5E-18 T 12-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication M892_14105 6d2dfc3400839de2809dbe3c7d28c9f9 495 SUPERFAMILY SSF69705 1 126 1.15E-41 T 12-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 M892_14105 6d2dfc3400839de2809dbe3c7d28c9f9 495 Gene3D G3DSA:1.10.150.20 431 490 7.9E-25 T 12-10-2018 M892_14105 6d2dfc3400839de2809dbe3c7d28c9f9 495 SUPERFAMILY SSF50249 132 199 1.8E-16 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M892_14105 6d2dfc3400839de2809dbe3c7d28c9f9 495 Gene3D G3DSA:3.30.300.20 199 277 2.4E-30 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta M892_14105 6d2dfc3400839de2809dbe3c7d28c9f9 495 SUPERFAMILY SSF47794 356 415 8.79E-17 T 12-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 M892_14105 6d2dfc3400839de2809dbe3c7d28c9f9 495 SMART SM00316 133 198 1.1E-5 T 12-10-2018 IPR022967 RNA-binding domain, S1 M892_14960 4c876bf76b38a83fdcca61ca6ed9626f 212 Pfam PF01351 Ribonuclease HII 27 203 3.6E-38 T 12-10-2018 IPR024567 Ribonuclease HII/HIII domain M892_14960 4c876bf76b38a83fdcca61ca6ed9626f 212 SUPERFAMILY SSF53098 19 209 3.95E-71 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_14960 4c876bf76b38a83fdcca61ca6ed9626f 212 Hamap MF_00052_B Ribonuclease HII [rnhB]. 25 204 37.979 T 12-10-2018 IPR022898 Ribonuclease HII GO:0004523 M892_14960 4c876bf76b38a83fdcca61ca6ed9626f 212 Gene3D G3DSA:3.30.420.10 7 212 1.5E-79 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M892_27210 f5402e0e9196e49915a49d0556218c29 185 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 185 8.6E-105 T 12-10-2018 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 M892_27210 f5402e0e9196e49915a49d0556218c29 185 Gene3D G3DSA:3.40.30.10 1 184 6.0E-63 T 12-10-2018 M892_27210 f5402e0e9196e49915a49d0556218c29 185 SUPERFAMILY SSF52833 2 184 4.54E-56 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M892_27210 f5402e0e9196e49915a49d0556218c29 185 PIRSF PIRSF000239 1 185 7.8E-54 T 12-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 M892_27210 f5402e0e9196e49915a49d0556218c29 185 Pfam PF00578 AhpC/TSA family 4 131 3.1E-35 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 M892_27210 f5402e0e9196e49915a49d0556218c29 185 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 154 179 7.9E-7 T 12-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 M892_22195 63d2e6490b14adfd117c9fc8b4a3ee4b 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.8E-20 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_22195 63d2e6490b14adfd117c9fc8b4a3ee4b 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.2E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_22195 63d2e6490b14adfd117c9fc8b4a3ee4b 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.2E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_22195 63d2e6490b14adfd117c9fc8b4a3ee4b 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.2E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_22195 63d2e6490b14adfd117c9fc8b4a3ee4b 301 SUPERFAMILY SSF46785 3 111 7.91E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_22195 63d2e6490b14adfd117c9fc8b4a3ee4b 301 Gene3D G3DSA:1.10.10.10 3 89 4.3E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_22195 63d2e6490b14adfd117c9fc8b4a3ee4b 301 SUPERFAMILY SSF53850 90 285 1.86E-37 T 12-10-2018 M892_22195 63d2e6490b14adfd117c9fc8b4a3ee4b 301 Gene3D G3DSA:3.40.190.290 92 292 6.2E-35 T 12-10-2018 M892_22195 63d2e6490b14adfd117c9fc8b4a3ee4b 301 Pfam PF03466 LysR substrate binding domain 90 284 2.0E-41 T 12-10-2018 IPR005119 LysR, substrate-binding M892_04060 0c321c541145da2d85b4f9fdd39d59ca 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 3.9E-18 T 12-10-2018 IPR000362 Fumarate lyase family M892_04060 0c321c541145da2d85b4f9fdd39d59ca 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 3.9E-18 T 12-10-2018 IPR000362 Fumarate lyase family M892_04060 0c321c541145da2d85b4f9fdd39d59ca 456 PRINTS PR00149 Fumarate lyase superfamily signature 252 279 3.9E-18 T 12-10-2018 IPR000362 Fumarate lyase family M892_04060 0c321c541145da2d85b4f9fdd39d59ca 456 PRINTS PR00149 Fumarate lyase superfamily signature 295 311 3.9E-18 T 12-10-2018 IPR000362 Fumarate lyase family M892_04060 0c321c541145da2d85b4f9fdd39d59ca 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 456 1.3E-151 T 12-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 M892_04060 0c321c541145da2d85b4f9fdd39d59ca 456 Gene3D G3DSA:1.10.275.10 1 117 2.0E-50 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal M892_04060 0c321c541145da2d85b4f9fdd39d59ca 456 Gene3D G3DSA:1.20.200.10 118 447 4.9E-159 T 12-10-2018 M892_04060 0c321c541145da2d85b4f9fdd39d59ca 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 332 446 2.6E-52 T 12-10-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 M892_04060 0c321c541145da2d85b4f9fdd39d59ca 456 ProSitePatterns PS00163 Fumarate lyases signature. 295 304 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 M892_04060 0c321c541145da2d85b4f9fdd39d59ca 456 Pfam PF00206 Lyase 14 313 4.2E-75 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal M892_04060 0c321c541145da2d85b4f9fdd39d59ca 456 SUPERFAMILY SSF48557 4 448 5.5E-109 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 M892_04060 0c321c541145da2d85b4f9fdd39d59ca 456 Gene3D G3DSA:1.10.40.30 383 446 4.9E-159 T 12-10-2018 M892_13550 57695c7a0edf046043f390fcf321e5fb 865 Pfam PF01411 tRNA synthetases class II (A) 7 560 4.9E-225 T 12-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 M892_13550 57695c7a0edf046043f390fcf321e5fb 865 Gene3D G3DSA:3.10.310.40 754 862 6.6E-33 T 12-10-2018 M892_13550 57695c7a0edf046043f390fcf321e5fb 865 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 865 197.638 T 12-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 M892_13550 57695c7a0edf046043f390fcf321e5fb 865 SUPERFAMILY SSF55681 3 254 1.64E-108 T 12-10-2018 M892_13550 57695c7a0edf046043f390fcf321e5fb 865 Gene3D G3DSA:2.40.30.130 468 556 5.4E-10 T 12-10-2018 M892_13550 57695c7a0edf046043f390fcf321e5fb 865 Gene3D G3DSA:3.30.930.10 2 251 2.0E-120 T 12-10-2018 M892_13550 57695c7a0edf046043f390fcf321e5fb 865 SUPERFAMILY SSF50447 458 556 3.5E-18 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily M892_13550 57695c7a0edf046043f390fcf321e5fb 865 Gene3D G3DSA:3.30.980.10 567 701 6.7E-50 T 12-10-2018 M892_13550 57695c7a0edf046043f390fcf321e5fb 865 PRINTS PR00980 Alanyl-tRNA synthetase signature 208 219 4.8E-31 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 M892_13550 57695c7a0edf046043f390fcf321e5fb 865 PRINTS PR00980 Alanyl-tRNA synthetase signature 235 248 4.8E-31 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 M892_13550 57695c7a0edf046043f390fcf321e5fb 865 PRINTS PR00980 Alanyl-tRNA synthetase signature 281 297 4.8E-31 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 M892_13550 57695c7a0edf046043f390fcf321e5fb 865 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 4.8E-31 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 M892_13550 57695c7a0edf046043f390fcf321e5fb 865 PRINTS PR00980 Alanyl-tRNA synthetase signature 305 318 4.8E-31 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 M892_13550 57695c7a0edf046043f390fcf321e5fb 865 SUPERFAMILY SSF55186 556 715 2.62E-53 T 12-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 M892_13550 57695c7a0edf046043f390fcf321e5fb 865 SUPERFAMILY SSF101353 255 467 9.55E-60 T 12-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 M892_13550 57695c7a0edf046043f390fcf321e5fb 865 SMART SM00863 657 700 3.3E-21 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 M892_13550 57695c7a0edf046043f390fcf321e5fb 865 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 657 700 1.2E-17 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 M892_13550 57695c7a0edf046043f390fcf321e5fb 865 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 7 844 0.0 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 M892_13550 57695c7a0edf046043f390fcf321e5fb 865 Pfam PF02272 DHHA1 domain 727 859 1.1E-27 T 12-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 M892_13550 57695c7a0edf046043f390fcf321e5fb 865 Gene3D G3DSA:3.30.54.20 628 681 6.7E-50 T 12-10-2018 M892_01580 e37362d1c9e3e03543a298aa5600548e 249 Pfam PF00005 ABC transporter 24 172 2.2E-39 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_01580 e37362d1c9e3e03543a298aa5600548e 249 Gene3D G3DSA:3.40.50.300 6 249 2.0E-80 T 12-10-2018 M892_01580 e37362d1c9e3e03543a298aa5600548e 249 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_01580 e37362d1c9e3e03543a298aa5600548e 249 SMART SM00382 33 220 2.6E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_01580 e37362d1c9e3e03543a298aa5600548e 249 SUPERFAMILY SSF52540 8 242 1.49E-82 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_01580 e37362d1c9e3e03543a298aa5600548e 249 PIRSF PIRSF039085 5 248 5.8E-111 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 M892_11790 14a1018e6bff0ff6ebaaf5c4739cb869 461 Pfam PF10415 Fumarase C C-terminus 403 455 8.3E-19 T 12-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 M892_11790 14a1018e6bff0ff6ebaaf5c4739cb869 461 Gene3D G3DSA:1.10.275.10 6 133 6.4E-49 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal M892_11790 14a1018e6bff0ff6ebaaf5c4739cb869 461 PRINTS PR00149 Fumarate lyase superfamily signature 175 193 9.2E-31 T 12-10-2018 IPR000362 Fumarate lyase family M892_11790 14a1018e6bff0ff6ebaaf5c4739cb869 461 PRINTS PR00149 Fumarate lyase superfamily signature 266 293 9.2E-31 T 12-10-2018 IPR000362 Fumarate lyase family M892_11790 14a1018e6bff0ff6ebaaf5c4739cb869 461 PRINTS PR00149 Fumarate lyase superfamily signature 129 147 9.2E-31 T 12-10-2018 IPR000362 Fumarate lyase family M892_11790 14a1018e6bff0ff6ebaaf5c4739cb869 461 PRINTS PR00149 Fumarate lyase superfamily signature 312 328 9.2E-31 T 12-10-2018 IPR000362 Fumarate lyase family M892_11790 14a1018e6bff0ff6ebaaf5c4739cb869 461 SUPERFAMILY SSF48557 5 455 1.27E-134 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 M892_11790 14a1018e6bff0ff6ebaaf5c4739cb869 461 ProSitePatterns PS00163 Fumarate lyases signature. 312 321 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 M892_11790 14a1018e6bff0ff6ebaaf5c4739cb869 461 PRINTS PR00145 Argininosuccinate lyase family signature 128 150 5.6E-6 T 12-10-2018 M892_11790 14a1018e6bff0ff6ebaaf5c4739cb869 461 PRINTS PR00145 Argininosuccinate lyase family signature 312 328 5.6E-6 T 12-10-2018 M892_11790 14a1018e6bff0ff6ebaaf5c4739cb869 461 PRINTS PR00145 Argininosuccinate lyase family signature 170 190 5.6E-6 T 12-10-2018 M892_11790 14a1018e6bff0ff6ebaaf5c4739cb869 461 Gene3D G3DSA:1.20.200.10 134 400 1.7E-94 T 12-10-2018 M892_11790 14a1018e6bff0ff6ebaaf5c4739cb869 461 Pfam PF00206 Lyase 13 337 5.7E-90 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal M892_11790 14a1018e6bff0ff6ebaaf5c4739cb869 461 Hamap MF_00743 Fumarate hydratase class II [fumC]. 5 457 74.468 T 12-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 M892_11790 14a1018e6bff0ff6ebaaf5c4739cb869 461 Gene3D G3DSA:1.10.40.30 403 454 1.7E-18 T 12-10-2018 M892_10605 ae39b00633be671e84937f1065914850 270 ProSitePatterns PS00449 ATP synthase a subunit signature. 203 212 - T 12-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_10605 ae39b00633be671e84937f1065914850 270 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 35 263 7.2E-46 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_10605 ae39b00633be671e84937f1065914850 270 SUPERFAMILY SSF81336 93 262 9.55E-50 T 12-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_10605 ae39b00633be671e84937f1065914850 270 Gene3D G3DSA:1.20.120.220 92 268 2.6E-66 T 12-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_10605 ae39b00633be671e84937f1065914850 270 Hamap MF_01393 ATP synthase subunit a [atpB]. 14 268 15.204 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_10605 ae39b00633be671e84937f1065914850 270 PRINTS PR00123 ATP synthase A subunit signature 200 222 2.3E-13 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_10605 ae39b00633be671e84937f1065914850 270 PRINTS PR00123 ATP synthase A subunit signature 101 117 2.3E-13 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_10605 ae39b00633be671e84937f1065914850 270 PRINTS PR00123 ATP synthase A subunit signature 248 263 2.3E-13 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_10605 ae39b00633be671e84937f1065914850 270 Pfam PF00119 ATP synthase A chain 44 262 1.3E-57 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_09440 256b30c61a072cb0a3a784463ab45844 313 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 309 1.2E-126 T 12-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 M892_09440 256b30c61a072cb0a3a784463ab45844 313 Gene3D G3DSA:3.90.25.10 173 295 1.4E-115 T 12-10-2018 M892_09440 256b30c61a072cb0a3a784463ab45844 313 Gene3D G3DSA:3.40.50.720 3 307 1.4E-115 T 12-10-2018 M892_09440 256b30c61a072cb0a3a784463ab45844 313 SUPERFAMILY SSF51735 1 308 1.19E-57 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_09440 256b30c61a072cb0a3a784463ab45844 313 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 241 7.3E-45 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 M892_09440 256b30c61a072cb0a3a784463ab45844 313 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 313 46.235 T 12-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 M892_02470 bafb35d83f19e7ef6e3bb990797bc9bb 368 PIRSF PIRSF001123 100 190 5.6E-4 T 12-10-2018 IPR008007 Peptidase M42 M892_02470 bafb35d83f19e7ef6e3bb990797bc9bb 368 PIRSF PIRSF001123 6 105 0.047 T 12-10-2018 IPR008007 Peptidase M42 M892_02470 bafb35d83f19e7ef6e3bb990797bc9bb 368 PIRSF PIRSF001123 284 368 4.5E-4 T 12-10-2018 IPR008007 Peptidase M42 M892_02470 bafb35d83f19e7ef6e3bb990797bc9bb 368 TIGRFAM TIGR01883 PepT-like: peptidase T-like protein 8 362 1.3E-157 T 12-10-2018 IPR010162 Peptidase M20B, peptidase T-like M892_02470 bafb35d83f19e7ef6e3bb990797bc9bb 368 SUPERFAMILY SSF53187 7 367 1.81E-58 T 12-10-2018 M892_02470 bafb35d83f19e7ef6e3bb990797bc9bb 368 Pfam PF07687 Peptidase dimerisation domain 182 273 5.5E-15 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain M892_02470 bafb35d83f19e7ef6e3bb990797bc9bb 368 SUPERFAMILY SSF55031 177 289 5.23E-22 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain M892_02470 bafb35d83f19e7ef6e3bb990797bc9bb 368 Gene3D G3DSA:3.40.630.10 16 362 1.2E-112 T 12-10-2018 M892_02470 bafb35d83f19e7ef6e3bb990797bc9bb 368 Pfam PF01546 Peptidase family M20/M25/M40 73 367 6.3E-18 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 M892_02470 bafb35d83f19e7ef6e3bb990797bc9bb 368 Gene3D G3DSA:3.30.70.360 176 287 1.2E-112 T 12-10-2018 M892_20680 3b500b8748f906bf04934cd444392324 275 SUPERFAMILY SSF51215 30 156 1.31E-17 T 12-10-2018 IPR037923 Transcription regulator HTH-like M892_20680 3b500b8748f906bf04934cd444392324 275 Gene3D G3DSA:1.10.10.60 169 232 2.2E-15 T 12-10-2018 M892_20680 3b500b8748f906bf04934cd444392324 275 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 227 268 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 M892_20680 3b500b8748f906bf04934cd444392324 275 SMART SM00342 190 272 1.5E-29 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M892_20680 3b500b8748f906bf04934cd444392324 275 Pfam PF02311 AraC-like ligand binding domain 18 150 4.1E-27 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 M892_20680 3b500b8748f906bf04934cd444392324 275 Gene3D G3DSA:1.10.10.60 233 275 2.1E-14 T 12-10-2018 M892_20680 3b500b8748f906bf04934cd444392324 275 Pfam PF12833 Helix-turn-helix domain 196 273 9.2E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M892_20680 3b500b8748f906bf04934cd444392324 275 SUPERFAMILY SSF46689 174 224 1.34E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_20680 3b500b8748f906bf04934cd444392324 275 SUPERFAMILY SSF46689 227 274 2.02E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_27505 062f7b71cc98615c3d6c2f04da27a552 497 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 36 437 7.7E-95 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 M892_27505 062f7b71cc98615c3d6c2f04da27a552 497 Pfam PF00474 Sodium:solute symporter family 36 437 5.6E-106 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 M892_27505 062f7b71cc98615c3d6c2f04da27a552 497 Gene3D G3DSA:1.20.1730.10 12 495 1.1E-95 T 12-10-2018 IPR038377 Sodium/glucose symporter superfamily M892_27505 062f7b71cc98615c3d6c2f04da27a552 497 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 7 489 4.0E-216 T 12-10-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 M892_07595 78ba1ee260e35c65e03f0ce2eb1f2e61 431 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 275 282 - T 12-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 M892_07595 78ba1ee260e35c65e03f0ce2eb1f2e61 431 Hamap MF_00504 Peptidase B [pepB]. 3 427 65.584 T 12-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 M892_07595 78ba1ee260e35c65e03f0ce2eb1f2e61 431 PRINTS PR00481 Cytosol aminopeptidase signature 190 207 3.4E-45 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 M892_07595 78ba1ee260e35c65e03f0ce2eb1f2e61 431 PRINTS PR00481 Cytosol aminopeptidase signature 212 233 3.4E-45 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 M892_07595 78ba1ee260e35c65e03f0ce2eb1f2e61 431 PRINTS PR00481 Cytosol aminopeptidase signature 249 270 3.4E-45 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 M892_07595 78ba1ee260e35c65e03f0ce2eb1f2e61 431 PRINTS PR00481 Cytosol aminopeptidase signature 299 314 3.4E-45 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 M892_07595 78ba1ee260e35c65e03f0ce2eb1f2e61 431 PRINTS PR00481 Cytosol aminopeptidase signature 271 291 3.4E-45 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 M892_07595 78ba1ee260e35c65e03f0ce2eb1f2e61 431 PIRSF PIRSF036388 1 431 6.8E-223 T 12-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 M892_07595 78ba1ee260e35c65e03f0ce2eb1f2e61 431 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 109 421 6.7E-103 T 12-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 M892_07595 78ba1ee260e35c65e03f0ce2eb1f2e61 431 Pfam PF12404 Peptidase 5 81 7.3E-34 T 12-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 M892_07595 78ba1ee260e35c65e03f0ce2eb1f2e61 431 Gene3D G3DSA:3.40.630.10 92 431 1.7E-107 T 12-10-2018 M892_07595 78ba1ee260e35c65e03f0ce2eb1f2e61 431 SUPERFAMILY SSF53187 106 426 2.13E-101 T 12-10-2018 M892_02325 27312acae9e74ee17ddc9885d7b61801 182 ProDom PD009560 CYCLASE ADENYLATE CYCLASE ADENYLYL CYAB LYASE CLASS CYAB-TYPE THERMOPHILIC MJ0240 11 139 8.0E-9 T 12-10-2018 M892_02325 27312acae9e74ee17ddc9885d7b61801 182 SMART SM01118 10 181 3.6E-17 T 12-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 M892_02325 27312acae9e74ee17ddc9885d7b61801 182 TIGRFAM TIGR00318 cyaB: putative adenylyl cyclase CyaB 11 177 3.3E-18 T 12-10-2018 IPR008173 Adenylyl cyclase CyaB KEGG: 00230+4.6.1.1 M892_02325 27312acae9e74ee17ddc9885d7b61801 182 Gene3D G3DSA:2.40.320.10 2 182 1.5E-48 T 12-10-2018 M892_02325 27312acae9e74ee17ddc9885d7b61801 182 SUPERFAMILY SSF55154 11 178 1.55E-38 T 12-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 M892_02325 27312acae9e74ee17ddc9885d7b61801 182 Pfam PF01928 CYTH domain 11 175 3.4E-21 T 12-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 M892_19650 4681c09c7f6caab68110e60bf676ed51 802 SUPERFAMILY SSF49785 3 189 7.99E-47 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily M892_19650 4681c09c7f6caab68110e60bf676ed51 802 Gene3D G3DSA:3.20.20.80 283 629 4.9E-121 T 12-10-2018 M892_19650 4681c09c7f6caab68110e60bf676ed51 802 Gene3D G3DSA:2.60.120.260 4 190 8.5E-47 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily M892_19650 4681c09c7f6caab68110e60bf676ed51 802 SUPERFAMILY SSF49303 193 285 1.32E-14 T 12-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily M892_19650 4681c09c7f6caab68110e60bf676ed51 802 SUPERFAMILY SSF49303 732 800 6.33E-6 T 12-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily M892_19650 4681c09c7f6caab68110e60bf676ed51 802 Pfam PF00703 Glycosyl hydrolases family 2 211 286 1.0E-4 T 12-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 M892_19650 4681c09c7f6caab68110e60bf676ed51 802 Gene3D G3DSA:2.60.40.10 191 282 6.4E-10 T 12-10-2018 IPR013783 Immunoglobulin-like fold M892_19650 4681c09c7f6caab68110e60bf676ed51 802 SUPERFAMILY SSF51445 283 631 3.56E-102 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily M892_03210 28f27b41c2e303e9e8107d17587477e7 347 Pfam PF02371 Transposase IS116/IS110/IS902 family 221 305 1.9E-19 T 12-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 M892_03210 28f27b41c2e303e9e8107d17587477e7 347 Pfam PF01548 Transposase 12 156 7.2E-15 T 12-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 M892_05705 28f27b41c2e303e9e8107d17587477e7 347 Pfam PF02371 Transposase IS116/IS110/IS902 family 221 305 1.9E-19 T 12-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 M892_05705 28f27b41c2e303e9e8107d17587477e7 347 Pfam PF01548 Transposase 12 156 7.2E-15 T 12-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 M892_03585 28f27b41c2e303e9e8107d17587477e7 347 Pfam PF02371 Transposase IS116/IS110/IS902 family 221 305 1.9E-19 T 12-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 M892_03585 28f27b41c2e303e9e8107d17587477e7 347 Pfam PF01548 Transposase 12 156 7.2E-15 T 12-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 M892_25200 28f27b41c2e303e9e8107d17587477e7 347 Pfam PF02371 Transposase IS116/IS110/IS902 family 221 305 1.9E-19 T 12-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 M892_25200 28f27b41c2e303e9e8107d17587477e7 347 Pfam PF01548 Transposase 12 156 7.2E-15 T 12-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 M892_09550 d67156a14dab0665a2ed146a47d111bd 159 Gene3D G3DSA:3.40.50.620 1 159 1.9E-56 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M892_09550 d67156a14dab0665a2ed146a47d111bd 159 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 2 158 36.105 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 M892_09550 d67156a14dab0665a2ed146a47d111bd 159 Pfam PF01467 Cytidylyltransferase-like 5 133 4.1E-22 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 M892_09550 d67156a14dab0665a2ed146a47d111bd 159 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 62 8.4E-19 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 M892_09550 d67156a14dab0665a2ed146a47d111bd 159 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 11 77 0.002 T 12-10-2018 M892_09550 d67156a14dab0665a2ed146a47d111bd 159 SUPERFAMILY SSF52374 2 155 2.68E-45 T 12-10-2018 M892_09550 d67156a14dab0665a2ed146a47d111bd 159 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 4 156 1.2E-60 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 M892_09550 d67156a14dab0665a2ed146a47d111bd 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 2 20 3.0E-51 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 M892_09550 d67156a14dab0665a2ed146a47d111bd 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 112 134 3.0E-51 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 M892_09550 d67156a14dab0665a2ed146a47d111bd 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 85 101 3.0E-51 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 M892_09550 d67156a14dab0665a2ed146a47d111bd 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 20 41 3.0E-51 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 M892_09550 d67156a14dab0665a2ed146a47d111bd 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 49 73 3.0E-51 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 M892_09010 d7049bf4904d18c1a12700f1043ee5b0 164 Gene3D G3DSA:2.40.50.870 23 164 6.6E-46 T 12-10-2018 M892_09010 d7049bf4904d18c1a12700f1043ee5b0 164 Pfam PF11736 Protein of unknown function (DUF3299) 30 159 1.2E-43 T 12-10-2018 IPR021727 Protein of unknown function DUF3299 M892_18730 411964ab8bf0c1892e62de36eec905b9 206 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 127 204 1.3E-16 T 12-10-2018 IPR006260 TonB/TolA, C-terminal M892_18730 411964ab8bf0c1892e62de36eec905b9 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 121 142 5.7E-14 T 12-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 M892_18730 411964ab8bf0c1892e62de36eec905b9 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 63 73 5.7E-14 T 12-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 M892_18730 411964ab8bf0c1892e62de36eec905b9 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 142 160 5.7E-14 T 12-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 M892_18730 411964ab8bf0c1892e62de36eec905b9 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 161 178 5.7E-14 T 12-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 M892_18730 411964ab8bf0c1892e62de36eec905b9 206 Gene3D G3DSA:3.30.1150.10 104 204 3.5E-25 T 12-10-2018 M892_18730 411964ab8bf0c1892e62de36eec905b9 206 SUPERFAMILY SSF74653 119 196 1.27E-22 T 12-10-2018 M892_18730 411964ab8bf0c1892e62de36eec905b9 206 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 125 204 1.2E-19 T 12-10-2018 IPR037682 TonB, C-terminal GO:0055085 M892_00490 406dd13f5e381b074c6430e68ed7256d 100 Gene3D G3DSA:3.30.2310.20 1 96 1.1E-19 T 12-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily M892_00490 406dd13f5e381b074c6430e68ed7256d 100 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 3 85 4.2E-7 T 12-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family M892_00490 406dd13f5e381b074c6430e68ed7256d 100 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 91 3.6E-18 T 12-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family M892_24200 c36eb589d170d6cd16040f5ce48ee4ce 430 SMART SM00487 20 229 6.2E-55 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain M892_24200 c36eb589d170d6cd16040f5ce48ee4ce 430 SUPERFAMILY SSF52540 75 356 4.91E-73 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_24200 c36eb589d170d6cd16040f5ce48ee4ce 430 Pfam PF00270 DEAD/DEAH box helicase 25 193 1.7E-51 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 M892_24200 c36eb589d170d6cd16040f5ce48ee4ce 430 SMART SM00490 258 339 1.3E-30 T 12-10-2018 IPR001650 Helicase, C-terminal M892_24200 c36eb589d170d6cd16040f5ce48ee4ce 430 Gene3D G3DSA:3.40.50.300 221 424 1.7E-48 T 12-10-2018 M892_24200 c36eb589d170d6cd16040f5ce48ee4ce 430 Pfam PF00271 Helicase conserved C-terminal domain 231 339 3.3E-29 T 12-10-2018 IPR001650 Helicase, C-terminal M892_24200 c36eb589d170d6cd16040f5ce48ee4ce 430 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 153 161 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site M892_24200 c36eb589d170d6cd16040f5ce48ee4ce 430 Gene3D G3DSA:3.40.50.300 1 220 5.6E-74 T 12-10-2018 M892_15260 b7f6928fcf550bde7cabce8fcccfe051 266 PRINTS PR01003 Flagellar assembly protein FliH signature 89 111 4.2E-5 T 12-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 M892_15260 b7f6928fcf550bde7cabce8fcccfe051 266 PRINTS PR01003 Flagellar assembly protein FliH signature 217 233 4.2E-5 T 12-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 M892_15260 b7f6928fcf550bde7cabce8fcccfe051 266 PRINTS PR01003 Flagellar assembly protein FliH signature 112 130 4.2E-5 T 12-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 M892_15260 b7f6928fcf550bde7cabce8fcccfe051 266 Pfam PF02108 Flagellar assembly protein FliH 125 251 7.6E-35 T 12-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE M892_24525 2daa01369ed001ebf26977b174cac2cf 591 SUPERFAMILY SSF53474 225 526 2.91E-32 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_24525 2daa01369ed001ebf26977b174cac2cf 591 Gene3D G3DSA:3.40.50.1820 222 518 9.2E-8 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_24525 2daa01369ed001ebf26977b174cac2cf 591 TIGRFAM TIGR01838 PHA_synth_I: poly(R)-hydroxyalkanoic acid synthase, class I 55 584 6.0E-248 T 12-10-2018 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I GO:0005737|GO:0016746|GO:0042619 M892_24525 2daa01369ed001ebf26977b174cac2cf 591 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 95 266 1.2E-73 T 12-10-2018 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 M892_17145 dab0fb7c772dd45193aebc635b7c60de 185 Gene3D G3DSA:1.20.120.1760 2 180 5.0E-17 T 12-10-2018 M892_17145 dab0fb7c772dd45193aebc635b7c60de 185 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 180 5.1E-54 T 12-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 M892_17145 dab0fb7c772dd45193aebc635b7c60de 185 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 M892_17145 dab0fb7c772dd45193aebc635b7c60de 185 PIRSF PIRSF000847 1 184 3.6E-46 T 12-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 M892_17145 dab0fb7c772dd45193aebc635b7c60de 185 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 71 1.4E-17 T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 M892_01295 2eb71934941ac0495e0478df6d2f6ed1 430 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 61 74 3.0E-6 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M892_01295 2eb71934941ac0495e0478df6d2f6ed1 430 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 187 200 3.0E-6 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M892_01295 2eb71934941ac0495e0478df6d2f6ed1 430 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 129 147 3.0E-6 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M892_01295 2eb71934941ac0495e0478df6d2f6ed1 430 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 66 272 5.0E-42 T 12-10-2018 IPR000477 Reverse transcriptase domain M892_01295 2eb71934941ac0495e0478df6d2f6ed1 430 SUPERFAMILY SSF56672 15 360 1.0E-50 T 12-10-2018 M892_01295 2eb71934941ac0495e0478df6d2f6ed1 430 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 8 350 5.0E-118 T 12-10-2018 IPR030931 Group II intron reverse transcriptase/maturase M892_01295 2eb71934941ac0495e0478df6d2f6ed1 430 Pfam PF08388 Group II intron, maturase-specific domain 288 356 2.5E-14 T 12-10-2018 IPR013597 Group II intron, maturase-specific M892_01595 a1f5b65283ceb953edededcf306f4f34 350 SMART SM00062 46 275 6.1E-51 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M892_01595 a1f5b65283ceb953edededcf306f4f34 350 SUPERFAMILY SSF53850 37 266 3.73E-48 T 12-10-2018 M892_01595 a1f5b65283ceb953edededcf306f4f34 350 Gene3D G3DSA:3.40.190.10 138 233 5.2E-50 T 12-10-2018 M892_01595 a1f5b65283ceb953edededcf306f4f34 350 Gene3D G3DSA:3.40.190.10 36 265 5.2E-50 T 12-10-2018 M892_01595 a1f5b65283ceb953edededcf306f4f34 350 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 47 265 1.4E-28 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M892_15045 e89eb87c08e56c944ce3769d8295cfdd 814 Pfam PF09317 Domain of unknown function (DUF1974) 515 796 1.4E-114 T 12-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 M892_15045 e89eb87c08e56c944ce3769d8295cfdd 814 SUPERFAMILY SSF47203 361 508 6.93E-23 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 M892_15045 e89eb87c08e56c944ce3769d8295cfdd 814 Gene3D G3DSA:2.40.110.10 237 360 8.3E-100 T 12-10-2018 M892_15045 e89eb87c08e56c944ce3769d8295cfdd 814 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 146 234 6.2E-16 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 M892_15045 e89eb87c08e56c944ce3769d8295cfdd 814 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 361 508 3.4E-13 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 M892_15045 e89eb87c08e56c944ce3769d8295cfdd 814 Gene3D G3DSA:1.10.540.10 123 236 8.3E-100 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 M892_15045 e89eb87c08e56c944ce3769d8295cfdd 814 Gene3D G3DSA:1.20.140.10 361 508 8.3E-100 T 12-10-2018 M892_15045 e89eb87c08e56c944ce3769d8295cfdd 814 SUPERFAMILY SSF56645 122 356 1.07E-43 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 M892_12205 df69a9351a0f01a635bf482d4fd35c21 982 SUPERFAMILY SSF56219 473 844 1.58E-34 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily M892_12205 df69a9351a0f01a635bf482d4fd35c21 982 Pfam PF00932 Lamin Tail Domain 20 129 8.8E-14 T 12-10-2018 IPR001322 Lamin tail domain M892_12205 df69a9351a0f01a635bf482d4fd35c21 982 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 961 981 0.0041 T 12-10-2018 IPR020008 GlyGly-CTERM domain M892_12205 df69a9351a0f01a635bf482d4fd35c21 982 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 478 836 9.2E-7 T 12-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase M892_10195 ba46af08d5d9c04e281d70d895101c1c 452 Gene3D G3DSA:3.50.50.60 5 315 3.4E-126 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_10195 ba46af08d5d9c04e281d70d895101c1c 452 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 5.2E-29 T 12-10-2018 M892_10195 ba46af08d5d9c04e281d70d895101c1c 452 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 5.2E-29 T 12-10-2018 M892_10195 ba46af08d5d9c04e281d70d895101c1c 452 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 5.2E-29 T 12-10-2018 M892_10195 ba46af08d5d9c04e281d70d895101c1c 452 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 5.2E-29 T 12-10-2018 M892_10195 ba46af08d5d9c04e281d70d895101c1c 452 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 5.2E-29 T 12-10-2018 M892_10195 ba46af08d5d9c04e281d70d895101c1c 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 403 418 6.4E-64 T 12-10-2018 M892_10195 ba46af08d5d9c04e281d70d895101c1c 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 336 357 6.4E-64 T 12-10-2018 M892_10195 ba46af08d5d9c04e281d70d895101c1c 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 6.4E-64 T 12-10-2018 M892_10195 ba46af08d5d9c04e281d70d895101c1c 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 425 445 6.4E-64 T 12-10-2018 M892_10195 ba46af08d5d9c04e281d70d895101c1c 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 6.4E-64 T 12-10-2018 M892_10195 ba46af08d5d9c04e281d70d895101c1c 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 6.4E-64 T 12-10-2018 M892_10195 ba46af08d5d9c04e281d70d895101c1c 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 6.4E-64 T 12-10-2018 M892_10195 ba46af08d5d9c04e281d70d895101c1c 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 6.4E-64 T 12-10-2018 M892_10195 ba46af08d5d9c04e281d70d895101c1c 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 6.4E-64 T 12-10-2018 M892_10195 ba46af08d5d9c04e281d70d895101c1c 452 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 319 7.6E-71 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 M892_10195 ba46af08d5d9c04e281d70d895101c1c 452 Gene3D G3DSA:3.30.390.30 339 451 5.8E-47 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 M892_10195 ba46af08d5d9c04e281d70d895101c1c 452 SUPERFAMILY SSF51905 1 365 4.43E-58 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_10195 ba46af08d5d9c04e281d70d895101c1c 452 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 340 450 1.4E-32 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 M892_10195 ba46af08d5d9c04e281d70d895101c1c 452 Gene3D G3DSA:3.50.50.60 144 261 3.4E-126 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_10195 ba46af08d5d9c04e281d70d895101c1c 452 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 4 450 6.8E-214 T 12-10-2018 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081|Reactome: R-HSA-2408550|Reactome: R-HSA-3299685|Reactome: R-HSA-499943|Reactome: R-HSA-5628897 M892_10195 ba46af08d5d9c04e281d70d895101c1c 452 SUPERFAMILY SSF55424 337 451 4.81E-35 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 M892_10195 ba46af08d5d9c04e281d70d895101c1c 452 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 12-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 M892_10195 ba46af08d5d9c04e281d70d895101c1c 452 PIRSF PIRSF000350 1 446 8.2E-83 T 12-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 M892_05920 bf44aa2ec8842f0807f9e855ac2ef3d7 440 SMART SM00471 58 264 1.3E-7 T 12-10-2018 IPR003607 HD/PDEase domain M892_05920 bf44aa2ec8842f0807f9e855ac2ef3d7 440 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 5 435 34.513 T 12-10-2018 IPR023023 dNTP triphosphohydrolase, type 2 GO:0016793 M892_05920 bf44aa2ec8842f0807f9e855ac2ef3d7 440 SUPERFAMILY SSF109604 19 437 6.03E-80 T 12-10-2018 M892_05920 bf44aa2ec8842f0807f9e855ac2ef3d7 440 Pfam PF13286 Phosphohydrolase-associated domain 343 433 9.2E-26 T 12-10-2018 IPR026875 Phosphohydrolase-associated domain M892_05920 bf44aa2ec8842f0807f9e855ac2ef3d7 440 Pfam PF01966 HD domain 62 147 7.3E-8 T 12-10-2018 IPR006674 HD domain M892_05920 bf44aa2ec8842f0807f9e855ac2ef3d7 440 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 24 436 4.6E-128 T 12-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 M892_26775 8a267cb19fd2fc8f8a24ca576d36e2d6 791 SUPERFAMILY SSF49785 679 790 1.74E-21 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily M892_26775 8a267cb19fd2fc8f8a24ca576d36e2d6 791 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 186 196 - T 12-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site M892_26775 8a267cb19fd2fc8f8a24ca576d36e2d6 791 Gene3D G3DSA:3.30.70.80 37 125 7.4E-6 T 12-10-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 M892_26775 8a267cb19fd2fc8f8a24ca576d36e2d6 791 SUPERFAMILY SSF54897 41 119 9.35E-5 T 12-10-2018 M892_26775 8a267cb19fd2fc8f8a24ca576d36e2d6 791 Pfam PF02225 PA domain 375 465 4.9E-7 T 12-10-2018 IPR003137 PA domain M892_26775 8a267cb19fd2fc8f8a24ca576d36e2d6 791 Gene3D G3DSA:2.60.120.260 677 791 2.5E-14 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily M892_26775 8a267cb19fd2fc8f8a24ca576d36e2d6 791 Gene3D G3DSA:3.50.30.30 335 480 5.5E-157 T 12-10-2018 M892_26775 8a267cb19fd2fc8f8a24ca576d36e2d6 791 Gene3D G3DSA:3.40.50.200 144 545 5.5E-157 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 M892_26775 8a267cb19fd2fc8f8a24ca576d36e2d6 791 Pfam PF01483 Proprotein convertase P-domain 711 790 7.3E-20 T 12-10-2018 IPR002884 P domain GO:0004252|GO:0006508 M892_26775 8a267cb19fd2fc8f8a24ca576d36e2d6 791 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 488 498 - T 12-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site M892_26775 8a267cb19fd2fc8f8a24ca576d36e2d6 791 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 584 652 7.5E-11 T 12-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial M892_26775 8a267cb19fd2fc8f8a24ca576d36e2d6 791 Pfam PF00082 Subtilase family 146 374 4.6E-25 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 M892_26775 8a267cb19fd2fc8f8a24ca576d36e2d6 791 PRINTS PR00723 Subtilisin serine protease family (S8) signature 142 161 2.4E-15 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related M892_26775 8a267cb19fd2fc8f8a24ca576d36e2d6 791 PRINTS PR00723 Subtilisin serine protease family (S8) signature 182 195 2.4E-15 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related M892_26775 8a267cb19fd2fc8f8a24ca576d36e2d6 791 PRINTS PR00723 Subtilisin serine protease family (S8) signature 487 503 2.4E-15 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related M892_26775 8a267cb19fd2fc8f8a24ca576d36e2d6 791 SUPERFAMILY SSF52743 123 549 7.79E-100 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 M892_26775 8a267cb19fd2fc8f8a24ca576d36e2d6 791 Pfam PF00082 Subtilase family 478 538 1.1E-13 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 M892_26775 8a267cb19fd2fc8f8a24ca576d36e2d6 791 Gene3D G3DSA:2.60.120.380 564 665 3.1E-33 T 12-10-2018 M892_19345 d4038578ac5cdcf83722b6b216f9e2ab 430 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 61 74 3.0E-6 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M892_19345 d4038578ac5cdcf83722b6b216f9e2ab 430 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 187 200 3.0E-6 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M892_19345 d4038578ac5cdcf83722b6b216f9e2ab 430 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 129 147 3.0E-6 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M892_19345 d4038578ac5cdcf83722b6b216f9e2ab 430 SUPERFAMILY SSF56672 15 360 1.0E-50 T 12-10-2018 M892_19345 d4038578ac5cdcf83722b6b216f9e2ab 430 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 66 272 5.0E-42 T 12-10-2018 IPR000477 Reverse transcriptase domain M892_19345 d4038578ac5cdcf83722b6b216f9e2ab 430 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 8 350 5.0E-118 T 12-10-2018 IPR030931 Group II intron reverse transcriptase/maturase M892_19345 d4038578ac5cdcf83722b6b216f9e2ab 430 Pfam PF08388 Group II intron, maturase-specific domain 288 356 1.6E-14 T 12-10-2018 IPR013597 Group II intron, maturase-specific M892_00260 d4038578ac5cdcf83722b6b216f9e2ab 430 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 61 74 3.0E-6 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M892_00260 d4038578ac5cdcf83722b6b216f9e2ab 430 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 187 200 3.0E-6 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M892_00260 d4038578ac5cdcf83722b6b216f9e2ab 430 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 129 147 3.0E-6 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M892_00260 d4038578ac5cdcf83722b6b216f9e2ab 430 SUPERFAMILY SSF56672 15 360 1.0E-50 T 12-10-2018 M892_00260 d4038578ac5cdcf83722b6b216f9e2ab 430 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 66 272 5.0E-42 T 12-10-2018 IPR000477 Reverse transcriptase domain M892_00260 d4038578ac5cdcf83722b6b216f9e2ab 430 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 8 350 5.0E-118 T 12-10-2018 IPR030931 Group II intron reverse transcriptase/maturase M892_00260 d4038578ac5cdcf83722b6b216f9e2ab 430 Pfam PF08388 Group II intron, maturase-specific domain 288 356 1.6E-14 T 12-10-2018 IPR013597 Group II intron, maturase-specific M892_02460 61f9f457574ab95c3c30cd4593259f97 154 Gene3D G3DSA:1.10.357.10 1 152 1.6E-44 T 12-10-2018 M892_02460 61f9f457574ab95c3c30cd4593259f97 154 SUPERFAMILY SSF46689 1 74 1.59E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_02460 61f9f457574ab95c3c30cd4593259f97 154 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 58 1.9E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M892_16300 1f325825808caeb693f99b69df0cf841 319 PIRSF PIRSF006621 1 317 4.5E-74 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 M892_16300 1f325825808caeb693f99b69df0cf841 319 SUPERFAMILY SSF51395 1 313 1.7E-73 T 12-10-2018 M892_16300 1f325825808caeb693f99b69df0cf841 319 Gene3D G3DSA:1.20.225.30 243 314 8.3E-27 T 12-10-2018 M892_16300 1f325825808caeb693f99b69df0cf841 319 Gene3D G3DSA:3.20.20.70 1 242 1.5E-80 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M892_16300 1f325825808caeb693f99b69df0cf841 319 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 12-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 M892_16300 1f325825808caeb693f99b69df0cf841 319 Pfam PF01207 Dihydrouridine synthase (Dus) 5 295 2.2E-78 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 M892_16300 1f325825808caeb693f99b69df0cf841 319 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 310 52.871 T 12-10-2018 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 M892_12500 de66f1d4258f9b2f57a62172bdb45755 279 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 252 2.1E-67 T 12-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 M892_12500 de66f1d4258f9b2f57a62172bdb45755 279 TIGRFAM TIGR00571 dam: DNA adenine methylase 5 268 2.8E-94 T 12-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 M892_12500 de66f1d4258f9b2f57a62172bdb45755 279 SUPERFAMILY SSF53335 5 268 9.69E-76 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M892_12500 de66f1d4258f9b2f57a62172bdb45755 279 Gene3D G3DSA:1.10.1020.10 57 156 2.1E-83 T 12-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 M892_12500 de66f1d4258f9b2f57a62172bdb45755 279 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 178 184 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 M892_12500 de66f1d4258f9b2f57a62172bdb45755 279 PIRSF PIRSF000398 1 274 5.6E-73 T 12-10-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 M892_12500 de66f1d4258f9b2f57a62172bdb45755 279 Gene3D G3DSA:3.40.50.150 7 239 2.1E-83 T 12-10-2018 M892_12500 de66f1d4258f9b2f57a62172bdb45755 279 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 3.9E-18 T 12-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 M892_12500 de66f1d4258f9b2f57a62172bdb45755 279 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 3.9E-18 T 12-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 M892_12500 de66f1d4258f9b2f57a62172bdb45755 279 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 175 187 3.9E-18 T 12-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 M892_12500 de66f1d4258f9b2f57a62172bdb45755 279 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 3.9E-18 T 12-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 M892_20325 c18e432c58d3bb0902aedb001b96845a 207 PIRSF PIRSF006324 1 206 6.0E-51 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 M892_20325 c18e432c58d3bb0902aedb001b96845a 207 Pfam PF01810 LysE type translocator 15 202 8.6E-31 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 M892_06280 7a1fca423ab9e0d8461a7e8e7428343f 341 Pfam PF01548 Transposase 8 142 5.7E-15 T 12-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 M892_06280 7a1fca423ab9e0d8461a7e8e7428343f 341 Pfam PF02371 Transposase IS116/IS110/IS902 family 212 289 2.1E-15 T 12-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 M892_02285 ba0e4d4c5878f737a6c2eaae67e2fca1 512 Gene3D G3DSA:3.30.70.270 345 507 4.0E-38 T 12-10-2018 M892_02285 ba0e4d4c5878f737a6c2eaae67e2fca1 512 SUPERFAMILY SSF103190 117 179 2.75E-5 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily M892_02285 ba0e4d4c5878f737a6c2eaae67e2fca1 512 SUPERFAMILY SSF55073 347 501 1.1E-36 T 12-10-2018 IPR029787 Nucleotide cyclase M892_02285 ba0e4d4c5878f737a6c2eaae67e2fca1 512 Pfam PF02743 Cache domain 59 265 3.4E-15 T 12-10-2018 IPR033479 Double Cache domain 1 M892_02285 ba0e4d4c5878f737a6c2eaae67e2fca1 512 Gene3D G3DSA:3.30.450.20 84 171 5.1E-11 T 12-10-2018 M892_02285 ba0e4d4c5878f737a6c2eaae67e2fca1 512 SMART SM00267 327 500 9.0E-35 T 12-10-2018 IPR000160 GGDEF domain M892_02285 ba0e4d4c5878f737a6c2eaae67e2fca1 512 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 363 498 2.6E-30 T 12-10-2018 IPR000160 GGDEF domain M892_02285 ba0e4d4c5878f737a6c2eaae67e2fca1 512 Pfam PF00990 Diguanylate cyclase, GGDEF domain 348 495 3.2E-30 T 12-10-2018 IPR000160 GGDEF domain M892_25515 803021b443fd66fbdfeb79220bfd76a0 650 Gene3D G3DSA:3.30.450.20 162 295 2.0E-17 T 12-10-2018 M892_25515 803021b443fd66fbdfeb79220bfd76a0 650 Gene3D G3DSA:1.10.287.950 318 650 2.1E-77 T 12-10-2018 M892_25515 803021b443fd66fbdfeb79220bfd76a0 650 SMART SM00283 388 649 8.2E-85 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M892_25515 803021b443fd66fbdfeb79220bfd76a0 650 SMART SM00304 319 373 7.9E-12 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M892_25515 803021b443fd66fbdfeb79220bfd76a0 650 Pfam PF00672 HAMP domain 320 369 7.6E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M892_25515 803021b443fd66fbdfeb79220bfd76a0 650 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 433 616 1.5E-42 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M892_25515 803021b443fd66fbdfeb79220bfd76a0 650 SUPERFAMILY SSF58104 341 650 3.53E-78 T 12-10-2018 M892_13980 a806bac85593a53f72581c10bd19d2a9 1128 PRINTS PR00344 Bacterial sensor protein C-terminal signature 668 681 2.1E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_13980 a806bac85593a53f72581c10bd19d2a9 1128 PRINTS PR00344 Bacterial sensor protein C-terminal signature 644 662 2.1E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_13980 a806bac85593a53f72581c10bd19d2a9 1128 PRINTS PR00344 Bacterial sensor protein C-terminal signature 609 623 2.1E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_13980 a806bac85593a53f72581c10bd19d2a9 1128 PRINTS PR00344 Bacterial sensor protein C-terminal signature 627 637 2.1E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_13980 a806bac85593a53f72581c10bd19d2a9 1128 Gene3D G3DSA:1.10.8.500 376 426 5.8E-16 T 12-10-2018 M892_13980 a806bac85593a53f72581c10bd19d2a9 1128 SUPERFAMILY SSF158472 378 429 1.27E-10 T 12-10-2018 M892_13980 a806bac85593a53f72581c10bd19d2a9 1128 SMART SM00448 722 835 4.6E-44 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_13980 a806bac85593a53f72581c10bd19d2a9 1128 Gene3D G3DSA:3.30.450.20 266 358 2.9E-9 T 12-10-2018 M892_13980 a806bac85593a53f72581c10bd19d2a9 1128 SUPERFAMILY SSF55785 860 927 9.77E-9 T 12-10-2018 IPR035965 PAS domain superfamily M892_13980 a806bac85593a53f72581c10bd19d2a9 1128 Pfam PF00512 His Kinase A (phospho-acceptor) domain 460 525 2.2E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M892_13980 a806bac85593a53f72581c10bd19d2a9 1128 SMART SM00304 377 430 1.3E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M892_13980 a806bac85593a53f72581c10bd19d2a9 1128 Gene3D G3DSA:3.30.450.20 863 953 3.8E-8 T 12-10-2018 M892_13980 a806bac85593a53f72581c10bd19d2a9 1128 Pfam PF00672 HAMP domain 379 427 1.2E-11 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M892_13980 a806bac85593a53f72581c10bd19d2a9 1128 Pfam PF13188 PAS domain 879 918 1.4E-4 T 12-10-2018 IPR000014 PAS domain M892_13980 a806bac85593a53f72581c10bd19d2a9 1128 Gene3D G3DSA:1.10.287.130 427 525 4.3E-22 T 12-10-2018 M892_13980 a806bac85593a53f72581c10bd19d2a9 1128 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 574 683 1.3E-28 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_13980 a806bac85593a53f72581c10bd19d2a9 1128 SMART SM00388 459 527 6.7E-18 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M892_13980 a806bac85593a53f72581c10bd19d2a9 1128 SUPERFAMILY SSF55874 516 686 3.27E-46 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_13980 a806bac85593a53f72581c10bd19d2a9 1128 Gene3D G3DSA:3.40.50.2300 723 862 7.7E-40 T 12-10-2018 M892_13980 a806bac85593a53f72581c10bd19d2a9 1128 SUPERFAMILY SSF47384 446 527 1.96E-18 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M892_13980 a806bac85593a53f72581c10bd19d2a9 1128 SMART SM00387 573 684 4.2E-39 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_13980 a806bac85593a53f72581c10bd19d2a9 1128 SMART SM00091 873 938 9.2E-6 T 12-10-2018 IPR000014 PAS domain M892_13980 a806bac85593a53f72581c10bd19d2a9 1128 SUPERFAMILY SSF52172 718 845 8.4E-41 T 12-10-2018 IPR011006 CheY-like superfamily M892_13980 a806bac85593a53f72581c10bd19d2a9 1128 Gene3D G3DSA:3.30.565.10 526 689 3.6E-45 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_13980 a806bac85593a53f72581c10bd19d2a9 1128 Pfam PF00072 Response regulator receiver domain 726 836 1.6E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_17160 16b43427d68fb8fde5a1dbeea3cc744c 963 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 533 892 1.7E-61 T 12-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 M892_17160 16b43427d68fb8fde5a1dbeea3cc744c 963 Gene3D G3DSA:3.40.640.10 87 355 2.5E-130 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M892_17160 16b43427d68fb8fde5a1dbeea3cc744c 963 Gene3D G3DSA:3.90.1150.10 38 461 2.5E-130 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M892_17160 16b43427d68fb8fde5a1dbeea3cc744c 963 Pfam PF00202 Aminotransferase class-III 51 464 6.4E-94 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 M892_17160 16b43427d68fb8fde5a1dbeea3cc744c 963 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 34 466 1.7E-158 T 12-10-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 M892_17160 16b43427d68fb8fde5a1dbeea3cc744c 963 Gene3D G3DSA:3.90.1150.10 561 952 4.8E-140 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M892_17160 16b43427d68fb8fde5a1dbeea3cc744c 963 Gene3D G3DSA:3.40.640.10 575 843 4.8E-140 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M892_17160 16b43427d68fb8fde5a1dbeea3cc744c 963 Gene3D G3DSA:1.20.1650.10 463 560 3.0E-45 T 12-10-2018 M892_17160 16b43427d68fb8fde5a1dbeea3cc744c 963 SUPERFAMILY SSF53383 500 957 4.08E-112 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M892_17160 16b43427d68fb8fde5a1dbeea3cc744c 963 SUPERFAMILY SSF53383 42 464 2.58E-112 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M892_07110 7d000d8d559627996a47b4c1fc2e1969 217 PIRSF PIRSF000498 1 211 2.4E-79 T 12-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 M892_07110 7d000d8d559627996a47b4c1fc2e1969 217 Gene3D G3DSA:2.40.30.20 102 206 1.5E-35 T 12-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M892_07110 7d000d8d559627996a47b4c1fc2e1969 217 Pfam PF00677 Lumazine binding domain 100 184 9.0E-24 T 12-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 M892_07110 7d000d8d559627996a47b4c1fc2e1969 217 Pfam PF00677 Lumazine binding domain 3 87 4.5E-21 T 12-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 M892_07110 7d000d8d559627996a47b4c1fc2e1969 217 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 202 1.8E-66 T 12-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 M892_07110 7d000d8d559627996a47b4c1fc2e1969 217 SUPERFAMILY SSF63380 93 197 3.66E-33 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel M892_07110 7d000d8d559627996a47b4c1fc2e1969 217 Gene3D G3DSA:2.40.30.20 1 89 9.1E-28 T 12-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M892_07110 7d000d8d559627996a47b4c1fc2e1969 217 SUPERFAMILY SSF63380 1 89 1.53E-25 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel M892_17200 2ea81fea41c4496b99102320963ad96b 377 Pfam PF00268 Ribonucleotide reductase, small chain 34 333 3.9E-49 T 12-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 M892_17200 2ea81fea41c4496b99102320963ad96b 377 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 115 131 - T 12-10-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 M892_17200 2ea81fea41c4496b99102320963ad96b 377 SUPERFAMILY SSF47240 3 341 1.66E-111 T 12-10-2018 IPR009078 Ferritin-like superfamily M892_17200 2ea81fea41c4496b99102320963ad96b 377 Gene3D G3DSA:1.10.620.20 2 341 1.6E-143 T 12-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 M892_24585 94cfcb1e9ffe934e154acce9823d91fd 160 SUPERFAMILY SSF46785 5 100 1.47E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_24585 94cfcb1e9ffe934e154acce9823d91fd 160 Pfam PF01037 Lrp/AsnC ligand binding domain 76 149 3.8E-21 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain M892_24585 94cfcb1e9ffe934e154acce9823d91fd 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 10 26 5.4E-15 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 M892_24585 94cfcb1e9ffe934e154acce9823d91fd 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 26 37 5.4E-15 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 M892_24585 94cfcb1e9ffe934e154acce9823d91fd 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 37 56 5.4E-15 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 M892_24585 94cfcb1e9ffe934e154acce9823d91fd 160 SUPERFAMILY SSF54909 72 157 2.68E-21 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel M892_24585 94cfcb1e9ffe934e154acce9823d91fd 160 Gene3D G3DSA:3.30.70.920 62 155 7.3E-24 T 12-10-2018 M892_24585 94cfcb1e9ffe934e154acce9823d91fd 160 ProSitePatterns PS00519 AsnC-type HTH domain signature. 28 54 - T 12-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site M892_24585 94cfcb1e9ffe934e154acce9823d91fd 160 Gene3D G3DSA:1.10.10.10 4 61 1.0E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_24585 94cfcb1e9ffe934e154acce9823d91fd 160 SMART SM00344 10 119 8.1E-45 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 M892_24585 94cfcb1e9ffe934e154acce9823d91fd 160 Pfam PF13412 Winged helix-turn-helix DNA-binding 10 56 3.5E-18 T 12-10-2018 M892_25765 887970f7e8aa53701229ee8771359e18 543 SUPERFAMILY SSF52540 295 526 6.17E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_25765 887970f7e8aa53701229ee8771359e18 543 SMART SM00382 35 235 4.0E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_25765 887970f7e8aa53701229ee8771359e18 543 SMART SM00382 312 504 2.3E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_25765 887970f7e8aa53701229ee8771359e18 543 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 263 2.5E-5 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 M892_25765 887970f7e8aa53701229ee8771359e18 543 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 506 537 0.0015 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 M892_25765 887970f7e8aa53701229ee8771359e18 543 Pfam PF00005 ABC transporter 304 455 5.5E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_25765 887970f7e8aa53701229ee8771359e18 543 Gene3D G3DSA:3.40.50.300 4 278 2.2E-81 T 12-10-2018 M892_25765 887970f7e8aa53701229ee8771359e18 543 Gene3D G3DSA:3.40.50.300 279 543 2.6E-86 T 12-10-2018 M892_25765 887970f7e8aa53701229ee8771359e18 543 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_25765 887970f7e8aa53701229ee8771359e18 543 ProSitePatterns PS00211 ABC transporters family signature. 427 441 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_25765 887970f7e8aa53701229ee8771359e18 543 SUPERFAMILY SSF52540 6 256 2.32E-67 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_25765 887970f7e8aa53701229ee8771359e18 543 Pfam PF00005 ABC transporter 26 185 5.1E-26 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_26760 b578149a6d189a55f5d95c8d42d68b82 459 Gene3D G3DSA:3.90.1150.10 61 444 2.2E-118 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M892_26760 b578149a6d189a55f5d95c8d42d68b82 459 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 265 302 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 M892_26760 b578149a6d189a55f5d95c8d42d68b82 459 Pfam PF00202 Aminotransferase class-III 57 449 2.5E-86 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 M892_26760 b578149a6d189a55f5d95c8d42d68b82 459 Gene3D G3DSA:3.40.640.10 89 348 2.2E-118 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M892_26760 b578149a6d189a55f5d95c8d42d68b82 459 PIRSF PIRSF000521 7 156 2.0E-6 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 M892_26760 b578149a6d189a55f5d95c8d42d68b82 459 PIRSF PIRSF000521 150 452 1.2E-19 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 M892_26760 b578149a6d189a55f5d95c8d42d68b82 459 SUPERFAMILY SSF53383 57 450 3.46E-106 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M892_01500 bb34aa2fb6274021c56aeac801078cc7 655 SMART SM00267 466 638 4.2E-31 T 12-10-2018 IPR000160 GGDEF domain M892_01500 bb34aa2fb6274021c56aeac801078cc7 655 SMART SM00028 210 243 11.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_01500 bb34aa2fb6274021c56aeac801078cc7 655 SMART SM00028 250 283 0.95 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_01500 bb34aa2fb6274021c56aeac801078cc7 655 SMART SM00028 370 403 290.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_01500 bb34aa2fb6274021c56aeac801078cc7 655 SMART SM00028 92 125 120.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_01500 bb34aa2fb6274021c56aeac801078cc7 655 SMART SM00028 330 363 66.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_01500 bb34aa2fb6274021c56aeac801078cc7 655 SMART SM00028 290 323 0.049 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_01500 bb34aa2fb6274021c56aeac801078cc7 655 SUPERFAMILY SSF48452 84 236 2.4E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_01500 bb34aa2fb6274021c56aeac801078cc7 655 SUPERFAMILY SSF55073 482 636 2.9E-33 T 12-10-2018 IPR029787 Nucleotide cyclase M892_01500 bb34aa2fb6274021c56aeac801078cc7 655 Gene3D G3DSA:1.25.40.10 238 313 1.1E-11 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_01500 bb34aa2fb6274021c56aeac801078cc7 655 Pfam PF13424 Tetratricopeptide repeat 212 280 5.3E-8 T 12-10-2018 M892_01500 bb34aa2fb6274021c56aeac801078cc7 655 Pfam PF13181 Tetratricopeptide repeat 293 319 0.0082 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_01500 bb34aa2fb6274021c56aeac801078cc7 655 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 477 635 4.1E-34 T 12-10-2018 IPR000160 GGDEF domain M892_01500 bb34aa2fb6274021c56aeac801078cc7 655 Gene3D G3DSA:1.25.40.10 314 458 8.5E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_01500 bb34aa2fb6274021c56aeac801078cc7 655 Gene3D G3DSA:1.25.40.10 9 237 4.8E-12 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_01500 bb34aa2fb6274021c56aeac801078cc7 655 SUPERFAMILY SSF48452 212 400 1.9E-20 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_01500 bb34aa2fb6274021c56aeac801078cc7 655 Pfam PF00990 Diguanylate cyclase, GGDEF domain 478 633 1.4E-31 T 12-10-2018 IPR000160 GGDEF domain M892_01500 bb34aa2fb6274021c56aeac801078cc7 655 Gene3D G3DSA:3.30.70.270 479 641 3.5E-37 T 12-10-2018 M892_23825 714d8079b8b8712b47226bb1535c35f4 554 Gene3D G3DSA:3.50.50.60 8 387 3.1E-182 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_23825 714d8079b8b8712b47226bb1535c35f4 554 Pfam PF13450 NAD(P)-binding Rossmann-like domain 13 59 4.6E-7 T 12-10-2018 M892_23825 714d8079b8b8712b47226bb1535c35f4 554 SUPERFAMILY SSF51905 2 453 5.5E-54 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_23825 714d8079b8b8712b47226bb1535c35f4 554 Gene3D G3DSA:3.30.9.90 81 455 3.1E-182 T 12-10-2018 M892_23825 714d8079b8b8712b47226bb1535c35f4 554 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 451 552 5.7E-47 T 12-10-2018 M892_23825 714d8079b8b8712b47226bb1535c35f4 554 Gene3D G3DSA:3.30.70.20 456 549 5.9E-36 T 12-10-2018 M892_23825 714d8079b8b8712b47226bb1535c35f4 554 SUPERFAMILY SSF54862 455 554 4.19E-26 T 12-10-2018 M892_23825 714d8079b8b8712b47226bb1535c35f4 554 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 182 197 2.1E-6 T 12-10-2018 M892_23825 714d8079b8b8712b47226bb1535c35f4 554 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 10 32 2.1E-6 T 12-10-2018 M892_23825 714d8079b8b8712b47226bb1535c35f4 554 SUPERFAMILY SSF54373 214 311 2.67E-32 T 12-10-2018 M892_12215 8b5fc60a282d618578e09c0bed2e9715 403 Gene3D G3DSA:3.40.640.10 59 304 2.7E-151 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M892_12215 8b5fc60a282d618578e09c0bed2e9715 403 Gene3D G3DSA:3.90.1150.10 25 392 2.7E-151 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M892_12215 8b5fc60a282d618578e09c0bed2e9715 403 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 7 403 4.6E-207 T 12-10-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 M892_12215 8b5fc60a282d618578e09c0bed2e9715 403 SUPERFAMILY SSF53383 16 399 4.03E-131 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M892_12215 8b5fc60a282d618578e09c0bed2e9715 403 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 222 259 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 M892_12215 8b5fc60a282d618578e09c0bed2e9715 403 PIRSF PIRSF000521 172 402 4.0E-37 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 M892_12215 8b5fc60a282d618578e09c0bed2e9715 403 PIRSF PIRSF000521 25 155 6.9E-7 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 M892_12215 8b5fc60a282d618578e09c0bed2e9715 403 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 15 402 70.54 T 12-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 M892_12215 8b5fc60a282d618578e09c0bed2e9715 403 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 16 399 1.5E-149 T 12-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 M892_12215 8b5fc60a282d618578e09c0bed2e9715 403 Pfam PF00202 Aminotransferase class-III 22 399 8.2E-128 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 M892_05395 427b17876514f6240a187751ad79a6f2 246 ProSitePatterns PS01087 Radical activating enzymes signature. 18 39 - T 12-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 M892_05395 427b17876514f6240a187751ad79a6f2 246 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 6 239 1.0E-106 T 12-10-2018 IPR012838 Pyruvate formate-lyase 1 activating enzyme GO:0043365|GO:0055114 M892_05395 427b17876514f6240a187751ad79a6f2 246 Gene3D G3DSA:3.20.20.70 2 246 1.1E-104 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M892_05395 427b17876514f6240a187751ad79a6f2 246 Pfam PF04055 Radical SAM superfamily 24 178 1.6E-33 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 M892_05395 427b17876514f6240a187751ad79a6f2 246 PIRSF PIRSF000371 1 48 2.0E-11 T 12-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 M892_05395 427b17876514f6240a187751ad79a6f2 246 PIRSF PIRSF000371 44 245 6.9E-45 T 12-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 M892_05395 427b17876514f6240a187751ad79a6f2 246 SUPERFAMILY SSF102114 23 218 3.34E-30 T 12-10-2018 M892_05395 427b17876514f6240a187751ad79a6f2 246 Pfam PF13353 4Fe-4S single cluster domain 16 150 2.5E-21 T 12-10-2018 M892_25435 9c74944da1bc4715b40146ba7fb2dc8d 661 SUPERFAMILY SSF141868 406 646 4.58E-70 T 12-10-2018 IPR035919 EAL domain superfamily M892_25435 9c74944da1bc4715b40146ba7fb2dc8d 661 Pfam PF02378 Phosphotransferase system, EIIC 88 295 6.7E-19 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 M892_25435 9c74944da1bc4715b40146ba7fb2dc8d 661 SMART SM00052 399 641 2.1E-68 T 12-10-2018 IPR001633 EAL domain M892_25435 9c74944da1bc4715b40146ba7fb2dc8d 661 Pfam PF00563 EAL domain 407 636 3.3E-60 T 12-10-2018 IPR001633 EAL domain M892_25435 9c74944da1bc4715b40146ba7fb2dc8d 661 Gene3D G3DSA:3.20.20.450 403 659 1.1E-71 T 12-10-2018 IPR035919 EAL domain superfamily M892_06570 7cc6ee98b8dac545def4101c76f82330 249 Pfam PF00460 Flagella basal body rod protein 8 35 2.0E-5 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 M892_06570 7cc6ee98b8dac545def4101c76f82330 249 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 121 7.9E-33 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G M892_06570 7cc6ee98b8dac545def4101c76f82330 249 SUPERFAMILY SSF117143 77 207 5.36E-16 T 12-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like M892_06570 7cc6ee98b8dac545def4101c76f82330 249 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 172 242 1.1E-21 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain M892_08360 d0d5fb93c7499d60d913ba52de3c766f 415 Gene3D G3DSA:3.30.1330.20 221 327 1.0E-34 T 12-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 M892_08360 d0d5fb93c7499d60d913ba52de3c766f 415 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 12-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 M892_08360 d0d5fb93c7499d60d913ba52de3c766f 415 Pfam PF12327 FtsZ family, C-terminal domain 222 316 2.1E-36 T 12-10-2018 IPR024757 Cell division protein FtsZ, C-terminal M892_08360 d0d5fb93c7499d60d913ba52de3c766f 415 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 173 1.7E-39 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 M892_08360 d0d5fb93c7499d60d913ba52de3c766f 415 SUPERFAMILY SSF52490 13 208 2.49E-69 T 12-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 M892_08360 d0d5fb93c7499d60d913ba52de3c766f 415 SMART SM00864 13 205 3.6E-112 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 M892_08360 d0d5fb93c7499d60d913ba52de3c766f 415 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 402 38.143 T 12-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 M892_08360 d0d5fb93c7499d60d913ba52de3c766f 415 SUPERFAMILY SSF55307 204 320 6.87E-43 T 12-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 M892_08360 d0d5fb93c7499d60d913ba52de3c766f 415 Gene3D G3DSA:3.40.50.1440 5 220 5.7E-80 T 12-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 M892_08360 d0d5fb93c7499d60d913ba52de3c766f 415 PRINTS PR00423 Cell division protein FtsZ signature 189 211 6.4E-52 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 M892_08360 d0d5fb93c7499d60d913ba52de3c766f 415 PRINTS PR00423 Cell division protein FtsZ signature 126 147 6.4E-52 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 M892_08360 d0d5fb93c7499d60d913ba52de3c766f 415 PRINTS PR00423 Cell division protein FtsZ signature 212 233 6.4E-52 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 M892_08360 d0d5fb93c7499d60d913ba52de3c766f 415 PRINTS PR00423 Cell division protein FtsZ signature 98 118 6.4E-52 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 M892_08360 d0d5fb93c7499d60d913ba52de3c766f 415 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 7 328 3.8E-136 T 12-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 M892_08360 d0d5fb93c7499d60d913ba52de3c766f 415 SMART SM00865 207 325 1.9E-56 T 12-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 M892_08360 d0d5fb93c7499d60d913ba52de3c766f 415 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 12-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 M892_25810 b70939f565f463f490fee4b8f9cbb28e 241 Pfam PF00194 Eukaryotic-type carbonic anhydrase 24 239 2.0E-53 T 12-10-2018 IPR001148 Alpha carbonic anhydrase domain M892_25810 b70939f565f463f490fee4b8f9cbb28e 241 SMART SM01057 25 241 1.3E-98 T 12-10-2018 IPR001148 Alpha carbonic anhydrase domain M892_25810 b70939f565f463f490fee4b8f9cbb28e 241 SUPERFAMILY SSF51069 24 238 3.01E-75 T 12-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily M892_25810 b70939f565f463f490fee4b8f9cbb28e 241 ProSitePatterns PS00162 Alpha-carbonic anhydrases signature. 111 127 - T 12-10-2018 IPR018338 Carbonic anhydrase, alpha-class, conserved site GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117|Reactome: R-HSA-1475029 M892_25810 b70939f565f463f490fee4b8f9cbb28e 241 Gene3D G3DSA:3.10.200.10 24 239 1.3E-85 T 12-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily M892_14070 2cb9d55d71829de7a3e2096e34916d67 276 Pfam PF00809 Pterin binding enzyme 18 257 1.2E-90 T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 M892_14070 2cb9d55d71829de7a3e2096e34916d67 276 SUPERFAMILY SSF51717 4 273 6.02E-105 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 M892_14070 2cb9d55d71829de7a3e2096e34916d67 276 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 17 32 - T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 M892_14070 2cb9d55d71829de7a3e2096e34916d67 276 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 17 271 3.6E-102 T 12-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 M892_14070 2cb9d55d71829de7a3e2096e34916d67 276 Gene3D G3DSA:3.20.20.20 1 276 5.6E-111 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 M892_14070 2cb9d55d71829de7a3e2096e34916d67 276 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 51 64 - T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 M892_13515 26e5d2ce7ccfe8accef4a93cb3e2e9ce 307 Pfam PF01476 LysM domain 49 91 5.6E-12 T 12-10-2018 IPR018392 LysM domain M892_13515 26e5d2ce7ccfe8accef4a93cb3e2e9ce 307 SMART SM00257 48 92 5.4E-11 T 12-10-2018 IPR018392 LysM domain M892_13515 26e5d2ce7ccfe8accef4a93cb3e2e9ce 307 Gene3D G3DSA:2.70.70.10 143 307 1.4E-37 T 12-10-2018 IPR011055 Duplicated hybrid motif M892_13515 26e5d2ce7ccfe8accef4a93cb3e2e9ce 307 Pfam PF01551 Peptidase family M23 208 302 1.4E-31 T 12-10-2018 IPR016047 Peptidase M23 M892_13515 26e5d2ce7ccfe8accef4a93cb3e2e9ce 307 SUPERFAMILY SSF51261 48 306 1.15E-51 T 12-10-2018 IPR011055 Duplicated hybrid motif M892_13515 26e5d2ce7ccfe8accef4a93cb3e2e9ce 307 Gene3D G3DSA:3.10.350.10 35 100 1.3E-11 T 12-10-2018 IPR036779 LysM domain superfamily M892_03630 0cb55efc7d693e4cd323e3c8d65f80d7 458 Pfam PF04317 YcjX-like family, DUF463 20 457 7.2E-188 T 12-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein M892_03630 0cb55efc7d693e4cd323e3c8d65f80d7 458 PIRSF PIRSF019381 1 458 3.5E-199 T 12-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein M892_05165 daea50e4b0aaf0f3292bbd28a7ca80f9 501 Pfam PF14400 Inactive transglutaminase fused to 7 transmembrane helices 24 183 5.5E-59 T 12-10-2018 IPR025838 Inactive transglutaminase fused to 7 transmembrane helices M892_05165 daea50e4b0aaf0f3292bbd28a7ca80f9 501 Pfam PF14402 7 transmembrane helices usually fused to an inactive transglutaminase 255 498 1.8E-108 T 12-10-2018 IPR025840 7 transmembrane helices usually fused to an inactive transglutaminase M892_28705 33f9ad1c3c586645626e78ce4c7f17cc 356 Gene3D G3DSA:1.10.10.2830 179 298 1.7E-33 T 12-10-2018 M892_28705 33f9ad1c3c586645626e78ce4c7f17cc 356 Pfam PF13412 Winged helix-turn-helix DNA-binding 195 220 2.2E-5 T 12-10-2018 M892_28705 33f9ad1c3c586645626e78ce4c7f17cc 356 Pfam PF08775 ParB family 232 354 3.3E-32 T 12-10-2018 IPR014884 ParB protein family, C-terminal M892_28705 33f9ad1c3c586645626e78ce4c7f17cc 356 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 96 259 6.8E-19 T 12-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 M892_04755 705b217309fc88fe241b516926c2752c 385 SUPERFAMILY SSF53098 8 372 1.74E-54 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_04755 705b217309fc88fe241b516926c2752c 385 Pfam PF01609 Transposase DDE domain 130 293 1.2E-15 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_21675 705b217309fc88fe241b516926c2752c 385 SUPERFAMILY SSF53098 8 372 1.74E-54 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_21675 705b217309fc88fe241b516926c2752c 385 Pfam PF01609 Transposase DDE domain 130 293 1.2E-15 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_15515 705b217309fc88fe241b516926c2752c 385 SUPERFAMILY SSF53098 8 372 1.74E-54 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_15515 705b217309fc88fe241b516926c2752c 385 Pfam PF01609 Transposase DDE domain 130 293 1.2E-15 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_19930 705b217309fc88fe241b516926c2752c 385 SUPERFAMILY SSF53098 8 372 1.74E-54 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_19930 705b217309fc88fe241b516926c2752c 385 Pfam PF01609 Transposase DDE domain 130 293 1.2E-15 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_10060 705b217309fc88fe241b516926c2752c 385 SUPERFAMILY SSF53098 8 372 1.74E-54 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_10060 705b217309fc88fe241b516926c2752c 385 Pfam PF01609 Transposase DDE domain 130 293 1.2E-15 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_13825 705b217309fc88fe241b516926c2752c 385 SUPERFAMILY SSF53098 8 372 1.74E-54 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_13825 705b217309fc88fe241b516926c2752c 385 Pfam PF01609 Transposase DDE domain 130 293 1.2E-15 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_16085 705b217309fc88fe241b516926c2752c 385 SUPERFAMILY SSF53098 8 372 1.74E-54 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_16085 705b217309fc88fe241b516926c2752c 385 Pfam PF01609 Transposase DDE domain 130 293 1.2E-15 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_04750 705b217309fc88fe241b516926c2752c 385 SUPERFAMILY SSF53098 8 372 1.74E-54 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_04750 705b217309fc88fe241b516926c2752c 385 Pfam PF01609 Transposase DDE domain 130 293 1.2E-15 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_20430 705b217309fc88fe241b516926c2752c 385 SUPERFAMILY SSF53098 8 372 1.74E-54 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_20430 705b217309fc88fe241b516926c2752c 385 Pfam PF01609 Transposase DDE domain 130 293 1.2E-15 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_00880 705b217309fc88fe241b516926c2752c 385 SUPERFAMILY SSF53098 8 372 1.74E-54 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_00880 705b217309fc88fe241b516926c2752c 385 Pfam PF01609 Transposase DDE domain 130 293 1.2E-15 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_10075 705b217309fc88fe241b516926c2752c 385 SUPERFAMILY SSF53098 8 372 1.74E-54 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_10075 705b217309fc88fe241b516926c2752c 385 Pfam PF01609 Transposase DDE domain 130 293 1.2E-15 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_21545 705b217309fc88fe241b516926c2752c 385 SUPERFAMILY SSF53098 8 372 1.74E-54 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_21545 705b217309fc88fe241b516926c2752c 385 Pfam PF01609 Transposase DDE domain 130 293 1.2E-15 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_23535 705b217309fc88fe241b516926c2752c 385 SUPERFAMILY SSF53098 8 372 1.74E-54 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_23535 705b217309fc88fe241b516926c2752c 385 Pfam PF01609 Transposase DDE domain 130 293 1.2E-15 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_18630 705b217309fc88fe241b516926c2752c 385 SUPERFAMILY SSF53098 8 372 1.74E-54 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_18630 705b217309fc88fe241b516926c2752c 385 Pfam PF01609 Transposase DDE domain 130 293 1.2E-15 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_22275 705b217309fc88fe241b516926c2752c 385 SUPERFAMILY SSF53098 8 372 1.74E-54 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_22275 705b217309fc88fe241b516926c2752c 385 Pfam PF01609 Transposase DDE domain 130 293 1.2E-15 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_01030 705b217309fc88fe241b516926c2752c 385 SUPERFAMILY SSF53098 8 372 1.74E-54 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_01030 705b217309fc88fe241b516926c2752c 385 Pfam PF01609 Transposase DDE domain 130 293 1.2E-15 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_14495 705b217309fc88fe241b516926c2752c 385 SUPERFAMILY SSF53098 8 372 1.74E-54 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_14495 705b217309fc88fe241b516926c2752c 385 Pfam PF01609 Transposase DDE domain 130 293 1.2E-15 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_25825 705b217309fc88fe241b516926c2752c 385 SUPERFAMILY SSF53098 8 372 1.74E-54 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_25825 705b217309fc88fe241b516926c2752c 385 Pfam PF01609 Transposase DDE domain 130 293 1.2E-15 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_27875 705b217309fc88fe241b516926c2752c 385 SUPERFAMILY SSF53098 8 372 1.74E-54 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_27875 705b217309fc88fe241b516926c2752c 385 Pfam PF01609 Transposase DDE domain 130 293 1.2E-15 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_19435 705b217309fc88fe241b516926c2752c 385 SUPERFAMILY SSF53098 8 372 1.74E-54 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_19435 705b217309fc88fe241b516926c2752c 385 Pfam PF01609 Transposase DDE domain 130 293 1.2E-15 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_18115 705b217309fc88fe241b516926c2752c 385 SUPERFAMILY SSF53098 8 372 1.74E-54 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_18115 705b217309fc88fe241b516926c2752c 385 Pfam PF01609 Transposase DDE domain 130 293 1.2E-15 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_23755 705b217309fc88fe241b516926c2752c 385 SUPERFAMILY SSF53098 8 372 1.74E-54 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_23755 705b217309fc88fe241b516926c2752c 385 Pfam PF01609 Transposase DDE domain 130 293 1.2E-15 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_08680 705b217309fc88fe241b516926c2752c 385 SUPERFAMILY SSF53098 8 372 1.74E-54 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_08680 705b217309fc88fe241b516926c2752c 385 Pfam PF01609 Transposase DDE domain 130 293 1.2E-15 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_00115 705b217309fc88fe241b516926c2752c 385 SUPERFAMILY SSF53098 8 372 1.74E-54 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_00115 705b217309fc88fe241b516926c2752c 385 Pfam PF01609 Transposase DDE domain 130 293 1.2E-15 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_23580 705b217309fc88fe241b516926c2752c 385 SUPERFAMILY SSF53098 8 372 1.74E-54 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_23580 705b217309fc88fe241b516926c2752c 385 Pfam PF01609 Transposase DDE domain 130 293 1.2E-15 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_00700 705b217309fc88fe241b516926c2752c 385 SUPERFAMILY SSF53098 8 372 1.74E-54 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_00700 705b217309fc88fe241b516926c2752c 385 Pfam PF01609 Transposase DDE domain 130 293 1.2E-15 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_21000 705b217309fc88fe241b516926c2752c 385 SUPERFAMILY SSF53098 8 372 1.74E-54 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_21000 705b217309fc88fe241b516926c2752c 385 Pfam PF01609 Transposase DDE domain 130 293 1.2E-15 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_01375 705b217309fc88fe241b516926c2752c 385 SUPERFAMILY SSF53098 8 372 1.74E-54 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_01375 705b217309fc88fe241b516926c2752c 385 Pfam PF01609 Transposase DDE domain 130 293 1.2E-15 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_11875 705b217309fc88fe241b516926c2752c 385 SUPERFAMILY SSF53098 8 372 1.74E-54 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_11875 705b217309fc88fe241b516926c2752c 385 Pfam PF01609 Transposase DDE domain 130 293 1.2E-15 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_11260 c6d4cf7d865cfce13cc67b79960a45dc 206 Pfam PF07947 YhhN family 26 204 5.6E-31 T 12-10-2018 IPR012506 YhhN-like GO:0016021 M892_08355 d8e3afbd6fa6bba5df0d997c21e9129a 305 SUPERFAMILY SSF54211 134 278 2.58E-52 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold M892_08355 d8e3afbd6fa6bba5df0d997c21e9129a 305 Gene3D G3DSA:3.30.230.20 1 128 1.1E-51 T 12-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 M892_08355 d8e3afbd6fa6bba5df0d997c21e9129a 305 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 280 46.373 T 12-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 M892_08355 d8e3afbd6fa6bba5df0d997c21e9129a 305 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 298 9.2E-142 T 12-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 M892_08355 d8e3afbd6fa6bba5df0d997c21e9129a 305 SUPERFAMILY SSF54211 3 125 2.05E-42 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold M892_08355 d8e3afbd6fa6bba5df0d997c21e9129a 305 Gene3D G3DSA:3.30.1700.10 129 305 2.4E-70 T 12-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 M892_08355 d8e3afbd6fa6bba5df0d997c21e9129a 305 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 276 4.7E-108 T 12-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 M892_03870 9e1b2cd7ce1b44eca15ba68c1106601c 89 SUPERFAMILY SSF53098 5 88 2.88E-22 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_03870 9e1b2cd7ce1b44eca15ba68c1106601c 89 Gene3D G3DSA:1.10.740.10 1 88 9.0E-35 T 12-10-2018 IPR014737 Transposase, Tn5-like, C-terminal M892_03870 9e1b2cd7ce1b44eca15ba68c1106601c 89 Pfam PF02281 Transposase Tn5 dimerisation domain 7 84 1.7E-18 T 12-10-2018 IPR003201 Transposase Tn5, dimerisation M892_20205 c8f1af7be37df7d7ee8c0b4b768828e5 274 Pfam PF08282 haloacid dehalogenase-like hydrolase 20 95 2.8E-5 T 12-10-2018 M892_20205 c8f1af7be37df7d7ee8c0b4b768828e5 274 Gene3D G3DSA:3.40.50.1000 156 273 5.4E-6 T 12-10-2018 IPR023214 HAD superfamily M892_20205 c8f1af7be37df7d7ee8c0b4b768828e5 274 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 19 229 4.2E-14 T 12-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 M892_20205 c8f1af7be37df7d7ee8c0b4b768828e5 274 Gene3D G3DSA:3.40.50.1000 13 144 5.1E-8 T 12-10-2018 IPR023214 HAD superfamily M892_20205 c8f1af7be37df7d7ee8c0b4b768828e5 274 SUPERFAMILY SSF56784 13 258 3.28E-22 T 12-10-2018 IPR036412 HAD-like superfamily M892_00145 a6700e7b4eefb455542d1a92861371ab 412 SUPERFAMILY SSF53850 64 410 1.04E-39 T 12-10-2018 M892_00145 a6700e7b4eefb455542d1a92861371ab 412 Gene3D G3DSA:3.40.190.10 184 408 1.6E-16 T 12-10-2018 M892_00145 a6700e7b4eefb455542d1a92861371ab 412 Gene3D G3DSA:3.40.190.10 100 385 1.6E-16 T 12-10-2018 M892_00145 a6700e7b4eefb455542d1a92861371ab 412 PIRSF PIRSF029172 27 412 1.4E-173 T 12-10-2018 IPR027020 Protein ynjB M892_00145 a6700e7b4eefb455542d1a92861371ab 412 Pfam PF13416 Bacterial extracellular solute-binding protein 87 381 2.1E-21 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein M892_28745 2dd4f3666f8a61248ff2dc2eea21443d 347 Pfam PF13358 DDE superfamily endonuclease 169 312 1.2E-34 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_28745 2dd4f3666f8a61248ff2dc2eea21443d 347 SUPERFAMILY SSF53098 221 318 1.15E-7 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_28745 2dd4f3666f8a61248ff2dc2eea21443d 347 SUPERFAMILY SSF46689 16 131 5.97E-24 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_28745 2dd4f3666f8a61248ff2dc2eea21443d 347 Pfam PF13384 Homeodomain-like domain 28 67 9.1E-6 T 12-10-2018 M892_28745 2dd4f3666f8a61248ff2dc2eea21443d 347 Gene3D G3DSA:3.30.420.470 137 342 4.8E-12 T 12-10-2018 M892_28745 2dd4f3666f8a61248ff2dc2eea21443d 347 Pfam PF13592 Winged helix-turn helix 98 155 7.3E-20 T 12-10-2018 IPR025959 Winged helix-turn helix domain M892_27740 77dacb910204a267ebf1f60ae439aad6 164 Gene3D G3DSA:1.10.357.40 2 151 7.7E-56 T 12-10-2018 IPR037238 YbiA-like superfamily M892_27740 77dacb910204a267ebf1f60ae439aad6 164 TIGRFAM TIGR02464 ribofla_fusion: conserved hypothetical protein 5 144 3.8E-37 T 12-10-2018 IPR012816 NADAR M892_27740 77dacb910204a267ebf1f60ae439aad6 164 SUPERFAMILY SSF143990 4 145 1.16E-51 T 12-10-2018 IPR037238 YbiA-like superfamily M892_27740 77dacb910204a267ebf1f60ae439aad6 164 Pfam PF08719 Domain of unknown function (DUF1768) 7 145 1.4E-36 T 12-10-2018 IPR012816 NADAR M892_11855 441336a7ca4747094ae5387105183fff 468 SMART SM00387 355 465 1.9E-27 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_11855 441336a7ca4747094ae5387105183fff 468 SMART SM00388 249 311 6.2E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M892_11855 441336a7ca4747094ae5387105183fff 468 Pfam PF16527 Two-component sensor protein CpxA, periplasmic domain 41 173 2.4E-55 T 12-10-2018 IPR032404 Two-component sensor protein CpxA, periplasmic domain M892_11855 441336a7ca4747094ae5387105183fff 468 Gene3D G3DSA:3.30.450.210 36 162 1.2E-52 T 12-10-2018 IPR038515 CpxA, periplasmic domain superfamily M892_11855 441336a7ca4747094ae5387105183fff 468 SMART SM00304 195 248 8.0E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M892_11855 441336a7ca4747094ae5387105183fff 468 Gene3D G3DSA:3.30.565.10 314 464 4.4E-34 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_11855 441336a7ca4747094ae5387105183fff 468 Pfam PF00672 HAMP domain 196 243 1.1E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M892_11855 441336a7ca4747094ae5387105183fff 468 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 356 463 1.1E-17 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_11855 441336a7ca4747094ae5387105183fff 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 449 462 1.0E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_11855 441336a7ca4747094ae5387105183fff 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 404 1.0E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_11855 441336a7ca4747094ae5387105183fff 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 418 1.0E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_11855 441336a7ca4747094ae5387105183fff 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 425 443 1.0E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_11855 441336a7ca4747094ae5387105183fff 468 SUPERFAMILY SSF55874 301 463 5.11E-33 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_11855 441336a7ca4747094ae5387105183fff 468 Gene3D G3DSA:1.10.287.130 199 312 1.4E-33 T 12-10-2018 M892_11855 441336a7ca4747094ae5387105183fff 468 SUPERFAMILY SSF47384 235 310 3.14E-13 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M892_11855 441336a7ca4747094ae5387105183fff 468 Pfam PF00512 His Kinase A (phospho-acceptor) domain 251 309 8.7E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M892_01290 22ebe1e369254327e2325df4fc82b7f1 482 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 4 469 2.0E-232 T 12-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 M892_01290 22ebe1e369254327e2325df4fc82b7f1 482 PIRSF PIRSF000109 1 477 2.5E-239 T 12-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 M892_01290 22ebe1e369254327e2325df4fc82b7f1 482 Gene3D G3DSA:3.40.50.720 1 180 8.9E-56 T 12-10-2018 M892_01290 22ebe1e369254327e2325df4fc82b7f1 482 SUPERFAMILY SSF48179 177 472 7.48E-126 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 M892_01290 22ebe1e369254327e2325df4fc82b7f1 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 168 196 3.9E-85 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 M892_01290 22ebe1e369254327e2325df4fc82b7f1 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 249 276 3.9E-85 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 M892_01290 22ebe1e369254327e2325df4fc82b7f1 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 3.9E-85 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 M892_01290 22ebe1e369254327e2325df4fc82b7f1 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 3 26 3.9E-85 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 M892_01290 22ebe1e369254327e2325df4fc82b7f1 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 3.9E-85 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 M892_01290 22ebe1e369254327e2325df4fc82b7f1 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 356 378 3.9E-85 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 M892_01290 22ebe1e369254327e2325df4fc82b7f1 482 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 253 265 - T 12-10-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 M892_01290 22ebe1e369254327e2325df4fc82b7f1 482 Gene3D G3DSA:1.20.5.320 435 482 9.4E-25 T 12-10-2018 M892_01290 22ebe1e369254327e2325df4fc82b7f1 482 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 169 1.2E-50 T 12-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 M892_01290 22ebe1e369254327e2325df4fc82b7f1 482 SMART SM01350 179 469 1.0E-213 T 12-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 M892_01290 22ebe1e369254327e2325df4fc82b7f1 482 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 179 468 7.4E-126 T 12-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 M892_01290 22ebe1e369254327e2325df4fc82b7f1 482 SUPERFAMILY SSF51735 4 174 9.14E-56 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_01290 22ebe1e369254327e2325df4fc82b7f1 482 Gene3D G3DSA:1.10.1040.10 181 434 4.5E-102 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 M892_08495 e556ac42bfab087e53a0217eb082d7a0 455 SMART SM00228 374 447 1.0E-7 T 12-10-2018 IPR001478 PDZ domain GO:0005515 M892_08495 e556ac42bfab087e53a0217eb082d7a0 455 SMART SM00228 267 349 7.5E-17 T 12-10-2018 IPR001478 PDZ domain GO:0005515 M892_08495 e556ac42bfab087e53a0217eb082d7a0 455 SUPERFAMILY SSF50494 22 276 1.18E-63 T 12-10-2018 IPR009003 Peptidase S1, PA clan M892_08495 e556ac42bfab087e53a0217eb082d7a0 455 Gene3D G3DSA:2.40.10.120 37 261 1.1E-84 T 12-10-2018 M892_08495 e556ac42bfab087e53a0217eb082d7a0 455 SUPERFAMILY SSF50156 379 454 3.94E-14 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 M892_08495 e556ac42bfab087e53a0217eb082d7a0 455 Gene3D G3DSA:2.30.42.10 362 455 8.1E-27 T 12-10-2018 M892_08495 e556ac42bfab087e53a0217eb082d7a0 455 Gene3D G3DSA:2.30.42.10 265 361 1.2E-27 T 12-10-2018 M892_08495 e556ac42bfab087e53a0217eb082d7a0 455 SUPERFAMILY SSF50156 249 358 8.25E-25 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 M892_08495 e556ac42bfab087e53a0217eb082d7a0 455 PRINTS PR00834 HtrA/DegQ protease family signature 221 238 1.1E-56 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 M892_08495 e556ac42bfab087e53a0217eb082d7a0 455 PRINTS PR00834 HtrA/DegQ protease family signature 307 319 1.1E-56 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 M892_08495 e556ac42bfab087e53a0217eb082d7a0 455 PRINTS PR00834 HtrA/DegQ protease family signature 164 188 1.1E-56 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 M892_08495 e556ac42bfab087e53a0217eb082d7a0 455 PRINTS PR00834 HtrA/DegQ protease family signature 199 216 1.1E-56 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 M892_08495 e556ac42bfab087e53a0217eb082d7a0 455 PRINTS PR00834 HtrA/DegQ protease family signature 102 114 1.1E-56 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 M892_08495 e556ac42bfab087e53a0217eb082d7a0 455 PRINTS PR00834 HtrA/DegQ protease family signature 123 143 1.1E-56 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 M892_08495 e556ac42bfab087e53a0217eb082d7a0 455 Pfam PF13365 Trypsin-like peptidase domain 92 228 4.5E-31 T 12-10-2018 M892_08495 e556ac42bfab087e53a0217eb082d7a0 455 Pfam PF13180 PDZ domain 383 446 2.4E-8 T 12-10-2018 IPR001478 PDZ domain GO:0005515 M892_08495 e556ac42bfab087e53a0217eb082d7a0 455 Pfam PF13180 PDZ domain 268 358 7.9E-17 T 12-10-2018 IPR001478 PDZ domain GO:0005515 M892_08495 e556ac42bfab087e53a0217eb082d7a0 455 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 39 453 1.3E-162 T 12-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 M892_15355 d712a438d45464bc4d71285f201f0cac 744 Pfam PF01627 Hpt domain 8 99 6.9E-17 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 M892_15355 d712a438d45464bc4d71285f201f0cac 744 SMART SM00387 459 602 2.2E-21 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_15355 d712a438d45464bc4d71285f201f0cac 744 SMART SM00260 594 735 2.9E-34 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 M892_15355 d712a438d45464bc4d71285f201f0cac 744 SMART SM00073 6 103 3.6E-19 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 M892_15355 d712a438d45464bc4d71285f201f0cac 744 Gene3D G3DSA:2.40.50.180 625 690 3.0E-35 T 12-10-2018 M892_15355 d712a438d45464bc4d71285f201f0cac 744 SUPERFAMILY SSF47384 356 415 6.28E-14 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M892_15355 d712a438d45464bc4d71285f201f0cac 744 SUPERFAMILY SSF47226 6 129 6.02E-31 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 M892_15355 d712a438d45464bc4d71285f201f0cac 744 Gene3D G3DSA:2.30.30.40 602 731 3.0E-35 T 12-10-2018 M892_15355 d712a438d45464bc4d71285f201f0cac 744 Pfam PF01584 CheW-like domain 608 737 7.0E-23 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 M892_15355 d712a438d45464bc4d71285f201f0cac 744 Gene3D G3DSA:3.30.565.10 415 601 8.6E-56 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_15355 d712a438d45464bc4d71285f201f0cac 744 SMART SM01231 354 414 1.7E-17 T 12-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 M892_15355 d712a438d45464bc4d71285f201f0cac 744 Gene3D G3DSA:1.10.287.560 355 414 2.2E-19 T 12-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 M892_15355 d712a438d45464bc4d71285f201f0cac 744 PRINTS PR00344 Bacterial sensor protein C-terminal signature 586 599 9.4E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_15355 d712a438d45464bc4d71285f201f0cac 744 PRINTS PR00344 Bacterial sensor protein C-terminal signature 546 556 9.4E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_15355 d712a438d45464bc4d71285f201f0cac 744 PRINTS PR00344 Bacterial sensor protein C-terminal signature 504 518 9.4E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_15355 d712a438d45464bc4d71285f201f0cac 744 PRINTS PR00344 Bacterial sensor protein C-terminal signature 562 580 9.4E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_15355 d712a438d45464bc4d71285f201f0cac 744 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 355 414 2.9E-12 T 12-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 M892_15355 d712a438d45464bc4d71285f201f0cac 744 Gene3D G3DSA:1.20.120.160 2 142 3.4E-36 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 M892_15355 d712a438d45464bc4d71285f201f0cac 744 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 462 601 1.7E-17 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_15355 d712a438d45464bc4d71285f201f0cac 744 SUPERFAMILY SSF50341 601 735 9.02E-31 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 M892_15355 d712a438d45464bc4d71285f201f0cac 744 SUPERFAMILY SSF55874 417 600 9.56E-39 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_00825 6a32f1abb4bfb5e6e9b5a14fcb1deae2 163 SUPERFAMILY SSF54523 7 115 1.41E-12 T 12-10-2018 M892_00825 6a32f1abb4bfb5e6e9b5a14fcb1deae2 163 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 27 1.8E-8 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M892_00825 6a32f1abb4bfb5e6e9b5a14fcb1deae2 163 Gene3D G3DSA:3.30.700.10 7 99 1.3E-10 T 12-10-2018 M892_00825 6a32f1abb4bfb5e6e9b5a14fcb1deae2 163 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 1.2E-7 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M892_05440 9e9d98d3cb0b78dc52925c05302d52e0 583 SUPERFAMILY SSF52540 331 581 6.97E-93 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_05440 9e9d98d3cb0b78dc52925c05302d52e0 583 SMART SM00382 368 555 1.2E-18 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_05440 9e9d98d3cb0b78dc52925c05302d52e0 583 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_05440 9e9d98d3cb0b78dc52925c05302d52e0 583 SUPERFAMILY SSF90123 14 327 2.09E-75 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 M892_05440 9e9d98d3cb0b78dc52925c05302d52e0 583 Gene3D G3DSA:3.40.50.300 329 582 6.1E-96 T 12-10-2018 M892_05440 9e9d98d3cb0b78dc52925c05302d52e0 583 Pfam PF00005 ABC transporter 359 509 1.7E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_05440 9e9d98d3cb0b78dc52925c05302d52e0 583 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 12 582 1.1E-238 T 12-10-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 M892_05440 9e9d98d3cb0b78dc52925c05302d52e0 583 Pfam PF00664 ABC transporter transmembrane region 27 293 1.4E-56 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 M892_05440 9e9d98d3cb0b78dc52925c05302d52e0 583 Gene3D G3DSA:1.20.1560.10 2 328 1.6E-83 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 M892_25065 a40aeb5561e9f125204207ecc599a7c5 178 SUPERFAMILY SSF89028 8 169 2.75E-37 T 12-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 M892_25065 a40aeb5561e9f125204207ecc599a7c5 178 Pfam PF01923 Cobalamin adenosyltransferase 19 156 2.4E-16 T 12-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 M892_25065 a40aeb5561e9f125204207ecc599a7c5 178 Gene3D G3DSA:1.20.1200.10 17 173 2.1E-24 T 12-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 M892_25065 a40aeb5561e9f125204207ecc599a7c5 178 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 28 149 2.0E-60 T 12-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 M892_01510 7d57797e9d6321c5574e85935561c3ab 436 Pfam PF02321 Outer membrane efflux protein 24 201 6.0E-27 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 M892_01510 7d57797e9d6321c5574e85935561c3ab 436 Pfam PF02321 Outer membrane efflux protein 233 416 2.5E-29 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 M892_01510 7d57797e9d6321c5574e85935561c3ab 436 Gene3D G3DSA:1.20.1600.10 22 427 2.0E-80 T 12-10-2018 M892_01510 7d57797e9d6321c5574e85935561c3ab 436 SUPERFAMILY SSF56954 23 430 5.75E-86 T 12-10-2018 M892_01510 7d57797e9d6321c5574e85935561c3ab 436 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 22 430 1.4E-120 T 12-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 M892_12210 035302b0530e6e8d3771a3558cec37aa 195 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 192 2.0E-85 T 12-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 M892_12210 035302b0530e6e8d3771a3558cec37aa 195 Gene3D G3DSA:3.40.50.880 1 193 2.3E-60 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M892_12210 035302b0530e6e8d3771a3558cec37aa 195 PRINTS PR00097 Anthranilate synthase component II signature 47 56 3.7E-36 T 12-10-2018 M892_12210 035302b0530e6e8d3771a3558cec37aa 195 PRINTS PR00097 Anthranilate synthase component II signature 74 85 3.7E-36 T 12-10-2018 M892_12210 035302b0530e6e8d3771a3558cec37aa 195 PRINTS PR00097 Anthranilate synthase component II signature 169 182 3.7E-36 T 12-10-2018 M892_12210 035302b0530e6e8d3771a3558cec37aa 195 PRINTS PR00097 Anthranilate synthase component II signature 99 107 3.7E-36 T 12-10-2018 M892_12210 035302b0530e6e8d3771a3558cec37aa 195 PRINTS PR00097 Anthranilate synthase component II signature 2 16 3.7E-36 T 12-10-2018 M892_12210 035302b0530e6e8d3771a3558cec37aa 195 PRINTS PR00097 Anthranilate synthase component II signature 119 131 3.7E-36 T 12-10-2018 M892_12210 035302b0530e6e8d3771a3558cec37aa 195 Pfam PF00117 Glutamine amidotransferase class-I 4 191 2.1E-54 T 12-10-2018 IPR017926 Glutamine amidotransferase M892_12210 035302b0530e6e8d3771a3558cec37aa 195 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 5.4E-5 T 12-10-2018 M892_12210 035302b0530e6e8d3771a3558cec37aa 195 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 5.4E-5 T 12-10-2018 M892_12210 035302b0530e6e8d3771a3558cec37aa 195 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 4.4E-13 T 12-10-2018 M892_12210 035302b0530e6e8d3771a3558cec37aa 195 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 4.4E-13 T 12-10-2018 M892_12210 035302b0530e6e8d3771a3558cec37aa 195 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 4.4E-13 T 12-10-2018 M892_12210 035302b0530e6e8d3771a3558cec37aa 195 SUPERFAMILY SSF52317 1 191 1.83E-53 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M892_11600 7b24a2615a30dfca18824823678b7e56 530 SMART SM00798 137 462 9.2E-218 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 M892_11600 7b24a2615a30dfca18824823678b7e56 530 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 530 45.969 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 M892_11600 7b24a2615a30dfca18824823678b7e56 530 PIRSF PIRSF000414 1 530 2.9E-229 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 M892_11600 7b24a2615a30dfca18824823678b7e56 530 SMART SM00851 19 132 1.9E-61 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain M892_11600 7b24a2615a30dfca18824823678b7e56 530 SUPERFAMILY SSF52335 7 197 4.32E-72 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily M892_11600 7b24a2615a30dfca18824823678b7e56 530 Gene3D G3DSA:3.40.140.20 394 530 3.5E-60 T 12-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 M892_11600 7b24a2615a30dfca18824823678b7e56 530 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 8 530 1.4E-260 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 M892_11600 7b24a2615a30dfca18824823678b7e56 530 Gene3D G3DSA:3.40.140.20 219 375 3.2E-58 T 12-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 M892_11600 7b24a2615a30dfca18824823678b7e56 530 SUPERFAMILY SSF53927 222 530 1.3E-130 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 M892_11600 7b24a2615a30dfca18824823678b7e56 530 Pfam PF02142 MGS-like domain 19 132 4.5E-31 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain M892_11600 7b24a2615a30dfca18824823678b7e56 530 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 461 2.3E-119 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 M892_11600 7b24a2615a30dfca18824823678b7e56 530 Gene3D G3DSA:3.40.50.1380 1 200 8.6E-88 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily M892_06835 b5b3a5e5b46513c152b986467a033271 299 Pfam PF00571 CBS domain 75 132 1.7E-8 T 12-10-2018 IPR000644 CBS domain M892_06835 b5b3a5e5b46513c152b986467a033271 299 Pfam PF00571 CBS domain 145 195 1.6E-6 T 12-10-2018 IPR000644 CBS domain M892_06835 b5b3a5e5b46513c152b986467a033271 299 SUPERFAMILY SSF54631 65 206 1.22E-33 T 12-10-2018 M892_06835 b5b3a5e5b46513c152b986467a033271 299 Pfam PF03471 Transporter associated domain 212 287 4.5E-22 T 12-10-2018 IPR005170 Transporter-associated domain M892_06835 b5b3a5e5b46513c152b986467a033271 299 SMART SM01091 211 289 2.8E-29 T 12-10-2018 IPR005170 Transporter-associated domain M892_06835 b5b3a5e5b46513c152b986467a033271 299 SMART SM00116 84 133 0.0024 T 12-10-2018 IPR000644 CBS domain M892_06835 b5b3a5e5b46513c152b986467a033271 299 SMART SM00116 147 195 0.028 T 12-10-2018 IPR000644 CBS domain M892_06835 b5b3a5e5b46513c152b986467a033271 299 SUPERFAMILY SSF56176 206 287 2.73E-22 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 M892_06835 b5b3a5e5b46513c152b986467a033271 299 Gene3D G3DSA:3.10.580.10 57 203 1.8E-54 T 12-10-2018 M892_06835 b5b3a5e5b46513c152b986467a033271 299 Gene3D G3DSA:3.30.465.10 204 296 1.3E-30 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 M892_19980 c3ef734ae8e91c616312d06d61233ea9 457 Gene3D G3DSA:1.10.287.470 234 308 1.1E-13 T 12-10-2018 M892_19980 c3ef734ae8e91c616312d06d61233ea9 457 Gene3D G3DSA:2.40.50.100 91 206 5.9E-6 T 12-10-2018 M892_19980 c3ef734ae8e91c616312d06d61233ea9 457 Gene3D G3DSA:2.40.30.170 346 434 1.1E-13 T 12-10-2018 M892_19980 c3ef734ae8e91c616312d06d61233ea9 457 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 354 378 8.6E-56 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 M892_19980 c3ef734ae8e91c616312d06d61233ea9 457 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 421 436 8.6E-56 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 M892_19980 c3ef734ae8e91c616312d06d61233ea9 457 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 436 456 8.6E-56 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 M892_19980 c3ef734ae8e91c616312d06d61233ea9 457 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 52 75 8.6E-56 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 M892_19980 c3ef734ae8e91c616312d06d61233ea9 457 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 321 342 8.6E-56 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 M892_19980 c3ef734ae8e91c616312d06d61233ea9 457 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 94 114 8.6E-56 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 M892_19980 c3ef734ae8e91c616312d06d61233ea9 457 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 378 401 8.6E-56 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 M892_19980 c3ef734ae8e91c616312d06d61233ea9 457 Pfam PF13533 Biotin-lipoyl like 87 117 6.7E-7 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain M892_19980 c3ef734ae8e91c616312d06d61233ea9 457 Gene3D G3DSA:2.40.50.100 309 345 1.1E-13 T 12-10-2018 M892_19980 c3ef734ae8e91c616312d06d61233ea9 457 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 43 457 8.1E-118 T 12-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 M892_19980 c3ef734ae8e91c616312d06d61233ea9 457 ProSitePatterns PS00543 HlyD family secretion proteins signature. 421 443 - T 12-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 M892_19980 c3ef734ae8e91c616312d06d61233ea9 457 Gene3D G3DSA:1.10.287.470 117 202 5.9E-6 T 12-10-2018 M892_19980 c3ef734ae8e91c616312d06d61233ea9 457 Pfam PF13437 HlyD family secretion protein 309 414 4.0E-17 T 12-10-2018 M892_23865 4a11a7288c200c2c64fd7dda5706acfd 276 Pfam PF03466 LysR substrate binding domain 88 238 7.3E-21 T 12-10-2018 IPR005119 LysR, substrate-binding M892_23865 4a11a7288c200c2c64fd7dda5706acfd 276 SUPERFAMILY SSF46785 1 87 9.52E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_23865 4a11a7288c200c2c64fd7dda5706acfd 276 Gene3D G3DSA:1.10.10.10 1 91 4.9E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_23865 4a11a7288c200c2c64fd7dda5706acfd 276 Gene3D G3DSA:3.40.190.10 93 254 7.1E-41 T 12-10-2018 M892_23865 4a11a7288c200c2c64fd7dda5706acfd 276 Gene3D G3DSA:3.40.190.10 159 249 7.1E-41 T 12-10-2018 M892_23865 4a11a7288c200c2c64fd7dda5706acfd 276 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 6.7E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_23865 4a11a7288c200c2c64fd7dda5706acfd 276 SUPERFAMILY SSF53850 88 254 1.99E-20 T 12-10-2018 M892_23865 4a11a7288c200c2c64fd7dda5706acfd 276 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.5E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_23865 4a11a7288c200c2c64fd7dda5706acfd 276 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.5E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_23865 4a11a7288c200c2c64fd7dda5706acfd 276 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.5E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_14890 5334531c531ec6ab056911a6f021c65b 253 Pfam PF00318 Ribosomal protein S2 20 235 1.7E-93 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_14890 5334531c531ec6ab056911a6f021c65b 253 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 13 236 40.912 T 12-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_14890 5334531c531ec6ab056911a6f021c65b 253 Gene3D G3DSA:3.40.50.10490 19 230 1.4E-91 T 12-10-2018 M892_14890 5334531c531ec6ab056911a6f021c65b 253 SUPERFAMILY SSF52313 17 243 1.83E-95 T 12-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily M892_14890 5334531c531ec6ab056911a6f021c65b 253 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 17 28 - T 12-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 M892_14890 5334531c531ec6ab056911a6f021c65b 253 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 14 237 9.8E-107 T 12-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_14890 5334531c531ec6ab056911a6f021c65b 253 PRINTS PR00395 Ribosomal protein S2 signature 98 115 3.9E-37 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_14890 5334531c531ec6ab056911a6f021c65b 253 PRINTS PR00395 Ribosomal protein S2 signature 186 197 3.9E-37 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_14890 5334531c531ec6ab056911a6f021c65b 253 PRINTS PR00395 Ribosomal protein S2 signature 207 221 3.9E-37 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_14890 5334531c531ec6ab056911a6f021c65b 253 PRINTS PR00395 Ribosomal protein S2 signature 48 57 3.9E-37 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_14890 5334531c531ec6ab056911a6f021c65b 253 PRINTS PR00395 Ribosomal protein S2 signature 169 186 3.9E-37 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_14890 5334531c531ec6ab056911a6f021c65b 253 PRINTS PR00395 Ribosomal protein S2 signature 17 35 3.9E-37 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_14890 5334531c531ec6ab056911a6f021c65b 253 Gene3D G3DSA:1.10.287.610 114 161 1.4E-91 T 12-10-2018 M892_14890 5334531c531ec6ab056911a6f021c65b 253 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 169 193 - T 12-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 M892_06475 498f9b4fdb635fef0f1ec50b0d3ade0a 323 SMART SM00771 185 315 8.1E-70 T 12-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 M892_06475 498f9b4fdb635fef0f1ec50b0d3ade0a 323 Hamap MF_00509 Cell division protein ZipA [zipA]. 2 317 22.577 T 12-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 M892_06475 498f9b4fdb635fef0f1ec50b0d3ade0a 323 Gene3D G3DSA:3.30.1400.10 184 323 3.4E-49 T 12-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 M892_06475 498f9b4fdb635fef0f1ec50b0d3ade0a 323 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 188 323 4.0E-73 T 12-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 M892_06475 498f9b4fdb635fef0f1ec50b0d3ade0a 323 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 187 314 7.1E-46 T 12-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 M892_06475 498f9b4fdb635fef0f1ec50b0d3ade0a 323 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 3 315 3.0E-87 T 12-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 M892_06475 498f9b4fdb635fef0f1ec50b0d3ade0a 323 SUPERFAMILY SSF64383 187 319 8.76E-49 T 12-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 M892_16205 8d28471d80a453dd0799d608ec7189ee 329 Pfam PF06463 Molybdenum Cofactor Synthesis C 186 312 3.0E-39 T 12-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 M892_16205 8d28471d80a453dd0799d608ec7189ee 329 Pfam PF04055 Radical SAM superfamily 19 181 5.3E-27 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 M892_16205 8d28471d80a453dd0799d608ec7189ee 329 SUPERFAMILY SSF102114 6 289 5.76E-70 T 12-10-2018 M892_16205 8d28471d80a453dd0799d608ec7189ee 329 Pfam PF13353 4Fe-4S single cluster domain 23 125 1.7E-8 T 12-10-2018 M892_16205 8d28471d80a453dd0799d608ec7189ee 329 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 5 329 36.888 T 12-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 M892_16205 8d28471d80a453dd0799d608ec7189ee 329 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 6 329 5.5E-105 T 12-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 M892_16205 8d28471d80a453dd0799d608ec7189ee 329 SMART SM00729 14 219 5.3E-5 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 M892_16205 8d28471d80a453dd0799d608ec7189ee 329 Gene3D G3DSA:3.20.20.70 2 329 1.0E-82 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M892_04645 241f6169719b6e7300e5dac9ab6a9bcd 68 TIGRFAM TIGR02501 type_III_yscE: type III secretion system protein, YseE family 1 65 8.0E-11 T 12-10-2018 IPR012671 Type III secretion system, secretion protein E GO:0009405 M892_04645 241f6169719b6e7300e5dac9ab6a9bcd 68 Pfam PF08988 Type III secretion system, cytoplasmic E component of needle 1 65 7.9E-11 T 12-10-2018 IPR012671 Type III secretion system, secretion protein E GO:0009405 M892_04645 241f6169719b6e7300e5dac9ab6a9bcd 68 Gene3D G3DSA:1.20.5.420 1 67 3.7E-7 T 12-10-2018 M892_11380 7e803f8bbd5a5c6fc4012f01dca547cb 617 Hamap MF_01531 Vitamin B12 transporter BtuB [btuB]. 2 617 34.073 T 12-10-2018 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0015420|GO:0015889|GO:0016020 M892_11380 7e803f8bbd5a5c6fc4012f01dca547cb 617 Pfam PF07715 TonB-dependent Receptor Plug Domain 48 148 4.6E-24 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain M892_11380 7e803f8bbd5a5c6fc4012f01dca547cb 617 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 36 - T 12-10-2018 IPR010916 TonB box, conserved site M892_11380 7e803f8bbd5a5c6fc4012f01dca547cb 617 Pfam PF00593 TonB dependent receptor 207 616 1.7E-44 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel M892_11380 7e803f8bbd5a5c6fc4012f01dca547cb 617 SUPERFAMILY SSF56935 29 617 5.86E-105 T 12-10-2018 M892_11380 7e803f8bbd5a5c6fc4012f01dca547cb 617 Gene3D G3DSA:2.170.130.10 19 153 9.5E-31 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily M892_11380 7e803f8bbd5a5c6fc4012f01dca547cb 617 Gene3D G3DSA:2.40.170.20 158 617 5.2E-109 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily M892_04965 292d4f7b581c3384fe59e76f22efaadc 356 PRINTS PR00471 Acetate kinase family signature 3 14 1.2E-15 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 M892_04965 292d4f7b581c3384fe59e76f22efaadc 356 PRINTS PR00471 Acetate kinase family signature 297 313 1.2E-15 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 M892_04965 292d4f7b581c3384fe59e76f22efaadc 356 PRINTS PR00471 Acetate kinase family signature 274 287 1.2E-15 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 M892_04965 292d4f7b581c3384fe59e76f22efaadc 356 PRINTS PR00471 Acetate kinase family signature 179 200 1.2E-15 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 M892_04965 292d4f7b581c3384fe59e76f22efaadc 356 SUPERFAMILY SSF53067 1 172 8.81E-60 T 12-10-2018 M892_04965 292d4f7b581c3384fe59e76f22efaadc 356 PIRSF PIRSF036458 1 356 7.6E-139 T 12-10-2018 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 M892_04965 292d4f7b581c3384fe59e76f22efaadc 356 TIGRFAM TIGR02707 butyr_kinase: butyrate kinase 2 351 3.0E-139 T 12-10-2018 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 M892_04965 292d4f7b581c3384fe59e76f22efaadc 356 Hamap MF_00542 Probable butyrate kinase [buk]. 1 356 144.007 T 12-10-2018 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 M892_04965 292d4f7b581c3384fe59e76f22efaadc 356 Gene3D G3DSA:3.30.420.40 137 333 1.7E-137 T 12-10-2018 M892_04965 292d4f7b581c3384fe59e76f22efaadc 356 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 179 196 - T 12-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 M892_04965 292d4f7b581c3384fe59e76f22efaadc 356 Pfam PF00871 Acetokinase family 2 324 1.9E-59 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 M892_04965 292d4f7b581c3384fe59e76f22efaadc 356 SUPERFAMILY SSF53067 150 344 9.88E-50 T 12-10-2018 M892_04965 292d4f7b581c3384fe59e76f22efaadc 356 Gene3D G3DSA:3.30.420.40 2 356 1.7E-137 T 12-10-2018 M892_20150 a420005525d4bb55da520fe3c5d35f90 186 Gene3D G3DSA:2.160.10.10 1 182 4.5E-48 T 12-10-2018 M892_20150 a420005525d4bb55da520fe3c5d35f90 186 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 15 44 1.8E-6 T 12-10-2018 IPR001451 Hexapeptide repeat M892_20150 a420005525d4bb55da520fe3c5d35f90 186 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 79 112 1.8E-4 T 12-10-2018 IPR001451 Hexapeptide repeat M892_20150 a420005525d4bb55da520fe3c5d35f90 186 SUPERFAMILY SSF51161 7 137 1.02E-30 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily M892_06780 31b0e7903cf872d28cc3434856f812a7 311 Gene3D G3DSA:3.40.50.2020 4 299 7.1E-136 T 12-10-2018 M892_06780 31b0e7903cf872d28cc3434856f812a7 311 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 1 118 1.4E-50 T 12-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 M892_06780 31b0e7903cf872d28cc3434856f812a7 311 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 1 311 2.6E-125 T 12-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 M892_06780 31b0e7903cf872d28cc3434856f812a7 311 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 1 311 49.826 T 12-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 M892_06780 31b0e7903cf872d28cc3434856f812a7 311 Pfam PF14572 Phosphoribosyl synthetase-associated domain 201 310 1.8E-31 T 12-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 M892_06780 31b0e7903cf872d28cc3434856f812a7 311 Gene3D G3DSA:3.40.50.2020 145 287 7.1E-136 T 12-10-2018 M892_06780 31b0e7903cf872d28cc3434856f812a7 311 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 126 141 - T 12-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 M892_06780 31b0e7903cf872d28cc3434856f812a7 311 SMART SM01400 1 118 2.0E-77 T 12-10-2018 M892_06780 31b0e7903cf872d28cc3434856f812a7 311 SUPERFAMILY SSF53271 66 303 3.49E-67 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like M892_14830 46b9090f91d0b9e031e0f4cee37ec74f 86 SUPERFAMILY SSF143800 1 81 1.8E-23 T 12-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_14830 46b9090f91d0b9e031e0f4cee37ec74f 86 Gene3D G3DSA:2.30.170.50 1 84 8.6E-25 T 12-10-2018 M892_14830 46b9090f91d0b9e031e0f4cee37ec74f 86 Pfam PF01197 Ribosomal protein L31 1 79 8.9E-28 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_14830 46b9090f91d0b9e031e0f4cee37ec74f 86 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 81 29.787 T 12-10-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_14830 46b9090f91d0b9e031e0f4cee37ec74f 86 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 80 9.8E-19 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_14830 46b9090f91d0b9e031e0f4cee37ec74f 86 PRINTS PR01249 Ribosomal protein L31 signature 2 19 4.7E-17 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_14830 46b9090f91d0b9e031e0f4cee37ec74f 86 PRINTS PR01249 Ribosomal protein L31 signature 60 78 4.7E-17 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_14830 46b9090f91d0b9e031e0f4cee37ec74f 86 PRINTS PR01249 Ribosomal protein L31 signature 45 60 4.7E-17 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_14830 46b9090f91d0b9e031e0f4cee37ec74f 86 ProSitePatterns PS01143 Ribosomal protein L31 signature. 49 70 - T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_18810 83e64422b60bb5b5d459bbcbf5a2b0ef 401 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 9 384 2.9E-62 T 12-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 M892_18810 83e64422b60bb5b5d459bbcbf5a2b0ef 401 Gene3D G3DSA:1.20.1720.10 10 387 3.7E-98 T 12-10-2018 M892_18810 83e64422b60bb5b5d459bbcbf5a2b0ef 401 Pfam PF07690 Major Facilitator Superfamily 15 354 5.1E-45 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 M892_18810 83e64422b60bb5b5d459bbcbf5a2b0ef 401 SUPERFAMILY SSF103473 9 389 1.22E-58 T 12-10-2018 IPR036259 MFS transporter superfamily M892_17135 8571cf7863b4f77c3315228763056bdb 787 Pfam PF00136 DNA polymerase family B 377 742 2.1E-42 T 12-10-2018 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M892_17135 8571cf7863b4f77c3315228763056bdb 787 Gene3D G3DSA:3.30.70.2250 41 108 5.2E-40 T 12-10-2018 M892_17135 8571cf7863b4f77c3315228763056bdb 787 Gene3D G3DSA:3.90.1600.30 516 638 2.5E-8 T 12-10-2018 M892_17135 8571cf7863b4f77c3315228763056bdb 787 Gene3D G3DSA:3.90.1600.10 348 454 2.7E-28 T 12-10-2018 IPR023211 DNA polymerase, palm domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M892_17135 8571cf7863b4f77c3315228763056bdb 787 SMART SM00486 153 558 1.6E-68 T 12-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M892_17135 8571cf7863b4f77c3315228763056bdb 787 Gene3D G3DSA:1.10.132.60 643 787 3.1E-61 T 12-10-2018 M892_17135 8571cf7863b4f77c3315228763056bdb 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 415 428 1.6E-10 T 12-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M892_17135 8571cf7863b4f77c3315228763056bdb 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 544 552 1.6E-10 T 12-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M892_17135 8571cf7863b4f77c3315228763056bdb 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 492 504 1.6E-10 T 12-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M892_17135 8571cf7863b4f77c3315228763056bdb 787 Gene3D G3DSA:1.10.287.690 468 514 5.6E-25 T 12-10-2018 M892_17135 8571cf7863b4f77c3315228763056bdb 787 SUPERFAMILY SSF53098 4 389 2.23E-86 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_17135 8571cf7863b4f77c3315228763056bdb 787 SUPERFAMILY SSF56672 385 780 1.61E-117 T 12-10-2018 M892_17135 8571cf7863b4f77c3315228763056bdb 787 Pfam PF03104 DNA polymerase family B, exonuclease domain 74 296 3.4E-19 T 12-10-2018 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M892_17135 8571cf7863b4f77c3315228763056bdb 787 ProSitePatterns PS00116 DNA polymerase family B signature. 546 554 - T 12-10-2018 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M892_17135 8571cf7863b4f77c3315228763056bdb 787 Gene3D G3DSA:2.40.50.590 6 153 5.2E-40 T 12-10-2018 M892_17135 8571cf7863b4f77c3315228763056bdb 787 Gene3D G3DSA:3.30.420.10 156 347 4.8E-71 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M892_17050 e5f2426688dc4b375aeca51e62067fcf 849 Gene3D G3DSA:3.30.565.10 534 688 8.0E-26 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_17050 e5f2426688dc4b375aeca51e62067fcf 849 Pfam PF00072 Response regulator receiver domain 723 830 8.4E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_17050 e5f2426688dc4b375aeca51e62067fcf 849 PRINTS PR00344 Bacterial sensor protein C-terminal signature 643 661 8.2E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_17050 e5f2426688dc4b375aeca51e62067fcf 849 PRINTS PR00344 Bacterial sensor protein C-terminal signature 613 627 8.2E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_17050 e5f2426688dc4b375aeca51e62067fcf 849 PRINTS PR00344 Bacterial sensor protein C-terminal signature 667 680 8.2E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_17050 e5f2426688dc4b375aeca51e62067fcf 849 PRINTS PR00344 Bacterial sensor protein C-terminal signature 631 641 8.2E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_17050 e5f2426688dc4b375aeca51e62067fcf 849 Gene3D G3DSA:3.40.50.2300 710 848 3.2E-32 T 12-10-2018 M892_17050 e5f2426688dc4b375aeca51e62067fcf 849 Gene3D G3DSA:1.10.287.130 424 526 1.1E-5 T 12-10-2018 M892_17050 e5f2426688dc4b375aeca51e62067fcf 849 SUPERFAMILY SSF55874 531 683 1.1E-26 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_17050 e5f2426688dc4b375aeca51e62067fcf 849 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 581 680 1.4E-13 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_17050 e5f2426688dc4b375aeca51e62067fcf 849 SUPERFAMILY SSF47384 452 504 9.81E-6 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M892_17050 e5f2426688dc4b375aeca51e62067fcf 849 SMART SM00387 574 683 5.9E-22 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_17050 e5f2426688dc4b375aeca51e62067fcf 849 SMART SM00448 721 831 3.1E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_17050 e5f2426688dc4b375aeca51e62067fcf 849 SUPERFAMILY SSF52172 720 838 9.11E-30 T 12-10-2018 IPR011006 CheY-like superfamily M892_17050 e5f2426688dc4b375aeca51e62067fcf 849 SMART SM00388 461 530 1.7E-4 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M892_16145 bf44f60f338ab59951159f2c009a8700 873 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 140 283 2.7E-47 T 12-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M892_16145 bf44f60f338ab59951159f2c009a8700 873 Pfam PF12838 4Fe-4S dicluster domain 378 430 1.2E-7 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M892_16145 bf44f60f338ab59951159f2c009a8700 873 Pfam PF13375 RnfC Barrel sandwich hybrid domain 14 115 1.1E-32 T 12-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain M892_16145 bf44f60f338ab59951159f2c009a8700 873 Pfam PF10531 SLBB domain 296 345 1.0E-8 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M892_16145 bf44f60f338ab59951159f2c009a8700 873 Gene3D G3DSA:3.40.50.11540 145 290 1.5E-12 T 12-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M892_16145 bf44f60f338ab59951159f2c009a8700 873 Gene3D G3DSA:1.10.1060.10 367 445 8.5E-12 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 M892_16145 bf44f60f338ab59951159f2c009a8700 873 SUPERFAMILY SSF142019 95 302 4.71E-59 T 12-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M892_16145 bf44f60f338ab59951159f2c009a8700 873 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 13 447 2.0E-187 T 12-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 M892_16145 bf44f60f338ab59951159f2c009a8700 873 SUPERFAMILY SSF46548 336 446 7.46E-21 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 M892_16145 bf44f60f338ab59951159f2c009a8700 873 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 417 428 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M892_16145 bf44f60f338ab59951159f2c009a8700 873 Hamap MF_00461 Ion-translocating oxidoreductase complex subunit C [rsxC]. 1 759 247.315 T 12-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 M892_25575 1772f070cc9821c06d42dc87b290c023 273 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 20 271 1.5E-75 T 12-10-2018 IPR011862 Phosphate binding protein GO:0042301 M892_25575 1772f070cc9821c06d42dc87b290c023 273 Pfam PF12849 PBP superfamily domain 23 259 1.3E-41 T 12-10-2018 IPR024370 PBP domain M892_25575 1772f070cc9821c06d42dc87b290c023 273 SUPERFAMILY SSF53850 16 272 5.44E-72 T 12-10-2018 M892_25575 1772f070cc9821c06d42dc87b290c023 273 Gene3D G3DSA:3.40.190.10 100 233 2.5E-82 T 12-10-2018 M892_25575 1772f070cc9821c06d42dc87b290c023 273 Gene3D G3DSA:3.40.190.10 30 264 2.5E-82 T 12-10-2018 M892_02125 b324f5f5dbefea89b59c2b84931f6beb 136 Pfam PF00293 NUDIX domain 4 117 2.4E-16 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 M892_02125 b324f5f5dbefea89b59c2b84931f6beb 136 PRINTS PR00502 NUDIX hydrolase family signature 29 43 1.3E-5 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 M892_02125 b324f5f5dbefea89b59c2b84931f6beb 136 PRINTS PR00502 NUDIX hydrolase family signature 43 58 1.3E-5 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 M892_02125 b324f5f5dbefea89b59c2b84931f6beb 136 Gene3D G3DSA:3.90.79.10 4 130 8.8E-22 T 12-10-2018 M892_02125 b324f5f5dbefea89b59c2b84931f6beb 136 SUPERFAMILY SSF55811 5 120 3.93E-22 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 M892_23945 4300f1cc0693e1ed3f5f52872df2dd8c 780 Gene3D G3DSA:3.10.450.40 112 195 1.9E-18 T 12-10-2018 M892_23945 4300f1cc0693e1ed3f5f52872df2dd8c 780 SUPERFAMILY SSF49299 611 691 8.89E-22 T 12-10-2018 IPR035986 PKD domain superfamily M892_23945 4300f1cc0693e1ed3f5f52872df2dd8c 780 Gene3D G3DSA:1.10.390.10 350 496 1.8E-50 T 12-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily M892_23945 4300f1cc0693e1ed3f5f52872df2dd8c 780 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 207 345 7.2E-38 T 12-10-2018 IPR013856 Peptidase M4 domain GO:0004222 M892_23945 4300f1cc0693e1ed3f5f52872df2dd8c 780 Gene3D G3DSA:2.60.40.10 607 693 1.7E-27 T 12-10-2018 IPR013783 Immunoglobulin-like fold M892_23945 4300f1cc0693e1ed3f5f52872df2dd8c 780 SMART SM00089 609 693 7.7E-20 T 12-10-2018 IPR022409 PKD/Chitinase domain M892_23945 4300f1cc0693e1ed3f5f52872df2dd8c 780 SUPERFAMILY SSF55486 200 492 3.11E-85 T 12-10-2018 M892_23945 4300f1cc0693e1ed3f5f52872df2dd8c 780 Gene3D G3DSA:2.60.120.380 507 605 1.0E-18 T 12-10-2018 M892_23945 4300f1cc0693e1ed3f5f52872df2dd8c 780 Gene3D G3DSA:3.10.170.10 198 349 1.1E-64 T 12-10-2018 M892_23945 4300f1cc0693e1ed3f5f52872df2dd8c 780 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 357 368 2.5E-26 T 12-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 M892_23945 4300f1cc0693e1ed3f5f52872df2dd8c 780 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 302 322 2.5E-26 T 12-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 M892_23945 4300f1cc0693e1ed3f5f52872df2dd8c 780 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 336 352 2.5E-26 T 12-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 M892_23945 4300f1cc0693e1ed3f5f52872df2dd8c 780 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 419 435 2.5E-26 T 12-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 M892_23945 4300f1cc0693e1ed3f5f52872df2dd8c 780 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 348 492 1.1E-36 T 12-10-2018 IPR001570 Peptidase M4, C-terminal GO:0004222 M892_23945 4300f1cc0693e1ed3f5f52872df2dd8c 780 Pfam PF00801 PKD domain 622 682 5.9E-16 T 12-10-2018 IPR000601 PKD domain M892_05000 d47e39d190effcfcdd34c8a23b6e8bb5 514 Pfam PF13005 zinc-finger binding domain of transposase IS66 120 164 1.6E-16 T 12-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 M892_05000 d47e39d190effcfcdd34c8a23b6e8bb5 514 Pfam PF03050 Transposase IS66 family 184 467 1.4E-101 T 12-10-2018 IPR004291 Transposase, IS66 M892_05000 d47e39d190effcfcdd34c8a23b6e8bb5 514 Pfam PF13007 Transposase C of IS166 homeodomain 42 112 2.2E-14 T 12-10-2018 IPR024463 Transposase TnpC, homeodomain M892_05000 d47e39d190effcfcdd34c8a23b6e8bb5 514 Pfam PF13817 IS66 C-terminal element 474 510 7.6E-8 T 12-10-2018 IPR039552 Transposase IS66, C-terminal M892_18995 cf445ea418fdcc81953872b9f9ed0ae4 337 SUPERFAMILY SSF55073 183 335 7.22E-43 T 12-10-2018 IPR029787 Nucleotide cyclase M892_18995 cf445ea418fdcc81953872b9f9ed0ae4 337 Gene3D G3DSA:3.30.70.270 164 336 4.2E-49 T 12-10-2018 M892_18995 cf445ea418fdcc81953872b9f9ed0ae4 337 SMART SM00267 167 337 6.3E-47 T 12-10-2018 IPR000160 GGDEF domain M892_18995 cf445ea418fdcc81953872b9f9ed0ae4 337 Pfam PF00990 Diguanylate cyclase, GGDEF domain 178 333 3.3E-40 T 12-10-2018 IPR000160 GGDEF domain M892_18995 cf445ea418fdcc81953872b9f9ed0ae4 337 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 175 334 8.6E-42 T 12-10-2018 IPR000160 GGDEF domain M892_00645 1b6e6b9879a2f47bac750a0410b8c425 581 Gene3D G3DSA:1.20.1730.10 25 506 3.9E-111 T 12-10-2018 IPR038377 Sodium/glucose symporter superfamily M892_00645 1b6e6b9879a2f47bac750a0410b8c425 581 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 36 434 7.7E-75 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 M892_00645 1b6e6b9879a2f47bac750a0410b8c425 581 Pfam PF00474 Sodium:solute symporter family 36 432 3.1E-55 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 M892_24335 cfde87bf6ac89df4bc8980f0aeb254ea 331 SUPERFAMILY SSF52317 1 155 7.78E-46 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M892_24335 cfde87bf6ac89df4bc8980f0aeb254ea 331 Pfam PF02016 LD-carboxypeptidase 13 318 1.7E-70 T 12-10-2018 IPR003507 Peptidase family S66 M892_24335 cfde87bf6ac89df4bc8980f0aeb254ea 331 Gene3D G3DSA:3.40.50.10740 1 161 1.8E-60 T 12-10-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal M892_24335 cfde87bf6ac89df4bc8980f0aeb254ea 331 Gene3D G3DSA:3.50.30.60 165 330 3.8E-48 T 12-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily M892_24335 cfde87bf6ac89df4bc8980f0aeb254ea 331 PIRSF PIRSF028757 1 330 4.5E-89 T 12-10-2018 IPR003507 Peptidase family S66 M892_24335 cfde87bf6ac89df4bc8980f0aeb254ea 331 SUPERFAMILY SSF141986 172 324 1.44E-37 T 12-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily M892_08725 aabaf732ec81ec4b29dcb6c6e63f2e25 610 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 610 2.2E-257 T 12-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 M892_08725 aabaf732ec81ec4b29dcb6c6e63f2e25 610 Gene3D G3DSA:3.40.50.10490 448 595 2.5E-144 T 12-10-2018 M892_08725 aabaf732ec81ec4b29dcb6c6e63f2e25 610 Pfam PF01380 SIS domain 463 592 3.5E-24 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 M892_08725 aabaf732ec81ec4b29dcb6c6e63f2e25 610 Pfam PF01380 SIS domain 290 419 1.2E-32 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 M892_08725 aabaf732ec81ec4b29dcb6c6e63f2e25 610 SUPERFAMILY SSF53697 245 610 1.21E-112 T 12-10-2018 M892_08725 aabaf732ec81ec4b29dcb6c6e63f2e25 610 Pfam PF13522 Glutamine amidotransferase domain 55 174 3.0E-22 T 12-10-2018 M892_08725 aabaf732ec81ec4b29dcb6c6e63f2e25 610 Gene3D G3DSA:3.60.20.10 2 241 1.7E-81 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal M892_08725 aabaf732ec81ec4b29dcb6c6e63f2e25 610 Gene3D G3DSA:3.40.50.10490 249 609 2.5E-144 T 12-10-2018 M892_08725 aabaf732ec81ec4b29dcb6c6e63f2e25 610 SUPERFAMILY SSF56235 2 234 3.35E-75 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal M892_08725 aabaf732ec81ec4b29dcb6c6e63f2e25 610 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 610 40.179 T 12-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 M892_15590 67b49dffee6364ab51821d46327d411b 368 SMART SM00448 20 132 1.1E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_15590 67b49dffee6364ab51821d46327d411b 368 Gene3D G3DSA:3.40.50.2300 8 148 1.5E-36 T 12-10-2018 M892_15590 67b49dffee6364ab51821d46327d411b 368 Pfam PF00072 Response regulator receiver domain 22 132 2.7E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_15590 67b49dffee6364ab51821d46327d411b 368 SUPERFAMILY SSF52172 20 137 1.32E-35 T 12-10-2018 IPR011006 CheY-like superfamily M892_15590 67b49dffee6364ab51821d46327d411b 368 Gene3D G3DSA:3.60.40.10 164 364 3.0E-6 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 M892_19445 5bdcc4921eede261fea11596f913d9b8 246 ProSitePatterns PS00894 DeoR-type HTH domain signature. 4 38 - T 12-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 M892_19445 5bdcc4921eede261fea11596f913d9b8 246 SMART SM00420 4 56 5.7E-20 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 M892_19445 5bdcc4921eede261fea11596f913d9b8 246 SMART SM01134 67 227 6.3E-47 T 12-10-2018 M892_19445 5bdcc4921eede261fea11596f913d9b8 246 Gene3D G3DSA:1.10.10.10 1 52 7.6E-7 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_19445 5bdcc4921eede261fea11596f913d9b8 246 SUPERFAMILY SSF46785 2 59 2.62E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_19445 5bdcc4921eede261fea11596f913d9b8 246 Pfam PF08220 DeoR-like helix-turn-helix domain 4 59 9.6E-17 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 M892_19445 5bdcc4921eede261fea11596f913d9b8 246 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 22 36 2.0E-6 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 M892_19445 5bdcc4921eede261fea11596f913d9b8 246 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 36 54 2.0E-6 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 M892_19445 5bdcc4921eede261fea11596f913d9b8 246 SUPERFAMILY SSF100950 70 226 4.29E-24 T 12-10-2018 IPR037171 NagB/RpiA transferase-like M892_19445 5bdcc4921eede261fea11596f913d9b8 246 Pfam PF00455 DeoR C terminal sensor domain 72 226 6.9E-41 T 12-10-2018 IPR014036 DeoR C-terminal sensor domain M892_12045 0d27b2bf5bfbe13c7c46318812a80f17 372 Gene3D G3DSA:3.40.50.300 121 294 7.0E-50 T 12-10-2018 M892_12045 0d27b2bf5bfbe13c7c46318812a80f17 372 Gene3D G3DSA:1.10.40.50 295 369 3.6E-25 T 12-10-2018 M892_12045 0d27b2bf5bfbe13c7c46318812a80f17 372 SUPERFAMILY SSF52540 132 356 2.2E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_12045 0d27b2bf5bfbe13c7c46318812a80f17 372 Gene3D G3DSA:2.40.50.140 54 120 1.3E-21 T 12-10-2018 M892_12045 0d27b2bf5bfbe13c7c46318812a80f17 372 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 93 353 1.6E-92 T 12-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 M892_12045 0d27b2bf5bfbe13c7c46318812a80f17 372 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 59 359 37.84 T 12-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 M892_12045 0d27b2bf5bfbe13c7c46318812a80f17 372 Pfam PF03193 RsgA GTPase 118 295 5.2E-58 T 12-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 M892_18695 94970e08f615114b99a5569b91c92558 221 Gene3D G3DSA:1.10.10.10 120 220 9.7E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_18695 94970e08f615114b99a5569b91c92558 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 142 214 1.6E-17 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M892_18695 94970e08f615114b99a5569b91c92558 221 Gene3D G3DSA:3.40.50.2300 1 119 9.6E-35 T 12-10-2018 M892_18695 94970e08f615114b99a5569b91c92558 221 SMART SM00862 139 215 5.1E-14 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M892_18695 94970e08f615114b99a5569b91c92558 221 SUPERFAMILY SSF46894 141 215 6.24E-18 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M892_18695 94970e08f615114b99a5569b91c92558 221 Pfam PF00072 Response regulator receiver domain 4 112 8.1E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_18695 94970e08f615114b99a5569b91c92558 221 SUPERFAMILY SSF52172 2 130 8.11E-39 T 12-10-2018 IPR011006 CheY-like superfamily M892_18695 94970e08f615114b99a5569b91c92558 221 SMART SM00448 2 112 7.4E-38 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_14715 28da52b6a8deb52396f0c661eb5d374d 102 SUPERFAMILY SSF82657 1 88 9.42E-31 T 12-10-2018 IPR036065 BolA-like superfamily M892_14715 28da52b6a8deb52396f0c661eb5d374d 102 Pfam PF01722 BolA-like protein 10 83 2.7E-29 T 12-10-2018 IPR002634 BolA protein M892_14715 28da52b6a8deb52396f0c661eb5d374d 102 Gene3D G3DSA:3.30.300.90 1 89 2.0E-34 T 12-10-2018 M892_14715 28da52b6a8deb52396f0c661eb5d374d 102 PIRSF PIRSF003113 1 99 5.3E-37 T 12-10-2018 IPR002634 BolA protein M892_00730 30d75f4debc1e71c19b84095cedeac97 568 SMART SM00052 314 560 3.5E-69 T 12-10-2018 IPR001633 EAL domain M892_00730 30d75f4debc1e71c19b84095cedeac97 568 Gene3D G3DSA:3.30.70.270 145 315 1.5E-20 T 12-10-2018 M892_00730 30d75f4debc1e71c19b84095cedeac97 568 Pfam PF08447 PAS fold 45 115 6.7E-14 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 M892_00730 30d75f4debc1e71c19b84095cedeac97 568 SUPERFAMILY SSF55785 27 137 1.62E-18 T 12-10-2018 IPR035965 PAS domain superfamily M892_00730 30d75f4debc1e71c19b84095cedeac97 568 Pfam PF00990 Diguanylate cyclase, GGDEF domain 146 299 3.7E-15 T 12-10-2018 IPR000160 GGDEF domain M892_00730 30d75f4debc1e71c19b84095cedeac97 568 SMART SM00267 135 304 6.7E-8 T 12-10-2018 IPR000160 GGDEF domain M892_00730 30d75f4debc1e71c19b84095cedeac97 568 Gene3D G3DSA:3.30.450.20 35 138 1.1E-18 T 12-10-2018 M892_00730 30d75f4debc1e71c19b84095cedeac97 568 Pfam PF00563 EAL domain 322 555 1.9E-64 T 12-10-2018 IPR001633 EAL domain M892_00730 30d75f4debc1e71c19b84095cedeac97 568 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 21 139 9.9E-13 T 12-10-2018 IPR000014 PAS domain M892_00730 30d75f4debc1e71c19b84095cedeac97 568 SUPERFAMILY SSF141868 319 564 2.62E-73 T 12-10-2018 IPR035919 EAL domain superfamily M892_00730 30d75f4debc1e71c19b84095cedeac97 568 SMART SM00091 22 88 3.5E-4 T 12-10-2018 IPR000014 PAS domain M892_00730 30d75f4debc1e71c19b84095cedeac97 568 SMART SM00086 95 135 4.9E-4 T 12-10-2018 IPR001610 PAC motif M892_00730 30d75f4debc1e71c19b84095cedeac97 568 Gene3D G3DSA:3.20.20.450 316 566 2.6E-79 T 12-10-2018 IPR035919 EAL domain superfamily M892_00730 30d75f4debc1e71c19b84095cedeac97 568 SUPERFAMILY SSF55073 153 306 4.47E-18 T 12-10-2018 IPR029787 Nucleotide cyclase M892_06890 1d928766fa8aaa7fb7716e9e7e20fb4a 267 Pfam PF03330 Lytic transglycolase 84 173 1.3E-28 T 12-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain M892_06890 1d928766fa8aaa7fb7716e9e7e20fb4a 267 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 12 176 25.473 T 12-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 M892_06890 1d928766fa8aaa7fb7716e9e7e20fb4a 267 Pfam PF05036 Sporulation related domain 190 260 1.6E-10 T 12-10-2018 IPR007730 Sporulation-like domain GO:0042834 M892_06890 1d928766fa8aaa7fb7716e9e7e20fb4a 267 Gene3D G3DSA:2.40.40.10 83 177 3.3E-39 T 12-10-2018 IPR036908 RlpA-like domain superfamily M892_06890 1d928766fa8aaa7fb7716e9e7e20fb4a 267 SUPERFAMILY SSF110997 190 261 3.27E-12 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 M892_06890 1d928766fa8aaa7fb7716e9e7e20fb4a 267 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 86 251 6.7E-48 T 12-10-2018 IPR012997 Rare lipoprotein A M892_06890 1d928766fa8aaa7fb7716e9e7e20fb4a 267 SUPERFAMILY SSF50685 88 175 2.16E-11 T 12-10-2018 IPR036908 RlpA-like domain superfamily M892_13300 a19ec1e00f63a216352ee4dbcf59338e 386 PRINTS PR00477 Phosphoglycerate kinase family signature 303 328 3.3E-82 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_13300 a19ec1e00f63a216352ee4dbcf59338e 386 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 3.3E-82 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_13300 a19ec1e00f63a216352ee4dbcf59338e 386 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 3.3E-82 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_13300 a19ec1e00f63a216352ee4dbcf59338e 386 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 3.3E-82 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_13300 a19ec1e00f63a216352ee4dbcf59338e 386 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 3.3E-82 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_13300 a19ec1e00f63a216352ee4dbcf59338e 386 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 3.3E-82 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_13300 a19ec1e00f63a216352ee4dbcf59338e 386 PRINTS PR00477 Phosphoglycerate kinase family signature 336 347 3.3E-82 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_13300 a19ec1e00f63a216352ee4dbcf59338e 386 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 3.3E-82 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_13300 a19ec1e00f63a216352ee4dbcf59338e 386 PRINTS PR00477 Phosphoglycerate kinase family signature 359 376 3.3E-82 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_13300 a19ec1e00f63a216352ee4dbcf59338e 386 PIRSF PIRSF000724 1 386 3.3E-134 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_13300 a19ec1e00f63a216352ee4dbcf59338e 386 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 383 38.078 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_13300 a19ec1e00f63a216352ee4dbcf59338e 386 SUPERFAMILY SSF53748 3 382 1.88E-143 T 12-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_13300 a19ec1e00f63a216352ee4dbcf59338e 386 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 12-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_13300 a19ec1e00f63a216352ee4dbcf59338e 386 Pfam PF00162 Phosphoglycerate kinase 6 373 3.2E-138 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_13300 a19ec1e00f63a216352ee4dbcf59338e 386 Gene3D G3DSA:3.40.50.1260 165 373 2.3E-150 T 12-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_13300 a19ec1e00f63a216352ee4dbcf59338e 386 Gene3D G3DSA:3.40.50.1260 10 379 2.3E-150 T 12-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_21995 c23e62149e3d7a4786a8b3c75606397d 260 Gene3D G3DSA:2.40.420.20 158 256 3.9E-12 T 12-10-2018 M892_21995 c23e62149e3d7a4786a8b3c75606397d 260 Gene3D G3DSA:2.40.50.100 57 90 6.6E-14 T 12-10-2018 M892_21995 c23e62149e3d7a4786a8b3c75606397d 260 Gene3D G3DSA:2.40.30.170 44 56 6.6E-14 T 12-10-2018 M892_21995 c23e62149e3d7a4786a8b3c75606397d 260 Pfam PF13533 Biotin-lipoyl like 57 104 3.9E-10 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain M892_21995 c23e62149e3d7a4786a8b3c75606397d 260 SUPERFAMILY SSF111369 46 111 3.14E-7 T 12-10-2018 M892_21995 c23e62149e3d7a4786a8b3c75606397d 260 Gene3D G3DSA:1.10.287.470 91 110 6.6E-14 T 12-10-2018 M892_10695 ea2c17236364148e0fe335b8e19e4f31 507 SUPERFAMILY SSF52540 188 501 3.69E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_10695 ea2c17236364148e0fe335b8e19e4f31 507 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 1.7E-48 T 12-10-2018 M892_10695 ea2c17236364148e0fe335b8e19e4f31 507 Gene3D G3DSA:3.30.230.10 1 167 2.4E-6 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M892_10695 ea2c17236364148e0fe335b8e19e4f31 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 289 303 3.2E-6 T 12-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 M892_10695 ea2c17236364148e0fe335b8e19e4f31 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 341 353 3.2E-6 T 12-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 M892_10695 ea2c17236364148e0fe335b8e19e4f31 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 209 224 3.2E-6 T 12-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 M892_10695 ea2c17236364148e0fe335b8e19e4f31 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 317 330 3.2E-6 T 12-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 M892_10695 ea2c17236364148e0fe335b8e19e4f31 507 Pfam PF01078 Magnesium chelatase, subunit ChlI 190 391 9.5E-90 T 12-10-2018 IPR000523 Magnesium chelatase ChlI domain M892_10695 ea2c17236364148e0fe335b8e19e4f31 507 SUPERFAMILY SSF54211 2 169 3.07E-30 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold M892_10695 ea2c17236364148e0fe335b8e19e4f31 507 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 401 493 4.6E-30 T 12-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain M892_10695 ea2c17236364148e0fe335b8e19e4f31 507 SMART SM00382 210 390 1.6E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_10695 ea2c17236364148e0fe335b8e19e4f31 507 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 493 3.8E-211 T 12-10-2018 IPR004482 Mg chelatase-related protein M892_10695 ea2c17236364148e0fe335b8e19e4f31 507 Gene3D G3DSA:3.40.50.300 190 499 1.1E-55 T 12-10-2018 M892_26935 1e06784b8cf109b6933b0a18d07a7768 726 PIRSF PIRSF009393 1 726 1.4E-286 T 12-10-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 M892_26935 1e06784b8cf109b6933b0a18d07a7768 726 SUPERFAMILY SSF55904 578 725 6.28E-44 T 12-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 M892_26935 1e06784b8cf109b6933b0a18d07a7768 726 Gene3D G3DSA:3.90.100.10 608 726 6.6E-41 T 12-10-2018 M892_26935 1e06784b8cf109b6933b0a18d07a7768 726 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 117 557 4.1E-187 T 12-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 M892_26935 1e06784b8cf109b6933b0a18d07a7768 726 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 358 372 - T 12-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 M892_26935 1e06784b8cf109b6933b0a18d07a7768 726 TIGRFAM TIGR04301 ODC_inducible: ornithine decarboxylase SpeF 1 725 0.0 T 12-10-2018 IPR027568 Ornithine decarboxylase SpeF GO:0004586 KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 M892_26935 1e06784b8cf109b6933b0a18d07a7768 726 Gene3D G3DSA:3.40.640.10 117 427 1.2E-83 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M892_26935 1e06784b8cf109b6933b0a18d07a7768 726 SUPERFAMILY SSF52172 1 116 2.29E-24 T 12-10-2018 IPR011006 CheY-like superfamily M892_26935 1e06784b8cf109b6933b0a18d07a7768 726 SUPERFAMILY SSF53383 117 574 6.38E-117 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M892_26935 1e06784b8cf109b6933b0a18d07a7768 726 Gene3D G3DSA:3.90.1150.10 429 607 8.7E-68 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M892_26935 1e06784b8cf109b6933b0a18d07a7768 726 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 583 711 2.4E-46 T 12-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 M892_26935 1e06784b8cf109b6933b0a18d07a7768 726 Gene3D G3DSA:3.40.50.220 22 116 8.6E-13 T 12-10-2018 IPR027464 Ornithine decarboxylase, N-terminal KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 M892_26935 1e06784b8cf109b6933b0a18d07a7768 726 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 28 111 2.7E-13 T 12-10-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 M892_27755 7df292b2f408361ae930067318987dee 641 SMART SM00387 355 471 1.3E-39 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_27755 7df292b2f408361ae930067318987dee 641 Gene3D G3DSA:1.10.287.130 209 306 4.0E-29 T 12-10-2018 M892_27755 7df292b2f408361ae930067318987dee 641 SMART SM00448 509 623 1.6E-31 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_27755 7df292b2f408361ae930067318987dee 641 Gene3D G3DSA:3.30.565.10 307 474 9.4E-52 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_27755 7df292b2f408361ae930067318987dee 641 Pfam PF17149 Periplasmic sensor domain found in signal transduction proteins 40 145 9.1E-16 T 12-10-2018 IPR033414 Periplasmic sensor domain M892_27755 7df292b2f408361ae930067318987dee 641 Pfam PF00512 His Kinase A (phospho-acceptor) domain 244 308 1.6E-19 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M892_27755 7df292b2f408361ae930067318987dee 641 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 355 470 2.2E-31 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_27755 7df292b2f408361ae930067318987dee 641 PRINTS PR00344 Bacterial sensor protein C-terminal signature 396 410 2.2E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_27755 7df292b2f408361ae930067318987dee 641 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 449 2.2E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_27755 7df292b2f408361ae930067318987dee 641 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 424 2.2E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_27755 7df292b2f408361ae930067318987dee 641 PRINTS PR00344 Bacterial sensor protein C-terminal signature 455 468 2.2E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_27755 7df292b2f408361ae930067318987dee 641 SUPERFAMILY SSF55874 297 469 2.36E-48 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_27755 7df292b2f408361ae930067318987dee 641 SUPERFAMILY SSF47384 229 309 9.02E-22 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M892_27755 7df292b2f408361ae930067318987dee 641 Pfam PF00072 Response regulator receiver domain 511 622 5.0E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_27755 7df292b2f408361ae930067318987dee 641 Gene3D G3DSA:3.40.50.2300 495 628 2.4E-40 T 12-10-2018 M892_27755 7df292b2f408361ae930067318987dee 641 SMART SM00388 243 308 7.0E-24 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M892_27755 7df292b2f408361ae930067318987dee 641 SUPERFAMILY SSF52172 508 634 2.28E-36 T 12-10-2018 IPR011006 CheY-like superfamily M892_09110 e8b2fa34d117e41896678b4dde01c2be 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 1.7E-53 T 12-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_09110 e8b2fa34d117e41896678b4dde01c2be 118 Gene3D G3DSA:4.10.910.10 72 118 1.3E-26 T 12-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_09110 e8b2fa34d117e41896678b4dde01c2be 118 SUPERFAMILY SSF46946 2 114 4.42E-45 T 12-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 M892_09110 e8b2fa34d117e41896678b4dde01c2be 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 3.4E-32 T 12-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_09110 e8b2fa34d117e41896678b4dde01c2be 118 PIRSF PIRSF002134 1 118 4.1E-41 T 12-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_09110 e8b2fa34d117e41896678b4dde01c2be 118 Gene3D G3DSA:1.10.8.50 1 71 5.4E-28 T 12-10-2018 M892_09110 e8b2fa34d117e41896678b4dde01c2be 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 27.075 T 12-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_09110 e8b2fa34d117e41896678b4dde01c2be 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 12-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_20070 382c59668073528d35b6a0f1ffebd0bd 286 SUPERFAMILY SSF47616 116 258 1.5E-31 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily M892_20070 382c59668073528d35b6a0f1ffebd0bd 286 Gene3D G3DSA:1.20.1050.10 132 248 2.3E-110 T 12-10-2018 M892_20070 382c59668073528d35b6a0f1ffebd0bd 286 Pfam PF13410 Glutathione S-transferase, C-terminal domain 176 244 7.5E-9 T 12-10-2018 M892_20070 382c59668073528d35b6a0f1ffebd0bd 286 Pfam PF02798 Glutathione S-transferase, N-terminal domain 64 126 2.1E-6 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 M892_20070 382c59668073528d35b6a0f1ffebd0bd 286 SUPERFAMILY SSF52833 38 131 1.46E-15 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M892_20070 382c59668073528d35b6a0f1ffebd0bd 286 Gene3D G3DSA:3.40.30.10 17 254 2.3E-110 T 12-10-2018 M892_07625 9ef414d8e49267b9b6ade86f7cc8fd07 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 12-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 M892_07625 9ef414d8e49267b9b6ade86f7cc8fd07 107 Gene3D G3DSA:2.60.300.12 2 107 4.6E-38 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 M892_07625 9ef414d8e49267b9b6ade86f7cc8fd07 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 1.4E-37 T 12-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 M892_07625 9ef414d8e49267b9b6ade86f7cc8fd07 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 9.5E-26 T 12-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 M892_07625 9ef414d8e49267b9b6ade86f7cc8fd07 107 SUPERFAMILY SSF89360 1 96 1.83E-34 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 M892_07625 9ef414d8e49267b9b6ade86f7cc8fd07 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 1.7E-56 T 12-10-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 M892_05220 9e28d7c40765e5413a8a43a65ca63efb 334 SUPERFAMILY SSF53822 60 331 6.87E-95 T 12-10-2018 IPR028082 Periplasmic binding protein-like I M892_05220 9e28d7c40765e5413a8a43a65ca63efb 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.1E-20 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M892_05220 9e28d7c40765e5413a8a43a65ca63efb 334 SMART SM00354 1 71 3.8E-38 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M892_05220 9e28d7c40765e5413a8a43a65ca63efb 334 Pfam PF13377 Periplasmic binding protein-like domain 170 330 1.5E-43 T 12-10-2018 M892_05220 9e28d7c40765e5413a8a43a65ca63efb 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.0E-6 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M892_05220 9e28d7c40765e5413a8a43a65ca63efb 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.0E-6 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M892_05220 9e28d7c40765e5413a8a43a65ca63efb 334 Gene3D G3DSA:3.40.50.2300 69 322 3.0E-92 T 12-10-2018 M892_05220 9e28d7c40765e5413a8a43a65ca63efb 334 SUPERFAMILY SSF47413 1 59 1.06E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 M892_05220 9e28d7c40765e5413a8a43a65ca63efb 334 Hamap MF_01277 HTH-type transcriptional repressor PurR [purR]. 1 334 62.594 T 12-10-2018 IPR023588 Transcription regulator HTH, PurR GO:0006355 M892_05220 9e28d7c40765e5413a8a43a65ca63efb 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 12-10-2018 M892_05220 9e28d7c40765e5413a8a43a65ca63efb 334 Gene3D G3DSA:1.10.260.40 3 59 1.3E-24 T 12-10-2018 M892_05220 9e28d7c40765e5413a8a43a65ca63efb 334 Gene3D G3DSA:3.40.50.2300 161 323 3.0E-92 T 12-10-2018 M892_08760 6c30189714629a6d6e37a21d86b780ed 602 Gene3D G3DSA:3.40.50.12780 319 459 1.0E-33 T 12-10-2018 M892_08760 6c30189714629a6d6e37a21d86b780ed 602 ProSitePatterns PS00455 Putative AMP-binding domain signature. 183 194 - T 12-10-2018 IPR020845 AMP-binding, conserved site M892_08760 6c30189714629a6d6e37a21d86b780ed 602 Pfam PF00501 AMP-binding enzyme 13 466 3.0E-100 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 M892_08760 6c30189714629a6d6e37a21d86b780ed 602 Gene3D G3DSA:3.40.50.12780 3 314 1.1E-51 T 12-10-2018 M892_08760 6c30189714629a6d6e37a21d86b780ed 602 SUPERFAMILY SSF56801 7 596 1.31E-114 T 12-10-2018 M892_20655 8eb85cca994280ff46bdde1e34a96fb6 322 Gene3D G3DSA:2.40.160.10 22 322 3.8E-59 T 12-10-2018 IPR023614 Porin domain superfamily M892_20655 8eb85cca994280ff46bdde1e34a96fb6 322 SUPERFAMILY SSF56935 22 322 6.23E-50 T 12-10-2018 M892_20655 8eb85cca994280ff46bdde1e34a96fb6 322 Pfam PF13609 Gram-negative porin 8 297 2.0E-27 T 12-10-2018 M892_26190 72be0d3f98aaae458e7b035a6594931b 775 Gene3D G3DSA:3.20.20.450 524 773 3.7E-94 T 12-10-2018 IPR035919 EAL domain superfamily M892_26190 72be0d3f98aaae458e7b035a6594931b 775 Gene3D G3DSA:3.30.70.270 342 523 1.5E-59 T 12-10-2018 M892_26190 72be0d3f98aaae458e7b035a6594931b 775 Pfam PF00990 Diguanylate cyclase, GGDEF domain 348 504 5.1E-49 T 12-10-2018 IPR000160 GGDEF domain M892_26190 72be0d3f98aaae458e7b035a6594931b 775 SUPERFAMILY SSF55073 353 511 7.3E-53 T 12-10-2018 IPR029787 Nucleotide cyclase M892_26190 72be0d3f98aaae458e7b035a6594931b 775 Pfam PF00563 EAL domain 525 759 4.9E-69 T 12-10-2018 IPR001633 EAL domain M892_26190 72be0d3f98aaae458e7b035a6594931b 775 SMART SM00267 337 509 4.8E-59 T 12-10-2018 IPR000160 GGDEF domain M892_26190 72be0d3f98aaae458e7b035a6594931b 775 SMART SM00052 519 764 1.5E-105 T 12-10-2018 IPR001633 EAL domain M892_26190 72be0d3f98aaae458e7b035a6594931b 775 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 345 506 8.2E-45 T 12-10-2018 IPR000160 GGDEF domain M892_26190 72be0d3f98aaae458e7b035a6594931b 775 SUPERFAMILY SSF141868 524 772 3.92E-84 T 12-10-2018 IPR035919 EAL domain superfamily M892_11610 2ac0d077f44fe59621085fdde2a8df1d 132 Pfam PF13411 MerR HTH family regulatory protein 3 68 1.5E-17 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 M892_11610 2ac0d077f44fe59621085fdde2a8df1d 132 SUPERFAMILY SSF46955 2 121 7.33E-34 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily M892_11610 2ac0d077f44fe59621085fdde2a8df1d 132 TIGRFAM TIGR02043 ZntR: Zn(II)-responsive transcriptional regulator 1 132 1.0E-68 T 12-10-2018 IPR011788 Zn(II)-responsive transcriptional regulator GO:0003677|GO:0006351|GO:0008270 M892_11610 2ac0d077f44fe59621085fdde2a8df1d 132 SMART SM00422 2 71 8.8E-30 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 M892_11610 2ac0d077f44fe59621085fdde2a8df1d 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 1.7E-11 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 M892_11610 2ac0d077f44fe59621085fdde2a8df1d 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 1.7E-11 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 M892_11610 2ac0d077f44fe59621085fdde2a8df1d 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 1.7E-11 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 M892_11610 2ac0d077f44fe59621085fdde2a8df1d 132 Gene3D G3DSA:1.10.1660.10 1 130 1.7E-36 T 12-10-2018 M892_20910 9d97da8181f513b27e0880aa552a7292 512 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 234 506 5.4E-61 T 12-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 M892_20910 9d97da8181f513b27e0880aa552a7292 512 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 229 511 21.792 T 12-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 M892_20910 9d97da8181f513b27e0880aa552a7292 512 SUPERFAMILY SSF64153 8 250 9.68E-66 T 12-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 M892_20910 9d97da8181f513b27e0880aa552a7292 512 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 12 213 4.7E-53 T 12-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 M892_20910 9d97da8181f513b27e0880aa552a7292 512 Gene3D G3DSA:3.40.50.10260 5 219 3.0E-60 T 12-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 M892_20910 9d97da8181f513b27e0880aa552a7292 512 Gene3D G3DSA:3.40.1190.20 224 508 2.4E-81 T 12-10-2018 IPR029056 Ribokinase-like M892_20910 9d97da8181f513b27e0880aa552a7292 512 SUPERFAMILY SSF53613 230 506 3.43E-72 T 12-10-2018 IPR029056 Ribokinase-like M892_20910 9d97da8181f513b27e0880aa552a7292 512 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 11 214 24.05 T 12-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 M892_20910 9d97da8181f513b27e0880aa552a7292 512 Pfam PF01256 Carbohydrate kinase 253 501 1.2E-52 T 12-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 M892_20910 9d97da8181f513b27e0880aa552a7292 512 PIRSF PIRSF017184 7 511 1.8E-135 T 12-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 M892_20910 9d97da8181f513b27e0880aa552a7292 512 Pfam PF03853 YjeF-related protein N-terminus 32 193 1.9E-44 T 12-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 M892_20910 9d97da8181f513b27e0880aa552a7292 512 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 446 456 - T 12-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site M892_15360 d5ea8184111d2d403cf05754e7179b8f 371 Pfam PF01339 CheB methylesterase 186 363 3.3E-58 T 12-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 M892_15360 d5ea8184111d2d403cf05754e7179b8f 371 Gene3D G3DSA:3.40.50.180 178 367 2.1E-64 T 12-10-2018 IPR035909 Methylesterase CheB, C-terminal M892_15360 d5ea8184111d2d403cf05754e7179b8f 371 SUPERFAMILY SSF52172 2 109 7.12E-27 T 12-10-2018 IPR011006 CheY-like superfamily M892_15360 d5ea8184111d2d403cf05754e7179b8f 371 Pfam PF00072 Response regulator receiver domain 5 109 1.6E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_15360 d5ea8184111d2d403cf05754e7179b8f 371 SMART SM00448 3 126 9.2E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_15360 d5ea8184111d2d403cf05754e7179b8f 371 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 3 369 38.722 T 12-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 M892_15360 d5ea8184111d2d403cf05754e7179b8f 371 SUPERFAMILY SSF52738 180 365 1.83E-62 T 12-10-2018 IPR035909 Methylesterase CheB, C-terminal M892_15360 d5ea8184111d2d403cf05754e7179b8f 371 PIRSF PIRSF000876 1 369 3.6E-127 T 12-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 M892_15360 d5ea8184111d2d403cf05754e7179b8f 371 Gene3D G3DSA:3.40.50.2300 2 130 1.5E-31 T 12-10-2018 M892_15340 48735712ad2819a28718e631de0fe8a2 245 Pfam PF04545 Sigma-70, region 4 188 235 2.7E-19 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 M892_15340 48735712ad2819a28718e631de0fe8a2 245 Gene3D G3DSA:1.10.1740.10 5 89 2.3E-28 T 12-10-2018 M892_15340 48735712ad2819a28718e631de0fe8a2 245 SUPERFAMILY SSF88659 156 240 1.61E-20 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like M892_15340 48735712ad2819a28718e631de0fe8a2 245 PRINTS PR00046 Major sigma-70 factor signature 223 234 3.9E-12 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 M892_15340 48735712ad2819a28718e631de0fe8a2 245 PRINTS PR00046 Major sigma-70 factor signature 191 203 3.9E-12 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 M892_15340 48735712ad2819a28718e631de0fe8a2 245 PRINTS PR00046 Major sigma-70 factor signature 208 223 3.9E-12 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 M892_15340 48735712ad2819a28718e631de0fe8a2 245 PRINTS PR00046 Major sigma-70 factor signature 47 60 3.9E-12 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 M892_15340 48735712ad2819a28718e631de0fe8a2 245 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 20 239 2.9E-86 T 12-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 M892_15340 48735712ad2819a28718e631de0fe8a2 245 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 18 238 7.6E-33 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 M892_15340 48735712ad2819a28718e631de0fe8a2 245 Pfam PF04542 Sigma-70 region 2 20 92 2.3E-16 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 M892_15340 48735712ad2819a28718e631de0fe8a2 245 Gene3D G3DSA:1.20.140.160 91 240 2.2E-45 T 12-10-2018 M892_15340 48735712ad2819a28718e631de0fe8a2 245 SUPERFAMILY SSF88946 7 92 1.44E-24 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 M892_15340 48735712ad2819a28718e631de0fe8a2 245 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 8 241 62.725 T 12-10-2018 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 M892_15340 48735712ad2819a28718e631de0fe8a2 245 SUPERFAMILY SSF88659 93 165 2.05E-15 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like M892_15340 48735712ad2819a28718e631de0fe8a2 245 Pfam PF04539 Sigma-70 region 3 101 162 2.7E-11 T 12-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 M892_15340 48735712ad2819a28718e631de0fe8a2 245 PIRSF PIRSF000770 1 244 1.1E-37 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 M892_22800 dd542c16476abb5c3d63db777c79c9f2 119 Pfam PF06950 Protein of unknown function (DUF1293) 1 115 2.1E-72 T 12-10-2018 IPR009712 Vibrio phage Vf33, Vpf117 M892_01810 dd542c16476abb5c3d63db777c79c9f2 119 Pfam PF06950 Protein of unknown function (DUF1293) 1 115 2.1E-72 T 12-10-2018 IPR009712 Vibrio phage Vf33, Vpf117 M892_22770 f61872a946811f2b53d4b3c3c40baabd 103 Pfam PF01253 Translation initiation factor SUI1 27 96 1.7E-19 T 12-10-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 M892_22770 f61872a946811f2b53d4b3c3c40baabd 103 SUPERFAMILY SSF55159 3 99 9.29E-27 T 12-10-2018 IPR036877 SUI1 domain superfamily GO:0003743|GO:0006413 M892_22770 f61872a946811f2b53d4b3c3c40baabd 103 TIGRFAM TIGR01158 SUI1_rel: putative translation initiation factor SUI1 3 103 4.9E-39 T 12-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 M892_22770 f61872a946811f2b53d4b3c3c40baabd 103 PIRSF PIRSF037511 1 103 3.4E-33 T 12-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 M892_22770 f61872a946811f2b53d4b3c3c40baabd 103 Gene3D G3DSA:3.30.780.10 23 103 2.1E-33 T 12-10-2018 M892_21585 bbb70221184648d17973e0c3d1d1d671 411 SUPERFAMILY SSF103473 19 404 1.16E-30 T 12-10-2018 IPR036259 MFS transporter superfamily M892_21585 bbb70221184648d17973e0c3d1d1d671 411 Gene3D G3DSA:1.20.1250.20 15 402 4.5E-22 T 12-10-2018 M892_21585 bbb70221184648d17973e0c3d1d1d671 411 Pfam PF07690 Major Facilitator Superfamily 19 367 3.4E-20 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 M892_07360 08bc0abee46bb48219f31a65e18fb5ad 56 Gene3D G3DSA:1.10.1660.10 2 54 1.3E-9 T 12-10-2018 M892_07360 08bc0abee46bb48219f31a65e18fb5ad 56 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 6 52 6.7E-16 T 12-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 M892_07360 08bc0abee46bb48219f31a65e18fb5ad 56 Pfam PF12728 Helix-turn-helix domain 6 54 2.5E-20 T 12-10-2018 M892_07360 08bc0abee46bb48219f31a65e18fb5ad 56 SUPERFAMILY SSF46955 5 54 1.48E-8 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily M892_03680 dbc44c0ea40b6967114ec897f23107b6 155 Gene3D G3DSA:3.40.630.30 2 152 6.7E-14 T 12-10-2018 M892_03680 dbc44c0ea40b6967114ec897f23107b6 155 Pfam PF00583 Acetyltransferase (GNAT) family 24 133 1.4E-6 T 12-10-2018 IPR000182 GNAT domain M892_03680 dbc44c0ea40b6967114ec897f23107b6 155 SUPERFAMILY SSF55729 1 135 6.73E-14 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_27540 8615ae8d8a66d83d96b7f507bd438551 637 Gene3D G3DSA:3.30.450.20 61 285 5.2E-60 T 12-10-2018 M892_27540 8615ae8d8a66d83d96b7f507bd438551 637 SMART SM00387 502 627 3.3E-23 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_27540 8615ae8d8a66d83d96b7f507bd438551 637 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 504 625 2.5E-16 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_27540 8615ae8d8a66d83d96b7f507bd438551 637 Gene3D G3DSA:1.10.287.130 354 453 4.9E-14 T 12-10-2018 M892_27540 8615ae8d8a66d83d96b7f507bd438551 637 SUPERFAMILY SSF47384 375 455 3.34E-7 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M892_27540 8615ae8d8a66d83d96b7f507bd438551 637 SUPERFAMILY SSF55874 466 599 1.7E-27 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_27540 8615ae8d8a66d83d96b7f507bd438551 637 PRINTS PR00344 Bacterial sensor protein C-terminal signature 560 570 4.9E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_27540 8615ae8d8a66d83d96b7f507bd438551 637 PRINTS PR00344 Bacterial sensor protein C-terminal signature 571 589 4.9E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_27540 8615ae8d8a66d83d96b7f507bd438551 637 PRINTS PR00344 Bacterial sensor protein C-terminal signature 542 556 4.9E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_27540 8615ae8d8a66d83d96b7f507bd438551 637 Pfam PF02743 Cache domain 54 233 2.8E-14 T 12-10-2018 IPR033479 Double Cache domain 1 M892_27540 8615ae8d8a66d83d96b7f507bd438551 637 Gene3D G3DSA:3.30.565.10 462 627 4.8E-30 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_27540 8615ae8d8a66d83d96b7f507bd438551 637 SUPERFAMILY SSF103190 71 199 1.16E-19 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily M892_27540 8615ae8d8a66d83d96b7f507bd438551 637 PIRSF PIRSF036431 10 634 2.0E-183 T 12-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) M892_27540 8615ae8d8a66d83d96b7f507bd438551 637 Gene3D G3DSA:3.30.450.20 73 191 5.2E-60 T 12-10-2018 M892_01270 92267ed34466d87ac17d52fac6e09b33 541 SUPERFAMILY SSF55874 421 536 1.83E-21 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_01270 92267ed34466d87ac17d52fac6e09b33 541 Gene3D G3DSA:3.30.450.20 201 312 2.5E-22 T 12-10-2018 M892_01270 92267ed34466d87ac17d52fac6e09b33 541 Pfam PF00989 PAS fold 217 279 5.4E-7 T 12-10-2018 IPR013767 PAS fold GO:0006355 M892_01270 92267ed34466d87ac17d52fac6e09b33 541 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 322 374 7.4E-9 T 12-10-2018 IPR039506 SpoOB, alpha-helical domain M892_01270 92267ed34466d87ac17d52fac6e09b33 541 SMART SM00091 215 281 9.7E-5 T 12-10-2018 IPR000014 PAS domain M892_01270 92267ed34466d87ac17d52fac6e09b33 541 SMART SM00387 420 539 9.9E-15 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_01270 92267ed34466d87ac17d52fac6e09b33 541 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 423 538 2.2E-14 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_01270 92267ed34466d87ac17d52fac6e09b33 541 SUPERFAMILY SSF55785 217 308 2.62E-11 T 12-10-2018 IPR035965 PAS domain superfamily M892_01270 92267ed34466d87ac17d52fac6e09b33 541 SUPERFAMILY SSF55890 324 392 1.57E-9 T 12-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 M892_01270 92267ed34466d87ac17d52fac6e09b33 541 Gene3D G3DSA:3.30.450.20 37 166 2.2E-39 T 12-10-2018 M892_01270 92267ed34466d87ac17d52fac6e09b33 541 Gene3D G3DSA:3.30.565.10 384 541 2.6E-21 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_01270 92267ed34466d87ac17d52fac6e09b33 541 SUPERFAMILY SSF103190 42 171 2.63E-34 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily M892_01270 92267ed34466d87ac17d52fac6e09b33 541 PRINTS PR00344 Bacterial sensor protein C-terminal signature 499 517 1.0E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_01270 92267ed34466d87ac17d52fac6e09b33 541 PRINTS PR00344 Bacterial sensor protein C-terminal signature 523 536 1.0E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_01270 92267ed34466d87ac17d52fac6e09b33 541 PRINTS PR00344 Bacterial sensor protein C-terminal signature 468 482 1.0E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_01270 92267ed34466d87ac17d52fac6e09b33 541 Pfam PF17203 Single cache domain 3 38 170 6.4E-19 T 12-10-2018 IPR033463 Single cache domain 3 M892_01280 fe54ff00a53d824afdf4019985fea1c7 526 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 207 213 - T 12-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 M892_01280 fe54ff00a53d824afdf4019985fea1c7 526 PIRSF PIRSF000110 17 515 3.2E-179 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 M892_01280 fe54ff00a53d824afdf4019985fea1c7 526 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 32 513 85.228 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 M892_01280 fe54ff00a53d824afdf4019985fea1c7 526 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 219 512 1.2E-114 T 12-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 M892_01280 fe54ff00a53d824afdf4019985fea1c7 526 Gene3D G3DSA:3.40.50.720 30 205 2.7E-60 T 12-10-2018 M892_01280 fe54ff00a53d824afdf4019985fea1c7 526 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 249 266 1.9E-49 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 M892_01280 fe54ff00a53d824afdf4019985fea1c7 526 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 358 384 1.9E-49 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 M892_01280 fe54ff00a53d824afdf4019985fea1c7 526 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 197 225 1.9E-49 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 M892_01280 fe54ff00a53d824afdf4019985fea1c7 526 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 267 283 1.9E-49 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 M892_01280 fe54ff00a53d824afdf4019985fea1c7 526 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 173 186 1.9E-49 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 M892_01280 fe54ff00a53d824afdf4019985fea1c7 526 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 36 217 7.8E-65 T 12-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 M892_01280 fe54ff00a53d824afdf4019985fea1c7 526 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 32 512 6.6E-203 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 M892_01280 fe54ff00a53d824afdf4019985fea1c7 526 SUPERFAMILY SSF51735 24 220 6.04E-63 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_01280 fe54ff00a53d824afdf4019985fea1c7 526 Gene3D G3DSA:3.30.360.10 206 514 3.2E-124 T 12-10-2018 M892_01280 fe54ff00a53d824afdf4019985fea1c7 526 SUPERFAMILY SSF55347 207 515 1.01E-112 T 12-10-2018 M892_12545 babbcdf54d3e73ede6a1baa5b6a5ee9f 366 Gene3D G3DSA:3.20.20.10 18 225 7.6E-134 T 12-10-2018 IPR029066 PLP-binding barrel M892_12545 babbcdf54d3e73ede6a1baa5b6a5ee9f 366 Gene3D G3DSA:2.40.37.10 16 360 7.6E-134 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 M892_12545 babbcdf54d3e73ede6a1baa5b6a5ee9f 366 SUPERFAMILY SSF51419 16 242 4.06E-72 T 12-10-2018 IPR029066 PLP-binding barrel M892_12545 babbcdf54d3e73ede6a1baa5b6a5ee9f 366 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 39 49 - T 12-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 M892_12545 babbcdf54d3e73ede6a1baa5b6a5ee9f 366 PRINTS PR00992 Alanine racemase signature 68 86 7.2E-72 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 M892_12545 babbcdf54d3e73ede6a1baa5b6a5ee9f 366 PRINTS PR00992 Alanine racemase signature 257 272 7.2E-72 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 M892_12545 babbcdf54d3e73ede6a1baa5b6a5ee9f 366 PRINTS PR00992 Alanine racemase signature 274 289 7.2E-72 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 M892_12545 babbcdf54d3e73ede6a1baa5b6a5ee9f 366 PRINTS PR00992 Alanine racemase signature 128 140 7.2E-72 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 M892_12545 babbcdf54d3e73ede6a1baa5b6a5ee9f 366 PRINTS PR00992 Alanine racemase signature 200 227 7.2E-72 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 M892_12545 babbcdf54d3e73ede6a1baa5b6a5ee9f 366 PRINTS PR00992 Alanine racemase signature 295 312 7.2E-72 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 M892_12545 babbcdf54d3e73ede6a1baa5b6a5ee9f 366 PRINTS PR00992 Alanine racemase signature 347 360 7.2E-72 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 M892_12545 babbcdf54d3e73ede6a1baa5b6a5ee9f 366 PRINTS PR00992 Alanine racemase signature 34 50 7.2E-72 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 M892_12545 babbcdf54d3e73ede6a1baa5b6a5ee9f 366 PRINTS PR00992 Alanine racemase signature 163 174 7.2E-72 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 M892_12545 babbcdf54d3e73ede6a1baa5b6a5ee9f 366 Pfam PF00842 Alanine racemase, C-terminal domain 241 364 2.8E-42 T 12-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 M892_12545 babbcdf54d3e73ede6a1baa5b6a5ee9f 366 SUPERFAMILY SSF50621 234 364 2.13E-47 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 M892_12545 babbcdf54d3e73ede6a1baa5b6a5ee9f 366 TIGRFAM TIGR00492 alr: alanine racemase 11 364 7.2E-131 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 M892_12545 babbcdf54d3e73ede6a1baa5b6a5ee9f 366 SMART SM01005 241 365 9.3E-67 T 12-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 M892_12545 babbcdf54d3e73ede6a1baa5b6a5ee9f 366 Pfam PF01168 Alanine racemase, N-terminal domain 16 227 2.2E-71 T 12-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 M892_12545 babbcdf54d3e73ede6a1baa5b6a5ee9f 366 Hamap MF_01201 Alanine racemase. 9 365 35.32 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 M892_14760 a13eecf0120861b0119a37b2bf3797d0 459 Gene3D G3DSA:3.90.350.10 66 347 8.8E-80 T 12-10-2018 IPR014736 Transposase, Tn5-like, core M892_14760 a13eecf0120861b0119a37b2bf3797d0 459 Pfam PF01609 Transposase DDE domain 223 357 3.7E-5 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_14760 a13eecf0120861b0119a37b2bf3797d0 459 Gene3D G3DSA:1.10.740.10 348 458 1.7E-41 T 12-10-2018 IPR014737 Transposase, Tn5-like, C-terminal M892_14760 a13eecf0120861b0119a37b2bf3797d0 459 SUPERFAMILY SSF53098 1 458 5.23E-131 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_14760 a13eecf0120861b0119a37b2bf3797d0 459 Pfam PF02281 Transposase Tn5 dimerisation domain 369 454 1.9E-17 T 12-10-2018 IPR003201 Transposase Tn5, dimerisation M892_14760 a13eecf0120861b0119a37b2bf3797d0 459 Pfam PF14706 Transposase DNA-binding 9 65 5.0E-17 T 12-10-2018 IPR014735 Transposase, Tn5-like, N-terminal M892_14760 a13eecf0120861b0119a37b2bf3797d0 459 Gene3D G3DSA:1.10.246.40 1 65 9.7E-25 T 12-10-2018 IPR038215 Transposase, Tn5-like, N-terminal domain superfamily M892_07305 a13eecf0120861b0119a37b2bf3797d0 459 Gene3D G3DSA:3.90.350.10 66 347 8.8E-80 T 12-10-2018 IPR014736 Transposase, Tn5-like, core M892_07305 a13eecf0120861b0119a37b2bf3797d0 459 Pfam PF01609 Transposase DDE domain 223 357 3.7E-5 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_07305 a13eecf0120861b0119a37b2bf3797d0 459 Gene3D G3DSA:1.10.740.10 348 458 1.7E-41 T 12-10-2018 IPR014737 Transposase, Tn5-like, C-terminal M892_07305 a13eecf0120861b0119a37b2bf3797d0 459 SUPERFAMILY SSF53098 1 458 5.23E-131 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_07305 a13eecf0120861b0119a37b2bf3797d0 459 Pfam PF02281 Transposase Tn5 dimerisation domain 369 454 1.9E-17 T 12-10-2018 IPR003201 Transposase Tn5, dimerisation M892_07305 a13eecf0120861b0119a37b2bf3797d0 459 Pfam PF14706 Transposase DNA-binding 9 65 5.0E-17 T 12-10-2018 IPR014735 Transposase, Tn5-like, N-terminal M892_07305 a13eecf0120861b0119a37b2bf3797d0 459 Gene3D G3DSA:1.10.246.40 1 65 9.7E-25 T 12-10-2018 IPR038215 Transposase, Tn5-like, N-terminal domain superfamily M892_23040 a13eecf0120861b0119a37b2bf3797d0 459 Gene3D G3DSA:3.90.350.10 66 347 8.8E-80 T 12-10-2018 IPR014736 Transposase, Tn5-like, core M892_23040 a13eecf0120861b0119a37b2bf3797d0 459 Pfam PF01609 Transposase DDE domain 223 357 3.7E-5 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_23040 a13eecf0120861b0119a37b2bf3797d0 459 Gene3D G3DSA:1.10.740.10 348 458 1.7E-41 T 12-10-2018 IPR014737 Transposase, Tn5-like, C-terminal M892_23040 a13eecf0120861b0119a37b2bf3797d0 459 SUPERFAMILY SSF53098 1 458 5.23E-131 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_23040 a13eecf0120861b0119a37b2bf3797d0 459 Pfam PF02281 Transposase Tn5 dimerisation domain 369 454 1.9E-17 T 12-10-2018 IPR003201 Transposase Tn5, dimerisation M892_23040 a13eecf0120861b0119a37b2bf3797d0 459 Pfam PF14706 Transposase DNA-binding 9 65 5.0E-17 T 12-10-2018 IPR014735 Transposase, Tn5-like, N-terminal M892_23040 a13eecf0120861b0119a37b2bf3797d0 459 Gene3D G3DSA:1.10.246.40 1 65 9.7E-25 T 12-10-2018 IPR038215 Transposase, Tn5-like, N-terminal domain superfamily M892_12035 a13eecf0120861b0119a37b2bf3797d0 459 Gene3D G3DSA:3.90.350.10 66 347 8.8E-80 T 12-10-2018 IPR014736 Transposase, Tn5-like, core M892_12035 a13eecf0120861b0119a37b2bf3797d0 459 Pfam PF01609 Transposase DDE domain 223 357 3.7E-5 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_12035 a13eecf0120861b0119a37b2bf3797d0 459 Gene3D G3DSA:1.10.740.10 348 458 1.7E-41 T 12-10-2018 IPR014737 Transposase, Tn5-like, C-terminal M892_12035 a13eecf0120861b0119a37b2bf3797d0 459 SUPERFAMILY SSF53098 1 458 5.23E-131 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_12035 a13eecf0120861b0119a37b2bf3797d0 459 Pfam PF02281 Transposase Tn5 dimerisation domain 369 454 1.9E-17 T 12-10-2018 IPR003201 Transposase Tn5, dimerisation M892_12035 a13eecf0120861b0119a37b2bf3797d0 459 Pfam PF14706 Transposase DNA-binding 9 65 5.0E-17 T 12-10-2018 IPR014735 Transposase, Tn5-like, N-terminal M892_12035 a13eecf0120861b0119a37b2bf3797d0 459 Gene3D G3DSA:1.10.246.40 1 65 9.7E-25 T 12-10-2018 IPR038215 Transposase, Tn5-like, N-terminal domain superfamily M892_21315 cc9577150b899bac9753dfe593306de0 128 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 M892_21315 cc9577150b899bac9753dfe593306de0 128 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 127 1.7E-61 T 12-10-2018 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 M892_21315 cc9577150b899bac9753dfe593306de0 128 Pfam PF13411 MerR HTH family regulatory protein 1 67 6.9E-17 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 M892_21315 cc9577150b899bac9753dfe593306de0 128 SMART SM00422 1 70 4.7E-25 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 M892_21315 cc9577150b899bac9753dfe593306de0 128 SUPERFAMILY SSF46955 1 126 6.11E-33 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily M892_21315 cc9577150b899bac9753dfe593306de0 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 9.0E-8 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 M892_21315 cc9577150b899bac9753dfe593306de0 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 9.0E-8 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 M892_21315 cc9577150b899bac9753dfe593306de0 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 9.0E-8 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 M892_21315 cc9577150b899bac9753dfe593306de0 128 Gene3D G3DSA:1.10.1660.10 1 125 6.8E-32 T 12-10-2018 M892_03890 811c95033703c5782f3ec2b77d65946c 579 Gene3D G3DSA:3.20.20.70 190 495 1.0E-92 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M892_03890 811c95033703c5782f3ec2b77d65946c 579 SUPERFAMILY SSF51445 196 534 1.96E-76 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily M892_03890 811c95033703c5782f3ec2b77d65946c 579 Pfam PF02065 Melibiase 158 352 1.5E-18 T 12-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 M892_06535 ee43c1a5aead97ff10056905437f530e 396 SUPERFAMILY SSF64518 1 396 1.44E-66 T 12-10-2018 M892_06535 ee43c1a5aead97ff10056905437f530e 396 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 4 396 1.3E-92 T 12-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 M892_06535 ee43c1a5aead97ff10056905437f530e 396 Gene3D G3DSA:1.20.1330.10 265 371 1.6E-9 T 12-10-2018 M892_06535 ee43c1a5aead97ff10056905437f530e 396 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 142 1.3E-11 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 M892_06535 ee43c1a5aead97ff10056905437f530e 396 Pfam PF00700 Bacterial flagellin C-terminal helical region 318 396 1.2E-4 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 M892_06535 ee43c1a5aead97ff10056905437f530e 396 Gene3D G3DSA:1.20.1330.10 42 221 4.4E-33 T 12-10-2018 M892_23940 dc42bec0265ef9adfbd3a98f6480fb0a 504 PIRSF PIRSF036685 2 500 1.4E-182 T 12-10-2018 IPR012189 Peptidase M28E, aminopeptidase AP1 M892_23940 dc42bec0265ef9adfbd3a98f6480fb0a 504 Pfam PF04389 Peptidase family M28 189 379 2.8E-33 T 12-10-2018 IPR007484 Peptidase M28 M892_23940 dc42bec0265ef9adfbd3a98f6480fb0a 504 Gene3D G3DSA:3.40.630.10 106 398 3.9E-81 T 12-10-2018 M892_23940 dc42bec0265ef9adfbd3a98f6480fb0a 504 SUPERFAMILY SSF53187 108 390 6.01E-61 T 12-10-2018 M892_23940 dc42bec0265ef9adfbd3a98f6480fb0a 504 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 419 476 6.9E-6 T 12-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial M892_23940 dc42bec0265ef9adfbd3a98f6480fb0a 504 Gene3D G3DSA:2.60.120.380 400 499 4.1E-21 T 12-10-2018 M892_11210 84a010b0d4f5685ded0c5e7d858baee0 333 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 323 5.7E-120 T 12-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_11210 84a010b0d4f5685ded0c5e7d858baee0 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 108 121 7.1E-29 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_11210 84a010b0d4f5685ded0c5e7d858baee0 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 7.1E-29 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_11210 84a010b0d4f5685ded0c5e7d858baee0 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 7.1E-29 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_11210 84a010b0d4f5685ded0c5e7d858baee0 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 7.1E-29 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_11210 84a010b0d4f5685ded0c5e7d858baee0 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 7.1E-29 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_11210 84a010b0d4f5685ded0c5e7d858baee0 333 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 313 2.0E-59 T 12-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_11210 84a010b0d4f5685ded0c5e7d858baee0 333 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 12-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_11210 84a010b0d4f5685ded0c5e7d858baee0 333 SUPERFAMILY SSF51735 1 173 2.75E-53 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_11210 84a010b0d4f5685ded0c5e7d858baee0 333 SMART SM00846 3 152 8.1E-71 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_11210 84a010b0d4f5685ded0c5e7d858baee0 333 Gene3D G3DSA:3.30.360.10 151 315 6.8E-127 T 12-10-2018 M892_11210 84a010b0d4f5685ded0c5e7d858baee0 333 PIRSF PIRSF000149 1 332 2.6E-114 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_11210 84a010b0d4f5685ded0c5e7d858baee0 333 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 101 4.5E-31 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_11210 84a010b0d4f5685ded0c5e7d858baee0 333 SUPERFAMILY SSF55347 152 314 2.56E-63 T 12-10-2018 M892_11210 84a010b0d4f5685ded0c5e7d858baee0 333 Gene3D G3DSA:3.40.50.720 4 327 6.8E-127 T 12-10-2018 M892_20165 dd707c3edde3afb8c578db68f93c1898 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 1.4E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M892_20165 dd707c3edde3afb8c578db68f93c1898 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 1.4E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M892_20165 dd707c3edde3afb8c578db68f93c1898 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 1.4E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M892_20165 dd707c3edde3afb8c578db68f93c1898 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 1.4E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M892_20165 dd707c3edde3afb8c578db68f93c1898 138 SUPERFAMILY SSF46785 6 136 2.73E-31 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_20165 dd707c3edde3afb8c578db68f93c1898 138 SMART SM00347 24 124 1.4E-22 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M892_20165 dd707c3edde3afb8c578db68f93c1898 138 Pfam PF01047 MarR family 32 88 3.5E-15 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M892_20165 dd707c3edde3afb8c578db68f93c1898 138 Gene3D G3DSA:1.10.10.10 1 137 1.1E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_14795 24e34b8d0ed61822ea7765f18dc172ee 846 Gene3D G3DSA:3.20.20.80 522 842 8.9E-76 T 12-10-2018 M892_14795 24e34b8d0ed61822ea7765f18dc172ee 846 Pfam PF00704 Glycosyl hydrolases family 18 525 825 5.0E-24 T 12-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 M892_14795 24e34b8d0ed61822ea7765f18dc172ee 846 ProSitePatterns PS01095 Chitinases family 18 active site. 637 645 - T 12-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 M892_14795 24e34b8d0ed61822ea7765f18dc172ee 846 SMART SM00495 28 74 6.5E-10 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 M892_14795 24e34b8d0ed61822ea7765f18dc172ee 846 SMART SM00495 277 326 0.014 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 M892_14795 24e34b8d0ed61822ea7765f18dc172ee 846 SUPERFAMILY SSF51055 17 78 5.89E-14 T 12-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 M892_14795 24e34b8d0ed61822ea7765f18dc172ee 846 Gene3D G3DSA:2.60.40.10 335 427 1.4E-23 T 12-10-2018 IPR013783 Immunoglobulin-like fold M892_14795 24e34b8d0ed61822ea7765f18dc172ee 846 Gene3D G3DSA:2.60.40.10 84 175 1.4E-20 T 12-10-2018 IPR013783 Immunoglobulin-like fold M892_14795 24e34b8d0ed61822ea7765f18dc172ee 846 Gene3D G3DSA:2.60.40.10 179 271 2.9E-22 T 12-10-2018 IPR013783 Immunoglobulin-like fold M892_14795 24e34b8d0ed61822ea7765f18dc172ee 846 SMART SM00636 523 825 3.9E-4 T 12-10-2018 IPR011583 Chitinase II GO:0008061 M892_14795 24e34b8d0ed61822ea7765f18dc172ee 846 Gene3D G3DSA:2.60.40.10 429 521 2.1E-20 T 12-10-2018 IPR013783 Immunoglobulin-like fold M892_14795 24e34b8d0ed61822ea7765f18dc172ee 846 SUPERFAMILY SSF51445 522 833 2.66E-47 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily M892_14795 24e34b8d0ed61822ea7765f18dc172ee 846 Gene3D G3DSA:2.10.10.20 11 79 3.9E-12 T 12-10-2018 M892_08865 98ce6ed3011d0d138e7117ce38d3d1cb 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 2.0E-18 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_08865 98ce6ed3011d0d138e7117ce38d3d1cb 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 29.456 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_08865 98ce6ed3011d0d138e7117ce38d3d1cb 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 12-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_08865 98ce6ed3011d0d138e7117ce38d3d1cb 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 2.7E-39 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_08865 98ce6ed3011d0d138e7117ce38d3d1cb 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 2.7E-39 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_08865 98ce6ed3011d0d138e7117ce38d3d1cb 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 2.7E-39 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_08865 98ce6ed3011d0d138e7117ce38d3d1cb 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 1.4E-43 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_08865 98ce6ed3011d0d138e7117ce38d3d1cb 85 Gene3D G3DSA:2.40.50.100 21 85 1.1E-31 T 12-10-2018 M892_08865 98ce6ed3011d0d138e7117ce38d3d1cb 85 Pfam PF01016 Ribosomal L27 protein 2 82 9.4E-40 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_08865 98ce6ed3011d0d138e7117ce38d3d1cb 85 SUPERFAMILY SSF110324 2 80 1.01E-34 T 12-10-2018 M892_12195 63a246614a5e3573bcdb1e86c9c3b41b 228 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 9 223 1.7E-61 T 12-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 M892_12195 63a246614a5e3573bcdb1e86c9c3b41b 228 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 82 194 1.4E-10 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M892_12195 63a246614a5e3573bcdb1e86c9c3b41b 228 Gene3D G3DSA:1.10.150.240 21 94 5.4E-64 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 M892_12195 63a246614a5e3573bcdb1e86c9c3b41b 228 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 108 121 1.3E-8 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M892_12195 63a246614a5e3573bcdb1e86c9c3b41b 228 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 139 155 1.3E-8 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M892_12195 63a246614a5e3573bcdb1e86c9c3b41b 228 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 157 177 1.3E-8 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M892_12195 63a246614a5e3573bcdb1e86c9c3b41b 228 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 6 17 1.3E-8 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M892_12195 63a246614a5e3573bcdb1e86c9c3b41b 228 SUPERFAMILY SSF56784 5 224 7.76E-60 T 12-10-2018 IPR036412 HAD-like superfamily M892_12195 63a246614a5e3573bcdb1e86c9c3b41b 228 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 193 4.3E-39 T 12-10-2018 M892_12195 63a246614a5e3573bcdb1e86c9c3b41b 228 Gene3D G3DSA:3.40.50.1000 9 216 5.4E-64 T 12-10-2018 IPR023214 HAD superfamily M892_12195 63a246614a5e3573bcdb1e86c9c3b41b 228 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 98 189 6.7E-10 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M892_12195 63a246614a5e3573bcdb1e86c9c3b41b 228 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 82 193 2.1E-14 T 12-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 M892_12195 63a246614a5e3573bcdb1e86c9c3b41b 228 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 6 225 35.467 T 12-10-2018 IPR037512 Phosphoglycolate phosphatase, prokaryotic GO:0005975|GO:0008967 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 M892_07920 b7a3bb3d65b8c83bafb80782797686f0 648 SUPERFAMILY SSF53955 484 639 1.13E-45 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily M892_07920 b7a3bb3d65b8c83bafb80782797686f0 648 Gene3D G3DSA:1.25.20.10 33 394 4.4E-101 T 12-10-2018 M892_07920 b7a3bb3d65b8c83bafb80782797686f0 648 Pfam PF01464 Transglycosylase SLT domain 489 600 4.9E-29 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 M892_07920 b7a3bb3d65b8c83bafb80782797686f0 648 Pfam PF14718 Soluble lytic murein transglycosylase L domain 411 476 5.3E-22 T 12-10-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 M892_07920 b7a3bb3d65b8c83bafb80782797686f0 648 Gene3D G3DSA:1.10.1240.20 408 476 1.1E-19 T 12-10-2018 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily GO:0004553|GO:0042597 M892_07920 b7a3bb3d65b8c83bafb80782797686f0 648 SUPERFAMILY SSF48435 33 481 4.18E-128 T 12-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 M892_07920 b7a3bb3d65b8c83bafb80782797686f0 648 Gene3D G3DSA:1.10.530.10 477 648 3.1E-48 T 12-10-2018 M892_25135 8c18561fa021912d7deaf8cd3ce61b2c 368 Pfam PF01553 Acyltransferase 92 202 6.8E-9 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 M892_25135 8c18561fa021912d7deaf8cd3ce61b2c 368 SUPERFAMILY SSF69593 83 317 2.75E-10 T 12-10-2018 M892_02925 05c7be28715c6f9cb1262ec6e5b8553b 514 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 8 506 1.1E-213 T 12-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 M892_02925 05c7be28715c6f9cb1262ec6e5b8553b 514 Gene3D G3DSA:1.10.275.10 5 200 7.2E-70 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal M892_02925 05c7be28715c6f9cb1262ec6e5b8553b 514 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 6 507 44.264 T 12-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 M892_02925 05c7be28715c6f9cb1262ec6e5b8553b 514 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 142 158 - T 12-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 M892_02925 05c7be28715c6f9cb1262ec6e5b8553b 514 SUPERFAMILY SSF48557 7 509 2.12E-191 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 M892_02925 05c7be28715c6f9cb1262ec6e5b8553b 514 Gene3D G3DSA:1.20.200.10 201 512 8.7E-122 T 12-10-2018 M892_02925 05c7be28715c6f9cb1262ec6e5b8553b 514 Pfam PF00221 Aromatic amino acid lyase 15 473 1.4E-187 T 12-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 M892_09315 d5a1db91fa617af12370c6ac1a72c592 388 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 378 1.5E-105 T 12-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 M892_09315 d5a1db91fa617af12370c6ac1a72c592 388 Gene3D G3DSA:3.40.50.720 1 193 8.6E-59 T 12-10-2018 M892_09315 d5a1db91fa617af12370c6ac1a72c592 388 Gene3D G3DSA:1.20.5.100 194 220 6.9E-20 T 12-10-2018 M892_09315 d5a1db91fa617af12370c6ac1a72c592 388 PIRSF PIRSF500134 1 343 1.8E-120 T 12-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 M892_09315 d5a1db91fa617af12370c6ac1a72c592 388 PIRSF PIRSF500134 338 388 0.012 T 12-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 M892_09315 d5a1db91fa617af12370c6ac1a72c592 388 SUPERFAMILY SSF48179 191 287 7.31E-31 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 M892_09315 d5a1db91fa617af12370c6ac1a72c592 388 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 168 7.4E-33 T 12-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 M892_09315 d5a1db91fa617af12370c6ac1a72c592 388 Gene3D G3DSA:3.40.50.720 222 388 1.2E-68 T 12-10-2018 M892_09315 d5a1db91fa617af12370c6ac1a72c592 388 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 301 375 9.0E-9 T 12-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 M892_09315 d5a1db91fa617af12370c6ac1a72c592 388 SUPERFAMILY SSF51735 1 194 8.39E-48 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_09315 d5a1db91fa617af12370c6ac1a72c592 388 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 192 281 2.5E-27 T 12-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 M892_09315 d5a1db91fa617af12370c6ac1a72c592 388 SUPERFAMILY SSF52413 283 387 2.62E-28 T 12-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 M892_09315 d5a1db91fa617af12370c6ac1a72c592 388 SMART SM00984 300 387 8.5E-14 T 12-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 M892_09315 d5a1db91fa617af12370c6ac1a72c592 388 PIRSF PIRSF000124 1 388 3.6E-136 T 12-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 M892_16265 98c41ea164a552fe827846ac1feaba3c 150 Pfam PF04217 Protein of unknown function, DUF412 8 146 7.0E-59 T 12-10-2018 IPR007334 Uncharacterised protein family UPF0208 M892_16265 98c41ea164a552fe827846ac1feaba3c 150 Hamap MF_01101 UPF0208 membrane protein YfbV [yfbV]. 5 150 35.92 T 12-10-2018 IPR007334 Uncharacterised protein family UPF0208 M892_18715 b24c58227e14c8041c0f7bc8d3359527 455 Pfam PF01618 MotA/TolQ/ExbB proton channel family 305 425 4.7E-31 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel M892_18715 b24c58227e14c8041c0f7bc8d3359527 455 PIRSF PIRSF037714 1 450 3.3E-155 T 12-10-2018 IPR017270 Putative MotA/TolQ/ExbB family protein M892_08675 4d178238024ba4887566ddb8dada494a 356 Gene3D G3DSA:1.10.443.10 147 339 3.8E-16 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 M892_08675 4d178238024ba4887566ddb8dada494a 356 Pfam PF00589 Phage integrase family 153 313 6.7E-11 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 M892_08675 4d178238024ba4887566ddb8dada494a 356 Gene3D G3DSA:1.10.150.130 29 146 1.4E-12 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal M892_08675 4d178238024ba4887566ddb8dada494a 356 SUPERFAMILY SSF56349 39 335 1.09E-44 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 M892_13625 83467f4b3ea375c697f1ac3dfc01a895 216 Gene3D G3DSA:3.40.50.2300 7 144 3.5E-23 T 12-10-2018 M892_13625 83467f4b3ea375c697f1ac3dfc01a895 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 206 8.1E-20 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_13625 83467f4b3ea375c697f1ac3dfc01a895 216 Gene3D G3DSA:1.10.10.10 146 212 1.2E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_13625 83467f4b3ea375c697f1ac3dfc01a895 216 SMART SM00421 150 207 2.5E-20 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_13625 83467f4b3ea375c697f1ac3dfc01a895 216 SUPERFAMILY SSF46894 141 211 1.33E-19 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M892_13625 83467f4b3ea375c697f1ac3dfc01a895 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 2.2E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_13625 83467f4b3ea375c697f1ac3dfc01a895 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 2.2E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_13625 83467f4b3ea375c697f1ac3dfc01a895 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 2.2E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_20825 b63667725ea594e6dfd4a056823f55e7 453 PIRSF PIRSF009414 1 453 5.1E-236 T 12-10-2018 IPR008670 Long-chain-fatty-acyl-CoA reductase, LuxC GO:0003995|GO:0008218|GO:0055114 KEGG: 00073+1.2.1.50|MetaCyc: PWY-7723 M892_20825 b63667725ea594e6dfd4a056823f55e7 453 SUPERFAMILY SSF53720 10 410 7.29E-30 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 M892_20825 b63667725ea594e6dfd4a056823f55e7 453 Pfam PF05893 Acyl-CoA reductase (LuxC) 26 418 2.8E-123 T 12-10-2018 IPR008670 Long-chain-fatty-acyl-CoA reductase, LuxC GO:0003995|GO:0008218|GO:0055114 KEGG: 00073+1.2.1.50|MetaCyc: PWY-7723 M892_20825 b63667725ea594e6dfd4a056823f55e7 453 Gene3D G3DSA:3.40.605.10 42 261 4.2E-6 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 M892_14895 8578637d7f413980efb940429855365b 281 Gene3D G3DSA:1.10.286.20 180 226 1.5E-39 T 12-10-2018 M892_14895 8578637d7f413980efb940429855365b 281 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 12-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 M892_14895 8578637d7f413980efb940429855365b 281 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 280 5.4E-103 T 12-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 M892_14895 8578637d7f413980efb940429855365b 281 SUPERFAMILY SSF46934 4 54 1.63E-17 T 12-10-2018 IPR009060 UBA-like superfamily GO:0005515 M892_14895 8578637d7f413980efb940429855365b 281 Gene3D G3DSA:1.10.8.10 1 56 2.0E-25 T 12-10-2018 M892_14895 8578637d7f413980efb940429855365b 281 Gene3D G3DSA:3.30.479.20 145 260 1.5E-39 T 12-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 M892_14895 8578637d7f413980efb940429855365b 281 Hamap MF_00050 Elongation factor Ts [tsf]. 1 280 75.035 T 12-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 M892_14895 8578637d7f413980efb940429855365b 281 SUPERFAMILY SSF54713 56 138 6.38E-18 T 12-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 M892_14895 8578637d7f413980efb940429855365b 281 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 12-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 M892_14895 8578637d7f413980efb940429855365b 281 SUPERFAMILY SSF54713 142 279 4.97E-45 T 12-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 M892_14895 8578637d7f413980efb940429855365b 281 Gene3D G3DSA:3.30.479.20 57 140 2.5E-25 T 12-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 M892_14895 8578637d7f413980efb940429855365b 281 Pfam PF00889 Elongation factor TS 71 261 1.8E-60 T 12-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 M892_16330 8d5bd0c85284b752c2b5cc3a94644969 686 Gene3D G3DSA:2.40.50.140 575 686 2.8E-34 T 12-10-2018 M892_16330 8d5bd0c85284b752c2b5cc3a94644969 686 Gene3D G3DSA:2.20.28.20 142 176 1.1E-161 T 12-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 M892_16330 8d5bd0c85284b752c2b5cc3a94644969 686 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 554 685 1.3E-46 T 12-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 M892_16330 8d5bd0c85284b752c2b5cc3a94644969 686 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 15 26 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 M892_16330 8d5bd0c85284b752c2b5cc3a94644969 686 Pfam PF01588 Putative tRNA binding domain 591 683 6.4E-26 T 12-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 M892_16330 8d5bd0c85284b752c2b5cc3a94644969 686 Hamap MF_00098 Methionine--tRNA ligase [metG]. 6 545 41.684 T 12-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 M892_16330 8d5bd0c85284b752c2b5cc3a94644969 686 SUPERFAMILY SSF52374 4 387 5.12E-102 T 12-10-2018 M892_16330 8d5bd0c85284b752c2b5cc3a94644969 686 SUPERFAMILY SSF50249 585 685 4.65E-32 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M892_16330 8d5bd0c85284b752c2b5cc3a94644969 686 PRINTS PR01041 Methionyl-tRNA synthetase signature 90 101 6.9E-25 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 M892_16330 8d5bd0c85284b752c2b5cc3a94644969 686 PRINTS PR01041 Methionyl-tRNA synthetase signature 251 262 6.9E-25 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 M892_16330 8d5bd0c85284b752c2b5cc3a94644969 686 PRINTS PR01041 Methionyl-tRNA synthetase signature 42 56 6.9E-25 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 M892_16330 8d5bd0c85284b752c2b5cc3a94644969 686 PRINTS PR01041 Methionyl-tRNA synthetase signature 291 306 6.9E-25 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 M892_16330 8d5bd0c85284b752c2b5cc3a94644969 686 PRINTS PR01041 Methionyl-tRNA synthetase signature 10 23 6.9E-25 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 M892_16330 8d5bd0c85284b752c2b5cc3a94644969 686 PRINTS PR01041 Methionyl-tRNA synthetase signature 384 395 6.9E-25 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 M892_16330 8d5bd0c85284b752c2b5cc3a94644969 686 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 9 535 9.8E-201 T 12-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 M892_16330 8d5bd0c85284b752c2b5cc3a94644969 686 Pfam PF09334 tRNA synthetases class I (M) 9 396 2.1E-165 T 12-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 M892_16330 8d5bd0c85284b752c2b5cc3a94644969 686 SUPERFAMILY SSF57770 142 176 5.62E-13 T 12-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 M892_16330 8d5bd0c85284b752c2b5cc3a94644969 686 Gene3D G3DSA:1.10.730.10 389 526 9.4E-35 T 12-10-2018 M892_16330 8d5bd0c85284b752c2b5cc3a94644969 686 SUPERFAMILY SSF47323 389 547 6.11E-45 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 M892_16330 8d5bd0c85284b752c2b5cc3a94644969 686 Gene3D G3DSA:3.40.50.620 9 384 1.1E-161 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M892_21375 1fe7d77a2237a506134660b3a0819d19 781 Pfam PF06934 Fatty acid cis/trans isomerase (CTI) 98 780 3.9E-296 T 12-10-2018 IPR010706 Fatty acid cis-trans isomerase M892_15520 4ebd86659e8c4a75bf9161e8a299a4ae 672 Gene3D G3DSA:3.40.50.150 7 253 2.8E-107 T 12-10-2018 M892_15520 4ebd86659e8c4a75bf9161e8a299a4ae 672 Pfam PF01266 FAD dependent oxidoreductase 266 636 1.0E-45 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 M892_15520 4ebd86659e8c4a75bf9161e8a299a4ae 672 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 116 242 2.0E-46 T 12-10-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 MetaCyc: PWY-7892 M892_15520 4ebd86659e8c4a75bf9161e8a299a4ae 672 Gene3D G3DSA:3.50.50.60 265 663 1.7E-132 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_15520 4ebd86659e8c4a75bf9161e8a299a4ae 672 SUPERFAMILY SSF51905 266 663 3.11E-28 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_15520 4ebd86659e8c4a75bf9161e8a299a4ae 672 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 266 666 4.8E-154 T 12-10-2018 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 M892_15520 4ebd86659e8c4a75bf9161e8a299a4ae 672 Gene3D G3DSA:3.30.9.10 349 573 1.7E-132 T 12-10-2018 M892_15520 4ebd86659e8c4a75bf9161e8a299a4ae 672 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 5 661 27.811 T 12-10-2018 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 M892_15440 5d636c7072863735725fafb46da1c69c 420 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 18 420 3.7E-119 T 12-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) M892_15440 5d636c7072863735725fafb46da1c69c 420 SUPERFAMILY SSF56935 27 420 1.42E-85 T 12-10-2018 M892_15440 5d636c7072863735725fafb46da1c69c 420 Gene3D G3DSA:2.40.160.60 27 420 4.1E-110 T 12-10-2018 M892_26630 e61606b89feaae780c82dc3b88da644f 225 SUPERFAMILY SSF53955 36 183 1.09E-36 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily M892_26630 e61606b89feaae780c82dc3b88da644f 225 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 70 98 - T 12-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 M892_26630 e61606b89feaae780c82dc3b88da644f 225 Pfam PF01464 Transglycosylase SLT domain 57 165 3.8E-29 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 M892_26630 e61606b89feaae780c82dc3b88da644f 225 Gene3D G3DSA:1.10.530.10 49 195 7.5E-34 T 12-10-2018 M892_21665 349836f57be487af450479b84f2c4520 346 Pfam PF13592 Winged helix-turn helix 98 154 2.3E-21 T 12-10-2018 IPR025959 Winged helix-turn helix domain M892_21665 349836f57be487af450479b84f2c4520 346 Gene3D G3DSA:3.30.420.470 136 342 1.7E-13 T 12-10-2018 M892_21665 349836f57be487af450479b84f2c4520 346 Pfam PF13358 DDE superfamily endonuclease 167 309 3.3E-35 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_21665 349836f57be487af450479b84f2c4520 346 Pfam PF13551 Winged helix-turn helix 32 84 5.0E-7 T 12-10-2018 M892_21665 349836f57be487af450479b84f2c4520 346 SUPERFAMILY SSF46689 15 131 6.57E-24 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_21665 349836f57be487af450479b84f2c4520 346 SUPERFAMILY SSF53098 223 306 7.28E-7 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_25830 349836f57be487af450479b84f2c4520 346 Pfam PF13592 Winged helix-turn helix 98 154 2.3E-21 T 12-10-2018 IPR025959 Winged helix-turn helix domain M892_25830 349836f57be487af450479b84f2c4520 346 Gene3D G3DSA:3.30.420.470 136 342 1.7E-13 T 12-10-2018 M892_25830 349836f57be487af450479b84f2c4520 346 Pfam PF13358 DDE superfamily endonuclease 167 309 3.3E-35 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_25830 349836f57be487af450479b84f2c4520 346 Pfam PF13551 Winged helix-turn helix 32 84 5.0E-7 T 12-10-2018 M892_25830 349836f57be487af450479b84f2c4520 346 SUPERFAMILY SSF46689 15 131 6.57E-24 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_25830 349836f57be487af450479b84f2c4520 346 SUPERFAMILY SSF53098 223 306 7.28E-7 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_07760 97fed438c787901e1f1ce3b0979e61d4 501 SUPERFAMILY SSF53067 136 308 1.78E-46 T 12-10-2018 M892_07760 97fed438c787901e1f1ce3b0979e61d4 501 PIRSF PIRSF001267 2 501 9.0E-201 T 12-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 M892_07760 97fed438c787901e1f1ce3b0979e61d4 501 SUPERFAMILY SSF53067 12 131 2.69E-36 T 12-10-2018 M892_07760 97fed438c787901e1f1ce3b0979e61d4 501 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 11 305 1.7E-100 T 12-10-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 M892_07760 97fed438c787901e1f1ce3b0979e61d4 501 Gene3D G3DSA:3.30.420.150 116 294 7.9E-90 T 12-10-2018 M892_07760 97fed438c787901e1f1ce3b0979e61d4 501 SUPERFAMILY SSF109604 312 500 7.85E-49 T 12-10-2018 M892_07760 97fed438c787901e1f1ce3b0979e61d4 501 Gene3D G3DSA:3.30.420.40 13 302 7.9E-90 T 12-10-2018 M892_07760 97fed438c787901e1f1ce3b0979e61d4 501 Gene3D G3DSA:1.10.3210.10 310 501 9.5E-60 T 12-10-2018 M892_07760 97fed438c787901e1f1ce3b0979e61d4 501 Pfam PF02541 Ppx/GppA phosphatase family 25 307 1.4E-85 T 12-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 M892_02190 b67558c3d069fa13d7a9a7645d868330 284 PRINTS PR01021 OMPA domain signature 167 189 5.3E-10 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M892_02190 b67558c3d069fa13d7a9a7645d868330 284 PRINTS PR01021 OMPA domain signature 197 212 5.3E-10 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M892_02190 b67558c3d069fa13d7a9a7645d868330 284 PRINTS PR01021 OMPA domain signature 212 228 5.3E-10 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M892_02190 b67558c3d069fa13d7a9a7645d868330 284 Gene3D G3DSA:3.30.1330.60 142 276 1.0E-29 T 12-10-2018 IPR036737 OmpA-like domain superfamily M892_02190 b67558c3d069fa13d7a9a7645d868330 284 SUPERFAMILY SSF103088 157 267 4.45E-31 T 12-10-2018 IPR036737 OmpA-like domain superfamily M892_02190 b67558c3d069fa13d7a9a7645d868330 284 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 250 270 5.6E-6 T 12-10-2018 M892_02190 b67558c3d069fa13d7a9a7645d868330 284 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 124 143 5.6E-6 T 12-10-2018 M892_02190 b67558c3d069fa13d7a9a7645d868330 284 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 230 249 5.6E-6 T 12-10-2018 M892_02190 b67558c3d069fa13d7a9a7645d868330 284 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 212 229 5.6E-6 T 12-10-2018 M892_02190 b67558c3d069fa13d7a9a7645d868330 284 Pfam PF00691 OmpA family 167 261 2.4E-22 T 12-10-2018 IPR006665 OmpA-like domain M892_00230 c9859da5b82f1db56ba4e323bfc391ec 219 Pfam PF00072 Response regulator receiver domain 3 112 1.2E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_00230 c9859da5b82f1db56ba4e323bfc391ec 219 Gene3D G3DSA:3.40.50.2300 1 122 1.3E-35 T 12-10-2018 M892_00230 c9859da5b82f1db56ba4e323bfc391ec 219 SUPERFAMILY SSF46894 119 217 1.05E-26 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M892_00230 c9859da5b82f1db56ba4e323bfc391ec 219 Gene3D G3DSA:1.10.10.10 123 219 3.2E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_00230 c9859da5b82f1db56ba4e323bfc391ec 219 SMART SM00862 145 216 4.2E-23 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M892_00230 c9859da5b82f1db56ba4e323bfc391ec 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 4.2E-22 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M892_00230 c9859da5b82f1db56ba4e323bfc391ec 219 SUPERFAMILY SSF52172 1 118 9.39E-36 T 12-10-2018 IPR011006 CheY-like superfamily M892_00230 c9859da5b82f1db56ba4e323bfc391ec 219 SMART SM00448 1 112 7.0E-34 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_27780 bc4097be2d29ae1a8de906cd6ecaab5d 349 Gene3D G3DSA:2.40.50.100 42 177 1.3E-19 T 12-10-2018 M892_27780 bc4097be2d29ae1a8de906cd6ecaab5d 349 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 41 270 2.2E-18 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain M892_27780 bc4097be2d29ae1a8de906cd6ecaab5d 349 Gene3D G3DSA:1.10.287.470 77 171 1.3E-19 T 12-10-2018 M892_27780 bc4097be2d29ae1a8de906cd6ecaab5d 349 SUPERFAMILY SSF111369 171 244 3.53E-6 T 12-10-2018 M892_27780 bc4097be2d29ae1a8de906cd6ecaab5d 349 Gene3D G3DSA:2.40.30.170 212 328 3.1E-18 T 12-10-2018 M892_27780 bc4097be2d29ae1a8de906cd6ecaab5d 349 SUPERFAMILY SSF111369 41 163 2.75E-13 T 12-10-2018 M892_22685 b73e9fa7eeef7fd9fe5c163ab62d2da1 399 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 3 80 3.8E-34 T 12-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 M892_22685 b73e9fa7eeef7fd9fe5c163ab62d2da1 399 SUPERFAMILY SSF51735 42 152 4.66E-5 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_22685 b73e9fa7eeef7fd9fe5c163ab62d2da1 399 Pfam PF07055 Enoyl reductase FAD binding domain 326 389 7.4E-25 T 12-10-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 M892_22685 b73e9fa7eeef7fd9fe5c163ab62d2da1 399 Gene3D G3DSA:3.40.50.720 1 397 1.0E-164 T 12-10-2018 M892_22685 b73e9fa7eeef7fd9fe5c163ab62d2da1 399 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 395 51.781 T 12-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 M892_22685 b73e9fa7eeef7fd9fe5c163ab62d2da1 399 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 84 319 7.6E-98 T 12-10-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 M892_06480 763e7d8aa6a5a283dc4bdb3f8ec88649 249 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 9 249 28.379 T 12-10-2018 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 M892_06480 763e7d8aa6a5a283dc4bdb3f8ec88649 249 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 15 231 1.2E-40 T 12-10-2018 M892_10915 9cba7ed421d48e1b26b693da0541b2e0 84 Gene3D G3DSA:3.10.20.30 19 84 8.7E-18 T 12-10-2018 IPR012675 Beta-grasp domain superfamily M892_10915 9cba7ed421d48e1b26b693da0541b2e0 84 Pfam PF02597 ThiS family 23 84 4.3E-12 T 12-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 M892_10915 9cba7ed421d48e1b26b693da0541b2e0 84 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 21 84 4.5E-16 T 12-10-2018 IPR010035 ThiS, thiamine-biosynthesis M892_10915 9cba7ed421d48e1b26b693da0541b2e0 84 SUPERFAMILY SSF54285 19 84 4.09E-14 T 12-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp M892_18475 dbf1e130cf0827710840bea8abac9f12 114 Pfam PF05717 IS66 Orf2 like protein 6 100 1.0E-32 T 12-10-2018 IPR008878 Transposase IS66, Orf2 M892_16590 dbf1e130cf0827710840bea8abac9f12 114 Pfam PF05717 IS66 Orf2 like protein 6 100 1.0E-32 T 12-10-2018 IPR008878 Transposase IS66, Orf2 M892_13490 c0ec7c96d5c7464d85246305176cd70c 242 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 14 236 42.266 T 12-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 M892_13490 c0ec7c96d5c7464d85246305176cd70c 242 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 112 119 - T 12-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 M892_13490 c0ec7c96d5c7464d85246305176cd70c 242 SUPERFAMILY SSF53448 16 237 1.19E-62 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M892_13490 c0ec7c96d5c7464d85246305176cd70c 242 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 16 237 2.5E-77 T 12-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 M892_13490 c0ec7c96d5c7464d85246305176cd70c 242 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 17 236 2.7E-77 T 12-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 M892_13490 c0ec7c96d5c7464d85246305176cd70c 242 Gene3D G3DSA:3.90.550.10 10 240 3.0E-75 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M892_12730 7fd395ab85ba1894be7523377543bad3 407 Gene3D G3DSA:1.20.81.30 62 176 7.3E-31 T 12-10-2018 M892_12730 7fd395ab85ba1894be7523377543bad3 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 3.9E-9 T 12-10-2018 IPR003004 GspF/PilC family M892_12730 7fd395ab85ba1894be7523377543bad3 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 385 404 3.9E-9 T 12-10-2018 IPR003004 GspF/PilC family M892_12730 7fd395ab85ba1894be7523377543bad3 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 369 383 3.9E-9 T 12-10-2018 IPR003004 GspF/PilC family M892_12730 7fd395ab85ba1894be7523377543bad3 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 166 194 3.9E-9 T 12-10-2018 IPR003004 GspF/PilC family M892_12730 7fd395ab85ba1894be7523377543bad3 407 Gene3D G3DSA:1.20.81.30 257 370 1.3E-28 T 12-10-2018 M892_12730 7fd395ab85ba1894be7523377543bad3 407 Pfam PF00482 Type II secretion system (T2SS), protein F 71 194 6.4E-30 T 12-10-2018 IPR018076 Type II secretion system F domain M892_12730 7fd395ab85ba1894be7523377543bad3 407 Pfam PF00482 Type II secretion system (T2SS), protein F 274 396 8.7E-27 T 12-10-2018 IPR018076 Type II secretion system F domain M892_10670 c9e40a9893a38d082fff4879a593fe6e 515 Gene3D G3DSA:3.40.50.1100 62 158 1.6E-133 T 12-10-2018 M892_10670 c9e40a9893a38d082fff4879a593fe6e 515 SUPERFAMILY SSF53686 15 366 7.86E-107 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme M892_10670 c9e40a9893a38d082fff4879a593fe6e 515 Gene3D G3DSA:3.40.1020.10 339 515 5.8E-72 T 12-10-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 M892_10670 c9e40a9893a38d082fff4879a593fe6e 515 Gene3D G3DSA:3.40.50.1100 26 328 1.6E-133 T 12-10-2018 M892_10670 c9e40a9893a38d082fff4879a593fe6e 515 SUPERFAMILY SSF55021 421 514 7.1E-27 T 12-10-2018 M892_10670 c9e40a9893a38d082fff4879a593fe6e 515 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 54 67 - T 12-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 M892_10670 c9e40a9893a38d082fff4879a593fe6e 515 SUPERFAMILY SSF55021 338 424 2.52E-27 T 12-10-2018 M892_10670 c9e40a9893a38d082fff4879a593fe6e 515 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 16 514 3.0E-250 T 12-10-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 M892_10670 c9e40a9893a38d082fff4879a593fe6e 515 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 30 317 1.4E-83 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme M892_10670 c9e40a9893a38d082fff4879a593fe6e 515 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 330 420 4.4E-25 T 12-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 M892_10670 c9e40a9893a38d082fff4879a593fe6e 515 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 428 514 6.4E-27 T 12-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 M892_12295 2a7257eaef9b6da6988554d0024c211d 328 Gene3D G3DSA:2.130.10.10 22 106 1.7E-6 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 M892_12295 2a7257eaef9b6da6988554d0024c211d 328 Gene3D G3DSA:2.130.10.10 107 328 2.4E-35 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 M892_12295 2a7257eaef9b6da6988554d0024c211d 328 SMART SM00320 192 230 1.2 T 12-10-2018 IPR001680 WD40 repeat GO:0005515 M892_12295 2a7257eaef9b6da6988554d0024c211d 328 SMART SM00320 151 189 1.6E-5 T 12-10-2018 IPR001680 WD40 repeat GO:0005515 M892_12295 2a7257eaef9b6da6988554d0024c211d 328 SMART SM00320 236 274 0.17 T 12-10-2018 IPR001680 WD40 repeat GO:0005515 M892_12295 2a7257eaef9b6da6988554d0024c211d 328 SMART SM00320 285 323 170.0 T 12-10-2018 IPR001680 WD40 repeat GO:0005515 M892_12295 2a7257eaef9b6da6988554d0024c211d 328 SMART SM00320 23 62 300.0 T 12-10-2018 IPR001680 WD40 repeat GO:0005515 M892_12295 2a7257eaef9b6da6988554d0024c211d 328 SMART SM00320 68 106 19.0 T 12-10-2018 IPR001680 WD40 repeat GO:0005515 M892_12295 2a7257eaef9b6da6988554d0024c211d 328 SUPERFAMILY SSF50998 26 328 4.08E-44 T 12-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily M892_12295 2a7257eaef9b6da6988554d0024c211d 328 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 176 190 - T 12-10-2018 IPR019775 WD40 repeat, conserved site M892_12295 2a7257eaef9b6da6988554d0024c211d 328 Pfam PF13360 PQQ-like domain 171 286 3.2E-4 T 12-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat M892_17725 de48bf69d194c7cc07f494700344f212 430 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 61 74 3.0E-6 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M892_17725 de48bf69d194c7cc07f494700344f212 430 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 187 200 3.0E-6 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M892_17725 de48bf69d194c7cc07f494700344f212 430 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 129 147 3.0E-6 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M892_17725 de48bf69d194c7cc07f494700344f212 430 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 66 272 2.8E-42 T 12-10-2018 IPR000477 Reverse transcriptase domain M892_17725 de48bf69d194c7cc07f494700344f212 430 Pfam PF08388 Group II intron, maturase-specific domain 288 356 1.6E-14 T 12-10-2018 IPR013597 Group II intron, maturase-specific M892_17725 de48bf69d194c7cc07f494700344f212 430 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 8 350 2.2E-118 T 12-10-2018 IPR030931 Group II intron reverse transcriptase/maturase M892_17725 de48bf69d194c7cc07f494700344f212 430 SUPERFAMILY SSF56672 15 360 2.95E-51 T 12-10-2018 M892_04115 de48bf69d194c7cc07f494700344f212 430 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 61 74 3.0E-6 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M892_04115 de48bf69d194c7cc07f494700344f212 430 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 187 200 3.0E-6 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M892_04115 de48bf69d194c7cc07f494700344f212 430 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 129 147 3.0E-6 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M892_04115 de48bf69d194c7cc07f494700344f212 430 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 66 272 2.8E-42 T 12-10-2018 IPR000477 Reverse transcriptase domain M892_04115 de48bf69d194c7cc07f494700344f212 430 Pfam PF08388 Group II intron, maturase-specific domain 288 356 1.6E-14 T 12-10-2018 IPR013597 Group II intron, maturase-specific M892_04115 de48bf69d194c7cc07f494700344f212 430 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 8 350 2.2E-118 T 12-10-2018 IPR030931 Group II intron reverse transcriptase/maturase M892_04115 de48bf69d194c7cc07f494700344f212 430 SUPERFAMILY SSF56672 15 360 2.95E-51 T 12-10-2018 M892_27060 de48bf69d194c7cc07f494700344f212 430 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 61 74 3.0E-6 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M892_27060 de48bf69d194c7cc07f494700344f212 430 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 187 200 3.0E-6 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M892_27060 de48bf69d194c7cc07f494700344f212 430 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 129 147 3.0E-6 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M892_27060 de48bf69d194c7cc07f494700344f212 430 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 66 272 2.8E-42 T 12-10-2018 IPR000477 Reverse transcriptase domain M892_27060 de48bf69d194c7cc07f494700344f212 430 Pfam PF08388 Group II intron, maturase-specific domain 288 356 1.6E-14 T 12-10-2018 IPR013597 Group II intron, maturase-specific M892_27060 de48bf69d194c7cc07f494700344f212 430 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 8 350 2.2E-118 T 12-10-2018 IPR030931 Group II intron reverse transcriptase/maturase M892_27060 de48bf69d194c7cc07f494700344f212 430 SUPERFAMILY SSF56672 15 360 2.95E-51 T 12-10-2018 M892_09070 de48bf69d194c7cc07f494700344f212 430 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 61 74 3.0E-6 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M892_09070 de48bf69d194c7cc07f494700344f212 430 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 187 200 3.0E-6 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M892_09070 de48bf69d194c7cc07f494700344f212 430 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 129 147 3.0E-6 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M892_09070 de48bf69d194c7cc07f494700344f212 430 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 66 272 2.8E-42 T 12-10-2018 IPR000477 Reverse transcriptase domain M892_09070 de48bf69d194c7cc07f494700344f212 430 Pfam PF08388 Group II intron, maturase-specific domain 288 356 1.6E-14 T 12-10-2018 IPR013597 Group II intron, maturase-specific M892_09070 de48bf69d194c7cc07f494700344f212 430 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 8 350 2.2E-118 T 12-10-2018 IPR030931 Group II intron reverse transcriptase/maturase M892_09070 de48bf69d194c7cc07f494700344f212 430 SUPERFAMILY SSF56672 15 360 2.95E-51 T 12-10-2018 M892_11015 de48bf69d194c7cc07f494700344f212 430 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 61 74 3.0E-6 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M892_11015 de48bf69d194c7cc07f494700344f212 430 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 187 200 3.0E-6 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M892_11015 de48bf69d194c7cc07f494700344f212 430 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 129 147 3.0E-6 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M892_11015 de48bf69d194c7cc07f494700344f212 430 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 66 272 2.8E-42 T 12-10-2018 IPR000477 Reverse transcriptase domain M892_11015 de48bf69d194c7cc07f494700344f212 430 Pfam PF08388 Group II intron, maturase-specific domain 288 356 1.6E-14 T 12-10-2018 IPR013597 Group II intron, maturase-specific M892_11015 de48bf69d194c7cc07f494700344f212 430 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 8 350 2.2E-118 T 12-10-2018 IPR030931 Group II intron reverse transcriptase/maturase M892_11015 de48bf69d194c7cc07f494700344f212 430 SUPERFAMILY SSF56672 15 360 2.95E-51 T 12-10-2018 M892_12850 de48bf69d194c7cc07f494700344f212 430 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 61 74 3.0E-6 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M892_12850 de48bf69d194c7cc07f494700344f212 430 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 187 200 3.0E-6 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M892_12850 de48bf69d194c7cc07f494700344f212 430 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 129 147 3.0E-6 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M892_12850 de48bf69d194c7cc07f494700344f212 430 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 66 272 2.8E-42 T 12-10-2018 IPR000477 Reverse transcriptase domain M892_12850 de48bf69d194c7cc07f494700344f212 430 Pfam PF08388 Group II intron, maturase-specific domain 288 356 1.6E-14 T 12-10-2018 IPR013597 Group II intron, maturase-specific M892_12850 de48bf69d194c7cc07f494700344f212 430 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 8 350 2.2E-118 T 12-10-2018 IPR030931 Group II intron reverse transcriptase/maturase M892_12850 de48bf69d194c7cc07f494700344f212 430 SUPERFAMILY SSF56672 15 360 2.95E-51 T 12-10-2018 M892_15460 de48bf69d194c7cc07f494700344f212 430 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 61 74 3.0E-6 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M892_15460 de48bf69d194c7cc07f494700344f212 430 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 187 200 3.0E-6 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M892_15460 de48bf69d194c7cc07f494700344f212 430 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 129 147 3.0E-6 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M892_15460 de48bf69d194c7cc07f494700344f212 430 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 66 272 2.8E-42 T 12-10-2018 IPR000477 Reverse transcriptase domain M892_15460 de48bf69d194c7cc07f494700344f212 430 Pfam PF08388 Group II intron, maturase-specific domain 288 356 1.6E-14 T 12-10-2018 IPR013597 Group II intron, maturase-specific M892_15460 de48bf69d194c7cc07f494700344f212 430 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 8 350 2.2E-118 T 12-10-2018 IPR030931 Group II intron reverse transcriptase/maturase M892_15460 de48bf69d194c7cc07f494700344f212 430 SUPERFAMILY SSF56672 15 360 2.95E-51 T 12-10-2018 M892_13945 44d6a7a2980a2c1b5e6437f2a56378b3 296 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 6 283 1.7E-43 T 12-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 M892_13945 44d6a7a2980a2c1b5e6437f2a56378b3 296 SUPERFAMILY SSF53067 114 283 8.33E-42 T 12-10-2018 M892_13945 44d6a7a2980a2c1b5e6437f2a56378b3 296 Gene3D G3DSA:3.30.420.40 115 261 4.6E-66 T 12-10-2018 M892_13945 44d6a7a2980a2c1b5e6437f2a56378b3 296 SUPERFAMILY SSF53067 1 111 2.48E-25 T 12-10-2018 M892_13945 44d6a7a2980a2c1b5e6437f2a56378b3 296 Gene3D G3DSA:3.30.420.40 4 114 4.6E-66 T 12-10-2018 M892_01970 ebe6903f62fd4d1699813bcb7f2ff5b4 202 Pfam PF13247 4Fe-4S dicluster domain 54 125 1.0E-9 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M892_01970 ebe6903f62fd4d1699813bcb7f2ff5b4 202 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 89 100 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M892_01970 ebe6903f62fd4d1699813bcb7f2ff5b4 202 Gene3D G3DSA:3.30.70.20 5 181 4.7E-33 T 12-10-2018 M892_01970 ebe6903f62fd4d1699813bcb7f2ff5b4 202 Gene3D G3DSA:3.30.70.20 63 120 4.7E-33 T 12-10-2018 M892_01970 ebe6903f62fd4d1699813bcb7f2ff5b4 202 SUPERFAMILY SSF54862 1 183 8.69E-47 T 12-10-2018 M892_13485 0c1507609448547cb5695b308ee9a4e0 93 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 36.655 T 12-10-2018 IPR023081 Cell division protein FtsB M892_13485 0c1507609448547cb5695b308ee9a4e0 93 Gene3D G3DSA:1.20.5.400 22 63 7.1E-13 T 12-10-2018 M892_13485 0c1507609448547cb5695b308ee9a4e0 93 Pfam PF04977 Septum formation initiator 11 89 9.2E-30 T 12-10-2018 IPR007060 Septum formation initiator FtsL/DivIC M892_05265 93b8bd17d8e1be3e3617d32040a0c365 82 Pfam PF10692 Protein of unknown function (DUF2498) 4 80 3.3E-42 T 12-10-2018 IPR019633 Protein of unknown function DUF2498 M892_05265 93b8bd17d8e1be3e3617d32040a0c365 82 Gene3D G3DSA:1.10.1900.30 8 76 2.0E-36 T 12-10-2018 IPR038191 YciN superfamily M892_01770 348a03825fed9d91dbf436e7e5a71ba9 888 Pfam PF13289 SIR2-like domain 156 280 1.9E-9 T 12-10-2018 IPR039444 SIR2-like domain M892_14885 3048fb4df0b089744f8e16669dc1aa4d 292 SUPERFAMILY SSF55920 3 282 2.49E-82 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like M892_14885 3048fb4df0b089744f8e16669dc1aa4d 292 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 197 215 - T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 M892_14885 3048fb4df0b089744f8e16669dc1aa4d 292 Hamap MF_01974 Methionine aminopeptidase [map]. 3 280 40.601 T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 M892_14885 3048fb4df0b089744f8e16669dc1aa4d 292 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 279 6.8E-84 T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 M892_14885 3048fb4df0b089744f8e16669dc1aa4d 292 Pfam PF00557 Metallopeptidase family M24 12 271 3.6E-46 T 12-10-2018 IPR000994 Peptidase M24 M892_14885 3048fb4df0b089744f8e16669dc1aa4d 292 Gene3D G3DSA:3.90.230.10 1 290 1.1E-103 T 12-10-2018 M892_11185 c499ad3e153f82a150bf541c23ebb122 270 Gene3D G3DSA:3.30.1240.10 87 191 6.4E-70 T 12-10-2018 M892_11185 c499ad3e153f82a150bf541c23ebb122 270 ProSitePatterns PS01229 Hypothetical cof family signature 2. 217 239 - T 12-10-2018 M892_11185 c499ad3e153f82a150bf541c23ebb122 270 Gene3D G3DSA:3.40.50.1000 14 261 6.4E-70 T 12-10-2018 IPR023214 HAD superfamily M892_11185 c499ad3e153f82a150bf541c23ebb122 270 ProSitePatterns PS01228 Hypothetical cof family signature 1. 13 24 - T 12-10-2018 M892_11185 c499ad3e153f82a150bf541c23ebb122 270 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 13 265 7.5E-57 T 12-10-2018 IPR000150 Cof family GO:0016787 M892_11185 c499ad3e153f82a150bf541c23ebb122 270 Pfam PF08282 haloacid dehalogenase-like hydrolase 14 265 3.6E-62 T 12-10-2018 M892_11185 c499ad3e153f82a150bf541c23ebb122 270 SUPERFAMILY SSF56784 12 269 7.24E-62 T 12-10-2018 IPR036412 HAD-like superfamily M892_11185 c499ad3e153f82a150bf541c23ebb122 270 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 13 236 3.3E-31 T 12-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 M892_11275 688236d98be52faffe0252af1ac05342 88 Pfam PF06611 Protein of unknown function (DUF1145) 4 59 3.0E-18 T 12-10-2018 IPR009525 Protein of unknown function DUF1145 M892_05405 3f5c769100f6a2c8d13be17be2135003 166 Gene3D G3DSA:1.10.287.680 1 53 2.6E-32 T 12-10-2018 IPR023145 YfbU, helix-hairpin domain superfamily M892_05405 3f5c769100f6a2c8d13be17be2135003 166 Pfam PF03887 YfbU domain 1 166 7.8E-70 T 12-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU M892_05405 3f5c769100f6a2c8d13be17be2135003 166 PIRSF PIRSF006272 1 166 5.4E-80 T 12-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU M892_05405 3f5c769100f6a2c8d13be17be2135003 166 SUPERFAMILY SSF116960 1 166 2.22E-64 T 12-10-2018 M892_05405 3f5c769100f6a2c8d13be17be2135003 166 Hamap MF_00762 UPF0304 protein YfbU [yfbU]. 1 166 38.084 T 12-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU M892_05405 3f5c769100f6a2c8d13be17be2135003 166 Gene3D G3DSA:1.10.3190.10 54 166 9.7E-37 T 12-10-2018 IPR023146 YfbU, alpha-helical bundle domain superfamily M892_05405 3f5c769100f6a2c8d13be17be2135003 166 ProDom PD035118 UPF0304 YFBU PLASMID YPO2563/Y1624/YP2374 YBFU PM1500 OXYGEN ECA3037 VV12093 PROTEIN 1 166 2.0E-91 T 12-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU M892_22605 8ae5dfa7e048deff11d60ec18f09a234 185 SMART SM00782 6 52 1.3E-29 T 12-10-2018 IPR013991 PhnA protein N-terminal, proteobacterial M892_22605 8ae5dfa7e048deff11d60ec18f09a234 185 Pfam PF08274 PhnA Zinc-Ribbon 13 52 5.0E-11 T 12-10-2018 IPR013987 PhnA protein, N-terminal M892_22605 8ae5dfa7e048deff11d60ec18f09a234 185 Pfam PF03831 PhnA domain 119 184 2.6E-22 T 12-10-2018 IPR013988 PhnA protein, C-terminal M892_22605 8ae5dfa7e048deff11d60ec18f09a234 185 SUPERFAMILY SSF82057 117 184 3.85E-20 T 12-10-2018 M892_22605 8ae5dfa7e048deff11d60ec18f09a234 185 Gene3D G3DSA:2.30.30.40 115 185 9.3E-24 T 12-10-2018 M892_18345 7fbbb15475b090941ee3750f8740cb70 183 Pfam PF13302 Acetyltransferase (GNAT) domain 21 158 1.2E-23 T 12-10-2018 IPR000182 GNAT domain M892_18345 7fbbb15475b090941ee3750f8740cb70 183 Gene3D G3DSA:3.40.630.30 8 172 9.0E-35 T 12-10-2018 M892_18345 7fbbb15475b090941ee3750f8740cb70 183 SUPERFAMILY SSF55729 16 181 5.85E-36 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_20515 4eadd47eb1c0dd2b5ef60bfeb9e82983 582 PIRSF PIRSF002741 377 580 0.45 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 M892_20515 4eadd47eb1c0dd2b5ef60bfeb9e82983 582 PIRSF PIRSF002741 91 369 7.0E-28 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 M892_20515 4eadd47eb1c0dd2b5ef60bfeb9e82983 582 Gene3D G3DSA:3.40.190.10 122 329 5.6E-30 T 12-10-2018 M892_20515 4eadd47eb1c0dd2b5ef60bfeb9e82983 582 SUPERFAMILY SSF53850 117 580 8.51E-61 T 12-10-2018 M892_20515 4eadd47eb1c0dd2b5ef60bfeb9e82983 582 Pfam PF12793 Sugar transport-related sRNA regulator N-term 6 119 5.6E-33 T 12-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain M892_20515 4eadd47eb1c0dd2b5ef60bfeb9e82983 582 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 164 370 8.7E-23 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain M892_20400 9dbad5d52cbe7442db76e521fdb46f42 481 SUPERFAMILY SSF51556 57 415 4.76E-86 T 12-10-2018 IPR032466 Metal-dependent hydrolase M892_20400 9dbad5d52cbe7442db76e521fdb46f42 481 SUPERFAMILY SSF51338 3 469 1.22E-16 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 M892_20400 9dbad5d52cbe7442db76e521fdb46f42 481 Gene3D G3DSA:3.20.20.140 56 415 6.9E-170 T 12-10-2018 M892_20400 9dbad5d52cbe7442db76e521fdb46f42 481 Pfam PF07969 Amidohydrolase family 45 459 2.6E-42 T 12-10-2018 IPR013108 Amidohydrolase 3 M892_20400 9dbad5d52cbe7442db76e521fdb46f42 481 Gene3D G3DSA:2.30.40.10 3 428 6.9E-170 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 M892_20400 9dbad5d52cbe7442db76e521fdb46f42 481 Gene3D G3DSA:3.30.1490.130 284 340 6.9E-170 T 12-10-2018 IPR023100 D-aminoacylase, insert domain superfamily GO:0016811 M892_05925 e9f56f3c0ea5ca364291235e2dffa777 205 Pfam PF03942 DTW domain 3 188 1.9E-47 T 12-10-2018 IPR005636 DTW M892_05925 e9f56f3c0ea5ca364291235e2dffa777 205 SMART SM01144 1 193 9.4E-65 T 12-10-2018 IPR005636 DTW M892_15130 3e0be7c5b3c2c2d2583c6bdbe1ccceaf 292 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 12-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 M892_15130 3e0be7c5b3c2c2d2583c6bdbe1ccceaf 292 Pfam PF00701 Dihydrodipicolinate synthetase family 2 287 2.0E-109 T 12-10-2018 IPR002220 DapA-like GO:0016829 M892_15130 3e0be7c5b3c2c2d2583c6bdbe1ccceaf 292 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 12-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 M892_15130 3e0be7c5b3c2c2d2583c6bdbe1ccceaf 292 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 4 288 1.4E-117 T 12-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 M892_15130 3e0be7c5b3c2c2d2583c6bdbe1ccceaf 292 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 288 65.466 T 12-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 M892_15130 3e0be7c5b3c2c2d2583c6bdbe1ccceaf 292 SMART SM01130 1 290 2.8E-141 T 12-10-2018 IPR002220 DapA-like GO:0016829 M892_15130 3e0be7c5b3c2c2d2583c6bdbe1ccceaf 292 PIRSF PIRSF001365 1 292 2.5E-96 T 12-10-2018 IPR002220 DapA-like GO:0016829 M892_15130 3e0be7c5b3c2c2d2583c6bdbe1ccceaf 292 SUPERFAMILY SSF51569 2 290 2.93E-101 T 12-10-2018 M892_15130 3e0be7c5b3c2c2d2583c6bdbe1ccceaf 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 2.6E-35 T 12-10-2018 IPR002220 DapA-like GO:0016829 M892_15130 3e0be7c5b3c2c2d2583c6bdbe1ccceaf 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 2.6E-35 T 12-10-2018 IPR002220 DapA-like GO:0016829 M892_15130 3e0be7c5b3c2c2d2583c6bdbe1ccceaf 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 2.6E-35 T 12-10-2018 IPR002220 DapA-like GO:0016829 M892_15130 3e0be7c5b3c2c2d2583c6bdbe1ccceaf 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 2.6E-35 T 12-10-2018 IPR002220 DapA-like GO:0016829 M892_15130 3e0be7c5b3c2c2d2583c6bdbe1ccceaf 292 Gene3D G3DSA:3.20.20.70 1 292 1.4E-111 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M892_09150 ce7a6130fe6694bc53b8dc869675ec10 130 SUPERFAMILY SSF56047 2 129 4.58E-44 T 12-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_09150 ce7a6130fe6694bc53b8dc869675ec10 130 Pfam PF00410 Ribosomal protein S8 5 129 5.3E-47 T 12-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_09150 ce7a6130fe6694bc53b8dc869675ec10 130 Gene3D G3DSA:3.30.1490.10 73 130 3.3E-25 T 12-10-2018 M892_09150 ce7a6130fe6694bc53b8dc869675ec10 130 Gene3D G3DSA:3.30.1370.30 2 72 6.5E-26 T 12-10-2018 M892_09150 ce7a6130fe6694bc53b8dc869675ec10 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 12-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_09150 ce7a6130fe6694bc53b8dc869675ec10 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 31.099 T 12-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_18680 46133637f3ff2c68c1c0b77907d8c3c8 331 Gene3D G3DSA:3.40.50.720 103 298 1.3E-133 T 12-10-2018 M892_18680 46133637f3ff2c68c1c0b77907d8c3c8 331 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 298 2.4E-51 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 M892_18680 46133637f3ff2c68c1c0b77907d8c3c8 331 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 224 240 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site M892_18680 46133637f3ff2c68c1c0b77907d8c3c8 331 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 6 327 1.1E-33 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 M892_18680 46133637f3ff2c68c1c0b77907d8c3c8 331 SUPERFAMILY SSF51735 103 299 3.31E-54 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_18680 46133637f3ff2c68c1c0b77907d8c3c8 331 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 148 175 - T 12-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 M892_18680 46133637f3ff2c68c1c0b77907d8c3c8 331 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 195 217 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site M892_18680 46133637f3ff2c68c1c0b77907d8c3c8 331 Gene3D G3DSA:3.40.50.720 4 318 1.3E-133 T 12-10-2018 M892_18680 46133637f3ff2c68c1c0b77907d8c3c8 331 SUPERFAMILY SSF52283 1 136 1.25E-41 T 12-10-2018 M892_15815 c8ecdc17a8f493c6db38c0bb0d6dc151 670 SUPERFAMILY SSF51395 4 364 1.2E-108 T 12-10-2018 M892_15815 c8ecdc17a8f493c6db38c0bb0d6dc151 670 PRINTS PR00419 Adrenodoxin reductase family signature 401 414 1.4E-9 T 12-10-2018 M892_15815 c8ecdc17a8f493c6db38c0bb0d6dc151 670 PRINTS PR00419 Adrenodoxin reductase family signature 378 400 1.4E-9 T 12-10-2018 M892_15815 c8ecdc17a8f493c6db38c0bb0d6dc151 670 Gene3D G3DSA:3.50.50.60 471 623 4.8E-108 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_15815 c8ecdc17a8f493c6db38c0bb0d6dc151 670 SUPERFAMILY SSF51971 376 625 6.94E-41 T 12-10-2018 M892_15815 c8ecdc17a8f493c6db38c0bb0d6dc151 670 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 330 1.0E-83 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 M892_15815 c8ecdc17a8f493c6db38c0bb0d6dc151 670 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 378 629 2.8E-24 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 M892_15815 c8ecdc17a8f493c6db38c0bb0d6dc151 670 Gene3D G3DSA:3.40.50.720 377 664 4.8E-108 T 12-10-2018 M892_15815 c8ecdc17a8f493c6db38c0bb0d6dc151 670 Gene3D G3DSA:3.20.20.70 4 370 1.2E-121 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M892_04160 8d9f4ff604e554fe2f4269729d69d588 162 SUPERFAMILY SSF46689 16 132 2.33E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_04160 8d9f4ff604e554fe2f4269729d69d588 162 Pfam PF13592 Winged helix-turn helix 109 156 7.3E-11 T 12-10-2018 IPR025959 Winged helix-turn helix domain M892_04160 8d9f4ff604e554fe2f4269729d69d588 162 Gene3D G3DSA:1.10.10.10 16 76 2.2E-5 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_04160 8d9f4ff604e554fe2f4269729d69d588 162 Pfam PF13551 Winged helix-turn helix 24 82 1.5E-11 T 12-10-2018 M892_00325 7ef4873c02be768deacec53a9f99c2c0 761 Gene3D G3DSA:1.20.140.10 301 446 9.5E-90 T 12-10-2018 M892_00325 7ef4873c02be768deacec53a9f99c2c0 761 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 301 447 4.8E-8 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 M892_00325 7ef4873c02be768deacec53a9f99c2c0 761 SUPERFAMILY SSF47203 301 453 1.26E-20 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 M892_00325 7ef4873c02be768deacec53a9f99c2c0 761 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 178 277 1.8E-9 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 M892_00325 7ef4873c02be768deacec53a9f99c2c0 761 Gene3D G3DSA:2.40.110.10 177 300 9.5E-90 T 12-10-2018 M892_00325 7ef4873c02be768deacec53a9f99c2c0 761 SUPERFAMILY SSF56645 60 296 9.03E-46 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 M892_00325 7ef4873c02be768deacec53a9f99c2c0 761 Pfam PF09317 Domain of unknown function (DUF1974) 455 739 2.9E-111 T 12-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 M892_00325 7ef4873c02be768deacec53a9f99c2c0 761 Gene3D G3DSA:1.10.540.10 63 176 9.5E-90 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 M892_00325 7ef4873c02be768deacec53a9f99c2c0 761 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 66 173 6.7E-14 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 M892_22250 90afe164fc9f3f907c3d809fe666e1bd 498 Pfam PF03050 Transposase IS66 family 179 462 2.7E-101 T 12-10-2018 IPR004291 Transposase, IS66 M892_22250 90afe164fc9f3f907c3d809fe666e1bd 498 Pfam PF13007 Transposase C of IS166 homeodomain 38 107 3.5E-14 T 12-10-2018 IPR024463 Transposase TnpC, homeodomain M892_22250 90afe164fc9f3f907c3d809fe666e1bd 498 Pfam PF13005 zinc-finger binding domain of transposase IS66 115 159 1.6E-16 T 12-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 M892_13470 a05318b32dc37bed9c33f6db082e6779 265 TIGRFAM TIGR00444 mazG: MazG family protein 11 260 6.2E-101 T 12-10-2018 IPR011551 NTP pyrophosphohydrolase MazG M892_13470 a05318b32dc37bed9c33f6db082e6779 265 Gene3D G3DSA:1.10.287.1080 2 126 7.4E-45 T 12-10-2018 M892_13470 a05318b32dc37bed9c33f6db082e6779 265 SUPERFAMILY SSF101386 138 239 1.76E-22 T 12-10-2018 M892_13470 a05318b32dc37bed9c33f6db082e6779 265 Gene3D G3DSA:1.10.287.1080 132 264 2.5E-43 T 12-10-2018 M892_13470 a05318b32dc37bed9c33f6db082e6779 265 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 172 231 9.9E-5 T 12-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core M892_13470 a05318b32dc37bed9c33f6db082e6779 265 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 28 101 2.0E-27 T 12-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core M892_13470 a05318b32dc37bed9c33f6db082e6779 265 SUPERFAMILY SSF101386 3 105 7.27E-25 T 12-10-2018 M892_08640 e46d1064875d7cf0e74aa5eab1eca6ba 620 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 410 423 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 M892_08640 e46d1064875d7cf0e74aa5eab1eca6ba 620 Gene3D G3DSA:1.10.10.10 459 535 2.6E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_08640 e46d1064875d7cf0e74aa5eab1eca6ba 620 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 4 619 46.029 T 12-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 M892_08640 e46d1064875d7cf0e74aa5eab1eca6ba 620 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 579 605 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 M892_08640 e46d1064875d7cf0e74aa5eab1eca6ba 620 Pfam PF04542 Sigma-70 region 2 386 455 1.7E-21 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 M892_08640 e46d1064875d7cf0e74aa5eab1eca6ba 620 Pfam PF04539 Sigma-70 region 3 465 540 1.3E-28 T 12-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 M892_08640 e46d1064875d7cf0e74aa5eab1eca6ba 620 PRINTS PR00046 Major sigma-70 factor signature 434 442 3.2E-31 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 M892_08640 e46d1064875d7cf0e74aa5eab1eca6ba 620 PRINTS PR00046 Major sigma-70 factor signature 594 605 3.2E-31 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 M892_08640 e46d1064875d7cf0e74aa5eab1eca6ba 620 PRINTS PR00046 Major sigma-70 factor signature 558 570 3.2E-31 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 M892_08640 e46d1064875d7cf0e74aa5eab1eca6ba 620 PRINTS PR00046 Major sigma-70 factor signature 410 423 3.2E-31 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 M892_08640 e46d1064875d7cf0e74aa5eab1eca6ba 620 PRINTS PR00046 Major sigma-70 factor signature 579 594 3.2E-31 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 M892_08640 e46d1064875d7cf0e74aa5eab1eca6ba 620 Pfam PF04546 Sigma-70, non-essential region 139 355 4.8E-67 T 12-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 M892_08640 e46d1064875d7cf0e74aa5eab1eca6ba 620 Gene3D G3DSA:1.10.601.10 113 455 2.7E-139 T 12-10-2018 M892_08640 e46d1064875d7cf0e74aa5eab1eca6ba 620 Gene3D G3DSA:1.10.220.120 1 64 2.5E-29 T 12-10-2018 M892_08640 e46d1064875d7cf0e74aa5eab1eca6ba 620 SUPERFAMILY SSF88659 459 532 2.22E-20 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like M892_08640 e46d1064875d7cf0e74aa5eab1eca6ba 620 Pfam PF03979 Sigma-70 factor, region 1.1 4 80 3.0E-28 T 12-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 M892_08640 e46d1064875d7cf0e74aa5eab1eca6ba 620 Pfam PF00140 Sigma-70 factor, region 1.2 98 128 1.3E-12 T 12-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 M892_08640 e46d1064875d7cf0e74aa5eab1eca6ba 620 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 382 607 6.0E-38 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 M892_08640 e46d1064875d7cf0e74aa5eab1eca6ba 620 Pfam PF04545 Sigma-70, region 4 554 607 1.8E-19 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 M892_08640 e46d1064875d7cf0e74aa5eab1eca6ba 620 SUPERFAMILY SSF88659 516 618 9.38E-26 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like M892_08640 e46d1064875d7cf0e74aa5eab1eca6ba 620 Gene3D G3DSA:1.10.10.10 536 620 1.3E-36 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_08640 e46d1064875d7cf0e74aa5eab1eca6ba 620 SUPERFAMILY SSF88946 115 453 1.44E-95 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 M892_08640 e46d1064875d7cf0e74aa5eab1eca6ba 620 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 382 618 2.2E-120 T 12-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 M892_22725 81de15cb27b54c659186ab6186c22575 652 Gene3D G3DSA:3.30.450.20 357 476 2.0E-14 T 12-10-2018 M892_22725 81de15cb27b54c659186ab6186c22575 652 SUPERFAMILY SSF55073 489 642 5.49E-45 T 12-10-2018 IPR029787 Nucleotide cyclase M892_22725 81de15cb27b54c659186ab6186c22575 652 Pfam PF13188 PAS domain 248 281 1.9E-5 T 12-10-2018 IPR000014 PAS domain M892_22725 81de15cb27b54c659186ab6186c22575 652 SMART SM00091 247 313 2.6E-4 T 12-10-2018 IPR000014 PAS domain M892_22725 81de15cb27b54c659186ab6186c22575 652 SMART SM00091 359 425 5.7E-8 T 12-10-2018 IPR000014 PAS domain M892_22725 81de15cb27b54c659186ab6186c22575 652 Pfam PF00990 Diguanylate cyclase, GGDEF domain 484 639 4.8E-45 T 12-10-2018 IPR000160 GGDEF domain M892_22725 81de15cb27b54c659186ab6186c22575 652 SMART SM00304 180 233 5.8E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M892_22725 81de15cb27b54c659186ab6186c22575 652 Gene3D G3DSA:3.30.450.20 239 356 3.3E-10 T 12-10-2018 M892_22725 81de15cb27b54c659186ab6186c22575 652 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 480 642 2.7E-43 T 12-10-2018 IPR000160 GGDEF domain M892_22725 81de15cb27b54c659186ab6186c22575 652 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 364 479 1.1E-12 T 12-10-2018 IPR000014 PAS domain M892_22725 81de15cb27b54c659186ab6186c22575 652 Gene3D G3DSA:1.20.1480.50 146 238 5.5E-7 T 12-10-2018 M892_22725 81de15cb27b54c659186ab6186c22575 652 SUPERFAMILY SSF55785 347 467 2.42E-14 T 12-10-2018 IPR035965 PAS domain superfamily M892_22725 81de15cb27b54c659186ab6186c22575 652 Pfam PF17152 Periplasmic sensor domain 37 142 8.2E-10 T 12-10-2018 IPR033417 Periplasmic sensor domain CHASE8 M892_22725 81de15cb27b54c659186ab6186c22575 652 SUPERFAMILY SSF158472 180 229 3.01E-7 T 12-10-2018 M892_22725 81de15cb27b54c659186ab6186c22575 652 Pfam PF00989 PAS fold 363 408 3.5E-7 T 12-10-2018 IPR013767 PAS fold GO:0006355 M892_22725 81de15cb27b54c659186ab6186c22575 652 Pfam PF00672 HAMP domain 180 229 1.4E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M892_22725 81de15cb27b54c659186ab6186c22575 652 SMART SM00267 473 644 6.2E-57 T 12-10-2018 IPR000160 GGDEF domain M892_22725 81de15cb27b54c659186ab6186c22575 652 SUPERFAMILY SSF55785 234 349 2.66E-9 T 12-10-2018 IPR035965 PAS domain superfamily M892_22725 81de15cb27b54c659186ab6186c22575 652 Gene3D G3DSA:3.30.70.270 477 645 1.6E-53 T 12-10-2018 M892_00430 e02432430a6250f3578d4c65e8af36b4 249 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 2 73 1.5E-25 T 12-10-2018 IPR025161 Putative transposase IS4/IS5 family M892_00430 e02432430a6250f3578d4c65e8af36b4 249 Pfam PF01609 Transposase DDE domain 85 243 3.4E-17 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_10030 e02432430a6250f3578d4c65e8af36b4 249 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 2 73 1.5E-25 T 12-10-2018 IPR025161 Putative transposase IS4/IS5 family M892_10030 e02432430a6250f3578d4c65e8af36b4 249 Pfam PF01609 Transposase DDE domain 85 243 3.4E-17 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_00445 e02432430a6250f3578d4c65e8af36b4 249 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 2 73 1.5E-25 T 12-10-2018 IPR025161 Putative transposase IS4/IS5 family M892_00445 e02432430a6250f3578d4c65e8af36b4 249 Pfam PF01609 Transposase DDE domain 85 243 3.4E-17 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_10295 e02432430a6250f3578d4c65e8af36b4 249 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 2 73 1.5E-25 T 12-10-2018 IPR025161 Putative transposase IS4/IS5 family M892_10295 e02432430a6250f3578d4c65e8af36b4 249 Pfam PF01609 Transposase DDE domain 85 243 3.4E-17 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_24035 baa36c33af5ea5f21569b02695bb0d8f 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 M892_24035 baa36c33af5ea5f21569b02695bb0d8f 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 4.0E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_24035 baa36c33af5ea5f21569b02695bb0d8f 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 4.0E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_24035 baa36c33af5ea5f21569b02695bb0d8f 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 4.0E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_24035 baa36c33af5ea5f21569b02695bb0d8f 252 Gene3D G3DSA:3.40.50.720 1 252 3.0E-71 T 12-10-2018 M892_24035 baa36c33af5ea5f21569b02695bb0d8f 252 SUPERFAMILY SSF51735 1 252 4.68E-67 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_24035 baa36c33af5ea5f21569b02695bb0d8f 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 250 1.1E-55 T 12-10-2018 M892_24035 baa36c33af5ea5f21569b02695bb0d8f 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 198 9.2E-4 T 12-10-2018 M892_24035 baa36c33af5ea5f21569b02695bb0d8f 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 1.7E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_24035 baa36c33af5ea5f21569b02695bb0d8f 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 1.7E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_24035 baa36c33af5ea5f21569b02695bb0d8f 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 1.7E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_24035 baa36c33af5ea5f21569b02695bb0d8f 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.7E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_24035 baa36c33af5ea5f21569b02695bb0d8f 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 1.7E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_24035 baa36c33af5ea5f21569b02695bb0d8f 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.7E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_25480 745d3800133be6d2cf297b84ad1a3f13 209 SUPERFAMILY SSF52172 3 136 6.83E-36 T 12-10-2018 IPR011006 CheY-like superfamily M892_25480 745d3800133be6d2cf297b84ad1a3f13 209 Pfam PF12840 Helix-turn-helix domain 133 188 6.9E-7 T 12-10-2018 M892_25480 745d3800133be6d2cf297b84ad1a3f13 209 SMART SM00448 3 114 4.7E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_25480 745d3800133be6d2cf297b84ad1a3f13 209 Gene3D G3DSA:1.10.10.10 118 207 1.2E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_25480 745d3800133be6d2cf297b84ad1a3f13 209 Gene3D G3DSA:3.40.50.2300 4 117 6.6E-31 T 12-10-2018 M892_25480 745d3800133be6d2cf297b84ad1a3f13 209 Pfam PF00072 Response regulator receiver domain 6 111 3.8E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_25480 745d3800133be6d2cf297b84ad1a3f13 209 SMART SM00418 134 206 0.0052 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M892_25480 745d3800133be6d2cf297b84ad1a3f13 209 SUPERFAMILY SSF46785 133 204 2.63E-10 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_06270 44069f401ec03949ec5341c071f97b31 130 SUPERFAMILY SSF81343 8 130 3.43E-34 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 M892_06270 44069f401ec03949ec5341c071f97b31 130 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 9 127 2.3E-39 T 12-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 M892_06270 44069f401ec03949ec5341c071f97b31 130 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 86 99 - T 12-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 M892_06270 44069f401ec03949ec5341c071f97b31 130 Gene3D G3DSA:1.20.1300.10 5 130 2.0E-43 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 M892_06270 44069f401ec03949ec5341c071f97b31 130 PIRSF PIRSF000178 2 130 9.9E-32 T 12-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 M892_06270 44069f401ec03949ec5341c071f97b31 130 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 11 35 - T 12-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 M892_06270 44069f401ec03949ec5341c071f97b31 130 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 8 124 1.2E-28 T 12-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 M892_11460 99bf1eac929fafe019ddb25c1d722ed8 347 Pfam PF01565 FAD binding domain 23 143 6.6E-17 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 M892_11460 99bf1eac929fafe019ddb25c1d722ed8 347 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 9 332 6.6E-92 T 12-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 M892_11460 99bf1eac929fafe019ddb25c1d722ed8 347 SUPERFAMILY SSF56176 8 197 1.36E-40 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 M892_11460 99bf1eac929fafe019ddb25c1d722ed8 347 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 210 331 1.7E-30 T 12-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 M892_11460 99bf1eac929fafe019ddb25c1d722ed8 347 Gene3D G3DSA:3.90.78.10 223 347 3.3E-41 T 12-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 M892_11460 99bf1eac929fafe019ddb25c1d722ed8 347 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 347 80.462 T 12-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 M892_11460 99bf1eac929fafe019ddb25c1d722ed8 347 Gene3D G3DSA:3.30.43.10 1 72 9.0E-20 T 12-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 M892_11460 99bf1eac929fafe019ddb25c1d722ed8 347 Gene3D G3DSA:3.30.465.10 73 222 9.8E-51 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 M892_11460 99bf1eac929fafe019ddb25c1d722ed8 347 SUPERFAMILY SSF56194 206 341 1.83E-46 T 12-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 M892_15955 c82cc1b8d6af1ab12e201148fff0f471 116 SUPERFAMILY SSF52833 6 109 2.37E-34 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M892_15955 c82cc1b8d6af1ab12e201148fff0f471 116 Gene3D G3DSA:3.40.30.10 6 111 1.2E-30 T 12-10-2018 M892_15955 c82cc1b8d6af1ab12e201148fff0f471 116 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 9 105 5.0E-46 T 12-10-2018 IPR004480 Monothiol glutaredoxin-related M892_15955 c82cc1b8d6af1ab12e201148fff0f471 116 PIRSF PIRSF005894 2 112 2.6E-52 T 12-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 M892_15955 c82cc1b8d6af1ab12e201148fff0f471 116 Pfam PF00462 Glutaredoxin 21 85 5.4E-17 T 12-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 M892_24030 7a5c9a60ab14cc7110ff532bda43b6c6 278 Gene3D G3DSA:2.60.40.420 98 266 8.7E-54 T 12-10-2018 IPR008972 Cupredoxin M892_24030 7a5c9a60ab14cc7110ff532bda43b6c6 278 SUPERFAMILY SSF81464 14 101 5.4E-24 T 12-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_24030 7a5c9a60ab14cc7110ff532bda43b6c6 278 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 2 224 1.2E-112 T 12-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 M892_24030 7a5c9a60ab14cc7110ff532bda43b6c6 278 Gene3D G3DSA:1.10.287.90 12 97 2.7E-34 T 12-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_24030 7a5c9a60ab14cc7110ff532bda43b6c6 278 PIRSF PIRSF000292 1 276 5.0E-125 T 12-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 M892_24030 7a5c9a60ab14cc7110ff532bda43b6c6 278 Pfam PF06481 COX Aromatic Rich Motif 224 268 1.8E-10 T 12-10-2018 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 M892_24030 7a5c9a60ab14cc7110ff532bda43b6c6 278 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 133 206 1.5E-7 T 12-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_24030 7a5c9a60ab14cc7110ff532bda43b6c6 278 SUPERFAMILY SSF49503 104 265 1.95E-48 T 12-10-2018 IPR008972 Cupredoxin M892_12575 a2a7bf317f17f1b26ea41f029debba20 161 Pfam PF01475 Ferric uptake regulator family 29 149 4.2E-20 T 12-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 M892_12575 a2a7bf317f17f1b26ea41f029debba20 161 SUPERFAMILY SSF46785 21 154 9.82E-36 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_12575 a2a7bf317f17f1b26ea41f029debba20 161 Gene3D G3DSA:3.30.1490.190 100 160 9.2E-17 T 12-10-2018 M892_12575 a2a7bf317f17f1b26ea41f029debba20 161 Gene3D G3DSA:1.10.10.10 13 99 4.4E-34 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_05430 1daeecf015ea74373340e4bdcd73fd21 59 Pfam PF03966 Trm112p-like protein 2 41 2.8E-11 T 12-10-2018 IPR005651 Trm112-like M892_05430 1daeecf015ea74373340e4bdcd73fd21 59 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 27.799 T 12-10-2018 IPR038053 Uncharacterised protein family UPF0434 M892_05430 1daeecf015ea74373340e4bdcd73fd21 59 Gene3D G3DSA:2.20.25.10 8 59 3.0E-24 T 12-10-2018 M892_05430 1daeecf015ea74373340e4bdcd73fd21 59 SUPERFAMILY SSF158997 1 54 1.05E-20 T 12-10-2018 M892_20870 f869e61ef1a9997b6e091d4d8e65c445 217 SUPERFAMILY SSF55620 10 216 2.08E-74 T 12-10-2018 M892_20870 f869e61ef1a9997b6e091d4d8e65c445 217 Gene3D G3DSA:3.30.1130.10 85 217 2.6E-52 T 12-10-2018 M892_20870 f869e61ef1a9997b6e091d4d8e65c445 217 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 38 216 1.8E-79 T 12-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 M892_20870 f869e61ef1a9997b6e091d4d8e65c445 217 Pfam PF01227 GTP cyclohydrolase I 38 215 9.1E-64 T 12-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 M892_20870 f869e61ef1a9997b6e091d4d8e65c445 217 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 144 154 - T 12-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 M892_20870 f869e61ef1a9997b6e091d4d8e65c445 217 Gene3D G3DSA:1.10.286.10 1 84 4.3E-37 T 12-10-2018 M892_20870 f869e61ef1a9997b6e091d4d8e65c445 217 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 34 217 33.826 T 12-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 M892_20870 f869e61ef1a9997b6e091d4d8e65c445 217 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 96 112 - T 12-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 M892_08800 ae9084530e427e0d30edef1a453ca189 200 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 188 1.3E-97 T 12-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 M892_08800 ae9084530e427e0d30edef1a453ca189 200 Gene3D G3DSA:3.20.19.10 1 180 1.3E-76 T 12-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 M892_08800 ae9084530e427e0d30edef1a453ca189 200 Pfam PF00694 Aconitase C-terminal domain 1 125 4.6E-39 T 12-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 M892_08800 ae9084530e427e0d30edef1a453ca189 200 SUPERFAMILY SSF52016 1 196 3.34E-60 T 12-10-2018 M892_08800 ae9084530e427e0d30edef1a453ca189 200 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 199 44.046 T 12-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 M892_14330 351829fe4ce842d39406a0a1fa436d1d 449 Pfam PF00263 Bacterial type II and III secretion system protein 243 400 5.9E-40 T 12-10-2018 IPR004846 Type II/III secretion system GO:0009306 M892_14330 351829fe4ce842d39406a0a1fa436d1d 449 PRINTS PR00811 Bacterial general secretion pathway protein D signature 365 383 1.1E-5 T 12-10-2018 IPR001775 GspD/PilQ family M892_14330 351829fe4ce842d39406a0a1fa436d1d 449 PRINTS PR00811 Bacterial general secretion pathway protein D signature 195 205 1.1E-5 T 12-10-2018 IPR001775 GspD/PilQ family M892_14330 351829fe4ce842d39406a0a1fa436d1d 449 Pfam PF04972 BON domain 99 145 7.4E-6 T 12-10-2018 IPR007055 BON domain M892_14330 351829fe4ce842d39406a0a1fa436d1d 449 Pfam PF13629 Pilus formation protein N terminal region 28 92 8.3E-14 T 12-10-2018 IPR032789 Pilus formation protein, N-terminal M892_14930 9bec4c97a99b12ef5faf2468a5068359 804 Gene3D G3DSA:3.10.20.310 347 424 6.7E-26 T 12-10-2018 M892_14930 9bec4c97a99b12ef5faf2468a5068359 804 Pfam PF07244 Surface antigen variable number repeat 92 172 8.2E-12 T 12-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 M892_14930 9bec4c97a99b12ef5faf2468a5068359 804 Pfam PF07244 Surface antigen variable number repeat 266 344 2.3E-10 T 12-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 M892_14930 9bec4c97a99b12ef5faf2468a5068359 804 Pfam PF07244 Surface antigen variable number repeat 347 420 5.6E-17 T 12-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 M892_14930 9bec4c97a99b12ef5faf2468a5068359 804 Pfam PF07244 Surface antigen variable number repeat 176 263 3.9E-15 T 12-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 M892_14930 9bec4c97a99b12ef5faf2468a5068359 804 Pfam PF01103 Surface antigen 448 804 2.6E-91 T 12-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 M892_14930 9bec4c97a99b12ef5faf2468a5068359 804 Gene3D G3DSA:3.10.20.310 92 174 2.6E-17 T 12-10-2018 M892_14930 9bec4c97a99b12ef5faf2468a5068359 804 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 24 804 4.3E-277 T 12-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 M892_14930 9bec4c97a99b12ef5faf2468a5068359 804 Gene3D G3DSA:3.10.20.310 18 91 1.1E-18 T 12-10-2018 M892_14930 9bec4c97a99b12ef5faf2468a5068359 804 Gene3D G3DSA:3.10.20.310 175 263 5.0E-22 T 12-10-2018 M892_14930 9bec4c97a99b12ef5faf2468a5068359 804 PIRSF PIRSF006076 1 804 2.6E-244 T 12-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 M892_14930 9bec4c97a99b12ef5faf2468a5068359 804 Gene3D G3DSA:3.10.20.310 264 346 4.0E-15 T 12-10-2018 M892_14930 9bec4c97a99b12ef5faf2468a5068359 804 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 2 804 25.75 T 12-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 M892_14930 9bec4c97a99b12ef5faf2468a5068359 804 Gene3D G3DSA:2.40.160.50 425 804 4.7E-122 T 12-10-2018 M892_19140 f596e56069c4684b88b7199ad6aa70be 229 SMART SM00903 26 181 0.0076 T 12-10-2018 IPR002563 Flavin reductase like domain GO:0010181 M892_19140 f596e56069c4684b88b7199ad6aa70be 229 Gene3D G3DSA:2.30.110.10 7 208 2.5E-45 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 M892_19140 f596e56069c4684b88b7199ad6aa70be 229 SUPERFAMILY SSF50475 10 199 6.38E-31 T 12-10-2018 M892_19140 f596e56069c4684b88b7199ad6aa70be 229 Pfam PF01613 Flavin reductase like domain 34 167 4.0E-15 T 12-10-2018 IPR002563 Flavin reductase like domain GO:0010181 M892_10245 b01f0aadbe02671ce2798f95e06a157c 341 Pfam PF01548 Transposase 8 142 5.6E-15 T 12-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 M892_10245 b01f0aadbe02671ce2798f95e06a157c 341 Pfam PF02371 Transposase IS116/IS110/IS902 family 212 289 2.1E-15 T 12-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 M892_23810 b01f0aadbe02671ce2798f95e06a157c 341 Pfam PF01548 Transposase 8 142 5.6E-15 T 12-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 M892_23810 b01f0aadbe02671ce2798f95e06a157c 341 Pfam PF02371 Transposase IS116/IS110/IS902 family 212 289 2.1E-15 T 12-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 M892_09290 b01f0aadbe02671ce2798f95e06a157c 341 Pfam PF01548 Transposase 8 142 5.6E-15 T 12-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 M892_09290 b01f0aadbe02671ce2798f95e06a157c 341 Pfam PF02371 Transposase IS116/IS110/IS902 family 212 289 2.1E-15 T 12-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 M892_16895 b01f0aadbe02671ce2798f95e06a157c 341 Pfam PF01548 Transposase 8 142 5.6E-15 T 12-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 M892_16895 b01f0aadbe02671ce2798f95e06a157c 341 Pfam PF02371 Transposase IS116/IS110/IS902 family 212 289 2.1E-15 T 12-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 M892_04220 b01f0aadbe02671ce2798f95e06a157c 341 Pfam PF01548 Transposase 8 142 5.6E-15 T 12-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 M892_04220 b01f0aadbe02671ce2798f95e06a157c 341 Pfam PF02371 Transposase IS116/IS110/IS902 family 212 289 2.1E-15 T 12-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 M892_14445 b01f0aadbe02671ce2798f95e06a157c 341 Pfam PF01548 Transposase 8 142 5.6E-15 T 12-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 M892_14445 b01f0aadbe02671ce2798f95e06a157c 341 Pfam PF02371 Transposase IS116/IS110/IS902 family 212 289 2.1E-15 T 12-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 M892_06915 b01f0aadbe02671ce2798f95e06a157c 341 Pfam PF01548 Transposase 8 142 5.6E-15 T 12-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 M892_06915 b01f0aadbe02671ce2798f95e06a157c 341 Pfam PF02371 Transposase IS116/IS110/IS902 family 212 289 2.1E-15 T 12-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 M892_23775 b01f0aadbe02671ce2798f95e06a157c 341 Pfam PF01548 Transposase 8 142 5.6E-15 T 12-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 M892_23775 b01f0aadbe02671ce2798f95e06a157c 341 Pfam PF02371 Transposase IS116/IS110/IS902 family 212 289 2.1E-15 T 12-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 M892_13530 849cb4b695838f748636a8bc2dafd865 853 Pfam PF05188 MutS domain II 128 253 8.1E-31 T 12-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 M892_13530 849cb4b695838f748636a8bc2dafd865 853 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 7 845 25.204 T 12-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 M892_13530 849cb4b695838f748636a8bc2dafd865 853 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 687 703 - T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 M892_13530 849cb4b695838f748636a8bc2dafd865 853 Pfam PF01624 MutS domain I 8 119 4.6E-41 T 12-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 M892_13530 849cb4b695838f748636a8bc2dafd865 853 Pfam PF00488 MutS domain V 609 796 8.9E-87 T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 M892_13530 849cb4b695838f748636a8bc2dafd865 853 Pfam PF05190 MutS family domain IV 427 517 1.3E-30 T 12-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 M892_13530 849cb4b695838f748636a8bc2dafd865 853 Gene3D G3DSA:1.10.1420.10 386 502 3.1E-104 T 12-10-2018 M892_13530 849cb4b695838f748636a8bc2dafd865 853 PIRSF PIRSF037677 1 831 3.3E-156 T 12-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 M892_13530 849cb4b695838f748636a8bc2dafd865 853 SUPERFAMILY SSF55271 4 113 6.15E-42 T 12-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 M892_13530 849cb4b695838f748636a8bc2dafd865 853 Gene3D G3DSA:3.40.1170.10 1 121 7.6E-52 T 12-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 M892_13530 849cb4b695838f748636a8bc2dafd865 853 SMART SM00533 283 590 5.2E-106 T 12-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 M892_13530 849cb4b695838f748636a8bc2dafd865 853 Gene3D G3DSA:3.40.50.300 567 851 2.0E-100 T 12-10-2018 M892_13530 849cb4b695838f748636a8bc2dafd865 853 Pfam PF05192 MutS domain III 269 558 1.3E-40 T 12-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 M892_13530 849cb4b695838f748636a8bc2dafd865 853 Gene3D G3DSA:3.30.420.110 127 261 3.1E-36 T 12-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 M892_13530 849cb4b695838f748636a8bc2dafd865 853 SMART SM00534 606 793 2.1E-119 T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 M892_13530 849cb4b695838f748636a8bc2dafd865 853 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 7 851 0.0 T 12-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 M892_13530 849cb4b695838f748636a8bc2dafd865 853 SUPERFAMILY SSF48334 267 564 2.35E-91 T 12-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily M892_13530 849cb4b695838f748636a8bc2dafd865 853 SUPERFAMILY SSF53150 114 266 5.89E-41 T 12-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 M892_13530 849cb4b695838f748636a8bc2dafd865 853 Gene3D G3DSA:1.10.1420.10 266 558 3.1E-104 T 12-10-2018 M892_13530 849cb4b695838f748636a8bc2dafd865 853 SUPERFAMILY SSF52540 566 797 3.25E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_19715 80ef5241ee47c78f79f5852df63d9b20 273 Pfam PF00196 Bacterial regulatory proteins, luxR family 209 261 7.3E-16 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_19715 80ef5241ee47c78f79f5852df63d9b20 273 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 240 252 6.3E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_19715 80ef5241ee47c78f79f5852df63d9b20 273 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 224 240 6.3E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_19715 80ef5241ee47c78f79f5852df63d9b20 273 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 210 224 6.3E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_19715 80ef5241ee47c78f79f5852df63d9b20 273 SUPERFAMILY SSF46894 202 267 2.48E-16 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M892_19715 80ef5241ee47c78f79f5852df63d9b20 273 Gene3D G3DSA:1.10.10.10 179 270 1.6E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_19715 80ef5241ee47c78f79f5852df63d9b20 273 SMART SM00421 207 264 4.3E-18 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_16450 93785fc12290b44e5857302da74559a5 320 Gene3D G3DSA:3.40.50.300 3 165 1.1E-49 T 12-10-2018 M892_16450 93785fc12290b44e5857302da74559a5 320 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 12 197 7.7E-63 T 12-10-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M892_16450 93785fc12290b44e5857302da74559a5 320 SUPERFAMILY SSF48019 208 319 2.21E-14 T 12-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 M892_16450 93785fc12290b44e5857302da74559a5 320 Pfam PF13177 DNA polymerase III, delta subunit 12 161 2.8E-44 T 12-10-2018 M892_16450 93785fc12290b44e5857302da74559a5 320 SUPERFAMILY SSF52540 2 180 1.03E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_16450 93785fc12290b44e5857302da74559a5 320 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 207 314 8.6E-22 T 12-10-2018 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M892_20105 a7b4d4eb26e8a237304584a4873b1d7b 335 SUPERFAMILY SSF51556 4 328 1.73E-90 T 12-10-2018 IPR032466 Metal-dependent hydrolase M892_20105 a7b4d4eb26e8a237304584a4873b1d7b 335 Hamap MF_01962 Adenine deaminase. 4 316 83.541 T 12-10-2018 IPR028892 Adenine deaminase type 2 GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 M892_20105 a7b4d4eb26e8a237304584a4873b1d7b 335 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 8 326 4.4E-116 T 12-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 M892_20105 a7b4d4eb26e8a237304584a4873b1d7b 335 Gene3D G3DSA:3.20.20.140 1 334 5.9E-105 T 12-10-2018 M892_20105 a7b4d4eb26e8a237304584a4873b1d7b 335 Pfam PF00962 Adenosine/AMP deaminase 8 323 4.7E-74 T 12-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 M892_25295 2ee808f122237f6d11664105d551528a 276 Pfam PF10364 Putative capsular polysaccharide synthesis protein 121 257 6.8E-59 T 12-10-2018 IPR018831 Uncharacterised protein family NKWYS M892_25295 2ee808f122237f6d11664105d551528a 276 SUPERFAMILY SSF52540 18 153 4.91E-8 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_04590 a04261198761f96c8ae3692ef991f7a3 386 Gene3D G3DSA:1.10.3290.10 74 386 7.6E-108 T 12-10-2018 IPR036597 Fido-like domain superfamily M892_00270 437ebdbfe3d1d977a8c59f2cb91f02a6 458 TIGRFAM TIGR00797 matE: MATE efflux family protein 25 421 2.6E-62 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M892_00270 437ebdbfe3d1d977a8c59f2cb91f02a6 458 PIRSF PIRSF006603 8 458 7.6E-65 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M892_00270 437ebdbfe3d1d977a8c59f2cb91f02a6 458 Pfam PF01554 MatE 252 413 4.2E-17 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M892_00270 437ebdbfe3d1d977a8c59f2cb91f02a6 458 Pfam PF01554 MatE 25 185 1.5E-25 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M892_01825 893f1e433f49a1084b6ff9e83051913c 207 SMART SM00479 8 191 8.1E-24 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III M892_01825 893f1e433f49a1084b6ff9e83051913c 207 Pfam PF00929 Exonuclease 10 179 7.1E-19 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III M892_01825 893f1e433f49a1084b6ff9e83051913c 207 SUPERFAMILY SSF53098 9 197 9.11E-37 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_01825 893f1e433f49a1084b6ff9e83051913c 207 Gene3D G3DSA:3.30.420.10 2 195 1.1E-36 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M892_14530 689d6e65cccb2f4384735f61d0261098 505 SUPERFAMILY SSF53067 255 497 7.92E-85 T 12-10-2018 M892_14530 689d6e65cccb2f4384735f61d0261098 505 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 253 4.7E-86 T 12-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 M892_14530 689d6e65cccb2f4384735f61d0261098 505 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 136 148 - T 12-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 M892_14530 689d6e65cccb2f4384735f61d0261098 505 PIRSF PIRSF000538 4 503 2.4E-177 T 12-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 M892_14530 689d6e65cccb2f4384735f61d0261098 505 Hamap MF_00186 Glycerol kinase [glpK]. 4 498 58.185 T 12-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 M892_14530 689d6e65cccb2f4384735f61d0261098 505 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 5 497 5.2E-225 T 12-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 M892_14530 689d6e65cccb2f4384735f61d0261098 505 Gene3D G3DSA:3.30.420.40 255 501 7.6E-93 T 12-10-2018 M892_14530 689d6e65cccb2f4384735f61d0261098 505 SUPERFAMILY SSF53067 5 256 6.29E-94 T 12-10-2018 M892_14530 689d6e65cccb2f4384735f61d0261098 505 Gene3D G3DSA:3.30.420.40 2 254 1.4E-112 T 12-10-2018 M892_14530 689d6e65cccb2f4384735f61d0261098 505 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 262 451 1.0E-59 T 12-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 M892_14530 689d6e65cccb2f4384735f61d0261098 505 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 363 383 - T 12-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 M892_06040 b347884e9847a9183fbe8af0c176f87d 1317 Pfam PF00668 Condensation domain 11 426 3.8E-64 T 12-10-2018 IPR001242 Condensation domain M892_06040 b347884e9847a9183fbe8af0c176f87d 1317 SUPERFAMILY SSF56801 437 993 4.06E-169 T 12-10-2018 M892_06040 b347884e9847a9183fbe8af0c176f87d 1317 SUPERFAMILY SSF52777 16 173 5.45E-35 T 12-10-2018 M892_06040 b347884e9847a9183fbe8af0c176f87d 1317 Gene3D G3DSA:3.30.559.10 16 211 1.0E-50 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 M892_06040 b347884e9847a9183fbe8af0c176f87d 1317 SUPERFAMILY SSF53474 1047 1311 1.64E-52 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_06040 b347884e9847a9183fbe8af0c176f87d 1317 ProSitePatterns PS00455 Putative AMP-binding domain signature. 615 626 - T 12-10-2018 IPR020845 AMP-binding, conserved site M892_06040 b347884e9847a9183fbe8af0c176f87d 1317 Pfam PF00501 AMP-binding enzyme 479 871 1.9E-105 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 M892_06040 b347884e9847a9183fbe8af0c176f87d 1317 Pfam PF00550 Phosphopantetheine attachment site 981 1043 1.1E-13 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain M892_06040 b347884e9847a9183fbe8af0c176f87d 1317 SMART SM00823 Phosphopantetheine attachment site 980 1049 0.0016 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 M892_06040 b347884e9847a9183fbe8af0c176f87d 1317 Gene3D G3DSA:3.30.559.30 212 438 3.4E-60 T 12-10-2018 M892_06040 b347884e9847a9183fbe8af0c176f87d 1317 Gene3D G3DSA:3.40.50.12780 458 865 3.0E-140 T 12-10-2018 M892_06040 b347884e9847a9183fbe8af0c176f87d 1317 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 493 895 2.6E-135 T 12-10-2018 IPR010071 Amino acid adenylation domain M892_06040 b347884e9847a9183fbe8af0c176f87d 1317 Gene3D G3DSA:3.30.300.30 866 969 4.8E-36 T 12-10-2018 M892_06040 b347884e9847a9183fbe8af0c176f87d 1317 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1004 1019 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site M892_06040 b347884e9847a9183fbe8af0c176f87d 1317 Gene3D G3DSA:3.40.50.1820 970 1313 1.7E-97 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_06040 b347884e9847a9183fbe8af0c176f87d 1317 SUPERFAMILY SSF47336 975 1045 2.09E-18 T 12-10-2018 IPR036736 ACP-like superfamily M892_06040 b347884e9847a9183fbe8af0c176f87d 1317 SUPERFAMILY SSF52777 195 459 1.56E-37 T 12-10-2018 M892_06040 b347884e9847a9183fbe8af0c176f87d 1317 Pfam PF13193 AMP-binding enzyme C-terminal domain 879 955 3.5E-14 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain M892_06040 b347884e9847a9183fbe8af0c176f87d 1317 Pfam PF00975 Thioesterase domain 1069 1303 1.4E-26 T 12-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 M892_02430 905f69011152f5a0c4e4687a744f7cc8 104 SUPERFAMILY SSF53474 7 96 7.2E-14 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_02430 905f69011152f5a0c4e4687a744f7cc8 104 Pfam PF07859 alpha/beta hydrolase fold 6 76 1.6E-15 T 12-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 M892_02430 905f69011152f5a0c4e4687a744f7cc8 104 Gene3D G3DSA:3.40.50.1820 1 99 2.1E-20 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_13800 5a2f9ce2df6296c9618b90de914666ba 176 Pfam PF00156 Phosphoribosyl transferase domain 12 159 1.5E-25 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 M892_13800 5a2f9ce2df6296c9618b90de914666ba 176 SUPERFAMILY SSF53271 3 175 3.41E-56 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like M892_13800 5a2f9ce2df6296c9618b90de914666ba 176 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 7 172 4.0E-74 T 12-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 M892_13800 5a2f9ce2df6296c9618b90de914666ba 176 Gene3D G3DSA:3.40.50.2020 1 176 4.5E-67 T 12-10-2018 M892_23800 4d7a041f5bfaaf72b47236ba6b29b7a0 327 Pfam PF02779 Transketolase, pyrimidine binding domain 4 178 9.6E-48 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain M892_23800 4d7a041f5bfaaf72b47236ba6b29b7a0 327 SUPERFAMILY SSF52518 4 190 4.82E-63 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold M892_23800 4d7a041f5bfaaf72b47236ba6b29b7a0 327 Pfam PF02780 Transketolase, C-terminal domain 198 315 2.6E-36 T 12-10-2018 IPR033248 Transketolase, C-terminal domain M892_23800 4d7a041f5bfaaf72b47236ba6b29b7a0 327 Gene3D G3DSA:3.40.50.920 198 324 8.2E-42 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 M892_23800 4d7a041f5bfaaf72b47236ba6b29b7a0 327 SMART SM00861 4 179 1.6E-60 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain M892_23800 4d7a041f5bfaaf72b47236ba6b29b7a0 327 Gene3D G3DSA:3.40.50.970 1 192 9.7E-74 T 12-10-2018 M892_23800 4d7a041f5bfaaf72b47236ba6b29b7a0 327 SUPERFAMILY SSF52922 190 323 1.44E-37 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 M892_24420 ab8f6fe1932d11b45f0e4877a5205577 210 Gene3D G3DSA:3.40.30.10 24 208 5.3E-40 T 12-10-2018 M892_24420 ab8f6fe1932d11b45f0e4877a5205577 210 Pfam PF13462 Thioredoxin 49 198 1.6E-8 T 12-10-2018 IPR012336 Thioredoxin-like fold M892_24420 ab8f6fe1932d11b45f0e4877a5205577 210 ProSitePatterns PS00194 Thioredoxin family active site. 49 67 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 M892_24420 ab8f6fe1932d11b45f0e4877a5205577 210 SUPERFAMILY SSF52833 27 207 2.63E-25 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M892_12165 27ce3aece043f3fbdf31cbcabe036bd8 438 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 431 9.5E-191 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 M892_12165 27ce3aece043f3fbdf31cbcabe036bd8 438 Pfam PF00709 Adenylosuccinate synthetase 5 430 3.4E-179 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 M892_12165 27ce3aece043f3fbdf31cbcabe036bd8 438 SMART SM00788 4 431 1.2E-301 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 M892_12165 27ce3aece043f3fbdf31cbcabe036bd8 438 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 12-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 M892_12165 27ce3aece043f3fbdf31cbcabe036bd8 438 Gene3D G3DSA:3.40.440.10 6 249 4.4E-106 T 12-10-2018 M892_12165 27ce3aece043f3fbdf31cbcabe036bd8 438 Gene3D G3DSA:3.90.170.10 267 438 9.7E-67 T 12-10-2018 M892_12165 27ce3aece043f3fbdf31cbcabe036bd8 438 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 438 217.416 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 M892_12165 27ce3aece043f3fbdf31cbcabe036bd8 438 SUPERFAMILY SSF52540 3 434 1.38E-178 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_12165 27ce3aece043f3fbdf31cbcabe036bd8 438 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 12-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 M892_12165 27ce3aece043f3fbdf31cbcabe036bd8 438 Gene3D G3DSA:1.10.300.10 102 201 4.4E-106 T 12-10-2018 M892_14400 68b19fee954acc1f0a8ec229c8152c3d 480 Pfam PF13520 Amino acid permease 11 443 1.8E-29 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 M892_14400 68b19fee954acc1f0a8ec229c8152c3d 480 PIRSF PIRSF006060 1 476 6.1E-41 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 M892_14400 68b19fee954acc1f0a8ec229c8152c3d 480 Gene3D G3DSA:1.20.1740.10 13 475 5.2E-8 T 12-10-2018 M892_06815 0c01e4fde96a15356b0c3290c96ace8e 391 Gene3D G3DSA:3.50.50.60 5 338 2.6E-97 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_06815 0c01e4fde96a15356b0c3290c96ace8e 391 Gene3D G3DSA:3.30.9.50 80 274 2.6E-97 T 12-10-2018 M892_06815 0c01e4fde96a15356b0c3290c96ace8e 391 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 390 1.9E-109 T 12-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 M892_06815 0c01e4fde96a15356b0c3290c96ace8e 391 Pfam PF01494 FAD binding domain 4 340 2.3E-27 T 12-10-2018 IPR002938 FAD-binding domain GO:0071949 M892_06815 0c01e4fde96a15356b0c3290c96ace8e 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 1.2E-17 T 12-10-2018 M892_06815 0c01e4fde96a15356b0c3290c96ace8e 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 300 316 1.2E-17 T 12-10-2018 M892_06815 0c01e4fde96a15356b0c3290c96ace8e 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 285 300 1.2E-17 T 12-10-2018 M892_06815 0c01e4fde96a15356b0c3290c96ace8e 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 1.2E-17 T 12-10-2018 M892_06815 0c01e4fde96a15356b0c3290c96ace8e 391 SUPERFAMILY SSF51905 3 383 2.2E-55 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_05465 de826bbaf70dbc2def8fa5f7f978df30 374 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 1 374 1.5E-124 T 12-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 M892_05465 de826bbaf70dbc2def8fa5f7f978df30 374 Pfam PF02687 FtsX-like permease family 268 367 8.1E-12 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 M892_05465 de826bbaf70dbc2def8fa5f7f978df30 374 Pfam PF12704 MacB-like periplasmic core domain 2 181 1.2E-13 T 12-10-2018 IPR025857 MacB-like periplasmic core domain M892_23885 b6f7c56ce3516003c5164b42d40e4927 247 SMART SM00062 26 247 6.0E-73 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M892_23885 b6f7c56ce3516003c5164b42d40e4927 247 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 3 245 3.9E-83 T 12-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 M892_23885 b6f7c56ce3516003c5164b42d40e4927 247 SUPERFAMILY SSF53850 1 246 4.56E-69 T 12-10-2018 M892_23885 b6f7c56ce3516003c5164b42d40e4927 247 Gene3D G3DSA:3.40.190.10 30 244 6.9E-77 T 12-10-2018 M892_23885 b6f7c56ce3516003c5164b42d40e4927 247 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 247 3.8E-65 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M892_23885 b6f7c56ce3516003c5164b42d40e4927 247 Gene3D G3DSA:3.40.190.10 113 205 6.9E-77 T 12-10-2018 M892_23885 b6f7c56ce3516003c5164b42d40e4927 247 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 49 62 - T 12-10-2018 IPR018313 Solute-binding protein family 3, conserved site M892_23885 b6f7c56ce3516003c5164b42d40e4927 247 SMART SM00079 26 247 0.0013 T 12-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 M892_02740 69c2b27fd289263cd3c76bb34a35d5a6 98 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 95 7.4E-51 T 12-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 M892_02740 69c2b27fd289263cd3c76bb34a35d5a6 98 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 12-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 M892_02740 69c2b27fd289263cd3c76bb34a35d5a6 98 Pfam PF00216 Bacterial DNA-binding protein 3 91 2.0E-31 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 M892_02740 69c2b27fd289263cd3c76bb34a35d5a6 98 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 5.9E-17 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 M892_02740 69c2b27fd289263cd3c76bb34a35d5a6 98 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 5.9E-17 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 M892_02740 69c2b27fd289263cd3c76bb34a35d5a6 98 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 5.9E-17 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 M892_02740 69c2b27fd289263cd3c76bb34a35d5a6 98 SMART SM00411 3 92 1.6E-40 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 M892_02740 69c2b27fd289263cd3c76bb34a35d5a6 98 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 30.644 T 12-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 M892_02740 69c2b27fd289263cd3c76bb34a35d5a6 98 SUPERFAMILY SSF47729 3 95 3.68E-32 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 M892_02740 69c2b27fd289263cd3c76bb34a35d5a6 98 Gene3D G3DSA:4.10.520.10 1 98 4.8E-38 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 M892_13460 0bb1e62d0922683ead7c0a67cf009e30 439 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 97 438 1.9E-34 T 12-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 M892_13460 0bb1e62d0922683ead7c0a67cf009e30 439 SUPERFAMILY SSF50249 18 74 3.43E-13 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M892_13460 0bb1e62d0922683ead7c0a67cf009e30 439 Gene3D G3DSA:3.40.1350.30 135 271 1.2E-116 T 12-10-2018 M892_13460 0bb1e62d0922683ead7c0a67cf009e30 439 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 19 439 63.795 T 12-10-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 M892_13460 0bb1e62d0922683ead7c0a67cf009e30 439 Pfam PF01938 TRAM domain 17 68 6.1E-8 T 12-10-2018 IPR002792 TRAM domain M892_13460 0bb1e62d0922683ead7c0a67cf009e30 439 Gene3D G3DSA:2.40.50.140 1 88 4.9E-28 T 12-10-2018 M892_13460 0bb1e62d0922683ead7c0a67cf009e30 439 SUPERFAMILY SSF53335 77 438 1.72E-85 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M892_13460 0bb1e62d0922683ead7c0a67cf009e30 439 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 370 400 - T 12-10-2018 IPR030390 RNA methyltransferase TrmA, active site M892_13460 0bb1e62d0922683ead7c0a67cf009e30 439 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 25 431 2.7E-126 T 12-10-2018 M892_13460 0bb1e62d0922683ead7c0a67cf009e30 439 Gene3D G3DSA:3.40.50.150 89 433 1.2E-116 T 12-10-2018 M892_13460 0bb1e62d0922683ead7c0a67cf009e30 439 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 421 431 - T 12-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site M892_02015 1d5dd6a8bf3649f5af63a06ff3644972 530 SUPERFAMILY SSF52540 299 521 1.68E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_02015 1d5dd6a8bf3649f5af63a06ff3644972 530 SUPERFAMILY SSF52540 7 237 1.05E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_02015 1d5dd6a8bf3649f5af63a06ff3644972 530 Gene3D G3DSA:3.40.50.300 282 529 4.8E-51 T 12-10-2018 M892_02015 1d5dd6a8bf3649f5af63a06ff3644972 530 Pfam PF00005 ABC transporter 336 466 1.6E-21 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_02015 1d5dd6a8bf3649f5af63a06ff3644972 530 Pfam PF00005 ABC transporter 18 184 2.0E-20 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_02015 1d5dd6a8bf3649f5af63a06ff3644972 530 SMART SM00382 26 238 9.8E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_02015 1d5dd6a8bf3649f5af63a06ff3644972 530 SMART SM00382 343 511 1.0E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_02015 1d5dd6a8bf3649f5af63a06ff3644972 530 Pfam PF12848 ABC transporter 224 309 1.4E-21 T 12-10-2018 IPR032781 ABC-transporter extension domain M892_02015 1d5dd6a8bf3649f5af63a06ff3644972 530 Gene3D G3DSA:3.40.50.300 2 281 1.3E-56 T 12-10-2018 M892_23270 a68bf03a99c0297f53e2ae285264739c 154 Pfam PF05932 Tir chaperone protein (CesT) family 11 121 4.7E-16 T 12-10-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 M892_23270 a68bf03a99c0297f53e2ae285264739c 154 Gene3D G3DSA:3.30.1460.10 5 142 9.5E-23 T 12-10-2018 M892_23270 a68bf03a99c0297f53e2ae285264739c 154 SUPERFAMILY SSF69635 7 130 9.1E-19 T 12-10-2018 M892_25450 7a0a1675579469667c33269aa3d82cbb 301 SUPERFAMILY SSF103088 168 290 1.7E-26 T 12-10-2018 IPR036737 OmpA-like domain superfamily M892_25450 7a0a1675579469667c33269aa3d82cbb 301 Pfam PF00691 OmpA family 191 285 1.8E-18 T 12-10-2018 IPR006665 OmpA-like domain M892_25450 7a0a1675579469667c33269aa3d82cbb 301 Pfam PF00691 OmpA family 62 156 5.3E-17 T 12-10-2018 IPR006665 OmpA-like domain M892_25450 7a0a1675579469667c33269aa3d82cbb 301 SUPERFAMILY SSF103088 52 162 9.68E-24 T 12-10-2018 IPR036737 OmpA-like domain superfamily M892_25450 7a0a1675579469667c33269aa3d82cbb 301 PRINTS PR01021 OMPA domain signature 235 251 3.3E-17 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M892_25450 7a0a1675579469667c33269aa3d82cbb 301 PRINTS PR01021 OMPA domain signature 220 235 3.3E-17 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M892_25450 7a0a1675579469667c33269aa3d82cbb 301 PRINTS PR01021 OMPA domain signature 191 213 3.3E-17 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M892_25450 7a0a1675579469667c33269aa3d82cbb 301 Gene3D G3DSA:3.30.1330.60 43 162 1.8E-25 T 12-10-2018 IPR036737 OmpA-like domain superfamily M892_25450 7a0a1675579469667c33269aa3d82cbb 301 Gene3D G3DSA:3.30.1330.60 173 291 2.6E-25 T 12-10-2018 IPR036737 OmpA-like domain superfamily M892_12325 699591b434c362d7ce9072621666aaeb 124 Pfam PF00164 Ribosomal protein S12/S23 12 123 1.4E-42 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_12325 699591b434c362d7ce9072621666aaeb 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_12325 699591b434c362d7ce9072621666aaeb 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.818 T 12-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_12325 699591b434c362d7ce9072621666aaeb 124 PIRSF PIRSF002133 1 124 3.0E-54 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_12325 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 2.1E-60 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_12325 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 2.1E-60 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_12325 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 2.1E-60 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_12325 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 2.1E-60 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_12325 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 2.1E-60 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_12325 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 2.1E-60 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_12325 699591b434c362d7ce9072621666aaeb 124 Gene3D G3DSA:2.40.50.140 1 124 6.1E-64 T 12-10-2018 M892_12325 699591b434c362d7ce9072621666aaeb 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 8.5E-71 T 12-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_12325 699591b434c362d7ce9072621666aaeb 124 SUPERFAMILY SSF50249 3 123 2.83E-52 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M892_09325 cafdf7050126b24832f22781925a9933 405 PRINTS PR00714 Phosphomannose isomerase type I signature 271 290 1.2E-67 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 M892_09325 cafdf7050126b24832f22781925a9933 405 PRINTS PR00714 Phosphomannose isomerase type I signature 131 154 1.2E-67 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 M892_09325 cafdf7050126b24832f22781925a9933 405 PRINTS PR00714 Phosphomannose isomerase type I signature 236 251 1.2E-67 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 M892_09325 cafdf7050126b24832f22781925a9933 405 PRINTS PR00714 Phosphomannose isomerase type I signature 86 107 1.2E-67 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 M892_09325 cafdf7050126b24832f22781925a9933 405 PRINTS PR00714 Phosphomannose isomerase type I signature 38 53 1.2E-67 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 M892_09325 cafdf7050126b24832f22781925a9933 405 PRINTS PR00714 Phosphomannose isomerase type I signature 252 271 1.2E-67 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 M892_09325 cafdf7050126b24832f22781925a9933 405 PRINTS PR00714 Phosphomannose isomerase type I signature 10 28 1.2E-67 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 M892_09325 cafdf7050126b24832f22781925a9933 405 PRINTS PR00714 Phosphomannose isomerase type I signature 290 309 1.2E-67 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 M892_09325 cafdf7050126b24832f22781925a9933 405 SUPERFAMILY SSF51182 7 396 2.91E-99 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily M892_09325 cafdf7050126b24832f22781925a9933 405 ProSitePatterns PS00966 Phosphomannose isomerase type I signature 2. 271 296 - T 12-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 M892_09325 cafdf7050126b24832f22781925a9933 405 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 131 139 - T 12-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 M892_09325 cafdf7050126b24832f22781925a9933 405 Pfam PF01238 Phosphomannose isomerase type I 8 365 3.6E-86 T 12-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 M892_09325 cafdf7050126b24832f22781925a9933 405 Gene3D G3DSA:1.10.441.10 155 316 1.1E-124 T 12-10-2018 M892_09325 cafdf7050126b24832f22781925a9933 405 Gene3D G3DSA:2.60.120.10 12 291 1.1E-124 T 12-10-2018 IPR014710 RmlC-like jelly roll fold M892_09325 cafdf7050126b24832f22781925a9933 405 Gene3D G3DSA:2.60.120.10 317 398 1.1E-124 T 12-10-2018 IPR014710 RmlC-like jelly roll fold M892_09325 cafdf7050126b24832f22781925a9933 405 PIRSF PIRSF001480 4 405 7.7E-108 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 M892_09325 cafdf7050126b24832f22781925a9933 405 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 6 397 5.2E-86 T 12-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 M892_07125 42406ad25b25eaaa2d58d5ed4bcba9a4 411 SUPERFAMILY SSF53720 2 403 9.95E-110 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 M892_07125 42406ad25b25eaaa2d58d5ed4bcba9a4 411 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 1 410 37.949 T 12-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 M892_07125 42406ad25b25eaaa2d58d5ed4bcba9a4 411 Gene3D G3DSA:3.40.309.10 218 368 3.3E-151 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 M892_07125 42406ad25b25eaaa2d58d5ed4bcba9a4 411 PIRSF PIRSF000151 1 411 9.0E-164 T 12-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 M892_07125 42406ad25b25eaaa2d58d5ed4bcba9a4 411 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 5 400 3.8E-166 T 12-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 M892_07125 42406ad25b25eaaa2d58d5ed4bcba9a4 411 Pfam PF00171 Aldehyde dehydrogenase family 3 274 1.9E-15 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 M892_07125 42406ad25b25eaaa2d58d5ed4bcba9a4 411 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 317 338 - T 12-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 M892_07125 42406ad25b25eaaa2d58d5ed4bcba9a4 411 Gene3D G3DSA:3.40.605.10 10 403 3.3E-151 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 M892_22160 d5ea2280d718c0d75b79b1e51f158536 408 Pfam PF13005 zinc-finger binding domain of transposase IS66 14 58 1.2E-16 T 12-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 M892_22160 d5ea2280d718c0d75b79b1e51f158536 408 Pfam PF03050 Transposase IS66 family 78 361 2.5E-101 T 12-10-2018 IPR004291 Transposase, IS66 M892_22160 d5ea2280d718c0d75b79b1e51f158536 408 Pfam PF13817 IS66 C-terminal element 368 404 5.6E-8 T 12-10-2018 IPR039552 Transposase IS66, C-terminal M892_14910 566db1328f3c5b52d5b4b5957b56cfae 251 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 11 239 39.741 T 12-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 M892_14910 566db1328f3c5b52d5b4b5957b56cfae 251 Pfam PF01255 Putative undecaprenyl diphosphate synthase 18 238 7.0E-81 T 12-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 M892_14910 566db1328f3c5b52d5b4b5957b56cfae 251 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 184 201 - T 12-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 M892_14910 566db1328f3c5b52d5b4b5957b56cfae 251 Gene3D G3DSA:3.40.1180.10 1 239 4.3E-94 T 12-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 M892_14910 566db1328f3c5b52d5b4b5957b56cfae 251 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 11 238 6.5E-94 T 12-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 M892_14910 566db1328f3c5b52d5b4b5957b56cfae 251 SUPERFAMILY SSF64005 9 234 2.62E-88 T 12-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 M892_09095 b9007fa1a2df61c8c3d8fa564c2cd95a 330 Gene3D G3DSA:1.10.150.20 245 330 1.4E-38 T 12-10-2018 M892_09095 b9007fa1a2df61c8c3d8fa564c2cd95a 330 SUPERFAMILY SSF47789 252 326 1.44E-25 T 12-10-2018 M892_09095 b9007fa1a2df61c8c3d8fa564c2cd95a 330 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 317 1.9E-111 T 12-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M892_09095 b9007fa1a2df61c8c3d8fa564c2cd95a 330 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 318 34.582 T 12-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M892_09095 b9007fa1a2df61c8c3d8fa564c2cd95a 330 SMART SM00662 23 235 8.6E-102 T 12-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M892_09095 b9007fa1a2df61c8c3d8fa564c2cd95a 330 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 229 1.5E-22 T 12-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M892_09095 b9007fa1a2df61c8c3d8fa564c2cd95a 330 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 246 309 7.1E-24 T 12-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M892_09095 b9007fa1a2df61c8c3d8fa564c2cd95a 330 Gene3D G3DSA:3.30.1360.10 17 229 2.1E-83 T 12-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M892_09095 b9007fa1a2df61c8c3d8fa564c2cd95a 330 SUPERFAMILY SSF56553 53 179 7.67E-40 T 12-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M892_09095 b9007fa1a2df61c8c3d8fa564c2cd95a 330 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 257 330 2.0E-36 T 12-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M892_09095 b9007fa1a2df61c8c3d8fa564c2cd95a 330 SUPERFAMILY SSF55257 7 234 3.53E-30 T 12-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M892_09095 b9007fa1a2df61c8c3d8fa564c2cd95a 330 Gene3D G3DSA:2.170.120.12 53 178 2.1E-83 T 12-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M892_09095 b9007fa1a2df61c8c3d8fa564c2cd95a 330 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 62 157 4.1E-24 T 12-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M892_02635 0caa42e1b72cd23238e4cbf4a50d4b6e 347 SUPERFAMILY SSF46689 16 131 2.09E-25 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_02635 0caa42e1b72cd23238e4cbf4a50d4b6e 347 SUPERFAMILY SSF53098 221 318 1.82E-7 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_02635 0caa42e1b72cd23238e4cbf4a50d4b6e 347 Pfam PF13358 DDE superfamily endonuclease 169 312 3.0E-34 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_02635 0caa42e1b72cd23238e4cbf4a50d4b6e 347 Pfam PF13551 Winged helix-turn helix 32 87 2.3E-8 T 12-10-2018 M892_02635 0caa42e1b72cd23238e4cbf4a50d4b6e 347 Gene3D G3DSA:3.30.420.470 137 340 8.2E-12 T 12-10-2018 M892_02635 0caa42e1b72cd23238e4cbf4a50d4b6e 347 Pfam PF13592 Winged helix-turn helix 98 155 7.3E-20 T 12-10-2018 IPR025959 Winged helix-turn helix domain M892_03780 0caa42e1b72cd23238e4cbf4a50d4b6e 347 SUPERFAMILY SSF46689 16 131 2.09E-25 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_03780 0caa42e1b72cd23238e4cbf4a50d4b6e 347 SUPERFAMILY SSF53098 221 318 1.82E-7 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_03780 0caa42e1b72cd23238e4cbf4a50d4b6e 347 Pfam PF13358 DDE superfamily endonuclease 169 312 3.0E-34 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_03780 0caa42e1b72cd23238e4cbf4a50d4b6e 347 Pfam PF13551 Winged helix-turn helix 32 87 2.3E-8 T 12-10-2018 M892_03780 0caa42e1b72cd23238e4cbf4a50d4b6e 347 Gene3D G3DSA:3.30.420.470 137 340 8.2E-12 T 12-10-2018 M892_03780 0caa42e1b72cd23238e4cbf4a50d4b6e 347 Pfam PF13592 Winged helix-turn helix 98 155 7.3E-20 T 12-10-2018 IPR025959 Winged helix-turn helix domain M892_23340 0caa42e1b72cd23238e4cbf4a50d4b6e 347 SUPERFAMILY SSF46689 16 131 2.09E-25 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_23340 0caa42e1b72cd23238e4cbf4a50d4b6e 347 SUPERFAMILY SSF53098 221 318 1.82E-7 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_23340 0caa42e1b72cd23238e4cbf4a50d4b6e 347 Pfam PF13358 DDE superfamily endonuclease 169 312 3.0E-34 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_23340 0caa42e1b72cd23238e4cbf4a50d4b6e 347 Pfam PF13551 Winged helix-turn helix 32 87 2.3E-8 T 12-10-2018 M892_23340 0caa42e1b72cd23238e4cbf4a50d4b6e 347 Gene3D G3DSA:3.30.420.470 137 340 8.2E-12 T 12-10-2018 M892_23340 0caa42e1b72cd23238e4cbf4a50d4b6e 347 Pfam PF13592 Winged helix-turn helix 98 155 7.3E-20 T 12-10-2018 IPR025959 Winged helix-turn helix domain M892_27405 0caa42e1b72cd23238e4cbf4a50d4b6e 347 SUPERFAMILY SSF46689 16 131 2.09E-25 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_27405 0caa42e1b72cd23238e4cbf4a50d4b6e 347 SUPERFAMILY SSF53098 221 318 1.82E-7 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_27405 0caa42e1b72cd23238e4cbf4a50d4b6e 347 Pfam PF13358 DDE superfamily endonuclease 169 312 3.0E-34 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_27405 0caa42e1b72cd23238e4cbf4a50d4b6e 347 Pfam PF13551 Winged helix-turn helix 32 87 2.3E-8 T 12-10-2018 M892_27405 0caa42e1b72cd23238e4cbf4a50d4b6e 347 Gene3D G3DSA:3.30.420.470 137 340 8.2E-12 T 12-10-2018 M892_27405 0caa42e1b72cd23238e4cbf4a50d4b6e 347 Pfam PF13592 Winged helix-turn helix 98 155 7.3E-20 T 12-10-2018 IPR025959 Winged helix-turn helix domain M892_20290 0caa42e1b72cd23238e4cbf4a50d4b6e 347 SUPERFAMILY SSF46689 16 131 2.09E-25 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_20290 0caa42e1b72cd23238e4cbf4a50d4b6e 347 SUPERFAMILY SSF53098 221 318 1.82E-7 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_20290 0caa42e1b72cd23238e4cbf4a50d4b6e 347 Pfam PF13358 DDE superfamily endonuclease 169 312 3.0E-34 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_20290 0caa42e1b72cd23238e4cbf4a50d4b6e 347 Pfam PF13551 Winged helix-turn helix 32 87 2.3E-8 T 12-10-2018 M892_20290 0caa42e1b72cd23238e4cbf4a50d4b6e 347 Gene3D G3DSA:3.30.420.470 137 340 8.2E-12 T 12-10-2018 M892_20290 0caa42e1b72cd23238e4cbf4a50d4b6e 347 Pfam PF13592 Winged helix-turn helix 98 155 7.3E-20 T 12-10-2018 IPR025959 Winged helix-turn helix domain M892_21405 9e8ee897dd6a7933ea007d1bfa0d2df3 78 Gene3D G3DSA:1.20.20.10 1 78 1.0E-27 T 12-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_21405 9e8ee897dd6a7933ea007d1bfa0d2df3 78 PRINTS PR00124 ATP synthase C subunit signature 32 47 4.7E-11 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_21405 9e8ee897dd6a7933ea007d1bfa0d2df3 78 PRINTS PR00124 ATP synthase C subunit signature 11 30 4.7E-11 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_21405 9e8ee897dd6a7933ea007d1bfa0d2df3 78 PRINTS PR00124 ATP synthase C subunit signature 49 74 4.7E-11 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_21405 9e8ee897dd6a7933ea007d1bfa0d2df3 78 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 20 76 1.8E-27 T 12-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 M892_21405 9e8ee897dd6a7933ea007d1bfa0d2df3 78 SUPERFAMILY SSF81333 2 76 9.29E-17 T 12-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily M892_21405 9e8ee897dd6a7933ea007d1bfa0d2df3 78 ProSitePatterns PS00605 ATP synthase c subunit signature. 39 60 - T 12-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_21405 9e8ee897dd6a7933ea007d1bfa0d2df3 78 Hamap MF_01396 ATP synthase subunit c [atpH]. 9 74 13.56 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_21405 9e8ee897dd6a7933ea007d1bfa0d2df3 78 Pfam PF00137 ATP synthase subunit C 11 73 9.3E-9 T 12-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 M892_22280 d4f917b191cb12429679054aa3ee6c1b 258 Gene3D G3DSA:3.30.420.470 48 254 1.6E-13 T 12-10-2018 M892_22280 d4f917b191cb12429679054aa3ee6c1b 258 Pfam PF13592 Winged helix-turn helix 10 66 1.4E-21 T 12-10-2018 IPR025959 Winged helix-turn helix domain M892_22280 d4f917b191cb12429679054aa3ee6c1b 258 SUPERFAMILY SSF53098 135 218 6.53E-7 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_22280 d4f917b191cb12429679054aa3ee6c1b 258 Pfam PF13358 DDE superfamily endonuclease 79 221 2.5E-35 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_12360 12e1f1cae14385b3c573d98feab17247 62 Gene3D G3DSA:1.10.10.1100 1 55 2.5E-18 T 12-10-2018 M892_12360 12e1f1cae14385b3c573d98feab17247 62 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 52 2.8E-13 T 12-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain M892_13745 1648f8b4f79ecd38dbb40b5f96c49d9a 141 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 32 6.0E-10 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M892_13745 1648f8b4f79ecd38dbb40b5f96c49d9a 141 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M892_13745 1648f8b4f79ecd38dbb40b5f96c49d9a 141 PRINTS PR00813 Bacterial general secretion pathway protein G signature 11 36 1.9E-10 T 12-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 M892_13745 1648f8b4f79ecd38dbb40b5f96c49d9a 141 PRINTS PR00813 Bacterial general secretion pathway protein G signature 47 65 1.9E-10 T 12-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 M892_13745 1648f8b4f79ecd38dbb40b5f96c49d9a 141 Pfam PF07963 Prokaryotic N-terminal methylation motif 7 31 4.6E-11 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M892_13745 1648f8b4f79ecd38dbb40b5f96c49d9a 141 Gene3D G3DSA:3.30.700.10 12 141 3.5E-28 T 12-10-2018 M892_13745 1648f8b4f79ecd38dbb40b5f96c49d9a 141 SUPERFAMILY SSF54523 12 126 1.15E-22 T 12-10-2018 M892_13745 1648f8b4f79ecd38dbb40b5f96c49d9a 141 Pfam PF00114 Pilin (bacterial filament) 41 132 7.2E-10 T 12-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 M892_14575 6117550b9e7e8154c7bba02e7b8d29d7 305 Pfam PF03466 LysR substrate binding domain 90 294 3.2E-47 T 12-10-2018 IPR005119 LysR, substrate-binding M892_14575 6117550b9e7e8154c7bba02e7b8d29d7 305 Gene3D G3DSA:3.40.190.290 94 296 6.2E-35 T 12-10-2018 M892_14575 6117550b9e7e8154c7bba02e7b8d29d7 305 SUPERFAMILY SSF53850 92 296 5.29E-42 T 12-10-2018 M892_14575 6117550b9e7e8154c7bba02e7b8d29d7 305 SUPERFAMILY SSF46785 5 113 9.28E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_14575 6117550b9e7e8154c7bba02e7b8d29d7 305 Gene3D G3DSA:1.10.10.10 4 91 2.6E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_14575 6117550b9e7e8154c7bba02e7b8d29d7 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 7.8E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_14575 6117550b9e7e8154c7bba02e7b8d29d7 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 7.8E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_14575 6117550b9e7e8154c7bba02e7b8d29d7 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 7.8E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_14575 6117550b9e7e8154c7bba02e7b8d29d7 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 1.3E-14 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_13655 cecf9fb6578958a183108e8dea8e4388 947 Gene3D G3DSA:3.30.830.10 43 267 9.4E-67 T 12-10-2018 M892_13655 cecf9fb6578958a183108e8dea8e4388 947 Gene3D G3DSA:3.30.830.10 270 466 1.2E-33 T 12-10-2018 M892_13655 cecf9fb6578958a183108e8dea8e4388 947 SUPERFAMILY SSF63411 499 717 7.83E-41 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 M892_13655 cecf9fb6578958a183108e8dea8e4388 947 Gene3D G3DSA:3.30.830.10 739 930 6.5E-36 T 12-10-2018 M892_13655 cecf9fb6578958a183108e8dea8e4388 947 Gene3D G3DSA:3.30.830.10 521 726 1.7E-39 T 12-10-2018 M892_13655 cecf9fb6578958a183108e8dea8e4388 947 SUPERFAMILY SSF63411 45 254 4.5E-56 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 M892_13655 cecf9fb6578958a183108e8dea8e4388 947 Pfam PF05193 Peptidase M16 inactive domain 215 390 9.0E-32 T 12-10-2018 IPR007863 Peptidase M16, C-terminal M892_13655 cecf9fb6578958a183108e8dea8e4388 947 Pfam PF05193 Peptidase M16 inactive domain 682 855 7.0E-19 T 12-10-2018 IPR007863 Peptidase M16, C-terminal M892_13655 cecf9fb6578958a183108e8dea8e4388 947 SUPERFAMILY SSF63411 735 936 2.67E-41 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 M892_13655 cecf9fb6578958a183108e8dea8e4388 947 SUPERFAMILY SSF63411 272 463 6.67E-32 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 M892_13655 cecf9fb6578958a183108e8dea8e4388 947 Pfam PF00675 Insulinase (Peptidase family M16) 62 146 8.0E-17 T 12-10-2018 IPR011765 Peptidase M16, N-terminal M892_13655 cecf9fb6578958a183108e8dea8e4388 947 Pfam PF00675 Insulinase (Peptidase family M16) 536 641 9.8E-9 T 12-10-2018 IPR011765 Peptidase M16, N-terminal M892_06385 ae4b2cd2c6ba7562411fa286929fd1b0 634 Gene3D G3DSA:3.30.565.10 6 219 2.4E-74 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_06385 ae4b2cd2c6ba7562411fa286929fd1b0 634 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 30 39 - T 12-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 M892_06385 ae4b2cd2c6ba7562411fa286929fd1b0 634 SUPERFAMILY SSF54211 238 493 3.11E-98 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold M892_06385 ae4b2cd2c6ba7562411fa286929fd1b0 634 PIRSF PIRSF002583 1 634 8.5E-211 T 12-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 M892_06385 ae4b2cd2c6ba7562411fa286929fd1b0 634 SUPERFAMILY SSF110942 520 632 1.96E-33 T 12-10-2018 IPR037196 HSP90, C-terminal domain M892_06385 ae4b2cd2c6ba7562411fa286929fd1b0 634 Hamap MF_00505 Chaperone protein HtpG [htpG]. 7 632 32.141 T 12-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 M892_06385 ae4b2cd2c6ba7562411fa286929fd1b0 634 Gene3D G3DSA:3.30.230.80 237 409 1.5E-70 T 12-10-2018 M892_06385 ae4b2cd2c6ba7562411fa286929fd1b0 634 Gene3D G3DSA:1.20.120.790 501 632 9.2E-42 T 12-10-2018 IPR037196 HSP90, C-terminal domain M892_06385 ae4b2cd2c6ba7562411fa286929fd1b0 634 SMART SM00387 32 189 1.7E-5 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_06385 ae4b2cd2c6ba7562411fa286929fd1b0 634 Gene3D G3DSA:3.40.50.11260 410 500 1.8E-33 T 12-10-2018 M892_06385 ae4b2cd2c6ba7562411fa286929fd1b0 634 SUPERFAMILY SSF55874 10 217 1.44E-62 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_06385 ae4b2cd2c6ba7562411fa286929fd1b0 634 PRINTS PR00775 90kDa heat shock protein signature 195 213 2.1E-62 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal M892_06385 ae4b2cd2c6ba7562411fa286929fd1b0 634 PRINTS PR00775 90kDa heat shock protein signature 31 53 2.1E-62 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal M892_06385 ae4b2cd2c6ba7562411fa286929fd1b0 634 PRINTS PR00775 90kDa heat shock protein signature 98 115 2.1E-62 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal M892_06385 ae4b2cd2c6ba7562411fa286929fd1b0 634 PRINTS PR00775 90kDa heat shock protein signature 10 30 2.1E-62 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal M892_06385 ae4b2cd2c6ba7562411fa286929fd1b0 634 PRINTS PR00775 90kDa heat shock protein signature 80 97 2.1E-62 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal M892_06385 ae4b2cd2c6ba7562411fa286929fd1b0 634 PRINTS PR00775 90kDa heat shock protein signature 177 194 2.1E-62 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal M892_06385 ae4b2cd2c6ba7562411fa286929fd1b0 634 PRINTS PR00775 90kDa heat shock protein signature 125 147 2.1E-62 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal M892_06385 ae4b2cd2c6ba7562411fa286929fd1b0 634 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 30 176 3.8E-12 T 12-10-2018 M892_06385 ae4b2cd2c6ba7562411fa286929fd1b0 634 Pfam PF00183 Hsp90 protein 228 632 2.2E-126 T 12-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 M892_15075 8c450d5d3fac16f5d1bc863aea1c2b43 417 Pfam PF00860 Permease family 3 371 3.4E-90 T 12-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 M892_15075 8c450d5d3fac16f5d1bc863aea1c2b43 417 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 4 395 6.3E-110 T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 M892_15075 8c450d5d3fac16f5d1bc863aea1c2b43 417 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 319 339 - T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 M892_06335 b594aac330fe3df819a5ff850564c7cb 556 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 28 337 1.6E-126 T 12-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 M892_06335 b594aac330fe3df819a5ff850564c7cb 556 Gene3D G3DSA:1.10.1160.10 261 339 1.0E-35 T 12-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 M892_06335 b594aac330fe3df819a5ff850564c7cb 556 SUPERFAMILY SSF52374 11 337 1.69E-103 T 12-10-2018 M892_06335 b594aac330fe3df819a5ff850564c7cb 556 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 28 552 4.5E-298 T 12-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 M892_06335 b594aac330fe3df819a5ff850564c7cb 556 Gene3D G3DSA:3.40.50.620 30 247 6.0E-106 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M892_06335 b594aac330fe3df819a5ff850564c7cb 556 SUPERFAMILY SSF50715 340 548 8.89E-80 T 12-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 M892_06335 b594aac330fe3df819a5ff850564c7cb 556 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 550 54.021 T 12-10-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 M892_06335 b594aac330fe3df819a5ff850564c7cb 556 Gene3D G3DSA:3.90.800.10 101 209 6.0E-106 T 12-10-2018 M892_06335 b594aac330fe3df819a5ff850564c7cb 556 Gene3D G3DSA:2.40.240.10 464 548 1.6E-33 T 12-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 M892_06335 b594aac330fe3df819a5ff850564c7cb 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 60 73 6.0E-10 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 M892_06335 b594aac330fe3df819a5ff850564c7cb 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 43 6.0E-10 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 M892_06335 b594aac330fe3df819a5ff850564c7cb 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 45 56 6.0E-10 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 M892_06335 b594aac330fe3df819a5ff850564c7cb 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 220 6.0E-10 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 M892_06335 b594aac330fe3df819a5ff850564c7cb 556 Gene3D G3DSA:2.40.240.10 348 463 6.9E-47 T 12-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 M892_06335 b594aac330fe3df819a5ff850564c7cb 556 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 340 529 2.3E-63 T 12-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 M892_06335 b594aac330fe3df819a5ff850564c7cb 556 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 45 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 M892_03745 10a42f73d6414e11cd07a848a0c64794 257 Gene3D G3DSA:2.40.160.20 71 257 1.4E-9 T 12-10-2018 M892_03745 10a42f73d6414e11cd07a848a0c64794 257 SUPERFAMILY SSF56925 78 220 1.15E-16 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel M892_03745 10a42f73d6414e11cd07a848a0c64794 257 Pfam PF13505 Outer membrane protein beta-barrel domain 54 215 1.2E-13 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel M892_02795 43cfe467b8c48e582dbbc2f407350791 534 SMART SM00382 352 529 4.9E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_02795 43cfe467b8c48e582dbbc2f407350791 534 ProSitePatterns PS00211 ABC transporters family signature. 453 467 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_02795 43cfe467b8c48e582dbbc2f407350791 534 Pfam PF00005 ABC transporter 344 481 4.2E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_02795 43cfe467b8c48e582dbbc2f407350791 534 Gene3D G3DSA:3.40.50.300 320 533 2.0E-50 T 12-10-2018 M892_02795 43cfe467b8c48e582dbbc2f407350791 534 Gene3D G3DSA:1.20.1560.10 7 314 2.9E-26 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 M892_02795 43cfe467b8c48e582dbbc2f407350791 534 SUPERFAMILY SSF52540 322 529 1.9E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_02795 43cfe467b8c48e582dbbc2f407350791 534 Pfam PF00664 ABC transporter transmembrane region 54 260 1.7E-10 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 M892_02795 43cfe467b8c48e582dbbc2f407350791 534 SUPERFAMILY SSF90123 13 311 7.98E-33 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 M892_05385 8c8615082fd9479522616d69dc0d2c98 758 SUPERFAMILY SSF51998 4 757 4.81E-287 T 12-10-2018 M892_05385 8c8615082fd9479522616d69dc0d2c98 758 PIRSF PIRSF000379 5 758 0.0 T 12-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 M892_05385 8c8615082fd9479522616d69dc0d2c98 758 Gene3D G3DSA:3.20.70.20 1 758 0.0 T 12-10-2018 M892_05385 8c8615082fd9479522616d69dc0d2c98 758 ProSitePatterns PS00850 Glycine radical domain signature. 728 736 - T 12-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site M892_05385 8c8615082fd9479522616d69dc0d2c98 758 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 8 758 0.0 T 12-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 M892_05385 8c8615082fd9479522616d69dc0d2c98 758 Pfam PF02901 Pyruvate formate lyase-like 21 612 9.1E-204 T 12-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 M892_05385 8c8615082fd9479522616d69dc0d2c98 758 Pfam PF01228 Glycine radical 628 739 2.6E-43 T 12-10-2018 IPR001150 Glycine radical domain GO:0003824 M892_05075 61238b2cb6c8c5c679efe66246efb12a 442 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 9 439 6.3E-168 T 12-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 M892_05075 61238b2cb6c8c5c679efe66246efb12a 442 Pfam PF07676 WD40-like Beta Propeller Repeat 249 284 1.8E-6 T 12-10-2018 IPR011659 WD40-like Beta Propeller M892_05075 61238b2cb6c8c5c679efe66246efb12a 442 Pfam PF07676 WD40-like Beta Propeller Repeat 214 240 2.8E-8 T 12-10-2018 IPR011659 WD40-like Beta Propeller M892_05075 61238b2cb6c8c5c679efe66246efb12a 442 Pfam PF07676 WD40-like Beta Propeller Repeat 292 328 4.2E-14 T 12-10-2018 IPR011659 WD40-like Beta Propeller M892_05075 61238b2cb6c8c5c679efe66246efb12a 442 SUPERFAMILY SSF52964 21 173 4.97E-41 T 12-10-2018 M892_05075 61238b2cb6c8c5c679efe66246efb12a 442 Gene3D G3DSA:3.40.50.10070 15 176 1.4E-48 T 12-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 M892_05075 61238b2cb6c8c5c679efe66246efb12a 442 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 1 438 52.242 T 12-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 M892_05075 61238b2cb6c8c5c679efe66246efb12a 442 Pfam PF04052 TolB amino-terminal domain 16 118 5.0E-35 T 12-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 M892_05075 61238b2cb6c8c5c679efe66246efb12a 442 SUPERFAMILY SSF69304 168 440 4.18E-57 T 12-10-2018 M892_05075 61238b2cb6c8c5c679efe66246efb12a 442 Gene3D G3DSA:2.120.10.30 177 442 1.4E-97 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like M892_12420 b52336d79e0028ed7bc2816a450d7c39 404 Gene3D G3DSA:3.90.1260.10 68 356 1.1E-144 T 12-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 M892_12420 b52336d79e0028ed7bc2816a450d7c39 404 Pfam PF00764 Arginosuccinate synthase 10 396 6.2E-146 T 12-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 M892_12420 b52336d79e0028ed7bc2816a450d7c39 404 SUPERFAMILY SSF69864 177 402 4.32E-87 T 12-10-2018 M892_12420 b52336d79e0028ed7bc2816a450d7c39 404 Gene3D G3DSA:1.20.5.470 368 403 1.8E-8 T 12-10-2018 M892_12420 b52336d79e0028ed7bc2816a450d7c39 404 Gene3D G3DSA:3.40.50.620 9 177 1.1E-144 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M892_12420 b52336d79e0028ed7bc2816a450d7c39 404 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 12 20 - T 12-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 M892_12420 b52336d79e0028ed7bc2816a450d7c39 404 SUPERFAMILY SSF52402 7 170 1.12E-47 T 12-10-2018 M892_12420 b52336d79e0028ed7bc2816a450d7c39 404 TIGRFAM TIGR00032 argG: argininosuccinate synthase 8 395 8.0E-136 T 12-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 M892_12420 b52336d79e0028ed7bc2816a450d7c39 404 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 121 132 - T 12-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 M892_12420 b52336d79e0028ed7bc2816a450d7c39 404 Hamap MF_00005 Argininosuccinate synthase [argG]. 6 402 51.623 T 12-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 M892_09955 29950a36f8a4c37c194eaf83f8ff0275 219 SUPERFAMILY SSF52540 6 197 7.65E-34 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_09955 29950a36f8a4c37c194eaf83f8ff0275 219 Pfam PF01926 50S ribosome-binding GTPase 29 147 1.9E-20 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 M892_09955 29950a36f8a4c37c194eaf83f8ff0275 219 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 11 194 1.9E-74 T 12-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 M892_09955 29950a36f8a4c37c194eaf83f8ff0275 219 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 15 198 27.634 T 12-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 M892_09955 29950a36f8a4c37c194eaf83f8ff0275 219 Gene3D G3DSA:3.40.50.300 3 202 2.0E-58 T 12-10-2018 M892_08635 43794a69eb4af1b565cb6aa3232efbd7 586 Pfam PF01807 CHC2 zinc finger 6 101 2.9E-41 T 12-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 M892_08635 43794a69eb4af1b565cb6aa3232efbd7 586 PIRSF PIRSF002811 2 585 4.1E-143 T 12-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 M892_08635 43794a69eb4af1b565cb6aa3232efbd7 586 Pfam PF13155 Toprim-like 270 356 2.1E-13 T 12-10-2018 M892_08635 43794a69eb4af1b565cb6aa3232efbd7 586 Pfam PF08278 DNA primase DnaG DnaB-binding 457 580 2.1E-36 T 12-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 M892_08635 43794a69eb4af1b565cb6aa3232efbd7 586 SUPERFAMILY SSF117023 453 584 9.68E-45 T 12-10-2018 M892_08635 43794a69eb4af1b565cb6aa3232efbd7 586 SMART SM00400 36 90 5.7E-37 T 12-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 M892_08635 43794a69eb4af1b565cb6aa3232efbd7 586 Pfam PF08275 DNA primase catalytic core, N-terminal domain 133 257 9.5E-42 T 12-10-2018 IPR013264 DNA primase, catalytic core, N-terminal M892_08635 43794a69eb4af1b565cb6aa3232efbd7 586 SMART SM00493 266 337 4.9E-19 T 12-10-2018 IPR006171 TOPRIM domain M892_08635 43794a69eb4af1b565cb6aa3232efbd7 586 TIGRFAM TIGR01391 dnaG: DNA primase 5 425 1.5E-146 T 12-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 M892_08635 43794a69eb4af1b565cb6aa3232efbd7 586 SUPERFAMILY SSF56731 123 431 1.44E-110 T 12-10-2018 M892_08635 43794a69eb4af1b565cb6aa3232efbd7 586 Gene3D G3DSA:3.90.580.10 1 102 1.5E-39 T 12-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 M892_08635 43794a69eb4af1b565cb6aa3232efbd7 586 Gene3D G3DSA:3.90.980.10 122 247 5.2E-46 T 12-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily M892_08635 43794a69eb4af1b565cb6aa3232efbd7 586 Pfam PF10410 DnaB-helicase binding domain of primase 377 431 8.2E-8 T 12-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 M892_08635 43794a69eb4af1b565cb6aa3232efbd7 586 Gene3D G3DSA:1.10.860.10 444 586 1.0E-58 T 12-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal M892_08635 43794a69eb4af1b565cb6aa3232efbd7 586 Hamap MF_00974 DNA primase [dnaG]. 4 582 29.176 T 12-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 M892_08635 43794a69eb4af1b565cb6aa3232efbd7 586 Gene3D G3DSA:1.20.50.20 375 433 3.1E-8 T 12-10-2018 M892_08635 43794a69eb4af1b565cb6aa3232efbd7 586 SUPERFAMILY SSF57783 4 101 4.93E-38 T 12-10-2018 M892_08635 43794a69eb4af1b565cb6aa3232efbd7 586 Gene3D G3DSA:3.40.1360.10 248 374 2.3E-42 T 12-10-2018 M892_08635 43794a69eb4af1b565cb6aa3232efbd7 586 SMART SM00766 456 581 3.2E-57 T 12-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 M892_23080 e25e3ab40ac6c19e3fa5c73bb0ff789f 706 ProSitePatterns PS00850 Glycine radical domain signature. 676 684 - T 12-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site M892_23080 e25e3ab40ac6c19e3fa5c73bb0ff789f 706 Gene3D G3DSA:3.20.70.20 121 687 7.0E-232 T 12-10-2018 M892_23080 e25e3ab40ac6c19e3fa5c73bb0ff789f 706 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 116 705 1.6E-180 T 12-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 M892_23080 e25e3ab40ac6c19e3fa5c73bb0ff789f 706 Pfam PF03477 ATP cone domain 4 89 2.5E-22 T 12-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 M892_23080 e25e3ab40ac6c19e3fa5c73bb0ff789f 706 SUPERFAMILY SSF51998 121 687 2.66E-191 T 12-10-2018 M892_23080 e25e3ab40ac6c19e3fa5c73bb0ff789f 706 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 115 705 4.1E-198 T 12-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 M892_18870 7ef6d88b401a0f7b919d6fdbc3b35706 678 SUPERFAMILY SSF101898 327 635 1.18E-7 T 12-10-2018 M892_18870 7ef6d88b401a0f7b919d6fdbc3b35706 678 Pfam PF05787 Bacterial protein of unknown function (DUF839) 74 641 3.3E-150 T 12-10-2018 IPR008557 Protein of unknown function DUF839 M892_03875 107b6cfa59265d10d9ea9a3184dc3d31 129 Pfam PF11042 Protein of unknown function (DUF2750) 23 122 1.1E-37 T 12-10-2018 IPR021284 Protein of unknown function DUF2750 M892_09850 2a8ff56231864417d8eac23f5b2e03af 542 PIRSF PIRSF006294 4 541 1.4E-228 T 12-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 M892_09850 2a8ff56231864417d8eac23f5b2e03af 542 Gene3D G3DSA:3.40.449.10 25 235 3.1E-236 T 12-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 M892_09850 2a8ff56231864417d8eac23f5b2e03af 542 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 10 541 1.4E-277 T 12-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 M892_09850 2a8ff56231864417d8eac23f5b2e03af 542 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 18 539 55.316 T 12-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 M892_09850 2a8ff56231864417d8eac23f5b2e03af 542 Pfam PF01293 Phosphoenolpyruvate carboxykinase 24 491 8.1E-212 T 12-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 M892_09850 2a8ff56231864417d8eac23f5b2e03af 542 Gene3D G3DSA:3.90.228.20 236 526 3.1E-236 T 12-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 M892_09850 2a8ff56231864417d8eac23f5b2e03af 542 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 266 281 - T 12-10-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 M892_09850 2a8ff56231864417d8eac23f5b2e03af 542 SUPERFAMILY SSF53795 230 541 6.02E-128 T 12-10-2018 M892_09850 2a8ff56231864417d8eac23f5b2e03af 542 SUPERFAMILY SSF68923 11 228 1.45E-88 T 12-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 M892_09850 2a8ff56231864417d8eac23f5b2e03af 542 Gene3D G3DSA:2.170.8.10 49 351 3.1E-236 T 12-10-2018 M892_26310 78d11990a1fadd5b6e29c8abb87cbc55 339 SUPERFAMILY SSF48029 122 330 4.71E-53 T 12-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical M892_26310 78d11990a1fadd5b6e29c8abb87cbc55 339 Pfam PF14841 FliG middle domain 123 196 4.5E-20 T 12-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain M892_26310 78d11990a1fadd5b6e29c8abb87cbc55 339 Gene3D G3DSA:1.10.220.30 96 199 2.0E-22 T 12-10-2018 M892_26310 78d11990a1fadd5b6e29c8abb87cbc55 339 Gene3D G3DSA:1.10.220.30 202 335 8.5E-25 T 12-10-2018 M892_26310 78d11990a1fadd5b6e29c8abb87cbc55 339 Pfam PF14842 FliG N-terminal domain 15 109 2.0E-22 T 12-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain M892_26310 78d11990a1fadd5b6e29c8abb87cbc55 339 Pfam PF01706 FliG C-terminal domain 224 330 7.0E-24 T 12-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal M892_26310 78d11990a1fadd5b6e29c8abb87cbc55 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 232 252 2.3E-27 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 M892_26310 78d11990a1fadd5b6e29c8abb87cbc55 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 12 28 2.3E-27 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 M892_26310 78d11990a1fadd5b6e29c8abb87cbc55 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 278 304 2.3E-27 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 M892_26310 78d11990a1fadd5b6e29c8abb87cbc55 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 121 144 2.3E-27 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 M892_26310 78d11990a1fadd5b6e29c8abb87cbc55 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 254 274 2.3E-27 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 M892_26310 78d11990a1fadd5b6e29c8abb87cbc55 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 41 67 2.3E-27 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 M892_26310 78d11990a1fadd5b6e29c8abb87cbc55 339 SUPERFAMILY SSF48029 13 114 3.14E-18 T 12-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical M892_26310 78d11990a1fadd5b6e29c8abb87cbc55 339 Gene3D G3DSA:1.10.220.30 5 92 1.2E-17 T 12-10-2018 M892_25500 505a94fd0e806dc1c911de86c22c6d86 218 Gene3D G3DSA:1.10.10.10 152 218 8.4E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_25500 505a94fd0e806dc1c911de86c22c6d86 218 ProSitePatterns PS00622 LuxR-type HTH domain signature. 174 201 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_25500 505a94fd0e806dc1c911de86c22c6d86 218 SUPERFAMILY SSF46894 152 216 2.11E-20 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M892_25500 505a94fd0e806dc1c911de86c22c6d86 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 160 174 1.8E-13 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_25500 505a94fd0e806dc1c911de86c22c6d86 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 190 202 1.8E-13 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_25500 505a94fd0e806dc1c911de86c22c6d86 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 174 190 1.8E-13 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_25500 505a94fd0e806dc1c911de86c22c6d86 218 Pfam PF00196 Bacterial regulatory proteins, luxR family 159 214 1.3E-21 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_25500 505a94fd0e806dc1c911de86c22c6d86 218 SMART SM00421 157 214 4.6E-23 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_25500 505a94fd0e806dc1c911de86c22c6d86 218 Gene3D G3DSA:3.40.50.2300 12 148 1.2E-27 T 12-10-2018 M892_01760 2c96adcc12a415a8b9b42efe7efe2997 149 SUPERFAMILY SSF46689 6 111 4.12E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_01760 2c96adcc12a415a8b9b42efe7efe2997 149 Pfam PF13518 Helix-turn-helix domain 7 59 3.8E-8 T 12-10-2018 M892_06250 8a75b962c07916667758226f960be532 941 SUPERFAMILY SSF52518 122 536 6.62E-88 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold M892_06250 8a75b962c07916667758226f960be532 941 SMART SM00861 594 787 1.5E-64 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain M892_06250 8a75b962c07916667758226f960be532 941 Gene3D G3DSA:3.40.50.11610 724 930 6.9E-173 T 12-10-2018 M892_06250 8a75b962c07916667758226f960be532 941 Gene3D G3DSA:3.40.50.970 168 534 6.3E-145 T 12-10-2018 M892_06250 8a75b962c07916667758226f960be532 941 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 51 6.8E-14 T 12-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 M892_06250 8a75b962c07916667758226f960be532 941 Pfam PF02779 Transketolase, pyrimidine binding domain 593 788 3.9E-66 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain M892_06250 8a75b962c07916667758226f960be532 941 Gene3D G3DSA:1.10.287.1150 85 167 2.1E-30 T 12-10-2018 M892_06250 8a75b962c07916667758226f960be532 941 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 15 933 0.0 T 12-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 M892_06250 8a75b962c07916667758226f960be532 941 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 791 933 4.6E-55 T 12-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 M892_06250 8a75b962c07916667758226f960be532 941 Pfam PF00676 Dehydrogenase E1 component 221 515 1.5E-48 T 12-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 M892_06250 8a75b962c07916667758226f960be532 941 SUPERFAMILY SSF52518 577 794 2.1E-52 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold M892_06250 8a75b962c07916667758226f960be532 941 Gene3D G3DSA:3.40.50.12470 557 803 6.9E-173 T 12-10-2018 M892_06250 8a75b962c07916667758226f960be532 941 PIRSF PIRSF000157 1 935 0.0 T 12-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 M892_24005 cf7f745564a460a9d8c1329beaed130c 391 Gene3D G3DSA:3.20.20.70 29 390 9.1E-111 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M892_24005 cf7f745564a460a9d8c1329beaed130c 391 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 31 364 9.7E-68 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 M892_24005 cf7f745564a460a9d8c1329beaed130c 391 SUPERFAMILY SSF51395 24 376 2.51E-100 T 12-10-2018 M892_23380 3b0e82f010a34a99b67eb6b76c0265be 266 SUPERFAMILY SSF53098 103 260 1.52E-48 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_23380 3b0e82f010a34a99b67eb6b76c0265be 266 Pfam PF00665 Integrase core domain 105 216 9.7E-26 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 M892_23380 3b0e82f010a34a99b67eb6b76c0265be 266 Pfam PF13276 HTH-like domain 28 83 7.8E-14 T 12-10-2018 IPR025948 HTH-like domain M892_23380 3b0e82f010a34a99b67eb6b76c0265be 266 Gene3D G3DSA:3.30.420.10 92 259 1.4E-17 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M892_07470 3b0e82f010a34a99b67eb6b76c0265be 266 SUPERFAMILY SSF53098 103 260 1.52E-48 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_07470 3b0e82f010a34a99b67eb6b76c0265be 266 Pfam PF00665 Integrase core domain 105 216 9.7E-26 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 M892_07470 3b0e82f010a34a99b67eb6b76c0265be 266 Pfam PF13276 HTH-like domain 28 83 7.8E-14 T 12-10-2018 IPR025948 HTH-like domain M892_07470 3b0e82f010a34a99b67eb6b76c0265be 266 Gene3D G3DSA:3.30.420.10 92 259 1.4E-17 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M892_02240 3674396e1a959c18c5aeb925bec27ec3 375 SUPERFAMILY SSF53756 11 373 8.37E-24 T 12-10-2018 M892_02240 3674396e1a959c18c5aeb925bec27ec3 375 Gene3D G3DSA:3.40.50.2000 203 351 8.0E-31 T 12-10-2018 M892_02240 3674396e1a959c18c5aeb925bec27ec3 375 Pfam PF13692 Glycosyl transferases group 1 217 346 4.6E-9 T 12-10-2018 M892_11835 07957371e8a6792cce72c03c18cb8548 483 PRINTS PR00149 Fumarate lyase superfamily signature 193 211 4.2E-26 T 12-10-2018 IPR000362 Fumarate lyase family M892_11835 07957371e8a6792cce72c03c18cb8548 483 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 4.2E-26 T 12-10-2018 IPR000362 Fumarate lyase family M892_11835 07957371e8a6792cce72c03c18cb8548 483 PRINTS PR00149 Fumarate lyase superfamily signature 330 346 4.2E-26 T 12-10-2018 IPR000362 Fumarate lyase family M892_11835 07957371e8a6792cce72c03c18cb8548 483 PRINTS PR00149 Fumarate lyase superfamily signature 284 311 4.2E-26 T 12-10-2018 IPR000362 Fumarate lyase family M892_11835 07957371e8a6792cce72c03c18cb8548 483 Pfam PF10415 Fumarase C C-terminus 421 473 3.4E-17 T 12-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 M892_11835 07957371e8a6792cce72c03c18cb8548 483 ProSitePatterns PS00163 Fumarate lyases signature. 330 339 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 M892_11835 07957371e8a6792cce72c03c18cb8548 483 Gene3D G3DSA:1.20.200.10 153 420 5.6E-113 T 12-10-2018 M892_11835 07957371e8a6792cce72c03c18cb8548 483 Gene3D G3DSA:1.10.40.30 421 470 1.6E-28 T 12-10-2018 M892_11835 07957371e8a6792cce72c03c18cb8548 483 SUPERFAMILY SSF48557 14 467 5.89E-144 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 M892_11835 07957371e8a6792cce72c03c18cb8548 483 Gene3D G3DSA:1.10.275.10 16 152 1.2E-58 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal M892_11835 07957371e8a6792cce72c03c18cb8548 483 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 16 482 4.4E-252 T 12-10-2018 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 M892_11835 07957371e8a6792cce72c03c18cb8548 483 Pfam PF00206 Lyase 23 355 1.1E-101 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal M892_18880 07054a46c705c0ef15cf0a57d81431fc 686 SMART SM00387 577 686 4.0E-22 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_18880 07054a46c705c0ef15cf0a57d81431fc 686 Gene3D G3DSA:3.30.450.20 59 174 1.5E-11 T 12-10-2018 M892_18880 07054a46c705c0ef15cf0a57d81431fc 686 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 309 436 5.7E-15 T 12-10-2018 IPR000014 PAS domain M892_18880 07054a46c705c0ef15cf0a57d81431fc 686 SMART SM00086 389 429 2.2E-4 T 12-10-2018 IPR001610 PAC motif M892_18880 07054a46c705c0ef15cf0a57d81431fc 686 SUPERFAMILY SSF47384 457 532 1.69E-6 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M892_18880 07054a46c705c0ef15cf0a57d81431fc 686 PRINTS PR00344 Bacterial sensor protein C-terminal signature 616 630 1.3E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_18880 07054a46c705c0ef15cf0a57d81431fc 686 PRINTS PR00344 Bacterial sensor protein C-terminal signature 647 665 1.3E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_18880 07054a46c705c0ef15cf0a57d81431fc 686 PRINTS PR00344 Bacterial sensor protein C-terminal signature 634 644 1.3E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_18880 07054a46c705c0ef15cf0a57d81431fc 686 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 577 684 1.9E-19 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_18880 07054a46c705c0ef15cf0a57d81431fc 686 SUPERFAMILY SSF55785 301 427 1.73E-12 T 12-10-2018 IPR035965 PAS domain superfamily M892_18880 07054a46c705c0ef15cf0a57d81431fc 686 SUPERFAMILY SSF55874 530 684 6.55E-31 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_18880 07054a46c705c0ef15cf0a57d81431fc 686 PIRSF PIRSF036431 1 332 5.2E-42 T 12-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) M892_18880 07054a46c705c0ef15cf0a57d81431fc 686 PIRSF PIRSF036431 319 686 3.5E-102 T 12-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) M892_18880 07054a46c705c0ef15cf0a57d81431fc 686 Gene3D G3DSA:1.10.287.130 445 532 1.7E-13 T 12-10-2018 M892_18880 07054a46c705c0ef15cf0a57d81431fc 686 Gene3D G3DSA:3.30.565.10 537 686 6.6E-33 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_18880 07054a46c705c0ef15cf0a57d81431fc 686 Pfam PF13426 PAS domain 324 427 1.1E-5 T 12-10-2018 IPR000014 PAS domain M892_18880 07054a46c705c0ef15cf0a57d81431fc 686 Gene3D G3DSA:3.30.450.20 300 426 9.3E-14 T 12-10-2018 M892_18880 07054a46c705c0ef15cf0a57d81431fc 686 SMART SM00091 313 380 0.0094 T 12-10-2018 IPR000014 PAS domain M892_08075 94a2df5ecc546cd00b2d938d047ac18b 226 SUPERFAMILY SSF52980 2 220 2.31E-81 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 M892_08075 94a2df5ecc546cd00b2d938d047ac18b 226 Hamap MF_00759 DNA mismatch repair protein MutH [mutH]. 1 226 148.318 T 12-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 M892_08075 94a2df5ecc546cd00b2d938d047ac18b 226 Pfam PF02976 DNA mismatch repair enzyme MutH 53 151 1.4E-33 T 12-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 M892_08075 94a2df5ecc546cd00b2d938d047ac18b 226 Gene3D G3DSA:3.40.600.10 1 222 1.2E-56 T 12-10-2018 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily GO:0003677|GO:0004519 M892_08075 94a2df5ecc546cd00b2d938d047ac18b 226 SMART SM00927 53 151 1.7E-64 T 12-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 M892_08075 94a2df5ecc546cd00b2d938d047ac18b 226 TIGRFAM TIGR02248 mutH_TIGR: DNA mismatch repair endonuclease MutH 5 219 6.3E-101 T 12-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 M892_00160 545b2fad8c0c997532a233940329f0e3 327 SUPERFAMILY SSF52821 193 314 1.44E-28 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily M892_00160 545b2fad8c0c997532a233940329f0e3 327 SUPERFAMILY SSF52821 45 181 5.63E-21 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily M892_00160 545b2fad8c0c997532a233940329f0e3 327 Gene3D G3DSA:3.40.250.10 193 321 6.9E-31 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily M892_00160 545b2fad8c0c997532a233940329f0e3 327 Gene3D G3DSA:3.40.250.10 35 189 4.3E-23 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily M892_00160 545b2fad8c0c997532a233940329f0e3 327 SMART SM00450 16 169 0.68 T 12-10-2018 IPR001763 Rhodanese-like domain M892_00160 545b2fad8c0c997532a233940329f0e3 327 SMART SM00450 195 314 1.7E-17 T 12-10-2018 IPR001763 Rhodanese-like domain M892_00160 545b2fad8c0c997532a233940329f0e3 327 ProSitePatterns PS00683 Rhodanese C-terminal signature. 298 308 - T 12-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 M892_00160 545b2fad8c0c997532a233940329f0e3 327 Pfam PF00581 Rhodanese-like domain 101 164 5.4E-8 T 12-10-2018 IPR001763 Rhodanese-like domain M892_00160 545b2fad8c0c997532a233940329f0e3 327 Pfam PF00581 Rhodanese-like domain 201 309 7.0E-13 T 12-10-2018 IPR001763 Rhodanese-like domain M892_06920 89e77b073323885face8a67b1a412d6f 416 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 12-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 M892_06920 89e77b073323885face8a67b1a412d6f 416 PIRSF PIRSF000412 1 416 9.4E-170 T 12-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 M892_06920 89e77b073323885face8a67b1a412d6f 416 SUPERFAMILY SSF53383 6 415 3.58E-185 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M892_06920 89e77b073323885face8a67b1a412d6f 416 Gene3D G3DSA:3.90.1150.10 10 396 3.3E-187 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M892_06920 89e77b073323885face8a67b1a412d6f 416 Pfam PF00464 Serine hydroxymethyltransferase 8 385 8.9E-184 T 12-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 M892_06920 89e77b073323885face8a67b1a412d6f 416 Gene3D G3DSA:3.40.640.10 37 288 3.3E-187 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M892_06920 89e77b073323885face8a67b1a412d6f 416 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 416 52.63 T 12-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 M892_00940 870fcaef9938c78526a32df3c9b7f968 171 Gene3D G3DSA:2.40.160.20 18 170 2.2E-26 T 12-10-2018 M892_00940 870fcaef9938c78526a32df3c9b7f968 171 SUPERFAMILY SSF56925 17 170 2.88E-29 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel M892_00940 870fcaef9938c78526a32df3c9b7f968 171 Pfam PF13505 Outer membrane protein beta-barrel domain 6 170 1.2E-20 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel M892_20375 1df5f3aea535a15e63cb7dd7d5b88f1a 308 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_20375 1df5f3aea535a15e63cb7dd7d5b88f1a 308 SMART SM00382 30 212 2.0E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_20375 1df5f3aea535a15e63cb7dd7d5b88f1a 308 Pfam PF00005 ABC transporter 22 165 2.6E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_20375 1df5f3aea535a15e63cb7dd7d5b88f1a 308 SUPERFAMILY SSF52540 4 227 3.99E-67 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_20375 1df5f3aea535a15e63cb7dd7d5b88f1a 308 Gene3D G3DSA:3.40.50.300 1 243 1.3E-71 T 12-10-2018 M892_16215 70991b70abd81bceb605501dd92f4c40 158 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 2 158 36.085 T 12-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 M892_16215 70991b70abd81bceb605501dd92f4c40 158 SUPERFAMILY SSF55040 11 155 1.83E-61 T 12-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 M892_16215 70991b70abd81bceb605501dd92f4c40 158 Pfam PF01967 MoaC family 15 150 9.6E-56 T 12-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 M892_16215 70991b70abd81bceb605501dd92f4c40 158 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 5.9E-72 T 12-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 M892_16215 70991b70abd81bceb605501dd92f4c40 158 Gene3D G3DSA:3.30.70.640 1 158 7.1E-70 T 12-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 M892_16710 e054f2d0a082af8b7e5392384ef83071 170 SUPERFAMILY SSF52833 41 162 1.07E-23 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M892_16710 e054f2d0a082af8b7e5392384ef83071 170 Gene3D G3DSA:3.40.30.10 26 167 5.2E-19 T 12-10-2018 M892_16710 e054f2d0a082af8b7e5392384ef83071 170 Pfam PF00085 Thioredoxin 51 159 1.0E-10 T 12-10-2018 IPR013766 Thioredoxin domain GO:0045454 M892_16710 e054f2d0a082af8b7e5392384ef83071 170 ProSitePatterns PS00194 Thioredoxin family active site. 69 87 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 M892_25690 757a8874b94b7b179b80d0e995620d88 376 Gene3D G3DSA:2.40.30.170 257 342 1.4E-34 T 12-10-2018 M892_25690 757a8874b94b7b179b80d0e995620d88 376 Gene3D G3DSA:2.40.50.100 62 256 1.4E-34 T 12-10-2018 M892_25690 757a8874b94b7b179b80d0e995620d88 376 Pfam PF13533 Biotin-lipoyl like 65 111 9.4E-9 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain M892_25690 757a8874b94b7b179b80d0e995620d88 376 Gene3D G3DSA:1.10.287.470 96 219 1.4E-34 T 12-10-2018 M892_25690 757a8874b94b7b179b80d0e995620d88 376 SUPERFAMILY SSF111369 62 183 1.7E-9 T 12-10-2018 M892_11615 7b4c4d5df1a88e7f093a07fe67a25cc3 523 SUPERFAMILY SSF46894 6 103 4.25E-17 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M892_11615 7b4c4d5df1a88e7f093a07fe67a25cc3 523 Pfam PF00486 Transcriptional regulatory protein, C terminal 25 100 3.9E-15 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M892_11615 7b4c4d5df1a88e7f093a07fe67a25cc3 523 SMART SM00862 24 100 3.5E-13 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M892_11615 7b4c4d5df1a88e7f093a07fe67a25cc3 523 Gene3D G3DSA:1.25.40.10 354 516 3.4E-20 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_11615 7b4c4d5df1a88e7f093a07fe67a25cc3 523 SUPERFAMILY SSF48452 339 486 3.72E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_11615 7b4c4d5df1a88e7f093a07fe67a25cc3 523 Gene3D G3DSA:1.10.10.10 5 105 2.2E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_00470 1dd88a30c249d689fe812f8deea1db39 346 Gene3D G3DSA:3.30.420.470 136 342 1.6E-13 T 12-10-2018 M892_00470 1dd88a30c249d689fe812f8deea1db39 346 SUPERFAMILY SSF46689 15 131 1.19E-24 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_00470 1dd88a30c249d689fe812f8deea1db39 346 SUPERFAMILY SSF53098 223 306 8.04E-7 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_00470 1dd88a30c249d689fe812f8deea1db39 346 Pfam PF13358 DDE superfamily endonuclease 167 309 2.8E-35 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_00470 1dd88a30c249d689fe812f8deea1db39 346 Pfam PF13592 Winged helix-turn helix 98 154 2.3E-21 T 12-10-2018 IPR025959 Winged helix-turn helix domain M892_00470 1dd88a30c249d689fe812f8deea1db39 346 Pfam PF13551 Winged helix-turn helix 32 85 3.4E-7 T 12-10-2018 M892_00710 1dd88a30c249d689fe812f8deea1db39 346 Gene3D G3DSA:3.30.420.470 136 342 1.6E-13 T 12-10-2018 M892_00710 1dd88a30c249d689fe812f8deea1db39 346 SUPERFAMILY SSF46689 15 131 1.19E-24 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_00710 1dd88a30c249d689fe812f8deea1db39 346 SUPERFAMILY SSF53098 223 306 8.04E-7 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_00710 1dd88a30c249d689fe812f8deea1db39 346 Pfam PF13358 DDE superfamily endonuclease 167 309 2.8E-35 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_00710 1dd88a30c249d689fe812f8deea1db39 346 Pfam PF13592 Winged helix-turn helix 98 154 2.3E-21 T 12-10-2018 IPR025959 Winged helix-turn helix domain M892_00710 1dd88a30c249d689fe812f8deea1db39 346 Pfam PF13551 Winged helix-turn helix 32 85 3.4E-7 T 12-10-2018 M892_13170 3eac55740f44b372d4294fff01eb1220 358 Gene3D G3DSA:1.10.340.30 19 130 3.0E-88 T 12-10-2018 M892_13170 3eac55740f44b372d4294fff01eb1220 358 SUPERFAMILY SSF55811 218 354 2.43E-26 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 M892_13170 3eac55740f44b372d4294fff01eb1220 358 SMART SM00525 189 209 0.0012 T 12-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 M892_13170 3eac55740f44b372d4294fff01eb1220 358 ProSitePatterns PS01155 Endonuclease III family signature. 100 129 - T 12-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 M892_13170 3eac55740f44b372d4294fff01eb1220 358 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 166 8.9E-22 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 M892_13170 3eac55740f44b372d4294fff01eb1220 358 Pfam PF00633 Helix-hairpin-helix motif 97 125 4.4E-6 T 12-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 M892_13170 3eac55740f44b372d4294fff01eb1220 358 Gene3D G3DSA:3.90.79.10 223 356 5.7E-17 T 12-10-2018 M892_13170 3eac55740f44b372d4294fff01eb1220 358 Gene3D G3DSA:1.10.1670.10 7 209 3.0E-88 T 12-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 M892_13170 3eac55740f44b372d4294fff01eb1220 358 Pfam PF14815 NUDIX domain 242 352 1.4E-21 T 12-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 M892_13170 3eac55740f44b372d4294fff01eb1220 358 SMART SM00478 37 188 3.0E-47 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 M892_13170 3eac55740f44b372d4294fff01eb1220 358 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 4 269 4.7E-126 T 12-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 M892_13170 3eac55740f44b372d4294fff01eb1220 358 SUPERFAMILY SSF48150 3 223 1.26E-74 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 M892_13170 3eac55740f44b372d4294fff01eb1220 358 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 190 206 - T 12-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 M892_13170 3eac55740f44b372d4294fff01eb1220 358 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 190 206 5.6E-4 T 12-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 M892_12710 214a6560f9b5305f286766ae420ae543 544 Gene3D G3DSA:3.55.50.30 49 146 1.3E-10 T 12-10-2018 M892_12710 214a6560f9b5305f286766ae420ae543 544 SMART SM00965 93 141 1.9E-6 T 12-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 M892_12710 214a6560f9b5305f286766ae420ae543 544 TIGRFAM TIGR02519 pilus_MshL: pilus (MSHA type) biogenesis protein MshL 236 520 4.7E-89 T 12-10-2018 IPR013358 Pilus biogenesis, MshL M892_12710 214a6560f9b5305f286766ae420ae543 544 PRINTS PR00811 Bacterial general secretion pathway protein D signature 485 503 6.1E-17 T 12-10-2018 IPR001775 GspD/PilQ family M892_12710 214a6560f9b5305f286766ae420ae543 544 PRINTS PR00811 Bacterial general secretion pathway protein D signature 508 522 6.1E-17 T 12-10-2018 IPR001775 GspD/PilQ family M892_12710 214a6560f9b5305f286766ae420ae543 544 PRINTS PR00811 Bacterial general secretion pathway protein D signature 338 362 6.1E-17 T 12-10-2018 IPR001775 GspD/PilQ family M892_12710 214a6560f9b5305f286766ae420ae543 544 PRINTS PR00811 Bacterial general secretion pathway protein D signature 270 280 6.1E-17 T 12-10-2018 IPR001775 GspD/PilQ family M892_12710 214a6560f9b5305f286766ae420ae543 544 Pfam PF07655 Secretin N-terminal domain 145 241 3.2E-25 T 12-10-2018 IPR011514 Secretin, N-terminal GO:0009297|GO:0019867 M892_12710 214a6560f9b5305f286766ae420ae543 544 Pfam PF00263 Bacterial type II and III secretion system protein 343 520 1.5E-39 T 12-10-2018 IPR004846 Type II/III secretion system GO:0009306 M892_19225 fe1f63e636cd4f3bcb6214ff2c68fba0 206 Gene3D G3DSA:2.40.30.170 81 205 6.0E-26 T 12-10-2018 M892_19225 fe1f63e636cd4f3bcb6214ff2c68fba0 206 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 46 146 1.9E-11 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain M892_19225 fe1f63e636cd4f3bcb6214ff2c68fba0 206 SUPERFAMILY SSF111369 37 153 1.96E-8 T 12-10-2018 M892_01440 2399928be4eb77da2567b4bb5cfaf1d7 869 PRINTS PR00415 Aconitase family signature 273 286 4.9E-26 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 M892_01440 2399928be4eb77da2567b4bb5cfaf1d7 869 PRINTS PR00415 Aconitase family signature 144 157 4.9E-26 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 M892_01440 2399928be4eb77da2567b4bb5cfaf1d7 869 PRINTS PR00415 Aconitase family signature 211 226 4.9E-26 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 M892_01440 2399928be4eb77da2567b4bb5cfaf1d7 869 PRINTS PR00415 Aconitase family signature 470 483 4.9E-26 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 M892_01440 2399928be4eb77da2567b4bb5cfaf1d7 869 PRINTS PR00415 Aconitase family signature 408 419 4.9E-26 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 M892_01440 2399928be4eb77da2567b4bb5cfaf1d7 869 PRINTS PR00415 Aconitase family signature 197 210 4.9E-26 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 M892_01440 2399928be4eb77da2567b4bb5cfaf1d7 869 PRINTS PR00415 Aconitase family signature 366 380 4.9E-26 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 M892_01440 2399928be4eb77da2567b4bb5cfaf1d7 869 PRINTS PR00415 Aconitase family signature 168 176 4.9E-26 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 M892_01440 2399928be4eb77da2567b4bb5cfaf1d7 869 PRINTS PR00415 Aconitase family signature 287 300 4.9E-26 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 M892_01440 2399928be4eb77da2567b4bb5cfaf1d7 869 Pfam PF00330 Aconitase family (aconitate hydratase) 76 539 8.5E-146 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 M892_01440 2399928be4eb77da2567b4bb5cfaf1d7 869 TIGRFAM TIGR02333 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent 8 867 0.0 T 12-10-2018 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent GO:0019679 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 M892_01440 2399928be4eb77da2567b4bb5cfaf1d7 869 Gene3D G3DSA:3.30.499.10 367 567 7.4E-78 T 12-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 M892_01440 2399928be4eb77da2567b4bb5cfaf1d7 869 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 34 865 8.1E-292 T 12-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 M892_01440 2399928be4eb77da2567b4bb5cfaf1d7 869 Gene3D G3DSA:3.20.19.10 628 867 2.0E-83 T 12-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 M892_01440 2399928be4eb77da2567b4bb5cfaf1d7 869 Pfam PF00694 Aconitase C-terminal domain 666 797 2.7E-30 T 12-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 M892_01440 2399928be4eb77da2567b4bb5cfaf1d7 869 SUPERFAMILY SSF53732 15 599 1.1E-187 T 12-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 M892_01440 2399928be4eb77da2567b4bb5cfaf1d7 869 SUPERFAMILY SSF52016 604 866 1.55E-68 T 12-10-2018 M892_01440 2399928be4eb77da2567b4bb5cfaf1d7 869 Gene3D G3DSA:3.30.499.20 11 365 7.8E-132 T 12-10-2018 M892_01440 2399928be4eb77da2567b4bb5cfaf1d7 869 Gene3D G3DSA:1.10.1440.20 568 623 4.5E-9 T 12-10-2018 M892_14825 289cbc59e6d0064575805c1a4adcadb8 231 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 2 147 1.2E-47 T 12-10-2018 IPR023370 YaeB-like, N-terminal domain M892_14825 289cbc59e6d0064575805c1a4adcadb8 231 ProSitePatterns PS01318 TsaA-like domain signature. 85 96 - T 12-10-2018 IPR023368 Uncharacterised protein family UPF0066, conserved site M892_14825 289cbc59e6d0064575805c1a4adcadb8 231 Gene3D G3DSA:2.40.30.70 1 139 1.1E-42 T 12-10-2018 IPR036414 YaeB, N-terminal domain superfamily M892_14825 289cbc59e6d0064575805c1a4adcadb8 231 Gene3D G3DSA:3.30.2310.10 140 227 5.5E-21 T 12-10-2018 M892_14825 289cbc59e6d0064575805c1a4adcadb8 231 SUPERFAMILY SSF118196 1 226 5.1E-79 T 12-10-2018 IPR036413 YaeB-like superfamily M892_14825 289cbc59e6d0064575805c1a4adcadb8 231 Pfam PF01980 Uncharacterised protein family UPF0066 19 141 1.2E-39 T 12-10-2018 IPR023370 YaeB-like, N-terminal domain M892_27530 c7839e2590c6cf8d5b4bec3dbf11e734 239 Gene3D G3DSA:3.30.450.20 9 128 3.6E-16 T 12-10-2018 M892_27530 c7839e2590c6cf8d5b4bec3dbf11e734 239 Gene3D G3DSA:1.10.10.10 150 217 1.1E-13 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_27530 c7839e2590c6cf8d5b4bec3dbf11e734 239 SUPERFAMILY SSF55785 12 123 5.58E-14 T 12-10-2018 IPR035965 PAS domain superfamily M892_27530 c7839e2590c6cf8d5b4bec3dbf11e734 239 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 189 3.9E-6 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_27530 c7839e2590c6cf8d5b4bec3dbf11e734 239 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 189 201 3.9E-6 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_27530 c7839e2590c6cf8d5b4bec3dbf11e734 239 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 173 3.9E-6 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_27530 c7839e2590c6cf8d5b4bec3dbf11e734 239 Pfam PF00196 Bacterial regulatory proteins, luxR family 158 213 2.4E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_27530 c7839e2590c6cf8d5b4bec3dbf11e734 239 Pfam PF08448 PAS fold 13 124 9.9E-26 T 12-10-2018 IPR013656 PAS fold-4 M892_27530 c7839e2590c6cf8d5b4bec3dbf11e734 239 SUPERFAMILY SSF46894 150 218 2.82E-13 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M892_27530 c7839e2590c6cf8d5b4bec3dbf11e734 239 SMART SM00421 156 213 1.1E-6 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_24265 1da57171f0450d41e90ec955a1f00b98 102 Pfam PF06945 Protein of unknown function (DUF1289) 3 44 5.0E-15 T 12-10-2018 IPR010710 Protein of unknown function DUF1289 M892_24265 1da57171f0450d41e90ec955a1f00b98 102 Pfam PF14375 Cysteine-rich CWC 53 97 2.5E-7 T 12-10-2018 IPR032720 Cysteine-rich CWC M892_22000 75c039c73de671cad88c3d8629f5b055 1019 Gene3D G3DSA:1.20.1640.10 10 508 1.1E-264 T 12-10-2018 M892_22000 75c039c73de671cad88c3d8629f5b055 1019 SUPERFAMILY SSF82693 136 326 8.89E-22 T 12-10-2018 M892_22000 75c039c73de671cad88c3d8629f5b055 1019 SUPERFAMILY SSF82866 292 491 1.7E-37 T 12-10-2018 M892_22000 75c039c73de671cad88c3d8629f5b055 1019 SUPERFAMILY SSF82714 712 788 6.28E-10 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M892_22000 75c039c73de671cad88c3d8629f5b055 1019 SUPERFAMILY SSF82693 40 135 1.46E-19 T 12-10-2018 M892_22000 75c039c73de671cad88c3d8629f5b055 1019 Pfam PF00873 AcrB/AcrD/AcrF family 3 1011 5.5E-175 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_22000 75c039c73de671cad88c3d8629f5b055 1019 Gene3D G3DSA:3.30.70.1430 40 804 1.1E-264 T 12-10-2018 M892_22000 75c039c73de671cad88c3d8629f5b055 1019 SUPERFAMILY SSF82714 185 266 1.03E-12 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M892_22000 75c039c73de671cad88c3d8629f5b055 1019 Gene3D G3DSA:1.20.1640.10 509 1008 1.1E-264 T 12-10-2018 M892_22000 75c039c73de671cad88c3d8629f5b055 1019 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 4.7E-25 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_22000 75c039c73de671cad88c3d8629f5b055 1019 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 4.7E-25 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_22000 75c039c73de671cad88c3d8629f5b055 1019 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 4.7E-25 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_22000 75c039c73de671cad88c3d8629f5b055 1019 PRINTS PR00702 Acriflavin resistance protein family signature 332 355 4.7E-25 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_22000 75c039c73de671cad88c3d8629f5b055 1019 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 4.7E-25 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_22000 75c039c73de671cad88c3d8629f5b055 1019 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 4.7E-25 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_22000 75c039c73de671cad88c3d8629f5b055 1019 Gene3D G3DSA:3.30.2090.10 179 270 1.1E-264 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M892_22000 75c039c73de671cad88c3d8629f5b055 1019 Gene3D G3DSA:3.30.70.1320 135 328 1.1E-264 T 12-10-2018 M892_22000 75c039c73de671cad88c3d8629f5b055 1019 Gene3D G3DSA:3.30.70.1440 655 856 1.1E-264 T 12-10-2018 M892_22000 75c039c73de671cad88c3d8629f5b055 1019 Gene3D G3DSA:3.30.2090.10 706 796 1.1E-264 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M892_22000 75c039c73de671cad88c3d8629f5b055 1019 SUPERFAMILY SSF82866 793 1015 1.83E-44 T 12-10-2018 M892_22000 75c039c73de671cad88c3d8629f5b055 1019 Gene3D G3DSA:3.30.70.1430 556 654 1.1E-264 T 12-10-2018 M892_04465 6e694259869439768674f65a4891b8d6 163 Pfam PF07720 Tetratricopeptide repeat 40 71 3.0E-7 T 12-10-2018 IPR011716 Tetratricopeptide TPR-3 M892_04465 6e694259869439768674f65a4891b8d6 163 Pfam PF07720 Tetratricopeptide repeat 78 99 0.27 T 12-10-2018 IPR011716 Tetratricopeptide TPR-3 M892_04465 6e694259869439768674f65a4891b8d6 163 PIRSF PIRSF003165 1 163 9.5E-59 T 12-10-2018 IPR016379 Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup M892_04465 6e694259869439768674f65a4891b8d6 163 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 74 96 6.0E-34 T 12-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD M892_04465 6e694259869439768674f65a4891b8d6 163 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 106 128 6.0E-34 T 12-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD M892_04465 6e694259869439768674f65a4891b8d6 163 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 50 69 6.0E-34 T 12-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD M892_04465 6e694259869439768674f65a4891b8d6 163 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 25 48 6.0E-34 T 12-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD M892_04465 6e694259869439768674f65a4891b8d6 163 TIGRFAM TIGR02552 LcrH_SycD: type III secretion low calcium response chaperone LcrH/SycD 22 156 2.2E-43 T 12-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD M892_04465 6e694259869439768674f65a4891b8d6 163 Gene3D G3DSA:1.25.40.10 15 163 9.1E-53 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_04465 6e694259869439768674f65a4891b8d6 163 SUPERFAMILY SSF48452 28 150 5.69E-13 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_13555 361bfb92648164cce41d77f7eb71fc1f 395 Gene3D G3DSA:3.30.70.260 259 318 5.7E-5 T 12-10-2018 M892_13555 361bfb92648164cce41d77f7eb71fc1f 395 ProSitePatterns PS00324 Aspartokinase signature. 7 15 - T 12-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 M892_13555 361bfb92648164cce41d77f7eb71fc1f 395 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 65 379 2.2E-76 T 12-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 M892_13555 361bfb92648164cce41d77f7eb71fc1f 395 SUPERFAMILY SSF53633 6 242 9.29E-73 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily M892_13555 361bfb92648164cce41d77f7eb71fc1f 395 Gene3D G3DSA:3.40.1160.10 4 253 4.3E-84 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily M892_13555 361bfb92648164cce41d77f7eb71fc1f 395 Gene3D G3DSA:3.30.70.260 254 378 5.7E-5 T 12-10-2018 M892_13555 361bfb92648164cce41d77f7eb71fc1f 395 PIRSF PIRSF000726 3 63 1.4E-23 T 12-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 M892_13555 361bfb92648164cce41d77f7eb71fc1f 395 PIRSF PIRSF000726 59 386 2.0E-72 T 12-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 M892_13555 361bfb92648164cce41d77f7eb71fc1f 395 Pfam PF00696 Amino acid kinase family 5 231 8.3E-51 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 M892_14675 e4eaf5854d2035be8cc8140469729d3d 198 SUPERFAMILY SSF88697 3 189 6.71E-48 T 12-10-2018 IPR015947 PUA-like superfamily M892_14675 e4eaf5854d2035be8cc8140469729d3d 198 SMART SM00464 3 190 8.3E-4 T 12-10-2018 IPR003111 Lon, substrate-binding domain M892_14675 e4eaf5854d2035be8cc8140469729d3d 198 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 3 111 1.4E-14 T 12-10-2018 IPR003111 Lon, substrate-binding domain M892_14675 e4eaf5854d2035be8cc8140469729d3d 198 Gene3D G3DSA:2.30.130.40 1 111 2.6E-30 T 12-10-2018 M892_16640 9b079e387b4dda50b69c879a560e8341 556 SUPERFAMILY SSF50249 189 277 4.18E-27 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M892_16640 9b079e387b4dda50b69c879a560e8341 556 PIRSF PIRSF002111 1 534 8.6E-217 T 12-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 M892_16640 9b079e387b4dda50b69c879a560e8341 556 SUPERFAMILY SSF50249 255 364 1.07E-28 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M892_16640 9b079e387b4dda50b69c879a560e8341 556 Pfam PF00575 S1 RNA binding domain 362 434 2.0E-20 T 12-10-2018 IPR003029 S1 domain GO:0003676 M892_16640 9b079e387b4dda50b69c879a560e8341 556 Pfam PF00575 S1 RNA binding domain 275 347 2.6E-21 T 12-10-2018 IPR003029 S1 domain GO:0003676 M892_16640 9b079e387b4dda50b69c879a560e8341 556 Pfam PF00575 S1 RNA binding domain 18 86 1.5E-6 T 12-10-2018 IPR003029 S1 domain GO:0003676 M892_16640 9b079e387b4dda50b69c879a560e8341 556 Pfam PF00575 S1 RNA binding domain 189 260 1.7E-21 T 12-10-2018 IPR003029 S1 domain GO:0003676 M892_16640 9b079e387b4dda50b69c879a560e8341 556 Pfam PF00575 S1 RNA binding domain 449 520 7.2E-14 T 12-10-2018 IPR003029 S1 domain GO:0003676 M892_16640 9b079e387b4dda50b69c879a560e8341 556 Pfam PF00575 S1 RNA binding domain 103 171 5.9E-8 T 12-10-2018 IPR003029 S1 domain GO:0003676 M892_16640 9b079e387b4dda50b69c879a560e8341 556 Gene3D G3DSA:2.40.50.140 187 268 4.0E-28 T 12-10-2018 M892_16640 9b079e387b4dda50b69c879a560e8341 556 Gene3D G3DSA:2.40.50.140 269 357 1.5E-31 T 12-10-2018 M892_16640 9b079e387b4dda50b69c879a560e8341 556 Gene3D G3DSA:2.40.50.140 358 444 2.6E-23 T 12-10-2018 M892_16640 9b079e387b4dda50b69c879a560e8341 556 SUPERFAMILY SSF50249 4 112 1.89E-17 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M892_16640 9b079e387b4dda50b69c879a560e8341 556 SUPERFAMILY SSF50249 88 174 2.61E-13 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M892_16640 9b079e387b4dda50b69c879a560e8341 556 PRINTS PR00681 Ribosomal protein S1 signature 155 175 3.4E-97 T 12-10-2018 M892_16640 9b079e387b4dda50b69c879a560e8341 556 PRINTS PR00681 Ribosomal protein S1 signature 108 124 3.4E-97 T 12-10-2018 M892_16640 9b079e387b4dda50b69c879a560e8341 556 PRINTS PR00681 Ribosomal protein S1 signature 21 39 3.4E-97 T 12-10-2018 M892_16640 9b079e387b4dda50b69c879a560e8341 556 PRINTS PR00681 Ribosomal protein S1 signature 126 143 3.4E-97 T 12-10-2018 M892_16640 9b079e387b4dda50b69c879a560e8341 556 PRINTS PR00681 Ribosomal protein S1 signature 330 348 3.4E-97 T 12-10-2018 M892_16640 9b079e387b4dda50b69c879a560e8341 556 PRINTS PR00681 Ribosomal protein S1 signature 212 233 3.4E-97 T 12-10-2018 M892_16640 9b079e387b4dda50b69c879a560e8341 556 PRINTS PR00681 Ribosomal protein S1 signature 290 309 3.4E-97 T 12-10-2018 M892_16640 9b079e387b4dda50b69c879a560e8341 556 PRINTS PR00681 Ribosomal protein S1 signature 39 53 3.4E-97 T 12-10-2018 M892_16640 9b079e387b4dda50b69c879a560e8341 556 PRINTS PR00681 Ribosomal protein S1 signature 84 103 3.4E-97 T 12-10-2018 M892_16640 9b079e387b4dda50b69c879a560e8341 556 Gene3D G3DSA:2.40.50.140 6 98 1.0E-16 T 12-10-2018 M892_16640 9b079e387b4dda50b69c879a560e8341 556 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 3.6E-230 T 12-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 M892_16640 9b079e387b4dda50b69c879a560e8341 556 SUPERFAMILY SSF50249 347 438 1.12E-20 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M892_16640 9b079e387b4dda50b69c879a560e8341 556 SMART SM00316 190 260 6.0E-28 T 12-10-2018 IPR022967 RNA-binding domain, S1 M892_16640 9b079e387b4dda50b69c879a560e8341 556 SMART SM00316 275 347 1.8E-27 T 12-10-2018 IPR022967 RNA-binding domain, S1 M892_16640 9b079e387b4dda50b69c879a560e8341 556 SMART SM00316 103 171 1.2E-7 T 12-10-2018 IPR022967 RNA-binding domain, S1 M892_16640 9b079e387b4dda50b69c879a560e8341 556 SMART SM00316 362 434 6.5E-21 T 12-10-2018 IPR022967 RNA-binding domain, S1 M892_16640 9b079e387b4dda50b69c879a560e8341 556 SMART SM00316 449 520 1.9E-18 T 12-10-2018 IPR022967 RNA-binding domain, S1 M892_16640 9b079e387b4dda50b69c879a560e8341 556 SMART SM00316 19 87 0.0012 T 12-10-2018 IPR022967 RNA-binding domain, S1 M892_16640 9b079e387b4dda50b69c879a560e8341 556 SUPERFAMILY SSF50249 429 539 2.39E-22 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M892_16640 9b079e387b4dda50b69c879a560e8341 556 Gene3D G3DSA:2.40.50.140 445 528 1.5E-18 T 12-10-2018 M892_16640 9b079e387b4dda50b69c879a560e8341 556 Gene3D G3DSA:2.40.50.140 99 178 1.5E-5 T 12-10-2018 M892_13690 99a73aec9d3a5370a2ca8efb3a875904 82 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 12-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_13690 99a73aec9d3a5370a2ca8efb3a875904 82 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 2.2E-27 T 12-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_13690 99a73aec9d3a5370a2ca8efb3a875904 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 23.095 T 12-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_13690 99a73aec9d3a5370a2ca8efb3a875904 82 Pfam PF00886 Ribosomal protein S16 8 68 1.6E-23 T 12-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_13690 99a73aec9d3a5370a2ca8efb3a875904 82 Gene3D G3DSA:3.30.1320.10 1 82 2.7E-31 T 12-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_13690 99a73aec9d3a5370a2ca8efb3a875904 82 SUPERFAMILY SSF54565 1 76 6.93E-28 T 12-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_13635 000b4f14306f2c7bbefc5d6afcb077d1 593 SUPERFAMILY SSF51569 1 300 3.11E-90 T 12-10-2018 M892_13635 000b4f14306f2c7bbefc5d6afcb077d1 593 SUPERFAMILY SSF51230 515 592 7.85E-20 T 12-10-2018 IPR011053 Single hybrid motif M892_13635 000b4f14306f2c7bbefc5d6afcb077d1 593 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 549 566 - T 12-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 M892_13635 000b4f14306f2c7bbefc5d6afcb077d1 593 SUPERFAMILY SSF89000 297 462 9.02E-50 T 12-10-2018 M892_13635 000b4f14306f2c7bbefc5d6afcb077d1 593 Pfam PF00364 Biotin-requiring enzyme 527 591 3.6E-16 T 12-10-2018 IPR000089 Biotin/lipoyl attachment M892_13635 000b4f14306f2c7bbefc5d6afcb077d1 593 Gene3D G3DSA:3.20.20.70 1 464 3.3E-172 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M892_13635 000b4f14306f2c7bbefc5d6afcb077d1 593 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 7 587 2.1E-265 T 12-10-2018 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 M892_13635 000b4f14306f2c7bbefc5d6afcb077d1 593 Pfam PF02436 Conserved carboxylase domain 292 491 2.6E-57 T 12-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 M892_13635 000b4f14306f2c7bbefc5d6afcb077d1 593 Gene3D G3DSA:2.40.50.100 519 593 3.3E-22 T 12-10-2018 M892_13635 000b4f14306f2c7bbefc5d6afcb077d1 593 Pfam PF00682 HMGL-like 6 270 3.0E-60 T 12-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 M892_05295 8a135910b713c4cc20f04bf12be15868 756 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 598 612 4.8E-36 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 M892_05295 8a135910b713c4cc20f04bf12be15868 756 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 494 512 4.8E-36 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 M892_05295 8a135910b713c4cc20f04bf12be15868 756 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 536 554 4.8E-36 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 M892_05295 8a135910b713c4cc20f04bf12be15868 756 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 565 583 4.8E-36 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 M892_05295 8a135910b713c4cc20f04bf12be15868 756 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 656 736 1.6E-23 T 12-10-2018 IPR019489 Clp ATPase, C-terminal M892_05295 8a135910b713c4cc20f04bf12be15868 756 SMART SM00382 490 657 2.7E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_05295 8a135910b713c4cc20f04bf12be15868 756 SMART SM00382 209 354 4.6E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_05295 8a135910b713c4cc20f04bf12be15868 756 Gene3D G3DSA:1.10.8.60 656 755 9.9E-31 T 12-10-2018 M892_05295 8a135910b713c4cc20f04bf12be15868 756 Gene3D G3DSA:3.40.50.300 160 353 2.1E-62 T 12-10-2018 M892_05295 8a135910b713c4cc20f04bf12be15868 756 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 9.1E-13 T 12-10-2018 IPR004176 Clp, N-terminal M892_05295 8a135910b713c4cc20f04bf12be15868 756 Gene3D G3DSA:1.10.1780.10 1 143 1.5E-42 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 M892_05295 8a135910b713c4cc20f04bf12be15868 756 SUPERFAMILY SSF52540 440 747 5.22E-73 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_05295 8a135910b713c4cc20f04bf12be15868 756 SMART SM01086 656 745 2.2E-36 T 12-10-2018 IPR019489 Clp ATPase, C-terminal M892_05295 8a135910b713c4cc20f04bf12be15868 756 Gene3D G3DSA:3.40.50.300 442 655 2.6E-76 T 12-10-2018 M892_05295 8a135910b713c4cc20f04bf12be15868 756 SUPERFAMILY SSF81923 1 142 8.24E-59 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 M892_05295 8a135910b713c4cc20f04bf12be15868 756 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 521 539 - T 12-10-2018 IPR028299 ClpA/B, conserved site 2 M892_05295 8a135910b713c4cc20f04bf12be15868 756 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 305 317 - T 12-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 M892_05295 8a135910b713c4cc20f04bf12be15868 756 SUPERFAMILY SSF52540 171 429 1.28E-64 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_05295 8a135910b713c4cc20f04bf12be15868 756 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 214 327 9.3E-12 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 M892_05295 8a135910b713c4cc20f04bf12be15868 756 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 737 0.0 T 12-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 M892_05295 8a135910b713c4cc20f04bf12be15868 756 Gene3D G3DSA:1.10.8.60 354 441 2.1E-34 T 12-10-2018 M892_05295 8a135910b713c4cc20f04bf12be15868 756 Pfam PF07724 AAA domain (Cdc48 subfamily) 489 650 2.1E-47 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 M892_04020 7561a9d06fd4fc54af88c4e95c704a2d 436 Gene3D G3DSA:3.40.50.1980 231 346 1.9E-126 T 12-10-2018 M892_04020 7561a9d06fd4fc54af88c4e95c704a2d 436 Pfam PF00815 Histidinol dehydrogenase 26 423 3.9E-171 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 M892_04020 7561a9d06fd4fc54af88c4e95c704a2d 436 Gene3D G3DSA:3.40.50.1980 30 229 1.9E-126 T 12-10-2018 M892_04020 7561a9d06fd4fc54af88c4e95c704a2d 436 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 227 259 - T 12-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 M892_04020 7561a9d06fd4fc54af88c4e95c704a2d 436 PIRSF PIRSF000099 1 427 9.9E-171 T 12-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 M892_04020 7561a9d06fd4fc54af88c4e95c704a2d 436 SUPERFAMILY SSF53720 4 424 1.53E-94 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 M892_04020 7561a9d06fd4fc54af88c4e95c704a2d 436 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 423 1.0E-166 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 M892_04020 7561a9d06fd4fc54af88c4e95c704a2d 436 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 4 424 42.421 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 M892_04020 7561a9d06fd4fc54af88c4e95c704a2d 436 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 4.6E-103 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 M892_04020 7561a9d06fd4fc54af88c4e95c704a2d 436 PRINTS PR00083 Histidinol dehydrogenase signature 165 191 4.6E-103 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 M892_04020 7561a9d06fd4fc54af88c4e95c704a2d 436 PRINTS PR00083 Histidinol dehydrogenase signature 134 160 4.6E-103 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 M892_04020 7561a9d06fd4fc54af88c4e95c704a2d 436 PRINTS PR00083 Histidinol dehydrogenase signature 249 268 4.6E-103 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 M892_04020 7561a9d06fd4fc54af88c4e95c704a2d 436 PRINTS PR00083 Histidinol dehydrogenase signature 317 342 4.6E-103 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 M892_04020 7561a9d06fd4fc54af88c4e95c704a2d 436 PRINTS PR00083 Histidinol dehydrogenase signature 358 376 4.6E-103 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 M892_04020 7561a9d06fd4fc54af88c4e95c704a2d 436 PRINTS PR00083 Histidinol dehydrogenase signature 195 220 4.6E-103 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 M892_04020 7561a9d06fd4fc54af88c4e95c704a2d 436 PRINTS PR00083 Histidinol dehydrogenase signature 227 248 4.6E-103 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 M892_01475 40562bcd59b590a97c07d3810d1af560 703 TIGRFAM TIGR04456 LruC_dom: LruC domain 424 691 5.1E-65 T 12-10-2018 IPR031025 LruC domain M892_01475 40562bcd59b590a97c07d3810d1af560 703 Pfam PF16130 Domain of unknown function (DUF4842) 457 690 6.8E-52 T 12-10-2018 IPR032295 Domain of unknown function DUF4842 M892_19680 c9d8e5f609393ae142d94decf4358dba 179 SUPERFAMILY SSF158442 11 122 5.23E-22 T 12-10-2018 IPR023380 DsbB-like superfamily M892_19680 c9d8e5f609393ae142d94decf4358dba 179 Pfam PF02600 Disulfide bond formation protein DsbB 10 90 5.0E-14 T 12-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 M892_19680 c9d8e5f609393ae142d94decf4358dba 179 Gene3D G3DSA:1.20.1550.10 3 98 9.1E-13 T 12-10-2018 IPR023380 DsbB-like superfamily M892_25325 ad344910629ce7ec9b6119c5ad19ac54 343 Pfam PF16884 N-terminal domain of oxidoreductase 7 114 1.7E-42 T 12-10-2018 M892_25325 ad344910629ce7ec9b6119c5ad19ac54 343 Gene3D G3DSA:3.40.50.720 128 309 1.5E-131 T 12-10-2018 M892_25325 ad344910629ce7ec9b6119c5ad19ac54 343 SUPERFAMILY SSF51735 125 304 2.78E-46 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_25325 ad344910629ce7ec9b6119c5ad19ac54 343 Gene3D G3DSA:3.90.180.10 18 337 1.5E-131 T 12-10-2018 M892_25325 ad344910629ce7ec9b6119c5ad19ac54 343 SUPERFAMILY SSF50129 4 144 5.36E-44 T 12-10-2018 IPR011032 GroES-like superfamily M892_25325 ad344910629ce7ec9b6119c5ad19ac54 343 SMART SM00829 17 337 3.5E-6 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 M892_25325 ad344910629ce7ec9b6119c5ad19ac54 343 SUPERFAMILY SSF50129 289 338 6.59E-7 T 12-10-2018 IPR011032 GroES-like superfamily M892_25325 ad344910629ce7ec9b6119c5ad19ac54 343 Pfam PF00107 Zinc-binding dehydrogenase 159 285 2.3E-21 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 M892_05675 31ba444bfd32038e87b2c9922045aca3 255 SUPERFAMILY SSF52821 134 251 1.7E-30 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily M892_05675 31ba444bfd32038e87b2c9922045aca3 255 Pfam PF00581 Rhodanese-like domain 48 99 3.5E-9 T 12-10-2018 IPR001763 Rhodanese-like domain M892_05675 31ba444bfd32038e87b2c9922045aca3 255 Pfam PF00581 Rhodanese-like domain 140 243 3.7E-9 T 12-10-2018 IPR001763 Rhodanese-like domain M892_05675 31ba444bfd32038e87b2c9922045aca3 255 SUPERFAMILY SSF52821 9 105 3.27E-23 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily M892_05675 31ba444bfd32038e87b2c9922045aca3 255 Gene3D G3DSA:3.40.250.10 2 119 6.5E-29 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily M892_05675 31ba444bfd32038e87b2c9922045aca3 255 Gene3D G3DSA:3.40.250.10 123 249 1.6E-34 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily M892_05675 31ba444bfd32038e87b2c9922045aca3 255 SMART SM00450 4 103 1.6E-7 T 12-10-2018 IPR001763 Rhodanese-like domain M892_05675 31ba444bfd32038e87b2c9922045aca3 255 SMART SM00450 127 247 1.1E-15 T 12-10-2018 IPR001763 Rhodanese-like domain M892_19020 3fd8145d08b33c7fd8b696fb9c5812fc 380 SUPERFAMILY SSF55068 29 205 2.88E-70 T 12-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 M892_19020 3fd8145d08b33c7fd8b696fb9c5812fc 380 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 237 363 35.018 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 M892_19020 3fd8145d08b33c7fd8b696fb9c5812fc 380 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 238 371 1.7E-57 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 M892_19020 3fd8145d08b33c7fd8b696fb9c5812fc 380 Pfam PF01625 Peptide methionine sulfoxide reductase 43 193 2.5E-56 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 M892_19020 3fd8145d08b33c7fd8b696fb9c5812fc 380 Gene3D G3DSA:3.30.1060.10 26 210 8.1E-62 T 12-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 M892_19020 3fd8145d08b33c7fd8b696fb9c5812fc 380 SUPERFAMILY SSF51316 239 379 4.13E-58 T 12-10-2018 IPR011057 Mss4-like superfamily M892_19020 3fd8145d08b33c7fd8b696fb9c5812fc 380 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 42 192 4.3E-50 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 M892_19020 3fd8145d08b33c7fd8b696fb9c5812fc 380 Gene3D G3DSA:2.170.150.20 233 380 2.6E-55 T 12-10-2018 M892_19020 3fd8145d08b33c7fd8b696fb9c5812fc 380 Pfam PF01641 SelR domain 243 362 8.2E-46 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 M892_19020 3fd8145d08b33c7fd8b696fb9c5812fc 380 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 40 199 35.621 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 M892_10035 3d4bbd85f264ec55fcc2523b27286d87 265 Pfam PF13531 Bacterial extracellular solute-binding protein 38 263 4.8E-25 T 12-10-2018 M892_10035 3d4bbd85f264ec55fcc2523b27286d87 265 SUPERFAMILY SSF53850 35 263 1.86E-31 T 12-10-2018 M892_10035 3d4bbd85f264ec55fcc2523b27286d87 265 Gene3D G3DSA:3.40.190.10 39 263 6.9E-79 T 12-10-2018 M892_10035 3d4bbd85f264ec55fcc2523b27286d87 265 Gene3D G3DSA:3.40.190.10 116 229 6.9E-79 T 12-10-2018 M892_14765 f14c95407c3eb0e0d3a907938443bc21 403 Pfam PF00990 Diguanylate cyclase, GGDEF domain 255 400 1.7E-30 T 12-10-2018 IPR000160 GGDEF domain M892_14765 f14c95407c3eb0e0d3a907938443bc21 403 Gene3D G3DSA:3.40.50.2300 1 118 1.2E-16 T 12-10-2018 M892_14765 f14c95407c3eb0e0d3a907938443bc21 403 SUPERFAMILY SSF55073 260 402 1.1E-33 T 12-10-2018 IPR029787 Nucleotide cyclase M892_14765 f14c95407c3eb0e0d3a907938443bc21 403 SMART SM00267 244 403 1.0E-34 T 12-10-2018 IPR000160 GGDEF domain M892_14765 f14c95407c3eb0e0d3a907938443bc21 403 Gene3D G3DSA:3.30.70.270 247 403 1.3E-39 T 12-10-2018 M892_14765 f14c95407c3eb0e0d3a907938443bc21 403 SMART SM00448 124 238 6.0E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_14765 f14c95407c3eb0e0d3a907938443bc21 403 SMART SM00448 3 115 4.5E-10 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_14765 f14c95407c3eb0e0d3a907938443bc21 403 Gene3D G3DSA:3.40.50.2300 119 246 8.9E-30 T 12-10-2018 M892_14765 f14c95407c3eb0e0d3a907938443bc21 403 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 253 401 1.1E-37 T 12-10-2018 IPR000160 GGDEF domain M892_14765 f14c95407c3eb0e0d3a907938443bc21 403 SUPERFAMILY SSF52172 4 120 1.57E-18 T 12-10-2018 IPR011006 CheY-like superfamily M892_14765 f14c95407c3eb0e0d3a907938443bc21 403 SUPERFAMILY SSF52172 124 259 2.7E-32 T 12-10-2018 IPR011006 CheY-like superfamily M892_14765 f14c95407c3eb0e0d3a907938443bc21 403 Pfam PF00072 Response regulator receiver domain 5 104 5.3E-11 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_14765 f14c95407c3eb0e0d3a907938443bc21 403 Pfam PF00072 Response regulator receiver domain 127 235 3.1E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_26950 674ab61bfcdc12737c7cb30d65489331 1328 SUPERFAMILY SSF51445 407 975 3.43E-124 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily M892_26950 674ab61bfcdc12737c7cb30d65489331 1328 SMART SM00642 552 915 4.5E-4 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 M892_26950 674ab61bfcdc12737c7cb30d65489331 1328 SUPERFAMILY SSF81296 171 296 7.14E-31 T 12-10-2018 IPR014756 Immunoglobulin E-set M892_26950 674ab61bfcdc12737c7cb30d65489331 1328 Gene3D G3DSA:2.60.40.1180 1010 1091 1.0E-26 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta M892_26950 674ab61bfcdc12737c7cb30d65489331 1328 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 311 395 7.8E-15 T 12-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 M892_26950 674ab61bfcdc12737c7cb30d65489331 1328 Gene3D G3DSA:2.60.40.1110 34 170 1.6E-29 T 12-10-2018 M892_26950 674ab61bfcdc12737c7cb30d65489331 1328 SUPERFAMILY SSF81296 1103 1153 9.24E-6 T 12-10-2018 IPR014756 Immunoglobulin E-set M892_26950 674ab61bfcdc12737c7cb30d65489331 1328 Gene3D G3DSA:2.60.40.10 303 409 7.6E-30 T 12-10-2018 IPR013783 Immunoglobulin-like fold M892_26950 674ab61bfcdc12737c7cb30d65489331 1328 Gene3D G3DSA:2.60.40.1130 180 296 3.2E-31 T 12-10-2018 M892_26950 674ab61bfcdc12737c7cb30d65489331 1328 Pfam PF03714 Bacterial pullanase-associated domain 51 171 4.6E-17 T 12-10-2018 IPR005323 Pullulanase, carbohydrate-binding module 41 GO:0005975|GO:0030246 M892_26950 674ab61bfcdc12737c7cb30d65489331 1328 Pfam PF11852 Domain of unknown function (DUF3372) 917 1079 2.3E-61 T 12-10-2018 IPR024561 Alpha-1,6-glucosidases, pullulanase-type, C-terminal M892_26950 674ab61bfcdc12737c7cb30d65489331 1328 Gene3D G3DSA:2.60.40.10 1092 1166 9.3E-7 T 12-10-2018 IPR013783 Immunoglobulin-like fold M892_26950 674ab61bfcdc12737c7cb30d65489331 1328 SUPERFAMILY SSF49452 15 171 3.27E-29 T 12-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 M892_26950 674ab61bfcdc12737c7cb30d65489331 1328 Gene3D G3DSA:3.20.20.80 410 1009 6.2E-214 T 12-10-2018 M892_26950 674ab61bfcdc12737c7cb30d65489331 1328 SUPERFAMILY SSF51011 978 1092 5.9E-39 T 12-10-2018 M892_26950 674ab61bfcdc12737c7cb30d65489331 1328 SUPERFAMILY SSF81296 309 413 9.4E-22 T 12-10-2018 IPR014756 Immunoglobulin E-set M892_26950 674ab61bfcdc12737c7cb30d65489331 1328 TIGRFAM TIGR02103 pullul_strch: alpha-1,6-glucosidases, pullulanase-type 180 1080 0.0 T 12-10-2018 IPR011839 Alpha-1,6-glucosidases, pullulanase-type GO:0005975|GO:0051060 M892_01010 5797bf6199f4d27398f244f93f265a63 475 Pfam PF13520 Amino acid permease 11 448 1.6E-58 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 M892_01010 5797bf6199f4d27398f244f93f265a63 475 PIRSF PIRSF006060 8 472 1.2E-56 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 M892_01010 5797bf6199f4d27398f244f93f265a63 475 Gene3D G3DSA:1.20.1740.10 8 470 2.2E-43 T 12-10-2018 M892_21420 574dd2711dd3a86bb990f8a56636f295 512 Gene3D G3DSA:1.20.150.20 383 512 2.1E-46 T 12-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_21420 574dd2711dd3a86bb990f8a56636f295 512 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M892_21420 574dd2711dd3a86bb990f8a56636f295 512 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 92 1.3E-13 T 12-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M892_21420 574dd2711dd3a86bb990f8a56636f295 512 SUPERFAMILY SSF47917 383 509 1.54E-43 T 12-10-2018 M892_21420 574dd2711dd3a86bb990f8a56636f295 512 SUPERFAMILY SSF52540 96 381 5.88E-94 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_21420 574dd2711dd3a86bb990f8a56636f295 512 Gene3D G3DSA:3.40.50.300 94 382 3.9E-130 T 12-10-2018 M892_21420 574dd2711dd3a86bb990f8a56636f295 512 SUPERFAMILY SSF50615 10 94 6.47E-25 T 12-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M892_21420 574dd2711dd3a86bb990f8a56636f295 512 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 1.8E-72 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M892_21420 574dd2711dd3a86bb990f8a56636f295 512 Gene3D G3DSA:2.40.30.20 1 93 1.1E-28 T 12-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M892_21420 574dd2711dd3a86bb990f8a56636f295 512 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 1.1E-44 T 12-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_21420 574dd2711dd3a86bb990f8a56636f295 512 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 49.876 T 12-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_21420 574dd2711dd3a86bb990f8a56636f295 512 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 509 1.7E-252 T 12-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_13540 cf4d653c68e49b25ec4967f2cb3c62cf 347 SMART SM00382 57 228 4.8E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_13540 cf4d653c68e49b25ec4967f2cb3c62cf 347 PRINTS PR00142 RecA protein signature 297 314 9.5E-85 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 M892_13540 cf4d653c68e49b25ec4967f2cb3c62cf 347 PRINTS PR00142 RecA protein signature 93 122 9.5E-85 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 M892_13540 cf4d653c68e49b25ec4967f2cb3c62cf 347 PRINTS PR00142 RecA protein signature 243 272 9.5E-85 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 M892_13540 cf4d653c68e49b25ec4967f2cb3c62cf 347 PRINTS PR00142 RecA protein signature 210 238 9.5E-85 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 M892_13540 cf4d653c68e49b25ec4967f2cb3c62cf 347 PRINTS PR00142 RecA protein signature 127 156 9.5E-85 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 M892_13540 cf4d653c68e49b25ec4967f2cb3c62cf 347 PRINTS PR00142 RecA protein signature 165 194 9.5E-85 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 M892_13540 cf4d653c68e49b25ec4967f2cb3c62cf 347 Hamap MF_00268 Protein RecA [recA]. 5 329 50.498 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 M892_13540 cf4d653c68e49b25ec4967f2cb3c62cf 347 Pfam PF00154 recA bacterial DNA recombination protein 7 267 1.0E-142 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 M892_13540 cf4d653c68e49b25ec4967f2cb3c62cf 347 ProSitePatterns PS00321 recA signature. 213 221 - T 12-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 M892_13540 cf4d653c68e49b25ec4967f2cb3c62cf 347 SUPERFAMILY SSF54752 269 325 1.31E-20 T 12-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal M892_13540 cf4d653c68e49b25ec4967f2cb3c62cf 347 Gene3D G3DSA:3.40.50.300 26 267 1.4E-82 T 12-10-2018 M892_13540 cf4d653c68e49b25ec4967f2cb3c62cf 347 Gene3D G3DSA:3.30.250.10 268 326 3.4E-25 T 12-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal M892_13540 cf4d653c68e49b25ec4967f2cb3c62cf 347 SUPERFAMILY SSF52540 4 266 4.02E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_13540 cf4d653c68e49b25ec4967f2cb3c62cf 347 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 324 1.7E-169 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 M892_14225 47ccca79d83381fa43a4f7190e914f18 239 Gene3D G3DSA:3.40.50.1580 1 238 4.5E-76 T 12-10-2018 M892_14225 47ccca79d83381fa43a4f7190e914f18 239 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 12-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 M892_14225 47ccca79d83381fa43a4f7190e914f18 239 Pfam PF01048 Phosphorylase superfamily 15 217 8.2E-41 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 M892_14225 47ccca79d83381fa43a4f7190e914f18 239 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 234 1.1E-118 T 12-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 M892_14225 47ccca79d83381fa43a4f7190e914f18 239 SUPERFAMILY SSF53167 3 234 2.62E-92 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 M892_14225 47ccca79d83381fa43a4f7190e914f18 239 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 51.523 T 12-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 M892_19210 b1f5b059bd36db6d9193562acb68d1b1 222 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 24 216 9.1E-52 T 12-10-2018 IPR018635 Uncharacterised protein family UPF0319 M892_19210 b1f5b059bd36db6d9193562acb68d1b1 222 Hamap MF_00789 UPF0319 protein YccT [yccT]. 5 221 29.211 T 12-10-2018 IPR018635 Uncharacterised protein family UPF0319 M892_00440 4a575b8c190ac1615ecc0d4b5149f372 267 SMART SM00052 2 247 8.8E-11 T 12-10-2018 IPR001633 EAL domain M892_00440 4a575b8c190ac1615ecc0d4b5149f372 267 Pfam PF00563 EAL domain 13 242 7.3E-35 T 12-10-2018 IPR001633 EAL domain M892_00440 4a575b8c190ac1615ecc0d4b5149f372 267 SUPERFAMILY SSF141868 15 254 1.96E-41 T 12-10-2018 IPR035919 EAL domain superfamily M892_00440 4a575b8c190ac1615ecc0d4b5149f372 267 Gene3D G3DSA:3.20.20.450 11 250 8.4E-41 T 12-10-2018 IPR035919 EAL domain superfamily M892_15280 374d419eb1dbf2ab4f75378f82d74599 686 Pfam PF02120 Flagellar hook-length control protein FliK 556 639 2.9E-25 T 12-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal M892_15280 374d419eb1dbf2ab4f75378f82d74599 686 Gene3D G3DSA:3.30.750.140 535 649 9.9E-32 T 12-10-2018 IPR038610 FliK-like, C-terminal domain superfamily M892_15280 374d419eb1dbf2ab4f75378f82d74599 686 PRINTS PR01007 Flagellar hook-length control protein signature 326 339 4.6E-7 T 12-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 M892_15280 374d419eb1dbf2ab4f75378f82d74599 686 PRINTS PR01007 Flagellar hook-length control protein signature 571 589 4.6E-7 T 12-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 M892_15280 374d419eb1dbf2ab4f75378f82d74599 686 PRINTS PR01007 Flagellar hook-length control protein signature 604 627 4.6E-7 T 12-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 M892_10545 36a41170ab16948b9f21eb2d787ca620 248 SUPERFAMILY SSF53850 1 246 1.58E-56 T 12-10-2018 M892_10545 36a41170ab16948b9f21eb2d787ca620 248 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 25 243 3.4E-54 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M892_10545 36a41170ab16948b9f21eb2d787ca620 248 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 46 59 - T 12-10-2018 IPR018313 Solute-binding protein family 3, conserved site M892_10545 36a41170ab16948b9f21eb2d787ca620 248 SMART SM00062 24 245 5.1E-73 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M892_10545 36a41170ab16948b9f21eb2d787ca620 248 SMART SM00079 24 244 0.0081 T 12-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 M892_10545 36a41170ab16948b9f21eb2d787ca620 248 Gene3D G3DSA:3.40.190.10 91 204 2.3E-28 T 12-10-2018 M892_13310 06a04d6ac44356284d20b8ec59a21150 288 SUPERFAMILY SSF82689 187 284 7.32E-35 T 12-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 M892_13310 06a04d6ac44356284d20b8ec59a21150 288 SUPERFAMILY SSF50182 120 185 4.58E-18 T 12-10-2018 IPR010920 LSM domain superfamily M892_13310 06a04d6ac44356284d20b8ec59a21150 288 Gene3D G3DSA:2.30.30.60 135 184 5.2E-23 T 12-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily M892_13310 06a04d6ac44356284d20b8ec59a21150 288 SUPERFAMILY SSF82861 33 118 1.28E-17 T 12-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 M892_13310 06a04d6ac44356284d20b8ec59a21150 288 Gene3D G3DSA:3.30.70.100 185 279 1.7E-28 T 12-10-2018 M892_13310 06a04d6ac44356284d20b8ec59a21150 288 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 149 183 - T 12-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 M892_13310 06a04d6ac44356284d20b8ec59a21150 288 Pfam PF00924 Mechanosensitive ion channel 77 274 2.2E-58 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 M892_13310 06a04d6ac44356284d20b8ec59a21150 288 Pfam PF05552 Conserved TM helix 21 69 1.9E-13 T 12-10-2018 IPR008910 Conserved TM helix M892_06750 cd3896d39bb43435165dc90c1053906b 127 PIRSF PIRSF005610 1 121 1.0E-19 T 12-10-2018 IPR007360 Invasion gene expression up-regulator, SirB M892_06750 cd3896d39bb43435165dc90c1053906b 127 Pfam PF04247 Invasion gene expression up-regulator, SirB 2 123 4.0E-40 T 12-10-2018 IPR007360 Invasion gene expression up-regulator, SirB M892_00965 4fd763ec77d60fcf808011814796d1af 253 Gene3D G3DSA:1.25.40.10 49 253 3.3E-36 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_00965 4fd763ec77d60fcf808011814796d1af 253 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 23 250 4.6E-79 T 12-10-2018 IPR013360 Pilus biogenesis/stability type IV, PilW M892_00965 4fd763ec77d60fcf808011814796d1af 253 SMART SM00028 155 188 1.3 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_00965 4fd763ec77d60fcf808011814796d1af 253 SMART SM00028 51 84 75.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_00965 4fd763ec77d60fcf808011814796d1af 253 SMART SM00028 119 152 27.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_00965 4fd763ec77d60fcf808011814796d1af 253 SMART SM00028 85 118 0.6 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_00965 4fd763ec77d60fcf808011814796d1af 253 SUPERFAMILY SSF48452 51 211 5.69E-21 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_00965 4fd763ec77d60fcf808011814796d1af 253 Pfam PF13431 Tetratricopeptide repeat 107 138 4.0E-7 T 12-10-2018 M892_08830 162c9842bb4b0c1494cd7aad01ed48dd 269 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 10 263 1.1E-88 T 12-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 M892_08830 162c9842bb4b0c1494cd7aad01ed48dd 269 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 41 68 - T 12-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 M892_08830 162c9842bb4b0c1494cd7aad01ed48dd 269 Pfam PF00398 Ribosomal RNA adenine dimethylase 9 264 7.5E-77 T 12-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm M892_08830 162c9842bb4b0c1494cd7aad01ed48dd 269 SMART SM00650 25 197 3.3E-89 T 12-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 M892_08830 162c9842bb4b0c1494cd7aad01ed48dd 269 Gene3D G3DSA:1.10.8.100 200 267 2.5E-25 T 12-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 M892_08830 162c9842bb4b0c1494cd7aad01ed48dd 269 Gene3D G3DSA:3.40.50.150 1 198 2.2E-65 T 12-10-2018 M892_08830 162c9842bb4b0c1494cd7aad01ed48dd 269 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 9 264 55.549 T 12-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 M892_08830 162c9842bb4b0c1494cd7aad01ed48dd 269 SUPERFAMILY SSF53335 8 267 1.49E-79 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M892_06725 c180515c999a58609c13b1a165b9bc26 384 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 71 223 9.3E-48 T 12-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 M892_06725 c180515c999a58609c13b1a165b9bc26 384 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 102 116 - T 12-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 M892_06725 c180515c999a58609c13b1a165b9bc26 384 SMART SM00363 7 65 1.7E-10 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_06725 c180515c999a58609c13b1a165b9bc26 384 Pfam PF00849 RNA pseudouridylate synthase 67 193 4.9E-14 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 M892_06725 c180515c999a58609c13b1a165b9bc26 384 Gene3D G3DSA:3.30.70.580 68 227 1.4E-53 T 12-10-2018 M892_06725 c180515c999a58609c13b1a165b9bc26 384 Gene3D G3DSA:3.30.70.1560 132 205 1.4E-53 T 12-10-2018 M892_06725 c180515c999a58609c13b1a165b9bc26 384 Pfam PF01479 S4 domain 8 52 1.7E-10 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_06725 c180515c999a58609c13b1a165b9bc26 384 SUPERFAMILY SSF55174 7 97 2.19E-14 T 12-10-2018 M892_06725 c180515c999a58609c13b1a165b9bc26 384 Gene3D G3DSA:3.10.290.10 1 61 7.7E-22 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 M892_06725 c180515c999a58609c13b1a165b9bc26 384 SUPERFAMILY SSF55120 66 227 6.04E-38 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 M892_16760 1702480ef2eb4e5319da05f768ea5436 427 Pfam PF02687 FtsX-like permease family 322 420 2.2E-11 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 M892_16760 1702480ef2eb4e5319da05f768ea5436 427 Pfam PF12704 MacB-like periplasmic core domain 20 255 7.0E-26 T 12-10-2018 IPR025857 MacB-like periplasmic core domain M892_06000 1ddb43c8feaf04154caf31d5d45a4802 41 TIGRFAM TIGR03382 GC_trans_RRR: Myxococcales GC_trans_RRR domain 17 40 8.9E-4 T 12-10-2018 IPR017756 Transmembrane Gly-Cys-Arg, conserved site M892_06000 1ddb43c8feaf04154caf31d5d45a4802 41 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 20 40 9.9E-7 T 12-10-2018 IPR020008 GlyGly-CTERM domain M892_01045 d3e678dedcc6b61669258e24af969635 490 PIRSF PIRSF006615 1 490 1.9E-195 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 M892_01045 d3e678dedcc6b61669258e24af969635 490 SUPERFAMILY SSF55486 1 490 2.2E-114 T 12-10-2018 M892_01045 d3e678dedcc6b61669258e24af969635 490 Gene3D G3DSA:1.10.1370.30 1 490 1.2E-194 T 12-10-2018 M892_01045 d3e678dedcc6b61669258e24af969635 490 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 8 489 1.6E-94 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 M892_01045 d3e678dedcc6b61669258e24af969635 490 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 397 418 6.8E-43 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 M892_01045 d3e678dedcc6b61669258e24af969635 490 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 288 304 6.8E-43 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 M892_01045 d3e678dedcc6b61669258e24af969635 490 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 241 260 6.8E-43 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 M892_01045 d3e678dedcc6b61669258e24af969635 490 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 261 280 6.8E-43 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 M892_01045 d3e678dedcc6b61669258e24af969635 490 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 441 459 6.8E-43 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 M892_01045 d3e678dedcc6b61669258e24af969635 490 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 327 346 6.8E-43 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 M892_01045 d3e678dedcc6b61669258e24af969635 490 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 145 165 6.8E-43 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 M892_25900 f43606564bbc5a5e62380521cc7cfd56 298 Gene3D G3DSA:3.30.420.470 136 293 3.1E-6 T 12-10-2018 M892_25900 f43606564bbc5a5e62380521cc7cfd56 298 Pfam PF13358 DDE superfamily endonuclease 169 290 2.3E-28 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_25900 f43606564bbc5a5e62380521cc7cfd56 298 SUPERFAMILY SSF53098 221 290 2.28E-5 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_25900 f43606564bbc5a5e62380521cc7cfd56 298 SUPERFAMILY SSF46689 16 131 1.49E-25 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_25900 f43606564bbc5a5e62380521cc7cfd56 298 Pfam PF13592 Winged helix-turn helix 98 155 5.7E-20 T 12-10-2018 IPR025959 Winged helix-turn helix domain M892_25900 f43606564bbc5a5e62380521cc7cfd56 298 Pfam PF13551 Winged helix-turn helix 32 87 1.8E-8 T 12-10-2018 M892_10595 2ef2d6b725eb8ae0e288e2d35ea6584c 293 SMART SM00470 40 130 7.5E-36 T 12-10-2018 IPR003115 ParB/Sulfiredoxin M892_10595 2ef2d6b725eb8ae0e288e2d35ea6584c 293 Gene3D G3DSA:3.90.1530.30 53 116 1.6E-26 T 12-10-2018 M892_10595 2ef2d6b725eb8ae0e288e2d35ea6584c 293 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 39 214 1.1E-56 T 12-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 M892_10595 2ef2d6b725eb8ae0e288e2d35ea6584c 293 Pfam PF02195 ParB-like nuclease domain 43 130 5.9E-29 T 12-10-2018 IPR003115 ParB/Sulfiredoxin M892_10595 2ef2d6b725eb8ae0e288e2d35ea6584c 293 Gene3D G3DSA:1.10.10.2830 117 230 2.4E-34 T 12-10-2018 M892_10595 2ef2d6b725eb8ae0e288e2d35ea6584c 293 SUPERFAMILY SSF110849 44 174 1.57E-32 T 12-10-2018 IPR036086 ParB/Sulfiredoxin superfamily M892_11535 973e8b02118a69d64177b0df9e7257ff 1400 SUPERFAMILY SSF64484 16 1363 0.0 T 12-10-2018 M892_11535 973e8b02118a69d64177b0df9e7257ff 1400 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 10 1376 18.955 T 12-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M892_11535 973e8b02118a69d64177b0df9e7257ff 1400 Gene3D G3DSA:1.10.150.390 1315 1376 1.2E-28 T 12-10-2018 M892_11535 973e8b02118a69d64177b0df9e7257ff 1400 Gene3D G3DSA:1.10.274.100 490 640 1.7E-39 T 12-10-2018 M892_11535 973e8b02118a69d64177b0df9e7257ff 1400 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1366 0.0 T 12-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M892_11535 973e8b02118a69d64177b0df9e7257ff 1400 Gene3D G3DSA:2.40.50.100 948 1021 1.6E-23 T 12-10-2018 M892_11535 973e8b02118a69d64177b0df9e7257ff 1400 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 4.4E-19 T 12-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M892_11535 973e8b02118a69d64177b0df9e7257ff 1400 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 395 4.5E-8 T 12-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M892_11535 973e8b02118a69d64177b0df9e7257ff 1400 Pfam PF00623 RNA polymerase Rpb1, domain 2 389 485 1.9E-27 T 12-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M892_11535 973e8b02118a69d64177b0df9e7257ff 1400 Gene3D G3DSA:1.10.1790.20 1135 1313 7.5E-64 T 12-10-2018 M892_11535 973e8b02118a69d64177b0df9e7257ff 1400 Gene3D G3DSA:1.10.132.30 641 790 5.8E-66 T 12-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M892_11535 973e8b02118a69d64177b0df9e7257ff 1400 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 2.1E-27 T 12-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M892_11535 973e8b02118a69d64177b0df9e7257ff 1400 Gene3D G3DSA:2.40.50.100 1151 1214 7.5E-64 T 12-10-2018 M892_11535 973e8b02118a69d64177b0df9e7257ff 1400 SMART SM00663 235 514 1.1E-184 T 12-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M892_11535 973e8b02118a69d64177b0df9e7257ff 1400 Gene3D G3DSA:1.10.40.90 374 416 3.1E-22 T 12-10-2018 M892_11535 973e8b02118a69d64177b0df9e7257ff 1400 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 9.7E-88 T 12-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M892_11535 973e8b02118a69d64177b0df9e7257ff 1400 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1314 1.7E-77 T 12-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M892_11535 973e8b02118a69d64177b0df9e7257ff 1400 Gene3D G3DSA:2.40.50.100 1022 1126 9.2E-29 T 12-10-2018 M892_04050 dcd12f0adca6e088830b8df235144a75 374 Gene3D G3DSA:3.40.50.620 1 214 8.7E-95 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M892_04050 dcd12f0adca6e088830b8df235144a75 374 Gene3D G3DSA:2.30.30.280 216 286 6.4E-25 T 12-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 M892_04050 dcd12f0adca6e088830b8df235144a75 374 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 7 366 39.365 T 12-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 M892_04050 dcd12f0adca6e088830b8df235144a75 374 Pfam PF03054 tRNA methyl transferase 7 365 1.4E-141 T 12-10-2018 M892_04050 dcd12f0adca6e088830b8df235144a75 374 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 7 365 1.4E-151 T 12-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 M892_04050 dcd12f0adca6e088830b8df235144a75 374 Gene3D G3DSA:2.40.30.10 287 372 1.0E-32 T 12-10-2018 M892_04050 dcd12f0adca6e088830b8df235144a75 374 SUPERFAMILY SSF52402 5 247 7.72E-56 T 12-10-2018 M892_10640 278284f081677a0ef80eafb666542c11 140 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 4 132 20.746 T 12-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_10640 278284f081677a0ef80eafb666542c11 140 Gene3D G3DSA:2.60.15.10 4 91 2.5E-31 T 12-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_10640 278284f081677a0ef80eafb666542c11 140 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 89 134 6.6E-12 T 12-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain M892_10640 278284f081677a0ef80eafb666542c11 140 SUPERFAMILY SSF51344 5 87 3.79E-24 T 12-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_10640 278284f081677a0ef80eafb666542c11 140 Gene3D G3DSA:1.20.5.440 92 135 2.5E-19 T 12-10-2018 M892_10640 278284f081677a0ef80eafb666542c11 140 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 5 134 8.6E-44 T 12-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_10640 278284f081677a0ef80eafb666542c11 140 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 11 91 7.0E-41 T 12-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_10640 278284f081677a0ef80eafb666542c11 140 SUPERFAMILY SSF46604 89 138 1.49E-14 T 12-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_10640 278284f081677a0ef80eafb666542c11 140 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 85 8.3E-29 T 12-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_06930 537a632139e7f5e763984b2ce665e7cb 561 SMART SM00642 18 419 2.1E-161 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 M892_06930 537a632139e7f5e763984b2ce665e7cb 561 SUPERFAMILY SSF51011 480 559 7.52E-17 T 12-10-2018 M892_06930 537a632139e7f5e763984b2ce665e7cb 561 Gene3D G3DSA:3.20.20.80 176 480 1.5E-115 T 12-10-2018 M892_06930 537a632139e7f5e763984b2ce665e7cb 561 Gene3D G3DSA:3.90.400.10 114 175 7.4E-30 T 12-10-2018 M892_06930 537a632139e7f5e763984b2ce665e7cb 561 Pfam PF00128 Alpha amylase, catalytic domain 33 376 5.1E-128 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 M892_06930 537a632139e7f5e763984b2ce665e7cb 561 SUPERFAMILY SSF51445 9 477 2.68E-162 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily M892_06930 537a632139e7f5e763984b2ce665e7cb 561 Gene3D G3DSA:2.60.40.1180 481 559 1.1E-18 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta M892_06930 537a632139e7f5e763984b2ce665e7cb 561 Gene3D G3DSA:3.20.20.80 1 113 9.5E-51 T 12-10-2018 M892_06930 537a632139e7f5e763984b2ce665e7cb 561 Pfam PF16657 Maltogenic Amylase, C-terminal domain 480 555 2.6E-8 T 12-10-2018 IPR032091 Maltogenic Amylase, C-terminal M892_06930 537a632139e7f5e763984b2ce665e7cb 561 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 10 557 4.5E-266 T 12-10-2018 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 M892_20595 cebb9c0398cd6034f245ef2aad386621 302 Gene3D G3DSA:1.10.10.60 60 120 6.1E-16 T 12-10-2018 M892_20595 cebb9c0398cd6034f245ef2aad386621 302 SUPERFAMILY SSF55136 136 301 1.24E-22 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily M892_20595 cebb9c0398cd6034f245ef2aad386621 302 SMART SM00342 23 106 5.6E-29 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M892_20595 cebb9c0398cd6034f245ef2aad386621 302 SUPERFAMILY SSF46689 60 109 6.72E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_20595 cebb9c0398cd6034f245ef2aad386621 302 Pfam PF12833 Helix-turn-helix domain 29 107 1.6E-23 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M892_20595 cebb9c0398cd6034f245ef2aad386621 302 Pfam PF06445 GyrI-like small molecule binding domain 137 299 2.9E-17 T 12-10-2018 IPR029442 GyrI-like small molecule binding domain M892_20595 cebb9c0398cd6034f245ef2aad386621 302 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 60 102 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 M892_20595 cebb9c0398cd6034f245ef2aad386621 302 SUPERFAMILY SSF46689 7 57 2.55E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_20595 cebb9c0398cd6034f245ef2aad386621 302 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 75 90 2.3E-7 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 M892_20595 cebb9c0398cd6034f245ef2aad386621 302 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 90 106 2.3E-7 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 M892_20595 cebb9c0398cd6034f245ef2aad386621 302 SMART SM00871 135 300 2.0E-19 T 12-10-2018 IPR010499 Bacterial transcription activator, effector binding M892_20595 cebb9c0398cd6034f245ef2aad386621 302 Gene3D G3DSA:3.20.80.10 135 301 4.5E-28 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily M892_20595 cebb9c0398cd6034f245ef2aad386621 302 Gene3D G3DSA:1.10.10.60 2 59 4.5E-19 T 12-10-2018 M892_17215 1347d84cca47719fcbe7f4e694bf78bc 235 Pfam PF13489 Methyltransferase domain 52 201 7.4E-25 T 12-10-2018 M892_17215 1347d84cca47719fcbe7f4e694bf78bc 235 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 11 229 5.8E-87 T 12-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 M892_17215 1347d84cca47719fcbe7f4e694bf78bc 235 SUPERFAMILY SSF53335 15 229 2.65E-44 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M892_17215 1347d84cca47719fcbe7f4e694bf78bc 235 Gene3D G3DSA:3.40.50.150 11 234 1.8E-75 T 12-10-2018 M892_17215 1347d84cca47719fcbe7f4e694bf78bc 235 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 11 235 37.048 T 12-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 M892_22450 d61642d0a6f77aba897cf0cc7926b408 504 SMART SM00240 29 80 1.4E-8 T 12-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 M892_22450 d61642d0a6f77aba897cf0cc7926b408 504 SUPERFAMILY SSF49879 21 104 2.68E-24 T 12-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 M892_22450 d61642d0a6f77aba897cf0cc7926b408 504 Pfam PF00498 FHA domain 31 97 1.6E-16 T 12-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 M892_22450 d61642d0a6f77aba897cf0cc7926b408 504 Gene3D G3DSA:2.60.200.20 5 112 9.2E-22 T 12-10-2018 M892_13975 bc60b561fca046f263b1df6de6d5951d 560 SUPERFAMILY SSF53850 42 544 1.07E-106 T 12-10-2018 M892_13975 bc60b561fca046f263b1df6de6d5951d 560 Gene3D G3DSA:3.10.105.10 272 519 2.0E-195 T 12-10-2018 M892_13975 bc60b561fca046f263b1df6de6d5951d 560 Gene3D G3DSA:3.90.76.10 66 172 2.0E-195 T 12-10-2018 M892_13975 bc60b561fca046f263b1df6de6d5951d 560 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 84 106 - T 12-10-2018 IPR023765 Solute-binding protein family 5, conserved site M892_13975 bc60b561fca046f263b1df6de6d5951d 560 PIRSF PIRSF002741 5 542 1.2E-65 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 M892_13975 bc60b561fca046f263b1df6de6d5951d 560 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 79 456 1.0E-75 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain M892_13975 bc60b561fca046f263b1df6de6d5951d 560 Gene3D G3DSA:3.40.190.10 46 543 2.0E-195 T 12-10-2018 M892_08325 1807b4b946e68ca145ba7f353911dcc5 1077 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1062 13.062 T 12-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 M892_08325 1807b4b946e68ca145ba7f353911dcc5 1077 SMART SM00851 955 1041 3.5E-25 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain M892_08325 1807b4b946e68ca145ba7f353911dcc5 1077 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 M892_08325 1807b4b946e68ca145ba7f353911dcc5 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 1.6E-64 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 M892_08325 1807b4b946e68ca145ba7f353911dcc5 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 1.6E-64 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 M892_08325 1807b4b946e68ca145ba7f353911dcc5 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 1.6E-64 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 M892_08325 1807b4b946e68ca145ba7f353911dcc5 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 1.6E-64 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 M892_08325 1807b4b946e68ca145ba7f353911dcc5 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 1.6E-64 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 M892_08325 1807b4b946e68ca145ba7f353911dcc5 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 1.6E-64 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 M892_08325 1807b4b946e68ca145ba7f353911dcc5 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 1.6E-64 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 M892_08325 1807b4b946e68ca145ba7f353911dcc5 1077 SUPERFAMILY SSF52440 1 127 3.6E-50 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily M892_08325 1807b4b946e68ca145ba7f353911dcc5 1077 Gene3D G3DSA:1.10.1030.10 404 553 5.4E-52 T 12-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 M892_08325 1807b4b946e68ca145ba7f353911dcc5 1077 SUPERFAMILY SSF52440 556 675 3.17E-49 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily M892_08325 1807b4b946e68ca145ba7f353911dcc5 1077 SUPERFAMILY SSF52335 936 1071 7.2E-34 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily M892_08325 1807b4b946e68ca145ba7f353911dcc5 1077 SUPERFAMILY SSF56059 128 401 1.94E-108 T 12-10-2018 M892_08325 1807b4b946e68ca145ba7f353911dcc5 1077 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 709 723 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 M892_08325 1807b4b946e68ca145ba7f353911dcc5 1077 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 M892_08325 1807b4b946e68ca145ba7f353911dcc5 1077 Gene3D G3DSA:3.40.50.20 554 662 3.7E-49 T 12-10-2018 M892_08325 1807b4b946e68ca145ba7f353911dcc5 1077 Gene3D G3DSA:3.30.470.20 665 934 4.1E-123 T 12-10-2018 M892_08325 1807b4b946e68ca145ba7f353911dcc5 1077 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1067 13.332 T 12-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 M892_08325 1807b4b946e68ca145ba7f353911dcc5 1077 Gene3D G3DSA:3.40.50.20 1 116 2.5E-50 T 12-10-2018 M892_08325 1807b4b946e68ca145ba7f353911dcc5 1077 SUPERFAMILY SSF48108 396 554 4.84E-52 T 12-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 M892_08325 1807b4b946e68ca145ba7f353911dcc5 1077 SMART SM01096 424 547 7.0E-75 T 12-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 M892_08325 1807b4b946e68ca145ba7f353911dcc5 1077 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 838 845 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 M892_08325 1807b4b946e68ca145ba7f353911dcc5 1077 Gene3D G3DSA:3.30.470.20 119 403 7.2E-129 T 12-10-2018 M892_08325 1807b4b946e68ca145ba7f353911dcc5 1077 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 1.6E-40 T 12-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 M892_08325 1807b4b946e68ca145ba7f353911dcc5 1077 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 2.7E-72 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 M892_08325 1807b4b946e68ca145ba7f353911dcc5 1077 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 673 874 5.8E-37 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 M892_08325 1807b4b946e68ca145ba7f353911dcc5 1077 Pfam PF02142 MGS-like domain 956 1041 1.0E-15 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain M892_08325 1807b4b946e68ca145ba7f353911dcc5 1077 SUPERFAMILY SSF56059 673 932 3.71E-103 T 12-10-2018 M892_08325 1807b4b946e68ca145ba7f353911dcc5 1077 Gene3D G3DSA:3.40.50.1380 937 1072 3.5E-33 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily M892_08325 1807b4b946e68ca145ba7f353911dcc5 1077 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1052 0.0 T 12-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 M892_10590 b7785b2c5bedddca23185252c48e79d8 257 Gene3D G3DSA:3.40.50.300 1 255 1.3E-76 T 12-10-2018 M892_10590 b7785b2c5bedddca23185252c48e79d8 257 PIRSF PIRSF009320 2 71 1.6E-13 T 12-10-2018 M892_10590 b7785b2c5bedddca23185252c48e79d8 257 PIRSF PIRSF009320 88 252 5.8E-9 T 12-10-2018 M892_10590 b7785b2c5bedddca23185252c48e79d8 257 Pfam PF13614 AAA domain 2 178 7.4E-62 T 12-10-2018 IPR025669 AAA domain M892_10590 b7785b2c5bedddca23185252c48e79d8 257 SUPERFAMILY SSF52540 2 254 4.76E-67 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_16160 efb6ec642e949ebeb8262a1dad1b7208 765 Pfam PF01228 Glycine radical 630 746 9.6E-42 T 12-10-2018 IPR001150 Glycine radical domain GO:0003824 M892_16160 efb6ec642e949ebeb8262a1dad1b7208 765 SUPERFAMILY SSF51998 7 764 1.4E-277 T 12-10-2018 M892_16160 efb6ec642e949ebeb8262a1dad1b7208 765 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 11 765 0.0 T 12-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 M892_16160 efb6ec642e949ebeb8262a1dad1b7208 765 ProSitePatterns PS00850 Glycine radical domain signature. 735 743 - T 12-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site M892_16160 efb6ec642e949ebeb8262a1dad1b7208 765 Pfam PF02901 Pyruvate formate lyase-like 26 614 1.4E-196 T 12-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 M892_16160 efb6ec642e949ebeb8262a1dad1b7208 765 PIRSF PIRSF000379 8 765 0.0 T 12-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 M892_16160 efb6ec642e949ebeb8262a1dad1b7208 765 Gene3D G3DSA:3.20.70.20 5 765 0.0 T 12-10-2018 M892_27170 ef49ddcca0990c574c9f8949c64daa02 369 Pfam PF07143 CrtC N-terminal lipocalin domain 67 242 9.3E-56 T 12-10-2018 IPR010791 AttH domain M892_27170 ef49ddcca0990c574c9f8949c64daa02 369 Gene3D G3DSA:2.40.370.10 247 369 1.4E-32 T 12-10-2018 IPR023374 AttH-like domain superfamily M892_27170 ef49ddcca0990c574c9f8949c64daa02 369 Gene3D G3DSA:2.40.370.10 55 245 2.4E-66 T 12-10-2018 IPR023374 AttH-like domain superfamily M892_27170 ef49ddcca0990c574c9f8949c64daa02 369 SUPERFAMILY SSF159245 44 369 4.97E-105 T 12-10-2018 M892_27170 ef49ddcca0990c574c9f8949c64daa02 369 Pfam PF17186 Lipocalin-like domain 247 369 5.4E-42 T 12-10-2018 M892_01320 d13ad52c12ae0561f190911bc57650b8 323 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 4 320 9.9E-119 T 12-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family M892_01320 d13ad52c12ae0561f190911bc57650b8 323 SUPERFAMILY SSF53850 27 322 4.4E-90 T 12-10-2018 M892_01320 d13ad52c12ae0561f190911bc57650b8 323 Gene3D G3DSA:3.40.190.10 118 256 8.6E-110 T 12-10-2018 M892_01320 d13ad52c12ae0561f190911bc57650b8 323 Gene3D G3DSA:3.40.190.10 31 320 8.6E-110 T 12-10-2018 M892_01320 d13ad52c12ae0561f190911bc57650b8 323 Pfam PF16868 NMT1-like family 31 320 4.8E-98 T 12-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family M892_09145 9d1b74f85ebccade46914af1c7cba280 177 SUPERFAMILY SSF56053 83 177 7.8E-36 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_09145 9d1b74f85ebccade46914af1c7cba280 177 Gene3D G3DSA:3.90.930.12 1 82 4.6E-31 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_09145 9d1b74f85ebccade46914af1c7cba280 177 SUPERFAMILY SSF56053 1 82 4.45E-25 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_09145 9d1b74f85ebccade46914af1c7cba280 177 Gene3D G3DSA:3.90.930.12 83 177 2.5E-39 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_09145 9d1b74f85ebccade46914af1c7cba280 177 Pfam PF00347 Ribosomal protein L6 11 82 1.7E-20 T 12-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_09145 9d1b74f85ebccade46914af1c7cba280 177 Pfam PF00347 Ribosomal protein L6 91 164 1.4E-18 T 12-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_09145 9d1b74f85ebccade46914af1c7cba280 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.746 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 M892_09145 9d1b74f85ebccade46914af1c7cba280 177 PIRSF PIRSF002162 1 177 1.6E-46 T 12-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_09145 9d1b74f85ebccade46914af1c7cba280 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 1.4E-33 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 M892_09145 9d1b74f85ebccade46914af1c7cba280 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 1.4E-33 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 M892_09145 9d1b74f85ebccade46914af1c7cba280 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 1.4E-33 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 M892_09145 9d1b74f85ebccade46914af1c7cba280 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 12-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_09145 9d1b74f85ebccade46914af1c7cba280 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 8.2E-75 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 M892_15025 05f108af59d60888fbf56149f7c49c6b 416 TIGRFAM TIGR03503 TIGR03503: TIGR03503 family protein 24 400 7.6E-132 T 12-10-2018 IPR020010 Conserved hypothetical protein CHP03503 M892_00240 e5af5c448c68fef3ffd0388d0f747073 583 SMART SM00490 265 344 1.1E-10 T 12-10-2018 IPR001650 Helicase, C-terminal M892_00240 e5af5c448c68fef3ffd0388d0f747073 583 Gene3D G3DSA:3.40.50.300 209 367 2.7E-33 T 12-10-2018 M892_00240 e5af5c448c68fef3ffd0388d0f747073 583 SMART SM00487 1 177 1.8E-14 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain M892_00240 e5af5c448c68fef3ffd0388d0f747073 583 SUPERFAMILY SSF57829 425 465 2.75E-6 T 12-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 M892_00240 e5af5c448c68fef3ffd0388d0f747073 583 Pfam PF04851 Type III restriction enzyme, res subunit 2 154 9.2E-24 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 M892_00240 e5af5c448c68fef3ffd0388d0f747073 583 Pfam PF00271 Helicase conserved C-terminal domain 239 342 6.5E-14 T 12-10-2018 IPR001650 Helicase, C-terminal M892_00240 e5af5c448c68fef3ffd0388d0f747073 583 SUPERFAMILY SSF52540 48 362 3.39E-40 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_00240 e5af5c448c68fef3ffd0388d0f747073 583 Gene3D G3DSA:3.40.50.300 1 168 2.0E-29 T 12-10-2018 M892_28345 597d0ddf90bf1a6a4aab6c7d4c8ab67f 191 Pfam PF00665 Integrase core domain 72 181 6.3E-26 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 M892_28345 597d0ddf90bf1a6a4aab6c7d4c8ab67f 191 Gene3D G3DSA:3.30.420.10 59 185 9.0E-18 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M892_28345 597d0ddf90bf1a6a4aab6c7d4c8ab67f 191 SUPERFAMILY SSF53098 70 185 7.97E-37 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_28345 597d0ddf90bf1a6a4aab6c7d4c8ab67f 191 Pfam PF13276 HTH-like domain 2 50 9.2E-12 T 12-10-2018 IPR025948 HTH-like domain M892_02145 1f3cbefaf4357a737d5f166e8e1d17d6 320 Gene3D G3DSA:3.30.450.20 11 142 4.5E-29 T 12-10-2018 M892_02145 1f3cbefaf4357a737d5f166e8e1d17d6 320 SUPERFAMILY SSF55785 13 93 9.14E-7 T 12-10-2018 IPR035965 PAS domain superfamily M892_02145 1f3cbefaf4357a737d5f166e8e1d17d6 320 Gene3D G3DSA:3.30.70.270 150 319 7.2E-56 T 12-10-2018 M892_02145 1f3cbefaf4357a737d5f166e8e1d17d6 320 Pfam PF00990 Diguanylate cyclase, GGDEF domain 158 313 5.8E-44 T 12-10-2018 IPR000160 GGDEF domain M892_02145 1f3cbefaf4357a737d5f166e8e1d17d6 320 SUPERFAMILY SSF55073 161 317 2.9E-49 T 12-10-2018 IPR029787 Nucleotide cyclase M892_02145 1f3cbefaf4357a737d5f166e8e1d17d6 320 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 154 314 6.1E-54 T 12-10-2018 IPR000160 GGDEF domain M892_02145 1f3cbefaf4357a737d5f166e8e1d17d6 320 SMART SM00267 145 317 3.3E-56 T 12-10-2018 IPR000160 GGDEF domain M892_08545 c88b7432ebfda50f388b58615601a411 947 Gene3D G3DSA:1.20.120.1510 451 564 3.6E-33 T 12-10-2018 M892_08545 c88b7432ebfda50f388b58615601a411 947 SUPERFAMILY SSF81593 818 946 4.0E-32 T 12-10-2018 M892_08545 c88b7432ebfda50f388b58615601a411 947 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 30 944 19.287 T 12-10-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 M892_08545 c88b7432ebfda50f388b58615601a411 947 SUPERFAMILY SSF81301 24 289 1.8E-87 T 12-10-2018 M892_08545 c88b7432ebfda50f388b58615601a411 947 SUPERFAMILY SSF81301 528 818 1.54E-88 T 12-10-2018 M892_08545 c88b7432ebfda50f388b58615601a411 947 Gene3D G3DSA:3.30.460.10 114 287 6.8E-66 T 12-10-2018 M892_08545 c88b7432ebfda50f388b58615601a411 947 Pfam PF08335 GlnD PII-uridylyltransferase 830 913 1.9E-7 T 12-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 M892_08545 c88b7432ebfda50f388b58615601a411 947 Pfam PF08335 GlnD PII-uridylyltransferase 300 439 8.6E-45 T 12-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 M892_08545 c88b7432ebfda50f388b58615601a411 947 Gene3D G3DSA:1.20.120.330 288 443 4.6E-54 T 12-10-2018 M892_08545 c88b7432ebfda50f388b58615601a411 947 Gene3D G3DSA:1.10.4050.10 3 112 4.4E-12 T 12-10-2018 M892_08545 c88b7432ebfda50f388b58615601a411 947 SUPERFAMILY SSF81593 290 439 8.63E-42 T 12-10-2018 M892_08545 c88b7432ebfda50f388b58615601a411 947 Gene3D G3DSA:3.30.460.100 565 814 6.6E-92 T 12-10-2018 M892_08545 c88b7432ebfda50f388b58615601a411 947 Gene3D G3DSA:1.20.120.330 815 947 2.7E-43 T 12-10-2018 M892_08545 c88b7432ebfda50f388b58615601a411 947 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 556 807 7.6E-98 T 12-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 M892_08545 c88b7432ebfda50f388b58615601a411 947 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 33 279 1.4E-93 T 12-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 M892_22965 f7bc9c22ff31cd3af376ca1bdc3cd7c1 220 SUPERFAMILY SSF52172 4 116 5.41E-27 T 12-10-2018 IPR011006 CheY-like superfamily M892_22965 f7bc9c22ff31cd3af376ca1bdc3cd7c1 220 Pfam PF00072 Response regulator receiver domain 6 112 9.1E-17 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_22965 f7bc9c22ff31cd3af376ca1bdc3cd7c1 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 218 1.0E-23 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M892_22965 f7bc9c22ff31cd3af376ca1bdc3cd7c1 220 SMART SM00448 3 111 1.5E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_22965 f7bc9c22ff31cd3af376ca1bdc3cd7c1 220 Gene3D G3DSA:1.10.10.10 118 220 1.4E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_22965 f7bc9c22ff31cd3af376ca1bdc3cd7c1 220 SMART SM00862 147 218 6.0E-27 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M892_22965 f7bc9c22ff31cd3af376ca1bdc3cd7c1 220 Gene3D G3DSA:3.40.50.2300 1 117 1.6E-28 T 12-10-2018 M892_22965 f7bc9c22ff31cd3af376ca1bdc3cd7c1 220 SUPERFAMILY SSF46894 125 218 3.4E-29 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M892_24880 bb7a8c94adb7cccafc89994a98f54117 428 SMART SM00304 158 210 7.4E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M892_24880 bb7a8c94adb7cccafc89994a98f54117 428 SMART SM00388 211 276 2.1E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M892_24880 bb7a8c94adb7cccafc89994a98f54117 428 SUPERFAMILY SSF55874 266 428 1.96E-35 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_24880 bb7a8c94adb7cccafc89994a98f54117 428 SUPERFAMILY SSF158472 159 208 4.32E-5 T 12-10-2018 M892_24880 bb7a8c94adb7cccafc89994a98f54117 428 Pfam PF00512 His Kinase A (phospho-acceptor) domain 215 275 1.5E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M892_24880 bb7a8c94adb7cccafc89994a98f54117 428 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 321 427 2.9E-21 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_24880 bb7a8c94adb7cccafc89994a98f54117 428 Gene3D G3DSA:3.30.565.10 282 428 6.6E-33 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_24880 bb7a8c94adb7cccafc89994a98f54117 428 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 408 1.3E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_24880 bb7a8c94adb7cccafc89994a98f54117 428 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 427 1.3E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_24880 bb7a8c94adb7cccafc89994a98f54117 428 PRINTS PR00344 Bacterial sensor protein C-terminal signature 355 369 1.3E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_24880 bb7a8c94adb7cccafc89994a98f54117 428 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 383 1.3E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_24880 bb7a8c94adb7cccafc89994a98f54117 428 Pfam PF00672 HAMP domain 160 205 1.6E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M892_24880 bb7a8c94adb7cccafc89994a98f54117 428 Gene3D G3DSA:1.10.287.130 162 277 1.6E-23 T 12-10-2018 M892_24880 bb7a8c94adb7cccafc89994a98f54117 428 SMART SM00387 320 428 1.2E-31 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_24880 bb7a8c94adb7cccafc89994a98f54117 428 SUPERFAMILY SSF47384 194 276 1.51E-16 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M892_05145 43be9681217b5adebfe3f3fdfb18c5bf 288 Pfam PF01904 Protein of unknown function DUF72 23 262 2.4E-55 T 12-10-2018 IPR002763 Protein of unknown function DUF72 M892_05145 43be9681217b5adebfe3f3fdfb18c5bf 288 Gene3D G3DSA:3.20.20.410 2 237 4.9E-44 T 12-10-2018 IPR036520 UPF0759 superfamily M892_05145 43be9681217b5adebfe3f3fdfb18c5bf 288 SUPERFAMILY SSF117396 5 265 5.1E-74 T 12-10-2018 IPR036520 UPF0759 superfamily M892_06225 357e39e47751b746be676e50a49cb51b 262 SUPERFAMILY SSF52540 4 216 2.38E-51 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_06225 357e39e47751b746be676e50a49cb51b 262 Pfam PF00005 ABC transporter 20 148 1.8E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_06225 357e39e47751b746be676e50a49cb51b 262 SMART SM00382 29 199 1.6E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_06225 357e39e47751b746be676e50a49cb51b 262 Gene3D G3DSA:3.40.50.300 1 239 3.3E-55 T 12-10-2018 M892_02770 be9748070c2b53945ebde000a4837536 730 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 60 - T 12-10-2018 IPR010916 TonB box, conserved site M892_02770 be9748070c2b53945ebde000a4837536 730 SUPERFAMILY SSF56935 45 730 9.71E-100 T 12-10-2018 M892_02770 be9748070c2b53945ebde000a4837536 730 Gene3D G3DSA:2.170.130.10 69 197 7.3E-18 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily M892_02770 be9748070c2b53945ebde000a4837536 730 Pfam PF00593 TonB dependent receptor 304 727 3.9E-30 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel M892_02770 be9748070c2b53945ebde000a4837536 730 Gene3D G3DSA:2.40.170.20 198 730 3.2E-80 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily M892_02770 be9748070c2b53945ebde000a4837536 730 Pfam PF07715 TonB-dependent Receptor Plug Domain 88 182 3.1E-12 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain M892_02770 be9748070c2b53945ebde000a4837536 730 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 86 730 1.5E-158 T 12-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 M892_02770 be9748070c2b53945ebde000a4837536 730 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 713 730 - T 12-10-2018 IPR010917 TonB-dependent receptor, conserved site M892_10125 796955663583e74fcc345b06de573d15 397 Gene3D G3DSA:2.40.30.10 191 342 1.8E-131 T 12-10-2018 M892_10125 796955663583e74fcc345b06de573d15 397 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 365 372 1.0E-8 T 12-10-2018 M892_10125 796955663583e74fcc345b06de573d15 397 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 158 167 1.0E-8 T 12-10-2018 M892_10125 796955663583e74fcc345b06de573d15 397 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.0E-8 T 12-10-2018 M892_10125 796955663583e74fcc345b06de573d15 397 Gene3D G3DSA:3.50.50.60 8 391 1.8E-131 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_10125 796955663583e74fcc345b06de573d15 397 SUPERFAMILY SSF51905 1 397 1.21E-58 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_10125 796955663583e74fcc345b06de573d15 397 Gene3D G3DSA:1.10.8.260 265 325 1.8E-131 T 12-10-2018 IPR023166 HI0933-like insert domain superfamily M892_10125 796955663583e74fcc345b06de573d15 397 Pfam PF03486 HI0933-like protein 5 395 3.4E-157 T 12-10-2018 M892_10125 796955663583e74fcc345b06de573d15 397 SUPERFAMILY SSF160996 193 341 4.05E-42 T 12-10-2018 M892_10125 796955663583e74fcc345b06de573d15 397 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 7 395 5.5E-130 T 12-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like M892_10125 796955663583e74fcc345b06de573d15 397 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 155 173 2.2E-5 T 12-10-2018 M892_10125 796955663583e74fcc345b06de573d15 397 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 350 372 2.2E-5 T 12-10-2018 M892_10125 796955663583e74fcc345b06de573d15 397 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 2.2E-5 T 12-10-2018 M892_08005 35dae260667b30bea858157ee675ccaa 942 Pfam PF06827 Zinc finger found in FPG and IleRS 902 930 6.0E-7 T 12-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 M892_08005 35dae260667b30bea858157ee675ccaa 942 SUPERFAMILY SSF47323 657 933 1.07E-74 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 M892_08005 35dae260667b30bea858157ee675ccaa 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 5.1E-32 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 M892_08005 35dae260667b30bea858157ee675ccaa 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 241 264 5.1E-32 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 M892_08005 35dae260667b30bea858157ee675ccaa 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 406 421 5.1E-32 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 M892_08005 35dae260667b30bea858157ee675ccaa 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 531 544 5.1E-32 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 M892_08005 35dae260667b30bea858157ee675ccaa 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 566 575 5.1E-32 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 M892_08005 35dae260667b30bea858157ee675ccaa 942 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 645 3.2E-219 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 M892_08005 35dae260667b30bea858157ee675ccaa 942 Gene3D G3DSA:1.10.730.20 645 934 2.5E-87 T 12-10-2018 M892_08005 35dae260667b30bea858157ee675ccaa 942 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 933 21.505 T 12-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 M892_08005 35dae260667b30bea858157ee675ccaa 942 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 M892_08005 35dae260667b30bea858157ee675ccaa 942 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 848 4.7E-295 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 M892_08005 35dae260667b30bea858157ee675ccaa 942 SUPERFAMILY SSF50677 203 408 1.78E-54 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 M892_08005 35dae260667b30bea858157ee675ccaa 942 Gene3D G3DSA:3.40.50.620 25 634 8.3E-242 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M892_08005 35dae260667b30bea858157ee675ccaa 942 SUPERFAMILY SSF52374 4 652 3.34E-139 T 12-10-2018 M892_08005 35dae260667b30bea858157ee675ccaa 942 Pfam PF08264 Anticodon-binding domain of tRNA 690 846 2.8E-26 T 12-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 M892_08005 35dae260667b30bea858157ee675ccaa 942 Gene3D G3DSA:3.90.740.10 195 413 8.3E-242 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 M892_22355 602321a58d0999db5b4e63f05cb99089 542 SUPERFAMILY SSF55781 10 179 1.7E-14 T 12-10-2018 M892_22355 602321a58d0999db5b4e63f05cb99089 542 SUPERFAMILY SSF46689 489 539 1.4E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_22355 602321a58d0999db5b4e63f05cb99089 542 Pfam PF00158 Sigma-54 interaction domain 213 377 2.2E-69 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 M892_22355 602321a58d0999db5b4e63f05cb99089 542 Gene3D G3DSA:3.40.50.300 196 382 3.9E-61 T 12-10-2018 M892_22355 602321a58d0999db5b4e63f05cb99089 542 Pfam PF02954 Bacterial regulatory protein, Fis family 498 536 7.7E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M892_22355 602321a58d0999db5b4e63f05cb99089 542 Pfam PF13185 GAF domain 26 148 1.6E-8 T 12-10-2018 IPR003018 GAF domain GO:0005515 M892_22355 602321a58d0999db5b4e63f05cb99089 542 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 425 434 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site M892_22355 602321a58d0999db5b4e63f05cb99089 542 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 519 539 3.6E-5 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M892_22355 602321a58d0999db5b4e63f05cb99089 542 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 502 519 3.6E-5 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M892_22355 602321a58d0999db5b4e63f05cb99089 542 Gene3D G3DSA:1.10.10.60 473 540 4.8E-13 T 12-10-2018 M892_22355 602321a58d0999db5b4e63f05cb99089 542 SUPERFAMILY SSF52540 214 450 1.82E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_22355 602321a58d0999db5b4e63f05cb99089 542 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 235 248 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 M892_22355 602321a58d0999db5b4e63f05cb99089 542 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 297 312 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 M892_22355 602321a58d0999db5b4e63f05cb99089 542 Gene3D G3DSA:1.10.8.60 383 463 1.7E-21 T 12-10-2018 M892_22355 602321a58d0999db5b4e63f05cb99089 542 SMART SM00382 231 378 5.5E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_22355 602321a58d0999db5b4e63f05cb99089 542 Gene3D G3DSA:3.30.450.40 2 194 9.4E-16 T 12-10-2018 IPR029016 GAF-like domain superfamily M892_12265 05021aaf3ec810645cb07602a34c21b5 195 Hamap MF_01415 Glutathione-regulated potassium-efflux system ancillary protein KefG [kefG]. 5 189 50.45 T 12-10-2018 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG GO:0006813 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 M892_12265 05021aaf3ec810645cb07602a34c21b5 195 Pfam PF02525 Flavodoxin-like fold 10 176 7.7E-41 T 12-10-2018 IPR003680 Flavodoxin-like fold M892_12265 05021aaf3ec810645cb07602a34c21b5 195 Gene3D G3DSA:3.40.50.360 10 185 4.9E-52 T 12-10-2018 IPR029039 Flavoprotein-like superfamily M892_12265 05021aaf3ec810645cb07602a34c21b5 195 SUPERFAMILY SSF52218 9 181 5.87E-46 T 12-10-2018 IPR029039 Flavoprotein-like superfamily M892_02920 ea2f1df18b49016b35e0f5d83a71b551 565 Gene3D G3DSA:3.40.50.10730 147 351 4.7E-258 T 12-10-2018 IPR038364 Urocanase, central domain superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 M892_02920 ea2f1df18b49016b35e0f5d83a71b551 565 TIGRFAM TIGR01228 hutU: urocanate hydratase 15 556 4.8E-292 T 12-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 M892_02920 ea2f1df18b49016b35e0f5d83a71b551 565 SUPERFAMILY SSF111326 11 557 4.05E-260 T 12-10-2018 IPR036190 Urocanase superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 M892_02920 ea2f1df18b49016b35e0f5d83a71b551 565 Pfam PF17392 Urocanase C-terminal domain 354 548 1.3E-91 T 12-10-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 M892_02920 ea2f1df18b49016b35e0f5d83a71b551 565 PIRSF PIRSF001423 1 563 1.9E-295 T 12-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 M892_02920 ea2f1df18b49016b35e0f5d83a71b551 565 ProSitePatterns PS01233 Urocanase signature. 444 459 - T 12-10-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 M892_02920 ea2f1df18b49016b35e0f5d83a71b551 565 Hamap MF_00577 Urocanate hydratase [hutU]. 2 558 49.413 T 12-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 M892_02920 ea2f1df18b49016b35e0f5d83a71b551 565 Pfam PF17391 Urocanase N-terminal domain 17 143 1.9E-62 T 12-10-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 M892_02920 ea2f1df18b49016b35e0f5d83a71b551 565 Pfam PF01175 Urocanase Rossmann-like domain 146 351 9.1E-85 T 12-10-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 M892_02920 ea2f1df18b49016b35e0f5d83a71b551 565 Gene3D G3DSA:3.40.1770.10 22 544 4.7E-258 T 12-10-2018 M892_05315 01be5d94d61168641316557185c8223b 234 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 63 233 3.4E-59 T 12-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 M892_05315 01be5d94d61168641316557185c8223b 234 SUPERFAMILY SSF55120 49 233 3.52E-48 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 M892_05315 01be5d94d61168641316557185c8223b 234 Gene3D G3DSA:3.30.70.580 47 122 1.5E-26 T 12-10-2018 M892_05315 01be5d94d61168641316557185c8223b 234 Pfam PF00849 RNA pseudouridylate synthase 59 203 1.1E-16 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 M892_05315 01be5d94d61168641316557185c8223b 234 Gene3D G3DSA:3.30.70.1560 123 222 3.5E-40 T 12-10-2018 M892_05315 01be5d94d61168641316557185c8223b 234 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 94 108 - T 12-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 M892_24605 07b6eeb9c6966d9003dadf1be33a60c4 859 Gene3D G3DSA:2.20.20.100 208 271 3.6E-40 T 12-10-2018 M892_24605 07b6eeb9c6966d9003dadf1be33a60c4 859 ProDom PD142495 MEMBRANE SENSOR TRANSFERASE LUXQ 2.7.3.- TRANSMEMBRANE INNER PHOSPHORYLATION SENSORY AUTOINDUCER 9 361 0.0 T 12-10-2018 IPR015387 LuxQ, periplasmic GO:0004673|GO:0016791 M892_24605 07b6eeb9c6966d9003dadf1be33a60c4 859 SMART SM00387 594 711 5.3E-37 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_24605 07b6eeb9c6966d9003dadf1be33a60c4 859 SUPERFAMILY SSF103190 52 270 1.1E-71 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily M892_24605 07b6eeb9c6966d9003dadf1be33a60c4 859 SUPERFAMILY SSF52172 734 854 3.13E-28 T 12-10-2018 IPR011006 CheY-like superfamily M892_24605 07b6eeb9c6966d9003dadf1be33a60c4 859 Gene3D G3DSA:3.40.50.2300 722 855 3.2E-30 T 12-10-2018 M892_24605 07b6eeb9c6966d9003dadf1be33a60c4 859 Pfam PF00072 Response regulator receiver domain 737 846 1.3E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_24605 07b6eeb9c6966d9003dadf1be33a60c4 859 SUPERFAMILY SSF47384 470 548 3.34E-19 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M892_24605 07b6eeb9c6966d9003dadf1be33a60c4 859 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 594 709 6.7E-29 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_24605 07b6eeb9c6966d9003dadf1be33a60c4 859 Gene3D G3DSA:1.10.287.130 472 547 1.1E-21 T 12-10-2018 M892_24605 07b6eeb9c6966d9003dadf1be33a60c4 859 Gene3D G3DSA:3.30.565.10 548 715 1.7E-45 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_24605 07b6eeb9c6966d9003dadf1be33a60c4 859 SMART SM00448 735 847 3.1E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_24605 07b6eeb9c6966d9003dadf1be33a60c4 859 PRINTS PR00344 Bacterial sensor protein C-terminal signature 695 708 1.2E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_24605 07b6eeb9c6966d9003dadf1be33a60c4 859 PRINTS PR00344 Bacterial sensor protein C-terminal signature 654 664 1.2E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_24605 07b6eeb9c6966d9003dadf1be33a60c4 859 PRINTS PR00344 Bacterial sensor protein C-terminal signature 671 689 1.2E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_24605 07b6eeb9c6966d9003dadf1be33a60c4 859 PRINTS PR00344 Bacterial sensor protein C-terminal signature 636 650 1.2E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_24605 07b6eeb9c6966d9003dadf1be33a60c4 859 Gene3D G3DSA:3.30.450.220 51 207 8.7E-66 T 12-10-2018 M892_24605 07b6eeb9c6966d9003dadf1be33a60c4 859 Pfam PF09308 LuxQ, periplasmic 41 278 2.1E-96 T 12-10-2018 IPR015387 LuxQ, periplasmic GO:0004673|GO:0016791 M892_24605 07b6eeb9c6966d9003dadf1be33a60c4 859 SMART SM00388 482 547 3.0E-21 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M892_24605 07b6eeb9c6966d9003dadf1be33a60c4 859 Gene3D G3DSA:3.30.450.20 344 471 5.7E-10 T 12-10-2018 M892_24605 07b6eeb9c6966d9003dadf1be33a60c4 859 Pfam PF00512 His Kinase A (phospho-acceptor) domain 483 547 5.8E-19 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M892_24605 07b6eeb9c6966d9003dadf1be33a60c4 859 SUPERFAMILY SSF55874 536 709 5.24E-44 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_26355 ccf34fa70691dea389894644f9b5bb63 258 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 15 254 1.6E-58 T 12-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 M892_26355 ccf34fa70691dea389894644f9b5bb63 258 Pfam PF01311 Bacterial export proteins, family 1 14 243 5.2E-61 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 M892_26355 ccf34fa70691dea389894644f9b5bb63 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 80 99 1.4E-23 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 M892_26355 ccf34fa70691dea389894644f9b5bb63 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 1.4E-23 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 M892_26355 ccf34fa70691dea389894644f9b5bb63 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 179 201 1.4E-23 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 M892_26355 ccf34fa70691dea389894644f9b5bb63 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 201 220 1.4E-23 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 M892_25700 ceab2c0a5440bc6e16de8ddcb353de3f 593 Gene3D G3DSA:3.40.50.300 296 586 9.1E-65 T 12-10-2018 M892_25700 ceab2c0a5440bc6e16de8ddcb353de3f 593 Gene3D G3DSA:3.40.50.300 1 254 2.2E-67 T 12-10-2018 M892_25700 ceab2c0a5440bc6e16de8ddcb353de3f 593 Pfam PF00005 ABC transporter 20 170 5.1E-26 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_25700 ceab2c0a5440bc6e16de8ddcb353de3f 593 SMART SM00382 29 221 2.2E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_25700 ceab2c0a5440bc6e16de8ddcb353de3f 593 SMART SM00382 324 510 9.1E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_25700 ceab2c0a5440bc6e16de8ddcb353de3f 593 Pfam PF12558 ATP-binding cassette cobalt transporter 235 306 4.0E-21 T 12-10-2018 IPR022216 Putative ABC cobalt transporter M892_25700 ceab2c0a5440bc6e16de8ddcb353de3f 593 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_25700 ceab2c0a5440bc6e16de8ddcb353de3f 593 Pfam PF00005 ABC transporter 315 461 1.8E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_25700 ceab2c0a5440bc6e16de8ddcb353de3f 593 ProSitePatterns PS00211 ABC transporters family signature. 433 447 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_25700 ceab2c0a5440bc6e16de8ddcb353de3f 593 SUPERFAMILY SSF52540 298 524 6.18E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_25700 ceab2c0a5440bc6e16de8ddcb353de3f 593 SUPERFAMILY SSF52540 2 235 1.95E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_19800 0a1b9a173a570aeba1da88b5d246c2ec 352 PIRSF PIRSF026508 1 351 1.6E-70 T 12-10-2018 IPR008863 Toxic anion resistance M892_19800 0a1b9a173a570aeba1da88b5d246c2ec 352 Pfam PF05816 Toxic anion resistance protein (TelA) 22 349 3.1E-79 T 12-10-2018 IPR008863 Toxic anion resistance M892_11470 fc5999bcb6e5845710ed3154e7d736ad 303 Hamap MF_00215 Pantothenate kinase [coaA]. 1 303 176.018 T 12-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 M892_11470 fc5999bcb6e5845710ed3154e7d736ad 303 PIRSF PIRSF000545 1 303 2.3E-143 T 12-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 M892_11470 fc5999bcb6e5845710ed3154e7d736ad 303 SUPERFAMILY SSF52540 3 302 1.22E-72 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_11470 fc5999bcb6e5845710ed3154e7d736ad 303 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 78 228 5.6E-13 T 12-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 M892_11470 fc5999bcb6e5845710ed3154e7d736ad 303 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 1 303 6.2E-142 T 12-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 M892_11470 fc5999bcb6e5845710ed3154e7d736ad 303 Gene3D G3DSA:3.40.50.300 1 303 2.7E-92 T 12-10-2018 M892_08125 8b7c41e21456b1d791cb0b556b8ce5b0 305 Pfam PF00589 Phage integrase family 120 291 1.3E-52 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 M892_08125 8b7c41e21456b1d791cb0b556b8ce5b0 305 Gene3D G3DSA:1.10.150.130 10 105 1.5E-21 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal M892_08125 8b7c41e21456b1d791cb0b556b8ce5b0 305 Gene3D G3DSA:1.10.443.10 118 299 2.5E-72 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 M892_08125 8b7c41e21456b1d791cb0b556b8ce5b0 305 SUPERFAMILY SSF56349 113 303 6.18E-57 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 M892_08125 8b7c41e21456b1d791cb0b556b8ce5b0 305 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 16 305 2.2E-114 T 12-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 M892_08125 8b7c41e21456b1d791cb0b556b8ce5b0 305 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 13 305 55.178 T 12-10-2018 IPR023009 Tyrosine recombinase XerC/XerD M892_08125 8b7c41e21456b1d791cb0b556b8ce5b0 305 SUPERFAMILY SSF47823 11 107 1.43E-33 T 12-10-2018 M892_08125 8b7c41e21456b1d791cb0b556b8ce5b0 305 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 11 305 60.176 T 12-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 M892_08125 8b7c41e21456b1d791cb0b556b8ce5b0 305 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 15 97 2.4E-18 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 M892_16030 38600163acb8d66d49c290d3a08c5be1 316 Pfam PF01464 Transglycosylase SLT domain 130 231 1.9E-10 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 M892_16030 38600163acb8d66d49c290d3a08c5be1 316 SUPERFAMILY SSF53955 133 275 5.2E-10 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily M892_16030 38600163acb8d66d49c290d3a08c5be1 316 Gene3D G3DSA:1.10.530.10 129 292 6.0E-9 T 12-10-2018 M892_16030 38600163acb8d66d49c290d3a08c5be1 316 Pfam PF05509 TraY domain 11 55 1.3E-15 T 12-10-2018 IPR008876 Relaxosome protein TraY GO:0000746|GO:0003677 M892_21770 8491c9267a52a9df8943402567098350 302 SUPERFAMILY SSF46785 11 96 5.83E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_21770 8491c9267a52a9df8943402567098350 302 SUPERFAMILY SSF53850 99 301 2.53E-26 T 12-10-2018 M892_21770 8491c9267a52a9df8943402567098350 302 Pfam PF03466 LysR substrate binding domain 99 300 1.0E-25 T 12-10-2018 IPR005119 LysR, substrate-binding M892_21770 8491c9267a52a9df8943402567098350 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 71 4.8E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_21770 8491c9267a52a9df8943402567098350 302 Gene3D G3DSA:1.10.10.10 12 97 2.5E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_21770 8491c9267a52a9df8943402567098350 302 Gene3D G3DSA:3.40.190.290 100 299 8.3E-39 T 12-10-2018 M892_06830 2bf9ba4f90111c149b1168201ea53ea4 154 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 113 123 - T 12-10-2018 IPR020549 Endoribonuclease YbeY, conserved site M892_06830 2bf9ba4f90111c149b1168201ea53ea4 154 SUPERFAMILY SSF55486 3 150 7.32E-50 T 12-10-2018 M892_06830 2bf9ba4f90111c149b1168201ea53ea4 154 Pfam PF02130 Uncharacterized protein family UPF0054 20 142 2.8E-38 T 12-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 M892_06830 2bf9ba4f90111c149b1168201ea53ea4 154 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 4 147 24.674 T 12-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 M892_06830 2bf9ba4f90111c149b1168201ea53ea4 154 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 39 143 6.1E-38 T 12-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 M892_06830 2bf9ba4f90111c149b1168201ea53ea4 154 Gene3D G3DSA:3.40.390.30 1 154 5.3E-60 T 12-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 M892_18395 eb302945fc45a0846df6318739cb295c 295 Gene3D G3DSA:3.40.1190.20 5 288 2.5E-102 T 12-10-2018 IPR029056 Ribokinase-like M892_18395 eb302945fc45a0846df6318739cb295c 295 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 25 282 1.4E-101 T 12-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 M892_18395 eb302945fc45a0846df6318739cb295c 295 Pfam PF08543 Phosphomethylpyrimidine kinase 32 280 1.4E-94 T 12-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 M892_18395 eb302945fc45a0846df6318739cb295c 295 SUPERFAMILY SSF53613 22 283 4.68E-82 T 12-10-2018 IPR029056 Ribokinase-like M892_24465 5e022670904741f5178662cdfdb74a53 204 SMART SM00421 139 196 2.4E-22 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_24465 5e022670904741f5178662cdfdb74a53 204 Pfam PF00196 Bacterial regulatory proteins, luxR family 141 195 4.6E-22 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_24465 5e022670904741f5178662cdfdb74a53 204 SUPERFAMILY SSF52172 1 128 4.55E-32 T 12-10-2018 IPR011006 CheY-like superfamily M892_24465 5e022670904741f5178662cdfdb74a53 204 ProSitePatterns PS00622 LuxR-type HTH domain signature. 156 183 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_24465 5e022670904741f5178662cdfdb74a53 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 184 4.4E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_24465 5e022670904741f5178662cdfdb74a53 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 142 156 4.4E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_24465 5e022670904741f5178662cdfdb74a53 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 172 4.4E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_24465 5e022670904741f5178662cdfdb74a53 204 SMART SM00448 1 111 5.5E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_24465 5e022670904741f5178662cdfdb74a53 204 SUPERFAMILY SSF46894 125 198 2.14E-20 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M892_24465 5e022670904741f5178662cdfdb74a53 204 Gene3D G3DSA:3.40.50.12740 1 199 2.4E-63 T 12-10-2018 M892_24465 5e022670904741f5178662cdfdb74a53 204 Pfam PF00072 Response regulator receiver domain 1 111 2.1E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_14685 68339faaccf7b96213f61353658402d1 194 Pfam PF04542 Sigma-70 region 2 34 99 5.7E-17 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 M892_14685 68339faaccf7b96213f61353658402d1 194 SUPERFAMILY SSF88659 127 189 9.35E-15 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like M892_14685 68339faaccf7b96213f61353658402d1 194 Gene3D G3DSA:1.10.1740.10 14 96 1.8E-23 T 12-10-2018 M892_14685 68339faaccf7b96213f61353658402d1 194 Gene3D G3DSA:1.10.10.10 109 191 1.3E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_14685 68339faaccf7b96213f61353658402d1 194 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 27 188 4.5E-30 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 M892_14685 68339faaccf7b96213f61353658402d1 194 SUPERFAMILY SSF88946 9 118 4.32E-26 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 M892_14685 68339faaccf7b96213f61353658402d1 194 Pfam PF04545 Sigma-70, region 4 139 187 1.6E-13 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 M892_01145 39385609d949c2b87b2e74f0191fb059 249 Pfam PF00929 Exonuclease 60 230 5.2E-17 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III M892_01145 39385609d949c2b87b2e74f0191fb059 249 SUPERFAMILY SSF53098 51 238 1.36E-40 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_01145 39385609d949c2b87b2e74f0191fb059 249 Gene3D G3DSA:3.30.420.10 54 238 7.8E-36 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M892_01145 39385609d949c2b87b2e74f0191fb059 249 SMART SM00479 58 239 6.8E-26 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III M892_20335 6ca7e2931707f5c9f469a00673ce436e 1059 SUPERFAMILY SSF82714 716 800 3.4E-18 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M892_20335 6ca7e2931707f5c9f469a00673ce436e 1059 Gene3D G3DSA:3.30.2090.10 716 804 6.4E-273 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M892_20335 6ca7e2931707f5c9f469a00673ce436e 1059 Pfam PF00873 AcrB/AcrD/AcrF family 5 1032 3.0E-245 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_20335 6ca7e2931707f5c9f469a00673ce436e 1059 SUPERFAMILY SSF82866 798 1036 4.45E-51 T 12-10-2018 M892_20335 6ca7e2931707f5c9f469a00673ce436e 1059 SUPERFAMILY SSF82866 294 498 1.96E-42 T 12-10-2018 M892_20335 6ca7e2931707f5c9f469a00673ce436e 1059 SUPERFAMILY SSF82714 185 269 3.27E-17 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M892_20335 6ca7e2931707f5c9f469a00673ce436e 1059 Gene3D G3DSA:3.30.70.1320 135 328 6.4E-273 T 12-10-2018 M892_20335 6ca7e2931707f5c9f469a00673ce436e 1059 Gene3D G3DSA:3.30.70.1430 42 812 6.4E-273 T 12-10-2018 M892_20335 6ca7e2931707f5c9f469a00673ce436e 1059 Gene3D G3DSA:3.30.70.1440 665 862 6.4E-273 T 12-10-2018 M892_20335 6ca7e2931707f5c9f469a00673ce436e 1059 Gene3D G3DSA:1.20.1640.10 509 1030 6.4E-273 T 12-10-2018 M892_20335 6ca7e2931707f5c9f469a00673ce436e 1059 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1042 0.0 T 12-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 M892_20335 6ca7e2931707f5c9f469a00673ce436e 1059 Gene3D G3DSA:3.30.70.1430 562 664 6.4E-273 T 12-10-2018 M892_20335 6ca7e2931707f5c9f469a00673ce436e 1059 Gene3D G3DSA:3.30.2090.10 182 274 6.4E-273 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M892_20335 6ca7e2931707f5c9f469a00673ce436e 1059 SUPERFAMILY SSF82693 46 127 1.91E-19 T 12-10-2018 M892_20335 6ca7e2931707f5c9f469a00673ce436e 1059 SUPERFAMILY SSF82693 137 328 2.41E-22 T 12-10-2018 M892_20335 6ca7e2931707f5c9f469a00673ce436e 1059 Gene3D G3DSA:1.20.1640.10 15 508 6.4E-273 T 12-10-2018 M892_20335 6ca7e2931707f5c9f469a00673ce436e 1059 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 7.2E-32 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_20335 6ca7e2931707f5c9f469a00673ce436e 1059 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 7.2E-32 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_20335 6ca7e2931707f5c9f469a00673ce436e 1059 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 7.2E-32 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_20335 6ca7e2931707f5c9f469a00673ce436e 1059 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 7.2E-32 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_20335 6ca7e2931707f5c9f469a00673ce436e 1059 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 7.2E-32 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_20335 6ca7e2931707f5c9f469a00673ce436e 1059 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 7.2E-32 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_20335 6ca7e2931707f5c9f469a00673ce436e 1059 PRINTS PR00702 Acriflavin resistance protein family signature 545 562 7.2E-32 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_07910 e09c46079e5b435ee438353231bc8194 183 SUPERFAMILY SSF52972 10 179 1.44E-61 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like M892_07910 e09c46079e5b435ee438353231bc8194 183 Gene3D G3DSA:3.90.950.10 3 182 4.9E-70 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like M892_07910 e09c46079e5b435ee438353231bc8194 183 Hamap MF_00648 Non-canonical purine NTP phosphatase. 10 179 30.767 T 12-10-2018 IPR002786 Non-canonical purine NTP phosphatase M892_07910 e09c46079e5b435ee438353231bc8194 183 TIGRFAM TIGR00258 TIGR00258: inosine/xanthosine triphosphatase 14 178 1.9E-47 T 12-10-2018 IPR002786 Non-canonical purine NTP phosphatase M892_07910 e09c46079e5b435ee438353231bc8194 183 Pfam PF01931 Protein of unknown function DUF84 15 173 9.6E-59 T 12-10-2018 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 M892_07040 f81b06588e13d87a6475d6084f05a43b 517 Pfam PF13007 Transposase C of IS166 homeodomain 42 115 3.8E-14 T 12-10-2018 IPR024463 Transposase TnpC, homeodomain M892_07040 f81b06588e13d87a6475d6084f05a43b 517 Pfam PF13005 zinc-finger binding domain of transposase IS66 123 167 1.5E-16 T 12-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 M892_07040 f81b06588e13d87a6475d6084f05a43b 517 Pfam PF03050 Transposase IS66 family 187 470 2.1E-101 T 12-10-2018 IPR004291 Transposase, IS66 M892_07040 f81b06588e13d87a6475d6084f05a43b 517 Pfam PF13817 IS66 C-terminal element 477 513 7.6E-8 T 12-10-2018 IPR039552 Transposase IS66, C-terminal M892_28595 f81b06588e13d87a6475d6084f05a43b 517 Pfam PF13007 Transposase C of IS166 homeodomain 42 115 3.8E-14 T 12-10-2018 IPR024463 Transposase TnpC, homeodomain M892_28595 f81b06588e13d87a6475d6084f05a43b 517 Pfam PF13005 zinc-finger binding domain of transposase IS66 123 167 1.5E-16 T 12-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 M892_28595 f81b06588e13d87a6475d6084f05a43b 517 Pfam PF03050 Transposase IS66 family 187 470 2.1E-101 T 12-10-2018 IPR004291 Transposase, IS66 M892_28595 f81b06588e13d87a6475d6084f05a43b 517 Pfam PF13817 IS66 C-terminal element 477 513 7.6E-8 T 12-10-2018 IPR039552 Transposase IS66, C-terminal M892_18470 f81b06588e13d87a6475d6084f05a43b 517 Pfam PF13007 Transposase C of IS166 homeodomain 42 115 3.8E-14 T 12-10-2018 IPR024463 Transposase TnpC, homeodomain M892_18470 f81b06588e13d87a6475d6084f05a43b 517 Pfam PF13005 zinc-finger binding domain of transposase IS66 123 167 1.5E-16 T 12-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 M892_18470 f81b06588e13d87a6475d6084f05a43b 517 Pfam PF03050 Transposase IS66 family 187 470 2.1E-101 T 12-10-2018 IPR004291 Transposase, IS66 M892_18470 f81b06588e13d87a6475d6084f05a43b 517 Pfam PF13817 IS66 C-terminal element 477 513 7.6E-8 T 12-10-2018 IPR039552 Transposase IS66, C-terminal M892_05660 f81b06588e13d87a6475d6084f05a43b 517 Pfam PF13007 Transposase C of IS166 homeodomain 42 115 3.8E-14 T 12-10-2018 IPR024463 Transposase TnpC, homeodomain M892_05660 f81b06588e13d87a6475d6084f05a43b 517 Pfam PF13005 zinc-finger binding domain of transposase IS66 123 167 1.5E-16 T 12-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 M892_05660 f81b06588e13d87a6475d6084f05a43b 517 Pfam PF03050 Transposase IS66 family 187 470 2.1E-101 T 12-10-2018 IPR004291 Transposase, IS66 M892_05660 f81b06588e13d87a6475d6084f05a43b 517 Pfam PF13817 IS66 C-terminal element 477 513 7.6E-8 T 12-10-2018 IPR039552 Transposase IS66, C-terminal M892_21440 f454c7d419adfcf1d8c24671b6d8cf0f 169 SUPERFAMILY SSF53927 30 165 9.03E-42 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 M892_21440 f454c7d419adfcf1d8c24671b6d8cf0f 169 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 30 127 2.8E-18 T 12-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain M892_21440 f454c7d419adfcf1d8c24671b6d8cf0f 169 Gene3D G3DSA:3.40.140.10 19 168 5.1E-41 T 12-10-2018 M892_21440 f454c7d419adfcf1d8c24671b6d8cf0f 169 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 77 115 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 M892_26325 796102bb28ba41a9944541565bcc8037 444 SUPERFAMILY SSF52540 130 365 1.03E-72 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_26325 796102bb28ba41a9944541565bcc8037 444 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 336 345 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site M892_26325 796102bb28ba41a9944541565bcc8037 444 SMART SM00382 146 289 1.2E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_26325 796102bb28ba41a9944541565bcc8037 444 Gene3D G3DSA:3.40.50.2300 1 118 1.9E-10 T 12-10-2018 M892_26325 796102bb28ba41a9944541565bcc8037 444 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 212 227 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 M892_26325 796102bb28ba41a9944541565bcc8037 444 Gene3D G3DSA:1.10.8.60 297 372 2.1E-22 T 12-10-2018 M892_26325 796102bb28ba41a9944541565bcc8037 444 Gene3D G3DSA:1.10.10.60 379 437 2.0E-10 T 12-10-2018 M892_26325 796102bb28ba41a9944541565bcc8037 444 SUPERFAMILY SSF46689 336 427 5.38E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_26325 796102bb28ba41a9944541565bcc8037 444 SUPERFAMILY SSF52172 2 170 2.42E-18 T 12-10-2018 IPR011006 CheY-like superfamily M892_26325 796102bb28ba41a9944541565bcc8037 444 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 150 163 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 M892_26325 796102bb28ba41a9944541565bcc8037 444 Gene3D G3DSA:3.40.50.300 119 296 1.3E-66 T 12-10-2018 M892_26325 796102bb28ba41a9944541565bcc8037 444 Pfam PF02954 Bacterial regulatory protein, Fis family 391 427 3.5E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M892_26325 796102bb28ba41a9944541565bcc8037 444 Pfam PF00158 Sigma-54 interaction domain 127 292 7.8E-71 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 M892_18310 3c3bbc4bee3174a25b2170ac9ef45473 213 Gene3D G3DSA:1.20.950.20 1 158 2.9E-12 T 12-10-2018 M892_18310 3c3bbc4bee3174a25b2170ac9ef45473 213 Pfam PF01292 Prokaryotic cytochrome b561 4 170 3.1E-20 T 12-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 M892_18310 3c3bbc4bee3174a25b2170ac9ef45473 213 SUPERFAMILY SSF81342 2 172 2.0E-32 T 12-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 M892_00980 19229c4001403a628f358b68de27a623 313 SUPERFAMILY SSF52317 18 297 3.96E-102 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M892_00980 19229c4001403a628f358b68de27a623 313 Pfam PF04204 Homoserine O-succinyltransferase 2 299 2.0E-135 T 12-10-2018 IPR033752 MetA family M892_00980 19229c4001403a628f358b68de27a623 313 PIRSF PIRSF000450 1 309 4.3E-148 T 12-10-2018 IPR033752 MetA family M892_00980 19229c4001403a628f358b68de27a623 313 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 301 7.6E-163 T 12-10-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 M892_00980 19229c4001403a628f358b68de27a623 313 Hamap MF_00295 Homoserine O-succinyltransferase [metAS]. 31 299 41.201 T 12-10-2018 IPR033752 MetA family M892_00980 19229c4001403a628f358b68de27a623 313 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 3.0E-128 T 12-10-2018 M892_00980 19229c4001403a628f358b68de27a623 313 Gene3D G3DSA:3.40.50.880 1 301 5.8E-125 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M892_24135 2fa2741cb37f3a2b286193a09142f099 718 SUPERFAMILY SSF46626 211 289 5.38E-18 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M892_24135 2fa2741cb37f3a2b286193a09142f099 718 SUPERFAMILY SSF46626 590 700 9.74E-15 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M892_24135 2fa2741cb37f3a2b286193a09142f099 718 Gene3D G3DSA:1.10.760.10 291 413 4.9E-10 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M892_24135 2fa2741cb37f3a2b286193a09142f099 718 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 590 669 9.1E-5 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_24135 2fa2741cb37f3a2b286193a09142f099 718 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 211 286 9.4E-13 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_24135 2fa2741cb37f3a2b286193a09142f099 718 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 123 196 1.8E-10 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_24135 2fa2741cb37f3a2b286193a09142f099 718 Gene3D G3DSA:1.20.58.1490 1 91 7.8E-19 T 12-10-2018 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily M892_24135 2fa2741cb37f3a2b286193a09142f099 718 SUPERFAMILY SSF46626 459 566 1.17E-10 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M892_24135 2fa2741cb37f3a2b286193a09142f099 718 SUPERFAMILY SSF46626 300 423 6.38E-19 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M892_24135 2fa2741cb37f3a2b286193a09142f099 718 SUPERFAMILY SSF46626 54 201 1.13E-25 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M892_24135 2fa2741cb37f3a2b286193a09142f099 718 Gene3D G3DSA:1.10.760.10 102 287 8.8E-54 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M892_24135 2fa2741cb37f3a2b286193a09142f099 718 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 42 81 5.5E-7 T 12-10-2018 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal M892_24135 2fa2741cb37f3a2b286193a09142f099 718 Pfam PF00034 Cytochrome c 306 403 4.5E-7 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_24135 2fa2741cb37f3a2b286193a09142f099 718 Gene3D G3DSA:1.10.760.10 177 266 8.8E-54 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M892_24135 2fa2741cb37f3a2b286193a09142f099 718 Gene3D G3DSA:1.10.760.10 581 697 9.1E-22 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M892_06300 4b4709b079ed3e698db34425dd8b71c1 180 SUPERFAMILY SSF82808 66 179 1.31E-49 T 12-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 M892_06300 4b4709b079ed3e698db34425dd8b71c1 180 Gene3D G3DSA:1.10.1220.10 1 41 1.0E-23 T 12-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 M892_06300 4b4709b079ed3e698db34425dd8b71c1 180 SUPERFAMILY SSF47598 1 35 8.89E-14 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 M892_06300 4b4709b079ed3e698db34425dd8b71c1 180 Gene3D G3DSA:1.20.1380.10 65 180 1.6E-48 T 12-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 M892_06300 4b4709b079ed3e698db34425dd8b71c1 180 Hamap MF_00908 Negative modulator of initiation of replication [seqA]. 1 180 41.686 T 12-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 M892_06300 4b4709b079ed3e698db34425dd8b71c1 180 Pfam PF17206 SeqA protein N-terminal domain 1 36 3.2E-24 T 12-10-2018 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal M892_06300 4b4709b079ed3e698db34425dd8b71c1 180 Pfam PF03925 SeqA protein C-terminal domain 71 178 7.5E-47 T 12-10-2018 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 M892_06300 4b4709b079ed3e698db34425dd8b71c1 180 PIRSF PIRSF019401 1 180 8.2E-54 T 12-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 M892_13735 19f213ed2b8d9fcd803e9dbef936ed0f 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 167 195 2.9E-19 T 12-10-2018 IPR003004 GspF/PilC family M892_13735 19f213ed2b8d9fcd803e9dbef936ed0f 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 68 80 2.9E-19 T 12-10-2018 IPR003004 GspF/PilC family M892_13735 19f213ed2b8d9fcd803e9dbef936ed0f 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 387 406 2.9E-19 T 12-10-2018 IPR003004 GspF/PilC family M892_13735 19f213ed2b8d9fcd803e9dbef936ed0f 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 371 385 2.9E-19 T 12-10-2018 IPR003004 GspF/PilC family M892_13735 19f213ed2b8d9fcd803e9dbef936ed0f 407 Gene3D G3DSA:1.20.81.30 58 174 3.0E-29 T 12-10-2018 M892_13735 19f213ed2b8d9fcd803e9dbef936ed0f 407 Pfam PF00482 Type II secretion system (T2SS), protein F 72 195 4.1E-31 T 12-10-2018 IPR018076 Type II secretion system F domain M892_13735 19f213ed2b8d9fcd803e9dbef936ed0f 407 Pfam PF00482 Type II secretion system (T2SS), protein F 276 398 2.3E-28 T 12-10-2018 IPR018076 Type II secretion system F domain M892_13735 19f213ed2b8d9fcd803e9dbef936ed0f 407 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 167 195 - T 12-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 M892_13735 19f213ed2b8d9fcd803e9dbef936ed0f 407 Gene3D G3DSA:1.20.81.30 259 370 6.5E-28 T 12-10-2018 M892_07885 12a841204163cb94e9704678c91a7c53 325 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 15 313 2.1E-105 T 12-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 M892_07885 12a841204163cb94e9704678c91a7c53 325 SMART SM00363 18 83 3.1E-9 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_07885 12a841204163cb94e9704678c91a7c53 325 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 12-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 M892_07885 12a841204163cb94e9704678c91a7c53 325 Pfam PF00849 RNA pseudouridylate synthase 92 241 1.5E-30 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 M892_07885 12a841204163cb94e9704678c91a7c53 325 Pfam PF01479 S4 domain 18 65 9.0E-10 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_07885 12a841204163cb94e9704678c91a7c53 325 SUPERFAMILY SSF55120 77 316 1.3E-80 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 M892_07885 12a841204163cb94e9704678c91a7c53 325 Gene3D G3DSA:3.10.290.10 2 76 5.2E-24 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 M892_07885 12a841204163cb94e9704678c91a7c53 325 Gene3D G3DSA:3.30.2350.10 85 316 4.2E-73 T 12-10-2018 M892_07885 12a841204163cb94e9704678c91a7c53 325 SUPERFAMILY SSF55174 17 68 3.7E-11 T 12-10-2018 M892_03940 590175c41175c47421d581922780e438 275 Pfam PF13460 NAD(P)H-binding 9 175 2.3E-15 T 12-10-2018 IPR016040 NAD(P)-binding domain M892_03940 590175c41175c47421d581922780e438 275 Gene3D G3DSA:3.40.50.720 1 275 5.4E-46 T 12-10-2018 M892_03940 590175c41175c47421d581922780e438 275 SUPERFAMILY SSF51735 8 268 2.1E-27 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_04255 59e5503f8c49b21c89ada67dec653783 514 Pfam PF13005 zinc-finger binding domain of transposase IS66 120 164 1.6E-16 T 12-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 M892_04255 59e5503f8c49b21c89ada67dec653783 514 Pfam PF03050 Transposase IS66 family 184 467 2.0E-101 T 12-10-2018 IPR004291 Transposase, IS66 M892_04255 59e5503f8c49b21c89ada67dec653783 514 Pfam PF13007 Transposase C of IS166 homeodomain 42 112 2.2E-14 T 12-10-2018 IPR024463 Transposase TnpC, homeodomain M892_04255 59e5503f8c49b21c89ada67dec653783 514 Pfam PF13817 IS66 C-terminal element 474 510 7.6E-8 T 12-10-2018 IPR039552 Transposase IS66, C-terminal M892_13670 8e61a055411223b173140a7e6581ad6a 172 PIRSF PIRSF006160 1 162 4.5E-67 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 M892_13670 8e61a055411223b173140a7e6581ad6a 172 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 152 1.3E-61 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 M892_13670 8e61a055411223b173140a7e6581ad6a 172 SUPERFAMILY SSF63411 4 162 2.01E-66 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 M892_13670 8e61a055411223b173140a7e6581ad6a 172 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 159 35.53 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 M892_13670 8e61a055411223b173140a7e6581ad6a 172 Gene3D G3DSA:3.30.1360.80 1 172 1.8E-73 T 12-10-2018 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 M892_13670 8e61a055411223b173140a7e6581ad6a 172 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 9 149 6.0E-81 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 M892_13670 8e61a055411223b173140a7e6581ad6a 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 5.5E-52 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 M892_13670 8e61a055411223b173140a7e6581ad6a 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 5.5E-52 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 M892_13670 8e61a055411223b173140a7e6581ad6a 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 5.5E-52 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 M892_13670 8e61a055411223b173140a7e6581ad6a 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 5.5E-52 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 M892_13670 8e61a055411223b173140a7e6581ad6a 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 5.5E-52 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 M892_04820 b9299c38f55bdfb7da0a7793758a5aca 399 Pfam PF01609 Transposase DDE domain 92 327 6.8E-16 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_04820 b9299c38f55bdfb7da0a7793758a5aca 399 SUPERFAMILY SSF53098 1 382 7.05E-53 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_05715 b9299c38f55bdfb7da0a7793758a5aca 399 Pfam PF01609 Transposase DDE domain 92 327 6.8E-16 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_05715 b9299c38f55bdfb7da0a7793758a5aca 399 SUPERFAMILY SSF53098 1 382 7.05E-53 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_28400 b9299c38f55bdfb7da0a7793758a5aca 399 Pfam PF01609 Transposase DDE domain 92 327 6.8E-16 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_28400 b9299c38f55bdfb7da0a7793758a5aca 399 SUPERFAMILY SSF53098 1 382 7.05E-53 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_13175 55c1578dfa319bb72d0864ffdf089f9f 239 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 23 238 30.572 T 12-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 M892_13175 55c1578dfa319bb72d0864ffdf089f9f 239 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 47 238 4.8E-68 T 12-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 M892_13175 55c1578dfa319bb72d0864ffdf089f9f 239 Gene3D G3DSA:3.40.50.150 29 239 2.2E-70 T 12-10-2018 M892_13175 55c1578dfa319bb72d0864ffdf089f9f 239 Pfam PF02390 Putative methyltransferase 62 232 1.4E-58 T 12-10-2018 M892_13175 55c1578dfa319bb72d0864ffdf089f9f 239 SUPERFAMILY SSF53335 15 237 3.01E-35 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M892_28490 acff3d5eac754016c7e0284d7016fd38 221 SUPERFAMILY SSF101082 23 204 3.53E-19 T 12-10-2018 M892_28490 acff3d5eac754016c7e0284d7016fd38 221 Pfam PF07996 Type IV secretion system proteins 23 204 3.7E-20 T 12-10-2018 IPR014158 Type IV secretion system, VirB5 M892_28490 acff3d5eac754016c7e0284d7016fd38 221 Gene3D G3DSA:1.20.58.430 23 205 2.5E-10 T 12-10-2018 IPR023220 Type IV secretion system, VirB5-domain M892_19630 01eb56a9ae2fc7bf54a8433907a98652 442 Gene3D G3DSA:2.40.420.20 362 424 3.8E-32 T 12-10-2018 M892_19630 01eb56a9ae2fc7bf54a8433907a98652 442 Gene3D G3DSA:2.40.50.100 66 252 3.8E-32 T 12-10-2018 M892_19630 01eb56a9ae2fc7bf54a8433907a98652 442 Gene3D G3DSA:1.10.287.470 103 218 3.8E-32 T 12-10-2018 M892_19630 01eb56a9ae2fc7bf54a8433907a98652 442 Gene3D G3DSA:2.40.30.170 60 361 3.8E-32 T 12-10-2018 M892_19630 01eb56a9ae2fc7bf54a8433907a98652 442 SUPERFAMILY SSF111369 64 356 2.09E-7 T 12-10-2018 M892_12185 0c0cc3da5dc7924e6166b34e3639b28a 830 SUPERFAMILY SSF50249 145 244 2.1E-16 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M892_12185 0c0cc3da5dc7924e6166b34e3639b28a 830 ProSitePatterns PS01175 Ribonuclease II family signature. 562 586 - T 12-10-2018 IPR022966 Ribonuclease II/R, conserved site M892_12185 0c0cc3da5dc7924e6166b34e3639b28a 830 Pfam PF00575 S1 RNA binding domain 650 731 6.9E-13 T 12-10-2018 IPR003029 S1 domain GO:0003676 M892_12185 0c0cc3da5dc7924e6166b34e3639b28a 830 Gene3D G3DSA:2.40.50.140 77 155 1.7E-11 T 12-10-2018 M892_12185 0c0cc3da5dc7924e6166b34e3639b28a 830 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 71 733 2.3E-255 T 12-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 M892_12185 0c0cc3da5dc7924e6166b34e3639b28a 830 Hamap MF_01895 Ribonuclease R [rnr]. 42 733 59.303 T 12-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 M892_12185 0c0cc3da5dc7924e6166b34e3639b28a 830 Pfam PF00773 RNB domain 267 594 1.6E-108 T 12-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 M892_12185 0c0cc3da5dc7924e6166b34e3639b28a 830 SMART SM00955 267 595 1.1E-183 T 12-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 M892_12185 0c0cc3da5dc7924e6166b34e3639b28a 830 TIGRFAM TIGR02063 RNase_R: ribonuclease R 23 734 2.0E-275 T 12-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 M892_12185 0c0cc3da5dc7924e6166b34e3639b28a 830 SUPERFAMILY SSF50249 227 650 5.71E-144 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M892_12185 0c0cc3da5dc7924e6166b34e3639b28a 830 SMART SM00357 90 152 1.1E-11 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 M892_12185 0c0cc3da5dc7924e6166b34e3639b28a 830 SUPERFAMILY SSF50249 651 738 5.0E-22 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M892_12185 0c0cc3da5dc7924e6166b34e3639b28a 830 Gene3D G3DSA:2.40.50.140 653 764 4.4E-27 T 12-10-2018 M892_12185 0c0cc3da5dc7924e6166b34e3639b28a 830 Pfam PF08206 Ribonuclease B OB domain 91 151 5.2E-21 T 12-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain M892_12185 0c0cc3da5dc7924e6166b34e3639b28a 830 Pfam PF08461 Ribonuclease R winged-helix domain 27 88 5.3E-13 T 12-10-2018 IPR013668 Ribonuclease R winged-helix domain M892_12185 0c0cc3da5dc7924e6166b34e3639b28a 830 SMART SM00316 650 733 3.8E-14 T 12-10-2018 IPR022967 RNA-binding domain, S1 M892_12185 0c0cc3da5dc7924e6166b34e3639b28a 830 SUPERFAMILY SSF50249 71 154 2.62E-16 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M892_05915 5fc42fcd476987d85a48b01deae8e7ee 215 Gene3D G3DSA:1.10.3210.10 20 215 5.2E-83 T 12-10-2018 M892_05915 5fc42fcd476987d85a48b01deae8e7ee 215 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 101 197 6.0E-47 T 12-10-2018 M892_05915 5fc42fcd476987d85a48b01deae8e7ee 215 SUPERFAMILY SSF109604 25 205 3.71E-43 T 12-10-2018 M892_05915 5fc42fcd476987d85a48b01deae8e7ee 215 SMART SM00471 47 172 6.9E-8 T 12-10-2018 IPR003607 HD/PDEase domain M892_05915 5fc42fcd476987d85a48b01deae8e7ee 215 Hamap MF_01100 5'-deoxynucleotidase YfbR [yfbR]. 24 215 45.585 T 12-10-2018 IPR022971 5'-deoxynucleotidase YfbR KEGG: 00240+3.1.3.89 M892_05915 5fc42fcd476987d85a48b01deae8e7ee 215 Pfam PF13023 HD domain 32 179 3.2E-16 T 12-10-2018 IPR006674 HD domain M892_13505 14167376d686e9172912524ab6e50f40 258 Gene3D G3DSA:3.40.1210.10 2 258 2.3E-96 T 12-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 M892_13505 14167376d686e9172912524ab6e50f40 258 Pfam PF01975 Survival protein SurE 13 191 4.3E-61 T 12-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 M892_13505 14167376d686e9172912524ab6e50f40 258 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 12 242 7.3E-73 T 12-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 M892_13505 14167376d686e9172912524ab6e50f40 258 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 11 257 40.77 T 12-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 M892_13505 14167376d686e9172912524ab6e50f40 258 SUPERFAMILY SSF64167 11 256 5.36E-86 T 12-10-2018 M892_05785 b9791ed38d910a225ba028d76ce5b023 665 Gene3D G3DSA:3.30.70.270 504 660 3.7E-31 T 12-10-2018 M892_05785 b9791ed38d910a225ba028d76ce5b023 665 Gene3D G3DSA:3.40.190.10 115 180 4.1E-7 T 12-10-2018 M892_05785 b9791ed38d910a225ba028d76ce5b023 665 Gene3D G3DSA:3.40.190.10 335 433 7.6E-19 T 12-10-2018 M892_05785 b9791ed38d910a225ba028d76ce5b023 665 SMART SM00062 29 222 8.4E-5 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M892_05785 b9791ed38d910a225ba028d76ce5b023 665 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 509 656 2.7E-27 T 12-10-2018 IPR000160 GGDEF domain M892_05785 b9791ed38d910a225ba028d76ce5b023 665 SMART SM00267 500 661 2.1E-21 T 12-10-2018 IPR000160 GGDEF domain M892_05785 b9791ed38d910a225ba028d76ce5b023 665 SUPERFAMILY SSF53850 255 469 3.01E-22 T 12-10-2018 M892_05785 b9791ed38d910a225ba028d76ce5b023 665 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 259 434 1.1E-18 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M892_05785 b9791ed38d910a225ba028d76ce5b023 665 SUPERFAMILY SSF53850 44 210 9.67E-23 T 12-10-2018 M892_05785 b9791ed38d910a225ba028d76ce5b023 665 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 172 9.9E-18 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M892_05785 b9791ed38d910a225ba028d76ce5b023 665 Gene3D G3DSA:3.40.190.10 258 458 7.6E-19 T 12-10-2018 M892_05785 b9791ed38d910a225ba028d76ce5b023 665 SUPERFAMILY SSF55073 516 657 9.42E-27 T 12-10-2018 IPR029787 Nucleotide cyclase M892_05785 b9791ed38d910a225ba028d76ce5b023 665 Gene3D G3DSA:3.40.190.10 40 114 4.9E-10 T 12-10-2018 M892_05785 b9791ed38d910a225ba028d76ce5b023 665 Pfam PF00990 Diguanylate cyclase, GGDEF domain 512 656 1.2E-25 T 12-10-2018 IPR000160 GGDEF domain M892_03975 529667de8adf4500880b1d50988e74d6 164 SUPERFAMILY SSF50891 1 162 1.04E-58 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily M892_03975 529667de8adf4500880b1d50988e74d6 164 PIRSF PIRSF001467 1 163 6.5E-29 T 12-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 M892_03975 529667de8adf4500880b1d50988e74d6 164 Gene3D G3DSA:2.40.100.10 1 164 2.9E-66 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily M892_03975 529667de8adf4500880b1d50988e74d6 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 8.8E-12 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 M892_03975 529667de8adf4500880b1d50988e74d6 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 8.8E-12 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 M892_03975 529667de8adf4500880b1d50988e74d6 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 8.8E-12 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 M892_03975 529667de8adf4500880b1d50988e74d6 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 2 160 1.9E-48 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 M892_03975 529667de8adf4500880b1d50988e74d6 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 12-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 M892_21365 4dfd933409c5240ed024c8998f872eb6 985 PRINTS PR00344 Bacterial sensor protein C-terminal signature 678 691 6.4E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_21365 4dfd933409c5240ed024c8998f872eb6 985 PRINTS PR00344 Bacterial sensor protein C-terminal signature 638 648 6.4E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_21365 4dfd933409c5240ed024c8998f872eb6 985 PRINTS PR00344 Bacterial sensor protein C-terminal signature 654 672 6.4E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_21365 4dfd933409c5240ed024c8998f872eb6 985 PRINTS PR00344 Bacterial sensor protein C-terminal signature 620 634 6.4E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_21365 4dfd933409c5240ed024c8998f872eb6 985 Gene3D G3DSA:1.20.58.920 178 322 8.0E-52 T 12-10-2018 IPR038188 TorS, sensor domain superfamily M892_21365 4dfd933409c5240ed024c8998f872eb6 985 Gene3D G3DSA:1.20.58.920 47 177 1.9E-47 T 12-10-2018 IPR038188 TorS, sensor domain superfamily M892_21365 4dfd933409c5240ed024c8998f872eb6 985 Gene3D G3DSA:1.20.120.160 870 985 5.9E-21 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 M892_21365 4dfd933409c5240ed024c8998f872eb6 985 Gene3D G3DSA:1.10.287.130 404 532 2.8E-26 T 12-10-2018 M892_21365 4dfd933409c5240ed024c8998f872eb6 985 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 581 693 2.7E-29 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_21365 4dfd933409c5240ed024c8998f872eb6 985 SMART SM00073 886 983 1.4E-5 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 M892_21365 4dfd933409c5240ed024c8998f872eb6 985 SUPERFAMILY SSF47226 875 983 2.09E-21 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 M892_21365 4dfd933409c5240ed024c8998f872eb6 985 Pfam PF01627 Hpt domain 898 973 3.0E-13 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 M892_21365 4dfd933409c5240ed024c8998f872eb6 985 Gene3D G3DSA:3.40.50.2300 708 855 4.4E-32 T 12-10-2018 M892_21365 4dfd933409c5240ed024c8998f872eb6 985 SUPERFAMILY SSF52172 712 850 3.7E-32 T 12-10-2018 IPR011006 CheY-like superfamily M892_21365 4dfd933409c5240ed024c8998f872eb6 985 Pfam PF00072 Response regulator receiver domain 714 832 5.8E-20 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_21365 4dfd933409c5240ed024c8998f872eb6 985 TIGRFAM TIGR02956 TMAO_torS: TMAO reductase sytem sensor TorS 7 981 0.0 T 12-10-2018 IPR014302 Signal transduction histidine kinase, TMAO sensor TorS GO:0000155|GO:0000160|GO:0004673|GO:0016021 M892_21365 4dfd933409c5240ed024c8998f872eb6 985 SMART SM00387 581 694 5.0E-38 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_21365 4dfd933409c5240ed024c8998f872eb6 985 Gene3D G3DSA:3.30.565.10 533 697 6.8E-50 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_21365 4dfd933409c5240ed024c8998f872eb6 985 SMART SM00448 712 832 5.3E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_21365 4dfd933409c5240ed024c8998f872eb6 985 SMART SM00388 469 534 1.2E-22 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M892_21365 4dfd933409c5240ed024c8998f872eb6 985 SUPERFAMILY SSF55874 523 697 2.88E-44 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_21365 4dfd933409c5240ed024c8998f872eb6 985 Pfam PF00512 His Kinase A (phospho-acceptor) domain 469 534 6.5E-19 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M892_21365 4dfd933409c5240ed024c8998f872eb6 985 SUPERFAMILY SSF47384 457 535 4.9E-20 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M892_21365 4dfd933409c5240ed024c8998f872eb6 985 PIRSF PIRSF036437 1 985 0.0 T 12-10-2018 IPR014302 Signal transduction histidine kinase, TMAO sensor TorS GO:0000155|GO:0000160|GO:0004673|GO:0016021 M892_08370 8f58f6bc4462e8b04a8e00c5673185f2 261 Pfam PF08478 POTRA domain, FtsQ-type 54 123 7.7E-17 T 12-10-2018 IPR013685 POTRA domain, FtsQ-type M892_08370 8f58f6bc4462e8b04a8e00c5673185f2 261 Gene3D G3DSA:3.40.50.11690 124 252 6.0E-37 T 12-10-2018 M892_08370 8f58f6bc4462e8b04a8e00c5673185f2 261 Pfam PF03799 Cell division protein FtsQ 127 239 3.4E-23 T 12-10-2018 IPR005548 Cell division protein FtsQ/DivIB M892_08370 8f58f6bc4462e8b04a8e00c5673185f2 261 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 23 247 22.599 T 12-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 M892_08370 8f58f6bc4462e8b04a8e00c5673185f2 261 Gene3D G3DSA:3.10.20.310 52 123 3.0E-24 T 12-10-2018 M892_09455 1da27c774b588ce23352ca94dec99f0c 421 Gene3D G3DSA:3.40.50.2000 216 405 9.5E-61 T 12-10-2018 M892_09455 1da27c774b588ce23352ca94dec99f0c 421 Gene3D G3DSA:3.40.50.11720 33 210 1.3E-48 T 12-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 M892_09455 1da27c774b588ce23352ca94dec99f0c 421 Pfam PF00534 Glycosyl transferases group 1 248 396 3.3E-8 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 M892_09455 1da27c774b588ce23352ca94dec99f0c 421 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 34 212 5.3E-61 T 12-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 M892_09455 1da27c774b588ce23352ca94dec99f0c 421 SUPERFAMILY SSF53756 53 397 1.83E-16 T 12-10-2018 M892_22120 29d617e0a509ac39a5375829983b33b9 237 Pfam PF13419 Haloacid dehalogenase-like hydrolase 24 203 2.4E-29 T 12-10-2018 M892_22120 29d617e0a509ac39a5375829983b33b9 237 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 91 204 4.9E-11 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M892_22120 29d617e0a509ac39a5375829983b33b9 237 Gene3D G3DSA:1.10.150.240 36 103 2.6E-42 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 M892_22120 29d617e0a509ac39a5375829983b33b9 237 Gene3D G3DSA:3.40.50.1000 24 208 2.6E-42 T 12-10-2018 IPR023214 HAD superfamily M892_22120 29d617e0a509ac39a5375829983b33b9 237 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 21 32 1.1E-5 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M892_22120 29d617e0a509ac39a5375829983b33b9 237 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 149 165 1.1E-5 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M892_22120 29d617e0a509ac39a5375829983b33b9 237 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 167 187 1.1E-5 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M892_22120 29d617e0a509ac39a5375829983b33b9 237 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 117 130 1.1E-5 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M892_22120 29d617e0a509ac39a5375829983b33b9 237 SUPERFAMILY SSF56784 20 233 3.17E-45 T 12-10-2018 IPR036412 HAD-like superfamily M892_02890 119627971917925c0f483deffb4c0425 642 SUPERFAMILY SSF55186 65 242 4.97E-65 T 12-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 M892_02890 119627971917925c0f483deffb4c0425 642 Gene3D G3DSA:3.30.54.20 131 188 2.6E-64 T 12-10-2018 M892_02890 119627971917925c0f483deffb4c0425 642 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 73 632 2.0E-242 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 M892_02890 119627971917925c0f483deffb4c0425 642 Gene3D G3DSA:3.30.980.10 70 223 2.6E-64 T 12-10-2018 M892_02890 119627971917925c0f483deffb4c0425 642 Gene3D G3DSA:3.40.50.800 533 642 1.6E-31 T 12-10-2018 IPR036621 Anticodon-binding domain superfamily M892_02890 119627971917925c0f483deffb4c0425 642 SMART SM00863 171 220 7.3E-19 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 M892_02890 119627971917925c0f483deffb4c0425 642 SUPERFAMILY SSF55681 244 527 7.76E-100 T 12-10-2018 M892_02890 119627971917925c0f483deffb4c0425 642 Gene3D G3DSA:3.30.930.10 224 532 1.5E-129 T 12-10-2018 M892_02890 119627971917925c0f483deffb4c0425 642 SUPERFAMILY SSF81271 3 61 2.29E-15 T 12-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 M892_02890 119627971917925c0f483deffb4c0425 642 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 319 530 4.3E-50 T 12-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 M892_02890 119627971917925c0f483deffb4c0425 642 Pfam PF03129 Anticodon binding domain 542 631 3.5E-22 T 12-10-2018 IPR004154 Anticodon-binding M892_02890 119627971917925c0f483deffb4c0425 642 Gene3D G3DSA:3.10.20.30 3 62 1.1E-22 T 12-10-2018 IPR012675 Beta-grasp domain superfamily M892_02890 119627971917925c0f483deffb4c0425 642 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 173 220 9.3E-14 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 M892_02890 119627971917925c0f483deffb4c0425 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 363 386 6.8E-54 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 M892_02890 119627971917925c0f483deffb4c0425 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 330 358 6.8E-54 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 M892_02890 119627971917925c0f483deffb4c0425 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 465 493 6.8E-54 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 M892_02890 119627971917925c0f483deffb4c0425 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 535 547 6.8E-54 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 M892_02890 119627971917925c0f483deffb4c0425 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 508 521 6.8E-54 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 M892_02890 119627971917925c0f483deffb4c0425 642 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 67 635 34.302 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 M892_02890 119627971917925c0f483deffb4c0425 642 SUPERFAMILY SSF52954 530 634 7.4E-32 T 12-10-2018 M892_02890 119627971917925c0f483deffb4c0425 642 Pfam PF02824 TGS domain 4 61 9.8E-12 T 12-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 M892_08250 acfac19349c5b100128402fcba145f18 581 SMART SM00267 401 577 7.3E-62 T 12-10-2018 IPR000160 GGDEF domain M892_08250 acfac19349c5b100128402fcba145f18 581 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 408 576 1.5E-49 T 12-10-2018 IPR000160 GGDEF domain M892_08250 acfac19349c5b100128402fcba145f18 581 Gene3D G3DSA:3.30.450.20 263 407 2.4E-22 T 12-10-2018 M892_08250 acfac19349c5b100128402fcba145f18 581 SMART SM00091 279 346 0.0042 T 12-10-2018 IPR000014 PAS domain M892_08250 acfac19349c5b100128402fcba145f18 581 SMART SM00091 158 223 230.0 T 12-10-2018 IPR000014 PAS domain M892_08250 acfac19349c5b100128402fcba145f18 581 SMART SM00091 38 104 46.0 T 12-10-2018 IPR000014 PAS domain M892_08250 acfac19349c5b100128402fcba145f18 581 SUPERFAMILY SSF55073 417 577 5.34E-46 T 12-10-2018 IPR029787 Nucleotide cyclase M892_08250 acfac19349c5b100128402fcba145f18 581 Pfam PF08448 PAS fold 285 395 3.4E-13 T 12-10-2018 IPR013656 PAS fold-4 M892_08250 acfac19349c5b100128402fcba145f18 581 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 276 401 7.4E-13 T 12-10-2018 IPR000014 PAS domain M892_08250 acfac19349c5b100128402fcba145f18 581 Gene3D G3DSA:3.30.450.20 141 259 7.5E-6 T 12-10-2018 M892_08250 acfac19349c5b100128402fcba145f18 581 SUPERFAMILY SSF55785 266 392 9.42E-18 T 12-10-2018 IPR035965 PAS domain superfamily M892_08250 acfac19349c5b100128402fcba145f18 581 Gene3D G3DSA:3.30.70.270 414 580 5.1E-51 T 12-10-2018 M892_08250 acfac19349c5b100128402fcba145f18 581 SUPERFAMILY SSF55785 169 261 7.85E-5 T 12-10-2018 IPR035965 PAS domain superfamily M892_08250 acfac19349c5b100128402fcba145f18 581 Pfam PF00990 Diguanylate cyclase, GGDEF domain 413 572 2.3E-48 T 12-10-2018 IPR000160 GGDEF domain M892_16780 f56981d49deda4e95b2efdabda970596 142 SUPERFAMILY SSF69635 4 128 2.75E-38 T 12-10-2018 M892_16780 f56981d49deda4e95b2efdabda970596 142 Pfam PF05932 Tir chaperone protein (CesT) family 7 112 7.2E-14 T 12-10-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 M892_16780 f56981d49deda4e95b2efdabda970596 142 Gene3D G3DSA:3.30.1460.10 1 136 1.2E-37 T 12-10-2018 M892_10180 ef6908926c2983d90063987f3e733707 695 Gene3D G3DSA:1.10.1370.10 155 625 4.7E-266 T 12-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 M892_10180 ef6908926c2983d90063987f3e733707 695 Pfam PF01432 Peptidase family M3 237 692 6.4E-162 T 12-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 M892_10180 ef6908926c2983d90063987f3e733707 695 SUPERFAMILY SSF55486 16 692 1.47E-209 T 12-10-2018 M892_10180 ef6908926c2983d90063987f3e733707 695 Gene3D G3DSA:1.10.1370.40 28 690 4.7E-266 T 12-10-2018 M892_07940 2398f28697edc65e679a36045d650846 375 Gene3D G3DSA:1.10.3660.10 248 373 2.0E-49 T 12-10-2018 M892_07940 2398f28697edc65e679a36045d650846 375 Pfam PF02153 Prephenate dehydrogenase 138 344 8.1E-32 T 12-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 M892_07940 2398f28697edc65e679a36045d650846 375 Gene3D G3DSA:1.20.59.10 2 80 3.2E-17 T 12-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 M892_07940 2398f28697edc65e679a36045d650846 375 SUPERFAMILY SSF51735 91 237 2.72E-37 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_07940 2398f28697edc65e679a36045d650846 375 SUPERFAMILY SSF48179 241 366 1.93E-41 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 M892_07940 2398f28697edc65e679a36045d650846 375 SMART SM00830 9 89 3.2E-29 T 12-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 M892_07940 2398f28697edc65e679a36045d650846 375 PIRSF PIRSF001499 1 374 1.3E-185 T 12-10-2018 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein GO:0004106|GO:0005737|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 M892_07940 2398f28697edc65e679a36045d650846 375 Pfam PF01817 Chorismate mutase type II 9 87 2.1E-21 T 12-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 M892_07940 2398f28697edc65e679a36045d650846 375 SUPERFAMILY SSF48600 4 88 6.78E-24 T 12-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 M892_07940 2398f28697edc65e679a36045d650846 375 Gene3D G3DSA:3.40.50.720 81 247 2.4E-43 T 12-10-2018 M892_07940 2398f28697edc65e679a36045d650846 375 TIGRFAM TIGR01799 CM_T: chorismate mutase 5 87 3.9E-42 T 12-10-2018 IPR011277 Chorismate mutase, T-protein GO:0004106|GO:0005737|GO:0006571|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 M892_06655 f10450a56de2f54f10262950b48cbabc 475 Gene3D G3DSA:3.40.50.620 2 317 8.9E-135 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M892_06655 f10450a56de2f54f10262950b48cbabc 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 182 192 1.4E-27 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 M892_06655 f10450a56de2f54f10262950b48cbabc 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 1.4E-27 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 M892_06655 f10450a56de2f54f10262950b48cbabc 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 1.4E-27 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 M892_06655 f10450a56de2f54f10262950b48cbabc 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 1.4E-27 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 M892_06655 f10450a56de2f54f10262950b48cbabc 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 198 206 1.4E-27 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 M892_06655 f10450a56de2f54f10262950b48cbabc 475 Gene3D G3DSA:1.10.10.350 369 473 5.7E-24 T 12-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 M892_06655 f10450a56de2f54f10262950b48cbabc 475 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 465 32.114 T 12-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 M892_06655 f10450a56de2f54f10262950b48cbabc 475 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 M892_06655 f10450a56de2f54f10262950b48cbabc 475 SUPERFAMILY SSF48163 302 465 3.66E-45 T 12-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 M892_06655 f10450a56de2f54f10262950b48cbabc 475 SUPERFAMILY SSF52374 3 301 1.26E-109 T 12-10-2018 M892_06655 f10450a56de2f54f10262950b48cbabc 475 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 308 4.6E-116 T 12-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 M892_06655 f10450a56de2f54f10262950b48cbabc 475 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 469 1.4E-195 T 12-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 M892_28450 0e1f8230135d01716c1bafc85fe859a0 338 TIGRFAM TIGR02788 VirB11: P-type DNA transfer ATPase VirB11 22 323 3.8E-101 T 12-10-2018 IPR014155 Type IV secretion system protein VirB11 GO:0043684|GO:0044097 M892_28450 0e1f8230135d01716c1bafc85fe859a0 338 Pfam PF00437 Type II/IV secretion system protein 20 313 2.2E-52 T 12-10-2018 IPR001482 Type II/IV secretion system protein M892_28450 0e1f8230135d01716c1bafc85fe859a0 338 SUPERFAMILY SSF52540 10 316 6.86E-41 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_28450 0e1f8230135d01716c1bafc85fe859a0 338 Gene3D G3DSA:3.30.450.90 13 120 2.2E-30 T 12-10-2018 M892_28450 0e1f8230135d01716c1bafc85fe859a0 338 Gene3D G3DSA:3.40.50.300 121 337 2.3E-62 T 12-10-2018 M892_12610 00ddd84a7b6aa6a8706ab3138937c155 259 PIRSF PIRSF000857 6 253 8.5E-56 T 12-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 M892_12610 00ddd84a7b6aa6a8706ab3138937c155 259 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 14 248 39.149 T 12-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 M892_12610 00ddd84a7b6aa6a8706ab3138937c155 259 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 38 248 3.0E-85 T 12-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 M892_12610 00ddd84a7b6aa6a8706ab3138937c155 259 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 53 224 1.4E-48 T 12-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 M892_12610 00ddd84a7b6aa6a8706ab3138937c155 259 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 26 247 2.8E-89 T 12-10-2018 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8 M892_12610 00ddd84a7b6aa6a8706ab3138937c155 259 Gene3D G3DSA:3.40.50.620 8 221 2.5E-65 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M892_12610 00ddd84a7b6aa6a8706ab3138937c155 259 SUPERFAMILY SSF52402 26 213 2.14E-55 T 12-10-2018 M892_07955 823945e2463dc24de1f2e9ccef1e4ffe 375 Gene3D G3DSA:3.30.420.40 151 334 2.6E-134 T 12-10-2018 M892_07955 823945e2463dc24de1f2e9ccef1e4ffe 375 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 10 374 42.113 T 12-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 M892_07955 823945e2463dc24de1f2e9ccef1e4ffe 375 Gene3D G3DSA:3.30.420.40 17 369 2.6E-134 T 12-10-2018 M892_07955 823945e2463dc24de1f2e9ccef1e4ffe 375 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 11 374 1.0E-168 T 12-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 M892_07955 823945e2463dc24de1f2e9ccef1e4ffe 375 SUPERFAMILY SSF53067 11 348 4.83E-27 T 12-10-2018 M892_10515 e0993e24c521d958a74c7ea05095c6e1 145 Pfam PF00011 Hsp20/alpha crystallin family 43 136 2.1E-19 T 12-10-2018 IPR002068 Alpha crystallin/Hsp20 domain M892_10515 e0993e24c521d958a74c7ea05095c6e1 145 SUPERFAMILY SSF49764 6 137 1.01E-23 T 12-10-2018 IPR008978 HSP20-like chaperone M892_10515 e0993e24c521d958a74c7ea05095c6e1 145 Gene3D G3DSA:2.60.40.790 34 137 1.4E-22 T 12-10-2018 IPR008978 HSP20-like chaperone M892_15970 42e58b5699ce951cb450359fe2975a36 287 SUPERFAMILY SSF88659 186 278 5.42E-14 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like M892_15970 42e58b5699ce951cb450359fe2975a36 287 Pfam PF04539 Sigma-70 region 3 134 197 6.3E-8 T 12-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 M892_15970 42e58b5699ce951cb450359fe2975a36 287 Gene3D G3DSA:1.10.10.10 127 199 2.5E-10 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_15970 42e58b5699ce951cb450359fe2975a36 287 Gene3D G3DSA:1.10.601.10 2 123 3.6E-49 T 12-10-2018 M892_15970 42e58b5699ce951cb450359fe2975a36 287 Pfam PF04545 Sigma-70, region 4 221 273 3.4E-8 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 M892_15970 42e58b5699ce951cb450359fe2975a36 287 SUPERFAMILY SSF88659 127 196 1.74E-6 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like M892_15970 42e58b5699ce951cb450359fe2975a36 287 Pfam PF00140 Sigma-70 factor, region 1.2 20 47 9.4E-10 T 12-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 M892_15970 42e58b5699ce951cb450359fe2975a36 287 SUPERFAMILY SSF88946 20 124 2.09E-43 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 M892_15970 42e58b5699ce951cb450359fe2975a36 287 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 78 91 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 M892_15970 42e58b5699ce951cb450359fe2975a36 287 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 49 274 3.6E-34 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 M892_15970 42e58b5699ce951cb450359fe2975a36 287 PRINTS PR00046 Major sigma-70 factor signature 102 110 2.6E-17 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 M892_15970 42e58b5699ce951cb450359fe2975a36 287 PRINTS PR00046 Major sigma-70 factor signature 225 237 2.6E-17 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 M892_15970 42e58b5699ce951cb450359fe2975a36 287 PRINTS PR00046 Major sigma-70 factor signature 261 272 2.6E-17 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 M892_15970 42e58b5699ce951cb450359fe2975a36 287 PRINTS PR00046 Major sigma-70 factor signature 246 261 2.6E-17 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 M892_15970 42e58b5699ce951cb450359fe2975a36 287 PRINTS PR00046 Major sigma-70 factor signature 78 91 2.6E-17 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 M892_15970 42e58b5699ce951cb450359fe2975a36 287 Pfam PF04542 Sigma-70 region 2 54 123 5.2E-20 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 M892_15970 42e58b5699ce951cb450359fe2975a36 287 Gene3D G3DSA:1.10.10.10 205 279 3.0E-12 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_08850 85b8837b54917a5fa547ecaf99bb9531 161 Pfam PF12821 Threonine/Serine exporter, ThrE 17 151 4.2E-38 T 12-10-2018 IPR024528 Threonine/Serine exporter, ThrE M892_08335 42c2e4ca7ce52f98360a317d3c068a86 269 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 2 125 7.7E-40 T 12-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 M892_08335 42c2e4ca7ce52f98360a317d3c068a86 269 SUPERFAMILY SSF51735 1 268 6.59E-51 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_08335 42c2e4ca7ce52f98360a317d3c068a86 269 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 150 167 - T 12-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 M892_08335 42c2e4ca7ce52f98360a317d3c068a86 269 Gene3D G3DSA:3.30.360.10 127 234 6.5E-101 T 12-10-2018 M892_08335 42c2e4ca7ce52f98360a317d3c068a86 269 Gene3D G3DSA:3.40.50.720 3 264 6.5E-101 T 12-10-2018 M892_08335 42c2e4ca7ce52f98360a317d3c068a86 269 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 1 265 9.0E-98 T 12-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 M892_08335 42c2e4ca7ce52f98360a317d3c068a86 269 SUPERFAMILY SSF55347 127 236 1.46E-37 T 12-10-2018 M892_08335 42c2e4ca7ce52f98360a317d3c068a86 269 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 2 265 35.593 T 12-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 M892_08335 42c2e4ca7ce52f98360a317d3c068a86 269 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 128 264 7.6E-44 T 12-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 M892_08335 42c2e4ca7ce52f98360a317d3c068a86 269 PIRSF PIRSF000161 1 268 8.1E-89 T 12-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 M892_19465 b1d826239b03f2a580e37a146b53c734 154 Gene3D G3DSA:1.25.40.20 13 154 2.3E-25 T 12-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily M892_19465 b1d826239b03f2a580e37a146b53c734 154 SMART SM00248 99 128 1200.0 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 M892_19465 b1d826239b03f2a580e37a146b53c734 154 SMART SM00248 33 62 240.0 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 M892_19465 b1d826239b03f2a580e37a146b53c734 154 SMART SM00248 66 95 0.0012 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 M892_19465 b1d826239b03f2a580e37a146b53c734 154 SUPERFAMILY SSF48403 32 152 3.11E-26 T 12-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily M892_19465 b1d826239b03f2a580e37a146b53c734 154 Pfam PF12796 Ankyrin repeats (3 copies) 40 120 6.1E-12 T 12-10-2018 IPR020683 Ankyrin repeat-containing domain M892_15470 bdc8fec684474bf679f098c673a0668e 154 PIRSF PIRSF000709 1 89 7.9E-5 T 12-10-2018 M892_15470 bdc8fec684474bf679f098c673a0668e 154 PIRSF PIRSF000709 92 147 34.0 T 12-10-2018 M892_15470 bdc8fec684474bf679f098c673a0668e 154 SUPERFAMILY SSF53254 1 144 2.57E-22 T 12-10-2018 IPR029033 Histidine phosphatase superfamily M892_15470 bdc8fec684474bf679f098c673a0668e 154 Gene3D G3DSA:3.40.50.1240 1 154 4.5E-36 T 12-10-2018 IPR029033 Histidine phosphatase superfamily M892_15470 bdc8fec684474bf679f098c673a0668e 154 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 154 4.4E-38 T 12-10-2018 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0101006 M892_15470 bdc8fec684474bf679f098c673a0668e 154 SMART SM00855 2 116 1.6E-5 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 M892_15470 bdc8fec684474bf679f098c673a0668e 154 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 78 3.0E-10 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 M892_14860 ff82ef6eea5da25f9f87f67c556c4518 345 Pfam PF12069 Protein of unknown function (DUF3549) 3 340 1.5E-134 T 12-10-2018 IPR021936 Protein of unknown function DUF3549 M892_09210 b31e1053967a7de8f847d99ce8f56d74 100 Pfam PF00276 Ribosomal protein L23 9 95 1.7E-31 T 12-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 M892_09210 b31e1053967a7de8f847d99ce8f56d74 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 22.535 T 12-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 M892_09210 b31e1053967a7de8f847d99ce8f56d74 100 ProSitePatterns PS00050 Ribosomal protein L23 signature. 81 96 - T 12-10-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_09210 b31e1053967a7de8f847d99ce8f56d74 100 Gene3D G3DSA:3.30.70.330 1 100 5.0E-38 T 12-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily M892_09210 b31e1053967a7de8f847d99ce8f56d74 100 SUPERFAMILY SSF54189 6 97 2.88E-32 T 12-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_08575 4979d38f3b81934c5dd270c1300e2518 203 PIRSF PIRSF006158 1 203 2.8E-70 T 12-10-2018 IPR016476 SH3 domain protein M892_08575 4979d38f3b81934c5dd270c1300e2518 203 Gene3D G3DSA:2.30.30.40 31 86 7.4E-10 T 12-10-2018 M892_08575 4979d38f3b81934c5dd270c1300e2518 203 SMART SM00287 20 86 1.2E-9 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type M892_08575 4979d38f3b81934c5dd270c1300e2518 203 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 24 202 1.4E-53 T 12-10-2018 IPR016476 SH3 domain protein M892_08575 4979d38f3b81934c5dd270c1300e2518 203 Pfam PF08239 Bacterial SH3 domain 33 82 1.2E-8 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type M892_05825 93efe42e2c7453fbd8bdba904cf28b81 191 Pfam PF13505 Outer membrane protein beta-barrel domain 6 191 1.2E-21 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel M892_05825 93efe42e2c7453fbd8bdba904cf28b81 191 Gene3D G3DSA:2.40.160.20 12 190 6.0E-10 T 12-10-2018 M892_05825 93efe42e2c7453fbd8bdba904cf28b81 191 SUPERFAMILY SSF56925 32 191 1.57E-13 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel M892_09860 984b6fb5087ee3dfd6d732325a8d0635 300 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 164 297 6.1E-45 T 12-10-2018 IPR012660 Thioesterase, putative M892_09860 984b6fb5087ee3dfd6d732325a8d0635 300 SUPERFAMILY SSF55729 2 155 1.36E-28 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_09860 984b6fb5087ee3dfd6d732325a8d0635 300 Gene3D G3DSA:3.10.129.10 147 298 2.3E-47 T 12-10-2018 M892_09860 984b6fb5087ee3dfd6d732325a8d0635 300 Gene3D G3DSA:3.40.630.30 3 145 8.7E-28 T 12-10-2018 M892_09860 984b6fb5087ee3dfd6d732325a8d0635 300 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 157 296 4.2E-52 T 12-10-2018 IPR012660 Thioesterase, putative M892_09860 984b6fb5087ee3dfd6d732325a8d0635 300 SUPERFAMILY SSF54637 154 296 7.84E-40 T 12-10-2018 IPR029069 HotDog domain superfamily M892_09860 984b6fb5087ee3dfd6d732325a8d0635 300 Pfam PF13673 Acetyltransferase (GNAT) domain 63 144 1.8E-11 T 12-10-2018 IPR000182 GNAT domain M892_24075 920b67b5141da845d0a1a15a7eddc171 389 Gene3D G3DSA:2.40.110.10 128 240 1.2E-44 T 12-10-2018 M892_24075 920b67b5141da845d0a1a15a7eddc171 389 Gene3D G3DSA:1.20.140.10 241 385 5.5E-47 T 12-10-2018 M892_24075 920b67b5141da845d0a1a15a7eddc171 389 SUPERFAMILY SSF56645 5 249 1.26E-84 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 M892_24075 920b67b5141da845d0a1a15a7eddc171 389 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 129 224 1.2E-24 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 M892_24075 920b67b5141da845d0a1a15a7eddc171 389 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 131 143 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 M892_24075 920b67b5141da845d0a1a15a7eddc171 389 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 343 362 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 M892_24075 920b67b5141da845d0a1a15a7eddc171 389 PIRSF PIRSF016578 14 102 0.77 T 12-10-2018 M892_24075 920b67b5141da845d0a1a15a7eddc171 389 PIRSF PIRSF016578 136 389 1.3E-11 T 12-10-2018 M892_24075 920b67b5141da845d0a1a15a7eddc171 389 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 236 384 1.1E-43 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 M892_24075 920b67b5141da845d0a1a15a7eddc171 389 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 15 124 2.4E-36 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 M892_24075 920b67b5141da845d0a1a15a7eddc171 389 SUPERFAMILY SSF47203 234 386 1.93E-47 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 M892_24075 920b67b5141da845d0a1a15a7eddc171 389 Gene3D G3DSA:1.10.540.10 2 127 4.3E-46 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 M892_00185 e67a893d62117e4719b234a2bf4f0556 82 Pfam PF06945 Protein of unknown function (DUF1289) 11 56 7.4E-18 T 12-10-2018 IPR010710 Protein of unknown function DUF1289 M892_02450 ef32a92d7e5490b528d79067630bdc42 376 Pfam PF04209 homogentisate 1,2-dioxygenase 52 374 3.8E-22 T 12-10-2018 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 M892_02450 ef32a92d7e5490b528d79067630bdc42 376 Gene3D G3DSA:2.60.120.10 65 167 2.6E-12 T 12-10-2018 IPR014710 RmlC-like jelly roll fold M892_02450 ef32a92d7e5490b528d79067630bdc42 376 SUPERFAMILY SSF51182 47 374 1.19E-90 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily M892_11145 7a18d687c09248a6a8cd1fde3d2a0909 276 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 12-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 M892_11145 7a18d687c09248a6a8cd1fde3d2a0909 276 Gene3D G3DSA:3.10.310.10 5 272 1.6E-106 T 12-10-2018 M892_11145 7a18d687c09248a6a8cd1fde3d2a0909 276 Pfam PF01678 Diaminopimelate epimerase 154 269 2.2E-31 T 12-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 M892_11145 7a18d687c09248a6a8cd1fde3d2a0909 276 Pfam PF01678 Diaminopimelate epimerase 5 125 1.6E-33 T 12-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 M892_11145 7a18d687c09248a6a8cd1fde3d2a0909 276 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 274 5.9E-101 T 12-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 M892_11145 7a18d687c09248a6a8cd1fde3d2a0909 276 Gene3D G3DSA:3.10.310.10 117 263 1.6E-106 T 12-10-2018 M892_11145 7a18d687c09248a6a8cd1fde3d2a0909 276 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 276 39.622 T 12-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 M892_11145 7a18d687c09248a6a8cd1fde3d2a0909 276 SUPERFAMILY SSF54506 2 274 1.57E-53 T 12-10-2018 M892_07950 5eb643ff99cd987e54fc4c178cd637c1 327 Gene3D G3DSA:3.20.20.300 1 327 3.3E-126 T 12-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 M892_07950 5eb643ff99cd987e54fc4c178cd637c1 327 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 9 291 1.6E-84 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 M892_07950 5eb643ff99cd987e54fc4c178cd637c1 327 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 3 327 45.255 T 12-10-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 M892_07950 5eb643ff99cd987e54fc4c178cd637c1 327 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 229 246 - T 12-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 M892_07950 5eb643ff99cd987e54fc4c178cd637c1 327 SUPERFAMILY SSF51445 2 287 1.47E-85 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily M892_08415 fb19d8c3756ce9130e947c84f7fd20b8 105 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 23 102 1.2E-24 T 12-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 M892_08415 fb19d8c3756ce9130e947c84f7fd20b8 105 Hamap MF_00910 Cell division protein FtsL [ftsL]. 19 102 15.964 T 12-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 M892_08415 fb19d8c3756ce9130e947c84f7fd20b8 105 Pfam PF04999 Cell division protein FtsL 8 103 8.2E-36 T 12-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 M892_06460 9b4141dd791c7e438a7af846d7f13a7b 461 Gene3D G3DSA:2.40.160.10 35 460 6.8E-16 T 12-10-2018 IPR023614 Porin domain superfamily M892_13685 3333ccf35fe09cb61f2d5f60c84c8761 460 SMART SM00963 1 86 5.3E-37 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 M892_13685 3333ccf35fe09cb61f2d5f60c84c8761 460 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 1.4E-73 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 M892_13685 3333ccf35fe09cb61f2d5f60c84c8761 460 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 M892_13685 3333ccf35fe09cb61f2d5f60c84c8761 460 SMART SM00962 100 296 7.1E-115 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 M892_13685 3333ccf35fe09cb61f2d5f60c84c8761 460 SUPERFAMILY SSF47446 329 430 7.19E-38 T 12-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 M892_13685 3333ccf35fe09cb61f2d5f60c84c8761 460 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 34.251 T 12-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 M892_13685 3333ccf35fe09cb61f2d5f60c84c8761 460 Gene3D G3DSA:3.40.50.300 90 285 4.0E-123 T 12-10-2018 M892_13685 3333ccf35fe09cb61f2d5f60c84c8761 460 SUPERFAMILY SSF52540 42 353 1.38E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_13685 3333ccf35fe09cb61f2d5f60c84c8761 460 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 4.0E-179 T 12-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 M892_13685 3333ccf35fe09cb61f2d5f60c84c8761 460 SMART SM00382 99 247 1.4E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_13685 3333ccf35fe09cb61f2d5f60c84c8761 460 Gene3D G3DSA:1.20.120.140 4 305 4.0E-123 T 12-10-2018 M892_13685 3333ccf35fe09cb61f2d5f60c84c8761 460 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 1.1E-22 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 M892_13685 3333ccf35fe09cb61f2d5f60c84c8761 460 Gene3D G3DSA:1.10.260.30 328 453 9.6E-45 T 12-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 M892_13685 3333ccf35fe09cb61f2d5f60c84c8761 460 Pfam PF02978 Signal peptide binding domain 329 427 3.9E-33 T 12-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 M892_10335 9df217354c4290a943af83b6c5f70ec1 247 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 215 1.4E-21 T 12-10-2018 M892_10335 9df217354c4290a943af83b6c5f70ec1 247 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 96 215 1.6E-8 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M892_10335 9df217354c4290a943af83b6c5f70ec1 247 Gene3D G3DSA:1.20.120.710 21 115 4.2E-59 T 12-10-2018 M892_10335 9df217354c4290a943af83b6c5f70ec1 247 SUPERFAMILY SSF56784 9 243 5.7E-42 T 12-10-2018 IPR036412 HAD-like superfamily M892_10335 9df217354c4290a943af83b6c5f70ec1 247 Gene3D G3DSA:3.40.50.1000 9 238 4.2E-59 T 12-10-2018 IPR023214 HAD superfamily M892_10335 9df217354c4290a943af83b6c5f70ec1 247 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 117 209 1.0E-10 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M892_26920 f9cd19464909f3b0b3479987b707ab94 289 SUPERFAMILY SSF53613 2 275 3.59E-69 T 12-10-2018 IPR029056 Ribokinase-like M892_26920 f9cd19464909f3b0b3479987b707ab94 289 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 1 284 1.8E-101 T 12-10-2018 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-6798695|Reactome: R-HSA-964975 M892_26920 f9cd19464909f3b0b3479987b707ab94 289 Hamap MF_01639 Pyridoxal kinase PdxY [pdxY]. 1 284 52.808 T 12-10-2018 IPR023685 Pyridoxal kinase PdxY GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282 M892_26920 f9cd19464909f3b0b3479987b707ab94 289 Gene3D G3DSA:3.40.1190.20 1 288 4.3E-86 T 12-10-2018 IPR029056 Ribokinase-like M892_26920 f9cd19464909f3b0b3479987b707ab94 289 Pfam PF08543 Phosphomethylpyrimidine kinase 75 260 3.6E-21 T 12-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 M892_14430 51aa749907d66f214b9e473b1e4b0e41 648 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 21 621 4.0E-226 T 12-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 M892_14430 51aa749907d66f214b9e473b1e4b0e41 648 SUPERFAMILY SSF56601 255 621 7.97E-92 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like M892_14430 51aa749907d66f214b9e473b1e4b0e41 648 Gene3D G3DSA:3.90.1310.10 65 249 2.3E-50 T 12-10-2018 M892_14430 51aa749907d66f214b9e473b1e4b0e41 648 Pfam PF03717 Penicillin-binding Protein dimerisation domain 65 240 1.6E-47 T 12-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 M892_14430 51aa749907d66f214b9e473b1e4b0e41 648 Pfam PF00905 Penicillin binding protein transpeptidase domain 272 617 3.2E-71 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 M892_14430 51aa749907d66f214b9e473b1e4b0e41 648 Hamap MF_02081 Peptidoglycan D,D-transpeptidase MrdA [mrdA]. 4 625 49.242 T 12-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 M892_14430 51aa749907d66f214b9e473b1e4b0e41 648 Gene3D G3DSA:3.40.710.10 250 631 3.0E-90 T 12-10-2018 M892_14430 51aa749907d66f214b9e473b1e4b0e41 648 Gene3D G3DSA:3.30.1390.30 86 161 2.3E-50 T 12-10-2018 M892_14430 51aa749907d66f214b9e473b1e4b0e41 648 SUPERFAMILY SSF56519 57 253 5.36E-55 T 12-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 M892_09705 d2562709c8b39bb8423c3a3ce0096555 693 Gene3D G3DSA:3.40.50.300 208 450 4.3E-83 T 12-10-2018 M892_09705 d2562709c8b39bb8423c3a3ce0096555 693 SUPERFAMILY SSF52540 292 653 2.55E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_09705 d2562709c8b39bb8423c3a3ce0096555 693 SUPERFAMILY SSF50249 9 174 2.23E-41 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M892_09705 d2562709c8b39bb8423c3a3ce0096555 693 SMART SM00490 505 589 1.2E-21 T 12-10-2018 IPR001650 Helicase, C-terminal M892_09705 d2562709c8b39bb8423c3a3ce0096555 693 Pfam PF00271 Helicase conserved C-terminal domain 480 588 5.9E-17 T 12-10-2018 IPR001650 Helicase, C-terminal M892_09705 d2562709c8b39bb8423c3a3ce0096555 693 Pfam PF17191 RecG wedge domain 14 172 2.0E-21 T 12-10-2018 IPR033454 RecG, wedge domain M892_09705 d2562709c8b39bb8423c3a3ce0096555 693 Pfam PF00270 DEAD/DEAH box helicase 271 433 2.4E-19 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 M892_09705 d2562709c8b39bb8423c3a3ce0096555 693 Gene3D G3DSA:2.40.50.140 47 140 2.1E-13 T 12-10-2018 M892_09705 d2562709c8b39bb8423c3a3ce0096555 693 SUPERFAMILY SSF52540 195 453 5.75E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_09705 d2562709c8b39bb8423c3a3ce0096555 693 Gene3D G3DSA:1.10.150.20 3 41 5.5E-5 T 12-10-2018 M892_09705 d2562709c8b39bb8423c3a3ce0096555 693 SMART SM00487 265 459 7.0E-31 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain M892_09705 d2562709c8b39bb8423c3a3ce0096555 693 Gene3D G3DSA:3.40.50.300 457 630 9.1E-53 T 12-10-2018 M892_09705 d2562709c8b39bb8423c3a3ce0096555 693 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 29 664 2.4E-238 T 12-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 M892_09430 30767e3383f32b09305dd800d840b917 253 Pfam PF06251 Capsule biosynthesis GfcC 34 246 1.1E-19 T 12-10-2018 IPR010425 Domain of unknown function DUF1017 M892_08790 7cb30ade7eddde5281c448082fe9e677 363 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 6 360 51.24 T 12-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 M892_08790 7cb30ade7eddde5281c448082fe9e677 363 SMART SM01329 7 356 1.2E-203 T 12-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 M892_08790 7cb30ade7eddde5281c448082fe9e677 363 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 7 355 2.1E-164 T 12-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 M892_08790 7cb30ade7eddde5281c448082fe9e677 363 SUPERFAMILY SSF53659 4 361 2.69E-123 T 12-10-2018 M892_08790 7cb30ade7eddde5281c448082fe9e677 363 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 7 356 6.6E-136 T 12-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 M892_08790 7cb30ade7eddde5281c448082fe9e677 363 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 248 267 - T 12-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 M892_08790 7cb30ade7eddde5281c448082fe9e677 363 Gene3D G3DSA:3.40.718.10 1 363 7.1E-157 T 12-10-2018 M892_07705 a26b8ec41dcfc5b40cf888a76f711c80 301 Gene3D G3DSA:1.10.10.10 2 89 6.8E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_07705 a26b8ec41dcfc5b40cf888a76f711c80 301 SUPERFAMILY SSF53850 95 300 6.97E-35 T 12-10-2018 M892_07705 a26b8ec41dcfc5b40cf888a76f711c80 301 Pfam PF03466 LysR substrate binding domain 96 299 1.6E-37 T 12-10-2018 IPR005119 LysR, substrate-binding M892_07705 a26b8ec41dcfc5b40cf888a76f711c80 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 68 4.8E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_07705 a26b8ec41dcfc5b40cf888a76f711c80 301 Gene3D G3DSA:3.40.190.10 168 269 3.6E-54 T 12-10-2018 M892_07705 a26b8ec41dcfc5b40cf888a76f711c80 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 7.3E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_07705 a26b8ec41dcfc5b40cf888a76f711c80 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 7.3E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_07705 a26b8ec41dcfc5b40cf888a76f711c80 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 7.3E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_07705 a26b8ec41dcfc5b40cf888a76f711c80 301 SUPERFAMILY SSF46785 4 117 4.51E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_07705 a26b8ec41dcfc5b40cf888a76f711c80 301 Gene3D G3DSA:3.40.190.10 98 298 3.6E-54 T 12-10-2018 M892_21025 0c70c09327d9120ee9e4d588158b00f3 456 Pfam PF00263 Bacterial type II and III secretion system protein 250 407 6.2E-39 T 12-10-2018 IPR004846 Type II/III secretion system GO:0009306 M892_21025 0c70c09327d9120ee9e4d588158b00f3 456 Pfam PF13629 Pilus formation protein N terminal region 35 99 6.7E-13 T 12-10-2018 IPR032789 Pilus formation protein, N-terminal M892_21025 0c70c09327d9120ee9e4d588158b00f3 456 Pfam PF04972 BON domain 104 156 2.9E-6 T 12-10-2018 IPR007055 BON domain M892_06895 b6c6a4f69c1417edbf9c1275efd806f3 392 SUPERFAMILY SSF56601 11 283 7.02E-85 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like M892_06895 b6c6a4f69c1417edbf9c1275efd806f3 392 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 283 372 4.3E-29 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 M892_06895 b6c6a4f69c1417edbf9c1275efd806f3 392 Gene3D G3DSA:3.40.710.10 27 282 9.5E-91 T 12-10-2018 M892_06895 b6c6a4f69c1417edbf9c1275efd806f3 392 Gene3D G3DSA:2.60.410.10 283 373 4.7E-31 T 12-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 M892_06895 b6c6a4f69c1417edbf9c1275efd806f3 392 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 33 263 1.4E-95 T 12-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 M892_06895 b6c6a4f69c1417edbf9c1275efd806f3 392 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 122 139 2.6E-17 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 M892_06895 b6c6a4f69c1417edbf9c1275efd806f3 392 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 149 162 2.6E-17 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 M892_06895 b6c6a4f69c1417edbf9c1275efd806f3 392 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 66 77 2.6E-17 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 M892_06895 b6c6a4f69c1417edbf9c1275efd806f3 392 SMART SM00936 283 373 1.2E-38 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 M892_06895 b6c6a4f69c1417edbf9c1275efd806f3 392 SUPERFAMILY SSF69189 283 375 2.16E-28 T 12-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 M892_27355 9e53eb42898c5a27cf229c1f7fc31870 853 Gene3D G3DSA:2.60.40.10 552 662 7.8E-9 T 12-10-2018 IPR013783 Immunoglobulin-like fold M892_27355 9e53eb42898c5a27cf229c1f7fc31870 853 SUPERFAMILY SSF49373 557 648 1.16E-9 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments M892_27355 9e53eb42898c5a27cf229c1f7fc31870 853 SUPERFAMILY SSF49373 467 552 1.02E-7 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments M892_27355 9e53eb42898c5a27cf229c1f7fc31870 853 Gene3D G3DSA:2.60.40.10 460 551 5.6E-7 T 12-10-2018 IPR013783 Immunoglobulin-like fold M892_01070 4af8b50b789114e709f7ebf1a14c9940 490 Pfam PF03440 Aerolysin/Pertussis toxin (APT) domain 25 100 4.4E-17 T 12-10-2018 IPR005138 Aerolysin/Pertussis toxin domain M892_01070 4af8b50b789114e709f7ebf1a14c9940 490 SUPERFAMILY SSF56973 108 455 1.31E-95 T 12-10-2018 M892_01070 4af8b50b789114e709f7ebf1a14c9940 490 PRINTS PR00754 Aerolysin signature 379 398 4.7E-74 T 12-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 M892_01070 4af8b50b789114e709f7ebf1a14c9940 490 PRINTS PR00754 Aerolysin signature 262 286 4.7E-74 T 12-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 M892_01070 4af8b50b789114e709f7ebf1a14c9940 490 PRINTS PR00754 Aerolysin signature 401 419 4.7E-74 T 12-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 M892_01070 4af8b50b789114e709f7ebf1a14c9940 490 PRINTS PR00754 Aerolysin signature 63 82 4.7E-74 T 12-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 M892_01070 4af8b50b789114e709f7ebf1a14c9940 490 PRINTS PR00754 Aerolysin signature 138 160 4.7E-74 T 12-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 M892_01070 4af8b50b789114e709f7ebf1a14c9940 490 PRINTS PR00754 Aerolysin signature 334 357 4.7E-74 T 12-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 M892_01070 4af8b50b789114e709f7ebf1a14c9940 490 PRINTS PR00754 Aerolysin signature 44 62 4.7E-74 T 12-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 M892_01070 4af8b50b789114e709f7ebf1a14c9940 490 PRINTS PR00754 Aerolysin signature 420 439 4.7E-74 T 12-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 M892_01070 4af8b50b789114e709f7ebf1a14c9940 490 SMART SM00999 117 476 5.8E-281 T 12-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 M892_01070 4af8b50b789114e709f7ebf1a14c9940 490 Gene3D G3DSA:2.170.15.10 198 442 2.2E-140 T 12-10-2018 M892_01070 4af8b50b789114e709f7ebf1a14c9940 490 Gene3D G3DSA:3.30.412.10 120 417 2.2E-140 T 12-10-2018 M892_01070 4af8b50b789114e709f7ebf1a14c9940 490 Gene3D G3DSA:3.10.40.10 22 111 1.6E-35 T 12-10-2018 IPR037015 Aerolysin/Pertussis toxin (APT), N-terminal domain superfamily M892_01070 4af8b50b789114e709f7ebf1a14c9940 490 SUPERFAMILY SSF56436 24 105 8.79E-33 T 12-10-2018 IPR016187 C-type lectin fold M892_01070 4af8b50b789114e709f7ebf1a14c9940 490 Pfam PF01117 Aerolysin toxin 120 475 2.3E-120 T 12-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 M892_08895 077711d03c0050bada1b5a44f0618de8 156 SUPERFAMILY SSF55252 82 151 3.92E-19 T 12-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 M892_08895 077711d03c0050bada1b5a44f0618de8 156 TIGRFAM TIGR01529 argR_whole: arginine repressor 10 151 5.4E-44 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 M892_08895 077711d03c0050bada1b5a44f0618de8 156 Hamap MF_00173 Arginine repressor [argR]. 1 155 59.828 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 M892_08895 077711d03c0050bada1b5a44f0618de8 156 SUPERFAMILY SSF46785 3 77 3.36E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_08895 077711d03c0050bada1b5a44f0618de8 156 Gene3D G3DSA:3.30.1360.40 75 156 5.6E-34 T 12-10-2018 M892_08895 077711d03c0050bada1b5a44f0618de8 156 PRINTS PR01467 Bacterial arginine repressor signature 25 38 1.7E-24 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 M892_08895 077711d03c0050bada1b5a44f0618de8 156 PRINTS PR01467 Bacterial arginine repressor signature 42 57 1.7E-24 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 M892_08895 077711d03c0050bada1b5a44f0618de8 156 PRINTS PR01467 Bacterial arginine repressor signature 121 136 1.7E-24 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 M892_08895 077711d03c0050bada1b5a44f0618de8 156 PRINTS PR01467 Bacterial arginine repressor signature 90 103 1.7E-24 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 M892_08895 077711d03c0050bada1b5a44f0618de8 156 Pfam PF02863 Arginine repressor, C-terminal domain 82 147 8.8E-22 T 12-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 M892_08895 077711d03c0050bada1b5a44f0618de8 156 Gene3D G3DSA:1.10.10.10 1 74 7.9E-35 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_08895 077711d03c0050bada1b5a44f0618de8 156 Pfam PF01316 Arginine repressor, DNA binding domain 6 74 8.6E-24 T 12-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 M892_08895 077711d03c0050bada1b5a44f0618de8 156 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 89 146 2.0E-20 T 12-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 M892_10930 16db32c9cf3568035f6c1862957f35c7 596 Pfam PF00557 Metallopeptidase family M24 309 524 1.8E-43 T 12-10-2018 IPR000994 Peptidase M24 M892_10930 16db32c9cf3568035f6c1862957f35c7 596 Gene3D G3DSA:3.40.350.10 147 292 2.1E-24 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal M892_10930 16db32c9cf3568035f6c1862957f35c7 596 SUPERFAMILY SSF53092 6 131 7.5E-21 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal M892_10930 16db32c9cf3568035f6c1862957f35c7 596 SUPERFAMILY SSF55920 303 559 3.93E-56 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like M892_10930 16db32c9cf3568035f6c1862957f35c7 596 Pfam PF16188 C-terminal region of peptidase_M24 534 592 3.6E-22 T 12-10-2018 IPR032416 Peptidase M24, C-terminal domain M892_10930 16db32c9cf3568035f6c1862957f35c7 596 Pfam PF01321 Creatinase/Prolidase N-terminal domain 8 134 3.9E-20 T 12-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 M892_10930 16db32c9cf3568035f6c1862957f35c7 596 Pfam PF16189 Creatinase/Prolidase N-terminal domain 148 306 2.2E-35 T 12-10-2018 M892_10930 16db32c9cf3568035f6c1862957f35c7 596 Gene3D G3DSA:3.90.230.10 300 593 1.3E-94 T 12-10-2018 M892_10930 16db32c9cf3568035f6c1862957f35c7 596 Gene3D G3DSA:3.40.350.10 1 146 8.5E-36 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal M892_08820 cb595935aa2e0a11782f89aba991aed9 427 Gene3D G3DSA:3.10.50.40 274 415 2.4E-38 T 12-10-2018 M892_08820 cb595935aa2e0a11782f89aba991aed9 427 Gene3D G3DSA:1.10.4030.30 25 271 1.5E-69 T 12-10-2018 M892_08820 cb595935aa2e0a11782f89aba991aed9 427 SUPERFAMILY SSF54534 172 270 8.5E-25 T 12-10-2018 M892_08820 cb595935aa2e0a11782f89aba991aed9 427 Pfam PF13616 PPIC-type PPIASE domain 276 378 2.7E-22 T 12-10-2018 M892_08820 cb595935aa2e0a11782f89aba991aed9 427 Pfam PF13616 PPIC-type PPIASE domain 163 269 1.7E-21 T 12-10-2018 M892_08820 cb595935aa2e0a11782f89aba991aed9 427 Gene3D G3DSA:3.10.50.40 171 270 1.5E-69 T 12-10-2018 M892_08820 cb595935aa2e0a11782f89aba991aed9 427 SUPERFAMILY SSF109998 24 195 3.4E-39 T 12-10-2018 IPR027304 Trigger factor/SurA domain superfamily M892_08820 cb595935aa2e0a11782f89aba991aed9 427 Pfam PF09312 SurA N-terminal domain 24 141 1.5E-43 T 12-10-2018 IPR015391 SurA N-terminal M892_08820 cb595935aa2e0a11782f89aba991aed9 427 SUPERFAMILY SSF54534 278 380 9.16E-29 T 12-10-2018 M892_08820 cb595935aa2e0a11782f89aba991aed9 427 Hamap MF_01183 Chaperone SurA [surA]. 7 423 31.811 T 12-10-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0043165|GO:0050821|GO:0051082|GO:0060274 M892_06955 fd637fcb06de8faf19a81f29925503f3 225 SUPERFAMILY SSF161098 15 210 3.92E-47 T 12-10-2018 IPR035906 MetI-like superfamily M892_06955 fd637fcb06de8faf19a81f29925503f3 225 Gene3D G3DSA:1.10.3720.10 12 225 4.9E-51 T 12-10-2018 IPR035906 MetI-like superfamily M892_06955 fd637fcb06de8faf19a81f29925503f3 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 39 223 2.7E-24 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M892_24225 88a4dfa11f1ea6c725f0ec878f37709e 212 ProSitePatterns PS01333 Pyrrolidone-carboxylate peptidase glutamic acid active site. 69 85 - T 12-10-2018 IPR033693 Pyroglutamyl peptidase I, Glu active site MetaCyc: PWY-7942 M892_24225 88a4dfa11f1ea6c725f0ec878f37709e 212 TIGRFAM TIGR00504 pyro_pdase: pyroglutamyl-peptidase I 3 210 1.1E-76 T 12-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 M892_24225 88a4dfa11f1ea6c725f0ec878f37709e 212 Hamap MF_00417 Pyrrolidone-carboxylate peptidase [pcp]. 2 198 39.26 T 12-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 M892_24225 88a4dfa11f1ea6c725f0ec878f37709e 212 ProSitePatterns PS01334 Pyrrolidone-carboxylate peptidase cysteine active site. 130 144 - T 12-10-2018 IPR033694 Pyroglutamyl peptidase I, Cys active site MetaCyc: PWY-7942 M892_24225 88a4dfa11f1ea6c725f0ec878f37709e 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 80 100 5.0E-46 T 12-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 M892_24225 88a4dfa11f1ea6c725f0ec878f37709e 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 4 27 5.0E-46 T 12-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 M892_24225 88a4dfa11f1ea6c725f0ec878f37709e 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 132 148 5.0E-46 T 12-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 M892_24225 88a4dfa11f1ea6c725f0ec878f37709e 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 160 172 5.0E-46 T 12-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 M892_24225 88a4dfa11f1ea6c725f0ec878f37709e 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 62 74 5.0E-46 T 12-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 M892_24225 88a4dfa11f1ea6c725f0ec878f37709e 212 Gene3D G3DSA:3.40.630.20 1 212 3.4E-76 T 12-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 M892_24225 88a4dfa11f1ea6c725f0ec878f37709e 212 Pfam PF01470 Pyroglutamyl peptidase 2 199 1.2E-74 T 12-10-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like MetaCyc: PWY-7942 M892_24225 88a4dfa11f1ea6c725f0ec878f37709e 212 PIRSF PIRSF015592 1 210 3.5E-81 T 12-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 M892_24225 88a4dfa11f1ea6c725f0ec878f37709e 212 SUPERFAMILY SSF53182 1 211 7.85E-71 T 12-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 M892_21345 00d72314b6a4a2f7bf33d6b26d9c246e 689 Gene3D G3DSA:1.10.10.160 300 416 1.1E-49 T 12-10-2018 IPR013986 DExx box DNA helicase domain superfamily M892_21345 00d72314b6a4a2f7bf33d6b26d9c246e 689 Gene3D G3DSA:3.40.50.300 200 499 1.1E-49 T 12-10-2018 M892_21345 00d72314b6a4a2f7bf33d6b26d9c246e 689 Pfam PF13361 UvrD-like helicase C-terminal domain 596 667 1.7E-17 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 M892_21345 00d72314b6a4a2f7bf33d6b26d9c246e 689 Gene3D G3DSA:3.40.50.300 507 681 6.4E-30 T 12-10-2018 M892_21345 00d72314b6a4a2f7bf33d6b26d9c246e 689 SUPERFAMILY SSF52540 198 678 9.65E-85 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_21345 00d72314b6a4a2f7bf33d6b26d9c246e 689 Pfam PF00580 UvrD/REP helicase N-terminal domain 201 498 5.0E-40 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 M892_21345 00d72314b6a4a2f7bf33d6b26d9c246e 689 Pfam PF12462 DNA helicase IV / RNA helicase N terminal 1 166 4.8E-46 T 12-10-2018 IPR022161 DNA helicase IV, N-terminal domain M892_06140 3d86c6b06d92031ed3309a38402d31bb 563 Gene3D G3DSA:3.30.300.310 458 559 1.0E-29 T 12-10-2018 M892_06140 3d86c6b06d92031ed3309a38402d31bb 563 Pfam PF00501 AMP-binding enzyme 29 461 9.6E-109 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 M892_06140 3d86c6b06d92031ed3309a38402d31bb 563 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 12-10-2018 IPR020845 AMP-binding, conserved site M892_06140 3d86c6b06d92031ed3309a38402d31bb 563 SUPERFAMILY SSF56801 13 553 5.1E-151 T 12-10-2018 M892_06140 3d86c6b06d92031ed3309a38402d31bb 563 Gene3D G3DSA:3.40.50.12780 9 457 1.8E-119 T 12-10-2018 M892_06140 3d86c6b06d92031ed3309a38402d31bb 563 Pfam PF13193 AMP-binding enzyme C-terminal domain 470 544 2.0E-17 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain M892_08340 d7634583a7900a9cbb48e4cef1bc98a2 132 ProSitePatterns PS00893 Nudix box signature. 39 60 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 M892_08340 d7634583a7900a9cbb48e4cef1bc98a2 132 TIGRFAM TIGR00586 mutt: mutator mutT protein 1 127 3.7E-42 T 12-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 M892_08340 d7634583a7900a9cbb48e4cef1bc98a2 132 Gene3D G3DSA:3.90.79.10 1 132 5.8E-41 T 12-10-2018 M892_08340 d7634583a7900a9cbb48e4cef1bc98a2 132 SUPERFAMILY SSF55811 2 127 5.96E-35 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 M892_08340 d7634583a7900a9cbb48e4cef1bc98a2 132 PRINTS PR00502 NUDIX hydrolase family signature 48 63 7.5E-9 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 M892_08340 d7634583a7900a9cbb48e4cef1bc98a2 132 PRINTS PR00502 NUDIX hydrolase family signature 34 48 7.5E-9 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 M892_08340 d7634583a7900a9cbb48e4cef1bc98a2 132 Pfam PF00293 NUDIX domain 3 125 2.8E-21 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 M892_23190 bfc8e546b67caa08c9a96f1eeb1c2fe4 443 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 373 8.3E-150 T 12-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 M892_23190 bfc8e546b67caa08c9a96f1eeb1c2fe4 443 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 6 440 1.5E-146 T 12-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 M892_23190 bfc8e546b67caa08c9a96f1eeb1c2fe4 443 PIRSF PIRSF004539 1 441 4.8E-185 T 12-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 M892_23400 34479bf278750412525a03c008dea7f8 468 Gene3D G3DSA:1.10.287.950 135 468 1.1E-64 T 12-10-2018 M892_23400 34479bf278750412525a03c008dea7f8 468 Pfam PF17200 Single Cache domain 2 26 105 2.6E-21 T 12-10-2018 IPR033480 Single Cache domain 2 M892_23400 34479bf278750412525a03c008dea7f8 468 SUPERFAMILY SSF58104 158 467 3.27E-66 T 12-10-2018 M892_23400 34479bf278750412525a03c008dea7f8 468 Gene3D G3DSA:3.30.450.20 26 117 7.3E-26 T 12-10-2018 M892_23400 34479bf278750412525a03c008dea7f8 468 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 279 432 1.2E-39 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M892_23400 34479bf278750412525a03c008dea7f8 468 SMART SM00283 205 466 9.5E-53 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M892_23400 34479bf278750412525a03c008dea7f8 468 SMART SM00304 136 190 0.0042 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M892_14865 5b8e00682a0b46937f23d3c23bdca3c1 133 Gene3D G3DSA:1.20.1440.40 30 133 1.6E-34 T 12-10-2018 IPR036814 YqcC-like superfamily M892_14865 5b8e00682a0b46937f23d3c23bdca3c1 133 Pfam PF04287 tRNA pseudouridine synthase C 36 131 2.7E-35 T 12-10-2018 IPR023376 YqcC-like domain M892_14865 5b8e00682a0b46937f23d3c23bdca3c1 133 SUPERFAMILY SSF158452 30 132 1.57E-37 T 12-10-2018 IPR036814 YqcC-like superfamily M892_14865 5b8e00682a0b46937f23d3c23bdca3c1 133 PIRSF PIRSF006257 30 133 1.8E-42 T 12-10-2018 IPR007384 Protein of unknown function UCP006257 M892_02465 f39e7b3f8183e45b2561649329a450ba 347 Pfam PF13592 Winged helix-turn helix 98 155 1.9E-19 T 12-10-2018 IPR025959 Winged helix-turn helix domain M892_02465 f39e7b3f8183e45b2561649329a450ba 347 SUPERFAMILY SSF53098 221 318 1.15E-7 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_02465 f39e7b3f8183e45b2561649329a450ba 347 SUPERFAMILY SSF46689 16 131 5.97E-24 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_02465 f39e7b3f8183e45b2561649329a450ba 347 Gene3D G3DSA:3.30.420.470 135 342 9.5E-12 T 12-10-2018 M892_02465 f39e7b3f8183e45b2561649329a450ba 347 Pfam PF13384 Homeodomain-like domain 28 67 9.1E-6 T 12-10-2018 M892_02465 f39e7b3f8183e45b2561649329a450ba 347 Pfam PF13358 DDE superfamily endonuclease 169 312 2.4E-34 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_13215 245f102989c8beb184bf20f4aab9d9ac 96 SMART SM01152 8 84 2.1E-39 T 12-10-2018 IPR003746 Protein of unknown function DUF167 M892_13215 245f102989c8beb184bf20f4aab9d9ac 96 TIGRFAM TIGR00251 TIGR00251: TIGR00251 family protein 8 92 1.1E-27 T 12-10-2018 IPR005228 Conserved hypothetical protein CHP00251 M892_13215 245f102989c8beb184bf20f4aab9d9ac 96 Hamap MF_00634 UPF0235 protein YggU [yggU]. 8 94 20.578 T 12-10-2018 IPR003746 Protein of unknown function DUF167 M892_13215 245f102989c8beb184bf20f4aab9d9ac 96 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 12 83 7.5E-26 T 12-10-2018 IPR003746 Protein of unknown function DUF167 M892_13215 245f102989c8beb184bf20f4aab9d9ac 96 SUPERFAMILY SSF69786 4 95 3.01E-32 T 12-10-2018 IPR036591 YggU-like superfamily M892_13215 245f102989c8beb184bf20f4aab9d9ac 96 Gene3D G3DSA:3.30.1200.10 1 96 8.9E-35 T 12-10-2018 IPR036591 YggU-like superfamily M892_09655 825f6aa97c3e3c892b81408229061782 827 Pfam PF00593 TonB dependent receptor 343 825 6.4E-44 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel M892_09655 825f6aa97c3e3c892b81408229061782 827 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 810 827 - T 12-10-2018 IPR010917 TonB-dependent receptor, conserved site M892_09655 825f6aa97c3e3c892b81408229061782 827 SUPERFAMILY SSF56935 27 827 2.09E-103 T 12-10-2018 M892_09655 825f6aa97c3e3c892b81408229061782 827 Gene3D G3DSA:2.40.170.20 410 827 2.6E-54 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily M892_09655 825f6aa97c3e3c892b81408229061782 827 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 168 8.7E-26 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain M892_09655 825f6aa97c3e3c892b81408229061782 827 Gene3D G3DSA:2.170.130.10 32 172 3.1E-38 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily M892_21055 54ea268d5e7ace367470cc97b696831e 240 SUPERFAMILY SSF48452 61 220 1.56E-19 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_21055 54ea268d5e7ace367470cc97b696831e 240 SMART SM00028 128 161 93.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_21055 54ea268d5e7ace367470cc97b696831e 240 SMART SM00028 94 127 280.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_21055 54ea268d5e7ace367470cc97b696831e 240 SMART SM00028 162 195 0.35 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_21055 54ea268d5e7ace367470cc97b696831e 240 Gene3D G3DSA:1.25.40.10 164 233 5.0E-11 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_21055 54ea268d5e7ace367470cc97b696831e 240 Gene3D G3DSA:1.25.40.10 34 157 4.3E-14 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_21055 54ea268d5e7ace367470cc97b696831e 240 Pfam PF14559 Tetratricopeptide repeat 173 220 1.4E-10 T 12-10-2018 M892_04515 a876563b9920d00df277e660016538b5 440 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 349 358 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M892_04515 a876563b9920d00df277e660016538b5 440 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 358 2.2E-78 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M892_04515 a876563b9920d00df277e660016538b5 440 TIGRFAM TIGR02546 III_secr_ATP: type III secretion apparatus H+-transporting two-sector ATPase 21 437 6.3E-201 T 12-10-2018 IPR013380 ATPase, type III secretion system, H+-transporting GO:0005524|GO:0005737|GO:0006754|GO:0030254|GO:0030257|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M892_04515 a876563b9920d00df277e660016538b5 440 Gene3D G3DSA:3.40.50.12240 16 438 8.0E-152 T 12-10-2018 M892_04515 a876563b9920d00df277e660016538b5 440 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 27 92 1.3E-9 T 12-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M892_04515 a876563b9920d00df277e660016538b5 440 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 9 437 3.9E-176 T 12-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M892_04515 a876563b9920d00df277e660016538b5 440 SUPERFAMILY SSF52540 95 364 1.04E-96 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_04515 a876563b9920d00df277e660016538b5 440 SMART SM00382 161 342 5.7E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_02270 adcdf476df14a73d408f8c5e36c0565f 249 SUPERFAMILY SSF53335 5 221 1.69E-31 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M892_02270 adcdf476df14a73d408f8c5e36c0565f 249 Pfam PF13847 Methyltransferase domain 50 154 1.5E-18 T 12-10-2018 IPR025714 Methyltransferase domain M892_02270 adcdf476df14a73d408f8c5e36c0565f 249 Gene3D G3DSA:3.40.50.150 5 222 1.3E-31 T 12-10-2018 M892_14520 0b47480ba62f595189ff55b80dae14d6 519 Gene3D G3DSA:3.50.50.60 17 378 1.8E-142 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_14520 0b47480ba62f595189ff55b80dae14d6 519 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 21 38 - T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 M892_14520 0b47480ba62f595189ff55b80dae14d6 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 90 102 1.2E-28 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 M892_14520 0b47480ba62f595189ff55b80dae14d6 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 325 331 1.2E-28 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 M892_14520 0b47480ba62f595189ff55b80dae14d6 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 16 28 1.2E-28 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 M892_14520 0b47480ba62f595189ff55b80dae14d6 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 29 39 1.2E-28 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 M892_14520 0b47480ba62f595189ff55b80dae14d6 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 359 371 1.2E-28 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 M892_14520 0b47480ba62f595189ff55b80dae14d6 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 45 57 1.2E-28 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 M892_14520 0b47480ba62f595189ff55b80dae14d6 519 Gene3D G3DSA:3.30.9.10 94 332 1.8E-142 T 12-10-2018 M892_14520 0b47480ba62f595189ff55b80dae14d6 519 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 393 500 1.2E-9 T 12-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 M892_14520 0b47480ba62f595189ff55b80dae14d6 519 SUPERFAMILY SSF51905 16 384 1.42E-31 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_14520 0b47480ba62f595189ff55b80dae14d6 519 Pfam PF01266 FAD dependent oxidoreductase 17 335 1.6E-49 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 M892_14520 0b47480ba62f595189ff55b80dae14d6 519 Gene3D G3DSA:1.10.8.870 404 475 3.4E-13 T 12-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 M892_22435 5f4c331b337c7ac62ad035c5db79be14 1129 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 92 1127 1.1E-172 T 12-10-2018 IPR017731 Type VI secretion system, IcmF M892_22435 5f4c331b337c7ac62ad035c5db79be14 1129 Pfam PF14331 ImcF-related N-terminal domain 154 408 2.3E-49 T 12-10-2018 IPR025743 ImcF-related, N-terminal domain M892_22435 5f4c331b337c7ac62ad035c5db79be14 1129 Pfam PF06761 Intracellular multiplication and human macrophage-killing 486 755 1.1E-43 T 12-10-2018 IPR009612 ImcF-related M892_22435 5f4c331b337c7ac62ad035c5db79be14 1129 Pfam PF06744 Type VI secretion protein IcmF C-terminal 878 1078 1.8E-47 T 12-10-2018 IPR010623 Type VI secretion system IcmF, C-terminal M892_02700 adb9a511d21777bb02d2663a39ecea65 226 Pfam PF08856 Protein of unknown function (DUF1826) 28 224 3.0E-66 T 12-10-2018 IPR014955 Protein of unknown function DUF1826 M892_00085 994a799f1c68fb0c7d44c06d0d81dddb 230 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 47 61 - T 12-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 M892_00085 994a799f1c68fb0c7d44c06d0d81dddb 230 Pfam PF00849 RNA pseudouridylate synthase 10 153 1.0E-25 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 M892_00085 994a799f1c68fb0c7d44c06d0d81dddb 230 Gene3D G3DSA:3.30.2350.10 1 195 1.3E-47 T 12-10-2018 M892_00085 994a799f1c68fb0c7d44c06d0d81dddb 230 TIGRFAM TIGR01621 RluA-like: pseudouridine synthase Rlu family protein, TIGR01621 1 220 2.4E-106 T 12-10-2018 IPR006508 Pseudouridine synthase, RluA-like M892_00085 994a799f1c68fb0c7d44c06d0d81dddb 230 SUPERFAMILY SSF55120 2 199 3.52E-47 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 M892_08130 f4abe01222aceec8bbf86f21a2bfffae 172 SUPERFAMILY SSF52218 1 167 2.35E-49 T 12-10-2018 IPR029039 Flavoprotein-like superfamily M892_08130 f4abe01222aceec8bbf86f21a2bfffae 172 TIGRFAM TIGR01752 flav_long: flavodoxin 2 168 6.4E-69 T 12-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 M892_08130 f4abe01222aceec8bbf86f21a2bfffae 172 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 12-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 M892_08130 f4abe01222aceec8bbf86f21a2bfffae 172 Pfam PF00258 Flavodoxin 5 160 5.3E-28 T 12-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 M892_08130 f4abe01222aceec8bbf86f21a2bfffae 172 Gene3D G3DSA:3.40.50.360 1 172 5.5E-51 T 12-10-2018 IPR029039 Flavoprotein-like superfamily M892_08130 f4abe01222aceec8bbf86f21a2bfffae 172 PIRSF PIRSF038996 1 171 3.2E-59 T 12-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 M892_14720 d1c17f4fc0f7a022bd15e1d93759c520 466 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 22 466 1.7E-202 T 12-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 M892_14720 d1c17f4fc0f7a022bd15e1d93759c520 466 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 21 466 46.086 T 12-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 M892_14720 d1c17f4fc0f7a022bd15e1d93759c520 466 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 21 276 5.0E-113 T 12-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 M892_14720 d1c17f4fc0f7a022bd15e1d93759c520 466 Pfam PF11973 NQRA C-terminal domain 281 330 7.6E-21 T 12-10-2018 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 M892_09990 4c15188e79b714f8136796e1339508e1 82 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 81 24.775 T 12-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 M892_09990 4c15188e79b714f8136796e1339508e1 82 Pfam PF02416 mttA/Hcf106 family 4 52 6.5E-13 T 12-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 M892_09990 4c15188e79b714f8136796e1339508e1 82 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 47 5.4E-21 T 12-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 M892_20920 fab272e408ba1854b7e228f34b7ef782 206 Pfam PF08721 TnsA endonuclease C terminal 127 193 5.2E-5 T 12-10-2018 IPR014832 TnsA endonuclease C-terminal M892_20920 fab272e408ba1854b7e228f34b7ef782 206 Pfam PF08722 TnsA endonuclease N terminal 45 119 3.9E-13 T 12-10-2018 IPR014833 TnsA endonuclease, N-terminal M892_02640 d0cf13b01ab78f9507bdccbeb3b3349b 255 Hamap MF_01005 Vitamin B12 import ATP-binding protein BtuD [btuD]. 1 255 43.492 T 12-10-2018 IPR023693 ABC transporter, vitamin B12, BtuD GO:0005524|GO:0015889|GO:0016887 M892_02640 d0cf13b01ab78f9507bdccbeb3b3349b 255 SUPERFAMILY SSF52540 16 231 1.98E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_02640 d0cf13b01ab78f9507bdccbeb3b3349b 255 SMART SM00382 22 217 2.4E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_02640 d0cf13b01ab78f9507bdccbeb3b3349b 255 Pfam PF00005 ABC transporter 15 168 5.2E-20 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_02640 d0cf13b01ab78f9507bdccbeb3b3349b 255 Gene3D G3DSA:3.40.50.300 11 254 1.2E-50 T 12-10-2018 M892_22050 31cb4644d0ee47dec55725ece8c570a3 306 Gene3D G3DSA:1.10.3720.10 68 304 2.7E-51 T 12-10-2018 IPR035906 MetI-like superfamily M892_22050 31cb4644d0ee47dec55725ece8c570a3 306 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 71 140 1.4E-15 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 M892_22050 31cb4644d0ee47dec55725ece8c570a3 306 SUPERFAMILY SSF161098 72 293 2.62E-41 T 12-10-2018 IPR035906 MetI-like superfamily M892_22050 31cb4644d0ee47dec55725ece8c570a3 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 300 1.4E-19 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M892_00435 34c595ace44e3437d89b9cdf60d60d05 142 SUPERFAMILY SSF47413 2 71 6.44E-12 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 M892_00435 34c595ace44e3437d89b9cdf60d60d05 142 Gene3D G3DSA:1.10.260.40 1 87 7.1E-14 T 12-10-2018 M892_00435 34c595ace44e3437d89b9cdf60d60d05 142 SMART SM00530 5 68 1.3E-7 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 M892_00435 34c595ace44e3437d89b9cdf60d60d05 142 Pfam PF01381 Helix-turn-helix 6 64 5.0E-12 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 M892_15295 a900cb165635dff363cab124617ec2f2 136 Gene3D G3DSA:2.30.330.10 44 136 3.8E-34 T 12-10-2018 IPR036429 SpoA-like superfamily M892_15295 a900cb165635dff363cab124617ec2f2 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 73 89 5.6E-28 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 M892_15295 a900cb165635dff363cab124617ec2f2 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 89 102 5.6E-28 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 M892_15295 a900cb165635dff363cab124617ec2f2 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 102 117 5.6E-28 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 M892_15295 a900cb165635dff363cab124617ec2f2 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 56 72 5.6E-28 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 M892_15295 a900cb165635dff363cab124617ec2f2 136 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 54 128 1.5E-33 T 12-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 M892_15295 a900cb165635dff363cab124617ec2f2 136 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 56 126 6.6E-25 T 12-10-2018 IPR001543 Surface presentation of antigen (SpoA) M892_15295 a900cb165635dff363cab124617ec2f2 136 SUPERFAMILY SSF101801 54 134 7.32E-25 T 12-10-2018 IPR036429 SpoA-like superfamily M892_27705 a6c1c88adc5927937904073379fd0a67 324 SUPERFAMILY SSF110849 75 150 1.88E-8 T 12-10-2018 IPR036086 ParB/Sulfiredoxin superfamily M892_27705 a6c1c88adc5927937904073379fd0a67 324 Gene3D G3DSA:1.10.10.2830 153 274 9.8E-16 T 12-10-2018 M892_27705 a6c1c88adc5927937904073379fd0a67 324 Pfam PF02195 ParB-like nuclease domain 78 145 1.1E-7 T 12-10-2018 IPR003115 ParB/Sulfiredoxin M892_27705 a6c1c88adc5927937904073379fd0a67 324 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 68 227 1.5E-21 T 12-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 M892_27705 a6c1c88adc5927937904073379fd0a67 324 SMART SM00470 53 149 2.6E-7 T 12-10-2018 IPR003115 ParB/Sulfiredoxin M892_27705 a6c1c88adc5927937904073379fd0a67 324 SUPERFAMILY SSF109709 152 238 6.15E-5 T 12-10-2018 M892_14840 0e412f54917b9e8b3fe942165cb3aaae 147 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 29.692 T 12-10-2018 IPR003791 Protein of unknown function UPF0178 M892_14840 0e412f54917b9e8b3fe942165cb3aaae 147 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 18 145 9.4E-48 T 12-10-2018 IPR003791 Protein of unknown function UPF0178 M892_00815 893467acc245d1b6dff4fe90d1804d01 592 SMART SM00382 362 547 5.6E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_00815 893467acc245d1b6dff4fe90d1804d01 592 Pfam PF00664 ABC transporter transmembrane region 24 291 2.2E-43 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 M892_00815 893467acc245d1b6dff4fe90d1804d01 592 SUPERFAMILY SSF90123 8 322 2.62E-70 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 M892_00815 893467acc245d1b6dff4fe90d1804d01 592 Gene3D G3DSA:1.20.1560.10 1 324 2.5E-73 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 M892_00815 893467acc245d1b6dff4fe90d1804d01 592 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_00815 893467acc245d1b6dff4fe90d1804d01 592 SUPERFAMILY SSF52540 332 571 1.31E-77 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_00815 893467acc245d1b6dff4fe90d1804d01 592 Pfam PF00005 ABC transporter 353 501 1.2E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_00815 893467acc245d1b6dff4fe90d1804d01 592 Gene3D G3DSA:3.40.50.300 329 589 2.0E-82 T 12-10-2018 M892_02115 fe74de505f0082679700b6a3e8e1d709 490 Pfam PF13655 N-terminal domain of reverse transcriptase 16 97 9.9E-32 T 12-10-2018 IPR025960 Reverse transcriptase, N-terminal domain M892_02115 fe74de505f0082679700b6a3e8e1d709 490 SUPERFAMILY SSF56672 89 406 1.67E-49 T 12-10-2018 M892_02115 fe74de505f0082679700b6a3e8e1d709 490 Pfam PF08388 Group II intron, maturase-specific domain 341 416 1.4E-23 T 12-10-2018 IPR013597 Group II intron, maturase-specific M892_02115 fe74de505f0082679700b6a3e8e1d709 490 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 60 403 1.9E-109 T 12-10-2018 IPR030931 Group II intron reverse transcriptase/maturase M892_02115 fe74de505f0082679700b6a3e8e1d709 490 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 112 321 1.9E-41 T 12-10-2018 IPR000477 Reverse transcriptase domain M892_00560 fe74de505f0082679700b6a3e8e1d709 490 Pfam PF13655 N-terminal domain of reverse transcriptase 16 97 9.9E-32 T 12-10-2018 IPR025960 Reverse transcriptase, N-terminal domain M892_00560 fe74de505f0082679700b6a3e8e1d709 490 SUPERFAMILY SSF56672 89 406 1.67E-49 T 12-10-2018 M892_00560 fe74de505f0082679700b6a3e8e1d709 490 Pfam PF08388 Group II intron, maturase-specific domain 341 416 1.4E-23 T 12-10-2018 IPR013597 Group II intron, maturase-specific M892_00560 fe74de505f0082679700b6a3e8e1d709 490 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 60 403 1.9E-109 T 12-10-2018 IPR030931 Group II intron reverse transcriptase/maturase M892_00560 fe74de505f0082679700b6a3e8e1d709 490 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 112 321 1.9E-41 T 12-10-2018 IPR000477 Reverse transcriptase domain M892_07480 fe74de505f0082679700b6a3e8e1d709 490 Pfam PF13655 N-terminal domain of reverse transcriptase 16 97 9.9E-32 T 12-10-2018 IPR025960 Reverse transcriptase, N-terminal domain M892_07480 fe74de505f0082679700b6a3e8e1d709 490 SUPERFAMILY SSF56672 89 406 1.67E-49 T 12-10-2018 M892_07480 fe74de505f0082679700b6a3e8e1d709 490 Pfam PF08388 Group II intron, maturase-specific domain 341 416 1.4E-23 T 12-10-2018 IPR013597 Group II intron, maturase-specific M892_07480 fe74de505f0082679700b6a3e8e1d709 490 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 60 403 1.9E-109 T 12-10-2018 IPR030931 Group II intron reverse transcriptase/maturase M892_07480 fe74de505f0082679700b6a3e8e1d709 490 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 112 321 1.9E-41 T 12-10-2018 IPR000477 Reverse transcriptase domain M892_19815 93323557be609a1521c73551a0e25adf 209 Gene3D G3DSA:1.20.1050.10 89 209 6.2E-26 T 12-10-2018 M892_19815 93323557be609a1521c73551a0e25adf 209 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 73 3.1E-11 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 M892_19815 93323557be609a1521c73551a0e25adf 209 Pfam PF04399 Glutaredoxin 2, C terminal domain 87 208 5.4E-35 T 12-10-2018 IPR007494 Glutaredoxin 2, C-terminal M892_19815 93323557be609a1521c73551a0e25adf 209 SUPERFAMILY SSF47616 76 208 8.16E-42 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily M892_19815 93323557be609a1521c73551a0e25adf 209 TIGRFAM TIGR02182 GRXB: glutaredoxin, GrxB family 2 208 7.2E-81 T 12-10-2018 IPR011901 Glutaredoxin-2 GO:0005829|GO:0097573 M892_19815 93323557be609a1521c73551a0e25adf 209 Gene3D G3DSA:3.40.30.10 8 85 9.4E-23 T 12-10-2018 M892_19815 93323557be609a1521c73551a0e25adf 209 SUPERFAMILY SSF52833 1 69 8.9E-15 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M892_04055 c5786a8ade2e89bcfa83d5a566324c99 205 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 9 194 4.0E-102 T 12-10-2018 M892_04055 c5786a8ade2e89bcfa83d5a566324c99 205 Pfam PF04356 Protein of unknown function (DUF489) 7 195 8.7E-77 T 12-10-2018 IPR007451 High frequency lysogenization protein HflD M892_04055 c5786a8ade2e89bcfa83d5a566324c99 205 SUPERFAMILY SSF101322 2 204 4.18E-80 T 12-10-2018 IPR035932 HflD-like superfamily M892_04055 c5786a8ade2e89bcfa83d5a566324c99 205 Gene3D G3DSA:1.10.3890.10 1 205 1.4E-77 T 12-10-2018 IPR035932 HflD-like superfamily M892_04055 c5786a8ade2e89bcfa83d5a566324c99 205 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 203 35.789 T 12-10-2018 IPR007451 High frequency lysogenization protein HflD M892_15090 a27d1f8e1791c9546c40899ae2f85ce3 190 SUPERFAMILY SSF52218 4 187 5.11E-57 T 12-10-2018 IPR029039 Flavoprotein-like superfamily M892_15090 a27d1f8e1791c9546c40899ae2f85ce3 190 ProSitePatterns PS00201 Flavodoxin signature. 7 23 - T 12-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 M892_15090 a27d1f8e1791c9546c40899ae2f85ce3 190 Pfam PF03358 NADPH-dependent FMN reductase 12 135 4.6E-12 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 M892_15090 a27d1f8e1791c9546c40899ae2f85ce3 190 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 4 186 1.1E-39 T 12-10-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 M892_15090 a27d1f8e1791c9546c40899ae2f85ce3 190 Gene3D G3DSA:3.40.50.360 1 190 6.4E-63 T 12-10-2018 IPR029039 Flavoprotein-like superfamily M892_10020 d54c3d1f05d8a74769f413a2082dd65b 815 Gene3D G3DSA:3.30.450.20 270 391 9.4E-37 T 12-10-2018 M892_10020 d54c3d1f05d8a74769f413a2082dd65b 815 SUPERFAMILY SSF141868 572 813 9.55E-89 T 12-10-2018 IPR035919 EAL domain superfamily M892_10020 d54c3d1f05d8a74769f413a2082dd65b 815 Pfam PF08448 PAS fold 159 262 1.7E-10 T 12-10-2018 IPR013656 PAS fold-4 M892_10020 d54c3d1f05d8a74769f413a2082dd65b 815 PIRSF PIRSF005925 146 275 0.0025 T 12-10-2018 IPR012226 Diguanylate cyclase/phosphodiesterase M892_10020 d54c3d1f05d8a74769f413a2082dd65b 815 PIRSF PIRSF005925 262 391 2.6E-13 T 12-10-2018 IPR012226 Diguanylate cyclase/phosphodiesterase M892_10020 d54c3d1f05d8a74769f413a2082dd65b 815 PIRSF PIRSF005925 381 815 3.0E-135 T 12-10-2018 IPR012226 Diguanylate cyclase/phosphodiesterase M892_10020 d54c3d1f05d8a74769f413a2082dd65b 815 Pfam PF00563 EAL domain 572 807 1.0E-75 T 12-10-2018 IPR001633 EAL domain M892_10020 d54c3d1f05d8a74769f413a2082dd65b 815 SUPERFAMILY SSF55785 133 256 1.92E-15 T 12-10-2018 IPR035965 PAS domain superfamily M892_10020 d54c3d1f05d8a74769f413a2082dd65b 815 SMART SM00086 341 383 7.5E-8 T 12-10-2018 IPR001610 PAC motif M892_10020 d54c3d1f05d8a74769f413a2082dd65b 815 SMART SM00086 219 261 7.0 T 12-10-2018 IPR001610 PAC motif M892_10020 d54c3d1f05d8a74769f413a2082dd65b 815 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 151 268 5.8E-7 T 12-10-2018 IPR000014 PAS domain M892_10020 d54c3d1f05d8a74769f413a2082dd65b 815 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 273 390 1.2E-24 T 12-10-2018 IPR000014 PAS domain M892_10020 d54c3d1f05d8a74769f413a2082dd65b 815 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 390 554 7.2E-45 T 12-10-2018 IPR000160 GGDEF domain M892_10020 d54c3d1f05d8a74769f413a2082dd65b 815 Gene3D G3DSA:3.20.20.450 570 815 1.4E-99 T 12-10-2018 IPR035919 EAL domain superfamily M892_10020 d54c3d1f05d8a74769f413a2082dd65b 815 Gene3D G3DSA:3.30.70.270 392 569 1.3E-58 T 12-10-2018 M892_10020 d54c3d1f05d8a74769f413a2082dd65b 815 Pfam PF00990 Diguanylate cyclase, GGDEF domain 394 551 6.7E-48 T 12-10-2018 IPR000160 GGDEF domain M892_10020 d54c3d1f05d8a74769f413a2082dd65b 815 Pfam PF00989 PAS fold 273 380 4.2E-19 T 12-10-2018 IPR013767 PAS fold GO:0006355 M892_10020 d54c3d1f05d8a74769f413a2082dd65b 815 Gene3D G3DSA:3.30.450.20 140 269 1.9E-18 T 12-10-2018 M892_10020 d54c3d1f05d8a74769f413a2082dd65b 815 SUPERFAMILY SSF55073 399 558 3.06E-47 T 12-10-2018 IPR029787 Nucleotide cyclase M892_10020 d54c3d1f05d8a74769f413a2082dd65b 815 SMART SM00267 383 556 9.1E-62 T 12-10-2018 IPR000160 GGDEF domain M892_10020 d54c3d1f05d8a74769f413a2082dd65b 815 SMART SM00052 566 812 1.2E-117 T 12-10-2018 IPR001633 EAL domain M892_10020 d54c3d1f05d8a74769f413a2082dd65b 815 SUPERFAMILY SSF55785 277 380 2.44E-29 T 12-10-2018 IPR035965 PAS domain superfamily M892_10020 d54c3d1f05d8a74769f413a2082dd65b 815 SMART SM00091 146 212 30.0 T 12-10-2018 IPR000014 PAS domain M892_10020 d54c3d1f05d8a74769f413a2082dd65b 815 SMART SM00091 269 336 1.4E-8 T 12-10-2018 IPR000014 PAS domain M892_17055 d89b60c2b02d3ea0a905670ed7eb31d8 396 ProDom PD037532 SYNTHASE LACTONE HOMOSERINE AUTOINDUCER N-OCTANOYL VANM AINS LUXM SYNTHESIS 181 394 3.0E-126 T 12-10-2018 IPR020384 Homoserine lactone synthase LuxM/VanM, C-terminal GO:0016747 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 M892_17055 d89b60c2b02d3ea0a905670ed7eb31d8 396 Pfam PF17327 Acyl homoserine lactone synthase 15 387 9.9E-156 T 12-10-2018 IPR035304 Acyl homoserine lactone synthase GO:0009372|GO:0061579 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 M892_17055 d89b60c2b02d3ea0a905670ed7eb31d8 396 ProDom PD097636 LACTONE SYNTHASE HOMOSERINE VANM AUTOINDUCER SYNTHESIS LUXL 1 156 7.0E-88 T 12-10-2018 IPR020374 Homoserine lactone synthase LuxM/VanM, N-terminal GO:0016747 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 M892_09500 f1b727d60fff987f67e68307daf82a96 333 Pfam PF03102 NeuB family 25 265 4.2E-94 T 12-10-2018 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 Reactome: R-HSA-4085001 M892_09500 f1b727d60fff987f67e68307daf82a96 333 SUPERFAMILY SSF51269 273 333 1.7E-16 T 12-10-2018 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily Reactome: R-HSA-4085001 M892_09500 f1b727d60fff987f67e68307daf82a96 333 Gene3D G3DSA:3.90.1210.10 270 333 1.1E-19 T 12-10-2018 M892_09500 f1b727d60fff987f67e68307daf82a96 333 Gene3D G3DSA:3.20.20.70 1 265 4.2E-103 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M892_09500 f1b727d60fff987f67e68307daf82a96 333 TIGRFAM TIGR03569 NeuB_NnaB: N-acetylneuraminate synthase 5 333 4.6E-149 T 12-10-2018 IPR020007 N-acetylneuraminate synthase KEGG: 00520+2.5.1.101|MetaCyc: PWY-6749|MetaCyc: PWY-7131 M892_09500 f1b727d60fff987f67e68307daf82a96 333 Pfam PF08666 SAF domain 283 333 2.7E-9 T 12-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 M892_09500 f1b727d60fff987f67e68307daf82a96 333 SUPERFAMILY SSF51569 3 287 2.62E-87 T 12-10-2018 M892_11180 95b6ec9c5a09686825db4f31db4a97ca 156 SUPERFAMILY SSF88697 1 149 1.7E-62 T 12-10-2018 IPR015947 PUA-like superfamily M892_11180 95b6ec9c5a09686825db4f31db4a97ca 156 Gene3D G3DSA:3.10.590.10 1 153 1.9E-65 T 12-10-2018 M892_11180 95b6ec9c5a09686825db4f31db4a97ca 156 Pfam PF01878 EVE domain 2 147 1.9E-55 T 12-10-2018 IPR002740 EVE domain M892_24990 04692edf83ab1d0cbff79a88c6439a65 514 Pfam PF13005 zinc-finger binding domain of transposase IS66 120 164 1.6E-16 T 12-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 M892_24990 04692edf83ab1d0cbff79a88c6439a65 514 Pfam PF13007 Transposase C of IS166 homeodomain 42 112 2.2E-14 T 12-10-2018 IPR024463 Transposase TnpC, homeodomain M892_24990 04692edf83ab1d0cbff79a88c6439a65 514 Pfam PF03050 Transposase IS66 family 184 467 3.0E-101 T 12-10-2018 IPR004291 Transposase, IS66 M892_24990 04692edf83ab1d0cbff79a88c6439a65 514 Pfam PF13817 IS66 C-terminal element 474 510 7.6E-8 T 12-10-2018 IPR039552 Transposase IS66, C-terminal M892_19945 2991b5bfa6a703cbb431c9b5d9a4d3be 308 Gene3D G3DSA:3.40.50.1980 195 303 3.1E-6 T 12-10-2018 M892_19945 2991b5bfa6a703cbb431c9b5d9a4d3be 308 Gene3D G3DSA:3.40.50.1980 37 193 8.7E-19 T 12-10-2018 M892_19945 2991b5bfa6a703cbb431c9b5d9a4d3be 308 Pfam PF01297 Zinc-uptake complex component A periplasmic 49 301 1.3E-24 T 12-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 M892_19945 2991b5bfa6a703cbb431c9b5d9a4d3be 308 SUPERFAMILY SSF53807 29 300 5.89E-53 T 12-10-2018 M892_18070 04c04183495f81f80498b79cc7f0fbf6 356 Gene3D G3DSA:2.40.30.170 237 314 3.1E-33 T 12-10-2018 M892_18070 04c04183495f81f80498b79cc7f0fbf6 356 Gene3D G3DSA:2.40.50.100 48 236 3.1E-33 T 12-10-2018 M892_18070 04c04183495f81f80498b79cc7f0fbf6 356 Gene3D G3DSA:1.10.287.470 79 201 3.1E-33 T 12-10-2018 M892_18070 04c04183495f81f80498b79cc7f0fbf6 356 SUPERFAMILY SSF111369 47 249 1.83E-16 T 12-10-2018 M892_18070 04c04183495f81f80498b79cc7f0fbf6 356 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 190 278 4.6E-8 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain M892_18070 04c04183495f81f80498b79cc7f0fbf6 356 Gene3D G3DSA:2.40.420.20 315 326 3.1E-33 T 12-10-2018 M892_18070 04c04183495f81f80498b79cc7f0fbf6 356 Pfam PF13533 Biotin-lipoyl like 48 92 1.8E-10 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain M892_20245 2c6551c1fb2795d8eb71ec2d153a07a8 141 Gene3D G3DSA:3.40.50.620 2 141 1.3E-34 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M892_20245 2c6551c1fb2795d8eb71ec2d153a07a8 141 SUPERFAMILY SSF52402 3 139 4.86E-24 T 12-10-2018 M892_20245 2c6551c1fb2795d8eb71ec2d153a07a8 141 Pfam PF00582 Universal stress protein family 3 138 4.0E-13 T 12-10-2018 IPR006016 UspA M892_20245 2c6551c1fb2795d8eb71ec2d153a07a8 141 PIRSF PIRSF006276 1 141 1.4E-42 T 12-10-2018 IPR006015 Universal stress protein A M892_06730 b189a30cbb86c00a7b7d896676923d04 157 Gene3D G3DSA:3.90.960.10 1 157 2.8E-58 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 M892_06730 b189a30cbb86c00a7b7d896676923d04 157 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 156 1.3E-59 T 12-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC M892_06730 b189a30cbb86c00a7b7d896676923d04 157 Pfam PF04073 Aminoacyl-tRNA editing domain 32 146 4.6E-26 T 12-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 M892_06730 b189a30cbb86c00a7b7d896676923d04 157 SUPERFAMILY SSF55826 2 156 1.7E-43 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 M892_06730 b189a30cbb86c00a7b7d896676923d04 157 PIRSF PIRSF006181 1 157 3.2E-53 T 12-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC M892_02935 b6334caccd53b8b804e34ded1f92a17f 763 Gene3D G3DSA:1.10.490.40 108 170 2.3E-8 T 12-10-2018 IPR036801 Diphtheria toxin, translocation domain superfamily M892_15400 951173e1390a3e683fc597fddc9e3ebe 68 Pfam PF04995 Heme exporter protein D (CcmD) 13 55 5.6E-17 T 12-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 M892_15400 951173e1390a3e683fc597fddc9e3ebe 68 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 10 56 7.6E-19 T 12-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 M892_21425 242698c217621be2f3518f6b9483ae80 286 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 286 1.1E-106 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_21425 242698c217621be2f3518f6b9483ae80 286 Gene3D G3DSA:1.10.287.80 6 282 1.2E-108 T 12-10-2018 M892_21425 242698c217621be2f3518f6b9483ae80 286 Pfam PF00231 ATP synthase 3 285 3.3E-96 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_21425 242698c217621be2f3518f6b9483ae80 286 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 1.7E-37 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_21425 242698c217621be2f3518f6b9483ae80 286 PRINTS PR00126 ATP synthase gamma subunit signature 233 252 1.7E-37 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_21425 242698c217621be2f3518f6b9483ae80 286 PRINTS PR00126 ATP synthase gamma subunit signature 264 285 1.7E-37 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_21425 242698c217621be2f3518f6b9483ae80 286 PRINTS PR00126 ATP synthase gamma subunit signature 165 182 1.7E-37 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_21425 242698c217621be2f3518f6b9483ae80 286 SUPERFAMILY SSF52943 2 286 3.27E-96 T 12-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_21425 242698c217621be2f3518f6b9483ae80 286 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 286 35.774 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_21425 242698c217621be2f3518f6b9483ae80 286 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 272 285 - T 12-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_21425 242698c217621be2f3518f6b9483ae80 286 Gene3D G3DSA:3.40.1380.10 61 205 1.2E-108 T 12-10-2018 M892_10960 f765a0403b774e69488ff370a1b6dfdf 308 Pfam PF05114 Protein of unknown function (DUF692) 28 291 3.4E-106 T 12-10-2018 IPR007801 Uncharacterised protein family UPF0276 M892_10960 f765a0403b774e69488ff370a1b6dfdf 308 Hamap MF_00697 UPF0276 protein . 28 300 44.065 T 12-10-2018 IPR007801 Uncharacterised protein family UPF0276 M892_10960 f765a0403b774e69488ff370a1b6dfdf 308 SUPERFAMILY SSF51658 48 276 9.94E-13 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily M892_10960 f765a0403b774e69488ff370a1b6dfdf 308 Gene3D G3DSA:3.20.20.150 24 300 4.5E-87 T 12-10-2018 M892_24765 dc6aea72739f83c82c28f5516f92711a 217 Pfam PF01966 HD domain 33 134 1.7E-14 T 12-10-2018 IPR006674 HD domain M892_24765 dc6aea72739f83c82c28f5516f92711a 217 SMART SM00471 27 144 3.2E-7 T 12-10-2018 IPR003607 HD/PDEase domain M892_24765 dc6aea72739f83c82c28f5516f92711a 217 SUPERFAMILY SSF109604 14 216 5.34E-61 T 12-10-2018 M892_24765 dc6aea72739f83c82c28f5516f92711a 217 Gene3D G3DSA:1.10.3210.50 7 217 1.3E-69 T 12-10-2018 M892_18030 ba28c878e7a6517967c20e79c84b6699 382 Gene3D G3DSA:3.40.50.720 185 323 2.1E-152 T 12-10-2018 M892_18030 ba28c878e7a6517967c20e79c84b6699 382 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 13 380 5.1E-228 T 12-10-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 M892_18030 ba28c878e7a6517967c20e79c84b6699 382 SUPERFAMILY SSF50129 10 196 5.75E-72 T 12-10-2018 IPR011032 GroES-like superfamily M892_18030 ba28c878e7a6517967c20e79c84b6699 382 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 72 86 - T 12-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 M892_18030 ba28c878e7a6517967c20e79c84b6699 382 Gene3D G3DSA:3.90.180.10 17 375 2.1E-152 T 12-10-2018 M892_18030 ba28c878e7a6517967c20e79c84b6699 382 SUPERFAMILY SSF51735 171 345 3.32E-50 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_18030 ba28c878e7a6517967c20e79c84b6699 382 SUPERFAMILY SSF50129 329 379 5.65E-11 T 12-10-2018 IPR011032 GroES-like superfamily M892_18030 ba28c878e7a6517967c20e79c84b6699 382 SMART SM00829 23 378 0.0017 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 M892_18030 ba28c878e7a6517967c20e79c84b6699 382 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 39 165 1.0E-25 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 M892_18030 ba28c878e7a6517967c20e79c84b6699 382 Pfam PF00107 Zinc-binding dehydrogenase 208 337 2.0E-26 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 M892_05495 e8c0f4a109ed2b95399fe105549b89c2 179 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 177 3.6E-68 T 12-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA M892_05495 e8c0f4a109ed2b95399fe105549b89c2 179 SUPERFAMILY SSF53474 2 176 1.98E-5 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_05495 e8c0f4a109ed2b95399fe105549b89c2 179 Gene3D G3DSA:3.40.50.1820 1 179 1.8E-19 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_05495 e8c0f4a109ed2b95399fe105549b89c2 179 Hamap MF_01047 UPF0227 protein YcfP [ycfP]. 1 178 48.352 T 12-10-2018 IPR022987 Uncharacterised protein family UPF0227 M892_09825 1a3065641cf831dc11b7f9f01894a950 501 Gene3D G3DSA:3.40.50.300 228 501 5.5E-127 T 12-10-2018 M892_09825 1a3065641cf831dc11b7f9f01894a950 501 SMART SM00382 254 377 5.4E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_09825 1a3065641cf831dc11b7f9f01894a950 501 Pfam PF00437 Type II/IV secretion system protein 128 393 1.1E-91 T 12-10-2018 IPR001482 Type II/IV secretion system protein M892_09825 1a3065641cf831dc11b7f9f01894a950 501 SUPERFAMILY SSF160246 13 79 2.41E-17 T 12-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily M892_09825 1a3065641cf831dc11b7f9f01894a950 501 Gene3D G3DSA:3.30.450.90 89 226 1.1E-55 T 12-10-2018 M892_09825 1a3065641cf831dc11b7f9f01894a950 501 Gene3D G3DSA:3.30.300.160 1 79 3.4E-39 T 12-10-2018 M892_09825 1a3065641cf831dc11b7f9f01894a950 501 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 13 498 8.3E-228 T 12-10-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 M892_09825 1a3065641cf831dc11b7f9f01894a950 501 SUPERFAMILY SSF52540 108 498 1.27E-106 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_09825 1a3065641cf831dc11b7f9f01894a950 501 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 321 335 - T 12-10-2018 IPR001482 Type II/IV secretion system protein M892_15240 b04ca0c03f828335b2d83a8c02b5ca04 469 Gene3D G3DSA:3.40.50.2300 1 119 9.4E-34 T 12-10-2018 M892_15240 b04ca0c03f828335b2d83a8c02b5ca04 469 SUPERFAMILY SSF52540 135 370 1.11E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_15240 b04ca0c03f828335b2d83a8c02b5ca04 469 Gene3D G3DSA:3.40.50.300 120 300 5.1E-65 T 12-10-2018 M892_15240 b04ca0c03f828335b2d83a8c02b5ca04 469 SMART SM00448 4 115 3.0E-33 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_15240 b04ca0c03f828335b2d83a8c02b5ca04 469 Pfam PF02954 Bacterial regulatory protein, Fis family 420 459 1.3E-12 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M892_15240 b04ca0c03f828335b2d83a8c02b5ca04 469 Gene3D G3DSA:1.10.10.60 403 466 6.9E-10 T 12-10-2018 M892_15240 b04ca0c03f828335b2d83a8c02b5ca04 469 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 215 230 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 M892_15240 b04ca0c03f828335b2d83a8c02b5ca04 469 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 342 351 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site M892_15240 b04ca0c03f828335b2d83a8c02b5ca04 469 Pfam PF00158 Sigma-54 interaction domain 134 295 9.5E-66 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 M892_15240 b04ca0c03f828335b2d83a8c02b5ca04 469 SUPERFAMILY SSF46689 342 460 2.42E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_15240 b04ca0c03f828335b2d83a8c02b5ca04 469 Gene3D G3DSA:1.10.8.60 301 379 3.0E-30 T 12-10-2018 M892_15240 b04ca0c03f828335b2d83a8c02b5ca04 469 SMART SM00382 149 296 2.3E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_15240 b04ca0c03f828335b2d83a8c02b5ca04 469 SUPERFAMILY SSF52172 5 173 6.26E-40 T 12-10-2018 IPR011006 CheY-like superfamily M892_15240 b04ca0c03f828335b2d83a8c02b5ca04 469 Pfam PF00072 Response regulator receiver domain 6 115 2.2E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_14655 1c79010427b6c657dc43ef713624314f 403 TIGRFAM TIGR03392 FeS_syn_CsdA: cysteine desulfurase, catalytic subunit CsdA 2 403 5.0E-155 T 12-10-2018 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA GO:0016226|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 M892_14655 1c79010427b6c657dc43ef713624314f 403 SUPERFAMILY SSF53383 2 400 2.02E-125 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M892_14655 1c79010427b6c657dc43ef713624314f 403 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 216 235 - T 12-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site M892_14655 1c79010427b6c657dc43ef713624314f 403 Gene3D G3DSA:3.90.1150.10 7 395 6.5E-163 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M892_14655 1c79010427b6c657dc43ef713624314f 403 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 6 401 2.4E-167 T 12-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 M892_14655 1c79010427b6c657dc43ef713624314f 403 PIRSF PIRSF005572 21 403 2.9E-54 T 12-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 M892_14655 1c79010427b6c657dc43ef713624314f 403 Pfam PF00266 Aminotransferase class-V 24 392 4.0E-148 T 12-10-2018 IPR000192 Aminotransferase class V domain M892_14655 1c79010427b6c657dc43ef713624314f 403 Gene3D G3DSA:3.40.640.10 35 295 6.5E-163 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M892_00120 10539f51b74b5769d1e4bf84b2cd0154 401 Gene3D G3DSA:1.20.1720.10 6 385 1.3E-77 T 12-10-2018 M892_00120 10539f51b74b5769d1e4bf84b2cd0154 401 Pfam PF07690 Major Facilitator Superfamily 12 350 4.7E-39 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 M892_00120 10539f51b74b5769d1e4bf84b2cd0154 401 ProSitePatterns PS00216 Sugar transport proteins signature 1. 60 77 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 M892_00120 10539f51b74b5769d1e4bf84b2cd0154 401 SUPERFAMILY SSF103473 4 391 1.31E-52 T 12-10-2018 IPR036259 MFS transporter superfamily M892_23025 8c562f676e3255f280c571f14f416a47 475 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 1 472 3.3E-152 T 12-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 M892_23025 8c562f676e3255f280c571f14f416a47 475 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 246 430 2.3E-58 T 12-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 M892_23025 8c562f676e3255f280c571f14f416a47 475 Gene3D G3DSA:3.40.50.300 1 239 6.2E-54 T 12-10-2018 M892_23025 8c562f676e3255f280c571f14f416a47 475 SUPERFAMILY SSF52317 247 438 3.4E-37 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M892_23025 8c562f676e3255f280c571f14f416a47 475 SUPERFAMILY SSF52540 1 232 7.08E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_23025 8c562f676e3255f280c571f14f416a47 475 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 1 225 9.7E-22 T 12-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain M892_23025 8c562f676e3255f280c571f14f416a47 475 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 475 196.831 T 12-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 M892_23025 8c562f676e3255f280c571f14f416a47 475 Gene3D G3DSA:3.40.50.880 258 443 2.7E-20 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M892_11055 114df89d35492e545832a0f9361e423a 237 SUPERFAMILY SSF52343 104 235 5.89E-34 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain M892_11055 114df89d35492e545832a0f9361e423a 237 SUPERFAMILY SSF63380 2 101 5.18E-17 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel M892_11055 114df89d35492e545832a0f9361e423a 237 Gene3D G3DSA:2.40.30.10 1 102 1.2E-21 T 12-10-2018 M892_11055 114df89d35492e545832a0f9361e423a 237 Pfam PF00175 Oxidoreductase NAD-binding domain 112 215 1.7E-22 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 M892_11055 114df89d35492e545832a0f9361e423a 237 Gene3D G3DSA:3.40.50.80 103 237 1.2E-29 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain M892_11055 114df89d35492e545832a0f9361e423a 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 46 53 7.5E-14 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 M892_11055 114df89d35492e545832a0f9361e423a 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 95 104 7.5E-14 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 M892_11055 114df89d35492e545832a0f9361e423a 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 30 42 7.5E-14 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 M892_11055 114df89d35492e545832a0f9361e423a 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 111 130 7.5E-14 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 M892_11055 114df89d35492e545832a0f9361e423a 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 136 145 7.5E-14 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 M892_11720 ec78543cb871556413da3e36e1b05dbf 513 Pfam PF13005 zinc-finger binding domain of transposase IS66 120 164 1.6E-16 T 12-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 M892_11720 ec78543cb871556413da3e36e1b05dbf 513 Pfam PF13817 IS66 C-terminal element 473 509 7.6E-8 T 12-10-2018 IPR039552 Transposase IS66, C-terminal M892_11720 ec78543cb871556413da3e36e1b05dbf 513 Pfam PF03050 Transposase IS66 family 183 466 2.0E-101 T 12-10-2018 IPR004291 Transposase, IS66 M892_11720 ec78543cb871556413da3e36e1b05dbf 513 Pfam PF13007 Transposase C of IS166 homeodomain 42 112 2.2E-14 T 12-10-2018 IPR024463 Transposase TnpC, homeodomain M892_14065 31fd974c7805b0d253a2dc1f19a99307 658 SUPERFAMILY SSF52540 144 392 9.3E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_14065 31fd974c7805b0d253a2dc1f19a99307 658 Gene3D G3DSA:1.10.8.60 324 400 2.1E-27 T 12-10-2018 M892_14065 31fd974c7805b0d253a2dc1f19a99307 658 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 617 37.317 T 12-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 M892_14065 31fd974c7805b0d253a2dc1f19a99307 658 Pfam PF06480 FtsH Extracellular 5 94 1.0E-11 T 12-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 M892_14065 31fd974c7805b0d253a2dc1f19a99307 658 ProSitePatterns PS00674 AAA-protein family signature. 292 310 - T 12-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 M892_14065 31fd974c7805b0d253a2dc1f19a99307 658 SMART SM00382 185 324 5.1E-26 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_14065 31fd974c7805b0d253a2dc1f19a99307 658 Gene3D G3DSA:2.40.50.920 24 100 3.5E-29 T 12-10-2018 M892_14065 31fd974c7805b0d253a2dc1f19a99307 658 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 189 321 5.2E-46 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 M892_14065 31fd974c7805b0d253a2dc1f19a99307 658 Gene3D G3DSA:3.40.50.300 137 323 3.0E-70 T 12-10-2018 M892_14065 31fd974c7805b0d253a2dc1f19a99307 658 Gene3D G3DSA:1.20.58.760 403 604 1.8E-72 T 12-10-2018 M892_14065 31fd974c7805b0d253a2dc1f19a99307 658 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 102 594 7.1E-243 T 12-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 M892_14065 31fd974c7805b0d253a2dc1f19a99307 658 Pfam PF01434 Peptidase family M41 383 592 1.6E-81 T 12-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 M892_14065 31fd974c7805b0d253a2dc1f19a99307 658 SUPERFAMILY SSF140990 403 597 2.49E-75 T 12-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 M892_03080 da8ab9387921450964de6ab343a7bf10 367 ProSitePatterns PS01057 SAICAR synthetase signature 1. 124 138 - T 12-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 M892_03080 da8ab9387921450964de6ab343a7bf10 367 Pfam PF01259 SAICAR synthetase 22 293 1.9E-47 T 12-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 M892_03080 da8ab9387921450964de6ab343a7bf10 367 SUPERFAMILY SSF56104 14 343 1.24E-66 T 12-10-2018 M892_03080 da8ab9387921450964de6ab343a7bf10 367 TIGRFAM TIGR02735 purC_vibrio: phosphoribosylaminoimidazole-succinocarboxamide synthase 2 366 2.3E-213 T 12-10-2018 IPR014106 Phosphoribosylaminoimidazole-succinocarboxamide synthase, Vibrio-type GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 M892_03080 da8ab9387921450964de6ab343a7bf10 367 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 19 342 21.301 T 12-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 M892_03080 da8ab9387921450964de6ab343a7bf10 367 Gene3D G3DSA:3.30.200.20 12 129 1.7E-24 T 12-10-2018 M892_03080 da8ab9387921450964de6ab343a7bf10 367 Gene3D G3DSA:3.30.470.20 130 292 2.1E-14 T 12-10-2018 M892_11390 cb73a5da0732a1d298b7ccee04285232 101 Gene3D G3DSA:3.90.1490.10 5 97 3.8E-12 T 12-10-2018 M892_11390 cb73a5da0732a1d298b7ccee04285232 101 Pfam PF01902 Diphthamide synthase 5 89 6.5E-12 T 12-10-2018 IPR002761 Diphthamide synthase domain MetaCyc: PWY-6482|MetaCyc: PWY-7546|Reactome: R-HSA-5358493 M892_11390 cb73a5da0732a1d298b7ccee04285232 101 SUPERFAMILY SSF52402 1 96 5.02E-22 T 12-10-2018 M892_17315 660048880ef93fe5e17fd350a3115554 218 Gene3D G3DSA:3.60.15.10 3 213 1.7E-75 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like M892_17315 660048880ef93fe5e17fd350a3115554 218 Pfam PF00753 Metallo-beta-lactamase superfamily 14 195 4.8E-28 T 12-10-2018 IPR001279 Metallo-beta-lactamase M892_17315 660048880ef93fe5e17fd350a3115554 218 SUPERFAMILY SSF56281 5 211 6.09E-53 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like M892_17315 660048880ef93fe5e17fd350a3115554 218 SMART SM00849 14 195 3.7E-37 T 12-10-2018 IPR001279 Metallo-beta-lactamase M892_11765 e74203a121d384265b455d247439f82e 650 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 644 0.0 T 12-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 M892_11765 e74203a121d384265b455d247439f82e 650 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 12-10-2018 IPR020845 AMP-binding, conserved site M892_11765 e74203a121d384265b455d247439f82e 650 Pfam PF00501 AMP-binding enzyme 84 523 3.2E-90 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 M892_11765 e74203a121d384265b455d247439f82e 650 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 646 52.381 T 12-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 M892_11765 e74203a121d384265b455d247439f82e 650 Gene3D G3DSA:3.30.300.30 519 650 5.6E-31 T 12-10-2018 M892_11765 e74203a121d384265b455d247439f82e 650 Gene3D G3DSA:3.40.50.12780 50 516 1.8E-102 T 12-10-2018 M892_11765 e74203a121d384265b455d247439f82e 650 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 81 4.6E-20 T 12-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 M892_11765 e74203a121d384265b455d247439f82e 650 SUPERFAMILY SSF56801 8 644 1.96E-180 T 12-10-2018 M892_11765 e74203a121d384265b455d247439f82e 650 Pfam PF13193 AMP-binding enzyme C-terminal domain 532 610 4.9E-26 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain M892_09255 bfa74872061462d0a271ab6037b5439b 443 SMART SM01086 335 429 2.1E-19 T 12-10-2018 IPR019489 Clp ATPase, C-terminal M892_09255 bfa74872061462d0a271ab6037b5439b 443 Pfam PF07724 AAA domain (Cdc48 subfamily) 171 329 5.8E-43 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 M892_09255 bfa74872061462d0a271ab6037b5439b 443 SMART SM00382 49 332 5.6E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_09255 bfa74872061462d0a271ab6037b5439b 443 SUPERFAMILY SSF52540 3 441 4.13E-95 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_09255 bfa74872061462d0a271ab6037b5439b 443 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 335 404 1.5E-4 T 12-10-2018 IPR019489 Clp ATPase, C-terminal M892_09255 bfa74872061462d0a271ab6037b5439b 443 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 443 1.3E-221 T 12-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 M892_09255 bfa74872061462d0a271ab6037b5439b 443 Gene3D G3DSA:1.10.8.60 335 440 2.7E-39 T 12-10-2018 M892_09255 bfa74872061462d0a271ab6037b5439b 443 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 104 7.5E-7 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 M892_09255 bfa74872061462d0a271ab6037b5439b 443 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 443 43.098 T 12-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 M892_09560 fab8d008785277d31fd53f576838b10d 269 SUPERFAMILY SSF46946 130 221 7.72E-31 T 12-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 M892_09560 fab8d008785277d31fd53f576838b10d 269 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 4.2E-32 T 12-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 M892_09560 fab8d008785277d31fd53f576838b10d 269 ProSitePatterns PS01242 Zinc finger FPG-type signature. 244 268 - T 12-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 M892_09560 fab8d008785277d31fd53f576838b10d 269 SMART SM00898 2 115 1.4E-53 T 12-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 M892_09560 fab8d008785277d31fd53f576838b10d 269 Pfam PF06827 Zinc finger found in FPG and IleRS 241 269 4.9E-9 T 12-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 M892_09560 fab8d008785277d31fd53f576838b10d 269 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 129 218 6.0E-29 T 12-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 M892_09560 fab8d008785277d31fd53f576838b10d 269 SUPERFAMILY SSF81624 2 138 1.31E-41 T 12-10-2018 IPR035937 MutM-like, N-terminal M892_09560 fab8d008785277d31fd53f576838b10d 269 SMART SM01232 129 221 4.8E-47 T 12-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 M892_09560 fab8d008785277d31fd53f576838b10d 269 SUPERFAMILY SSF57716 217 269 2.85E-16 T 12-10-2018 M892_09560 fab8d008785277d31fd53f576838b10d 269 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 268 1.1E-95 T 12-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 M892_09560 fab8d008785277d31fd53f576838b10d 269 Gene3D G3DSA:3.20.190.10 2 128 1.9E-42 T 12-10-2018 IPR035937 MutM-like, N-terminal M892_09560 fab8d008785277d31fd53f576838b10d 269 Gene3D G3DSA:1.10.8.50 131 269 1.6E-47 T 12-10-2018 M892_09560 fab8d008785277d31fd53f576838b10d 269 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 269 43.672 T 12-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 M892_09835 671a61bff2ad994958ab0c9af4b6a5bb 307 Gene3D G3DSA:2.30.30.830 111 178 1.2E-28 T 12-10-2018 M892_09835 671a61bff2ad994958ab0c9af4b6a5bb 307 ProSitePatterns PS01141 Bacterial type II secretion system protein C signature. 245 271 - T 12-10-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 M892_09835 671a61bff2ad994958ab0c9af4b6a5bb 307 Gene3D G3DSA:2.30.42.10 203 307 2.5E-26 T 12-10-2018 M892_09835 671a61bff2ad994958ab0c9af4b6a5bb 307 TIGRFAM TIGR01713 typeII_sec_gspC: type II secretion system protein C 34 307 1.1E-73 T 12-10-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 M892_09835 671a61bff2ad994958ab0c9af4b6a5bb 307 Pfam PF11356 Type II secretion system protein C 37 177 1.0E-44 T 12-10-2018 IPR024961 Type II secretion system protein C, N-terminal M892_09835 671a61bff2ad994958ab0c9af4b6a5bb 307 SUPERFAMILY SSF50156 211 307 1.97E-18 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 M892_07790 faeafc882f1724108d93538287e87594 84 Pfam PF00037 4Fe-4S binding domain 5 25 5.8E-6 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M892_07790 faeafc882f1724108d93538287e87594 84 Gene3D G3DSA:3.30.70.20 2 83 1.6E-33 T 12-10-2018 M892_07790 faeafc882f1724108d93538287e87594 84 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M892_07790 faeafc882f1724108d93538287e87594 84 SUPERFAMILY SSF54862 4 72 4.93E-17 T 12-10-2018 M892_02800 a8b0178bf25965c25cc5f99f95c631bd 557 SMART SM00382 345 535 5.6E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_02800 a8b0178bf25965c25cc5f99f95c631bd 557 Gene3D G3DSA:1.20.1560.10 15 309 1.7E-7 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 M892_02800 a8b0178bf25965c25cc5f99f95c631bd 557 ProSitePatterns PS00211 ABC transporters family signature. 457 471 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_02800 a8b0178bf25965c25cc5f99f95c631bd 557 Gene3D G3DSA:3.40.50.300 321 555 8.6E-60 T 12-10-2018 M892_02800 a8b0178bf25965c25cc5f99f95c631bd 557 SUPERFAMILY SSF52540 319 522 4.57E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_02800 a8b0178bf25965c25cc5f99f95c631bd 557 Pfam PF00005 ABC transporter 337 485 9.9E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_02800 a8b0178bf25965c25cc5f99f95c631bd 557 SUPERFAMILY SSF90123 53 469 2.35E-14 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 M892_09555 de8549e1f67e7ca64a83631c2453317d 308 Pfam PF05686 Glycosyl transferase family 90 138 283 7.7E-14 T 12-10-2018 IPR006598 Lipopolysaccharide-modifying protein M892_09555 de8549e1f67e7ca64a83631c2453317d 308 SMART SM00672 102 302 2.5E-4 T 12-10-2018 IPR006598 Lipopolysaccharide-modifying protein M892_04000 3ec70d9584ad1b3dfb8492eb521fdc25 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 2 238 2.0E-77 T 12-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 M892_04000 3ec70d9584ad1b3dfb8492eb521fdc25 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 1 241 34.589 T 12-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 M892_04000 3ec70d9584ad1b3dfb8492eb521fdc25 245 Gene3D G3DSA:3.20.20.70 1 245 2.5E-88 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M892_04000 3ec70d9584ad1b3dfb8492eb521fdc25 245 SUPERFAMILY SSF51366 2 242 2.62E-63 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 M892_04000 3ec70d9584ad1b3dfb8492eb521fdc25 245 Pfam PF00977 Histidine biosynthesis protein 2 234 1.4E-75 T 12-10-2018 IPR006062 Histidine biosynthesis GO:0000105 M892_12120 2b7744ef74b8fe0a5c4dededbf57506d 154 Gene3D G3DSA:3.40.50.300 2 153 2.5E-49 T 12-10-2018 M892_12120 2b7744ef74b8fe0a5c4dededbf57506d 154 SUPERFAMILY SSF52540 27 152 3.05E-24 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_12120 2b7744ef74b8fe0a5c4dededbf57506d 154 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 139 1.8E-53 T 12-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 M892_12120 2b7744ef74b8fe0a5c4dededbf57506d 154 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 133 2.8E-43 T 12-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 M892_21040 cfa10aa054d2539bad8870f580b31bec 423 Gene3D G3DSA:3.30.450.380 1 166 7.2E-42 T 12-10-2018 M892_21040 cfa10aa054d2539bad8870f580b31bec 423 SMART SM00382 195 349 0.0019 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_21040 cfa10aa054d2539bad8870f580b31bec 423 Pfam PF00437 Type II/IV secretion system protein 71 347 1.7E-79 T 12-10-2018 IPR001482 Type II/IV secretion system protein M892_21040 cfa10aa054d2539bad8870f580b31bec 423 SUPERFAMILY SSF52540 57 375 1.97E-64 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_21040 cfa10aa054d2539bad8870f580b31bec 423 Gene3D G3DSA:3.40.50.300 168 418 7.2E-73 T 12-10-2018 M892_17780 ea399474f11e19f321339a568d717bc5 183 Pfam PF06527 TniQ 6 129 8.0E-13 T 12-10-2018 IPR009492 TniQ M892_00985 0cf7dcadece4b6b6d17826fb56b65464 430 Pfam PF08388 Group II intron, maturase-specific domain 288 355 2.8E-14 T 12-10-2018 IPR013597 Group II intron, maturase-specific M892_00985 0cf7dcadece4b6b6d17826fb56b65464 430 SUPERFAMILY SSF56672 15 355 4.0E-51 T 12-10-2018 M892_00985 0cf7dcadece4b6b6d17826fb56b65464 430 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 8 350 2.2E-118 T 12-10-2018 IPR030931 Group II intron reverse transcriptase/maturase M892_00985 0cf7dcadece4b6b6d17826fb56b65464 430 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 61 74 3.0E-6 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M892_00985 0cf7dcadece4b6b6d17826fb56b65464 430 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 187 200 3.0E-6 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M892_00985 0cf7dcadece4b6b6d17826fb56b65464 430 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 129 147 3.0E-6 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M892_00985 0cf7dcadece4b6b6d17826fb56b65464 430 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 66 272 2.8E-42 T 12-10-2018 IPR000477 Reverse transcriptase domain M892_22205 4ae50679e24067416e4de57fdba20f51 430 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 8 350 2.2E-118 T 12-10-2018 IPR030931 Group II intron reverse transcriptase/maturase M892_22205 4ae50679e24067416e4de57fdba20f51 430 SUPERFAMILY SSF56672 15 360 3.11E-51 T 12-10-2018 M892_22205 4ae50679e24067416e4de57fdba20f51 430 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 61 74 3.0E-6 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M892_22205 4ae50679e24067416e4de57fdba20f51 430 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 187 200 3.0E-6 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M892_22205 4ae50679e24067416e4de57fdba20f51 430 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 129 147 3.0E-6 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M892_22205 4ae50679e24067416e4de57fdba20f51 430 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 66 272 2.8E-42 T 12-10-2018 IPR000477 Reverse transcriptase domain M892_22205 4ae50679e24067416e4de57fdba20f51 430 Pfam PF08388 Group II intron, maturase-specific domain 288 356 2.5E-14 T 12-10-2018 IPR013597 Group II intron, maturase-specific M892_16320 bb2531d8cf652e7ef3090a0154944ae7 279 SUPERFAMILY SSF46785 12 74 9.45E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_16320 bb2531d8cf652e7ef3090a0154944ae7 279 SUPERFAMILY SSF48008 79 270 1.7E-56 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal M892_16320 bb2531d8cf652e7ef3090a0154944ae7 279 TIGRFAM TIGR02812 fadR_gamma: fatty acid metabolism transcriptional regulator FadR 2 276 1.2E-114 T 12-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 M892_16320 bb2531d8cf652e7ef3090a0154944ae7 279 Pfam PF07840 FadR C-terminal domain 72 274 1.5E-69 T 12-10-2018 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 M892_16320 bb2531d8cf652e7ef3090a0154944ae7 279 Gene3D G3DSA:1.10.10.10 1 79 1.3E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_16320 bb2531d8cf652e7ef3090a0154944ae7 279 SMART SM00345 12 71 1.6E-22 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M892_16320 bb2531d8cf652e7ef3090a0154944ae7 279 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 71 3.1E-20 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M892_16320 bb2531d8cf652e7ef3090a0154944ae7 279 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 3.5E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M892_16320 bb2531d8cf652e7ef3090a0154944ae7 279 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 3.5E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M892_16320 bb2531d8cf652e7ef3090a0154944ae7 279 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 279 138.156 T 12-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 M892_25195 abe75f5bf9d67aa0a02d128f369ed042 113 Gene3D G3DSA:3.10.129.10 2 110 2.2E-30 T 12-10-2018 M892_25195 abe75f5bf9d67aa0a02d128f369ed042 113 Pfam PF03061 Thioesterase superfamily 22 97 3.1E-17 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 M892_25195 abe75f5bf9d67aa0a02d128f369ed042 113 SUPERFAMILY SSF54637 8 97 2.35E-27 T 12-10-2018 IPR029069 HotDog domain superfamily M892_06435 589015fdfae93210b050e16c41e1a814 304 Pfam PF01145 SPFH domain / Band 7 family 26 195 6.2E-34 T 12-10-2018 IPR001107 Band 7 domain M892_06435 589015fdfae93210b050e16c41e1a814 304 SUPERFAMILY SSF117892 53 187 9.42E-41 T 12-10-2018 IPR036013 Band 7/SPFH domain superfamily M892_06435 589015fdfae93210b050e16c41e1a814 304 SMART SM00244 22 180 1.7E-59 T 12-10-2018 IPR001107 Band 7 domain M892_06435 589015fdfae93210b050e16c41e1a814 304 PRINTS PR00721 Stomatin signature 175 196 2.3E-28 T 12-10-2018 IPR001972 Stomatin family GO:0016020 M892_06435 589015fdfae93210b050e16c41e1a814 304 PRINTS PR00721 Stomatin signature 132 155 2.3E-28 T 12-10-2018 IPR001972 Stomatin family GO:0016020 M892_06435 589015fdfae93210b050e16c41e1a814 304 PRINTS PR00721 Stomatin signature 77 98 2.3E-28 T 12-10-2018 IPR001972 Stomatin family GO:0016020 M892_06435 589015fdfae93210b050e16c41e1a814 304 PRINTS PR00721 Stomatin signature 112 129 2.3E-28 T 12-10-2018 IPR001972 Stomatin family GO:0016020 M892_06435 589015fdfae93210b050e16c41e1a814 304 PRINTS PR00721 Stomatin signature 156 174 2.3E-28 T 12-10-2018 IPR001972 Stomatin family GO:0016020 M892_06435 589015fdfae93210b050e16c41e1a814 304 Gene3D G3DSA:3.30.479.30 50 182 2.6E-42 T 12-10-2018 M892_06435 589015fdfae93210b050e16c41e1a814 304 ProSitePatterns PS01270 Band 7 protein family signature. 136 164 - T 12-10-2018 IPR018080 Band 7/stomatin-like, conserved site M892_07730 4f4ba48041adc668a84a5571a1bc5abd 162 Gene3D G3DSA:1.10.10.10 24 78 9.6E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_07730 4f4ba48041adc668a84a5571a1bc5abd 162 Pfam PF13551 Winged helix-turn helix 24 83 1.1E-13 T 12-10-2018 M892_07730 4f4ba48041adc668a84a5571a1bc5abd 162 SUPERFAMILY SSF46689 16 132 1.25E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_07730 4f4ba48041adc668a84a5571a1bc5abd 162 Pfam PF13592 Winged helix-turn helix 99 156 9.7E-14 T 12-10-2018 IPR025959 Winged helix-turn helix domain M892_02485 4f4ba48041adc668a84a5571a1bc5abd 162 Gene3D G3DSA:1.10.10.10 24 78 9.6E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_02485 4f4ba48041adc668a84a5571a1bc5abd 162 Pfam PF13551 Winged helix-turn helix 24 83 1.1E-13 T 12-10-2018 M892_02485 4f4ba48041adc668a84a5571a1bc5abd 162 SUPERFAMILY SSF46689 16 132 1.25E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_02485 4f4ba48041adc668a84a5571a1bc5abd 162 Pfam PF13592 Winged helix-turn helix 99 156 9.7E-14 T 12-10-2018 IPR025959 Winged helix-turn helix domain M892_12640 4f4ba48041adc668a84a5571a1bc5abd 162 Gene3D G3DSA:1.10.10.10 24 78 9.6E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_12640 4f4ba48041adc668a84a5571a1bc5abd 162 Pfam PF13551 Winged helix-turn helix 24 83 1.1E-13 T 12-10-2018 M892_12640 4f4ba48041adc668a84a5571a1bc5abd 162 SUPERFAMILY SSF46689 16 132 1.25E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_12640 4f4ba48041adc668a84a5571a1bc5abd 162 Pfam PF13592 Winged helix-turn helix 99 156 9.7E-14 T 12-10-2018 IPR025959 Winged helix-turn helix domain M892_11090 4f4ba48041adc668a84a5571a1bc5abd 162 Gene3D G3DSA:1.10.10.10 24 78 9.6E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_11090 4f4ba48041adc668a84a5571a1bc5abd 162 Pfam PF13551 Winged helix-turn helix 24 83 1.1E-13 T 12-10-2018 M892_11090 4f4ba48041adc668a84a5571a1bc5abd 162 SUPERFAMILY SSF46689 16 132 1.25E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_11090 4f4ba48041adc668a84a5571a1bc5abd 162 Pfam PF13592 Winged helix-turn helix 99 156 9.7E-14 T 12-10-2018 IPR025959 Winged helix-turn helix domain M892_11690 4f4ba48041adc668a84a5571a1bc5abd 162 Gene3D G3DSA:1.10.10.10 24 78 9.6E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_11690 4f4ba48041adc668a84a5571a1bc5abd 162 Pfam PF13551 Winged helix-turn helix 24 83 1.1E-13 T 12-10-2018 M892_11690 4f4ba48041adc668a84a5571a1bc5abd 162 SUPERFAMILY SSF46689 16 132 1.25E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_11690 4f4ba48041adc668a84a5571a1bc5abd 162 Pfam PF13592 Winged helix-turn helix 99 156 9.7E-14 T 12-10-2018 IPR025959 Winged helix-turn helix domain M892_07820 4f4ba48041adc668a84a5571a1bc5abd 162 Gene3D G3DSA:1.10.10.10 24 78 9.6E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_07820 4f4ba48041adc668a84a5571a1bc5abd 162 Pfam PF13551 Winged helix-turn helix 24 83 1.1E-13 T 12-10-2018 M892_07820 4f4ba48041adc668a84a5571a1bc5abd 162 SUPERFAMILY SSF46689 16 132 1.25E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_07820 4f4ba48041adc668a84a5571a1bc5abd 162 Pfam PF13592 Winged helix-turn helix 99 156 9.7E-14 T 12-10-2018 IPR025959 Winged helix-turn helix domain M892_07810 4f4ba48041adc668a84a5571a1bc5abd 162 Gene3D G3DSA:1.10.10.10 24 78 9.6E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_07810 4f4ba48041adc668a84a5571a1bc5abd 162 Pfam PF13551 Winged helix-turn helix 24 83 1.1E-13 T 12-10-2018 M892_07810 4f4ba48041adc668a84a5571a1bc5abd 162 SUPERFAMILY SSF46689 16 132 1.25E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_07810 4f4ba48041adc668a84a5571a1bc5abd 162 Pfam PF13592 Winged helix-turn helix 99 156 9.7E-14 T 12-10-2018 IPR025959 Winged helix-turn helix domain M892_11100 4f4ba48041adc668a84a5571a1bc5abd 162 Gene3D G3DSA:1.10.10.10 24 78 9.6E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_11100 4f4ba48041adc668a84a5571a1bc5abd 162 Pfam PF13551 Winged helix-turn helix 24 83 1.1E-13 T 12-10-2018 M892_11100 4f4ba48041adc668a84a5571a1bc5abd 162 SUPERFAMILY SSF46689 16 132 1.25E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_11100 4f4ba48041adc668a84a5571a1bc5abd 162 Pfam PF13592 Winged helix-turn helix 99 156 9.7E-14 T 12-10-2018 IPR025959 Winged helix-turn helix domain M892_10405 4f4ba48041adc668a84a5571a1bc5abd 162 Gene3D G3DSA:1.10.10.10 24 78 9.6E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_10405 4f4ba48041adc668a84a5571a1bc5abd 162 Pfam PF13551 Winged helix-turn helix 24 83 1.1E-13 T 12-10-2018 M892_10405 4f4ba48041adc668a84a5571a1bc5abd 162 SUPERFAMILY SSF46689 16 132 1.25E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_10405 4f4ba48041adc668a84a5571a1bc5abd 162 Pfam PF13592 Winged helix-turn helix 99 156 9.7E-14 T 12-10-2018 IPR025959 Winged helix-turn helix domain M892_10885 4f4ba48041adc668a84a5571a1bc5abd 162 Gene3D G3DSA:1.10.10.10 24 78 9.6E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_10885 4f4ba48041adc668a84a5571a1bc5abd 162 Pfam PF13551 Winged helix-turn helix 24 83 1.1E-13 T 12-10-2018 M892_10885 4f4ba48041adc668a84a5571a1bc5abd 162 SUPERFAMILY SSF46689 16 132 1.25E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_10885 4f4ba48041adc668a84a5571a1bc5abd 162 Pfam PF13592 Winged helix-turn helix 99 156 9.7E-14 T 12-10-2018 IPR025959 Winged helix-turn helix domain M892_01060 2fec282c4adf139bd3a820e97297d986 489 Gene3D G3DSA:3.10.40.10 22 111 1.0E-30 T 12-10-2018 IPR037015 Aerolysin/Pertussis toxin (APT), N-terminal domain superfamily M892_01060 2fec282c4adf139bd3a820e97297d986 489 Gene3D G3DSA:2.170.15.10 198 440 6.0E-117 T 12-10-2018 M892_01060 2fec282c4adf139bd3a820e97297d986 489 Gene3D G3DSA:3.30.412.10 120 417 6.0E-117 T 12-10-2018 M892_01060 2fec282c4adf139bd3a820e97297d986 489 Pfam PF01117 Aerolysin toxin 118 445 1.0E-93 T 12-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 M892_01060 2fec282c4adf139bd3a820e97297d986 489 PRINTS PR00754 Aerolysin signature 401 419 5.5E-53 T 12-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 M892_01060 2fec282c4adf139bd3a820e97297d986 489 PRINTS PR00754 Aerolysin signature 420 439 5.5E-53 T 12-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 M892_01060 2fec282c4adf139bd3a820e97297d986 489 PRINTS PR00754 Aerolysin signature 44 62 5.5E-53 T 12-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 M892_01060 2fec282c4adf139bd3a820e97297d986 489 PRINTS PR00754 Aerolysin signature 63 82 5.5E-53 T 12-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 M892_01060 2fec282c4adf139bd3a820e97297d986 489 PRINTS PR00754 Aerolysin signature 138 160 5.5E-53 T 12-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 M892_01060 2fec282c4adf139bd3a820e97297d986 489 PRINTS PR00754 Aerolysin signature 262 286 5.5E-53 T 12-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 M892_01060 2fec282c4adf139bd3a820e97297d986 489 PRINTS PR00754 Aerolysin signature 379 398 5.5E-53 T 12-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 M892_01060 2fec282c4adf139bd3a820e97297d986 489 PRINTS PR00754 Aerolysin signature 334 357 5.5E-53 T 12-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 M892_01060 2fec282c4adf139bd3a820e97297d986 489 SUPERFAMILY SSF56973 116 442 4.97E-66 T 12-10-2018 M892_01060 2fec282c4adf139bd3a820e97297d986 489 SMART SM00999 117 475 3.9E-268 T 12-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 M892_01060 2fec282c4adf139bd3a820e97297d986 489 SUPERFAMILY SSF56436 24 105 1.38E-32 T 12-10-2018 IPR016187 C-type lectin fold M892_01060 2fec282c4adf139bd3a820e97297d986 489 Pfam PF03440 Aerolysin/Pertussis toxin (APT) domain 24 100 6.3E-10 T 12-10-2018 IPR005138 Aerolysin/Pertussis toxin domain M892_14730 52135c4d8334274881c2af60f4f776bb 261 Pfam PF04205 FMN-binding domain 148 243 8.7E-14 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 M892_14730 52135c4d8334274881c2af60f4f776bb 261 SMART SM00900 148 246 4.1E-31 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 M892_14730 52135c4d8334274881c2af60f4f776bb 261 PIRSF PIRSF009437 1 261 4.1E-102 T 12-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 M892_14730 52135c4d8334274881c2af60f4f776bb 261 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 5 254 5.3E-97 T 12-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 M892_14730 52135c4d8334274881c2af60f4f776bb 261 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 6 258 35.197 T 12-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 M892_22095 9b52b7161be00d270035e0838bf5455b 582 Gene3D G3DSA:3.10.410.10 469 558 9.3E-30 T 12-10-2018 M892_22095 9b52b7161be00d270035e0838bf5455b 582 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 1 582 42.665 T 12-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 M892_22095 9b52b7161be00d270035e0838bf5455b 582 Gene3D G3DSA:3.40.50.300 6 464 8.4E-188 T 12-10-2018 M892_22095 9b52b7161be00d270035e0838bf5455b 582 SUPERFAMILY SSF52540 4 580 6.37E-216 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_22095 9b52b7161be00d270035e0838bf5455b 582 ProSitePatterns PS00722 Formate--tetrahydrofolate ligase signature 2. 345 356 - T 12-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 M892_22095 9b52b7161be00d270035e0838bf5455b 582 Gene3D G3DSA:3.30.1510.10 129 264 8.4E-188 T 12-10-2018 M892_22095 9b52b7161be00d270035e0838bf5455b 582 Pfam PF01268 Formate--tetrahydrofolate ligase 3 581 1.8E-239 T 12-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 M892_22095 9b52b7161be00d270035e0838bf5455b 582 ProSitePatterns PS00721 Formate--tetrahydrofolate ligase signature 1. 103 113 - T 12-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 M892_22415 3e93a845acdacfd1325c1266904080b8 136 Gene3D G3DSA:3.10.450.40 6 117 2.3E-11 T 12-10-2018 M892_22415 3e93a845acdacfd1325c1266904080b8 136 Pfam PF04965 Gene 25-like lysozyme 28 115 4.6E-18 T 12-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD M892_22415 3e93a845acdacfd1325c1266904080b8 136 SUPERFAMILY SSF160719 28 131 1.11E-20 T 12-10-2018 M892_22415 3e93a845acdacfd1325c1266904080b8 136 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 6 136 2.5E-38 T 12-10-2018 IPR017737 Type VI secretion system, lysozyme-related protein M892_12160 ffbc50cdfa3ccf4676bba67c51639e33 61 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 5 59 5.7E-23 T 12-10-2018 IPR019201 Protein of unknown function DUF2065 M892_12520 172c44b6db02fe4c0a08641ec7d7996e 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 73 9.0E-24 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_12520 172c44b6db02fe4c0a08641ec7d7996e 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 73 6.2E-38 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_12520 172c44b6db02fe4c0a08641ec7d7996e 75 Pfam PF01084 Ribosomal protein S18 19 68 2.8E-25 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_12520 172c44b6db02fe4c0a08641ec7d7996e 75 Gene3D G3DSA:4.10.640.10 20 75 7.8E-29 T 12-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_12520 172c44b6db02fe4c0a08641ec7d7996e 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 12-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_12520 172c44b6db02fe4c0a08641ec7d7996e 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 21.42 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_12520 172c44b6db02fe4c0a08641ec7d7996e 75 SUPERFAMILY SSF46911 3 74 2.49E-29 T 12-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_12520 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 1.6E-18 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_12520 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 1.6E-18 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_12520 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 1.6E-18 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_12520 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 1.6E-18 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_03100 3baaa2874394dd47138ab2d7e586f169 784 Pfam PF00271 Helicase conserved C-terminal domain 197 314 5.0E-15 T 12-10-2018 IPR001650 Helicase, C-terminal M892_03100 3baaa2874394dd47138ab2d7e586f169 784 Gene3D G3DSA:1.20.120.1080 356 450 1.9E-6 T 12-10-2018 M892_03100 3baaa2874394dd47138ab2d7e586f169 784 SMART SM00490 219 315 4.0E-14 T 12-10-2018 IPR001650 Helicase, C-terminal M892_03100 3baaa2874394dd47138ab2d7e586f169 784 Pfam PF00270 DEAD/DEAH box helicase 13 152 2.9E-8 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 M892_03100 3baaa2874394dd47138ab2d7e586f169 784 SMART SM00487 1 174 7.4E-15 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain M892_03100 3baaa2874394dd47138ab2d7e586f169 784 Pfam PF04408 Helicase associated domain (HA2) 373 444 5.3E-6 T 12-10-2018 IPR007502 Helicase-associated domain GO:0004386 M892_03100 3baaa2874394dd47138ab2d7e586f169 784 Gene3D G3DSA:3.40.50.300 168 331 4.3E-43 T 12-10-2018 M892_03100 3baaa2874394dd47138ab2d7e586f169 784 Gene3D G3DSA:3.40.50.300 1 163 6.2E-42 T 12-10-2018 M892_03100 3baaa2874394dd47138ab2d7e586f169 784 SUPERFAMILY SSF52540 16 326 2.2E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_18105 e3fb106714872c4c6df1bd3fa675f91b 204 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 9 196 5.2E-35 T 12-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like M892_18105 e3fb106714872c4c6df1bd3fa675f91b 204 Pfam PF12710 haloacid dehalogenase-like hydrolase 10 190 1.6E-29 T 12-10-2018 M892_18105 e3fb106714872c4c6df1bd3fa675f91b 204 Gene3D G3DSA:1.20.1440.100 21 93 9.7E-34 T 12-10-2018 M892_18105 e3fb106714872c4c6df1bd3fa675f91b 204 SUPERFAMILY SSF56784 6 194 2.1E-21 T 12-10-2018 IPR036412 HAD-like superfamily M892_18105 e3fb106714872c4c6df1bd3fa675f91b 204 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 9 192 5.1E-25 T 12-10-2018 M892_18105 e3fb106714872c4c6df1bd3fa675f91b 204 Gene3D G3DSA:3.40.50.1000 9 196 9.7E-34 T 12-10-2018 IPR023214 HAD superfamily M892_07280 3ba7140fa4de9650a9705dc54d94ee95 198 SUPERFAMILY SSF51064 143 198 2.22E-19 T 12-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 M892_07280 3ba7140fa4de9650a9705dc54d94ee95 198 SUPERFAMILY SSF58014 44 142 2.09E-29 T 12-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 M892_07280 3ba7140fa4de9650a9705dc54d94ee95 198 PRINTS PR00773 GrpE protein signature 95 110 4.4E-29 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 M892_07280 3ba7140fa4de9650a9705dc54d94ee95 198 PRINTS PR00773 GrpE protein signature 67 83 4.4E-29 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 M892_07280 3ba7140fa4de9650a9705dc54d94ee95 198 PRINTS PR00773 GrpE protein signature 177 196 4.4E-29 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 M892_07280 3ba7140fa4de9650a9705dc54d94ee95 198 PRINTS PR00773 GrpE protein signature 150 165 4.4E-29 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 M892_07280 3ba7140fa4de9650a9705dc54d94ee95 198 Pfam PF01025 GrpE 40 198 3.3E-55 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 M892_07280 3ba7140fa4de9650a9705dc54d94ee95 198 ProSitePatterns PS01071 grpE protein signature. 153 196 - T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 M892_07280 3ba7140fa4de9650a9705dc54d94ee95 198 Gene3D G3DSA:3.90.20.20 35 141 2.3E-32 T 12-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 M892_07280 3ba7140fa4de9650a9705dc54d94ee95 198 Gene3D G3DSA:2.30.22.10 142 198 2.0E-25 T 12-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 M892_07280 3ba7140fa4de9650a9705dc54d94ee95 198 Hamap MF_01151 Protein GrpE [grpE]. 2 198 22.584 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 M892_15570 e270a2f30660f5c79dd76dc9b4177ec3 163 Pfam PF02674 Colicin V production protein 4 142 2.7E-36 T 12-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 M892_22980 211b8ce3a63f31d8a799c3db9ac9f4e7 518 Gene3D G3DSA:3.40.50.720 3 371 2.0E-155 T 12-10-2018 M892_22980 211b8ce3a63f31d8a799c3db9ac9f4e7 518 TIGRFAM TIGR00561 pntA: NAD(P)(+) transhydrogenase (AB-specific), alpha subunit 2 516 1.0E-270 T 12-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 M892_22980 211b8ce3a63f31d8a799c3db9ac9f4e7 518 PIRSF PIRSF000203 1 516 9.1E-269 T 12-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 M892_22980 211b8ce3a63f31d8a799c3db9ac9f4e7 518 SUPERFAMILY SSF52283 2 174 2.13E-51 T 12-10-2018 M892_22980 211b8ce3a63f31d8a799c3db9ac9f4e7 518 SUPERFAMILY SSF51735 143 319 9.24E-36 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_22980 211b8ce3a63f31d8a799c3db9ac9f4e7 518 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 433 516 2.0E-36 T 12-10-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 M892_22980 211b8ce3a63f31d8a799c3db9ac9f4e7 518 SMART SM01002 152 317 1.2E-80 T 12-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain M892_22980 211b8ce3a63f31d8a799c3db9ac9f4e7 518 SMART SM01003 4 143 1.1E-67 T 12-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal M892_22980 211b8ce3a63f31d8a799c3db9ac9f4e7 518 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 143 3.9E-46 T 12-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal M892_22980 211b8ce3a63f31d8a799c3db9ac9f4e7 518 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 12-10-2018 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 Reactome: R-HSA-71403 M892_22980 211b8ce3a63f31d8a799c3db9ac9f4e7 518 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 147 374 3.2E-73 T 12-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain M892_22980 211b8ce3a63f31d8a799c3db9ac9f4e7 518 Gene3D G3DSA:3.40.50.720 143 324 2.0E-155 T 12-10-2018 M892_16150 89c515917b469a84fb9026f9b85fdde9 197 Gene3D G3DSA:3.30.70.20 136 186 5.4E-9 T 12-10-2018 M892_16150 89c515917b469a84fb9026f9b85fdde9 197 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 1 187 5.5E-87 T 12-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 M892_16150 89c515917b469a84fb9026f9b85fdde9 197 Pfam PF04060 Putative Fe-S cluster 44 75 7.0E-15 T 12-10-2018 IPR007202 4Fe-4S domain GO:0051536 M892_16150 89c515917b469a84fb9026f9b85fdde9 197 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 144 155 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M892_16150 89c515917b469a84fb9026f9b85fdde9 197 SUPERFAMILY SSF54862 37 173 1.07E-30 T 12-10-2018 M892_16150 89c515917b469a84fb9026f9b85fdde9 197 Hamap MF_00463 Ion-translocating oxidoreductase complex subunit B [rsxB]. 4 166 26.163 T 12-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 M892_16150 89c515917b469a84fb9026f9b85fdde9 197 Pfam PF14697 4Fe-4S dicluster domain 107 161 6.2E-18 T 12-10-2018 M892_16150 89c515917b469a84fb9026f9b85fdde9 197 Gene3D G3DSA:1.10.15.40 38 87 5.4E-8 T 12-10-2018 M892_16150 89c515917b469a84fb9026f9b85fdde9 197 Gene3D G3DSA:3.30.70.20 92 132 8.6E-6 T 12-10-2018 M892_16150 89c515917b469a84fb9026f9b85fdde9 197 PIRSF PIRSF005784 3 188 1.4E-86 T 12-10-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 M892_24875 99c0cae37a1faf6a30f729a277e77064 237 Pfam PF00072 Response regulator receiver domain 11 119 4.7E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_24875 99c0cae37a1faf6a30f729a277e77064 237 Gene3D G3DSA:1.10.10.10 123 237 4.4E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_24875 99c0cae37a1faf6a30f729a277e77064 237 SUPERFAMILY SSF52172 9 128 1.24E-37 T 12-10-2018 IPR011006 CheY-like superfamily M892_24875 99c0cae37a1faf6a30f729a277e77064 237 Gene3D G3DSA:3.40.50.2300 2 122 3.7E-34 T 12-10-2018 M892_24875 99c0cae37a1faf6a30f729a277e77064 237 SMART SM00448 8 118 8.1E-39 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_24875 99c0cae37a1faf6a30f729a277e77064 237 SMART SM00862 154 230 1.2E-18 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M892_24875 99c0cae37a1faf6a30f729a277e77064 237 SUPERFAMILY SSF46894 131 232 1.53E-24 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M892_24875 99c0cae37a1faf6a30f729a277e77064 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 230 4.0E-20 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M892_15780 796767333a495e497bd346f1e1e31c02 294 Gene3D G3DSA:2.70.98.10 2 294 1.0E-85 T 12-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 M892_15780 796767333a495e497bd346f1e1e31c02 294 SUPERFAMILY SSF74650 8 289 9.42E-75 T 12-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 M892_15780 796767333a495e497bd346f1e1e31c02 294 PIRSF PIRSF016020 3 294 1.8E-63 T 12-10-2018 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 M892_15780 796767333a495e497bd346f1e1e31c02 294 Pfam PF01263 Aldose 1-epimerase 27 291 1.5E-49 T 12-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 M892_22245 fc3af66b9d265ca9a531c036a1d091e2 117 Pfam PF05717 IS66 Orf2 like protein 9 103 1.1E-32 T 12-10-2018 IPR008878 Transposase IS66, Orf2 M892_05665 fc3af66b9d265ca9a531c036a1d091e2 117 Pfam PF05717 IS66 Orf2 like protein 9 103 1.1E-32 T 12-10-2018 IPR008878 Transposase IS66, Orf2 M892_00305 fc3af66b9d265ca9a531c036a1d091e2 117 Pfam PF05717 IS66 Orf2 like protein 9 103 1.1E-32 T 12-10-2018 IPR008878 Transposase IS66, Orf2 M892_02600 fc3af66b9d265ca9a531c036a1d091e2 117 Pfam PF05717 IS66 Orf2 like protein 9 103 1.1E-32 T 12-10-2018 IPR008878 Transposase IS66, Orf2 M892_18210 fc3af66b9d265ca9a531c036a1d091e2 117 Pfam PF05717 IS66 Orf2 like protein 9 103 1.1E-32 T 12-10-2018 IPR008878 Transposase IS66, Orf2 M892_25250 fc3af66b9d265ca9a531c036a1d091e2 117 Pfam PF05717 IS66 Orf2 like protein 9 103 1.1E-32 T 12-10-2018 IPR008878 Transposase IS66, Orf2 M892_14315 fc3af66b9d265ca9a531c036a1d091e2 117 Pfam PF05717 IS66 Orf2 like protein 9 103 1.1E-32 T 12-10-2018 IPR008878 Transposase IS66, Orf2 M892_19865 fc3af66b9d265ca9a531c036a1d091e2 117 Pfam PF05717 IS66 Orf2 like protein 9 103 1.1E-32 T 12-10-2018 IPR008878 Transposase IS66, Orf2 M892_03550 fc3af66b9d265ca9a531c036a1d091e2 117 Pfam PF05717 IS66 Orf2 like protein 9 103 1.1E-32 T 12-10-2018 IPR008878 Transposase IS66, Orf2 M892_28600 fc3af66b9d265ca9a531c036a1d091e2 117 Pfam PF05717 IS66 Orf2 like protein 9 103 1.1E-32 T 12-10-2018 IPR008878 Transposase IS66, Orf2 M892_07045 fc3af66b9d265ca9a531c036a1d091e2 117 Pfam PF05717 IS66 Orf2 like protein 9 103 1.1E-32 T 12-10-2018 IPR008878 Transposase IS66, Orf2 M892_01405 fc3af66b9d265ca9a531c036a1d091e2 117 Pfam PF05717 IS66 Orf2 like protein 9 103 1.1E-32 T 12-10-2018 IPR008878 Transposase IS66, Orf2 M892_28335 fc3af66b9d265ca9a531c036a1d091e2 117 Pfam PF05717 IS66 Orf2 like protein 9 103 1.1E-32 T 12-10-2018 IPR008878 Transposase IS66, Orf2 M892_17855 fc3af66b9d265ca9a531c036a1d091e2 117 Pfam PF05717 IS66 Orf2 like protein 9 103 1.1E-32 T 12-10-2018 IPR008878 Transposase IS66, Orf2 M892_22015 ba81a8888fbf7ead3c3325fab380688d 581 Gene3D G3DSA:3.40.50.2300 1 103 1.3E-24 T 12-10-2018 M892_22015 ba81a8888fbf7ead3c3325fab380688d 581 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 127 210 1.4E-36 T 12-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 M892_22015 ba81a8888fbf7ead3c3325fab380688d 581 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 93 7.4E-13 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 M892_22015 ba81a8888fbf7ead3c3325fab380688d 581 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 128 215 2.2E-17 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 M892_22015 ba81a8888fbf7ead3c3325fab380688d 581 Pfam PF02378 Phosphotransferase system, EIIC 251 514 1.2E-17 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 M892_22015 ba81a8888fbf7ead3c3325fab380688d 581 Gene3D G3DSA:3.40.50.2300 114 226 3.5E-41 T 12-10-2018 M892_22015 ba81a8888fbf7ead3c3325fab380688d 581 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 235 570 3.0E-142 T 12-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 M892_22015 ba81a8888fbf7ead3c3325fab380688d 581 SUPERFAMILY SSF52794 2 100 5.06E-28 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 M892_22015 ba81a8888fbf7ead3c3325fab380688d 581 SUPERFAMILY SSF52794 125 226 2.27E-37 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 M892_04175 fb55b50c4fda1849fc08696e44cadf93 451 Gene3D G3DSA:3.40.50.300 5 167 1.4E-48 T 12-10-2018 M892_04175 fb55b50c4fda1849fc08696e44cadf93 451 SUPERFAMILY SSF52540 13 239 1.0E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_04175 fb55b50c4fda1849fc08696e44cadf93 451 Gene3D G3DSA:1.10.8.60 168 243 3.7E-23 T 12-10-2018 M892_04175 fb55b50c4fda1849fc08696e44cadf93 451 Pfam PF16193 AAA C-terminal domain 193 270 5.1E-21 T 12-10-2018 IPR032423 AAA C-terminal domain M892_04175 fb55b50c4fda1849fc08696e44cadf93 451 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 56 161 8.0E-17 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 M892_04175 fb55b50c4fda1849fc08696e44cadf93 451 Pfam PF12002 MgsA AAA+ ATPase C terminal 271 437 2.7E-67 T 12-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal M892_04175 fb55b50c4fda1849fc08696e44cadf93 451 Gene3D G3DSA:1.20.272.10 244 348 1.3E-43 T 12-10-2018 M892_04175 fb55b50c4fda1849fc08696e44cadf93 451 Gene3D G3DSA:1.10.3710.10 349 450 1.2E-36 T 12-10-2018 M892_04175 fb55b50c4fda1849fc08696e44cadf93 451 SUPERFAMILY SSF48019 255 437 3.8E-73 T 12-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 M892_04175 fb55b50c4fda1849fc08696e44cadf93 451 SMART SM00382 52 168 1.6E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_10385 1dc4dfd801f089cb3d8784c5605dea94 1040 Pfam PF00873 AcrB/AcrD/AcrF family 4 1003 8.9E-277 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_10385 1dc4dfd801f089cb3d8784c5605dea94 1040 SUPERFAMILY SSF82693 41 130 1.65E-23 T 12-10-2018 M892_10385 1dc4dfd801f089cb3d8784c5605dea94 1040 Gene3D G3DSA:3.30.70.1320 134 325 2.2E-287 T 12-10-2018 M892_10385 1dc4dfd801f089cb3d8784c5605dea94 1040 SUPERFAMILY SSF82866 290 489 5.1E-47 T 12-10-2018 M892_10385 1dc4dfd801f089cb3d8784c5605dea94 1040 SUPERFAMILY SSF82866 782 1008 9.42E-48 T 12-10-2018 M892_10385 1dc4dfd801f089cb3d8784c5605dea94 1040 SUPERFAMILY SSF82714 182 263 1.57E-15 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M892_10385 1dc4dfd801f089cb3d8784c5605dea94 1040 SUPERFAMILY SSF82693 553 650 2.3E-21 T 12-10-2018 M892_10385 1dc4dfd801f089cb3d8784c5605dea94 1040 Gene3D G3DSA:1.20.1640.10 501 1001 2.2E-287 T 12-10-2018 M892_10385 1dc4dfd801f089cb3d8784c5605dea94 1040 Gene3D G3DSA:3.30.70.1440 648 843 2.2E-287 T 12-10-2018 M892_10385 1dc4dfd801f089cb3d8784c5605dea94 1040 Gene3D G3DSA:3.30.2090.10 178 268 2.2E-287 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M892_10385 1dc4dfd801f089cb3d8784c5605dea94 1040 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 2.1E-76 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_10385 1dc4dfd801f089cb3d8784c5605dea94 1040 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 2.1E-76 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_10385 1dc4dfd801f089cb3d8784c5605dea94 1040 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 2.1E-76 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_10385 1dc4dfd801f089cb3d8784c5605dea94 1040 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 2.1E-76 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_10385 1dc4dfd801f089cb3d8784c5605dea94 1040 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 2.1E-76 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_10385 1dc4dfd801f089cb3d8784c5605dea94 1040 PRINTS PR00702 Acriflavin resistance protein family signature 603 617 2.1E-76 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_10385 1dc4dfd801f089cb3d8784c5605dea94 1040 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 2.1E-76 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_10385 1dc4dfd801f089cb3d8784c5605dea94 1040 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 2.1E-76 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_10385 1dc4dfd801f089cb3d8784c5605dea94 1040 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 2.1E-76 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_10385 1dc4dfd801f089cb3d8784c5605dea94 1040 SUPERFAMILY SSF82693 136 323 9.94E-22 T 12-10-2018 M892_10385 1dc4dfd801f089cb3d8784c5605dea94 1040 Gene3D G3DSA:3.30.70.1430 555 647 2.2E-287 T 12-10-2018 M892_10385 1dc4dfd801f089cb3d8784c5605dea94 1040 SUPERFAMILY SSF82714 701 783 8.63E-18 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M892_10385 1dc4dfd801f089cb3d8784c5605dea94 1040 Gene3D G3DSA:3.30.2090.10 698 786 2.2E-287 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M892_10385 1dc4dfd801f089cb3d8784c5605dea94 1040 Gene3D G3DSA:1.20.1640.10 10 500 2.2E-287 T 12-10-2018 M892_10385 1dc4dfd801f089cb3d8784c5605dea94 1040 Gene3D G3DSA:3.30.70.1430 40 794 2.2E-287 T 12-10-2018 M892_00155 f9d1c38bb2aa3d168d85f952e3971393 256 Pfam PF02754 Cysteine-rich domain 6 85 1.7E-6 T 12-10-2018 IPR004017 Cysteine-rich domain M892_00155 f9d1c38bb2aa3d168d85f952e3971393 256 Pfam PF02754 Cysteine-rich domain 121 203 6.0E-8 T 12-10-2018 IPR004017 Cysteine-rich domain M892_11035 d671970d2e0c881a845a759f4de91cd3 419 Gene3D G3DSA:1.10.720.10 1 47 2.0E-22 T 12-10-2018 M892_11035 d671970d2e0c881a845a759f4de91cd3 419 SUPERFAMILY SSF52540 90 371 1.52E-68 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_11035 d671970d2e0c881a845a759f4de91cd3 419 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 5.0E-32 T 12-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 M892_11035 d671970d2e0c881a845a759f4de91cd3 419 Gene3D G3DSA:3.40.50.300 130 417 3.7E-134 T 12-10-2018 M892_11035 d671970d2e0c881a845a759f4de91cd3 419 SUPERFAMILY SSF50249 48 125 6.28E-29 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M892_11035 d671970d2e0c881a845a759f4de91cd3 419 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 252.036 T 12-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 M892_11035 d671970d2e0c881a845a759f4de91cd3 419 SMART SM00382 170 355 1.8E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_11035 d671970d2e0c881a845a759f4de91cd3 419 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 1.8E-219 T 12-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 M892_11035 d671970d2e0c881a845a759f4de91cd3 419 SUPERFAMILY SSF68912 1 46 6.28E-12 T 12-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily M892_11035 d671970d2e0c881a845a759f4de91cd3 419 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 2.7E-22 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M892_11035 d671970d2e0c881a845a759f4de91cd3 419 Gene3D G3DSA:2.40.50.140 48 117 1.1E-34 T 12-10-2018 M892_11035 d671970d2e0c881a845a759f4de91cd3 419 SMART SM00959 5 47 6.9E-17 T 12-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 M892_11035 d671970d2e0c881a845a759f4de91cd3 419 SMART SM00357 52 118 1.7E-17 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 M892_11035 d671970d2e0c881a845a759f4de91cd3 419 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 9.9E-17 T 12-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 M892_01140 3c06dfe245dd10b2b3d650a7af91773b 626 Pfam PF00571 CBS domain 225 277 1.2E-11 T 12-10-2018 IPR000644 CBS domain M892_01140 3c06dfe245dd10b2b3d650a7af91773b 626 Pfam PF00571 CBS domain 153 211 4.7E-9 T 12-10-2018 IPR000644 CBS domain M892_01140 3c06dfe245dd10b2b3d650a7af91773b 626 SUPERFAMILY SSF54631 146 278 6.95E-30 T 12-10-2018 M892_01140 3c06dfe245dd10b2b3d650a7af91773b 626 Gene3D G3DSA:3.10.580.10 144 281 9.6E-34 T 12-10-2018 M892_01140 3c06dfe245dd10b2b3d650a7af91773b 626 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 478 621 9.3E-45 T 12-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding M892_01140 3c06dfe245dd10b2b3d650a7af91773b 626 SMART SM00100 17 134 2.0E-12 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain M892_01140 3c06dfe245dd10b2b3d650a7af91773b 626 Gene3D G3DSA:2.60.120.10 2 135 5.4E-23 T 12-10-2018 IPR014710 RmlC-like jelly roll fold M892_01140 3c06dfe245dd10b2b3d650a7af91773b 626 SMART SM00116 232 279 3.8E-5 T 12-10-2018 IPR000644 CBS domain M892_01140 3c06dfe245dd10b2b3d650a7af91773b 626 SMART SM00116 159 215 0.0011 T 12-10-2018 IPR000644 CBS domain M892_01140 3c06dfe245dd10b2b3d650a7af91773b 626 Pfam PF03445 Putative nucleotidyltransferase DUF294 304 441 1.8E-47 T 12-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 M892_01140 3c06dfe245dd10b2b3d650a7af91773b 626 SUPERFAMILY SSF51206 7 133 2.62E-27 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like M892_01140 3c06dfe245dd10b2b3d650a7af91773b 626 Pfam PF00027 Cyclic nucleotide-binding domain 37 118 1.9E-12 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain M892_02990 625796986991548094907ade9d4fbe8c 326 SUPERFAMILY SSF46565 270 323 8.11E-13 T 12-10-2018 IPR036869 Chaperone J-domain superfamily M892_02990 625796986991548094907ade9d4fbe8c 326 SUPERFAMILY SSF81901 30 143 1.27E-11 T 12-10-2018 M892_02990 625796986991548094907ade9d4fbe8c 326 Gene3D G3DSA:1.10.287.110 262 326 3.5E-12 T 12-10-2018 IPR036869 Chaperone J-domain superfamily M892_02990 625796986991548094907ade9d4fbe8c 326 Gene3D G3DSA:1.25.40.10 20 194 2.5E-14 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_02990 625796986991548094907ade9d4fbe8c 326 SMART SM00671 64 99 0.44 T 12-10-2018 IPR006597 Sel1-like repeat M892_02990 625796986991548094907ade9d4fbe8c 326 SMART SM00671 29 63 38.0 T 12-10-2018 IPR006597 Sel1-like repeat M892_08525 89b2c2335d3fc7f9a9e162551c31003a 147 Pfam PF06853 Protein of unknown function (DUF1249) 27 139 1.4E-38 T 12-10-2018 IPR009659 Protein of unknown function DUF1249 M892_07485 2ac9ce5ce9f1de987748a3408c13e898 346 SUPERFAMILY SSF46689 15 131 1.19E-24 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_07485 2ac9ce5ce9f1de987748a3408c13e898 346 Pfam PF13358 DDE superfamily endonuclease 167 309 4.5E-35 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_07485 2ac9ce5ce9f1de987748a3408c13e898 346 Gene3D G3DSA:3.30.420.470 136 342 2.1E-13 T 12-10-2018 M892_07485 2ac9ce5ce9f1de987748a3408c13e898 346 Pfam PF13592 Winged helix-turn helix 98 154 2.3E-21 T 12-10-2018 IPR025959 Winged helix-turn helix domain M892_07485 2ac9ce5ce9f1de987748a3408c13e898 346 Pfam PF13551 Winged helix-turn helix 32 85 3.4E-7 T 12-10-2018 M892_07485 2ac9ce5ce9f1de987748a3408c13e898 346 SUPERFAMILY SSF53098 222 306 7.28E-7 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_04375 a76bf673ab321949548bf3b8ff0fa4a9 415 SUPERFAMILY SSF53187 11 410 1.37E-71 T 12-10-2018 M892_04375 a76bf673ab321949548bf3b8ff0fa4a9 415 Gene3D G3DSA:3.30.70.360 218 331 1.2E-125 T 12-10-2018 M892_04375 a76bf673ab321949548bf3b8ff0fa4a9 415 Gene3D G3DSA:3.40.630.10 28 406 1.2E-125 T 12-10-2018 M892_04375 a76bf673ab321949548bf3b8ff0fa4a9 415 SUPERFAMILY SSF55031 218 331 3.59E-22 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain M892_04375 a76bf673ab321949548bf3b8ff0fa4a9 415 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 17 408 1.2E-116 T 12-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 M892_04375 a76bf673ab321949548bf3b8ff0fa4a9 415 Pfam PF01546 Peptidase family M20/M25/M40 82 409 9.8E-23 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 M892_04375 a76bf673ab321949548bf3b8ff0fa4a9 415 PIRSF PIRSF001235 9 415 1.1E-117 T 12-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 M892_04130 684dd9ed02a28b567f0cedebef195360 383 Gene3D G3DSA:3.90.1150.10 42 372 1.4E-122 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M892_04130 684dd9ed02a28b567f0cedebef195360 383 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 22 376 2.9E-137 T 12-10-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 M892_04130 684dd9ed02a28b567f0cedebef195360 383 Pfam PF00155 Aminotransferase class I and II 42 372 3.4E-50 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 M892_04130 684dd9ed02a28b567f0cedebef195360 383 Gene3D G3DSA:3.40.640.10 58 283 1.4E-122 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M892_04130 684dd9ed02a28b567f0cedebef195360 383 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 4 380 47.041 T 12-10-2018 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 M892_04130 684dd9ed02a28b567f0cedebef195360 383 SUPERFAMILY SSF53383 4 379 2.39E-99 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M892_04130 684dd9ed02a28b567f0cedebef195360 383 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 232 241 - T 12-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 M892_05180 a66600caa07bc0f95328d1e4b4807dfc 1489 PIRSF PIRSF005246 3 1489 0.0 T 12-10-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 M892_05180 a66600caa07bc0f95328d1e4b4807dfc 1489 SUPERFAMILY SSF52540 23 1436 2.39E-5 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_05180 a66600caa07bc0f95328d1e4b4807dfc 1489 Gene3D G3DSA:1.20.58.850 623 833 6.6E-136 T 12-10-2018 M892_05180 a66600caa07bc0f95328d1e4b4807dfc 1489 Hamap MF_01800 Chromosome partition protein MukB [mukB]. 3 1474 10.924 T 12-10-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 M892_05180 a66600caa07bc0f95328d1e4b4807dfc 1489 Pfam PF04310 MukB N-terminal 4 229 6.9E-121 T 12-10-2018 IPR007406 MukB, N-terminal domain GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 M892_05180 a66600caa07bc0f95328d1e4b4807dfc 1489 SUPERFAMILY SSF52540 28 226 5.7E-22 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_05180 a66600caa07bc0f95328d1e4b4807dfc 1489 Pfam PF16330 MukB hinge domain 649 813 1.4E-72 T 12-10-2018 IPR032520 MukB, hinge domain M892_05180 a66600caa07bc0f95328d1e4b4807dfc 1489 Gene3D G3DSA:3.40.1140.10 3 229 1.7E-97 T 12-10-2018 M892_05180 a66600caa07bc0f95328d1e4b4807dfc 1489 Gene3D G3DSA:1.20.58.850 585 855 6.6E-136 T 12-10-2018 M892_05180 a66600caa07bc0f95328d1e4b4807dfc 1489 Gene3D G3DSA:1.20.1060.30 670 781 6.6E-136 T 12-10-2018 M892_05180 a66600caa07bc0f95328d1e4b4807dfc 1489 Gene3D G3DSA:3.40.1140.10 1385 1471 8.0E-39 T 12-10-2018 M892_05180 a66600caa07bc0f95328d1e4b4807dfc 1489 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1339 1427 1.0E-14 T 12-10-2018 M892_12245 ca034538b952e4b5281c0ce6364aaf1b 70 Pfam PF06794 Uncharacterised protein family (UPF0270) 1 68 6.3E-34 T 12-10-2018 IPR010648 Uncharacterised protein family UPF0270 M892_12245 ca034538b952e4b5281c0ce6364aaf1b 70 Hamap MF_00690 UPF0270 protein YheU [yheU]. 1 70 25.525 T 12-10-2018 IPR010648 Uncharacterised protein family UPF0270 M892_12245 ca034538b952e4b5281c0ce6364aaf1b 70 Gene3D G3DSA:1.10.10.610 1 70 1.8E-29 T 12-10-2018 IPR036685 YehU-like superfamily M892_12245 ca034538b952e4b5281c0ce6364aaf1b 70 PIRSF PIRSF006169 1 70 1.7E-35 T 12-10-2018 IPR010648 Uncharacterised protein family UPF0270 M892_12245 ca034538b952e4b5281c0ce6364aaf1b 70 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 64 1.0E-23 T 12-10-2018 IPR010648 Uncharacterised protein family UPF0270 M892_12245 ca034538b952e4b5281c0ce6364aaf1b 70 SUPERFAMILY SSF118001 1 69 4.97E-28 T 12-10-2018 IPR036685 YehU-like superfamily M892_11525 85bc52b98e9b9f4fce1ea6cc458be630 122 Gene3D G3DSA:1.20.5.710 2 51 1.4E-22 T 12-10-2018 M892_11525 85bc52b98e9b9f4fce1ea6cc458be630 122 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 56 122 9.1E-30 T 12-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_11525 85bc52b98e9b9f4fce1ea6cc458be630 122 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 122 24.304 T 12-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_11525 85bc52b98e9b9f4fce1ea6cc458be630 122 SUPERFAMILY SSF54736 52 122 2.62E-24 T 12-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like M892_11525 85bc52b98e9b9f4fce1ea6cc458be630 122 SUPERFAMILY SSF48300 4 58 4.19E-15 T 12-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_11525 85bc52b98e9b9f4fce1ea6cc458be630 122 Gene3D G3DSA:3.30.1390.10 52 122 2.3E-30 T 12-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like M892_11525 85bc52b98e9b9f4fce1ea6cc458be630 122 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 50 6.4E-16 T 12-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_11525 85bc52b98e9b9f4fce1ea6cc458be630 122 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 122 1.6E-46 T 12-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_11525 85bc52b98e9b9f4fce1ea6cc458be630 122 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 57 122 1.0E-28 T 12-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_23900 50f9a28bde60aa768c1dc35729c97d92 322 Pfam PF03783 Curli production assembly/transport component CsgG 49 229 4.4E-39 T 12-10-2018 IPR005534 Curli production assembly/transport component CsgG GO:0030288 M892_23900 50f9a28bde60aa768c1dc35729c97d92 322 Gene3D G3DSA:3.40.50.10610 76 236 1.2E-5 T 12-10-2018 M892_27165 2d04966f586fba633693e9b28622cef7 836 Pfam PF02687 FtsX-like permease family 735 824 3.0E-10 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 M892_02685 8b81860d1ada2580b4374b50b8a7bb78 169 SUPERFAMILY SSF50475 2 163 1.96E-31 T 12-10-2018 M892_02685 8b81860d1ada2580b4374b50b8a7bb78 169 Gene3D G3DSA:2.30.110.10 1 169 1.8E-49 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 M892_02685 8b81860d1ada2580b4374b50b8a7bb78 169 SMART SM00903 19 167 2.6E-6 T 12-10-2018 IPR002563 Flavin reductase like domain GO:0010181 M892_02685 8b81860d1ada2580b4374b50b8a7bb78 169 Pfam PF01613 Flavin reductase like domain 22 163 5.5E-16 T 12-10-2018 IPR002563 Flavin reductase like domain GO:0010181 M892_00915 eb22860b24ebff14f3f488b0b0d6ef43 203 Gene3D G3DSA:1.10.3480.10 2 199 6.6E-45 T 12-10-2018 M892_00915 eb22860b24ebff14f3f488b0b0d6ef43 203 Pfam PF02613 Nitrate reductase delta subunit 40 157 2.5E-26 T 12-10-2018 IPR020945 DMSO/Nitrate reductase chaperone M892_00915 eb22860b24ebff14f3f488b0b0d6ef43 203 SUPERFAMILY SSF89155 5 198 1.44E-48 T 12-10-2018 IPR036411 TorD-like superfamily M892_00915 eb22860b24ebff14f3f488b0b0d6ef43 203 PIRSF PIRSF004690 3 198 1.4E-36 T 12-10-2018 IPR026269 Tat proofreading chaperone DmsD-type M892_28510 24af6d831e265228b1743b3fb4264780 200 Pfam PF01464 Transglycosylase SLT domain 14 115 5.7E-11 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 M892_28510 24af6d831e265228b1743b3fb4264780 200 SUPERFAMILY SSF53955 17 134 1.56E-10 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily M892_28510 24af6d831e265228b1743b3fb4264780 200 Gene3D G3DSA:1.10.530.10 13 178 1.7E-9 T 12-10-2018 M892_14990 6a537e2c52ec2448a2eb34a0094eec6f 282 Hamap MF_01119 UPF0294 protein YafD [yafD]. 1 278 55.515 T 12-10-2018 IPR022958 Uncharacterised protein family UPF0294 M892_14990 6a537e2c52ec2448a2eb34a0094eec6f 282 Gene3D G3DSA:3.60.10.10 60 282 6.9E-20 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily M892_14990 6a537e2c52ec2448a2eb34a0094eec6f 282 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 66 270 3.7E-6 T 12-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase M892_14990 6a537e2c52ec2448a2eb34a0094eec6f 282 SUPERFAMILY SSF56219 61 277 1.96E-23 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily M892_06440 52bdbcb514c79b92370fe241ef88a337 153 SUPERFAMILY SSF141322 113 151 1.29E-5 T 12-10-2018 M892_06440 52bdbcb514c79b92370fe241ef88a337 153 Pfam PF01957 NfeD-like C-terminal, partner-binding 14 151 9.3E-26 T 12-10-2018 IPR002810 NfeD-like, C-terminal domain M892_06440 52bdbcb514c79b92370fe241ef88a337 153 Gene3D G3DSA:2.40.50.140 82 153 7.8E-10 T 12-10-2018 M892_09970 2f80bee3e40c8668c80f7f6479bff123 353 PIRSF PIRSF001415 2 336 6.5E-153 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 M892_09970 2f80bee3e40c8668c80f7f6479bff123 353 SMART SM01004 9 333 8.4E-246 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 M892_09970 2f80bee3e40c8668c80f7f6479bff123 353 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 252 264 - T 12-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 M892_09970 2f80bee3e40c8668c80f7f6479bff123 353 SUPERFAMILY SSF51569 7 335 3.22E-145 T 12-10-2018 M892_09970 2f80bee3e40c8668c80f7f6479bff123 353 Pfam PF00490 Delta-aminolevulinic acid dehydratase 12 332 1.7E-141 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 M892_09970 2f80bee3e40c8668c80f7f6479bff123 353 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 198 217 1.7E-57 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 M892_09970 2f80bee3e40c8668c80f7f6479bff123 353 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 277 292 1.7E-57 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 M892_09970 2f80bee3e40c8668c80f7f6479bff123 353 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 307 326 1.7E-57 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 M892_09970 2f80bee3e40c8668c80f7f6479bff123 353 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 129 143 1.7E-57 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 M892_09970 2f80bee3e40c8668c80f7f6479bff123 353 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 252 268 1.7E-57 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 M892_09970 2f80bee3e40c8668c80f7f6479bff123 353 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 160 179 1.7E-57 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 M892_09970 2f80bee3e40c8668c80f7f6479bff123 353 Gene3D G3DSA:3.20.20.70 2 337 3.9E-148 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M892_22485 27b844fccabd1762f697f043dcaa797e 718 SUPERFAMILY SSF56935 41 715 2.88E-83 T 12-10-2018 M892_22485 27b844fccabd1762f697f043dcaa797e 718 Gene3D G3DSA:2.40.170.20 174 715 9.7E-40 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily M892_22485 27b844fccabd1762f697f043dcaa797e 718 Pfam PF00593 TonB dependent receptor 296 713 1.9E-21 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel M892_22485 27b844fccabd1762f697f043dcaa797e 718 Gene3D G3DSA:2.170.130.10 35 165 2.4E-29 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily M892_22485 27b844fccabd1762f697f043dcaa797e 718 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 160 2.1E-20 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain M892_05910 a1ab237f6c02e5bec228ed4305167344 404 Pfam PF00155 Aminotransferase class I and II 61 391 2.7E-48 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 M892_05910 a1ab237f6c02e5bec228ed4305167344 404 Gene3D G3DSA:3.40.640.10 53 294 1.3E-145 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M892_05910 a1ab237f6c02e5bec228ed4305167344 404 SUPERFAMILY SSF53383 5 399 2.31E-95 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M892_05910 a1ab237f6c02e5bec228ed4305167344 404 Gene3D G3DSA:3.90.1150.10 21 398 1.3E-145 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M892_14950 0719081ba3358d6f4467b10389d4f0f7 262 Gene3D G3DSA:1.20.1180.10 197 262 9.4E-22 T 12-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 M892_14950 0719081ba3358d6f4467b10389d4f0f7 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 36 69 3.5E-5 T 12-10-2018 IPR001451 Hexapeptide repeat M892_14950 0719081ba3358d6f4467b10389d4f0f7 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 2 33 2.4E-6 T 12-10-2018 IPR001451 Hexapeptide repeat M892_14950 0719081ba3358d6f4467b10389d4f0f7 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 3.4E-7 T 12-10-2018 IPR001451 Hexapeptide repeat M892_14950 0719081ba3358d6f4467b10389d4f0f7 262 SUPERFAMILY SSF51161 1 262 1.28E-73 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily M892_14950 0719081ba3358d6f4467b10389d4f0f7 262 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 180 261 6.6E-25 T 12-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 M892_14950 0719081ba3358d6f4467b10389d4f0f7 262 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 8 260 3.3E-95 T 12-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 M892_14950 0719081ba3358d6f4467b10389d4f0f7 262 PIRSF PIRSF000456 4 262 9.8E-96 T 12-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 M892_14950 0719081ba3358d6f4467b10389d4f0f7 262 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 5 262 42.755 T 12-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 M892_14950 0719081ba3358d6f4467b10389d4f0f7 262 Gene3D G3DSA:2.160.10.10 1 196 3.0E-50 T 12-10-2018 M892_17190 36eec7f2550e8d63fa130d985766d851 410 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 410 103.303 T 12-10-2018 IPR008135 Competence-induced protein CinA M892_17190 36eec7f2550e8d63fa130d985766d851 410 SUPERFAMILY SSF142433 252 386 1.7E-8 T 12-10-2018 IPR036653 CinA-like, C-terminal M892_17190 36eec7f2550e8d63fa130d985766d851 410 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 2 403 5.5E-75 T 12-10-2018 IPR008135 Competence-induced protein CinA M892_17190 36eec7f2550e8d63fa130d985766d851 410 Gene3D G3DSA:3.40.980.10 1 171 2.1E-43 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily M892_17190 36eec7f2550e8d63fa130d985766d851 410 PIRSF PIRSF006728 1 391 2.3E-112 T 12-10-2018 IPR008135 Competence-induced protein CinA M892_17190 36eec7f2550e8d63fa130d985766d851 410 SMART SM00852 4 171 7.6E-30 T 12-10-2018 IPR001453 MoaB/Mog domain M892_17190 36eec7f2550e8d63fa130d985766d851 410 SUPERFAMILY SSF53218 2 203 2.36E-33 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily M892_17190 36eec7f2550e8d63fa130d985766d851 410 Pfam PF00994 Probable molybdopterin binding domain 4 170 2.9E-28 T 12-10-2018 IPR001453 MoaB/Mog domain M892_17240 8a3eb3782c946ec9b7bf77f66eacc887 200 SUPERFAMILY SSF48695 7 188 7.12E-27 T 12-10-2018 IPR036280 Multiheme cytochrome superfamily M892_17240 8a3eb3782c946ec9b7bf77f66eacc887 200 Gene3D G3DSA:3.90.10.10 39 141 5.0E-6 T 12-10-2018 M892_17240 8a3eb3782c946ec9b7bf77f66eacc887 200 Gene3D G3DSA:3.90.10.10 142 197 1.3E-5 T 12-10-2018 M892_17240 8a3eb3782c946ec9b7bf77f66eacc887 200 TIGRFAM TIGR03146 cyt_nit_nrfB: cytochrome c nitrite reductase, pentaheme subunit 42 188 1.1E-60 T 12-10-2018 IPR017564 Cytochrome c nitrite reductase, pentahaem subunit GO:0006807|GO:0020037|GO:0042597 M892_17240 8a3eb3782c946ec9b7bf77f66eacc887 200 Pfam PF13435 Cytochrome c554 and c-prime 84 161 4.0E-5 T 12-10-2018 IPR023155 Cytochrome c-552/4 M892_18820 15276f7162e59744360473ecf498abc7 640 PRINTS PR01180 Arginine decarboxylase signature 94 108 1.4E-62 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 M892_18820 15276f7162e59744360473ecf498abc7 640 PRINTS PR01180 Arginine decarboxylase signature 153 168 1.4E-62 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 M892_18820 15276f7162e59744360473ecf498abc7 640 PRINTS PR01180 Arginine decarboxylase signature 203 225 1.4E-62 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 M892_18820 15276f7162e59744360473ecf498abc7 640 PRINTS PR01180 Arginine decarboxylase signature 549 570 1.4E-62 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 M892_18820 15276f7162e59744360473ecf498abc7 640 PRINTS PR01180 Arginine decarboxylase signature 330 347 1.4E-62 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 M892_18820 15276f7162e59744360473ecf498abc7 640 PRINTS PR01180 Arginine decarboxylase signature 179 200 1.4E-62 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 M892_18820 15276f7162e59744360473ecf498abc7 640 PRINTS PR01180 Arginine decarboxylase signature 471 492 1.4E-62 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 M892_18820 15276f7162e59744360473ecf498abc7 640 PRINTS PR01180 Arginine decarboxylase signature 70 85 1.4E-62 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 M892_18820 15276f7162e59744360473ecf498abc7 640 PRINTS PR01180 Arginine decarboxylase signature 496 521 1.4E-62 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 M892_18820 15276f7162e59744360473ecf498abc7 640 SUPERFAMILY SSF51419 70 352 7.03E-64 T 12-10-2018 IPR029066 PLP-binding barrel M892_18820 15276f7162e59744360473ecf498abc7 640 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 7 639 42.421 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 M892_18820 15276f7162e59744360473ecf498abc7 640 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 549 562 8.8E-13 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 M892_18820 15276f7162e59744360473ecf498abc7 640 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 246 259 8.8E-13 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 M892_18820 15276f7162e59744360473ecf498abc7 640 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 340 359 8.8E-13 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 M892_18820 15276f7162e59744360473ecf498abc7 640 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 102 120 8.8E-13 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 M892_18820 15276f7162e59744360473ecf498abc7 640 TIGRFAM TIGR01273 speA: arginine decarboxylase 12 638 1.1E-265 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 M892_18820 15276f7162e59744360473ecf498abc7 640 Gene3D G3DSA:3.20.20.10 71 355 1.1E-234 T 12-10-2018 IPR029066 PLP-binding barrel M892_18820 15276f7162e59744360473ecf498abc7 640 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 82 350 9.9E-49 T 12-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 M892_18820 15276f7162e59744360473ecf498abc7 640 Gene3D G3DSA:2.40.37.10 18 576 1.1E-234 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 M892_18820 15276f7162e59744360473ecf498abc7 640 PIRSF PIRSF001336 2 640 6.2E-251 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 M892_18820 15276f7162e59744360473ecf498abc7 640 Gene3D G3DSA:1.20.58.930 372 467 1.1E-234 T 12-10-2018 M892_11870 fba4bfa776912321bac447b15e6e2778 250 SUPERFAMILY SSF53098 8 236 9.1E-23 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_11870 fba4bfa776912321bac447b15e6e2778 250 Pfam PF01609 Transposase DDE domain 130 188 4.7E-6 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_14415 eab593190423d53e803f75f2b01a2265 607 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 264 278 - T 12-10-2018 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 M892_14415 eab593190423d53e803f75f2b01a2265 607 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 2 32 2.1E-7 T 12-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 M892_14415 eab593190423d53e803f75f2b01a2265 607 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 149 433 2.6E-114 T 12-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 M892_14415 eab593190423d53e803f75f2b01a2265 607 SUPERFAMILY SSF49303 37 147 7.81E-26 T 12-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily M892_14415 eab593190423d53e803f75f2b01a2265 607 Gene3D G3DSA:2.70.98.10 540 606 7.7E-10 T 12-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 M892_14415 eab593190423d53e803f75f2b01a2265 607 SUPERFAMILY SSF49303 436 532 8.87E-22 T 12-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily M892_14415 eab593190423d53e803f75f2b01a2265 607 Gene3D G3DSA:3.20.20.80 148 428 1.1E-101 T 12-10-2018 M892_14415 eab593190423d53e803f75f2b01a2265 607 Gene3D G3DSA:2.60.40.10 429 530 1.5E-16 T 12-10-2018 IPR013783 Immunoglobulin-like fold M892_14415 eab593190423d53e803f75f2b01a2265 607 SUPERFAMILY SSF51445 149 427 1.82E-85 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily M892_14415 eab593190423d53e803f75f2b01a2265 607 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 199 224 - T 12-10-2018 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 M892_14415 eab593190423d53e803f75f2b01a2265 607 PRINTS PR00132 Glycosyl hydrolase family 2 signature 335 350 1.8E-27 T 12-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 M892_14415 eab593190423d53e803f75f2b01a2265 607 PRINTS PR00132 Glycosyl hydrolase family 2 signature 158 172 1.8E-27 T 12-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 M892_14415 eab593190423d53e803f75f2b01a2265 607 PRINTS PR00132 Glycosyl hydrolase family 2 signature 264 279 1.8E-27 T 12-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 M892_14415 eab593190423d53e803f75f2b01a2265 607 PRINTS PR00132 Glycosyl hydrolase family 2 signature 189 207 1.8E-27 T 12-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 M892_14415 eab593190423d53e803f75f2b01a2265 607 Pfam PF00703 Glycosyl hydrolases family 2 37 147 8.4E-20 T 12-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 M892_14415 eab593190423d53e803f75f2b01a2265 607 Gene3D G3DSA:2.60.120.260 1 35 1.5E-11 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily M892_14415 eab593190423d53e803f75f2b01a2265 607 Gene3D G3DSA:2.60.40.10 36 147 2.7E-27 T 12-10-2018 IPR013783 Immunoglobulin-like fold M892_14415 eab593190423d53e803f75f2b01a2265 607 SUPERFAMILY SSF74650 542 604 3.92E-12 T 12-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 M892_14415 eab593190423d53e803f75f2b01a2265 607 SUPERFAMILY SSF49785 1 34 1.18E-8 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily M892_14415 eab593190423d53e803f75f2b01a2265 607 Pfam PF16353 Domain of unknown function(DUF4981) 443 528 1.3E-14 T 12-10-2018 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 M892_14415 eab593190423d53e803f75f2b01a2265 607 Pfam PF02929 Beta galactosidase small chain 559 601 7.7E-8 T 12-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 M892_08180 1c5c5caa4255b1d9921825a200a734bc 226 Pfam PF03167 Uracil DNA glycosylase superfamily 54 209 2.6E-26 T 12-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 M892_08180 1c5c5caa4255b1d9921825a200a734bc 226 SMART SM00986 49 210 1.6E-39 T 12-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 M892_08180 1c5c5caa4255b1d9921825a200a734bc 226 SMART SM00987 49 210 1.6E-39 T 12-10-2018 M892_08180 1c5c5caa4255b1d9921825a200a734bc 226 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 4 221 40.067 T 12-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 M892_08180 1c5c5caa4255b1d9921825a200a734bc 226 Gene3D G3DSA:3.40.470.10 2 225 1.6E-104 T 12-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 M892_08180 1c5c5caa4255b1d9921825a200a734bc 226 SUPERFAMILY SSF52141 5 222 2.16E-96 T 12-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 M892_08180 1c5c5caa4255b1d9921825a200a734bc 226 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 57 66 - T 12-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 M892_08180 1c5c5caa4255b1d9921825a200a734bc 226 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 6 214 1.5E-86 T 12-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 M892_27815 5502f4ab142ba87a691d12b10cb0c500 340 SMART SM00387 242 340 5.8E-7 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_27815 5502f4ab142ba87a691d12b10cb0c500 340 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 247 338 5.0E-7 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_27815 5502f4ab142ba87a691d12b10cb0c500 340 Gene3D G3DSA:3.30.565.10 210 340 2.0E-18 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_27815 5502f4ab142ba87a691d12b10cb0c500 340 SUPERFAMILY SSF55874 212 337 3.54E-16 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_27815 5502f4ab142ba87a691d12b10cb0c500 340 Pfam PF06580 Histidine kinase 149 227 4.2E-23 T 12-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 M892_16130 78227594e555c22386c656fc59fedbb9 230 PIRSF PIRSF006102 1 220 3.8E-77 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 M892_16130 78227594e555c22386c656fc59fedbb9 230 Hamap MF_00478 Ion-translocating oxidoreductase complex subunit E [rsxE]. 1 210 27.938 T 12-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 M892_16130 78227594e555c22386c656fc59fedbb9 230 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 7 208 2.5E-86 T 12-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 M892_16130 78227594e555c22386c656fc59fedbb9 230 Pfam PF02508 Rnf-Nqr subunit, membrane protein 7 200 2.9E-65 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 M892_24060 9398f602fbee4f2acb7bfa7ed333c5ce 497 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 275 286 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 M892_24060 9398f602fbee4f2acb7bfa7ed333c5ce 497 Gene3D G3DSA:3.40.605.10 24 458 2.8E-141 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 M892_24060 9398f602fbee4f2acb7bfa7ed333c5ce 497 SUPERFAMILY SSF53720 2 484 3.4E-143 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 M892_24060 9398f602fbee4f2acb7bfa7ed333c5ce 497 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 6 481 7.8E-241 T 12-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 M892_24060 9398f602fbee4f2acb7bfa7ed333c5ce 497 Pfam PF00171 Aldehyde dehydrogenase family 14 477 2.4E-137 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 M892_24060 9398f602fbee4f2acb7bfa7ed333c5ce 497 Gene3D G3DSA:3.40.309.10 250 450 2.8E-141 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 M892_05065 3adbc0ea6ea027a34fa0cb07629aef69 251 Gene3D G3DSA:1.25.40.10 133 251 2.6E-23 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_05065 3adbc0ea6ea027a34fa0cb07629aef69 251 SUPERFAMILY SSF48452 142 244 2.85E-12 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_05065 3adbc0ea6ea027a34fa0cb07629aef69 251 Gene3D G3DSA:1.20.5.110 40 119 1.3E-21 T 12-10-2018 M892_05065 3adbc0ea6ea027a34fa0cb07629aef69 251 Pfam PF16331 TolA binding protein trimerisation 43 114 4.6E-24 T 12-10-2018 IPR032519 YbgF, trimerisation domain GO:0070206 M892_05065 3adbc0ea6ea027a34fa0cb07629aef69 251 Pfam PF13432 Tetratricopeptide repeat 145 196 3.3E-7 T 12-10-2018 M892_05065 3adbc0ea6ea027a34fa0cb07629aef69 251 SMART SM00028 207 240 7.3 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_05065 3adbc0ea6ea027a34fa0cb07629aef69 251 SMART SM00028 171 204 22.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_05065 3adbc0ea6ea027a34fa0cb07629aef69 251 Pfam PF13174 Tetratricopeptide repeat 208 240 2.1E-4 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_05065 3adbc0ea6ea027a34fa0cb07629aef69 251 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 5 251 17.241 T 12-10-2018 IPR034706 Cell division coordinator CpoB GO:0051301 M892_05065 3adbc0ea6ea027a34fa0cb07629aef69 251 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 134 249 9.6E-38 T 12-10-2018 IPR014162 Cell division coordinator CpoB, C-terminal M892_24675 62a6a9b49ac6e6a610ca8cd99aa214aa 151 Gene3D G3DSA:3.30.70.920 58 148 8.0E-13 T 12-10-2018 M892_24675 62a6a9b49ac6e6a610ca8cd99aa214aa 151 SMART SM00344 1 110 3.0E-15 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 M892_24675 62a6a9b49ac6e6a610ca8cd99aa214aa 151 Pfam PF13404 AsnC-type helix-turn-helix domain 1 42 4.8E-15 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 M892_24675 62a6a9b49ac6e6a610ca8cd99aa214aa 151 Pfam PF01037 Lrp/AsnC ligand binding domain 76 139 4.3E-13 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain M892_24675 62a6a9b49ac6e6a610ca8cd99aa214aa 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 3.9E-11 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 M892_24675 62a6a9b49ac6e6a610ca8cd99aa214aa 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 3.9E-11 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 M892_24675 62a6a9b49ac6e6a610ca8cd99aa214aa 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 3.9E-11 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 M892_24675 62a6a9b49ac6e6a610ca8cd99aa214aa 151 SUPERFAMILY SSF54909 63 145 3.49E-14 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel M892_24675 62a6a9b49ac6e6a610ca8cd99aa214aa 151 SUPERFAMILY SSF46785 1 55 2.85E-13 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_24675 62a6a9b49ac6e6a610ca8cd99aa214aa 151 Gene3D G3DSA:1.10.10.10 1 52 5.9E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_22750 8c14d6df06990fdad4fcce791efb4c23 877 Gene3D G3DSA:3.40.630.30 713 877 2.3E-39 T 12-10-2018 M892_22750 8c14d6df06990fdad4fcce791efb4c23 877 Pfam PF13380 CoA binding domain 12 124 7.9E-16 T 12-10-2018 IPR003781 CoA-binding GO:0048037 M892_22750 8c14d6df06990fdad4fcce791efb4c23 877 Gene3D G3DSA:3.30.1490.20 495 572 3.1E-54 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 M892_22750 8c14d6df06990fdad4fcce791efb4c23 877 SUPERFAMILY SSF56059 477 684 2.95E-26 T 12-10-2018 M892_22750 8c14d6df06990fdad4fcce791efb4c23 877 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 140 274 6.9E-43 T 12-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain M892_22750 8c14d6df06990fdad4fcce791efb4c23 877 SUPERFAMILY SSF55729 718 862 3.31E-20 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_22750 8c14d6df06990fdad4fcce791efb4c23 877 Gene3D G3DSA:3.40.50.720 1 118 8.3E-27 T 12-10-2018 M892_22750 8c14d6df06990fdad4fcce791efb4c23 877 Pfam PF00583 Acetyltransferase (GNAT) family 756 859 4.8E-8 T 12-10-2018 IPR000182 GNAT domain M892_22750 8c14d6df06990fdad4fcce791efb4c23 877 Gene3D G3DSA:3.40.50.261 279 449 4.4E-48 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 M892_22750 8c14d6df06990fdad4fcce791efb4c23 877 Gene3D G3DSA:3.40.50.261 119 277 7.5E-43 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 M892_22750 8c14d6df06990fdad4fcce791efb4c23 877 SUPERFAMILY SSF52210 118 276 6.02E-31 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 M892_22750 8c14d6df06990fdad4fcce791efb4c23 877 SUPERFAMILY SSF51735 2 128 5.37E-26 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_22750 8c14d6df06990fdad4fcce791efb4c23 877 SMART SM00881 7 102 4.6E-17 T 12-10-2018 IPR003781 CoA-binding GO:0048037 M892_22750 8c14d6df06990fdad4fcce791efb4c23 877 Pfam PF13549 ATP-grasp domain 470 690 1.2E-66 T 12-10-2018 M892_22750 8c14d6df06990fdad4fcce791efb4c23 877 SUPERFAMILY SSF52210 281 441 2.09E-37 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 M892_22750 8c14d6df06990fdad4fcce791efb4c23 877 Gene3D G3DSA:3.30.470.20 476 687 3.1E-54 T 12-10-2018 M892_07070 e49286a32c44b91f17964b74b61c0976 80 Gene3D G3DSA:1.10.287.1040 4 80 2.0E-22 T 12-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 M892_07070 e49286a32c44b91f17964b74b61c0976 80 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 10 70 15.199 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 M892_07070 e49286a32c44b91f17964b74b61c0976 80 Pfam PF02609 Exonuclease VII small subunit 11 61 4.4E-18 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 M892_07070 e49286a32c44b91f17964b74b61c0976 80 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 50 6.0E-22 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 M892_07070 e49286a32c44b91f17964b74b61c0976 80 PIRSF PIRSF006488 1 80 2.2E-21 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 M892_07070 e49286a32c44b91f17964b74b61c0976 80 SUPERFAMILY SSF116842 2 72 8.89E-21 T 12-10-2018 M892_07070 e49286a32c44b91f17964b74b61c0976 80 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 10 65 1.2E-20 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 M892_00650 ebb8068459c4b7ac5066e57439ce64e4 331 Gene3D G3DSA:3.10.450.50 5 145 1.4E-18 T 12-10-2018 M892_00650 ebb8068459c4b7ac5066e57439ce64e4 331 Pfam PF07366 SnoaL-like polyketide cyclase 198 313 9.1E-14 T 12-10-2018 IPR009959 Polyketide cyclase SnoaL-like GO:0030638 MetaCyc: PWY-7352|MetaCyc: PWY-7354 M892_00650 ebb8068459c4b7ac5066e57439ce64e4 331 Pfam PF07366 SnoaL-like polyketide cyclase 10 137 1.5E-8 T 12-10-2018 IPR009959 Polyketide cyclase SnoaL-like GO:0030638 MetaCyc: PWY-7352|MetaCyc: PWY-7354 M892_00650 ebb8068459c4b7ac5066e57439ce64e4 331 SUPERFAMILY SSF54427 7 147 1.3E-19 T 12-10-2018 IPR032710 NTF2-like domain superfamily M892_00650 ebb8068459c4b7ac5066e57439ce64e4 331 SUPERFAMILY SSF54427 174 321 1.66E-27 T 12-10-2018 IPR032710 NTF2-like domain superfamily M892_00650 ebb8068459c4b7ac5066e57439ce64e4 331 Gene3D G3DSA:3.10.450.50 175 323 3.7E-30 T 12-10-2018 M892_02785 bda8ace694fbc3c59d0c887fffe32e1b 958 Gene3D G3DSA:3.30.559.10 1 168 1.4E-34 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 M892_02785 bda8ace694fbc3c59d0c887fffe32e1b 958 Gene3D G3DSA:3.30.559.10 442 607 5.4E-26 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 M892_02785 bda8ace694fbc3c59d0c887fffe32e1b 958 SUPERFAMILY SSF52777 4 175 4.74E-18 T 12-10-2018 M892_02785 bda8ace694fbc3c59d0c887fffe32e1b 958 SUPERFAMILY SSF52777 185 426 1.89E-38 T 12-10-2018 M892_02785 bda8ace694fbc3c59d0c887fffe32e1b 958 SUPERFAMILY SSF52777 618 830 1.63E-21 T 12-10-2018 M892_02785 bda8ace694fbc3c59d0c887fffe32e1b 958 SUPERFAMILY SSF52777 447 627 5.0E-13 T 12-10-2018 M892_02785 bda8ace694fbc3c59d0c887fffe32e1b 958 Pfam PF00668 Condensation domain 446 699 3.7E-6 T 12-10-2018 IPR001242 Condensation domain M892_02785 bda8ace694fbc3c59d0c887fffe32e1b 958 Pfam PF00668 Condensation domain 4 434 3.2E-33 T 12-10-2018 IPR001242 Condensation domain M892_02785 bda8ace694fbc3c59d0c887fffe32e1b 958 Gene3D G3DSA:3.30.559.30 614 853 4.4E-23 T 12-10-2018 M892_02785 bda8ace694fbc3c59d0c887fffe32e1b 958 Gene3D G3DSA:3.30.559.30 182 439 3.5E-57 T 12-10-2018 M892_19195 08197555e66a8d4d059c7bc0b1358d11 254 Pfam PF00970 Oxidoreductase FAD-binding domain 22 95 1.8E-6 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 M892_19195 08197555e66a8d4d059c7bc0b1358d11 254 SUPERFAMILY SSF63380 10 102 1.67E-17 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel M892_19195 08197555e66a8d4d059c7bc0b1358d11 254 Gene3D G3DSA:2.40.30.10 2 102 5.5E-23 T 12-10-2018 M892_19195 08197555e66a8d4d059c7bc0b1358d11 254 SUPERFAMILY SSF52343 111 253 9.43E-36 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain M892_19195 08197555e66a8d4d059c7bc0b1358d11 254 Gene3D G3DSA:3.40.50.80 104 254 1.0E-39 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain M892_19195 08197555e66a8d4d059c7bc0b1358d11 254 Pfam PF00175 Oxidoreductase NAD-binding domain 118 229 1.7E-19 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 M892_10235 7ce9c6db6b6f638d50ca4ad6bb3844a9 173 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 6 164 1.1E-64 T 12-10-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 M892_10235 7ce9c6db6b6f638d50ca4ad6bb3844a9 173 Pfam PF01202 Shikimate kinase 13 132 5.3E-13 T 12-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 M892_10235 7ce9c6db6b6f638d50ca4ad6bb3844a9 173 Gene3D G3DSA:3.40.50.300 2 166 3.9E-66 T 12-10-2018 M892_10235 7ce9c6db6b6f638d50ca4ad6bb3844a9 173 SUPERFAMILY SSF52540 4 163 2.97E-26 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_13165 37c0343aec466d372ff5e6b962f97741 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 28.234 T 12-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 M892_13165 37c0343aec466d372ff5e6b962f97741 90 SUPERFAMILY SSF111148 1 89 1.57E-40 T 12-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 M892_13165 37c0343aec466d372ff5e6b962f97741 90 PIRSF PIRSF029827 1 90 1.6E-43 T 12-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 M892_13165 37c0343aec466d372ff5e6b962f97741 90 Gene3D G3DSA:1.10.3880.10 1 90 3.9E-39 T 12-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 M892_13165 37c0343aec466d372ff5e6b962f97741 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 76 6.0E-39 T 12-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 M892_13165 37c0343aec466d372ff5e6b962f97741 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 5.4E-42 T 12-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 M892_02210 a27d7dbed011c123d9b743d55716e9a9 513 SUPERFAMILY SSF46689 459 504 1.16E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_02210 a27d7dbed011c123d9b743d55716e9a9 513 Pfam PF02954 Bacterial regulatory protein, Fis family 463 499 7.1E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M892_02210 a27d7dbed011c123d9b743d55716e9a9 513 SUPERFAMILY SSF52172 3 186 6.97E-37 T 12-10-2018 IPR011006 CheY-like superfamily M892_02210 a27d7dbed011c123d9b743d55716e9a9 513 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 228 243 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 M892_02210 a27d7dbed011c123d9b743d55716e9a9 513 Gene3D G3DSA:1.10.8.60 314 394 3.9E-24 T 12-10-2018 M892_02210 a27d7dbed011c123d9b743d55716e9a9 513 SUPERFAMILY SSF52540 142 384 3.08E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_02210 a27d7dbed011c123d9b743d55716e9a9 513 SMART SM00382 162 304 4.0E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_02210 a27d7dbed011c123d9b743d55716e9a9 513 SMART SM00448 3 114 3.4E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_02210 a27d7dbed011c123d9b743d55716e9a9 513 Pfam PF00072 Response regulator receiver domain 5 114 2.6E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_02210 a27d7dbed011c123d9b743d55716e9a9 513 Gene3D G3DSA:3.40.50.300 134 313 1.0E-63 T 12-10-2018 M892_02210 a27d7dbed011c123d9b743d55716e9a9 513 Gene3D G3DSA:1.10.10.60 457 500 1.2E-7 T 12-10-2018 M892_02210 a27d7dbed011c123d9b743d55716e9a9 513 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 355 364 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site M892_02210 a27d7dbed011c123d9b743d55716e9a9 513 Pfam PF00158 Sigma-54 interaction domain 143 308 5.7E-68 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 M892_02210 a27d7dbed011c123d9b743d55716e9a9 513 Gene3D G3DSA:3.40.50.2300 1 133 1.3E-30 T 12-10-2018 M892_22180 1fd4caf8ee38dff08d8495658219fdb8 179 Gene3D G3DSA:1.20.950.20 2 83 1.6E-6 T 12-10-2018 M892_22180 1fd4caf8ee38dff08d8495658219fdb8 179 SUPERFAMILY SSF81342 4 175 3.61E-36 T 12-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 M892_22180 1fd4caf8ee38dff08d8495658219fdb8 179 Pfam PF01292 Prokaryotic cytochrome b561 8 176 7.6E-32 T 12-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 M892_07150 5ec8bccc6d8a3675bec79ba551d9db17 429 Pfam PF00860 Permease family 17 391 1.5E-54 T 12-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 M892_07150 5ec8bccc6d8a3675bec79ba551d9db17 429 PIRSF PIRSF005353 1 429 1.3E-186 T 12-10-2018 IPR026033 Purine permease PbuG-like M892_07065 e3cde27f64f5784057e87939d1980287 253 Pfam PF01618 MotA/TolQ/ExbB proton channel family 99 213 2.8E-21 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel M892_07065 e3cde27f64f5784057e87939d1980287 253 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 182 199 - T 12-10-2018 IPR000540 Flagellar motor protein MotA, conserved site M892_01115 afb4c68444b1a27ac9abf84872f50819 342 Pfam PF13551 Winged helix-turn helix 32 85 3.3E-7 T 12-10-2018 M892_01115 afb4c68444b1a27ac9abf84872f50819 342 Gene3D G3DSA:3.30.420.470 101 338 6.5E-14 T 12-10-2018 M892_01115 afb4c68444b1a27ac9abf84872f50819 342 Pfam PF13358 DDE superfamily endonuclease 163 305 4.4E-35 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_01115 afb4c68444b1a27ac9abf84872f50819 342 SUPERFAMILY SSF53098 219 302 7.89E-7 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_01115 afb4c68444b1a27ac9abf84872f50819 342 SUPERFAMILY SSF46689 15 108 1.91E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_26765 fda21aee14cd4183d1d340a1e17c2851 271 Hamap MF_01375 Phosphonoacetaldehyde hydrolase [phnX]. 1 271 142.8 T 12-10-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 M892_26765 fda21aee14cd4183d1d340a1e17c2851 271 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 205 2.6E-9 T 12-10-2018 M892_26765 fda21aee14cd4183d1d340a1e17c2851 271 TIGRFAM TIGR01422 phosphonatase: phosphonoacetaldehyde hydrolase 6 259 5.7E-118 T 12-10-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 M892_26765 fda21aee14cd4183d1d340a1e17c2851 271 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 73 205 5.5E-14 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M892_26765 fda21aee14cd4183d1d340a1e17c2851 271 Gene3D G3DSA:1.10.150.240 24 102 7.5E-97 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 M892_26765 fda21aee14cd4183d1d340a1e17c2851 271 SUPERFAMILY SSF56784 6 260 2.23E-52 T 12-10-2018 IPR036412 HAD-like superfamily M892_26765 fda21aee14cd4183d1d340a1e17c2851 271 Gene3D G3DSA:3.40.50.1000 8 271 7.5E-97 T 12-10-2018 IPR023214 HAD superfamily M892_23405 c6d3ba2e0473b6cf890989b601b9b1ef 347 Gene3D G3DSA:3.30.420.470 137 342 1.1E-11 T 12-10-2018 M892_23405 c6d3ba2e0473b6cf890989b601b9b1ef 347 SUPERFAMILY SSF53098 221 318 1.15E-7 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_23405 c6d3ba2e0473b6cf890989b601b9b1ef 347 SUPERFAMILY SSF46689 16 131 5.97E-24 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_23405 c6d3ba2e0473b6cf890989b601b9b1ef 347 Pfam PF13592 Winged helix-turn helix 98 155 7.3E-20 T 12-10-2018 IPR025959 Winged helix-turn helix domain M892_23405 c6d3ba2e0473b6cf890989b601b9b1ef 347 Pfam PF13358 DDE superfamily endonuclease 169 312 2.4E-34 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_23405 c6d3ba2e0473b6cf890989b601b9b1ef 347 Pfam PF13384 Homeodomain-like domain 28 67 9.1E-6 T 12-10-2018 M892_26510 c6d3ba2e0473b6cf890989b601b9b1ef 347 Gene3D G3DSA:3.30.420.470 137 342 1.1E-11 T 12-10-2018 M892_26510 c6d3ba2e0473b6cf890989b601b9b1ef 347 SUPERFAMILY SSF53098 221 318 1.15E-7 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_26510 c6d3ba2e0473b6cf890989b601b9b1ef 347 SUPERFAMILY SSF46689 16 131 5.97E-24 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_26510 c6d3ba2e0473b6cf890989b601b9b1ef 347 Pfam PF13592 Winged helix-turn helix 98 155 7.3E-20 T 12-10-2018 IPR025959 Winged helix-turn helix domain M892_26510 c6d3ba2e0473b6cf890989b601b9b1ef 347 Pfam PF13358 DDE superfamily endonuclease 169 312 2.4E-34 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_26510 c6d3ba2e0473b6cf890989b601b9b1ef 347 Pfam PF13384 Homeodomain-like domain 28 67 9.1E-6 T 12-10-2018 M892_23835 c6d3ba2e0473b6cf890989b601b9b1ef 347 Gene3D G3DSA:3.30.420.470 137 342 1.1E-11 T 12-10-2018 M892_23835 c6d3ba2e0473b6cf890989b601b9b1ef 347 SUPERFAMILY SSF53098 221 318 1.15E-7 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_23835 c6d3ba2e0473b6cf890989b601b9b1ef 347 SUPERFAMILY SSF46689 16 131 5.97E-24 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_23835 c6d3ba2e0473b6cf890989b601b9b1ef 347 Pfam PF13592 Winged helix-turn helix 98 155 7.3E-20 T 12-10-2018 IPR025959 Winged helix-turn helix domain M892_23835 c6d3ba2e0473b6cf890989b601b9b1ef 347 Pfam PF13358 DDE superfamily endonuclease 169 312 2.4E-34 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_23835 c6d3ba2e0473b6cf890989b601b9b1ef 347 Pfam PF13384 Homeodomain-like domain 28 67 9.1E-6 T 12-10-2018 M892_03990 6ecf77fc220f7e52100483f916fde0a3 211 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 120 206 19.491 T 12-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 M892_03990 6ecf77fc220f7e52100483f916fde0a3 211 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 123 206 7.1E-32 T 12-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 M892_03990 6ecf77fc220f7e52100483f916fde0a3 211 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 13 211 37.536 T 12-10-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 M892_03990 6ecf77fc220f7e52100483f916fde0a3 211 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 38 110 1.7E-31 T 12-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 M892_03990 6ecf77fc220f7e52100483f916fde0a3 211 Gene3D G3DSA:3.10.20.400 3 102 2.2E-36 T 12-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 M892_03990 6ecf77fc220f7e52100483f916fde0a3 211 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 123 210 4.4E-18 T 12-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 M892_03990 6ecf77fc220f7e52100483f916fde0a3 211 SUPERFAMILY SSF141734 14 122 4.05E-45 T 12-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 M892_03990 6ecf77fc220f7e52100483f916fde0a3 211 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 61 110 7.0E-22 T 12-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 M892_03990 6ecf77fc220f7e52100483f916fde0a3 211 Gene3D G3DSA:1.10.287.1080 120 211 9.5E-30 T 12-10-2018 M892_03990 6ecf77fc220f7e52100483f916fde0a3 211 SUPERFAMILY SSF101386 123 210 1.72E-25 T 12-10-2018 M892_18050 3be859927a80ab844d93be6f10589477 289 Pfam PF03466 LysR substrate binding domain 88 288 8.7E-48 T 12-10-2018 IPR005119 LysR, substrate-binding M892_18050 3be859927a80ab844d93be6f10589477 289 Gene3D G3DSA:1.10.10.10 3 91 9.5E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_18050 3be859927a80ab844d93be6f10589477 289 SUPERFAMILY SSF53850 89 288 1.99E-48 T 12-10-2018 M892_18050 3be859927a80ab844d93be6f10589477 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 63 7.2E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_18050 3be859927a80ab844d93be6f10589477 289 Gene3D G3DSA:3.40.190.290 92 288 1.3E-69 T 12-10-2018 M892_18050 3be859927a80ab844d93be6f10589477 289 SUPERFAMILY SSF46785 4 87 8.26E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_21175 c40059a63f81f2302f06b00bd8d3b31c 155 SUPERFAMILY SSF82784 1 153 1.44E-48 T 12-10-2018 IPR036102 OsmC/Ohr superfamily M892_21175 c40059a63f81f2302f06b00bd8d3b31c 155 Gene3D G3DSA:3.30.300.20 1 154 4.8E-50 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta M892_21175 c40059a63f81f2302f06b00bd8d3b31c 155 Pfam PF02566 OsmC-like protein 55 152 8.3E-16 T 12-10-2018 IPR003718 OsmC/Ohr family M892_27785 44c80a527df4f2e8def923d4fcc0434f 306 Gene3D G3DSA:3.40.190.290 95 291 3.9E-34 T 12-10-2018 M892_27785 44c80a527df4f2e8def923d4fcc0434f 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 7.6E-14 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_27785 44c80a527df4f2e8def923d4fcc0434f 306 SUPERFAMILY SSF46785 7 91 1.09E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_27785 44c80a527df4f2e8def923d4fcc0434f 306 Gene3D G3DSA:1.10.10.10 7 94 7.9E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_27785 44c80a527df4f2e8def923d4fcc0434f 306 SUPERFAMILY SSF53850 91 290 6.36E-30 T 12-10-2018 M892_27785 44c80a527df4f2e8def923d4fcc0434f 306 Pfam PF03466 LysR substrate binding domain 91 290 5.8E-27 T 12-10-2018 IPR005119 LysR, substrate-binding M892_12140 8771d4fba3dfdc5339ee9fa8f4d9097a 87 Gene3D G3DSA:2.30.30.100 1 72 4.7E-35 T 12-10-2018 M892_12140 8771d4fba3dfdc5339ee9fa8f4d9097a 87 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.727 T 12-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 M892_12140 8771d4fba3dfdc5339ee9fa8f4d9097a 87 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 6.8E-30 T 12-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 M892_12140 8771d4fba3dfdc5339ee9fa8f4d9097a 87 Pfam PF17209 Hfq protein 7 69 1.7E-31 T 12-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 M892_12140 8771d4fba3dfdc5339ee9fa8f4d9097a 87 SUPERFAMILY SSF50182 7 69 1.19E-24 T 12-10-2018 IPR010920 LSM domain superfamily M892_24310 e88ed1de5e3eec8820865cadd9e6646e 300 SUPERFAMILY SSF103481 48 142 7.06E-7 T 12-10-2018 M892_24310 e88ed1de5e3eec8820865cadd9e6646e 300 Pfam PF00892 EamA-like transporter family 10 139 2.9E-6 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M892_24310 e88ed1de5e3eec8820865cadd9e6646e 300 Pfam PF00892 EamA-like transporter family 160 287 2.1E-12 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M892_24310 e88ed1de5e3eec8820865cadd9e6646e 300 SUPERFAMILY SSF103481 194 290 1.44E-8 T 12-10-2018 M892_13730 c0bd4fc442511d6546f45a8fa9ac4775 289 Pfam PF01478 Type IV leader peptidase family 135 244 2.6E-26 T 12-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 M892_13730 c0bd4fc442511d6546f45a8fa9ac4775 289 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 17 124 1.8E-33 T 12-10-2018 IPR010627 Peptidase A24A, N-terminal M892_13730 c0bd4fc442511d6546f45a8fa9ac4775 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 143 160 3.2E-30 T 12-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial M892_13730 c0bd4fc442511d6546f45a8fa9ac4775 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 201 211 3.2E-30 T 12-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial M892_13730 c0bd4fc442511d6546f45a8fa9ac4775 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 224 239 3.2E-30 T 12-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial M892_13730 c0bd4fc442511d6546f45a8fa9ac4775 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 212 223 3.2E-30 T 12-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial M892_26000 2c062e92a5a48e8a1dbbae100527fcab 851 Pfam PF10145 Phage-related minor tail protein 88 284 1.2E-26 T 12-10-2018 IPR010090 Phage tail tape measure protein M892_26000 2c062e92a5a48e8a1dbbae100527fcab 851 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 49 389 1.5E-24 T 12-10-2018 IPR010090 Phage tail tape measure protein M892_18075 2e111a93786a9d3b5b78ec613de02bb0 296 Gene3D G3DSA:1.10.10.10 8 94 4.5E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_18075 2e111a93786a9d3b5b78ec613de02bb0 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 69 8.4E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_18075 2e111a93786a9d3b5b78ec613de02bb0 296 Pfam PF03466 LysR substrate binding domain 95 292 2.8E-28 T 12-10-2018 IPR005119 LysR, substrate-binding M892_18075 2e111a93786a9d3b5b78ec613de02bb0 296 SUPERFAMILY SSF46785 3 117 1.95E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_18075 2e111a93786a9d3b5b78ec613de02bb0 296 Gene3D G3DSA:3.40.190.290 97 295 3.2E-41 T 12-10-2018 M892_18075 2e111a93786a9d3b5b78ec613de02bb0 296 SUPERFAMILY SSF53850 95 294 7.96E-31 T 12-10-2018 M892_02980 09f9a4ac73337fc85645911c3d1df79e 231 Pfam PF10979 Protein of unknown function (DUF2786) 5 42 2.8E-12 T 12-10-2018 IPR024498 Domain of unknown function DUF2786 M892_02980 09f9a4ac73337fc85645911c3d1df79e 231 PIRSF PIRSF028111 1 230 1.6E-84 T 12-10-2018 IPR016868 Bacteriophage B3, Orf5 M892_22635 a55e522ec3a2e7cd9ab77563e121859e 145 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 20 135 6.3E-39 T 12-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 M892_22635 a55e522ec3a2e7cd9ab77563e121859e 145 SUPERFAMILY SSF54637 1 139 6.47E-32 T 12-10-2018 IPR029069 HotDog domain superfamily M892_22635 a55e522ec3a2e7cd9ab77563e121859e 145 Gene3D G3DSA:3.10.129.10 1 143 4.7E-57 T 12-10-2018 M892_22635 a55e522ec3a2e7cd9ab77563e121859e 145 Pfam PF03061 Thioesterase superfamily 52 128 6.3E-16 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 M892_16720 b4865c9b9a97d85fcf40bb08ea49d5db 251 SUPERFAMILY SSF53335 15 250 3.29E-39 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M892_16720 b4865c9b9a97d85fcf40bb08ea49d5db 251 Pfam PF13649 Methyltransferase domain 43 136 1.7E-17 T 12-10-2018 M892_16720 b4865c9b9a97d85fcf40bb08ea49d5db 251 Gene3D G3DSA:2.20.25.110 146 209 1.6E-41 T 12-10-2018 M892_16720 b4865c9b9a97d85fcf40bb08ea49d5db 251 Gene3D G3DSA:3.40.50.150 15 248 1.6E-41 T 12-10-2018 M892_05550 c1099e3078bc75f41244ec3521516569 139 SUPERFAMILY SSF54631 1 127 4.55E-30 T 12-10-2018 M892_05550 c1099e3078bc75f41244ec3521516569 139 Gene3D G3DSA:3.10.580.10 1 129 3.0E-29 T 12-10-2018 M892_05550 c1099e3078bc75f41244ec3521516569 139 Pfam PF00571 CBS domain 73 127 3.4E-12 T 12-10-2018 IPR000644 CBS domain M892_05550 c1099e3078bc75f41244ec3521516569 139 Pfam PF00571 CBS domain 6 61 6.2E-7 T 12-10-2018 IPR000644 CBS domain M892_05550 c1099e3078bc75f41244ec3521516569 139 SMART SM00116 80 128 5.1E-8 T 12-10-2018 IPR000644 CBS domain M892_05550 c1099e3078bc75f41244ec3521516569 139 SMART SM00116 13 61 0.43 T 12-10-2018 IPR000644 CBS domain M892_07905 25b3422d7275e4db0155ebcc745f24bb 392 SUPERFAMILY SSF53850 109 295 6.3E-56 T 12-10-2018 M892_07905 25b3422d7275e4db0155ebcc745f24bb 392 Gene3D G3DSA:3.40.190.10 113 287 6.9E-55 T 12-10-2018 M892_07905 25b3422d7275e4db0155ebcc745f24bb 392 SMART SM00830 12 93 6.2E-21 T 12-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 M892_07905 25b3422d7275e4db0155ebcc745f24bb 392 TIGRFAM TIGR01797 CM_P_1: chorismate mutase 9 91 3.5E-27 T 12-10-2018 IPR010952 Chorismate mutase, gammaproteobacteria GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 M892_07905 25b3422d7275e4db0155ebcc745f24bb 392 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 329 336 - T 12-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 M892_07905 25b3422d7275e4db0155ebcc745f24bb 392 SUPERFAMILY SSF48600 7 95 1.41E-18 T 12-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 M892_07905 25b3422d7275e4db0155ebcc745f24bb 392 Pfam PF00800 Prephenate dehydratase 110 291 2.5E-60 T 12-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 M892_07905 25b3422d7275e4db0155ebcc745f24bb 392 Gene3D G3DSA:3.40.190.10 193 278 6.9E-55 T 12-10-2018 M892_07905 25b3422d7275e4db0155ebcc745f24bb 392 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 265 287 - T 12-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 M892_07905 25b3422d7275e4db0155ebcc745f24bb 392 PIRSF PIRSF001500 1 384 9.8E-141 T 12-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 M892_07905 25b3422d7275e4db0155ebcc745f24bb 392 Pfam PF01817 Chorismate mutase type II 12 91 2.9E-16 T 12-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 M892_07905 25b3422d7275e4db0155ebcc745f24bb 392 Gene3D G3DSA:1.20.59.10 3 112 2.0E-30 T 12-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 M892_07905 25b3422d7275e4db0155ebcc745f24bb 392 SUPERFAMILY SSF55021 284 381 7.2E-26 T 12-10-2018 M892_07905 25b3422d7275e4db0155ebcc745f24bb 392 Gene3D G3DSA:3.30.70.260 295 383 1.9E-24 T 12-10-2018 M892_17030 7b8ed48dd22fd684d72b47d856063288 98 SUPERFAMILY SSF54909 1 98 3.58E-32 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel M892_17030 7b8ed48dd22fd684d72b47d856063288 98 Pfam PF03795 YCII-related domain 1 95 2.5E-30 T 12-10-2018 IPR005545 YCII-related M892_17030 7b8ed48dd22fd684d72b47d856063288 98 Gene3D G3DSA:3.30.70.1060 1 98 1.7E-38 T 12-10-2018 M892_05615 8f9293b34fe8f2a59fdc22b367878b4a 97 SMART SM00418 10 91 6.1E-9 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M892_05615 8f9293b34fe8f2a59fdc22b367878b4a 97 Gene3D G3DSA:1.10.10.10 1 92 9.9E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_05615 8f9293b34fe8f2a59fdc22b367878b4a 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 62 77 4.1E-9 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M892_05615 8f9293b34fe8f2a59fdc22b367878b4a 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 47 62 4.1E-9 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M892_05615 8f9293b34fe8f2a59fdc22b367878b4a 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 12 27 4.1E-9 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M892_05615 8f9293b34fe8f2a59fdc22b367878b4a 97 SUPERFAMILY SSF46785 6 94 1.12E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_05615 8f9293b34fe8f2a59fdc22b367878b4a 97 Pfam PF12840 Helix-turn-helix domain 10 71 5.1E-8 T 12-10-2018 M892_02590 42a0a9d1dc25c3b2d7e19eb134e053e8 75 Gene3D G3DSA:3.40.30.10 2 75 5.1E-15 T 12-10-2018 M892_02590 42a0a9d1dc25c3b2d7e19eb134e053e8 75 Pfam PF00462 Glutaredoxin 4 60 5.6E-11 T 12-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 M892_02590 42a0a9d1dc25c3b2d7e19eb134e053e8 75 SUPERFAMILY SSF52833 3 68 4.49E-13 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M892_02590 42a0a9d1dc25c3b2d7e19eb134e053e8 75 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 12-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 M892_19735 db362958fd423e6b763f0ac36ffd3d9d 354 TIGRFAM TIGR00520 asnASE_II: L-asparaginase, type II 14 354 6.8E-163 T 12-10-2018 IPR004550 L-asparaginase, type II GO:0004067|GO:0006528 M892_19735 db362958fd423e6b763f0ac36ffd3d9d 354 Pfam PF00710 Asparaginase, N-terminal 29 222 8.2E-63 T 12-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 M892_19735 db362958fd423e6b763f0ac36ffd3d9d 354 SMART SM00870 29 348 5.0E-149 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 M892_19735 db362958fd423e6b763f0ac36ffd3d9d 354 SUPERFAMILY SSF53774 27 353 4.45E-109 T 12-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 M892_19735 db362958fd423e6b763f0ac36ffd3d9d 354 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 32 40 - T 12-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 M892_19735 db362958fd423e6b763f0ac36ffd3d9d 354 PRINTS PR00139 Asparaginase/glutaminase family signature 288 306 1.4E-23 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 M892_19735 db362958fd423e6b763f0ac36ffd3d9d 354 PRINTS PR00139 Asparaginase/glutaminase family signature 30 41 1.4E-23 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 M892_19735 db362958fd423e6b763f0ac36ffd3d9d 354 PRINTS PR00139 Asparaginase/glutaminase family signature 109 127 1.4E-23 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 M892_19735 db362958fd423e6b763f0ac36ffd3d9d 354 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 110 120 - T 12-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 M892_19735 db362958fd423e6b763f0ac36ffd3d9d 354 Gene3D G3DSA:3.40.50.1170 25 240 2.3E-87 T 12-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 M892_19735 db362958fd423e6b763f0ac36ffd3d9d 354 PIRSF PIRSF500176 26 354 6.5E-83 T 12-10-2018 M892_19735 db362958fd423e6b763f0ac36ffd3d9d 354 Gene3D G3DSA:3.40.50.40 241 354 4.4E-42 T 12-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 M892_19735 db362958fd423e6b763f0ac36ffd3d9d 354 PIRSF PIRSF001220 24 354 1.9E-96 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 M892_06295 1e9fa8f0d38907fd16aed15c1c86027f 548 Gene3D G3DSA:3.40.120.10 221 318 4.3E-45 T 12-10-2018 M892_06295 1e9fa8f0d38907fd16aed15c1c86027f 548 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 317 8.7E-18 T 12-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M892_06295 1e9fa8f0d38907fd16aed15c1c86027f 548 SUPERFAMILY SSF53738 209 317 2.59E-8 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M892_06295 1e9fa8f0d38907fd16aed15c1c86027f 548 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 1 543 0.0 T 12-10-2018 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6317|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-6981|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7900|MetaCyc: PWY-7902 M892_06295 1e9fa8f0d38907fd16aed15c1c86027f 548 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 320 438 2.2E-28 T 12-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M892_06295 1e9fa8f0d38907fd16aed15c1c86027f 548 SUPERFAMILY SSF53738 305 446 8.24E-31 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M892_06295 1e9fa8f0d38907fd16aed15c1c86027f 548 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 12-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M892_06295 1e9fa8f0d38907fd16aed15c1c86027f 548 Gene3D G3DSA:3.30.310.50 443 546 5.6E-35 T 12-10-2018 M892_06295 1e9fa8f0d38907fd16aed15c1c86027f 548 SUPERFAMILY SSF53738 27 235 5.65E-52 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M892_06295 1e9fa8f0d38907fd16aed15c1c86027f 548 Gene3D G3DSA:3.40.120.10 12 218 1.8E-75 T 12-10-2018 M892_06295 1e9fa8f0d38907fd16aed15c1c86027f 548 Gene3D G3DSA:3.40.120.10 319 442 8.9E-35 T 12-10-2018 M892_06295 1e9fa8f0d38907fd16aed15c1c86027f 548 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 490 537 1.8E-8 T 12-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M892_06295 1e9fa8f0d38907fd16aed15c1c86027f 548 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 40 179 4.5E-40 T 12-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M892_06295 1e9fa8f0d38907fd16aed15c1c86027f 548 SUPERFAMILY SSF55957 433 543 5.41E-20 T 12-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M892_09080 f434fd5ca6ada3fcf83558168e6376a3 206 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 3 108 8.7E-24 T 12-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 M892_09080 f434fd5ca6ada3fcf83558168e6376a3 206 Gene3D G3DSA:3.10.50.40 69 206 9.3E-50 T 12-10-2018 M892_09080 f434fd5ca6ada3fcf83558168e6376a3 206 SUPERFAMILY SSF54534 7 205 5.11E-54 T 12-10-2018 M892_09080 f434fd5ca6ada3fcf83558168e6376a3 206 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 117 203 1.4E-26 T 12-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain M892_09080 f434fd5ca6ada3fcf83558168e6376a3 206 Gene3D G3DSA:1.10.287.460 4 68 2.6E-19 T 12-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 M892_02830 56b2473addfbd13558d49d2fa225d888 806 Pfam PF03484 tRNA synthetase B5 domain 406 476 1.1E-16 T 12-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 M892_02830 56b2473addfbd13558d49d2fa225d888 806 Pfam PF03147 Ferredoxin-fold anticodon binding domain 712 805 1.3E-28 T 12-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 M892_02830 56b2473addfbd13558d49d2fa225d888 806 Gene3D G3DSA:3.30.70.380 713 806 1.7E-29 T 12-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 M892_02830 56b2473addfbd13558d49d2fa225d888 806 SMART SM00873 212 385 3.7E-100 T 12-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 M892_02830 56b2473addfbd13558d49d2fa225d888 806 SMART SM00896 712 805 1.4E-45 T 12-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 M892_02830 56b2473addfbd13558d49d2fa225d888 806 Gene3D G3DSA:3.30.56.10 7 179 1.5E-69 T 12-10-2018 M892_02830 56b2473addfbd13558d49d2fa225d888 806 Gene3D G3DSA:3.50.40.10 197 395 1.0E-83 T 12-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 M892_02830 56b2473addfbd13558d49d2fa225d888 806 SUPERFAMILY SSF46955 403 480 7.69E-18 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily M892_02830 56b2473addfbd13558d49d2fa225d888 806 Gene3D G3DSA:3.30.56.10 401 480 4.4E-24 T 12-10-2018 M892_02830 56b2473addfbd13558d49d2fa225d888 806 SUPERFAMILY SSF56037 196 394 5.23E-78 T 12-10-2018 M892_02830 56b2473addfbd13558d49d2fa225d888 806 SUPERFAMILY SSF55681 472 700 4.12E-47 T 12-10-2018 M892_02830 56b2473addfbd13558d49d2fa225d888 806 SUPERFAMILY SSF50249 38 196 2.37E-47 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M892_02830 56b2473addfbd13558d49d2fa225d888 806 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 799 46.063 T 12-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 M892_02830 56b2473addfbd13558d49d2fa225d888 806 Pfam PF03483 B3/4 domain 212 385 1.3E-71 T 12-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 M892_02830 56b2473addfbd13558d49d2fa225d888 806 Gene3D G3DSA:2.40.50.140 39 154 1.5E-69 T 12-10-2018 M892_02830 56b2473addfbd13558d49d2fa225d888 806 Gene3D G3DSA:3.30.930.10 490 702 5.6E-57 T 12-10-2018 M892_02830 56b2473addfbd13558d49d2fa225d888 806 SUPERFAMILY SSF54991 708 805 2.62E-30 T 12-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 M892_02830 56b2473addfbd13558d49d2fa225d888 806 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 805 8.4E-272 T 12-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 M892_02830 56b2473addfbd13558d49d2fa225d888 806 Pfam PF01588 Putative tRNA binding domain 45 145 2.2E-25 T 12-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 M892_02830 56b2473addfbd13558d49d2fa225d888 806 SMART SM00874 403 476 2.1E-28 T 12-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 M892_22395 ae733001ed5540648429fae0d32c44f6 667 SUPERFAMILY SSF56112 44 271 2.83E-36 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily M892_22395 ae733001ed5540648429fae0d32c44f6 667 Pfam PF00069 Protein kinase domain 63 244 7.5E-30 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 M892_22395 ae733001ed5540648429fae0d32c44f6 667 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 167 179 - T 12-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 M892_22395 ae733001ed5540648429fae0d32c44f6 667 Gene3D G3DSA:1.10.510.10 27 303 8.3E-35 T 12-10-2018 M892_22395 ae733001ed5540648429fae0d32c44f6 667 SMART SM00220 46 305 3.9E-12 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 M892_06670 b324d5d5db6ff093356cd5b643aeb550 898 Gene3D G3DSA:2.70.150.20 371 487 2.4E-36 T 12-10-2018 M892_06670 b324d5d5db6ff093356cd5b643aeb550 898 SUPERFAMILY SSF56784 583 889 1.47E-59 T 12-10-2018 IPR036412 HAD-like superfamily M892_06670 b324d5d5db6ff093356cd5b643aeb550 898 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 587 593 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 M892_06670 b324d5d5db6ff093356cd5b643aeb550 898 Pfam PF00702 haloacid dehalogenase-like hydrolase 581 797 5.2E-49 T 12-10-2018 M892_06670 b324d5d5db6ff093356cd5b643aeb550 898 Gene3D G3DSA:3.30.70.100 1 65 3.6E-7 T 12-10-2018 M892_06670 b324d5d5db6ff093356cd5b643aeb550 898 Gene3D G3DSA:3.30.70.100 160 228 7.1E-19 T 12-10-2018 M892_06670 b324d5d5db6ff093356cd5b643aeb550 898 Gene3D G3DSA:3.40.1110.10 596 715 5.1E-95 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 M892_06670 b324d5d5db6ff093356cd5b643aeb550 898 ProSitePatterns PS01047 Heavy-metal-associated domain. 164 193 - T 12-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 M892_06670 b324d5d5db6ff093356cd5b643aeb550 898 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 316 892 1.5E-183 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 M892_06670 b324d5d5db6ff093356cd5b643aeb550 898 ProSitePatterns PS01229 Hypothetical cof family signature 2. 783 805 - T 12-10-2018 M892_06670 b324d5d5db6ff093356cd5b643aeb550 898 SUPERFAMILY SSF55008 65 126 4.58E-6 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 M892_06670 b324d5d5db6ff093356cd5b643aeb550 898 SUPERFAMILY SSF55008 159 228 1.18E-16 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 M892_06670 b324d5d5db6ff093356cd5b643aeb550 898 SUPERFAMILY SSF81653 386 483 1.57E-24 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 M892_06670 b324d5d5db6ff093356cd5b643aeb550 898 Pfam PF00122 E1-E2 ATPase 384 564 5.3E-48 T 12-10-2018 M892_06670 b324d5d5db6ff093356cd5b643aeb550 898 Gene3D G3DSA:3.40.50.1000 566 835 5.1E-95 T 12-10-2018 IPR023214 HAD superfamily M892_06670 b324d5d5db6ff093356cd5b643aeb550 898 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 708 719 5.0E-28 T 12-10-2018 M892_06670 b324d5d5db6ff093356cd5b643aeb550 898 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 806 818 5.0E-28 T 12-10-2018 M892_06670 b324d5d5db6ff093356cd5b643aeb550 898 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 433 447 5.0E-28 T 12-10-2018 M892_06670 b324d5d5db6ff093356cd5b643aeb550 898 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 585 599 5.0E-28 T 12-10-2018 M892_06670 b324d5d5db6ff093356cd5b643aeb550 898 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 730 740 5.0E-28 T 12-10-2018 M892_06670 b324d5d5db6ff093356cd5b643aeb550 898 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 783 802 5.0E-28 T 12-10-2018 M892_06670 b324d5d5db6ff093356cd5b643aeb550 898 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 355 861 5.0E-93 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 M892_06670 b324d5d5db6ff093356cd5b643aeb550 898 PRINTS PR00943 Copper-transporting ATPase signature 301 320 3.5E-12 T 12-10-2018 M892_06670 b324d5d5db6ff093356cd5b643aeb550 898 PRINTS PR00943 Copper-transporting ATPase signature 373 391 3.5E-12 T 12-10-2018 M892_06670 b324d5d5db6ff093356cd5b643aeb550 898 PRINTS PR00943 Copper-transporting ATPase signature 760 777 3.5E-12 T 12-10-2018 M892_06670 b324d5d5db6ff093356cd5b643aeb550 898 PRINTS PR00943 Copper-transporting ATPase signature 174 188 3.5E-12 T 12-10-2018 M892_06670 b324d5d5db6ff093356cd5b643aeb550 898 PRINTS PR00943 Copper-transporting ATPase signature 856 870 3.5E-12 T 12-10-2018 M892_06670 b324d5d5db6ff093356cd5b643aeb550 898 PRINTS PR00943 Copper-transporting ATPase signature 506 520 3.5E-12 T 12-10-2018 M892_06670 b324d5d5db6ff093356cd5b643aeb550 898 PRINTS PR00943 Copper-transporting ATPase signature 568 583 3.5E-12 T 12-10-2018 M892_06670 b324d5d5db6ff093356cd5b643aeb550 898 Pfam PF00403 Heavy-metal-associated domain 6 61 6.2E-7 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 M892_06670 b324d5d5db6ff093356cd5b643aeb550 898 Pfam PF00403 Heavy-metal-associated domain 164 222 3.3E-11 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 M892_06670 b324d5d5db6ff093356cd5b643aeb550 898 SUPERFAMILY SSF81665 350 850 1.02E-9 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 M892_06670 b324d5d5db6ff093356cd5b643aeb550 898 SUPERFAMILY SSF55008 1 62 2.09E-8 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 M892_06670 b324d5d5db6ff093356cd5b643aeb550 898 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 297 893 3.1E-183 T 12-10-2018 M892_21985 083ca9f689ed14d0bc92f0a0befab12e 241 SUPERFAMILY SSF46689 9 87 5.64E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_21985 083ca9f689ed14d0bc92f0a0befab12e 241 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 67 2.6E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M892_21985 083ca9f689ed14d0bc92f0a0befab12e 241 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 2.6E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M892_21985 083ca9f689ed14d0bc92f0a0befab12e 241 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 2.6E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M892_21985 083ca9f689ed14d0bc92f0a0befab12e 241 Gene3D G3DSA:1.10.357.10 1 200 1.9E-24 T 12-10-2018 M892_10950 ee5167b5865193d1eec575bcb078d353 151 Pfam PF07681 DoxX 27 108 3.2E-18 T 12-10-2018 IPR032808 DoxX family M892_11505 1687697d4ef85ae8bb0659ba67738f4e 182 Pfam PF00467 KOW motif 131 162 4.8E-7 T 12-10-2018 IPR005824 KOW M892_11505 1687697d4ef85ae8bb0659ba67738f4e 182 Pfam PF02357 Transcription termination factor nusG 7 112 2.0E-26 T 12-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 M892_11505 1687697d4ef85ae8bb0659ba67738f4e 182 SMART SM00738 6 115 2.2E-49 T 12-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 M892_11505 1687697d4ef85ae8bb0659ba67738f4e 182 Gene3D G3DSA:2.30.30.30 123 181 3.0E-25 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 M892_11505 1687697d4ef85ae8bb0659ba67738f4e 182 PRINTS PR00338 Transcription termination factor NUSG signature 139 154 6.8E-22 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 M892_11505 1687697d4ef85ae8bb0659ba67738f4e 182 PRINTS PR00338 Transcription termination factor NUSG signature 157 173 6.8E-22 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 M892_11505 1687697d4ef85ae8bb0659ba67738f4e 182 PRINTS PR00338 Transcription termination factor NUSG signature 61 73 6.8E-22 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 M892_11505 1687697d4ef85ae8bb0659ba67738f4e 182 ProSitePatterns PS01014 Transcription termination factor nusG signature. 164 173 - T 12-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site M892_11505 1687697d4ef85ae8bb0659ba67738f4e 182 SUPERFAMILY SSF82679 6 116 1.1E-39 T 12-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 M892_11505 1687697d4ef85ae8bb0659ba67738f4e 182 SUPERFAMILY SSF50104 126 181 3.31E-19 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily M892_11505 1687697d4ef85ae8bb0659ba67738f4e 182 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 6 181 25.574 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 M892_11505 1687697d4ef85ae8bb0659ba67738f4e 182 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 9 181 3.3E-70 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 M892_11505 1687697d4ef85ae8bb0659ba67738f4e 182 Gene3D G3DSA:3.30.70.940 1 122 6.3E-47 T 12-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 M892_11505 1687697d4ef85ae8bb0659ba67738f4e 182 SMART SM00739 127 154 3.9E-4 T 12-10-2018 IPR005824 KOW M892_09830 b99783bed01c0bcf8a7262dffbf09262 680 Gene3D G3DSA:3.30.1370.120 263 342 9.1E-17 T 12-10-2018 IPR038591 NolW-like superfamily M892_09830 b99783bed01c0bcf8a7262dffbf09262 680 Gene3D G3DSA:3.30.1370.120 21 185 4.4E-52 T 12-10-2018 IPR038591 NolW-like superfamily M892_09830 b99783bed01c0bcf8a7262dffbf09262 680 Gene3D G3DSA:3.30.1370.120 188 258 2.1E-20 T 12-10-2018 IPR038591 NolW-like superfamily M892_09830 b99783bed01c0bcf8a7262dffbf09262 680 Pfam PF03958 Bacterial type II/III secretion system short domain 266 344 1.9E-17 T 12-10-2018 IPR005644 NolW-like M892_09830 b99783bed01c0bcf8a7262dffbf09262 680 Pfam PF03958 Bacterial type II/III secretion system short domain 125 186 7.6E-9 T 12-10-2018 IPR005644 NolW-like M892_09830 b99783bed01c0bcf8a7262dffbf09262 680 Pfam PF03958 Bacterial type II/III secretion system short domain 191 258 7.5E-16 T 12-10-2018 IPR005644 NolW-like M892_09830 b99783bed01c0bcf8a7262dffbf09262 680 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 30 625 7.9E-160 T 12-10-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 M892_09830 b99783bed01c0bcf8a7262dffbf09262 680 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 561 594 - T 12-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 M892_09830 b99783bed01c0bcf8a7262dffbf09262 680 PRINTS PR00811 Bacterial general secretion pathway protein D signature 450 474 2.3E-38 T 12-10-2018 IPR001775 GspD/PilQ family M892_09830 b99783bed01c0bcf8a7262dffbf09262 680 PRINTS PR00811 Bacterial general secretion pathway protein D signature 485 495 2.3E-38 T 12-10-2018 IPR001775 GspD/PilQ family M892_09830 b99783bed01c0bcf8a7262dffbf09262 680 PRINTS PR00811 Bacterial general secretion pathway protein D signature 580 598 2.3E-38 T 12-10-2018 IPR001775 GspD/PilQ family M892_09830 b99783bed01c0bcf8a7262dffbf09262 680 PRINTS PR00811 Bacterial general secretion pathway protein D signature 344 354 2.3E-38 T 12-10-2018 IPR001775 GspD/PilQ family M892_09830 b99783bed01c0bcf8a7262dffbf09262 680 PRINTS PR00811 Bacterial general secretion pathway protein D signature 603 617 2.3E-38 T 12-10-2018 IPR001775 GspD/PilQ family M892_09830 b99783bed01c0bcf8a7262dffbf09262 680 PRINTS PR01032 Gene IV protein signature 596 618 2.2E-13 T 12-10-2018 M892_09830 b99783bed01c0bcf8a7262dffbf09262 680 PRINTS PR01032 Gene IV protein signature 543 571 2.2E-13 T 12-10-2018 M892_09830 b99783bed01c0bcf8a7262dffbf09262 680 PRINTS PR01032 Gene IV protein signature 475 498 2.2E-13 T 12-10-2018 M892_09830 b99783bed01c0bcf8a7262dffbf09262 680 Pfam PF00263 Bacterial type II and III secretion system protein 454 616 1.8E-50 T 12-10-2018 IPR004846 Type II/III secretion system GO:0009306 M892_24345 48c84820be4600a90f20d0220a0fff72 159 PIRSF PIRSF005900 1 159 2.2E-45 T 12-10-2018 IPR002177 DNA-binding protein Dps M892_24345 48c84820be4600a90f20d0220a0fff72 159 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 135 153 7.0E-14 T 12-10-2018 IPR002177 DNA-binding protein Dps M892_24345 48c84820be4600a90f20d0220a0fff72 159 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 40 56 7.0E-14 T 12-10-2018 IPR002177 DNA-binding protein Dps M892_24345 48c84820be4600a90f20d0220a0fff72 159 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 64 80 7.0E-14 T 12-10-2018 IPR002177 DNA-binding protein Dps M892_24345 48c84820be4600a90f20d0220a0fff72 159 SUPERFAMILY SSF47240 4 158 1.69E-43 T 12-10-2018 IPR009078 Ferritin-like superfamily M892_24345 48c84820be4600a90f20d0220a0fff72 159 ProSitePatterns PS00819 Dps protein family signature 2. 66 80 - T 12-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 M892_24345 48c84820be4600a90f20d0220a0fff72 159 ProSitePatterns PS00818 Dps protein family signature 1. 40 56 - T 12-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 M892_24345 48c84820be4600a90f20d0220a0fff72 159 Pfam PF00210 Ferritin-like domain 20 158 4.2E-24 T 12-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 M892_24345 48c84820be4600a90f20d0220a0fff72 159 Gene3D G3DSA:1.20.1260.10 2 158 1.3E-53 T 12-10-2018 IPR012347 Ferritin-like M892_24085 fcf12dc932ee3fdfe09744a96c809c18 281 Gene3D G3DSA:3.90.226.10 14 214 1.3E-63 T 12-10-2018 M892_24085 fcf12dc932ee3fdfe09744a96c809c18 281 Pfam PF00378 Enoyl-CoA hydratase/isomerase 26 273 2.0E-47 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 M892_24085 fcf12dc932ee3fdfe09744a96c809c18 281 Gene3D G3DSA:1.10.12.10 217 280 9.1E-24 T 12-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal M892_24085 fcf12dc932ee3fdfe09744a96c809c18 281 SUPERFAMILY SSF52096 16 275 2.7E-72 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily M892_05215 8dde928d3dcb451a22aa1a2c2169e2dd 215 SUPERFAMILY SSF89155 8 212 1.83E-53 T 12-10-2018 IPR036411 TorD-like superfamily M892_05215 8dde928d3dcb451a22aa1a2c2169e2dd 215 Gene3D G3DSA:1.20.1280.20 129 214 2.8E-25 T 12-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 M892_05215 8dde928d3dcb451a22aa1a2c2169e2dd 215 Gene3D G3DSA:1.20.120.1820 3 126 1.3E-39 T 12-10-2018 M892_05215 8dde928d3dcb451a22aa1a2c2169e2dd 215 Pfam PF02613 Nitrate reductase delta subunit 50 182 4.8E-40 T 12-10-2018 IPR020945 DMSO/Nitrate reductase chaperone M892_05215 8dde928d3dcb451a22aa1a2c2169e2dd 215 Hamap MF_01150 Chaperone protein TorD [torD]. 3 212 35.052 T 12-10-2018 IPR023069 Chaperone TorD M892_04010 d25374913332024c56d84c69cc5d64e5 357 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 228 241 - T 12-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 M892_04010 d25374913332024c56d84c69cc5d64e5 357 Gene3D G3DSA:3.30.230.40 166 256 1.7E-36 T 12-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 M892_04010 d25374913332024c56d84c69cc5d64e5 357 Gene3D G3DSA:3.30.230.40 257 357 7.4E-37 T 12-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 M892_04010 d25374913332024c56d84c69cc5d64e5 357 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 6 151 9.7E-28 T 12-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 M892_04010 d25374913332024c56d84c69cc5d64e5 357 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 321 333 - T 12-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 M892_04010 d25374913332024c56d84c69cc5d64e5 357 SUPERFAMILY SSF54211 254 344 4.05E-31 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold M892_04010 d25374913332024c56d84c69cc5d64e5 357 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 169 357 37.897 T 12-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 M892_04010 d25374913332024c56d84c69cc5d64e5 357 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 6 147 2.2E-47 T 12-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 M892_04010 d25374913332024c56d84c69cc5d64e5 357 SUPERFAMILY SSF54211 169 253 1.06E-32 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold M892_04010 d25374913332024c56d84c69cc5d64e5 357 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 5 164 4.3E-79 T 12-10-2018 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15 M892_04010 d25374913332024c56d84c69cc5d64e5 357 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 4 357 51.142 T 12-10-2018 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15 M892_04010 d25374913332024c56d84c69cc5d64e5 357 Gene3D G3DSA:3.40.50.1000 1 165 2.2E-46 T 12-10-2018 IPR023214 HAD superfamily M892_04010 d25374913332024c56d84c69cc5d64e5 357 Pfam PF08645 Polynucleotide kinase 3 phosphatase 6 133 2.1E-5 T 12-10-2018 IPR013954 Polynucleotide kinase 3 phosphatase Reactome: R-HSA-5649702 M892_04010 d25374913332024c56d84c69cc5d64e5 357 SUPERFAMILY SSF56784 3 158 1.06E-38 T 12-10-2018 IPR036412 HAD-like superfamily M892_04010 d25374913332024c56d84c69cc5d64e5 357 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 198 339 8.8E-66 T 12-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 M892_00840 a0844c09ab8bb5ee9e44875733a33ad5 941 Pfam PF00012 Hsp70 protein 90 321 2.1E-16 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 M892_00840 a0844c09ab8bb5ee9e44875733a33ad5 941 SUPERFAMILY SSF53067 6 209 1.45E-29 T 12-10-2018 M892_00840 a0844c09ab8bb5ee9e44875733a33ad5 941 PRINTS PR00301 70kDa heat shock protein signature 165 185 3.6E-9 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 M892_00840 a0844c09ab8bb5ee9e44875733a33ad5 941 PRINTS PR00301 70kDa heat shock protein signature 6 19 3.6E-9 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 M892_00840 a0844c09ab8bb5ee9e44875733a33ad5 941 PRINTS PR00301 70kDa heat shock protein signature 232 242 3.6E-9 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 M892_00840 a0844c09ab8bb5ee9e44875733a33ad5 941 PRINTS PR00301 70kDa heat shock protein signature 404 424 3.6E-9 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 M892_00840 a0844c09ab8bb5ee9e44875733a33ad5 941 SUPERFAMILY SSF53067 223 462 1.54E-19 T 12-10-2018 M892_00840 a0844c09ab8bb5ee9e44875733a33ad5 941 Pfam PF12531 DNA-K related protein 691 938 3.4E-101 T 12-10-2018 IPR021030 Protein of unknown function DUF3731 M892_22645 baa1bb0b9c3ec89efa5e781dacc675d2 568 Gene3D G3DSA:3.40.190.10 122 323 7.6E-38 T 12-10-2018 M892_22645 baa1bb0b9c3ec89efa5e781dacc675d2 568 Pfam PF12793 Sugar transport-related sRNA regulator N-term 5 119 6.1E-37 T 12-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain M892_22645 baa1bb0b9c3ec89efa5e781dacc675d2 568 SUPERFAMILY SSF53850 117 559 3.26E-57 T 12-10-2018 M892_22645 baa1bb0b9c3ec89efa5e781dacc675d2 568 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 164 307 3.1E-18 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain M892_07570 3746bb59eddc222ea38918884b9fff25 422 SUPERFAMILY SSF55681 4 320 2.39E-103 T 12-10-2018 M892_07570 3746bb59eddc222ea38918884b9fff25 422 Gene3D G3DSA:3.40.50.800 326 421 5.6E-25 T 12-10-2018 IPR036621 Anticodon-binding domain superfamily M892_07570 3746bb59eddc222ea38918884b9fff25 422 Pfam PF13393 Histidyl-tRNA synthetase 10 312 3.5E-46 T 12-10-2018 M892_07570 3746bb59eddc222ea38918884b9fff25 422 Pfam PF03129 Anticodon binding domain 329 420 3.1E-11 T 12-10-2018 IPR004154 Anticodon-binding M892_07570 3746bb59eddc222ea38918884b9fff25 422 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 420 33.795 T 12-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 M892_07570 3746bb59eddc222ea38918884b9fff25 422 Gene3D G3DSA:3.30.930.10 2 323 1.3E-119 T 12-10-2018 M892_07570 3746bb59eddc222ea38918884b9fff25 422 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 409 3.8E-158 T 12-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 M892_07570 3746bb59eddc222ea38918884b9fff25 422 PIRSF PIRSF001549 2 422 4.8E-125 T 12-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 M892_07570 3746bb59eddc222ea38918884b9fff25 422 SUPERFAMILY SSF52954 327 421 9.49E-27 T 12-10-2018 M892_06880 65a07dbaa61bc853ae02371c2f123dbd 641 SUPERFAMILY SSF56601 256 619 1.29E-97 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like M892_06880 65a07dbaa61bc853ae02371c2f123dbd 641 Pfam PF03717 Penicillin-binding Protein dimerisation domain 66 241 4.3E-50 T 12-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 M892_06880 65a07dbaa61bc853ae02371c2f123dbd 641 Gene3D G3DSA:3.40.710.10 251 630 2.4E-94 T 12-10-2018 M892_06880 65a07dbaa61bc853ae02371c2f123dbd 641 Pfam PF00905 Penicillin binding protein transpeptidase domain 273 617 8.8E-78 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 M892_06880 65a07dbaa61bc853ae02371c2f123dbd 641 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 22 620 1.3E-238 T 12-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 M892_06880 65a07dbaa61bc853ae02371c2f123dbd 641 Gene3D G3DSA:3.30.1390.30 87 162 4.2E-52 T 12-10-2018 M892_06880 65a07dbaa61bc853ae02371c2f123dbd 641 Gene3D G3DSA:3.90.1310.10 66 250 4.2E-52 T 12-10-2018 M892_06880 65a07dbaa61bc853ae02371c2f123dbd 641 SUPERFAMILY SSF56519 58 254 2.09E-54 T 12-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 M892_06880 65a07dbaa61bc853ae02371c2f123dbd 641 Hamap MF_02081 Peptidoglycan D,D-transpeptidase MrdA [mrdA]. 5 624 53.335 T 12-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 M892_16455 59ba1ea0360390dd7243211b72dadd26 255 Pfam PF01026 TatD related DNase 3 253 4.4E-79 T 12-10-2018 IPR001130 TatD family GO:0016788 M892_16455 59ba1ea0360390dd7243211b72dadd26 255 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 12-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 M892_16455 59ba1ea0360390dd7243211b72dadd26 255 SUPERFAMILY SSF51556 1 253 3.6E-89 T 12-10-2018 IPR032466 Metal-dependent hydrolase M892_16455 59ba1ea0360390dd7243211b72dadd26 255 Gene3D G3DSA:3.20.20.140 1 255 5.7E-101 T 12-10-2018 M892_16455 59ba1ea0360390dd7243211b72dadd26 255 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 12-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 M892_16455 59ba1ea0360390dd7243211b72dadd26 255 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 125 135 - T 12-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 M892_16455 59ba1ea0360390dd7243211b72dadd26 255 PIRSF PIRSF005902 1 255 1.5E-82 T 12-10-2018 IPR001130 TatD family GO:0016788 M892_16455 59ba1ea0360390dd7243211b72dadd26 255 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 253 1.3E-94 T 12-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 M892_23030 0da002a36d1560dd710484bf3530bcf2 123 SUPERFAMILY SSF101756 20 122 1.96E-22 T 12-10-2018 IPR036700 Bacterial OB-fold superfamily M892_23030 0da002a36d1560dd710484bf3530bcf2 123 Gene3D G3DSA:2.40.50.200 17 123 1.3E-15 T 12-10-2018 IPR036700 Bacterial OB-fold superfamily M892_23030 0da002a36d1560dd710484bf3530bcf2 123 Pfam PF04076 Bacterial OB fold (BOF) protein 53 120 2.8E-9 T 12-10-2018 IPR005220 Bacterial OB-fold M892_18340 f82d05a0fbceae1534f4311d62654f75 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 6.3E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_18340 f82d05a0fbceae1534f4311d62654f75 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 6.3E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_18340 f82d05a0fbceae1534f4311d62654f75 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 6.3E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_18340 f82d05a0fbceae1534f4311d62654f75 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 1.0E-35 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_18340 f82d05a0fbceae1534f4311d62654f75 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 1.0E-35 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_18340 f82d05a0fbceae1534f4311d62654f75 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 1.0E-35 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_18340 f82d05a0fbceae1534f4311d62654f75 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.0E-35 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_18340 f82d05a0fbceae1534f4311d62654f75 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 1.0E-35 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_18340 f82d05a0fbceae1534f4311d62654f75 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 1.0E-35 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_18340 f82d05a0fbceae1534f4311d62654f75 243 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 M892_18340 f82d05a0fbceae1534f4311d62654f75 243 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 174 0.0015 T 12-10-2018 M892_18340 f82d05a0fbceae1534f4311d62654f75 243 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 242 2.4E-60 T 12-10-2018 M892_18340 f82d05a0fbceae1534f4311d62654f75 243 Gene3D G3DSA:3.40.50.720 1 243 2.3E-77 T 12-10-2018 M892_18340 f82d05a0fbceae1534f4311d62654f75 243 SUPERFAMILY SSF51735 3 242 1.67E-76 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_07095 cd005adc565db92180fa95d2d880bb20 155 Pfam PF01029 NusB family 11 149 2.7E-35 T 12-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 M892_07095 cd005adc565db92180fa95d2d880bb20 155 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 8 153 23.065 T 12-10-2018 IPR011605 NusB antitermination factor GO:0006353 M892_07095 cd005adc565db92180fa95d2d880bb20 155 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 10 150 8.9E-43 T 12-10-2018 IPR011605 NusB antitermination factor GO:0006353 M892_07095 cd005adc565db92180fa95d2d880bb20 155 Gene3D G3DSA:1.10.940.10 3 155 8.1E-48 T 12-10-2018 IPR035926 NusB-like superfamily M892_07095 cd005adc565db92180fa95d2d880bb20 155 SUPERFAMILY SSF48013 7 153 3.53E-39 T 12-10-2018 IPR035926 NusB-like superfamily M892_12955 ee33eb02ba1c7e6ba44c22710b9cb3a6 153 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 7 97 1.7E-30 T 12-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal M892_12955 ee33eb02ba1c7e6ba44c22710b9cb3a6 153 SUPERFAMILY SSF54893 2 100 7.72E-36 T 12-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily M892_12955 ee33eb02ba1c7e6ba44c22710b9cb3a6 153 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 102 149 6.5E-19 T 12-10-2018 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal M892_12955 ee33eb02ba1c7e6ba44c22710b9cb3a6 153 SUPERFAMILY SSF57825 101 151 3.4E-16 T 12-10-2018 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily M892_12955 ee33eb02ba1c7e6ba44c22710b9cb3a6 153 Gene3D G3DSA:3.30.70.140 1 100 1.0E-36 T 12-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily M892_12955 ee33eb02ba1c7e6ba44c22710b9cb3a6 153 Gene3D G3DSA:2.30.30.20 101 153 4.0E-24 T 12-10-2018 M892_12955 ee33eb02ba1c7e6ba44c22710b9cb3a6 153 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 9 99 1.0E-46 T 12-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal M892_12955 ee33eb02ba1c7e6ba44c22710b9cb3a6 153 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 5 150 6.1E-61 T 12-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 M892_12955 ee33eb02ba1c7e6ba44c22710b9cb3a6 153 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 4 152 33.876 T 12-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 M892_07620 e9ed2e53da731d35917524ed01cd0f1b 171 Gene3D G3DSA:1.20.1280.20 80 171 3.0E-28 T 12-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 M892_07620 e9ed2e53da731d35917524ed01cd0f1b 171 SMART SM00271 1 66 2.9E-9 T 12-10-2018 IPR001623 DnaJ domain M892_07620 e9ed2e53da731d35917524ed01cd0f1b 171 SUPERFAMILY SSF47144 78 170 2.62E-25 T 12-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 M892_07620 e9ed2e53da731d35917524ed01cd0f1b 171 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 1 170 25.341 T 12-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 M892_07620 e9ed2e53da731d35917524ed01cd0f1b 171 Pfam PF00226 DnaJ domain 2 70 4.0E-7 T 12-10-2018 IPR001623 DnaJ domain M892_07620 e9ed2e53da731d35917524ed01cd0f1b 171 Gene3D G3DSA:1.10.287.110 1 79 1.2E-22 T 12-10-2018 IPR036869 Chaperone J-domain superfamily M892_07620 e9ed2e53da731d35917524ed01cd0f1b 171 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 13 169 1.3E-40 T 12-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 M892_07620 e9ed2e53da731d35917524ed01cd0f1b 171 SUPERFAMILY SSF46565 1 72 6.54E-17 T 12-10-2018 IPR036869 Chaperone J-domain superfamily M892_07620 e9ed2e53da731d35917524ed01cd0f1b 171 Pfam PF07743 HSCB C-terminal oligomerisation domain 87 163 1.7E-19 T 12-10-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 M892_19110 e767f1aa4588039fb0595a2168ecdcb4 716 Pfam PF13807 G-rich domain on putative tyrosine kinase 368 449 3.9E-34 T 12-10-2018 IPR032807 Tyrosine kinase, G-rich domain M892_19110 e767f1aa4588039fb0595a2168ecdcb4 716 Pfam PF13614 AAA domain 536 648 7.8E-11 T 12-10-2018 IPR025669 AAA domain M892_19110 e767f1aa4588039fb0595a2168ecdcb4 716 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 506 709 1.8E-49 T 12-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 M892_19110 e767f1aa4588039fb0595a2168ecdcb4 716 SUPERFAMILY SSF52540 524 699 1.77E-33 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_19110 e767f1aa4588039fb0595a2168ecdcb4 716 Gene3D G3DSA:3.40.50.300 441 716 8.6E-76 T 12-10-2018 M892_19110 e767f1aa4588039fb0595a2168ecdcb4 716 Pfam PF02706 Chain length determinant protein 14 106 7.2E-21 T 12-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 M892_03765 00dd3beefd08737efe0a7589fb4cb937 523 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 33 520 1.3E-172 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 M892_03765 00dd3beefd08737efe0a7589fb4cb937 523 ProSitePatterns PS01303 BCCT family of transporters signature. 336 345 - T 12-10-2018 IPR018093 BCCT transporter, conserved site M892_03765 00dd3beefd08737efe0a7589fb4cb937 523 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 73 520 1.5E-135 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 M892_21620 56a33fa92bf480c9f24295e27d38fd43 390 Pfam PF13005 zinc-finger binding domain of transposase IS66 17 40 9.4E-7 T 12-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 M892_21620 56a33fa92bf480c9f24295e27d38fd43 390 Pfam PF13817 IS66 C-terminal element 350 386 5.3E-8 T 12-10-2018 IPR039552 Transposase IS66, C-terminal M892_21620 56a33fa92bf480c9f24295e27d38fd43 390 Pfam PF03050 Transposase IS66 family 60 343 1.3E-101 T 12-10-2018 IPR004291 Transposase, IS66 M892_09505 36e672b7a21614b8b1eb83c3e9bdca9b 330 SUPERFAMILY SSF55729 146 303 4.61E-23 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_09505 36e672b7a21614b8b1eb83c3e9bdca9b 330 Pfam PF13480 Acetyltransferase (GNAT) domain 145 271 5.9E-8 T 12-10-2018 IPR038740 BioF2-like, acetyltransferase domain KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 M892_09505 36e672b7a21614b8b1eb83c3e9bdca9b 330 Gene3D G3DSA:3.40.630.30 130 288 1.8E-18 T 12-10-2018 M892_14920 eb2a4d5844dddf7a6f835de3a6aac93d 401 Gene3D G3DSA:3.40.50.720 1 150 1.7E-51 T 12-10-2018 M892_14920 eb2a4d5844dddf7a6f835de3a6aac93d 401 PIRSF PIRSF006205 1 401 1.2E-150 T 12-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 M892_14920 eb2a4d5844dddf7a6f835de3a6aac93d 401 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 396 45.45 T 12-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 M892_14920 eb2a4d5844dddf7a6f835de3a6aac93d 401 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 2 395 2.6E-159 T 12-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 M892_14920 eb2a4d5844dddf7a6f835de3a6aac93d 401 SUPERFAMILY SSF69055 302 398 3.4E-30 T 12-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 M892_14920 eb2a4d5844dddf7a6f835de3a6aac93d 401 SUPERFAMILY SSF51735 2 150 5.37E-46 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_14920 eb2a4d5844dddf7a6f835de3a6aac93d 401 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 2.0E-44 T 12-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 M892_14920 eb2a4d5844dddf7a6f835de3a6aac93d 401 Gene3D G3DSA:1.10.1740.10 312 400 3.5E-28 T 12-10-2018 M892_14920 eb2a4d5844dddf7a6f835de3a6aac93d 401 Pfam PF13288 DXP reductoisomerase C-terminal domain 271 391 4.0E-39 T 12-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 M892_14920 eb2a4d5844dddf7a6f835de3a6aac93d 401 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 239 2.3E-37 T 12-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 M892_14920 eb2a4d5844dddf7a6f835de3a6aac93d 401 SUPERFAMILY SSF55347 126 274 2.32E-62 T 12-10-2018 M892_18735 746419087c96f68615b593072aeff05a 390 Gene3D G3DSA:1.25.40.10 129 275 1.7E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_18735 746419087c96f68615b593072aeff05a 390 Gene3D G3DSA:1.25.40.10 276 390 4.6E-8 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_18735 746419087c96f68615b593072aeff05a 390 SUPERFAMILY SSF48452 244 368 2.94E-9 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_18735 746419087c96f68615b593072aeff05a 390 SUPERFAMILY SSF48452 29 232 3.5E-11 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_18735 746419087c96f68615b593072aeff05a 390 Gene3D G3DSA:1.25.40.10 15 128 1.1E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_15760 7f036c82ad977823749675d33c2f1271 315 Pfam PF04187 Haem-binding uptake, Tiki superfamily, ChaN 56 255 4.5E-60 T 12-10-2018 IPR007314 Haem-binding uptake, Tiki superfamily, ChaN M892_15760 7f036c82ad977823749675d33c2f1271 315 SUPERFAMILY SSF159501 33 283 2.04E-76 T 12-10-2018 M892_15760 7f036c82ad977823749675d33c2f1271 315 PIRSF PIRSF020419 3 299 2.6E-77 T 12-10-2018 IPR016773 Ferric uptake regulator, CjrA, predicted M892_15760 7f036c82ad977823749675d33c2f1271 315 Gene3D G3DSA:1.10.8.760 155 219 1.8E-29 T 12-10-2018 M892_15760 7f036c82ad977823749675d33c2f1271 315 Gene3D G3DSA:3.40.50.11550 44 269 1.8E-29 T 12-10-2018 M892_07275 fd4e3294251715399275505c08fc78c8 424 Pfam PF00375 Sodium:dicarboxylate symporter family 6 404 1.1E-113 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 M892_07275 fd4e3294251715399275505c08fc78c8 424 SUPERFAMILY SSF118215 5 406 1.96E-104 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 M892_07275 fd4e3294251715399275505c08fc78c8 424 Gene3D G3DSA:1.10.3860.10 1 422 1.6E-113 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 M892_07275 fd4e3294251715399275505c08fc78c8 424 PRINTS PR00173 Glutamate-aspartate symporter signature 230 249 4.1E-40 T 12-10-2018 M892_07275 fd4e3294251715399275505c08fc78c8 424 PRINTS PR00173 Glutamate-aspartate symporter signature 297 323 4.1E-40 T 12-10-2018 M892_07275 fd4e3294251715399275505c08fc78c8 424 PRINTS PR00173 Glutamate-aspartate symporter signature 195 214 4.1E-40 T 12-10-2018 M892_07275 fd4e3294251715399275505c08fc78c8 424 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 4.1E-40 T 12-10-2018 M892_07275 fd4e3294251715399275505c08fc78c8 424 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 4.1E-40 T 12-10-2018 M892_07275 fd4e3294251715399275505c08fc78c8 424 PRINTS PR00173 Glutamate-aspartate symporter signature 148 170 4.1E-40 T 12-10-2018 M892_07275 fd4e3294251715399275505c08fc78c8 424 PRINTS PR00173 Glutamate-aspartate symporter signature 359 379 4.1E-40 T 12-10-2018 M892_07275 fd4e3294251715399275505c08fc78c8 424 PRINTS PR00173 Glutamate-aspartate symporter signature 332 351 4.1E-40 T 12-10-2018 M892_07275 fd4e3294251715399275505c08fc78c8 424 PRINTS PR00173 Glutamate-aspartate symporter signature 3 23 4.1E-40 T 12-10-2018 M892_11375 5aa5c4666adcbfd85d23b73915992efb 369 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 301 330 - T 12-10-2018 IPR030390 RNA methyltransferase TrmA, active site M892_11375 5aa5c4666adcbfd85d23b73915992efb 369 Gene3D G3DSA:3.40.50.150 13 364 8.5E-140 T 12-10-2018 M892_11375 5aa5c4666adcbfd85d23b73915992efb 369 SUPERFAMILY SSF53335 10 367 2.81E-55 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M892_11375 5aa5c4666adcbfd85d23b73915992efb 369 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 11 368 1.6E-187 T 12-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 M892_11375 5aa5c4666adcbfd85d23b73915992efb 369 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 350 360 - T 12-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site M892_11375 5aa5c4666adcbfd85d23b73915992efb 369 Gene3D G3DSA:3.40.1350.30 45 189 8.5E-140 T 12-10-2018 M892_11375 5aa5c4666adcbfd85d23b73915992efb 369 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 4 368 44.871 T 12-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 M892_11375 5aa5c4666adcbfd85d23b73915992efb 369 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 10 368 2.8E-191 T 12-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 M892_19395 e06186cdbed560254b9ca881977a1736 917 SUPERFAMILY SSF48208 329 903 2.15E-28 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 M892_19395 e06186cdbed560254b9ca881977a1736 917 Pfam PF07971 Glycosyl hydrolase family 92 302 907 4.1E-141 T 12-10-2018 IPR012939 Glycosyl hydrolase family 92 M892_19395 e06186cdbed560254b9ca881977a1736 917 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 23 611 4.9E-86 T 12-10-2018 IPR005887 Alpha-1,2-mannosidase, putative M892_18790 9eb0b13eea00688ef04be96f303ebe35 291 Gene3D G3DSA:1.10.3470.10 77 288 1.8E-9 T 12-10-2018 IPR037294 ABC transporter, BtuC-like M892_18790 9eb0b13eea00688ef04be96f303ebe35 291 SUPERFAMILY SSF81345 15 281 1.57E-34 T 12-10-2018 IPR037294 ABC transporter, BtuC-like M892_18790 9eb0b13eea00688ef04be96f303ebe35 291 Pfam PF00950 ABC 3 transport family 23 285 2.9E-55 T 12-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 M892_03810 73e506d40b6dc67d00f843a1d475d950 129 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 3 129 1.6E-48 T 12-10-2018 IPR014320 Phage shock protein, PspC M892_03810 73e506d40b6dc67d00f843a1d475d950 129 Pfam PF04024 PspC domain 4 62 3.7E-15 T 12-10-2018 IPR007168 Phage shock protein, PspC, N-terminal M892_12455 545c883b0ae7540d400ba9b6dcf2c9be 855 Gene3D G3DSA:3.40.710.10 243 332 7.6E-9 T 12-10-2018 M892_12455 545c883b0ae7540d400ba9b6dcf2c9be 855 Pfam PF00912 Transglycosylase 55 229 3.9E-63 T 12-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 M892_12455 545c883b0ae7540d400ba9b6dcf2c9be 855 SUPERFAMILY SSF56601 211 837 5.82E-112 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like M892_12455 545c883b0ae7540d400ba9b6dcf2c9be 855 Pfam PF00905 Penicillin binding protein transpeptidase domain 438 615 4.7E-21 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 M892_12455 545c883b0ae7540d400ba9b6dcf2c9be 855 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 65 787 1.4E-166 T 12-10-2018 M892_12455 545c883b0ae7540d400ba9b6dcf2c9be 855 SUPERFAMILY SSF53955 43 256 4.5E-78 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily M892_12455 545c883b0ae7540d400ba9b6dcf2c9be 855 Gene3D G3DSA:1.10.3810.10 48 242 2.7E-78 T 12-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 M892_12455 545c883b0ae7540d400ba9b6dcf2c9be 855 Pfam PF17092 Penicillin-binding protein OB-like domain 317 434 7.3E-32 T 12-10-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 M892_17245 21ce9c57ab45234a09073252c5a525cc 62 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 4 27 7.7E-4 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal M892_17245 21ce9c57ab45234a09073252c5a525cc 62 SUPERFAMILY SSF46548 39 61 1.05E-5 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 M892_19570 12abe34a70216c559c343478c3ec7802 340 SUPERFAMILY SSF52540 4 338 3.72E-104 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_19570 12abe34a70216c559c343478c3ec7802 340 Gene3D G3DSA:3.40.50.720 57 133 5.9E-19 T 12-10-2018 M892_19570 12abe34a70216c559c343478c3ec7802 340 PIRSF PIRSF026760 9 340 5.3E-106 T 12-10-2018 IPR011669 Uncharacterised conserved protein UCP026760 M892_19570 12abe34a70216c559c343478c3ec7802 340 Pfam PF17396 Domain of unknown function (DUF1611_N) Rossmann-like domain 53 130 2.9E-22 T 12-10-2018 IPR035402 Domain of unknown function DUF1611-N, Rossmann-like domain M892_19570 12abe34a70216c559c343478c3ec7802 340 Gene3D G3DSA:3.40.50.300 134 339 1.2E-75 T 12-10-2018 M892_19570 12abe34a70216c559c343478c3ec7802 340 Pfam PF07755 Domain of unknown function (DUF1611_C) P-loop domain 137 333 7.9E-74 T 12-10-2018 IPR035086 Domain of unknown function DUF1611, P-loop M892_08345 ae285fe2609493a180de68393a4d942f 909 SUPERFAMILY SSF81886 620 897 6.41E-84 T 12-10-2018 IPR036266 SecA, Wing/Scaffold superfamily M892_08345 ae285fe2609493a180de68393a4d942f 909 SMART SM00957 6 403 0.0 T 12-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 M892_08345 ae285fe2609493a180de68393a4d942f 909 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 816 0.0 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 M892_08345 ae285fe2609493a180de68393a4d942f 909 Gene3D G3DSA:3.40.50.300 22 416 2.3E-176 T 12-10-2018 M892_08345 ae285fe2609493a180de68393a4d942f 909 Gene3D G3DSA:1.10.3060.10 621 833 4.1E-76 T 12-10-2018 M892_08345 ae285fe2609493a180de68393a4d942f 909 Gene3D G3DSA:3.90.1440.10 229 369 2.3E-176 T 12-10-2018 M892_08345 ae285fe2609493a180de68393a4d942f 909 SUPERFAMILY SSF81767 227 369 1.57E-42 T 12-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 M892_08345 ae285fe2609493a180de68393a4d942f 909 Pfam PF07517 SecA DEAD-like domain 7 403 3.0E-133 T 12-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 M892_08345 ae285fe2609493a180de68393a4d942f 909 SUPERFAMILY SSF52540 5 416 3.67E-85 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_08345 ae285fe2609493a180de68393a4d942f 909 PRINTS PR00906 SecA protein signature 117 127 3.2E-72 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 M892_08345 ae285fe2609493a180de68393a4d942f 909 PRINTS PR00906 SecA protein signature 340 362 3.2E-72 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 M892_08345 ae285fe2609493a180de68393a4d942f 909 PRINTS PR00906 SecA protein signature 414 427 3.2E-72 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 M892_08345 ae285fe2609493a180de68393a4d942f 909 PRINTS PR00906 SecA protein signature 63 87 3.2E-72 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 M892_08345 ae285fe2609493a180de68393a4d942f 909 PRINTS PR00906 SecA protein signature 170 190 3.2E-72 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 M892_08345 ae285fe2609493a180de68393a4d942f 909 PRINTS PR00906 SecA protein signature 377 394 3.2E-72 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 M892_08345 ae285fe2609493a180de68393a4d942f 909 PRINTS PR00906 SecA protein signature 101 115 3.2E-72 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 M892_08345 ae285fe2609493a180de68393a4d942f 909 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 20.028 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 M892_08345 ae285fe2609493a180de68393a4d942f 909 Pfam PF02810 SEC-C motif 889 907 3.3E-10 T 12-10-2018 IPR004027 SEC-C motif M892_08345 ae285fe2609493a180de68393a4d942f 909 SUPERFAMILY SSF52540 418 610 4.56E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_08345 ae285fe2609493a180de68393a4d942f 909 Pfam PF07516 SecA Wing and Scaffold domain 617 829 1.3E-66 T 12-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 M892_08345 ae285fe2609493a180de68393a4d942f 909 Gene3D G3DSA:3.40.50.300 418 620 2.4E-87 T 12-10-2018 M892_08345 ae285fe2609493a180de68393a4d942f 909 ProSitePatterns PS01312 SecA family signature. 501 516 - T 12-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 M892_08345 ae285fe2609493a180de68393a4d942f 909 Pfam PF01043 SecA preprotein cross-linking domain 232 359 2.0E-38 T 12-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 M892_08345 ae285fe2609493a180de68393a4d942f 909 SMART SM00958 228 359 6.3E-81 T 12-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 M892_06940 728993c6a87bdd1dc4991b40debffa67 315 Gene3D G3DSA:1.10.260.40 2 60 1.7E-21 T 12-10-2018 M892_06940 728993c6a87bdd1dc4991b40debffa67 315 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 12-10-2018 M892_06940 728993c6a87bdd1dc4991b40debffa67 315 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 1.3E-19 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M892_06940 728993c6a87bdd1dc4991b40debffa67 315 SMART SM00354 4 74 8.4E-32 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M892_06940 728993c6a87bdd1dc4991b40debffa67 315 SUPERFAMILY SSF47413 3 60 1.13E-16 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 M892_06940 728993c6a87bdd1dc4991b40debffa67 315 Gene3D G3DSA:3.40.50.2300 68 303 7.9E-64 T 12-10-2018 M892_06940 728993c6a87bdd1dc4991b40debffa67 315 Pfam PF13377 Periplasmic binding protein-like domain 168 308 5.3E-16 T 12-10-2018 M892_06940 728993c6a87bdd1dc4991b40debffa67 315 Gene3D G3DSA:3.40.50.2300 163 279 7.9E-64 T 12-10-2018 M892_06940 728993c6a87bdd1dc4991b40debffa67 315 SUPERFAMILY SSF53822 63 306 2.16E-57 T 12-10-2018 IPR028082 Periplasmic binding protein-like I M892_06940 728993c6a87bdd1dc4991b40debffa67 315 TIGRFAM TIGR02405 trehalos_R_Ecol: trehalose operon repressor 4 310 3.1E-137 T 12-10-2018 IPR012771 Trehalose operon repressor GO:0003677|GO:0005991|GO:0045892 M892_16620 0f0bcbaf803983670470fdc1b0cfa77e 230 PIRSF PIRSF037290 1 229 3.4E-75 T 12-10-2018 IPR017166 Uncharacterised conserved protein UCP037290 M892_16620 0f0bcbaf803983670470fdc1b0cfa77e 230 SUPERFAMILY SSF52540 48 159 1.38E-26 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_16620 0f0bcbaf803983670470fdc1b0cfa77e 230 Pfam PF00154 recA bacterial DNA recombination protein 29 125 3.5E-5 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 M892_16620 0f0bcbaf803983670470fdc1b0cfa77e 230 Gene3D G3DSA:3.40.50.300 52 158 1.6E-27 T 12-10-2018 M892_15345 982590d70d51554540f2af9d3fc13cdd 130 SMART SM00448 9 123 1.6E-35 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_15345 982590d70d51554540f2af9d3fc13cdd 130 Gene3D G3DSA:3.40.50.2300 1 130 4.5E-41 T 12-10-2018 M892_15345 982590d70d51554540f2af9d3fc13cdd 130 Pfam PF00072 Response regulator receiver domain 11 123 2.5E-32 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_15345 982590d70d51554540f2af9d3fc13cdd 130 SUPERFAMILY SSF52172 7 128 3.13E-38 T 12-10-2018 IPR011006 CheY-like superfamily M892_27415 b70920e5522590a843af942ecdc00d8c 478 Gene3D G3DSA:3.20.20.300 1 253 1.6E-67 T 12-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 M892_27415 b70920e5522590a843af942ecdc00d8c 478 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 269 477 5.1E-12 T 12-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 M892_27415 b70920e5522590a843af942ecdc00d8c 478 SUPERFAMILY SSF52279 269 477 2.09E-18 T 12-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 M892_27415 b70920e5522590a843af942ecdc00d8c 478 Gene3D G3DSA:3.40.50.1700 254 478 7.4E-20 T 12-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 M892_27415 b70920e5522590a843af942ecdc00d8c 478 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 2 229 5.1E-32 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 M892_27415 b70920e5522590a843af942ecdc00d8c 478 SUPERFAMILY SSF51445 2 268 1.47E-55 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily M892_24165 9274375f9482d0802477a7f6cf428c4d 808 Gene3D G3DSA:2.40.40.20 643 800 8.6E-40 T 12-10-2018 M892_24165 9274375f9482d0802477a7f6cf428c4d 808 SUPERFAMILY SSF53706 48 653 1.57E-136 T 12-10-2018 M892_24165 9274375f9482d0802477a7f6cf428c4d 808 Pfam PF01568 Molydopterin dinucleotide binding domain 668 783 3.6E-21 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 M892_24165 9274375f9482d0802477a7f6cf428c4d 808 Gene3D G3DSA:3.40.50.740 86 560 2.1E-217 T 12-10-2018 M892_24165 9274375f9482d0802477a7f6cf428c4d 808 Gene3D G3DSA:3.40.228.10 174 635 2.1E-217 T 12-10-2018 M892_24165 9274375f9482d0802477a7f6cf428c4d 808 Pfam PF00384 Molybdopterin oxidoreductase 86 549 2.7E-67 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M892_24165 9274375f9482d0802477a7f6cf428c4d 808 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 494 511 - T 12-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 M892_24165 9274375f9482d0802477a7f6cf428c4d 808 SUPERFAMILY SSF50692 667 804 3.16E-34 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily M892_24165 9274375f9482d0802477a7f6cf428c4d 808 Gene3D G3DSA:3.90.55.10 81 609 2.1E-217 T 12-10-2018 M892_21165 2270c5119f69abefb524c3662c0b9a8c 323 Gene3D G3DSA:1.10.760.10 50 178 3.9E-84 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M892_21165 2270c5119f69abefb524c3662c0b9a8c 323 Pfam PF03150 Di-haem cytochrome c peroxidase 49 192 2.9E-36 T 12-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 M892_21165 2270c5119f69abefb524c3662c0b9a8c 323 SUPERFAMILY SSF46626 179 316 1.51E-29 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M892_21165 2270c5119f69abefb524c3662c0b9a8c 323 Gene3D G3DSA:1.10.760.10 179 311 3.9E-84 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M892_21165 2270c5119f69abefb524c3662c0b9a8c 323 SUPERFAMILY SSF46626 37 180 2.15E-35 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M892_21165 2270c5119f69abefb524c3662c0b9a8c 323 PIRSF PIRSF000294 2 318 2.3E-75 T 12-10-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 M892_21165 2270c5119f69abefb524c3662c0b9a8c 323 Pfam PF00034 Cytochrome c 202 309 2.8E-4 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_01890 14183da2605fba28c7eebf133db7c410 315 SUPERFAMILY SSF52402 4 158 1.26E-25 T 12-10-2018 M892_01890 14183da2605fba28c7eebf133db7c410 315 SUPERFAMILY SSF52402 158 308 2.3E-23 T 12-10-2018 M892_01890 14183da2605fba28c7eebf133db7c410 315 Pfam PF00582 Universal stress protein family 4 148 4.1E-14 T 12-10-2018 IPR006016 UspA M892_01890 14183da2605fba28c7eebf133db7c410 315 Pfam PF00582 Universal stress protein family 178 301 1.0E-14 T 12-10-2018 IPR006016 UspA M892_01890 14183da2605fba28c7eebf133db7c410 315 Gene3D G3DSA:3.40.50.12370 1 313 2.8E-112 T 12-10-2018 M892_26145 c86c9706ef5468c855d7278a278c0c88 208 Gene3D G3DSA:2.10.109.10 92 208 4.9E-27 T 12-10-2018 M892_26145 c86c9706ef5468c855d7278a278c0c88 208 Pfam PF07022 Bacteriophage CI repressor helix-turn-helix domain 18 81 1.7E-18 T 12-10-2018 IPR010744 Bacteriophage CI repressor GO:0003677|GO:0045892 M892_26145 c86c9706ef5468c855d7278a278c0c88 208 Pfam PF16452 Bacteriophage CI repressor C-terminal domain 103 202 2.1E-20 T 12-10-2018 IPR032499 Bacteriophage CI repressor, C-terminal GO:0051259 M892_26145 c86c9706ef5468c855d7278a278c0c88 208 Gene3D G3DSA:1.10.260.40 15 84 8.5E-19 T 12-10-2018 M892_15575 38133d60b8e99c265e915e579dde3795 504 Pfam PF13522 Glutamine amidotransferase domain 63 207 1.4E-17 T 12-10-2018 M892_15575 38133d60b8e99c265e915e579dde3795 504 SUPERFAMILY SSF53271 249 482 4.33E-69 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like M892_15575 38133d60b8e99c265e915e579dde3795 504 SUPERFAMILY SSF56235 2 256 4.12E-71 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal M892_15575 38133d60b8e99c265e915e579dde3795 504 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 463 9.6E-166 T 12-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 M892_15575 38133d60b8e99c265e915e579dde3795 504 Gene3D G3DSA:3.40.50.2020 276 440 7.0E-157 T 12-10-2018 M892_15575 38133d60b8e99c265e915e579dde3795 504 PIRSF PIRSF000485 1 479 9.3E-168 T 12-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 M892_15575 38133d60b8e99c265e915e579dde3795 504 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 463 44.738 T 12-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 M892_15575 38133d60b8e99c265e915e579dde3795 504 Gene3D G3DSA:3.60.20.10 2 411 7.0E-157 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal M892_16565 cf4e21eb61e16e5789b1d7784a75a079 306 Pfam PF13737 Transposase DDE domain 19 129 1.1E-44 T 12-10-2018 IPR025668 Transposase DDE domain M892_02555 cf4e21eb61e16e5789b1d7784a75a079 306 Pfam PF13737 Transposase DDE domain 19 129 1.1E-44 T 12-10-2018 IPR025668 Transposase DDE domain M892_04785 cf4e21eb61e16e5789b1d7784a75a079 306 Pfam PF13737 Transposase DDE domain 19 129 1.1E-44 T 12-10-2018 IPR025668 Transposase DDE domain M892_07320 4a16c1bcacc7cafe52fc54d972d4ccdc 147 Gene3D G3DSA:3.30.530.20 1 143 6.9E-37 T 12-10-2018 IPR023393 START-like domain superfamily M892_07320 4a16c1bcacc7cafe52fc54d972d4ccdc 147 SUPERFAMILY SSF55961 1 143 2.75E-33 T 12-10-2018 M892_07320 4a16c1bcacc7cafe52fc54d972d4ccdc 147 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 135 9.3E-31 T 12-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 M892_09330 91a1cb3af2e2f5fc49b6a9c050c8fff9 472 Gene3D G3DSA:3.40.120.10 176 256 3.9E-32 T 12-10-2018 M892_09330 91a1cb3af2e2f5fc49b6a9c050c8fff9 472 SUPERFAMILY SSF53738 158 258 1.96E-14 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M892_09330 91a1cb3af2e2f5fc49b6a9c050c8fff9 472 Gene3D G3DSA:3.40.120.10 257 374 3.4E-37 T 12-10-2018 M892_09330 91a1cb3af2e2f5fc49b6a9c050c8fff9 472 SUPERFAMILY SSF53738 9 167 2.86E-29 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M892_09330 91a1cb3af2e2f5fc49b6a9c050c8fff9 472 Gene3D G3DSA:3.30.310.50 375 472 4.1E-26 T 12-10-2018 M892_09330 91a1cb3af2e2f5fc49b6a9c050c8fff9 472 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 415 466 4.9E-6 T 12-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M892_09330 91a1cb3af2e2f5fc49b6a9c050c8fff9 472 Gene3D G3DSA:3.40.120.10 5 154 2.6E-39 T 12-10-2018 M892_09330 91a1cb3af2e2f5fc49b6a9c050c8fff9 472 SUPERFAMILY SSF55957 413 471 3.01E-12 T 12-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M892_09330 91a1cb3af2e2f5fc49b6a9c050c8fff9 472 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 159 256 6.8E-11 T 12-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M892_09330 91a1cb3af2e2f5fc49b6a9c050c8fff9 472 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 261 377 3.7E-8 T 12-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M892_09330 91a1cb3af2e2f5fc49b6a9c050c8fff9 472 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 13 137 7.3E-26 T 12-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M892_09330 91a1cb3af2e2f5fc49b6a9c050c8fff9 472 SUPERFAMILY SSF53738 244 365 3.35E-5 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M892_07925 6d95aadbf1e52856889611189715e0bc 555 Pfam PF00005 ABC transporter 22 191 2.0E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_07925 6d95aadbf1e52856889611189715e0bc 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 3 553 4.7E-293 T 12-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 M892_07925 6d95aadbf1e52856889611189715e0bc 555 SMART SM00382 348 518 1.0E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_07925 6d95aadbf1e52856889611189715e0bc 555 SMART SM00382 31 236 7.3E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_07925 6d95aadbf1e52856889611189715e0bc 555 Gene3D G3DSA:3.40.50.300 1 285 1.1E-85 T 12-10-2018 M892_07925 6d95aadbf1e52856889611189715e0bc 555 SUPERFAMILY SSF52540 303 527 1.14E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_07925 6d95aadbf1e52856889611189715e0bc 555 Pfam PF12848 ABC transporter 230 306 2.7E-13 T 12-10-2018 IPR032781 ABC-transporter extension domain M892_07925 6d95aadbf1e52856889611189715e0bc 555 Pfam PF00005 ABC transporter 340 473 6.7E-25 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_07925 6d95aadbf1e52856889611189715e0bc 555 Gene3D G3DSA:3.40.50.300 286 555 7.2E-77 T 12-10-2018 M892_07925 6d95aadbf1e52856889611189715e0bc 555 SUPERFAMILY SSF52540 9 242 2.03E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_07925 6d95aadbf1e52856889611189715e0bc 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_05625 2aeec1d91c8c7dbf4cd81694308942cd 120 Gene3D G3DSA:3.40.30.10 1 109 1.3E-40 T 12-10-2018 M892_05625 2aeec1d91c8c7dbf4cd81694308942cd 120 Pfam PF06953 Arsenical resistance operon trans-acting repressor ArsD 1 120 2.5E-44 T 12-10-2018 IPR010712 Arsenical-resistance operon trans-acting repressor ArsD GO:0003677|GO:0045892|GO:0046685 M892_15530 986472ae49a1857f3a37c1217c23c8c4 383 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 116 263 1.3E-34 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 M892_15530 986472ae49a1857f3a37c1217c23c8c4 383 SUPERFAMILY SSF51735 99 263 3.8E-35 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_15530 986472ae49a1857f3a37c1217c23c8c4 383 SUPERFAMILY SSF52283 7 115 1.3E-22 T 12-10-2018 M892_15530 986472ae49a1857f3a37c1217c23c8c4 383 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 13 291 1.9E-23 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 M892_15530 986472ae49a1857f3a37c1217c23c8c4 383 Gene3D G3DSA:3.40.50.720 7 285 9.1E-113 T 12-10-2018 M892_15530 986472ae49a1857f3a37c1217c23c8c4 383 Gene3D G3DSA:3.30.1370.170 300 383 3.6E-31 T 12-10-2018 IPR038251 PdxB, dimerisation domain superfamily KEGG: 00750+1.1.1.290 M892_15530 986472ae49a1857f3a37c1217c23c8c4 383 Pfam PF11890 Domain of unknown function (DUF3410) 296 376 2.7E-27 T 12-10-2018 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00750+1.1.1.290 M892_15530 986472ae49a1857f3a37c1217c23c8c4 383 Gene3D G3DSA:3.40.50.720 99 264 9.1E-113 T 12-10-2018 M892_15530 986472ae49a1857f3a37c1217c23c8c4 383 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 7 364 45.118 T 12-10-2018 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00750+1.1.1.290 M892_15530 986472ae49a1857f3a37c1217c23c8c4 383 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 204 220 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site M892_05535 a6dff5350fd5fc046fa7ad401b59874c 252 SUPERFAMILY SSF53167 4 251 3.93E-72 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 M892_05535 a6dff5350fd5fc046fa7ad401b59874c 252 Gene3D G3DSA:3.40.50.1580 1 252 5.5E-81 T 12-10-2018 M892_05535 a6dff5350fd5fc046fa7ad401b59874c 252 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 65 80 - T 12-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 M892_05535 a6dff5350fd5fc046fa7ad401b59874c 252 TIGRFAM TIGR01718 Uridine-psphlse: uridine phosphorylase 5 251 7.6E-111 T 12-10-2018 IPR010058 Uridine phosphorylase GO:0004850|GO:0005737|GO:0009166 KEGG: 00240+2.4.2.3|KEGG: 00983+2.4.2.3|MetaCyc: PWY-5532 M892_05535 a6dff5350fd5fc046fa7ad401b59874c 252 Pfam PF01048 Phosphorylase superfamily 20 244 2.4E-40 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 M892_05290 dcb4525c3e58b45274dc0b85d99859d5 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 1.7E-27 T 12-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 M892_05290 dcb4525c3e58b45274dc0b85d99859d5 72 SMART SM00316 4 72 4.8E-6 T 12-10-2018 IPR022967 RNA-binding domain, S1 M892_05290 dcb4525c3e58b45274dc0b85d99859d5 72 SUPERFAMILY SSF50249 1 70 9.43E-29 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M892_05290 dcb4525c3e58b45274dc0b85d99859d5 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 1.5E-38 T 12-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 M892_05290 dcb4525c3e58b45274dc0b85d99859d5 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.238 T 12-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 M892_05290 dcb4525c3e58b45274dc0b85d99859d5 72 Gene3D G3DSA:2.40.50.140 1 72 8.4E-37 T 12-10-2018 M892_23595 a373b5cda79e65095119abe65f0fc75d 296 SUPERFAMILY SSF53850 89 294 1.28E-35 T 12-10-2018 M892_23595 a373b5cda79e65095119abe65f0fc75d 296 Gene3D G3DSA:3.40.190.290 91 294 1.9E-52 T 12-10-2018 M892_23595 a373b5cda79e65095119abe65f0fc75d 296 Gene3D G3DSA:1.10.10.10 4 88 3.5E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_23595 a373b5cda79e65095119abe65f0fc75d 296 Pfam PF03466 LysR substrate binding domain 88 293 2.9E-35 T 12-10-2018 IPR005119 LysR, substrate-binding M892_23595 a373b5cda79e65095119abe65f0fc75d 296 SUPERFAMILY SSF46785 6 83 1.02E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_23595 a373b5cda79e65095119abe65f0fc75d 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 6.1E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_16615 967553a3a269e6fb3f332da22d2c4b7f 467 SUPERFAMILY SSF56672 5 225 3.65E-33 T 12-10-2018 M892_16615 967553a3a269e6fb3f332da22d2c4b7f 467 Gene3D G3DSA:1.10.150.20 167 207 4.4E-8 T 12-10-2018 M892_16615 967553a3a269e6fb3f332da22d2c4b7f 467 Gene3D G3DSA:2.30.40.20 27 68 4.4E-8 T 12-10-2018 M892_16615 967553a3a269e6fb3f332da22d2c4b7f 467 Pfam PF00817 impB/mucB/samB family 23 146 2.1E-7 T 12-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 M892_16615 967553a3a269e6fb3f332da22d2c4b7f 467 Gene3D G3DSA:3.30.70.270 69 166 4.4E-8 T 12-10-2018 M892_12880 81af0049b491d933e0528a760d271c64 491 PRINTS PR00045 Sigma-54 factor signature 406 417 7.8E-32 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 M892_12880 81af0049b491d933e0528a760d271c64 491 PRINTS PR00045 Sigma-54 factor signature 464 482 7.8E-32 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 M892_12880 81af0049b491d933e0528a760d271c64 491 PRINTS PR00045 Sigma-54 factor signature 202 219 7.8E-32 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 M892_12880 81af0049b491d933e0528a760d271c64 491 PRINTS PR00045 Sigma-54 factor signature 390 402 7.8E-32 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 M892_12880 81af0049b491d933e0528a760d271c64 491 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 469 476 - T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 M892_12880 81af0049b491d933e0528a760d271c64 491 Pfam PF04963 Sigma-54 factor, core binding domain 130 319 5.5E-60 T 12-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 M892_12880 81af0049b491d933e0528a760d271c64 491 PIRSF PIRSF000774 1 491 1.1E-151 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 M892_12880 81af0049b491d933e0528a760d271c64 491 Gene3D G3DSA:1.10.10.60 431 488 2.3E-23 T 12-10-2018 M892_12880 81af0049b491d933e0528a760d271c64 491 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 378 397 - T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 M892_12880 81af0049b491d933e0528a760d271c64 491 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 488 7.0E-157 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 M892_12880 81af0049b491d933e0528a760d271c64 491 Gene3D G3DSA:1.10.10.1330 132 256 6.6E-26 T 12-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily M892_12880 81af0049b491d933e0528a760d271c64 491 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 49 5.9E-17 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 M892_12880 81af0049b491d933e0528a760d271c64 491 Pfam PF04552 Sigma-54, DNA binding domain 331 489 6.8E-72 T 12-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding M892_26330 5dd9af4a0a7e794afb2013f7b2d32748 350 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 296 316 4.1E-8 T 12-10-2018 M892_26330 5dd9af4a0a7e794afb2013f7b2d32748 350 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 276 295 4.1E-8 T 12-10-2018 M892_26330 5dd9af4a0a7e794afb2013f7b2d32748 350 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 73 91 4.1E-8 T 12-10-2018 M892_26330 5dd9af4a0a7e794afb2013f7b2d32748 350 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 229 255 4.1E-8 T 12-10-2018 M892_26330 5dd9af4a0a7e794afb2013f7b2d32748 350 PRINTS PR01021 OMPA domain signature 243 258 5.8E-10 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M892_26330 5dd9af4a0a7e794afb2013f7b2d32748 350 PRINTS PR01021 OMPA domain signature 258 274 5.8E-10 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M892_26330 5dd9af4a0a7e794afb2013f7b2d32748 350 PRINTS PR01021 OMPA domain signature 212 234 5.8E-10 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M892_26330 5dd9af4a0a7e794afb2013f7b2d32748 350 Pfam PF00691 OmpA family 212 307 6.6E-20 T 12-10-2018 IPR006665 OmpA-like domain M892_26330 5dd9af4a0a7e794afb2013f7b2d32748 350 Gene3D G3DSA:2.60.40.2540 53 199 2.4E-12 T 12-10-2018 M892_26330 5dd9af4a0a7e794afb2013f7b2d32748 350 Gene3D G3DSA:3.30.1330.60 201 322 6.6E-30 T 12-10-2018 IPR036737 OmpA-like domain superfamily M892_26330 5dd9af4a0a7e794afb2013f7b2d32748 350 SUPERFAMILY SSF103088 190 312 4.71E-28 T 12-10-2018 IPR036737 OmpA-like domain superfamily M892_06995 3ab117eea957a7a55f5671e28d3e832a 281 TIGRFAM TIGR03138 QueF: queuine synthase 11 281 2.7E-127 T 12-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 M892_06995 3ab117eea957a7a55f5671e28d3e832a 281 SUPERFAMILY SSF55620 175 267 4.0E-10 T 12-10-2018 M892_06995 3ab117eea957a7a55f5671e28d3e832a 281 Pfam PF14489 QueF-like protein 194 270 1.4E-26 T 12-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 M892_06995 3ab117eea957a7a55f5671e28d3e832a 281 Gene3D G3DSA:3.30.1130.10 143 281 1.2E-62 T 12-10-2018 M892_06995 3ab117eea957a7a55f5671e28d3e832a 281 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 21 129 4.7E-48 T 12-10-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 M892_06995 3ab117eea957a7a55f5671e28d3e832a 281 PIRSF PIRSF004750 6 281 1.5E-129 T 12-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 M892_06995 3ab117eea957a7a55f5671e28d3e832a 281 Gene3D G3DSA:3.30.1130.10 21 138 3.4E-45 T 12-10-2018 M892_06995 3ab117eea957a7a55f5671e28d3e832a 281 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 281 164.003 T 12-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 M892_13480 2e07244f2587fc9dfe1135f3de529b84 433 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 429 1.1E-205 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 M892_13480 2e07244f2587fc9dfe1135f3de529b84 433 Gene3D G3DSA:3.20.20.120 128 433 7.6E-132 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily M892_13480 2e07244f2587fc9dfe1135f3de529b84 433 Pfam PF03952 Enolase, N-terminal domain 4 134 1.8E-58 T 12-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 M892_13480 2e07244f2587fc9dfe1135f3de529b84 433 ProSitePatterns PS00164 Enolase signature. 340 353 - T 12-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_13480 2e07244f2587fc9dfe1135f3de529b84 433 SMART SM01192 143 431 3.7E-212 T 12-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 M892_13480 2e07244f2587fc9dfe1135f3de529b84 433 Gene3D G3DSA:3.30.390.10 1 127 3.3E-55 T 12-10-2018 IPR029017 Enolase-like, N-terminal M892_13480 2e07244f2587fc9dfe1135f3de529b84 433 PIRSF PIRSF001400 1 431 2.1E-191 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 M892_13480 2e07244f2587fc9dfe1135f3de529b84 433 SUPERFAMILY SSF54826 3 138 1.79E-56 T 12-10-2018 M892_13480 2e07244f2587fc9dfe1135f3de529b84 433 SUPERFAMILY SSF51604 143 428 1.26E-125 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily M892_13480 2e07244f2587fc9dfe1135f3de529b84 433 Hamap MF_00318 Enolase [eno]. 2 417 44.327 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 M892_13480 2e07244f2587fc9dfe1135f3de529b84 433 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 430 7.6E-136 T 12-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 M892_13480 2e07244f2587fc9dfe1135f3de529b84 433 SMART SM01193 4 134 1.3E-92 T 12-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 M892_13480 2e07244f2587fc9dfe1135f3de529b84 433 PRINTS PR00148 Enolase signature 369 386 4.0E-44 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 M892_13480 2e07244f2587fc9dfe1135f3de529b84 433 PRINTS PR00148 Enolase signature 317 328 4.0E-44 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 M892_13480 2e07244f2587fc9dfe1135f3de529b84 433 PRINTS PR00148 Enolase signature 165 178 4.0E-44 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 M892_13480 2e07244f2587fc9dfe1135f3de529b84 433 PRINTS PR00148 Enolase signature 340 354 4.0E-44 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 M892_13480 2e07244f2587fc9dfe1135f3de529b84 433 PRINTS PR00148 Enolase signature 37 51 4.0E-44 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 M892_13480 2e07244f2587fc9dfe1135f3de529b84 433 PRINTS PR00148 Enolase signature 107 123 4.0E-44 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 M892_25725 2af62c8c02a1bb10314bb16ece119085 166 SUPERFAMILY SSF55729 3 161 2.06E-36 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_25725 2af62c8c02a1bb10314bb16ece119085 166 Pfam PF00583 Acetyltransferase (GNAT) family 41 136 1.9E-16 T 12-10-2018 IPR000182 GNAT domain M892_25725 2af62c8c02a1bb10314bb16ece119085 166 Gene3D G3DSA:3.40.630.30 1 165 3.4E-41 T 12-10-2018 M892_21775 add9c3e741e6a2f8e8002dac44f59548 289 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 5.2E-35 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 M892_21775 add9c3e741e6a2f8e8002dac44f59548 289 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 5.2E-35 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 M892_21775 add9c3e741e6a2f8e8002dac44f59548 289 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 5.2E-35 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 M892_21775 add9c3e741e6a2f8e8002dac44f59548 289 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 5.2E-35 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 M892_21775 add9c3e741e6a2f8e8002dac44f59548 289 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 5.2E-35 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 M892_21775 add9c3e741e6a2f8e8002dac44f59548 289 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 282 1.5E-128 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 M892_21775 add9c3e741e6a2f8e8002dac44f59548 289 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 281 34.945 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 M892_21775 add9c3e741e6a2f8e8002dac44f59548 289 SUPERFAMILY SSF52096 25 284 1.96E-79 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily M892_21775 add9c3e741e6a2f8e8002dac44f59548 289 Pfam PF01039 Carboxyl transferase domain 96 240 3.6E-13 T 12-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 M892_21775 add9c3e741e6a2f8e8002dac44f59548 289 Gene3D G3DSA:3.90.226.10 25 285 4.7E-77 T 12-10-2018 M892_24070 b37077186984a8f2ff562dc97077e7fc 127 SUPERFAMILY SSF46955 4 118 1.1E-26 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily M892_24070 b37077186984a8f2ff562dc97077e7fc 127 Gene3D G3DSA:1.10.1660.10 1 127 2.7E-27 T 12-10-2018 M892_24070 b37077186984a8f2ff562dc97077e7fc 127 Pfam PF09278 MerR, DNA binding 47 110 2.3E-17 T 12-10-2018 IPR015358 Transcription regulator MerR, DNA binding M892_24070 b37077186984a8f2ff562dc97077e7fc 127 Pfam PF00376 MerR family regulatory protein 5 40 3.9E-10 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 M892_24070 b37077186984a8f2ff562dc97077e7fc 127 SMART SM00422 4 71 1.2E-19 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 M892_16385 d57262e1a48180cb4149f1dc12ac06ff 109 Pfam PF02371 Transposase IS116/IS110/IS902 family 1 57 3.4E-11 T 12-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 M892_04295 d57262e1a48180cb4149f1dc12ac06ff 109 Pfam PF02371 Transposase IS116/IS110/IS902 family 1 57 3.4E-11 T 12-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 M892_08040 d57262e1a48180cb4149f1dc12ac06ff 109 Pfam PF02371 Transposase IS116/IS110/IS902 family 1 57 3.4E-11 T 12-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 M892_19565 d35917b7169dbdcc846e33e17b608ac0 328 Pfam PF13378 Enolase C-terminal domain-like 140 301 1.7E-28 T 12-10-2018 IPR029065 Enolase C-terminal domain-like M892_19565 d35917b7169dbdcc846e33e17b608ac0 328 Gene3D G3DSA:3.20.20.120 122 328 1.6E-57 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily M892_19565 d35917b7169dbdcc846e33e17b608ac0 328 Gene3D G3DSA:3.30.390.10 1 112 1.2E-27 T 12-10-2018 IPR029017 Enolase-like, N-terminal M892_19565 d35917b7169dbdcc846e33e17b608ac0 328 SUPERFAMILY SSF51604 123 321 1.97E-53 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily M892_19565 d35917b7169dbdcc846e33e17b608ac0 328 SUPERFAMILY SSF54826 2 114 5.66E-23 T 12-10-2018 M892_19565 d35917b7169dbdcc846e33e17b608ac0 328 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 8 112 2.7E-10 T 12-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain M892_19565 d35917b7169dbdcc846e33e17b608ac0 328 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 180 211 - T 12-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 M892_19565 d35917b7169dbdcc846e33e17b608ac0 328 SMART SM00922 137 230 1.6E-16 T 12-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal M892_06525 b5794357d568d47ac562b03dcf175c73 377 Gene3D G3DSA:1.20.1330.10 199 315 1.2E-10 T 12-10-2018 M892_06525 b5794357d568d47ac562b03dcf175c73 377 SUPERFAMILY SSF64518 1 376 1.7E-96 T 12-10-2018 M892_06525 b5794357d568d47ac562b03dcf175c73 377 Pfam PF00700 Bacterial flagellin C-terminal helical region 292 376 5.7E-26 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 M892_06525 b5794357d568d47ac562b03dcf175c73 377 PRINTS PR00207 Flagellin signature 37 54 2.5E-27 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 M892_06525 b5794357d568d47ac562b03dcf175c73 377 PRINTS PR00207 Flagellin signature 111 134 2.5E-27 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 M892_06525 b5794357d568d47ac562b03dcf175c73 377 PRINTS PR00207 Flagellin signature 76 95 2.5E-27 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 M892_06525 b5794357d568d47ac562b03dcf175c73 377 Gene3D G3DSA:1.10.8.410 325 376 1.9E-20 T 12-10-2018 M892_06525 b5794357d568d47ac562b03dcf175c73 377 Gene3D G3DSA:1.20.1330.10 45 174 1.1E-71 T 12-10-2018 M892_06525 b5794357d568d47ac562b03dcf175c73 377 Pfam PF00669 Bacterial flagellin N-terminal helical region 6 141 4.5E-41 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 M892_06525 b5794357d568d47ac562b03dcf175c73 377 Pfam PF07196 Flagellin hook IN motif 195 249 3.1E-11 T 12-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 M892_06525 b5794357d568d47ac562b03dcf175c73 377 Gene3D G3DSA:1.20.58.1830 7 33 1.1E-71 T 12-10-2018 M892_06215 de9c3f3de9237ff6c20183a46fa451e2 1141 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 1087 1128 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 M892_06215 de9c3f3de9237ff6c20183a46fa451e2 1141 Pfam PF12833 Helix-turn-helix domain 1057 1131 1.1E-20 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M892_06215 de9c3f3de9237ff6c20183a46fa451e2 1141 SMART SM00342 1050 1132 8.9E-25 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M892_06215 de9c3f3de9237ff6c20183a46fa451e2 1141 Gene3D G3DSA:2.130.10.10 193 387 6.2E-19 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 M892_06215 de9c3f3de9237ff6c20183a46fa451e2 1141 Gene3D G3DSA:2.130.10.10 395 629 2.3E-20 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 M892_06215 de9c3f3de9237ff6c20183a46fa451e2 1141 Gene3D G3DSA:3.30.565.10 865 1014 3.9E-6 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_06215 de9c3f3de9237ff6c20183a46fa451e2 1141 SUPERFAMILY SSF63829 264 449 2.75E-13 T 12-10-2018 M892_06215 de9c3f3de9237ff6c20183a46fa451e2 1141 SUPERFAMILY SSF46689 1086 1131 4.93E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_06215 de9c3f3de9237ff6c20183a46fa451e2 1141 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 1101 1116 1.6E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 M892_06215 de9c3f3de9237ff6c20183a46fa451e2 1141 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 1116 1132 1.6E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 M892_06215 de9c3f3de9237ff6c20183a46fa451e2 1141 Gene3D G3DSA:1.10.10.60 1029 1140 6.1E-25 T 12-10-2018 M892_24540 7b2c209fd8917ddb486a7e846a9a5208 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 3.2E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_24540 7b2c209fd8917ddb486a7e846a9a5208 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 3.2E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_24540 7b2c209fd8917ddb486a7e846a9a5208 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 3.2E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_24540 7b2c209fd8917ddb486a7e846a9a5208 246 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 3 245 1.8E-115 T 12-10-2018 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|MetaCyc: PWY-7948 M892_24540 7b2c209fd8917ddb486a7e846a9a5208 246 Gene3D G3DSA:3.40.50.720 1 245 2.6E-76 T 12-10-2018 M892_24540 7b2c209fd8917ddb486a7e846a9a5208 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 184 9.7E-4 T 12-10-2018 M892_24540 7b2c209fd8917ddb486a7e846a9a5208 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 2.2E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_24540 7b2c209fd8917ddb486a7e846a9a5208 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 2.2E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_24540 7b2c209fd8917ddb486a7e846a9a5208 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.2E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_24540 7b2c209fd8917ddb486a7e846a9a5208 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 2.2E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_24540 7b2c209fd8917ddb486a7e846a9a5208 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 2.2E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_24540 7b2c209fd8917ddb486a7e846a9a5208 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.2E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_24540 7b2c209fd8917ddb486a7e846a9a5208 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 M892_24540 7b2c209fd8917ddb486a7e846a9a5208 246 SUPERFAMILY SSF51735 2 245 1.27E-78 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_24540 7b2c209fd8917ddb486a7e846a9a5208 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 243 9.1E-59 T 12-10-2018 M892_19460 b654deb5e9e59644cd1b25df3df68e85 504 PRINTS PR00067 Catalase signature 336 362 1.9E-67 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 M892_19460 b654deb5e9e59644cd1b25df3df68e85 504 PRINTS PR00067 Catalase signature 122 139 1.9E-67 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 M892_19460 b654deb5e9e59644cd1b25df3df68e85 504 PRINTS PR00067 Catalase signature 38 61 1.9E-67 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 M892_19460 b654deb5e9e59644cd1b25df3df68e85 504 PRINTS PR00067 Catalase signature 141 159 1.9E-67 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 M892_19460 b654deb5e9e59644cd1b25df3df68e85 504 PRINTS PR00067 Catalase signature 304 331 1.9E-67 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 M892_19460 b654deb5e9e59644cd1b25df3df68e85 504 PRINTS PR00067 Catalase signature 101 119 1.9E-67 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 M892_19460 b654deb5e9e59644cd1b25df3df68e85 504 Pfam PF00199 Catalase 25 402 1.6E-165 T 12-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 M892_19460 b654deb5e9e59644cd1b25df3df68e85 504 Gene3D G3DSA:2.40.180.10 21 504 1.9E-203 T 12-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 M892_19460 b654deb5e9e59644cd1b25df3df68e85 504 ProSitePatterns PS00438 Catalase proximal active site signature. 61 77 - T 12-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 M892_19460 b654deb5e9e59644cd1b25df3df68e85 504 PIRSF PIRSF038928 15 497 1.1E-187 T 12-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 M892_19460 b654deb5e9e59644cd1b25df3df68e85 504 SUPERFAMILY SSF56634 20 499 2.49E-190 T 12-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 M892_19460 b654deb5e9e59644cd1b25df3df68e85 504 Pfam PF06628 Catalase-related immune-responsive 432 490 6.9E-19 T 12-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 M892_19460 b654deb5e9e59644cd1b25df3df68e85 504 SMART SM01060 25 407 4.4E-238 T 12-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 M892_19460 b654deb5e9e59644cd1b25df3df68e85 504 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 349 357 - T 12-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 M892_02755 83193b954c68fdfaff7bd74aac0a165f 314 Pfam PF01032 FecCD transport family 10 310 3.4E-67 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 M892_02755 83193b954c68fdfaff7bd74aac0a165f 314 SUPERFAMILY SSF81345 5 310 1.31E-66 T 12-10-2018 IPR037294 ABC transporter, BtuC-like M892_02755 83193b954c68fdfaff7bd74aac0a165f 314 Gene3D G3DSA:1.10.3470.10 1 314 9.2E-65 T 12-10-2018 IPR037294 ABC transporter, BtuC-like M892_09165 66f8c0e8dcfde5355e0ad79ff25dde83 105 SUPERFAMILY SSF50104 4 102 6.45E-34 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily M892_09165 66f8c0e8dcfde5355e0ad79ff25dde83 105 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 102 1.1E-22 T 12-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_09165 66f8c0e8dcfde5355e0ad79ff25dde83 105 Gene3D G3DSA:2.30.30.30 2 104 1.4E-39 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 M892_09165 66f8c0e8dcfde5355e0ad79ff25dde83 105 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 20.041 T 12-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_09165 66f8c0e8dcfde5355e0ad79ff25dde83 105 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 12-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_09165 66f8c0e8dcfde5355e0ad79ff25dde83 105 Pfam PF00467 KOW motif 8 37 7.8E-6 T 12-10-2018 IPR005824 KOW M892_09165 66f8c0e8dcfde5355e0ad79ff25dde83 105 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 8.2E-40 T 12-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_09165 66f8c0e8dcfde5355e0ad79ff25dde83 105 SMART SM00739 4 31 3.4E-4 T 12-10-2018 IPR005824 KOW M892_11130 8cbbf9dcc4ba3784a751f69e46bd6dbe 104 ProSitePatterns PS01344 Frataxin family signature. 48 62 - T 12-10-2018 IPR020895 Frataxin conserved site Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 M892_11130 8cbbf9dcc4ba3784a751f69e46bd6dbe 104 SUPERFAMILY SSF55387 1 103 2.44E-38 T 12-10-2018 M892_11130 8cbbf9dcc4ba3784a751f69e46bd6dbe 104 Pfam PF01491 Frataxin-like domain 1 100 4.8E-29 T 12-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 M892_11130 8cbbf9dcc4ba3784a751f69e46bd6dbe 104 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 2 103 2.4E-42 T 12-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 M892_11130 8cbbf9dcc4ba3784a751f69e46bd6dbe 104 Gene3D G3DSA:3.30.920.10 1 104 1.7E-37 T 12-10-2018 IPR036524 Frataxin/CyaY superfamily GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 M892_11130 8cbbf9dcc4ba3784a751f69e46bd6dbe 104 Hamap MF_00142 Iron-sulfur cluster assembly protein CyaY [cyaY]. 1 103 27.189 T 12-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 M892_11130 8cbbf9dcc4ba3784a751f69e46bd6dbe 104 SMART SM01219 1 104 1.4E-53 T 12-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 M892_19875 7b3b131d4b583afb1065fcc9e47a3eee 527 SUPERFAMILY SSF52540 73 359 8.65E-74 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_19875 7b3b131d4b583afb1065fcc9e47a3eee 527 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site M892_19875 7b3b131d4b583afb1065fcc9e47a3eee 527 Pfam PF00270 DEAD/DEAH box helicase 26 194 1.6E-47 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 M892_19875 7b3b131d4b583afb1065fcc9e47a3eee 527 SMART SM00490 257 338 4.1E-31 T 12-10-2018 IPR001650 Helicase, C-terminal M892_19875 7b3b131d4b583afb1065fcc9e47a3eee 527 SMART SM00487 20 219 1.1E-62 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain M892_19875 7b3b131d4b583afb1065fcc9e47a3eee 527 Gene3D G3DSA:3.40.50.300 215 436 4.4E-45 T 12-10-2018 M892_19875 7b3b131d4b583afb1065fcc9e47a3eee 527 Gene3D G3DSA:3.40.50.300 1 209 9.6E-77 T 12-10-2018 M892_19875 7b3b131d4b583afb1065fcc9e47a3eee 527 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 514 50.825 T 12-10-2018 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 M892_19875 7b3b131d4b583afb1065fcc9e47a3eee 527 Pfam PF00271 Helicase conserved C-terminal domain 232 338 6.6E-27 T 12-10-2018 IPR001650 Helicase, C-terminal M892_14100 edc7b78d2d12ae13fe45dd0247968d6b 151 Pfam PF17384 RimP C-terminal SH3 domain 86 151 1.2E-20 T 12-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal M892_14100 edc7b78d2d12ae13fe45dd0247968d6b 151 Pfam PF02576 RimP N-terminal domain 12 83 1.1E-28 T 12-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal M892_14100 edc7b78d2d12ae13fe45dd0247968d6b 151 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 151 24.075 T 12-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 M892_14100 edc7b78d2d12ae13fe45dd0247968d6b 151 SUPERFAMILY SSF75420 2 83 1.05E-25 T 12-10-2018 IPR035956 RimP, N-terminal domain superfamily M892_14100 edc7b78d2d12ae13fe45dd0247968d6b 151 Gene3D G3DSA:3.30.300.70 1 80 1.4E-25 T 12-10-2018 IPR035956 RimP, N-terminal domain superfamily M892_14100 edc7b78d2d12ae13fe45dd0247968d6b 151 SUPERFAMILY SSF74942 84 151 5.49E-17 T 12-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily M892_18990 4312da23b9a23a060e0469b93098098c 192 Gene3D G3DSA:2.170.170.11 18 134 3.5E-29 T 12-10-2018 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 M892_18990 4312da23b9a23a060e0469b93098098c 192 SUPERFAMILY SSF51645 20 187 5.36E-26 T 12-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 M892_20770 853437fef86806fa3a0be33e49330700 520 SMART SM00091 8 75 7.2E-5 T 12-10-2018 IPR000014 PAS domain M892_20770 853437fef86806fa3a0be33e49330700 520 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 332 484 1.0E-33 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M892_20770 853437fef86806fa3a0be33e49330700 520 Pfam PF08447 PAS fold 31 114 2.1E-12 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 M892_20770 853437fef86806fa3a0be33e49330700 520 Gene3D G3DSA:3.30.450.20 2 120 1.9E-23 T 12-10-2018 M892_20770 853437fef86806fa3a0be33e49330700 520 SMART SM00283 257 518 2.3E-46 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M892_20770 853437fef86806fa3a0be33e49330700 520 Gene3D G3DSA:1.10.287.950 202 519 3.6E-55 T 12-10-2018 M892_20770 853437fef86806fa3a0be33e49330700 520 SUPERFAMILY SSF55785 17 114 8.38E-26 T 12-10-2018 IPR035965 PAS domain superfamily M892_20770 853437fef86806fa3a0be33e49330700 520 SUPERFAMILY SSF58104 263 518 9.68E-59 T 12-10-2018 M892_20770 853437fef86806fa3a0be33e49330700 520 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 12 109 1.1E-12 T 12-10-2018 IPR000014 PAS domain M892_24560 530e64cce73e59cc2ea393d57463be0a 612 Gene3D G3DSA:3.30.1360.200 288 428 6.4E-47 T 12-10-2018 M892_24560 530e64cce73e59cc2ea393d57463be0a 612 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 15 612 43.107 T 12-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 M892_24560 530e64cce73e59cc2ea393d57463be0a 612 SUPERFAMILY SSF82866 407 604 2.09E-40 T 12-10-2018 M892_24560 530e64cce73e59cc2ea393d57463be0a 612 Pfam PF13721 SecD export protein N-terminal TM region 14 109 6.9E-22 T 12-10-2018 IPR027398 SecD export protein N-terminal TM domain M892_24560 530e64cce73e59cc2ea393d57463be0a 612 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 134 598 3.8E-131 T 12-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 M892_24560 530e64cce73e59cc2ea393d57463be0a 612 Gene3D G3DSA:3.30.70.3400 230 434 6.4E-47 T 12-10-2018 M892_24560 530e64cce73e59cc2ea393d57463be0a 612 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 348 590 3.4E-73 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial M892_24560 530e64cce73e59cc2ea393d57463be0a 612 Pfam PF07549 SecD/SecF GG Motif 128 150 2.1E-4 T 12-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site M892_24560 530e64cce73e59cc2ea393d57463be0a 612 Pfam PF02355 Protein export membrane protein 430 598 1.4E-17 T 12-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial M892_08020 620a0885ed3801157e9992485542a19e 86 SUPERFAMILY SSF46992 3 86 1.83E-32 T 12-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_08020 620a0885ed3801157e9992485542a19e 86 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 86 7.0E-23 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_08020 620a0885ed3801157e9992485542a19e 86 Gene3D G3DSA:1.20.58.110 1 86 4.4E-30 T 12-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_08020 620a0885ed3801157e9992485542a19e 86 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.687 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_08020 620a0885ed3801157e9992485542a19e 86 Pfam PF01649 Ribosomal protein S20 2 84 1.0E-27 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_08020 620a0885ed3801157e9992485542a19e 86 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 85 9.4E-32 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_04365 a5a0b74e9ddcf2b7cdbd7de786570604 233 Gene3D G3DSA:3.60.20.10 1 233 1.2E-49 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal M892_04365 a5a0b74e9ddcf2b7cdbd7de786570604 233 SUPERFAMILY SSF56235 1 231 1.23E-56 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal M892_04365 a5a0b74e9ddcf2b7cdbd7de786570604 233 Pfam PF06267 Family of unknown function (DUF1028) 2 207 2.3E-43 T 12-10-2018 IPR010430 Protein of unknown function DUF1028 M892_15290 8b84c9ad10e62aa5491881cd257702d5 348 SUPERFAMILY SSF101801 247 322 5.49E-14 T 12-10-2018 IPR036429 SpoA-like superfamily M892_15290 8b84c9ad10e62aa5491881cd257702d5 348 Gene3D G3DSA:3.40.1550.10 43 230 1.3E-55 T 12-10-2018 IPR028976 CheC-like superfamily M892_15290 8b84c9ad10e62aa5491881cd257702d5 348 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 3 320 3.0E-124 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 M892_15290 8b84c9ad10e62aa5491881cd257702d5 348 PIRSF PIRSF002888 1 328 1.7E-92 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 M892_15290 8b84c9ad10e62aa5491881cd257702d5 348 PRINTS PR00955 Flagellar motor switch protein FliM signature 2 15 9.9E-19 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 M892_15290 8b84c9ad10e62aa5491881cd257702d5 348 PRINTS PR00955 Flagellar motor switch protein FliM signature 88 104 9.9E-19 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 M892_15290 8b84c9ad10e62aa5491881cd257702d5 348 PRINTS PR00955 Flagellar motor switch protein FliM signature 113 132 9.9E-19 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 M892_15290 8b84c9ad10e62aa5491881cd257702d5 348 PRINTS PR00955 Flagellar motor switch protein FliM signature 211 229 9.9E-19 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 M892_15290 8b84c9ad10e62aa5491881cd257702d5 348 Pfam PF02154 Flagellar motor switch protein FliM 37 229 2.2E-83 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 M892_15290 8b84c9ad10e62aa5491881cd257702d5 348 SUPERFAMILY SSF103039 4 230 5.49E-21 T 12-10-2018 IPR028976 CheC-like superfamily M892_15290 8b84c9ad10e62aa5491881cd257702d5 348 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 250 319 2.4E-17 T 12-10-2018 IPR001543 Surface presentation of antigen (SpoA) M892_00955 076b647877e854df22f64001f4553fbf 156 Pfam PF01609 Transposase DDE domain 85 154 9.4E-6 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_00955 076b647877e854df22f64001f4553fbf 156 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 2 73 5.4E-26 T 12-10-2018 IPR025161 Putative transposase IS4/IS5 family M892_11595 3d32927fd866c78675a3f864ce8f2e28 429 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 12-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 M892_11595 3d32927fd866c78675a3f864ce8f2e28 429 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 423 44.127 T 12-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 M892_11595 3d32927fd866c78675a3f864ce8f2e28 429 SUPERFAMILY SSF56059 104 319 5.66E-67 T 12-10-2018 M892_11595 3d32927fd866c78675a3f864ce8f2e28 429 SMART SM01210 330 423 1.6E-55 T 12-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 M892_11595 3d32927fd866c78675a3f864ce8f2e28 429 Gene3D G3DSA:3.30.1490.20 121 190 6.3E-29 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 M892_11595 3d32927fd866c78675a3f864ce8f2e28 429 Gene3D G3DSA:3.30.470.20 191 329 5.7E-62 T 12-10-2018 M892_11595 3d32927fd866c78675a3f864ce8f2e28 429 SUPERFAMILY SSF51246 329 424 2.25E-33 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 M892_11595 3d32927fd866c78675a3f864ce8f2e28 429 Gene3D G3DSA:3.90.600.10 330 429 7.1E-35 T 12-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 M892_11595 3d32927fd866c78675a3f864ce8f2e28 429 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 1.9E-35 T 12-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 M892_11595 3d32927fd866c78675a3f864ce8f2e28 429 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 423 5.0E-186 T 12-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 M892_11595 3d32927fd866c78675a3f864ce8f2e28 429 Gene3D G3DSA:3.40.50.20 2 95 7.8E-38 T 12-10-2018 M892_11595 3d32927fd866c78675a3f864ce8f2e28 429 SUPERFAMILY SSF52440 1 103 1.4E-36 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily M892_11595 3d32927fd866c78675a3f864ce8f2e28 429 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 332 421 2.5E-29 T 12-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 M892_11595 3d32927fd866c78675a3f864ce8f2e28 429 SMART SM01209 103 296 1.5E-140 T 12-10-2018 M892_11595 3d32927fd866c78675a3f864ce8f2e28 429 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 1.0E-82 T 12-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 M892_12250 f55a5cfdb39060fd7caed89ab79f7960 335 Gene3D G3DSA:3.40.50.1820 34 312 4.0E-25 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_12250 f55a5cfdb39060fd7caed89ab79f7960 335 Pfam PF00561 alpha/beta hydrolase fold 61 301 1.4E-19 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 M892_12250 f55a5cfdb39060fd7caed89ab79f7960 335 ProSitePatterns PS01133 Uncharacterized protein family UPF0017 signature. 227 268 - T 12-10-2018 IPR000952 AB hydrolase 4, conserved site M892_12250 f55a5cfdb39060fd7caed89ab79f7960 335 SUPERFAMILY SSF53474 32 299 3.22E-39 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_12250 f55a5cfdb39060fd7caed89ab79f7960 335 PIRSF PIRSF005211 1 329 1.3E-105 T 12-10-2018 IPR012020 AB hydrolase 4 family M892_26560 d640d324afe1686ccf00c343ea2dce9b 299 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 141 3.7E-14 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 M892_26560 d640d324afe1686ccf00c343ea2dce9b 299 SUPERFAMILY SSF64518 1 297 1.7E-56 T 12-10-2018 M892_26560 d640d324afe1686ccf00c343ea2dce9b 299 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 183 2.6E-55 T 12-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 M892_02225 4ae8279a7de44ccd48dc35714ac46e1a 390 Pfam PF00534 Glycosyl transferases group 1 197 334 4.3E-13 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 M892_02225 4ae8279a7de44ccd48dc35714ac46e1a 390 SUPERFAMILY SSF53756 9 358 4.66E-28 T 12-10-2018 M892_02225 4ae8279a7de44ccd48dc35714ac46e1a 390 Gene3D G3DSA:3.40.50.2000 175 350 2.9E-20 T 12-10-2018 M892_02225 4ae8279a7de44ccd48dc35714ac46e1a 390 Gene3D G3DSA:3.40.50.2000 10 358 2.9E-20 T 12-10-2018 M892_09160 d1cd0ecc56eb32bf76547d6a1743ca81 179 Gene3D G3DSA:3.30.1440.10 1 179 1.5E-80 T 12-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_09160 d1cd0ecc56eb32bf76547d6a1743ca81 179 Pfam PF00281 Ribosomal protein L5 24 80 3.5E-29 T 12-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_09160 d1cd0ecc56eb32bf76547d6a1743ca81 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 1.1E-40 T 12-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_09160 d1cd0ecc56eb32bf76547d6a1743ca81 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 44.911 T 12-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_09160 d1cd0ecc56eb32bf76547d6a1743ca81 179 PIRSF PIRSF002161 1 179 1.9E-66 T 12-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_09160 d1cd0ecc56eb32bf76547d6a1743ca81 179 SUPERFAMILY SSF55282 4 179 1.77E-78 T 12-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_09160 d1cd0ecc56eb32bf76547d6a1743ca81 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 12-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_14245 4f7eb9de0e16487b099483cee1dc8618 459 SUPERFAMILY SSF54211 257 456 4.17E-43 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold M892_14245 4f7eb9de0e16487b099483cee1dc8618 459 Gene3D G3DSA:3.40.50.300 68 280 4.2E-38 T 12-10-2018 M892_14245 4f7eb9de0e16487b099483cee1dc8618 459 SUPERFAMILY SSF52540 70 294 1.22E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_14245 4f7eb9de0e16487b099483cee1dc8618 459 SMART SM00382 93 246 4.2E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_14245 4f7eb9de0e16487b099483cee1dc8618 459 PRINTS PR01874 DNA repair protein radA signature 176 200 1.1E-93 T 12-10-2018 M892_14245 4f7eb9de0e16487b099483cee1dc8618 459 PRINTS PR01874 DNA repair protein radA signature 324 347 1.1E-93 T 12-10-2018 M892_14245 4f7eb9de0e16487b099483cee1dc8618 459 PRINTS PR01874 DNA repair protein radA signature 85 113 1.1E-93 T 12-10-2018 M892_14245 4f7eb9de0e16487b099483cee1dc8618 459 PRINTS PR01874 DNA repair protein radA signature 215 243 1.1E-93 T 12-10-2018 M892_14245 4f7eb9de0e16487b099483cee1dc8618 459 PRINTS PR01874 DNA repair protein radA signature 10 34 1.1E-93 T 12-10-2018 M892_14245 4f7eb9de0e16487b099483cee1dc8618 459 PRINTS PR01874 DNA repair protein radA signature 126 143 1.1E-93 T 12-10-2018 M892_14245 4f7eb9de0e16487b099483cee1dc8618 459 PRINTS PR01874 DNA repair protein radA signature 250 276 1.1E-93 T 12-10-2018 M892_14245 4f7eb9de0e16487b099483cee1dc8618 459 Gene3D G3DSA:3.30.230.10 314 458 1.1E-21 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M892_14245 4f7eb9de0e16487b099483cee1dc8618 459 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 453 1.5E-225 T 12-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 M892_14245 4f7eb9de0e16487b099483cee1dc8618 459 Hamap MF_01498 DNA repair protein RadA [radA]. 21 457 43.049 T 12-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 M892_14245 4f7eb9de0e16487b099483cee1dc8618 459 Pfam PF13541 Subunit ChlI of Mg-chelatase 347 432 1.5E-9 T 12-10-2018 M892_14245 4f7eb9de0e16487b099483cee1dc8618 459 Pfam PF13481 AAA domain 85 224 1.1E-12 T 12-10-2018 M892_26590 6b53aff766a82174731afea1ff8e1e11 243 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 6 220 7.7E-55 T 12-10-2018 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 M892_26590 6b53aff766a82174731afea1ff8e1e11 243 SUPERFAMILY SSF117143 77 176 1.7E-11 T 12-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like M892_26590 6b53aff766a82174731afea1ff8e1e11 243 Pfam PF00460 Flagella basal body rod protein 7 35 1.3E-5 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 M892_26590 6b53aff766a82174731afea1ff8e1e11 243 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 120 2.0E-30 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G M892_26590 6b53aff766a82174731afea1ff8e1e11 243 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 167 239 8.9E-16 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain M892_19750 c7e67b3aec398af7e003b5888a635ecf 418 Gene3D G3DSA:3.90.170.10 266 418 8.4E-50 T 12-10-2018 M892_19750 c7e67b3aec398af7e003b5888a635ecf 418 SUPERFAMILY SSF52540 1 417 1.49E-120 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_19750 c7e67b3aec398af7e003b5888a635ecf 418 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 418 140.668 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 M892_19750 c7e67b3aec398af7e003b5888a635ecf 418 Pfam PF00709 Adenylosuccinate synthetase 4 416 2.3E-129 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 M892_19750 c7e67b3aec398af7e003b5888a635ecf 418 SMART SM00788 3 417 2.0E-173 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 M892_19750 c7e67b3aec398af7e003b5888a635ecf 418 Gene3D G3DSA:3.40.440.10 6 255 6.8E-72 T 12-10-2018 M892_19750 c7e67b3aec398af7e003b5888a635ecf 418 Gene3D G3DSA:1.10.300.10 99 200 6.8E-72 T 12-10-2018 M892_26275 1b41658809385b34d910115ef6055712 307 SUPERFAMILY SSF103481 182 287 1.83E-7 T 12-10-2018 M892_26275 1b41658809385b34d910115ef6055712 307 SUPERFAMILY SSF103481 41 140 1.44E-10 T 12-10-2018 M892_26275 1b41658809385b34d910115ef6055712 307 Pfam PF00892 EamA-like transporter family 6 136 1.1E-12 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M892_26275 1b41658809385b34d910115ef6055712 307 Pfam PF00892 EamA-like transporter family 153 288 8.1E-10 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M892_13755 ef8aa7c8d9983b79507df31b214a6a54 295 SUPERFAMILY SSF54675 15 128 2.79E-33 T 12-10-2018 M892_13755 ef8aa7c8d9983b79507df31b214a6a54 295 Gene3D G3DSA:3.20.20.70 138 284 3.3E-125 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M892_13755 ef8aa7c8d9983b79507df31b214a6a54 295 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 42 127 7.0E-27 T 12-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 M892_13755 ef8aa7c8d9983b79507df31b214a6a54 295 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 26 294 3.0E-94 T 12-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 M892_13755 ef8aa7c8d9983b79507df31b214a6a54 295 PIRSF PIRSF006250 16 295 4.5E-101 T 12-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 M892_13755 ef8aa7c8d9983b79507df31b214a6a54 295 Gene3D G3DSA:3.90.1170.20 21 293 3.3E-125 T 12-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 M892_13755 ef8aa7c8d9983b79507df31b214a6a54 295 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 130 293 7.7E-58 T 12-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 M892_13755 ef8aa7c8d9983b79507df31b214a6a54 295 SUPERFAMILY SSF51690 130 294 2.83E-59 T 12-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 M892_16705 7dd3c364b93794bd1a1fcaea39e28101 703 Pfam PF13899 Thioredoxin-like 587 673 7.0E-11 T 12-10-2018 M892_16705 7dd3c364b93794bd1a1fcaea39e28101 703 SUPERFAMILY SSF52833 579 675 2.56E-12 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M892_16705 7dd3c364b93794bd1a1fcaea39e28101 703 Pfam PF11412 Disulphide bond corrector protein DsbC 58 162 3.3E-16 T 12-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain M892_16705 7dd3c364b93794bd1a1fcaea39e28101 703 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 308 511 6.3E-15 T 12-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 M892_16705 7dd3c364b93794bd1a1fcaea39e28101 703 Gene3D G3DSA:3.40.30.10 584 696 1.4E-8 T 12-10-2018 M892_16705 7dd3c364b93794bd1a1fcaea39e28101 703 ProSitePatterns PS00194 Thioredoxin family active site. 606 624 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 M892_26805 ec6ff07e0289e2a7ad8f20fe0a4a3a74 374 Pfam PF01546 Peptidase family M20/M25/M40 73 370 2.7E-24 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 M892_26805 ec6ff07e0289e2a7ad8f20fe0a4a3a74 374 SUPERFAMILY SSF55031 177 282 2.62E-23 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain M892_26805 ec6ff07e0289e2a7ad8f20fe0a4a3a74 374 Pfam PF07687 Peptidase dimerisation domain 175 274 2.1E-21 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain M892_26805 ec6ff07e0289e2a7ad8f20fe0a4a3a74 374 SUPERFAMILY SSF53187 2 373 2.32E-41 T 12-10-2018 M892_26805 ec6ff07e0289e2a7ad8f20fe0a4a3a74 374 Gene3D G3DSA:3.30.70.360 177 286 1.3E-102 T 12-10-2018 M892_26805 ec6ff07e0289e2a7ad8f20fe0a4a3a74 374 PIRSF PIRSF037238 1 373 2.3E-147 T 12-10-2018 IPR017150 Peptidase M20, glutamate carboxypeptidase M892_26805 ec6ff07e0289e2a7ad8f20fe0a4a3a74 374 Gene3D G3DSA:3.40.630.10 11 361 1.3E-102 T 12-10-2018 M892_15165 203c418d7e8eb414bcda5dcfda11d166 110 Pfam PF13698 Domain of unknown function (DUF4156) 26 109 1.6E-21 T 12-10-2018 IPR025294 Protein of unknown function DUF4156 M892_13425 3efd97ad38e81371f9716c65dca7a105 225 Pfam PF14622 Ribonuclease-III-like 20 140 1.0E-32 T 12-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 M892_13425 3efd97ad38e81371f9716c65dca7a105 225 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 8 222 1.3E-74 T 12-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 M892_13425 3efd97ad38e81371f9716c65dca7a105 225 Pfam PF00035 Double-stranded RNA binding motif 155 222 2.1E-15 T 12-10-2018 IPR014720 Double-stranded RNA-binding domain M892_13425 3efd97ad38e81371f9716c65dca7a105 225 SUPERFAMILY SSF69065 5 158 5.23E-50 T 12-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 M892_13425 3efd97ad38e81371f9716c65dca7a105 225 SMART SM00358 155 223 4.5E-22 T 12-10-2018 IPR014720 Double-stranded RNA-binding domain M892_13425 3efd97ad38e81371f9716c65dca7a105 225 SUPERFAMILY SSF54768 108 222 1.89E-28 T 12-10-2018 M892_13425 3efd97ad38e81371f9716c65dca7a105 225 Gene3D G3DSA:1.10.1520.10 2 146 2.9E-44 T 12-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 M892_13425 3efd97ad38e81371f9716c65dca7a105 225 Hamap MF_00104 Ribonuclease 3 [rnc]. 8 219 30.058 T 12-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 M892_13425 3efd97ad38e81371f9716c65dca7a105 225 Gene3D G3DSA:3.30.160.20 153 224 1.2E-19 T 12-10-2018 M892_13425 3efd97ad38e81371f9716c65dca7a105 225 SMART SM00535 20 148 2.7E-55 T 12-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 M892_13425 3efd97ad38e81371f9716c65dca7a105 225 ProSitePatterns PS00517 Ribonuclease III family signature. 37 45 - T 12-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 M892_20750 989518f8e448c02b8a630d57d8252656 326 Pfam PF00691 OmpA family 213 308 5.2E-25 T 12-10-2018 IPR006665 OmpA-like domain M892_20750 989518f8e448c02b8a630d57d8252656 326 Gene3D G3DSA:3.30.1330.60 194 320 1.3E-43 T 12-10-2018 IPR036737 OmpA-like domain superfamily M892_20750 989518f8e448c02b8a630d57d8252656 326 SUPERFAMILY SSF56925 22 179 3.92E-32 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel M892_20750 989518f8e448c02b8a630d57d8252656 326 Gene3D G3DSA:2.40.160.20 9 193 7.7E-41 T 12-10-2018 M892_20750 989518f8e448c02b8a630d57d8252656 326 SUPERFAMILY SSF103088 199 313 5.23E-38 T 12-10-2018 IPR036737 OmpA-like domain superfamily M892_20750 989518f8e448c02b8a630d57d8252656 326 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 297 317 7.9E-9 T 12-10-2018 M892_20750 989518f8e448c02b8a630d57d8252656 326 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 259 276 7.9E-9 T 12-10-2018 M892_20750 989518f8e448c02b8a630d57d8252656 326 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 277 296 7.9E-9 T 12-10-2018 M892_20750 989518f8e448c02b8a630d57d8252656 326 Pfam PF13505 Outer membrane protein beta-barrel domain 6 179 2.1E-21 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel M892_20750 989518f8e448c02b8a630d57d8252656 326 PRINTS PR01021 OMPA domain signature 214 236 8.5E-16 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M892_20750 989518f8e448c02b8a630d57d8252656 326 PRINTS PR01021 OMPA domain signature 244 259 8.5E-16 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M892_20750 989518f8e448c02b8a630d57d8252656 326 PRINTS PR01021 OMPA domain signature 259 275 8.5E-16 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M892_27255 720c051f9860b987b7d770feb8ea765c 254 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 3.6E-5 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 M892_27255 720c051f9860b987b7d770feb8ea765c 254 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 3.6E-5 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 M892_27255 720c051f9860b987b7d770feb8ea765c 254 SMART SM00420 6 58 9.8E-19 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 M892_27255 720c051f9860b987b7d770feb8ea765c 254 Gene3D G3DSA:1.10.10.10 1 60 6.5E-9 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_27255 720c051f9860b987b7d770feb8ea765c 254 SUPERFAMILY SSF46785 5 58 4.37E-12 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_27255 720c051f9860b987b7d770feb8ea765c 254 SUPERFAMILY SSF100950 75 233 1.15E-25 T 12-10-2018 IPR037171 NagB/RpiA transferase-like M892_27255 720c051f9860b987b7d770feb8ea765c 254 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 3.4E-14 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 M892_27255 720c051f9860b987b7d770feb8ea765c 254 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 12-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 M892_27255 720c051f9860b987b7d770feb8ea765c 254 SMART SM01134 73 233 5.1E-62 T 12-10-2018 M892_27255 720c051f9860b987b7d770feb8ea765c 254 Pfam PF00455 DeoR C terminal sensor domain 75 232 2.9E-48 T 12-10-2018 IPR014036 DeoR C-terminal sensor domain M892_09085 2a58e5cafda7649e75615285c7b61009 159 Pfam PF11075 Protein of unknown function VcgC/VcgE (DUF2780) 12 152 2.7E-32 T 12-10-2018 IPR021302 Protein of unknown function DUF2780, VcgC/VcgE M892_08915 ac954462e959bd22dd51b4211116f374 234 Gene3D G3DSA:3.40.50.300 1 233 6.3E-60 T 12-10-2018 M892_08915 ac954462e959bd22dd51b4211116f374 234 SUPERFAMILY SSF52540 1 230 7.66E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_08915 ac954462e959bd22dd51b4211116f374 234 TIGRFAM TIGR01277 thiQ: thiamine ABC transporter, ATP-binding protein 2 211 6.8E-101 T 12-10-2018 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ GO:0005524|GO:0016021|GO:0042626|GO:0071934 M892_08915 ac954462e959bd22dd51b4211116f374 234 SMART SM00382 24 209 2.2E-18 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_08915 ac954462e959bd22dd51b4211116f374 234 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_08915 ac954462e959bd22dd51b4211116f374 234 Pfam PF00005 ABC transporter 18 157 8.6E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_05955 69bf009f892eaabaa730e68b1d531fff 426 Pfam PF07724 AAA domain (Cdc48 subfamily) 114 312 1.2E-48 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 M892_05955 69bf009f892eaabaa730e68b1d531fff 426 SMART SM00382 113 266 2.0E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_05955 69bf009f892eaabaa730e68b1d531fff 426 SMART SM00994 13 52 1.0E-24 T 12-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 M892_05955 69bf009f892eaabaa730e68b1d531fff 426 SUPERFAMILY SSF57716 14 49 5.84E-12 T 12-10-2018 M892_05955 69bf009f892eaabaa730e68b1d531fff 426 SMART SM01086 319 414 5.9E-34 T 12-10-2018 IPR019489 Clp ATPase, C-terminal M892_05955 69bf009f892eaabaa730e68b1d531fff 426 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 12 414 3.8E-209 T 12-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 M892_05955 69bf009f892eaabaa730e68b1d531fff 426 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 5 417 53.304 T 12-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 M892_05955 69bf009f892eaabaa730e68b1d531fff 426 Gene3D G3DSA:1.10.8.60 318 426 2.6E-41 T 12-10-2018 M892_05955 69bf009f892eaabaa730e68b1d531fff 426 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 319 396 8.1E-16 T 12-10-2018 IPR019489 Clp ATPase, C-terminal M892_05955 69bf009f892eaabaa730e68b1d531fff 426 Gene3D G3DSA:3.30.50.30 2 53 1.4E-26 T 12-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily M892_05955 69bf009f892eaabaa730e68b1d531fff 426 SUPERFAMILY SSF52540 63 404 8.01E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_05955 69bf009f892eaabaa730e68b1d531fff 426 Gene3D G3DSA:3.40.50.300 59 317 1.0E-108 T 12-10-2018 M892_05955 69bf009f892eaabaa730e68b1d531fff 426 Pfam PF06689 ClpX C4-type zinc finger 14 51 1.2E-20 T 12-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 M892_14130 2b6709b74505cee105c12bcd5778fc8c 710 SUPERFAMILY SSF55666 146 236 1.02E-28 T 12-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 M892_14130 2b6709b74505cee105c12bcd5778fc8c 710 Pfam PF00575 S1 RNA binding domain 620 691 2.0E-18 T 12-10-2018 IPR003029 S1 domain GO:0003676 M892_14130 2b6709b74505cee105c12bcd5778fc8c 710 SUPERFAMILY SSF50249 608 695 3.17E-21 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M892_14130 2b6709b74505cee105c12bcd5778fc8c 710 Gene3D G3DSA:3.30.1370.10 551 622 1.5E-18 T 12-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 M892_14130 2b6709b74505cee105c12bcd5778fc8c 710 SUPERFAMILY SSF54211 299 493 3.85E-46 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold M892_14130 2b6709b74505cee105c12bcd5778fc8c 710 SUPERFAMILY SSF46915 240 321 3.66E-19 T 12-10-2018 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 M892_14130 2b6709b74505cee105c12bcd5778fc8c 710 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 11 692 0.0 T 12-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 M892_14130 2b6709b74505cee105c12bcd5778fc8c 710 SMART SM00316 621 691 3.3E-25 T 12-10-2018 IPR022967 RNA-binding domain, S1 M892_14130 2b6709b74505cee105c12bcd5778fc8c 710 Gene3D G3DSA:3.30.230.70 234 550 4.9E-114 T 12-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 M892_14130 2b6709b74505cee105c12bcd5778fc8c 710 Pfam PF00013 KH domain 557 615 1.6E-8 T 12-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 M892_14130 2b6709b74505cee105c12bcd5778fc8c 710 PIRSF PIRSF005499 2 710 7.6E-298 T 12-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 M892_14130 2b6709b74505cee105c12bcd5778fc8c 710 SUPERFAMILY SSF55666 451 550 9.68E-28 T 12-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 M892_14130 2b6709b74505cee105c12bcd5778fc8c 710 SUPERFAMILY SSF54211 5 145 4.1E-48 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold M892_14130 2b6709b74505cee105c12bcd5778fc8c 710 Gene3D G3DSA:3.30.230.70 2 229 2.5E-77 T 12-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 M892_14130 2b6709b74505cee105c12bcd5778fc8c 710 Pfam PF03725 3' exoribonuclease family, domain 2 148 211 7.6E-13 T 12-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 M892_14130 2b6709b74505cee105c12bcd5778fc8c 710 Gene3D G3DSA:2.40.50.140 623 694 1.7E-29 T 12-10-2018 M892_14130 2b6709b74505cee105c12bcd5778fc8c 710 Pfam PF01138 3' exoribonuclease family, domain 1 17 145 3.8E-18 T 12-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 M892_14130 2b6709b74505cee105c12bcd5778fc8c 710 Pfam PF01138 3' exoribonuclease family, domain 1 325 457 4.8E-20 T 12-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 M892_14130 2b6709b74505cee105c12bcd5778fc8c 710 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 243 321 1.6E-23 T 12-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 M892_14130 2b6709b74505cee105c12bcd5778fc8c 710 SUPERFAMILY SSF54791 553 630 1.06E-15 T 12-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 M892_14130 2b6709b74505cee105c12bcd5778fc8c 710 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 4 694 30.142 T 12-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 M892_14130 2b6709b74505cee105c12bcd5778fc8c 710 SMART SM00322 553 618 3.6E-11 T 12-10-2018 IPR004087 K Homology domain GO:0003676 M892_08000 95b6755f9f5824a04599c0f55537c5be 168 ProSitePatterns PS00855 Signal peptidases II signature. 109 121 - T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 M892_08000 95b6755f9f5824a04599c0f55537c5be 168 Pfam PF01252 Signal peptidase (SPase) II 19 161 7.8E-38 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 M892_08000 95b6755f9f5824a04599c0f55537c5be 168 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 10 167 16.711 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 M892_08000 95b6755f9f5824a04599c0f55537c5be 168 TIGRFAM TIGR00077 lspA: signal peptidase II 10 166 1.3E-48 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 M892_08000 95b6755f9f5824a04599c0f55537c5be 168 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 106 121 3.0E-18 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 M892_08000 95b6755f9f5824a04599c0f55537c5be 168 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 58 66 3.0E-18 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 M892_08000 95b6755f9f5824a04599c0f55537c5be 168 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 142 158 3.0E-18 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 M892_09190 b0d364e468acde3e90694ae9e23c8932 232 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 1.5E-40 T 12-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_09190 b0d364e468acde3e90694ae9e23c8932 232 Pfam PF07650 KH domain 38 111 6.7E-19 T 12-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_09190 b0d364e468acde3e90694ae9e23c8932 232 SMART SM00322 60 125 7.7E-8 T 12-10-2018 IPR004087 K Homology domain GO:0003676 M892_09190 b0d364e468acde3e90694ae9e23c8932 232 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 4.2E-97 T 12-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 M892_09190 b0d364e468acde3e90694ae9e23c8932 232 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 38.593 T 12-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 M892_09190 b0d364e468acde3e90694ae9e23c8932 232 Gene3D G3DSA:3.30.1140.32 108 208 3.6E-44 T 12-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_09190 b0d364e468acde3e90694ae9e23c8932 232 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 12-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_09190 b0d364e468acde3e90694ae9e23c8932 232 SUPERFAMILY SSF54814 2 106 1.57E-36 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 M892_09190 b0d364e468acde3e90694ae9e23c8932 232 SUPERFAMILY SSF54821 108 206 1.57E-39 T 12-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_09190 b0d364e468acde3e90694ae9e23c8932 232 Gene3D G3DSA:3.30.300.20 17 107 3.7E-29 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta M892_23045 7b4d73593ac371f560620dfe7e3541b0 225 SUPERFAMILY SSF50630 88 219 4.5E-40 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily M892_23045 7b4d73593ac371f560620dfe7e3541b0 225 Pfam PF05618 Putative ATP-dependant zinc protease 88 222 2.6E-41 T 12-10-2018 M892_23045 7b4d73593ac371f560620dfe7e3541b0 225 Gene3D G3DSA:2.40.70.10 86 212 1.1E-37 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily M892_11760 0293f97d004169fa7f0ed237475d0f43 149 Pfam PF01220 Dehydroquinase class II 6 142 3.2E-62 T 12-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 M892_11760 0293f97d004169fa7f0ed237475d0f43 149 SUPERFAMILY SSF52304 4 145 6.41E-62 T 12-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 M892_11760 0293f97d004169fa7f0ed237475d0f43 149 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 6 145 2.3E-64 T 12-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 M892_11760 0293f97d004169fa7f0ed237475d0f43 149 ProSitePatterns PS01029 Dehydroquinase class II signature. 10 27 - T 12-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 M892_11760 0293f97d004169fa7f0ed237475d0f43 149 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 21 149 2.0E-69 T 12-10-2018 M892_11760 0293f97d004169fa7f0ed237475d0f43 149 PIRSF PIRSF001399 3 149 7.2E-60 T 12-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 M892_11760 0293f97d004169fa7f0ed237475d0f43 149 Gene3D G3DSA:3.40.50.9100 1 149 9.4E-67 T 12-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 M892_11760 0293f97d004169fa7f0ed237475d0f43 149 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 149 74.864 T 12-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 M892_06375 e72ef5417e8286e8e943c1f81a072231 321 Pfam PF00762 Ferrochelatase 7 320 6.5E-111 T 12-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 M892_06375 e72ef5417e8286e8e943c1f81a072231 321 Hamap MF_00323 Ferrochelatase [hemH]. 6 321 38.974 T 12-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 M892_06375 e72ef5417e8286e8e943c1f81a072231 321 Gene3D G3DSA:3.40.50.1400 164 302 2.0E-94 T 12-10-2018 M892_06375 e72ef5417e8286e8e943c1f81a072231 321 ProSitePatterns PS00534 Ferrochelatase signature. 190 208 - T 12-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 M892_06375 e72ef5417e8286e8e943c1f81a072231 321 Gene3D G3DSA:3.40.50.1400 9 321 2.0E-94 T 12-10-2018 M892_06375 e72ef5417e8286e8e943c1f81a072231 321 TIGRFAM TIGR00109 hemH: ferrochelatase 5 321 5.1E-106 T 12-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 M892_06375 e72ef5417e8286e8e943c1f81a072231 321 SUPERFAMILY SSF53800 5 320 1.31E-104 T 12-10-2018 M892_08105 3efff5730a97cf901cb420f553fc4ede 510 Pfam PF00152 tRNA synthetases class II (D, K and N) 161 506 5.1E-80 T 12-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 M892_08105 3efff5730a97cf901cb420f553fc4ede 510 Gene3D G3DSA:2.40.50.140 10 156 1.5E-28 T 12-10-2018 M892_08105 3efff5730a97cf901cb420f553fc4ede 510 SUPERFAMILY SSF50249 16 154 3.67E-33 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M892_08105 3efff5730a97cf901cb420f553fc4ede 510 SUPERFAMILY SSF55681 161 507 7.37E-117 T 12-10-2018 M892_08105 3efff5730a97cf901cb420f553fc4ede 510 Pfam PF01336 OB-fold nucleic acid binding domain 73 145 1.1E-7 T 12-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 M892_08105 3efff5730a97cf901cb420f553fc4ede 510 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 24 509 43.035 T 12-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 M892_08105 3efff5730a97cf901cb420f553fc4ede 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 391 407 1.2E-37 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 M892_08105 3efff5730a97cf901cb420f553fc4ede 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 243 256 1.2E-37 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 M892_08105 3efff5730a97cf901cb420f553fc4ede 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 198 208 1.2E-37 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 M892_08105 3efff5730a97cf901cb420f553fc4ede 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 214 230 1.2E-37 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 M892_08105 3efff5730a97cf901cb420f553fc4ede 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 261 278 1.2E-37 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 M892_08105 3efff5730a97cf901cb420f553fc4ede 510 Gene3D G3DSA:3.30.930.10 157 510 1.5E-129 T 12-10-2018 M892_08105 3efff5730a97cf901cb420f553fc4ede 510 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 19 509 2.7E-199 T 12-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 M892_28635 fff6a47a0a8dfff0a55ff71991abba85 86 SUPERFAMILY SSF143120 1 75 8.24E-16 T 12-10-2018 IPR036165 YefM-like superfamily M892_28635 fff6a47a0a8dfff0a55ff71991abba85 86 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 56 6.0E-13 T 12-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM M892_28635 fff6a47a0a8dfff0a55ff71991abba85 86 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 3 49 1.1E-13 T 12-10-2018 M892_28635 fff6a47a0a8dfff0a55ff71991abba85 86 Gene3D G3DSA:3.40.1620.10 5 49 3.6E-7 T 12-10-2018 M892_18485 f793aa6095420ab296a8d76c8251ebf1 306 Pfam PF13737 Transposase DDE domain 19 129 6.8E-45 T 12-10-2018 IPR025668 Transposase DDE domain M892_23260 cc8a6fdc809cf82b8a62c902e6292e6e 564 PIRSF PIRSF000101 1 562 4.9E-289 T 12-10-2018 IPR012256 D-lactate dehydrogenase GO:0005887|GO:0016901|GO:0019516|GO:0022904|GO:0050660 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 M892_23260 cc8a6fdc809cf82b8a62c902e6292e6e 564 Pfam PF01565 FAD binding domain 41 178 8.3E-10 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 M892_23260 cc8a6fdc809cf82b8a62c902e6292e6e 564 Gene3D G3DSA:3.30.1370.20 427 511 1.1E-38 T 12-10-2018 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 M892_23260 cc8a6fdc809cf82b8a62c902e6292e6e 564 Gene3D G3DSA:3.30.465.10 100 259 4.7E-68 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 M892_23260 cc8a6fdc809cf82b8a62c902e6292e6e 564 Gene3D G3DSA:3.30.43.10 1 96 9.7E-12 T 12-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 M892_23260 cc8a6fdc809cf82b8a62c902e6292e6e 564 SUPERFAMILY SSF55103 267 557 5.23E-105 T 12-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 M892_23260 cc8a6fdc809cf82b8a62c902e6292e6e 564 Pfam PF09330 D-lactate dehydrogenase, membrane binding 269 557 5.7E-135 T 12-10-2018 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 M892_23260 cc8a6fdc809cf82b8a62c902e6292e6e 564 Hamap MF_02092 Quinone-dependent D-lactate dehydrogenase [dld]. 4 560 53.795 T 12-10-2018 IPR012256 D-lactate dehydrogenase GO:0005887|GO:0016901|GO:0019516|GO:0022904|GO:0050660 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 M892_23260 cc8a6fdc809cf82b8a62c902e6292e6e 564 SUPERFAMILY SSF56176 4 264 3.33E-65 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 M892_23260 cc8a6fdc809cf82b8a62c902e6292e6e 564 Gene3D G3DSA:3.30.70.610 364 426 2.0E-17 T 12-10-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 M892_23260 cc8a6fdc809cf82b8a62c902e6292e6e 564 Gene3D G3DSA:3.30.70.610 260 333 9.5E-17 T 12-10-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 M892_24790 67ba812008ff5dd0b51c65e641e232c7 218 Gene3D G3DSA:3.90.870.10 6 218 9.6E-88 T 12-10-2018 M892_24790 67ba812008ff5dd0b51c65e641e232c7 218 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 12 214 42.368 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 M892_24790 67ba812008ff5dd0b51c65e641e232c7 218 SUPERFAMILY SSF55821 10 213 2.17E-81 T 12-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily M892_24790 67ba812008ff5dd0b51c65e641e232c7 218 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 14 210 4.6E-76 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 M892_24790 67ba812008ff5dd0b51c65e641e232c7 218 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 18 209 2.2E-78 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 M892_27245 393fab231e5f18b21492afb403db0b75 418 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 255 410 1.3E-38 T 12-10-2018 IPR031475 Four-carbon acid sugar kinase, C-terminal domain M892_27245 393fab231e5f18b21492afb403db0b75 418 Gene3D G3DSA:3.40.50.10840 2 235 1.5E-86 T 12-10-2018 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily M892_27245 393fab231e5f18b21492afb403db0b75 418 SUPERFAMILY SSF142764 3 417 2.22E-130 T 12-10-2018 M892_27245 393fab231e5f18b21492afb403db0b75 418 Pfam PF07005 Putative sugar-binding N-terminal domain 3 227 7.9E-68 T 12-10-2018 IPR010737 Four-carbon acid sugar kinase, N-terminal domain M892_27245 393fab231e5f18b21492afb403db0b75 418 Gene3D G3DSA:3.40.980.20 241 418 1.7E-62 T 12-10-2018 M892_25330 d60e25807afaaa5f8f805779f5218278 205 SUPERFAMILY SSF47616 83 199 8.35E-20 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily M892_25330 d60e25807afaaa5f8f805779f5218278 205 Gene3D G3DSA:3.40.30.10 1 83 1.2E-34 T 12-10-2018 M892_25330 d60e25807afaaa5f8f805779f5218278 205 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 73 8.9E-18 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 M892_25330 d60e25807afaaa5f8f805779f5218278 205 Pfam PF14497 Glutathione S-transferase, C-terminal domain 120 194 9.5E-8 T 12-10-2018 IPR004046 Glutathione S-transferase, C-terminal M892_25330 d60e25807afaaa5f8f805779f5218278 205 SUPERFAMILY SSF52833 1 77 7.09E-21 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M892_25330 d60e25807afaaa5f8f805779f5218278 205 Gene3D G3DSA:1.20.1050.10 84 198 1.2E-33 T 12-10-2018 M892_20065 09e8440720efc6752d211ccb0d78cd1e 75 Gene3D G3DSA:3.40.430.10 1 73 8.4E-16 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 M892_20065 09e8440720efc6752d211ccb0d78cd1e 75 SUPERFAMILY SSF53597 1 73 1.83E-12 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 M892_20065 09e8440720efc6752d211ccb0d78cd1e 75 Pfam PF01872 RibD C-terminal domain 1 62 2.8E-8 T 12-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 M892_21255 bca988ab4dd6b3006d9e9cc5c5739d5f 292 Gene3D G3DSA:3.40.50.2300 125 259 2.9E-98 T 12-10-2018 M892_21255 bca988ab4dd6b3006d9e9cc5c5739d5f 292 SUPERFAMILY SSF53822 6 292 1.66E-88 T 12-10-2018 IPR028082 Periplasmic binding protein-like I M892_21255 bca988ab4dd6b3006d9e9cc5c5739d5f 292 Pfam PF13407 Periplasmic binding protein domain 28 278 8.9E-61 T 12-10-2018 IPR025997 Periplasmic binding protein M892_21255 bca988ab4dd6b3006d9e9cc5c5739d5f 292 Gene3D G3DSA:3.40.50.2300 29 278 2.9E-98 T 12-10-2018 M892_20850 69b4f2b801212c4091717515c57ee2ea 233 Pfam PF00175 Oxidoreductase NAD-binding domain 108 211 1.5E-14 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 M892_20850 69b4f2b801212c4091717515c57ee2ea 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 107 126 3.0E-13 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 M892_20850 69b4f2b801212c4091717515c57ee2ea 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 28 40 3.0E-13 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 M892_20850 69b4f2b801212c4091717515c57ee2ea 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 132 141 3.0E-13 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 M892_20850 69b4f2b801212c4091717515c57ee2ea 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 197 205 3.0E-13 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 M892_20850 69b4f2b801212c4091717515c57ee2ea 233 SUPERFAMILY SSF52343 100 231 1.83E-31 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain M892_20850 69b4f2b801212c4091717515c57ee2ea 233 SUPERFAMILY SSF63380 3 97 1.4E-12 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel M892_20850 69b4f2b801212c4091717515c57ee2ea 233 Gene3D G3DSA:2.40.30.10 1 98 6.5E-17 T 12-10-2018 M892_20850 69b4f2b801212c4091717515c57ee2ea 233 Gene3D G3DSA:3.40.50.80 99 233 4.8E-25 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain M892_10635 07f25c5dd65b0e9fc890bacdbf93b8b7 467 SUPERFAMILY SSF50615 1 75 2.17E-25 T 12-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M892_10635 07f25c5dd65b0e9fc890bacdbf93b8b7 467 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 130 349 2.2E-60 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M892_10635 07f25c5dd65b0e9fc890bacdbf93b8b7 467 Gene3D G3DSA:2.40.10.170 2 75 5.5E-30 T 12-10-2018 M892_10635 07f25c5dd65b0e9fc890bacdbf93b8b7 467 SUPERFAMILY SSF47917 352 466 7.06E-51 T 12-10-2018 M892_10635 07f25c5dd65b0e9fc890bacdbf93b8b7 467 Gene3D G3DSA:1.10.1140.10 352 467 5.7E-54 T 12-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M892_10635 07f25c5dd65b0e9fc890bacdbf93b8b7 467 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 467 3.7E-249 T 12-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 M892_10635 07f25c5dd65b0e9fc890bacdbf93b8b7 467 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 340 349 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M892_10635 07f25c5dd65b0e9fc890bacdbf93b8b7 467 SUPERFAMILY SSF52540 77 355 4.41E-85 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_10635 07f25c5dd65b0e9fc890bacdbf93b8b7 467 SMART SM00382 142 334 5.7E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_10635 07f25c5dd65b0e9fc890bacdbf93b8b7 467 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 73 1.2E-20 T 12-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M892_10635 07f25c5dd65b0e9fc890bacdbf93b8b7 467 Gene3D G3DSA:3.40.50.300 76 351 7.2E-111 T 12-10-2018 M892_10635 07f25c5dd65b0e9fc890bacdbf93b8b7 467 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 467 56.028 T 12-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 M892_20395 6c830c6e023dd3b9056f666e95651324 148 Gene3D G3DSA:3.20.20.10 54 148 2.7E-38 T 12-10-2018 IPR029066 PLP-binding barrel M892_20395 6c830c6e023dd3b9056f666e95651324 148 SUPERFAMILY SSF51419 52 148 1.48E-11 T 12-10-2018 IPR029066 PLP-binding barrel M892_20395 6c830c6e023dd3b9056f666e95651324 148 Gene3D G3DSA:2.40.37.20 38 53 2.7E-38 T 12-10-2018 M892_10250 d78a13aaad89ab5be38be7e975607d00 109 SUPERFAMILY SSF103481 12 107 8.11E-16 T 12-10-2018 M892_10250 d78a13aaad89ab5be38be7e975607d00 109 Pfam PF00893 Small Multidrug Resistance protein 9 99 1.0E-19 T 12-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 M892_10250 d78a13aaad89ab5be38be7e975607d00 109 Gene3D G3DSA:1.10.3730.20 7 109 7.9E-22 T 12-10-2018 M892_16360 07ddab4096b78b11536b357653326ed6 519 SUPERFAMILY SSF52091 416 498 2.16E-11 T 12-10-2018 IPR036513 STAS domain superfamily M892_16360 07ddab4096b78b11536b357653326ed6 519 Pfam PF01740 STAS domain 417 503 4.4E-5 T 12-10-2018 IPR002645 STAS domain M892_16360 07ddab4096b78b11536b357653326ed6 519 Gene3D G3DSA:3.30.750.24 409 499 4.3E-26 T 12-10-2018 IPR036513 STAS domain superfamily M892_16360 07ddab4096b78b11536b357653326ed6 519 Pfam PF00916 Sulfate permease family 13 374 1.3E-56 T 12-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 M892_10095 626fb9e9d12d8ca0dc9a02290a1a38c2 85 SUPERFAMILY SSF47345 3 85 1.57E-33 T 12-10-2018 IPR035900 Colicin E immunity protein superfamily M892_10095 626fb9e9d12d8ca0dc9a02290a1a38c2 85 Gene3D G3DSA:1.10.1200.20 2 85 1.1E-34 T 12-10-2018 IPR035900 Colicin E immunity protein superfamily M892_10095 626fb9e9d12d8ca0dc9a02290a1a38c2 85 PRINTS PR01299 Colicin E2 (pyocin) immunity protein signature 63 84 3.2E-24 T 12-10-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 M892_10095 626fb9e9d12d8ca0dc9a02290a1a38c2 85 PRINTS PR01299 Colicin E2 (pyocin) immunity protein signature 40 56 3.2E-24 T 12-10-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 M892_10095 626fb9e9d12d8ca0dc9a02290a1a38c2 85 PRINTS PR01299 Colicin E2 (pyocin) immunity protein signature 3 21 3.2E-24 T 12-10-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 M892_10095 626fb9e9d12d8ca0dc9a02290a1a38c2 85 ProDom PD007225 IMMUNITY COLICIN BACTERIOCIN PLASMID PROTEIN/PYOCIN ORFU3 ORFU1 PYOCIN 3D-STRUCTURE GENES 8 84 4.0E-18 T 12-10-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 M892_10095 626fb9e9d12d8ca0dc9a02290a1a38c2 85 Pfam PF01320 Colicin immunity protein / pyocin immunity protein 3 84 6.3E-31 T 12-10-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 M892_13130 6294176e6e5a602f21777ff9842715e2 478 SUPERFAMILY SSF53720 18 475 2.09E-153 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 M892_13130 6294176e6e5a602f21777ff9842715e2 478 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 250 257 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 M892_13130 6294176e6e5a602f21777ff9842715e2 478 Pfam PF00171 Aldehyde dehydrogenase family 20 471 8.2E-159 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 M892_13130 6294176e6e5a602f21777ff9842715e2 478 Gene3D G3DSA:3.40.309.10 257 444 4.6E-166 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 M892_13130 6294176e6e5a602f21777ff9842715e2 478 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 278 289 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 M892_13130 6294176e6e5a602f21777ff9842715e2 478 Gene3D G3DSA:3.40.605.10 19 467 4.6E-166 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 M892_13130 6294176e6e5a602f21777ff9842715e2 478 PIRSF PIRSF036492 26 475 8.2E-84 T 12-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 M892_25085 e82b17008bec59e59c9442cace1917ec 229 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 151 227 2.8E-22 T 12-10-2018 IPR006260 TonB/TolA, C-terminal M892_25085 e82b17008bec59e59c9442cace1917ec 229 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 150 227 1.4E-22 T 12-10-2018 IPR037682 TonB, C-terminal GO:0055085 M892_25085 e82b17008bec59e59c9442cace1917ec 229 PRINTS PR01374 Gram-negative bacterial tonB protein signature 58 68 1.2E-5 T 12-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 M892_25085 e82b17008bec59e59c9442cace1917ec 229 PRINTS PR01374 Gram-negative bacterial tonB protein signature 145 166 1.2E-5 T 12-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 M892_25085 e82b17008bec59e59c9442cace1917ec 229 SUPERFAMILY SSF74653 148 225 1.7E-21 T 12-10-2018 M892_25085 e82b17008bec59e59c9442cace1917ec 229 Gene3D G3DSA:3.30.1150.10 125 228 5.3E-22 T 12-10-2018 M892_17000 fb1ef43a4b77ced1f3a75f978bc532cf 814 SUPERFAMILY SSF141868 420 657 3.27E-65 T 12-10-2018 IPR035919 EAL domain superfamily M892_17000 fb1ef43a4b77ced1f3a75f978bc532cf 814 SMART SM00052 413 659 7.0E-55 T 12-10-2018 IPR001633 EAL domain M892_17000 fb1ef43a4b77ced1f3a75f978bc532cf 814 Gene3D G3DSA:3.30.450.20 120 271 3.2E-16 T 12-10-2018 M892_17000 fb1ef43a4b77ced1f3a75f978bc532cf 814 Gene3D G3DSA:3.10.580.10 684 812 3.7E-7 T 12-10-2018 M892_17000 fb1ef43a4b77ced1f3a75f978bc532cf 814 Gene3D G3DSA:3.20.20.450 401 661 1.1E-70 T 12-10-2018 IPR035919 EAL domain superfamily M892_17000 fb1ef43a4b77ced1f3a75f978bc532cf 814 SMART SM00091 124 190 3.3E-6 T 12-10-2018 IPR000014 PAS domain M892_17000 fb1ef43a4b77ced1f3a75f978bc532cf 814 SUPERFAMILY SSF54631 688 812 4.8E-9 T 12-10-2018 M892_17000 fb1ef43a4b77ced1f3a75f978bc532cf 814 SUPERFAMILY SSF55785 122 235 5.06E-15 T 12-10-2018 IPR035965 PAS domain superfamily M892_17000 fb1ef43a4b77ced1f3a75f978bc532cf 814 Pfam PF00563 EAL domain 421 653 4.2E-63 T 12-10-2018 IPR001633 EAL domain M892_17000 fb1ef43a4b77ced1f3a75f978bc532cf 814 Pfam PF00571 CBS domain 757 812 0.0056 T 12-10-2018 IPR000644 CBS domain M892_17000 fb1ef43a4b77ced1f3a75f978bc532cf 814 Pfam PF13426 PAS domain 135 235 3.0E-7 T 12-10-2018 IPR000014 PAS domain M892_17000 fb1ef43a4b77ced1f3a75f978bc532cf 814 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 124 236 4.0E-11 T 12-10-2018 IPR000014 PAS domain M892_22225 863605996f11fceb7d8d2af043eb7b27 339 Pfam PF03741 Integral membrane protein TerC family 92 293 2.5E-54 T 12-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 M892_22225 863605996f11fceb7d8d2af043eb7b27 339 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 20 325 6.8E-106 T 12-10-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 M892_08450 dfa9c8d71af8606176755e3dc7fb2be0 159 SUPERFAMILY SSF101738 4 118 1.7E-49 T 12-10-2018 IPR036760 SspB-like superfamily M892_08450 dfa9c8d71af8606176755e3dc7fb2be0 159 Gene3D G3DSA:2.30.30.220 3 132 1.1E-52 T 12-10-2018 IPR036760 SspB-like superfamily M892_08450 dfa9c8d71af8606176755e3dc7fb2be0 159 PIRSF PIRSF005276 3 159 1.8E-63 T 12-10-2018 IPR007481 Stringent starvation protein B M892_08450 dfa9c8d71af8606176755e3dc7fb2be0 159 Pfam PF04386 Stringent starvation protein B 9 159 9.1E-43 T 12-10-2018 IPR007481 Stringent starvation protein B M892_15980 c87e0edab12dddcd2e6e122c84d33b58 278 Pfam PF12697 Alpha/beta hydrolase family 40 258 9.9E-10 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 M892_15980 c87e0edab12dddcd2e6e122c84d33b58 278 SUPERFAMILY SSF53474 10 261 2.76E-32 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_15980 c87e0edab12dddcd2e6e122c84d33b58 278 Gene3D G3DSA:3.40.50.1820 6 268 2.8E-30 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_24360 f5ee155cecddcdc52440a78aaadf71f0 237 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_24360 f5ee155cecddcdc52440a78aaadf71f0 237 Pfam PF00005 ABC transporter 24 172 1.1E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_24360 f5ee155cecddcdc52440a78aaadf71f0 237 Gene3D G3DSA:3.40.50.300 1 236 1.0E-71 T 12-10-2018 M892_24360 f5ee155cecddcdc52440a78aaadf71f0 237 SMART SM00382 32 220 2.1E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_24360 f5ee155cecddcdc52440a78aaadf71f0 237 SUPERFAMILY SSF52540 3 224 1.24E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_15095 871365bb93e4d1b85545e2008d52698d 120 Gene3D G3DSA:3.40.30.10 3 120 7.5E-47 T 12-10-2018 M892_15095 871365bb93e4d1b85545e2008d52698d 120 Pfam PF03960 ArsC family 10 119 6.2E-18 T 12-10-2018 IPR006660 Arsenate reductase-like M892_15095 871365bb93e4d1b85545e2008d52698d 120 SUPERFAMILY SSF52833 6 120 2.18E-34 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M892_15095 871365bb93e4d1b85545e2008d52698d 120 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 7 120 2.5E-46 T 12-10-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 M892_21075 55f68178fa71489bef1c25390515d06c 216 PRINTS PR01021 OMPA domain signature 136 151 7.6E-13 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M892_21075 55f68178fa71489bef1c25390515d06c 216 PRINTS PR01021 OMPA domain signature 107 129 7.6E-13 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M892_21075 55f68178fa71489bef1c25390515d06c 216 PRINTS PR01021 OMPA domain signature 151 167 7.6E-13 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M892_21075 55f68178fa71489bef1c25390515d06c 216 Pfam PF00691 OmpA family 107 200 3.4E-20 T 12-10-2018 IPR006665 OmpA-like domain M892_21075 55f68178fa71489bef1c25390515d06c 216 SUPERFAMILY SSF103088 101 206 5.23E-29 T 12-10-2018 IPR036737 OmpA-like domain superfamily M892_21075 55f68178fa71489bef1c25390515d06c 216 Gene3D G3DSA:3.30.1330.60 81 208 8.7E-33 T 12-10-2018 IPR036737 OmpA-like domain superfamily M892_07520 ce0273fc14cf45885ab3310dbc2d7fb5 566 SUPERFAMILY SSF53955 87 350 1.29E-53 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily M892_07520 ce0273fc14cf45885ab3310dbc2d7fb5 566 Gene3D G3DSA:3.30.20.10 178 248 7.5E-77 T 12-10-2018 M892_07520 ce0273fc14cf45885ab3310dbc2d7fb5 566 Pfam PF00182 Chitinase class I 106 325 1.4E-30 T 12-10-2018 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 M892_07520 ce0273fc14cf45885ab3310dbc2d7fb5 566 Gene3D G3DSA:1.10.530.10 105 346 7.5E-77 T 12-10-2018 M892_07520 ce0273fc14cf45885ab3310dbc2d7fb5 566 Gene3D G3DSA:2.10.10.20 434 480 1.6E-15 T 12-10-2018 M892_07520 ce0273fc14cf45885ab3310dbc2d7fb5 566 SMART SM00495 518 563 0.63 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 M892_07520 ce0273fc14cf45885ab3310dbc2d7fb5 566 SMART SM00495 436 478 9.9E-18 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 M892_07520 ce0273fc14cf45885ab3310dbc2d7fb5 566 SUPERFAMILY SSF51055 430 479 8.37E-17 T 12-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 M892_10775 5761548aaf93220e76a038267ee79d0b 427 Pfam PF01189 16S rRNA methyltransferase RsmB/F 238 422 2.5E-69 T 12-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 M892_10775 5761548aaf93220e76a038267ee79d0b 427 SUPERFAMILY SSF48013 1 146 1.15E-36 T 12-10-2018 IPR035926 NusB-like superfamily M892_10775 5761548aaf93220e76a038267ee79d0b 427 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 4 425 2.0E-154 T 12-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 M892_10775 5761548aaf93220e76a038267ee79d0b 427 Gene3D G3DSA:1.10.287.730 143 169 2.1E-14 T 12-10-2018 M892_10775 5761548aaf93220e76a038267ee79d0b 427 Gene3D G3DSA:1.10.940.10 1 142 5.8E-45 T 12-10-2018 IPR035926 NusB-like superfamily M892_10775 5761548aaf93220e76a038267ee79d0b 427 Gene3D G3DSA:3.30.70.1170 170 227 1.2E-26 T 12-10-2018 M892_10775 5761548aaf93220e76a038267ee79d0b 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 248 258 1.1E-30 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase M892_10775 5761548aaf93220e76a038267ee79d0b 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 407 424 1.1E-30 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase M892_10775 5761548aaf93220e76a038267ee79d0b 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 314 326 1.1E-30 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase M892_10775 5761548aaf93220e76a038267ee79d0b 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 219 233 1.1E-30 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase M892_10775 5761548aaf93220e76a038267ee79d0b 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 364 380 1.1E-30 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase M892_10775 5761548aaf93220e76a038267ee79d0b 427 Pfam PF01029 NusB family 1 123 1.3E-24 T 12-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 M892_10775 5761548aaf93220e76a038267ee79d0b 427 SUPERFAMILY SSF53335 139 425 7.45E-79 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M892_10775 5761548aaf93220e76a038267ee79d0b 427 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 313 324 - T 12-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 M892_10775 5761548aaf93220e76a038267ee79d0b 427 Gene3D G3DSA:3.40.50.150 228 425 1.4E-70 T 12-10-2018 M892_00195 1663eca84edb9fab15c70a3c68c38066 578 Pfam PF00149 Calcineurin-like phosphoesterase 46 271 5.9E-15 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 M892_00195 1663eca84edb9fab15c70a3c68c38066 578 Pfam PF02872 5'-nucleotidase, C-terminal domain 379 526 5.1E-30 T 12-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M892_00195 1663eca84edb9fab15c70a3c68c38066 578 Gene3D G3DSA:3.60.21.10 40 375 2.5E-107 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like M892_00195 1663eca84edb9fab15c70a3c68c38066 578 SUPERFAMILY SSF56300 41 374 3.35E-88 T 12-10-2018 M892_00195 1663eca84edb9fab15c70a3c68c38066 578 Gene3D G3DSA:3.90.780.10 376 560 4.6E-45 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M892_00195 1663eca84edb9fab15c70a3c68c38066 578 SUPERFAMILY SSF55816 377 555 9.94E-42 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M892_00195 1663eca84edb9fab15c70a3c68c38066 578 ProSitePatterns PS00786 5'-nucleotidase signature 2. 121 132 - T 12-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M892_00195 1663eca84edb9fab15c70a3c68c38066 578 PRINTS PR01607 Apyrase family signature 224 241 6.5E-44 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M892_00195 1663eca84edb9fab15c70a3c68c38066 578 PRINTS PR01607 Apyrase family signature 432 455 6.5E-44 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M892_00195 1663eca84edb9fab15c70a3c68c38066 578 PRINTS PR01607 Apyrase family signature 501 520 6.5E-44 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M892_00195 1663eca84edb9fab15c70a3c68c38066 578 PRINTS PR01607 Apyrase family signature 44 62 6.5E-44 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M892_00195 1663eca84edb9fab15c70a3c68c38066 578 PRINTS PR01607 Apyrase family signature 255 278 6.5E-44 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M892_00195 1663eca84edb9fab15c70a3c68c38066 578 PRINTS PR01607 Apyrase family signature 300 320 6.5E-44 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M892_22500 e174f0f2735a05dd45bdaf81eec774c9 39 Pfam PF00990 Diguanylate cyclase, GGDEF domain 2 38 1.3E-4 T 12-10-2018 IPR000160 GGDEF domain M892_22500 e174f0f2735a05dd45bdaf81eec774c9 39 Gene3D G3DSA:3.30.70.270 1 39 9.9E-6 T 12-10-2018 M892_12225 9385bf255532b07167f2d7262f3586f1 485 Gene3D G3DSA:3.40.605.10 7 448 3.4E-140 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 M892_12225 9385bf255532b07167f2d7262f3586f1 485 Pfam PF00171 Aldehyde dehydrogenase family 9 458 4.7E-121 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 M892_12225 9385bf255532b07167f2d7262f3586f1 485 Gene3D G3DSA:3.40.309.10 247 436 3.4E-140 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 M892_12225 9385bf255532b07167f2d7262f3586f1 485 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 242 249 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 M892_12225 9385bf255532b07167f2d7262f3586f1 485 SUPERFAMILY SSF53720 2 449 4.19E-123 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 M892_12225 9385bf255532b07167f2d7262f3586f1 485 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 3 484 8.5E-228 T 12-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 M892_12225 9385bf255532b07167f2d7262f3586f1 485 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 271 282 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 M892_12225 9385bf255532b07167f2d7262f3586f1 485 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 1 485 56.218 T 12-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 M892_07490 f19a4eeae6e472596046d925ff4edbd0 166 Pfam PF00924 Mechanosensitive ion channel 3 132 4.5E-22 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 M892_07490 f19a4eeae6e472596046d925ff4edbd0 166 Gene3D G3DSA:3.30.70.100 40 137 2.8E-14 T 12-10-2018 M892_07490 f19a4eeae6e472596046d925ff4edbd0 166 SUPERFAMILY SSF82689 41 142 5.1E-14 T 12-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 M892_07490 f19a4eeae6e472596046d925ff4edbd0 166 Gene3D G3DSA:2.30.30.60 3 38 2.4E-5 T 12-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily M892_28395 7563c7396fdf69db908016f0851ac2df 338 Pfam PF01548 Transposase 7 147 6.6E-19 T 12-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 M892_28395 7563c7396fdf69db908016f0851ac2df 338 Pfam PF02371 Transposase IS116/IS110/IS902 family 213 290 1.8E-16 T 12-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 M892_18005 5d09f2dcce12ea32f5c4a0967df40f49 363 SUPERFAMILY SSF55073 219 361 1.1E-36 T 12-10-2018 IPR029787 Nucleotide cyclase M892_18005 5d09f2dcce12ea32f5c4a0967df40f49 363 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 213 360 8.7E-33 T 12-10-2018 IPR000160 GGDEF domain M892_18005 5d09f2dcce12ea32f5c4a0967df40f49 363 Pfam PF00990 Diguanylate cyclase, GGDEF domain 215 361 1.2E-35 T 12-10-2018 IPR000160 GGDEF domain M892_18005 5d09f2dcce12ea32f5c4a0967df40f49 363 SMART SM00267 202 363 1.2E-31 T 12-10-2018 IPR000160 GGDEF domain M892_18005 5d09f2dcce12ea32f5c4a0967df40f49 363 Gene3D G3DSA:3.30.70.270 210 363 1.6E-38 T 12-10-2018 M892_09125 cc25053ffc6972567086eabc722736e0 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 4.5E-31 T 12-10-2018 IPR021131 Ribosomal protein L18e/L15P M892_09125 cc25053ffc6972567086eabc722736e0 144 Gene3D G3DSA:3.100.10.10 70 144 6.8E-13 T 12-10-2018 M892_09125 cc25053ffc6972567086eabc722736e0 144 SUPERFAMILY SSF52080 4 143 3.4E-46 T 12-10-2018 IPR036227 Ribosomal L18e/L15P superfamily M892_09125 cc25053ffc6972567086eabc722736e0 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 19.162 T 12-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 M892_09125 cc25053ffc6972567086eabc722736e0 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 1.8E-50 T 12-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_09125 cc25053ffc6972567086eabc722736e0 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 12-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_10730 e5c4977184d91e94cbeefdacd31b7e37 473 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 274 285 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M892_10730 e5c4977184d91e94cbeefdacd31b7e37 473 Gene3D G3DSA:2.60.40.10 357 473 3.5E-47 T 12-10-2018 IPR013783 Immunoglobulin-like fold M892_10730 e5c4977184d91e94cbeefdacd31b7e37 473 Pfam PF13746 4Fe-4S dicluster domain 222 326 2.0E-41 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M892_10730 e5c4977184d91e94cbeefdacd31b7e37 473 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 43 471 5.5E-174 T 12-10-2018 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021|GO:0055114 M892_10730 e5c4977184d91e94cbeefdacd31b7e37 473 Gene3D G3DSA:3.30.70.20 220 292 3.6E-5 T 12-10-2018 M892_10730 e5c4977184d91e94cbeefdacd31b7e37 473 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 358 470 1.5E-29 T 12-10-2018 IPR032879 FixG, C-terminal immunoglobulin-like domain M892_10730 e5c4977184d91e94cbeefdacd31b7e37 473 SUPERFAMILY SSF54862 107 339 9.07E-33 T 12-10-2018 M892_10730 e5c4977184d91e94cbeefdacd31b7e37 473 Pfam PF12801 4Fe-4S binding domain 97 136 2.3E-8 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M892_15710 267b94ee9c566586a69b17c0551d3e22 575 SUPERFAMILY SSF116726 307 386 1.44E-7 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 M892_15710 267b94ee9c566586a69b17c0551d3e22 575 Pfam PF06826 Predicted Permease Membrane Region 402 570 9.9E-30 T 12-10-2018 IPR006512 YidE/YbjL duplication M892_15710 267b94ee9c566586a69b17c0551d3e22 575 Pfam PF06826 Predicted Permease Membrane Region 15 191 4.0E-32 T 12-10-2018 IPR006512 YidE/YbjL duplication M892_03905 9f657ac1a0e1a4621841f78ed9ef2748 59 Pfam PF06796 Periplasmic nitrate reductase protein NapE 5 55 3.4E-24 T 12-10-2018 IPR010649 Nitrate/trimethylamine N-oxide reductase NapE/TorE M892_03905 9f657ac1a0e1a4621841f78ed9ef2748 59 TIGRFAM TIGR02972 TMAO_torE: trimethylamine N-oxide reductase system, TorE protein 8 57 5.6E-28 T 12-10-2018 IPR014316 Trimethylamine N-oxide reductase system, TorE M892_07270 5c7d0a315f5f609ce29c631ae8cdde0f 638 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 336 350 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 M892_07270 5c7d0a315f5f609ce29c631ae8cdde0f 638 SUPERFAMILY SSF53067 1 182 7.45E-65 T 12-10-2018 M892_07270 5c7d0a315f5f609ce29c631ae8cdde0f 638 SUPERFAMILY SSF100934 534 607 5.89E-6 T 12-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 M892_07270 5c7d0a315f5f609ce29c631ae8cdde0f 638 Gene3D G3DSA:3.90.640.10 228 315 5.0E-165 T 12-10-2018 M892_07270 5c7d0a315f5f609ce29c631ae8cdde0f 638 Gene3D G3DSA:3.30.420.40 5 378 5.0E-165 T 12-10-2018 M892_07270 5c7d0a315f5f609ce29c631ae8cdde0f 638 Pfam PF00012 Hsp70 protein 4 601 7.3E-259 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 M892_07270 5c7d0a315f5f609ce29c631ae8cdde0f 638 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 633 35.859 T 12-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 M892_07270 5c7d0a315f5f609ce29c631ae8cdde0f 638 PRINTS PR00301 70kDa heat shock protein signature 53 61 1.5E-78 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 M892_07270 5c7d0a315f5f609ce29c631ae8cdde0f 638 PRINTS PR00301 70kDa heat shock protein signature 31 43 1.5E-78 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 M892_07270 5c7d0a315f5f609ce29c631ae8cdde0f 638 PRINTS PR00301 70kDa heat shock protein signature 333 349 1.5E-78 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 M892_07270 5c7d0a315f5f609ce29c631ae8cdde0f 638 PRINTS PR00301 70kDa heat shock protein signature 197 207 1.5E-78 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 M892_07270 5c7d0a315f5f609ce29c631ae8cdde0f 638 PRINTS PR00301 70kDa heat shock protein signature 387 406 1.5E-78 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 M892_07270 5c7d0a315f5f609ce29c631ae8cdde0f 638 PRINTS PR00301 70kDa heat shock protein signature 364 384 1.5E-78 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 M892_07270 5c7d0a315f5f609ce29c631ae8cdde0f 638 PRINTS PR00301 70kDa heat shock protein signature 468 484 1.5E-78 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 M892_07270 5c7d0a315f5f609ce29c631ae8cdde0f 638 PRINTS PR00301 70kDa heat shock protein signature 137 157 1.5E-78 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 M892_07270 5c7d0a315f5f609ce29c631ae8cdde0f 638 PRINTS PR00301 70kDa heat shock protein signature 3 16 1.5E-78 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 M892_07270 5c7d0a315f5f609ce29c631ae8cdde0f 638 Gene3D G3DSA:2.60.34.10 382 522 7.5E-64 T 12-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 M892_07270 5c7d0a315f5f609ce29c631ae8cdde0f 638 SUPERFAMILY SSF100920 383 539 3.66E-59 T 12-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 M892_07270 5c7d0a315f5f609ce29c631ae8cdde0f 638 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 191 204 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 M892_07270 5c7d0a315f5f609ce29c631ae8cdde0f 638 SUPERFAMILY SSF53067 186 381 9.72E-65 T 12-10-2018 M892_07270 5c7d0a315f5f609ce29c631ae8cdde0f 638 Gene3D G3DSA:1.20.1270.10 523 602 2.4E-26 T 12-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 M892_07270 5c7d0a315f5f609ce29c631ae8cdde0f 638 Gene3D G3DSA:3.30.420.40 179 365 5.0E-165 T 12-10-2018 M892_07270 5c7d0a315f5f609ce29c631ae8cdde0f 638 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 M892_07270 5c7d0a315f5f609ce29c631ae8cdde0f 638 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 602 1.9E-282 T 12-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 M892_00335 57d28496172b469949c7ee7c62665cf6 560 Gene3D G3DSA:3.30.70.1450 229 288 1.8E-9 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 M892_00335 57d28496172b469949c7ee7c62665cf6 560 Hamap MF_01015 Putative transport protein YbjL [ybjL]. 1 560 57.805 T 12-10-2018 IPR023017 Transport protein YbjL, putative M892_00335 57d28496172b469949c7ee7c62665cf6 560 SUPERFAMILY SSF116726 294 377 5.36E-10 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 M892_00335 57d28496172b469949c7ee7c62665cf6 560 Pfam PF02080 TrkA-C domain 232 281 2.2E-8 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 M892_00335 57d28496172b469949c7ee7c62665cf6 560 Pfam PF02080 TrkA-C domain 309 374 1.5E-9 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 M892_00335 57d28496172b469949c7ee7c62665cf6 560 Pfam PF06826 Predicted Permease Membrane Region 17 185 2.4E-36 T 12-10-2018 IPR006512 YidE/YbjL duplication M892_00335 57d28496172b469949c7ee7c62665cf6 560 Pfam PF06826 Predicted Permease Membrane Region 389 557 1.7E-42 T 12-10-2018 IPR006512 YidE/YbjL duplication M892_00335 57d28496172b469949c7ee7c62665cf6 560 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 21 171 2.5E-27 T 12-10-2018 IPR006512 YidE/YbjL duplication M892_00335 57d28496172b469949c7ee7c62665cf6 560 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 393 544 1.3E-37 T 12-10-2018 IPR006512 YidE/YbjL duplication M892_00335 57d28496172b469949c7ee7c62665cf6 560 SUPERFAMILY SSF116726 231 285 2.75E-10 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 M892_05505 3fc249bb16d3f4da352d524e84172cbf 195 Pfam PF13036 Peptidoglycan-synthase activator LpoB 40 184 4.4E-55 T 12-10-2018 IPR014094 Penicillin-binding protein activator LpoB M892_05505 3fc249bb16d3f4da352d524e84172cbf 195 TIGRFAM TIGR02722 lp_: uncharacterized lipoprotein 3 186 2.4E-74 T 12-10-2018 IPR014094 Penicillin-binding protein activator LpoB M892_05505 3fc249bb16d3f4da352d524e84172cbf 195 Gene3D G3DSA:3.40.50.10610 38 187 3.7E-43 T 12-10-2018 M892_27200 bc8396e795e09301016ad07ae3945ad6 140 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 4 135 2.1E-52 T 12-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 M892_27200 bc8396e795e09301016ad07ae3945ad6 140 Gene3D G3DSA:3.30.300.20 44 140 2.9E-32 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta M892_27200 bc8396e795e09301016ad07ae3945ad6 140 SUPERFAMILY SSF82784 1 135 3.93E-42 T 12-10-2018 IPR036102 OsmC/Ohr superfamily M892_27200 bc8396e795e09301016ad07ae3945ad6 140 Pfam PF02566 OsmC-like protein 38 133 6.6E-18 T 12-10-2018 IPR003718 OsmC/Ohr family M892_27200 bc8396e795e09301016ad07ae3945ad6 140 Gene3D G3DSA:2.20.25.10 1 43 1.6E-21 T 12-10-2018 M892_25010 b4b22a9a9235bbfeef142d7c17be7d14 297 Pfam PF03466 LysR substrate binding domain 114 293 5.5E-11 T 12-10-2018 IPR005119 LysR, substrate-binding M892_25010 b4b22a9a9235bbfeef142d7c17be7d14 297 Gene3D G3DSA:1.10.10.10 3 86 2.0E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_25010 b4b22a9a9235bbfeef142d7c17be7d14 297 SUPERFAMILY SSF46785 5 89 1.9E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_25010 b4b22a9a9235bbfeef142d7c17be7d14 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 2.8E-14 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_25010 b4b22a9a9235bbfeef142d7c17be7d14 297 SUPERFAMILY SSF53850 95 295 7.19E-16 T 12-10-2018 M892_25010 b4b22a9a9235bbfeef142d7c17be7d14 297 Gene3D G3DSA:3.40.190.290 95 295 1.7E-17 T 12-10-2018 M892_06310 0518b71d9721f96f74a7a7636454d864 73 Pfam PF10981 Protein of unknown function (DUF2788) 18 67 1.1E-18 T 12-10-2018 IPR021249 Protein of unknown function DUF2788 M892_11245 286a905de2e2446de3d39156a5bd75d2 249 Pfam PF01609 Transposase DDE domain 85 243 2.5E-17 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_11245 286a905de2e2446de3d39156a5bd75d2 249 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 2 73 1.5E-25 T 12-10-2018 IPR025161 Putative transposase IS4/IS5 family M892_04325 286a905de2e2446de3d39156a5bd75d2 249 Pfam PF01609 Transposase DDE domain 85 243 2.5E-17 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_04325 286a905de2e2446de3d39156a5bd75d2 249 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 2 73 1.5E-25 T 12-10-2018 IPR025161 Putative transposase IS4/IS5 family M892_16460 d1997541135d75eac051b23824eabf69 476 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 473 1.0E-196 T 12-10-2018 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0016021|GO:1904659 M892_16460 d1997541135d75eac051b23824eabf69 476 Gene3D G3DSA:3.30.1360.60 394 475 8.8E-29 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 M892_16460 d1997541135d75eac051b23824eabf69 476 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 375 458 6.4E-21 T 12-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 M892_16460 d1997541135d75eac051b23824eabf69 476 Pfam PF00367 phosphotransferase system, EIIB 402 434 7.3E-12 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 M892_16460 d1997541135d75eac051b23824eabf69 476 SUPERFAMILY SSF55604 399 472 9.68E-20 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 M892_16460 d1997541135d75eac051b23824eabf69 476 Pfam PF02378 Phosphotransferase system, EIIC 13 318 8.0E-75 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 M892_16460 d1997541135d75eac051b23824eabf69 476 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 412 429 - T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 M892_12430 514e4f212d0d8964f95dd7511664934f 97 Pfam PF12292 Protein of unknown function (DUF3624) 5 83 1.4E-36 T 12-10-2018 IPR022072 Protein of unknown function DUF3624 M892_10240 ec226a89349dcc702734612d092351a1 598 SUPERFAMILY SSF143975 3 417 7.59E-130 T 12-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 M892_10240 ec226a89349dcc702734612d092351a1 598 Hamap MF_02094 Phosphogluconate dehydratase [edd]. 2 598 53.367 T 12-10-2018 M892_10240 ec226a89349dcc702734612d092351a1 598 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 504 515 - T 12-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 M892_10240 ec226a89349dcc702734612d092351a1 598 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 155 165 - T 12-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 M892_10240 ec226a89349dcc702734612d092351a1 598 SUPERFAMILY SSF52016 418 596 1.18E-51 T 12-10-2018 M892_10240 ec226a89349dcc702734612d092351a1 598 Gene3D G3DSA:3.50.30.80 418 563 1.6E-47 T 12-10-2018 M892_10240 ec226a89349dcc702734612d092351a1 598 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 5 596 1.1E-247 T 12-10-2018 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12 M892_10240 ec226a89349dcc702734612d092351a1 598 Pfam PF00920 Dehydratase family 68 594 1.7E-148 T 12-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 M892_09385 14e6644aae404e86b163d5ab954f9151 376 Gene3D G3DSA:3.40.50.2000 200 365 5.0E-7 T 12-10-2018 M892_19730 35cea066d66198d20b3aed63d469b9d1 278 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 7 276 66.158 T 12-10-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein M892_19730 35cea066d66198d20b3aed63d469b9d1 278 Pfam PF03618 Kinase/pyrophosphorylase 10 267 4.9E-73 T 12-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 M892_12490 46774d3aabc094ccd71834ad4fb38ff3 366 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 14 359 4.7E-120 T 12-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 M892_12490 46774d3aabc094ccd71834ad4fb38ff3 366 Pfam PF01761 3-dehydroquinate synthase 72 329 3.4E-111 T 12-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 M892_12490 46774d3aabc094ccd71834ad4fb38ff3 366 SUPERFAMILY SSF56796 4 360 5.76E-118 T 12-10-2018 M892_12490 46774d3aabc094ccd71834ad4fb38ff3 366 PIRSF PIRSF001455 22 362 1.9E-107 T 12-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 M892_12490 46774d3aabc094ccd71834ad4fb38ff3 366 Gene3D G3DSA:3.40.50.1970 1 176 9.7E-66 T 12-10-2018 M892_12490 46774d3aabc094ccd71834ad4fb38ff3 366 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 360 74.831 T 12-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 M892_12490 46774d3aabc094ccd71834ad4fb38ff3 366 Gene3D G3DSA:1.20.1090.10 177 366 7.8E-71 T 12-10-2018 M892_18815 6d69df3da5bfe28a29c28d0f923fc22b 306 PIRSF PIRSF036979 12 304 3.2E-98 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 M892_18815 6d69df3da5bfe28a29c28d0f923fc22b 306 SUPERFAMILY SSF52768 12 303 5.76E-95 T 12-10-2018 IPR023696 Ureohydrolase domain superfamily M892_18815 6d69df3da5bfe28a29c28d0f923fc22b 306 Pfam PF00491 Arginase family 33 297 1.9E-89 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 M892_18815 6d69df3da5bfe28a29c28d0f923fc22b 306 Gene3D G3DSA:3.40.800.10 1 305 1.3E-104 T 12-10-2018 M892_18815 6d69df3da5bfe28a29c28d0f923fc22b 306 TIGRFAM TIGR01230 agmatinase: agmatinase 24 299 1.2E-93 T 12-10-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 M892_18815 6d69df3da5bfe28a29c28d0f923fc22b 306 ProSitePatterns PS01053 Arginase family signature. 229 250 - T 12-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 M892_08550 8afb04a9f327c824767ddfa77eb3d13d 418 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 202 384 6.2E-43 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M892_08550 8afb04a9f327c824767ddfa77eb3d13d 418 SMART SM00283 156 417 7.1E-69 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M892_08550 8afb04a9f327c824767ddfa77eb3d13d 418 Gene3D G3DSA:1.10.287.950 90 418 1.4E-68 T 12-10-2018 M892_08550 8afb04a9f327c824767ddfa77eb3d13d 418 SUPERFAMILY SSF58104 109 418 5.49E-76 T 12-10-2018 M892_08550 8afb04a9f327c824767ddfa77eb3d13d 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 254 281 3.2E-23 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M892_08550 8afb04a9f327c824767ddfa77eb3d13d 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 283 312 3.2E-23 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M892_08550 8afb04a9f327c824767ddfa77eb3d13d 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 68 88 3.2E-23 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M892_01685 a20f6e792acaadeb6032e7bcad28cd40 417 SUPERFAMILY SSF53098 7 416 4.17E-116 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_01685 a20f6e792acaadeb6032e7bcad28cd40 417 Gene3D G3DSA:3.90.350.10 24 305 2.8E-77 T 12-10-2018 IPR014736 Transposase, Tn5-like, core M892_01685 a20f6e792acaadeb6032e7bcad28cd40 417 Pfam PF02281 Transposase Tn5 dimerisation domain 326 411 1.3E-17 T 12-10-2018 IPR003201 Transposase Tn5, dimerisation M892_01685 a20f6e792acaadeb6032e7bcad28cd40 417 Gene3D G3DSA:1.10.740.10 306 416 8.2E-41 T 12-10-2018 IPR014737 Transposase, Tn5-like, C-terminal M892_02645 7a426826ee3ade5c8ae43f176a562ad4 331 Gene3D G3DSA:1.10.3470.10 5 328 5.8E-93 T 12-10-2018 IPR037294 ABC transporter, BtuC-like M892_02645 7a426826ee3ade5c8ae43f176a562ad4 331 Hamap MF_01004 Vitamin B12 import system permease protein BtuC [btuC]. 3 329 30.659 T 12-10-2018 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC GO:0015889|GO:0016020 M892_02645 7a426826ee3ade5c8ae43f176a562ad4 331 Pfam PF01032 FecCD transport family 19 326 9.7E-81 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 M892_02645 7a426826ee3ade5c8ae43f176a562ad4 331 SUPERFAMILY SSF81345 7 326 1.57E-78 T 12-10-2018 IPR037294 ABC transporter, BtuC-like M892_13205 e5c89d965b24d356fe4fde337256ecfb 200 Gene3D G3DSA:3.90.950.10 1 199 7.5E-84 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like M892_13205 e5c89d965b24d356fe4fde337256ecfb 200 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 194 2.2E-65 T 12-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 M892_13205 e5c89d965b24d356fe4fde337256ecfb 200 Pfam PF01725 Ham1 family 4 191 3.5E-58 T 12-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 M892_13205 e5c89d965b24d356fe4fde337256ecfb 200 SUPERFAMILY SSF52972 1 195 3.14E-74 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like M892_13205 e5c89d965b24d356fe4fde337256ecfb 200 Hamap MF_01405 dITP/XTP pyrophosphatase. 2 196 51.227 T 12-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 M892_26925 91a3a93f0504bdefd807c90c678b0796 60 SUPERFAMILY SSF89447 1 47 2.62E-8 T 12-10-2018 IPR037914 SpoVT-AbrB domain superfamily M892_26925 91a3a93f0504bdefd807c90c678b0796 60 Gene3D G3DSA:2.10.260.10 6 47 1.7E-6 T 12-10-2018 M892_26925 91a3a93f0504bdefd807c90c678b0796 60 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 9 45 2.6E-6 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 M892_26925 91a3a93f0504bdefd807c90c678b0796 60 SMART SM00966 6 49 0.0023 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 M892_09975 3928d65881eefc742f135ce1fef8d07b 254 Pfam PF01026 TatD related DNase 2 252 1.8E-63 T 12-10-2018 IPR001130 TatD family GO:0016788 M892_09975 3928d65881eefc742f135ce1fef8d07b 254 SUPERFAMILY SSF51556 1 253 5.21E-80 T 12-10-2018 IPR032466 Metal-dependent hydrolase M892_09975 3928d65881eefc742f135ce1fef8d07b 254 PIRSF PIRSF005902 1 254 2.1E-70 T 12-10-2018 IPR001130 TatD family GO:0016788 M892_09975 3928d65881eefc742f135ce1fef8d07b 254 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 1 252 1.8E-70 T 12-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 M892_09975 3928d65881eefc742f135ce1fef8d07b 254 Gene3D G3DSA:3.20.20.140 1 253 1.2E-79 T 12-10-2018 M892_09205 96a83967fdbc6271f6aded964cca3a7b 274 Gene3D G3DSA:2.30.30.30 115 195 7.5E-33 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 M892_09205 96a83967fdbc6271f6aded964cca3a7b 274 SUPERFAMILY SSF50104 127 272 1.68E-61 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily M892_09205 96a83967fdbc6271f6aded964cca3a7b 274 SMART SM01382 124 252 5.1E-92 T 12-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 M892_09205 96a83967fdbc6271f6aded964cca3a7b 274 PIRSF PIRSF002158 13 274 9.3E-101 T 12-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_09205 96a83967fdbc6271f6aded964cca3a7b 274 SMART SM01383 42 118 6.8E-45 T 12-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_09205 96a83967fdbc6271f6aded964cca3a7b 274 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 250 2.2E-56 T 12-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 M892_09205 96a83967fdbc6271f6aded964cca3a7b 274 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 273 1.4E-130 T 12-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 M892_09205 96a83967fdbc6271f6aded964cca3a7b 274 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 12-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_09205 96a83967fdbc6271f6aded964cca3a7b 274 SUPERFAMILY SSF50249 2 125 2.84E-49 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M892_09205 96a83967fdbc6271f6aded964cca3a7b 274 Gene3D G3DSA:4.10.950.10 196 274 1.1E-36 T 12-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_09205 96a83967fdbc6271f6aded964cca3a7b 274 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 2.4E-32 T 12-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_09205 96a83967fdbc6271f6aded964cca3a7b 274 Gene3D G3DSA:2.40.50.140 1 114 5.4E-50 T 12-10-2018 M892_09205 96a83967fdbc6271f6aded964cca3a7b 274 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 47.422 T 12-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 M892_18905 86a75220250d12040555a8e18c6f6124 707 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 122 615 3.5E-72 T 12-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit M892_18905 86a75220250d12040555a8e18c6f6124 707 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 24 696 3.5E-209 T 12-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ M892_25555 ceb1c3aa08f6b4951aa5e04b31129ea9 688 Pfam PF00990 Diguanylate cyclase, GGDEF domain 515 675 5.5E-36 T 12-10-2018 IPR000160 GGDEF domain M892_25555 ceb1c3aa08f6b4951aa5e04b31129ea9 688 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 510 680 1.7E-37 T 12-10-2018 IPR000160 GGDEF domain M892_25555 ceb1c3aa08f6b4951aa5e04b31129ea9 688 Gene3D G3DSA:3.30.450.40 156 314 2.2E-7 T 12-10-2018 IPR029016 GAF-like domain superfamily M892_25555 ceb1c3aa08f6b4951aa5e04b31129ea9 688 SUPERFAMILY SSF55073 519 681 5.26E-38 T 12-10-2018 IPR029787 Nucleotide cyclase M892_25555 ceb1c3aa08f6b4951aa5e04b31129ea9 688 Gene3D G3DSA:3.30.450.40 315 498 2.4E-5 T 12-10-2018 IPR029016 GAF-like domain superfamily M892_25555 ceb1c3aa08f6b4951aa5e04b31129ea9 688 SUPERFAMILY SSF55781 323 493 1.02E-5 T 12-10-2018 M892_25555 ceb1c3aa08f6b4951aa5e04b31129ea9 688 SMART SM00267 503 680 8.6E-47 T 12-10-2018 IPR000160 GGDEF domain M892_25555 ceb1c3aa08f6b4951aa5e04b31129ea9 688 SUPERFAMILY SSF55781 161 310 4.36E-7 T 12-10-2018 M892_25555 ceb1c3aa08f6b4951aa5e04b31129ea9 688 Gene3D G3DSA:3.30.70.270 499 683 3.1E-44 T 12-10-2018 M892_03805 01f01cb27d075b552a1b54cd97df4a26 343 Gene3D G3DSA:2.40.420.20 35 334 1.0E-74 T 12-10-2018 M892_03805 01f01cb27d075b552a1b54cd97df4a26 343 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 33 337 3.6E-85 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 M892_03805 01f01cb27d075b552a1b54cd97df4a26 343 Gene3D G3DSA:2.40.50.100 56 188 1.0E-74 T 12-10-2018 M892_03805 01f01cb27d075b552a1b54cd97df4a26 343 Gene3D G3DSA:2.40.30.170 41 267 1.0E-74 T 12-10-2018 M892_03805 01f01cb27d075b552a1b54cd97df4a26 343 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 58 251 8.3E-14 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain M892_03805 01f01cb27d075b552a1b54cd97df4a26 343 Gene3D G3DSA:1.10.287.470 90 149 1.0E-74 T 12-10-2018 M892_03805 01f01cb27d075b552a1b54cd97df4a26 343 SUPERFAMILY SSF111369 47 264 3.66E-32 T 12-10-2018 M892_09140 373e78b454ba8d0fb118e3d8020ad1d1 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 25.541 T 12-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_09140 373e78b454ba8d0fb118e3d8020ad1d1 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 8.5E-44 T 12-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_09140 373e78b454ba8d0fb118e3d8020ad1d1 117 Gene3D G3DSA:3.30.420.100 1 117 7.8E-44 T 12-10-2018 M892_09140 373e78b454ba8d0fb118e3d8020ad1d1 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 8.8E-43 T 12-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_09140 373e78b454ba8d0fb118e3d8020ad1d1 117 SUPERFAMILY SSF53137 3 115 6.54E-51 T 12-10-2018 M892_11000 42dcd00c64b307cc70450746dd3c733e 630 Pfam PF00271 Helicase conserved C-terminal domain 248 352 4.9E-20 T 12-10-2018 IPR001650 Helicase, C-terminal M892_11000 42dcd00c64b307cc70450746dd3c733e 630 Pfam PF00570 HRDC domain 556 622 2.6E-22 T 12-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 M892_11000 42dcd00c64b307cc70450746dd3c733e 630 SUPERFAMILY SSF47819 553 628 6.54E-26 T 12-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 M892_11000 42dcd00c64b307cc70450746dd3c733e 630 Gene3D G3DSA:1.10.10.10 428 538 1.6E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_11000 42dcd00c64b307cc70450746dd3c733e 630 Gene3D G3DSA:3.40.50.300 232 427 1.9E-60 T 12-10-2018 M892_11000 42dcd00c64b307cc70450746dd3c733e 630 Gene3D G3DSA:1.10.150.80 545 629 4.4E-28 T 12-10-2018 M892_11000 42dcd00c64b307cc70450746dd3c733e 630 SMART SM00956 433 536 1.3E-48 T 12-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 M892_11000 42dcd00c64b307cc70450746dd3c733e 630 Gene3D G3DSA:3.40.50.300 26 230 3.6E-80 T 12-10-2018 M892_11000 42dcd00c64b307cc70450746dd3c733e 630 Pfam PF00270 DEAD/DEAH box helicase 50 208 5.5E-18 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 M892_11000 42dcd00c64b307cc70450746dd3c733e 630 SMART SM00490 272 353 9.3E-29 T 12-10-2018 IPR001650 Helicase, C-terminal M892_11000 42dcd00c64b307cc70450746dd3c733e 630 SMART SM00487 44 240 7.4E-28 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain M892_11000 42dcd00c64b307cc70450746dd3c733e 630 Pfam PF09382 RQC domain 428 536 2.9E-35 T 12-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 M892_11000 42dcd00c64b307cc70450746dd3c733e 630 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 38 485 2.3E-187 T 12-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 M892_11000 42dcd00c64b307cc70450746dd3c733e 630 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 36 625 2.3E-251 T 12-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 M892_11000 42dcd00c64b307cc70450746dd3c733e 630 SMART SM00341 552 630 2.1E-22 T 12-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 M892_11000 42dcd00c64b307cc70450746dd3c733e 630 SUPERFAMILY SSF52540 230 478 1.28E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_11000 42dcd00c64b307cc70450746dd3c733e 630 SUPERFAMILY SSF52540 36 221 7.79E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_11000 42dcd00c64b307cc70450746dd3c733e 630 Pfam PF16124 RecQ zinc-binding 365 426 4.8E-18 T 12-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain M892_22920 bfa86946baa598a46cee4f656100f778 65 Pfam PF13006 Insertion element 4 transposase N-terminal 16 56 1.4E-8 T 12-10-2018 IPR024473 Transposase, IS4, N-terminal M892_18360 09484d9cf355c43cbb8c34cb66aec1ee 241 SUPERFAMILY SSF48317 22 225 8.76E-20 T 12-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily M892_18360 09484d9cf355c43cbb8c34cb66aec1ee 241 SMART SM00014 77 225 2.0E-10 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase M892_18360 09484d9cf355c43cbb8c34cb66aec1ee 241 Gene3D G3DSA:1.20.144.10 5 236 5.8E-46 T 12-10-2018 M892_18360 09484d9cf355c43cbb8c34cb66aec1ee 241 Pfam PF01569 PAP2 superfamily 83 229 2.4E-18 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase M892_07000 b8e7662478f45a3ae676fb64fa8ce19b 761 SMART SM00028 335 368 37.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_07000 b8e7662478f45a3ae676fb64fa8ce19b 761 SMART SM00028 89 122 29.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_07000 b8e7662478f45a3ae676fb64fa8ce19b 761 SMART SM00028 255 288 27.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_07000 b8e7662478f45a3ae676fb64fa8ce19b 761 SMART SM00028 175 208 310.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_07000 b8e7662478f45a3ae676fb64fa8ce19b 761 SMART SM00028 417 450 420.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_07000 b8e7662478f45a3ae676fb64fa8ce19b 761 SMART SM00028 295 328 0.043 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_07000 b8e7662478f45a3ae676fb64fa8ce19b 761 SUPERFAMILY SSF48452 179 367 3.2E-14 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_07000 b8e7662478f45a3ae676fb64fa8ce19b 761 Gene3D G3DSA:1.25.40.10 72 241 2.5E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_07000 b8e7662478f45a3ae676fb64fa8ce19b 761 SUPERFAMILY SSF48452 337 446 7.59E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_07000 b8e7662478f45a3ae676fb64fa8ce19b 761 Gene3D G3DSA:1.25.40.10 242 459 7.0E-20 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_26105 cb79b535f35aa17667c4e8db4c27ddfb 83 Pfam PF04606 Ogr/Delta-like zinc finger 5 50 8.8E-16 T 12-10-2018 IPR007684 Zinc finger, Ogr/Delta-type M892_15805 6c3c1dda312a5de2b3e2842f37d825ff 337 SUPERFAMILY SSF53774 3 336 2.09E-114 T 12-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 M892_15805 6c3c1dda312a5de2b3e2842f37d825ff 337 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 84 94 - T 12-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 M892_15805 6c3c1dda312a5de2b3e2842f37d825ff 337 PIRSF PIRSF500176 2 333 1.7E-110 T 12-10-2018 M892_15805 6c3c1dda312a5de2b3e2842f37d825ff 337 Gene3D G3DSA:3.40.50.40 210 337 6.1E-45 T 12-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 M892_15805 6c3c1dda312a5de2b3e2842f37d825ff 337 PRINTS PR00139 Asparaginase/glutaminase family signature 261 279 8.4E-17 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 M892_15805 6c3c1dda312a5de2b3e2842f37d825ff 337 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 8.4E-17 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 M892_15805 6c3c1dda312a5de2b3e2842f37d825ff 337 PRINTS PR00139 Asparaginase/glutaminase family signature 83 101 8.4E-17 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 M892_15805 6c3c1dda312a5de2b3e2842f37d825ff 337 Gene3D G3DSA:3.40.50.1170 1 209 9.8E-94 T 12-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 M892_15805 6c3c1dda312a5de2b3e2842f37d825ff 337 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 12-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 M892_15805 6c3c1dda312a5de2b3e2842f37d825ff 337 Pfam PF00710 Asparaginase, N-terminal 5 192 8.6E-68 T 12-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 M892_15805 6c3c1dda312a5de2b3e2842f37d825ff 337 SMART SM00870 5 324 1.3E-141 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 M892_15805 6c3c1dda312a5de2b3e2842f37d825ff 337 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 4 336 6.1E-117 T 12-10-2018 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 Reactome: R-HSA-70614 M892_15805 6c3c1dda312a5de2b3e2842f37d825ff 337 PIRSF PIRSF001220 1 335 2.0E-95 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 M892_18130 512840dba83542401f09c114d101d422 213 Pfam PF03922 OmpW family 24 213 6.5E-71 T 12-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 M892_18130 512840dba83542401f09c114d101d422 213 SUPERFAMILY SSF56925 23 213 1.65E-33 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel M892_18130 512840dba83542401f09c114d101d422 213 Gene3D G3DSA:2.40.160.20 22 213 6.2E-81 T 12-10-2018 M892_23450 d6a066c61ba6644b11d8a020fcc859c8 150 TIGRFAM TIGR02293 TAS_TIGR02293: putative toxin-antitoxin system antitoxin component, TIGR02293 family 24 150 1.1E-31 T 12-10-2018 IPR011979 Conserved hypothetical protein CHP02293 M892_23450 d6a066c61ba6644b11d8a020fcc859c8 150 Pfam PF09722 Protein of unknown function (DUF2384) 98 147 9.7E-15 T 12-10-2018 IPR024467 Domain of unknown function DUF2384 M892_18885 96f90914686b272b978b651ee1f2c227 449 SUPERFAMILY SSF52172 6 192 8.97E-39 T 12-10-2018 IPR011006 CheY-like superfamily M892_18885 96f90914686b272b978b651ee1f2c227 449 SUPERFAMILY SSF46689 391 443 1.79E-5 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_18885 96f90914686b272b978b651ee1f2c227 449 Pfam PF00072 Response regulator receiver domain 9 118 2.2E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_18885 96f90914686b272b978b651ee1f2c227 449 SUPERFAMILY SSF52540 148 370 2.38E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_18885 96f90914686b272b978b651ee1f2c227 449 Gene3D G3DSA:1.10.8.60 316 377 2.7E-13 T 12-10-2018 M892_18885 96f90914686b272b978b651ee1f2c227 449 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 234 249 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 M892_18885 96f90914686b272b978b651ee1f2c227 449 Pfam PF00158 Sigma-54 interaction domain 148 311 4.0E-64 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 M892_18885 96f90914686b272b978b651ee1f2c227 449 Gene3D G3DSA:3.40.50.2300 4 138 3.6E-33 T 12-10-2018 M892_18885 96f90914686b272b978b651ee1f2c227 449 SMART SM00382 168 308 3.3E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_18885 96f90914686b272b978b651ee1f2c227 449 SMART SM00448 7 118 3.4E-31 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_18885 96f90914686b272b978b651ee1f2c227 449 Gene3D G3DSA:1.10.10.60 381 446 5.7E-6 T 12-10-2018 M892_18885 96f90914686b272b978b651ee1f2c227 449 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 354 363 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site M892_18885 96f90914686b272b978b651ee1f2c227 449 Gene3D G3DSA:3.40.50.300 139 315 1.2E-57 T 12-10-2018 M892_22055 764e9940325e24c29fc15bcaa5123c8f 272 Gene3D G3DSA:3.40.190.10 32 249 3.4E-61 T 12-10-2018 M892_22055 764e9940325e24c29fc15bcaa5123c8f 272 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 40 260 4.3E-51 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M892_22055 764e9940325e24c29fc15bcaa5123c8f 272 SUPERFAMILY SSF53850 7 259 2.38E-58 T 12-10-2018 M892_22055 764e9940325e24c29fc15bcaa5123c8f 272 Gene3D G3DSA:3.40.190.10 125 216 3.4E-61 T 12-10-2018 M892_22055 764e9940325e24c29fc15bcaa5123c8f 272 SMART SM00079 39 261 0.002 T 12-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 M892_22055 764e9940325e24c29fc15bcaa5123c8f 272 SMART SM00062 39 262 2.8E-46 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M892_17075 16f093efc108932097483748ebb3d43e 479 Gene3D G3DSA:3.20.20.70 30 280 2.0E-173 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M892_17075 16f093efc108932097483748ebb3d43e 479 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 280 479 29.597 T 12-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 M892_17075 16f093efc108932097483748ebb3d43e 479 Pfam PF00218 Indole-3-glycerol phosphate synthase 27 276 2.5E-94 T 12-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 M892_17075 16f093efc108932097483748ebb3d43e 479 SUPERFAMILY SSF51366 23 276 8.83E-83 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 M892_17075 16f093efc108932097483748ebb3d43e 479 Gene3D G3DSA:3.20.20.70 281 473 2.0E-173 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M892_17075 16f093efc108932097483748ebb3d43e 479 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 25 279 34.999 T 12-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 M892_17075 16f093efc108932097483748ebb3d43e 479 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 282 471 2.4E-56 T 12-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 M892_17075 16f093efc108932097483748ebb3d43e 479 SUPERFAMILY SSF51366 282 477 5.65E-53 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 M892_17075 16f093efc108932097483748ebb3d43e 479 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 72 90 - T 12-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 M892_08605 c11511c8d0dd6ce5d1708a79f20c0bae 119 SMART SM00905 6 116 2.7E-48 T 12-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 M892_08605 c11511c8d0dd6ce5d1708a79f20c0bae 119 SUPERFAMILY SSF55620 3 117 4.11E-37 T 12-10-2018 M892_08605 c11511c8d0dd6ce5d1708a79f20c0bae 119 Gene3D G3DSA:3.30.1130.10 1 118 2.5E-45 T 12-10-2018 M892_08605 c11511c8d0dd6ce5d1708a79f20c0bae 119 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 4 116 3.2E-30 T 12-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 M892_08605 c11511c8d0dd6ce5d1708a79f20c0bae 119 TIGRFAM TIGR00526 folB_dom: FolB domain 4 117 2.6E-36 T 12-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 M892_08605 c11511c8d0dd6ce5d1708a79f20c0bae 119 Pfam PF02152 Dihydroneopterin aldolase 6 115 2.8E-32 T 12-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 M892_02300 42e52b8ad700d2e474a6fe430398976f 367 Gene3D G3DSA:2.40.160.10 65 365 3.9E-12 T 12-10-2018 IPR023614 Porin domain superfamily M892_02300 42e52b8ad700d2e474a6fe430398976f 367 SUPERFAMILY SSF56935 30 367 7.02E-27 T 12-10-2018 M892_02300 42e52b8ad700d2e474a6fe430398976f 367 Pfam PF13609 Gram-negative porin 80 363 5.2E-9 T 12-10-2018 M892_08150 b17884badee96a14e4b9df6a66ab3950 211 Gene3D G3DSA:1.20.1260.140 1 209 2.5E-84 T 12-10-2018 IPR038659 Alternative oxidase superfamily M892_08150 b17884badee96a14e4b9df6a66ab3950 211 SUPERFAMILY SSF47240 65 201 5.41E-5 T 12-10-2018 IPR009078 Ferritin-like superfamily M892_08150 b17884badee96a14e4b9df6a66ab3950 211 PIRSF PIRSF005229 1 210 2.1E-96 T 12-10-2018 IPR002680 Alternative oxidase GO:0009916|GO:0055114 M892_08150 b17884badee96a14e4b9df6a66ab3950 211 Pfam PF01786 Alternative oxidase 3 199 5.5E-77 T 12-10-2018 IPR002680 Alternative oxidase GO:0009916|GO:0055114 M892_24745 df1c1913d7a67cd718b9d897cd07d932 412 Gene3D G3DSA:1.10.4160.10 3 411 2.3E-46 T 12-10-2018 IPR038271 Purine-cytosine permease superfamily M892_24745 df1c1913d7a67cd718b9d897cd07d932 412 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 11 397 9.7E-64 T 12-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 M892_16935 cfb42e591900a0c84371efac3b398346 346 Gene3D G3DSA:3.90.550.10 6 207 8.0E-35 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M892_16935 cfb42e591900a0c84371efac3b398346 346 SUPERFAMILY SSF53448 22 197 1.13E-36 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M892_16935 cfb42e591900a0c84371efac3b398346 346 Pfam PF00535 Glycosyl transferase family 2 25 187 4.1E-33 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 M892_07225 4724f8f696d48a2660d86176d5c4e3e4 177 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 59 96 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 M892_07225 4724f8f696d48a2660d86176d5c4e3e4 177 Pfam PF14437 MafB19-like deaminase 11 155 7.9E-33 T 12-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 M892_07225 4724f8f696d48a2660d86176d5c4e3e4 177 SUPERFAMILY SSF53927 5 159 2.01E-56 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 M892_07225 4724f8f696d48a2660d86176d5c4e3e4 177 Gene3D G3DSA:3.40.140.10 3 169 5.3E-64 T 12-10-2018 M892_07225 4724f8f696d48a2660d86176d5c4e3e4 177 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 14 155 45.376 T 12-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 M892_13415 eac2238fef37f4b5707fe583ddf74697 597 SUPERFAMILY SSF50447 165 288 1.54E-30 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily M892_13415 eac2238fef37f4b5707fe583ddf74697 597 SMART SM00838 398 486 0.0031 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like M892_13415 eac2238fef37f4b5707fe583ddf74697 597 SUPERFAMILY SSF52540 2 205 1.2E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_13415 eac2238fef37f4b5707fe583ddf74697 597 SUPERFAMILY SSF54980 399 493 1.97E-24 T 12-10-2018 IPR035647 EF-G domain III/V-like M892_13415 eac2238fef37f4b5707fe583ddf74697 597 Pfam PF00679 Elongation factor G C-terminus 399 482 9.7E-20 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like M892_13415 eac2238fef37f4b5707fe583ddf74697 597 Gene3D G3DSA:3.30.70.2570 479 553 7.2E-33 T 12-10-2018 IPR038363 LepA, C-terminal domain superfamily M892_13415 eac2238fef37f4b5707fe583ddf74697 597 Pfam PF06421 GTP-binding protein LepA C-terminus 487 592 3.3E-49 T 12-10-2018 IPR013842 GTP-binding protein LepA, C-terminal M892_13415 eac2238fef37f4b5707fe583ddf74697 597 Pfam PF03144 Elongation factor Tu domain 2 205 275 2.1E-10 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 M892_13415 eac2238fef37f4b5707fe583ddf74697 597 TIGRFAM TIGR01393 lepA: elongation factor 4 2 594 2.0E-301 T 12-10-2018 IPR006297 Elongation factor 4 GO:0005525 M892_13415 eac2238fef37f4b5707fe583ddf74697 597 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 176 2.8E-17 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 M892_13415 eac2238fef37f4b5707fe583ddf74697 597 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site M892_13415 eac2238fef37f4b5707fe583ddf74697 597 Gene3D G3DSA:3.30.70.870 286 367 1.3E-35 T 12-10-2018 M892_13415 eac2238fef37f4b5707fe583ddf74697 597 Gene3D G3DSA:3.40.50.300 1 185 4.9E-71 T 12-10-2018 M892_13415 eac2238fef37f4b5707fe583ddf74697 597 Gene3D G3DSA:2.40.30.10 186 285 6.1E-35 T 12-10-2018 M892_13415 eac2238fef37f4b5707fe583ddf74697 597 SUPERFAMILY SSF54980 292 370 1.8E-18 T 12-10-2018 IPR035647 EF-G domain III/V-like M892_13415 eac2238fef37f4b5707fe583ddf74697 597 Pfam PF00009 Elongation factor Tu GTP binding domain 2 181 1.1E-52 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M892_13415 eac2238fef37f4b5707fe583ddf74697 597 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 306.713 T 12-10-2018 IPR006297 Elongation factor 4 GO:0005525 M892_13415 eac2238fef37f4b5707fe583ddf74697 597 PRINTS PR00315 GTP-binding elongation factor signature 49 57 4.0E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M892_13415 eac2238fef37f4b5707fe583ddf74697 597 PRINTS PR00315 GTP-binding elongation factor signature 6 19 4.0E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M892_13415 eac2238fef37f4b5707fe583ddf74697 597 PRINTS PR00315 GTP-binding elongation factor signature 90 101 4.0E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M892_13415 eac2238fef37f4b5707fe583ddf74697 597 PRINTS PR00315 GTP-binding elongation factor signature 126 135 4.0E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M892_13415 eac2238fef37f4b5707fe583ddf74697 597 PRINTS PR00315 GTP-binding elongation factor signature 74 84 4.0E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M892_13415 eac2238fef37f4b5707fe583ddf74697 597 Gene3D G3DSA:3.30.70.3380 368 478 6.6E-40 T 12-10-2018 M892_01750 d5cf655575b1411e9e9a8820a46ddf91 93 Pfam PF01527 Transposase 3 76 3.2E-9 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 M892_01750 d5cf655575b1411e9e9a8820a46ddf91 93 SUPERFAMILY SSF46689 4 91 3.94E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_04805 d5cf655575b1411e9e9a8820a46ddf91 93 Pfam PF01527 Transposase 3 76 3.2E-9 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 M892_04805 d5cf655575b1411e9e9a8820a46ddf91 93 SUPERFAMILY SSF46689 4 91 3.94E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_21520 d5cf655575b1411e9e9a8820a46ddf91 93 Pfam PF01527 Transposase 3 76 3.2E-9 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 M892_21520 d5cf655575b1411e9e9a8820a46ddf91 93 SUPERFAMILY SSF46689 4 91 3.94E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_22895 d5cf655575b1411e9e9a8820a46ddf91 93 Pfam PF01527 Transposase 3 76 3.2E-9 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 M892_22895 d5cf655575b1411e9e9a8820a46ddf91 93 SUPERFAMILY SSF46689 4 91 3.94E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_22940 d5cf655575b1411e9e9a8820a46ddf91 93 Pfam PF01527 Transposase 3 76 3.2E-9 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 M892_22940 d5cf655575b1411e9e9a8820a46ddf91 93 SUPERFAMILY SSF46689 4 91 3.94E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_05595 d5cf655575b1411e9e9a8820a46ddf91 93 Pfam PF01527 Transposase 3 76 3.2E-9 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 M892_05595 d5cf655575b1411e9e9a8820a46ddf91 93 SUPERFAMILY SSF46689 4 91 3.94E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_21095 d5cf655575b1411e9e9a8820a46ddf91 93 Pfam PF01527 Transposase 3 76 3.2E-9 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 M892_21095 d5cf655575b1411e9e9a8820a46ddf91 93 SUPERFAMILY SSF46689 4 91 3.94E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_28350 d5cf655575b1411e9e9a8820a46ddf91 93 Pfam PF01527 Transposase 3 76 3.2E-9 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 M892_28350 d5cf655575b1411e9e9a8820a46ddf91 93 SUPERFAMILY SSF46689 4 91 3.94E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_16840 d5cf655575b1411e9e9a8820a46ddf91 93 Pfam PF01527 Transposase 3 76 3.2E-9 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 M892_16840 d5cf655575b1411e9e9a8820a46ddf91 93 SUPERFAMILY SSF46689 4 91 3.94E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_07465 d5cf655575b1411e9e9a8820a46ddf91 93 Pfam PF01527 Transposase 3 76 3.2E-9 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 M892_07465 d5cf655575b1411e9e9a8820a46ddf91 93 SUPERFAMILY SSF46689 4 91 3.94E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_23385 d5cf655575b1411e9e9a8820a46ddf91 93 Pfam PF01527 Transposase 3 76 3.2E-9 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 M892_23385 d5cf655575b1411e9e9a8820a46ddf91 93 SUPERFAMILY SSF46689 4 91 3.94E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_03865 d5cf655575b1411e9e9a8820a46ddf91 93 Pfam PF01527 Transposase 3 76 3.2E-9 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 M892_03865 d5cf655575b1411e9e9a8820a46ddf91 93 SUPERFAMILY SSF46689 4 91 3.94E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_23345 d5cf655575b1411e9e9a8820a46ddf91 93 Pfam PF01527 Transposase 3 76 3.2E-9 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 M892_23345 d5cf655575b1411e9e9a8820a46ddf91 93 SUPERFAMILY SSF46689 4 91 3.94E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_21790 d5cf655575b1411e9e9a8820a46ddf91 93 Pfam PF01527 Transposase 3 76 3.2E-9 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 M892_21790 d5cf655575b1411e9e9a8820a46ddf91 93 SUPERFAMILY SSF46689 4 91 3.94E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_16515 d5cf655575b1411e9e9a8820a46ddf91 93 Pfam PF01527 Transposase 3 76 3.2E-9 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 M892_16515 d5cf655575b1411e9e9a8820a46ddf91 93 SUPERFAMILY SSF46689 4 91 3.94E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_23515 d5cf655575b1411e9e9a8820a46ddf91 93 Pfam PF01527 Transposase 3 76 3.2E-9 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 M892_23515 d5cf655575b1411e9e9a8820a46ddf91 93 SUPERFAMILY SSF46689 4 91 3.94E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_02575 d5cf655575b1411e9e9a8820a46ddf91 93 Pfam PF01527 Transposase 3 76 3.2E-9 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 M892_02575 d5cf655575b1411e9e9a8820a46ddf91 93 SUPERFAMILY SSF46689 4 91 3.94E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_01350 d5cf655575b1411e9e9a8820a46ddf91 93 Pfam PF01527 Transposase 3 76 3.2E-9 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 M892_01350 d5cf655575b1411e9e9a8820a46ddf91 93 SUPERFAMILY SSF46689 4 91 3.94E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_13015 435559dd7626fb649338940ace537563 502 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 497 40.855 T 12-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 M892_13015 435559dd7626fb649338940ace537563 502 SUPERFAMILY SSF52949 1 184 4.71E-52 T 12-10-2018 M892_13015 435559dd7626fb649338940ace537563 502 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 349 356 - T 12-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 M892_13015 435559dd7626fb649338940ace537563 502 Gene3D G3DSA:3.40.630.10 181 497 1.6E-140 T 12-10-2018 M892_13015 435559dd7626fb649338940ace537563 502 SUPERFAMILY SSF53187 179 496 2.2E-124 T 12-10-2018 M892_13015 435559dd7626fb649338940ace537563 502 PRINTS PR00481 Cytosol aminopeptidase signature 345 365 4.8E-55 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 M892_13015 435559dd7626fb649338940ace537563 502 PRINTS PR00481 Cytosol aminopeptidase signature 286 307 4.8E-55 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 M892_13015 435559dd7626fb649338940ace537563 502 PRINTS PR00481 Cytosol aminopeptidase signature 323 344 4.8E-55 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 M892_13015 435559dd7626fb649338940ace537563 502 PRINTS PR00481 Cytosol aminopeptidase signature 264 281 4.8E-55 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 M892_13015 435559dd7626fb649338940ace537563 502 PRINTS PR00481 Cytosol aminopeptidase signature 373 388 4.8E-55 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 M892_13015 435559dd7626fb649338940ace537563 502 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 6.6E-34 T 12-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 M892_13015 435559dd7626fb649338940ace537563 502 Gene3D G3DSA:3.40.220.10 1 159 1.5E-59 T 12-10-2018 M892_13015 435559dd7626fb649338940ace537563 502 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 187 489 2.2E-123 T 12-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 M892_19025 0889c52ff0f148cdfb53d825b5522b3c 132 Gene3D G3DSA:3.30.300.20 35 132 2.2E-23 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta M892_19025 0889c52ff0f148cdfb53d825b5522b3c 132 SUPERFAMILY SSF82784 1 131 8.9E-38 T 12-10-2018 IPR036102 OsmC/Ohr superfamily M892_19025 0889c52ff0f148cdfb53d825b5522b3c 132 Pfam PF02566 OsmC-like protein 29 127 1.7E-17 T 12-10-2018 IPR003718 OsmC/Ohr family M892_19025 0889c52ff0f148cdfb53d825b5522b3c 132 Gene3D G3DSA:2.20.25.10 1 34 2.3E-20 T 12-10-2018 M892_20385 4fbf59610460caff20482ece68c43ca9 287 Gene3D G3DSA:1.10.10.10 3 82 7.0E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_20385 4fbf59610460caff20482ece68c43ca9 287 Pfam PF01380 SIS domain 124 250 1.4E-18 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 M892_20385 4fbf59610460caff20482ece68c43ca9 287 Gene3D G3DSA:3.40.50.10490 94 273 7.3E-40 T 12-10-2018 M892_20385 4fbf59610460caff20482ece68c43ca9 287 SUPERFAMILY SSF46689 5 79 1.63E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_20385 4fbf59610460caff20482ece68c43ca9 287 SUPERFAMILY SSF53697 97 260 1.13E-36 T 12-10-2018 M892_20385 4fbf59610460caff20482ece68c43ca9 287 Pfam PF01418 Helix-turn-helix domain, rpiR family 7 78 8.2E-16 T 12-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 M892_01275 5ff0589ec395c12494eea199daab6ea7 228 Pfam PF12431 Transcriptional regulator 134 162 4.5E-7 T 12-10-2018 IPR028141 Transcriptional regulator M892_01275 5ff0589ec395c12494eea199daab6ea7 228 Gene3D G3DSA:3.40.50.2300 3 150 2.4E-27 T 12-10-2018 M892_01275 5ff0589ec395c12494eea199daab6ea7 228 SUPERFAMILY SSF52172 5 143 7.4E-32 T 12-10-2018 IPR011006 CheY-like superfamily M892_01275 5ff0589ec395c12494eea199daab6ea7 228 PIRSF PIRSF006171 3 228 4.8E-80 T 12-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 M892_01275 5ff0589ec395c12494eea199daab6ea7 228 SMART SM00448 5 118 2.2E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_01275 5ff0589ec395c12494eea199daab6ea7 228 Pfam PF00072 Response regulator receiver domain 7 118 2.5E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_08405 554888cb818953bb93233a79a660b5ff 493 SUPERFAMILY SSF53623 109 336 3.92E-72 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 M892_08405 554888cb818953bb93233a79a660b5ff 493 SUPERFAMILY SSF63418 10 105 1.44E-20 T 12-10-2018 IPR035911 MurE/MurF, N-terminal M892_08405 554888cb818953bb93233a79a660b5ff 493 Gene3D G3DSA:3.90.190.20 340 491 9.4E-53 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 M892_08405 554888cb818953bb93233a79a660b5ff 493 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 5 489 33.341 T 12-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 M892_08405 554888cb818953bb93233a79a660b5ff 493 Gene3D G3DSA:3.40.1190.10 108 339 2.8E-78 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 M892_08405 554888cb818953bb93233a79a660b5ff 493 Gene3D G3DSA:3.40.1390.10 4 106 9.4E-26 T 12-10-2018 M892_08405 554888cb818953bb93233a79a660b5ff 493 Pfam PF08245 Mur ligase middle domain 115 315 3.7E-49 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 M892_08405 554888cb818953bb93233a79a660b5ff 493 SUPERFAMILY SSF53244 338 489 9.31E-47 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 M892_08405 554888cb818953bb93233a79a660b5ff 493 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 25 488 1.9E-166 T 12-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 M892_08405 554888cb818953bb93233a79a660b5ff 493 Pfam PF02875 Mur ligase family, glutamate ligase domain 339 422 2.0E-24 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 M892_08405 554888cb818953bb93233a79a660b5ff 493 Pfam PF01225 Mur ligase family, catalytic domain 26 103 5.5E-11 T 12-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 M892_03845 8ec219492a2fc65997980c38bdcc3e16 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 237 323 1.4E-20 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 M892_03845 8ec219492a2fc65997980c38bdcc3e16 331 SUPERFAMILY SSF52540 3 269 9.49E-51 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_03845 8ec219492a2fc65997980c38bdcc3e16 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 305 5.9E-16 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 M892_03845 8ec219492a2fc65997980c38bdcc3e16 331 Gene3D G3DSA:3.40.50.300 2 331 1.0E-73 T 12-10-2018 M892_03845 8ec219492a2fc65997980c38bdcc3e16 331 SMART SM00382 32 238 1.9E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_03845 8ec219492a2fc65997980c38bdcc3e16 331 Pfam PF00005 ABC transporter 24 187 1.5E-26 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_18930 c432dd1fb3e5c4fa6f2fc0cf83faeda9 477 ProSitePatterns PS00853 Beta-eliminating lyases pyridoxal-phosphate attachment site. 266 284 - T 12-10-2018 IPR018176 Tryptophanase, conserved site KEGG: 00380+4.1.99.1 M892_18930 c432dd1fb3e5c4fa6f2fc0cf83faeda9 477 Pfam PF01212 Beta-eliminating lyase 57 442 5.5E-99 T 12-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 M892_18930 c432dd1fb3e5c4fa6f2fc0cf83faeda9 477 Gene3D G3DSA:3.90.1150.10 17 471 6.5E-209 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M892_18930 c432dd1fb3e5c4fa6f2fc0cf83faeda9 477 SUPERFAMILY SSF53383 13 475 1.35E-144 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M892_18930 c432dd1fb3e5c4fa6f2fc0cf83faeda9 477 Hamap MF_00544 Tryptophanase [tnaA]. 12 476 106.343 T 12-10-2018 IPR013440 Tryptophanase GO:0006568|GO:0009034 KEGG: 00380+4.1.99.1 M892_18930 c432dd1fb3e5c4fa6f2fc0cf83faeda9 477 PIRSF PIRSF001386 11 477 2.4E-228 T 12-10-2018 IPR011166 Beta-eliminating lyase family GO:0009072|GO:0016830 KEGG: 00380+4.1.99.1 M892_18930 c432dd1fb3e5c4fa6f2fc0cf83faeda9 477 Gene3D G3DSA:3.40.640.10 69 337 6.5E-209 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M892_08625 82b2ecb72009aa2f24cf802a13d14316 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 12-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_08625 82b2ecb72009aa2f24cf802a13d14316 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.588 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_08625 82b2ecb72009aa2f24cf802a13d14316 71 Pfam PF01165 Ribosomal protein S21 4 56 4.3E-23 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_08625 82b2ecb72009aa2f24cf802a13d14316 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 44 2.0E-10 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_08625 82b2ecb72009aa2f24cf802a13d14316 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 7.2E-25 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_08625 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.6E-16 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_08625 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.6E-16 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_08625 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.6E-16 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_08625 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.6E-16 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_08625 82b2ecb72009aa2f24cf802a13d14316 71 Gene3D G3DSA:1.20.5.1150 16 54 1.4E-21 T 12-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_10645 130649b7cfa8c4c07de0b80965053701 453 Pfam PF12804 MobA-like NTP transferase domain 5 122 3.7E-22 T 12-10-2018 IPR025877 MobA-like NTP transferase M892_10645 130649b7cfa8c4c07de0b80965053701 453 Gene3D G3DSA:3.90.550.10 1 224 1.0E-65 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M892_10645 130649b7cfa8c4c07de0b80965053701 453 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 400 428 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 M892_10645 130649b7cfa8c4c07de0b80965053701 453 SUPERFAMILY SSF51161 252 434 3.41E-51 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily M892_10645 130649b7cfa8c4c07de0b80965053701 453 SUPERFAMILY SSF53448 1 249 1.13E-62 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M892_10645 130649b7cfa8c4c07de0b80965053701 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 297 330 6.4E-5 T 12-10-2018 IPR001451 Hexapeptide repeat M892_10645 130649b7cfa8c4c07de0b80965053701 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 392 426 8.3E-8 T 12-10-2018 IPR001451 Hexapeptide repeat M892_10645 130649b7cfa8c4c07de0b80965053701 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 265 296 2.0E-7 T 12-10-2018 IPR001451 Hexapeptide repeat M892_10645 130649b7cfa8c4c07de0b80965053701 453 Gene3D G3DSA:2.160.10.10 225 453 5.1E-71 T 12-10-2018 M892_10645 130649b7cfa8c4c07de0b80965053701 453 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 4 451 1.5E-202 T 12-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 M892_10645 130649b7cfa8c4c07de0b80965053701 453 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 449 42.082 T 12-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 M892_06520 24b6f6e3e3c404a2535a922f147aea67 374 Gene3D G3DSA:1.20.58.1830 339 373 4.6E-34 T 12-10-2018 M892_06520 24b6f6e3e3c404a2535a922f147aea67 374 Gene3D G3DSA:1.20.58.1830 5 32 3.4E-58 T 12-10-2018 M892_06520 24b6f6e3e3c404a2535a922f147aea67 374 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 140 2.7E-33 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 M892_06520 24b6f6e3e3c404a2535a922f147aea67 374 Pfam PF07196 Flagellin hook IN motif 200 245 3.1E-6 T 12-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 M892_06520 24b6f6e3e3c404a2535a922f147aea67 374 SUPERFAMILY SSF64518 1 373 2.35E-77 T 12-10-2018 M892_06520 24b6f6e3e3c404a2535a922f147aea67 374 Gene3D G3DSA:1.20.1330.10 282 333 4.6E-34 T 12-10-2018 M892_06520 24b6f6e3e3c404a2535a922f147aea67 374 Gene3D G3DSA:1.20.1330.10 44 165 3.4E-58 T 12-10-2018 M892_06520 24b6f6e3e3c404a2535a922f147aea67 374 PRINTS PR00207 Flagellin signature 36 53 2.8E-21 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 M892_06520 24b6f6e3e3c404a2535a922f147aea67 374 PRINTS PR00207 Flagellin signature 110 133 2.8E-21 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 M892_06520 24b6f6e3e3c404a2535a922f147aea67 374 PRINTS PR00207 Flagellin signature 75 94 2.8E-21 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 M892_06520 24b6f6e3e3c404a2535a922f147aea67 374 Pfam PF00700 Bacterial flagellin C-terminal helical region 289 373 1.1E-20 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 M892_06520 24b6f6e3e3c404a2535a922f147aea67 374 Gene3D G3DSA:2.170.280.10 184 281 4.6E-34 T 12-10-2018 M892_24490 e39c0c31d981fb4b0f96e8289b0bf055 829 Pfam PF01568 Molydopterin dinucleotide binding domain 714 822 3.7E-27 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 M892_24490 e39c0c31d981fb4b0f96e8289b0bf055 829 Hamap MF_01630 Periplasmic nitrate reductase [napA]. 1 828 32.529 T 12-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 M892_24490 e39c0c31d981fb4b0f96e8289b0bf055 829 SUPERFAMILY SSF50692 689 828 2.94E-42 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily M892_24490 e39c0c31d981fb4b0f96e8289b0bf055 829 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 46 63 - T 12-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 M892_24490 e39c0c31d981fb4b0f96e8289b0bf055 829 Pfam PF00384 Molybdopterin oxidoreductase 98 570 5.6E-89 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M892_24490 e39c0c31d981fb4b0f96e8289b0bf055 829 Gene3D G3DSA:3.40.228.10 177 702 0.0 T 12-10-2018 M892_24490 e39c0c31d981fb4b0f96e8289b0bf055 829 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 2 828 0.0 T 12-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 M892_24490 e39c0c31d981fb4b0f96e8289b0bf055 829 Gene3D G3DSA:3.30.200.210 41 666 0.0 T 12-10-2018 M892_24490 e39c0c31d981fb4b0f96e8289b0bf055 829 SUPERFAMILY SSF53706 38 661 5.76E-202 T 12-10-2018 M892_24490 e39c0c31d981fb4b0f96e8289b0bf055 829 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 42 94 1.9E-16 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M892_24490 e39c0c31d981fb4b0f96e8289b0bf055 829 Gene3D G3DSA:3.40.50.740 98 623 0.0 T 12-10-2018 M892_24490 e39c0c31d981fb4b0f96e8289b0bf055 829 Gene3D G3DSA:2.40.40.20 705 828 1.1E-45 T 12-10-2018 M892_24490 e39c0c31d981fb4b0f96e8289b0bf055 829 SMART SM00926 41 95 1.9E-13 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M892_10530 7058f7db14e0fde3aa690c5752856f8d 357 Gene3D G3DSA:1.20.1050.90 121 298 1.4E-82 T 12-10-2018 M892_10530 7058f7db14e0fde3aa690c5752856f8d 357 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 354 1.9E-37 T 12-10-2018 IPR003395 RecF/RecN/SMC, N-terminal M892_10530 7058f7db14e0fde3aa690c5752856f8d 357 ProSitePatterns PS00617 RecF protein signature 1. 118 138 - T 12-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 M892_10530 7058f7db14e0fde3aa690c5752856f8d 357 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 357 98.736 T 12-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 M892_10530 7058f7db14e0fde3aa690c5752856f8d 357 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 356 3.0E-120 T 12-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 M892_10530 7058f7db14e0fde3aa690c5752856f8d 357 ProSitePatterns PS00618 RecF protein signature 2. 299 317 - T 12-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 M892_10530 7058f7db14e0fde3aa690c5752856f8d 357 SUPERFAMILY SSF52540 1 343 1.33E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_10530 7058f7db14e0fde3aa690c5752856f8d 357 Gene3D G3DSA:3.40.50.300 8 332 1.4E-82 T 12-10-2018 M892_25485 3d1010cd9c7497ec05637047980ffc40 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 314 335 3.8E-40 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 M892_25485 3d1010cd9c7497ec05637047980ffc40 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 425 445 3.8E-40 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 M892_25485 3d1010cd9c7497ec05637047980ffc40 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 347 371 3.8E-40 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 M892_25485 3d1010cd9c7497ec05637047980ffc40 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 371 394 3.8E-40 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 M892_25485 3d1010cd9c7497ec05637047980ffc40 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 39 62 3.8E-40 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 M892_25485 3d1010cd9c7497ec05637047980ffc40 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 81 101 3.8E-40 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 M892_25485 3d1010cd9c7497ec05637047980ffc40 446 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 31 446 1.0E-99 T 12-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 M892_25485 3d1010cd9c7497ec05637047980ffc40 446 SUPERFAMILY SSF111369 72 128 4.32E-5 T 12-10-2018 M892_25485 3d1010cd9c7497ec05637047980ffc40 446 Gene3D G3DSA:2.40.50.100 76 122 3.9E-6 T 12-10-2018 M892_25485 3d1010cd9c7497ec05637047980ffc40 446 Pfam PF13437 HlyD family secretion protein 302 408 2.4E-17 T 12-10-2018 M892_25485 3d1010cd9c7497ec05637047980ffc40 446 Gene3D G3DSA:2.40.50.100 302 338 3.7E-16 T 12-10-2018 M892_25485 3d1010cd9c7497ec05637047980ffc40 446 Pfam PF13533 Biotin-lipoyl like 79 112 9.9E-7 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain M892_25485 3d1010cd9c7497ec05637047980ffc40 446 Gene3D G3DSA:2.40.30.170 339 422 3.7E-16 T 12-10-2018 M892_25485 3d1010cd9c7497ec05637047980ffc40 446 Gene3D G3DSA:1.10.287.470 224 301 3.7E-16 T 12-10-2018 M892_20705 782053e6b808e9bdc44f5214aa361102 340 Gene3D G3DSA:1.10.760.10 217 340 2.8E-30 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M892_20705 782053e6b808e9bdc44f5214aa361102 340 SUPERFAMILY SSF49503 74 213 3.17E-53 T 12-10-2018 IPR008972 Cupredoxin M892_20705 782053e6b808e9bdc44f5214aa361102 340 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 3 208 1.8E-58 T 12-10-2018 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_20705 782053e6b808e9bdc44f5214aa361102 340 Gene3D G3DSA:2.60.40.420 72 208 4.4E-80 T 12-10-2018 IPR008972 Cupredoxin M892_20705 782053e6b808e9bdc44f5214aa361102 340 PRINTS PR01166 Cytochrome c oxidase subunit II signature 50 70 1.1E-40 T 12-10-2018 M892_20705 782053e6b808e9bdc44f5214aa361102 340 PRINTS PR01166 Cytochrome c oxidase subunit II signature 72 91 1.1E-40 T 12-10-2018 M892_20705 782053e6b808e9bdc44f5214aa361102 340 PRINTS PR01166 Cytochrome c oxidase subunit II signature 163 180 1.1E-40 T 12-10-2018 M892_20705 782053e6b808e9bdc44f5214aa361102 340 PRINTS PR01166 Cytochrome c oxidase subunit II signature 181 198 1.1E-40 T 12-10-2018 M892_20705 782053e6b808e9bdc44f5214aa361102 340 PRINTS PR01166 Cytochrome c oxidase subunit II signature 143 163 1.1E-40 T 12-10-2018 M892_20705 782053e6b808e9bdc44f5214aa361102 340 PRINTS PR01166 Cytochrome c oxidase subunit II signature 119 140 1.1E-40 T 12-10-2018 M892_20705 782053e6b808e9bdc44f5214aa361102 340 PRINTS PR01166 Cytochrome c oxidase subunit II signature 38 50 1.1E-40 T 12-10-2018 M892_20705 782053e6b808e9bdc44f5214aa361102 340 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 76 198 4.7E-36 T 12-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_20705 782053e6b808e9bdc44f5214aa361102 340 SUPERFAMILY SSF81464 2 70 1.96E-21 T 12-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_20705 782053e6b808e9bdc44f5214aa361102 340 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 144 192 - T 12-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_20705 782053e6b808e9bdc44f5214aa361102 340 Gene3D G3DSA:1.10.287.90 2 71 4.4E-80 T 12-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_20705 782053e6b808e9bdc44f5214aa361102 340 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 236 309 6.1E-11 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_20705 782053e6b808e9bdc44f5214aa361102 340 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 3 61 5.4E-12 T 12-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_20705 782053e6b808e9bdc44f5214aa361102 340 SUPERFAMILY SSF46626 178 320 3.73E-26 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M892_25235 bb531fe9fbc9d13814edde31ad6f89d2 372 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_25235 bb531fe9fbc9d13814edde31ad6f89d2 372 SMART SM00382 28 210 2.9E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_25235 bb531fe9fbc9d13814edde31ad6f89d2 372 SUPERFAMILY SSF50331 236 364 1.19E-29 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal M892_25235 bb531fe9fbc9d13814edde31ad6f89d2 372 Gene3D G3DSA:2.40.50.140 287 344 4.9E-49 T 12-10-2018 M892_25235 bb531fe9fbc9d13814edde31ad6f89d2 372 Pfam PF00005 ABC transporter 20 161 1.4E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_25235 bb531fe9fbc9d13814edde31ad6f89d2 372 Gene3D G3DSA:3.40.50.300 1 238 2.4E-75 T 12-10-2018 M892_25235 bb531fe9fbc9d13814edde31ad6f89d2 372 Pfam PF08402 TOBE domain 281 353 2.8E-10 T 12-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 M892_25235 bb531fe9fbc9d13814edde31ad6f89d2 372 Gene3D G3DSA:2.40.50.100 239 361 4.9E-49 T 12-10-2018 M892_25235 bb531fe9fbc9d13814edde31ad6f89d2 372 SUPERFAMILY SSF52540 4 244 2.08E-85 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_08600 1cde3c3dc6ed5b8d6a9c705d3d3ce5b2 160 SUPERFAMILY SSF55083 4 148 2.62E-37 T 12-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 M892_08600 1cde3c3dc6ed5b8d6a9c705d3d3ce5b2 160 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 129 5.1E-23 T 12-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 M892_08600 1cde3c3dc6ed5b8d6a9c705d3d3ce5b2 160 Gene3D G3DSA:3.30.70.560 1 153 8.1E-32 T 12-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 M892_08600 1cde3c3dc6ed5b8d6a9c705d3d3ce5b2 160 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 5 129 6.9E-27 T 12-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 M892_03085 e8e05b78fe8ddb41240a33a029c177ff 557 SUPERFAMILY SSF56300 136 532 2.02E-30 T 12-10-2018 M892_03085 e8e05b78fe8ddb41240a33a029c177ff 557 Gene3D G3DSA:3.60.21.70 129 553 1.2E-120 T 12-10-2018 IPR038607 PhoD-like superfamily M892_03085 e8e05b78fe8ddb41240a33a029c177ff 557 Gene3D G3DSA:2.60.40.380 29 128 6.0E-32 T 12-10-2018 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 M892_03085 e8e05b78fe8ddb41240a33a029c177ff 557 Pfam PF09423 PhoD-like phosphatase 137 528 7.5E-116 T 12-10-2018 IPR018946 Alkaline phosphatase D-related M892_03085 e8e05b78fe8ddb41240a33a029c177ff 557 Pfam PF16655 PhoD-like phosphatase, N-terminal domain 39 126 7.7E-29 T 12-10-2018 IPR032093 Phospholipase D, N-terminal M892_24905 1f0a2c5a8fed8a031a46fcb03e336ea5 320 SUPERFAMILY SSF46689 268 318 1.52E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_24905 1f0a2c5a8fed8a031a46fcb03e336ea5 320 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 269 311 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 M892_24905 1f0a2c5a8fed8a031a46fcb03e336ea5 320 Gene3D G3DSA:1.10.10.60 266 319 1.1E-14 T 12-10-2018 M892_24905 1f0a2c5a8fed8a031a46fcb03e336ea5 320 Pfam PF01965 DJ-1/PfpI family 68 177 3.7E-12 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 M892_24905 1f0a2c5a8fed8a031a46fcb03e336ea5 320 Gene3D G3DSA:3.40.50.880 12 204 1.9E-38 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M892_24905 1f0a2c5a8fed8a031a46fcb03e336ea5 320 SMART SM00342 232 315 6.6E-24 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M892_24905 1f0a2c5a8fed8a031a46fcb03e336ea5 320 SUPERFAMILY SSF52317 19 195 2.61E-31 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M892_24905 1f0a2c5a8fed8a031a46fcb03e336ea5 320 Gene3D G3DSA:1.10.10.60 210 265 4.3E-9 T 12-10-2018 M892_24905 1f0a2c5a8fed8a031a46fcb03e336ea5 320 SUPERFAMILY SSF46689 217 266 3.09E-5 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_24905 1f0a2c5a8fed8a031a46fcb03e336ea5 320 Pfam PF12833 Helix-turn-helix domain 239 317 5.4E-20 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M892_00175 a60d83191e125da714a061f879cdc524 496 Pfam PF00916 Sulfate permease family 151 347 7.2E-31 T 12-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 M892_00175 a60d83191e125da714a061f879cdc524 496 Pfam PF00916 Sulfate permease family 14 143 2.7E-26 T 12-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 M892_00175 a60d83191e125da714a061f879cdc524 496 Pfam PF01740 STAS domain 400 486 1.1E-7 T 12-10-2018 IPR002645 STAS domain M892_00175 a60d83191e125da714a061f879cdc524 496 SUPERFAMILY SSF52091 393 483 1.41E-12 T 12-10-2018 IPR036513 STAS domain superfamily M892_00175 a60d83191e125da714a061f879cdc524 496 Gene3D G3DSA:3.30.750.24 386 484 4.0E-24 T 12-10-2018 IPR036513 STAS domain superfamily M892_18375 6896f50d130a667a90cd778c7ac5c3e2 222 SUPERFAMILY SSF48613 3 216 4.85E-68 T 12-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 M892_18375 6896f50d130a667a90cd778c7ac5c3e2 222 Gene3D G3DSA:1.20.910.10 2 221 2.4E-63 T 12-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 M892_18375 6896f50d130a667a90cd778c7ac5c3e2 222 TIGRFAM TIGR04306 salvage_TenA: thiaminase II 12 216 7.4E-41 T 12-10-2018 IPR027574 Thiaminase II GO:0006772|GO:0050334 KEGG: 00730+3.5.99.2|MetaCyc: PWY-6899|MetaCyc: PWY-7356 M892_18375 6896f50d130a667a90cd778c7ac5c3e2 222 Pfam PF03070 TENA/THI-4/PQQC family 9 217 4.2E-45 T 12-10-2018 IPR004305 Thiaminase-2/PQQC M892_02585 6bcab63d56ad39831220db9e512ab01b 192 Gene3D G3DSA:3.30.2010.10 94 184 9.4E-6 T 12-10-2018 M892_02585 6bcab63d56ad39831220db9e512ab01b 192 Pfam PF01863 Protein of unknown function DUF45 92 171 1.7E-10 T 12-10-2018 IPR002725 Protein of unknown function DUF45 M892_06210 e185dbd535c68cb1c23b3320d838e600 75 SMART SM00899 1 74 6.7E-23 T 12-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 M892_06210 e185dbd535c68cb1c23b3320d838e600 75 Gene3D G3DSA:2.30.30.90 1 75 2.3E-23 T 12-10-2018 IPR038157 Ferrous iron transporter, core domain M892_06210 e185dbd535c68cb1c23b3320d838e600 75 Pfam PF04023 FeoA domain 1 74 1.1E-18 T 12-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 M892_06210 e185dbd535c68cb1c23b3320d838e600 75 SUPERFAMILY SSF50037 4 74 3.43E-18 T 12-10-2018 IPR008988 Transcriptional repressor, C-terminal M892_23415 33dc2797a9be31b32ebf5711cb50353e 173 Gene3D G3DSA:3.40.630.30 1 152 1.2E-22 T 12-10-2018 M892_23415 33dc2797a9be31b32ebf5711cb50353e 173 SUPERFAMILY SSF55729 9 125 6.25E-24 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_23415 33dc2797a9be31b32ebf5711cb50353e 173 Pfam PF13527 Acetyltransferase (GNAT) domain 8 123 2.4E-14 T 12-10-2018 M892_01605 be981773dfe0e79da810c3daa5dc2e7b 160 Gene3D G3DSA:3.30.70.990 9 94 1.2E-27 T 12-10-2018 IPR035570 UPF0234, N-terminal M892_01605 be981773dfe0e79da810c3daa5dc2e7b 160 SUPERFAMILY SSF89963 88 160 1.33E-28 T 12-10-2018 IPR036183 YajQ-like superfamily M892_01605 be981773dfe0e79da810c3daa5dc2e7b 160 SUPERFAMILY SSF89963 2 86 7.85E-31 T 12-10-2018 IPR036183 YajQ-like superfamily M892_01605 be981773dfe0e79da810c3daa5dc2e7b 160 Gene3D G3DSA:3.30.70.860 95 160 2.9E-30 T 12-10-2018 IPR035571 UPF0234-like, C-terminal M892_01605 be981773dfe0e79da810c3daa5dc2e7b 160 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 160 29.699 T 12-10-2018 IPR007551 Protein of unknown function DUF520 M892_01605 be981773dfe0e79da810c3daa5dc2e7b 160 Pfam PF04461 Protein of unknown function (DUF520) 2 159 3.0E-65 T 12-10-2018 IPR007551 Protein of unknown function DUF520 M892_10155 341c51ef6165c6a7f70b6fe6a8645ba8 292 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 11 274 4.9E-70 T 12-10-2018 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 M892_10155 341c51ef6165c6a7f70b6fe6a8645ba8 292 Pfam PF00892 EamA-like transporter family 138 275 7.8E-7 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M892_10155 341c51ef6165c6a7f70b6fe6a8645ba8 292 SUPERFAMILY SSF103481 184 276 6.28E-6 T 12-10-2018 M892_10155 341c51ef6165c6a7f70b6fe6a8645ba8 292 SUPERFAMILY SSF103481 35 131 1.96E-5 T 12-10-2018 M892_22290 9d31b6c2562e15899cf2b2ec261eb910 346 SUPERFAMILY SSF46689 15 131 1.19E-24 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_22290 9d31b6c2562e15899cf2b2ec261eb910 346 Pfam PF13592 Winged helix-turn helix 98 154 2.3E-21 T 12-10-2018 IPR025959 Winged helix-turn helix domain M892_22290 9d31b6c2562e15899cf2b2ec261eb910 346 Gene3D G3DSA:3.30.420.470 136 342 1.7E-13 T 12-10-2018 M892_22290 9d31b6c2562e15899cf2b2ec261eb910 346 SUPERFAMILY SSF53098 223 306 7.28E-7 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_22290 9d31b6c2562e15899cf2b2ec261eb910 346 Pfam PF13358 DDE superfamily endonuclease 167 309 3.3E-35 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_22290 9d31b6c2562e15899cf2b2ec261eb910 346 Pfam PF13551 Winged helix-turn helix 32 85 3.4E-7 T 12-10-2018 M892_13630 d918a9a14a30b7caebcf6a0429b85afa 85 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 10 80 4.5E-18 T 12-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 M892_13630 d918a9a14a30b7caebcf6a0429b85afa 85 Hamap MF_00404 Probable oxaloacetate decarboxylase gamma chain [oadG]. 1 85 33.881 T 12-10-2018 IPR023424 Oxaloacetate decarboxylase gamma chain, probable GO:0008948 KEGG: 00620+4.1.1.3 M892_13630 d918a9a14a30b7caebcf6a0429b85afa 85 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 5 81 9.1E-19 T 12-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 M892_04415 b11fa999a148cfa477cb79557c000bb7 111 Gene3D G3DSA:2.30.30.40 41 111 1.6E-27 T 12-10-2018 M892_04415 b11fa999a148cfa477cb79557c000bb7 111 Pfam PF03831 PhnA domain 43 111 1.4E-26 T 12-10-2018 IPR013988 PhnA protein, C-terminal M892_04415 b11fa999a148cfa477cb79557c000bb7 111 SUPERFAMILY SSF57783 1 37 1.53E-13 T 12-10-2018 M892_04415 b11fa999a148cfa477cb79557c000bb7 111 Gene3D G3DSA:2.20.25.10 1 40 3.5E-17 T 12-10-2018 M892_04415 b11fa999a148cfa477cb79557c000bb7 111 SUPERFAMILY SSF82057 37 111 1.65E-24 T 12-10-2018 M892_04415 b11fa999a148cfa477cb79557c000bb7 111 Pfam PF08274 PhnA Zinc-Ribbon 2 30 6.5E-14 T 12-10-2018 IPR013987 PhnA protein, N-terminal M892_04415 b11fa999a148cfa477cb79557c000bb7 111 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 2 111 5.7E-41 T 12-10-2018 IPR004624 PhnA protein M892_05225 ceb32b7fee36bcfcdc96e2c341ea47b4 196 Pfam PF04993 TfoX N-terminal domain 12 103 1.7E-30 T 12-10-2018 IPR007076 TfoX, N-terminal M892_05225 ceb32b7fee36bcfcdc96e2c341ea47b4 196 Gene3D G3DSA:1.10.150.20 114 195 1.0E-22 T 12-10-2018 M892_05225 ceb32b7fee36bcfcdc96e2c341ea47b4 196 SUPERFAMILY SSF159894 5 104 2.35E-31 T 12-10-2018 M892_05225 ceb32b7fee36bcfcdc96e2c341ea47b4 196 Gene3D G3DSA:3.30.1460.30 1 105 4.2E-38 T 12-10-2018 M892_05225 ceb32b7fee36bcfcdc96e2c341ea47b4 196 Pfam PF04994 TfoX C-terminal domain 115 194 6.4E-31 T 12-10-2018 IPR007077 TfoX, C-terminal M892_05225 ceb32b7fee36bcfcdc96e2c341ea47b4 196 PIRSF PIRSF028788 1 196 1.6E-50 T 12-10-2018 IPR026256 Transcriptional regulator, TfoX/Sxy-type M892_13085 fae8eefc12490f23f492b4934380593c 251 SUPERFAMILY SSF88713 1 242 3.33E-67 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 M892_13085 fae8eefc12490f23f492b4934380593c 251 Pfam PF04794 YdjC-like protein 2 230 5.8E-52 T 12-10-2018 IPR006879 Carbohydrate deacetylase YdjC-like M892_13085 fae8eefc12490f23f492b4934380593c 251 Gene3D G3DSA:3.20.20.370 1 243 4.9E-71 T 12-10-2018 M892_13085 fae8eefc12490f23f492b4934380593c 251 Hamap MF_01246 Chitooligosaccharide deacetylase [chbG]. 1 239 38.84 T 12-10-2018 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria GO:0000272|GO:0016811 M892_21640 7a8763873851c22417e642b88f553157 220 SUPERFAMILY SSF56784 1 200 9.13E-30 T 12-10-2018 IPR036412 HAD-like superfamily M892_21640 7a8763873851c22417e642b88f553157 220 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 181 1.6E-17 T 12-10-2018 M892_21640 7a8763873851c22417e642b88f553157 220 Gene3D G3DSA:3.40.50.1000 68 209 5.0E-26 T 12-10-2018 IPR023214 HAD superfamily M892_21640 7a8763873851c22417e642b88f553157 220 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 90 180 7.7E-7 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M892_19135 e56f4320a6e04d85746fdf879b0417b6 290 Pfam PF01734 Patatin-like phospholipase 7 170 1.1E-13 T 12-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 M892_19135 e56f4320a6e04d85746fdf879b0417b6 290 SUPERFAMILY SSF52151 4 242 2.88E-33 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase M892_19135 e56f4320a6e04d85746fdf879b0417b6 290 Gene3D G3DSA:3.40.1090.10 2 92 7.0E-10 T 12-10-2018 M892_23175 77f770eaa7d5c8348e2def4755357aaa 169 Pfam PF13302 Acetyltransferase (GNAT) domain 8 148 3.1E-27 T 12-10-2018 IPR000182 GNAT domain M892_23175 77f770eaa7d5c8348e2def4755357aaa 169 SUPERFAMILY SSF55729 2 153 4.66E-37 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_23175 77f770eaa7d5c8348e2def4755357aaa 169 Gene3D G3DSA:3.40.630.30 1 166 2.1E-39 T 12-10-2018 M892_23365 7a4f6ce8aadb5e032542c2f39fdff08d 1018 Gene3D G3DSA:3.40.50.300 1 304 2.6E-42 T 12-10-2018 M892_23365 7a4f6ce8aadb5e032542c2f39fdff08d 1018 Pfam PF13555 P-loop containing region of AAA domain 12 56 1.2E-6 T 12-10-2018 M892_23365 7a4f6ce8aadb5e032542c2f39fdff08d 1018 SUPERFAMILY SSF52540 1 1000 2.53E-35 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_23365 7a4f6ce8aadb5e032542c2f39fdff08d 1018 SUPERFAMILY SSF57997 527 772 2.48E-5 T 12-10-2018 M892_23365 7a4f6ce8aadb5e032542c2f39fdff08d 1018 Gene3D G3DSA:3.40.50.300 739 1012 4.3E-26 T 12-10-2018 M892_23365 7a4f6ce8aadb5e032542c2f39fdff08d 1018 Pfam PF13558 Putative exonuclease SbcCD, C subunit 910 971 4.3E-12 T 12-10-2018 M892_28585 f0011b622b36d572e3c33b14f4883b16 328 Gene3D G3DSA:1.20.5.340 180 274 1.3E-5 T 12-10-2018 M892_10090 2e3e443f0c2ee2331ce959383551ab95 859 Gene3D G3DSA:3.90.540.10 725 858 7.1E-55 T 12-10-2018 IPR037146 Colicin/pyocin, DNase domain superfamily GO:0004519 M892_10090 2e3e443f0c2ee2331ce959383551ab95 859 SUPERFAMILY SSF54060 726 855 1.35E-48 T 12-10-2018 M892_10090 2e3e443f0c2ee2331ce959383551ab95 859 SMART SM00257 358 404 8.3E-8 T 12-10-2018 IPR018392 LysM domain M892_10090 2e3e443f0c2ee2331ce959383551ab95 859 Gene3D G3DSA:3.10.350.10 344 417 2.1E-8 T 12-10-2018 IPR036779 LysM domain superfamily M892_10090 2e3e443f0c2ee2331ce959383551ab95 859 SUPERFAMILY SSF69369 551 753 7.72E-32 T 12-10-2018 IPR036302 Pyosin/cloacin translocation domain superfamily GO:0009405 M892_10090 2e3e443f0c2ee2331ce959383551ab95 859 SUPERFAMILY SSF54106 358 403 1.2E-5 T 12-10-2018 M892_10090 2e3e443f0c2ee2331ce959383551ab95 859 Pfam PF01476 LysM domain 359 403 3.5E-5 T 12-10-2018 IPR018392 LysM domain M892_10090 2e3e443f0c2ee2331ce959383551ab95 859 Pfam PF06958 S-type Pyocin 590 723 1.1E-30 T 12-10-2018 IPR016128 Pyosin/cloacin translocation domain GO:0009405 M892_02345 c6727af58112867b37f3c7f184382f01 300 SUPERFAMILY SSF103481 197 270 1.16E-5 T 12-10-2018 M892_02345 c6727af58112867b37f3c7f184382f01 300 SUPERFAMILY SSF103481 41 123 6.8E-8 T 12-10-2018 M892_02345 c6727af58112867b37f3c7f184382f01 300 Pfam PF00892 EamA-like transporter family 3 124 3.9E-15 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M892_02345 c6727af58112867b37f3c7f184382f01 300 Pfam PF00892 EamA-like transporter family 139 275 5.3E-11 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M892_27685 33e921e7b07227077d796b06919d740f 217 SUPERFAMILY SSF51161 61 211 1.32E-38 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily M892_27685 33e921e7b07227077d796b06919d740f 217 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 118 153 1.7E-11 T 12-10-2018 IPR001451 Hexapeptide repeat M892_27685 33e921e7b07227077d796b06919d740f 217 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 127 155 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 M892_27685 33e921e7b07227077d796b06919d740f 217 Gene3D G3DSA:2.160.10.10 1 216 1.3E-63 T 12-10-2018 M892_12425 eb0608321fb2a15ac7c756120bfe20f3 624 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 M892_12425 eb0608321fb2a15ac7c756120bfe20f3 624 Pfam PF00206 Lyase 6 301 3.8E-87 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal M892_12425 eb0608321fb2a15ac7c756120bfe20f3 624 PIRSF PIRSF036456 1 624 0.0 T 12-10-2018 IPR011244 Bifunctional argininosuccinate lyase/acetyltransferase GO:0004056|GO:0005737|GO:0006526|GO:0016746 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 M892_12425 eb0608321fb2a15ac7c756120bfe20f3 624 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 9.3E-68 T 12-10-2018 M892_12425 eb0608321fb2a15ac7c756120bfe20f3 624 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 9.3E-68 T 12-10-2018 M892_12425 eb0608321fb2a15ac7c756120bfe20f3 624 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 9.3E-68 T 12-10-2018 M892_12425 eb0608321fb2a15ac7c756120bfe20f3 624 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 9.3E-68 T 12-10-2018 M892_12425 eb0608321fb2a15ac7c756120bfe20f3 624 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 9.3E-68 T 12-10-2018 M892_12425 eb0608321fb2a15ac7c756120bfe20f3 624 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 9.3E-68 T 12-10-2018 M892_12425 eb0608321fb2a15ac7c756120bfe20f3 624 Gene3D G3DSA:3.40.630.30 463 604 2.1E-25 T 12-10-2018 M892_12425 eb0608321fb2a15ac7c756120bfe20f3 624 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 454 40.181 T 12-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 M892_12425 eb0608321fb2a15ac7c756120bfe20f3 624 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 3.2E-23 T 12-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 M892_12425 eb0608321fb2a15ac7c756120bfe20f3 624 Pfam PF00583 Acetyltransferase (GNAT) family 501 568 8.7E-9 T 12-10-2018 IPR000182 GNAT domain M892_12425 eb0608321fb2a15ac7c756120bfe20f3 624 Gene3D G3DSA:1.10.275.10 1 107 7.4E-36 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal M892_12425 eb0608321fb2a15ac7c756120bfe20f3 624 Gene3D G3DSA:1.20.200.10 108 446 5.0E-146 T 12-10-2018 M892_12425 eb0608321fb2a15ac7c756120bfe20f3 624 SUPERFAMILY SSF55729 466 584 1.57E-15 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_12425 eb0608321fb2a15ac7c756120bfe20f3 624 Gene3D G3DSA:1.10.40.30 363 433 5.0E-146 T 12-10-2018 M892_12425 eb0608321fb2a15ac7c756120bfe20f3 624 SUPERFAMILY SSF48557 3 456 4.08E-140 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 M892_12425 eb0608321fb2a15ac7c756120bfe20f3 624 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 456 2.4E-201 T 12-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 M892_12425 eb0608321fb2a15ac7c756120bfe20f3 624 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 5.5E-28 T 12-10-2018 IPR000362 Fumarate lyase family M892_12425 eb0608321fb2a15ac7c756120bfe20f3 624 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 5.5E-28 T 12-10-2018 IPR000362 Fumarate lyase family M892_12425 eb0608321fb2a15ac7c756120bfe20f3 624 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 5.5E-28 T 12-10-2018 IPR000362 Fumarate lyase family M892_12425 eb0608321fb2a15ac7c756120bfe20f3 624 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 5.5E-28 T 12-10-2018 IPR000362 Fumarate lyase family M892_25545 54e27949a1294ed8479fe782b4f928cb 603 SUPERFAMILY SSF48452 346 446 1.41E-13 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_25545 54e27949a1294ed8479fe782b4f928cb 603 SMART SM00327 84 284 4.4E-7 T 12-10-2018 IPR002035 von Willebrand factor, type A M892_25545 54e27949a1294ed8479fe782b4f928cb 603 SMART SM00028 397 430 0.0033 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_25545 54e27949a1294ed8479fe782b4f928cb 603 Gene3D G3DSA:3.40.50.410 84 284 9.9E-34 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily M892_25545 54e27949a1294ed8479fe782b4f928cb 603 SUPERFAMILY SSF53300 87 271 1.29E-19 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily M892_25545 54e27949a1294ed8479fe782b4f928cb 603 Gene3D G3DSA:1.25.40.10 338 457 8.6E-11 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_25545 54e27949a1294ed8479fe782b4f928cb 603 Pfam PF13519 von Willebrand factor type A domain 88 193 6.8E-14 T 12-10-2018 IPR002035 von Willebrand factor, type A M892_08185 4aa1e1a8c8c32ebd8a2dac0593e4614e 295 Gene3D G3DSA:3.20.20.150 10 293 3.2E-113 T 12-10-2018 M892_08185 4aa1e1a8c8c32ebd8a2dac0593e4614e 295 Hamap MF_00152 Probable endonuclease 4 [nfo]. 11 288 42.708 T 12-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 M892_08185 4aa1e1a8c8c32ebd8a2dac0593e4614e 295 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 184 191 - T 12-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 M892_08185 4aa1e1a8c8c32ebd8a2dac0593e4614e 295 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 78 86 - T 12-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 M892_08185 4aa1e1a8c8c32ebd8a2dac0593e4614e 295 SMART SM00518 12 288 3.9E-125 T 12-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 M892_08185 4aa1e1a8c8c32ebd8a2dac0593e4614e 295 SUPERFAMILY SSF51658 12 287 1.7E-100 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily M892_08185 4aa1e1a8c8c32ebd8a2dac0593e4614e 295 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 224 240 - T 12-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 M892_08185 4aa1e1a8c8c32ebd8a2dac0593e4614e 295 Pfam PF01261 Xylose isomerase-like TIM barrel 29 248 9.7E-43 T 12-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain M892_08185 4aa1e1a8c8c32ebd8a2dac0593e4614e 295 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 12 286 3.9E-108 T 12-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 M892_26955 da8d6c8078bbef9931130ea65807846c 539 Pfam PF04231 Endonuclease I 295 531 8.8E-102 T 12-10-2018 IPR007346 Endonuclease I GO:0004518 M892_26955 da8d6c8078bbef9931130ea65807846c 539 SUPERFAMILY SSF54060 292 531 1.41E-50 T 12-10-2018 M892_26955 da8d6c8078bbef9931130ea65807846c 539 SUPERFAMILY SSF49785 23 161 2.72E-23 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily M892_26955 da8d6c8078bbef9931130ea65807846c 539 Pfam PF02018 Carbohydrate binding domain 23 138 3.5E-8 T 12-10-2018 IPR003305 Carbohydrate-binding, CenC-like GO:0016798 M892_26955 da8d6c8078bbef9931130ea65807846c 539 Gene3D G3DSA:2.60.120.260 23 162 2.1E-12 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily M892_20275 46c0d9524e10f9062f11640f216c202f 367 Pfam PF08388 Group II intron, maturase-specific domain 225 293 1.3E-14 T 12-10-2018 IPR013597 Group II intron, maturase-specific M892_20275 46c0d9524e10f9062f11640f216c202f 367 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 1 287 2.1E-103 T 12-10-2018 IPR030931 Group II intron reverse transcriptase/maturase M892_20275 46c0d9524e10f9062f11640f216c202f 367 SUPERFAMILY SSF56672 2 297 1.61E-47 T 12-10-2018 M892_20275 46c0d9524e10f9062f11640f216c202f 367 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 3 209 1.9E-42 T 12-10-2018 IPR000477 Reverse transcriptase domain M892_19925 daa16c711834a9fb4f8d907cf1935289 289 SUPERFAMILY SSF55136 138 286 2.88E-26 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily M892_19925 daa16c711834a9fb4f8d907cf1935289 289 Gene3D G3DSA:3.20.80.10 138 287 5.5E-28 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily M892_19925 daa16c711834a9fb4f8d907cf1935289 289 Gene3D G3DSA:1.10.10.60 57 112 1.9E-17 T 12-10-2018 M892_19925 daa16c711834a9fb4f8d907cf1935289 289 SUPERFAMILY SSF46689 7 57 8.96E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_19925 daa16c711834a9fb4f8d907cf1935289 289 SMART SM00342 23 107 3.5E-31 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M892_19925 daa16c711834a9fb4f8d907cf1935289 289 SMART SM00871 137 287 1.5E-17 T 12-10-2018 IPR010499 Bacterial transcription activator, effector binding M892_19925 daa16c711834a9fb4f8d907cf1935289 289 SUPERFAMILY SSF46689 60 110 8.06E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_19925 daa16c711834a9fb4f8d907cf1935289 289 Pfam PF12833 Helix-turn-helix domain 29 108 2.8E-25 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M892_19925 daa16c711834a9fb4f8d907cf1935289 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 76 91 2.6E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 M892_19925 daa16c711834a9fb4f8d907cf1935289 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 91 107 2.6E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 M892_19925 daa16c711834a9fb4f8d907cf1935289 289 Gene3D G3DSA:1.10.10.60 1 56 4.2E-15 T 12-10-2018 M892_19925 daa16c711834a9fb4f8d907cf1935289 289 Pfam PF06445 GyrI-like small molecule binding domain 138 286 6.7E-28 T 12-10-2018 IPR029442 GyrI-like small molecule binding domain M892_19925 daa16c711834a9fb4f8d907cf1935289 289 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 60 103 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 M892_04185 07b18650d8869df4eec30673a18b73f1 1120 Gene3D G3DSA:3.40.50.300 732 1034 1.1E-117 T 12-10-2018 M892_04185 07b18650d8869df4eec30673a18b73f1 1120 Gene3D G3DSA:1.10.10.10 1046 1113 3.2E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_04185 07b18650d8869df4eec30673a18b73f1 1120 SUPERFAMILY SSF46785 1052 1117 4.63E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_04185 07b18650d8869df4eec30673a18b73f1 1120 SUPERFAMILY SSF52540 709 1021 4.78E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_04185 07b18650d8869df4eec30673a18b73f1 1120 Gene3D G3DSA:3.30.980.40 627 731 1.3E-32 T 12-10-2018 M892_04185 07b18650d8869df4eec30673a18b73f1 1120 Pfam PF01580 FtsK/SpoIIIE family 735 948 1.9E-68 T 12-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 M892_04185 07b18650d8869df4eec30673a18b73f1 1120 Pfam PF09397 Ftsk gamma domain 1054 1114 9.6E-26 T 12-10-2018 IPR018541 FtsK gamma domain M892_04185 07b18650d8869df4eec30673a18b73f1 1120 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 29 199 1.4E-41 T 12-10-2018 IPR025199 DNA translocase FtsK, 4TM region M892_04185 07b18650d8869df4eec30673a18b73f1 1120 SMART SM00843 1052 1117 4.3E-38 T 12-10-2018 IPR018541 FtsK gamma domain M892_27265 dc9c75c4f9cf211b014c740df7282219 361 SMART SM00283 41 282 8.1E-18 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M892_27265 dc9c75c4f9cf211b014c740df7282219 361 Pfam PF13682 Chemoreceptor zinc-binding domain 258 321 9.9E-15 T 12-10-2018 IPR025991 Chemoreceptor zinc-binding domain M892_27265 dc9c75c4f9cf211b014c740df7282219 361 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 168 197 1.3E-8 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M892_27265 dc9c75c4f9cf211b014c740df7282219 361 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 216 245 1.3E-8 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M892_27265 dc9c75c4f9cf211b014c740df7282219 361 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 69 98 1.3E-8 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M892_27265 dc9c75c4f9cf211b014c740df7282219 361 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 108 241 1.2E-30 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M892_27265 dc9c75c4f9cf211b014c740df7282219 361 Gene3D G3DSA:1.10.287.950 4 256 1.0E-43 T 12-10-2018 M892_27265 dc9c75c4f9cf211b014c740df7282219 361 SUPERFAMILY SSF58104 31 243 3.4E-42 T 12-10-2018 M892_25790 3d9e374f60624873e60606483df887ab 194 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 88 94 - T 12-10-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 Reactome: R-HSA-9033241 M892_25790 3d9e374f60624873e60606483df887ab 194 Gene3D G3DSA:3.20.20.70 12 193 5.0E-65 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M892_25790 3d9e374f60624873e60606483df887ab 194 Pfam PF01070 FMN-dependent dehydrogenase 11 190 3.7E-66 T 12-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 M892_25790 3d9e374f60624873e60606483df887ab 194 SUPERFAMILY SSF51395 35 190 2.56E-51 T 12-10-2018 M892_23870 3b06606afc3122b7e037e6a6d6512e5a 190 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 61 89 - T 12-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 M892_23870 3b06606afc3122b7e037e6a6d6512e5a 190 Gene3D G3DSA:2.60.130.10 4 189 2.6E-44 T 12-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 M892_23870 3b06606afc3122b7e037e6a6d6512e5a 190 Pfam PF00775 Dioxygenase 32 156 6.1E-22 T 12-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 M892_23870 3b06606afc3122b7e037e6a6d6512e5a 190 SUPERFAMILY SSF49482 18 189 5.63E-47 T 12-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 M892_02680 a2030830d550a014e0e0c2fe94e50ec6 347 Gene3D G3DSA:3.40.50.10210 50 328 3.1E-121 T 12-10-2018 M892_02680 a2030830d550a014e0e0c2fe94e50ec6 347 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 1 347 35.442 T 12-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 M892_02680 a2030830d550a014e0e0c2fe94e50ec6 347 SUPERFAMILY SSF52733 2 346 1.44E-111 T 12-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 M892_02680 a2030830d550a014e0e0c2fe94e50ec6 347 Gene3D G3DSA:1.10.1610.10 12 345 3.1E-121 T 12-10-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 M892_02680 a2030830d550a014e0e0c2fe94e50ec6 347 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 2 345 1.4E-128 T 12-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 M892_02680 a2030830d550a014e0e0c2fe94e50ec6 347 Pfam PF02277 Phosphoribosyltransferase 2 345 2.1E-126 T 12-10-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 M892_03610 357b867c0207aaaf492098d0d300a4cb 195 SUPERFAMILY SSF109604 4 182 1.0E-41 T 12-10-2018 M892_03610 357b867c0207aaaf492098d0d300a4cb 195 Gene3D G3DSA:1.10.3210.10 1 195 2.2E-52 T 12-10-2018 M892_03610 357b867c0207aaaf492098d0d300a4cb 195 Pfam PF13023 HD domain 15 172 3.9E-51 T 12-10-2018 IPR006674 HD domain M892_16660 d07b54d09a68ccffd951400124e2a241 233 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 57 70 - T 12-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 M892_16660 d07b54d09a68ccffd951400124e2a241 233 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 6 226 4.6E-58 T 12-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 M892_16660 d07b54d09a68ccffd951400124e2a241 233 SMART SM00934 5 226 1.1E-101 T 12-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 M892_16660 d07b54d09a68ccffd951400124e2a241 233 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 225 1.4E-51 T 12-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 M892_16660 d07b54d09a68ccffd951400124e2a241 233 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 3 231 40.499 T 12-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 M892_16660 d07b54d09a68ccffd951400124e2a241 233 SUPERFAMILY SSF51366 1 228 2.18E-77 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 M892_16660 d07b54d09a68ccffd951400124e2a241 233 Gene3D G3DSA:3.20.20.70 2 230 8.7E-86 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M892_13870 551a1376a9d37239be8c9fe59cbcc261 833 Pfam PF04408 Helicase associated domain (HA2) 399 463 3.9E-9 T 12-10-2018 IPR007502 Helicase-associated domain GO:0004386 M892_13870 551a1376a9d37239be8c9fe59cbcc261 833 Pfam PF00270 DEAD/DEAH box helicase 22 173 5.2E-10 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 M892_13870 551a1376a9d37239be8c9fe59cbcc261 833 SUPERFAMILY SSF52540 21 497 1.49E-51 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_13870 551a1376a9d37239be8c9fe59cbcc261 833 SMART SM00487 13 195 2.3E-13 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain M892_13870 551a1376a9d37239be8c9fe59cbcc261 833 Pfam PF08482 ATP-dependent helicase C-terminal 685 817 9.5E-52 T 12-10-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal M892_13870 551a1376a9d37239be8c9fe59cbcc261 833 SMART SM00490 237 338 2.4E-18 T 12-10-2018 IPR001650 Helicase, C-terminal M892_13870 551a1376a9d37239be8c9fe59cbcc261 833 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 15 829 0.0 T 12-10-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 M892_13870 551a1376a9d37239be8c9fe59cbcc261 833 Gene3D G3DSA:1.20.120.1080 383 481 4.3E-7 T 12-10-2018 M892_13870 551a1376a9d37239be8c9fe59cbcc261 833 SMART SM00847 398 510 6.5E-6 T 12-10-2018 IPR007502 Helicase-associated domain GO:0004386 M892_13870 551a1376a9d37239be8c9fe59cbcc261 833 Gene3D G3DSA:3.40.50.300 191 356 5.3E-52 T 12-10-2018 M892_13870 551a1376a9d37239be8c9fe59cbcc261 833 PIRSF PIRSF005496 11 831 0.0 T 12-10-2018 M892_13870 551a1376a9d37239be8c9fe59cbcc261 833 Gene3D G3DSA:3.40.50.300 11 190 5.9E-52 T 12-10-2018 M892_13870 551a1376a9d37239be8c9fe59cbcc261 833 Pfam PF00271 Helicase conserved C-terminal domain 216 337 1.4E-14 T 12-10-2018 IPR001650 Helicase, C-terminal M892_27485 e5f402f63f6e529c95f0649c78ff3786 177 Pfam PF13302 Acetyltransferase (GNAT) domain 11 147 1.2E-20 T 12-10-2018 IPR000182 GNAT domain M892_27485 e5f402f63f6e529c95f0649c78ff3786 177 Gene3D G3DSA:3.40.630.30 5 171 5.8E-27 T 12-10-2018 M892_27485 e5f402f63f6e529c95f0649c78ff3786 177 SUPERFAMILY SSF55729 1 153 3.76E-29 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_21940 850ede089c4b68d764e074de03da0448 696 SUPERFAMILY SSF49373 318 403 8.63E-8 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments M892_21940 850ede089c4b68d764e074de03da0448 696 Pfam PF05689 Salmonella repeat of unknown function (DUF823) 196 302 1.2E-5 T 12-10-2018 IPR008541 Protein of unknown function DUF823 M892_21940 850ede089c4b68d764e074de03da0448 696 Gene3D G3DSA:2.60.40.10 402 512 2.1E-10 T 12-10-2018 IPR013783 Immunoglobulin-like fold M892_21940 850ede089c4b68d764e074de03da0448 696 Gene3D G3DSA:2.60.40.10 311 401 5.0E-7 T 12-10-2018 IPR013783 Immunoglobulin-like fold M892_21940 850ede089c4b68d764e074de03da0448 696 SUPERFAMILY SSF49373 408 499 3.4E-10 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments M892_15325 16586bf3a6eaa5585b93e26b3ceaa39f 699 PIRSF PIRSF005419 9 699 1.3E-253 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 M892_15325 16586bf3a6eaa5585b93e26b3ceaa39f 699 Gene3D G3DSA:1.10.8.540 509 596 2.1E-23 T 12-10-2018 M892_15325 16586bf3a6eaa5585b93e26b3ceaa39f 699 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 22 696 1.1E-267 T 12-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 M892_15325 16586bf3a6eaa5585b93e26b3ceaa39f 699 Gene3D G3DSA:3.40.30.60 365 508 6.4E-54 T 12-10-2018 M892_15325 16586bf3a6eaa5585b93e26b3ceaa39f 699 Gene3D G3DSA:1.10.490.80 600 697 4.8E-15 T 12-10-2018 M892_15325 16586bf3a6eaa5585b93e26b3ceaa39f 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 75 94 2.4E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 M892_15325 16586bf3a6eaa5585b93e26b3ceaa39f 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 161 179 2.4E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 M892_15325 16586bf3a6eaa5585b93e26b3ceaa39f 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 38 51 2.4E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 M892_15325 16586bf3a6eaa5585b93e26b3ceaa39f 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 191 208 2.4E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 M892_15325 16586bf3a6eaa5585b93e26b3ceaa39f 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 142 158 2.4E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 M892_15325 16586bf3a6eaa5585b93e26b3ceaa39f 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 242 256 2.4E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 M892_15325 16586bf3a6eaa5585b93e26b3ceaa39f 699 Pfam PF00771 FHIPEP family 32 689 2.7E-270 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 M892_15325 16586bf3a6eaa5585b93e26b3ceaa39f 699 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 147 170 - T 12-10-2018 IPR025505 FHIPEP conserved site M892_06230 bf0f5e1aacc030cb51e01ac664b64498 261 SUPERFAMILY SSF81345 2 253 1.31E-38 T 12-10-2018 IPR037294 ABC transporter, BtuC-like M892_06230 bf0f5e1aacc030cb51e01ac664b64498 261 Gene3D G3DSA:1.10.3470.10 29 260 6.1E-8 T 12-10-2018 IPR037294 ABC transporter, BtuC-like M892_06230 bf0f5e1aacc030cb51e01ac664b64498 261 Pfam PF00950 ABC 3 transport family 1 256 3.8E-73 T 12-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 M892_20435 57f53f1410774b3b08c720c4b07cc9fd 117 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 33 46 - T 12-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 M892_20435 57f53f1410774b3b08c720c4b07cc9fd 117 Gene3D G3DSA:3.20.20.70 1 117 1.6E-38 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M892_20435 57f53f1410774b3b08c720c4b07cc9fd 117 SUPERFAMILY SSF51569 2 116 1.06E-34 T 12-10-2018 M892_20435 57f53f1410774b3b08c720c4b07cc9fd 117 Pfam PF01081 KDPG and KHG aldolase 1 108 1.2E-38 T 12-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 M892_14285 47fb3cdc0414632ce27203068dd08f1c 272 Pfam PF01464 Transglycosylase SLT domain 101 222 1.4E-25 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 M892_14285 47fb3cdc0414632ce27203068dd08f1c 272 SUPERFAMILY SSF53955 90 265 7.88E-36 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily M892_14285 47fb3cdc0414632ce27203068dd08f1c 272 Gene3D G3DSA:1.10.530.10 84 262 1.2E-46 T 12-10-2018 M892_17085 0db1a08609b304969e6e0ca6c1aee969 202 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 4 188 1.6E-53 T 12-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 M892_17085 0db1a08609b304969e6e0ca6c1aee969 202 Pfam PF00117 Glutamine amidotransferase class-I 6 186 2.2E-47 T 12-10-2018 IPR017926 Glutamine amidotransferase M892_17085 0db1a08609b304969e6e0ca6c1aee969 202 Gene3D G3DSA:3.40.50.880 1 193 1.8E-59 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M892_17085 0db1a08609b304969e6e0ca6c1aee969 202 SUPERFAMILY SSF52317 2 192 7.3E-48 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M892_17085 0db1a08609b304969e6e0ca6c1aee969 202 PRINTS PR00097 Anthranilate synthase component II signature 79 90 1.5E-34 T 12-10-2018 M892_17085 0db1a08609b304969e6e0ca6c1aee969 202 PRINTS PR00097 Anthranilate synthase component II signature 166 179 1.5E-34 T 12-10-2018 M892_17085 0db1a08609b304969e6e0ca6c1aee969 202 PRINTS PR00097 Anthranilate synthase component II signature 104 112 1.5E-34 T 12-10-2018 M892_17085 0db1a08609b304969e6e0ca6c1aee969 202 PRINTS PR00097 Anthranilate synthase component II signature 4 18 1.5E-34 T 12-10-2018 M892_17085 0db1a08609b304969e6e0ca6c1aee969 202 PRINTS PR00097 Anthranilate synthase component II signature 124 136 1.5E-34 T 12-10-2018 M892_17085 0db1a08609b304969e6e0ca6c1aee969 202 PRINTS PR00097 Anthranilate synthase component II signature 52 61 1.5E-34 T 12-10-2018 M892_17085 0db1a08609b304969e6e0ca6c1aee969 202 PRINTS PR00096 Glutamine amidotransferase superfamily signature 166 179 2.2E-13 T 12-10-2018 M892_17085 0db1a08609b304969e6e0ca6c1aee969 202 PRINTS PR00096 Glutamine amidotransferase superfamily signature 79 90 2.2E-13 T 12-10-2018 M892_17085 0db1a08609b304969e6e0ca6c1aee969 202 PRINTS PR00096 Glutamine amidotransferase superfamily signature 52 61 2.2E-13 T 12-10-2018 M892_17085 0db1a08609b304969e6e0ca6c1aee969 202 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 49 63 1.5E-5 T 12-10-2018 M892_17085 0db1a08609b304969e6e0ca6c1aee969 202 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 79 95 1.5E-5 T 12-10-2018 M892_13335 02fe49bee70f73d50587f53ebe37d6bd 218 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 33.36 T 12-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 M892_13335 02fe49bee70f73d50587f53ebe37d6bd 218 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 213 2.6E-57 T 12-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 M892_13335 02fe49bee70f73d50587f53ebe37d6bd 218 Gene3D G3DSA:3.30.70.260 125 196 1.4E-77 T 12-10-2018 M892_13335 02fe49bee70f73d50587f53ebe37d6bd 218 SUPERFAMILY SSF100950 1 146 2.56E-46 T 12-10-2018 IPR037171 NagB/RpiA transferase-like M892_13335 02fe49bee70f73d50587f53ebe37d6bd 218 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 214 2.6E-68 T 12-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 M892_13335 02fe49bee70f73d50587f53ebe37d6bd 218 Gene3D G3DSA:3.40.50.1360 7 207 1.4E-77 T 12-10-2018 M892_13335 02fe49bee70f73d50587f53ebe37d6bd 218 SUPERFAMILY SSF75445 127 198 1.27E-23 T 12-10-2018 M892_19250 710456dcf4fd312020286a6aed318e28 295 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 5 289 1.3E-37 T 12-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 M892_19250 710456dcf4fd312020286a6aed318e28 295 Gene3D G3DSA:3.40.630.10 6 289 1.4E-87 T 12-10-2018 M892_19250 710456dcf4fd312020286a6aed318e28 295 Gene3D G3DSA:2.20.25.160 219 266 1.4E-87 T 12-10-2018 M892_19250 710456dcf4fd312020286a6aed318e28 295 SUPERFAMILY SSF53187 3 292 7.28E-70 T 12-10-2018 M892_19250 710456dcf4fd312020286a6aed318e28 295 PIRSF PIRSF018001 1 295 2.6E-59 T 12-10-2018 IPR016708 Aspartoacylase GO:0016811 M892_19250 710456dcf4fd312020286a6aed318e28 295 Hamap MF_00704 Probable aspartoacylase. 2 294 29.363 T 12-10-2018 IPR016708 Aspartoacylase GO:0016811 M892_00510 db37b85e713f072c7b20e01d3e389304 93 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 10 74 3.9E-16 T 12-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM M892_00510 db37b85e713f072c7b20e01d3e389304 93 SUPERFAMILY SSF143120 10 80 1.14E-16 T 12-10-2018 IPR036165 YefM-like superfamily M892_00510 db37b85e713f072c7b20e01d3e389304 93 Gene3D G3DSA:3.40.1620.40 11 74 1.2E-10 T 12-10-2018 M892_00510 db37b85e713f072c7b20e01d3e389304 93 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 12 63 1.6E-12 T 12-10-2018 M892_13885 53519036f8a7d00bca682f6b796b6af8 862 Pfam PF00330 Aconitase family (aconitate hydratase) 469 815 5.8E-42 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 M892_13885 53519036f8a7d00bca682f6b796b6af8 862 Pfam PF11791 Aconitate B N-terminal domain 4 156 5.6E-65 T 12-10-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 M892_13885 53519036f8a7d00bca682f6b796b6af8 862 SUPERFAMILY SSF52016 162 369 7.46E-67 T 12-10-2018 M892_13885 53519036f8a7d00bca682f6b796b6af8 862 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 850 0.0 T 12-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 M892_13885 53519036f8a7d00bca682f6b796b6af8 862 ProSitePatterns PS00450 Aconitase family signature 1. 699 716 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 M892_13885 53519036f8a7d00bca682f6b796b6af8 862 Gene3D G3DSA:1.25.40.310 1 160 2.1E-70 T 12-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 M892_13885 53519036f8a7d00bca682f6b796b6af8 862 Gene3D G3DSA:3.20.19.10 162 358 1.2E-75 T 12-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 M892_13885 53519036f8a7d00bca682f6b796b6af8 862 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 379 1.4E-96 T 12-10-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 M892_13885 53519036f8a7d00bca682f6b796b6af8 862 Gene3D G3DSA:3.40.1060.10 382 678 1.9E-149 T 12-10-2018 IPR015932 Aconitase, domain 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-1268020|Reactome: R-HSA-71403 M892_13885 53519036f8a7d00bca682f6b796b6af8 862 PIRSF PIRSF036687 1 856 0.0 T 12-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 M892_13885 53519036f8a7d00bca682f6b796b6af8 862 SUPERFAMILY SSF53732 377 857 3.01E-148 T 12-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 M892_13885 53519036f8a7d00bca682f6b796b6af8 862 Gene3D G3DSA:3.30.499.10 399 526 1.9E-149 T 12-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 M892_13885 53519036f8a7d00bca682f6b796b6af8 862 Gene3D G3DSA:3.30.499.10 680 862 7.1E-73 T 12-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 M892_13885 53519036f8a7d00bca682f6b796b6af8 862 ProSitePatterns PS01244 Aconitase family signature 2. 758 771 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 M892_13885 53519036f8a7d00bca682f6b796b6af8 862 SUPERFAMILY SSF74778 2 159 1.26E-66 T 12-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 M892_07555 265fad94f6331d6349ce8221483d3841 498 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 385 464 5.6E-25 T 12-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like M892_07555 265fad94f6331d6349ce8221483d3841 498 Gene3D G3DSA:3.30.300.20 385 467 7.0E-20 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta M892_07555 265fad94f6331d6349ce8221483d3841 498 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 6.4E-10 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 M892_07555 265fad94f6331d6349ce8221483d3841 498 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 73 91 6.4E-10 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 M892_07555 265fad94f6331d6349ce8221483d3841 498 PIRSF PIRSF006485 1 473 1.6E-178 T 12-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 M892_07555 265fad94f6331d6349ce8221483d3841 498 SUPERFAMILY SSF52540 4 163 2.75E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_07555 265fad94f6331d6349ce8221483d3841 498 Gene3D G3DSA:3.40.50.300 2 160 1.1E-42 T 12-10-2018 M892_07555 265fad94f6331d6349ce8221483d3841 498 Gene3D G3DSA:3.40.50.300 204 382 5.0E-50 T 12-10-2018 M892_07555 265fad94f6331d6349ce8221483d3841 498 SMART SM00382 208 355 0.1 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_07555 265fad94f6331d6349ce8221483d3841 498 SMART SM00382 1 174 1.7 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_07555 265fad94f6331d6349ce8221483d3841 498 Hamap MF_00195 GTPase Der [der]. 2 468 39.143 T 12-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 M892_07555 265fad94f6331d6349ce8221483d3841 498 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 208 373 1.1E-25 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 M892_07555 265fad94f6331d6349ce8221483d3841 498 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 155 9.2E-22 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 M892_07555 265fad94f6331d6349ce8221483d3841 498 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 465 1.9E-177 T 12-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 M892_07555 265fad94f6331d6349ce8221483d3841 498 Pfam PF01926 50S ribosome-binding GTPase 5 120 1.0E-26 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 M892_07555 265fad94f6331d6349ce8221483d3841 498 Pfam PF01926 50S ribosome-binding GTPase 212 329 1.3E-24 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 M892_07555 265fad94f6331d6349ce8221483d3841 498 SUPERFAMILY SSF52540 140 471 4.36E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_04430 b0c94863fad2ea71fe22388460bd27ea 376 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 49 116 7.6E-18 T 12-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 M892_04430 b0c94863fad2ea71fe22388460bd27ea 376 Gene3D G3DSA:2.180.10.10 36 115 6.1E-10 T 12-10-2018 M892_20585 527e2525c1419c17f50a98e33975e370 606 SUPERFAMILY SSF141868 359 600 9.81E-71 T 12-10-2018 IPR035919 EAL domain superfamily M892_20585 527e2525c1419c17f50a98e33975e370 606 SUPERFAMILY SSF55781 30 144 3.14E-7 T 12-10-2018 M892_20585 527e2525c1419c17f50a98e33975e370 606 SMART SM00267 166 330 1.5E-26 T 12-10-2018 IPR000160 GGDEF domain M892_20585 527e2525c1419c17f50a98e33975e370 606 Gene3D G3DSA:3.30.70.270 171 342 1.2E-35 T 12-10-2018 M892_20585 527e2525c1419c17f50a98e33975e370 606 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 177 329 4.8E-26 T 12-10-2018 IPR000160 GGDEF domain M892_20585 527e2525c1419c17f50a98e33975e370 606 Gene3D G3DSA:3.20.20.450 343 605 1.4E-74 T 12-10-2018 IPR035919 EAL domain superfamily M892_20585 527e2525c1419c17f50a98e33975e370 606 SMART SM00052 345 593 6.7E-74 T 12-10-2018 IPR001633 EAL domain M892_20585 527e2525c1419c17f50a98e33975e370 606 Pfam PF00990 Diguanylate cyclase, GGDEF domain 178 324 6.6E-28 T 12-10-2018 IPR000160 GGDEF domain M892_20585 527e2525c1419c17f50a98e33975e370 606 Pfam PF00563 EAL domain 351 588 8.8E-61 T 12-10-2018 IPR001633 EAL domain M892_20585 527e2525c1419c17f50a98e33975e370 606 SUPERFAMILY SSF55073 182 332 1.8E-31 T 12-10-2018 IPR029787 Nucleotide cyclase M892_23655 31dcbdd8f1e0a5db36e780168b6d9ce6 193 Pfam PF03861 ANTAR domain 134 186 2.3E-17 T 12-10-2018 IPR005561 ANTAR domain GO:0003723 M892_23655 31dcbdd8f1e0a5db36e780168b6d9ce6 193 SUPERFAMILY SSF52172 2 186 9.19E-25 T 12-10-2018 IPR011006 CheY-like superfamily M892_23655 31dcbdd8f1e0a5db36e780168b6d9ce6 193 SMART SM01012 131 186 5.6E-19 T 12-10-2018 IPR005561 ANTAR domain GO:0003723 M892_23655 31dcbdd8f1e0a5db36e780168b6d9ce6 193 Gene3D G3DSA:1.10.10.10 133 192 1.3E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_05900 c9572fb012fd166a1343fe24f16ffe98 572 SUPERFAMILY SSF52518 9 177 3.48E-31 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold M892_05900 c9572fb012fd166a1343fe24f16ffe98 572 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 13 141 7.0E-30 T 12-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 M892_05900 c9572fb012fd166a1343fe24f16ffe98 572 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 421 549 1.3E-5 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 M892_05900 c9572fb012fd166a1343fe24f16ffe98 572 Gene3D G3DSA:3.40.50.1220 215 346 8.1E-37 T 12-10-2018 M892_05900 c9572fb012fd166a1343fe24f16ffe98 572 SUPERFAMILY SSF52518 393 560 1.36E-23 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold M892_05900 c9572fb012fd166a1343fe24f16ffe98 572 Pfam PF16582 Middle domain of thiamine pyrophosphate 189 402 8.5E-35 T 12-10-2018 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 M892_05900 c9572fb012fd166a1343fe24f16ffe98 572 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 6 568 32.034 T 12-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 M892_05900 c9572fb012fd166a1343fe24f16ffe98 572 PIRSF PIRSF004983 3 572 3.9E-181 T 12-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 M892_05900 c9572fb012fd166a1343fe24f16ffe98 572 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 12 444 3.7E-127 T 12-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 M892_05900 c9572fb012fd166a1343fe24f16ffe98 572 Gene3D G3DSA:3.40.50.970 366 570 1.7E-46 T 12-10-2018 M892_05900 c9572fb012fd166a1343fe24f16ffe98 572 Gene3D G3DSA:3.40.50.970 4 198 9.5E-57 T 12-10-2018 M892_08920 79a38145c5ca6405bc8e2f86a1691997 516 Gene3D G3DSA:1.10.3720.10 1 251 4.8E-42 T 12-10-2018 IPR035906 MetI-like superfamily M892_08920 79a38145c5ca6405bc8e2f86a1691997 516 SUPERFAMILY SSF161098 273 509 3.4E-33 T 12-10-2018 IPR035906 MetI-like superfamily M892_08920 79a38145c5ca6405bc8e2f86a1691997 516 SUPERFAMILY SSF161098 24 245 3.79E-41 T 12-10-2018 IPR035906 MetI-like superfamily M892_08920 79a38145c5ca6405bc8e2f86a1691997 516 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 52 244 2.6E-8 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M892_08920 79a38145c5ca6405bc8e2f86a1691997 516 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 344 501 1.6E-7 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M892_08920 79a38145c5ca6405bc8e2f86a1691997 516 TIGRFAM TIGR01253 thiP: thiamine/thiamine pyrophosphate ABC transporter, permease protein 3 506 2.0E-159 T 12-10-2018 IPR005947 Thiamine ABC transporter, permease protein GO:0005215|GO:0015888|GO:0016021 M892_08920 79a38145c5ca6405bc8e2f86a1691997 516 Gene3D G3DSA:1.10.3720.10 271 515 2.1E-29 T 12-10-2018 IPR035906 MetI-like superfamily M892_10580 59fb6150553b4ab84865be77caff1c78 631 SUPERFAMILY SSF51905 6 261 6.49E-52 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_10580 59fb6150553b4ab84865be77caff1c78 631 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 12-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 M892_10580 59fb6150553b4ab84865be77caff1c78 631 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 2.7E-294 T 12-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 M892_10580 59fb6150553b4ab84865be77caff1c78 631 Pfam PF01134 Glucose inhibited division protein A 8 399 2.6E-170 T 12-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 M892_10580 59fb6150553b4ab84865be77caff1c78 631 SMART SM01228 546 617 2.3E-42 T 12-10-2018 M892_10580 59fb6150553b4ab84865be77caff1c78 631 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 42.732 T 12-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 M892_10580 59fb6150553b4ab84865be77caff1c78 631 Gene3D G3DSA:3.50.50.60 1 232 9.9E-91 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_10580 59fb6150553b4ab84865be77caff1c78 631 Gene3D G3DSA:3.50.50.60 296 458 6.6E-56 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_10580 59fb6150553b4ab84865be77caff1c78 631 Gene3D G3DSA:1.10.150.570 569 622 6.7E-23 T 12-10-2018 M892_10580 59fb6150553b4ab84865be77caff1c78 631 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 12-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 M892_10580 59fb6150553b4ab84865be77caff1c78 631 Pfam PF13932 GidA associated domain 403 616 1.5E-76 T 12-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 M892_10580 59fb6150553b4ab84865be77caff1c78 631 Gene3D G3DSA:1.10.10.1800 459 550 4.5E-32 T 12-10-2018 M892_02215 0908d5c97d1cc6957f3878272dd961e8 358 Gene3D G3DSA:3.40.50.2000 191 339 6.0E-30 T 12-10-2018 M892_02215 0908d5c97d1cc6957f3878272dd961e8 358 Pfam PF00534 Glycosyl transferases group 1 191 326 5.1E-22 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 M892_02215 0908d5c97d1cc6957f3878272dd961e8 358 Gene3D G3DSA:3.40.50.2000 20 190 2.8E-16 T 12-10-2018 M892_02215 0908d5c97d1cc6957f3878272dd961e8 358 SUPERFAMILY SSF53756 23 353 1.84E-55 T 12-10-2018 M892_02215 0908d5c97d1cc6957f3878272dd961e8 358 Pfam PF13439 Glycosyltransferase Family 4 25 170 6.2E-18 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 M892_07890 9490c4bff138b6a0225a0b3d18b477d2 242 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 1 240 37.3 T 12-10-2018 IPR017689 Outer membrane protein assembly factor BamD M892_07890 9490c4bff138b6a0225a0b3d18b477d2 242 SUPERFAMILY SSF48452 30 119 6.64E-8 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_07890 9490c4bff138b6a0225a0b3d18b477d2 242 Gene3D G3DSA:1.25.40.10 28 242 2.3E-53 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_07890 9490c4bff138b6a0225a0b3d18b477d2 242 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 6 239 4.6E-79 T 12-10-2018 IPR017689 Outer membrane protein assembly factor BamD M892_07890 9490c4bff138b6a0225a0b3d18b477d2 242 Pfam PF13525 Outer membrane lipoprotein 26 232 3.0E-79 T 12-10-2018 IPR039565 Outer membrane lipoprotein BamD-like M892_02330 5dc9239c0395afb83eb83712097e4307 128 Gene3D G3DSA:1.20.120.550 3 128 2.5E-12 T 12-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily M892_02330 5dc9239c0395afb83eb83712097e4307 128 Pfam PF01124 MAPEG family 4 127 1.7E-16 T 12-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein M892_02330 5dc9239c0395afb83eb83712097e4307 128 SUPERFAMILY SSF161084 4 124 5.69E-21 T 12-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily M892_16315 79369756372f1ba5cbd9480d35612bd0 528 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 528 377.045 T 12-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 M892_16315 79369756372f1ba5cbd9480d35612bd0 528 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 1 514 9.5E-303 T 12-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 M892_16315 79369756372f1ba5cbd9480d35612bd0 528 TIGRFAM TIGR00774 NhaB: Na+/H+ antiporter NhaB 1 515 0.0 T 12-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 M892_07055 ae8d16ab9d2ff072f755f9b348f3cb5c 482 Gene3D G3DSA:3.40.50.620 175 397 4.4E-51 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M892_07055 ae8d16ab9d2ff072f755f9b348f3cb5c 482 Gene3D G3DSA:3.30.2130.30 1 174 4.1E-33 T 12-10-2018 M892_07055 ae8d16ab9d2ff072f755f9b348f3cb5c 482 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 369 2.0E-72 T 12-10-2018 IPR020536 Thil, AANH domain GO:0004810 KEGG: 00730+2.8.1.4 M892_07055 ae8d16ab9d2ff072f755f9b348f3cb5c 482 Pfam PF02926 THUMP domain 56 158 4.7E-23 T 12-10-2018 IPR004114 THUMP domain GO:0003723 M892_07055 ae8d16ab9d2ff072f755f9b348f3cb5c 482 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 383 482 5.5E-41 T 12-10-2018 IPR026340 Thiazole biosynthesis domain GO:0052837 KEGG: 00730+2.8.1.4 M892_07055 ae8d16ab9d2ff072f755f9b348f3cb5c 482 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 4 376 3.3E-112 T 12-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 M892_07055 ae8d16ab9d2ff072f755f9b348f3cb5c 482 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 482 221.703 T 12-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 M892_07055 ae8d16ab9d2ff072f755f9b348f3cb5c 482 SUPERFAMILY SSF52402 174 372 1.06E-41 T 12-10-2018 M892_07055 ae8d16ab9d2ff072f755f9b348f3cb5c 482 SMART SM00981 75 165 5.7E-26 T 12-10-2018 IPR004114 THUMP domain GO:0003723 M892_07055 ae8d16ab9d2ff072f755f9b348f3cb5c 482 SUPERFAMILY SSF143437 1 173 7.67E-47 T 12-10-2018 M892_07055 ae8d16ab9d2ff072f755f9b348f3cb5c 482 Gene3D G3DSA:3.40.250.10 398 482 2.9E-11 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily M892_07055 ae8d16ab9d2ff072f755f9b348f3cb5c 482 SUPERFAMILY SSF52821 403 481 7.6E-12 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily M892_11160 9705d808800472f9ad9b1217963367f4 238 Pfam PF13419 Haloacid dehalogenase-like hydrolase 15 206 1.2E-14 T 12-10-2018 M892_11160 9705d808800472f9ad9b1217963367f4 238 Gene3D G3DSA:1.20.120.1600 24 110 1.4E-61 T 12-10-2018 M892_11160 9705d808800472f9ad9b1217963367f4 238 SUPERFAMILY SSF56784 10 238 1.1E-40 T 12-10-2018 IPR036412 HAD-like superfamily M892_11160 9705d808800472f9ad9b1217963367f4 238 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 196 209 3.5E-5 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M892_11160 9705d808800472f9ad9b1217963367f4 238 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 150 166 3.5E-5 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M892_11160 9705d808800472f9ad9b1217963367f4 238 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 10 21 3.5E-5 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M892_11160 9705d808800472f9ad9b1217963367f4 238 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 119 201 9.0E-10 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M892_11160 9705d808800472f9ad9b1217963367f4 238 Gene3D G3DSA:3.40.50.1000 11 231 1.4E-61 T 12-10-2018 IPR023214 HAD superfamily M892_03180 c4877eb5472f7d2744c4e65980762a43 128 Pfam PF07007 Lysozyme inhibitor LprI 39 124 1.3E-15 T 12-10-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal M892_03180 c4877eb5472f7d2744c4e65980762a43 128 Gene3D G3DSA:1.20.1270.180 25 127 1.1E-15 T 12-10-2018 M892_28730 c4877eb5472f7d2744c4e65980762a43 128 Pfam PF07007 Lysozyme inhibitor LprI 39 124 1.3E-15 T 12-10-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal M892_28730 c4877eb5472f7d2744c4e65980762a43 128 Gene3D G3DSA:1.20.1270.180 25 127 1.1E-15 T 12-10-2018 M892_04195 6718cf98edd91f1897c29245e4e51865 374 SUPERFAMILY SSF51735 137 303 5.02E-49 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_04195 6718cf98edd91f1897c29245e4e51865 374 Gene3D G3DSA:3.40.50.720 3 353 1.6E-136 T 12-10-2018 M892_04195 6718cf98edd91f1897c29245e4e51865 374 SUPERFAMILY SSF52283 1 360 3.15E-67 T 12-10-2018 M892_04195 6718cf98edd91f1897c29245e4e51865 374 PIRSF PIRSF000183 1 371 3.1E-156 T 12-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 M892_04195 6718cf98edd91f1897c29245e4e51865 374 SMART SM01003 4 137 4.8E-79 T 12-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal M892_04195 6718cf98edd91f1897c29245e4e51865 374 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 4.3E-46 T 12-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal M892_04195 6718cf98edd91f1897c29245e4e51865 374 Gene3D G3DSA:3.40.50.720 130 305 1.6E-136 T 12-10-2018 M892_04195 6718cf98edd91f1897c29245e4e51865 374 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 370 1.2E-155 T 12-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 M892_04195 6718cf98edd91f1897c29245e4e51865 374 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 352 1.9E-83 T 12-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain M892_04195 6718cf98edd91f1897c29245e4e51865 374 SMART SM01002 149 297 3.6E-87 T 12-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain M892_23630 5d3e9f35e5222044f87ca82d0ac5ff28 111 Gene3D G3DSA:2.102.10.10 3 109 2.4E-33 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 M892_23630 5d3e9f35e5222044f87ca82d0ac5ff28 111 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 5 105 1.3E-33 T 12-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 M892_23630 5d3e9f35e5222044f87ca82d0ac5ff28 111 Pfam PF13806 Rieske-like [2Fe-2S] domain 7 105 7.2E-33 T 12-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 M892_23630 5d3e9f35e5222044f87ca82d0ac5ff28 111 SUPERFAMILY SSF50022 5 106 3.93E-33 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 M892_16115 c9a26a8d0e5b36b18b736a37b89d6bf5 237 SUPERFAMILY SSF53098 7 237 3.03E-28 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_16115 c9a26a8d0e5b36b18b736a37b89d6bf5 237 Pfam PF01609 Transposase DDE domain 93 237 2.1E-9 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_06380 327d59d08bc20a54f77cf9065fa45a40 214 SUPERFAMILY SSF52540 1 193 7.56E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_06380 327d59d08bc20a54f77cf9065fa45a40 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 52.738 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 M892_06380 327d59d08bc20a54f77cf9065fa45a40 214 Pfam PF00406 Adenylate kinase 5 185 2.8E-59 T 12-10-2018 M892_06380 327d59d08bc20a54f77cf9065fa45a40 214 Gene3D G3DSA:3.40.50.300 1 214 1.0E-77 T 12-10-2018 M892_06380 327d59d08bc20a54f77cf9065fa45a40 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 12-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 M892_06380 327d59d08bc20a54f77cf9065fa45a40 214 Pfam PF05191 Adenylate kinase, active site lid 123 158 9.0E-15 T 12-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 M892_06380 327d59d08bc20a54f77cf9065fa45a40 214 PRINTS PR00094 Adenylate kinase signature 4 17 2.0E-35 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 M892_06380 327d59d08bc20a54f77cf9065fa45a40 214 PRINTS PR00094 Adenylate kinase signature 32 46 2.0E-35 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 M892_06380 327d59d08bc20a54f77cf9065fa45a40 214 PRINTS PR00094 Adenylate kinase signature 156 171 2.0E-35 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 M892_06380 327d59d08bc20a54f77cf9065fa45a40 214 PRINTS PR00094 Adenylate kinase signature 173 187 2.0E-35 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 M892_06380 327d59d08bc20a54f77cf9065fa45a40 214 PRINTS PR00094 Adenylate kinase signature 81 97 2.0E-35 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 M892_06380 327d59d08bc20a54f77cf9065fa45a40 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 213 8.8E-75 T 12-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 M892_01430 42bbafdda8c8888725227efcba65444a 298 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 3 296 49.703 T 12-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 M892_01430 42bbafdda8c8888725227efcba65444a 298 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 6 295 5.7E-127 T 12-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 M892_01430 42bbafdda8c8888725227efcba65444a 298 SUPERFAMILY SSF51621 5 294 8.07E-95 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 M892_01430 42bbafdda8c8888725227efcba65444a 298 Pfam PF13714 Phosphoenolpyruvate phosphomutase 14 258 2.6E-45 T 12-10-2018 M892_01430 42bbafdda8c8888725227efcba65444a 298 ProSitePatterns PS00161 Isocitrate lyase signature. 119 124 - T 12-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 M892_01430 42bbafdda8c8888725227efcba65444a 298 Gene3D G3DSA:3.20.20.60 2 298 7.6E-98 T 12-10-2018 M892_27855 5ac66d87f14958d26669277cb3b39db2 55 Gene3D G3DSA:3.30.300.20 1 44 1.5E-6 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta M892_27855 5ac66d87f14958d26669277cb3b39db2 55 SUPERFAMILY SSF82784 2 53 1.15E-6 T 12-10-2018 IPR036102 OsmC/Ohr superfamily M892_16430 c77e655e65749d624d073b080001fd49 415 SUPERFAMILY SSF53901 3 252 7.13E-80 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M892_16430 c77e655e65749d624d073b080001fd49 415 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 411 3.4E-193 T 12-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 M892_16430 c77e655e65749d624d073b080001fd49 415 SMART SM00825 Beta-ketoacyl synthase 6 415 1.8E-15 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain M892_16430 c77e655e65749d624d073b080001fd49 415 PIRSF PIRSF000447 1 415 3.6E-204 T 12-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 M892_16430 c77e655e65749d624d073b080001fd49 415 SUPERFAMILY SSF53901 215 413 5.38E-68 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M892_16430 c77e655e65749d624d073b080001fd49 415 Gene3D G3DSA:3.40.47.10 1 255 1.0E-91 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M892_16430 c77e655e65749d624d073b080001fd49 415 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 370 1.4E-36 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal M892_16430 c77e655e65749d624d073b080001fd49 415 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 4.5E-64 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal M892_16430 c77e655e65749d624d073b080001fd49 415 Gene3D G3DSA:3.40.47.10 261 413 1.4E-50 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M892_16430 c77e655e65749d624d073b080001fd49 415 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 12-10-2018 IPR018201 Beta-ketoacyl synthase, active site M892_25225 83940a8b1fd64e87ed13ddcc34c9f83b 416 PRINTS PR00181 Maltose binding protein signature 90 108 1.1E-79 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 M892_25225 83940a8b1fd64e87ed13ddcc34c9f83b 416 PRINTS PR00181 Maltose binding protein signature 319 340 1.1E-79 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 M892_25225 83940a8b1fd64e87ed13ddcc34c9f83b 416 PRINTS PR00181 Maltose binding protein signature 377 396 1.1E-79 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 M892_25225 83940a8b1fd64e87ed13ddcc34c9f83b 416 PRINTS PR00181 Maltose binding protein signature 253 272 1.1E-79 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 M892_25225 83940a8b1fd64e87ed13ddcc34c9f83b 416 PRINTS PR00181 Maltose binding protein signature 56 74 1.1E-79 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 M892_25225 83940a8b1fd64e87ed13ddcc34c9f83b 416 PRINTS PR00181 Maltose binding protein signature 191 210 1.1E-79 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 M892_25225 83940a8b1fd64e87ed13ddcc34c9f83b 416 PRINTS PR00181 Maltose binding protein signature 150 169 1.1E-79 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 M892_25225 83940a8b1fd64e87ed13ddcc34c9f83b 416 PRINTS PR00181 Maltose binding protein signature 171 190 1.1E-79 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 M892_25225 83940a8b1fd64e87ed13ddcc34c9f83b 416 Pfam PF13416 Bacterial extracellular solute-binding protein 70 345 1.6E-44 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein M892_25225 83940a8b1fd64e87ed13ddcc34c9f83b 416 Gene3D G3DSA:3.40.190.10 68 377 1.2E-134 T 12-10-2018 M892_25225 83940a8b1fd64e87ed13ddcc34c9f83b 416 Gene3D G3DSA:3.40.190.10 158 408 1.2E-134 T 12-10-2018 M892_25225 83940a8b1fd64e87ed13ddcc34c9f83b 416 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 153 170 - T 12-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 M892_25225 83940a8b1fd64e87ed13ddcc34c9f83b 416 SUPERFAMILY SSF53850 48 415 6.21E-90 T 12-10-2018 M892_02035 7f2616fc82d7c849e2eda4af1a76b3dd 483 SUPERFAMILY SSF52540 154 386 1.22E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_02035 7f2616fc82d7c849e2eda4af1a76b3dd 483 SUPERFAMILY SSF46689 427 475 2.15E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_02035 7f2616fc82d7c849e2eda4af1a76b3dd 483 Gene3D G3DSA:1.10.8.60 325 389 3.0E-18 T 12-10-2018 M892_02035 7f2616fc82d7c849e2eda4af1a76b3dd 483 Gene3D G3DSA:3.40.50.2300 16 143 8.7E-31 T 12-10-2018 M892_02035 7f2616fc82d7c849e2eda4af1a76b3dd 483 SMART SM00382 175 321 3.0E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_02035 7f2616fc82d7c849e2eda4af1a76b3dd 483 SMART SM00448 16 127 1.3E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_02035 7f2616fc82d7c849e2eda4af1a76b3dd 483 Pfam PF00072 Response regulator receiver domain 18 127 1.3E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_02035 7f2616fc82d7c849e2eda4af1a76b3dd 483 Gene3D G3DSA:3.40.50.300 144 324 2.2E-65 T 12-10-2018 M892_02035 7f2616fc82d7c849e2eda4af1a76b3dd 483 SUPERFAMILY SSF52172 16 199 5.83E-39 T 12-10-2018 IPR011006 CheY-like superfamily M892_02035 7f2616fc82d7c849e2eda4af1a76b3dd 483 Pfam PF02954 Bacterial regulatory protein, Fis family 433 474 5.6E-9 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M892_02035 7f2616fc82d7c849e2eda4af1a76b3dd 483 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 240 255 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 M892_02035 7f2616fc82d7c849e2eda4af1a76b3dd 483 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 367 376 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site M892_02035 7f2616fc82d7c849e2eda4af1a76b3dd 483 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 179 192 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 M892_02035 7f2616fc82d7c849e2eda4af1a76b3dd 483 Pfam PF00158 Sigma-54 interaction domain 155 321 1.9E-68 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 M892_02035 7f2616fc82d7c849e2eda4af1a76b3dd 483 Gene3D G3DSA:1.10.10.60 426 473 2.5E-13 T 12-10-2018 M892_23090 d46f2376db1a8ac214ce187266b8c2b2 287 Gene3D G3DSA:3.60.10.10 17 286 2.9E-28 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily M892_23090 d46f2376db1a8ac214ce187266b8c2b2 287 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 26 278 8.4E-11 T 12-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase M892_23090 d46f2376db1a8ac214ce187266b8c2b2 287 SUPERFAMILY SSF56219 21 285 5.1E-29 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily M892_08155 864c76973f047f3dd7eb4f31a786fe07 459 Gene3D G3DSA:3.90.350.10 66 347 7.0E-80 T 12-10-2018 IPR014736 Transposase, Tn5-like, core M892_08155 864c76973f047f3dd7eb4f31a786fe07 459 Pfam PF14706 Transposase DNA-binding 9 65 8.0E-17 T 12-10-2018 IPR014735 Transposase, Tn5-like, N-terminal M892_08155 864c76973f047f3dd7eb4f31a786fe07 459 Pfam PF02281 Transposase Tn5 dimerisation domain 369 454 1.9E-17 T 12-10-2018 IPR003201 Transposase Tn5, dimerisation M892_08155 864c76973f047f3dd7eb4f31a786fe07 459 Gene3D G3DSA:1.10.740.10 348 458 1.7E-41 T 12-10-2018 IPR014737 Transposase, Tn5-like, C-terminal M892_08155 864c76973f047f3dd7eb4f31a786fe07 459 Gene3D G3DSA:1.10.246.40 1 65 1.6E-24 T 12-10-2018 IPR038215 Transposase, Tn5-like, N-terminal domain superfamily M892_08155 864c76973f047f3dd7eb4f31a786fe07 459 SUPERFAMILY SSF53098 1 458 9.1E-131 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_08155 864c76973f047f3dd7eb4f31a786fe07 459 Pfam PF01609 Transposase DDE domain 222 357 3.8E-5 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_02400 864c76973f047f3dd7eb4f31a786fe07 459 Gene3D G3DSA:3.90.350.10 66 347 7.0E-80 T 12-10-2018 IPR014736 Transposase, Tn5-like, core M892_02400 864c76973f047f3dd7eb4f31a786fe07 459 Pfam PF14706 Transposase DNA-binding 9 65 8.0E-17 T 12-10-2018 IPR014735 Transposase, Tn5-like, N-terminal M892_02400 864c76973f047f3dd7eb4f31a786fe07 459 Pfam PF02281 Transposase Tn5 dimerisation domain 369 454 1.9E-17 T 12-10-2018 IPR003201 Transposase Tn5, dimerisation M892_02400 864c76973f047f3dd7eb4f31a786fe07 459 Gene3D G3DSA:1.10.740.10 348 458 1.7E-41 T 12-10-2018 IPR014737 Transposase, Tn5-like, C-terminal M892_02400 864c76973f047f3dd7eb4f31a786fe07 459 Gene3D G3DSA:1.10.246.40 1 65 1.6E-24 T 12-10-2018 IPR038215 Transposase, Tn5-like, N-terminal domain superfamily M892_02400 864c76973f047f3dd7eb4f31a786fe07 459 SUPERFAMILY SSF53098 1 458 9.1E-131 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_02400 864c76973f047f3dd7eb4f31a786fe07 459 Pfam PF01609 Transposase DDE domain 222 357 3.8E-5 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_14470 ce7dc6f118c74b1fccdf78383a32d741 332 SUPERFAMILY SSF47413 1 60 1.03E-16 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 M892_14470 ce7dc6f118c74b1fccdf78383a32d741 332 SUPERFAMILY SSF53822 61 330 6.28E-82 T 12-10-2018 IPR028082 Periplasmic binding protein-like I M892_14470 ce7dc6f118c74b1fccdf78383a32d741 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.1E-7 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M892_14470 ce7dc6f118c74b1fccdf78383a32d741 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.1E-7 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M892_14470 ce7dc6f118c74b1fccdf78383a32d741 332 Gene3D G3DSA:1.10.260.40 1 55 4.5E-22 T 12-10-2018 M892_14470 ce7dc6f118c74b1fccdf78383a32d741 332 Gene3D G3DSA:3.40.50.2300 56 305 3.5E-72 T 12-10-2018 M892_14470 ce7dc6f118c74b1fccdf78383a32d741 332 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 12-10-2018 M892_14470 ce7dc6f118c74b1fccdf78383a32d741 332 SMART SM00354 1 71 2.4E-32 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M892_14470 ce7dc6f118c74b1fccdf78383a32d741 332 Gene3D G3DSA:3.40.50.2300 160 289 3.5E-72 T 12-10-2018 M892_14470 ce7dc6f118c74b1fccdf78383a32d741 332 Pfam PF13377 Periplasmic binding protein-like domain 168 329 1.6E-36 T 12-10-2018 M892_14470 ce7dc6f118c74b1fccdf78383a32d741 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.5E-18 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M892_15840 e85aeea7c3f4e5b3bcaed1288dfdb380 193 Gene3D G3DSA:3.40.50.720 1 193 7.1E-56 T 12-10-2018 M892_15840 e85aeea7c3f4e5b3bcaed1288dfdb380 193 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 2.3E-16 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_15840 e85aeea7c3f4e5b3bcaed1288dfdb380 193 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.3E-16 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_15840 e85aeea7c3f4e5b3bcaed1288dfdb380 193 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 2.3E-16 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_15840 e85aeea7c3f4e5b3bcaed1288dfdb380 193 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 2.3E-16 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_15840 e85aeea7c3f4e5b3bcaed1288dfdb380 193 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 3.3E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_15840 e85aeea7c3f4e5b3bcaed1288dfdb380 193 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 3.3E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_15840 e85aeea7c3f4e5b3bcaed1288dfdb380 193 SUPERFAMILY SSF51735 3 193 4.35E-65 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_15840 e85aeea7c3f4e5b3bcaed1288dfdb380 193 Pfam PF00106 short chain dehydrogenase 3 189 6.4E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_15065 9302a19ac34da62d0849d57077f8ca54 346 SUPERFAMILY SSF55326 8 171 7.33E-54 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily M892_15065 9302a19ac34da62d0849d57077f8ca54 346 Gene3D G3DSA:3.30.1330.10 7 171 9.7E-70 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily M892_15065 9302a19ac34da62d0849d57077f8ca54 346 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 8 345 47.581 T 12-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 M892_15065 9302a19ac34da62d0849d57077f8ca54 346 Pfam PF02769 AIR synthase related protein, C-terminal domain 178 339 1.2E-39 T 12-10-2018 IPR010918 PurM-like, C-terminal domain M892_15065 9302a19ac34da62d0849d57077f8ca54 346 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 8 335 2.1E-150 T 12-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 M892_15065 9302a19ac34da62d0849d57077f8ca54 346 Gene3D G3DSA:3.90.650.10 172 346 1.9E-72 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily M892_15065 9302a19ac34da62d0849d57077f8ca54 346 Pfam PF00586 AIR synthase related protein, N-terminal domain 60 165 1.7E-15 T 12-10-2018 IPR016188 PurM-like, N-terminal domain M892_15065 9302a19ac34da62d0849d57077f8ca54 346 SUPERFAMILY SSF56042 172 341 4.78E-61 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily M892_13760 5b48c7f0813041498a09bcfa4cbc93aa 183 SUPERFAMILY SSF55846 5 182 1.57E-63 T 12-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 M892_13760 5b48c7f0813041498a09bcfa4cbc93aa 183 Gene3D G3DSA:3.40.80.10 3 183 1.1E-52 T 12-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 M892_13760 5b48c7f0813041498a09bcfa4cbc93aa 183 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 28 169 6.7E-26 T 12-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 M892_13760 5b48c7f0813041498a09bcfa4cbc93aa 183 SMART SM00644 18 169 2.5E-53 T 12-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 M892_14525 68bde5b05e83a351f5c91207450a0fe7 263 Pfam PF00455 DeoR C terminal sensor domain 74 232 2.3E-50 T 12-10-2018 IPR014036 DeoR C-terminal sensor domain M892_14525 68bde5b05e83a351f5c91207450a0fe7 263 Gene3D G3DSA:3.30.750.70 70 134 5.7E-8 T 12-10-2018 M892_14525 68bde5b05e83a351f5c91207450a0fe7 263 SUPERFAMILY SSF100950 74 234 1.1E-28 T 12-10-2018 IPR037171 NagB/RpiA transferase-like M892_14525 68bde5b05e83a351f5c91207450a0fe7 263 Gene3D G3DSA:1.10.10.10 1 67 1.9E-8 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_14525 68bde5b05e83a351f5c91207450a0fe7 263 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 7.4E-12 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 M892_14525 68bde5b05e83a351f5c91207450a0fe7 263 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 7.4E-12 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 M892_14525 68bde5b05e83a351f5c91207450a0fe7 263 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 12-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 M892_14525 68bde5b05e83a351f5c91207450a0fe7 263 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 4.8E-23 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 M892_14525 68bde5b05e83a351f5c91207450a0fe7 263 SMART SM00420 6 58 1.2E-25 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 M892_14525 68bde5b05e83a351f5c91207450a0fe7 263 SUPERFAMILY SSF46785 5 77 3.28E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_14525 68bde5b05e83a351f5c91207450a0fe7 263 SMART SM01134 72 234 1.2E-67 T 12-10-2018 M892_22025 5a4e81ab5cf504b82568390cc227efbf 377 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 328 343 - T 12-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site M892_22025 5a4e81ab5cf504b82568390cc227efbf 377 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 4 140 2.1E-33 T 12-10-2018 IPR002178 PTS EIIA type-2 domain M892_22025 5a4e81ab5cf504b82568390cc227efbf 377 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 194 275 6.5E-5 T 12-10-2018 IPR002178 PTS EIIA type-2 domain M892_22025 5a4e81ab5cf504b82568390cc227efbf 377 PRINTS PR00107 Phosphocarrier protein signature 342 359 5.3E-19 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like M892_22025 5a4e81ab5cf504b82568390cc227efbf 377 PRINTS PR00107 Phosphocarrier protein signature 299 315 5.3E-19 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like M892_22025 5a4e81ab5cf504b82568390cc227efbf 377 PRINTS PR00107 Phosphocarrier protein signature 327 342 5.3E-19 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like M892_22025 5a4e81ab5cf504b82568390cc227efbf 377 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 292 370 6.5E-23 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like M892_22025 5a4e81ab5cf504b82568390cc227efbf 377 Gene3D G3DSA:3.40.930.10 147 277 2.5E-5 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 M892_22025 5a4e81ab5cf504b82568390cc227efbf 377 Gene3D G3DSA:3.40.930.10 1 142 2.9E-41 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 M892_22025 5a4e81ab5cf504b82568390cc227efbf 377 Pfam PF00381 PTS HPr component phosphorylation site 292 370 1.4E-25 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like M892_22025 5a4e81ab5cf504b82568390cc227efbf 377 SUPERFAMILY SSF55804 4 140 4.32E-39 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 M892_22025 5a4e81ab5cf504b82568390cc227efbf 377 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 47 63 - T 12-10-2018 IPR002178 PTS EIIA type-2 domain M892_22025 5a4e81ab5cf504b82568390cc227efbf 377 SUPERFAMILY SSF55804 145 276 1.27E-17 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 M892_22025 5a4e81ab5cf504b82568390cc227efbf 377 Gene3D G3DSA:3.30.1340.10 287 370 2.0E-27 T 12-10-2018 IPR035895 HPr-like superfamily M892_22025 5a4e81ab5cf504b82568390cc227efbf 377 SUPERFAMILY SSF55594 291 376 6.28E-24 T 12-10-2018 IPR035895 HPr-like superfamily M892_22025 5a4e81ab5cf504b82568390cc227efbf 377 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 299 306 - T 12-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site M892_03155 8aff8db26cdf034988bd7ad2dbee07c5 85 Pfam PF01548 Transposase 2 79 3.1E-7 T 12-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 M892_20615 eb88b71512c55f294c034aa775853e54 295 SUPERFAMILY SSF53850 89 291 1.57E-29 T 12-10-2018 M892_20615 eb88b71512c55f294c034aa775853e54 295 Gene3D G3DSA:1.10.10.10 3 89 2.9E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_20615 eb88b71512c55f294c034aa775853e54 295 Gene3D G3DSA:3.40.190.10 92 286 6.9E-41 T 12-10-2018 M892_20615 eb88b71512c55f294c034aa775853e54 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.9E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_20615 eb88b71512c55f294c034aa775853e54 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.9E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_20615 eb88b71512c55f294c034aa775853e54 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.9E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_20615 eb88b71512c55f294c034aa775853e54 295 Pfam PF03466 LysR substrate binding domain 88 289 1.2E-27 T 12-10-2018 IPR005119 LysR, substrate-binding M892_20615 eb88b71512c55f294c034aa775853e54 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 62 1.1E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_20615 eb88b71512c55f294c034aa775853e54 295 SUPERFAMILY SSF46785 9 88 1.43E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_20615 eb88b71512c55f294c034aa775853e54 295 Gene3D G3DSA:3.40.190.10 164 261 6.9E-41 T 12-10-2018 M892_10805 66140a6fdd7c1bb7ce2de61de0b310da 377 Pfam PF02222 ATP-grasp domain 101 274 2.4E-51 T 12-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type M892_10805 66140a6fdd7c1bb7ce2de61de0b310da 377 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 2 350 8.7E-106 T 12-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 M892_10805 66140a6fdd7c1bb7ce2de61de0b310da 377 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 2 346 36.932 T 12-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 M892_10805 66140a6fdd7c1bb7ce2de61de0b310da 377 Gene3D G3DSA:3.30.470.20 92 343 2.3E-90 T 12-10-2018 M892_10805 66140a6fdd7c1bb7ce2de61de0b310da 377 SUPERFAMILY SSF51246 299 373 3.3E-19 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 M892_10805 66140a6fdd7c1bb7ce2de61de0b310da 377 SUPERFAMILY SSF52440 1 88 1.73E-16 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily M892_10805 66140a6fdd7c1bb7ce2de61de0b310da 377 Gene3D G3DSA:3.40.50.20 1 80 3.2E-18 T 12-10-2018 M892_10805 66140a6fdd7c1bb7ce2de61de0b310da 377 SUPERFAMILY SSF56059 92 295 7.07E-56 T 12-10-2018 M892_10805 66140a6fdd7c1bb7ce2de61de0b310da 377 Gene3D G3DSA:3.30.1490.20 107 177 2.3E-90 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 M892_09895 e24983a035f67069188a25ef6f51cd83 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 12-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 M892_09895 e24983a035f67069188a25ef6f51cd83 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 5.6E-138 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 M892_09895 e24983a035f67069188a25ef6f51cd83 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 12-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 M892_09895 e24983a035f67069188a25ef6f51cd83 469 SUPERFAMILY SSF55931 102 468 1.28E-137 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 M892_09895 e24983a035f67069188a25ef6f51cd83 469 SUPERFAMILY SSF54368 3 100 1.12E-35 T 12-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 M892_09895 e24983a035f67069188a25ef6f51cd83 469 Gene3D G3DSA:3.30.590.10 105 457 2.3E-148 T 12-10-2018 M892_09895 e24983a035f67069188a25ef6f51cd83 469 SMART SM01230 102 379 7.1E-152 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 M892_09895 e24983a035f67069188a25ef6f51cd83 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 1.1E-30 T 12-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 M892_09895 e24983a035f67069188a25ef6f51cd83 469 Gene3D G3DSA:3.10.20.70 2 104 1.3E-40 T 12-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 M892_09895 e24983a035f67069188a25ef6f51cd83 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 468 1.7E-211 T 12-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 M892_09895 e24983a035f67069188a25ef6f51cd83 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 12-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 M892_10890 96f654fd5b2398252be458ffe00ef70b 464 Gene3D G3DSA:2.60.40.420 11 156 2.0E-44 T 12-10-2018 IPR008972 Cupredoxin M892_10890 96f654fd5b2398252be458ffe00ef70b 464 SUPERFAMILY SSF49503 311 463 2.29E-34 T 12-10-2018 IPR008972 Cupredoxin M892_10890 96f654fd5b2398252be458ffe00ef70b 464 Gene3D G3DSA:2.60.40.420 157 295 1.3E-22 T 12-10-2018 IPR008972 Cupredoxin M892_10890 96f654fd5b2398252be458ffe00ef70b 464 Pfam PF07731 Multicopper oxidase 363 463 2.0E-26 T 12-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 M892_10890 96f654fd5b2398252be458ffe00ef70b 464 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 6 30 5.1E-5 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal M892_10890 96f654fd5b2398252be458ffe00ef70b 464 Gene3D G3DSA:2.60.40.420 312 464 8.4E-37 T 12-10-2018 IPR008972 Cupredoxin M892_10890 96f654fd5b2398252be458ffe00ef70b 464 ProSitePatterns PS00080 Multicopper oxidases signature 2. 446 457 - T 12-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 M892_10890 96f654fd5b2398252be458ffe00ef70b 464 Pfam PF07732 Multicopper oxidase 56 160 3.2E-38 T 12-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 M892_10890 96f654fd5b2398252be458ffe00ef70b 464 Pfam PF00394 Multicopper oxidase 200 284 1.7E-8 T 12-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 M892_10890 96f654fd5b2398252be458ffe00ef70b 464 SUPERFAMILY SSF49503 37 159 2.62E-38 T 12-10-2018 IPR008972 Cupredoxin M892_10890 96f654fd5b2398252be458ffe00ef70b 464 SUPERFAMILY SSF49503 167 284 3.15E-16 T 12-10-2018 IPR008972 Cupredoxin M892_00500 43e980afb94c062a1bf31590d4195db2 201 Pfam PF01548 Transposase 13 117 1.7E-15 T 12-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 M892_22970 2cfb8944e31d935b62e41b6731f75fec 473 Gene3D G3DSA:1.10.287.130 272 329 5.8E-18 T 12-10-2018 M892_22970 2cfb8944e31d935b62e41b6731f75fec 473 Pfam PF00512 His Kinase A (phospho-acceptor) domain 270 321 2.5E-6 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M892_22970 2cfb8944e31d935b62e41b6731f75fec 473 SUPERFAMILY SSF47384 260 329 6.28E-7 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M892_22970 2cfb8944e31d935b62e41b6731f75fec 473 SUPERFAMILY SSF55874 336 468 3.41E-18 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_22970 2cfb8944e31d935b62e41b6731f75fec 473 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 375 466 1.9E-8 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_22970 2cfb8944e31d935b62e41b6731f75fec 473 Gene3D G3DSA:3.30.565.10 330 465 5.8E-18 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_22970 2cfb8944e31d935b62e41b6731f75fec 473 Pfam PF11884 Domain of unknown function (DUF3404) 6 264 1.9E-111 T 12-10-2018 IPR021821 Protein of unknown function DUF3404 M892_22970 2cfb8944e31d935b62e41b6731f75fec 473 SMART SM00387 370 468 2.4E-13 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_22970 2cfb8944e31d935b62e41b6731f75fec 473 SMART SM00388 265 332 5.0E-5 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M892_22715 638585b972fa6e2be13a0cfc24e839f3 230 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 7 197 1.8E-53 T 12-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D M892_22715 638585b972fa6e2be13a0cfc24e839f3 230 SUPERFAMILY SSF160467 8 97 3.66E-10 T 12-10-2018 M892_22715 638585b972fa6e2be13a0cfc24e839f3 230 SMART SM00796 6 203 1.2E-60 T 12-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D M892_22715 638585b972fa6e2be13a0cfc24e839f3 230 Gene3D G3DSA:2.40.100.10 91 226 3.4E-46 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily M892_22715 638585b972fa6e2be13a0cfc24e839f3 230 Gene3D G3DSA:3.30.1360.40 6 82 1.9E-9 T 12-10-2018 M892_22715 638585b972fa6e2be13a0cfc24e839f3 230 SUPERFAMILY SSF50891 93 220 1.21E-34 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily M892_25990 df957e75f4293a2feb02171941b98721 395 Pfam PF04865 Baseplate J-like protein 84 326 6.8E-33 T 12-10-2018 IPR006949 Baseplate protein J-like M892_12460 f7602eafbc5009180d81dc842db77def 367 Pfam PF11104 Type IV pilus assembly protein PilM; 37 355 8.0E-51 T 12-10-2018 IPR005883 Type IV pilus assembly protein PilM M892_12460 f7602eafbc5009180d81dc842db77def 367 Gene3D G3DSA:3.30.420.40 211 321 1.1E-45 T 12-10-2018 M892_12460 f7602eafbc5009180d81dc842db77def 367 Gene3D G3DSA:3.30.1490.300 111 170 1.1E-45 T 12-10-2018 M892_12460 f7602eafbc5009180d81dc842db77def 367 SUPERFAMILY SSF53067 34 194 5.07E-8 T 12-10-2018 M892_12460 f7602eafbc5009180d81dc842db77def 367 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 34 356 1.6E-74 T 12-10-2018 IPR005883 Type IV pilus assembly protein PilM M892_12460 f7602eafbc5009180d81dc842db77def 367 Gene3D G3DSA:3.30.420.40 37 354 1.1E-45 T 12-10-2018 M892_12460 f7602eafbc5009180d81dc842db77def 367 SMART SM00842 35 198 0.0045 T 12-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 M892_12460 f7602eafbc5009180d81dc842db77def 367 PIRSF PIRSF019169 22 357 9.9E-91 T 12-10-2018 IPR005883 Type IV pilus assembly protein PilM M892_11400 a90888b507b5da446178b3d80ab51346 218 Gene3D G3DSA:3.30.70.330 111 217 4.8E-26 T 12-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily M892_11400 a90888b507b5da446178b3d80ab51346 218 SUPERFAMILY SSF54928 117 209 9.67E-27 T 12-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 M892_11400 a90888b507b5da446178b3d80ab51346 218 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 131 200 2.7E-17 T 12-10-2018 IPR000504 RNA recognition motif domain GO:0003676 M892_11400 a90888b507b5da446178b3d80ab51346 218 SMART SM00360 130 202 1.4E-20 T 12-10-2018 IPR000504 RNA recognition motif domain GO:0003676 M892_20280 3ad526ee9400025374e28dd6ba4d11d0 176 SUPERFAMILY SSF55729 3 164 3.01E-42 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_20280 3ad526ee9400025374e28dd6ba4d11d0 176 Gene3D G3DSA:3.40.630.30 5 173 9.6E-52 T 12-10-2018 M892_20280 3ad526ee9400025374e28dd6ba4d11d0 176 Pfam PF13302 Acetyltransferase (GNAT) domain 5 139 3.2E-21 T 12-10-2018 IPR000182 GNAT domain M892_10450 7285fc9dba2e721045470a7c5da0b1e2 207 Pfam PF09186 Domain of unknown function (DUF1949) 143 196 3.1E-12 T 12-10-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal M892_10450 7285fc9dba2e721045470a7c5da0b1e2 207 Pfam PF01205 Uncharacterized protein family UPF0029 20 127 4.1E-26 T 12-10-2018 IPR001498 Impact, N-terminal M892_10450 7285fc9dba2e721045470a7c5da0b1e2 207 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 6 200 1.0E-66 T 12-10-2018 IPR015796 Impact family, bacterial/archaeal M892_10450 7285fc9dba2e721045470a7c5da0b1e2 207 Gene3D G3DSA:3.30.230.30 3 136 1.4E-49 T 12-10-2018 IPR036956 Impact, N-terminal domain superfamily M892_10450 7285fc9dba2e721045470a7c5da0b1e2 207 SUPERFAMILY SSF54980 139 204 8.34E-10 T 12-10-2018 IPR035647 EF-G domain III/V-like M892_10450 7285fc9dba2e721045470a7c5da0b1e2 207 SUPERFAMILY SSF54211 5 134 7.97E-42 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold M892_13525 8d7e6324bf3dfde40a3640b06ea2bf38 453 Pfam PF13006 Insertion element 4 transposase N-terminal 35 125 9.7E-21 T 12-10-2018 IPR024473 Transposase, IS4, N-terminal M892_13525 8d7e6324bf3dfde40a3640b06ea2bf38 453 Pfam PF01609 Transposase DDE domain 145 368 7.2E-18 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_13525 8d7e6324bf3dfde40a3640b06ea2bf38 453 SUPERFAMILY SSF53098 117 380 4.63E-23 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_01325 1426186f0039bb5d9135a062eefabc82 578 Gene3D G3DSA:1.10.287.950 247 578 2.6E-71 T 12-10-2018 M892_01325 1426186f0039bb5d9135a062eefabc82 578 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 363 543 5.2E-41 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M892_01325 1426186f0039bb5d9135a062eefabc82 578 SUPERFAMILY SSF58104 268 577 2.62E-74 T 12-10-2018 M892_01325 1426186f0039bb5d9135a062eefabc82 578 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 442 471 5.9E-6 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M892_01325 1426186f0039bb5d9135a062eefabc82 578 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 329 358 5.9E-6 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M892_01325 1426186f0039bb5d9135a062eefabc82 578 SMART SM00283 312 576 3.3E-62 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M892_01325 1426186f0039bb5d9135a062eefabc82 578 SMART SM00304 246 300 1.2E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M892_16230 0ba1272cb582d894dbb26ba618e7d940 555 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 100 121 - T 12-10-2018 IPR023765 Solute-binding protein family 5, conserved site M892_16230 0ba1272cb582d894dbb26ba618e7d940 555 SUPERFAMILY SSF53850 49 548 1.81E-144 T 12-10-2018 M892_16230 0ba1272cb582d894dbb26ba618e7d940 555 PIRSF PIRSF002741 11 555 8.6E-116 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 M892_16230 0ba1272cb582d894dbb26ba618e7d940 555 Gene3D G3DSA:3.40.190.10 55 536 1.8E-189 T 12-10-2018 M892_16230 0ba1272cb582d894dbb26ba618e7d940 555 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 96 473 1.6E-93 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain M892_16230 0ba1272cb582d894dbb26ba618e7d940 555 Gene3D G3DSA:3.90.76.10 84 207 1.8E-189 T 12-10-2018 M892_16230 0ba1272cb582d894dbb26ba618e7d940 555 Gene3D G3DSA:3.10.105.10 309 524 1.8E-189 T 12-10-2018 M892_11825 bfa564bbb9f05b647aefaaaacc71aa9e 611 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 611 38.686 T 12-10-2018 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 M892_11825 bfa564bbb9f05b647aefaaaacc71aa9e 611 Gene3D G3DSA:2.60.40.1250 35 169 4.3E-40 T 12-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily M892_11825 bfa564bbb9f05b647aefaaaacc71aa9e 611 Pfam PF13899 Thioredoxin-like 501 581 3.5E-15 T 12-10-2018 M892_11825 bfa564bbb9f05b647aefaaaacc71aa9e 611 ProSitePatterns PS00194 Thioredoxin family active site. 520 538 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 M892_11825 bfa564bbb9f05b647aefaaaacc71aa9e 611 SUPERFAMILY SSF74863 39 152 2.22E-40 T 12-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily M892_11825 bfa564bbb9f05b647aefaaaacc71aa9e 611 Pfam PF11412 Disulphide bond corrector protein DsbC 41 150 6.4E-29 T 12-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain M892_11825 bfa564bbb9f05b647aefaaaacc71aa9e 611 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 219 419 9.5E-18 T 12-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 M892_11825 bfa564bbb9f05b647aefaaaacc71aa9e 611 Gene3D G3DSA:3.40.30.10 484 611 1.1E-34 T 12-10-2018 M892_11825 bfa564bbb9f05b647aefaaaacc71aa9e 611 SUPERFAMILY SSF52833 494 609 1.57E-22 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M892_27305 defabc36cc51bff84c66d746dd781882 98 Pfam PF13586 Transposase DDE domain 31 86 2.0E-10 T 12-10-2018 IPR025668 Transposase DDE domain M892_07735 bfae25837bfae8c724fa0ac3099dfae3 232 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 10 219 3.6E-75 T 12-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 M892_07735 bfae25837bfae8c724fa0ac3099dfae3 232 Gene3D G3DSA:1.20.58.220 118 230 3.4E-34 T 12-10-2018 IPR038078 PhoU-like domain superfamily M892_07735 bfae25837bfae8c724fa0ac3099dfae3 232 SUPERFAMILY SSF109755 10 224 8.16E-70 T 12-10-2018 M892_07735 bfae25837bfae8c724fa0ac3099dfae3 232 PIRSF PIRSF003107 4 223 6.0E-70 T 12-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 M892_07735 bfae25837bfae8c724fa0ac3099dfae3 232 Pfam PF01895 PhoU domain 23 108 3.2E-23 T 12-10-2018 IPR026022 PhoU domain M892_07735 bfae25837bfae8c724fa0ac3099dfae3 232 Pfam PF01895 PhoU domain 128 210 2.1E-16 T 12-10-2018 IPR026022 PhoU domain M892_07735 bfae25837bfae8c724fa0ac3099dfae3 232 Gene3D G3DSA:1.20.58.220 2 117 5.7E-41 T 12-10-2018 IPR038078 PhoU-like domain superfamily M892_25035 903f147990d736f5c060cd831f67debb 167 Gene3D G3DSA:3.10.180.10 5 155 1.2E-24 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M892_25035 903f147990d736f5c060cd831f67debb 167 SUPERFAMILY SSF54593 6 157 4.43E-29 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M892_25035 903f147990d736f5c060cd831f67debb 167 TIGRFAM TIGR03645 glyox_marine: lactoylglutathione lyase family protein 5 166 2.3E-105 T 12-10-2018 IPR019883 Lactoylglutathione lyase M892_25035 903f147990d736f5c060cd831f67debb 167 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 152 3.9E-12 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain M892_11925 f92389cfd5179c6de1668369f82b43c0 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 49.27 T 12-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 M892_11925 f92389cfd5179c6de1668369f82b43c0 188 SUPERFAMILY SSF50249 70 128 1.29E-17 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M892_11925 f92389cfd5179c6de1668369f82b43c0 188 SUPERFAMILY SSF50104 2 64 2.26E-20 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily M892_11925 f92389cfd5179c6de1668369f82b43c0 188 SMART SM01185 69 123 2.8E-26 T 12-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 M892_11925 f92389cfd5179c6de1668369f82b43c0 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 4.5E-25 T 12-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 M892_11925 f92389cfd5179c6de1668369f82b43c0 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 12-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site M892_11925 f92389cfd5179c6de1668369f82b43c0 188 SUPERFAMILY SSF50249 130 187 8.74E-18 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M892_11925 f92389cfd5179c6de1668369f82b43c0 188 Gene3D G3DSA:2.30.30.30 1 64 9.0E-26 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 M892_11925 f92389cfd5179c6de1668369f82b43c0 188 Gene3D G3DSA:2.40.50.140 66 129 1.9E-29 T 12-10-2018 M892_11925 f92389cfd5179c6de1668369f82b43c0 188 TIGRFAM TIGR00038 efp: translation elongation factor P 5 187 3.1E-77 T 12-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 M892_11925 f92389cfd5179c6de1668369f82b43c0 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 5.9E-23 T 12-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 M892_11925 f92389cfd5179c6de1668369f82b43c0 188 SMART SM00841 131 186 1.5E-30 T 12-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 M892_11925 f92389cfd5179c6de1668369f82b43c0 188 PIRSF PIRSF005901 2 188 4.3E-63 T 12-10-2018 IPR020599 Translation elongation factor P/YeiP M892_11925 f92389cfd5179c6de1668369f82b43c0 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 61 3.4E-24 T 12-10-2018 IPR013185 Translation elongation factor, KOW-like M892_11925 f92389cfd5179c6de1668369f82b43c0 188 Gene3D G3DSA:2.40.50.140 130 188 7.4E-27 T 12-10-2018 M892_05130 3cb06d3fee3d83708ebae6c6c8c21df8 483 SUPERFAMILY SSF58104 231 480 3.92E-47 T 12-10-2018 M892_05130 3cb06d3fee3d83708ebae6c6c8c21df8 483 Gene3D G3DSA:1.10.287.950 180 482 2.6E-50 T 12-10-2018 M892_05130 3cb06d3fee3d83708ebae6c6c8c21df8 483 SMART SM00283 244 477 1.2E-34 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M892_05130 3cb06d3fee3d83708ebae6c6c8c21df8 483 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 405 434 2.4E-26 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M892_05130 3cb06d3fee3d83708ebae6c6c8c21df8 483 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 328 355 2.4E-26 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M892_05130 3cb06d3fee3d83708ebae6c6c8c21df8 483 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 357 386 2.4E-26 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M892_05130 3cb06d3fee3d83708ebae6c6c8c21df8 483 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 251 280 2.4E-26 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M892_05130 3cb06d3fee3d83708ebae6c6c8c21df8 483 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 289 454 4.1E-34 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M892_24750 28478ae6b1e70912a06063619617bc11 425 Gene3D G3DSA:2.30.40.10 8 409 2.7E-177 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 M892_24750 28478ae6b1e70912a06063619617bc11 425 SUPERFAMILY SSF51338 1 76 3.54E-7 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 M892_24750 28478ae6b1e70912a06063619617bc11 425 SUPERFAMILY SSF51556 54 372 5.22E-105 T 12-10-2018 IPR032466 Metal-dependent hydrolase M892_24750 28478ae6b1e70912a06063619617bc11 425 Pfam PF07969 Amidohydrolase family 42 403 2.9E-53 T 12-10-2018 IPR013108 Amidohydrolase 3 M892_24750 28478ae6b1e70912a06063619617bc11 425 Gene3D G3DSA:3.20.20.140 55 362 2.7E-177 T 12-10-2018 M892_13390 a06cf92f57eb7759c6c7a3dccf65511b 559 Pfam PF00890 FAD binding domain 34 416 4.2E-101 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 M892_13390 a06cf92f57eb7759c6c7a3dccf65511b 559 Gene3D G3DSA:3.90.700.10 272 382 1.8E-154 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 M892_13390 a06cf92f57eb7759c6c7a3dccf65511b 559 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 31 544 1.1E-210 T 12-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 M892_13390 a06cf92f57eb7759c6c7a3dccf65511b 559 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 35 54 8.3E-9 T 12-10-2018 M892_13390 a06cf92f57eb7759c6c7a3dccf65511b 559 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 379 401 8.3E-9 T 12-10-2018 M892_13390 a06cf92f57eb7759c6c7a3dccf65511b 559 Gene3D G3DSA:3.50.50.60 34 428 1.8E-154 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_13390 a06cf92f57eb7759c6c7a3dccf65511b 559 Pfam PF02910 Fumarate reductase flavoprotein C-term 465 545 9.4E-15 T 12-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 M892_13390 a06cf92f57eb7759c6c7a3dccf65511b 559 SUPERFAMILY SSF51905 28 471 1.19E-75 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_13390 a06cf92f57eb7759c6c7a3dccf65511b 559 SUPERFAMILY SSF56425 262 377 1.94E-42 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 M892_13390 a06cf92f57eb7759c6c7a3dccf65511b 559 Gene3D G3DSA:1.20.58.100 449 559 8.1E-45 T 12-10-2018 M892_13390 a06cf92f57eb7759c6c7a3dccf65511b 559 PIRSF PIRSF000171 23 274 4.7E-28 T 12-10-2018 M892_13390 a06cf92f57eb7759c6c7a3dccf65511b 559 PIRSF PIRSF000171 360 556 8.2E-14 T 12-10-2018 M892_13390 a06cf92f57eb7759c6c7a3dccf65511b 559 SUPERFAMILY SSF46977 449 548 2.75E-32 T 12-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 M892_02220 00d662aa20babc47fc77911c48e7730d 394 Gene3D G3DSA:3.40.50.2000 172 353 1.1E-57 T 12-10-2018 M892_02220 00d662aa20babc47fc77911c48e7730d 394 Gene3D G3DSA:3.40.50.2000 19 363 1.1E-57 T 12-10-2018 M892_02220 00d662aa20babc47fc77911c48e7730d 394 Pfam PF13439 Glycosyltransferase Family 4 18 175 8.4E-15 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 M892_02220 00d662aa20babc47fc77911c48e7730d 394 SUPERFAMILY SSF53756 7 369 5.83E-68 T 12-10-2018 M892_02220 00d662aa20babc47fc77911c48e7730d 394 Pfam PF00534 Glycosyl transferases group 1 185 347 2.1E-30 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 M892_18090 5e4b6fd731855284a2efa18f02c17af6 171 Pfam PF13412 Winged helix-turn-helix DNA-binding 26 73 3.1E-18 T 12-10-2018 M892_18090 5e4b6fd731855284a2efa18f02c17af6 171 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 53 72 3.2E-17 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 M892_18090 5e4b6fd731855284a2efa18f02c17af6 171 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 42 53 3.2E-17 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 M892_18090 5e4b6fd731855284a2efa18f02c17af6 171 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 26 42 3.2E-17 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 M892_18090 5e4b6fd731855284a2efa18f02c17af6 171 SUPERFAMILY SSF54909 88 170 7.24E-16 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel M892_18090 5e4b6fd731855284a2efa18f02c17af6 171 Gene3D G3DSA:1.10.10.10 16 79 2.6E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_18090 5e4b6fd731855284a2efa18f02c17af6 171 Gene3D G3DSA:3.30.70.920 80 162 3.0E-19 T 12-10-2018 M892_18090 5e4b6fd731855284a2efa18f02c17af6 171 ProSitePatterns PS00519 AsnC-type HTH domain signature. 44 70 - T 12-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site M892_18090 5e4b6fd731855284a2efa18f02c17af6 171 SUPERFAMILY SSF46785 25 85 6.11E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_18090 5e4b6fd731855284a2efa18f02c17af6 171 SMART SM00344 26 135 1.9E-35 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 M892_18090 5e4b6fd731855284a2efa18f02c17af6 171 Pfam PF01037 Lrp/AsnC ligand binding domain 92 166 4.5E-16 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain M892_16420 bea7bfbf797e4a9435c7dd3c99d1cd7f 245 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 216 2.8E-5 T 12-10-2018 M892_16420 bea7bfbf797e4a9435c7dd3c99d1cd7f 245 SUPERFAMILY SSF51735 5 244 3.71E-87 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_16420 bea7bfbf797e4a9435c7dd3c99d1cd7f 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 M892_16420 bea7bfbf797e4a9435c7dd3c99d1cd7f 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 242 8.4E-67 T 12-10-2018 M892_16420 bea7bfbf797e4a9435c7dd3c99d1cd7f 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 8.6E-53 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_16420 bea7bfbf797e4a9435c7dd3c99d1cd7f 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 8.6E-53 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_16420 bea7bfbf797e4a9435c7dd3c99d1cd7f 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 8.6E-53 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_16420 bea7bfbf797e4a9435c7dd3c99d1cd7f 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 8.6E-53 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_16420 bea7bfbf797e4a9435c7dd3c99d1cd7f 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 8.6E-53 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_16420 bea7bfbf797e4a9435c7dd3c99d1cd7f 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 8.6E-53 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_16420 bea7bfbf797e4a9435c7dd3c99d1cd7f 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 5.6E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_16420 bea7bfbf797e4a9435c7dd3c99d1cd7f 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 5.6E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_16420 bea7bfbf797e4a9435c7dd3c99d1cd7f 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 5.6E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_16420 bea7bfbf797e4a9435c7dd3c99d1cd7f 245 Gene3D G3DSA:3.40.50.720 1 245 1.0E-88 T 12-10-2018 M892_16420 bea7bfbf797e4a9435c7dd3c99d1cd7f 245 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 9 243 3.3E-100 T 12-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 M892_02570 549f13104bbcd746c53a93825e55a32d 78 Gene3D G3DSA:1.10.246.40 1 65 2.0E-26 T 12-10-2018 IPR038215 Transposase, Tn5-like, N-terminal domain superfamily M892_02570 549f13104bbcd746c53a93825e55a32d 78 Pfam PF14706 Transposase DNA-binding 9 65 1.2E-18 T 12-10-2018 IPR014735 Transposase, Tn5-like, N-terminal M892_02570 549f13104bbcd746c53a93825e55a32d 78 SUPERFAMILY SSF53098 1 68 2.35E-13 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_05055 29a9f67341ffce1f3c270d9510bd9de4 347 Gene3D G3DSA:3.40.50.720 112 233 3.2E-11 T 12-10-2018 M892_05055 29a9f67341ffce1f3c270d9510bd9de4 347 SUPERFAMILY SSF81324 4 132 2.88E-17 T 12-10-2018 M892_05055 29a9f67341ffce1f3c270d9510bd9de4 347 SUPERFAMILY SSF51735 121 239 5.91E-11 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_05055 29a9f67341ffce1f3c270d9510bd9de4 347 Pfam PF07885 Ion channel 29 99 3.7E-14 T 12-10-2018 IPR013099 Potassium channel domain M892_05055 29a9f67341ffce1f3c270d9510bd9de4 347 Gene3D G3DSA:1.10.287.70 20 101 1.4E-12 T 12-10-2018 M892_05560 1afdc8ad1ac7555a7918d2b87bd57e88 107 Gene3D G3DSA:3.30.70.20 2 103 1.8E-25 T 12-10-2018 M892_05560 1afdc8ad1ac7555a7918d2b87bd57e88 107 Pfam PF11953 Domain of unknown function (DUF3470) 68 107 9.9E-17 T 12-10-2018 IPR022569 Ferredoxin, C-terminal M892_05560 1afdc8ad1ac7555a7918d2b87bd57e88 107 SUPERFAMILY SSF54862 3 96 1.22E-22 T 12-10-2018 M892_05560 1afdc8ad1ac7555a7918d2b87bd57e88 107 Pfam PF13187 4Fe-4S dicluster domain 8 55 7.2E-7 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M892_05560 1afdc8ad1ac7555a7918d2b87bd57e88 107 PRINTS PR00354 7Fe ferredoxin signature 9 19 5.1E-11 T 12-10-2018 IPR000813 7Fe ferredoxin GO:0009055 M892_05560 1afdc8ad1ac7555a7918d2b87bd57e88 107 PRINTS PR00354 7Fe ferredoxin signature 35 52 5.1E-11 T 12-10-2018 IPR000813 7Fe ferredoxin GO:0009055 M892_05560 1afdc8ad1ac7555a7918d2b87bd57e88 107 PRINTS PR00354 7Fe ferredoxin signature 19 29 5.1E-11 T 12-10-2018 IPR000813 7Fe ferredoxin GO:0009055 M892_17285 73655281f1875c8a897f69eeb7130426 420 Pfam PF09375 Imelysin 40 397 7.6E-97 T 12-10-2018 IPR018976 Imelysin-like domain M892_17285 73655281f1875c8a897f69eeb7130426 420 Gene3D G3DSA:1.20.1420.20 16 402 2.8E-85 T 12-10-2018 IPR038352 Imelysin-like domain superfamily M892_16610 1545567113b2b7729fd4177797ee3908 1024 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 4 969 2.5E-155 T 12-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M892_16610 1545567113b2b7729fd4177797ee3908 1024 Pfam PF14579 Helix-hairpin-helix motif 768 855 5.7E-15 T 12-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M892_16610 1545567113b2b7729fd4177797ee3908 1024 SMART SM00481 4 73 3.5E-7 T 12-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal M892_16610 1545567113b2b7729fd4177797ee3908 1024 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 270 694 1.6E-148 T 12-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M892_16610 1545567113b2b7729fd4177797ee3908 1024 Pfam PF01336 OB-fold nucleic acid binding domain 934 997 6.7E-9 T 12-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 M892_16610 1545567113b2b7729fd4177797ee3908 1024 Gene3D G3DSA:3.20.20.140 1 247 6.6E-35 T 12-10-2018 M892_16610 1545567113b2b7729fd4177797ee3908 1024 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 3 1024 13.147 T 12-10-2018 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M892_16610 1545567113b2b7729fd4177797ee3908 1024 Pfam PF02811 PHP domain 8 99 2.1E-8 T 12-10-2018 IPR004013 PHP domain GO:0003824 M892_26300 fa43815202869a8130ca538562754b7b 450 Gene3D G3DSA:3.40.50.12240 22 448 2.7E-151 T 12-10-2018 M892_26300 fa43815202869a8130ca538562754b7b 450 SUPERFAMILY SSF52540 102 370 1.9E-95 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_26300 fa43815202869a8130ca538562754b7b 450 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 14 445 1.9E-164 T 12-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M892_26300 fa43815202869a8130ca538562754b7b 450 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 356 365 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M892_26300 fa43815202869a8130ca538562754b7b 450 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 154 365 1.5E-72 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M892_26300 fa43815202869a8130ca538562754b7b 450 SMART SM00382 166 349 9.2E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_26300 fa43815202869a8130ca538562754b7b 450 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 31 443 6.1E-189 T 12-10-2018 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M892_08115 d986661e9c8aa5ad9202cec0292e5b5d 579 SUPERFAMILY SSF64182 45 464 2.88E-119 T 12-10-2018 IPR038763 DHH phosphoesterase superfamily M892_08115 d986661e9c8aa5ad9202cec0292e5b5d 579 Pfam PF01368 DHH family 71 205 2.6E-9 T 12-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 M892_08115 d986661e9c8aa5ad9202cec0292e5b5d 579 Pfam PF02272 DHHA1 domain 319 451 8.5E-27 T 12-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 M892_08115 d986661e9c8aa5ad9202cec0292e5b5d 579 Gene3D G3DSA:3.10.310.30 325 456 1.4E-30 T 12-10-2018 M892_08115 d986661e9c8aa5ad9202cec0292e5b5d 579 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 20 574 1.1E-158 T 12-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 M892_08115 d986661e9c8aa5ad9202cec0292e5b5d 579 Gene3D G3DSA:3.90.1640.30 45 323 2.3E-89 T 12-10-2018 M892_19575 fa834b4c3c209c62fc220983ffa88f35 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 6.6E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_19575 fa834b4c3c209c62fc220983ffa88f35 294 Gene3D G3DSA:3.40.190.290 93 294 4.0E-21 T 12-10-2018 M892_19575 fa834b4c3c209c62fc220983ffa88f35 294 SUPERFAMILY SSF46785 2 109 5.39E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_19575 fa834b4c3c209c62fc220983ffa88f35 294 Pfam PF03466 LysR substrate binding domain 89 291 1.2E-27 T 12-10-2018 IPR005119 LysR, substrate-binding M892_19575 fa834b4c3c209c62fc220983ffa88f35 294 Gene3D G3DSA:1.10.10.10 1 92 7.7E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_19575 fa834b4c3c209c62fc220983ffa88f35 294 SUPERFAMILY SSF53850 89 293 1.15E-28 T 12-10-2018 M892_15385 2a9c5f8c50d5f6039c6c0bbd07e6eac9 205 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 2 203 1.6E-77 T 12-10-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004 M892_15385 2a9c5f8c50d5f6039c6c0bbd07e6eac9 205 SMART SM00382 26 205 1.6E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_15385 2a9c5f8c50d5f6039c6c0bbd07e6eac9 205 Gene3D G3DSA:3.40.50.300 1 196 5.0E-42 T 12-10-2018 M892_15385 2a9c5f8c50d5f6039c6c0bbd07e6eac9 205 SUPERFAMILY SSF52540 2 193 1.04E-39 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_15385 2a9c5f8c50d5f6039c6c0bbd07e6eac9 205 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_15385 2a9c5f8c50d5f6039c6c0bbd07e6eac9 205 Pfam PF00005 ABC transporter 18 158 4.1E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_01035 6ec49d2495c78768048029d16153b934 173 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 1 171 1.1E-36 T 12-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 M892_01035 6ec49d2495c78768048029d16153b934 173 Gene3D G3DSA:3.90.1140.10 1 173 3.8E-38 T 12-10-2018 M892_01035 6ec49d2495c78768048029d16153b934 173 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 1 173 20.368 T 12-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 M892_01035 6ec49d2495c78768048029d16153b934 173 SUPERFAMILY SSF55144 1 171 1.24E-31 T 12-10-2018 IPR009097 Cyclic phosphodiesterase M892_01035 6ec49d2495c78768048029d16153b934 173 Pfam PF13563 2'-5' RNA ligase superfamily 21 156 7.1E-15 T 12-10-2018 M892_26485 e822d1cfff7094d88391a865f9219d2a 393 SUPERFAMILY SSF55920 165 384 3.93E-57 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like M892_26485 e822d1cfff7094d88391a865f9219d2a 393 PRINTS PR00599 Methionine aminopeptidase-1 signature 245 261 9.4E-7 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 M892_26485 e822d1cfff7094d88391a865f9219d2a 393 PRINTS PR00599 Methionine aminopeptidase-1 signature 343 355 9.4E-7 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 M892_26485 e822d1cfff7094d88391a865f9219d2a 393 Pfam PF00557 Metallopeptidase family M24 173 375 5.6E-40 T 12-10-2018 IPR000994 Peptidase M24 M892_26485 e822d1cfff7094d88391a865f9219d2a 393 Pfam PF01321 Creatinase/Prolidase N-terminal domain 21 165 1.5E-15 T 12-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 M892_26485 e822d1cfff7094d88391a865f9219d2a 393 Gene3D G3DSA:3.90.230.10 164 387 6.9E-52 T 12-10-2018 M892_26485 e822d1cfff7094d88391a865f9219d2a 393 Gene3D G3DSA:3.40.350.10 9 163 5.9E-28 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal M892_26485 e822d1cfff7094d88391a865f9219d2a 393 SUPERFAMILY SSF53092 5 163 1.92E-33 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal M892_20930 c21f7e9afb055a3bdcb9520afef1dbc0 326 SUPERFAMILY SSF52540 17 277 5.14E-21 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_20930 c21f7e9afb055a3bdcb9520afef1dbc0 326 Pfam PF05621 Bacterial TniB protein 15 268 2.5E-39 T 12-10-2018 IPR008868 Bacterial TniB M892_20930 c21f7e9afb055a3bdcb9520afef1dbc0 326 Gene3D G3DSA:3.40.50.300 21 196 2.4E-13 T 12-10-2018 M892_19275 895dfdade55ee0fd77e165f6293b1d7a 152 Gene3D G3DSA:3.40.630.30 1 152 9.6E-43 T 12-10-2018 M892_19275 895dfdade55ee0fd77e165f6293b1d7a 152 Pfam PF00583 Acetyltransferase (GNAT) family 27 129 1.9E-14 T 12-10-2018 IPR000182 GNAT domain M892_19275 895dfdade55ee0fd77e165f6293b1d7a 152 SUPERFAMILY SSF55729 11 145 2.23E-26 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_19665 3e080e4baeee2dc687e263aaa57f23ef 338 SUPERFAMILY SSF55073 192 336 1.02E-38 T 12-10-2018 IPR029787 Nucleotide cyclase M892_19665 3e080e4baeee2dc687e263aaa57f23ef 338 SMART SM00267 176 337 5.8E-41 T 12-10-2018 IPR000160 GGDEF domain M892_19665 3e080e4baeee2dc687e263aaa57f23ef 338 Pfam PF00990 Diguanylate cyclase, GGDEF domain 189 336 1.6E-36 T 12-10-2018 IPR000160 GGDEF domain M892_19665 3e080e4baeee2dc687e263aaa57f23ef 338 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 184 336 6.4E-34 T 12-10-2018 IPR000160 GGDEF domain M892_19665 3e080e4baeee2dc687e263aaa57f23ef 338 Gene3D G3DSA:3.30.70.270 180 338 5.6E-42 T 12-10-2018 M892_12260 66a3a707fac923edbf0ef80c7c3e1c90 639 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_12260 66a3a707fac923edbf0ef80c7c3e1c90 639 Pfam PF00005 ABC transporter 328 459 3.4E-25 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_12260 66a3a707fac923edbf0ef80c7c3e1c90 639 SMART SM00382 26 223 1.2E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_12260 66a3a707fac923edbf0ef80c7c3e1c90 639 SMART SM00382 337 503 1.1E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_12260 66a3a707fac923edbf0ef80c7c3e1c90 639 Pfam PF12848 ABC transporter 217 295 2.6E-27 T 12-10-2018 IPR032781 ABC-transporter extension domain M892_12260 66a3a707fac923edbf0ef80c7c3e1c90 639 SUPERFAMILY SSF52540 276 494 1.59E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_12260 66a3a707fac923edbf0ef80c7c3e1c90 639 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_12260 66a3a707fac923edbf0ef80c7c3e1c90 639 Pfam PF00005 ABC transporter 17 178 3.4E-21 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_12260 66a3a707fac923edbf0ef80c7c3e1c90 639 Gene3D G3DSA:3.40.50.300 276 540 9.9E-55 T 12-10-2018 M892_12260 66a3a707fac923edbf0ef80c7c3e1c90 639 SUPERFAMILY SSF52540 2 258 1.8E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_12260 66a3a707fac923edbf0ef80c7c3e1c90 639 Gene3D G3DSA:3.40.50.300 7 273 2.1E-58 T 12-10-2018 M892_25105 af5041575b5ac1d2feb26f0735aa9dd3 345 Pfam PF01032 FecCD transport family 19 338 7.5E-92 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 M892_25105 af5041575b5ac1d2feb26f0735aa9dd3 345 SUPERFAMILY SSF81345 5 339 6.93E-84 T 12-10-2018 IPR037294 ABC transporter, BtuC-like M892_25105 af5041575b5ac1d2feb26f0735aa9dd3 345 Gene3D G3DSA:1.10.3470.10 5 344 5.4E-106 T 12-10-2018 IPR037294 ABC transporter, BtuC-like M892_00545 05a625b03a8d411c3dd8e552917464e2 257 Gene3D G3DSA:3.30.70.20 35 242 4.5E-75 T 12-10-2018 M892_00545 05a625b03a8d411c3dd8e552917464e2 257 Pfam PF12800 4Fe-4S binding domain 53 66 0.027 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M892_00545 05a625b03a8d411c3dd8e552917464e2 257 Pfam PF13247 4Fe-4S dicluster domain 93 186 2.3E-29 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M892_00545 05a625b03a8d411c3dd8e552917464e2 257 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 131 142 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M892_00545 05a625b03a8d411c3dd8e552917464e2 257 SUPERFAMILY SSF54862 43 224 2.62E-76 T 12-10-2018 M892_20440 dab19ee8763c4d7f38ed95f462f176d5 778 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 3 123 1.0E-7 T 12-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal M892_20440 dab19ee8763c4d7f38ed95f462f176d5 778 SUPERFAMILY SSF55545 2 126 8.11E-22 T 12-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 M892_20440 dab19ee8763c4d7f38ed95f462f176d5 778 Gene3D G3DSA:3.30.379.10 1 125 1.7E-15 T 12-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 M892_20440 dab19ee8763c4d7f38ed95f462f176d5 778 PRINTS PR00738 Glycosyl hydrolase family 20 signature 202 219 3.4E-41 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 M892_20440 dab19ee8763c4d7f38ed95f462f176d5 778 PRINTS PR00738 Glycosyl hydrolase family 20 signature 252 270 3.4E-41 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 M892_20440 dab19ee8763c4d7f38ed95f462f176d5 778 PRINTS PR00738 Glycosyl hydrolase family 20 signature 121 138 3.4E-41 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 M892_20440 dab19ee8763c4d7f38ed95f462f176d5 778 PRINTS PR00738 Glycosyl hydrolase family 20 signature 86 106 3.4E-41 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 M892_20440 dab19ee8763c4d7f38ed95f462f176d5 778 PRINTS PR00738 Glycosyl hydrolase family 20 signature 274 287 3.4E-41 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 M892_20440 dab19ee8763c4d7f38ed95f462f176d5 778 PRINTS PR00738 Glycosyl hydrolase family 20 signature 150 171 3.4E-41 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 M892_20440 dab19ee8763c4d7f38ed95f462f176d5 778 Gene3D G3DSA:3.20.20.80 126 409 8.2E-89 T 12-10-2018 M892_20440 dab19ee8763c4d7f38ed95f462f176d5 778 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 127 566 6.7E-112 T 12-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 M892_20440 dab19ee8763c4d7f38ed95f462f176d5 778 Gene3D G3DSA:3.20.20.80 513 595 3.9E-14 T 12-10-2018 M892_20440 dab19ee8763c4d7f38ed95f462f176d5 778 SUPERFAMILY SSF51445 127 582 6.74E-96 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily M892_17300 733951e4ac6d842bdad78357c2ebe10a 360 Pfam PF07433 Protein of unknown function (DUF1513) 67 359 1.3E-111 T 12-10-2018 IPR008311 Uncharacterised conserved protein UCP028101 M892_17300 733951e4ac6d842bdad78357c2ebe10a 360 PIRSF PIRSF028101 4 360 5.8E-163 T 12-10-2018 IPR008311 Uncharacterised conserved protein UCP028101 M892_17300 733951e4ac6d842bdad78357c2ebe10a 360 SUPERFAMILY SSF82171 59 307 5.89E-10 T 12-10-2018 M892_04140 3ee6e6f7ba9281720efff27c07906245 425 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 10 418 7.6E-178 T 12-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 M892_04140 3ee6e6f7ba9281720efff27c07906245 425 Pfam PF00202 Aminotransferase class-III 24 418 4.1E-128 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 M892_04140 3ee6e6f7ba9281720efff27c07906245 425 SUPERFAMILY SSF53383 4 420 7.54E-136 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M892_04140 3ee6e6f7ba9281720efff27c07906245 425 PIRSF PIRSF000521 24 421 3.7E-35 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 M892_04140 3ee6e6f7ba9281720efff27c07906245 425 Gene3D G3DSA:3.90.1150.10 7 412 4.1E-170 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M892_04140 3ee6e6f7ba9281720efff27c07906245 425 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 1 421 48.761 T 12-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 M892_04140 3ee6e6f7ba9281720efff27c07906245 425 Gene3D G3DSA:3.40.640.10 58 327 4.1E-170 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M892_04140 3ee6e6f7ba9281720efff27c07906245 425 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 239 276 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 M892_13225 2f8d523f5e0241600fd9b05eb4566abf 272 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 5 99 1.8E-26 T 12-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal M892_13225 2f8d523f5e0241600fd9b05eb4566abf 272 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 268 25.446 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 M892_13225 2f8d523f5e0241600fd9b05eb4566abf 272 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 163 268 1.4E-30 T 12-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 M892_13225 2f8d523f5e0241600fd9b05eb4566abf 272 SUPERFAMILY SSF51735 4 160 1.53E-38 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_13225 2f8d523f5e0241600fd9b05eb4566abf 272 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 268 5.4E-75 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 M892_13225 2f8d523f5e0241600fd9b05eb4566abf 272 SUPERFAMILY SSF48179 163 270 1.48E-30 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 M892_13225 2f8d523f5e0241600fd9b05eb4566abf 272 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 224 246 - T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 M892_13225 2f8d523f5e0241600fd9b05eb4566abf 272 PIRSF PIRSF000193 3 270 4.9E-78 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 M892_13225 2f8d523f5e0241600fd9b05eb4566abf 272 Gene3D G3DSA:1.10.3730.10 165 272 6.1E-35 T 12-10-2018 M892_13225 2f8d523f5e0241600fd9b05eb4566abf 272 Gene3D G3DSA:3.40.50.720 2 164 8.1E-51 T 12-10-2018 M892_17895 b8045b7822e62712c271b7f4f533a6c7 857 SUPERFAMILY SSF54556 472 557 5.19E-17 T 12-10-2018 IPR029070 Chitinase insertion domain superfamily M892_17895 b8045b7822e62712c271b7f4f533a6c7 857 Gene3D G3DSA:3.10.50.10 477 562 1.1E-173 T 12-10-2018 IPR029070 Chitinase insertion domain superfamily M892_17895 b8045b7822e62712c271b7f4f533a6c7 857 SUPERFAMILY SSF49299 607 700 1.49E-7 T 12-10-2018 IPR035986 PKD domain superfamily M892_17895 b8045b7822e62712c271b7f4f533a6c7 857 SMART SM00636 170 586 1.4E-159 T 12-10-2018 IPR011583 Chitinase II GO:0008061 M892_17895 b8045b7822e62712c271b7f4f533a6c7 857 SUPERFAMILY SSF51445 146 599 1.05E-90 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily M892_17895 b8045b7822e62712c271b7f4f533a6c7 857 Pfam PF02839 Carbohydrate binding domain 823 848 2.4E-5 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 M892_17895 b8045b7822e62712c271b7f4f533a6c7 857 Gene3D G3DSA:2.60.40.10 33 143 3.1E-45 T 12-10-2018 IPR013783 Immunoglobulin-like fold M892_17895 b8045b7822e62712c271b7f4f533a6c7 857 Pfam PF00704 Glycosyl hydrolases family 18 173 586 1.7E-87 T 12-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 M892_17895 b8045b7822e62712c271b7f4f533a6c7 857 Gene3D G3DSA:2.60.40.10 705 796 1.3E-11 T 12-10-2018 IPR013783 Immunoglobulin-like fold M892_17895 b8045b7822e62712c271b7f4f533a6c7 857 SUPERFAMILY SSF81296 32 144 3.22E-31 T 12-10-2018 IPR014756 Immunoglobulin E-set M892_17895 b8045b7822e62712c271b7f4f533a6c7 857 Gene3D G3DSA:2.60.40.10 608 703 7.6E-23 T 12-10-2018 IPR013783 Immunoglobulin-like fold M892_17895 b8045b7822e62712c271b7f4f533a6c7 857 Gene3D G3DSA:2.10.10.20 806 849 4.3E-18 T 12-10-2018 M892_17895 b8045b7822e62712c271b7f4f533a6c7 857 Pfam PF08329 Chitinase A, N-terminal domain 32 167 6.6E-54 T 12-10-2018 IPR013540 Chitinase A N-terminal GO:0004568|GO:0006032 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 M892_17895 b8045b7822e62712c271b7f4f533a6c7 857 SMART SM00495 806 851 8.3E-15 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 M892_17895 b8045b7822e62712c271b7f4f533a6c7 857 ProSitePatterns PS01095 Chitinases family 18 active site. 318 326 - T 12-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 M892_17895 b8045b7822e62712c271b7f4f533a6c7 857 Gene3D G3DSA:3.20.20.80 173 588 1.1E-173 T 12-10-2018 M892_17895 b8045b7822e62712c271b7f4f533a6c7 857 SUPERFAMILY SSF51055 804 852 1.79E-14 T 12-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 M892_17895 b8045b7822e62712c271b7f4f533a6c7 857 SMART SM00089 66 145 1.2 T 12-10-2018 IPR022409 PKD/Chitinase domain M892_17895 b8045b7822e62712c271b7f4f533a6c7 857 SMART SM00089 712 798 1.8 T 12-10-2018 IPR022409 PKD/Chitinase domain M892_17895 b8045b7822e62712c271b7f4f533a6c7 857 SMART SM00089 611 701 0.019 T 12-10-2018 IPR022409 PKD/Chitinase domain M892_02880 4e361bbb533ac9b234f3cf0edcc04003 64 Pfam PF01632 Ribosomal protein L35 2 61 6.3E-21 T 12-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_02880 4e361bbb533ac9b234f3cf0edcc04003 64 SUPERFAMILY SSF143034 2 63 2.75E-20 T 12-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_02880 4e361bbb533ac9b234f3cf0edcc04003 64 Gene3D G3DSA:2.40.50.530 1 64 4.0E-18 T 12-10-2018 M892_02880 4e361bbb533ac9b234f3cf0edcc04003 64 PRINTS PR00064 Ribosomal protein L35 signature 35 53 5.1E-19 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 M892_02880 4e361bbb533ac9b234f3cf0edcc04003 64 PRINTS PR00064 Ribosomal protein L35 signature 3 20 5.1E-19 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 M892_02880 4e361bbb533ac9b234f3cf0edcc04003 64 PRINTS PR00064 Ribosomal protein L35 signature 20 34 5.1E-19 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 M892_02880 4e361bbb533ac9b234f3cf0edcc04003 64 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 63 17.885 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 M892_02880 4e361bbb533ac9b234f3cf0edcc04003 64 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 30 - T 12-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_02880 4e361bbb533ac9b234f3cf0edcc04003 64 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 63 1.6E-26 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 M892_05330 4f85c5a0bc66a4b61ff78a6b0e61d267 691 Hamap MF_02205 ATP-dependent DNA helicase DinG [dinG]. 33 690 36.837 T 12-10-2018 IPR039000 ATP-dependent DNA helicase DinG GO:0004003 M892_05330 4f85c5a0bc66a4b61ff78a6b0e61d267 691 Pfam PF06733 DEAD_2 197 263 6.5E-5 T 12-10-2018 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 M892_05330 4f85c5a0bc66a4b61ff78a6b0e61d267 691 SUPERFAMILY SSF52540 511 666 2.66E-6 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_05330 4f85c5a0bc66a4b61ff78a6b0e61d267 691 Gene3D G3DSA:3.40.50.300 498 689 1.3E-33 T 12-10-2018 M892_05330 4f85c5a0bc66a4b61ff78a6b0e61d267 691 Pfam PF13307 Helicase C-terminal domain 526 684 3.6E-36 T 12-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 M892_05330 4f85c5a0bc66a4b61ff78a6b0e61d267 691 SUPERFAMILY SSF52540 14 666 3.34E-16 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_05330 4f85c5a0bc66a4b61ff78a6b0e61d267 691 SMART SM00491 535 671 5.0E-27 T 12-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 M892_05330 4f85c5a0bc66a4b61ff78a6b0e61d267 691 Gene3D G3DSA:3.40.50.300 25 306 2.5E-40 T 12-10-2018 M892_12795 cf58cd0a178d9097ae1d74f185fdbf11 489 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 426 2.4E-173 T 12-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 M892_12795 cf58cd0a178d9097ae1d74f185fdbf11 489 Pfam PF00575 S1 RNA binding domain 38 109 2.5E-5 T 12-10-2018 IPR003029 S1 domain GO:0003676 M892_12795 cf58cd0a178d9097ae1d74f185fdbf11 489 Gene3D G3DSA:2.40.50.140 31 127 1.4E-31 T 12-10-2018 M892_12795 cf58cd0a178d9097ae1d74f185fdbf11 489 SMART SM00316 37 122 2.1E-9 T 12-10-2018 IPR022967 RNA-binding domain, S1 M892_12795 cf58cd0a178d9097ae1d74f185fdbf11 489 Gene3D G3DSA:3.40.1260.20 402 489 8.7E-7 T 12-10-2018 M892_12795 cf58cd0a178d9097ae1d74f185fdbf11 489 Pfam PF10150 Ribonuclease E/G family 124 393 3.3E-104 T 12-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 M892_12795 cf58cd0a178d9097ae1d74f185fdbf11 489 SUPERFAMILY SSF50249 39 128 3.52E-19 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M892_19400 531a93c095f1624750e10adc088432b6 808 Gene3D G3DSA:1.20.1050.60 399 501 2.3E-206 T 12-10-2018 M892_19400 531a93c095f1624750e10adc088432b6 808 Gene3D G3DSA:1.20.1610.10 502 671 2.3E-206 T 12-10-2018 M892_19400 531a93c095f1624750e10adc088432b6 808 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 43 796 1.1E-149 T 12-10-2018 IPR005887 Alpha-1,2-mannosidase, putative M892_19400 531a93c095f1624750e10adc088432b6 808 Pfam PF07971 Glycosyl hydrolase family 92 287 795 2.2E-138 T 12-10-2018 IPR012939 Glycosyl hydrolase family 92 M892_19400 531a93c095f1624750e10adc088432b6 808 Gene3D G3DSA:2.70.98.10 46 398 2.3E-206 T 12-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 M892_19400 531a93c095f1624750e10adc088432b6 808 SUPERFAMILY SSF48208 309 778 4.59E-22 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 M892_19400 531a93c095f1624750e10adc088432b6 808 Gene3D G3DSA:3.30.2080.10 344 798 2.3E-206 T 12-10-2018 M892_03105 67e264b35e1a954dc9fe8068bcbb494d 562 PRINTS PR00072 Malic enzyme signature 144 173 2.6E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 M892_03105 67e264b35e1a954dc9fe8068bcbb494d 562 PRINTS PR00072 Malic enzyme signature 180 202 2.6E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 M892_03105 67e264b35e1a954dc9fe8068bcbb494d 562 PRINTS PR00072 Malic enzyme signature 84 108 2.6E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 M892_03105 67e264b35e1a954dc9fe8068bcbb494d 562 PRINTS PR00072 Malic enzyme signature 405 421 2.6E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 M892_03105 67e264b35e1a954dc9fe8068bcbb494d 562 PRINTS PR00072 Malic enzyme signature 264 280 2.6E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 M892_03105 67e264b35e1a954dc9fe8068bcbb494d 562 PRINTS PR00072 Malic enzyme signature 295 311 2.6E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 M892_03105 67e264b35e1a954dc9fe8068bcbb494d 562 PRINTS PR00072 Malic enzyme signature 239 257 2.6E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 M892_03105 67e264b35e1a954dc9fe8068bcbb494d 562 Gene3D G3DSA:3.40.50.10380 13 265 3.9E-114 T 12-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 M892_03105 67e264b35e1a954dc9fe8068bcbb494d 562 Pfam PF00390 Malic enzyme, N-terminal domain 78 258 1.5E-77 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 M892_03105 67e264b35e1a954dc9fe8068bcbb494d 562 SUPERFAMILY SSF53223 4 267 1.58E-109 T 12-10-2018 M892_03105 67e264b35e1a954dc9fe8068bcbb494d 562 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 1 562 72.898 T 12-10-2018 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38|MetaCyc: PWY-6339 M892_03105 67e264b35e1a954dc9fe8068bcbb494d 562 SMART SM01274 78 258 3.1E-107 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 M892_03105 67e264b35e1a954dc9fe8068bcbb494d 562 SUPERFAMILY SSF51735 268 559 8.52E-97 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_03105 67e264b35e1a954dc9fe8068bcbb494d 562 ProSitePatterns PS00331 Malic enzymes signature. 264 280 - T 12-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 M892_03105 67e264b35e1a954dc9fe8068bcbb494d 562 SMART SM00919 268 528 2.8E-133 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 M892_03105 67e264b35e1a954dc9fe8068bcbb494d 562 PIRSF PIRSF000106 2 560 1.0E-225 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 M892_03105 67e264b35e1a954dc9fe8068bcbb494d 562 Pfam PF03949 Malic enzyme, NAD binding domain 268 528 5.3E-103 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 M892_03105 67e264b35e1a954dc9fe8068bcbb494d 562 Gene3D G3DSA:3.40.50.720 266 562 3.9E-110 T 12-10-2018 M892_23675 55e0de7f482497be95f24cb25c6da198 887 Gene3D G3DSA:2.20.25.90 6 51 6.3E-9 T 12-10-2018 M892_23675 55e0de7f482497be95f24cb25c6da198 887 Gene3D G3DSA:3.40.50.740 70 512 1.2E-155 T 12-10-2018 M892_23675 55e0de7f482497be95f24cb25c6da198 887 Gene3D G3DSA:3.40.228.10 135 338 1.2E-155 T 12-10-2018 M892_23675 55e0de7f482497be95f24cb25c6da198 887 PIRSF PIRSF036643 2 709 9.2E-125 T 12-10-2018 M892_23675 55e0de7f482497be95f24cb25c6da198 887 SMART SM00926 3 52 9.8E-9 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M892_23675 55e0de7f482497be95f24cb25c6da198 887 Pfam PF04324 BFD-like [2Fe-2S] binding domain 817 866 7.0E-12 T 12-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain M892_23675 55e0de7f482497be95f24cb25c6da198 887 Gene3D G3DSA:1.10.10.1100 817 872 1.1E-13 T 12-10-2018 M892_23675 55e0de7f482497be95f24cb25c6da198 887 Gene3D G3DSA:2.40.40.20 578 703 4.8E-22 T 12-10-2018 M892_23675 55e0de7f482497be95f24cb25c6da198 887 Pfam PF01568 Molydopterin dinucleotide binding domain 580 690 1.4E-17 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 M892_23675 55e0de7f482497be95f24cb25c6da198 887 SUPERFAMILY SSF53706 6 566 1.44E-164 T 12-10-2018 M892_23675 55e0de7f482497be95f24cb25c6da198 887 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 7 51 1.8E-10 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M892_23675 55e0de7f482497be95f24cb25c6da198 887 SUPERFAMILY SSF50692 554 695 2.26E-22 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily M892_23675 55e0de7f482497be95f24cb25c6da198 887 Pfam PF00384 Molybdopterin oxidoreductase 55 482 6.7E-78 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M892_08295 a2bff31d33168d9eb7fd27c9300e7254 275 Hamap MF_01000 Vitamin B12-binding protein [btuF]. 2 272 49.529 T 12-10-2018 IPR023544 ABC transporter, vitamin B12-binding protein GO:0015889|GO:0031419|GO:0042597 M892_08295 a2bff31d33168d9eb7fd27c9300e7254 275 SUPERFAMILY SSF53807 21 267 3.02E-56 T 12-10-2018 M892_08295 a2bff31d33168d9eb7fd27c9300e7254 275 Gene3D G3DSA:3.40.50.1980 143 271 1.1E-27 T 12-10-2018 M892_08295 a2bff31d33168d9eb7fd27c9300e7254 275 Pfam PF01497 Periplasmic binding protein 26 247 1.2E-31 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain M892_08295 a2bff31d33168d9eb7fd27c9300e7254 275 Gene3D G3DSA:3.40.50.1980 22 141 7.2E-35 T 12-10-2018 M892_23820 15c608e2730102e29e0f11fb12b9afaf 249 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 12-10-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 M892_23820 15c608e2730102e29e0f11fb12b9afaf 249 SMART SM00893 23 211 1.1E-61 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 M892_23820 15c608e2730102e29e0f11fb12b9afaf 249 PIRSF PIRSF000090 1 249 7.7E-79 T 12-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 M892_23820 15c608e2730102e29e0f11fb12b9afaf 249 Pfam PF01012 Electron transfer flavoprotein domain 26 204 5.9E-44 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 M892_23820 15c608e2730102e29e0f11fb12b9afaf 249 SUPERFAMILY SSF52402 2 242 2.37E-79 T 12-10-2018 M892_23820 15c608e2730102e29e0f11fb12b9afaf 249 Gene3D G3DSA:3.40.50.620 1 247 4.2E-80 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M892_25055 cb1a76285974240e4db63c956604849a 304 Gene3D G3DSA:2.40.50.180 31 146 1.0E-24 T 12-10-2018 M892_25055 cb1a76285974240e4db63c956604849a 304 SMART SM00260 11 147 9.4E-21 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 M892_25055 cb1a76285974240e4db63c956604849a 304 SUPERFAMILY SSF50341 11 152 6.54E-30 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 M892_25055 cb1a76285974240e4db63c956604849a 304 SUPERFAMILY SSF52172 171 292 3.27E-21 T 12-10-2018 IPR011006 CheY-like superfamily M892_25055 cb1a76285974240e4db63c956604849a 304 Pfam PF01584 CheW-like domain 14 149 1.1E-30 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 M892_25055 cb1a76285974240e4db63c956604849a 304 PIRSF PIRSF002867 1 298 1.9E-89 T 12-10-2018 IPR024181 Chemotaxis response regulator CheV M892_25055 cb1a76285974240e4db63c956604849a 304 Gene3D G3DSA:2.30.30.40 17 141 1.0E-24 T 12-10-2018 M892_25055 cb1a76285974240e4db63c956604849a 304 Pfam PF00072 Response regulator receiver domain 175 289 1.6E-14 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_25055 cb1a76285974240e4db63c956604849a 304 Gene3D G3DSA:3.40.50.2300 162 299 1.8E-22 T 12-10-2018 M892_25055 cb1a76285974240e4db63c956604849a 304 SMART SM00448 173 290 4.6E-15 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_13720 5dd30b51cbc01ae3aa77377770055929 246 Gene3D G3DSA:2.60.440.10 6 245 1.6E-88 T 12-10-2018 IPR027462 Z ring-associated protein D, C-terminal M892_13720 5dd30b51cbc01ae3aa77377770055929 246 Gene3D G3DSA:1.10.3900.10 12 178 1.6E-88 T 12-10-2018 M892_13720 5dd30b51cbc01ae3aa77377770055929 246 SUPERFAMILY SSF160950 1 245 2.09E-94 T 12-10-2018 IPR036268 ZapD domain superfamily M892_13720 5dd30b51cbc01ae3aa77377770055929 246 Hamap MF_01092 Cell division protein ZapD [zapD]. 3 245 32.812 T 12-10-2018 IPR009777 Cell division protein ZapD M892_13720 5dd30b51cbc01ae3aa77377770055929 246 Pfam PF07072 Cell division protein 18 224 6.4E-76 T 12-10-2018 IPR009777 Cell division protein ZapD M892_11125 d05d5a614d79201680b3f280b6397ecb 842 Pfam PF12633 Adenylate cyclase NT domain 5 198 2.9E-77 T 12-10-2018 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 M892_11125 d05d5a614d79201680b3f280b6397ecb 842 Pfam PF01295 Adenylate cyclase, class-I 226 828 7.6E-254 T 12-10-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 M892_11125 d05d5a614d79201680b3f280b6397ecb 842 PIRSF PIRSF001444 1 842 0.0 T 12-10-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 M892_09015 79c491a8d0ed7c46001ec9cbd96f1b55 301 Pfam PF10987 Protein of unknown function (DUF2806) 61 279 1.4E-86 T 12-10-2018 IPR021254 Protein of unknown function DUF2806 M892_09015 79c491a8d0ed7c46001ec9cbd96f1b55 301 TIGRFAM TIGR03899 TIGR03899: TIGR03899 family protein 40 289 5.5E-110 T 12-10-2018 IPR021254 Protein of unknown function DUF2806 M892_11950 5120529f68c8d35e3d695c810b95b156 252 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 9 111 1.6E-32 T 12-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 M892_11950 5120529f68c8d35e3d695c810b95b156 252 SUPERFAMILY SSF46548 107 226 1.73E-30 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 M892_11950 5120529f68c8d35e3d695c810b95b156 252 Gene3D G3DSA:3.10.20.30 4 106 5.1E-35 T 12-10-2018 IPR012675 Beta-grasp domain superfamily M892_11950 5120529f68c8d35e3d695c810b95b156 252 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M892_11950 5120529f68c8d35e3d695c810b95b156 252 Gene3D G3DSA:1.10.1060.10 107 244 4.1E-50 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 M892_11950 5120529f68c8d35e3d695c810b95b156 252 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 11 229 9.8E-95 T 12-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 M892_11950 5120529f68c8d35e3d695c810b95b156 252 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 58 66 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 M892_11950 5120529f68c8d35e3d695c810b95b156 252 SUPERFAMILY SSF54292 5 106 3.37E-29 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 M892_11950 5120529f68c8d35e3d695c810b95b156 252 Pfam PF13183 4Fe-4S dicluster domain 147 219 8.0E-11 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M892_14365 b9ca54b5db81b604f1fac4fdbc536464 232 SMART SM00028 123 156 84.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_14365 b9ca54b5db81b604f1fac4fdbc536464 232 SMART SM00028 89 122 60.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_14365 b9ca54b5db81b604f1fac4fdbc536464 232 SMART SM00028 157 190 82.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_14365 b9ca54b5db81b604f1fac4fdbc536464 232 SMART SM00028 55 88 120.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_14365 b9ca54b5db81b604f1fac4fdbc536464 232 Gene3D G3DSA:1.25.40.10 18 222 3.9E-28 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_14365 b9ca54b5db81b604f1fac4fdbc536464 232 SUPERFAMILY SSF48452 52 215 4.43E-22 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_14365 b9ca54b5db81b604f1fac4fdbc536464 232 Pfam PF14559 Tetratricopeptide repeat 168 215 1.1E-7 T 12-10-2018 M892_14365 b9ca54b5db81b604f1fac4fdbc536464 232 Pfam PF13181 Tetratricopeptide repeat 56 80 0.04 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_19585 3c81779cdb417d0e1d4eed40a69e308f 282 Gene3D G3DSA:1.25.40.10 97 264 4.5E-16 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_19585 3c81779cdb417d0e1d4eed40a69e308f 282 SUPERFAMILY SSF48452 172 256 8.22E-16 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_19585 3c81779cdb417d0e1d4eed40a69e308f 282 SMART SM00028 186 219 3.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_19585 3c81779cdb417d0e1d4eed40a69e308f 282 SMART SM00028 220 253 0.021 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_09980 42bd5dd67ecfdcb57f7c4555b84b9a0e 249 ProSitePatterns PS01218 TatC family signature. 155 174 - T 12-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site M892_09980 42bd5dd67ecfdcb57f7c4555b84b9a0e 249 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 5 239 15.927 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 M892_09980 42bd5dd67ecfdcb57f7c4555b84b9a0e 249 Pfam PF00902 Sec-independent protein translocase protein (TatC) 13 222 3.9E-66 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 M892_09980 42bd5dd67ecfdcb57f7c4555b84b9a0e 249 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 10 227 9.5E-76 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 M892_09980 42bd5dd67ecfdcb57f7c4555b84b9a0e 249 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 9 36 1.5E-51 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 M892_09980 42bd5dd67ecfdcb57f7c4555b84b9a0e 249 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 86 104 1.5E-51 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 M892_09980 42bd5dd67ecfdcb57f7c4555b84b9a0e 249 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 104 130 1.5E-51 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 M892_09980 42bd5dd67ecfdcb57f7c4555b84b9a0e 249 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 155 183 1.5E-51 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 M892_14395 467d8bfd4043c03b1746a5902770c8fb 313 Gene3D G3DSA:1.10.10.10 12 99 9.4E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_14395 467d8bfd4043c03b1746a5902770c8fb 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 20 78 5.3E-14 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_14395 467d8bfd4043c03b1746a5902770c8fb 313 SUPERFAMILY SSF53850 102 309 2.17E-34 T 12-10-2018 M892_14395 467d8bfd4043c03b1746a5902770c8fb 313 Pfam PF03466 LysR substrate binding domain 108 307 4.9E-23 T 12-10-2018 IPR005119 LysR, substrate-binding M892_14395 467d8bfd4043c03b1746a5902770c8fb 313 SUPERFAMILY SSF46785 15 93 2.58E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_14395 467d8bfd4043c03b1746a5902770c8fb 313 Gene3D G3DSA:3.40.190.10 183 281 5.4E-43 T 12-10-2018 M892_14395 467d8bfd4043c03b1746a5902770c8fb 313 Gene3D G3DSA:3.40.190.10 109 305 5.4E-43 T 12-10-2018 M892_11990 7699aebe57e1b30a9b426969465858d0 345 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 192 329 1.5E-52 T 12-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 M892_11990 7699aebe57e1b30a9b426969465858d0 345 PIRSF PIRSF000114 10 344 3.1E-95 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 M892_11990 7699aebe57e1b30a9b426969465858d0 345 Gene3D G3DSA:1.10.1040.10 201 345 8.2E-54 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 M892_11990 7699aebe57e1b30a9b426969465858d0 345 SUPERFAMILY SSF48179 191 343 2.27E-56 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 M892_11990 7699aebe57e1b30a9b426969465858d0 345 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 14 334 37.038 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 M892_11990 7699aebe57e1b30a9b426969465858d0 345 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 16 170 4.9E-45 T 12-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 M892_11990 7699aebe57e1b30a9b426969465858d0 345 SUPERFAMILY SSF51735 16 190 4.93E-49 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_11990 7699aebe57e1b30a9b426969465858d0 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 68 95 7.3E-43 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 M892_11990 7699aebe57e1b30a9b426969465858d0 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 18 35 7.3E-43 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 M892_11990 7699aebe57e1b30a9b426969465858d0 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 250 267 7.3E-43 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 M892_11990 7699aebe57e1b30a9b426969465858d0 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 144 164 7.3E-43 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 M892_11990 7699aebe57e1b30a9b426969465858d0 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 185 209 7.3E-43 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 M892_11990 7699aebe57e1b30a9b426969465858d0 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 210 234 7.3E-43 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 M892_11990 7699aebe57e1b30a9b426969465858d0 345 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 200 221 - T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 M892_11990 7699aebe57e1b30a9b426969465858d0 345 Gene3D G3DSA:3.40.50.720 2 199 6.3E-51 T 12-10-2018 M892_28420 492355458ae44baadde4be1ed2ad6a6a 98 Pfam PF12840 Helix-turn-helix domain 11 72 1.8E-8 T 12-10-2018 M892_28420 492355458ae44baadde4be1ed2ad6a6a 98 Gene3D G3DSA:1.10.10.10 1 93 4.6E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_28420 492355458ae44baadde4be1ed2ad6a6a 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 13 28 1.6E-8 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M892_28420 492355458ae44baadde4be1ed2ad6a6a 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 48 63 1.6E-8 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M892_28420 492355458ae44baadde4be1ed2ad6a6a 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 63 78 1.6E-8 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M892_28420 492355458ae44baadde4be1ed2ad6a6a 98 SMART SM00418 11 92 3.9E-8 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M892_28420 492355458ae44baadde4be1ed2ad6a6a 98 SUPERFAMILY SSF46785 7 95 7.69E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_20895 c02b597855c53b5a5da42c38fa77627c 302 SUPERFAMILY SSF51430 6 293 1.27E-69 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily M892_20895 c02b597855c53b5a5da42c38fa77627c 302 Pfam PF00248 Aldo/keto reductase family 17 291 3.3E-59 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain M892_20895 c02b597855c53b5a5da42c38fa77627c 302 Gene3D G3DSA:3.20.20.100 1 302 4.9E-99 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily M892_28645 714e9a8c50d259b2975125478caaa709 358 Gene3D G3DSA:1.10.10.10 10 124 4.2E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_28645 714e9a8c50d259b2975125478caaa709 358 SUPERFAMILY SSF46785 21 137 5.99E-14 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_28645 714e9a8c50d259b2975125478caaa709 358 Gene3D G3DSA:1.10.10.10 154 265 6.1E-9 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_28645 714e9a8c50d259b2975125478caaa709 358 SUPERFAMILY SSF46785 139 260 1.17E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_28645 714e9a8c50d259b2975125478caaa709 358 Pfam PF01051 Initiator Replication protein 17 258 8.2E-36 T 12-10-2018 IPR000525 Initiator Rep protein GO:0003887|GO:0005727|GO:0006270 M892_18160 9675841c082fffbd64024169ea2e7842 896 Pfam PF01204 Trehalase 686 878 9.1E-9 T 12-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 M892_18160 9675841c082fffbd64024169ea2e7842 896 SUPERFAMILY SSF48208 247 891 1.79E-77 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 M892_18160 9675841c082fffbd64024169ea2e7842 896 Gene3D G3DSA:1.50.10.10 608 895 2.2E-65 T 12-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 M892_18160 9675841c082fffbd64024169ea2e7842 896 Gene3D G3DSA:1.50.10.10 318 605 8.5E-52 T 12-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 M892_18160 9675841c082fffbd64024169ea2e7842 896 Gene3D G3DSA:1.10.287.100 280 317 1.3E-8 T 12-10-2018 M892_18160 9675841c082fffbd64024169ea2e7842 896 Gene3D G3DSA:2.70.98.50 35 278 3.1E-72 T 12-10-2018 M892_16350 57d8e443458524b6d8f6dd47abd95d18 201 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 32 201 9.3E-57 T 12-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 M892_16350 57d8e443458524b6d8f6dd47abd95d18 201 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 29 201 2.3E-67 T 12-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 M892_16350 57d8e443458524b6d8f6dd47abd95d18 201 SUPERFAMILY SSF52540 12 201 1.29E-69 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_16350 57d8e443458524b6d8f6dd47abd95d18 201 Gene3D G3DSA:3.40.50.300 11 201 1.2E-68 T 12-10-2018 M892_16350 57d8e443458524b6d8f6dd47abd95d18 201 PIRSF PIRSF015617 6 201 3.5E-64 T 12-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 M892_16350 57d8e443458524b6d8f6dd47abd95d18 201 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 5 26 5.9E-7 T 12-10-2018 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17 M892_20845 9b6481cadd86387e83b985296308d29e 378 Pfam PF04443 Acyl-protein synthetase, LuxE 6 371 9.3E-130 T 12-10-2018 IPR007534 Acyl-protein synthetase, LuxE GO:0008218|GO:0047474 MetaCyc: PWY-7723 M892_20845 9b6481cadd86387e83b985296308d29e 378 Gene3D G3DSA:3.40.50.12780 18 324 8.2E-13 T 12-10-2018 M892_20845 9b6481cadd86387e83b985296308d29e 378 PIRSF PIRSF016580 7 374 1.5E-162 T 12-10-2018 IPR016671 Acyl-protein synthetase, LuxE, bacterial GO:0008218|GO:0047474 MetaCyc: PWY-7723 M892_13915 d2964125ea8f0689231dddd9c3db981f 337 Gene3D G3DSA:3.40.190.10 25 297 8.1E-126 T 12-10-2018 M892_13915 d2964125ea8f0689231dddd9c3db981f 337 Pfam PF13343 Bacterial extracellular solute-binding protein 72 295 4.2E-18 T 12-10-2018 M892_13915 d2964125ea8f0689231dddd9c3db981f 337 PIRSF PIRSF002825 1 337 2.2E-101 T 12-10-2018 IPR026045 Ferric binding protein M892_13915 d2964125ea8f0689231dddd9c3db981f 337 Gene3D G3DSA:3.40.190.10 120 328 8.1E-126 T 12-10-2018 M892_13915 d2964125ea8f0689231dddd9c3db981f 337 SUPERFAMILY SSF53850 24 332 2.63E-75 T 12-10-2018 M892_19160 5b0c78b0c53aded3281bbca8c05991c6 326 Gene3D G3DSA:3.40.250.10 97 253 4.2E-52 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily M892_19160 5b0c78b0c53aded3281bbca8c05991c6 326 SMART SM00450 113 214 1.0E-22 T 12-10-2018 IPR001763 Rhodanese-like domain M892_19160 5b0c78b0c53aded3281bbca8c05991c6 326 Hamap MF_00469 UPF0176 protein YceA [yceA]. 2 254 45.69 T 12-10-2018 IPR020936 Uncharacterised protein family UPF0176 M892_19160 5b0c78b0c53aded3281bbca8c05991c6 326 Gene3D G3DSA:3.30.70.100 1 96 3.6E-34 T 12-10-2018 M892_19160 5b0c78b0c53aded3281bbca8c05991c6 326 Pfam PF00581 Rhodanese-like domain 117 210 3.8E-8 T 12-10-2018 IPR001763 Rhodanese-like domain M892_19160 5b0c78b0c53aded3281bbca8c05991c6 326 SUPERFAMILY SSF52821 94 240 1.51E-32 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily M892_06095 844103270dfa12f2da2e54948fd1fada 399 Pfam PF07670 Nucleoside recognition 87 182 4.3E-7 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 M892_06095 844103270dfa12f2da2e54948fd1fada 399 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 5 78 1.0E-25 T 12-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 M892_06095 844103270dfa12f2da2e54948fd1fada 399 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 189 396 1.3E-70 T 12-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 M892_06095 844103270dfa12f2da2e54948fd1fada 399 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 1 395 8.9E-135 T 12-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 M892_08010 ceba4075f3c52bf759181aca789bc233 311 Gene3D G3DSA:2.40.30.30 188 311 5.3E-40 T 12-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 M892_08010 ceba4075f3c52bf759181aca789bc233 311 PIRSF PIRSF004491 1 311 5.5E-107 T 12-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 M892_08010 ceba4075f3c52bf759181aca789bc233 311 SMART SM00904 183 307 3.2E-63 T 12-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 M892_08010 ceba4075f3c52bf759181aca789bc233 311 Gene3D G3DSA:3.40.50.620 1 187 4.6E-62 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M892_08010 ceba4075f3c52bf759181aca789bc233 311 SUPERFAMILY SSF52374 15 175 3.1E-36 T 12-10-2018 M892_08010 ceba4075f3c52bf759181aca789bc233 311 Pfam PF06574 FAD synthetase 12 167 1.8E-59 T 12-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 M892_08010 ceba4075f3c52bf759181aca789bc233 311 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 18 54 6.5E-8 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 M892_08010 ceba4075f3c52bf759181aca789bc233 311 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 307 1.3E-107 T 12-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 M892_08010 ceba4075f3c52bf759181aca789bc233 311 SUPERFAMILY SSF82114 174 309 5.45E-45 T 12-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 M892_08010 ceba4075f3c52bf759181aca789bc233 311 Pfam PF01687 Riboflavin kinase 184 306 1.5E-38 T 12-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 M892_22215 865bc3a6994a83c7af33f99e176cd54e 585 PRINTS PR01607 Apyrase family signature 280 300 6.3E-12 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M892_22215 865bc3a6994a83c7af33f99e176cd54e 585 PRINTS PR01607 Apyrase family signature 240 263 6.3E-12 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M892_22215 865bc3a6994a83c7af33f99e176cd54e 585 PRINTS PR01607 Apyrase family signature 15 33 6.3E-12 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M892_22215 865bc3a6994a83c7af33f99e176cd54e 585 PRINTS PR01607 Apyrase family signature 221 238 6.3E-12 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M892_22215 865bc3a6994a83c7af33f99e176cd54e 585 Pfam PF00149 Calcineurin-like phosphoesterase 18 257 2.5E-9 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 M892_22215 865bc3a6994a83c7af33f99e176cd54e 585 Pfam PF02872 5'-nucleotidase, C-terminal domain 378 544 8.5E-21 T 12-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M892_22215 865bc3a6994a83c7af33f99e176cd54e 585 Gene3D G3DSA:3.60.21.10 6 374 9.1E-88 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like M892_22215 865bc3a6994a83c7af33f99e176cd54e 585 Gene3D G3DSA:3.90.780.10 375 580 2.4E-32 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M892_22215 865bc3a6994a83c7af33f99e176cd54e 585 SUPERFAMILY SSF56300 16 331 8.04E-73 T 12-10-2018 M892_22215 865bc3a6994a83c7af33f99e176cd54e 585 SUPERFAMILY SSF55816 374 569 1.05E-36 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M892_12530 71dafd507f76ee02a57c05e5ad33d3a4 254 Pfam PF04338 Protein of unknown function, DUF481 39 254 1.0E-50 T 12-10-2018 IPR007433 Protein of unknown function DUF481 M892_12530 71dafd507f76ee02a57c05e5ad33d3a4 254 SUPERFAMILY SSF56935 42 205 7.12E-5 T 12-10-2018 M892_22020 fcae177face512300d42d25671d2214e 324 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 9 312 8.2E-104 T 12-10-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 M892_22020 fcae177face512300d42d25671d2214e 324 Gene3D G3DSA:3.40.1190.20 6 315 1.8E-96 T 12-10-2018 IPR029056 Ribokinase-like M892_22020 fcae177face512300d42d25671d2214e 324 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 9 312 1.3E-103 T 12-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 M892_22020 fcae177face512300d42d25671d2214e 324 Pfam PF00294 pfkB family carbohydrate kinase 25 298 1.5E-53 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB M892_22020 fcae177face512300d42d25671d2214e 324 PIRSF PIRSF000535 6 315 2.9E-98 T 12-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 M892_22020 fcae177face512300d42d25671d2214e 324 SUPERFAMILY SSF53613 10 297 6.24E-70 T 12-10-2018 IPR029056 Ribokinase-like M892_22020 fcae177face512300d42d25671d2214e 324 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 43 67 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 M892_27285 3b5c45c63f6511ea73ee72e73f05baed 160 SMART SM00344 11 120 1.2E-34 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 M892_27285 3b5c45c63f6511ea73ee72e73f05baed 160 Pfam PF01037 Lrp/AsnC ligand binding domain 79 149 4.9E-12 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain M892_27285 3b5c45c63f6511ea73ee72e73f05baed 160 Gene3D G3DSA:3.30.70.920 63 155 8.9E-19 T 12-10-2018 M892_27285 3b5c45c63f6511ea73ee72e73f05baed 160 SUPERFAMILY SSF54909 71 159 5.09E-16 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel M892_27285 3b5c45c63f6511ea73ee72e73f05baed 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 38 57 2.5E-13 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 M892_27285 3b5c45c63f6511ea73ee72e73f05baed 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 11 27 2.5E-13 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 M892_27285 3b5c45c63f6511ea73ee72e73f05baed 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 27 38 2.5E-13 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 M892_27285 3b5c45c63f6511ea73ee72e73f05baed 160 SUPERFAMILY SSF46785 10 71 5.27E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_27285 3b5c45c63f6511ea73ee72e73f05baed 160 Pfam PF13412 Winged helix-turn-helix DNA-binding 11 58 3.8E-18 T 12-10-2018 M892_27285 3b5c45c63f6511ea73ee72e73f05baed 160 Gene3D G3DSA:1.10.10.10 1 62 5.3E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_06660 0897b716877f3218145e9b3f0b648c54 198 Hamap MF_00789 UPF0319 protein YccT [yccT]. 4 195 23.763 T 12-10-2018 IPR018635 Uncharacterised protein family UPF0319 M892_06660 0897b716877f3218145e9b3f0b648c54 198 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 23 192 1.5E-31 T 12-10-2018 IPR018635 Uncharacterised protein family UPF0319 M892_11775 31880c99e7cc8c0542482cc171392126 608 SUPERFAMILY SSF54631 144 276 7.07E-17 T 12-10-2018 M892_11775 31880c99e7cc8c0542482cc171392126 608 Pfam PF03445 Putative nucleotidyltransferase DUF294 302 433 1.7E-41 T 12-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 M892_11775 31880c99e7cc8c0542482cc171392126 608 SUPERFAMILY SSF51206 8 130 8.77E-16 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like M892_11775 31880c99e7cc8c0542482cc171392126 608 Gene3D G3DSA:3.10.580.10 141 288 4.8E-18 T 12-10-2018 M892_11775 31880c99e7cc8c0542482cc171392126 608 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 472 604 7.6E-40 T 12-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding M892_11775 31880c99e7cc8c0542482cc171392126 608 Gene3D G3DSA:2.60.120.10 5 140 7.9E-11 T 12-10-2018 IPR014710 RmlC-like jelly roll fold M892_11775 31880c99e7cc8c0542482cc171392126 608 Pfam PF00027 Cyclic nucleotide-binding domain 31 113 1.0E-7 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain M892_10325 e77510800572c4d21a5c059b3fd80245 571 SUPERFAMILY SSF52540 3 253 1.25E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_10325 e77510800572c4d21a5c059b3fd80245 571 Pfam PF00005 ABC transporter 24 181 1.2E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_10325 e77510800572c4d21a5c059b3fd80245 571 Gene3D G3DSA:3.40.50.300 1 293 1.4E-86 T 12-10-2018 M892_10325 e77510800572c4d21a5c059b3fd80245 571 Gene3D G3DSA:3.40.50.300 301 571 3.0E-85 T 12-10-2018 M892_10325 e77510800572c4d21a5c059b3fd80245 571 SMART SM00382 32 231 6.8E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_10325 e77510800572c4d21a5c059b3fd80245 571 SMART SM00382 338 534 4.4E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_10325 e77510800572c4d21a5c059b3fd80245 571 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_10325 e77510800572c4d21a5c059b3fd80245 571 SUPERFAMILY SSF52540 304 553 6.5E-72 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_10325 e77510800572c4d21a5c059b3fd80245 571 Pfam PF00005 ABC transporter 330 483 5.2E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_10325 e77510800572c4d21a5c059b3fd80245 571 ProSitePatterns PS00211 ABC transporters family signature. 455 469 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_10325 e77510800572c4d21a5c059b3fd80245 571 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 534 566 8.3E-4 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 M892_10325 e77510800572c4d21a5c059b3fd80245 571 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 281 3.0E-7 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 M892_26215 15d6aa2cfe956d58037575659ed8f3b2 256 SMART SM00448 23 134 1.8E-38 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_26215 15d6aa2cfe956d58037575659ed8f3b2 256 Pfam PF00486 Transcriptional regulatory protein, C terminal 177 252 1.5E-23 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M892_26215 15d6aa2cfe956d58037575659ed8f3b2 256 SMART SM00862 176 252 4.5E-21 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M892_26215 15d6aa2cfe956d58037575659ed8f3b2 256 Gene3D G3DSA:1.10.10.10 143 256 1.4E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_26215 15d6aa2cfe956d58037575659ed8f3b2 256 SUPERFAMILY SSF46894 155 253 1.59E-26 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M892_26215 15d6aa2cfe956d58037575659ed8f3b2 256 Gene3D G3DSA:3.40.50.2300 9 142 7.7E-36 T 12-10-2018 M892_26215 15d6aa2cfe956d58037575659ed8f3b2 256 SUPERFAMILY SSF52172 24 149 5.12E-38 T 12-10-2018 IPR011006 CheY-like superfamily M892_26215 15d6aa2cfe956d58037575659ed8f3b2 256 Pfam PF00072 Response regulator receiver domain 25 134 1.1E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_20855 b46b7fdc81595d1a6daa3a3dddefd49c 230 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 12 214 40.536 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 M892_20855 b46b7fdc81595d1a6daa3a3dddefd49c 230 SUPERFAMILY SSF55821 8 211 8.01E-81 T 12-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily M892_20855 b46b7fdc81595d1a6daa3a3dddefd49c 230 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 14 210 6.1E-74 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 M892_20855 b46b7fdc81595d1a6daa3a3dddefd49c 230 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 18 209 1.0E-77 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 M892_20855 b46b7fdc81595d1a6daa3a3dddefd49c 230 Gene3D G3DSA:3.90.870.10 1 214 2.1E-84 T 12-10-2018 M892_08715 a3514253f60cb410fb0fb8662e68fbfe 382 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 151 374 4.2E-59 T 12-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 M892_08715 a3514253f60cb410fb0fb8662e68fbfe 382 SUPERFAMILY SSF51735 3 203 3.41E-42 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_08715 a3514253f60cb410fb0fb8662e68fbfe 382 Gene3D G3DSA:3.40.50.720 2 206 4.2E-79 T 12-10-2018 M892_08715 a3514253f60cb410fb0fb8662e68fbfe 382 Gene3D G3DSA:1.10.1040.10 208 382 7.9E-65 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 M892_08715 a3514253f60cb410fb0fb8662e68fbfe 382 Hamap MF_00196 Mannitol-1-phosphate 5-dehydrogenase [mtlD]. 2 379 40.973 T 12-10-2018 IPR023028 Mannitol-1-phosphate 5-dehydrogenase GO:0008926|GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 M892_08715 a3514253f60cb410fb0fb8662e68fbfe 382 SUPERFAMILY SSF48179 205 382 1.53E-45 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 M892_08715 a3514253f60cb410fb0fb8662e68fbfe 382 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 3 124 2.0E-23 T 12-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 M892_08715 a3514253f60cb410fb0fb8662e68fbfe 382 PRINTS PR00084 Mannitol dehydrogenase signature 115 128 7.7E-18 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 M892_08715 a3514253f60cb410fb0fb8662e68fbfe 382 PRINTS PR00084 Mannitol dehydrogenase signature 151 164 7.7E-18 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 M892_08715 a3514253f60cb410fb0fb8662e68fbfe 382 PRINTS PR00084 Mannitol dehydrogenase signature 4 14 7.7E-18 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 M892_08715 a3514253f60cb410fb0fb8662e68fbfe 382 PRINTS PR00084 Mannitol dehydrogenase signature 171 186 7.7E-18 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 M892_08715 a3514253f60cb410fb0fb8662e68fbfe 382 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 151 163 - T 12-10-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 M892_20840 367cccb428062f6bb26fc72e75890462 324 Pfam PF00296 Luciferase-like monooxygenase 1 254 3.0E-33 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 M892_20840 367cccb428062f6bb26fc72e75890462 324 ProSitePatterns PS00494 Bacterial luciferase subunits signature. 187 212 - T 12-10-2018 IPR018235 Bacterial luciferase, conserved site GO:0047646|GO:0055114 MetaCyc: PWY-7723 M892_20840 367cccb428062f6bb26fc72e75890462 324 PRINTS PR00089 Bacterial luciferase signature 181 196 1.4E-22 T 12-10-2018 IPR002103 Bacterial luciferase/NFP MetaCyc: PWY-7723 M892_20840 367cccb428062f6bb26fc72e75890462 324 PRINTS PR00089 Bacterial luciferase signature 232 250 1.4E-22 T 12-10-2018 IPR002103 Bacterial luciferase/NFP MetaCyc: PWY-7723 M892_20840 367cccb428062f6bb26fc72e75890462 324 PRINTS PR00089 Bacterial luciferase signature 214 231 1.4E-22 T 12-10-2018 IPR002103 Bacterial luciferase/NFP MetaCyc: PWY-7723 M892_20840 367cccb428062f6bb26fc72e75890462 324 PRINTS PR00089 Bacterial luciferase signature 167 178 1.4E-22 T 12-10-2018 IPR002103 Bacterial luciferase/NFP MetaCyc: PWY-7723 M892_20840 367cccb428062f6bb26fc72e75890462 324 PRINTS PR00089 Bacterial luciferase signature 197 212 1.4E-22 T 12-10-2018 IPR002103 Bacterial luciferase/NFP MetaCyc: PWY-7723 M892_20840 367cccb428062f6bb26fc72e75890462 324 Gene3D G3DSA:3.20.20.30 1 324 2.5E-121 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 M892_20840 367cccb428062f6bb26fc72e75890462 324 SUPERFAMILY SSF51679 98 323 1.3E-68 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 M892_10525 b7d9c787ed6aefe71031196f099291a5 805 ProSitePatterns PS00177 DNA topoisomerase II signature. 423 431 - T 12-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 M892_10525 b7d9c787ed6aefe71031196f099291a5 805 Pfam PF00204 DNA gyrase B 221 391 3.2E-60 T 12-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 M892_10525 b7d9c787ed6aefe71031196f099291a5 805 PRINTS PR01159 DNA gyrase subunit B signature 243 261 1.3E-85 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 M892_10525 b7d9c787ed6aefe71031196f099291a5 805 PRINTS PR01159 DNA gyrase subunit B signature 313 329 1.3E-85 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 M892_10525 b7d9c787ed6aefe71031196f099291a5 805 PRINTS PR01159 DNA gyrase subunit B signature 220 242 1.3E-85 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 M892_10525 b7d9c787ed6aefe71031196f099291a5 805 PRINTS PR01159 DNA gyrase subunit B signature 5 15 1.3E-85 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 M892_10525 b7d9c787ed6aefe71031196f099291a5 805 PRINTS PR01159 DNA gyrase subunit B signature 180 195 1.3E-85 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 M892_10525 b7d9c787ed6aefe71031196f099291a5 805 PRINTS PR01159 DNA gyrase subunit B signature 471 480 1.3E-85 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 M892_10525 b7d9c787ed6aefe71031196f099291a5 805 PRINTS PR01159 DNA gyrase subunit B signature 758 770 1.3E-85 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 M892_10525 b7d9c787ed6aefe71031196f099291a5 805 PRINTS PR01159 DNA gyrase subunit B signature 195 208 1.3E-85 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 M892_10525 b7d9c787ed6aefe71031196f099291a5 805 PRINTS PR01159 DNA gyrase subunit B signature 774 790 1.3E-85 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 M892_10525 b7d9c787ed6aefe71031196f099291a5 805 PRINTS PR01159 DNA gyrase subunit B signature 375 395 1.3E-85 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 M892_10525 b7d9c787ed6aefe71031196f099291a5 805 PRINTS PR01159 DNA gyrase subunit B signature 361 375 1.3E-85 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 M892_10525 b7d9c787ed6aefe71031196f099291a5 805 SUPERFAMILY SSF54211 221 393 5.69E-59 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold M892_10525 b7d9c787ed6aefe71031196f099291a5 805 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 734 794 2.6E-30 T 12-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 M892_10525 b7d9c787ed6aefe71031196f099291a5 805 SUPERFAMILY SSF56719 395 796 6.8E-88 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 M892_10525 b7d9c787ed6aefe71031196f099291a5 805 Gene3D G3DSA:3.30.565.10 1 220 1.1E-94 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_10525 b7d9c787ed6aefe71031196f099291a5 805 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 173 1.5E-22 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_10525 b7d9c787ed6aefe71031196f099291a5 805 SMART SM00433 35 798 3.3E-273 T 12-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 M892_10525 b7d9c787ed6aefe71031196f099291a5 805 Pfam PF01751 Toprim domain 420 532 8.5E-19 T 12-10-2018 IPR006171 TOPRIM domain M892_10525 b7d9c787ed6aefe71031196f099291a5 805 PRINTS PR00418 DNA topoisomerase II family signature 70 83 6.9E-71 T 12-10-2018 M892_10525 b7d9c787ed6aefe71031196f099291a5 805 PRINTS PR00418 DNA topoisomerase II family signature 526 538 6.9E-71 T 12-10-2018 M892_10525 b7d9c787ed6aefe71031196f099291a5 805 PRINTS PR00418 DNA topoisomerase II family signature 269 282 6.9E-71 T 12-10-2018 M892_10525 b7d9c787ed6aefe71031196f099291a5 805 PRINTS PR00418 DNA topoisomerase II family signature 35 50 6.9E-71 T 12-10-2018 M892_10525 b7d9c787ed6aefe71031196f099291a5 805 PRINTS PR00418 DNA topoisomerase II family signature 113 127 6.9E-71 T 12-10-2018 M892_10525 b7d9c787ed6aefe71031196f099291a5 805 PRINTS PR00418 DNA topoisomerase II family signature 737 753 6.9E-71 T 12-10-2018 M892_10525 b7d9c787ed6aefe71031196f099291a5 805 PRINTS PR00418 DNA topoisomerase II family signature 488 504 6.9E-71 T 12-10-2018 M892_10525 b7d9c787ed6aefe71031196f099291a5 805 PRINTS PR00418 DNA topoisomerase II family signature 506 523 6.9E-71 T 12-10-2018 M892_10525 b7d9c787ed6aefe71031196f099291a5 805 PRINTS PR00418 DNA topoisomerase II family signature 421 435 6.9E-71 T 12-10-2018 M892_10525 b7d9c787ed6aefe71031196f099291a5 805 Gene3D G3DSA:3.40.50.670 399 573 3.4E-75 T 12-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 M892_10525 b7d9c787ed6aefe71031196f099291a5 805 Gene3D G3DSA:3.40.50.670 706 804 2.5E-27 T 12-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 M892_10525 b7d9c787ed6aefe71031196f099291a5 805 SUPERFAMILY SSF55874 4 211 8.25E-76 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_10525 b7d9c787ed6aefe71031196f099291a5 805 Gene3D G3DSA:3.10.20.690 593 684 3.4E-35 T 12-10-2018 M892_10525 b7d9c787ed6aefe71031196f099291a5 805 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 2 805 108.65 T 12-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 M892_10525 b7d9c787ed6aefe71031196f099291a5 805 SMART SM00387 31 175 5.0E-29 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_10525 b7d9c787ed6aefe71031196f099291a5 805 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 5 805 0.0 T 12-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 M892_10525 b7d9c787ed6aefe71031196f099291a5 805 Gene3D G3DSA:3.30.230.10 221 393 1.2E-72 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M892_07635 195b1eace60ab6b2b3be02baae92c27c 404 Pfam PF00266 Aminotransferase class-V 5 368 6.7E-90 T 12-10-2018 IPR000192 Aminotransferase class V domain M892_07635 195b1eace60ab6b2b3be02baae92c27c 404 SUPERFAMILY SSF53383 5 391 6.52E-116 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M892_07635 195b1eace60ab6b2b3be02baae92c27c 404 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 395 54.053 T 12-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 M892_07635 195b1eace60ab6b2b3be02baae92c27c 404 Gene3D G3DSA:3.40.640.10 16 262 7.6E-168 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M892_07635 195b1eace60ab6b2b3be02baae92c27c 404 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 404 5.5E-228 T 12-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 M892_07635 195b1eace60ab6b2b3be02baae92c27c 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 12-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site M892_07635 195b1eace60ab6b2b3be02baae92c27c 404 PIRSF PIRSF005572 2 384 2.5E-136 T 12-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 M892_07635 195b1eace60ab6b2b3be02baae92c27c 404 Gene3D G3DSA:3.90.1150.10 5 375 7.6E-168 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M892_09685 15f90008cc075a4f6542003d674ea99b 404 Gene3D G3DSA:1.25.40.10 107 248 1.8E-14 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_09685 15f90008cc075a4f6542003d674ea99b 404 SUPERFAMILY SSF48452 212 386 4.3E-8 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_09685 15f90008cc075a4f6542003d674ea99b 404 Gene3D G3DSA:1.25.40.10 269 399 2.3E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_09685 15f90008cc075a4f6542003d674ea99b 404 SUPERFAMILY SSF48452 41 246 1.14E-15 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_09685 15f90008cc075a4f6542003d674ea99b 404 SMART SM00028 148 181 0.29 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_09685 15f90008cc075a4f6542003d674ea99b 404 SMART SM00028 357 390 36.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_09685 15f90008cc075a4f6542003d674ea99b 404 SMART SM00028 71 104 1.8 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_09685 15f90008cc075a4f6542003d674ea99b 404 SMART SM00028 291 321 170.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_09685 15f90008cc075a4f6542003d674ea99b 404 Pfam PF13181 Tetratricopeptide repeat 148 178 0.021 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_09685 15f90008cc075a4f6542003d674ea99b 404 Gene3D G3DSA:1.25.40.10 23 106 6.5E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_09660 863e9c9cce44e9aa74ab81b23ecdd2ab 254 Pfam PF11932 Protein of unknown function (DUF3450) 13 249 2.5E-88 T 12-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 M892_09660 863e9c9cce44e9aa74ab81b23ecdd2ab 254 PIRSF PIRSF028069 4 254 5.8E-96 T 12-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 M892_08750 7edf281eaa2acfb3b5f265e9405ffb94 164 Gene3D G3DSA:3.30.70.1150 80 157 5.6E-28 T 12-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal M892_08750 7edf281eaa2acfb3b5f265e9405ffb94 164 SUPERFAMILY SSF55021 1 75 2.08E-22 T 12-10-2018 M892_08750 7edf281eaa2acfb3b5f265e9405ffb94 164 SUPERFAMILY SSF55021 79 162 6.51E-27 T 12-10-2018 M892_08750 7edf281eaa2acfb3b5f265e9405ffb94 164 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 159 1.6E-62 T 12-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 M892_08750 7edf281eaa2acfb3b5f265e9405ffb94 164 Pfam PF10369 Small subunit of acetolactate synthase 84 158 2.5E-25 T 12-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 M892_08750 7edf281eaa2acfb3b5f265e9405ffb94 164 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 75 2.0E-36 T 12-10-2018 M892_08750 7edf281eaa2acfb3b5f265e9405ffb94 164 Pfam PF13710 ACT domain 11 73 3.6E-18 T 12-10-2018 M892_08750 7edf281eaa2acfb3b5f265e9405ffb94 164 Gene3D G3DSA:3.30.70.260 1 78 8.4E-33 T 12-10-2018 M892_16920 4c2c537ce87bab67467333ba198e9da0 414 SUPERFAMILY SSF56112 197 371 1.27E-24 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily M892_16920 4c2c537ce87bab67467333ba198e9da0 414 Pfam PF00069 Protein kinase domain 205 370 2.7E-16 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 M892_16920 4c2c537ce87bab67467333ba198e9da0 414 SMART SM00364 37 57 290.0 T 12-10-2018 M892_16920 4c2c537ce87bab67467333ba198e9da0 414 SMART SM00364 60 79 34.0 T 12-10-2018 M892_16920 4c2c537ce87bab67467333ba198e9da0 414 SMART SM00364 128 147 480.0 T 12-10-2018 M892_16920 4c2c537ce87bab67467333ba198e9da0 414 SMART SM00364 105 124 10.0 T 12-10-2018 M892_16920 4c2c537ce87bab67467333ba198e9da0 414 SMART SM00364 151 170 200.0 T 12-10-2018 M892_16920 4c2c537ce87bab67467333ba198e9da0 414 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 211 238 - T 12-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 M892_16920 4c2c537ce87bab67467333ba198e9da0 414 Gene3D G3DSA:3.80.10.10 103 208 1.9E-18 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily M892_16920 4c2c537ce87bab67467333ba198e9da0 414 Gene3D G3DSA:1.10.510.10 306 400 1.1E-10 T 12-10-2018 M892_16920 4c2c537ce87bab67467333ba198e9da0 414 Gene3D G3DSA:3.30.200.20 209 290 2.0E-6 T 12-10-2018 M892_16920 4c2c537ce87bab67467333ba198e9da0 414 SMART SM00369 60 83 23.0 T 12-10-2018 IPR003591 Leucine-rich repeat, typical subtype M892_16920 4c2c537ce87bab67467333ba198e9da0 414 SMART SM00369 129 150 140.0 T 12-10-2018 IPR003591 Leucine-rich repeat, typical subtype M892_16920 4c2c537ce87bab67467333ba198e9da0 414 SMART SM00369 151 174 11.0 T 12-10-2018 IPR003591 Leucine-rich repeat, typical subtype M892_16920 4c2c537ce87bab67467333ba198e9da0 414 SMART SM00369 104 128 56.0 T 12-10-2018 IPR003591 Leucine-rich repeat, typical subtype M892_16920 4c2c537ce87bab67467333ba198e9da0 414 SMART SM00369 36 59 13.0 T 12-10-2018 IPR003591 Leucine-rich repeat, typical subtype M892_16920 4c2c537ce87bab67467333ba198e9da0 414 SUPERFAMILY SSF52075 39 197 9.29E-34 T 12-10-2018 M892_16920 4c2c537ce87bab67467333ba198e9da0 414 Gene3D G3DSA:3.80.10.10 10 102 5.3E-16 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily M892_16920 4c2c537ce87bab67467333ba198e9da0 414 Pfam PF13855 Leucine rich repeat 106 164 8.4E-8 T 12-10-2018 IPR001611 Leucine-rich repeat GO:0005515 M892_16920 4c2c537ce87bab67467333ba198e9da0 414 SMART SM00220 205 410 1.3E-5 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 M892_22975 4abf5cfb93050f34f0eec1ab012b79cf 464 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 462 1.1E-202 T 12-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 M892_22975 4abf5cfb93050f34f0eec1ab012b79cf 464 PIRSF PIRSF000204 1 464 1.6E-234 T 12-10-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 M892_22975 4abf5cfb93050f34f0eec1ab012b79cf 464 Gene3D G3DSA:3.40.50.1220 288 464 7.7E-89 T 12-10-2018 M892_22975 4abf5cfb93050f34f0eec1ab012b79cf 464 SUPERFAMILY SSF52467 291 464 1.14E-78 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily M892_01300 f58ccaec9c4dbd9f5c82198434a74057 506 Pfam PF06863 Protein of unknown function (DUF1254) 102 229 1.1E-27 T 12-10-2018 IPR010679 Domain of unknown function DUF1254 M892_01300 f58ccaec9c4dbd9f5c82198434a74057 506 Gene3D G3DSA:2.60.120.600 327 506 9.1E-58 T 12-10-2018 IPR037049 Domain of unknown function DUF1214, C-terminal domain superfamily M892_01300 f58ccaec9c4dbd9f5c82198434a74057 506 Gene3D G3DSA:2.60.40.1610 98 247 1.0E-80 T 12-10-2018 IPR037050 Domain of unknown function DUF1254 superfamily M892_01300 f58ccaec9c4dbd9f5c82198434a74057 506 Gene3D G3DSA:1.10.3360.10 71 311 1.0E-80 T 12-10-2018 IPR023289 VPA0735-like domain superfamily M892_01300 f58ccaec9c4dbd9f5c82198434a74057 506 SUPERFAMILY SSF160935 40 505 4.71E-142 T 12-10-2018 M892_01300 f58ccaec9c4dbd9f5c82198434a74057 506 Pfam PF06742 Protein of unknown function (DUF1214) 384 489 7.8E-26 T 12-10-2018 IPR010621 Domain of unknown function DUF1214 M892_03830 e4d60c75151fc90164b2776a1e390fd3 539 SUPERFAMILY SSF53850 34 535 7.42E-128 T 12-10-2018 M892_03830 e4d60c75151fc90164b2776a1e390fd3 539 Gene3D G3DSA:3.90.76.10 44 216 1.1E-141 T 12-10-2018 M892_03830 e4d60c75151fc90164b2776a1e390fd3 539 PIRSF PIRSF002741 2 538 7.6E-90 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 M892_03830 e4d60c75151fc90164b2776a1e390fd3 539 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 77 454 2.5E-84 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain M892_03830 e4d60c75151fc90164b2776a1e390fd3 539 Gene3D G3DSA:3.40.190.10 217 526 1.1E-141 T 12-10-2018 M892_03830 e4d60c75151fc90164b2776a1e390fd3 539 Gene3D G3DSA:3.10.105.10 296 514 1.1E-141 T 12-10-2018 M892_02120 cab46431489f94db584b1e5e5080aaf4 148 SUPERFAMILY SSF55811 9 133 2.44E-15 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 M892_02120 cab46431489f94db584b1e5e5080aaf4 148 Pfam PF00293 NUDIX domain 8 94 3.3E-10 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 M892_02120 cab46431489f94db584b1e5e5080aaf4 148 Gene3D G3DSA:3.90.79.10 4 133 6.8E-14 T 12-10-2018 M892_12685 f1fc2e7a39e46f1ddb0d4fc8a2cc83bd 178 Pfam PF00436 Single-strand binding protein family 6 106 6.6E-44 T 12-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 M892_12685 f1fc2e7a39e46f1ddb0d4fc8a2cc83bd 178 Gene3D G3DSA:2.40.50.140 2 146 3.7E-53 T 12-10-2018 M892_12685 f1fc2e7a39e46f1ddb0d4fc8a2cc83bd 178 Hamap MF_00984 Single-stranded DNA-binding protein. 6 118 39.834 T 12-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 M892_12685 f1fc2e7a39e46f1ddb0d4fc8a2cc83bd 178 PIRSF PIRSF002070 2 177 7.2E-38 T 12-10-2018 M892_12685 f1fc2e7a39e46f1ddb0d4fc8a2cc83bd 178 SUPERFAMILY SSF50249 4 178 1.61E-64 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M892_12685 f1fc2e7a39e46f1ddb0d4fc8a2cc83bd 178 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 178 9.4E-63 T 12-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 M892_15255 ac424c1b224dc948a0b4e0ebc45f51b9 351 SUPERFAMILY SSF48029 133 344 4.97E-67 T 12-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical M892_15255 ac424c1b224dc948a0b4e0ebc45f51b9 351 Gene3D G3DSA:1.10.220.30 214 351 1.8E-43 T 12-10-2018 M892_15255 ac424c1b224dc948a0b4e0ebc45f51b9 351 Gene3D G3DSA:1.10.220.30 20 103 4.1E-17 T 12-10-2018 M892_15255 ac424c1b224dc948a0b4e0ebc45f51b9 351 Pfam PF14841 FliG middle domain 134 206 4.5E-26 T 12-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain M892_15255 ac424c1b224dc948a0b4e0ebc45f51b9 351 SUPERFAMILY SSF48029 20 135 6.28E-20 T 12-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical M892_15255 ac424c1b224dc948a0b4e0ebc45f51b9 351 Pfam PF01706 FliG C-terminal domain 236 343 4.8E-41 T 12-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal M892_15255 ac424c1b224dc948a0b4e0ebc45f51b9 351 PIRSF PIRSF003161 18 351 2.5E-114 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 M892_15255 ac424c1b224dc948a0b4e0ebc45f51b9 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 214 239 8.3E-59 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 M892_15255 ac424c1b224dc948a0b4e0ebc45f51b9 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 53 79 8.3E-59 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 M892_15255 ac424c1b224dc948a0b4e0ebc45f51b9 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 245 265 8.3E-59 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 M892_15255 ac424c1b224dc948a0b4e0ebc45f51b9 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 24 40 8.3E-59 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 M892_15255 ac424c1b224dc948a0b4e0ebc45f51b9 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 267 287 8.3E-59 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 M892_15255 ac424c1b224dc948a0b4e0ebc45f51b9 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 133 156 8.3E-59 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 M892_15255 ac424c1b224dc948a0b4e0ebc45f51b9 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 291 317 8.3E-59 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 M892_15255 ac424c1b224dc948a0b4e0ebc45f51b9 351 Gene3D G3DSA:1.10.220.30 108 212 2.4E-29 T 12-10-2018 M892_15255 ac424c1b224dc948a0b4e0ebc45f51b9 351 Pfam PF14842 FliG N-terminal domain 24 124 6.8E-28 T 12-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain M892_15255 ac424c1b224dc948a0b4e0ebc45f51b9 351 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 20 349 4.7E-98 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 M892_13200 6d47418782c973a32ab8ce634e0edd85 390 Gene3D G3DSA:3.80.30.20 2 305 2.4E-96 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe M892_13200 6d47418782c973a32ab8ce634e0edd85 390 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 7 378 7.3E-137 T 12-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 M892_13200 6d47418782c973a32ab8ce634e0edd85 390 SUPERFAMILY SSF102114 4 386 4.05E-110 T 12-10-2018 M892_13200 6d47418782c973a32ab8ce634e0edd85 390 Pfam PF04055 Radical SAM superfamily 11 181 3.4E-18 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 M892_13200 6d47418782c973a32ab8ce634e0edd85 390 SMART SM00729 6 227 1.4E-53 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 M892_13200 6d47418782c973a32ab8ce634e0edd85 390 Pfam PF06969 HemN C-terminal domain 314 374 5.9E-8 T 12-10-2018 IPR010723 HemN, C-terminal M892_06495 362bd3a553e6e5d40b6110f289a5243b 574 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 2 565 4.6E-247 T 12-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 M892_06495 362bd3a553e6e5d40b6110f289a5243b 574 SUPERFAMILY SSF47831 24 143 8.37E-33 T 12-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 M892_06495 362bd3a553e6e5d40b6110f289a5243b 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 5.3E-30 T 12-10-2018 M892_06495 362bd3a553e6e5d40b6110f289a5243b 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 500 512 5.3E-30 T 12-10-2018 M892_06495 362bd3a553e6e5d40b6110f289a5243b 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 5.3E-30 T 12-10-2018 M892_06495 362bd3a553e6e5d40b6110f289a5243b 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 5.3E-30 T 12-10-2018 M892_06495 362bd3a553e6e5d40b6110f289a5243b 574 Pfam PF00391 PEP-utilising enzyme, mobile domain 152 222 2.9E-20 T 12-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 M892_06495 362bd3a553e6e5d40b6110f289a5243b 574 PIRSF PIRSF000732 1 574 2.7E-218 T 12-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 M892_06495 362bd3a553e6e5d40b6110f289a5243b 574 Pfam PF05524 PEP-utilising enzyme, N-terminal 4 126 2.0E-32 T 12-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 M892_06495 362bd3a553e6e5d40b6110f289a5243b 574 Gene3D G3DSA:3.20.20.60 234 574 6.1E-125 T 12-10-2018 M892_06495 362bd3a553e6e5d40b6110f289a5243b 574 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 184 195 - T 12-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 M892_06495 362bd3a553e6e5d40b6110f289a5243b 574 SUPERFAMILY SSF51621 249 549 1.1E-109 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 M892_06495 362bd3a553e6e5d40b6110f289a5243b 574 Gene3D G3DSA:3.50.30.10 4 233 4.5E-80 T 12-10-2018 M892_06495 362bd3a553e6e5d40b6110f289a5243b 574 SUPERFAMILY SSF52009 125 243 1.96E-34 T 12-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 M892_06495 362bd3a553e6e5d40b6110f289a5243b 574 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 250 541 7.2E-124 T 12-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 M892_06495 362bd3a553e6e5d40b6110f289a5243b 574 Gene3D G3DSA:1.10.274.10 21 146 4.5E-80 T 12-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 M892_00290 cb9aaf7a0df96566bd25d17de123bcc2 391 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 8 373 2.7E-191 T 12-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 M892_00290 cb9aaf7a0df96566bd25d17de123bcc2 391 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 5 380 23.679 T 12-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 M892_00290 cb9aaf7a0df96566bd25d17de123bcc2 391 Pfam PF06965 Na+/H+ antiporter 1 7 373 8.5E-145 T 12-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 M892_00290 cb9aaf7a0df96566bd25d17de123bcc2 391 Gene3D G3DSA:1.20.1530.10 3 381 7.5E-148 T 12-10-2018 IPR023171 Na/H antiporter domain superfamily M892_13930 c0e3a1c589d617bb0e8da4119ed07339 470 Gene3D G3DSA:3.40.120.10 1 170 3.6E-47 T 12-10-2018 M892_13930 c0e3a1c589d617bb0e8da4119ed07339 470 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 162 262 1.7E-24 T 12-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M892_13930 c0e3a1c589d617bb0e8da4119ed07339 470 Gene3D G3DSA:3.40.120.10 263 368 5.9E-60 T 12-10-2018 M892_13930 c0e3a1c589d617bb0e8da4119ed07339 470 SUPERFAMILY SSF55957 374 466 6.02E-18 T 12-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M892_13930 c0e3a1c589d617bb0e8da4119ed07339 470 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 267 378 1.1E-25 T 12-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M892_13930 c0e3a1c589d617bb0e8da4119ed07339 470 SUPERFAMILY SSF53738 250 379 2.59E-30 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M892_13930 c0e3a1c589d617bb0e8da4119ed07339 470 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 417 466 7.7E-10 T 12-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M892_13930 c0e3a1c589d617bb0e8da4119ed07339 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 94 108 2.1E-11 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M892_13930 c0e3a1c589d617bb0e8da4119ed07339 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 214 227 2.1E-11 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M892_13930 c0e3a1c589d617bb0e8da4119ed07339 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 242 257 2.1E-11 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M892_13930 c0e3a1c589d617bb0e8da4119ed07339 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 180 199 2.1E-11 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M892_13930 c0e3a1c589d617bb0e8da4119ed07339 470 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 2 137 5.2E-38 T 12-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M892_13930 c0e3a1c589d617bb0e8da4119ed07339 470 SUPERFAMILY SSF53738 2 187 8.05E-40 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M892_13930 c0e3a1c589d617bb0e8da4119ed07339 470 Gene3D G3DSA:3.40.120.10 171 365 5.9E-60 T 12-10-2018 M892_13930 c0e3a1c589d617bb0e8da4119ed07339 470 Gene3D G3DSA:3.30.310.50 369 469 3.3E-16 T 12-10-2018 M892_03750 e9ec5d44475eec3fd2c69704387e1226 629 SUPERFAMILY SSF51206 7 135 7.46E-30 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like M892_03750 e9ec5d44475eec3fd2c69704387e1226 629 SMART SM00116 159 216 3.9E-5 T 12-10-2018 IPR000644 CBS domain M892_03750 e9ec5d44475eec3fd2c69704387e1226 629 SMART SM00116 233 280 7.9E-7 T 12-10-2018 IPR000644 CBS domain M892_03750 e9ec5d44475eec3fd2c69704387e1226 629 Pfam PF00027 Cyclic nucleotide-binding domain 37 118 3.9E-15 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain M892_03750 e9ec5d44475eec3fd2c69704387e1226 629 SUPERFAMILY SSF54631 146 279 1.3E-26 T 12-10-2018 M892_03750 e9ec5d44475eec3fd2c69704387e1226 629 Pfam PF00571 CBS domain 152 214 1.5E-7 T 12-10-2018 IPR000644 CBS domain M892_03750 e9ec5d44475eec3fd2c69704387e1226 629 Pfam PF00571 CBS domain 226 278 2.1E-10 T 12-10-2018 IPR000644 CBS domain M892_03750 e9ec5d44475eec3fd2c69704387e1226 629 Gene3D G3DSA:2.60.120.10 1 144 1.4E-25 T 12-10-2018 IPR014710 RmlC-like jelly roll fold M892_03750 e9ec5d44475eec3fd2c69704387e1226 629 Gene3D G3DSA:3.10.580.10 145 283 9.6E-33 T 12-10-2018 M892_03750 e9ec5d44475eec3fd2c69704387e1226 629 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 479 622 2.7E-47 T 12-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding M892_03750 e9ec5d44475eec3fd2c69704387e1226 629 SMART SM00100 17 134 3.2E-9 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain M892_03750 e9ec5d44475eec3fd2c69704387e1226 629 Pfam PF03445 Putative nucleotidyltransferase DUF294 305 442 3.8E-46 T 12-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 M892_15480 610a9eecf46a0de4f44888166316e710 310 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 6 300 53.952 T 12-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 M892_15480 610a9eecf46a0de4f44888166316e710 310 PIRSF PIRSF037167 2 307 5.2E-150 T 12-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 M892_15480 610a9eecf46a0de4f44888166316e710 310 Gene3D G3DSA:3.40.50.150 103 285 6.6E-46 T 12-10-2018 M892_15480 610a9eecf46a0de4f44888166316e710 310 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 204 210 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 M892_15480 610a9eecf46a0de4f44888166316e710 310 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 13 295 9.8E-139 T 12-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 M892_15480 610a9eecf46a0de4f44888166316e710 310 SUPERFAMILY SSF53335 16 294 8.59E-50 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M892_15480 610a9eecf46a0de4f44888166316e710 310 Gene3D G3DSA:1.10.8.10 36 102 1.4E-5 T 12-10-2018 M892_15480 610a9eecf46a0de4f44888166316e710 310 Pfam PF05175 Methyltransferase small domain 134 216 7.3E-18 T 12-10-2018 IPR007848 Methyltransferase small domain GO:0008168 M892_15480 610a9eecf46a0de4f44888166316e710 310 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 15 303 1.1E-96 T 12-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 M892_25350 9134cd2b89eb0c7724c1707e46c80ac0 623 SUPERFAMILY SSF55804 1 148 2.49E-39 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 M892_25350 9134cd2b89eb0c7724c1707e46c80ac0 623 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 528 618 5.6E-16 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 M892_25350 9134cd2b89eb0c7724c1707e46c80ac0 623 Gene3D G3DSA:3.40.930.10 2 148 3.9E-43 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 M892_25350 9134cd2b89eb0c7724c1707e46c80ac0 623 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 7 133 5.7E-38 T 12-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 M892_25350 9134cd2b89eb0c7724c1707e46c80ac0 623 Gene3D G3DSA:3.40.50.2300 519 622 1.2E-33 T 12-10-2018 M892_25350 9134cd2b89eb0c7724c1707e46c80ac0 623 SUPERFAMILY SSF52794 525 618 8.02E-29 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 M892_25350 9134cd2b89eb0c7724c1707e46c80ac0 623 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 177 497 4.1E-77 T 12-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 M892_25350 9134cd2b89eb0c7724c1707e46c80ac0 623 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 528 610 2.3E-27 T 12-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 M892_25350 9134cd2b89eb0c7724c1707e46c80ac0 623 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 148 1.9E-36 T 12-10-2018 IPR002178 PTS EIIA type-2 domain M892_25350 9134cd2b89eb0c7724c1707e46c80ac0 623 Pfam PF02378 Phosphotransferase system, EIIC 189 446 3.0E-12 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 M892_06260 7a2e2f463284097043f19b327954acab 588 Gene3D G3DSA:3.90.700.10 246 350 9.8E-170 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 M892_06260 7a2e2f463284097043f19b327954acab 588 Pfam PF02910 Fumarate reductase flavoprotein C-term 460 588 2.4E-36 T 12-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 M892_06260 7a2e2f463284097043f19b327954acab 588 Gene3D G3DSA:1.20.58.100 431 547 1.5E-37 T 12-10-2018 M892_06260 7a2e2f463284097043f19b327954acab 588 SUPERFAMILY SSF46977 452 588 5.1E-46 T 12-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 M892_06260 7a2e2f463284097043f19b327954acab 588 PIRSF PIRSF000171 1 580 8.6E-49 T 12-10-2018 M892_06260 7a2e2f463284097043f19b327954acab 588 SUPERFAMILY SSF51905 5 443 7.07E-72 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_06260 7a2e2f463284097043f19b327954acab 588 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 12-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 M892_06260 7a2e2f463284097043f19b327954acab 588 Gene3D G3DSA:3.50.50.60 9 416 9.8E-170 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_06260 7a2e2f463284097043f19b327954acab 588 SUPERFAMILY SSF56425 236 356 2.69E-42 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 M892_06260 7a2e2f463284097043f19b327954acab 588 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 588 3.9E-240 T 12-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 M892_06260 7a2e2f463284097043f19b327954acab 588 Pfam PF00890 FAD binding domain 9 405 4.0E-118 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 M892_06260 7a2e2f463284097043f19b327954acab 588 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 6 588 3.9E-274 T 12-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 M892_06260 7a2e2f463284097043f19b327954acab 588 Gene3D G3DSA:4.10.80.40 548 588 1.2E-23 T 12-10-2018 M892_17830 b2555b4513b136944478b6a4cec8a809 267 Pfam PF13358 DDE superfamily endonuclease 81 224 2.0E-32 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_17830 b2555b4513b136944478b6a4cec8a809 267 Gene3D G3DSA:3.30.420.470 53 251 5.6E-12 T 12-10-2018 M892_17830 b2555b4513b136944478b6a4cec8a809 267 SUPERFAMILY SSF53098 133 230 1.09E-7 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_17830 b2555b4513b136944478b6a4cec8a809 267 Pfam PF13592 Winged helix-turn helix 10 67 4.8E-20 T 12-10-2018 IPR025959 Winged helix-turn helix domain M892_09915 35533a8e3da4c78b7f8fb70e9415d87c 848 Gene3D G3DSA:1.20.1480.50 330 427 2.6E-8 T 12-10-2018 M892_09915 35533a8e3da4c78b7f8fb70e9415d87c 848 Gene3D G3DSA:3.30.70.270 428 595 6.8E-40 T 12-10-2018 M892_09915 35533a8e3da4c78b7f8fb70e9415d87c 848 Gene3D G3DSA:3.30.450.20 127 219 6.0E-12 T 12-10-2018 M892_09915 35533a8e3da4c78b7f8fb70e9415d87c 848 Pfam PF02743 Cache domain 47 327 5.1E-20 T 12-10-2018 IPR033479 Double Cache domain 1 M892_09915 35533a8e3da4c78b7f8fb70e9415d87c 848 SUPERFAMILY SSF141868 600 846 6.28E-79 T 12-10-2018 IPR035919 EAL domain superfamily M892_09915 35533a8e3da4c78b7f8fb70e9415d87c 848 SMART SM00304 368 421 3.2E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M892_09915 35533a8e3da4c78b7f8fb70e9415d87c 848 SUPERFAMILY SSF158472 369 418 1.05E-6 T 12-10-2018 M892_09915 35533a8e3da4c78b7f8fb70e9415d87c 848 Pfam PF00990 Diguanylate cyclase, GGDEF domain 429 576 3.1E-30 T 12-10-2018 IPR000160 GGDEF domain M892_09915 35533a8e3da4c78b7f8fb70e9415d87c 848 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 428 579 1.5E-27 T 12-10-2018 IPR000160 GGDEF domain M892_09915 35533a8e3da4c78b7f8fb70e9415d87c 848 SMART SM00267 416 582 3.4E-41 T 12-10-2018 IPR000160 GGDEF domain M892_09915 35533a8e3da4c78b7f8fb70e9415d87c 848 SMART SM00052 592 839 1.8E-91 T 12-10-2018 IPR001633 EAL domain M892_09915 35533a8e3da4c78b7f8fb70e9415d87c 848 Pfam PF00563 EAL domain 599 833 1.5E-67 T 12-10-2018 IPR001633 EAL domain M892_09915 35533a8e3da4c78b7f8fb70e9415d87c 848 Gene3D G3DSA:3.20.20.450 596 847 6.3E-86 T 12-10-2018 IPR035919 EAL domain superfamily M892_09915 35533a8e3da4c78b7f8fb70e9415d87c 848 SUPERFAMILY SSF55073 432 584 7.85E-35 T 12-10-2018 IPR029787 Nucleotide cyclase M892_10310 2ee111dc058535ab21af3bd8f0293139 318 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 122 315 2.9E-29 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M892_10310 2ee111dc058535ab21af3bd8f0293139 318 SUPERFAMILY SSF161098 99 300 1.09E-24 T 12-10-2018 IPR035906 MetI-like superfamily M892_10310 2ee111dc058535ab21af3bd8f0293139 318 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 24 75 2.6E-8 T 12-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain M892_10310 2ee111dc058535ab21af3bd8f0293139 318 Gene3D G3DSA:1.10.3720.10 92 312 2.2E-24 T 12-10-2018 IPR035906 MetI-like superfamily M892_13270 11b92b4c1eed7fbc85fcdd176295a25c 165 Pfam PF10263 SprT-like family 16 114 4.2E-20 T 12-10-2018 IPR006640 SprT-like M892_13270 11b92b4c1eed7fbc85fcdd176295a25c 165 Pfam PF17283 SprT-like zinc ribbon domain 120 160 1.3E-10 T 12-10-2018 IPR035240 SprT-like, zinc ribbon domain M892_13270 11b92b4c1eed7fbc85fcdd176295a25c 165 Hamap MF_00746 Protein SprT [sprT]. 7 160 42.167 T 12-10-2018 IPR023483 Uncharacterised protein family SprT M892_13270 11b92b4c1eed7fbc85fcdd176295a25c 165 SMART SM00731 11 160 1.3E-56 T 12-10-2018 IPR006640 SprT-like M892_21470 040bb82e191f2aacbd273470dff9a561 374 PIRSF PIRSF000345 4 332 1.9E-101 T 12-10-2018 IPR009160 Acyl-CoA desaturase, haem/steroid binding domain-containing GO:0004768|GO:0006636|GO:0016021 MetaCyc: PWY-5987|MetaCyc: PWY-5996 M892_21470 040bb82e191f2aacbd273470dff9a561 374 Pfam PF00487 Fatty acid desaturase 45 262 2.0E-20 T 12-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 M892_21470 040bb82e191f2aacbd273470dff9a561 374 PRINTS PR00075 Fatty acid desaturase family 1 signature 188 209 7.0E-32 T 12-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 M892_21470 040bb82e191f2aacbd273470dff9a561 374 PRINTS PR00075 Fatty acid desaturase family 1 signature 37 59 7.0E-32 T 12-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 M892_21470 040bb82e191f2aacbd273470dff9a561 374 PRINTS PR00075 Fatty acid desaturase family 1 signature 231 245 7.0E-32 T 12-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 M892_21470 040bb82e191f2aacbd273470dff9a561 374 PRINTS PR00075 Fatty acid desaturase family 1 signature 60 80 7.0E-32 T 12-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 M892_21470 040bb82e191f2aacbd273470dff9a561 374 PRINTS PR00075 Fatty acid desaturase family 1 signature 98 127 7.0E-32 T 12-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 M892_06240 4b4ecf484cdc8869a8075b208ce24d8b 388 Gene3D G3DSA:3.30.470.20 1 234 6.1E-92 T 12-10-2018 M892_06240 4b4ecf484cdc8869a8075b208ce24d8b 388 Pfam PF08442 ATP-grasp domain 2 203 4.0E-79 T 12-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 M892_06240 4b4ecf484cdc8869a8075b208ce24d8b 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 1.9E-173 T 12-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 M892_06240 4b4ecf484cdc8869a8075b208ce24d8b 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 12-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 M892_06240 4b4ecf484cdc8869a8075b208ce24d8b 388 SUPERFAMILY SSF52210 239 385 3.66E-54 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 M892_06240 4b4ecf484cdc8869a8075b208ce24d8b 388 SUPERFAMILY SSF56059 1 238 4.95E-79 T 12-10-2018 M892_06240 4b4ecf484cdc8869a8075b208ce24d8b 388 PIRSF PIRSF001554 1 388 2.2E-154 T 12-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 M892_06240 4b4ecf484cdc8869a8075b208ce24d8b 388 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 43.164 T 12-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 M892_06240 4b4ecf484cdc8869a8075b208ce24d8b 388 Pfam PF00549 CoA-ligase 262 382 9.3E-25 T 12-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 M892_06240 4b4ecf484cdc8869a8075b208ce24d8b 388 Gene3D G3DSA:3.40.50.261 240 388 1.9E-56 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 M892_06240 4b4ecf484cdc8869a8075b208ce24d8b 388 Gene3D G3DSA:3.30.1490.20 21 104 6.1E-92 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 M892_11745 fb49a88f3cab176542beccb306e4919f 295 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 293 2.3E-106 T 12-10-2018 M892_11745 fb49a88f3cab176542beccb306e4919f 295 SUPERFAMILY SSF53335 44 273 5.33E-46 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M892_11745 fb49a88f3cab176542beccb306e4919f 295 Gene3D G3DSA:3.40.50.150 102 294 2.6E-58 T 12-10-2018 M892_11745 fb49a88f3cab176542beccb306e4919f 295 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 287 4.4E-110 T 12-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 M892_11745 fb49a88f3cab176542beccb306e4919f 295 PIRSF PIRSF000401 1 295 3.0E-101 T 12-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 M892_11745 fb49a88f3cab176542beccb306e4919f 295 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 293 34.114 T 12-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 M892_26840 36cd328dbf4049d7b417bd3449cc725d 164 SUPERFAMILY SSF52058 27 144 3.4E-6 T 12-10-2018 M892_26840 36cd328dbf4049d7b417bd3449cc725d 164 Gene3D G3DSA:3.80.10.10 2 161 1.2E-13 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily M892_10675 b29eff3aa503fdf4457c2a801110d436 613 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 607 45.255 T 12-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 M892_10675 b29eff3aa503fdf4457c2a801110d436 613 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 12-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 M892_10675 b29eff3aa503fdf4457c2a801110d436 613 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 607 1.4E-267 T 12-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 M892_10675 b29eff3aa503fdf4457c2a801110d436 613 SUPERFAMILY SSF143975 3 420 1.24E-137 T 12-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 M892_10675 b29eff3aa503fdf4457c2a801110d436 613 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 12-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 M892_10675 b29eff3aa503fdf4457c2a801110d436 613 Pfam PF00920 Dehydratase family 34 604 1.0E-221 T 12-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 M892_10675 b29eff3aa503fdf4457c2a801110d436 613 Gene3D G3DSA:3.50.30.80 421 573 4.2E-56 T 12-10-2018 M892_10675 b29eff3aa503fdf4457c2a801110d436 613 SUPERFAMILY SSF52016 421 608 9.42E-62 T 12-10-2018 M892_11845 eb93c3434aa33703db5c771daaa54d72 159 Pfam PF00588 SpoU rRNA Methylase family 3 146 5.0E-34 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 M892_11845 eb93c3434aa33703db5c771daaa54d72 159 SUPERFAMILY SSF75217 2 157 2.03E-43 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases M892_11845 eb93c3434aa33703db5c771daaa54d72 159 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 156 32.924 T 12-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 M892_11845 eb93c3434aa33703db5c771daaa54d72 159 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 157 2.0E-59 T 12-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 M892_11845 eb93c3434aa33703db5c771daaa54d72 159 Gene3D G3DSA:3.40.1280.10 1 159 3.2E-65 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal M892_11845 eb93c3434aa33703db5c771daaa54d72 159 PIRSF PIRSF029256 1 159 7.0E-67 T 12-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 M892_12365 1448db9cfd251e8f41300e249d278b2a 158 TIGRFAM TIGR00754 bfr: bacterioferritin 1 157 4.7E-82 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 M892_12365 1448db9cfd251e8f41300e249d278b2a 158 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 M892_12365 1448db9cfd251e8f41300e249d278b2a 158 PRINTS PR00601 Bacterioferritin signature 23 43 1.5E-72 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 M892_12365 1448db9cfd251e8f41300e249d278b2a 158 PRINTS PR00601 Bacterioferritin signature 44 64 1.5E-72 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 M892_12365 1448db9cfd251e8f41300e249d278b2a 158 PRINTS PR00601 Bacterioferritin signature 107 127 1.5E-72 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 M892_12365 1448db9cfd251e8f41300e249d278b2a 158 PRINTS PR00601 Bacterioferritin signature 3 22 1.5E-72 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 M892_12365 1448db9cfd251e8f41300e249d278b2a 158 PRINTS PR00601 Bacterioferritin signature 65 85 1.5E-72 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 M892_12365 1448db9cfd251e8f41300e249d278b2a 158 PRINTS PR00601 Bacterioferritin signature 86 106 1.5E-72 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 M892_12365 1448db9cfd251e8f41300e249d278b2a 158 PRINTS PR00601 Bacterioferritin signature 128 149 1.5E-72 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 M892_12365 1448db9cfd251e8f41300e249d278b2a 158 PIRSF PIRSF002560 1 157 5.2E-73 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 M892_12365 1448db9cfd251e8f41300e249d278b2a 158 Gene3D G3DSA:1.20.1260.10 1 158 1.1E-71 T 12-10-2018 IPR012347 Ferritin-like M892_12365 1448db9cfd251e8f41300e249d278b2a 158 Pfam PF00210 Ferritin-like domain 8 143 1.5E-40 T 12-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 M892_12365 1448db9cfd251e8f41300e249d278b2a 158 SUPERFAMILY SSF47240 1 153 1.25E-55 T 12-10-2018 IPR009078 Ferritin-like superfamily M892_27250 76792775903fc1d9576093498f574290 302 SUPERFAMILY SSF48179 168 291 5.67E-36 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 M892_27250 76792775903fc1d9576093498f574290 302 Gene3D G3DSA:3.40.50.720 2 167 4.1E-40 T 12-10-2018 M892_27250 76792775903fc1d9576093498f574290 302 SUPERFAMILY SSF51735 6 167 1.2E-34 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_27250 76792775903fc1d9576093498f574290 302 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 9 22 - T 12-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 M892_27250 76792775903fc1d9576093498f574290 302 PIRSF PIRSF000103 1 293 2.7E-56 T 12-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 M892_27250 76792775903fc1d9576093498f574290 302 Gene3D G3DSA:1.10.1040.10 168 292 1.7E-38 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 M892_27250 76792775903fc1d9576093498f574290 302 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 169 288 7.3E-32 T 12-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 M892_27250 76792775903fc1d9576093498f574290 302 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 7 165 3.4E-38 T 12-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 M892_13955 5c65e2fc0a21e4138b45854c344f3d29 331 Pfam PF00005 ABC transporter 35 192 1.7E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_13955 5c65e2fc0a21e4138b45854c344f3d29 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 243 308 5.1E-17 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 M892_13955 5c65e2fc0a21e4138b45854c344f3d29 331 Gene3D G3DSA:3.40.50.300 8 331 9.7E-78 T 12-10-2018 M892_13955 5c65e2fc0a21e4138b45854c344f3d29 331 SMART SM00382 43 241 6.8E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_13955 5c65e2fc0a21e4138b45854c344f3d29 331 SUPERFAMILY SSF52540 9 262 4.5E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_13955 5c65e2fc0a21e4138b45854c344f3d29 331 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_13955 5c65e2fc0a21e4138b45854c344f3d29 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 241 328 1.3E-22 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 M892_21250 f6aafd6036b983c1f4cc7225edb853f8 327 Pfam PF02653 Branched-chain amino acid transport system / permease component 51 319 2.1E-53 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 M892_00105 e3e4ecef15dc7f67bf0c1dfa660e121f 509 Gene3D G3DSA:1.10.10.60 454 509 7.4E-9 T 12-10-2018 M892_00105 e3e4ecef15dc7f67bf0c1dfa660e121f 509 SUPERFAMILY SSF55781 7 163 2.18E-17 T 12-10-2018 M892_00105 e3e4ecef15dc7f67bf0c1dfa660e121f 509 SMART SM00065 21 170 2.2E-8 T 12-10-2018 IPR003018 GAF domain GO:0005515 M892_00105 e3e4ecef15dc7f67bf0c1dfa660e121f 509 SUPERFAMILY SSF46689 459 507 6.72E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_00105 e3e4ecef15dc7f67bf0c1dfa660e121f 509 SMART SM00382 214 358 1.3E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_00105 e3e4ecef15dc7f67bf0c1dfa660e121f 509 Gene3D G3DSA:1.10.8.60 365 430 2.3E-15 T 12-10-2018 M892_00105 e3e4ecef15dc7f67bf0c1dfa660e121f 509 SUPERFAMILY SSF52540 193 437 1.13E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_00105 e3e4ecef15dc7f67bf0c1dfa660e121f 509 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 280 295 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 M892_00105 e3e4ecef15dc7f67bf0c1dfa660e121f 509 Gene3D G3DSA:3.40.50.300 180 364 2.9E-63 T 12-10-2018 M892_00105 e3e4ecef15dc7f67bf0c1dfa660e121f 509 Gene3D G3DSA:3.30.450.40 7 175 5.8E-14 T 12-10-2018 IPR029016 GAF-like domain superfamily M892_00105 e3e4ecef15dc7f67bf0c1dfa660e121f 509 Pfam PF00158 Sigma-54 interaction domain 195 361 2.8E-69 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 M892_00105 e3e4ecef15dc7f67bf0c1dfa660e121f 509 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 218 231 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 M892_21065 b382cd71a1f055992d5b1a96055f1235 186 Pfam PF16964 Putative tight adherence pilin protein F 11 186 5.3E-27 T 12-10-2018 IPR031582 Putative tight adherence pilin protein F M892_08735 25e98d5ba929a4618d89281e89725a65 470 PRINTS PR01050 Pyruvate kinase family signature 244 268 1.9E-79 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M892_08735 25e98d5ba929a4618d89281e89725a65 470 PRINTS PR01050 Pyruvate kinase family signature 186 200 1.9E-79 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M892_08735 25e98d5ba929a4618d89281e89725a65 470 PRINTS PR01050 Pyruvate kinase family signature 294 312 1.9E-79 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M892_08735 25e98d5ba929a4618d89281e89725a65 470 PRINTS PR01050 Pyruvate kinase family signature 59 75 1.9E-79 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M892_08735 25e98d5ba929a4618d89281e89725a65 470 PRINTS PR01050 Pyruvate kinase family signature 313 329 1.9E-79 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M892_08735 25e98d5ba929a4618d89281e89725a65 470 PRINTS PR01050 Pyruvate kinase family signature 217 243 1.9E-79 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M892_08735 25e98d5ba929a4618d89281e89725a65 470 PRINTS PR01050 Pyruvate kinase family signature 269 293 1.9E-79 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M892_08735 25e98d5ba929a4618d89281e89725a65 470 SUPERFAMILY SSF51621 1 339 3.14E-102 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 M892_08735 25e98d5ba929a4618d89281e89725a65 470 SUPERFAMILY SSF52935 323 469 1.44E-33 T 12-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M892_08735 25e98d5ba929a4618d89281e89725a65 470 Gene3D G3DSA:3.40.1380.20 336 467 5.4E-41 T 12-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M892_08735 25e98d5ba929a4618d89281e89725a65 470 Gene3D G3DSA:2.40.33.10 71 167 9.9E-148 T 12-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M892_08735 25e98d5ba929a4618d89281e89725a65 470 Gene3D G3DSA:3.20.20.60 4 332 9.9E-148 T 12-10-2018 M892_08735 25e98d5ba929a4618d89281e89725a65 470 SUPERFAMILY SSF50800 70 167 4.88E-29 T 12-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily M892_08735 25e98d5ba929a4618d89281e89725a65 470 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 12-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M892_08735 25e98d5ba929a4618d89281e89725a65 470 Pfam PF02887 Pyruvate kinase, alpha/beta domain 356 468 1.6E-27 T 12-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M892_08735 25e98d5ba929a4618d89281e89725a65 470 Pfam PF00224 Pyruvate kinase, barrel domain 1 341 9.6E-155 T 12-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M892_08735 25e98d5ba929a4618d89281e89725a65 470 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 469 4.9E-187 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M892_09250 bc446df61550d17a08ed40fbc2a11bd7 183 PIRSF PIRSF039093 1 175 4.7E-88 T 12-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 M892_09250 bc446df61550d17a08ed40fbc2a11bd7 183 Pfam PF00227 Proteasome subunit 2 169 1.5E-23 T 12-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 M892_09250 bc446df61550d17a08ed40fbc2a11bd7 183 SUPERFAMILY SSF56235 2 172 1.1E-57 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal M892_09250 bc446df61550d17a08ed40fbc2a11bd7 183 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 172 4.1E-87 T 12-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 M892_09250 bc446df61550d17a08ed40fbc2a11bd7 183 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 42.105 T 12-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 M892_09250 bc446df61550d17a08ed40fbc2a11bd7 183 Gene3D G3DSA:3.60.20.10 1 173 2.2E-67 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal M892_12990 0f3d0099a91fe26396180c2176b3bd51 266 SUPERFAMILY SSF49785 2 156 2.55E-17 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily M892_12990 0f3d0099a91fe26396180c2176b3bd51 266 Gene3D G3DSA:2.60.120.260 26 157 3.7E-8 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily M892_21235 8d5aec8532f68c3bfb9be4e8c6b7f525 778 SMART SM00052 516 759 3.0E-71 T 12-10-2018 IPR001633 EAL domain M892_21235 8d5aec8532f68c3bfb9be4e8c6b7f525 778 Pfam PF00990 Diguanylate cyclase, GGDEF domain 340 502 3.9E-37 T 12-10-2018 IPR000160 GGDEF domain M892_21235 8d5aec8532f68c3bfb9be4e8c6b7f525 778 SUPERFAMILY SSF141868 521 767 2.48E-67 T 12-10-2018 IPR035919 EAL domain superfamily M892_21235 8d5aec8532f68c3bfb9be4e8c6b7f525 778 SMART SM00267 329 506 1.4E-42 T 12-10-2018 IPR000160 GGDEF domain M892_21235 8d5aec8532f68c3bfb9be4e8c6b7f525 778 SUPERFAMILY SSF55073 345 507 1.57E-38 T 12-10-2018 IPR029787 Nucleotide cyclase M892_21235 8d5aec8532f68c3bfb9be4e8c6b7f525 778 Gene3D G3DSA:3.30.70.270 334 517 4.1E-47 T 12-10-2018 M892_21235 8d5aec8532f68c3bfb9be4e8c6b7f525 778 Pfam PF00563 EAL domain 522 754 6.2E-62 T 12-10-2018 IPR001633 EAL domain M892_21235 8d5aec8532f68c3bfb9be4e8c6b7f525 778 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 338 505 2.4E-32 T 12-10-2018 IPR000160 GGDEF domain M892_21235 8d5aec8532f68c3bfb9be4e8c6b7f525 778 Gene3D G3DSA:3.20.20.450 518 772 2.8E-72 T 12-10-2018 IPR035919 EAL domain superfamily M892_09770 9fa0928cdaab2db75f9cdc0f0e9b1199 188 Gene3D G3DSA:3.90.79.10 7 188 7.3E-49 T 12-10-2018 M892_09770 9fa0928cdaab2db75f9cdc0f0e9b1199 188 ProSitePatterns PS00893 Nudix box signature. 80 101 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 M892_09770 9fa0928cdaab2db75f9cdc0f0e9b1199 188 Pfam PF00293 NUDIX domain 46 154 2.0E-15 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 M892_09770 9fa0928cdaab2db75f9cdc0f0e9b1199 188 SUPERFAMILY SSF55811 4 182 2.98E-40 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 M892_26030 f3993e6f3951c2f5b895e7c878a526e9 72 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 38 69 1.4E-7 T 12-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 M892_26030 f3993e6f3951c2f5b895e7c878a526e9 72 Gene3D G3DSA:1.20.120.910 4 72 1.3E-14 T 12-10-2018 M892_26030 f3993e6f3951c2f5b895e7c878a526e9 72 SUPERFAMILY SSF57716 39 71 4.52E-6 T 12-10-2018 M892_24010 3b7766b55131a4b1b6590149533d0962 290 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 3 275 4.6E-82 T 12-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 M892_24010 3b7766b55131a4b1b6590149533d0962 290 Gene3D G3DSA:1.10.357.140 13 167 1.4E-18 T 12-10-2018 M892_24010 3b7766b55131a4b1b6590149533d0962 290 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 57 79 - T 12-10-2018 IPR030470 UbiA prenyltransferase conserved site M892_24010 3b7766b55131a4b1b6590149533d0962 290 Pfam PF01040 UbiA prenyltransferase family 18 269 2.0E-53 T 12-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 M892_24010 3b7766b55131a4b1b6590149533d0962 290 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 1 284 16.882 T 12-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 M892_15195 6226c95af082412942b00d3a2e3dec0b 377 PRINTS PR00207 Flagellin signature 37 54 1.5E-27 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 M892_15195 6226c95af082412942b00d3a2e3dec0b 377 PRINTS PR00207 Flagellin signature 111 134 1.5E-27 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 M892_15195 6226c95af082412942b00d3a2e3dec0b 377 PRINTS PR00207 Flagellin signature 76 95 1.5E-27 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 M892_15195 6226c95af082412942b00d3a2e3dec0b 377 Pfam PF07196 Flagellin hook IN motif 204 246 2.1E-10 T 12-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 M892_15195 6226c95af082412942b00d3a2e3dec0b 377 SUPERFAMILY SSF64518 5 376 2.09E-98 T 12-10-2018 M892_15195 6226c95af082412942b00d3a2e3dec0b 377 Gene3D G3DSA:1.10.8.410 328 376 8.0E-19 T 12-10-2018 M892_15195 6226c95af082412942b00d3a2e3dec0b 377 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 9.9E-45 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 M892_15195 6226c95af082412942b00d3a2e3dec0b 377 Gene3D G3DSA:1.20.1330.10 44 327 4.3E-79 T 12-10-2018 M892_15195 6226c95af082412942b00d3a2e3dec0b 377 Gene3D G3DSA:3.30.70.2120 174 275 4.3E-79 T 12-10-2018 M892_15195 6226c95af082412942b00d3a2e3dec0b 377 Pfam PF00700 Bacterial flagellin C-terminal helical region 293 376 9.2E-24 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 M892_08840 1b017741b52d63bec0af1af0272fabb0 268 SUPERFAMILY SSF56300 3 252 1.06E-56 T 12-10-2018 M892_08840 1b017741b52d63bec0af1af0272fabb0 268 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 268 47.278 T 12-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 M892_08840 1b017741b52d63bec0af1af0272fabb0 268 PIRSF PIRSF000903 1 268 7.3E-121 T 12-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 M892_08840 1b017741b52d63bec0af1af0272fabb0 268 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 266 1.2E-119 T 12-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 M892_08840 1b017741b52d63bec0af1af0272fabb0 268 Gene3D G3DSA:3.60.21.10 1 268 6.9E-78 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like M892_08840 1b017741b52d63bec0af1af0272fabb0 268 Pfam PF00149 Calcineurin-like phosphoesterase 4 146 1.1E-13 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 M892_03755 8c582ed400775b4f2e124561ea1f0ef9 239 Pfam PF00929 Exonuclease 50 219 2.1E-12 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III M892_03755 8c582ed400775b4f2e124561ea1f0ef9 239 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 44 230 2.1E-21 T 12-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M892_03755 8c582ed400775b4f2e124561ea1f0ef9 239 SUPERFAMILY SSF53098 40 228 5.48E-37 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_03755 8c582ed400775b4f2e124561ea1f0ef9 239 SMART SM00479 48 229 4.8E-18 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III M892_03755 8c582ed400775b4f2e124561ea1f0ef9 239 Gene3D G3DSA:3.30.420.10 43 231 7.2E-35 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M892_14460 2466ea4ad0eee8d1218048ad6eff8414 386 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 122 133 - T 12-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 M892_14460 2466ea4ad0eee8d1218048ad6eff8414 386 TIGRFAM TIGR00131 gal_kin: galactokinase 6 381 8.5E-148 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 M892_14460 2466ea4ad0eee8d1218048ad6eff8414 386 SUPERFAMILY SSF54211 2 204 5.31E-65 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold M892_14460 2466ea4ad0eee8d1218048ad6eff8414 386 Pfam PF08544 GHMP kinases C terminal 280 361 1.1E-10 T 12-10-2018 IPR013750 GHMP kinase, C-terminal domain M892_14460 2466ea4ad0eee8d1218048ad6eff8414 386 PRINTS PR00473 Galactokinase signature 93 104 9.4E-30 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 M892_14460 2466ea4ad0eee8d1218048ad6eff8414 386 PRINTS PR00473 Galactokinase signature 264 278 9.4E-30 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 M892_14460 2466ea4ad0eee8d1218048ad6eff8414 386 PRINTS PR00473 Galactokinase signature 113 131 9.4E-30 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 M892_14460 2466ea4ad0eee8d1218048ad6eff8414 386 PRINTS PR00473 Galactokinase signature 28 46 9.4E-30 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 M892_14460 2466ea4ad0eee8d1218048ad6eff8414 386 SUPERFAMILY SSF55060 205 382 5.28E-53 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily M892_14460 2466ea4ad0eee8d1218048ad6eff8414 386 PRINTS PR00959 Mevalonate kinase family signature 26 50 8.1E-44 T 12-10-2018 M892_14460 2466ea4ad0eee8d1218048ad6eff8414 386 PRINTS PR00959 Mevalonate kinase family signature 120 142 8.1E-44 T 12-10-2018 M892_14460 2466ea4ad0eee8d1218048ad6eff8414 386 PRINTS PR00959 Mevalonate kinase family signature 329 346 8.1E-44 T 12-10-2018 M892_14460 2466ea4ad0eee8d1218048ad6eff8414 386 PRINTS PR00959 Mevalonate kinase family signature 163 182 8.1E-44 T 12-10-2018 M892_14460 2466ea4ad0eee8d1218048ad6eff8414 386 ProSitePatterns PS00106 Galactokinase signature. 28 39 - T 12-10-2018 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 M892_14460 2466ea4ad0eee8d1218048ad6eff8414 386 PIRSF PIRSF000530 1 385 1.8E-127 T 12-10-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 M892_14460 2466ea4ad0eee8d1218048ad6eff8414 386 Pfam PF10509 Galactokinase galactose-binding signature 11 59 5.8E-22 T 12-10-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 M892_14460 2466ea4ad0eee8d1218048ad6eff8414 386 Hamap MF_00246 Galactokinase [galK]. 26 382 44.16 T 12-10-2018 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 M892_14460 2466ea4ad0eee8d1218048ad6eff8414 386 Pfam PF00288 GHMP kinases N terminal domain 115 181 7.9E-11 T 12-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 M892_14460 2466ea4ad0eee8d1218048ad6eff8414 386 Gene3D G3DSA:3.30.70.890 203 358 1.2E-132 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily M892_14460 2466ea4ad0eee8d1218048ad6eff8414 386 Gene3D G3DSA:3.30.230.10 23 202 1.2E-132 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M892_24690 9e7c5a77ec233020c098d5265449b400 218 Gene3D G3DSA:2.30.110.10 2 217 1.1E-59 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 M892_24690 9e7c5a77ec233020c098d5265449b400 218 Pfam PF12900 Pyridoxamine 5'-phosphate oxidase 20 162 1.5E-38 T 12-10-2018 IPR024747 Pyridoxamine 5'-phosphate oxidase-related M892_24690 9e7c5a77ec233020c098d5265449b400 218 SUPERFAMILY SSF50475 2 184 8.89E-52 T 12-10-2018 M892_15275 59309df60c8a3acf9666d524b80f459b 104 Gene3D G3DSA:3.30.70.100 2 103 7.6E-9 T 12-10-2018 M892_15275 59309df60c8a3acf9666d524b80f459b 104 SUPERFAMILY SSF54909 3 97 9.12E-14 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel M892_15275 59309df60c8a3acf9666d524b80f459b 104 Pfam PF07978 NIPSNAP 5 96 4.5E-6 T 12-10-2018 IPR012577 NIPSNAP M892_13875 ca91cd39b4ac6f65c078b74986efb3f9 796 SUPERFAMILY SSF56601 349 778 1.49E-107 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like M892_13875 ca91cd39b4ac6f65c078b74986efb3f9 796 SUPERFAMILY SSF53955 193 389 1.15E-68 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily M892_13875 ca91cd39b4ac6f65c078b74986efb3f9 796 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 55 778 0.0 T 12-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 M892_13875 ca91cd39b4ac6f65c078b74986efb3f9 796 Gene3D G3DSA:1.10.3810.10 188 391 5.3E-262 T 12-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 M892_13875 ca91cd39b4ac6f65c078b74986efb3f9 796 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 200 734 8.3E-159 T 12-10-2018 M892_13875 ca91cd39b4ac6f65c078b74986efb3f9 796 Pfam PF00912 Transglycosylase 196 366 4.6E-59 T 12-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 M892_13875 ca91cd39b4ac6f65c078b74986efb3f9 796 Gene3D G3DSA:3.30.2060.10 98 187 5.3E-262 T 12-10-2018 M892_13875 ca91cd39b4ac6f65c078b74986efb3f9 796 PIRSF PIRSF002799 14 796 0.0 T 12-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 M892_13875 ca91cd39b4ac6f65c078b74986efb3f9 796 Gene3D G3DSA:3.40.710.10 90 747 5.3E-262 T 12-10-2018 M892_13875 ca91cd39b4ac6f65c078b74986efb3f9 796 Pfam PF00905 Penicillin binding protein transpeptidase domain 459 697 1.9E-23 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 M892_13875 ca91cd39b4ac6f65c078b74986efb3f9 796 Pfam PF14814 Bifunctional transglycosylase second domain 100 183 1.9E-26 T 12-10-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 M892_26035 0fe026625e203aea10a45487361726de 151 Pfam PF10772 Protein of unknown function (DUF2597) 8 141 1.8E-61 T 12-10-2018 IPR019708 Bacteriophage HP1, Orf24 M892_16635 6bbc80a215c1cc3ee60bce881dba0778 226 Gene3D G3DSA:3.40.50.300 1 226 2.8E-81 T 12-10-2018 M892_16635 6bbc80a215c1cc3ee60bce881dba0778 226 Pfam PF02224 Cytidylate kinase 8 221 3.4E-77 T 12-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 M892_16635 6bbc80a215c1cc3ee60bce881dba0778 226 Hamap MF_00238 Cytidylate kinase [cmk]. 6 224 33.789 T 12-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 M892_16635 6bbc80a215c1cc3ee60bce881dba0778 226 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 219 2.6E-84 T 12-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 M892_16635 6bbc80a215c1cc3ee60bce881dba0778 226 SUPERFAMILY SSF52540 6 223 1.18E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_18825 83403745a51e2def1e98be2fa10f95c8 249 Pfam PF00753 Metallo-beta-lactamase superfamily 2 197 1.3E-17 T 12-10-2018 IPR001279 Metallo-beta-lactamase M892_18825 83403745a51e2def1e98be2fa10f95c8 249 SUPERFAMILY SSF56281 1 215 1.22E-34 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like M892_18825 83403745a51e2def1e98be2fa10f95c8 249 SMART SM00849 1 197 4.8E-13 T 12-10-2018 IPR001279 Metallo-beta-lactamase M892_18825 83403745a51e2def1e98be2fa10f95c8 249 Gene3D G3DSA:3.60.15.10 1 219 5.6E-32 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like M892_10455 16781ebf3853ec85619dfbcdd0406dd6 723 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 317 495 3.3E-57 T 12-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 M892_10455 16781ebf3853ec85619dfbcdd0406dd6 723 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 497 593 6.3E-25 T 12-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 M892_10455 16781ebf3853ec85619dfbcdd0406dd6 723 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 628 710 1.4E-5 T 12-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 M892_10455 16781ebf3853ec85619dfbcdd0406dd6 723 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 494 518 - T 12-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 M892_10455 16781ebf3853ec85619dfbcdd0406dd6 723 SUPERFAMILY SSF52096 2 305 3.08E-66 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily M892_10455 16781ebf3853ec85619dfbcdd0406dd6 723 SUPERFAMILY SSF48179 624 715 8.08E-25 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 M892_10455 16781ebf3853ec85619dfbcdd0406dd6 723 Gene3D G3DSA:1.10.1040.50 498 710 2.8E-73 T 12-10-2018 M892_10455 16781ebf3853ec85619dfbcdd0406dd6 723 SUPERFAMILY SSF48179 496 604 1.36E-27 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 M892_10455 16781ebf3853ec85619dfbcdd0406dd6 723 Hamap MF_01621 Fatty acid oxidation complex subunit alpha [fadB]. 1 716 52.268 T 12-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 M892_10455 16781ebf3853ec85619dfbcdd0406dd6 723 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 715 0.0 T 12-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 M892_10455 16781ebf3853ec85619dfbcdd0406dd6 723 Gene3D G3DSA:3.90.226.10 1 312 3.2E-90 T 12-10-2018 M892_10455 16781ebf3853ec85619dfbcdd0406dd6 723 Gene3D G3DSA:3.40.50.720 314 497 1.5E-64 T 12-10-2018 M892_10455 16781ebf3853ec85619dfbcdd0406dd6 723 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 206 2.1E-38 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 M892_10455 16781ebf3853ec85619dfbcdd0406dd6 723 SUPERFAMILY SSF51735 313 496 5.87E-55 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_11785 906031f263f5ccf583a49c738d31b096 1143 SMART SM00388 788 853 2.4E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M892_11785 906031f263f5ccf583a49c738d31b096 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 966 984 1.3E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_11785 906031f263f5ccf583a49c738d31b096 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 933 947 1.3E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_11785 906031f263f5ccf583a49c738d31b096 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 990 1003 1.3E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_11785 906031f263f5ccf583a49c738d31b096 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 951 961 1.3E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_11785 906031f263f5ccf583a49c738d31b096 1143 SUPERFAMILY SSF47384 773 854 3.53E-14 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M892_11785 906031f263f5ccf583a49c738d31b096 1143 Gene3D G3DSA:3.40.50.2300 1013 1143 1.2E-17 T 12-10-2018 M892_11785 906031f263f5ccf583a49c738d31b096 1143 SMART SM00448 1026 1139 5.2E-16 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_11785 906031f263f5ccf583a49c738d31b096 1143 Pfam PF00072 Response regulator receiver domain 1028 1139 5.8E-12 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_11785 906031f263f5ccf583a49c738d31b096 1143 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 898 1004 4.7E-19 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_11785 906031f263f5ccf583a49c738d31b096 1143 Gene3D G3DSA:3.30.565.10 852 1007 9.8E-35 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_11785 906031f263f5ccf583a49c738d31b096 1143 Pfam PF12860 PAS fold 634 748 1.0E-43 T 12-10-2018 M892_11785 906031f263f5ccf583a49c738d31b096 1143 SUPERFAMILY SSF55785 626 741 1.74E-8 T 12-10-2018 IPR035965 PAS domain superfamily M892_11785 906031f263f5ccf583a49c738d31b096 1143 Pfam PF00512 His Kinase A (phospho-acceptor) domain 788 853 9.9E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M892_11785 906031f263f5ccf583a49c738d31b096 1143 SUPERFAMILY SSF55874 843 1002 1.44E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_11785 906031f263f5ccf583a49c738d31b096 1143 SMART SM00387 897 1006 2.5E-28 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_11785 906031f263f5ccf583a49c738d31b096 1143 Gene3D G3DSA:1.10.287.130 746 851 4.4E-15 T 12-10-2018 M892_11785 906031f263f5ccf583a49c738d31b096 1143 Gene3D G3DSA:3.30.450.20 616 745 2.7E-11 T 12-10-2018 M892_11785 906031f263f5ccf583a49c738d31b096 1143 SUPERFAMILY SSF52172 1025 1142 1.85E-19 T 12-10-2018 IPR011006 CheY-like superfamily M892_06110 0538139e79d8a4ad44d3233ae2ca9105 62 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 1 42 1.0E-15 T 12-10-2018 IPR027354 YcgL domain M892_06110 0538139e79d8a4ad44d3233ae2ca9105 62 Pfam PF05166 YcgL domain 1 43 1.2E-11 T 12-10-2018 IPR027354 YcgL domain M892_06110 0538139e79d8a4ad44d3233ae2ca9105 62 Gene3D G3DSA:3.10.510.20 1 42 1.1E-9 T 12-10-2018 IPR038068 YcgL-like superfamily M892_06110 0538139e79d8a4ad44d3233ae2ca9105 62 SUPERFAMILY SSF160191 1 60 9.15E-18 T 12-10-2018 IPR038068 YcgL-like superfamily M892_05135 07f7d4d5dad430ee925c965f740865b9 173 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 2.6E-63 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 M892_05135 07f7d4d5dad430ee925c965f740865b9 173 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 12-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 M892_05135 07f7d4d5dad430ee925c965f740865b9 173 Gene3D G3DSA:3.30.420.10 2 159 6.2E-53 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M892_05135 07f7d4d5dad430ee925c965f740865b9 173 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 47.893 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 M892_05135 07f7d4d5dad430ee925c965f740865b9 173 SUPERFAMILY SSF53098 3 156 3.54E-55 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_05135 07f7d4d5dad430ee925c965f740865b9 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 1.8E-42 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 M892_05135 07f7d4d5dad430ee925c965f740865b9 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 1.8E-42 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 M892_05135 07f7d4d5dad430ee925c965f740865b9 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 1.8E-42 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 M892_05135 07f7d4d5dad430ee925c965f740865b9 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 1.8E-42 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 M892_05135 07f7d4d5dad430ee925c965f740865b9 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 1.8E-42 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 M892_05135 07f7d4d5dad430ee925c965f740865b9 173 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 155 1.4E-74 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 M892_19705 871255fcd6f9f590afb4d471d421b8c2 98 Gene3D G3DSA:3.30.70.100 1 98 7.7E-35 T 12-10-2018 M892_19705 871255fcd6f9f590afb4d471d421b8c2 98 SMART SM00886 2 98 5.2E-32 T 12-10-2018 IPR013097 Stress responsive alpha-beta barrel M892_19705 871255fcd6f9f590afb4d471d421b8c2 98 Pfam PF07876 Stress responsive A/B Barrel Domain 2 98 3.4E-30 T 12-10-2018 IPR013097 Stress responsive alpha-beta barrel M892_19705 871255fcd6f9f590afb4d471d421b8c2 98 SUPERFAMILY SSF54909 2 98 2.83E-30 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel M892_05445 3cff6e072c8fd8f7ccec9323b09d4559 752 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 230 406 4.2E-29 T 12-10-2018 IPR004477 ComEC/Rec2-related protein M892_05445 3cff6e072c8fd8f7ccec9323b09d4559 752 Gene3D G3DSA:3.60.15.10 494 731 2.0E-46 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like M892_05445 3cff6e072c8fd8f7ccec9323b09d4559 752 Pfam PF00753 Metallo-beta-lactamase superfamily 504 670 2.5E-6 T 12-10-2018 IPR001279 Metallo-beta-lactamase M892_05445 3cff6e072c8fd8f7ccec9323b09d4559 752 Pfam PF03772 Competence protein 208 466 3.1E-53 T 12-10-2018 IPR004477 ComEC/Rec2-related protein M892_05445 3cff6e072c8fd8f7ccec9323b09d4559 752 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 133 718 3.2E-120 T 12-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 M892_05445 3cff6e072c8fd8f7ccec9323b09d4559 752 SMART SM00849 506 689 1.3E-5 T 12-10-2018 IPR001279 Metallo-beta-lactamase M892_05445 3cff6e072c8fd8f7ccec9323b09d4559 752 SUPERFAMILY SSF56281 495 740 1.31E-39 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like M892_19510 2210be738919b61141d2efc3a238001f 363 Gene3D G3DSA:3.40.190.10 324 360 3.0E-19 T 12-10-2018 M892_19510 2210be738919b61141d2efc3a238001f 363 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 32 361 1.9E-44 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M892_19510 2210be738919b61141d2efc3a238001f 363 Pfam PF00060 Ligand-gated ion channel 138 249 6.2E-9 T 12-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 M892_19510 2210be738919b61141d2efc3a238001f 363 Gene3D G3DSA:3.40.190.10 27 136 3.1E-23 T 12-10-2018 M892_19510 2210be738919b61141d2efc3a238001f 363 Gene3D G3DSA:3.40.190.10 236 323 3.0E-19 T 12-10-2018 M892_19510 2210be738919b61141d2efc3a238001f 363 SUPERFAMILY SSF53850 31 360 5.8E-46 T 12-10-2018 M892_19510 2210be738919b61141d2efc3a238001f 363 SMART SM00062 31 363 4.5E-19 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M892_25185 e3d233c8079d936af87c97c1cc9d042c 276 Pfam PF12833 Helix-turn-helix domain 196 274 7.1E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M892_25185 e3d233c8079d936af87c97c1cc9d042c 276 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 256 272 5.5E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 M892_25185 e3d233c8079d936af87c97c1cc9d042c 276 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 241 256 5.5E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 M892_25185 e3d233c8079d936af87c97c1cc9d042c 276 Pfam PF02311 AraC-like ligand binding domain 47 158 7.3E-5 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 M892_25185 e3d233c8079d936af87c97c1cc9d042c 276 Gene3D G3DSA:1.10.10.60 170 275 5.5E-23 T 12-10-2018 M892_25185 e3d233c8079d936af87c97c1cc9d042c 276 SMART SM00342 190 272 9.8E-23 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M892_25185 e3d233c8079d936af87c97c1cc9d042c 276 SUPERFAMILY SSF46689 227 274 2.62E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_25185 e3d233c8079d936af87c97c1cc9d042c 276 SUPERFAMILY SSF51182 33 199 6.52E-10 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily M892_09340 f1ea0dbe349c362f4e891722cbc72cc5 407 Gene3D G3DSA:3.40.50.2000 14 214 3.4E-21 T 12-10-2018 M892_09340 f1ea0dbe349c362f4e891722cbc72cc5 407 Gene3D G3DSA:3.40.50.2000 215 388 2.0E-24 T 12-10-2018 M892_09340 f1ea0dbe349c362f4e891722cbc72cc5 407 Pfam PF13439 Glycosyltransferase Family 4 19 204 4.8E-18 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 M892_09340 f1ea0dbe349c362f4e891722cbc72cc5 407 Pfam PF00534 Glycosyl transferases group 1 223 380 1.0E-15 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 M892_09340 f1ea0dbe349c362f4e891722cbc72cc5 407 SUPERFAMILY SSF53756 3 403 3.95E-50 T 12-10-2018 M892_15015 211e03332a94a322e2c91ff7491744c2 154 Pfam PF00075 RNase H 3 141 1.3E-52 T 12-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 M892_15015 211e03332a94a322e2c91ff7491744c2 154 Gene3D G3DSA:3.30.420.10 1 154 1.4E-59 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M892_15015 211e03332a94a322e2c91ff7491744c2 154 SUPERFAMILY SSF53098 3 143 1.64E-57 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_15015 211e03332a94a322e2c91ff7491744c2 154 Hamap MF_00042 Ribonuclease H [rnhA]. 2 149 36.348 T 12-10-2018 IPR022892 Ribonuclease HI GO:0004523 M892_14340 96b12b9fbd2eda1e7a3f981c0ca62a53 411 SUPERFAMILY SSF52540 152 378 6.91E-16 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_14340 96b12b9fbd2eda1e7a3f981c0ca62a53 411 Gene3D G3DSA:3.40.50.300 151 389 3.8E-17 T 12-10-2018 M892_16580 0d4307c91f5d2c94637089b038f77625 518 Gene3D G3DSA:2.40.33.10 112 210 4.0E-152 T 12-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M892_16580 0d4307c91f5d2c94637089b038f77625 518 Pfam PF02887 Pyruvate kinase, alpha/beta domain 401 516 7.2E-28 T 12-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M892_16580 0d4307c91f5d2c94637089b038f77625 518 PRINTS PR01050 Pyruvate kinase family signature 288 312 4.5E-52 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M892_16580 0d4307c91f5d2c94637089b038f77625 518 PRINTS PR01050 Pyruvate kinase family signature 101 117 4.5E-52 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M892_16580 0d4307c91f5d2c94637089b038f77625 518 PRINTS PR01050 Pyruvate kinase family signature 228 242 4.5E-52 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M892_16580 0d4307c91f5d2c94637089b038f77625 518 PRINTS PR01050 Pyruvate kinase family signature 313 337 4.5E-52 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M892_16580 0d4307c91f5d2c94637089b038f77625 518 PRINTS PR01050 Pyruvate kinase family signature 338 356 4.5E-52 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M892_16580 0d4307c91f5d2c94637089b038f77625 518 PRINTS PR01050 Pyruvate kinase family signature 357 373 4.5E-52 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M892_16580 0d4307c91f5d2c94637089b038f77625 518 PRINTS PR01050 Pyruvate kinase family signature 261 287 4.5E-52 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M892_16580 0d4307c91f5d2c94637089b038f77625 518 ProSitePatterns PS00110 Pyruvate kinase active site signature. 256 268 - T 12-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M892_16580 0d4307c91f5d2c94637089b038f77625 518 Gene3D G3DSA:3.20.20.60 44 379 4.0E-152 T 12-10-2018 M892_16580 0d4307c91f5d2c94637089b038f77625 518 Pfam PF00224 Pyruvate kinase, barrel domain 44 383 1.4E-129 T 12-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M892_16580 0d4307c91f5d2c94637089b038f77625 518 Gene3D G3DSA:3.40.1380.20 380 514 4.0E-152 T 12-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M892_16580 0d4307c91f5d2c94637089b038f77625 518 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 44 516 4.9E-166 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M892_16580 0d4307c91f5d2c94637089b038f77625 518 SUPERFAMILY SSF51621 42 382 7.85E-84 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 M892_16580 0d4307c91f5d2c94637089b038f77625 518 SUPERFAMILY SSF50800 112 207 7.85E-27 T 12-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily M892_16580 0d4307c91f5d2c94637089b038f77625 518 SUPERFAMILY SSF52935 367 516 2.35E-36 T 12-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M892_10225 24688992e77920035318f47ed8cd7de8 203 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 5 202 3.2E-83 T 12-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 M892_10225 24688992e77920035318f47ed8cd7de8 203 Gene3D G3DSA:3.20.20.70 1 203 6.0E-74 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M892_10225 24688992e77920035318f47ed8cd7de8 203 SUPERFAMILY SSF51569 3 201 1.34E-66 T 12-10-2018 M892_10225 24688992e77920035318f47ed8cd7de8 203 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 36 45 - T 12-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 M892_10225 24688992e77920035318f47ed8cd7de8 203 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 124 137 - T 12-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 M892_10225 24688992e77920035318f47ed8cd7de8 203 Pfam PF01081 KDPG and KHG aldolase 5 197 7.7E-74 T 12-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 M892_01415 2692178d2c91fd1f9f9db5fa2d457075 840 Gene3D G3DSA:1.10.3210.10 552 662 3.1E-20 T 12-10-2018 M892_01415 2692178d2c91fd1f9f9db5fa2d457075 840 Pfam PF01966 HD domain 578 656 1.2E-4 T 12-10-2018 IPR006674 HD domain M892_01415 2692178d2c91fd1f9f9db5fa2d457075 840 SMART SM00062 190 408 6.5E-6 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M892_01415 2692178d2c91fd1f9f9db5fa2d457075 840 Gene3D G3DSA:3.40.190.10 186 404 9.3E-37 T 12-10-2018 M892_01415 2692178d2c91fd1f9f9db5fa2d457075 840 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 196 406 1.5E-20 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M892_01415 2692178d2c91fd1f9f9db5fa2d457075 840 SUPERFAMILY SSF109604 568 672 2.34E-9 T 12-10-2018 M892_01415 2692178d2c91fd1f9f9db5fa2d457075 840 SUPERFAMILY SSF53850 192 407 2.39E-29 T 12-10-2018 M892_01415 2692178d2c91fd1f9f9db5fa2d457075 840 Gene3D G3DSA:3.40.190.10 273 367 9.3E-37 T 12-10-2018 M892_09130 fa2b6ea283a1d2ae93ee95c140b5adcb 58 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 58 9.1E-27 T 12-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_09130 fa2b6ea283a1d2ae93ee95c140b5adcb 58 ProSitePatterns PS00634 Ribosomal protein L30 signature. 22 54 - T 12-10-2018 IPR018038 Ribosomal protein L30, conserved site M892_09130 fa2b6ea283a1d2ae93ee95c140b5adcb 58 PIRSF PIRSF002211 1 58 1.3E-28 T 12-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_09130 fa2b6ea283a1d2ae93ee95c140b5adcb 58 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 22.06 T 12-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_09130 fa2b6ea283a1d2ae93ee95c140b5adcb 58 Gene3D G3DSA:3.30.1390.20 1 58 3.6E-28 T 12-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily M892_09130 fa2b6ea283a1d2ae93ee95c140b5adcb 58 SUPERFAMILY SSF55129 1 58 1.83E-23 T 12-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily M892_09130 fa2b6ea283a1d2ae93ee95c140b5adcb 58 Pfam PF00327 Ribosomal protein L30p/L7e 4 54 2.6E-21 T 12-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain M892_20080 4690cbec387565950d4cc7ef8133b92c 389 Gene3D G3DSA:3.40.710.10 14 278 7.1E-89 T 12-10-2018 M892_20080 4690cbec387565950d4cc7ef8133b92c 389 SUPERFAMILY SSF69189 280 372 1.04E-25 T 12-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 M892_20080 4690cbec387565950d4cc7ef8133b92c 389 SUPERFAMILY SSF56601 11 280 4.64E-84 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like M892_20080 4690cbec387565950d4cc7ef8133b92c 389 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 30 260 3.1E-83 T 12-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 M892_20080 4690cbec387565950d4cc7ef8133b92c 389 Gene3D G3DSA:2.60.410.10 280 370 2.6E-28 T 12-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 M892_20080 4690cbec387565950d4cc7ef8133b92c 389 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 280 369 3.4E-24 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 M892_20080 4690cbec387565950d4cc7ef8133b92c 389 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 119 136 8.0E-18 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 M892_20080 4690cbec387565950d4cc7ef8133b92c 389 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 146 159 8.0E-18 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 M892_20080 4690cbec387565950d4cc7ef8133b92c 389 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 63 74 8.0E-18 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 M892_20080 4690cbec387565950d4cc7ef8133b92c 389 SMART SM00936 280 370 3.6E-31 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 M892_27465 cde18bd9d3997b1864bd8a712685ecb5 158 Gene3D G3DSA:3.30.70.920 57 151 5.2E-26 T 12-10-2018 M892_27465 cde18bd9d3997b1864bd8a712685ecb5 158 Gene3D G3DSA:1.10.10.10 1 56 2.6E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_27465 cde18bd9d3997b1864bd8a712685ecb5 158 SMART SM00344 5 114 1.0E-44 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 M892_27465 cde18bd9d3997b1864bd8a712685ecb5 158 ProSitePatterns PS00519 AsnC-type HTH domain signature. 23 49 - T 12-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site M892_27465 cde18bd9d3997b1864bd8a712685ecb5 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 5 21 2.1E-15 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 M892_27465 cde18bd9d3997b1864bd8a712685ecb5 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 21 32 2.1E-15 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 M892_27465 cde18bd9d3997b1864bd8a712685ecb5 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 32 51 2.1E-15 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 M892_27465 cde18bd9d3997b1864bd8a712685ecb5 158 Pfam PF01037 Lrp/AsnC ligand binding domain 71 145 4.0E-22 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain M892_27465 cde18bd9d3997b1864bd8a712685ecb5 158 SUPERFAMILY SSF46785 3 64 3.5E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_27465 cde18bd9d3997b1864bd8a712685ecb5 158 SUPERFAMILY SSF54909 65 150 1.74E-20 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel M892_27465 cde18bd9d3997b1864bd8a712685ecb5 158 Pfam PF13412 Winged helix-turn-helix DNA-binding 5 51 5.6E-17 T 12-10-2018 M892_12865 2222bb6bfea8f7b7ff2fbc2bba7353f5 287 Gene3D G3DSA:3.40.50.300 1 167 5.2E-5 T 12-10-2018 M892_12865 2222bb6bfea8f7b7ff2fbc2bba7353f5 287 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 283 39.34 T 12-10-2018 IPR005337 RapZ-like family GO:0005524 M892_12865 2222bb6bfea8f7b7ff2fbc2bba7353f5 287 Pfam PF03668 P-loop ATPase protein family 1 284 3.1E-109 T 12-10-2018 IPR005337 RapZ-like family GO:0005524 M892_12865 2222bb6bfea8f7b7ff2fbc2bba7353f5 287 SUPERFAMILY SSF52540 2 151 1.39E-11 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_12865 2222bb6bfea8f7b7ff2fbc2bba7353f5 287 PIRSF PIRSF005052 1 286 2.4E-104 T 12-10-2018 IPR005337 RapZ-like family GO:0005524 M892_07290 3cfd3906309a483c290c0e0a7f83b2f2 554 PIRSF PIRSF003128 1 554 1.1E-162 T 12-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 M892_07290 3cfd3906309a483c290c0e0a7f83b2f2 554 SUPERFAMILY SSF52540 1 515 1.86E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_07290 3cfd3906309a483c290c0e0a7f83b2f2 554 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 551 1.3E-173 T 12-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 M892_07290 3cfd3906309a483c290c0e0a7f83b2f2 554 Gene3D G3DSA:3.40.50.300 247 553 1.0E-52 T 12-10-2018 M892_07290 3cfd3906309a483c290c0e0a7f83b2f2 554 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 507 4.2E-17 T 12-10-2018 IPR003395 RecF/RecN/SMC, N-terminal M892_07290 3cfd3906309a483c290c0e0a7f83b2f2 554 Gene3D G3DSA:3.40.50.300 1 210 4.5E-43 T 12-10-2018 M892_26180 f3bf53867b1f2ed91d863fdb8cbdf64c 360 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 20 359 60.912 T 12-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 M892_26180 f3bf53867b1f2ed91d863fdb8cbdf64c 360 Pfam PF00107 Zinc-binding dehydrogenase 193 320 7.0E-28 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 M892_26180 f3bf53867b1f2ed91d863fdb8cbdf64c 360 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 81 95 - T 12-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 M892_26180 f3bf53867b1f2ed91d863fdb8cbdf64c 360 Gene3D G3DSA:3.90.180.10 39 347 3.8E-119 T 12-10-2018 M892_26180 f3bf53867b1f2ed91d863fdb8cbdf64c 360 Gene3D G3DSA:3.40.50.720 172 305 3.8E-119 T 12-10-2018 M892_26180 f3bf53867b1f2ed91d863fdb8cbdf64c 360 SUPERFAMILY SSF50129 19 192 2.13E-53 T 12-10-2018 IPR011032 GroES-like superfamily M892_26180 f3bf53867b1f2ed91d863fdb8cbdf64c 360 SUPERFAMILY SSF51735 160 324 8.57E-37 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_26180 f3bf53867b1f2ed91d863fdb8cbdf64c 360 SMART SM00829 31 357 5.8E-5 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 M892_26180 f3bf53867b1f2ed91d863fdb8cbdf64c 360 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 45 153 2.8E-32 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 M892_26180 f3bf53867b1f2ed91d863fdb8cbdf64c 360 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 22 359 6.8E-181 T 12-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 M892_20590 f1adfdb5b0168ad87bcaa51d5b984ad8 261 SMART SM00382 26 215 8.6E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_20590 f1adfdb5b0168ad87bcaa51d5b984ad8 261 Pfam PF00005 ABC transporter 21 166 4.6E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_20590 f1adfdb5b0168ad87bcaa51d5b984ad8 261 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_20590 f1adfdb5b0168ad87bcaa51d5b984ad8 261 Gene3D G3DSA:3.40.50.300 1 253 2.9E-60 T 12-10-2018 M892_20590 f1adfdb5b0168ad87bcaa51d5b984ad8 261 SUPERFAMILY SSF52540 3 230 2.38E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_06630 8a4ed3ff3f9a25b2ffb4985cb7a6c03c 377 Pfam PF16539 Flagellar assembly protein T, middle domain 115 256 6.1E-42 T 12-10-2018 IPR032386 Flagellar assembly protein T, middle domain M892_06630 8a4ed3ff3f9a25b2ffb4985cb7a6c03c 377 Gene3D G3DSA:3.30.1660.40 24 113 2.3E-36 T 12-10-2018 IPR038180 FlgT, N-terminal domain superfamily M892_06630 8a4ed3ff3f9a25b2ffb4985cb7a6c03c 377 Gene3D G3DSA:3.40.50.10610 114 290 2.1E-56 T 12-10-2018 M892_06630 8a4ed3ff3f9a25b2ffb4985cb7a6c03c 377 Pfam PF16538 Flagellar assembly protein T, C-terminal domain 299 374 2.0E-27 T 12-10-2018 IPR032388 Flagellar assembly protein T, C-terminal M892_06630 8a4ed3ff3f9a25b2ffb4985cb7a6c03c 377 Gene3D G3DSA:2.40.10.410 291 377 4.8E-37 T 12-10-2018 IPR038165 FlgT, C-terminal domain superfamily M892_06630 8a4ed3ff3f9a25b2ffb4985cb7a6c03c 377 Pfam PF16548 Flagellar assembly protein T, N-terminal domain 24 110 6.2E-26 T 12-10-2018 IPR032370 Flagellar assembly protein T, N-terminal M892_23695 7aac869046df49ef8cff7fdd0a63bb58 650 Pfam PF13176 Tetratricopeptide repeat 210 235 5.3E-4 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_23695 7aac869046df49ef8cff7fdd0a63bb58 650 Pfam PF13181 Tetratricopeptide repeat 254 281 0.12 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_23695 7aac869046df49ef8cff7fdd0a63bb58 650 SMART SM00267 474 647 1.9E-48 T 12-10-2018 IPR000160 GGDEF domain M892_23695 7aac869046df49ef8cff7fdd0a63bb58 650 SMART SM00028 208 243 13.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_23695 7aac869046df49ef8cff7fdd0a63bb58 650 SMART SM00028 252 285 43.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_23695 7aac869046df49ef8cff7fdd0a63bb58 650 SMART SM00028 332 365 33.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_23695 7aac869046df49ef8cff7fdd0a63bb58 650 SMART SM00028 374 407 140.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_23695 7aac869046df49ef8cff7fdd0a63bb58 650 SUPERFAMILY SSF48452 254 409 6.45E-14 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_23695 7aac869046df49ef8cff7fdd0a63bb58 650 SUPERFAMILY SSF55073 490 648 2.35E-38 T 12-10-2018 IPR029787 Nucleotide cyclase M892_23695 7aac869046df49ef8cff7fdd0a63bb58 650 Pfam PF00990 Diguanylate cyclase, GGDEF domain 486 643 1.9E-36 T 12-10-2018 IPR000160 GGDEF domain M892_23695 7aac869046df49ef8cff7fdd0a63bb58 650 Gene3D G3DSA:1.25.40.10 238 464 2.8E-18 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_23695 7aac869046df49ef8cff7fdd0a63bb58 650 SUPERFAMILY SSF48452 163 281 9.32E-11 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_23695 7aac869046df49ef8cff7fdd0a63bb58 650 Gene3D G3DSA:3.30.70.270 478 649 5.7E-48 T 12-10-2018 M892_23695 7aac869046df49ef8cff7fdd0a63bb58 650 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 481 646 5.3E-42 T 12-10-2018 IPR000160 GGDEF domain M892_23695 7aac869046df49ef8cff7fdd0a63bb58 650 Gene3D G3DSA:1.25.40.10 128 237 2.2E-12 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_09740 3709234c18d0fe9ef0bb3e3eb3b40678 627 SUPERFAMILY SSF50630 492 618 5.94E-33 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily M892_09740 3709234c18d0fe9ef0bb3e3eb3b40678 627 Gene3D G3DSA:2.40.70.10 110 203 1.7E-9 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily M892_09740 3709234c18d0fe9ef0bb3e3eb3b40678 627 Gene3D G3DSA:2.40.70.10 216 333 1.8E-5 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily M892_09740 3709234c18d0fe9ef0bb3e3eb3b40678 627 Gene3D G3DSA:2.40.70.10 490 612 3.8E-33 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily M892_09740 3709234c18d0fe9ef0bb3e3eb3b40678 627 SUPERFAMILY SSF50630 42 211 1.35E-22 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily M892_09740 3709234c18d0fe9ef0bb3e3eb3b40678 627 Pfam PF05618 Putative ATP-dependant zinc protease 500 620 9.0E-25 T 12-10-2018 M892_09740 3709234c18d0fe9ef0bb3e3eb3b40678 627 SUPERFAMILY SSF50630 357 483 5.51E-11 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily M892_09740 3709234c18d0fe9ef0bb3e3eb3b40678 627 SUPERFAMILY SSF50630 219 340 5.38E-18 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily M892_09715 cc6953555a9cce5e3c6854358467f4a3 463 TIGRFAM TIGR03173 pbuX: xanthine permease 27 446 2.2E-130 T 12-10-2018 IPR017588 Uric acid permease UacT-like GO:0016021|GO:0022857|GO:0055085 M892_09715 cc6953555a9cce5e3c6854358467f4a3 463 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 362 382 - T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 M892_09715 cc6953555a9cce5e3c6854358467f4a3 463 Pfam PF00860 Permease family 22 414 3.5E-96 T 12-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 M892_09715 cc6953555a9cce5e3c6854358467f4a3 463 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 17 444 3.5E-125 T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 M892_11700 72bbe202cab55f870e783b21e18628da 246 Pfam PF08483 IstB-like ATP binding N-terminal 23 50 4.1E-10 T 12-10-2018 IPR013690 IstB-like ATP binding N-terminal M892_11700 72bbe202cab55f870e783b21e18628da 246 SMART SM00382 97 228 0.0061 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_11700 72bbe202cab55f870e783b21e18628da 246 SUPERFAMILY SSF52540 71 241 3.54E-19 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_11700 72bbe202cab55f870e783b21e18628da 246 Pfam PF01695 IstB-like ATP binding protein 54 229 2.3E-55 T 12-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 M892_11700 72bbe202cab55f870e783b21e18628da 246 PIRSF PIRSF003073 1 246 1.5E-62 T 12-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein M892_11700 72bbe202cab55f870e783b21e18628da 246 Gene3D G3DSA:3.40.50.300 60 243 3.2E-43 T 12-10-2018 M892_17865 72bbe202cab55f870e783b21e18628da 246 Pfam PF08483 IstB-like ATP binding N-terminal 23 50 4.1E-10 T 12-10-2018 IPR013690 IstB-like ATP binding N-terminal M892_17865 72bbe202cab55f870e783b21e18628da 246 SMART SM00382 97 228 0.0061 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_17865 72bbe202cab55f870e783b21e18628da 246 SUPERFAMILY SSF52540 71 241 3.54E-19 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_17865 72bbe202cab55f870e783b21e18628da 246 Pfam PF01695 IstB-like ATP binding protein 54 229 2.3E-55 T 12-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 M892_17865 72bbe202cab55f870e783b21e18628da 246 PIRSF PIRSF003073 1 246 1.5E-62 T 12-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein M892_17865 72bbe202cab55f870e783b21e18628da 246 Gene3D G3DSA:3.40.50.300 60 243 3.2E-43 T 12-10-2018 M892_27695 39500a32a69986e334d23812e15c916a 672 Pfam PF08351 Domain of unknown function (DUF1726) 69 118 2.1E-5 T 12-10-2018 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal Reactome: R-HSA-6790901 M892_27695 39500a32a69986e334d23812e15c916a 672 Hamap MF_01886 tRNA(Met) cytidine acetyltransferase TmcA [tmcA]. 19 670 39.174 T 12-10-2018 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA GO:0000049|GO:0002101|GO:0051391|GO:0051392 M892_27695 39500a32a69986e334d23812e15c916a 672 Pfam PF05127 Helicase 176 343 1.4E-57 T 12-10-2018 IPR007807 Helicase domain Reactome: R-HSA-6790901 M892_27695 39500a32a69986e334d23812e15c916a 672 Pfam PF13718 GNAT acetyltransferase 2 378 490 1.1E-19 T 12-10-2018 IPR000182 GNAT domain M892_27695 39500a32a69986e334d23812e15c916a 672 SUPERFAMILY SSF55729 382 539 4.71E-12 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_27695 39500a32a69986e334d23812e15c916a 672 Gene3D G3DSA:3.40.50.11040 3 174 7.5E-18 T 12-10-2018 M892_27695 39500a32a69986e334d23812e15c916a 672 SUPERFAMILY SSF52540 131 286 3.52E-14 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_27695 39500a32a69986e334d23812e15c916a 672 Gene3D G3DSA:3.40.630.30 336 540 6.8E-66 T 12-10-2018 M892_27695 39500a32a69986e334d23812e15c916a 672 Gene3D G3DSA:3.40.50.12320 175 333 2.8E-46 T 12-10-2018 M892_17170 03a644137bd7566c8b3452fb1e11e47d 377 PIRSF PIRSF038941 1 372 1.5E-125 T 12-10-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 M892_17170 03a644137bd7566c8b3452fb1e11e47d 377 SUPERFAMILY SSF50621 212 359 3.77E-22 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 M892_17170 03a644137bd7566c8b3452fb1e11e47d 377 TIGRFAM TIGR01047 nspC: carboxynorspermidine decarboxylase 6 370 1.5E-160 T 12-10-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 M892_17170 03a644137bd7566c8b3452fb1e11e47d 377 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 243 327 2.9E-4 T 12-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 M892_17170 03a644137bd7566c8b3452fb1e11e47d 377 Gene3D G3DSA:2.40.37.10 7 372 4.7E-141 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 M892_17170 03a644137bd7566c8b3452fb1e11e47d 377 SUPERFAMILY SSF51419 14 242 6.32E-42 T 12-10-2018 IPR029066 PLP-binding barrel M892_17170 03a644137bd7566c8b3452fb1e11e47d 377 Gene3D G3DSA:3.20.20.10 15 242 4.7E-141 T 12-10-2018 IPR029066 PLP-binding barrel M892_03650 c07e04ca874ea3d8d2a02d99e09c3764 186 Gene3D G3DSA:3.90.1520.10 1 185 2.1E-55 T 12-10-2018 IPR038158 H-NOX domain superfamily GO:0020037 KEGG: 00230+4.6.1.2|Reactome: R-HSA-392154 M892_03650 c07e04ca874ea3d8d2a02d99e09c3764 186 SUPERFAMILY SSF111126 1 183 4.18E-49 T 12-10-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily M892_03650 c07e04ca874ea3d8d2a02d99e09c3764 186 Pfam PF07700 Haem-NO-binding 2 169 5.1E-38 T 12-10-2018 IPR011644 Heme NO-binding GO:0020037 KEGG: 00230+4.6.1.2|Reactome: R-HSA-392154 M892_25655 f910ac14d21186153905e9e0dfdd2656 236 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 51.754 T 12-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 M892_25655 f910ac14d21186153905e9e0dfdd2656 236 Gene3D G3DSA:3.40.50.1580 1 236 4.1E-76 T 12-10-2018 M892_25655 f910ac14d21186153905e9e0dfdd2656 236 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 233 3.7E-111 T 12-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 M892_25655 f910ac14d21186153905e9e0dfdd2656 236 SUPERFAMILY SSF53167 3 234 2.62E-91 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 M892_25655 f910ac14d21186153905e9e0dfdd2656 236 Pfam PF01048 Phosphorylase superfamily 17 222 1.2E-35 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 M892_18875 553addbbf8cadaca5ec27112c76e84bb 463 Gene3D G3DSA:3.20.20.80 1 460 2.1E-148 T 12-10-2018 M892_18875 553addbbf8cadaca5ec27112c76e84bb 463 PRINTS PR00131 Glycosyl hydrolase family 1 signature 292 306 2.8E-14 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 M892_18875 553addbbf8cadaca5ec27112c76e84bb 463 PRINTS PR00131 Glycosyl hydrolase family 1 signature 398 415 2.8E-14 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 M892_18875 553addbbf8cadaca5ec27112c76e84bb 463 PRINTS PR00131 Glycosyl hydrolase family 1 signature 423 435 2.8E-14 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 M892_18875 553addbbf8cadaca5ec27112c76e84bb 463 PRINTS PR00131 Glycosyl hydrolase family 1 signature 377 388 2.8E-14 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 M892_18875 553addbbf8cadaca5ec27112c76e84bb 463 PRINTS PR00131 Glycosyl hydrolase family 1 signature 356 364 2.8E-14 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 M892_18875 553addbbf8cadaca5ec27112c76e84bb 463 Pfam PF00232 Glycosyl hydrolase family 1 3 457 2.9E-145 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 M892_18875 553addbbf8cadaca5ec27112c76e84bb 463 SUPERFAMILY SSF51445 2 455 7.86E-156 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily M892_18875 553addbbf8cadaca5ec27112c76e84bb 463 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 8 22 - T 12-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site M892_18875 553addbbf8cadaca5ec27112c76e84bb 463 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 356 364 - T 12-10-2018 IPR018120 Glycoside hydrolase family 1, active site M892_12395 79243eb23a1612eff150e3c2c410f256 201 Pfam PF10400 Virulence activator alpha C-term 114 198 5.4E-16 T 12-10-2018 IPR018309 Transcription regulator PadR, C-terminal M892_12395 79243eb23a1612eff150e3c2c410f256 201 SUPERFAMILY SSF46785 25 198 6.04E-45 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_12395 79243eb23a1612eff150e3c2c410f256 201 Gene3D G3DSA:1.10.10.10 23 111 8.5E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_12395 79243eb23a1612eff150e3c2c410f256 201 Pfam PF03551 Transcriptional regulator PadR-like family 29 102 1.4E-15 T 12-10-2018 IPR005149 Transcription regulator PadR, N-terminal M892_07495 ba2d9e55d7762d99e20872eb0b034d4d 181 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 81 175 2.9E-42 T 12-10-2018 IPR012997 Rare lipoprotein A M892_07495 ba2d9e55d7762d99e20872eb0b034d4d 181 Gene3D G3DSA:2.40.40.10 79 172 3.5E-40 T 12-10-2018 IPR036908 RlpA-like domain superfamily M892_07495 ba2d9e55d7762d99e20872eb0b034d4d 181 SUPERFAMILY SSF50685 83 171 1.26E-17 T 12-10-2018 IPR036908 RlpA-like domain superfamily M892_07495 ba2d9e55d7762d99e20872eb0b034d4d 181 Pfam PF03330 Lytic transglycolase 80 168 3.0E-29 T 12-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain M892_07495 ba2d9e55d7762d99e20872eb0b034d4d 181 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 8 171 22.728 T 12-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 M892_14025 2d26cda0d630b34fb9b7e34ad0bbd9d6 395 SMART SM00363 334 393 0.0078 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_14025 2d26cda0d630b34fb9b7e34ad0bbd9d6 395 SUPERFAMILY SSF55174 297 394 9.57E-16 T 12-10-2018 M892_14025 2d26cda0d630b34fb9b7e34ad0bbd9d6 395 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 2 394 48.277 T 12-10-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 M892_14025 2d26cda0d630b34fb9b7e34ad0bbd9d6 395 Gene3D G3DSA:3.40.50.620 5 217 7.7E-73 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M892_14025 2d26cda0d630b34fb9b7e34ad0bbd9d6 395 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 M892_14025 2d26cda0d630b34fb9b7e34ad0bbd9d6 395 Gene3D G3DSA:1.10.240.10 218 325 9.6E-34 T 12-10-2018 M892_14025 2d26cda0d630b34fb9b7e34ad0bbd9d6 395 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 4 395 2.3E-125 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 M892_14025 2d26cda0d630b34fb9b7e34ad0bbd9d6 395 SUPERFAMILY SSF52374 6 316 5.63E-98 T 12-10-2018 M892_14025 2d26cda0d630b34fb9b7e34ad0bbd9d6 395 Gene3D G3DSA:3.10.290.10 326 394 3.3E-15 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 M892_14025 2d26cda0d630b34fb9b7e34ad0bbd9d6 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 1.3E-24 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 M892_14025 2d26cda0d630b34fb9b7e34ad0bbd9d6 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 1.3E-24 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 M892_14025 2d26cda0d630b34fb9b7e34ad0bbd9d6 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 178 200 1.3E-24 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 M892_14025 2d26cda0d630b34fb9b7e34ad0bbd9d6 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 211 223 1.3E-24 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 M892_14025 2d26cda0d630b34fb9b7e34ad0bbd9d6 395 Pfam PF00579 tRNA synthetases class I (W and Y) 30 316 8.8E-79 T 12-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 M892_26735 aa8319f028f15c309fd715b76d9a3191 574 Gene3D G3DSA:1.10.3720.10 28 291 1.1E-48 T 12-10-2018 IPR035906 MetI-like superfamily M892_26735 aa8319f028f15c309fd715b76d9a3191 574 Gene3D G3DSA:1.10.3720.10 310 564 1.5E-29 T 12-10-2018 IPR035906 MetI-like superfamily M892_26735 aa8319f028f15c309fd715b76d9a3191 574 SUPERFAMILY SSF161098 308 558 7.59E-33 T 12-10-2018 IPR035906 MetI-like superfamily M892_26735 aa8319f028f15c309fd715b76d9a3191 574 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 393 558 2.6E-8 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M892_26735 aa8319f028f15c309fd715b76d9a3191 574 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 287 2.5E-10 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M892_26735 aa8319f028f15c309fd715b76d9a3191 574 TIGRFAM TIGR03262 PhnU2: putative 2-aminoethylphosphonate ABC transporter, permease protein 32 574 1.0E-256 T 12-10-2018 IPR017664 2-aminoethylphosphonate ABC transport system, permease protein, putative M892_26735 aa8319f028f15c309fd715b76d9a3191 574 SUPERFAMILY SSF161098 31 284 1.31E-42 T 12-10-2018 IPR035906 MetI-like superfamily M892_22495 3b4de66950a47708f32fa49a9e265aa1 638 Pfam PF17152 Periplasmic sensor domain 45 110 7.0E-10 T 12-10-2018 IPR033417 Periplasmic sensor domain CHASE8 M892_22495 3b4de66950a47708f32fa49a9e265aa1 638 SMART SM00304 180 233 0.0013 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M892_22495 3b4de66950a47708f32fa49a9e265aa1 638 Gene3D G3DSA:3.30.70.270 472 636 3.8E-50 T 12-10-2018 M892_22495 3b4de66950a47708f32fa49a9e265aa1 638 Gene3D G3DSA:1.20.1480.50 141 240 2.6E-5 T 12-10-2018 M892_22495 3b4de66950a47708f32fa49a9e265aa1 638 SMART SM00267 467 633 5.1E-49 T 12-10-2018 IPR000160 GGDEF domain M892_22495 3b4de66950a47708f32fa49a9e265aa1 638 Pfam PF00990 Diguanylate cyclase, GGDEF domain 478 629 7.6E-41 T 12-10-2018 IPR000160 GGDEF domain M892_22495 3b4de66950a47708f32fa49a9e265aa1 638 SUPERFAMILY SSF55073 483 631 3.92E-40 T 12-10-2018 IPR029787 Nucleotide cyclase M892_22495 3b4de66950a47708f32fa49a9e265aa1 638 Gene3D G3DSA:3.30.450.20 355 468 2.2E-8 T 12-10-2018 M892_22495 3b4de66950a47708f32fa49a9e265aa1 638 SUPERFAMILY SSF55785 351 466 6.07E-8 T 12-10-2018 IPR035965 PAS domain superfamily M892_22495 3b4de66950a47708f32fa49a9e265aa1 638 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 474 630 4.6E-34 T 12-10-2018 IPR000160 GGDEF domain M892_12320 fe933c8a0c793305c7e3ee01fc80e441 91 SUPERFAMILY SSF75169 1 90 6.48E-23 T 12-10-2018 IPR027396 DsrEFH-like M892_12320 fe933c8a0c793305c7e3ee01fc80e441 91 Pfam PF04077 DsrH like protein 10 86 3.1E-23 T 12-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 M892_12320 fe933c8a0c793305c7e3ee01fc80e441 91 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 3 90 1.4E-25 T 12-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 M892_12320 fe933c8a0c793305c7e3ee01fc80e441 91 Gene3D G3DSA:3.40.1260.10 1 90 5.9E-26 T 12-10-2018 IPR027396 DsrEFH-like M892_13090 6b87bde6f309a58e90c286a1f9720a9d 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.4E-5 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M892_13090 6b87bde6f309a58e90c286a1f9720a9d 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.4E-5 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M892_13090 6b87bde6f309a58e90c286a1f9720a9d 332 Gene3D G3DSA:3.40.50.2300 160 289 3.8E-65 T 12-10-2018 M892_13090 6b87bde6f309a58e90c286a1f9720a9d 332 Pfam PF13377 Periplasmic binding protein-like domain 168 325 7.3E-29 T 12-10-2018 M892_13090 6b87bde6f309a58e90c286a1f9720a9d 332 Gene3D G3DSA:1.10.260.40 1 54 1.9E-22 T 12-10-2018 M892_13090 6b87bde6f309a58e90c286a1f9720a9d 332 Gene3D G3DSA:3.40.50.2300 55 305 3.8E-65 T 12-10-2018 M892_13090 6b87bde6f309a58e90c286a1f9720a9d 332 SUPERFAMILY SSF53822 61 326 2.57E-67 T 12-10-2018 IPR028082 Periplasmic binding protein-like I M892_13090 6b87bde6f309a58e90c286a1f9720a9d 332 SMART SM00354 1 71 4.3E-31 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M892_13090 6b87bde6f309a58e90c286a1f9720a9d 332 SUPERFAMILY SSF47413 2 59 2.59E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 M892_13090 6b87bde6f309a58e90c286a1f9720a9d 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 3.6E-19 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M892_15060 f4176e67df3bdac24679b654ffd1a996 212 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 2 191 2.1E-79 T 12-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 M892_15060 f4176e67df3bdac24679b654ffd1a996 212 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 31.668 T 12-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 M892_15060 f4176e67df3bdac24679b654ffd1a996 212 Gene3D G3DSA:3.40.50.170 2 212 3.9E-86 T 12-10-2018 M892_15060 f4176e67df3bdac24679b654ffd1a996 212 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 134 157 - T 12-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 M892_15060 f4176e67df3bdac24679b654ffd1a996 212 SUPERFAMILY SSF53328 2 201 6.15E-68 T 12-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 M892_15060 f4176e67df3bdac24679b654ffd1a996 212 Pfam PF00551 Formyl transferase 2 181 1.8E-65 T 12-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 M892_06185 d2285a999fe88b23118704f8a372c457 577 SUPERFAMILY SSF55190 2 96 3.4E-22 T 12-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 M892_06185 d2285a999fe88b23118704f8a372c457 577 SUPERFAMILY SSF47323 455 577 1.77E-35 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 M892_06185 d2285a999fe88b23118704f8a372c457 577 Pfam PF00750 tRNA synthetases class I (R) 98 447 2.8E-162 T 12-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 M892_06185 d2285a999fe88b23118704f8a372c457 577 Gene3D G3DSA:3.40.50.620 108 454 1.7E-108 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M892_06185 d2285a999fe88b23118704f8a372c457 577 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 3 577 6.6E-200 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 M892_06185 d2285a999fe88b23118704f8a372c457 577 Gene3D G3DSA:1.10.730.10 455 577 1.0E-35 T 12-10-2018 M892_06185 d2285a999fe88b23118704f8a372c457 577 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 7 87 2.8E-20 T 12-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 M892_06185 d2285a999fe88b23118704f8a372c457 577 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 577 28.172 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 M892_06185 d2285a999fe88b23118704f8a372c457 577 SMART SM00836 461 577 2.1E-41 T 12-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 M892_06185 d2285a999fe88b23118704f8a372c457 577 SMART SM01016 5 87 2.0E-28 T 12-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 M892_06185 d2285a999fe88b23118704f8a372c457 577 Gene3D G3DSA:3.30.1360.70 1 106 1.4E-33 T 12-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 M892_06185 d2285a999fe88b23118704f8a372c457 577 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 122 133 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 M892_06185 d2285a999fe88b23118704f8a372c457 577 Pfam PF05746 DALR anticodon binding domain 461 577 3.7E-36 T 12-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 M892_06185 d2285a999fe88b23118704f8a372c457 577 SUPERFAMILY SSF52374 111 454 1.29E-93 T 12-10-2018 M892_06185 d2285a999fe88b23118704f8a372c457 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 114 129 3.6E-25 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 M892_06185 d2285a999fe88b23118704f8a372c457 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 129 145 3.6E-25 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 M892_06185 d2285a999fe88b23118704f8a372c457 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 153 166 3.6E-25 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 M892_06185 d2285a999fe88b23118704f8a372c457 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 304 325 3.6E-25 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 M892_24025 8c7673d654bf75cef889e11309144624 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 47 72 5.2E-93 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_24025 8c7673d654bf75cef889e11309144624 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 411 430 5.2E-93 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_24025 8c7673d654bf75cef889e11309144624 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 324 339 5.2E-93 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_24025 8c7673d654bf75cef889e11309144624 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 198 216 5.2E-93 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_24025 8c7673d654bf75cef889e11309144624 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 383 401 5.2E-93 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_24025 8c7673d654bf75cef889e11309144624 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 461 482 5.2E-93 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_24025 8c7673d654bf75cef889e11309144624 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 278 299 5.2E-93 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_24025 8c7673d654bf75cef889e11309144624 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 166 178 5.2E-93 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_24025 8c7673d654bf75cef889e11309144624 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 227 246 5.2E-93 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_24025 8c7673d654bf75cef889e11309144624 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 348 369 5.2E-93 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_24025 8c7673d654bf75cef889e11309144624 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 97 120 5.2E-93 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_24025 8c7673d654bf75cef889e11309144624 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 124 148 5.2E-93 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_24025 8c7673d654bf75cef889e11309144624 678 SUPERFAMILY SSF81442 43 557 1.14E-174 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_24025 8c7673d654bf75cef889e11309144624 678 Gene3D G3DSA:1.20.210.10 30 559 3.9E-183 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_24025 8c7673d654bf75cef889e11309144624 678 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 57 502 1.8E-131 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_24025 8c7673d654bf75cef889e11309144624 678 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 280 334 - T 12-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_24025 8c7673d654bf75cef889e11309144624 678 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 2 648 0.0 T 12-10-2018 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 M892_09355 c2bf34af9b9e6b11a6036b0c651e9d4d 291 SUPERFAMILY SSF110710 33 257 3.4E-40 T 12-10-2018 IPR028345 Aminoglycoside 3-N-acetyltransferase-like M892_09355 c2bf34af9b9e6b11a6036b0c651e9d4d 291 Pfam PF02522 Aminoglycoside 3-N-acetyltransferase 62 250 1.3E-29 T 12-10-2018 IPR003679 Aminoglycoside N(3)-acetyltransferase GO:0046353|GO:0046677 M892_15810 f113f01678dfc99dfd31de70fe0db754 616 Gene3D G3DSA:3.40.1750.10 186 497 1.2E-162 T 12-10-2018 M892_15810 f113f01678dfc99dfd31de70fe0db754 616 Gene3D G3DSA:3.90.226.10 315 539 1.2E-162 T 12-10-2018 M892_15810 f113f01678dfc99dfd31de70fe0db754 616 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 16 608 3.9E-196 T 12-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 M892_15810 f113f01678dfc99dfd31de70fe0db754 616 Pfam PF01343 Peptidase family S49 391 541 1.6E-45 T 12-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 M892_15810 f113f01678dfc99dfd31de70fe0db754 616 Pfam PF01343 Peptidase family S49 138 294 4.7E-32 T 12-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 M892_15810 f113f01678dfc99dfd31de70fe0db754 616 Gene3D G3DSA:3.90.226.10 94 314 1.2E-162 T 12-10-2018 M892_15810 f113f01678dfc99dfd31de70fe0db754 616 SUPERFAMILY SSF52096 37 284 3.76E-30 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily M892_15810 f113f01678dfc99dfd31de70fe0db754 616 SUPERFAMILY SSF52096 316 529 4.16E-41 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily M892_15810 f113f01678dfc99dfd31de70fe0db754 616 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 327 539 2.1E-51 T 12-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 M892_15810 f113f01678dfc99dfd31de70fe0db754 616 PIRSF PIRSF001217 8 616 7.0E-230 T 12-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 M892_19710 12a97922f85135076d32889bfe97c20c 418 SUPERFAMILY SSF55174 321 414 8.64E-14 T 12-10-2018 M892_19710 12a97922f85135076d32889bfe97c20c 418 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 3 414 5.4E-123 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 M892_19710 12a97922f85135076d32889bfe97c20c 418 Pfam PF00579 tRNA synthetases class I (W and Y) 29 323 2.2E-82 T 12-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 M892_19710 12a97922f85135076d32889bfe97c20c 418 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 1 415 43.894 T 12-10-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 M892_19710 12a97922f85135076d32889bfe97c20c 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 162 177 8.2E-31 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 M892_19710 12a97922f85135076d32889bfe97c20c 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 183 205 8.2E-31 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 M892_19710 12a97922f85135076d32889bfe97c20c 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 216 228 8.2E-31 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 M892_19710 12a97922f85135076d32889bfe97c20c 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 42 64 8.2E-31 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 M892_19710 12a97922f85135076d32889bfe97c20c 418 Gene3D G3DSA:3.10.290.10 326 417 5.3E-21 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 M892_19710 12a97922f85135076d32889bfe97c20c 418 Gene3D G3DSA:3.40.50.620 1 222 5.7E-89 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M892_19710 12a97922f85135076d32889bfe97c20c 418 SUPERFAMILY SSF52374 2 323 1.07E-99 T 12-10-2018 M892_19710 12a97922f85135076d32889bfe97c20c 418 Gene3D G3DSA:1.10.240.10 223 325 5.1E-37 T 12-10-2018 M892_19710 12a97922f85135076d32889bfe97c20c 418 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 38 48 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 M892_08480 0d3dbe248aebd3fd2ece23f0bec281f0 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 2.4E-65 T 12-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_08480 0d3dbe248aebd3fd2ece23f0bec281f0 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.467 T 12-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 M892_08480 0d3dbe248aebd3fd2ece23f0bec281f0 142 Pfam PF00572 Ribosomal protein L13 15 138 3.6E-57 T 12-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 M892_08480 0d3dbe248aebd3fd2ece23f0bec281f0 142 PIRSF PIRSF002181 1 142 1.1E-52 T 12-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 M892_08480 0d3dbe248aebd3fd2ece23f0bec281f0 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 12-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 M892_08480 0d3dbe248aebd3fd2ece23f0bec281f0 142 SUPERFAMILY SSF52161 1 140 1.15E-60 T 12-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 M892_08480 0d3dbe248aebd3fd2ece23f0bec281f0 142 Gene3D G3DSA:3.90.1180.10 1 142 4.8E-64 T 12-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 M892_03005 d165c7858245845f7fd0466544ed120a 130 SUPERFAMILY SSF52540 21 97 3.72E-7 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_03005 d165c7858245845f7fd0466544ed120a 130 Gene3D G3DSA:3.40.50.300 14 123 7.9E-11 T 12-10-2018 M892_03005 d165c7858245845f7fd0466544ed120a 130 Pfam PF03846 Cell division inhibitor SulA 16 96 1.0E-6 T 12-10-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 M892_12470 c9776b396535e23728b05008f2e3f63d 197 Gene3D G3DSA:3.30.70.60 92 197 9.0E-26 T 12-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 M892_12470 c9776b396535e23728b05008f2e3f63d 197 Pfam PF04350 Pilus assembly protein, PilO 48 189 1.5E-44 T 12-10-2018 IPR007445 Pilus assembly protein, PilO M892_12470 c9776b396535e23728b05008f2e3f63d 197 PIRSF PIRSF016482 1 197 6.7E-69 T 12-10-2018 IPR007445 Pilus assembly protein, PilO M892_15785 403fc34809820bed61228b384576da49 331 PIRSF PIRSF000149 1 331 3.3E-135 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_15785 403fc34809820bed61228b384576da49 331 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 102 6.0E-40 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_15785 403fc34809820bed61228b384576da49 331 SMART SM00846 3 150 8.0E-96 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_15785 403fc34809820bed61228b384576da49 331 Gene3D G3DSA:3.40.50.720 4 326 1.5E-154 T 12-10-2018 M892_15785 403fc34809820bed61228b384576da49 331 SUPERFAMILY SSF51735 3 166 2.4E-67 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_15785 403fc34809820bed61228b384576da49 331 SUPERFAMILY SSF55347 149 312 3.43E-77 T 12-10-2018 M892_15785 403fc34809820bed61228b384576da49 331 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 9.8E-137 T 12-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_15785 403fc34809820bed61228b384576da49 331 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 12-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_15785 403fc34809820bed61228b384576da49 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 1.3E-45 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_15785 403fc34809820bed61228b384576da49 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 268 283 1.3E-45 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_15785 403fc34809820bed61228b384576da49 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 1.3E-45 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_15785 403fc34809820bed61228b384576da49 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 1.3E-45 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_15785 403fc34809820bed61228b384576da49 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 1.3E-45 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_15785 403fc34809820bed61228b384576da49 331 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 312 1.8E-69 T 12-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_15785 403fc34809820bed61228b384576da49 331 Gene3D G3DSA:3.30.360.10 149 314 1.5E-154 T 12-10-2018 M892_02050 5f6773f0d2eccb714b49052419950c73 239 SMART SM00382 29 201 2.5E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_02050 5f6773f0d2eccb714b49052419950c73 239 Gene3D G3DSA:3.40.50.300 2 229 2.1E-51 T 12-10-2018 M892_02050 5f6773f0d2eccb714b49052419950c73 239 Pfam PF00005 ABC transporter 25 165 2.8E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_02050 5f6773f0d2eccb714b49052419950c73 239 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_02050 5f6773f0d2eccb714b49052419950c73 239 SUPERFAMILY SSF52540 5 216 4.28E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_20050 dae3902b08849b755ee136cea51da900 214 Gene3D G3DSA:3.40.50.1000 5 196 9.0E-45 T 12-10-2018 IPR023214 HAD superfamily M892_20050 dae3902b08849b755ee136cea51da900 214 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 176 1.8E-21 T 12-10-2018 M892_20050 dae3902b08849b755ee136cea51da900 214 Gene3D G3DSA:1.10.150.240 19 78 9.0E-45 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 M892_20050 dae3902b08849b755ee136cea51da900 214 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 74 175 2.7E-14 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M892_20050 dae3902b08849b755ee136cea51da900 214 SUPERFAMILY SSF56784 5 199 1.92E-34 T 12-10-2018 IPR036412 HAD-like superfamily M892_09175 a026e4fb74a07323ace10283121e7f98 84 PRINTS PR00973 Ribosomal protein S17 family signature 24 47 8.9E-15 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_09175 a026e4fb74a07323ace10283121e7f98 84 PRINTS PR00973 Ribosomal protein S17 family signature 56 66 8.9E-15 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_09175 a026e4fb74a07323ace10283121e7f98 84 PRINTS PR00973 Ribosomal protein S17 family signature 66 73 8.9E-15 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_09175 a026e4fb74a07323ace10283121e7f98 84 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 5 76 8.0E-36 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_09175 a026e4fb74a07323ace10283121e7f98 84 Gene3D G3DSA:2.40.50.140 1 84 2.1E-38 T 12-10-2018 M892_09175 a026e4fb74a07323ace10283121e7f98 84 ProSitePatterns PS00056 Ribosomal protein S17 signature. 56 68 - T 12-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_09175 a026e4fb74a07323ace10283121e7f98 84 Pfam PF00366 Ribosomal protein S17 10 77 1.5E-34 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_09175 a026e4fb74a07323ace10283121e7f98 84 SUPERFAMILY SSF50249 6 83 6.0E-34 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M892_09175 a026e4fb74a07323ace10283121e7f98 84 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 5 80 25.567 T 12-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_09175 a026e4fb74a07323ace10283121e7f98 84 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 5 76 1.6E-38 T 12-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_09100 320fb20e346661184450aecd575cb715 206 Pfam PF01479 S4 domain 97 143 2.5E-18 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_09100 320fb20e346661184450aecd575cb715 206 SMART SM01390 3 95 6.8E-50 T 12-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 M892_09100 320fb20e346661184450aecd575cb715 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 1.6E-32 T 12-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 M892_09100 320fb20e346661184450aecd575cb715 206 SUPERFAMILY SSF55174 3 206 1.01E-72 T 12-10-2018 M892_09100 320fb20e346661184450aecd575cb715 206 Gene3D G3DSA:3.10.290.10 103 191 2.2E-36 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 M892_09100 320fb20e346661184450aecd575cb715 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 36.363 T 12-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 M892_09100 320fb20e346661184450aecd575cb715 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 12-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_09100 320fb20e346661184450aecd575cb715 206 Gene3D G3DSA:1.10.1050.10 1 102 5.8E-45 T 12-10-2018 M892_09100 320fb20e346661184450aecd575cb715 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 3.4E-85 T 12-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 M892_09100 320fb20e346661184450aecd575cb715 206 SMART SM00363 96 160 5.9E-20 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_05620 f37f4ef13f599bfb1e74fff876e0a3a1 582 TIGRFAM TIGR00345 GET3_arsA_TRC40: transport-energizing ATPase, TRC40/GET3/ArsA family 13 296 1.1E-81 T 12-10-2018 IPR016300 Arsenical pump ATPase, ArsA/GET3 GO:0005524|GO:0016887 Reactome: R-HSA-381038 M892_05620 f37f4ef13f599bfb1e74fff876e0a3a1 582 Pfam PF02374 Anion-transporting ATPase 330 475 1.4E-30 T 12-10-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 M892_05620 f37f4ef13f599bfb1e74fff876e0a3a1 582 Pfam PF02374 Anion-transporting ATPase 10 293 9.9E-80 T 12-10-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 M892_05620 f37f4ef13f599bfb1e74fff876e0a3a1 582 SUPERFAMILY SSF52540 8 293 5.06E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_05620 f37f4ef13f599bfb1e74fff876e0a3a1 582 SUPERFAMILY SSF52540 319 544 2.74E-41 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_05620 f37f4ef13f599bfb1e74fff876e0a3a1 582 TIGRFAM TIGR04291 arsen_driv_ArsA: arsenical pump-driving ATPase 8 569 5.7E-253 T 12-10-2018 IPR027541 Arsenical pump-driving ATPase GO:0005524|GO:0015446|GO:0016887|GO:0071722 MetaCyc: PWY-4621 M892_05620 f37f4ef13f599bfb1e74fff876e0a3a1 582 SMART SM00382 8 227 3.9 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_05620 f37f4ef13f599bfb1e74fff876e0a3a1 582 SMART SM00382 327 516 2.0E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_05620 f37f4ef13f599bfb1e74fff876e0a3a1 582 Gene3D G3DSA:3.40.50.300 3 297 1.5E-82 T 12-10-2018 M892_05620 f37f4ef13f599bfb1e74fff876e0a3a1 582 PIRSF PIRSF001327 1 582 1.1E-251 T 12-10-2018 IPR027541 Arsenical pump-driving ATPase GO:0005524|GO:0015446|GO:0016887|GO:0071722 MetaCyc: PWY-4621 M892_05620 f37f4ef13f599bfb1e74fff876e0a3a1 582 Gene3D G3DSA:3.40.50.300 311 580 1.1E-65 T 12-10-2018 M892_14210 9778d024311231f3d266732091aee620 258 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 11 230 1.2E-80 T 12-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 M892_14210 9778d024311231f3d266732091aee620 258 SMART SM01133 10 244 6.6E-79 T 12-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 M892_14210 9778d024311231f3d266732091aee620 258 Pfam PF01791 DeoC/LacD family aldolase 11 239 6.8E-48 T 12-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 M892_14210 9778d024311231f3d266732091aee620 258 Hamap MF_00592 Deoxyribose-phosphate aldolase [deoC]. 1 258 52.734 T 12-10-2018 IPR023649 Deoxyribose-phosphate aldolase type II GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 M892_14210 9778d024311231f3d266732091aee620 258 SUPERFAMILY SSF51569 6 245 7.54E-83 T 12-10-2018 M892_14210 9778d024311231f3d266732091aee620 258 PIRSF PIRSF001357 5 251 7.9E-77 T 12-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 M892_14210 9778d024311231f3d266732091aee620 258 Gene3D G3DSA:3.20.20.70 1 256 1.2E-101 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M892_25425 90ce214b8ecde804b3a30f77cb06cb96 1204 SUPERFAMILY SSF51055 455 506 6.08E-12 T 12-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 M892_25425 90ce214b8ecde804b3a30f77cb06cb96 1204 Gene3D G3DSA:2.60.40.10 351 447 6.3E-17 T 12-10-2018 IPR013783 Immunoglobulin-like fold M892_25425 90ce214b8ecde804b3a30f77cb06cb96 1204 Pfam PF14600 Cellulose-binding domain 453 506 1.5E-13 T 12-10-2018 IPR032798 Endoglucanase Z, cellulose-binding domain KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 M892_25425 90ce214b8ecde804b3a30f77cb06cb96 1204 SMART SM00495 461 502 4.8E-4 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 M892_25425 90ce214b8ecde804b3a30f77cb06cb96 1204 Gene3D G3DSA:2.60.40.10 157 247 2.1E-18 T 12-10-2018 IPR013783 Immunoglobulin-like fold M892_25425 90ce214b8ecde804b3a30f77cb06cb96 1204 Gene3D G3DSA:2.60.40.10 257 349 8.8E-13 T 12-10-2018 IPR013783 Immunoglobulin-like fold M892_25425 90ce214b8ecde804b3a30f77cb06cb96 1204 Gene3D G3DSA:2.10.10.20 453 506 1.4E-11 T 12-10-2018 M892_22855 552ce441229c2474c1ab5a02608411b8 236 Gene3D G3DSA:3.30.870.10 3 153 1.1E-6 T 12-10-2018 M892_22855 552ce441229c2474c1ab5a02608411b8 236 Pfam PF13091 PLD-like domain 15 131 4.7E-7 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 M892_22855 552ce441229c2474c1ab5a02608411b8 236 SUPERFAMILY SSF56024 11 129 4.63E-7 T 12-10-2018 M892_04305 38f76465d580e3633695ad8e41db45bc 726 SUPERFAMILY SSF48113 18 429 1.62E-152 T 12-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 M892_04305 38f76465d580e3633695ad8e41db45bc 726 ProSitePatterns PS00436 Peroxidases active site signature. 88 99 - T 12-10-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 M892_04305 38f76465d580e3633695ad8e41db45bc 726 Gene3D G3DSA:1.10.420.20 189 395 2.7E-217 T 12-10-2018 M892_04305 38f76465d580e3633695ad8e41db45bc 726 Gene3D G3DSA:1.10.420.10 581 702 2.4E-139 T 12-10-2018 M892_04305 38f76465d580e3633695ad8e41db45bc 726 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 8 726 0.0 T 12-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 M892_04305 38f76465d580e3633695ad8e41db45bc 726 Gene3D G3DSA:1.10.520.10 431 726 2.4E-139 T 12-10-2018 M892_04305 38f76465d580e3633695ad8e41db45bc 726 Hamap MF_01961 Catalase-peroxidase [katG]. 5 726 39.497 T 12-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 M892_04305 38f76465d580e3633695ad8e41db45bc 726 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 50 63 7.7E-51 T 12-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 M892_04305 38f76465d580e3633695ad8e41db45bc 726 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 265 288 7.7E-51 T 12-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 M892_04305 38f76465d580e3633695ad8e41db45bc 726 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 24 46 7.7E-51 T 12-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 M892_04305 38f76465d580e3633695ad8e41db45bc 726 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 479 505 7.7E-51 T 12-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 M892_04305 38f76465d580e3633695ad8e41db45bc 726 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 65 90 7.7E-51 T 12-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 M892_04305 38f76465d580e3633695ad8e41db45bc 726 PRINTS PR00458 Haem peroxidase superfamily signature 166 178 3.0E-18 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 M892_04305 38f76465d580e3633695ad8e41db45bc 726 PRINTS PR00458 Haem peroxidase superfamily signature 316 331 3.0E-18 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 M892_04305 38f76465d580e3633695ad8e41db45bc 726 PRINTS PR00458 Haem peroxidase superfamily signature 88 102 3.0E-18 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 M892_04305 38f76465d580e3633695ad8e41db45bc 726 PRINTS PR00458 Haem peroxidase superfamily signature 148 165 3.0E-18 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 M892_04305 38f76465d580e3633695ad8e41db45bc 726 PRINTS PR00458 Haem peroxidase superfamily signature 257 272 3.0E-18 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 M892_04305 38f76465d580e3633695ad8e41db45bc 726 Pfam PF00141 Peroxidase 404 701 7.0E-34 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 M892_04305 38f76465d580e3633695ad8e41db45bc 726 Pfam PF00141 Peroxidase 66 395 1.5E-50 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 M892_04305 38f76465d580e3633695ad8e41db45bc 726 Gene3D G3DSA:1.10.520.10 26 430 2.7E-217 T 12-10-2018 M892_04305 38f76465d580e3633695ad8e41db45bc 726 SUPERFAMILY SSF48113 435 726 1.41E-103 T 12-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 M892_07590 e89105bef54aefd4fe59f42ba60b7d2c 141 SMART SM00562 3 140 8.2E-94 T 12-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 M892_07590 e89105bef54aefd4fe59f42ba60b7d2c 141 Gene3D G3DSA:3.30.70.141 1 141 1.5E-61 T 12-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 M892_07590 e89105bef54aefd4fe59f42ba60b7d2c 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 2.8E-39 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 M892_07590 e89105bef54aefd4fe59f42ba60b7d2c 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 2.8E-39 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 M892_07590 e89105bef54aefd4fe59f42ba60b7d2c 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 2.8E-39 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 M892_07590 e89105bef54aefd4fe59f42ba60b7d2c 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 2.8E-39 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 M892_07590 e89105bef54aefd4fe59f42ba60b7d2c 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 2.8E-39 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 M892_07590 e89105bef54aefd4fe59f42ba60b7d2c 141 SUPERFAMILY SSF54919 1 140 1.83E-62 T 12-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 M892_07590 e89105bef54aefd4fe59f42ba60b7d2c 141 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 36.812 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 M892_07590 e89105bef54aefd4fe59f42ba60b7d2c 141 Pfam PF00334 Nucleoside diphosphate kinase 4 138 1.0E-59 T 12-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 M892_07590 e89105bef54aefd4fe59f42ba60b7d2c 141 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 12-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 M892_14585 cfd5802455c1ee76750010b51faaa980 607 SUPERFAMILY SSF53649 246 572 1.31E-59 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 M892_14585 cfd5802455c1ee76750010b51faaa980 607 Pfam PF00884 Sulfatase 250 519 1.8E-31 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 M892_14585 cfd5802455c1ee76750010b51faaa980 607 Pfam PF11893 Domain of unknown function (DUF3413) 3 242 1.6E-51 T 12-10-2018 IPR024588 Inner membrane protein YejM, N-terminal M892_14585 cfd5802455c1ee76750010b51faaa980 607 PIRSF PIRSF004950 1 606 6.4E-228 T 12-10-2018 IPR012159 Inner membrane protein YejM M892_14585 cfd5802455c1ee76750010b51faaa980 607 Gene3D G3DSA:3.40.720.10 239 531 5.8E-52 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 M892_15035 be0919ec1cfabd46206037eda853afb6 136 Gene3D G3DSA:3.40.630.30 3 132 6.0E-30 T 12-10-2018 M892_15035 be0919ec1cfabd46206037eda853afb6 136 SUPERFAMILY SSF55729 13 122 5.23E-18 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_15035 be0919ec1cfabd46206037eda853afb6 136 Pfam PF13508 Acetyltransferase (GNAT) domain 55 119 5.9E-11 T 12-10-2018 IPR000182 GNAT domain M892_02455 3658bce9f6385270560037c2686e5ad3 357 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 6 143 5.5E-56 T 12-10-2018 M892_02455 3658bce9f6385270560037c2686e5ad3 357 SUPERFAMILY SSF54593 5 341 2.13E-76 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M892_02455 3658bce9f6385270560037c2686e5ad3 357 PIRSF PIRSF009283 1 355 5.6E-125 T 12-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 M892_02455 3658bce9f6385270560037c2686e5ad3 357 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 12 354 9.0E-131 T 12-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 M892_02455 3658bce9f6385270560037c2686e5ad3 357 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 163 275 1.7E-13 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain M892_02455 3658bce9f6385270560037c2686e5ad3 357 Gene3D G3DSA:3.10.180.10 3 155 7.5E-45 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M892_02455 3658bce9f6385270560037c2686e5ad3 357 Gene3D G3DSA:3.10.180.10 158 355 4.6E-69 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M892_26540 b75652efb29d0a9956e63bd039a14e19 339 SUPERFAMILY SSF51395 26 338 1.24E-72 T 12-10-2018 M892_26540 b75652efb29d0a9956e63bd039a14e19 339 PIRSF PIRSF003314 1 339 5.6E-116 T 12-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 M892_26540 b75652efb29d0a9956e63bd039a14e19 339 TIGRFAM TIGR02151 IPP_isom_2: isopentenyl-diphosphate delta-isomerase, type 2 6 337 3.7E-114 T 12-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 M892_26540 b75652efb29d0a9956e63bd039a14e19 339 Hamap MF_00354 Isopentenyl-diphosphate delta-isomerase [fni]. 4 338 37.977 T 12-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 M892_26540 b75652efb29d0a9956e63bd039a14e19 339 Pfam PF01070 FMN-dependent dehydrogenase 17 103 3.6E-8 T 12-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 M892_26540 b75652efb29d0a9956e63bd039a14e19 339 Pfam PF01070 FMN-dependent dehydrogenase 110 335 6.2E-18 T 12-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 M892_26540 b75652efb29d0a9956e63bd039a14e19 339 Gene3D G3DSA:3.20.20.70 3 339 1.8E-113 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M892_23815 f364fe8c0ea2a46982450e372ee24d63 321 SUPERFAMILY SSF52467 199 320 9.35E-49 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily M892_23815 f364fe8c0ea2a46982450e372ee24d63 321 Pfam PF01012 Electron transfer flavoprotein domain 8 173 2.5E-37 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 M892_23815 f364fe8c0ea2a46982450e372ee24d63 321 Gene3D G3DSA:3.40.50.1220 196 321 1.3E-57 T 12-10-2018 M892_23815 f364fe8c0ea2a46982450e372ee24d63 321 SMART SM00893 8 194 2.7E-38 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 M892_23815 f364fe8c0ea2a46982450e372ee24d63 321 PIRSF PIRSF000089 6 321 4.2E-107 T 12-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 M892_23815 f364fe8c0ea2a46982450e372ee24d63 321 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 202 284 4.6E-36 T 12-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 M892_23815 f364fe8c0ea2a46982450e372ee24d63 321 Gene3D G3DSA:3.40.50.620 8 194 1.7E-50 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M892_23815 f364fe8c0ea2a46982450e372ee24d63 321 SUPERFAMILY SSF52402 8 189 4.19E-47 T 12-10-2018 M892_23815 f364fe8c0ea2a46982450e372ee24d63 321 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 265 291 - T 12-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 M892_23355 55a4438396637a6005e02cbe50d9ab2a 565 Gene3D G3DSA:2.60.40.10 351 428 6.0E-27 T 12-10-2018 IPR013783 Immunoglobulin-like fold M892_23355 55a4438396637a6005e02cbe50d9ab2a 565 Pfam PF16403 Domain of unknown function (DUF5011) 435 505 3.3E-18 T 12-10-2018 IPR032179 Domain of unknown function DUF5011 M892_23355 55a4438396637a6005e02cbe50d9ab2a 565 Pfam PF16403 Domain of unknown function (DUF5011) 359 428 1.3E-17 T 12-10-2018 IPR032179 Domain of unknown function DUF5011 M892_23355 55a4438396637a6005e02cbe50d9ab2a 565 SMART SM00495 511 561 2.4E-5 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 M892_23355 55a4438396637a6005e02cbe50d9ab2a 565 Gene3D G3DSA:3.20.20.80 32 350 2.8E-96 T 12-10-2018 M892_23355 55a4438396637a6005e02cbe50d9ab2a 565 SMART SM00636 37 322 7.3E-4 T 12-10-2018 IPR011583 Chitinase II GO:0008061 M892_23355 55a4438396637a6005e02cbe50d9ab2a 565 ProSitePatterns PS01095 Chitinases family 18 active site. 151 159 - T 12-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 M892_23355 55a4438396637a6005e02cbe50d9ab2a 565 SUPERFAMILY SSF51445 35 331 5.22E-60 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily M892_23355 55a4438396637a6005e02cbe50d9ab2a 565 Pfam PF00704 Glycosyl hydrolases family 18 39 322 1.2E-33 T 12-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 M892_23355 55a4438396637a6005e02cbe50d9ab2a 565 Gene3D G3DSA:2.60.40.10 429 508 3.6E-27 T 12-10-2018 IPR013783 Immunoglobulin-like fold M892_27545 01f5596cab88680c81646a8ef0590853 407 Pfam PF02954 Bacterial regulatory protein, Fis family 360 398 1.5E-6 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M892_27545 01f5596cab88680c81646a8ef0590853 407 SUPERFAMILY SSF52172 5 187 1.71E-38 T 12-10-2018 IPR011006 CheY-like superfamily M892_27545 01f5596cab88680c81646a8ef0590853 407 Gene3D G3DSA:3.40.50.300 143 275 1.4E-5 T 12-10-2018 M892_27545 01f5596cab88680c81646a8ef0590853 407 Gene3D G3DSA:3.40.50.2300 2 136 1.0E-34 T 12-10-2018 M892_27545 01f5596cab88680c81646a8ef0590853 407 Gene3D G3DSA:1.10.10.60 347 403 1.2E-7 T 12-10-2018 M892_27545 01f5596cab88680c81646a8ef0590853 407 SUPERFAMILY SSF52540 144 333 1.27E-10 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_27545 01f5596cab88680c81646a8ef0590853 407 SMART SM00448 3 114 6.8E-32 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_27545 01f5596cab88680c81646a8ef0590853 407 Pfam PF00072 Response regulator receiver domain 5 114 6.2E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_27545 01f5596cab88680c81646a8ef0590853 407 SUPERFAMILY SSF46689 349 401 4.3E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_27545 01f5596cab88680c81646a8ef0590853 407 Gene3D G3DSA:1.10.8.60 276 346 2.1E-10 T 12-10-2018 M892_00800 f0708a989ae9e781d134d4be7b89c97f 374 Gene3D G3DSA:3.30.450.40 10 154 4.6E-6 T 12-10-2018 IPR029016 GAF-like domain superfamily M892_00800 f0708a989ae9e781d134d4be7b89c97f 374 SUPERFAMILY SSF109604 175 352 1.26E-13 T 12-10-2018 M892_00800 f0708a989ae9e781d134d4be7b89c97f 374 Gene3D G3DSA:1.10.3210.10 156 368 5.5E-31 T 12-10-2018 M892_00800 f0708a989ae9e781d134d4be7b89c97f 374 SUPERFAMILY SSF55781 13 138 6.87E-8 T 12-10-2018 M892_00800 f0708a989ae9e781d134d4be7b89c97f 374 Pfam PF13487 HD domain 273 304 1.0E-8 T 12-10-2018 M892_15365 8edfb665df41f8caa63d3ff622b50121 259 Gene3D G3DSA:3.40.50.300 1 254 8.2E-66 T 12-10-2018 M892_15365 8edfb665df41f8caa63d3ff622b50121 259 SUPERFAMILY SSF52540 1 252 4.71E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_15365 8edfb665df41f8caa63d3ff622b50121 259 Pfam PF13614 AAA domain 4 174 5.8E-50 T 12-10-2018 IPR025669 AAA domain M892_27925 af44f543a37fd5ea2f0b8264329b5585 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.4E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_27925 af44f543a37fd5ea2f0b8264329b5585 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.4E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_27925 af44f543a37fd5ea2f0b8264329b5585 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.4E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_27925 af44f543a37fd5ea2f0b8264329b5585 297 Gene3D G3DSA:3.40.190.290 130 276 9.5E-6 T 12-10-2018 M892_27925 af44f543a37fd5ea2f0b8264329b5585 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 2.0E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_27925 af44f543a37fd5ea2f0b8264329b5585 297 SUPERFAMILY SSF46785 1 81 3.4E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_27925 af44f543a37fd5ea2f0b8264329b5585 297 Pfam PF03466 LysR substrate binding domain 126 277 2.0E-11 T 12-10-2018 IPR005119 LysR, substrate-binding M892_27925 af44f543a37fd5ea2f0b8264329b5585 297 SUPERFAMILY SSF53850 90 279 7.06E-17 T 12-10-2018 M892_27925 af44f543a37fd5ea2f0b8264329b5585 297 Gene3D G3DSA:1.10.10.10 1 83 3.2E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_07895 063d50565b3e77f968ece5e2bb12a3f1 489 Pfam PF01464 Transglycosylase SLT domain 305 419 5.6E-21 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 M892_07895 063d50565b3e77f968ece5e2bb12a3f1 489 SMART SM00062 47 284 1.2E-19 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M892_07895 063d50565b3e77f968ece5e2bb12a3f1 489 Gene3D G3DSA:1.10.530.10 300 465 1.6E-40 T 12-10-2018 M892_07895 063d50565b3e77f968ece5e2bb12a3f1 489 SUPERFAMILY SSF53850 42 272 4.3E-35 T 12-10-2018 M892_07895 063d50565b3e77f968ece5e2bb12a3f1 489 Gene3D G3DSA:3.40.190.10 42 272 2.0E-48 T 12-10-2018 M892_07895 063d50565b3e77f968ece5e2bb12a3f1 489 SUPERFAMILY SSF53955 301 461 1.63E-38 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily M892_07895 063d50565b3e77f968ece5e2bb12a3f1 489 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 57 270 7.5E-28 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M892_07895 063d50565b3e77f968ece5e2bb12a3f1 489 Gene3D G3DSA:3.40.190.10 136 240 2.0E-48 T 12-10-2018 M892_10370 24752928bc877544b7c1114b0e966cd8 671 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 670 40.773 T 12-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 M892_10370 24752928bc877544b7c1114b0e966cd8 671 Gene3D G3DSA:3.40.50.300 274 634 5.4E-123 T 12-10-2018 M892_10370 24752928bc877544b7c1114b0e966cd8 671 Pfam PF13361 UvrD-like helicase C-terminal domain 271 615 8.9E-73 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 M892_10370 24752928bc877544b7c1114b0e966cd8 671 Gene3D G3DSA:1.10.10.160 108 181 6.7E-99 T 12-10-2018 IPR013986 DExx box DNA helicase domain superfamily M892_10370 24752928bc877544b7c1114b0e966cd8 671 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 265 3.5E-78 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 M892_10370 24752928bc877544b7c1114b0e966cd8 671 Gene3D G3DSA:3.40.50.300 4 266 6.7E-99 T 12-10-2018 M892_10370 24752928bc877544b7c1114b0e966cd8 671 Gene3D G3DSA:1.10.486.10 377 546 5.4E-123 T 12-10-2018 M892_10370 24752928bc877544b7c1114b0e966cd8 671 SUPERFAMILY SSF52540 1 640 1.62E-161 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_10370 24752928bc877544b7c1114b0e966cd8 671 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 2 669 0.0 T 12-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 M892_04180 ffd6ba31cf73581e55deb63a986c966d 208 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 40 196 4.3E-56 T 12-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like M892_04180 ffd6ba31cf73581e55deb63a986c966d 208 Gene3D G3DSA:2.50.20.10 26 207 3.3E-47 T 12-10-2018 M892_04180 ffd6ba31cf73581e55deb63a986c966d 208 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 13 206 31.836 T 12-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 M892_04180 ffd6ba31cf73581e55deb63a986c966d 208 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 12 207 5.0E-63 T 12-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 M892_04180 ffd6ba31cf73581e55deb63a986c966d 208 SUPERFAMILY SSF89392 30 207 1.18E-51 T 12-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX M892_25720 5e8379afa381334b7806613e7c1e9371 248 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 6 127 1.7E-18 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I M892_25720 5e8379afa381334b7806613e7c1e9371 248 SUPERFAMILY SSF52788 2 129 1.13E-34 T 12-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily M892_25720 5e8379afa381334b7806613e7c1e9371 248 Gene3D G3DSA:3.40.50.2300 1 131 3.9E-35 T 12-10-2018 M892_25720 5e8379afa381334b7806613e7c1e9371 248 SMART SM00226 4 132 5.0E-22 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I M892_25720 5e8379afa381334b7806613e7c1e9371 248 Gene3D G3DSA:1.10.10.10 133 227 1.6E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_25720 5e8379afa381334b7806613e7c1e9371 248 SMART SM00418 145 227 2.6E-19 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M892_25720 5e8379afa381334b7806613e7c1e9371 248 Pfam PF01022 Bacterial regulatory protein, arsR family 152 193 3.7E-11 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M892_25720 5e8379afa381334b7806613e7c1e9371 248 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 167 178 2.0E-14 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M892_25720 5e8379afa381334b7806613e7c1e9371 248 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 147 162 2.0E-14 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M892_25720 5e8379afa381334b7806613e7c1e9371 248 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 180 195 2.0E-14 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M892_25720 5e8379afa381334b7806613e7c1e9371 248 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 195 210 2.0E-14 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M892_25720 5e8379afa381334b7806613e7c1e9371 248 SUPERFAMILY SSF46785 136 223 7.44E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_06855 fca8e133dcba43494ee3ec56e69c2661 862 Pfam PF08264 Anticodon-binding domain of tRNA 704 825 1.1E-16 T 12-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 M892_06855 fca8e133dcba43494ee3ec56e69c2661 862 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 M892_06855 fca8e133dcba43494ee3ec56e69c2661 862 Gene3D G3DSA:3.40.50.620 33 569 0.0 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M892_06855 fca8e133dcba43494ee3ec56e69c2661 862 Gene3D G3DSA:3.10.20.590 801 861 1.2E-24 T 12-10-2018 M892_06855 fca8e133dcba43494ee3ec56e69c2661 862 SUPERFAMILY SSF52374 4 671 1.01E-146 T 12-10-2018 M892_06855 fca8e133dcba43494ee3ec56e69c2661 862 Gene3D G3DSA:1.10.730.10 8 793 0.0 T 12-10-2018 M892_06855 fca8e133dcba43494ee3ec56e69c2661 862 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 861 0.0 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 M892_06855 fca8e133dcba43494ee3ec56e69c2661 862 SUPERFAMILY SSF50677 226 419 1.26E-56 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 M892_06855 fca8e133dcba43494ee3ec56e69c2661 862 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 861 23.397 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 M892_06855 fca8e133dcba43494ee3ec56e69c2661 862 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 622 654 2.0E-7 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 M892_06855 fca8e133dcba43494ee3ec56e69c2661 862 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 422 575 2.0E-9 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 M892_06855 fca8e133dcba43494ee3ec56e69c2661 862 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 172 4.1E-26 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 M892_06855 fca8e133dcba43494ee3ec56e69c2661 862 SUPERFAMILY SSF47323 665 861 7.48E-36 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 M892_06855 fca8e133dcba43494ee3ec56e69c2661 862 Gene3D G3DSA:3.90.740.10 227 418 0.0 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 M892_06855 fca8e133dcba43494ee3ec56e69c2661 862 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 8.3E-52 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 M892_06855 fca8e133dcba43494ee3ec56e69c2661 862 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 8.3E-52 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 M892_06855 fca8e133dcba43494ee3ec56e69c2661 862 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 8.3E-52 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 M892_06855 fca8e133dcba43494ee3ec56e69c2661 862 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 8.3E-52 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 M892_06855 fca8e133dcba43494ee3ec56e69c2661 862 PRINTS PR00985 Leucyl-tRNA synthetase signature 527 549 8.3E-52 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 M892_06855 fca8e133dcba43494ee3ec56e69c2661 862 PRINTS PR00985 Leucyl-tRNA synthetase signature 560 570 8.3E-52 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 M892_06855 fca8e133dcba43494ee3ec56e69c2661 862 PRINTS PR00985 Leucyl-tRNA synthetase signature 489 507 8.3E-52 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 M892_06855 fca8e133dcba43494ee3ec56e69c2661 862 Gene3D G3DSA:3.10.330.110 570 631 0.0 T 12-10-2018 M892_06855 fca8e133dcba43494ee3ec56e69c2661 862 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 408 1.5E-77 T 12-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 M892_10270 a66fe27f2e4467bd9ead530428caf432 450 Gene3D G3DSA:3.30.200.20 70 156 9.9E-20 T 12-10-2018 M892_10270 a66fe27f2e4467bd9ead530428caf432 450 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 198 210 - T 12-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 M892_10270 a66fe27f2e4467bd9ead530428caf432 450 SMART SM00220 79 325 1.7E-27 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 M892_10270 a66fe27f2e4467bd9ead530428caf432 450 SUPERFAMILY SSF56112 73 285 3.64E-52 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily M892_10270 a66fe27f2e4467bd9ead530428caf432 450 Gene3D G3DSA:1.10.510.10 157 326 3.0E-28 T 12-10-2018 M892_10270 a66fe27f2e4467bd9ead530428caf432 450 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 85 110 - T 12-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 M892_10270 a66fe27f2e4467bd9ead530428caf432 450 Pfam PF00069 Protein kinase domain 79 280 3.6E-38 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 M892_25160 eba21eb6083b47a52402143f8fdc159b 605 Pfam PF03476 MOSC N-terminal beta barrel domain 5 117 3.5E-29 T 12-10-2018 IPR005303 MOSC, N-terminal beta barrel KEGG: 00790+2.8.1.9|MetaCyc: PWY-5963 M892_25160 eba21eb6083b47a52402143f8fdc159b 605 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 478 486 2.5E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 M892_25160 eba21eb6083b47a52402143f8fdc159b 605 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 388 407 2.5E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 M892_25160 eba21eb6083b47a52402143f8fdc159b 605 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 309 319 2.5E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 M892_25160 eba21eb6083b47a52402143f8fdc159b 605 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 328 335 2.5E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 M892_25160 eba21eb6083b47a52402143f8fdc159b 605 SUPERFAMILY SSF52343 368 508 1.44E-35 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain M892_25160 eba21eb6083b47a52402143f8fdc159b 605 Gene3D G3DSA:3.10.20.30 508 605 1.6E-20 T 12-10-2018 IPR012675 Beta-grasp domain superfamily M892_25160 eba21eb6083b47a52402143f8fdc159b 605 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 535 597 1.2E-11 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 M892_25160 eba21eb6083b47a52402143f8fdc159b 605 Gene3D G3DSA:3.40.50.80 381 507 3.3E-31 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain M892_25160 eba21eb6083b47a52402143f8fdc159b 605 Pfam PF00175 Oxidoreductase NAD-binding domain 389 492 4.1E-17 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 M892_25160 eba21eb6083b47a52402143f8fdc159b 605 Pfam PF03473 MOSC domain 139 262 6.0E-30 T 12-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 M892_25160 eba21eb6083b47a52402143f8fdc159b 605 Pfam PF00970 Oxidoreductase FAD-binding domain 283 378 1.5E-15 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 M892_25160 eba21eb6083b47a52402143f8fdc159b 605 SUPERFAMILY SSF141673 6 133 3.27E-28 T 12-10-2018 M892_25160 eba21eb6083b47a52402143f8fdc159b 605 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 555 563 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 M892_25160 eba21eb6083b47a52402143f8fdc159b 605 SUPERFAMILY SSF50800 5 264 8.37E-15 T 12-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily M892_25160 eba21eb6083b47a52402143f8fdc159b 605 SUPERFAMILY SSF63380 274 381 6.3E-26 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel M892_25160 eba21eb6083b47a52402143f8fdc159b 605 Gene3D G3DSA:2.40.30.10 278 378 6.2E-25 T 12-10-2018 M892_25160 eba21eb6083b47a52402143f8fdc159b 605 PRINTS PR00410 Phenol hydroxylase reductase family signature 309 321 1.4E-7 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 M892_25160 eba21eb6083b47a52402143f8fdc159b 605 PRINTS PR00410 Phenol hydroxylase reductase family signature 372 381 1.4E-7 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 M892_25160 eba21eb6083b47a52402143f8fdc159b 605 PRINTS PR00410 Phenol hydroxylase reductase family signature 388 407 1.4E-7 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 M892_25160 eba21eb6083b47a52402143f8fdc159b 605 PRINTS PR00410 Phenol hydroxylase reductase family signature 478 486 1.4E-7 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 M892_25160 eba21eb6083b47a52402143f8fdc159b 605 SUPERFAMILY SSF54292 501 604 8.26E-25 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 M892_26860 8ffdd47a3b68ef2ee7f9f69fe6ab4c4c 726 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 127 717 1.4E-190 T 12-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 M892_26860 8ffdd47a3b68ef2ee7f9f69fe6ab4c4c 726 Pfam PF02446 4-alpha-glucanotransferase 177 699 3.9E-126 T 12-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 M892_26860 8ffdd47a3b68ef2ee7f9f69fe6ab4c4c 726 SUPERFAMILY SSF51445 163 717 1.66E-148 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily M892_04555 a2329fa469df344a7c10ff9b4106919c 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 2 59 1.9E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_04555 a2329fa469df344a7c10ff9b4106919c 305 SUPERFAMILY SSF53850 86 299 5.07E-24 T 12-10-2018 M892_04555 a2329fa469df344a7c10ff9b4106919c 305 Pfam PF03466 LysR substrate binding domain 86 296 4.1E-18 T 12-10-2018 IPR005119 LysR, substrate-binding M892_04555 a2329fa469df344a7c10ff9b4106919c 305 Gene3D G3DSA:3.40.190.290 88 295 2.5E-35 T 12-10-2018 M892_04555 a2329fa469df344a7c10ff9b4106919c 305 Gene3D G3DSA:1.10.10.10 1 85 2.7E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_04555 a2329fa469df344a7c10ff9b4106919c 305 SUPERFAMILY SSF46785 2 107 1.45E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_19055 65dff124f4536435e95d1366ad491efa 302 Gene3D G3DSA:3.40.190.10 163 263 1.5E-70 T 12-10-2018 M892_19055 65dff124f4536435e95d1366ad491efa 302 SUPERFAMILY SSF53850 89 294 3.08E-49 T 12-10-2018 M892_19055 65dff124f4536435e95d1366ad491efa 302 SUPERFAMILY SSF46785 7 112 9.09E-24 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_19055 65dff124f4536435e95d1366ad491efa 302 Gene3D G3DSA:3.40.190.10 92 289 1.5E-70 T 12-10-2018 M892_19055 65dff124f4536435e95d1366ad491efa 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 1.1E-21 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_19055 65dff124f4536435e95d1366ad491efa 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.3E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_19055 65dff124f4536435e95d1366ad491efa 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.3E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_19055 65dff124f4536435e95d1366ad491efa 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.3E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_19055 65dff124f4536435e95d1366ad491efa 302 Pfam PF03466 LysR substrate binding domain 88 292 6.5E-49 T 12-10-2018 IPR005119 LysR, substrate-binding M892_19055 65dff124f4536435e95d1366ad491efa 302 Gene3D G3DSA:1.10.10.10 3 91 1.2E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_15005 799054bf435ad24a43eeb75f2681441d 252 SMART SM00849 12 166 1.2E-32 T 12-10-2018 IPR001279 Metallo-beta-lactamase M892_15005 799054bf435ad24a43eeb75f2681441d 252 PIRSF PIRSF005457 1 252 3.4E-98 T 12-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 M892_15005 799054bf435ad24a43eeb75f2681441d 252 Gene3D G3DSA:3.60.15.10 1 252 1.2E-91 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like M892_15005 799054bf435ad24a43eeb75f2681441d 252 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 2 252 45.009 T 12-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 M892_15005 799054bf435ad24a43eeb75f2681441d 252 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 167 252 1.2E-25 T 12-10-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 M892_15005 799054bf435ad24a43eeb75f2681441d 252 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 252 7.8E-103 T 12-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 M892_15005 799054bf435ad24a43eeb75f2681441d 252 SUPERFAMILY SSF56281 2 252 6.94E-68 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like M892_07255 9814bf09e5d55b9b175a4b0e0dc0e9ff 185 Gene3D G3DSA:3.30.700.10 19 144 2.5E-7 T 12-10-2018 M892_07255 9814bf09e5d55b9b175a4b0e0dc0e9ff 185 PIRSF PIRSF024622 1 185 2.1E-82 T 12-10-2018 IPR016824 Tfp pilus assembly protein FimT M892_07255 9814bf09e5d55b9b175a4b0e0dc0e9ff 185 Pfam PF12019 Type II transport protein GspH 55 150 1.4E-7 T 12-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 M892_07255 9814bf09e5d55b9b175a4b0e0dc0e9ff 185 SUPERFAMILY SSF54523 19 162 5.26E-13 T 12-10-2018 M892_07255 9814bf09e5d55b9b175a4b0e0dc0e9ff 185 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 17 39 1.2E-6 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M892_07255 9814bf09e5d55b9b175a4b0e0dc0e9ff 185 Pfam PF07963 Prokaryotic N-terminal methylation motif 17 38 1.1E-4 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M892_16715 984d70a74a7466485f240071e6107b45 209 SUPERFAMILY SSF53335 5 207 3.19E-29 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M892_16715 984d70a74a7466485f240071e6107b45 209 Pfam PF13489 Methyltransferase domain 38 183 1.4E-14 T 12-10-2018 M892_16715 984d70a74a7466485f240071e6107b45 209 Gene3D G3DSA:3.40.50.150 2 195 1.3E-23 T 12-10-2018 M892_06905 16e3da29204830dd921187751c1853b1 321 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 26 73 1.7E-8 T 12-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 M892_06905 16e3da29204830dd921187751c1853b1 321 PIRSF PIRSF005963 1 321 8.8E-129 T 12-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 M892_06905 16e3da29204830dd921187751c1853b1 321 Gene3D G3DSA:3.20.20.70 48 293 6.2E-23 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M892_06905 16e3da29204830dd921187751c1853b1 321 TIGRFAM TIGR00510 lipA: lipoyl synthase 21 319 8.7E-148 T 12-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 M892_06905 16e3da29204830dd921187751c1853b1 321 SUPERFAMILY SSF102114 52 315 1.29E-67 T 12-10-2018 M892_06905 16e3da29204830dd921187751c1853b1 321 Hamap MF_00206 Lipoyl synthase [lipA]. 1 321 154.128 T 12-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 M892_06905 16e3da29204830dd921187751c1853b1 321 Pfam PF04055 Radical SAM superfamily 91 252 1.3E-18 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 M892_06905 16e3da29204830dd921187751c1853b1 321 SMART SM00729 84 293 7.2E-19 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 M892_23375 27669c22f7e479572affd472652b267d 429 Gene3D G3DSA:1.25.40.10 193 293 1.2E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_23375 27669c22f7e479572affd472652b267d 429 SMART SM00448 11 129 1.4E-12 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_23375 27669c22f7e479572affd472652b267d 429 SUPERFAMILY SSF52172 9 148 2.56E-19 T 12-10-2018 IPR011006 CheY-like superfamily M892_23375 27669c22f7e479572affd472652b267d 429 Pfam PF00072 Response regulator receiver domain 13 129 7.0E-13 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_23375 27669c22f7e479572affd472652b267d 429 SUPERFAMILY SSF48452 197 286 4.56E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_23375 27669c22f7e479572affd472652b267d 429 Gene3D G3DSA:3.40.50.2300 3 150 9.9E-18 T 12-10-2018 M892_03545 752801e3a84b2a1724459908b17fee90 514 Pfam PF13817 IS66 C-terminal element 474 510 7.6E-8 T 12-10-2018 IPR039552 Transposase IS66, C-terminal M892_03545 752801e3a84b2a1724459908b17fee90 514 Pfam PF13007 Transposase C of IS166 homeodomain 42 112 2.2E-14 T 12-10-2018 IPR024463 Transposase TnpC, homeodomain M892_03545 752801e3a84b2a1724459908b17fee90 514 Pfam PF13005 zinc-finger binding domain of transposase IS66 120 164 1.6E-16 T 12-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 M892_03545 752801e3a84b2a1724459908b17fee90 514 Pfam PF03050 Transposase IS66 family 184 467 1.1E-101 T 12-10-2018 IPR004291 Transposase, IS66 M892_01850 9a3a394cbbaa4d4a9d46b7170f3a8f0e 475 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 9 466 1.9E-230 T 12-10-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 M892_01850 9a3a394cbbaa4d4a9d46b7170f3a8f0e 475 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 205 260 - T 12-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_01850 9a3a394cbbaa4d4a9d46b7170f3a8f0e 475 Gene3D G3DSA:1.20.210.10 4 472 1.1E-205 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_01850 9a3a394cbbaa4d4a9d46b7170f3a8f0e 475 SUPERFAMILY SSF81442 11 465 8.9E-123 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_01850 9a3a394cbbaa4d4a9d46b7170f3a8f0e 475 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 15 445 3.3E-115 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_27800 7085e48ffeb7d8f861a2e2f45d59a9c3 422 Pfam PF12704 MacB-like periplasmic core domain 23 249 3.9E-16 T 12-10-2018 IPR025857 MacB-like periplasmic core domain M892_27800 7085e48ffeb7d8f861a2e2f45d59a9c3 422 Pfam PF02687 FtsX-like permease family 315 411 2.1E-9 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 M892_11860 25b9fdc522fbdb0b4735ea425a3f474a 229 SMART SM00862 149 225 7.2E-21 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M892_11860 25b9fdc522fbdb0b4735ea425a3f474a 229 Gene3D G3DSA:3.40.50.2300 1 127 2.7E-37 T 12-10-2018 M892_11860 25b9fdc522fbdb0b4735ea425a3f474a 229 SUPERFAMILY SSF52172 1 125 1.17E-39 T 12-10-2018 IPR011006 CheY-like superfamily M892_11860 25b9fdc522fbdb0b4735ea425a3f474a 229 Gene3D G3DSA:1.10.10.10 128 229 4.5E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_11860 25b9fdc522fbdb0b4735ea425a3f474a 229 SMART SM00448 2 111 5.0E-45 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_11860 25b9fdc522fbdb0b4735ea425a3f474a 229 SUPERFAMILY SSF46894 125 226 2.83E-24 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M892_11860 25b9fdc522fbdb0b4735ea425a3f474a 229 Pfam PF00072 Response regulator receiver domain 4 112 4.4E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_11860 25b9fdc522fbdb0b4735ea425a3f474a 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 225 1.1E-20 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M892_07500 6cc05bdbdbb9f1c72a756cd97e2242ea 306 SUPERFAMILY SSF53850 81 291 5.97E-26 T 12-10-2018 M892_07500 6cc05bdbdbb9f1c72a756cd97e2242ea 306 Gene3D G3DSA:3.40.190.10 101 292 2.0E-47 T 12-10-2018 M892_07500 6cc05bdbdbb9f1c72a756cd97e2242ea 306 Gene3D G3DSA:1.10.10.10 6 96 3.3E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_07500 6cc05bdbdbb9f1c72a756cd97e2242ea 306 SUPERFAMILY SSF46785 9 112 1.13E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_07500 6cc05bdbdbb9f1c72a756cd97e2242ea 306 Gene3D G3DSA:3.40.190.10 161 269 2.0E-47 T 12-10-2018 M892_07500 6cc05bdbdbb9f1c72a756cd97e2242ea 306 Pfam PF03466 LysR substrate binding domain 90 292 4.1E-27 T 12-10-2018 IPR005119 LysR, substrate-binding M892_07500 6cc05bdbdbb9f1c72a756cd97e2242ea 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 64 5.9E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_07500 6cc05bdbdbb9f1c72a756cd97e2242ea 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 6.0E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_07500 6cc05bdbdbb9f1c72a756cd97e2242ea 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 6.0E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_07500 6cc05bdbdbb9f1c72a756cd97e2242ea 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 6.0E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_10935 9f889507bea100e1bf2af67c157f8467 323 Gene3D G3DSA:1.10.10.10 11 99 5.9E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_10935 9f889507bea100e1bf2af67c157f8467 323 Gene3D G3DSA:3.40.190.10 102 315 2.4E-59 T 12-10-2018 M892_10935 9f889507bea100e1bf2af67c157f8467 323 SUPERFAMILY SSF53850 102 316 3.88E-48 T 12-10-2018 M892_10935 9f889507bea100e1bf2af67c157f8467 323 Pfam PF03466 LysR substrate binding domain 107 318 3.6E-30 T 12-10-2018 IPR005119 LysR, substrate-binding M892_10935 9f889507bea100e1bf2af67c157f8467 323 Gene3D G3DSA:3.40.190.10 192 290 2.4E-59 T 12-10-2018 M892_10935 9f889507bea100e1bf2af67c157f8467 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 57 68 2.0E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_10935 9f889507bea100e1bf2af67c157f8467 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 47 2.0E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_10935 9f889507bea100e1bf2af67c157f8467 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 57 2.0E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_10935 9f889507bea100e1bf2af67c157f8467 323 SUPERFAMILY SSF46785 17 96 3.76E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_10935 9f889507bea100e1bf2af67c157f8467 323 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 21 79 4.6E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_11580 a550d34af624c6da610b6542805fbd57 377 Pfam PF00571 CBS domain 261 313 2.7E-5 T 12-10-2018 IPR000644 CBS domain M892_11580 a550d34af624c6da610b6542805fbd57 377 SUPERFAMILY SSF54631 181 315 9.39E-27 T 12-10-2018 M892_11580 a550d34af624c6da610b6542805fbd57 377 Gene3D G3DSA:3.10.580.10 186 315 3.5E-42 T 12-10-2018 M892_11580 a550d34af624c6da610b6542805fbd57 377 Pfam PF01595 Domain of unknown function DUF21 9 177 2.7E-29 T 12-10-2018 IPR002550 CNNM, transmembrane domain M892_03670 57e7379ae55f3e69b4ce663ce73ad641 440 Pfam PF13006 Insertion element 4 transposase N-terminal 22 112 9.2E-21 T 12-10-2018 IPR024473 Transposase, IS4, N-terminal M892_03670 57e7379ae55f3e69b4ce663ce73ad641 440 Pfam PF01609 Transposase DDE domain 132 355 9.2E-19 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_03670 57e7379ae55f3e69b4ce663ce73ad641 440 SUPERFAMILY SSF53098 105 367 1.37E-22 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_23790 06b1b597b99d6309a37859cb5b3a0ae2 106 Gene3D G3DSA:3.30.70.1240 1 104 8.2E-30 T 12-10-2018 IPR023389 DOPA-like superfamily M892_23790 06b1b597b99d6309a37859cb5b3a0ae2 106 Pfam PF08883 Dopa 4,5-dioxygenase family 2 99 4.7E-28 T 12-10-2018 IPR014980 Dopa 4,5-dioxygenase M892_23790 06b1b597b99d6309a37859cb5b3a0ae2 106 PIRSF PIRSF028139 1 106 2.2E-40 T 12-10-2018 IPR014980 Dopa 4,5-dioxygenase M892_23790 06b1b597b99d6309a37859cb5b3a0ae2 106 SUPERFAMILY SSF143410 1 102 5.1E-34 T 12-10-2018 IPR023389 DOPA-like superfamily M892_14600 ff202eaf2bc79f6aa5dd9fb95e014043 1212 Gene3D G3DSA:1.10.3170.10 158 350 1.6E-156 T 12-10-2018 M892_14600 ff202eaf2bc79f6aa5dd9fb95e014043 1212 Gene3D G3DSA:3.90.320.10 904 1201 1.2E-102 T 12-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal M892_14600 ff202eaf2bc79f6aa5dd9fb95e014043 1212 Gene3D G3DSA:3.40.50.300 11 437 1.6E-156 T 12-10-2018 M892_14600 ff202eaf2bc79f6aa5dd9fb95e014043 1212 Gene3D G3DSA:1.10.486.10 587 741 2.3E-154 T 12-10-2018 M892_14600 ff202eaf2bc79f6aa5dd9fb95e014043 1212 Pfam PF13361 UvrD-like helicase C-terminal domain 524 827 2.0E-16 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 M892_14600 ff202eaf2bc79f6aa5dd9fb95e014043 1212 Gene3D G3DSA:3.40.50.300 446 858 2.3E-154 T 12-10-2018 M892_14600 ff202eaf2bc79f6aa5dd9fb95e014043 1212 Pfam PF00580 UvrD/REP helicase N-terminal domain 14 437 7.0E-59 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 M892_14600 ff202eaf2bc79f6aa5dd9fb95e014043 1212 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 13 1194 0.0 T 12-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 M892_14600 ff202eaf2bc79f6aa5dd9fb95e014043 1212 SUPERFAMILY SSF52980 913 1196 1.07E-87 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 M892_14600 ff202eaf2bc79f6aa5dd9fb95e014043 1212 Pfam PF12705 PD-(D/E)XK nuclease superfamily 971 1179 4.1E-7 T 12-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type M892_14600 ff202eaf2bc79f6aa5dd9fb95e014043 1212 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 8 1195 22.807 T 12-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 M892_14600 ff202eaf2bc79f6aa5dd9fb95e014043 1212 SUPERFAMILY SSF52540 16 855 2.3E-110 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_15350 d5163cd1a6cb966248046dca07bce397 246 Pfam PF04344 Chemotaxis phosphatase, CheZ 37 246 9.0E-78 T 12-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 M892_15350 d5163cd1a6cb966248046dca07bce397 246 PIRSF PIRSF002884 13 246 1.1E-91 T 12-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 M892_15350 d5163cd1a6cb966248046dca07bce397 246 Gene3D G3DSA:1.10.287.500 55 189 9.7E-47 T 12-10-2018 M892_15350 d5163cd1a6cb966248046dca07bce397 246 SUPERFAMILY SSF75708 26 245 5.62E-66 T 12-10-2018 M892_12400 a252e2d07614aa8a83b1ebbf5f806a03 877 SUPERFAMILY SSF51621 6 877 0.0 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 M892_12400 a252e2d07614aa8a83b1ebbf5f806a03 877 Gene3D G3DSA:1.20.1440.90 302 387 1.1E-23 T 12-10-2018 M892_12400 a252e2d07614aa8a83b1ebbf5f806a03 877 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 1 877 17.964 T 12-10-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 M892_12400 a252e2d07614aa8a83b1ebbf5f806a03 877 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 535 547 - T 12-10-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 M892_12400 a252e2d07614aa8a83b1ebbf5f806a03 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 245 260 1.9E-67 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 M892_12400 a252e2d07614aa8a83b1ebbf5f806a03 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 186 202 1.9E-67 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 M892_12400 a252e2d07614aa8a83b1ebbf5f806a03 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 707 733 1.9E-67 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 M892_12400 a252e2d07614aa8a83b1ebbf5f806a03 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 533 553 1.9E-67 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 M892_12400 a252e2d07614aa8a83b1ebbf5f806a03 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 575 604 1.9E-67 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 M892_12400 a252e2d07614aa8a83b1ebbf5f806a03 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 133 146 1.9E-67 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 M892_12400 a252e2d07614aa8a83b1ebbf5f806a03 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 384 404 1.9E-67 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 M892_12400 a252e2d07614aa8a83b1ebbf5f806a03 877 Pfam PF00311 Phosphoenolpyruvate carboxylase 129 877 1.3E-288 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 M892_12400 a252e2d07614aa8a83b1ebbf5f806a03 877 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 134 145 - T 12-10-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 M892_26605 4a7f7f1294a56b963a0fbc3e85ec4696 144 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 7 142 3.8E-40 T 12-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 M892_26605 4a7f7f1294a56b963a0fbc3e85ec4696 144 Pfam PF00460 Flagella basal body rod protein 11 32 1.2E-5 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 M892_26605 4a7f7f1294a56b963a0fbc3e85ec4696 144 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 95 140 4.0E-9 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain M892_25165 af8b651372d6fa7c0df9068bda9cf4f3 54 Pfam PF01679 Proteolipid membrane potential modulator 6 52 2.3E-20 T 12-10-2018 IPR000612 Proteolipid membrane potential modulator GO:0016021 M892_25165 af8b651372d6fa7c0df9068bda9cf4f3 54 ProSitePatterns PS01309 Uncharacterized protein family UPF0057 signature. 10 25 - T 12-10-2018 IPR000612 Proteolipid membrane potential modulator GO:0016021 M892_20685 51bb1373fbc4d2addb54518c9c8d0095 229 PIRSF PIRSF006324 20 228 4.8E-57 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 M892_20685 51bb1373fbc4d2addb54518c9c8d0095 229 Pfam PF01810 LysE type translocator 35 224 1.8E-28 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 M892_19255 bfa2fe1a6f8720ff475714b500fddceb 212 Gene3D G3DSA:3.40.190.10 2 203 1.2E-26 T 12-10-2018 M892_19255 bfa2fe1a6f8720ff475714b500fddceb 212 SUPERFAMILY SSF53850 3 207 3.39E-23 T 12-10-2018 M892_19255 bfa2fe1a6f8720ff475714b500fddceb 212 Pfam PF03466 LysR substrate binding domain 4 206 2.8E-11 T 12-10-2018 IPR005119 LysR, substrate-binding M892_19255 bfa2fe1a6f8720ff475714b500fddceb 212 Gene3D G3DSA:3.40.190.10 73 174 1.2E-26 T 12-10-2018 M892_12540 8d8b0476e7d5bb5d30dd665afedb5d1d 466 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 20 457 1.0E-174 T 12-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 M892_12540 8d8b0476e7d5bb5d30dd665afedb5d1d 466 Gene3D G3DSA:1.10.860.10 12 176 4.5E-53 T 12-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal M892_12540 8d8b0476e7d5bb5d30dd665afedb5d1d 466 Pfam PF03796 DnaB-like helicase C terminal domain 199 455 6.6E-112 T 12-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 M892_12540 8d8b0476e7d5bb5d30dd665afedb5d1d 466 Pfam PF00772 DnaB-like helicase N terminal domain 20 121 4.7E-35 T 12-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 M892_12540 8d8b0476e7d5bb5d30dd665afedb5d1d 466 SUPERFAMILY SSF52540 197 449 4.72E-51 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_12540 8d8b0476e7d5bb5d30dd665afedb5d1d 466 SUPERFAMILY SSF48024 18 129 4.58E-37 T 12-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 M892_12540 8d8b0476e7d5bb5d30dd665afedb5d1d 466 Gene3D G3DSA:3.40.50.300 177 456 1.3E-105 T 12-10-2018 M892_10560 2395bbcf006bdd9012f013f8625731c1 118 Gene3D G3DSA:3.30.230.10 1 118 2.3E-41 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M892_10560 2395bbcf006bdd9012f013f8625731c1 118 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 16 104 2.0E-45 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 M892_10560 2395bbcf006bdd9012f013f8625731c1 118 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 56 70 - T 12-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 M892_10560 2395bbcf006bdd9012f013f8625731c1 118 SUPERFAMILY SSF54211 4 114 8.09E-31 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold M892_10560 2395bbcf006bdd9012f013f8625731c1 118 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 6 113 3.2E-28 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 M892_10560 2395bbcf006bdd9012f013f8625731c1 118 Pfam PF00825 Ribonuclease P 6 112 3.9E-33 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 M892_10560 2395bbcf006bdd9012f013f8625731c1 118 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 6 115 17.51 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 M892_15450 f09567eb130679866506eb9c3d342a68 197 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 36 185 9.0E-23 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 M892_15450 f09567eb130679866506eb9c3d342a68 197 Pfam PF04542 Sigma-70 region 2 39 105 2.2E-17 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 M892_15450 f09567eb130679866506eb9c3d342a68 197 SUPERFAMILY SSF88659 126 186 2.99E-12 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like M892_15450 f09567eb130679866506eb9c3d342a68 197 SUPERFAMILY SSF88946 33 115 5.89E-21 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 M892_15450 f09567eb130679866506eb9c3d342a68 197 Gene3D G3DSA:1.10.10.10 124 187 6.9E-14 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_15450 f09567eb130679866506eb9c3d342a68 197 Gene3D G3DSA:1.10.1740.10 25 107 8.5E-19 T 12-10-2018 M892_15450 f09567eb130679866506eb9c3d342a68 197 Pfam PF08281 Sigma-70, region 4 129 181 1.8E-10 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 M892_15450 f09567eb130679866506eb9c3d342a68 197 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 61 92 - T 12-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 M892_11850 771385e562d088238dde740f21c54814 202 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 5.7E-22 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 M892_11850 771385e562d088238dde740f21c54814 202 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 5.7E-22 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 M892_11850 771385e562d088238dde740f21c54814 202 PRINTS PR01703 Manganese superoxide dismutase signature 68 81 5.7E-22 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 M892_11850 771385e562d088238dde740f21c54814 202 PRINTS PR01703 Manganese superoxide dismutase signature 161 173 5.7E-22 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 M892_11850 771385e562d088238dde740f21c54814 202 PRINTS PR01703 Manganese superoxide dismutase signature 121 129 5.7E-22 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 M892_11850 771385e562d088238dde740f21c54814 202 SUPERFAMILY SSF46609 1 90 9.43E-30 T 12-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 M892_11850 771385e562d088238dde740f21c54814 202 Gene3D G3DSA:1.10.287.990 20 83 1.7E-23 T 12-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 M892_11850 771385e562d088238dde740f21c54814 202 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 85 1.9E-26 T 12-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 M892_11850 771385e562d088238dde740f21c54814 202 PIRSF PIRSF000349 1 202 2.3E-79 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 M892_11850 771385e562d088238dde740f21c54814 202 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 92 195 1.1E-39 T 12-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 M892_11850 771385e562d088238dde740f21c54814 202 SUPERFAMILY SSF54719 84 200 1.44E-42 T 12-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 M892_11850 771385e562d088238dde740f21c54814 202 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 163 170 - T 12-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 M892_11850 771385e562d088238dde740f21c54814 202 Gene3D G3DSA:2.40.500.20 84 201 4.0E-47 T 12-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 M892_10535 079ab8aee6a0f4b18f0ce20e3286845e 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 1.3E-108 T 12-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 M892_10535 079ab8aee6a0f4b18f0ce20e3286845e 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 130 243 7.8E-36 T 12-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 M892_10535 079ab8aee6a0f4b18f0ce20e3286845e 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 245 365 3.5E-37 T 12-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 M892_10535 079ab8aee6a0f4b18f0ce20e3286845e 366 SUPERFAMILY SSF55979 245 366 8.03E-36 T 12-10-2018 M892_10535 079ab8aee6a0f4b18f0ce20e3286845e 366 Gene3D G3DSA:3.10.150.10 1 122 4.3E-42 T 12-10-2018 M892_10535 079ab8aee6a0f4b18f0ce20e3286845e 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 119 2.0E-38 T 12-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 M892_10535 079ab8aee6a0f4b18f0ce20e3286845e 366 SUPERFAMILY SSF55979 126 244 3.38E-28 T 12-10-2018 M892_10535 079ab8aee6a0f4b18f0ce20e3286845e 366 Gene3D G3DSA:3.10.150.10 124 247 4.1E-36 T 12-10-2018 M892_10535 079ab8aee6a0f4b18f0ce20e3286845e 366 PIRSF PIRSF000804 1 366 2.0E-117 T 12-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 M892_10535 079ab8aee6a0f4b18f0ce20e3286845e 366 SUPERFAMILY SSF55979 1 118 1.36E-30 T 12-10-2018 M892_10535 079ab8aee6a0f4b18f0ce20e3286845e 366 Gene3D G3DSA:3.10.150.10 248 366 9.6E-39 T 12-10-2018 M892_10535 079ab8aee6a0f4b18f0ce20e3286845e 366 SMART SM00480 17 362 1.0E-149 T 12-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 M892_02580 85902ad4b30d3855b473c0347e18ddfd 388 Gene3D G3DSA:3.40.50.150 97 377 4.5E-77 T 12-10-2018 M892_02580 85902ad4b30d3855b473c0347e18ddfd 388 SUPERFAMILY SSF53335 104 377 1.27E-31 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M892_02580 85902ad4b30d3855b473c0347e18ddfd 388 Pfam PF05971 Protein of unknown function (DUF890) 63 377 2.7E-130 T 12-10-2018 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 M892_02580 85902ad4b30d3855b473c0347e18ddfd 388 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 64 379 54.534 T 12-10-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 M892_02580 85902ad4b30d3855b473c0347e18ddfd 388 PIRSF PIRSF029038 53 388 1.6E-160 T 12-10-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 M892_14485 91928bfd5d7536b953ac411f68fd591b 586 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 163 307 1.3E-13 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain M892_14485 91928bfd5d7536b953ac411f68fd591b 586 Pfam PF12793 Sugar transport-related sRNA regulator N-term 7 118 6.2E-26 T 12-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain M892_14485 91928bfd5d7536b953ac411f68fd591b 586 SUPERFAMILY SSF53850 126 586 3.44E-50 T 12-10-2018 M892_14485 91928bfd5d7536b953ac411f68fd591b 586 Gene3D G3DSA:3.40.190.10 105 317 1.6E-24 T 12-10-2018 M892_01360 b78d9a205ecb816733ddedcf5a15ad9b 140 Gene3D G3DSA:3.30.700.10 6 125 2.5E-5 T 12-10-2018 M892_01360 b78d9a205ecb816733ddedcf5a15ad9b 140 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 26 4.5E-7 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M892_01360 b78d9a205ecb816733ddedcf5a15ad9b 140 SUPERFAMILY SSF54523 6 69 4.32E-7 T 12-10-2018 M892_01360 b78d9a205ecb816733ddedcf5a15ad9b 140 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 25 8.3E-7 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M892_27450 54d19d52936c27912b48696c0e7ca62b 612 SMART SM00382 386 577 4.3E-19 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_27450 54d19d52936c27912b48696c0e7ca62b 612 SUPERFAMILY SSF52540 353 601 5.33E-89 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_27450 54d19d52936c27912b48696c0e7ca62b 612 ProSitePatterns PS00211 ABC transporters family signature. 503 517 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_27450 54d19d52936c27912b48696c0e7ca62b 612 Gene3D G3DSA:3.40.50.300 351 604 4.2E-92 T 12-10-2018 M892_27450 54d19d52936c27912b48696c0e7ca62b 612 SUPERFAMILY SSF90123 28 344 1.29E-50 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 M892_27450 54d19d52936c27912b48696c0e7ca62b 612 Pfam PF00005 ABC transporter 378 531 1.9E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_27450 54d19d52936c27912b48696c0e7ca62b 612 Pfam PF00664 ABC transporter transmembrane region 41 308 1.7E-17 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 M892_27450 54d19d52936c27912b48696c0e7ca62b 612 Gene3D G3DSA:1.20.1560.10 8 335 1.1E-24 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 M892_24900 8e084d098eac03a24439e21cad754bcb 310 SUPERFAMILY SSF51735 1 165 1.39E-38 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_24900 8e084d098eac03a24439e21cad754bcb 310 Gene3D G3DSA:3.40.50.720 1 118 3.4E-27 T 12-10-2018 M892_24900 8e084d098eac03a24439e21cad754bcb 310 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 1 118 3.7E-14 T 12-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 M892_24900 8e084d098eac03a24439e21cad754bcb 310 Gene3D G3DSA:3.30.360.10 119 310 2.9E-55 T 12-10-2018 M892_24900 8e084d098eac03a24439e21cad754bcb 310 SUPERFAMILY SSF55347 121 264 9.81E-45 T 12-10-2018 M892_05460 ec6d4e8110a959c8b6854d6ba802502f 235 SUPERFAMILY SSF52540 4 228 5.06E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_05460 ec6d4e8110a959c8b6854d6ba802502f 235 SMART SM00382 33 221 1.2E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_05460 ec6d4e8110a959c8b6854d6ba802502f 235 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_05460 ec6d4e8110a959c8b6854d6ba802502f 235 Gene3D G3DSA:3.40.50.300 1 235 3.6E-66 T 12-10-2018 M892_05460 ec6d4e8110a959c8b6854d6ba802502f 235 Pfam PF00005 ABC transporter 24 172 3.9E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_05460 ec6d4e8110a959c8b6854d6ba802502f 235 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 4 223 7.8E-111 T 12-10-2018 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0016020|GO:0044873 M892_08795 140be83f6fc44e576b52f387f75eab6b 466 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 465 6.9E-267 T 12-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 M892_08795 140be83f6fc44e576b52f387f75eab6b 466 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 466 60.766 T 12-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 M892_08795 140be83f6fc44e576b52f387f75eab6b 466 ProSitePatterns PS01244 Aconitase family signature 2. 399 412 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 M892_08795 140be83f6fc44e576b52f387f75eab6b 466 ProSitePatterns PS00450 Aconitase family signature 1. 339 355 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 M892_08795 140be83f6fc44e576b52f387f75eab6b 466 Gene3D G3DSA:3.30.499.10 327 466 3.8E-49 T 12-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 M892_08795 140be83f6fc44e576b52f387f75eab6b 466 Gene3D G3DSA:3.30.499.20 4 286 1.1E-99 T 12-10-2018 M892_08795 140be83f6fc44e576b52f387f75eab6b 466 PRINTS PR00415 Aconitase family signature 82 95 9.0E-51 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 M892_08795 140be83f6fc44e576b52f387f75eab6b 466 PRINTS PR00415 Aconitase family signature 286 300 9.0E-51 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 M892_08795 140be83f6fc44e576b52f387f75eab6b 466 PRINTS PR00415 Aconitase family signature 133 148 9.0E-51 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 M892_08795 140be83f6fc44e576b52f387f75eab6b 466 PRINTS PR00415 Aconitase family signature 209 222 9.0E-51 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 M892_08795 140be83f6fc44e576b52f387f75eab6b 466 PRINTS PR00415 Aconitase family signature 119 132 9.0E-51 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 M892_08795 140be83f6fc44e576b52f387f75eab6b 466 PRINTS PR00415 Aconitase family signature 108 116 9.0E-51 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 M892_08795 140be83f6fc44e576b52f387f75eab6b 466 PRINTS PR00415 Aconitase family signature 195 208 9.0E-51 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 M892_08795 140be83f6fc44e576b52f387f75eab6b 466 PRINTS PR00415 Aconitase family signature 399 412 9.0E-51 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 M892_08795 140be83f6fc44e576b52f387f75eab6b 466 PRINTS PR00415 Aconitase family signature 343 354 9.0E-51 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 M892_08795 140be83f6fc44e576b52f387f75eab6b 466 SUPERFAMILY SSF53732 1 465 6.67E-166 T 12-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 M892_08795 140be83f6fc44e576b52f387f75eab6b 466 Pfam PF00330 Aconitase family (aconitate hydratase) 7 457 1.2E-160 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 M892_09445 dccb3510653bb035bf4e4cc464b51dbe 329 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 15 304 1.4E-76 T 12-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 M892_09445 dccb3510653bb035bf4e4cc464b51dbe 329 Hamap MF_01944 Lipid A biosynthesis myristoyltransferase [lpxM]. 7 311 48.207 T 12-10-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243 M892_09445 dccb3510653bb035bf4e4cc464b51dbe 329 PIRSF PIRSF026649 12 313 1.2E-82 T 12-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 M892_09445 dccb3510653bb035bf4e4cc464b51dbe 329 TIGRFAM TIGR02208 lipid_A_msbB: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 13 312 1.0E-107 T 12-10-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243 M892_12525 5535257d2b31225bf4f66bb579f60fea 150 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 12-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_12525 5535257d2b31225bf4f66bb579f60fea 150 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 148 9.0E-55 T 12-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_12525 5535257d2b31225bf4f66bb579f60fea 150 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 148 2.4E-25 T 12-10-2018 IPR020069 Ribosomal protein L9, C-terminal M892_12525 5535257d2b31225bf4f66bb579f60fea 150 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 1.7E-21 T 12-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_12525 5535257d2b31225bf4f66bb579f60fea 150 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 26.142 T 12-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_12525 5535257d2b31225bf4f66bb579f60fea 150 Gene3D G3DSA:3.40.5.10 1 50 9.2E-24 T 12-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_12525 5535257d2b31225bf4f66bb579f60fea 150 SUPERFAMILY SSF55653 60 148 1.02E-25 T 12-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily M892_12525 5535257d2b31225bf4f66bb579f60fea 150 Gene3D G3DSA:3.10.430.100 61 149 1.3E-30 T 12-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily M892_12525 5535257d2b31225bf4f66bb579f60fea 150 SUPERFAMILY SSF55658 1 57 2.27E-19 T 12-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal M892_15100 d5c82291da88a518a202cc181026df1a 484 SMART SM00028 426 459 100.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_15100 d5c82291da88a518a202cc181026df1a 484 SMART SM00028 307 340 30.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_15100 d5c82291da88a518a202cc181026df1a 484 SMART SM00028 341 374 18.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_15100 d5c82291da88a518a202cc181026df1a 484 Gene3D G3DSA:1.25.40.10 282 469 4.4E-19 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_15100 d5c82291da88a518a202cc181026df1a 484 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 3 483 39.526 T 12-10-2018 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 M892_15100 d5c82291da88a518a202cc181026df1a 484 Pfam PF13432 Tetratricopeptide repeat 303 341 0.011 T 12-10-2018 M892_15100 d5c82291da88a518a202cc181026df1a 484 Pfam PF14559 Tetratricopeptide repeat 352 417 3.6E-10 T 12-10-2018 M892_15100 d5c82291da88a518a202cc181026df1a 484 Gene3D G3DSA:3.30.2010.10 73 148 9.7E-7 T 12-10-2018 M892_15100 d5c82291da88a518a202cc181026df1a 484 Pfam PF01435 Peptidase family M48 70 252 1.1E-26 T 12-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 M892_15100 d5c82291da88a518a202cc181026df1a 484 SUPERFAMILY SSF48452 311 455 1.96E-17 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_11230 b8fc560df9a23c43971cd0f6c4148930 126 SUPERFAMILY SSF54403 43 115 4.04E-17 T 12-10-2018 M892_11230 b8fc560df9a23c43971cd0f6c4148930 126 Gene3D G3DSA:3.10.450.10 40 124 5.1E-10 T 12-10-2018 M892_11230 b8fc560df9a23c43971cd0f6c4148930 126 Pfam PF00031 Cystatin domain 52 106 2.0E-9 T 12-10-2018 IPR000010 Cystatin domain GO:0004869 M892_02705 3e25ec78a9326f5d3d7a4a55da87a831 473 Pfam PF00929 Exonuclease 11 190 1.0E-22 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III M892_02705 3e25ec78a9326f5d3d7a4a55da87a831 473 Gene3D G3DSA:3.30.420.10 1 199 6.1E-73 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M892_02705 3e25ec78a9326f5d3d7a4a55da87a831 473 SUPERFAMILY SSF53098 7 471 6.28E-139 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_02705 3e25ec78a9326f5d3d7a4a55da87a831 473 SMART SM00479 8 201 0.0034 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III M892_02705 3e25ec78a9326f5d3d7a4a55da87a831 473 Pfam PF08411 Exonuclease C-terminal 210 469 7.7E-103 T 12-10-2018 IPR013620 Exodeoxyribonuclease I, C-terminal GO:0006281|GO:0008852 M892_02705 3e25ec78a9326f5d3d7a4a55da87a831 473 PIRSF PIRSF000977 1 473 2.6E-197 T 12-10-2018 IPR023607 Exodeoxyribonuclease I GO:0004529 M892_02705 3e25ec78a9326f5d3d7a4a55da87a831 473 Gene3D G3DSA:2.30.30.450 212 350 2.3E-55 T 12-10-2018 IPR038649 Exonuclease I, SH3-like domain superfamily M892_02705 3e25ec78a9326f5d3d7a4a55da87a831 473 Gene3D G3DSA:1.20.1280.70 357 418 2.6E-27 T 12-10-2018 M892_19335 5cf614072c5af3b3c3094f63daa99637 526 SUPERFAMILY SSF52540 303 519 3.1E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_19335 5cf614072c5af3b3c3094f63daa99637 526 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_19335 5cf614072c5af3b3c3094f63daa99637 526 Pfam PF12848 ABC transporter 216 300 3.0E-22 T 12-10-2018 IPR032781 ABC-transporter extension domain M892_19335 5cf614072c5af3b3c3094f63daa99637 526 Pfam PF00005 ABC transporter 331 459 1.7E-19 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_19335 5cf614072c5af3b3c3094f63daa99637 526 SMART SM00382 336 504 2.3E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_19335 5cf614072c5af3b3c3094f63daa99637 526 SMART SM00382 18 230 4.5E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_19335 5cf614072c5af3b3c3094f63daa99637 526 SUPERFAMILY SSF52540 3 230 1.65E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_19335 5cf614072c5af3b3c3094f63daa99637 526 Gene3D G3DSA:3.40.50.300 2 273 2.1E-55 T 12-10-2018 M892_19335 5cf614072c5af3b3c3094f63daa99637 526 Pfam PF00005 ABC transporter 10 176 3.9E-20 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_19335 5cf614072c5af3b3c3094f63daa99637 526 Gene3D G3DSA:3.40.50.300 274 526 1.0E-52 T 12-10-2018 M892_16155 d8f79b0a5fd4634d2b42f7978c15e12a 192 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 2.1E-89 T 12-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 M892_16155 d8f79b0a5fd4634d2b42f7978c15e12a 192 Hamap MF_00459 Ion-translocating oxidoreductase complex subunit A [rsxA]. 2 191 26.236 T 12-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 M892_16155 d8f79b0a5fd4634d2b42f7978c15e12a 192 PIRSF PIRSF006102 1 192 7.5E-64 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 M892_16155 d8f79b0a5fd4634d2b42f7978c15e12a 192 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 2.6E-61 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 M892_06305 d89a70a8a2e3ff042359ec615b5d5573 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 200 214 1.2E-5 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 M892_06305 d89a70a8a2e3ff042359ec615b5d5573 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 39 54 1.2E-5 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 M892_06305 d89a70a8a2e3ff042359ec615b5d5573 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 82 95 1.2E-5 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 M892_06305 d89a70a8a2e3ff042359ec615b5d5573 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 96 109 1.2E-5 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 M892_06305 d89a70a8a2e3ff042359ec615b5d5573 255 PRINTS PR00412 Epoxide hydrolase signature 96 109 6.9E-6 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 M892_06305 d89a70a8a2e3ff042359ec615b5d5573 255 PRINTS PR00412 Epoxide hydrolase signature 82 95 6.9E-6 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 M892_06305 d89a70a8a2e3ff042359ec615b5d5573 255 PRINTS PR00412 Epoxide hydrolase signature 230 252 6.9E-6 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 M892_06305 d89a70a8a2e3ff042359ec615b5d5573 255 PRINTS PR00412 Epoxide hydrolase signature 39 54 6.9E-6 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 M892_06305 d89a70a8a2e3ff042359ec615b5d5573 255 Pfam PF12697 Alpha/beta hydrolase family 16 247 1.4E-24 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 M892_06305 d89a70a8a2e3ff042359ec615b5d5573 255 SUPERFAMILY SSF53474 5 254 1.27E-51 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_06305 d89a70a8a2e3ff042359ec615b5d5573 255 Gene3D G3DSA:3.40.50.1820 3 254 3.1E-66 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_20315 6d0eef90e7f6f4498dfbe79c9f358384 283 ProSitePatterns PS00146 Beta-lactamase class-A active site. 58 73 - T 12-10-2018 IPR023650 Beta-lactamase, class-A active site KEGG: 00311+3.5.2.6 M892_20315 6d0eef90e7f6f4498dfbe79c9f358384 283 Pfam PF13354 Beta-lactamase enzyme family 46 252 2.6E-33 T 12-10-2018 M892_20315 6d0eef90e7f6f4498dfbe79c9f358384 283 PRINTS PR00118 Beta-lactamase class A signature 25 49 3.9E-56 T 12-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 M892_20315 6d0eef90e7f6f4498dfbe79c9f358384 283 PRINTS PR00118 Beta-lactamase class A signature 98 123 3.9E-56 T 12-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 M892_20315 6d0eef90e7f6f4498dfbe79c9f358384 283 PRINTS PR00118 Beta-lactamase class A signature 213 228 3.9E-56 T 12-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 M892_20315 6d0eef90e7f6f4498dfbe79c9f358384 283 PRINTS PR00118 Beta-lactamase class A signature 160 185 3.9E-56 T 12-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 M892_20315 6d0eef90e7f6f4498dfbe79c9f358384 283 PRINTS PR00118 Beta-lactamase class A signature 196 211 3.9E-56 T 12-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 M892_20315 6d0eef90e7f6f4498dfbe79c9f358384 283 PRINTS PR00118 Beta-lactamase class A signature 56 73 3.9E-56 T 12-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 M892_20315 6d0eef90e7f6f4498dfbe79c9f358384 283 PRINTS PR00118 Beta-lactamase class A signature 134 158 3.9E-56 T 12-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 M892_20315 6d0eef90e7f6f4498dfbe79c9f358384 283 SUPERFAMILY SSF56601 21 281 1.05E-69 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like M892_20315 6d0eef90e7f6f4498dfbe79c9f358384 283 Gene3D G3DSA:3.40.710.10 20 281 2.3E-66 T 12-10-2018 M892_11820 a6d116b4ca496384d487d2079a733cde 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 3.6E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_11820 a6d116b4ca496384d487d2079a733cde 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 3.6E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_11820 a6d116b4ca496384d487d2079a733cde 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 3.6E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_11820 a6d116b4ca496384d487d2079a733cde 211 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 7.0E-20 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_11820 a6d116b4ca496384d487d2079a733cde 211 Gene3D G3DSA:1.10.10.10 148 211 5.0E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_11820 a6d116b4ca496384d487d2079a733cde 211 SUPERFAMILY SSF52172 4 173 7.39E-27 T 12-10-2018 IPR011006 CheY-like superfamily M892_11820 a6d116b4ca496384d487d2079a733cde 211 SMART SM00448 5 119 6.6E-21 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_11820 a6d116b4ca496384d487d2079a733cde 211 SMART SM00421 147 204 7.3E-23 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_11820 a6d116b4ca496384d487d2079a733cde 211 Pfam PF00072 Response regulator receiver domain 7 120 4.0E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_11820 a6d116b4ca496384d487d2079a733cde 211 Gene3D G3DSA:3.40.50.2300 3 132 2.1E-27 T 12-10-2018 M892_11820 a6d116b4ca496384d487d2079a733cde 211 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_03770 3da83904239dbb4e6e01bb7380a8e67d 158 Pfam PF01047 MarR family 31 89 2.0E-16 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M892_03770 3da83904239dbb4e6e01bb7380a8e67d 158 SUPERFAMILY SSF46785 4 141 3.08E-31 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_03770 3da83904239dbb4e6e01bb7380a8e67d 158 Gene3D G3DSA:1.10.10.10 1 140 4.9E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_03770 3da83904239dbb4e6e01bb7380a8e67d 158 SMART SM00347 24 124 6.4E-19 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M892_11885 ca409f485a2e4e6368793fe3328e0377 320 ProSitePatterns PS00433 Phosphofructokinase signature. 244 262 - T 12-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 M892_11885 ca409f485a2e4e6368793fe3328e0377 320 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 4 301 1.5E-130 T 12-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 M892_11885 ca409f485a2e4e6368793fe3328e0377 320 PIRSF PIRSF000532 1 320 7.0E-128 T 12-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 M892_11885 ca409f485a2e4e6368793fe3328e0377 320 Gene3D G3DSA:3.40.50.450 4 287 1.4E-117 T 12-10-2018 M892_11885 ca409f485a2e4e6368793fe3328e0377 320 Pfam PF00365 Phosphofructokinase 4 276 4.6E-110 T 12-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 M892_11885 ca409f485a2e4e6368793fe3328e0377 320 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 2 320 47.439 T 12-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 M892_11885 ca409f485a2e4e6368793fe3328e0377 320 Gene3D G3DSA:3.40.50.460 143 252 1.4E-117 T 12-10-2018 M892_11885 ca409f485a2e4e6368793fe3328e0377 320 SUPERFAMILY SSF53784 3 311 4.71E-113 T 12-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 M892_11885 ca409f485a2e4e6368793fe3328e0377 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 213 225 6.8E-83 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 M892_11885 ca409f485a2e4e6368793fe3328e0377 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 177 194 6.8E-83 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 M892_11885 ca409f485a2e4e6368793fe3328e0377 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 121 138 6.8E-83 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 M892_11885 ca409f485a2e4e6368793fe3328e0377 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 240 262 6.8E-83 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 M892_11885 ca409f485a2e4e6368793fe3328e0377 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 159 175 6.8E-83 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 M892_11885 ca409f485a2e4e6368793fe3328e0377 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 94 110 6.8E-83 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 M892_11885 ca409f485a2e4e6368793fe3328e0377 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 139 157 6.8E-83 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 M892_11885 ca409f485a2e4e6368793fe3328e0377 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 32 45 6.8E-83 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 M892_11885 ca409f485a2e4e6368793fe3328e0377 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 7 26 6.8E-83 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 M892_18805 e83f4fcad7c6254cda15a2e7ab81d34b 721 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 42 443 1.5E-97 T 12-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 M892_18805 e83f4fcad7c6254cda15a2e7ab81d34b 721 Gene3D G3DSA:2.130.10.120 111 445 2.4E-249 T 12-10-2018 M892_18805 e83f4fcad7c6254cda15a2e7ab81d34b 721 SUPERFAMILY SSF50993 39 451 2.62E-94 T 12-10-2018 M892_18805 e83f4fcad7c6254cda15a2e7ab81d34b 721 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 572 592 1.5E-50 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 M892_18805 e83f4fcad7c6254cda15a2e7ab81d34b 721 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 488 506 1.5E-50 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 M892_18805 e83f4fcad7c6254cda15a2e7ab81d34b 721 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 648 670 1.5E-50 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 M892_18805 e83f4fcad7c6254cda15a2e7ab81d34b 721 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 514 538 1.5E-50 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 M892_18805 e83f4fcad7c6254cda15a2e7ab81d34b 721 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 542 561 1.5E-50 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 M892_18805 e83f4fcad7c6254cda15a2e7ab81d34b 721 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 630 645 1.5E-50 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 M892_18805 e83f4fcad7c6254cda15a2e7ab81d34b 721 Gene3D G3DSA:3.40.50.1820 60 713 2.4E-249 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_18805 e83f4fcad7c6254cda15a2e7ab81d34b 721 SUPERFAMILY SSF53474 455 699 1.41E-40 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_18805 e83f4fcad7c6254cda15a2e7ab81d34b 721 Pfam PF00326 Prolyl oligopeptidase family 504 719 2.6E-69 T 12-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 M892_07695 4322e4e2d07c75fb678eb94d53dbfb9b 437 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 11 258 2.5E-114 T 12-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 M892_07695 4322e4e2d07c75fb678eb94d53dbfb9b 437 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 259 437 1.4E-89 T 12-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 M892_07695 4322e4e2d07c75fb678eb94d53dbfb9b 437 SUPERFAMILY SSF51621 6 437 2.15E-153 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 M892_07695 4322e4e2d07c75fb678eb94d53dbfb9b 437 Gene3D G3DSA:3.20.20.60 2 420 3.8E-182 T 12-10-2018 M892_07695 4322e4e2d07c75fb678eb94d53dbfb9b 437 PIRSF PIRSF001362 1 437 1.0E-223 T 12-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 M892_07695 4322e4e2d07c75fb678eb94d53dbfb9b 437 ProSitePatterns PS00161 Isocitrate lyase signature. 196 201 - T 12-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 M892_07695 4322e4e2d07c75fb678eb94d53dbfb9b 437 Pfam PF00463 Isocitrate lyase family 15 259 8.4E-62 T 12-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 M892_13535 e3e188ab80f8f7d0ab236a31206396c3 160 Pfam PF02464 Competence-damaged protein 6 158 8.0E-58 T 12-10-2018 IPR008136 CinA, C-terminal M892_13535 e3e188ab80f8f7d0ab236a31206396c3 160 Gene3D G3DSA:3.90.950.20 1 160 9.1E-59 T 12-10-2018 IPR036653 CinA-like, C-terminal M892_13535 e3e188ab80f8f7d0ab236a31206396c3 160 SUPERFAMILY SSF142433 5 159 1.29E-55 T 12-10-2018 IPR036653 CinA-like, C-terminal M892_13535 e3e188ab80f8f7d0ab236a31206396c3 160 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 12 158 2.4E-51 T 12-10-2018 IPR008136 CinA, C-terminal M892_20320 872627342bb85c4073eb14840d6eb6ae 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 60 3.7E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_20320 872627342bb85c4073eb14840d6eb6ae 292 Gene3D G3DSA:3.40.190.290 90 289 6.7E-22 T 12-10-2018 M892_20320 872627342bb85c4073eb14840d6eb6ae 292 SUPERFAMILY SSF46785 1 109 3.27E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_20320 872627342bb85c4073eb14840d6eb6ae 292 Gene3D G3DSA:1.10.10.10 1 89 2.2E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_20320 872627342bb85c4073eb14840d6eb6ae 292 SUPERFAMILY SSF53850 86 285 6.92E-26 T 12-10-2018 M892_20320 872627342bb85c4073eb14840d6eb6ae 292 Pfam PF03466 LysR substrate binding domain 85 284 1.2E-26 T 12-10-2018 IPR005119 LysR, substrate-binding M892_18410 4d172cfd267d94fecf8cf09cbeae051d 199 Hamap MF_00587 tRNA (pseudouridine(54)-N(1))-methyltransferase [trmY]. 1 198 27.829 T 12-10-2018 IPR007158 tRNA (pseudouridine(54)-N(1))-methyltransferase, TrmY GO:0008175 M892_18410 4d172cfd267d94fecf8cf09cbeae051d 199 Pfam PF04013 Putative SAM-dependent RNA methyltransferase 1 198 7.0E-66 T 12-10-2018 IPR007158 tRNA (pseudouridine(54)-N(1))-methyltransferase, TrmY GO:0008175 M892_18410 4d172cfd267d94fecf8cf09cbeae051d 199 Gene3D G3DSA:3.40.1280.10 1 199 2.0E-58 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal M892_18410 4d172cfd267d94fecf8cf09cbeae051d 199 SUPERFAMILY SSF75217 1 198 2.35E-67 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases M892_13815 2b48d653333e4a66de3798339e3e7778 324 Gene3D G3DSA:3.40.50.300 9 255 3.5E-65 T 12-10-2018 M892_13815 2b48d653333e4a66de3798339e3e7778 324 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_13815 2b48d653333e4a66de3798339e3e7778 324 Pfam PF00005 ABC transporter 39 183 6.2E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_13815 2b48d653333e4a66de3798339e3e7778 324 SMART SM00382 48 231 2.8E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_13815 2b48d653333e4a66de3798339e3e7778 324 SUPERFAMILY SSF52540 21 250 5.33E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_15145 13a816d4bdb3dba7830231b9bb108aea 232 Gene3D G3DSA:3.30.1380.10 4 189 3.4E-33 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 M892_15145 13a816d4bdb3dba7830231b9bb108aea 232 SUPERFAMILY SSF55166 20 176 1.26E-19 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 M892_15145 13a816d4bdb3dba7830231b9bb108aea 232 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 25 177 2.9E-35 T 12-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 M892_17070 0fa8aabe8a95eeb5b219fa9d49d6c259 396 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 6 388 2.5E-194 T 12-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 M892_17070 0fa8aabe8a95eeb5b219fa9d49d6c259 396 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 79 93 - T 12-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 M892_17070 0fa8aabe8a95eeb5b219fa9d49d6c259 396 PIRSF PIRSF001413 1 396 5.2E-168 T 12-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 M892_17070 0fa8aabe8a95eeb5b219fa9d49d6c259 396 Gene3D G3DSA:3.40.50.1100 53 383 1.7E-183 T 12-10-2018 M892_17070 0fa8aabe8a95eeb5b219fa9d49d6c259 396 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 51 373 1.3E-48 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme M892_17070 0fa8aabe8a95eeb5b219fa9d49d6c259 396 SUPERFAMILY SSF53686 5 387 2.49E-141 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme M892_17070 0fa8aabe8a95eeb5b219fa9d49d6c259 396 Gene3D G3DSA:3.40.50.1100 9 204 1.7E-183 T 12-10-2018 M892_17070 0fa8aabe8a95eeb5b219fa9d49d6c259 396 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 1 390 49.956 T 12-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 M892_04535 91e238347a438760064d6cab85de2e02 216 TIGRFAM TIGR01102 yscR: type III secretion apparatus protein, YscR/HrcR family 10 211 4.4E-92 T 12-10-2018 IPR005773 Yop virulence translocation protein R GO:0015031|GO:0016021 M892_04535 91e238347a438760064d6cab85de2e02 216 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 192 204 - T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 M892_04535 91e238347a438760064d6cab85de2e02 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 11 30 4.1E-71 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 M892_04535 91e238347a438760064d6cab85de2e02 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 165 186 4.1E-71 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 M892_04535 91e238347a438760064d6cab85de2e02 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 189 214 4.1E-71 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 M892_04535 91e238347a438760064d6cab85de2e02 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 50 69 4.1E-71 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 M892_04535 91e238347a438760064d6cab85de2e02 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 30 50 4.1E-71 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 M892_04535 91e238347a438760064d6cab85de2e02 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 144 164 4.1E-71 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 M892_04535 91e238347a438760064d6cab85de2e02 216 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 144 159 - T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 M892_04535 91e238347a438760064d6cab85de2e02 216 Pfam PF00813 FliP family 14 211 2.2E-68 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 M892_21455 803e33b1cdb6932240ad6830d8cf7e5b 410 Gene3D G3DSA:1.20.1250.20 3 401 1.4E-56 T 12-10-2018 M892_21455 803e33b1cdb6932240ad6830d8cf7e5b 410 SUPERFAMILY SSF103473 9 402 4.19E-56 T 12-10-2018 IPR036259 MFS transporter superfamily M892_21455 803e33b1cdb6932240ad6830d8cf7e5b 410 Pfam PF07690 Major Facilitator Superfamily 15 295 1.6E-29 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 M892_11515 8c1ba8b3c18658d94a334f71b82c4fab 233 Gene3D G3DSA:3.30.190.20 21 225 1.6E-80 T 12-10-2018 M892_11515 8c1ba8b3c18658d94a334f71b82c4fab 233 Gene3D G3DSA:3.40.50.790 68 159 1.6E-80 T 12-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich M892_11515 8c1ba8b3c18658d94a334f71b82c4fab 233 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 2.5E-106 T 12-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 M892_11515 8c1ba8b3c18658d94a334f71b82c4fab 233 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.048 T 12-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 M892_11515 8c1ba8b3c18658d94a334f71b82c4fab 233 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 12-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_11515 8c1ba8b3c18658d94a334f71b82c4fab 233 SUPERFAMILY SSF56808 6 225 2.49E-82 T 12-10-2018 IPR023674 Ribosomal protein L1-like M892_11515 8c1ba8b3c18658d94a334f71b82c4fab 233 PIRSF PIRSF002155 1 227 3.8E-79 T 12-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_11515 8c1ba8b3c18658d94a334f71b82c4fab 233 Pfam PF00687 Ribosomal protein L1p/L10e family 31 219 1.7E-52 T 12-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein M892_09540 1fb6179f98842d464b103e5519ec78e8 267 Pfam PF00535 Glycosyl transferase family 2 15 114 1.5E-14 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 M892_09540 1fb6179f98842d464b103e5519ec78e8 267 Gene3D G3DSA:3.90.550.10 3 242 5.7E-20 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M892_09540 1fb6179f98842d464b103e5519ec78e8 267 SUPERFAMILY SSF53448 9 156 3.3E-22 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M892_09025 3ac6fad5128c9eb4b931bc1b354b5047 574 Pfam PF02080 TrkA-C domain 293 349 1.3E-11 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 M892_09025 3ac6fad5128c9eb4b931bc1b354b5047 574 Pfam PF02080 TrkA-C domain 209 276 7.8E-11 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 M892_09025 3ac6fad5128c9eb4b931bc1b354b5047 574 Gene3D G3DSA:3.30.70.1450 206 279 4.8E-13 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 M892_09025 3ac6fad5128c9eb4b931bc1b354b5047 574 Gene3D G3DSA:3.30.70.1450 289 360 8.8E-12 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 M892_09025 3ac6fad5128c9eb4b931bc1b354b5047 574 Pfam PF03600 Citrate transporter 30 518 6.5E-32 T 12-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 M892_09025 3ac6fad5128c9eb4b931bc1b354b5047 574 SUPERFAMILY SSF116726 290 349 1.96E-13 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 M892_09025 3ac6fad5128c9eb4b931bc1b354b5047 574 SUPERFAMILY SSF116726 206 282 4.58E-16 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 M892_10660 5e689bd260051bb09b895c0adc9acd08 401 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 4 368 4.0E-82 T 12-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 M892_10660 5e689bd260051bb09b895c0adc9acd08 401 Pfam PF07690 Major Facilitator Superfamily 13 349 3.1E-35 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 M892_10660 5e689bd260051bb09b895c0adc9acd08 401 SUPERFAMILY SSF103473 5 378 1.83E-51 T 12-10-2018 IPR036259 MFS transporter superfamily M892_10660 5e689bd260051bb09b895c0adc9acd08 401 Gene3D G3DSA:1.20.1720.10 8 377 1.2E-73 T 12-10-2018 M892_17250 6dfe7ca0e595ce73ff664a8a74aff3f8 165 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 67 78 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M892_17250 6dfe7ca0e595ce73ff664a8a74aff3f8 165 Gene3D G3DSA:3.30.70.20 3 165 4.4E-57 T 12-10-2018 M892_17250 6dfe7ca0e595ce73ff664a8a74aff3f8 165 SUPERFAMILY SSF54862 2 160 2.93E-54 T 12-10-2018 M892_17250 6dfe7ca0e595ce73ff664a8a74aff3f8 165 Pfam PF13247 4Fe-4S dicluster domain 25 123 1.3E-26 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M892_25565 ac49237d1ba2771b9fe8b56214e70e78 287 Gene3D G3DSA:1.10.3720.10 61 285 1.5E-35 T 12-10-2018 IPR035906 MetI-like superfamily M892_25565 ac49237d1ba2771b9fe8b56214e70e78 287 SUPERFAMILY SSF161098 22 274 1.87E-42 T 12-10-2018 IPR035906 MetI-like superfamily M892_25565 ac49237d1ba2771b9fe8b56214e70e78 287 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 283 7.5E-27 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M892_25565 ac49237d1ba2771b9fe8b56214e70e78 287 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 14 283 1.3E-99 T 12-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 M892_11150 77b53fa82559f83bfd3c3d1ef52f114d 243 Pfam PF04340 Protein of unknown function, DUF484 15 225 9.2E-70 T 12-10-2018 IPR007435 Protein of unknown function DUF484 M892_11150 77b53fa82559f83bfd3c3d1ef52f114d 243 Gene3D G3DSA:3.30.450.40 52 228 1.0E-35 T 12-10-2018 IPR029016 GAF-like domain superfamily M892_00555 43fb7f16aed8cf28849dd30faa85d0dd 992 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 69 138 1.0E-7 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M892_00555 43fb7f16aed8cf28849dd30faa85d0dd 992 Pfam PF00384 Molybdopterin oxidoreductase 234 654 3.0E-7 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M892_00555 43fb7f16aed8cf28849dd30faa85d0dd 992 Gene3D G3DSA:2.20.25.90 63 143 1.2E-10 T 12-10-2018 M892_00555 43fb7f16aed8cf28849dd30faa85d0dd 992 Gene3D G3DSA:2.40.40.20 832 992 1.7E-17 T 12-10-2018 M892_00555 43fb7f16aed8cf28849dd30faa85d0dd 992 Pfam PF01568 Molydopterin dinucleotide binding domain 853 961 1.7E-10 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 M892_00555 43fb7f16aed8cf28849dd30faa85d0dd 992 SUPERFAMILY SSF53706 68 740 4.71E-85 T 12-10-2018 M892_00555 43fb7f16aed8cf28849dd30faa85d0dd 992 SUPERFAMILY SSF50692 841 992 2.71E-19 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily M892_00555 43fb7f16aed8cf28849dd30faa85d0dd 992 Gene3D G3DSA:3.40.50.740 144 202 1.1E-5 T 12-10-2018 M892_00555 43fb7f16aed8cf28849dd30faa85d0dd 992 SMART SM00926 66 139 5.9E-12 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M892_00555 43fb7f16aed8cf28849dd30faa85d0dd 992 Gene3D G3DSA:3.40.50.740 541 672 3.1E-7 T 12-10-2018 M892_00555 43fb7f16aed8cf28849dd30faa85d0dd 992 Gene3D G3DSA:3.40.228.10 248 539 4.1E-37 T 12-10-2018 M892_06620 b715f0ff3ea1e8c2b2dc2fddee697180 143 Pfam PF02169 LPP20 lipoprotein 20 118 5.4E-8 T 12-10-2018 IPR024952 Lipoprotein LPP20-like M892_06620 b715f0ff3ea1e8c2b2dc2fddee697180 143 PIRSF PIRSF028687 1 143 3.1E-58 T 12-10-2018 IPR007293 Flagellar protein FlgP M892_26290 ad1e6c87ac6fd68d26335188ee58fff5 734 Pfam PF00563 EAL domain 479 714 6.2E-58 T 12-10-2018 IPR001633 EAL domain M892_26290 ad1e6c87ac6fd68d26335188ee58fff5 734 SUPERFAMILY SSF141868 478 727 4.97E-66 T 12-10-2018 IPR035919 EAL domain superfamily M892_26290 ad1e6c87ac6fd68d26335188ee58fff5 734 Gene3D G3DSA:3.20.20.450 465 722 3.5E-73 T 12-10-2018 IPR035919 EAL domain superfamily M892_26290 ad1e6c87ac6fd68d26335188ee58fff5 734 SMART SM00052 472 720 1.7E-59 T 12-10-2018 IPR001633 EAL domain M892_23010 ae9da865116ceb17d69649fa915f0188 368 Pfam PF03459 TOBE domain 292 358 3.4E-15 T 12-10-2018 IPR005116 Transport-associated OB, type 1 M892_23010 ae9da865116ceb17d69649fa915f0188 368 SMART SM00382 24 206 1.5E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_23010 ae9da865116ceb17d69649fa915f0188 368 Gene3D G3DSA:3.40.50.300 5 232 2.0E-54 T 12-10-2018 M892_23010 ae9da865116ceb17d69649fa915f0188 368 Pfam PF00005 ABC transporter 17 157 4.1E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_23010 ae9da865116ceb17d69649fa915f0188 368 SUPERFAMILY SSF50331 235 358 7.02E-18 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal M892_23010 ae9da865116ceb17d69649fa915f0188 368 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 3 358 6.7E-138 T 12-10-2018 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 M892_23010 ae9da865116ceb17d69649fa915f0188 368 SUPERFAMILY SSF52540 12 236 3.52E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_23010 ae9da865116ceb17d69649fa915f0188 368 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_23010 ae9da865116ceb17d69649fa915f0188 368 Gene3D G3DSA:2.40.50.100 290 359 9.2E-16 T 12-10-2018 M892_26675 283572ea3e0c0e9739c0fa29534f46e2 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 63 1.8E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_26675 283572ea3e0c0e9739c0fa29534f46e2 296 Gene3D G3DSA:3.40.190.10 168 259 1.4E-13 T 12-10-2018 M892_26675 283572ea3e0c0e9739c0fa29534f46e2 296 SUPERFAMILY SSF46785 3 82 1.18E-9 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_26675 283572ea3e0c0e9739c0fa29534f46e2 296 Gene3D G3DSA:3.40.190.10 87 284 1.4E-13 T 12-10-2018 M892_26675 283572ea3e0c0e9739c0fa29534f46e2 296 Gene3D G3DSA:1.10.10.10 1 85 7.5E-13 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_26675 283572ea3e0c0e9739c0fa29534f46e2 296 SUPERFAMILY SSF53850 87 287 4.71E-15 T 12-10-2018 M892_22405 718a307333f58f01a4a45c8b51a4b13d 168 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 4 157 3.1E-56 T 12-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 M892_22405 718a307333f58f01a4a45c8b51a4b13d 168 PIRSF PIRSF028301 1 168 8.1E-63 T 12-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 M892_22405 718a307333f58f01a4a45c8b51a4b13d 168 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 6 157 2.3E-58 T 12-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 M892_16925 9695db5fe8521958e47b8ad04148c8c0 426 SMART SM00387 336 426 2.0E-9 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_16925 9695db5fe8521958e47b8ad04148c8c0 426 SUPERFAMILY SSF47384 210 292 1.0E-15 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M892_16925 9695db5fe8521958e47b8ad04148c8c0 426 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 344 422 2.5E-7 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_16925 9695db5fe8521958e47b8ad04148c8c0 426 SMART SM00388 227 292 3.4E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M892_16925 9695db5fe8521958e47b8ad04148c8c0 426 Pfam PF00512 His Kinase A (phospho-acceptor) domain 229 290 1.1E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M892_16925 9695db5fe8521958e47b8ad04148c8c0 426 Gene3D G3DSA:3.30.565.10 302 426 6.0E-13 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_16925 9695db5fe8521958e47b8ad04148c8c0 426 Gene3D G3DSA:1.10.287.130 178 293 1.4E-19 T 12-10-2018 M892_16925 9695db5fe8521958e47b8ad04148c8c0 426 SUPERFAMILY SSF55874 305 422 3.8E-16 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_23680 54a6117973c8d67864ab176adfaeff14 144 SUPERFAMILY SSF55729 1 140 3.04E-27 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_23680 54a6117973c8d67864ab176adfaeff14 144 Gene3D G3DSA:3.40.630.30 1 143 2.4E-31 T 12-10-2018 M892_23680 54a6117973c8d67864ab176adfaeff14 144 Pfam PF00583 Acetyltransferase (GNAT) family 26 121 4.6E-17 T 12-10-2018 IPR000182 GNAT domain M892_08745 114df897aeac27fbe8150347217baf93 626 SUPERFAMILY SSF103190 207 298 7.85E-24 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily M892_08745 114df897aeac27fbe8150347217baf93 626 Gene3D G3DSA:3.30.450.20 348 462 3.5E-19 T 12-10-2018 M892_08745 114df897aeac27fbe8150347217baf93 626 Gene3D G3DSA:3.30.70.270 463 623 9.7E-46 T 12-10-2018 M892_08745 114df897aeac27fbe8150347217baf93 626 SMART SM00086 412 454 0.0027 T 12-10-2018 IPR001610 PAC motif M892_08745 114df897aeac27fbe8150347217baf93 626 Pfam PF00990 Diguanylate cyclase, GGDEF domain 467 615 1.1E-35 T 12-10-2018 IPR000160 GGDEF domain M892_08745 114df897aeac27fbe8150347217baf93 626 Gene3D G3DSA:3.30.450.20 73 206 3.7E-42 T 12-10-2018 M892_08745 114df897aeac27fbe8150347217baf93 626 SMART SM00267 454 619 1.2E-48 T 12-10-2018 IPR000160 GGDEF domain M892_08745 114df897aeac27fbe8150347217baf93 626 SUPERFAMILY SSF55073 470 619 6.04E-39 T 12-10-2018 IPR029787 Nucleotide cyclase M892_08745 114df897aeac27fbe8150347217baf93 626 Gene3D G3DSA:3.30.450.20 207 302 3.3E-32 T 12-10-2018 M892_08745 114df897aeac27fbe8150347217baf93 626 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 344 461 2.9E-14 T 12-10-2018 IPR000014 PAS domain M892_08745 114df897aeac27fbe8150347217baf93 626 SUPERFAMILY SSF103190 36 206 4.39E-51 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily M892_08745 114df897aeac27fbe8150347217baf93 626 Gene3D G3DSA:1.20.5.170 26 72 1.1E-25 T 12-10-2018 M892_08745 114df897aeac27fbe8150347217baf93 626 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 462 618 1.3E-38 T 12-10-2018 IPR000160 GGDEF domain M892_08745 114df897aeac27fbe8150347217baf93 626 SUPERFAMILY SSF55785 352 462 1.21E-19 T 12-10-2018 IPR035965 PAS domain superfamily M892_08745 114df897aeac27fbe8150347217baf93 626 Pfam PF13426 PAS domain 352 453 1.6E-10 T 12-10-2018 IPR000014 PAS domain M892_05125 d06a5d5ae4ecc5730169371c99216f2d 223 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 20 222 1.1E-64 T 12-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 M892_05125 d06a5d5ae4ecc5730169371c99216f2d 223 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 20 223 31.595 T 12-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 M892_05125 d06a5d5ae4ecc5730169371c99216f2d 223 SUPERFAMILY SSF50249 21 82 4.8E-19 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M892_05125 d06a5d5ae4ecc5730169371c99216f2d 223 Gene3D G3DSA:1.10.8.10 176 223 1.0E-23 T 12-10-2018 M892_05125 d06a5d5ae4ecc5730169371c99216f2d 223 Pfam PF01330 RuvA N terminal domain 21 81 4.5E-21 T 12-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 M892_05125 d06a5d5ae4ecc5730169371c99216f2d 223 SUPERFAMILY SSF46929 177 222 1.1E-12 T 12-10-2018 IPR036267 RuvA, C-terminal domain superfamily M892_05125 d06a5d5ae4ecc5730169371c99216f2d 223 SUPERFAMILY SSF47781 85 155 2.06E-19 T 12-10-2018 IPR010994 RuvA domain 2-like M892_05125 d06a5d5ae4ecc5730169371c99216f2d 223 Gene3D G3DSA:2.40.50.140 20 84 6.5E-28 T 12-10-2018 M892_05125 d06a5d5ae4ecc5730169371c99216f2d 223 Pfam PF14520 Helix-hairpin-helix domain 91 149 8.9E-14 T 12-10-2018 M892_05125 d06a5d5ae4ecc5730169371c99216f2d 223 Pfam PF07499 RuvA, C-terminal domain 179 222 1.2E-16 T 12-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 M892_05125 d06a5d5ae4ecc5730169371c99216f2d 223 SMART SM00278 92 111 540.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 M892_05125 d06a5d5ae4ecc5730169371c99216f2d 223 SMART SM00278 127 146 0.071 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 M892_05125 d06a5d5ae4ecc5730169371c99216f2d 223 Gene3D G3DSA:1.10.150.20 86 162 1.3E-25 T 12-10-2018 M892_07740 ceb35b8ef6a18ec4d1c339dcd1f2cea9 272 Gene3D G3DSA:3.40.50.300 21 269 2.1E-65 T 12-10-2018 M892_07740 ceb35b8ef6a18ec4d1c339dcd1f2cea9 272 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 26 272 2.7E-123 T 12-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 M892_07740 ceb35b8ef6a18ec4d1c339dcd1f2cea9 272 Pfam PF00005 ABC transporter 41 197 5.2E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_07740 ceb35b8ef6a18ec4d1c339dcd1f2cea9 272 SMART SM00382 50 252 1.3E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_07740 ceb35b8ef6a18ec4d1c339dcd1f2cea9 272 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_07740 ceb35b8ef6a18ec4d1c339dcd1f2cea9 272 SUPERFAMILY SSF52540 22 258 7.45E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_04070 1d70615cbec93776ef618dc47a98c23d 181 SUPERFAMILY SSF54626 66 179 1.26E-5 T 12-10-2018 IPR036298 Chalcone isomerase superfamily GO:0016872 M892_04070 1d70615cbec93776ef618dc47a98c23d 181 Pfam PF16036 Chalcone isomerase-like 41 178 3.6E-8 T 12-10-2018 IPR016087 Chalcone isomerase GO:0016872 M892_24535 961fd1d10127e09697a68f5f4b3de9ca 403 SUPERFAMILY SSF53901 5 271 6.01E-85 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M892_24535 961fd1d10127e09697a68f5f4b3de9ca 403 Pfam PF02803 Thiolase, C-terminal domain 272 400 6.1E-45 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 M892_24535 961fd1d10127e09697a68f5f4b3de9ca 403 Gene3D G3DSA:3.40.47.10 127 399 1.6E-149 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M892_24535 961fd1d10127e09697a68f5f4b3de9ca 403 Pfam PF00108 Thiolase, N-terminal domain 5 264 1.2E-99 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 M892_24535 961fd1d10127e09697a68f5f4b3de9ca 403 ProSitePatterns PS00737 Thiolases signature 2. 348 364 - T 12-10-2018 IPR020613 Thiolase, conserved site GO:0016747 M892_24535 961fd1d10127e09697a68f5f4b3de9ca 403 ProSitePatterns PS00099 Thiolases active site. 383 396 - T 12-10-2018 IPR020610 Thiolase, active site GO:0016747 M892_24535 961fd1d10127e09697a68f5f4b3de9ca 403 SUPERFAMILY SSF53901 272 400 2.75E-38 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M892_24535 961fd1d10127e09697a68f5f4b3de9ca 403 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 85 103 - T 12-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 M892_24535 961fd1d10127e09697a68f5f4b3de9ca 403 Gene3D G3DSA:3.40.47.10 7 277 1.6E-149 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M892_24535 961fd1d10127e09697a68f5f4b3de9ca 403 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 400 4.8E-149 T 12-10-2018 IPR002155 Thiolase GO:0016747 M892_24535 961fd1d10127e09697a68f5f4b3de9ca 403 PIRSF PIRSF000429 1 403 9.5E-131 T 12-10-2018 IPR002155 Thiolase GO:0016747 M892_28640 22e14b70a1c2e1695b280e79c31dddaa 100 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 91 3.6E-14 T 12-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family M892_28640 22e14b70a1c2e1695b280e79c31dddaa 100 Gene3D G3DSA:3.30.2310.20 1 96 2.2E-21 T 12-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily M892_28640 22e14b70a1c2e1695b280e79c31dddaa 100 PIRSF PIRSF029218 1 98 1.0E-24 T 12-10-2018 IPR028344 Toxin-antitoxin system, toxin component ParE1/4 M892_11010 bcc6c24f2bcc99e674520e4a628f4b5d 224 Pfam PF02592 Putative vitamin uptake transporter 43 199 6.7E-38 T 12-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 M892_11010 bcc6c24f2bcc99e674520e4a628f4b5d 224 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 13 204 3.7E-62 T 12-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 M892_11010 bcc6c24f2bcc99e674520e4a628f4b5d 224 Hamap MF_02088 Probable queuosine precursor transporter. 7 214 15.539 T 12-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 M892_09265 992497969046d438982f61320a2c1b19 175 Hamap MF_00471 Regulator of ribonuclease activity A [rraA]. 1 161 47.821 T 12-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 M892_09265 992497969046d438982f61320a2c1b19 175 Gene3D G3DSA:3.50.30.40 1 161 9.0E-62 T 12-10-2018 M892_09265 992497969046d438982f61320a2c1b19 175 SUPERFAMILY SSF89562 2 158 1.31E-47 T 12-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily M892_09265 992497969046d438982f61320a2c1b19 175 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 6.2E-68 T 12-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 M892_09265 992497969046d438982f61320a2c1b19 175 Pfam PF03737 Aldolase/RraA 6 152 1.1E-39 T 12-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein M892_09265 992497969046d438982f61320a2c1b19 175 TIGRFAM TIGR02998 RraA_entero: regulator of ribonuclease activity A 1 160 3.8E-83 T 12-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 M892_27680 4715bd61a2157b3097937eb3ca0727f8 300 Pfam PF03466 LysR substrate binding domain 89 298 1.3E-34 T 12-10-2018 IPR005119 LysR, substrate-binding M892_27680 4715bd61a2157b3097937eb3ca0727f8 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 64 1.3E-13 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_27680 4715bd61a2157b3097937eb3ca0727f8 300 SUPERFAMILY SSF53850 91 298 1.03E-35 T 12-10-2018 M892_27680 4715bd61a2157b3097937eb3ca0727f8 300 SUPERFAMILY SSF46785 12 112 2.38E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_27680 4715bd61a2157b3097937eb3ca0727f8 300 Gene3D G3DSA:3.40.190.290 93 298 3.7E-45 T 12-10-2018 M892_27680 4715bd61a2157b3097937eb3ca0727f8 300 Gene3D G3DSA:1.10.10.10 6 92 5.0E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_09300 c3a7a49c649a76328e1727bd5f46d91d 115 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 2 91 3.6E-7 T 12-10-2018 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10 M892_09300 c3a7a49c649a76328e1727bd5f46d91d 115 Gene3D G3DSA:3.30.429.10 1 115 1.7E-31 T 12-10-2018 IPR014347 Tautomerase/MIF superfamily M892_09300 c3a7a49c649a76328e1727bd5f46d91d 115 SUPERFAMILY SSF55331 2 115 6.72E-33 T 12-10-2018 IPR014347 Tautomerase/MIF superfamily M892_08245 b47d1ec2162928e28b7486dcb560667a 786 SMART SM00091 155 221 2.6E-7 T 12-10-2018 IPR000014 PAS domain M892_08245 b47d1ec2162928e28b7486dcb560667a 786 SUPERFAMILY SSF55785 140 267 1.06E-25 T 12-10-2018 IPR035965 PAS domain superfamily M892_08245 b47d1ec2162928e28b7486dcb560667a 786 SUPERFAMILY SSF55874 336 506 1.96E-39 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_08245 b47d1ec2162928e28b7486dcb560667a 786 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 507 4.8E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_08245 b47d1ec2162928e28b7486dcb560667a 786 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 448 4.8E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_08245 b47d1ec2162928e28b7486dcb560667a 786 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 462 4.8E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_08245 b47d1ec2162928e28b7486dcb560667a 786 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 488 4.8E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_08245 b47d1ec2162928e28b7486dcb560667a 786 SUPERFAMILY SSF47384 270 347 2.94E-16 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M892_08245 b47d1ec2162928e28b7486dcb560667a 786 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 152 276 2.9E-18 T 12-10-2018 IPR000014 PAS domain M892_08245 b47d1ec2162928e28b7486dcb560667a 786 Gene3D G3DSA:1.10.287.130 268 345 1.1E-21 T 12-10-2018 M892_08245 b47d1ec2162928e28b7486dcb560667a 786 Pfam PF00512 His Kinase A (phospho-acceptor) domain 283 345 2.0E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M892_08245 b47d1ec2162928e28b7486dcb560667a 786 SMART SM00448 527 638 3.0E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_08245 b47d1ec2162928e28b7486dcb560667a 786 SUPERFAMILY SSF52172 527 649 1.99E-25 T 12-10-2018 IPR011006 CheY-like superfamily M892_08245 b47d1ec2162928e28b7486dcb560667a 786 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 507 6.2E-27 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_08245 b47d1ec2162928e28b7486dcb560667a 786 SMART SM00073 676 782 6.4E-10 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 M892_08245 b47d1ec2162928e28b7486dcb560667a 786 Gene3D G3DSA:1.10.287.970 1 89 2.1E-38 T 12-10-2018 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily M892_08245 b47d1ec2162928e28b7486dcb560667a 786 Gene3D G3DSA:3.30.450.20 150 267 7.8E-23 T 12-10-2018 M892_08245 b47d1ec2162928e28b7486dcb560667a 786 SMART SM00388 282 347 2.7E-16 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M892_08245 b47d1ec2162928e28b7486dcb560667a 786 SMART SM00387 394 510 4.6E-33 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_08245 b47d1ec2162928e28b7486dcb560667a 786 Gene3D G3DSA:1.20.120.160 670 786 1.2E-27 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 M892_08245 b47d1ec2162928e28b7486dcb560667a 786 PIRSF PIRSF003182 1 786 0.0 T 12-10-2018 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 M892_08245 b47d1ec2162928e28b7486dcb560667a 786 Gene3D G3DSA:3.40.50.2300 523 647 3.9E-27 T 12-10-2018 M892_08245 b47d1ec2162928e28b7486dcb560667a 786 Gene3D G3DSA:3.30.565.10 348 512 2.8E-43 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_08245 b47d1ec2162928e28b7486dcb560667a 786 SUPERFAMILY SSF47226 670 784 4.19E-29 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 M892_08245 b47d1ec2162928e28b7486dcb560667a 786 Pfam PF00072 Response regulator receiver domain 529 638 3.8E-18 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_08245 b47d1ec2162928e28b7486dcb560667a 786 Pfam PF01627 Hpt domain 697 768 1.1E-11 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 M892_08245 b47d1ec2162928e28b7486dcb560667a 786 Pfam PF08448 PAS fold 162 271 1.6E-18 T 12-10-2018 IPR013656 PAS fold-4 M892_11465 ca7dc75d0af841aac34c2d756530f80c 321 SUPERFAMILY SSF50037 272 318 1.37E-10 T 12-10-2018 IPR008988 Transcriptional repressor, C-terminal M892_11465 ca7dc75d0af841aac34c2d756530f80c 321 Pfam PF02237 Biotin protein ligase C terminal domain 272 318 7.2E-11 T 12-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 M892_11465 ca7dc75d0af841aac34c2d756530f80c 321 Gene3D G3DSA:3.30.930.10 67 271 7.9E-65 T 12-10-2018 M892_11465 ca7dc75d0af841aac34c2d756530f80c 321 Gene3D G3DSA:1.10.10.10 2 65 9.1E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_11465 ca7dc75d0af841aac34c2d756530f80c 321 Pfam PF08279 HTH domain 9 60 1.7E-12 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 M892_11465 ca7dc75d0af841aac34c2d756530f80c 321 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 83 318 5.9E-67 T 12-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 M892_11465 ca7dc75d0af841aac34c2d756530f80c 321 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 8 318 32.874 T 12-10-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 M892_11465 ca7dc75d0af841aac34c2d756530f80c 321 SUPERFAMILY SSF55681 71 269 1.57E-60 T 12-10-2018 M892_11465 ca7dc75d0af841aac34c2d756530f80c 321 SUPERFAMILY SSF46785 7 61 2.28E-12 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_11465 ca7dc75d0af841aac34c2d756530f80c 321 Pfam PF03099 Biotin/lipoate A/B protein ligase family 85 208 2.4E-19 T 12-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 M892_11465 ca7dc75d0af841aac34c2d756530f80c 321 Gene3D G3DSA:2.30.30.100 272 314 9.0E-21 T 12-10-2018 M892_16185 4c932d3fd2b178088983662cabead5d7 114 Pfam PF01627 Hpt domain 26 102 1.0E-10 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 M892_16185 4c932d3fd2b178088983662cabead5d7 114 SUPERFAMILY SSF47226 2 112 5.36E-25 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 M892_16185 4c932d3fd2b178088983662cabead5d7 114 Gene3D G3DSA:1.20.120.160 1 114 1.2E-29 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 M892_21975 6e287c9f22eff95d123e351e5eed4748 376 SUPERFAMILY SSF103025 8 285 2.98E-89 T 12-10-2018 M892_21975 6e287c9f22eff95d123e351e5eed4748 376 Gene3D G3DSA:2.40.30.110 288 365 3.2E-28 T 12-10-2018 M892_21975 6e287c9f22eff95d123e351e5eed4748 376 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 10 370 1.4E-105 T 12-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 M892_21975 6e287c9f22eff95d123e351e5eed4748 376 SUPERFAMILY SSF101790 283 375 3.6E-25 T 12-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal M892_21975 6e287c9f22eff95d123e351e5eed4748 376 Gene3D G3DSA:3.30.70.1400 60 143 5.3E-84 T 12-10-2018 M892_21975 6e287c9f22eff95d123e351e5eed4748 376 Gene3D G3DSA:3.30.1360.120 11 235 5.3E-84 T 12-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 M892_21975 6e287c9f22eff95d123e351e5eed4748 376 Gene3D G3DSA:4.10.1250.10 237 285 1.8E-20 T 12-10-2018 M892_21975 6e287c9f22eff95d123e351e5eed4748 376 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 272 366 2.4E-21 T 12-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 M892_21975 6e287c9f22eff95d123e351e5eed4748 376 Pfam PF01571 Aminomethyltransferase folate-binding domain 14 258 3.9E-88 T 12-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain M892_21975 6e287c9f22eff95d123e351e5eed4748 376 PIRSF PIRSF006487 1 376 7.8E-80 T 12-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 M892_20795 8fb249d1d4ac6b25f0576e0478fcd262 763 Gene3D G3DSA:3.30.450.20 27 181 4.4E-8 T 12-10-2018 M892_20795 8fb249d1d4ac6b25f0576e0478fcd262 763 SMART SM00267 325 492 7.2E-52 T 12-10-2018 IPR000160 GGDEF domain M892_20795 8fb249d1d4ac6b25f0576e0478fcd262 763 Pfam PF00563 EAL domain 508 742 2.8E-71 T 12-10-2018 IPR001633 EAL domain M892_20795 8fb249d1d4ac6b25f0576e0478fcd262 763 Gene3D G3DSA:3.30.70.270 330 504 8.3E-51 T 12-10-2018 M892_20795 8fb249d1d4ac6b25f0576e0478fcd262 763 SUPERFAMILY SSF55073 341 493 7.77E-41 T 12-10-2018 IPR029787 Nucleotide cyclase M892_20795 8fb249d1d4ac6b25f0576e0478fcd262 763 SUPERFAMILY SSF141868 507 754 9.15E-87 T 12-10-2018 IPR035919 EAL domain superfamily M892_20795 8fb249d1d4ac6b25f0576e0478fcd262 763 Pfam PF00990 Diguanylate cyclase, GGDEF domain 336 486 1.2E-39 T 12-10-2018 IPR000160 GGDEF domain M892_20795 8fb249d1d4ac6b25f0576e0478fcd262 763 Gene3D G3DSA:3.20.20.450 505 760 4.5E-93 T 12-10-2018 IPR035919 EAL domain superfamily M892_20795 8fb249d1d4ac6b25f0576e0478fcd262 763 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 335 487 4.9E-34 T 12-10-2018 IPR000160 GGDEF domain M892_20795 8fb249d1d4ac6b25f0576e0478fcd262 763 SMART SM00052 502 747 1.4E-109 T 12-10-2018 IPR001633 EAL domain M892_24815 d1861c8299035ecfda8a6e67af468333 199 PIRSF PIRSF001488 1 199 6.1E-61 T 12-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL M892_24815 d1861c8299035ecfda8a6e67af468333 199 SUPERFAMILY SSF52833 20 197 1.84E-43 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M892_24815 d1861c8299035ecfda8a6e67af468333 199 Pfam PF01323 DSBA-like thioredoxin domain 40 179 5.2E-19 T 12-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 M892_24815 d1861c8299035ecfda8a6e67af468333 199 Gene3D G3DSA:3.40.30.10 17 199 2.1E-49 T 12-10-2018 M892_24815 d1861c8299035ecfda8a6e67af468333 199 ProSitePatterns PS00194 Thioredoxin family active site. 41 59 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 M892_23395 e382fde19b1af183a970d5a5db627ec4 111 Gene3D G3DSA:1.20.120.160 1 110 5.9E-10 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 M892_23395 e382fde19b1af183a970d5a5db627ec4 111 SUPERFAMILY SSF47226 1 104 1.96E-14 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 M892_26990 834af2d3fce5ccfd0633dd777a917e0c 456 SUPERFAMILY SSF143548 16 155 1.78E-43 T 12-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 M892_26990 834af2d3fce5ccfd0633dd777a917e0c 456 Pfam PF03315 Serine dehydratase beta chain 3 153 2.5E-51 T 12-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 M892_26990 834af2d3fce5ccfd0633dd777a917e0c 456 Gene3D G3DSA:3.30.1330.90 10 157 4.7E-49 T 12-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 M892_26990 834af2d3fce5ccfd0633dd777a917e0c 456 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 3 448 6.9E-195 T 12-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 M892_26990 834af2d3fce5ccfd0633dd777a917e0c 456 Pfam PF03313 Serine dehydratase alpha chain 184 447 1.5E-94 T 12-10-2018 IPR005130 Serine dehydratase-like, alpha subunit M892_12875 e0fc5c2d790309e7775d67f0320b698b 95 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 1.2E-33 T 12-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 M892_12875 e0fc5c2d790309e7775d67f0320b698b 95 Gene3D G3DSA:3.30.160.100 1 95 1.9E-38 T 12-10-2018 IPR036567 Ribosome hibernation promotion factor-like M892_12875 e0fc5c2d790309e7775d67f0320b698b 95 SUPERFAMILY SSF69754 1 95 1.18E-34 T 12-10-2018 IPR036567 Ribosome hibernation promotion factor-like M892_12875 e0fc5c2d790309e7775d67f0320b698b 95 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 93 4.0E-28 T 12-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 M892_08050 b18f1cb4eb117a2e3a79040f358c6c68 283 ProSitePatterns PS00091 Thymidylate synthase active site. 140 168 - T 12-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 M892_08050 b18f1cb4eb117a2e3a79040f358c6c68 283 Pfam PF00303 Thymidylate synthase 2 283 3.5E-74 T 12-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 M892_08050 b18f1cb4eb117a2e3a79040f358c6c68 283 Gene3D G3DSA:3.30.572.10 1 283 1.8E-80 T 12-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 M892_08050 b18f1cb4eb117a2e3a79040f358c6c68 283 SUPERFAMILY SSF55831 2 283 5.89E-91 T 12-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 M892_08050 b18f1cb4eb117a2e3a79040f358c6c68 283 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 283 6.1E-42 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 M892_08050 b18f1cb4eb117a2e3a79040f358c6c68 283 Hamap MF_00008 Thymidylate synthase [thyA]. 1 283 33.262 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 M892_08050 b18f1cb4eb117a2e3a79040f358c6c68 283 PRINTS PR00108 Thymidylate synthase family signature 44 65 5.0E-14 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 M892_08050 b18f1cb4eb117a2e3a79040f358c6c68 283 PRINTS PR00108 Thymidylate synthase family signature 173 199 5.0E-14 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 M892_08050 b18f1cb4eb117a2e3a79040f358c6c68 283 PRINTS PR00108 Thymidylate synthase family signature 129 148 5.0E-14 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 M892_08050 b18f1cb4eb117a2e3a79040f358c6c68 283 PRINTS PR00108 Thymidylate synthase family signature 211 228 5.0E-14 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 M892_15485 a4222fc4369c7c53b87fc79fefdfd35c 384 Gene3D G3DSA:3.60.150.10 24 384 1.9E-160 T 12-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 M892_15485 a4222fc4369c7c53b87fc79fefdfd35c 384 SUPERFAMILY SSF103263 27 379 1.06E-149 T 12-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 M892_15485 a4222fc4369c7c53b87fc79fefdfd35c 384 Hamap MF_00300 Chorismate synthase [aroC]. 33 375 37.637 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 M892_15485 a4222fc4369c7c53b87fc79fefdfd35c 384 ProSitePatterns PS00788 Chorismate synthase signature 2. 147 163 - T 12-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 M892_15485 a4222fc4369c7c53b87fc79fefdfd35c 384 ProSitePatterns PS00789 Chorismate synthase signature 3. 342 358 - T 12-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 M892_15485 a4222fc4369c7c53b87fc79fefdfd35c 384 TIGRFAM TIGR00033 aroC: chorismate synthase 33 373 1.6E-143 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 M892_15485 a4222fc4369c7c53b87fc79fefdfd35c 384 ProSitePatterns PS00787 Chorismate synthase signature 1. 39 54 - T 12-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 M892_15485 a4222fc4369c7c53b87fc79fefdfd35c 384 Pfam PF01264 Chorismate synthase 33 368 8.9E-144 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 M892_15485 a4222fc4369c7c53b87fc79fefdfd35c 384 PIRSF PIRSF001456 26 383 1.1E-143 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 M892_07380 7034abcc3b4e45cc841205f5b391306c 315 Pfam PF06054 Competence protein CoiA-like family 30 58 2.7E-6 T 12-10-2018 IPR010330 Competence-induced protein CoiA-like M892_06345 71b2f2e73a38b7ea94cb048f73e11b83 378 Gene3D G3DSA:2.30.40.10 6 373 5.8E-143 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 M892_06345 71b2f2e73a38b7ea94cb048f73e11b83 378 Gene3D G3DSA:3.20.20.140 55 341 5.8E-143 T 12-10-2018 M892_06345 71b2f2e73a38b7ea94cb048f73e11b83 378 SUPERFAMILY SSF51556 54 347 3.03E-101 T 12-10-2018 IPR032466 Metal-dependent hydrolase M892_06345 71b2f2e73a38b7ea94cb048f73e11b83 378 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 1 374 8.0E-156 T 12-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 M892_06345 71b2f2e73a38b7ea94cb048f73e11b83 378 Pfam PF01979 Amidohydrolase family 51 374 4.4E-37 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 M892_06345 71b2f2e73a38b7ea94cb048f73e11b83 378 SUPERFAMILY SSF51338 1 53 7.71E-19 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 M892_06345 71b2f2e73a38b7ea94cb048f73e11b83 378 PIRSF PIRSF038994 1 378 8.3E-122 T 12-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 M892_02195 e896b9c4186aa4f4c7643cfa86a1f117 700 Pfam PF10531 SLBB domain 396 446 2.0E-7 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M892_02195 e896b9c4186aa4f4c7643cfa86a1f117 700 Pfam PF10531 SLBB domain 212 253 2.0E-8 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M892_02195 e896b9c4186aa4f4c7643cfa86a1f117 700 Pfam PF10531 SLBB domain 105 151 1.3E-4 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M892_02195 e896b9c4186aa4f4c7643cfa86a1f117 700 Pfam PF10531 SLBB domain 495 538 7.6E-5 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M892_02195 e896b9c4186aa4f4c7643cfa86a1f117 700 Pfam PF10531 SLBB domain 590 633 5.5E-8 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M892_02195 e896b9c4186aa4f4c7643cfa86a1f117 700 Pfam PF10531 SLBB domain 299 351 1.2E-12 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M892_02195 e896b9c4186aa4f4c7643cfa86a1f117 700 Gene3D G3DSA:3.30.1950.10 27 96 3.9E-6 T 12-10-2018 M892_02195 e896b9c4186aa4f4c7643cfa86a1f117 700 Pfam PF02563 Polysaccharide biosynthesis/export protein 29 97 2.3E-10 T 12-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 M892_02195 e896b9c4186aa4f4c7643cfa86a1f117 700 Gene3D G3DSA:3.10.560.10 482 576 1.1E-16 T 12-10-2018 M892_02195 e896b9c4186aa4f4c7643cfa86a1f117 700 Gene3D G3DSA:3.10.560.10 386 473 9.9E-15 T 12-10-2018 M892_02195 e896b9c4186aa4f4c7643cfa86a1f117 700 Gene3D G3DSA:3.10.560.10 580 671 1.4E-17 T 12-10-2018 M892_02195 e896b9c4186aa4f4c7643cfa86a1f117 700 Gene3D G3DSA:3.10.560.10 97 182 8.9E-14 T 12-10-2018 M892_02195 e896b9c4186aa4f4c7643cfa86a1f117 700 Gene3D G3DSA:3.10.560.10 289 378 2.1E-14 T 12-10-2018 M892_02195 e896b9c4186aa4f4c7643cfa86a1f117 700 Gene3D G3DSA:3.10.560.10 200 288 7.4E-18 T 12-10-2018 M892_20775 59e92a013282bdefe59941ffa2f44ace 668 Pfam PF02780 Transketolase, C-terminal domain 545 659 8.2E-21 T 12-10-2018 IPR033248 Transketolase, C-terminal domain M892_20775 59e92a013282bdefe59941ffa2f44ace 668 Gene3D G3DSA:3.40.50.970 7 329 3.6E-132 T 12-10-2018 M892_20775 59e92a013282bdefe59941ffa2f44ace 668 SUPERFAMILY SSF52518 4 333 1.23E-121 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold M892_20775 59e92a013282bdefe59941ffa2f44ace 668 ProSitePatterns PS00802 Transketolase signature 2. 471 487 - T 12-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 M892_20775 59e92a013282bdefe59941ffa2f44ace 668 Gene3D G3DSA:3.40.50.970 330 541 6.1E-85 T 12-10-2018 M892_20775 59e92a013282bdefe59941ffa2f44ace 668 SUPERFAMILY SSF52518 337 530 7.36E-68 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold M892_20775 59e92a013282bdefe59941ffa2f44ace 668 Pfam PF02779 Transketolase, pyrimidine binding domain 358 528 8.7E-48 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain M892_20775 59e92a013282bdefe59941ffa2f44ace 668 ProSitePatterns PS00801 Transketolase signature 1. 16 36 - T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 M892_20775 59e92a013282bdefe59941ffa2f44ace 668 SUPERFAMILY SSF52922 537 668 5.5E-45 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 M892_20775 59e92a013282bdefe59941ffa2f44ace 668 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 9 337 9.5E-167 T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 M892_20775 59e92a013282bdefe59941ffa2f44ace 668 TIGRFAM TIGR00232 tktlase_bact: transketolase 11 667 0.0 T 12-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 M892_20775 59e92a013282bdefe59941ffa2f44ace 668 SMART SM00861 358 529 1.2E-66 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain M892_20775 59e92a013282bdefe59941ffa2f44ace 668 Gene3D G3DSA:3.40.50.920 542 668 3.6E-46 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 M892_28630 8888eb300076bd07719ec3170a1e5608 179 Gene3D G3DSA:1.10.10.60 142 179 5.8E-9 T 12-10-2018 M892_28630 8888eb300076bd07719ec3170a1e5608 179 SMART SM00857 2 137 7.7E-48 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 M892_28630 8888eb300076bd07719ec3170a1e5608 179 Pfam PF00239 Resolvase, N terminal domain 3 137 8.5E-39 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 M892_28630 8888eb300076bd07719ec3170a1e5608 179 ProSitePatterns PS00397 Site-specific recombinases active site. 5 13 - T 12-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 M892_28630 8888eb300076bd07719ec3170a1e5608 179 SUPERFAMILY SSF46689 147 179 4.3E-6 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_28630 8888eb300076bd07719ec3170a1e5608 179 Gene3D G3DSA:3.40.50.1390 1 125 6.1E-40 T 12-10-2018 M892_28630 8888eb300076bd07719ec3170a1e5608 179 SUPERFAMILY SSF53041 3 137 2.49E-39 T 12-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 M892_28630 8888eb300076bd07719ec3170a1e5608 179 Pfam PF02796 Helix-turn-helix domain of resolvase 149 178 3.6E-7 T 12-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 M892_18180 74c68c719f9906ffb150fb34cb748244 153 Pfam PF03974 Ecotin 31 150 2.0E-38 T 12-10-2018 IPR005658 Proteinase inhibitor I11, ecotin M892_18180 74c68c719f9906ffb150fb34cb748244 153 PIRSF PIRSF006865 1 153 6.3E-45 T 12-10-2018 IPR005658 Proteinase inhibitor I11, ecotin M892_18180 74c68c719f9906ffb150fb34cb748244 153 Gene3D G3DSA:2.60.40.550 17 153 1.6E-44 T 12-10-2018 M892_18180 74c68c719f9906ffb150fb34cb748244 153 SUPERFAMILY SSF49772 30 153 5.89E-41 T 12-10-2018 IPR036198 Ecotin superfamily M892_25120 7d1a07dcf575f15f48bdb381fa826891 99 Gene3D G3DSA:3.30.70.860 2 99 4.0E-39 T 12-10-2018 IPR035571 UPF0234-like, C-terminal M892_25120 7d1a07dcf575f15f48bdb381fa826891 99 Pfam PF04175 Protein of unknown function (DUF406) 7 95 3.9E-28 T 12-10-2018 IPR005272 Conserved hypothetical protein CHP00743 M892_07200 ff91c25f2e5c575a9ba9a4456daa7587 534 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 284 5.3E-28 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M892_07200 ff91c25f2e5c575a9ba9a4456daa7587 534 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 8 485 48.74 T 12-10-2018 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 M892_07200 ff91c25f2e5c575a9ba9a4456daa7587 534 Gene3D G3DSA:3.40.190.10 128 241 1.7E-71 T 12-10-2018 M892_07200 ff91c25f2e5c575a9ba9a4456daa7587 534 SUPERFAMILY SSF53850 44 284 1.54E-31 T 12-10-2018 M892_07200 ff91c25f2e5c575a9ba9a4456daa7587 534 Gene3D G3DSA:1.10.530.10 306 467 2.5E-34 T 12-10-2018 M892_07200 ff91c25f2e5c575a9ba9a4456daa7587 534 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 326 354 - T 12-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 M892_07200 ff91c25f2e5c575a9ba9a4456daa7587 534 Pfam PF01464 Transglycosylase SLT domain 315 418 1.1E-20 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 M892_07200 ff91c25f2e5c575a9ba9a4456daa7587 534 Gene3D G3DSA:3.40.190.10 37 280 1.7E-71 T 12-10-2018 M892_07200 ff91c25f2e5c575a9ba9a4456daa7587 534 SUPERFAMILY SSF53955 262 467 3.46E-36 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily M892_07200 ff91c25f2e5c575a9ba9a4456daa7587 534 SMART SM00062 43 285 1.3E-25 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M892_00960 908b524099d6faf1cb5378583ed01d2c 399 Pfam PF01609 Transposase DDE domain 92 327 6.8E-16 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_00960 908b524099d6faf1cb5378583ed01d2c 399 SUPERFAMILY SSF53098 1 382 1.21E-52 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_03205 908b524099d6faf1cb5378583ed01d2c 399 Pfam PF01609 Transposase DDE domain 92 327 6.8E-16 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_03205 908b524099d6faf1cb5378583ed01d2c 399 SUPERFAMILY SSF53098 1 382 1.21E-52 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_05700 908b524099d6faf1cb5378583ed01d2c 399 Pfam PF01609 Transposase DDE domain 92 327 6.8E-16 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_05700 908b524099d6faf1cb5378583ed01d2c 399 SUPERFAMILY SSF53098 1 382 1.21E-52 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_25935 908b524099d6faf1cb5378583ed01d2c 399 Pfam PF01609 Transposase DDE domain 92 327 6.8E-16 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_25935 908b524099d6faf1cb5378583ed01d2c 399 SUPERFAMILY SSF53098 1 382 1.21E-52 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_09640 5a853bc8a316c17f95155d92f8baa4d0 609 Gene3D G3DSA:3.10.105.10 322 540 1.2E-42 T 12-10-2018 M892_09640 5a853bc8a316c17f95155d92f8baa4d0 609 PIRSF PIRSF002741 1 564 1.1E-71 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 M892_09640 5a853bc8a316c17f95155d92f8baa4d0 609 SUPERFAMILY SSF53850 41 562 5.27E-96 T 12-10-2018 M892_09640 5a853bc8a316c17f95155d92f8baa4d0 609 Gene3D G3DSA:3.40.190.10 19 321 1.8E-45 T 12-10-2018 M892_09640 5a853bc8a316c17f95155d92f8baa4d0 609 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 90 472 5.5E-57 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain M892_23560 de698cfc3e01cebb9987150928f071c5 204 Gene3D G3DSA:3.40.50.880 2 204 1.4E-50 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M892_23560 de698cfc3e01cebb9987150928f071c5 204 SUPERFAMILY SSF52317 1 178 2.55E-31 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M892_23560 de698cfc3e01cebb9987150928f071c5 204 Pfam PF01965 DJ-1/PfpI family 4 157 7.7E-19 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 M892_21805 0be70469959708244d41cac47170b5ba 713 SUPERFAMILY SSF56935 26 713 2.75E-83 T 12-10-2018 M892_21805 0be70469959708244d41cac47170b5ba 713 Pfam PF07715 TonB-dependent Receptor Plug Domain 48 150 1.7E-16 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain M892_21805 0be70469959708244d41cac47170b5ba 713 Gene3D G3DSA:2.40.170.20 159 713 1.4E-57 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily M892_21805 0be70469959708244d41cac47170b5ba 713 Pfam PF00593 TonB dependent receptor 289 710 1.7E-24 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel M892_21805 0be70469959708244d41cac47170b5ba 713 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 40 - T 12-10-2018 IPR010916 TonB box, conserved site M892_21805 0be70469959708244d41cac47170b5ba 713 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 696 713 - T 12-10-2018 IPR010917 TonB-dependent receptor, conserved site M892_21805 0be70469959708244d41cac47170b5ba 713 Gene3D G3DSA:2.170.130.10 32 155 5.3E-23 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily M892_02075 b7398d711ee5cffe5393d3f787cb4029 302 Gene3D G3DSA:3.30.420.40 119 290 1.8E-99 T 12-10-2018 M892_02075 b7398d711ee5cffe5393d3f787cb4029 302 ProSitePatterns PS01125 ROK family signature. 130 157 - T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 M892_02075 b7398d711ee5cffe5393d3f787cb4029 302 Hamap MF_01271 N-acetyl-D-glucosamine kinase [nagK]. 1 302 63.731 T 12-10-2018 IPR023505 N-acetyl-D-glucosamine kinase GO:0045127 KEGG: 00520+2.7.1.59|MetaCyc: PWY-6517|MetaCyc: PWY-6906 M892_02075 b7398d711ee5cffe5393d3f787cb4029 302 Pfam PF00480 ROK family 2 300 6.2E-71 T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 M892_02075 b7398d711ee5cffe5393d3f787cb4029 302 SUPERFAMILY SSF53067 1 299 8.98E-56 T 12-10-2018 M892_02075 b7398d711ee5cffe5393d3f787cb4029 302 Gene3D G3DSA:3.30.420.40 4 297 1.8E-99 T 12-10-2018 M892_05300 afe3cffcef2bb8c45aa92edf49d80657 106 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 24 102 1.2E-33 T 12-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 M892_05300 afe3cffcef2bb8c45aa92edf49d80657 106 Gene3D G3DSA:3.30.1390.10 1 106 1.4E-45 T 12-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like M892_05300 afe3cffcef2bb8c45aa92edf49d80657 106 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 8 101 27.612 T 12-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS M892_05300 afe3cffcef2bb8c45aa92edf49d80657 106 SUPERFAMILY SSF54736 21 105 4.03E-32 T 12-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like M892_11880 ffcc7f38c24852d988f13efdba6faeaf 302 SUPERFAMILY SSF160240 210 287 1.1E-24 T 12-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 M892_11880 ffcc7f38c24852d988f13efdba6faeaf 302 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 11 286 7.3E-70 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 M892_11880 ffcc7f38c24852d988f13efdba6faeaf 302 Pfam PF01545 Cation efflux family 15 206 2.5E-43 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 M892_11880 ffcc7f38c24852d988f13efdba6faeaf 302 SUPERFAMILY SSF161111 8 207 1.09E-50 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily M892_11880 ffcc7f38c24852d988f13efdba6faeaf 302 Gene3D G3DSA:3.30.70.1350 207 290 6.0E-31 T 12-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 M892_11880 ffcc7f38c24852d988f13efdba6faeaf 302 Gene3D G3DSA:1.20.1510.10 8 206 1.7E-60 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily M892_11880 ffcc7f38c24852d988f13efdba6faeaf 302 Pfam PF16916 Dimerisation domain of Zinc Transporter 210 286 1.2E-25 T 12-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain M892_03710 82ff3065990337aa5436f7d8360847f7 472 Gene3D G3DSA:2.40.50.140 3 111 1.1E-19 T 12-10-2018 M892_03710 82ff3065990337aa5436f7d8360847f7 472 PRINTS PR01042 Aspartyl-tRNA synthetase signature 214 226 2.4E-14 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 M892_03710 82ff3065990337aa5436f7d8360847f7 472 PRINTS PR01042 Aspartyl-tRNA synthetase signature 387 403 2.4E-14 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 M892_03710 82ff3065990337aa5436f7d8360847f7 472 PRINTS PR01042 Aspartyl-tRNA synthetase signature 427 441 2.4E-14 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 M892_03710 82ff3065990337aa5436f7d8360847f7 472 PRINTS PR01042 Aspartyl-tRNA synthetase signature 230 243 2.4E-14 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 M892_03710 82ff3065990337aa5436f7d8360847f7 472 Pfam PF00152 tRNA synthetases class II (D, K and N) 125 466 6.1E-80 T 12-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 M892_03710 82ff3065990337aa5436f7d8360847f7 472 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 11 472 6.0E-204 T 12-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 M892_03710 82ff3065990337aa5436f7d8360847f7 472 SUPERFAMILY SSF55681 104 470 1.82E-93 T 12-10-2018 M892_03710 82ff3065990337aa5436f7d8360847f7 472 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 12 472 45.431 T 12-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 M892_03710 82ff3065990337aa5436f7d8360847f7 472 Gene3D G3DSA:3.30.930.10 115 471 4.3E-107 T 12-10-2018 M892_03710 82ff3065990337aa5436f7d8360847f7 472 SUPERFAMILY SSF50249 22 107 1.09E-16 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M892_03710 82ff3065990337aa5436f7d8360847f7 472 Pfam PF01336 OB-fold nucleic acid binding domain 26 105 5.3E-11 T 12-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 M892_14665 0cad9f8e3ded370696d417dbe82344ad 296 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 167 290 5.5E-36 T 12-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain M892_14665 0cad9f8e3ded370696d417dbe82344ad 296 Gene3D G3DSA:1.10.1040.10 167 291 2.1E-39 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 M892_14665 0cad9f8e3ded370696d417dbe82344ad 296 SUPERFAMILY SSF51735 2 165 6.95E-51 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_14665 0cad9f8e3ded370696d417dbe82344ad 296 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 141 1.8E-30 T 12-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain M892_14665 0cad9f8e3ded370696d417dbe82344ad 296 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 292 6.7E-79 T 12-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 M892_14665 0cad9f8e3ded370696d417dbe82344ad 296 Gene3D G3DSA:3.40.50.720 1 166 3.9E-49 T 12-10-2018 M892_14665 0cad9f8e3ded370696d417dbe82344ad 296 SUPERFAMILY SSF48179 167 290 6.46E-34 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 M892_08785 d229d0d4ac028aeb1ce2f6b0160be46c 515 Gene3D G3DSA:3.30.160.270 393 500 4.9E-7 T 12-10-2018 M892_08785 d229d0d4ac028aeb1ce2f6b0160be46c 515 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 12-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 M892_08785 d229d0d4ac028aeb1ce2f6b0160be46c 515 Gene3D G3DSA:1.10.238.260 280 392 4.8E-32 T 12-10-2018 M892_08785 d229d0d4ac028aeb1ce2f6b0160be46c 515 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 496 1.7E-236 T 12-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 M892_08785 d229d0d4ac028aeb1ce2f6b0160be46c 515 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 508 42.105 T 12-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 M892_08785 d229d0d4ac028aeb1ce2f6b0160be46c 515 SUPERFAMILY SSF110921 393 498 2.75E-21 T 12-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 M892_08785 d229d0d4ac028aeb1ce2f6b0160be46c 515 Gene3D G3DSA:3.20.20.70 1 277 8.7E-107 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M892_08785 d229d0d4ac028aeb1ce2f6b0160be46c 515 Pfam PF00682 HMGL-like 4 273 1.6E-100 T 12-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 M892_08785 d229d0d4ac028aeb1ce2f6b0160be46c 515 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 12-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 M892_08785 d229d0d4ac028aeb1ce2f6b0160be46c 515 SUPERFAMILY SSF51569 1 291 5.68E-101 T 12-10-2018 M892_08785 d229d0d4ac028aeb1ce2f6b0160be46c 515 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 498 2.3E-30 T 12-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 M892_08785 d229d0d4ac028aeb1ce2f6b0160be46c 515 SMART SM00917 369 499 1.0E-27 T 12-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 M892_06870 ff7274735ab6f2123659fbb369837359 105 Pfam PF02410 Ribosomal silencing factor during starvation 11 104 4.3E-28 T 12-10-2018 M892_06870 ff7274735ab6f2123659fbb369837359 105 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 2 105 25.542 T 12-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS M892_06870 ff7274735ab6f2123659fbb369837359 105 SUPERFAMILY SSF81301 5 105 1.8E-38 T 12-10-2018 M892_06870 ff7274735ab6f2123659fbb369837359 105 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 104 3.9E-39 T 12-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS M892_06870 ff7274735ab6f2123659fbb369837359 105 Gene3D G3DSA:3.30.460.10 2 105 1.1E-37 T 12-10-2018 M892_13765 828c727fb4104e9eef4eba86df6cbed4 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 1.8E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M892_13765 828c727fb4104e9eef4eba86df6cbed4 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 1.8E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M892_13765 828c727fb4104e9eef4eba86df6cbed4 255 SMART SM00895 99 227 9.1E-19 T 12-10-2018 IPR011711 GntR, C-terminal M892_13765 828c727fb4104e9eef4eba86df6cbed4 255 Gene3D G3DSA:1.20.120.530 97 236 2.5E-26 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal M892_13765 828c727fb4104e9eef4eba86df6cbed4 255 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 2.4E-25 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M892_13765 828c727fb4104e9eef4eba86df6cbed4 255 SUPERFAMILY SSF48008 98 235 6.28E-20 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal M892_13765 828c727fb4104e9eef4eba86df6cbed4 255 Pfam PF07729 FCD domain 99 226 9.5E-18 T 12-10-2018 IPR011711 GntR, C-terminal M892_13765 828c727fb4104e9eef4eba86df6cbed4 255 SUPERFAMILY SSF46785 5 76 2.06E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_13765 828c727fb4104e9eef4eba86df6cbed4 255 SMART SM00345 15 74 9.1E-28 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M892_13765 828c727fb4104e9eef4eba86df6cbed4 255 Gene3D G3DSA:1.10.10.10 1 74 1.4E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_13675 b42e973034ad51b8e09ffdce66cf9075 424 Gene3D G3DSA:3.30.465.10 339 418 1.3E-26 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 M892_13675 b42e973034ad51b8e09ffdce66cf9075 424 SUPERFAMILY SSF56176 339 419 1.36E-20 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 M892_13675 b42e973034ad51b8e09ffdce66cf9075 424 Pfam PF01595 Domain of unknown function DUF21 13 181 2.1E-49 T 12-10-2018 IPR002550 CNNM, transmembrane domain M892_13675 b42e973034ad51b8e09ffdce66cf9075 424 Gene3D G3DSA:3.10.580.10 201 330 3.5E-42 T 12-10-2018 M892_13675 b42e973034ad51b8e09ffdce66cf9075 424 SMART SM01091 342 420 3.5E-23 T 12-10-2018 IPR005170 Transporter-associated domain M892_13675 b42e973034ad51b8e09ffdce66cf9075 424 Pfam PF03471 Transporter associated domain 344 418 1.6E-16 T 12-10-2018 IPR005170 Transporter-associated domain M892_13675 b42e973034ad51b8e09ffdce66cf9075 424 Pfam PF00571 CBS domain 278 326 3.6E-4 T 12-10-2018 IPR000644 CBS domain M892_13675 b42e973034ad51b8e09ffdce66cf9075 424 SUPERFAMILY SSF54631 192 329 2.65E-24 T 12-10-2018 M892_26700 7c83ba34d70c307666a116a5368fe24c 466 TIGRFAM TIGR03329 Phn_aa_oxid: putative aminophosphonate oxidoreductase 5 464 2.7E-246 T 12-10-2018 IPR017715 Putative aminophosphonate oxidoreductase M892_26700 7c83ba34d70c307666a116a5368fe24c 466 SUPERFAMILY SSF51905 19 306 1.5E-36 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_26700 7c83ba34d70c307666a116a5368fe24c 466 Pfam PF01266 FAD dependent oxidoreductase 30 393 2.0E-49 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 M892_26700 7c83ba34d70c307666a116a5368fe24c 466 Gene3D G3DSA:3.50.50.60 30 395 6.6E-62 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_26700 7c83ba34d70c307666a116a5368fe24c 466 Gene3D G3DSA:3.30.9.10 124 354 6.6E-62 T 12-10-2018 M892_07430 dc091ac446b0ec27a4a7ec860abd9129 67 Gene3D G3DSA:3.40.1440.10 1 66 2.8E-11 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 M892_07430 dc091ac446b0ec27a4a7ec860abd9129 67 Pfam PF01541 GIY-YIG catalytic domain 5 61 3.8E-13 T 12-10-2018 IPR000305 GIY-YIG endonuclease M892_07430 dc091ac446b0ec27a4a7ec860abd9129 67 SUPERFAMILY SSF82771 3 62 1.83E-13 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 M892_09415 f8ef00a46081c2d1b9184eb5b61b3051 171 SUPERFAMILY SSF56925 23 171 6.28E-19 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel M892_09415 f8ef00a46081c2d1b9184eb5b61b3051 171 Pfam PF13505 Outer membrane protein beta-barrel domain 11 171 2.3E-16 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel M892_09415 f8ef00a46081c2d1b9184eb5b61b3051 171 Gene3D G3DSA:2.40.160.20 21 171 5.9E-16 T 12-10-2018 M892_03645 957b6b334d3f37e86bdcfabda25ac060 456 SUPERFAMILY SSF56322 9 455 1.44E-142 T 12-10-2018 IPR005801 ADC synthase GO:0009058 M892_03645 957b6b334d3f37e86bdcfabda25ac060 456 Pfam PF00425 chorismate binding enzyme 194 447 1.6E-97 T 12-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal M892_03645 957b6b334d3f37e86bdcfabda25ac060 456 Gene3D G3DSA:3.60.120.10 6 456 3.7E-169 T 12-10-2018 IPR005801 ADC synthase GO:0009058 M892_03645 957b6b334d3f37e86bdcfabda25ac060 456 PRINTS PR00095 Anthranilate synthase component I signature 389 403 9.6E-18 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 M892_03645 957b6b334d3f37e86bdcfabda25ac060 456 PRINTS PR00095 Anthranilate synthase component I signature 295 308 9.6E-18 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 M892_03645 957b6b334d3f37e86bdcfabda25ac060 456 PRINTS PR00095 Anthranilate synthase component I signature 309 322 9.6E-18 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 M892_03645 957b6b334d3f37e86bdcfabda25ac060 456 PRINTS PR00095 Anthranilate synthase component I signature 404 418 9.6E-18 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 M892_03645 957b6b334d3f37e86bdcfabda25ac060 456 Pfam PF04715 Anthranilate synthase component I, N terminal region 22 156 3.9E-28 T 12-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 M892_03645 957b6b334d3f37e86bdcfabda25ac060 456 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 112 448 4.2E-121 T 12-10-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 M892_25440 0c02191d7e60c99038c337616ee53c69 696 Pfam PF00563 EAL domain 440 670 8.0E-56 T 12-10-2018 IPR001633 EAL domain M892_25440 0c02191d7e60c99038c337616ee53c69 696 Gene3D G3DSA:3.20.20.450 432 678 7.9E-62 T 12-10-2018 IPR035919 EAL domain superfamily M892_25440 0c02191d7e60c99038c337616ee53c69 696 SMART SM00052 433 675 4.6E-51 T 12-10-2018 IPR001633 EAL domain M892_25440 0c02191d7e60c99038c337616ee53c69 696 Pfam PF02378 Phosphotransferase system, EIIC 38 330 8.3E-12 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 M892_25440 0c02191d7e60c99038c337616ee53c69 696 SUPERFAMILY SSF141868 439 680 1.57E-61 T 12-10-2018 IPR035919 EAL domain superfamily M892_26370 edd6bf456b034d918be0c3ef61d901b4 265 Gene3D G3DSA:3.20.20.450 26 261 2.1E-9 T 12-10-2018 IPR035919 EAL domain superfamily M892_26370 edd6bf456b034d918be0c3ef61d901b4 265 SUPERFAMILY SSF141868 30 257 1.31E-9 T 12-10-2018 IPR035919 EAL domain superfamily M892_26370 edd6bf456b034d918be0c3ef61d901b4 265 Pfam PF00563 EAL domain 31 250 4.2E-8 T 12-10-2018 IPR001633 EAL domain M892_23195 c361db310abb88bbbf8b65c5f199bb70 162 Pfam PF01936 NYN domain 8 156 1.1E-38 T 12-10-2018 IPR021139 NYN domain, limkain-b1-type M892_23195 c361db310abb88bbbf8b65c5f199bb70 162 Gene3D G3DSA:3.40.50.1010 1 162 5.0E-62 T 12-10-2018 M892_21850 e48924230130d7069be48e6cd65f339a 91 Pfam PF03811 InsA N-terminal domain 1 36 7.2E-8 T 12-10-2018 IPR003220 InsA N-terminal domain GO:0006313 M892_21850 e48924230130d7069be48e6cd65f339a 91 Pfam PF12759 InsA C-terminal domain 43 88 4.3E-20 T 12-10-2018 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain M892_21915 e48924230130d7069be48e6cd65f339a 91 Pfam PF03811 InsA N-terminal domain 1 36 7.2E-8 T 12-10-2018 IPR003220 InsA N-terminal domain GO:0006313 M892_21915 e48924230130d7069be48e6cd65f339a 91 Pfam PF12759 InsA C-terminal domain 43 88 4.3E-20 T 12-10-2018 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain M892_21140 6b20130d02d242510f14d973a4c73f3e 455 Gene3D G3DSA:3.90.226.10 16 264 8.3E-59 T 12-10-2018 M892_21140 6b20130d02d242510f14d973a4c73f3e 455 Gene3D G3DSA:2.40.50.140 383 455 8.3E-14 T 12-10-2018 M892_21140 6b20130d02d242510f14d973a4c73f3e 455 SUPERFAMILY SSF141322 386 449 4.97E-11 T 12-10-2018 M892_21140 6b20130d02d242510f14d973a4c73f3e 455 Pfam PF01957 NfeD-like C-terminal, partner-binding 313 450 1.3E-35 T 12-10-2018 IPR002810 NfeD-like, C-terminal domain M892_21140 6b20130d02d242510f14d973a4c73f3e 455 SUPERFAMILY SSF52096 8 214 1.67E-25 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily M892_04490 4b5ca8232a4f6ce51f8ac104ecfd3bf2 112 SUPERFAMILY SSF48452 5 109 1.88E-17 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_04490 4b5ca8232a4f6ce51f8ac104ecfd3bf2 112 Pfam PF14559 Tetratricopeptide repeat 19 74 1.4E-8 T 12-10-2018 M892_04490 4b5ca8232a4f6ce51f8ac104ecfd3bf2 112 PIRSF PIRSF017117 1 110 6.9E-40 T 12-10-2018 IPR016684 Type III secretion system chaperone, YscY M892_04490 4b5ca8232a4f6ce51f8ac104ecfd3bf2 112 Gene3D G3DSA:1.25.40.10 2 111 6.0E-13 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_11300 e215ca2214fe5e066bd1903a42fe1729 285 Gene3D G3DSA:1.20.140.160 131 283 7.7E-15 T 12-10-2018 M892_11300 e215ca2214fe5e066bd1903a42fe1729 285 Pfam PF04542 Sigma-70 region 2 53 122 6.4E-17 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 M892_11300 e215ca2214fe5e066bd1903a42fe1729 285 PRINTS PR00046 Major sigma-70 factor signature 267 278 1.1E-18 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 M892_11300 e215ca2214fe5e066bd1903a42fe1729 285 PRINTS PR00046 Major sigma-70 factor signature 77 90 1.1E-18 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 M892_11300 e215ca2214fe5e066bd1903a42fe1729 285 PRINTS PR00046 Major sigma-70 factor signature 233 245 1.1E-18 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 M892_11300 e215ca2214fe5e066bd1903a42fe1729 285 PRINTS PR00046 Major sigma-70 factor signature 252 267 1.1E-18 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 M892_11300 e215ca2214fe5e066bd1903a42fe1729 285 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 252 278 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 M892_11300 e215ca2214fe5e066bd1903a42fe1729 285 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 15 282 2.8E-126 T 12-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 M892_11300 e215ca2214fe5e066bd1903a42fe1729 285 SUPERFAMILY SSF88659 196 281 2.43E-18 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like M892_11300 e215ca2214fe5e066bd1903a42fe1729 285 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 284 53.032 T 12-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 M892_11300 e215ca2214fe5e066bd1903a42fe1729 285 SUPERFAMILY SSF88946 11 122 1.31E-39 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 M892_11300 e215ca2214fe5e066bd1903a42fe1729 285 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 48 280 1.7E-33 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 M892_11300 e215ca2214fe5e066bd1903a42fe1729 285 Gene3D G3DSA:1.20.120.1810 11 122 4.1E-26 T 12-10-2018 M892_11300 e215ca2214fe5e066bd1903a42fe1729 285 Pfam PF04545 Sigma-70, region 4 229 279 2.2E-15 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 M892_11300 e215ca2214fe5e066bd1903a42fe1729 285 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 77 90 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 M892_11300 e215ca2214fe5e066bd1903a42fe1729 285 Pfam PF00140 Sigma-70 factor, region 1.2 14 40 1.7E-7 T 12-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 M892_16675 24eeb7418a85ec1fdf2c1ae24e1159a9 160 SUPERFAMILY SSF55961 21 152 4.47E-17 T 12-10-2018 M892_16675 24eeb7418a85ec1fdf2c1ae24e1159a9 160 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 19 152 6.9E-13 T 12-10-2018 IPR019587 Polyketide cyclase/dehydrase M892_16675 24eeb7418a85ec1fdf2c1ae24e1159a9 160 Gene3D G3DSA:3.30.530.20 1 155 2.9E-42 T 12-10-2018 IPR023393 START-like domain superfamily M892_09365 b0aea4e8c90eb306f9574eb0328e7c2c 417 SUPERFAMILY SSF56801 86 409 7.33E-9 T 12-10-2018 M892_09365 b0aea4e8c90eb306f9574eb0328e7c2c 417 Gene3D G3DSA:3.40.50.12780 7 324 8.3E-38 T 12-10-2018 M892_08940 3de45fc474b2de37f2d5a6d1f99d78a9 338 PIRSF PIRSF500210 1 336 2.4E-129 T 12-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 M892_08940 3de45fc474b2de37f2d5a6d1f99d78a9 338 SUPERFAMILY SSF56655 3 331 1.83E-114 T 12-10-2018 M892_08940 3de45fc474b2de37f2d5a6d1f99d78a9 338 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 5 333 43.161 T 12-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 M892_08940 3de45fc474b2de37f2d5a6d1f99d78a9 338 Gene3D G3DSA:3.30.540.10 4 198 1.1E-76 T 12-10-2018 M892_08940 3de45fc474b2de37f2d5a6d1f99d78a9 338 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 273 285 - T 12-10-2018 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 M892_08940 3de45fc474b2de37f2d5a6d1f99d78a9 338 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 6 197 1.9E-75 T 12-10-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 M892_08940 3de45fc474b2de37f2d5a6d1f99d78a9 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 151 174 2.5E-75 T 12-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 M892_08940 3de45fc474b2de37f2d5a6d1f99d78a9 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 182 205 2.5E-75 T 12-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 M892_08940 3de45fc474b2de37f2d5a6d1f99d78a9 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 307 332 2.5E-75 T 12-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 M892_08940 3de45fc474b2de37f2d5a6d1f99d78a9 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 208 235 2.5E-75 T 12-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 M892_08940 3de45fc474b2de37f2d5a6d1f99d78a9 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 30 57 2.5E-75 T 12-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 M892_08940 3de45fc474b2de37f2d5a6d1f99d78a9 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 67 93 2.5E-75 T 12-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 M892_08940 3de45fc474b2de37f2d5a6d1f99d78a9 338 PIRSF PIRSF000904 2 337 2.2E-126 T 12-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 M892_08940 3de45fc474b2de37f2d5a6d1f99d78a9 338 Gene3D G3DSA:3.40.190.80 200 336 1.9E-60 T 12-10-2018 M892_16980 a2ff13cccfda9a3e16ec44aa1bdb3a0b 440 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 1 303 8.6E-55 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 M892_16980 a2ff13cccfda9a3e16ec44aa1bdb3a0b 440 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 5.9E-22 T 12-10-2018 M892_16980 a2ff13cccfda9a3e16ec44aa1bdb3a0b 440 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 3 22 5.9E-22 T 12-10-2018 M892_16980 a2ff13cccfda9a3e16ec44aa1bdb3a0b 440 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 5.9E-22 T 12-10-2018 M892_16980 a2ff13cccfda9a3e16ec44aa1bdb3a0b 440 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 258 280 5.9E-22 T 12-10-2018 M892_16980 a2ff13cccfda9a3e16ec44aa1bdb3a0b 440 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 149 167 5.9E-22 T 12-10-2018 M892_16980 a2ff13cccfda9a3e16ec44aa1bdb3a0b 440 SUPERFAMILY SSF55424 319 438 1.62E-31 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 M892_16980 a2ff13cccfda9a3e16ec44aa1bdb3a0b 440 Gene3D G3DSA:3.50.50.60 2 336 6.5E-151 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_16980 a2ff13cccfda9a3e16ec44aa1bdb3a0b 440 Gene3D G3DSA:3.50.50.60 111 436 6.5E-151 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_16980 a2ff13cccfda9a3e16ec44aa1bdb3a0b 440 SUPERFAMILY SSF51905 1 312 1.38E-41 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_16980 a2ff13cccfda9a3e16ec44aa1bdb3a0b 440 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 1.0E-16 T 12-10-2018 M892_16980 a2ff13cccfda9a3e16ec44aa1bdb3a0b 440 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 273 280 1.0E-16 T 12-10-2018 M892_16980 a2ff13cccfda9a3e16ec44aa1bdb3a0b 440 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 2 24 1.0E-16 T 12-10-2018 M892_16980 a2ff13cccfda9a3e16ec44aa1bdb3a0b 440 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 149 174 1.0E-16 T 12-10-2018 M892_16980 a2ff13cccfda9a3e16ec44aa1bdb3a0b 440 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 327 428 5.1E-17 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 M892_00790 09bd37696dc2f3e31e162a1322375723 397 SUPERFAMILY SSF56796 25 394 1.2E-107 T 12-10-2018 M892_00790 09bd37696dc2f3e31e162a1322375723 397 Pfam PF00465 Iron-containing alcohol dehydrogenase 27 387 6.9E-104 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 M892_00790 09bd37696dc2f3e31e162a1322375723 397 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 276 296 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 M892_00790 09bd37696dc2f3e31e162a1322375723 397 Gene3D G3DSA:1.20.1090.10 201 395 2.2E-51 T 12-10-2018 M892_00790 09bd37696dc2f3e31e162a1322375723 397 Gene3D G3DSA:3.40.50.1970 12 200 6.7E-53 T 12-10-2018 M892_24630 8dc080f465211423b09c820a32851ba0 104 ProDom PD030876 UPF0265 YEEX HELIX ALPHA BFL460 UNCHARACTERIZED FN0411 HI1168 VPA1226 BCR 1 92 7.0E-45 T 12-10-2018 IPR007458 Protein of unknown function DUF496 M892_24630 8dc080f465211423b09c820a32851ba0 104 Hamap MF_00683 UPF0265 protein YeeX [yeeX]. 1 95 23.937 T 12-10-2018 IPR007458 Protein of unknown function DUF496 M892_24630 8dc080f465211423b09c820a32851ba0 104 PIRSF PIRSF028773 1 104 1.4E-45 T 12-10-2018 IPR007458 Protein of unknown function DUF496 M892_24630 8dc080f465211423b09c820a32851ba0 104 Pfam PF04363 Protein of unknown function (DUF496) 1 92 7.1E-42 T 12-10-2018 IPR007458 Protein of unknown function DUF496 M892_23200 03d4c22b7503572f934bd638ea2c5556 146 Pfam PF13778 Domain of unknown function (DUF4174) 25 136 5.1E-26 T 12-10-2018 IPR025232 Domain of unknown function DUF4174 M892_23725 a72158a84e72e33e9d82ce3ff4cfd727 413 SUPERFAMILY SSF47384 205 282 1.22E-11 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M892_23725 a72158a84e72e33e9d82ce3ff4cfd727 413 SMART SM00388 220 286 7.6E-10 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M892_23725 a72158a84e72e33e9d82ce3ff4cfd727 413 Pfam PF00512 His Kinase A (phospho-acceptor) domain 222 283 5.4E-9 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M892_23725 a72158a84e72e33e9d82ce3ff4cfd727 413 Gene3D G3DSA:1.10.287.130 228 283 1.4E-12 T 12-10-2018 M892_23725 a72158a84e72e33e9d82ce3ff4cfd727 413 SUPERFAMILY SSF55874 295 400 1.86E-8 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_23725 a72158a84e72e33e9d82ce3ff4cfd727 413 Gene3D G3DSA:3.30.565.10 284 355 1.4E-12 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_04005 1262244507230fb4b8bcf447991d40c0 204 Pfam PF00117 Glutamine amidotransferase class-I 8 202 1.6E-17 T 12-10-2018 IPR017926 Glutamine amidotransferase M892_04005 1262244507230fb4b8bcf447991d40c0 204 Gene3D G3DSA:3.40.50.880 2 204 1.1E-72 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M892_04005 1262244507230fb4b8bcf447991d40c0 204 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 5 204 33.71 T 12-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 M892_04005 1262244507230fb4b8bcf447991d40c0 204 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 6 203 1.3E-68 T 12-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 M892_04005 1262244507230fb4b8bcf447991d40c0 204 SUPERFAMILY SSF52317 5 203 9.02E-53 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M892_04005 1262244507230fb4b8bcf447991d40c0 204 PIRSF PIRSF000495 4 204 1.7E-64 T 12-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 M892_23185 299366f72238cdc22d18efde1e78f125 538 SUPERFAMILY SSF58104 229 538 7.59E-70 T 12-10-2018 M892_23185 299366f72238cdc22d18efde1e78f125 538 SMART SM01049 35 127 9.8E-29 T 12-10-2018 IPR033480 Single Cache domain 2 M892_23185 299366f72238cdc22d18efde1e78f125 538 SMART SM00304 209 261 4.3E-11 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M892_23185 299366f72238cdc22d18efde1e78f125 538 Pfam PF00672 HAMP domain 210 257 1.2E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M892_23185 299366f72238cdc22d18efde1e78f125 538 Gene3D G3DSA:3.30.450.20 37 185 2.9E-44 T 12-10-2018 M892_23185 299366f72238cdc22d18efde1e78f125 538 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 4.1E-23 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M892_23185 299366f72238cdc22d18efde1e78f125 538 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 403 432 4.1E-23 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M892_23185 299366f72238cdc22d18efde1e78f125 538 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 374 401 4.1E-23 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M892_23185 299366f72238cdc22d18efde1e78f125 538 Pfam PF17200 Single Cache domain 2 40 185 1.0E-36 T 12-10-2018 IPR033480 Single Cache domain 2 M892_23185 299366f72238cdc22d18efde1e78f125 538 Gene3D G3DSA:1.10.287.950 208 538 1.9E-70 T 12-10-2018 M892_23185 299366f72238cdc22d18efde1e78f125 538 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 324 501 9.9E-41 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M892_23185 299366f72238cdc22d18efde1e78f125 538 SMART SM00283 276 537 1.8E-60 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M892_14775 f0398548ba6fdc89cf351cd5b5abee45 641 Pfam PF16124 RecQ zinc-binding 512 559 7.9E-9 T 12-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain M892_14775 f0398548ba6fdc89cf351cd5b5abee45 641 Gene3D G3DSA:3.40.50.300 202 450 5.5E-44 T 12-10-2018 M892_14775 f0398548ba6fdc89cf351cd5b5abee45 641 Pfam PF00270 DEAD/DEAH box helicase 22 181 2.6E-16 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 M892_14775 f0398548ba6fdc89cf351cd5b5abee45 641 Gene3D G3DSA:1.10.10.10 496 640 4.7E-14 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_14775 f0398548ba6fdc89cf351cd5b5abee45 641 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 134 143 - T 12-10-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site M892_14775 f0398548ba6fdc89cf351cd5b5abee45 641 SMART SM00490 245 326 3.7E-27 T 12-10-2018 IPR001650 Helicase, C-terminal M892_14775 f0398548ba6fdc89cf351cd5b5abee45 641 SMART SM00487 15 211 2.2E-25 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain M892_14775 f0398548ba6fdc89cf351cd5b5abee45 641 Pfam PF00271 Helicase conserved C-terminal domain 231 325 5.3E-18 T 12-10-2018 IPR001650 Helicase, C-terminal M892_14775 f0398548ba6fdc89cf351cd5b5abee45 641 Gene3D G3DSA:3.40.50.300 1 201 2.0E-68 T 12-10-2018 M892_14775 f0398548ba6fdc89cf351cd5b5abee45 641 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 9 350 5.3E-113 T 12-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 M892_14775 f0398548ba6fdc89cf351cd5b5abee45 641 SUPERFAMILY SSF52540 60 338 1.5E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_19165 b718faeaa4e44420ebbe9ad8e99d26b4 162 Pfam PF00583 Acetyltransferase (GNAT) family 33 149 7.2E-16 T 12-10-2018 IPR000182 GNAT domain M892_19165 b718faeaa4e44420ebbe9ad8e99d26b4 162 Gene3D G3DSA:3.40.630.30 6 162 5.8E-28 T 12-10-2018 M892_19165 b718faeaa4e44420ebbe9ad8e99d26b4 162 SUPERFAMILY SSF55729 2 154 3.04E-23 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_19975 16ffe10f0be125b6b7ee6afba3f346e9 714 Gene3D G3DSA:3.90.70.10 25 128 6.6E-8 T 12-10-2018 M892_19975 16ffe10f0be125b6b7ee6afba3f346e9 714 ProSitePatterns PS00211 ABC transporters family signature. 598 612 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_19975 16ffe10f0be125b6b7ee6afba3f346e9 714 SMART SM00382 486 672 9.0E-19 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_19975 16ffe10f0be125b6b7ee6afba3f346e9 714 TIGRFAM TIGR01846 type_I_sec_HlyB: type I secretion system ATPase 56 697 6.8E-243 T 12-10-2018 IPR010132 ATPase, type I secretion system, HlyB GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 M892_19975 16ffe10f0be125b6b7ee6afba3f346e9 714 Pfam PF00005 ABC transporter 477 626 2.4E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_19975 16ffe10f0be125b6b7ee6afba3f346e9 714 SUPERFAMILY SSF90123 132 444 2.49E-65 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 M892_19975 16ffe10f0be125b6b7ee6afba3f346e9 714 Gene3D G3DSA:3.40.50.300 456 709 7.8E-88 T 12-10-2018 M892_19975 16ffe10f0be125b6b7ee6afba3f346e9 714 Gene3D G3DSA:1.20.1560.10 133 447 1.4E-72 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 M892_19975 16ffe10f0be125b6b7ee6afba3f346e9 714 SUPERFAMILY SSF52540 452 696 1.7E-86 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_19975 16ffe10f0be125b6b7ee6afba3f346e9 714 Pfam PF00664 ABC transporter transmembrane region 148 415 8.4E-52 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 M892_15205 de0da78659b1e7d6ea13b146bc1938a1 376 PRINTS PR00207 Flagellin signature 37 54 3.4E-26 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 M892_15205 de0da78659b1e7d6ea13b146bc1938a1 376 PRINTS PR00207 Flagellin signature 111 134 3.4E-26 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 M892_15205 de0da78659b1e7d6ea13b146bc1938a1 376 PRINTS PR00207 Flagellin signature 76 95 3.4E-26 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 M892_15205 de0da78659b1e7d6ea13b146bc1938a1 376 Pfam PF00700 Bacterial flagellin C-terminal helical region 291 375 5.2E-26 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 M892_15205 de0da78659b1e7d6ea13b146bc1938a1 376 SUPERFAMILY SSF64518 1 375 8.5E-95 T 12-10-2018 M892_15205 de0da78659b1e7d6ea13b146bc1938a1 376 Pfam PF07196 Flagellin hook IN motif 195 248 6.2E-10 T 12-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 M892_15205 de0da78659b1e7d6ea13b146bc1938a1 376 Gene3D G3DSA:1.20.1330.10 44 326 1.7E-76 T 12-10-2018 M892_15205 de0da78659b1e7d6ea13b146bc1938a1 376 Gene3D G3DSA:3.30.70.2120 174 274 1.7E-76 T 12-10-2018 M892_15205 de0da78659b1e7d6ea13b146bc1938a1 376 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 1.1E-41 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 M892_15205 de0da78659b1e7d6ea13b146bc1938a1 376 Gene3D G3DSA:1.10.8.410 327 375 2.8E-20 T 12-10-2018 M892_26435 c9b9ecedbf0f7a7bda1e95d827b6a70c 235 Pfam PF02567 Phenazine biosynthesis-like protein 1 203 1.5E-34 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 M892_26435 c9b9ecedbf0f7a7bda1e95d827b6a70c 235 Gene3D G3DSA:3.10.310.10 92 228 1.2E-56 T 12-10-2018 M892_26435 c9b9ecedbf0f7a7bda1e95d827b6a70c 235 Gene3D G3DSA:3.10.310.10 1 231 1.2E-56 T 12-10-2018 M892_26435 c9b9ecedbf0f7a7bda1e95d827b6a70c 235 PIRSF PIRSF016184 1 234 1.1E-39 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 M892_26435 c9b9ecedbf0f7a7bda1e95d827b6a70c 235 SUPERFAMILY SSF54506 1 231 4.19E-46 T 12-10-2018 M892_12670 dbd6223dcc20746a147d0eb97bc5fc7c 940 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_12670 dbd6223dcc20746a147d0eb97bc5fc7c 940 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 3 923 0.0 T 12-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 M892_12670 dbd6223dcc20746a147d0eb97bc5fc7c 940 Gene3D G3DSA:3.40.50.300 6 593 1.3E-245 T 12-10-2018 M892_12670 dbd6223dcc20746a147d0eb97bc5fc7c 940 Gene3D G3DSA:3.30.190.20 130 243 1.3E-245 T 12-10-2018 M892_12670 dbd6223dcc20746a147d0eb97bc5fc7c 940 ProSitePatterns PS00211 ABC transporters family signature. 829 843 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_12670 dbd6223dcc20746a147d0eb97bc5fc7c 940 Gene3D G3DSA:1.20.1580.10 691 829 1.1E-140 T 12-10-2018 M892_12670 dbd6223dcc20746a147d0eb97bc5fc7c 940 Pfam PF00005 ABC transporter 622 859 6.7E-10 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_12670 dbd6223dcc20746a147d0eb97bc5fc7c 940 Gene3D G3DSA:1.10.8.280 286 402 1.3E-245 T 12-10-2018 M892_12670 dbd6223dcc20746a147d0eb97bc5fc7c 940 Gene3D G3DSA:3.40.50.300 616 935 1.1E-140 T 12-10-2018 M892_12670 dbd6223dcc20746a147d0eb97bc5fc7c 940 Gene3D G3DSA:1.20.1580.10 90 491 1.3E-245 T 12-10-2018 M892_12670 dbd6223dcc20746a147d0eb97bc5fc7c 940 SUPERFAMILY SSF52540 620 912 5.19E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_12670 dbd6223dcc20746a147d0eb97bc5fc7c 940 SUPERFAMILY SSF52540 4 568 1.97E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_12670 dbd6223dcc20746a147d0eb97bc5fc7c 940 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 939 22.968 T 12-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 M892_24055 d03b33b9b55d498ceea1cb37ef806702 384 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 2.8E-28 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 M892_24055 d03b33b9b55d498ceea1cb37ef806702 384 Gene3D G3DSA:2.40.110.10 121 232 4.0E-42 T 12-10-2018 M892_24055 d03b33b9b55d498ceea1cb37ef806702 384 SUPERFAMILY SSF47203 225 378 2.9E-60 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 M892_24055 d03b33b9b55d498ceea1cb37ef806702 384 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 215 4.2E-26 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 M892_24055 d03b33b9b55d498ceea1cb37ef806702 384 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 335 354 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 M892_24055 d03b33b9b55d498ceea1cb37ef806702 384 Gene3D G3DSA:1.10.540.10 1 118 3.5E-35 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 M892_24055 d03b33b9b55d498ceea1cb37ef806702 384 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 377 5.8E-51 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 M892_24055 d03b33b9b55d498ceea1cb37ef806702 384 Gene3D G3DSA:1.20.140.10 233 379 5.3E-55 T 12-10-2018 M892_24055 d03b33b9b55d498ceea1cb37ef806702 384 PIRSF PIRSF016578 207 382 7.0E-14 T 12-10-2018 M892_24055 d03b33b9b55d498ceea1cb37ef806702 384 PIRSF PIRSF016578 4 193 4.2E-11 T 12-10-2018 M892_24055 d03b33b9b55d498ceea1cb37ef806702 384 SUPERFAMILY SSF56645 1 240 4.58E-81 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 M892_24055 d03b33b9b55d498ceea1cb37ef806702 384 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 M892_19525 5d46f570ebb2ccc7f889e6a2e17e1d7c 169 Gene3D G3DSA:2.40.128.640 61 168 2.5E-40 T 12-10-2018 M892_19525 5d46f570ebb2ccc7f889e6a2e17e1d7c 169 Pfam PF04170 NlpE N-terminal domain 74 158 3.5E-29 T 12-10-2018 IPR007298 Copper resistance lipoprotein NlpE M892_06425 bd0cafc97fc8b31dfad39ae0765c9f90 275 Pfam PF00106 short chain dehydrogenase 3 187 6.9E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_06425 bd0cafc97fc8b31dfad39ae0765c9f90 275 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 M892_06425 bd0cafc97fc8b31dfad39ae0765c9f90 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 3.7E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_06425 bd0cafc97fc8b31dfad39ae0765c9f90 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 3.7E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_06425 bd0cafc97fc8b31dfad39ae0765c9f90 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 3.7E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_06425 bd0cafc97fc8b31dfad39ae0765c9f90 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 3.7E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_06425 bd0cafc97fc8b31dfad39ae0765c9f90 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.7E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_06425 bd0cafc97fc8b31dfad39ae0765c9f90 275 Gene3D G3DSA:3.40.50.720 2 264 2.4E-58 T 12-10-2018 M892_06425 bd0cafc97fc8b31dfad39ae0765c9f90 275 SUPERFAMILY SSF51735 2 270 5.91E-54 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_01715 06b6f459418b45e4554b452dfd413627 577 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 558 577 0.0021 T 12-10-2018 IPR020008 GlyGly-CTERM domain M892_01715 06b6f459418b45e4554b452dfd413627 577 Pfam PF11949 Protein of unknown function (DUF3466) 5 198 9.6E-9 T 12-10-2018 IPR022562 Protein of unknown function DUF3466 M892_01715 06b6f459418b45e4554b452dfd413627 577 Pfam PF11949 Protein of unknown function (DUF3466) 254 577 2.4E-55 T 12-10-2018 IPR022562 Protein of unknown function DUF3466 M892_18595 32f3cd5a3c9550c07b72a249e11871de 514 Pfam PF13005 zinc-finger binding domain of transposase IS66 120 164 1.6E-16 T 12-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 M892_18595 32f3cd5a3c9550c07b72a249e11871de 514 Pfam PF13817 IS66 C-terminal element 474 510 7.6E-8 T 12-10-2018 IPR039552 Transposase IS66, C-terminal M892_18595 32f3cd5a3c9550c07b72a249e11871de 514 Pfam PF03050 Transposase IS66 family 184 467 2.1E-99 T 12-10-2018 IPR004291 Transposase, IS66 M892_18595 32f3cd5a3c9550c07b72a249e11871de 514 Pfam PF13007 Transposase C of IS166 homeodomain 42 112 2.2E-14 T 12-10-2018 IPR024463 Transposase TnpC, homeodomain M892_17225 043c5e0ddad119c906325bb278b884f6 207 Gene3D G3DSA:1.25.40.10 44 116 1.4E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_17225 043c5e0ddad119c906325bb278b884f6 207 Gene3D G3DSA:1.25.40.10 117 206 1.8E-26 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_17225 043c5e0ddad119c906325bb278b884f6 207 SUPERFAMILY SSF48452 75 190 6.83E-13 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_16625 b8e64e29351dd7f254b048e51166cf14 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 3.9E-25 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_16625 b8e64e29351dd7f254b048e51166cf14 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 3.9E-25 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_16625 b8e64e29351dd7f254b048e51166cf14 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 3.9E-25 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_16625 b8e64e29351dd7f254b048e51166cf14 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 3.9E-25 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_16625 b8e64e29351dd7f254b048e51166cf14 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 3.9E-25 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_16625 b8e64e29351dd7f254b048e51166cf14 248 Gene3D G3DSA:3.40.50.720 1 246 2.9E-70 T 12-10-2018 M892_16625 b8e64e29351dd7f254b048e51166cf14 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 165 184 3.7E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_16625 b8e64e29351dd7f254b048e51166cf14 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 153 3.7E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_16625 b8e64e29351dd7f254b048e51166cf14 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 91 102 3.7E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_16625 b8e64e29351dd7f254b048e51166cf14 248 Pfam PF00106 short chain dehydrogenase 13 208 6.2E-52 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_16625 b8e64e29351dd7f254b048e51166cf14 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 13 178 0.0019 T 12-10-2018 M892_16625 b8e64e29351dd7f254b048e51166cf14 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 M892_16625 b8e64e29351dd7f254b048e51166cf14 248 SUPERFAMILY SSF51735 9 242 1.68E-63 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_23590 93e87a3421b09fdf8195c8afd1b95e67 439 Gene3D G3DSA:3.10.450.350 161 265 4.1E-36 T 12-10-2018 M892_23590 93e87a3421b09fdf8195c8afd1b95e67 439 Pfam PF01551 Peptidase family M23 297 390 1.1E-29 T 12-10-2018 IPR016047 Peptidase M23 M892_23590 93e87a3421b09fdf8195c8afd1b95e67 439 SUPERFAMILY SSF51261 144 392 3.3E-63 T 12-10-2018 IPR011055 Duplicated hybrid motif M892_23590 93e87a3421b09fdf8195c8afd1b95e67 439 Gene3D G3DSA:3.10.450.350 68 160 9.9E-28 T 12-10-2018 M892_23590 93e87a3421b09fdf8195c8afd1b95e67 439 Gene3D G3DSA:2.70.70.10 266 397 5.3E-52 T 12-10-2018 IPR011055 Duplicated hybrid motif M892_14420 967363ec2aef0136929d86cd968fb0ae 157 SUPERFAMILY SSF49785 2 157 6.94E-43 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily M892_14420 967363ec2aef0136929d86cd968fb0ae 157 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 28 157 2.2E-35 T 12-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 M892_14420 967363ec2aef0136929d86cd968fb0ae 157 Gene3D G3DSA:2.60.120.260 1 157 2.5E-50 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily M892_12905 1a0e12a478278d6781d74069e69b7f62 267 Pfam PF00005 ABC transporter 23 170 3.4E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_12905 1a0e12a478278d6781d74069e69b7f62 267 SUPERFAMILY SSF52540 6 236 5.32E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_12905 1a0e12a478278d6781d74069e69b7f62 267 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_12905 1a0e12a478278d6781d74069e69b7f62 267 Gene3D G3DSA:3.40.50.300 4 256 8.7E-67 T 12-10-2018 M892_12905 1a0e12a478278d6781d74069e69b7f62 267 SMART SM00382 31 237 8.1E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_00760 e6caa30979db93aad294cd7112b7748b 378 Gene3D G3DSA:3.40.190.10 237 335 4.9E-38 T 12-10-2018 M892_00760 e6caa30979db93aad294cd7112b7748b 378 Gene3D G3DSA:1.10.10.10 62 149 3.2E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_00760 e6caa30979db93aad294cd7112b7748b 378 SUPERFAMILY SSF53850 152 361 1.99E-31 T 12-10-2018 M892_00760 e6caa30979db93aad294cd7112b7748b 378 SUPERFAMILY SSF46785 66 146 4.42E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_00760 e6caa30979db93aad294cd7112b7748b 378 Gene3D G3DSA:3.40.190.10 152 359 4.9E-38 T 12-10-2018 M892_00760 e6caa30979db93aad294cd7112b7748b 378 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 71 129 5.3E-14 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_00760 e6caa30979db93aad294cd7112b7748b 378 Pfam PF03466 LysR substrate binding domain 158 364 6.5E-15 T 12-10-2018 IPR005119 LysR, substrate-binding M892_16375 d0f32e51cefccc37a635d94f04512ebb 339 SUPERFAMILY SSF55174 44 96 5.38E-9 T 12-10-2018 M892_16375 d0f32e51cefccc37a635d94f04512ebb 339 Pfam PF01479 S4 domain 45 91 3.2E-10 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_16375 d0f32e51cefccc37a635d94f04512ebb 339 Gene3D G3DSA:3.10.290.10 33 100 3.3E-17 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 M892_16375 d0f32e51cefccc37a635d94f04512ebb 339 Gene3D G3DSA:3.30.2350.10 118 339 5.4E-79 T 12-10-2018 M892_16375 d0f32e51cefccc37a635d94f04512ebb 339 SUPERFAMILY SSF55120 116 332 2.4E-64 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 M892_16375 d0f32e51cefccc37a635d94f04512ebb 339 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 41 336 2.1E-92 T 12-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 M892_16375 d0f32e51cefccc37a635d94f04512ebb 339 Pfam PF00849 RNA pseudouridylate synthase 127 272 7.6E-32 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 M892_16375 d0f32e51cefccc37a635d94f04512ebb 339 SMART SM00363 45 102 1.6E-8 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_16375 d0f32e51cefccc37a635d94f04512ebb 339 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 166 180 - T 12-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 M892_10735 394e4f3487c54dae1559aadad69a867a 92 Pfam PF06288 Protein of unknown function (DUF1040) 5 90 4.2E-45 T 12-10-2018 IPR009383 Protein of unknown function DUF1040 M892_10735 394e4f3487c54dae1559aadad69a867a 92 Gene3D G3DSA:1.10.1580.20 5 92 5.0E-43 T 12-10-2018 IPR038134 YihD-like superfamily M892_10735 394e4f3487c54dae1559aadad69a867a 92 ProDom PD029038 YIHD CYTOPLASMIC ENZYME Y3814 GLYCOGEN YPO0013A HI0845 DIRECT ORF1 UNCHARACTERIZED 5 91 6.0E-36 T 12-10-2018 IPR009383 Protein of unknown function DUF1040 M892_25490 83926756cb70d88f292fabe4400a84e8 576 Gene3D G3DSA:1.20.1560.10 9 314 4.5E-26 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 M892_25490 83926756cb70d88f292fabe4400a84e8 576 SUPERFAMILY SSF90123 22 311 8.37E-36 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 M892_25490 83926756cb70d88f292fabe4400a84e8 576 ProSitePatterns PS00211 ABC transporters family signature. 467 481 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_25490 83926756cb70d88f292fabe4400a84e8 576 SUPERFAMILY SSF52540 319 554 4.89E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_25490 83926756cb70d88f292fabe4400a84e8 576 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 26 556 3.7E-183 T 12-10-2018 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 M892_25490 83926756cb70d88f292fabe4400a84e8 576 SMART SM00382 356 568 1.2E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_25490 83926756cb70d88f292fabe4400a84e8 576 Pfam PF00005 ABC transporter 347 494 6.8E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_25490 83926756cb70d88f292fabe4400a84e8 576 Gene3D G3DSA:3.40.50.300 315 560 2.8E-64 T 12-10-2018 M892_00420 aa3cb0a8de2719a94fa5f0fb44c99eed 326 SUPERFAMILY SSF47413 2 65 1.06E-6 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 M892_00420 aa3cb0a8de2719a94fa5f0fb44c99eed 326 Gene3D G3DSA:1.10.260.40 1 66 6.5E-9 T 12-10-2018 M892_08825 eb8ad923306ea88e41e44739866f5932 335 Gene3D G3DSA:3.40.718.10 3 335 9.7E-121 T 12-10-2018 M892_08825 eb8ad923306ea88e41e44739866f5932 335 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 9 334 36.124 T 12-10-2018 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GO:0042823|GO:0050570 KEGG: 00750+1.1.1.262 M892_08825 eb8ad923306ea88e41e44739866f5932 335 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 11 330 2.9E-126 T 12-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 M892_08825 eb8ad923306ea88e41e44739866f5932 335 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 38 327 1.1E-105 T 12-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 M892_08825 eb8ad923306ea88e41e44739866f5932 335 SUPERFAMILY SSF53659 9 333 5.6E-110 T 12-10-2018 M892_24730 034295033afe45ccc9086d6db157a89c 400 SUPERFAMILY SSF111369 63 174 2.62E-7 T 12-10-2018 M892_24730 034295033afe45ccc9086d6db157a89c 400 Gene3D G3DSA:1.10.287.470 167 248 1.5E-17 T 12-10-2018 M892_24730 034295033afe45ccc9086d6db157a89c 400 Gene3D G3DSA:2.40.50.100 249 281 1.5E-17 T 12-10-2018 M892_24730 034295033afe45ccc9086d6db157a89c 400 Gene3D G3DSA:1.10.287.470 100 151 5.3E-9 T 12-10-2018 M892_24730 034295033afe45ccc9086d6db157a89c 400 Gene3D G3DSA:2.40.50.100 72 99 5.3E-9 T 12-10-2018 M892_24730 034295033afe45ccc9086d6db157a89c 400 SUPERFAMILY SSF111369 200 292 2.22E-7 T 12-10-2018 M892_24730 034295033afe45ccc9086d6db157a89c 400 Pfam PF13533 Biotin-lipoyl like 72 110 1.1E-10 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain M892_24730 034295033afe45ccc9086d6db157a89c 400 Gene3D G3DSA:2.40.30.170 282 329 1.5E-17 T 12-10-2018 M892_06020 b576afc194e2a4096d5e8b353935c99e 50 Pfam PF03471 Transporter associated domain 10 50 4.0E-5 T 12-10-2018 IPR005170 Transporter-associated domain M892_06020 b576afc194e2a4096d5e8b353935c99e 50 SUPERFAMILY SSF56176 10 50 4.64E-7 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 M892_06020 b576afc194e2a4096d5e8b353935c99e 50 Gene3D G3DSA:3.30.465.10 2 50 1.9E-9 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 M892_13835 513a84aa0f15e555863a69ea19bd8330 300 Pfam PF02569 Pantoate-beta-alanine ligase 3 278 8.2E-100 T 12-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 M892_13835 513a84aa0f15e555863a69ea19bd8330 300 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 39.843 T 12-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 M892_13835 513a84aa0f15e555863a69ea19bd8330 300 SUPERFAMILY SSF52374 1 280 8.76E-106 T 12-10-2018 M892_13835 513a84aa0f15e555863a69ea19bd8330 300 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 281 4.5E-103 T 12-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 M892_13835 513a84aa0f15e555863a69ea19bd8330 300 Gene3D G3DSA:3.40.50.620 1 179 2.9E-79 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M892_13835 513a84aa0f15e555863a69ea19bd8330 300 Gene3D G3DSA:3.30.1300.10 181 283 1.3E-26 T 12-10-2018 M892_13835 513a84aa0f15e555863a69ea19bd8330 300 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 24 62 2.0E-8 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 M892_06275 deeb7cc9fe8ce9746ff529a1a2c8ef56 429 PIRSF PIRSF001369 38 429 1.5E-174 T 12-10-2018 IPR024176 Citrate synthase, bacterial-type M892_06275 deeb7cc9fe8ce9746ff529a1a2c8ef56 429 Pfam PF00285 Citrate synthase, C-terminal domain 49 411 1.0E-134 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 M892_06275 deeb7cc9fe8ce9746ff529a1a2c8ef56 429 Gene3D G3DSA:1.10.230.10 268 376 3.0E-150 T 12-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain M892_06275 deeb7cc9fe8ce9746ff529a1a2c8ef56 429 PRINTS PR00143 Citrate synthase signature 296 316 2.7E-55 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 M892_06275 deeb7cc9fe8ce9746ff529a1a2c8ef56 429 PRINTS PR00143 Citrate synthase signature 379 393 2.7E-55 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 M892_06275 deeb7cc9fe8ce9746ff529a1a2c8ef56 429 PRINTS PR00143 Citrate synthase signature 219 234 2.7E-55 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 M892_06275 deeb7cc9fe8ce9746ff529a1a2c8ef56 429 PRINTS PR00143 Citrate synthase signature 241 269 2.7E-55 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 M892_06275 deeb7cc9fe8ce9746ff529a1a2c8ef56 429 PRINTS PR00143 Citrate synthase signature 359 375 2.7E-55 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 M892_06275 deeb7cc9fe8ce9746ff529a1a2c8ef56 429 PRINTS PR00143 Citrate synthase signature 165 178 2.7E-55 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 M892_06275 deeb7cc9fe8ce9746ff529a1a2c8ef56 429 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 16 422 1.8E-238 T 12-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 M892_06275 deeb7cc9fe8ce9746ff529a1a2c8ef56 429 Gene3D G3DSA:2.20.28.60 1 50 3.8E-26 T 12-10-2018 M892_06275 deeb7cc9fe8ce9746ff529a1a2c8ef56 429 Gene3D G3DSA:1.10.580.10 57 411 3.0E-150 T 12-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 M892_06275 deeb7cc9fe8ce9746ff529a1a2c8ef56 429 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 12-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 M892_06275 deeb7cc9fe8ce9746ff529a1a2c8ef56 429 SUPERFAMILY SSF48256 4 428 1.2E-169 T 12-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 M892_05060 58784f3ee847ef8f6785e003c319d639 353 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 28 341 2.3E-113 T 12-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 M892_05060 58784f3ee847ef8f6785e003c319d639 353 Gene3D G3DSA:3.40.50.10800 200 295 4.9E-93 T 12-10-2018 M892_05060 58784f3ee847ef8f6785e003c319d639 353 Gene3D G3DSA:3.40.50.10800 115 340 4.9E-93 T 12-10-2018 M892_05060 58784f3ee847ef8f6785e003c319d639 353 Gene3D G3DSA:3.40.50.10800 31 322 4.9E-93 T 12-10-2018 M892_05060 58784f3ee847ef8f6785e003c319d639 353 SUPERFAMILY SSF142754 28 341 8.37E-105 T 12-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 M892_05060 58784f3ee847ef8f6785e003c319d639 353 Pfam PF02445 Quinolinate synthetase A protein 31 340 3.6E-101 T 12-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 M892_05060 58784f3ee847ef8f6785e003c319d639 353 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 347 66.294 T 12-10-2018 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 M892_04080 bc6fe8409473e7e6c35fbb85c81d6e7d 418 Gene3D G3DSA:3.40.50.150 149 418 2.4E-99 T 12-10-2018 M892_04080 bc6fe8409473e7e6c35fbb85c81d6e7d 418 SUPERFAMILY SSF53335 21 371 1.04E-90 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M892_04080 bc6fe8409473e7e6c35fbb85c81d6e7d 418 PIRSF PIRSF003085 20 418 7.4E-120 T 12-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 M892_04080 bc6fe8409473e7e6c35fbb85c81d6e7d 418 Pfam PF02353 Mycolic acid cyclopropane synthetase 142 411 2.0E-80 T 12-10-2018 M892_26585 cd299b5d6176fedcf02b8d97bf8da78f 261 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 258 3.0E-27 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain M892_26585 cd299b5d6176fedcf02b8d97bf8da78f 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 136 3.9E-46 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G M892_26585 cd299b5d6176fedcf02b8d97bf8da78f 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 148 243 7.3E-33 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G M892_26585 cd299b5d6176fedcf02b8d97bf8da78f 261 Pfam PF00460 Flagella basal body rod protein 5 35 4.6E-11 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 M892_26585 cd299b5d6176fedcf02b8d97bf8da78f 261 SUPERFAMILY SSF117143 93 222 1.44E-36 T 12-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like M892_26585 cd299b5d6176fedcf02b8d97bf8da78f 261 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 260 4.2E-118 T 12-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 M892_26585 cd299b5d6176fedcf02b8d97bf8da78f 261 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site M892_21500 365c9c7886056bbe72f1dfa4812581ba 314 Pfam PF01926 50S ribosome-binding GTPase 120 184 2.0E-14 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 M892_21500 365c9c7886056bbe72f1dfa4812581ba 314 SUPERFAMILY SSF52540 12 187 8.63E-41 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_21500 365c9c7886056bbe72f1dfa4812581ba 314 Gene3D G3DSA:1.10.1580.10 177 268 3.8E-29 T 12-10-2018 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily M892_21500 365c9c7886056bbe72f1dfa4812581ba 314 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 6 275 1.2E-107 T 12-10-2018 IPR019991 GTP-binding protein, ribosome biogenesis M892_21500 365c9c7886056bbe72f1dfa4812581ba 314 Gene3D G3DSA:3.40.50.300 6 174 2.0E-44 T 12-10-2018 M892_21500 365c9c7886056bbe72f1dfa4812581ba 314 PIRSF PIRSF006230 2 280 1.3E-104 T 12-10-2018 IPR016478 GTPase, MTG1 M892_16210 71410dfe8b9ef7eb5f7657d4e5df55e2 170 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 72 85 - T 12-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 M892_16210 71410dfe8b9ef7eb5f7657d4e5df55e2 170 SMART SM00852 14 158 4.7E-27 T 12-10-2018 IPR001453 MoaB/Mog domain M892_16210 71410dfe8b9ef7eb5f7657d4e5df55e2 170 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 7 168 1.4E-84 T 12-10-2018 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 M892_16210 71410dfe8b9ef7eb5f7657d4e5df55e2 170 Pfam PF00994 Probable molybdopterin binding domain 14 156 1.6E-33 T 12-10-2018 IPR001453 MoaB/Mog domain M892_16210 71410dfe8b9ef7eb5f7657d4e5df55e2 170 Gene3D G3DSA:3.40.980.10 2 170 2.6E-51 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily M892_16210 71410dfe8b9ef7eb5f7657d4e5df55e2 170 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 12 152 4.1E-36 T 12-10-2018 IPR001453 MoaB/Mog domain M892_16210 71410dfe8b9ef7eb5f7657d4e5df55e2 170 PIRSF PIRSF006443 1 166 5.5E-66 T 12-10-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 M892_16210 71410dfe8b9ef7eb5f7657d4e5df55e2 170 SUPERFAMILY SSF53218 7 168 6.15E-47 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily M892_16950 501a4c19e064ad42c00039369614c997 698 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 504 661 7.4E-41 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M892_16950 501a4c19e064ad42c00039369614c997 698 SMART SM00304 366 420 2.2E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M892_16950 501a4c19e064ad42c00039369614c997 698 Gene3D G3DSA:3.30.450.20 66 322 8.2E-24 T 12-10-2018 M892_16950 501a4c19e064ad42c00039369614c997 698 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 456 485 5.4E-22 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M892_16950 501a4c19e064ad42c00039369614c997 698 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 562 591 5.4E-22 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M892_16950 501a4c19e064ad42c00039369614c997 698 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 533 560 5.4E-22 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M892_16950 501a4c19e064ad42c00039369614c997 698 Gene3D G3DSA:3.30.450.20 72 226 8.2E-24 T 12-10-2018 M892_16950 501a4c19e064ad42c00039369614c997 698 SUPERFAMILY SSF58104 388 697 2.35E-71 T 12-10-2018 M892_16950 501a4c19e064ad42c00039369614c997 698 SMART SM00283 435 696 4.7E-60 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M892_16950 501a4c19e064ad42c00039369614c997 698 Gene3D G3DSA:1.10.287.950 366 698 1.5E-65 T 12-10-2018 M892_13725 189245577cbf72b2818ececb63925f3c 204 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 197 28.116 T 12-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 M892_13725 189245577cbf72b2818ececb63925f3c 204 SUPERFAMILY SSF52540 1 193 1.0E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_13725 189245577cbf72b2818ececb63925f3c 204 Gene3D G3DSA:3.40.50.300 1 204 2.5E-70 T 12-10-2018 M892_13725 189245577cbf72b2818ececb63925f3c 204 Pfam PF01121 Dephospho-CoA kinase 4 179 2.5E-73 T 12-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 M892_13725 189245577cbf72b2818ececb63925f3c 204 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 179 5.2E-68 T 12-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 M892_23625 2d4db0c17700dd43c621a3ec855fa00c 134 Pfam PF03479 Domain of unknown function (DUF296) 5 110 5.5E-23 T 12-10-2018 IPR005175 PPC domain M892_23625 2d4db0c17700dd43c621a3ec855fa00c 134 SUPERFAMILY SSF117856 3 131 1.31E-35 T 12-10-2018 M892_23625 2d4db0c17700dd43c621a3ec855fa00c 134 Gene3D G3DSA:3.30.1330.80 2 134 1.6E-46 T 12-10-2018 M892_17060 6056604d9b99d605703f06740b93a6c5 419 Pfam PF00375 Sodium:dicarboxylate symporter family 15 403 1.5E-118 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 M892_17060 6056604d9b99d605703f06740b93a6c5 419 Gene3D G3DSA:1.10.3860.10 2 419 2.0E-117 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 M892_17060 6056604d9b99d605703f06740b93a6c5 419 SUPERFAMILY SSF118215 15 403 1.16E-109 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 M892_17060 6056604d9b99d605703f06740b93a6c5 419 PRINTS PR00173 Glutamate-aspartate symporter signature 332 351 8.2E-53 T 12-10-2018 M892_17060 6056604d9b99d605703f06740b93a6c5 419 PRINTS PR00173 Glutamate-aspartate symporter signature 147 169 8.2E-53 T 12-10-2018 M892_17060 6056604d9b99d605703f06740b93a6c5 419 PRINTS PR00173 Glutamate-aspartate symporter signature 297 323 8.2E-53 T 12-10-2018 M892_17060 6056604d9b99d605703f06740b93a6c5 419 PRINTS PR00173 Glutamate-aspartate symporter signature 358 378 8.2E-53 T 12-10-2018 M892_17060 6056604d9b99d605703f06740b93a6c5 419 PRINTS PR00173 Glutamate-aspartate symporter signature 78 103 8.2E-53 T 12-10-2018 M892_17060 6056604d9b99d605703f06740b93a6c5 419 PRINTS PR00173 Glutamate-aspartate symporter signature 7 27 8.2E-53 T 12-10-2018 M892_17060 6056604d9b99d605703f06740b93a6c5 419 PRINTS PR00173 Glutamate-aspartate symporter signature 48 68 8.2E-53 T 12-10-2018 M892_17060 6056604d9b99d605703f06740b93a6c5 419 PRINTS PR00173 Glutamate-aspartate symporter signature 230 249 8.2E-53 T 12-10-2018 M892_17060 6056604d9b99d605703f06740b93a6c5 419 PRINTS PR00173 Glutamate-aspartate symporter signature 195 214 8.2E-53 T 12-10-2018 M892_01990 88d2d548135c1a239bd7a4571164d991 553 Pfam PF00037 4Fe-4S binding domain 446 466 2.0E-5 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M892_01990 88d2d548135c1a239bd7a4571164d991 553 Pfam PF00037 4Fe-4S binding domain 419 435 1.5E-4 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M892_01990 88d2d548135c1a239bd7a4571164d991 553 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 420 431 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M892_01990 88d2d548135c1a239bd7a4571164d991 553 Gene3D G3DSA:3.30.70.20 174 254 2.2E-12 T 12-10-2018 M892_01990 88d2d548135c1a239bd7a4571164d991 553 Gene3D G3DSA:3.30.70.20 413 482 2.1E-11 T 12-10-2018 M892_01990 88d2d548135c1a239bd7a4571164d991 553 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 451 462 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M892_01990 88d2d548135c1a239bd7a4571164d991 553 Pfam PF12838 4Fe-4S dicluster domain 185 231 1.2E-8 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M892_01990 88d2d548135c1a239bd7a4571164d991 553 SUPERFAMILY SSF54862 143 504 5.34E-41 T 12-10-2018 M892_12855 5ab76ca7e1a197bacef50f8a6141bfc8 451 Gene3D G3DSA:3.10.580.10 135 262 9.6E-38 T 12-10-2018 M892_12855 5ab76ca7e1a197bacef50f8a6141bfc8 451 Pfam PF01769 Divalent cation transporter 323 444 2.7E-23 T 12-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 M892_12855 5ab76ca7e1a197bacef50f8a6141bfc8 451 TIGRFAM TIGR00400 mgtE: magnesium transporter 20 451 2.9E-87 T 12-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 M892_12855 5ab76ca7e1a197bacef50f8a6141bfc8 451 SUPERFAMILY SSF54631 138 278 1.26E-27 T 12-10-2018 M892_12855 5ab76ca7e1a197bacef50f8a6141bfc8 451 SMART SM00924 36 139 4.3E-37 T 12-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain M892_12855 5ab76ca7e1a197bacef50f8a6141bfc8 451 Pfam PF03448 MgtE intracellular N domain 36 137 2.2E-26 T 12-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain M892_12855 5ab76ca7e1a197bacef50f8a6141bfc8 451 SMART SM00116 212 258 0.0014 T 12-10-2018 IPR000644 CBS domain M892_12855 5ab76ca7e1a197bacef50f8a6141bfc8 451 Pfam PF00571 CBS domain 140 195 7.1E-4 T 12-10-2018 IPR000644 CBS domain M892_12855 5ab76ca7e1a197bacef50f8a6141bfc8 451 Pfam PF00571 CBS domain 214 257 7.6E-5 T 12-10-2018 IPR000644 CBS domain M892_12855 5ab76ca7e1a197bacef50f8a6141bfc8 451 SUPERFAMILY SSF158791 12 136 1.83E-30 T 12-10-2018 M892_12855 5ab76ca7e1a197bacef50f8a6141bfc8 451 Gene3D G3DSA:1.10.357.20 277 451 4.9E-45 T 12-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain M892_12855 5ab76ca7e1a197bacef50f8a6141bfc8 451 Gene3D G3DSA:1.25.60.10 8 134 5.9E-20 T 12-10-2018 IPR038076 MgtE, N-terminal domain superfamily M892_12855 5ab76ca7e1a197bacef50f8a6141bfc8 451 SUPERFAMILY SSF161093 280 450 9.29E-44 T 12-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 M892_11205 7507a24b23649209a9e894a851a0d06b 111 Pfam PF01022 Bacterial regulatory protein, arsR family 12 57 3.1E-13 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M892_11205 7507a24b23649209a9e894a851a0d06b 111 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 29 47 - T 12-10-2018 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 M892_11205 7507a24b23649209a9e894a851a0d06b 111 SUPERFAMILY SSF46785 5 87 2.47E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_11205 7507a24b23649209a9e894a851a0d06b 111 Gene3D G3DSA:1.10.10.10 4 101 5.9E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_11205 7507a24b23649209a9e894a851a0d06b 111 SMART SM00418 5 83 1.3E-26 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M892_11205 7507a24b23649209a9e894a851a0d06b 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 27 38 9.9E-20 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M892_11205 7507a24b23649209a9e894a851a0d06b 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 9.9E-20 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M892_11205 7507a24b23649209a9e894a851a0d06b 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 7 22 9.9E-20 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M892_11205 7507a24b23649209a9e894a851a0d06b 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 55 9.9E-20 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M892_03035 ccacfe08a2e880888eb5849516acf28f 582 Pfam PF03534 Salmonella virulence plasmid 65kDa B protein 47 222 2.9E-17 T 12-10-2018 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 M892_03035 ccacfe08a2e880888eb5849516acf28f 582 SUPERFAMILY SSF69318 463 558 2.49E-6 T 12-10-2018 M892_19425 a7be676a2132af9b855906acd5fcae94 153 Gene3D G3DSA:3.30.420.470 8 149 4.1E-12 T 12-10-2018 M892_19425 a7be676a2132af9b855906acd5fcae94 153 Pfam PF13358 DDE superfamily endonuclease 2 118 4.8E-29 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_19425 a7be676a2132af9b855906acd5fcae94 153 SUPERFAMILY SSF53098 29 124 3.19E-8 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_09575 b599e7839223f9d627e9532763988061 78 Pfam PF00830 Ribosomal L28 family 3 62 2.6E-26 T 12-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_09575 b599e7839223f9d627e9532763988061 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.372 T 12-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_09575 b599e7839223f9d627e9532763988061 78 Gene3D G3DSA:2.30.170.40 2 78 4.9E-33 T 12-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_09575 b599e7839223f9d627e9532763988061 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 8.7E-28 T 12-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_09575 b599e7839223f9d627e9532763988061 78 SUPERFAMILY SSF143800 2 76 4.91E-30 T 12-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_12155 1530c43b16203729ef8a65462709f715 326 TIGRFAM TIGR01932 hflC: HflC protein 1 318 4.7E-135 T 12-10-2018 IPR010200 HflC GO:0016021|GO:0052547 M892_12155 1530c43b16203729ef8a65462709f715 326 SMART SM00244 18 218 6.7E-48 T 12-10-2018 IPR001107 Band 7 domain M892_12155 1530c43b16203729ef8a65462709f715 326 SUPERFAMILY SSF117892 56 223 3.27E-23 T 12-10-2018 IPR036013 Band 7/SPFH domain superfamily M892_12155 1530c43b16203729ef8a65462709f715 326 PIRSF PIRSF005651 1 326 7.4E-97 T 12-10-2018 IPR010200 HflC GO:0016021|GO:0052547 M892_12155 1530c43b16203729ef8a65462709f715 326 Pfam PF01145 SPFH domain / Band 7 family 22 243 1.5E-31 T 12-10-2018 IPR001107 Band 7 domain M892_04975 4a267afe2032bb3b3adbae89e4d739c8 395 ProSitePatterns PS00099 Thiolases active site. 376 389 - T 12-10-2018 IPR020610 Thiolase, active site GO:0016747 M892_04975 4a267afe2032bb3b3adbae89e4d739c8 395 SUPERFAMILY SSF53901 5 272 1.1E-84 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M892_04975 4a267afe2032bb3b3adbae89e4d739c8 395 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 8 393 2.4E-148 T 12-10-2018 IPR002155 Thiolase GO:0016747 M892_04975 4a267afe2032bb3b3adbae89e4d739c8 395 PIRSF PIRSF000429 1 395 3.3E-126 T 12-10-2018 IPR002155 Thiolase GO:0016747 M892_04975 4a267afe2032bb3b3adbae89e4d739c8 395 Pfam PF00108 Thiolase, N-terminal domain 6 264 2.7E-99 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 M892_04975 4a267afe2032bb3b3adbae89e4d739c8 395 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 12-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 M892_04975 4a267afe2032bb3b3adbae89e4d739c8 395 Gene3D G3DSA:3.40.47.10 128 391 5.0E-152 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M892_04975 4a267afe2032bb3b3adbae89e4d739c8 395 Pfam PF02803 Thiolase, C-terminal domain 273 393 1.9E-48 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 M892_04975 4a267afe2032bb3b3adbae89e4d739c8 395 ProSitePatterns PS00737 Thiolases signature 2. 341 357 - T 12-10-2018 IPR020613 Thiolase, conserved site GO:0016747 M892_04975 4a267afe2032bb3b3adbae89e4d739c8 395 SUPERFAMILY SSF53901 274 394 2.2E-41 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M892_04975 4a267afe2032bb3b3adbae89e4d739c8 395 Gene3D G3DSA:3.40.47.10 8 278 5.0E-152 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M892_08500 fbc0d76226d703df2d4ec1761023dcd1 355 Gene3D G3DSA:2.40.10.10 33 143 6.5E-33 T 12-10-2018 M892_08500 fbc0d76226d703df2d4ec1761023dcd1 355 Gene3D G3DSA:2.30.42.10 257 355 1.2E-23 T 12-10-2018 M892_08500 fbc0d76226d703df2d4ec1761023dcd1 355 PRINTS PR00834 HtrA/DegQ protease family signature 187 204 1.6E-46 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 M892_08500 fbc0d76226d703df2d4ec1761023dcd1 355 PRINTS PR00834 HtrA/DegQ protease family signature 209 226 1.6E-46 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 M892_08500 fbc0d76226d703df2d4ec1761023dcd1 355 PRINTS PR00834 HtrA/DegQ protease family signature 153 177 1.6E-46 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 M892_08500 fbc0d76226d703df2d4ec1761023dcd1 355 PRINTS PR00834 HtrA/DegQ protease family signature 92 104 1.6E-46 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 M892_08500 fbc0d76226d703df2d4ec1761023dcd1 355 PRINTS PR00834 HtrA/DegQ protease family signature 297 309 1.6E-46 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 M892_08500 fbc0d76226d703df2d4ec1761023dcd1 355 PRINTS PR00834 HtrA/DegQ protease family signature 113 133 1.6E-46 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 M892_08500 fbc0d76226d703df2d4ec1761023dcd1 355 Pfam PF13365 Trypsin-like peptidase domain 83 216 6.1E-33 T 12-10-2018 M892_08500 fbc0d76226d703df2d4ec1761023dcd1 355 TIGRFAM TIGR02038 protease_degS: periplasmic serine peptidase DegS 2 351 6.4E-164 T 12-10-2018 IPR011783 Peptidase S1C, DegS GO:0004252|GO:0006508 M892_08500 fbc0d76226d703df2d4ec1761023dcd1 355 SUPERFAMILY SSF50156 240 347 8.05E-21 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 M892_08500 fbc0d76226d703df2d4ec1761023dcd1 355 SUPERFAMILY SSF50494 44 266 5.47E-62 T 12-10-2018 IPR009003 Peptidase S1, PA clan M892_08500 fbc0d76226d703df2d4ec1761023dcd1 355 Pfam PF13180 PDZ domain 258 347 5.5E-14 T 12-10-2018 IPR001478 PDZ domain GO:0005515 M892_08500 fbc0d76226d703df2d4ec1761023dcd1 355 Gene3D G3DSA:2.40.10.10 145 256 1.8E-35 T 12-10-2018 M892_08500 fbc0d76226d703df2d4ec1761023dcd1 355 SMART SM00228 257 339 1.9E-7 T 12-10-2018 IPR001478 PDZ domain GO:0005515 M892_05310 46906f9d251abdcaf900d6bf112828fd 741 SUPERFAMILY SSF53659 5 740 0.0 T 12-10-2018 M892_05310 46906f9d251abdcaf900d6bf112828fd 741 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 1 740 0.0 T 12-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 M892_05310 46906f9d251abdcaf900d6bf112828fd 741 Pfam PF03971 Monomeric isocitrate dehydrogenase 7 740 0.0 T 12-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 M892_05310 46906f9d251abdcaf900d6bf112828fd 741 PIRSF PIRSF009407 1 741 0.0 T 12-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 M892_05310 46906f9d251abdcaf900d6bf112828fd 741 Gene3D G3DSA:3.40.718.10 414 654 3.3E-9 T 12-10-2018 M892_21320 473e8e23488affadb32524a200ee2c17 82 Pfam PF10688 Bacterial inner membrane protein 4 73 2.7E-9 T 12-10-2018 IPR019629 Uncharacterised protein family HI1736/YgjV M892_21320 473e8e23488affadb32524a200ee2c17 82 Gene3D G3DSA:1.20.1280.290 27 82 2.7E-6 T 12-10-2018 M892_21320 473e8e23488affadb32524a200ee2c17 82 ProDom PD058023 TRANSMEMBRANE SO1069 MEMBRANE VCA0743 SO4196 VVA0623 VPA0666 HI1736 PM0424 3 73 4.0E-33 T 12-10-2018 IPR020137 Uncharacterised protein family HI1736 M892_14120 1a3b337262c2d944b36a042a9bf3bb94 314 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 180 247 3.0E-24 T 12-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 M892_14120 1a3b337262c2d944b36a042a9bf3bb94 314 Gene3D G3DSA:3.30.2350.10 1 248 1.8E-95 T 12-10-2018 M892_14120 1a3b337262c2d944b36a042a9bf3bb94 314 SUPERFAMILY SSF88697 250 310 9.44E-12 T 12-10-2018 IPR015947 PUA-like superfamily M892_14120 1a3b337262c2d944b36a042a9bf3bb94 314 SUPERFAMILY SSF55120 9 247 1.09E-83 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 M892_14120 1a3b337262c2d944b36a042a9bf3bb94 314 Gene3D G3DSA:2.30.130.10 249 311 9.0E-22 T 12-10-2018 IPR036974 PUA domain superfamily GO:0003723 M892_14120 1a3b337262c2d944b36a042a9bf3bb94 314 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 10 218 4.2E-87 T 12-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 M892_14120 1a3b337262c2d944b36a042a9bf3bb94 314 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 251 308 2.2E-15 T 12-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 M892_14120 1a3b337262c2d944b36a042a9bf3bb94 314 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 32 179 7.9E-57 T 12-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 M892_14120 1a3b337262c2d944b36a042a9bf3bb94 314 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 10 308 19.085 T 12-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 M892_21310 0501b0eeeb338be5cadaf32890ac01b9 251 SMART SM00382 26 213 3.9E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_21310 0501b0eeeb338be5cadaf32890ac01b9 251 SUPERFAMILY SSF52540 2 228 3.51E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_21310 0501b0eeeb338be5cadaf32890ac01b9 251 Gene3D G3DSA:3.40.50.300 1 249 1.0E-59 T 12-10-2018 M892_21310 0501b0eeeb338be5cadaf32890ac01b9 251 Pfam PF00005 ABC transporter 21 164 2.9E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_21310 0501b0eeeb338be5cadaf32890ac01b9 251 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_10690 321d9ffdfc92a17ec35cfa5f40509ab8 548 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 412 431 - T 12-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 M892_10690 321d9ffdfc92a17ec35cfa5f40509ab8 548 SUPERFAMILY SSF52467 181 341 7.44E-55 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily M892_10690 321d9ffdfc92a17ec35cfa5f40509ab8 548 Gene3D G3DSA:3.40.50.970 350 548 1.8E-66 T 12-10-2018 M892_10690 321d9ffdfc92a17ec35cfa5f40509ab8 548 SUPERFAMILY SSF52518 1 178 1.85E-61 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold M892_10690 321d9ffdfc92a17ec35cfa5f40509ab8 548 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 375 523 1.2E-48 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 M892_10690 321d9ffdfc92a17ec35cfa5f40509ab8 548 Gene3D G3DSA:3.40.50.1220 180 349 2.6E-51 T 12-10-2018 M892_10690 321d9ffdfc92a17ec35cfa5f40509ab8 548 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 167 7.1E-55 T 12-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 M892_10690 321d9ffdfc92a17ec35cfa5f40509ab8 548 SUPERFAMILY SSF52518 358 545 1.02E-65 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold M892_10690 321d9ffdfc92a17ec35cfa5f40509ab8 548 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 1 546 7.8E-210 T 12-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 M892_10690 321d9ffdfc92a17ec35cfa5f40509ab8 548 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 187 322 2.3E-39 T 12-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 M892_10690 321d9ffdfc92a17ec35cfa5f40509ab8 548 Gene3D G3DSA:3.40.50.970 1 174 3.3E-66 T 12-10-2018 M892_04775 5cb2d0ff8a7dbed5c8abe9d9b57a4e3f 1559 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1216 1284 1.0E-15 T 12-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 M892_04775 5cb2d0ff8a7dbed5c8abe9d9b57a4e3f 1559 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 700 722 0.0017 T 12-10-2018 IPR006530 YD repeat M892_00480 43da3460d38ab625e7ba4494c4ee022f 384 Pfam PF02371 Transposase IS116/IS110/IS902 family 227 301 3.2E-20 T 12-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 M892_00480 43da3460d38ab625e7ba4494c4ee022f 384 Pfam PF01548 Transposase 9 157 1.1E-12 T 12-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 M892_18640 43da3460d38ab625e7ba4494c4ee022f 384 Pfam PF02371 Transposase IS116/IS110/IS902 family 227 301 3.2E-20 T 12-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 M892_18640 43da3460d38ab625e7ba4494c4ee022f 384 Pfam PF01548 Transposase 9 157 1.1E-12 T 12-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 M892_04240 382a2b9574871a2a8e5207ccef83b399 785 Gene3D G3DSA:1.10.1740.190 274 421 2.9E-35 T 12-10-2018 M892_04240 382a2b9574871a2a8e5207ccef83b399 785 Gene3D G3DSA:2.60.120.380 560 664 2.6E-13 T 12-10-2018 M892_04240 382a2b9574871a2a8e5207ccef83b399 785 Gene3D G3DSA:2.60.120.380 684 784 1.1E-7 T 12-10-2018 M892_04240 382a2b9574871a2a8e5207ccef83b399 785 Pfam PF01752 Collagenase 245 529 3.0E-110 T 12-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 M892_04240 382a2b9574871a2a8e5207ccef83b399 785 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 429 444 2.9E-31 T 12-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 M892_04240 382a2b9574871a2a8e5207ccef83b399 785 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 70 88 2.9E-31 T 12-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 M892_04240 382a2b9574871a2a8e5207ccef83b399 785 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 405 423 2.9E-31 T 12-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 M892_04240 382a2b9574871a2a8e5207ccef83b399 785 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 345 359 2.9E-31 T 12-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 M892_04240 382a2b9574871a2a8e5207ccef83b399 785 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 363 379 2.9E-31 T 12-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 M892_04240 382a2b9574871a2a8e5207ccef83b399 785 Pfam PF08453 Peptidase family M9 N-terminal 10 183 1.4E-47 T 12-10-2018 IPR013661 Peptidase M9, collagenase, N-terminal domain M892_23430 75a49201d25049c16173f7ca40ec3e6b 366 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 340 4.1E-99 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 M892_23430 75a49201d25049c16173f7ca40ec3e6b 366 SUPERFAMILY SSF51395 3 364 1.86E-126 T 12-10-2018 M892_23430 75a49201d25049c16173f7ca40ec3e6b 366 Gene3D G3DSA:3.20.20.70 1 365 1.8E-143 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M892_14475 a53abc6039da20235add0068932bcda9 469 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 369 452 4.5E-20 T 12-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 M892_14475 a53abc6039da20235add0068932bcda9 469 Gene3D G3DSA:3.30.1360.60 389 469 4.6E-27 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 M892_14475 a53abc6039da20235add0068932bcda9 469 Pfam PF00367 phosphotransferase system, EIIB 396 428 6.0E-11 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 M892_14475 a53abc6039da20235add0068932bcda9 469 SUPERFAMILY SSF55604 393 467 4.58E-20 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 M892_14475 a53abc6039da20235add0068932bcda9 469 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 467 3.6E-182 T 12-10-2018 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0016021|GO:1904659 M892_14475 a53abc6039da20235add0068932bcda9 469 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 406 423 - T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 M892_14475 a53abc6039da20235add0068932bcda9 469 Pfam PF02378 Phosphotransferase system, EIIC 13 311 1.3E-74 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 M892_25755 3b709447df98831624247eb74f1d25d1 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 676 695 1.2E-6 T 12-10-2018 M892_25755 3b709447df98831624247eb74f1d25d1 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 646 665 1.2E-6 T 12-10-2018 M892_25755 3b709447df98831624247eb74f1d25d1 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 706 724 1.2E-6 T 12-10-2018 M892_25755 3b709447df98831624247eb74f1d25d1 786 Pfam PF13654 AAA domain 25 539 6.8E-185 T 12-10-2018 M892_25755 3b709447df98831624247eb74f1d25d1 786 SUPERFAMILY SSF54211 564 756 5.31E-36 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold M892_25755 3b709447df98831624247eb74f1d25d1 786 SUPERFAMILY SSF52540 30 543 9.74E-12 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_25755 3b709447df98831624247eb74f1d25d1 786 Gene3D G3DSA:3.40.50.300 243 449 3.7E-56 T 12-10-2018 M892_25755 3b709447df98831624247eb74f1d25d1 786 Gene3D G3DSA:3.40.50.300 5 179 1.3E-27 T 12-10-2018 M892_25755 3b709447df98831624247eb74f1d25d1 786 Gene3D G3DSA:3.30.230.10 541 769 5.6E-91 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M892_25755 3b709447df98831624247eb74f1d25d1 786 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 649 750 4.4E-9 T 12-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 M892_25755 3b709447df98831624247eb74f1d25d1 786 Gene3D G3DSA:1.10.8.60 450 536 1.2E-12 T 12-10-2018 M892_12480 de399a5d59b67d610c9fc43d8fca75a3 583 Gene3D G3DSA:2.60.40.3470 27 140 3.2E-14 T 12-10-2018 M892_12480 de399a5d59b67d610c9fc43d8fca75a3 583 SMART SM00965 183 231 2.2E-9 T 12-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 M892_12480 de399a5d59b67d610c9fc43d8fca75a3 583 Gene3D G3DSA:3.55.50.30 141 254 3.6E-36 T 12-10-2018 M892_12480 de399a5d59b67d610c9fc43d8fca75a3 583 PRINTS PR00811 Bacterial general secretion pathway protein D signature 419 443 7.9E-20 T 12-10-2018 IPR001775 GspD/PilQ family M892_12480 de399a5d59b67d610c9fc43d8fca75a3 583 PRINTS PR00811 Bacterial general secretion pathway protein D signature 569 583 7.9E-20 T 12-10-2018 IPR001775 GspD/PilQ family M892_12480 de399a5d59b67d610c9fc43d8fca75a3 583 PRINTS PR00811 Bacterial general secretion pathway protein D signature 454 464 7.9E-20 T 12-10-2018 IPR001775 GspD/PilQ family M892_12480 de399a5d59b67d610c9fc43d8fca75a3 583 PRINTS PR00811 Bacterial general secretion pathway protein D signature 546 564 7.9E-20 T 12-10-2018 IPR001775 GspD/PilQ family M892_12480 de399a5d59b67d610c9fc43d8fca75a3 583 PRINTS PR00811 Bacterial general secretion pathway protein D signature 322 332 7.9E-20 T 12-10-2018 IPR001775 GspD/PilQ family M892_12480 de399a5d59b67d610c9fc43d8fca75a3 583 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 527 560 - T 12-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 M892_12480 de399a5d59b67d610c9fc43d8fca75a3 583 Gene3D G3DSA:3.30.1370.120 255 318 9.3E-12 T 12-10-2018 IPR038591 NolW-like superfamily M892_12480 de399a5d59b67d610c9fc43d8fca75a3 583 Pfam PF00263 Bacterial type II and III secretion system protein 423 581 3.6E-46 T 12-10-2018 IPR004846 Type II/III secretion system GO:0009306 M892_12480 de399a5d59b67d610c9fc43d8fca75a3 583 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 158 581 9.8E-164 T 12-10-2018 IPR013355 Type IV pilus secretin PilQ M892_12480 de399a5d59b67d610c9fc43d8fca75a3 583 Pfam PF03958 Bacterial type II/III secretion system short domain 257 322 8.3E-13 T 12-10-2018 IPR005644 NolW-like M892_01630 c2aafde499db35d4eeeacb659712a28e 501 SUPERFAMILY SSF53335 29 331 1.23E-62 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M892_01630 c2aafde499db35d4eeeacb659712a28e 501 TIGRFAM TIGR00446 nop2p: NOL1/NOP2/sun family putative RNA methylase 63 331 8.6E-102 T 12-10-2018 IPR011023 Nop2p GO:0003723|GO:0006364|GO:0008757 Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 M892_01630 c2aafde499db35d4eeeacb659712a28e 501 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 210 222 1.6E-27 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase M892_01630 c2aafde499db35d4eeeacb659712a28e 501 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 314 331 1.6E-27 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase M892_01630 c2aafde499db35d4eeeacb659712a28e 501 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 260 276 1.6E-27 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase M892_01630 c2aafde499db35d4eeeacb659712a28e 501 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 112 126 1.6E-27 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase M892_01630 c2aafde499db35d4eeeacb659712a28e 501 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 143 153 1.6E-27 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase M892_01630 c2aafde499db35d4eeeacb659712a28e 501 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 209 220 - T 12-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 M892_01630 c2aafde499db35d4eeeacb659712a28e 501 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 30 126 1.9E-29 T 12-10-2018 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 M892_01630 c2aafde499db35d4eeeacb659712a28e 501 Hamap MF_01579 Ribosomal RNA small subunit methyltransferase F [rsmF]. 28 501 66.209 T 12-10-2018 IPR023545 rRNA small subunit methyltransferase F GO:0008649 M892_01630 c2aafde499db35d4eeeacb659712a28e 501 Gene3D G3DSA:2.30.130.90 332 501 1.9E-66 T 12-10-2018 M892_01630 c2aafde499db35d4eeeacb659712a28e 501 Pfam PF13636 RNA-binding PUA-like domain of methyltransferase RsmF 455 496 4.4E-9 T 12-10-2018 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain M892_01630 c2aafde499db35d4eeeacb659712a28e 501 Pfam PF01189 16S rRNA methyltransferase RsmB/F 134 329 6.8E-49 T 12-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 M892_01630 c2aafde499db35d4eeeacb659712a28e 501 Gene3D G3DSA:3.40.50.150 25 331 8.9E-99 T 12-10-2018 M892_08455 fabbb6ffde223580e2fd0bdc86608e6a 211 Pfam PF00043 Glutathione S-transferase, C-terminal domain 117 194 1.4E-8 T 12-10-2018 IPR004046 Glutathione S-transferase, C-terminal M892_08455 fabbb6ffde223580e2fd0bdc86608e6a 211 SUPERFAMILY SSF52833 11 110 1.47E-21 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M892_08455 fabbb6ffde223580e2fd0bdc86608e6a 211 Gene3D G3DSA:1.20.1050.10 89 193 2.5E-78 T 12-10-2018 M892_08455 fabbb6ffde223580e2fd0bdc86608e6a 211 Pfam PF13417 Glutathione S-transferase, N-terminal domain 13 87 1.4E-16 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 M892_08455 fabbb6ffde223580e2fd0bdc86608e6a 211 Gene3D G3DSA:3.40.30.10 11 202 2.5E-78 T 12-10-2018 M892_08455 fabbb6ffde223580e2fd0bdc86608e6a 211 SUPERFAMILY SSF47616 82 208 3.13E-23 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily M892_25190 39d7136d3f593b8903ef73c85cd88b77 305 SUPERFAMILY SSF103481 187 287 4.05E-11 T 12-10-2018 M892_25190 39d7136d3f593b8903ef73c85cd88b77 305 SUPERFAMILY SSF103481 35 138 3.14E-11 T 12-10-2018 M892_25190 39d7136d3f593b8903ef73c85cd88b77 305 Pfam PF00892 EamA-like transporter family 151 280 8.9E-19 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M892_25190 39d7136d3f593b8903ef73c85cd88b77 305 Pfam PF00892 EamA-like transporter family 3 135 4.2E-19 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M892_21225 3f153f4ce5144c04544f8942f7ccbdc0 385 Pfam PF01609 Transposase DDE domain 130 292 9.4E-16 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_21225 3f153f4ce5144c04544f8942f7ccbdc0 385 SUPERFAMILY SSF53098 8 372 5.16E-54 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_04870 ed1c144c477d0437728265fa4878c85a 894 Pfam PF16967 E-set like domain 238 295 2.9E-10 T 12-10-2018 IPR032636 Pilus assembly protein, E-set like domain M892_00030 002656357078988e294e55f5b886bade 456 Pfam PF07730 Histidine kinase 250 315 2.0E-13 T 12-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 M892_00030 002656357078988e294e55f5b886bade 456 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 356 446 2.3E-8 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_00030 002656357078988e294e55f5b886bade 456 SMART SM01049 42 133 2.5E-31 T 12-10-2018 IPR033480 Single Cache domain 2 M892_00030 002656357078988e294e55f5b886bade 456 SUPERFAMILY SSF55874 322 443 3.14E-19 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_00030 002656357078988e294e55f5b886bade 456 SMART SM00387 353 447 3.1E-7 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_00030 002656357078988e294e55f5b886bade 456 Gene3D G3DSA:3.30.450.20 28 203 1.2E-46 T 12-10-2018 M892_00030 002656357078988e294e55f5b886bade 456 PIRSF PIRSF037314 1 456 7.6E-187 T 12-10-2018 IPR017171 Signal transduction histidine kinase, MctS M892_00030 002656357078988e294e55f5b886bade 456 Pfam PF17200 Single Cache domain 2 45 192 3.8E-41 T 12-10-2018 IPR033480 Single Cache domain 2 M892_00030 002656357078988e294e55f5b886bade 456 Gene3D G3DSA:3.30.565.10 313 447 2.5E-30 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_08260 f9f54fb6899d7ea5d0305d6a2d9aa9fc 1516 SUPERFAMILY SSF51395 452 1221 1.51E-267 T 12-10-2018 M892_08260 f9f54fb6899d7ea5d0305d6a2d9aa9fc 1516 Gene3D G3DSA:3.20.20.70 498 1204 0.0 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M892_08260 f9f54fb6899d7ea5d0305d6a2d9aa9fc 1516 Gene3D G3DSA:3.20.20.70 448 815 0.0 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M892_08260 f9f54fb6899d7ea5d0305d6a2d9aa9fc 1516 SUPERFAMILY SSF69336 1235 1498 2.75E-95 T 12-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 M892_08260 f9f54fb6899d7ea5d0305d6a2d9aa9fc 1516 Pfam PF01493 GXGXG motif 1267 1452 1.2E-83 T 12-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 M892_08260 f9f54fb6899d7ea5d0305d6a2d9aa9fc 1516 Gene3D G3DSA:2.160.20.60 1239 1510 3.4E-109 T 12-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 M892_08260 f9f54fb6899d7ea5d0305d6a2d9aa9fc 1516 Gene3D G3DSA:3.60.20.10 21 560 0.0 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal M892_08260 f9f54fb6899d7ea5d0305d6a2d9aa9fc 1516 Pfam PF01645 Conserved region in glutamate synthase 817 1187 2.0E-150 T 12-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 M892_08260 f9f54fb6899d7ea5d0305d6a2d9aa9fc 1516 Pfam PF04898 Glutamate synthase central domain 472 756 4.9E-117 T 12-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 M892_08260 f9f54fb6899d7ea5d0305d6a2d9aa9fc 1516 SUPERFAMILY SSF56235 21 447 7.72E-153 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal M892_08260 f9f54fb6899d7ea5d0305d6a2d9aa9fc 1516 Pfam PF00310 Glutamine amidotransferases class-II 21 443 4.7E-185 T 12-10-2018 IPR017932 Glutamine amidotransferase type 2 domain M892_24695 6b9dc6d999f0760736120007532efe74 440 Pfam PF00512 His Kinase A (phospho-acceptor) domain 230 283 9.7E-8 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M892_24695 6b9dc6d999f0760736120007532efe74 440 SMART SM00304 168 221 6.2E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M892_24695 6b9dc6d999f0760736120007532efe74 440 Gene3D G3DSA:1.10.287.130 172 287 1.1E-18 T 12-10-2018 M892_24695 6b9dc6d999f0760736120007532efe74 440 SMART SM00387 330 440 5.0E-23 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_24695 6b9dc6d999f0760736120007532efe74 440 SUPERFAMILY SSF47384 205 286 2.75E-10 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M892_24695 6b9dc6d999f0760736120007532efe74 440 Gene3D G3DSA:3.30.565.10 305 440 3.2E-24 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_24695 6b9dc6d999f0760736120007532efe74 440 SMART SM00388 222 286 1.7E-4 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M892_24695 6b9dc6d999f0760736120007532efe74 440 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 338 438 1.1E-13 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_24695 6b9dc6d999f0760736120007532efe74 440 SUPERFAMILY SSF55874 304 438 6.29E-26 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_24695 6b9dc6d999f0760736120007532efe74 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 437 9.5E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_24695 6b9dc6d999f0760736120007532efe74 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 383 393 9.5E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_24695 6b9dc6d999f0760736120007532efe74 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 418 9.5E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_24695 6b9dc6d999f0760736120007532efe74 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 365 379 9.5E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_24205 78b172221eff400166750fd99a78b696 539 SMART SM00267 365 538 1.0E-55 T 12-10-2018 IPR000160 GGDEF domain M892_24205 78b172221eff400166750fd99a78b696 539 Pfam PF02743 Cache domain 44 323 7.8E-15 T 12-10-2018 IPR033479 Double Cache domain 1 M892_24205 78b172221eff400166750fd99a78b696 539 Pfam PF00990 Diguanylate cyclase, GGDEF domain 376 534 5.6E-44 T 12-10-2018 IPR000160 GGDEF domain M892_24205 78b172221eff400166750fd99a78b696 539 SUPERFAMILY SSF103190 225 328 5.1E-11 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily M892_24205 78b172221eff400166750fd99a78b696 539 Gene3D G3DSA:3.30.70.270 370 538 3.3E-51 T 12-10-2018 M892_24205 78b172221eff400166750fd99a78b696 539 Gene3D G3DSA:3.30.450.20 224 306 6.4E-7 T 12-10-2018 M892_24205 78b172221eff400166750fd99a78b696 539 Gene3D G3DSA:3.30.450.20 90 221 1.0E-46 T 12-10-2018 M892_24205 78b172221eff400166750fd99a78b696 539 SUPERFAMILY SSF103190 45 219 2.07E-49 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily M892_24205 78b172221eff400166750fd99a78b696 539 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 375 537 1.1E-40 T 12-10-2018 IPR000160 GGDEF domain M892_24205 78b172221eff400166750fd99a78b696 539 SUPERFAMILY SSF55073 381 537 1.65E-44 T 12-10-2018 IPR029787 Nucleotide cyclase M892_07435 25241e8184943ecdf3a3e2cf6254bfe4 133 Pfam PF01609 Transposase DDE domain 2 117 1.7E-11 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_11995 c032600424114b5c5e43e6d21d4f7c9d 154 Pfam PF02556 Preprotein translocase subunit SecB 7 146 1.2E-54 T 12-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 M892_11995 c032600424114b5c5e43e6d21d4f7c9d 154 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 99 121 1.8E-38 T 12-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 M892_11995 c032600424114b5c5e43e6d21d4f7c9d 154 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 125 143 1.8E-38 T 12-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 M892_11995 c032600424114b5c5e43e6d21d4f7c9d 154 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 15 32 1.8E-38 T 12-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 M892_11995 c032600424114b5c5e43e6d21d4f7c9d 154 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 75 95 1.8E-38 T 12-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 M892_11995 c032600424114b5c5e43e6d21d4f7c9d 154 Gene3D G3DSA:3.10.420.10 4 154 1.6E-57 T 12-10-2018 IPR035958 SecB-like superfamily M892_11995 c032600424114b5c5e43e6d21d4f7c9d 154 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 8 146 1.7E-58 T 12-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 M892_11995 c032600424114b5c5e43e6d21d4f7c9d 154 SUPERFAMILY SSF54611 4 143 2.62E-51 T 12-10-2018 IPR035958 SecB-like superfamily M892_11995 c032600424114b5c5e43e6d21d4f7c9d 154 Hamap MF_00821 Protein-export protein SecB [secB]. 1 147 31.901 T 12-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 M892_09615 5216a54bb2fc4be19ea5d1c221a053f5 317 SUPERFAMILY SSF103481 40 141 5.23E-13 T 12-10-2018 M892_09615 5216a54bb2fc4be19ea5d1c221a053f5 317 Pfam PF00892 EamA-like transporter family 6 139 7.7E-25 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M892_09615 5216a54bb2fc4be19ea5d1c221a053f5 317 Pfam PF00892 EamA-like transporter family 154 286 1.4E-13 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M892_10480 ba9c04bc8e14083c9253d9d12b20ff3e 82 SUPERFAMILY SSF64307 9 80 8.11E-25 T 12-10-2018 IPR036868 TusA-like domain superfamily M892_10480 ba9c04bc8e14083c9253d9d12b20ff3e 82 Gene3D G3DSA:3.30.110.40 5 80 9.3E-29 T 12-10-2018 IPR036868 TusA-like domain superfamily M892_10480 ba9c04bc8e14083c9253d9d12b20ff3e 82 Pfam PF01206 Sulfurtransferase TusA 10 79 1.5E-22 T 12-10-2018 IPR001455 TusA-like domain M892_10480 ba9c04bc8e14083c9253d9d12b20ff3e 82 Hamap MF_00413 Sulfur carrier protein TusA [tusA]. 3 81 28.866 T 12-10-2018 IPR022931 Sulfur carrier protein TusA GO:0002143|GO:0097163 M892_10480 ba9c04bc8e14083c9253d9d12b20ff3e 82 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 12 36 - T 12-10-2018 IPR001455 TusA-like domain M892_07080 d5fbc6126a1bed70c3b08a5654eb7828 621 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 10 620 45.829 T 12-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 M892_07080 d5fbc6126a1bed70c3b08a5654eb7828 621 SUPERFAMILY SSF52518 9 381 2.79E-75 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold M892_07080 d5fbc6126a1bed70c3b08a5654eb7828 621 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 12 619 9.5E-302 T 12-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 M892_07080 d5fbc6126a1bed70c3b08a5654eb7828 621 Gene3D G3DSA:3.40.50.920 495 621 6.6E-45 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 M892_07080 d5fbc6126a1bed70c3b08a5654eb7828 621 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 12-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 M892_07080 d5fbc6126a1bed70c3b08a5654eb7828 621 Gene3D G3DSA:3.40.50.970 318 488 1.7E-64 T 12-10-2018 M892_07080 d5fbc6126a1bed70c3b08a5654eb7828 621 Pfam PF02780 Transketolase, C-terminal domain 495 611 6.5E-29 T 12-10-2018 IPR033248 Transketolase, C-terminal domain M892_07080 d5fbc6126a1bed70c3b08a5654eb7828 621 SMART SM00861 319 483 1.4E-62 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain M892_07080 d5fbc6126a1bed70c3b08a5654eb7828 621 Pfam PF02779 Transketolase, pyrimidine binding domain 319 478 1.3E-36 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain M892_07080 d5fbc6126a1bed70c3b08a5654eb7828 621 ProSitePatterns PS00801 Transketolase signature 1. 36 55 - T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 M892_07080 d5fbc6126a1bed70c3b08a5654eb7828 621 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 14 282 1.9E-119 T 12-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 M892_07080 d5fbc6126a1bed70c3b08a5654eb7828 621 SUPERFAMILY SSF52518 317 504 5.01E-57 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold M892_07080 d5fbc6126a1bed70c3b08a5654eb7828 621 SUPERFAMILY SSF52922 492 619 1.14E-33 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 M892_14905 9d675eb512c17bed5bd01e3e93904c16 185 Gene3D G3DSA:1.10.132.20 101 185 2.7E-29 T 12-10-2018 M892_14905 9d675eb512c17bed5bd01e3e93904c16 185 Gene3D G3DSA:3.30.1360.40 35 100 5.0E-31 T 12-10-2018 M892_14905 9d675eb512c17bed5bd01e3e93904c16 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.775 T 12-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 M892_14905 9d675eb512c17bed5bd01e3e93904c16 185 SUPERFAMILY SSF55194 2 184 4.06E-72 T 12-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 M892_14905 9d675eb512c17bed5bd01e3e93904c16 185 Gene3D G3DSA:1.10.132.20 1 34 5.0E-10 T 12-10-2018 M892_14905 9d675eb512c17bed5bd01e3e93904c16 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 1.6E-76 T 12-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 M892_14905 9d675eb512c17bed5bd01e3e93904c16 185 Pfam PF01765 Ribosome recycling factor 20 183 3.0E-63 T 12-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 M892_23295 c76952600c73786cbc9429bcf3ce8a45 334 Pfam PF01212 Beta-eliminating lyase 2 283 1.9E-100 T 12-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 M892_23295 c76952600c73786cbc9429bcf3ce8a45 334 Gene3D G3DSA:3.40.640.10 1 243 9.9E-97 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M892_23295 c76952600c73786cbc9429bcf3ce8a45 334 SUPERFAMILY SSF53383 1 332 1.48E-117 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M892_23295 c76952600c73786cbc9429bcf3ce8a45 334 Gene3D G3DSA:3.90.1150.10 244 334 7.8E-25 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M892_23295 c76952600c73786cbc9429bcf3ce8a45 334 PIRSF PIRSF017617 1 334 2.2E-134 T 12-10-2018 IPR023603 Threonine aldolase M892_13850 698076fb9342cbbf5df9f6864febf907 462 Gene3D G3DSA:1.10.3090.10 182 432 3.5E-93 T 12-10-2018 M892_13850 698076fb9342cbbf5df9f6864febf907 462 Pfam PF01743 Poly A polymerase head domain 54 184 2.5E-39 T 12-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 M892_13850 698076fb9342cbbf5df9f6864febf907 462 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 211 272 1.8E-22 T 12-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 M892_13850 698076fb9342cbbf5df9f6864febf907 462 Gene3D G3DSA:3.30.460.10 20 180 8.5E-64 T 12-10-2018 M892_13850 698076fb9342cbbf5df9f6864febf907 462 Pfam PF12626 Polymerase A arginine-rich C-terminus 330 447 4.0E-37 T 12-10-2018 IPR025866 Polymerase A arginine-rich C-terminal domain M892_13850 698076fb9342cbbf5df9f6864febf907 462 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 23 455 6.2E-163 T 12-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 M892_13850 698076fb9342cbbf5df9f6864febf907 462 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 10 454 37.613 T 12-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 M892_13850 698076fb9342cbbf5df9f6864febf907 462 SUPERFAMILY SSF81301 26 181 3.49E-40 T 12-10-2018 M892_13850 698076fb9342cbbf5df9f6864febf907 462 SUPERFAMILY SSF81891 182 419 5.62E-49 T 12-10-2018 M892_27275 bebe51a54f88e0e52f3dcbf6bb6b8232 255 SUPERFAMILY SSF46689 62 119 3.58E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_27275 bebe51a54f88e0e52f3dcbf6bb6b8232 255 Pfam PF06445 GyrI-like small molecule binding domain 133 235 2.6E-10 T 12-10-2018 IPR029442 GyrI-like small molecule binding domain M892_27275 bebe51a54f88e0e52f3dcbf6bb6b8232 255 SMART SM00342 25 109 3.9E-20 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M892_27275 bebe51a54f88e0e52f3dcbf6bb6b8232 255 SUPERFAMILY SSF46689 8 58 3.32E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_27275 bebe51a54f88e0e52f3dcbf6bb6b8232 255 Gene3D G3DSA:1.10.10.60 62 124 6.5E-13 T 12-10-2018 M892_27275 bebe51a54f88e0e52f3dcbf6bb6b8232 255 Gene3D G3DSA:3.20.80.10 133 244 2.9E-15 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily M892_27275 bebe51a54f88e0e52f3dcbf6bb6b8232 255 Gene3D G3DSA:1.10.10.60 2 61 1.9E-17 T 12-10-2018 M892_27275 bebe51a54f88e0e52f3dcbf6bb6b8232 255 SUPERFAMILY SSF55136 133 235 1.26E-12 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily M892_27275 bebe51a54f88e0e52f3dcbf6bb6b8232 255 Pfam PF12833 Helix-turn-helix domain 33 111 4.8E-19 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M892_02650 a04d28c6d982d2c883a61139f91b0391 342 Gene3D G3DSA:3.40.630.10 1 342 1.0E-121 T 12-10-2018 M892_02650 a04d28c6d982d2c883a61139f91b0391 342 PIRSF PIRSF017020 4 336 9.4E-127 T 12-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 M892_02650 a04d28c6d982d2c883a61139f91b0391 342 SUPERFAMILY SSF53187 9 329 9.24E-76 T 12-10-2018 M892_02650 a04d28c6d982d2c883a61139f91b0391 342 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 53 330 6.4E-70 T 12-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 M892_02650 a04d28c6d982d2c883a61139f91b0391 342 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 342 135.1 T 12-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 M892_09200 4ca440efbe14af193e53dc561e300836 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 12-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_09200 4ca440efbe14af193e53dc561e300836 92 PIRSF PIRSF002144 1 92 2.0E-31 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_09200 4ca440efbe14af193e53dc561e300836 92 Pfam PF00203 Ribosomal protein S19 3 83 2.7E-36 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_09200 4ca440efbe14af193e53dc561e300836 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 7.3E-25 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_09200 4ca440efbe14af193e53dc561e300836 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 7.3E-25 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_09200 4ca440efbe14af193e53dc561e300836 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 7.3E-25 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_09200 4ca440efbe14af193e53dc561e300836 92 SUPERFAMILY SSF54570 3 84 2.49E-35 T 12-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_09200 4ca440efbe14af193e53dc561e300836 92 Gene3D G3DSA:3.30.860.10 1 92 1.0E-43 T 12-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_09200 4ca440efbe14af193e53dc561e300836 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.68 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_09200 4ca440efbe14af193e53dc561e300836 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 2.3E-46 T 12-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 M892_14380 9fdf3c91aba2a7d62f6c97f66747ff16 502 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 21 62 6.7E-7 T 12-10-2018 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal M892_14380 9fdf3c91aba2a7d62f6c97f66747ff16 502 SUPERFAMILY SSF53300 155 416 2.97E-9 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily M892_02840 1560e7533fc142bd317522926d93d2a0 269 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 13 66 8.2E-8 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 M892_02840 1560e7533fc142bd317522926d93d2a0 269 Gene3D G3DSA:1.10.260.40 2 70 6.2E-6 T 12-10-2018 M892_02840 1560e7533fc142bd317522926d93d2a0 269 SUPERFAMILY SSF47413 5 70 1.06E-9 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 M892_02840 1560e7533fc142bd317522926d93d2a0 269 SMART SM00530 12 66 0.0013 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 M892_24915 b222b4cbe428b4777bf8b1314b355982 404 SUPERFAMILY SSF103473 6 393 6.8E-59 T 12-10-2018 IPR036259 MFS transporter superfamily M892_24915 b222b4cbe428b4777bf8b1314b355982 404 Gene3D G3DSA:1.20.1250.20 8 393 4.2E-52 T 12-10-2018 M892_24915 b222b4cbe428b4777bf8b1314b355982 404 Pfam PF07690 Major Facilitator Superfamily 16 357 1.3E-38 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 M892_08720 4c06dadba40fc7d8e9e36e811ddbe93b 176 Pfam PF05068 Mannitol repressor 7 170 1.5E-61 T 12-10-2018 IPR007761 Mannitol repressor MtlR-like M892_08720 4c06dadba40fc7d8e9e36e811ddbe93b 176 SUPERFAMILY SSF158668 4 170 1.23E-58 T 12-10-2018 IPR038026 MtlR-like superfamily M892_08720 4c06dadba40fc7d8e9e36e811ddbe93b 176 Gene3D G3DSA:1.20.120.330 1 172 2.7E-72 T 12-10-2018 M892_04650 86253b4b9c71561c02b50d827297b1b4 433 Pfam PF16697 Inner membrane component of T3SS, cytoplasmic domain 7 98 6.6E-16 T 12-10-2018 IPR032030 YscD, cytoplasmic domain M892_04650 86253b4b9c71561c02b50d827297b1b4 433 TIGRFAM TIGR02500 type_III_yscD: type III secretion apparatus protein, YscD/HrpQ family 4 422 1.0E-109 T 12-10-2018 IPR012843 Type III secretion system YscD/HrpQ M892_04650 86253b4b9c71561c02b50d827297b1b4 433 Pfam PF16693 Inner membrane component of T3SS, periplasmic domain 170 422 3.7E-123 T 12-10-2018 IPR032034 Yop protein translocation protein D, periplasmic domain M892_04650 86253b4b9c71561c02b50d827297b1b4 433 Gene3D G3DSA:3.30.70.1770 296 357 3.0E-9 T 12-10-2018 M892_04650 86253b4b9c71561c02b50d827297b1b4 433 Gene3D G3DSA:2.60.200.20 1 121 3.2E-14 T 12-10-2018 M892_04650 86253b4b9c71561c02b50d827297b1b4 433 SUPERFAMILY SSF49879 12 95 9.63E-7 T 12-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 M892_18700 57a2ccf20aa1483e3d2855c0cd6c174e 457 Pfam PF16750 Sensor domain of 2-component histidine kinase 49 149 2.9E-28 T 12-10-2018 IPR031930 2-component histidine kinase, sensor domain M892_18700 57a2ccf20aa1483e3d2855c0cd6c174e 457 SUPERFAMILY SSF55874 288 455 1.3E-34 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_18700 57a2ccf20aa1483e3d2855c0cd6c174e 457 Gene3D G3DSA:3.30.565.10 310 457 1.2E-30 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_18700 57a2ccf20aa1483e3d2855c0cd6c174e 457 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 346 454 1.2E-21 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_18700 57a2ccf20aa1483e3d2855c0cd6c174e 457 SUPERFAMILY SSF47384 217 297 3.14E-14 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M892_18700 57a2ccf20aa1483e3d2855c0cd6c174e 457 SMART SM00388 234 298 1.4E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M892_18700 57a2ccf20aa1483e3d2855c0cd6c174e 457 SMART SM00304 178 233 5.4E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M892_18700 57a2ccf20aa1483e3d2855c0cd6c174e 457 Pfam PF00512 His Kinase A (phospho-acceptor) domain 235 297 1.1E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M892_18700 57a2ccf20aa1483e3d2855c0cd6c174e 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 402 412 1.1E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_18700 57a2ccf20aa1483e3d2855c0cd6c174e 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 384 398 1.1E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_18700 57a2ccf20aa1483e3d2855c0cd6c174e 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 437 1.1E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_18700 57a2ccf20aa1483e3d2855c0cd6c174e 457 SUPERFAMILY SSF158472 178 230 4.45E-6 T 12-10-2018 M892_18700 57a2ccf20aa1483e3d2855c0cd6c174e 457 SMART SM00387 343 457 3.4E-26 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_18700 57a2ccf20aa1483e3d2855c0cd6c174e 457 Pfam PF00672 HAMP domain 178 229 2.3E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M892_18700 57a2ccf20aa1483e3d2855c0cd6c174e 457 Gene3D G3DSA:3.30.450.170 39 150 1.4E-7 T 12-10-2018 IPR038428 2-component histidine kinase, sensor domain superfamily M892_18700 57a2ccf20aa1483e3d2855c0cd6c174e 457 Gene3D G3DSA:1.10.287.130 182 299 5.2E-26 T 12-10-2018 M892_20145 8d906ad774b6e90bc00d73adc5c38916 444 SUPERFAMILY SSF51338 4 431 3.03E-28 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 M892_20145 8d906ad774b6e90bc00d73adc5c38916 444 Gene3D G3DSA:2.30.40.10 6 425 1.7E-134 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 M892_20145 8d906ad774b6e90bc00d73adc5c38916 444 SUPERFAMILY SSF51556 55 371 2.53E-91 T 12-10-2018 IPR032466 Metal-dependent hydrolase M892_20145 8d906ad774b6e90bc00d73adc5c38916 444 ProSitePatterns PS00483 Dihydroorotase signature 2. 306 317 - T 12-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 M892_20145 8d906ad774b6e90bc00d73adc5c38916 444 Pfam PF01979 Amidohydrolase family 51 424 7.0E-20 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 M892_20145 8d906ad774b6e90bc00d73adc5c38916 444 Gene3D G3DSA:3.20.20.140 56 410 1.7E-134 T 12-10-2018 M892_08420 797877bbd09d6e51ffd465c09985d28e 316 Gene3D G3DSA:1.10.150.170 112 218 1.9E-100 T 12-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 M892_08420 797877bbd09d6e51ffd465c09985d28e 316 PIRSF PIRSF004486 1 316 8.0E-101 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 M892_08420 797877bbd09d6e51ffd465c09985d28e 316 SUPERFAMILY SSF81799 113 216 6.41E-31 T 12-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 M892_08420 797877bbd09d6e51ffd465c09985d28e 316 Pfam PF01795 MraW methylase family 5 315 8.8E-109 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 M892_08420 797877bbd09d6e51ffd465c09985d28e 316 Gene3D G3DSA:3.40.50.150 10 315 1.9E-100 T 12-10-2018 M892_08420 797877bbd09d6e51ffd465c09985d28e 316 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 316 37.603 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 M892_08420 797877bbd09d6e51ffd465c09985d28e 316 SUPERFAMILY SSF53335 7 316 2.9E-43 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M892_08420 797877bbd09d6e51ffd465c09985d28e 316 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 2 315 1.6E-117 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 M892_13400 7d937b6431ab500dac0658f31a5f1272 212 PIRSF PIRSF016938 3 206 7.5E-33 T 12-10-2018 IPR026279 Sigma-E factor negative regulatory protein RseA GO:0016989 M892_13400 7d937b6431ab500dac0658f31a5f1272 212 Gene3D G3DSA:1.10.10.880 6 71 7.1E-25 T 12-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 M892_13400 7d937b6431ab500dac0658f31a5f1272 212 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 5 103 6.5E-35 T 12-10-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 M892_13400 7d937b6431ab500dac0658f31a5f1272 212 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 144 195 1.4E-19 T 12-10-2018 IPR005573 Anti sigma-E protein RseA, C-terminal M892_13400 7d937b6431ab500dac0658f31a5f1272 212 SUPERFAMILY SSF89069 8 71 3.01E-21 T 12-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 M892_11120 1fe7f89c0d06e36c441866041cb3511f 312 Gene3D G3DSA:3.30.160.40 222 307 2.1E-27 T 12-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 M892_11120 1fe7f89c0d06e36c441866041cb3511f 312 PRINTS PR00151 Porphobilinogen deaminase signature 125 142 1.0E-47 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 M892_11120 1fe7f89c0d06e36c441866041cb3511f 312 PRINTS PR00151 Porphobilinogen deaminase signature 46 66 1.0E-47 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 M892_11120 1fe7f89c0d06e36c441866041cb3511f 312 PRINTS PR00151 Porphobilinogen deaminase signature 77 96 1.0E-47 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 M892_11120 1fe7f89c0d06e36c441866041cb3511f 312 PRINTS PR00151 Porphobilinogen deaminase signature 144 161 1.0E-47 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 M892_11120 1fe7f89c0d06e36c441866041cb3511f 312 PRINTS PR00151 Porphobilinogen deaminase signature 231 248 1.0E-47 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 M892_11120 1fe7f89c0d06e36c441866041cb3511f 312 Gene3D G3DSA:3.40.190.10 7 211 1.5E-85 T 12-10-2018 M892_11120 1fe7f89c0d06e36c441866041cb3511f 312 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 7 213 4.4E-80 T 12-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 M892_11120 1fe7f89c0d06e36c441866041cb3511f 312 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 6 298 40.132 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 M892_11120 1fe7f89c0d06e36c441866041cb3511f 312 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 232 248 - T 12-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 M892_11120 1fe7f89c0d06e36c441866041cb3511f 312 SUPERFAMILY SSF53850 6 220 4.56E-86 T 12-10-2018 M892_11120 1fe7f89c0d06e36c441866041cb3511f 312 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 228 296 1.2E-19 T 12-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 M892_11120 1fe7f89c0d06e36c441866041cb3511f 312 SUPERFAMILY SSF54782 221 310 1.83E-27 T 12-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 M892_11120 1fe7f89c0d06e36c441866041cb3511f 312 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 7 298 4.5E-115 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 M892_11120 1fe7f89c0d06e36c441866041cb3511f 312 Gene3D G3DSA:3.40.190.10 104 203 1.5E-85 T 12-10-2018 M892_11120 1fe7f89c0d06e36c441866041cb3511f 312 PIRSF PIRSF001438 1 312 1.5E-122 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 M892_08695 7632df679415fcbc6295b2ad89f80c75 239 PIRSF PIRSF029033 1 239 8.3E-110 T 12-10-2018 IPR016907 Uncharacterised conserved protein UCP029033, periplasmic protein M892_08695 7632df679415fcbc6295b2ad89f80c75 239 Pfam PF04402 Protein of unknown function (DUF541) 41 210 3.0E-16 T 12-10-2018 IPR007497 Protein of unknown function DUF541 M892_09840 ec05e41c3fce15cc2c8410f08f4a613a 128 SUPERFAMILY SSF55174 8 105 1.18E-29 T 12-10-2018 M892_09840 ec05e41c3fce15cc2c8410f08f4a613a 128 SMART SM00363 8 71 1.4E-11 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_09840 ec05e41c3fce15cc2c8410f08f4a613a 128 Pfam PF01479 S4 domain 8 54 4.0E-13 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_09840 ec05e41c3fce15cc2c8410f08f4a613a 128 PIRSF PIRSF016821 5 128 3.0E-42 T 12-10-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 M892_09840 ec05e41c3fce15cc2c8410f08f4a613a 128 Gene3D G3DSA:3.10.290.10 2 107 2.8E-37 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 M892_10725 330bf5ea082dd4417a8ec50e93abdb27 340 Hamap MF_01497 Stress response kinase A [srkA]. 16 330 46.97 T 12-10-2018 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 M892_10725 330bf5ea082dd4417a8ec50e93abdb27 340 Pfam PF01636 Phosphotransferase enzyme family 48 268 1.4E-39 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase M892_10725 330bf5ea082dd4417a8ec50e93abdb27 340 SUPERFAMILY SSF56112 18 340 1.46E-89 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily M892_10725 330bf5ea082dd4417a8ec50e93abdb27 340 Gene3D G3DSA:3.30.200.70 25 120 3.0E-124 T 12-10-2018 M892_10725 330bf5ea082dd4417a8ec50e93abdb27 340 Gene3D G3DSA:1.20.1270.170 161 319 3.0E-124 T 12-10-2018 M892_10725 330bf5ea082dd4417a8ec50e93abdb27 340 Gene3D G3DSA:1.10.510.10 72 270 3.0E-124 T 12-10-2018 M892_07195 2ea8f3de9cf912db009ee8c326320ba6 1298 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1298 21.339 T 12-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 M892_07195 2ea8f3de9cf912db009ee8c326320ba6 1298 SUPERFAMILY SSF109736 156 221 3.53E-20 T 12-10-2018 M892_07195 2ea8f3de9cf912db009ee8c326320ba6 1298 SUPERFAMILY SSF82697 1 151 4.76E-51 T 12-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 M892_07195 2ea8f3de9cf912db009ee8c326320ba6 1298 SUPERFAMILY SSF56042 433 616 4.19E-53 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily M892_07195 2ea8f3de9cf912db009ee8c326320ba6 1298 SUPERFAMILY SSF55326 619 817 7.06E-70 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily M892_07195 2ea8f3de9cf912db009ee8c326320ba6 1298 Gene3D G3DSA:3.30.1330.10 615 808 6.0E-26 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily M892_07195 2ea8f3de9cf912db009ee8c326320ba6 1298 SUPERFAMILY SSF56042 825 1036 1.36E-54 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily M892_07195 2ea8f3de9cf912db009ee8c326320ba6 1298 Gene3D G3DSA:3.90.650.10 421 607 4.7E-59 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily M892_07195 2ea8f3de9cf912db009ee8c326320ba6 1298 Gene3D G3DSA:1.10.8.750 153 214 4.3E-26 T 12-10-2018 M892_07195 2ea8f3de9cf912db009ee8c326320ba6 1298 SUPERFAMILY SSF55326 222 429 1.67E-64 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily M892_07195 2ea8f3de9cf912db009ee8c326320ba6 1298 SUPERFAMILY SSF52317 1038 1296 1.99E-98 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M892_07195 2ea8f3de9cf912db009ee8c326320ba6 1298 Gene3D G3DSA:3.30.1330.10 215 420 2.9E-41 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily M892_07195 2ea8f3de9cf912db009ee8c326320ba6 1298 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1042 1295 2.4E-106 T 12-10-2018 M892_07195 2ea8f3de9cf912db009ee8c326320ba6 1298 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 3 1296 0.0 T 12-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 M892_07195 2ea8f3de9cf912db009ee8c326320ba6 1298 Gene3D G3DSA:3.90.650.10 809 983 1.7E-30 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily M892_07195 2ea8f3de9cf912db009ee8c326320ba6 1298 Gene3D G3DSA:3.40.50.880 984 1298 4.0E-140 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M892_07195 2ea8f3de9cf912db009ee8c326320ba6 1298 Pfam PF02769 AIR synthase related protein, C-terminal domain 835 969 1.2E-13 T 12-10-2018 IPR010918 PurM-like, C-terminal domain M892_07195 2ea8f3de9cf912db009ee8c326320ba6 1298 Pfam PF02769 AIR synthase related protein, C-terminal domain 433 590 1.9E-27 T 12-10-2018 IPR010918 PurM-like, C-terminal domain M892_07195 2ea8f3de9cf912db009ee8c326320ba6 1298 SMART SM01211 1042 1297 3.8E-158 T 12-10-2018 M892_04670 9ca947e7580ed35051773237455bcbd1 286 SUPERFAMILY SSF46689 180 226 3.14E-5 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_04670 9ca947e7580ed35051773237455bcbd1 286 Pfam PF12833 Helix-turn-helix domain 199 276 3.2E-25 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M892_04670 9ca947e7580ed35051773237455bcbd1 286 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 230 272 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 M892_04670 9ca947e7580ed35051773237455bcbd1 286 SMART SM00342 193 276 1.5E-30 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M892_04670 9ca947e7580ed35051773237455bcbd1 286 SUPERFAMILY SSF46689 229 277 6.27E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_04670 9ca947e7580ed35051773237455bcbd1 286 Gene3D G3DSA:1.10.10.60 172 284 2.1E-29 T 12-10-2018 M892_04670 9ca947e7580ed35051773237455bcbd1 286 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 260 276 7.9E-8 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 M892_04670 9ca947e7580ed35051773237455bcbd1 286 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 245 260 7.9E-8 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 M892_10070 d2c194b5da35ba37926d3734e9c33a9e 729 SMART SM00636 35 320 5.4E-4 T 12-10-2018 IPR011583 Chitinase II GO:0008061 M892_10070 d2c194b5da35ba37926d3734e9c33a9e 729 Gene3D G3DSA:3.20.20.80 29 349 5.8E-96 T 12-10-2018 M892_10070 d2c194b5da35ba37926d3734e9c33a9e 729 Gene3D G3DSA:2.60.40.2550 570 659 1.4E-8 T 12-10-2018 M892_10070 d2c194b5da35ba37926d3734e9c33a9e 729 Pfam PF16403 Domain of unknown function (DUF5011) 357 427 2.5E-18 T 12-10-2018 IPR032179 Domain of unknown function DUF5011 M892_10070 d2c194b5da35ba37926d3734e9c33a9e 729 Pfam PF16403 Domain of unknown function (DUF5011) 435 504 6.3E-16 T 12-10-2018 IPR032179 Domain of unknown function DUF5011 M892_10070 d2c194b5da35ba37926d3734e9c33a9e 729 ProSitePatterns PS01095 Chitinases family 18 active site. 149 157 - T 12-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 M892_10070 d2c194b5da35ba37926d3734e9c33a9e 729 Gene3D G3DSA:2.10.10.20 511 554 2.0E-17 T 12-10-2018 M892_10070 d2c194b5da35ba37926d3734e9c33a9e 729 SUPERFAMILY SSF51445 33 330 8.98E-59 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily M892_10070 d2c194b5da35ba37926d3734e9c33a9e 729 SMART SM00495 675 725 1.3E-9 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 M892_10070 d2c194b5da35ba37926d3734e9c33a9e 729 SMART SM00495 511 556 2.0E-14 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 M892_10070 d2c194b5da35ba37926d3734e9c33a9e 729 Pfam PF00704 Glycosyl hydrolases family 18 37 320 1.5E-34 T 12-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 M892_10070 d2c194b5da35ba37926d3734e9c33a9e 729 SUPERFAMILY SSF51055 508 556 3.4E-13 T 12-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 M892_10070 d2c194b5da35ba37926d3734e9c33a9e 729 Gene3D G3DSA:2.60.40.10 352 428 8.9E-25 T 12-10-2018 IPR013783 Immunoglobulin-like fold M892_10070 d2c194b5da35ba37926d3734e9c33a9e 729 Gene3D G3DSA:2.60.40.10 429 504 1.2E-26 T 12-10-2018 IPR013783 Immunoglobulin-like fold M892_22270 d2c194b5da35ba37926d3734e9c33a9e 729 SMART SM00636 35 320 5.4E-4 T 12-10-2018 IPR011583 Chitinase II GO:0008061 M892_22270 d2c194b5da35ba37926d3734e9c33a9e 729 Gene3D G3DSA:3.20.20.80 29 349 5.8E-96 T 12-10-2018 M892_22270 d2c194b5da35ba37926d3734e9c33a9e 729 Gene3D G3DSA:2.60.40.2550 570 659 1.4E-8 T 12-10-2018 M892_22270 d2c194b5da35ba37926d3734e9c33a9e 729 Pfam PF16403 Domain of unknown function (DUF5011) 357 427 2.5E-18 T 12-10-2018 IPR032179 Domain of unknown function DUF5011 M892_22270 d2c194b5da35ba37926d3734e9c33a9e 729 Pfam PF16403 Domain of unknown function (DUF5011) 435 504 6.3E-16 T 12-10-2018 IPR032179 Domain of unknown function DUF5011 M892_22270 d2c194b5da35ba37926d3734e9c33a9e 729 ProSitePatterns PS01095 Chitinases family 18 active site. 149 157 - T 12-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 M892_22270 d2c194b5da35ba37926d3734e9c33a9e 729 Gene3D G3DSA:2.10.10.20 511 554 2.0E-17 T 12-10-2018 M892_22270 d2c194b5da35ba37926d3734e9c33a9e 729 SUPERFAMILY SSF51445 33 330 8.98E-59 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily M892_22270 d2c194b5da35ba37926d3734e9c33a9e 729 SMART SM00495 675 725 1.3E-9 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 M892_22270 d2c194b5da35ba37926d3734e9c33a9e 729 SMART SM00495 511 556 2.0E-14 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 M892_22270 d2c194b5da35ba37926d3734e9c33a9e 729 Pfam PF00704 Glycosyl hydrolases family 18 37 320 1.5E-34 T 12-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 M892_22270 d2c194b5da35ba37926d3734e9c33a9e 729 SUPERFAMILY SSF51055 508 556 3.4E-13 T 12-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 M892_22270 d2c194b5da35ba37926d3734e9c33a9e 729 Gene3D G3DSA:2.60.40.10 352 428 8.9E-25 T 12-10-2018 IPR013783 Immunoglobulin-like fold M892_22270 d2c194b5da35ba37926d3734e9c33a9e 729 Gene3D G3DSA:2.60.40.10 429 504 1.2E-26 T 12-10-2018 IPR013783 Immunoglobulin-like fold M892_25650 cebb8a2b8611cd733c549da2c972d6d8 316 Pfam PF04463 Protein of unknown function (DUF523) 7 148 3.9E-36 T 12-10-2018 IPR007553 Domain of unknown function DUF523 M892_25650 cebb8a2b8611cd733c549da2c972d6d8 316 Pfam PF08349 Protein of unknown function (DUF1722) 191 307 1.8E-44 T 12-10-2018 IPR013560 Domain of unknown function DUF1722 M892_25650 cebb8a2b8611cd733c549da2c972d6d8 316 PIRSF PIRSF037004 1 316 4.1E-140 T 12-10-2018 IPR017087 Uncharacterised conserved protein UCP037004 M892_21490 1d5cf68b05641e7bd3328e29ba029891 690 Pfam PF00072 Response regulator receiver domain 574 686 3.2E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_21490 1d5cf68b05641e7bd3328e29ba029891 690 SMART SM00387 314 422 4.7E-22 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_21490 1d5cf68b05641e7bd3328e29ba029891 690 Gene3D G3DSA:3.30.565.10 268 420 4.1E-29 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_21490 1d5cf68b05641e7bd3328e29ba029891 690 SMART SM00448 572 686 1.9E-31 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_21490 1d5cf68b05641e7bd3328e29ba029891 690 SUPERFAMILY SSF47384 180 230 1.96E-5 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M892_21490 1d5cf68b05641e7bd3328e29ba029891 690 Gene3D G3DSA:3.40.50.2300 567 690 3.6E-35 T 12-10-2018 M892_21490 1d5cf68b05641e7bd3328e29ba029891 690 PRINTS PR00344 Bacterial sensor protein C-terminal signature 352 366 7.8E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_21490 1d5cf68b05641e7bd3328e29ba029891 690 PRINTS PR00344 Bacterial sensor protein C-terminal signature 406 419 7.8E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_21490 1d5cf68b05641e7bd3328e29ba029891 690 PRINTS PR00344 Bacterial sensor protein C-terminal signature 370 380 7.8E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_21490 1d5cf68b05641e7bd3328e29ba029891 690 PRINTS PR00344 Bacterial sensor protein C-terminal signature 382 400 7.8E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_21490 1d5cf68b05641e7bd3328e29ba029891 690 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 317 419 1.7E-17 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_21490 1d5cf68b05641e7bd3328e29ba029891 690 Gene3D G3DSA:1.10.287.130 177 267 4.6E-6 T 12-10-2018 M892_21490 1d5cf68b05641e7bd3328e29ba029891 690 SUPERFAMILY SSF55874 259 421 3.8E-31 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_21490 1d5cf68b05641e7bd3328e29ba029891 690 SUPERFAMILY SSF52172 570 690 6.26E-35 T 12-10-2018 IPR011006 CheY-like superfamily M892_09600 3d0b42121835fbe7e7d175f8f9221e68 224 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 21 198 3.3E-69 T 12-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 M892_09600 3d0b42121835fbe7e7d175f8f9221e68 224 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 224 36.032 T 12-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 M892_09600 3d0b42121835fbe7e7d175f8f9221e68 224 SUPERFAMILY SSF53271 13 223 4.26E-50 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like M892_09600 3d0b42121835fbe7e7d175f8f9221e68 224 Pfam PF00156 Phosphoribosyl transferase domain 54 172 1.1E-11 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 M892_09600 3d0b42121835fbe7e7d175f8f9221e68 224 Gene3D G3DSA:3.40.50.2020 12 224 3.2E-79 T 12-10-2018 M892_09605 9feaf52640d9af773f68b4906702a8bd 240 ProSitePatterns PS01277 Ribonuclease PH signature. 118 130 - T 12-10-2018 IPR018336 Ribonuclease PH, conserved site M892_09605 9feaf52640d9af773f68b4906702a8bd 240 Hamap MF_00564 Ribonuclease PH [rph]. 13 239 43.75 T 12-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 M892_09605 9feaf52640d9af773f68b4906702a8bd 240 Gene3D G3DSA:3.30.230.70 15 240 4.6E-63 T 12-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 M892_09605 9feaf52640d9af773f68b4906702a8bd 240 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 4 238 6.7E-111 T 12-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 M892_09605 9feaf52640d9af773f68b4906702a8bd 240 SUPERFAMILY SSF54211 3 183 3.59E-45 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold M892_09605 9feaf52640d9af773f68b4906702a8bd 240 SUPERFAMILY SSF55666 155 238 5.63E-25 T 12-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 M892_09605 9feaf52640d9af773f68b4906702a8bd 240 Pfam PF01138 3' exoribonuclease family, domain 1 12 142 1.6E-23 T 12-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 M892_09605 9feaf52640d9af773f68b4906702a8bd 240 Pfam PF03725 3' exoribonuclease family, domain 2 161 224 3.0E-10 T 12-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 M892_20780 67721135fa7386872b47850f80df16a5 316 TIGRFAM TIGR00874 talAB: transaldolase 3 316 8.1E-154 T 12-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 M892_20780 67721135fa7386872b47850f80df16a5 316 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 12-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 M892_20780 67721135fa7386872b47850f80df16a5 316 SUPERFAMILY SSF51569 1 315 1.47E-113 T 12-10-2018 M892_20780 67721135fa7386872b47850f80df16a5 316 Gene3D G3DSA:3.20.20.70 2 316 5.3E-138 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M892_20780 67721135fa7386872b47850f80df16a5 316 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 14 312 1.1E-100 T 12-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 M892_20780 67721135fa7386872b47850f80df16a5 316 Hamap MF_00492 Transaldolase [tal]. 2 316 50.85 T 12-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 M892_20780 67721135fa7386872b47850f80df16a5 316 ProSitePatterns PS00958 Transaldolase active site. 129 146 - T 12-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 M892_04190 2697d6454724f249970db55e8f371094 164 ProSitePatterns PS00519 AsnC-type HTH domain signature. 30 56 - T 12-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site M892_04190 2697d6454724f249970db55e8f371094 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 9.1E-23 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 M892_04190 2697d6454724f249970db55e8f371094 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 9.1E-23 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 M892_04190 2697d6454724f249970db55e8f371094 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 9.1E-23 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 M892_04190 2697d6454724f249970db55e8f371094 164 SUPERFAMILY SSF46785 12 70 2.36E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_04190 2697d6454724f249970db55e8f371094 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 12 59 6.2E-22 T 12-10-2018 M892_04190 2697d6454724f249970db55e8f371094 164 Pfam PF01037 Lrp/AsnC ligand binding domain 78 152 7.6E-24 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain M892_04190 2697d6454724f249970db55e8f371094 164 Gene3D G3DSA:1.10.10.10 1 65 9.8E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_04190 2697d6454724f249970db55e8f371094 164 Gene3D G3DSA:3.30.70.920 66 149 4.3E-24 T 12-10-2018 M892_04190 2697d6454724f249970db55e8f371094 164 SMART SM00344 12 121 1.8E-55 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 M892_04190 2697d6454724f249970db55e8f371094 164 SUPERFAMILY SSF54909 74 158 4.69E-22 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel M892_14410 e1fc65d88ec02967b304b276e95dab57 245 SMART SM01038 2 212 9.9E-74 T 12-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 M892_14410 e1fc65d88ec02967b304b276e95dab57 245 SUPERFAMILY SSF74650 4 214 3.3E-71 T 12-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 M892_14410 e1fc65d88ec02967b304b276e95dab57 245 Gene3D G3DSA:2.70.98.10 1 217 3.3E-69 T 12-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 M892_14410 e1fc65d88ec02967b304b276e95dab57 245 Pfam PF02929 Beta galactosidase small chain 14 211 1.2E-56 T 12-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 M892_02130 1388df6d3687bcfe65058061de41fc33 672 Gene3D G3DSA:1.10.287.950 339 669 2.2E-57 T 12-10-2018 M892_02130 1388df6d3687bcfe65058061de41fc33 672 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 468 633 1.7E-37 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M892_02130 1388df6d3687bcfe65058061de41fc33 672 SUPERFAMILY SSF58104 368 668 4.19E-57 T 12-10-2018 M892_02130 1388df6d3687bcfe65058061de41fc33 672 SMART SM00283 405 667 1.4E-40 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M892_08390 ba2ec3ea162c1ee69e12d544e1e5fb28 437 Gene3D G3DSA:3.40.1190.10 97 299 1.4E-67 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 M892_08390 ba2ec3ea162c1ee69e12d544e1e5fb28 437 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 8 436 33.214 T 12-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 M892_08390 ba2ec3ea162c1ee69e12d544e1e5fb28 437 Gene3D G3DSA:3.90.190.20 300 433 1.6E-39 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 M892_08390 ba2ec3ea162c1ee69e12d544e1e5fb28 437 Pfam PF02875 Mur ligase family, glutamate ligase domain 302 355 5.9E-6 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 M892_08390 ba2ec3ea162c1ee69e12d544e1e5fb28 437 SUPERFAMILY SSF53623 98 297 7.59E-54 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 M892_08390 ba2ec3ea162c1ee69e12d544e1e5fb28 437 SUPERFAMILY SSF53244 299 435 1.24E-42 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 M892_08390 ba2ec3ea162c1ee69e12d544e1e5fb28 437 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 9 434 5.4E-132 T 12-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 M892_08390 ba2ec3ea162c1ee69e12d544e1e5fb28 437 SUPERFAMILY SSF51984 9 97 4.97E-17 T 12-10-2018 M892_08390 ba2ec3ea162c1ee69e12d544e1e5fb28 437 Gene3D G3DSA:3.40.50.720 5 96 4.2E-20 T 12-10-2018 M892_08390 ba2ec3ea162c1ee69e12d544e1e5fb28 437 Pfam PF08245 Mur ligase middle domain 113 279 4.5E-31 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 M892_20035 cda13eb21ac4ca83b28ee2ae9f562bc1 510 Pfam PF13007 Transposase C of IS166 homeodomain 38 108 2.2E-14 T 12-10-2018 IPR024463 Transposase TnpC, homeodomain M892_20035 cda13eb21ac4ca83b28ee2ae9f562bc1 510 Pfam PF03050 Transposase IS66 family 180 463 1.1E-100 T 12-10-2018 IPR004291 Transposase, IS66 M892_20035 cda13eb21ac4ca83b28ee2ae9f562bc1 510 Pfam PF13817 IS66 C-terminal element 470 506 7.5E-8 T 12-10-2018 IPR039552 Transposase IS66, C-terminal M892_20035 cda13eb21ac4ca83b28ee2ae9f562bc1 510 Pfam PF13005 zinc-finger binding domain of transposase IS66 116 160 1.6E-16 T 12-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 M892_06355 4f7e5b98b9f7b2e3e8f7b497c1d0334e 529 Gene3D G3DSA:1.20.1530.20 2 361 8.4E-48 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily M892_06355 4f7e5b98b9f7b2e3e8f7b497c1d0334e 529 SUPERFAMILY SSF51735 387 518 3.58E-15 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_06355 4f7e5b98b9f7b2e3e8f7b497c1d0334e 529 Pfam PF02254 TrkA-N domain 388 504 7.9E-19 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 M892_06355 4f7e5b98b9f7b2e3e8f7b497c1d0334e 529 Gene3D G3DSA:3.40.50.720 379 529 4.6E-33 T 12-10-2018 M892_06355 4f7e5b98b9f7b2e3e8f7b497c1d0334e 529 Pfam PF00999 Sodium/hydrogen exchanger family 3 349 5.8E-39 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 M892_03985 f1f2aa3effb2f3aea642ade68e106442 137 SUPERFAMILY SSF103642 114 137 3.27E-5 T 12-10-2018 M892_03985 f1f2aa3effb2f3aea642ade68e106442 137 SUPERFAMILY SSF54427 1 95 1.12E-30 T 12-10-2018 IPR032710 NTF2-like domain superfamily M892_03985 f1f2aa3effb2f3aea642ade68e106442 137 Pfam PF02810 SEC-C motif 117 131 5.3E-8 T 12-10-2018 IPR004027 SEC-C motif M892_03985 f1f2aa3effb2f3aea642ade68e106442 137 Gene3D G3DSA:3.10.450.50 1 137 6.3E-43 T 12-10-2018 M892_10570 2d938414b31bcb58a12f58388c997eef 453 Pfam PF12631 MnmE helical domain 122 450 1.9E-61 T 12-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 M892_10570 2d938414b31bcb58a12f58388c997eef 453 Gene3D G3DSA:1.20.120.430 121 453 2.9E-103 T 12-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 M892_10570 2d938414b31bcb58a12f58388c997eef 453 Gene3D G3DSA:3.30.1360.120 1 120 5.6E-39 T 12-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 M892_10570 2d938414b31bcb58a12f58388c997eef 453 Pfam PF10396 GTP-binding protein TrmE N-terminus 5 119 2.3E-35 T 12-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 M892_10570 2d938414b31bcb58a12f58388c997eef 453 SUPERFAMILY SSF116878 120 453 1.26E-52 T 12-10-2018 M892_10570 2d938414b31bcb58a12f58388c997eef 453 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 215 368 2.2E-21 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 M892_10570 2d938414b31bcb58a12f58388c997eef 453 Pfam PF01926 50S ribosome-binding GTPase 217 306 1.2E-23 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 M892_10570 2d938414b31bcb58a12f58388c997eef 453 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 4 453 32.843 T 12-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 M892_10570 2d938414b31bcb58a12f58388c997eef 453 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 10 453 4.1E-101 T 12-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 M892_10570 2d938414b31bcb58a12f58388c997eef 453 SUPERFAMILY SSF52540 70 371 1.33E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_10570 2d938414b31bcb58a12f58388c997eef 453 Gene3D G3DSA:3.40.50.300 216 381 2.9E-103 T 12-10-2018 M892_19595 04d726103c0999f913b975339a57eea7 187 Pfam PF13302 Acetyltransferase (GNAT) domain 7 145 1.9E-14 T 12-10-2018 IPR000182 GNAT domain M892_19595 04d726103c0999f913b975339a57eea7 187 Gene3D G3DSA:3.40.630.30 2 176 2.2E-33 T 12-10-2018 M892_19595 04d726103c0999f913b975339a57eea7 187 SUPERFAMILY SSF55729 5 169 5.13E-31 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_09055 a0c90d1c8e25738a51f5f76ea94eca32 459 Pfam PF00271 Helicase conserved C-terminal domain 231 338 1.8E-27 T 12-10-2018 IPR001650 Helicase, C-terminal M892_09055 a0c90d1c8e25738a51f5f76ea94eca32 459 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site M892_09055 a0c90d1c8e25738a51f5f76ea94eca32 459 Gene3D G3DSA:3.40.50.300 2 210 1.0E-74 T 12-10-2018 M892_09055 a0c90d1c8e25738a51f5f76ea94eca32 459 SMART SM00487 23 220 8.0E-56 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain M892_09055 a0c90d1c8e25738a51f5f76ea94eca32 459 SMART SM00490 257 338 1.1E-26 T 12-10-2018 IPR001650 Helicase, C-terminal M892_09055 a0c90d1c8e25738a51f5f76ea94eca32 459 SUPERFAMILY SSF52540 73 357 8.05E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_09055 a0c90d1c8e25738a51f5f76ea94eca32 459 Pfam PF03880 DbpA RNA binding domain 386 456 5.2E-21 T 12-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain M892_09055 a0c90d1c8e25738a51f5f76ea94eca32 459 Pfam PF00270 DEAD/DEAH box helicase 28 194 1.6E-46 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 M892_09055 a0c90d1c8e25738a51f5f76ea94eca32 459 Gene3D G3DSA:3.40.50.300 211 388 5.3E-45 T 12-10-2018 M892_09055 a0c90d1c8e25738a51f5f76ea94eca32 459 Gene3D G3DSA:3.30.70.330 389 458 3.9E-18 T 12-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily M892_04380 0f683fbc9f4cf992eb51167a6c56b47b 248 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 2.0E-6 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M892_04380 0f683fbc9f4cf992eb51167a6c56b47b 248 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 2.0E-6 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M892_04380 0f683fbc9f4cf992eb51167a6c56b47b 248 Gene3D G3DSA:1.20.120.530 96 240 8.3E-22 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal M892_04380 0f683fbc9f4cf992eb51167a6c56b47b 248 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 67 7.0E-15 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M892_04380 0f683fbc9f4cf992eb51167a6c56b47b 248 Pfam PF07729 FCD domain 99 226 3.7E-18 T 12-10-2018 IPR011711 GntR, C-terminal M892_04380 0f683fbc9f4cf992eb51167a6c56b47b 248 SUPERFAMILY SSF46785 7 78 4.33E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_04380 0f683fbc9f4cf992eb51167a6c56b47b 248 SUPERFAMILY SSF48008 97 233 2.41E-19 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal M892_04380 0f683fbc9f4cf992eb51167a6c56b47b 248 SMART SM00895 99 228 1.1E-16 T 12-10-2018 IPR011711 GntR, C-terminal M892_04380 0f683fbc9f4cf992eb51167a6c56b47b 248 SMART SM00345 13 74 6.1E-14 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M892_04380 0f683fbc9f4cf992eb51167a6c56b47b 248 Gene3D G3DSA:1.10.10.10 6 76 8.6E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_05960 463fb8ba28bbbf0a5a9ea32f28816c09 435 SUPERFAMILY SSF54534 90 241 1.73E-36 T 12-10-2018 M892_05960 463fb8ba28bbbf0a5a9ea32f28816c09 435 Gene3D G3DSA:3.10.50.40 150 246 2.1E-107 T 12-10-2018 M892_05960 463fb8ba28bbbf0a5a9ea32f28816c09 435 SUPERFAMILY SSF102735 1 131 2.49E-41 T 12-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 M892_05960 463fb8ba28bbbf0a5a9ea32f28816c09 435 Hamap MF_00303 Trigger factor [tig]. 1 418 21.914 T 12-10-2018 IPR005215 Trigger factor GO:0015031 M892_05960 463fb8ba28bbbf0a5a9ea32f28816c09 435 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 156 233 6.6E-13 T 12-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain M892_05960 463fb8ba28bbbf0a5a9ea32f28816c09 435 Gene3D G3DSA:1.10.3120.10 116 417 2.1E-107 T 12-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 M892_05960 463fb8ba28bbbf0a5a9ea32f28816c09 435 Gene3D G3DSA:3.30.70.1050 1 115 5.9E-41 T 12-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 M892_05960 463fb8ba28bbbf0a5a9ea32f28816c09 435 Pfam PF05697 Bacterial trigger factor protein (TF) 1 144 5.5E-43 T 12-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 M892_05960 463fb8ba28bbbf0a5a9ea32f28816c09 435 PIRSF PIRSF003095 1 434 6.5E-128 T 12-10-2018 IPR005215 Trigger factor GO:0015031 M892_05960 463fb8ba28bbbf0a5a9ea32f28816c09 435 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 263 412 2.9E-41 T 12-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 M892_05960 463fb8ba28bbbf0a5a9ea32f28816c09 435 TIGRFAM TIGR00115 tig: trigger factor 11 412 4.9E-144 T 12-10-2018 IPR005215 Trigger factor GO:0015031 M892_05960 463fb8ba28bbbf0a5a9ea32f28816c09 435 SUPERFAMILY SSF109998 248 429 4.61E-50 T 12-10-2018 IPR027304 Trigger factor/SurA domain superfamily M892_08555 dbf76b2b0945c5b616656c23fec0eb8e 272 Pfam PF00520 Ion transport protein 35 225 4.2E-16 T 12-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 M892_08555 dbf76b2b0945c5b616656c23fec0eb8e 272 SUPERFAMILY SSF81324 27 225 6.64E-49 T 12-10-2018 M892_08555 dbf76b2b0945c5b616656c23fec0eb8e 272 PRINTS PR00169 Potassium channel signature 138 161 1.0E-8 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 M892_08555 dbf76b2b0945c5b616656c23fec0eb8e 272 PRINTS PR00169 Potassium channel signature 198 224 1.0E-8 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 M892_08555 dbf76b2b0945c5b616656c23fec0eb8e 272 PRINTS PR00169 Potassium channel signature 169 191 1.0E-8 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 M892_08555 dbf76b2b0945c5b616656c23fec0eb8e 272 Gene3D G3DSA:1.20.120.350 24 140 2.1E-16 T 12-10-2018 IPR027359 Voltage-dependent channel domain superfamily M892_08555 dbf76b2b0945c5b616656c23fec0eb8e 272 Gene3D G3DSA:1.10.287.70 141 239 3.0E-24 T 12-10-2018 M892_25045 2ba58bb790b629fa31d7a3c9150a5f6e 449 SUPERFAMILY SSF51445 12 343 1.42E-61 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily M892_25045 2ba58bb790b629fa31d7a3c9150a5f6e 449 Gene3D G3DSA:3.20.20.80 9 379 1.7E-78 T 12-10-2018 M892_25045 2ba58bb790b629fa31d7a3c9150a5f6e 449 Pfam PF00128 Alpha amylase, catalytic domain 33 235 2.7E-17 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 M892_25045 2ba58bb790b629fa31d7a3c9150a5f6e 449 PRINTS PR00110 Alpha-amylase signature 55 72 7.3E-16 T 12-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 M892_25045 2ba58bb790b629fa31d7a3c9150a5f6e 449 PRINTS PR00110 Alpha-amylase signature 201 212 7.3E-16 T 12-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 M892_25045 2ba58bb790b629fa31d7a3c9150a5f6e 449 PRINTS PR00110 Alpha-amylase signature 296 308 7.3E-16 T 12-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 M892_25045 2ba58bb790b629fa31d7a3c9150a5f6e 449 PRINTS PR00110 Alpha-amylase signature 230 248 7.3E-16 T 12-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 M892_25045 2ba58bb790b629fa31d7a3c9150a5f6e 449 PRINTS PR00110 Alpha-amylase signature 88 99 7.3E-16 T 12-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 M892_25045 2ba58bb790b629fa31d7a3c9150a5f6e 449 SMART SM00642 13 374 7.9E-28 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 M892_12135 165e79dc30a377d1b8ba2fcf2737167b 310 Gene3D G3DSA:3.40.50.300 12 292 3.1E-107 T 12-10-2018 M892_12135 165e79dc30a377d1b8ba2fcf2737167b 310 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 9 294 6.2E-116 T 12-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 M892_12135 165e79dc30a377d1b8ba2fcf2737167b 310 Pfam PF01715 IPP transferase 42 287 1.1E-85 T 12-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 M892_12135 165e79dc30a377d1b8ba2fcf2737167b 310 Gene3D G3DSA:1.10.20.140 115 186 3.1E-107 T 12-10-2018 M892_12135 165e79dc30a377d1b8ba2fcf2737167b 310 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 8 301 30.028 T 12-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 M892_12135 165e79dc30a377d1b8ba2fcf2737167b 310 SUPERFAMILY SSF52540 10 153 1.74E-18 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_19520 21dfac826a8b7d5938ffb264e8c21f35 294 Gene3D G3DSA:3.40.190.10 100 289 3.4E-33 T 12-10-2018 M892_19520 21dfac826a8b7d5938ffb264e8c21f35 294 SUPERFAMILY SSF46785 2 82 1.38E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_19520 21dfac826a8b7d5938ffb264e8c21f35 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 3.9E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_19520 21dfac826a8b7d5938ffb264e8c21f35 294 Gene3D G3DSA:1.10.10.10 5 94 1.2E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_19520 21dfac826a8b7d5938ffb264e8c21f35 294 Gene3D G3DSA:3.40.190.10 159 262 3.4E-33 T 12-10-2018 M892_19520 21dfac826a8b7d5938ffb264e8c21f35 294 SUPERFAMILY SSF53850 88 293 1.14E-23 T 12-10-2018 M892_19520 21dfac826a8b7d5938ffb264e8c21f35 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 7.7E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_19520 21dfac826a8b7d5938ffb264e8c21f35 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 7.7E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_19520 21dfac826a8b7d5938ffb264e8c21f35 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 7.7E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_19520 21dfac826a8b7d5938ffb264e8c21f35 294 Pfam PF03466 LysR substrate binding domain 87 293 5.3E-21 T 12-10-2018 IPR005119 LysR, substrate-binding M892_20995 caefc606cffbf847c4b3671ab6b1bb38 163 SUPERFAMILY SSF52540 18 106 5.08E-13 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_20995 caefc606cffbf847c4b3671ab6b1bb38 163 Gene3D G3DSA:3.40.50.300 13 149 8.0E-14 T 12-10-2018 M892_20995 caefc606cffbf847c4b3671ab6b1bb38 163 Pfam PF00580 UvrD/REP helicase N-terminal domain 18 98 2.3E-8 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 M892_02515 07b619a3cf96812c18bcb86572f52e8d 538 SUPERFAMILY SSF51905 12 489 1.73E-63 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_02515 07b619a3cf96812c18bcb86572f52e8d 538 Gene3D G3DSA:3.50.50.60 11 102 1.4E-22 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_02515 07b619a3cf96812c18bcb86572f52e8d 538 Gene3D G3DSA:3.50.50.60 205 327 1.6E-17 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_02515 07b619a3cf96812c18bcb86572f52e8d 538 Pfam PF01593 Flavin containing amine oxidoreductase 21 488 5.7E-22 T 12-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 M892_02515 07b619a3cf96812c18bcb86572f52e8d 538 TIGRFAM TIGR02734 crtI_fam: phytoene desaturase 13 497 1.1E-168 T 12-10-2018 IPR014105 Carotenoid/retinoid oxidoreductase GO:0016117|GO:0055114 M892_08860 dec3c5b8df160243e2c4af10e87bf025 391 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 1.3E-142 T 12-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 M892_08860 dec3c5b8df160243e2c4af10e87bf025 391 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 12-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 M892_08860 dec3c5b8df160243e2c4af10e87bf025 391 SUPERFAMILY SSF82051 2 157 5.75E-55 T 12-10-2018 IPR036726 GTP1/OBG domain superfamily M892_08860 dec3c5b8df160243e2c4af10e87bf025 391 Pfam PF01926 50S ribosome-binding GTPase 161 284 5.0E-23 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 M892_08860 dec3c5b8df160243e2c4af10e87bf025 391 PIRSF PIRSF002401 1 377 3.1E-136 T 12-10-2018 IPR035101 GTP-binding protein, Obg-type M892_08860 dec3c5b8df160243e2c4af10e87bf025 391 Hamap MF_01454 GTPase Obg [obg]. 2 333 46.813 T 12-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 M892_08860 dec3c5b8df160243e2c4af10e87bf025 391 SUPERFAMILY SSF52540 151 340 2.45E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_08860 dec3c5b8df160243e2c4af10e87bf025 391 Gene3D G3DSA:3.40.50.300 159 336 1.6E-51 T 12-10-2018 M892_08860 dec3c5b8df160243e2c4af10e87bf025 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 7.2E-34 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 M892_08860 dec3c5b8df160243e2c4af10e87bf025 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 7.2E-34 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 M892_08860 dec3c5b8df160243e2c4af10e87bf025 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 7.2E-34 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 M892_08860 dec3c5b8df160243e2c4af10e87bf025 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 7.2E-34 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 M892_08860 dec3c5b8df160243e2c4af10e87bf025 391 Pfam PF01018 GTP1/OBG 4 156 1.9E-55 T 12-10-2018 IPR006169 GTP1/OBG domain M892_08860 dec3c5b8df160243e2c4af10e87bf025 391 Gene3D G3DSA:2.70.210.12 1 158 5.2E-58 T 12-10-2018 IPR036726 GTP1/OBG domain superfamily M892_22115 77a00cbc6ad2d3918d9ede6388f1aa6b 59 Gene3D G3DSA:1.10.3210.10 1 58 8.0E-9 T 12-10-2018 M892_22310 7cfc1ce9ffda880aa98d1b3ae4dbaf55 301 SUPERFAMILY SSF103481 48 143 1.7E-12 T 12-10-2018 M892_22310 7cfc1ce9ffda880aa98d1b3ae4dbaf55 301 Pfam PF00892 EamA-like transporter family 6 141 1.0E-13 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M892_22310 7cfc1ce9ffda880aa98d1b3ae4dbaf55 301 TIGRFAM TIGR00688 rarD: protein RarD 7 259 3.9E-49 T 12-10-2018 IPR004626 RarD protein GO:0005887 M892_22310 7cfc1ce9ffda880aa98d1b3ae4dbaf55 301 SUPERFAMILY SSF103481 207 285 2.35E-7 T 12-10-2018 M892_20390 c88df80b0b770dc2c00304dc1b4b32b3 259 Gene3D G3DSA:3.20.20.10 1 111 1.1E-12 T 12-10-2018 IPR029066 PLP-binding barrel M892_20390 c88df80b0b770dc2c00304dc1b4b32b3 259 Pfam PF01168 Alanine racemase, N-terminal domain 2 95 1.8E-5 T 12-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 M892_20390 c88df80b0b770dc2c00304dc1b4b32b3 259 Gene3D G3DSA:2.40.37.20 112 259 4.7E-45 T 12-10-2018 M892_20390 c88df80b0b770dc2c00304dc1b4b32b3 259 SMART SM01119 150 246 3.6E-30 T 12-10-2018 IPR026956 D-serine dehydratase-like domain M892_20390 c88df80b0b770dc2c00304dc1b4b32b3 259 SUPERFAMILY SSF51419 2 119 2.88E-11 T 12-10-2018 IPR029066 PLP-binding barrel M892_20390 c88df80b0b770dc2c00304dc1b4b32b3 259 Pfam PF14031 Putative serine dehydratase domain 150 244 2.7E-14 T 12-10-2018 IPR026956 D-serine dehydratase-like domain M892_25470 ffe98329a759194bc14013e91d53e85a 241 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 230 5.5E-52 T 12-10-2018 M892_25470 ffe98329a759194bc14013e91d53e85a 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 162 3.0E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_25470 ffe98329a759194bc14013e91d53e85a 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 123 131 3.0E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_25470 ffe98329a759194bc14013e91d53e85a 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 69 80 3.0E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_25470 ffe98329a759194bc14013e91d53e85a 241 SUPERFAMILY SSF51735 3 230 9.45E-66 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_25470 ffe98329a759194bc14013e91d53e85a 241 Gene3D G3DSA:3.40.50.720 2 239 3.4E-67 T 12-10-2018 M892_25470 ffe98329a759194bc14013e91d53e85a 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 193 213 5.6E-32 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_25470 ffe98329a759194bc14013e91d53e85a 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 181 5.6E-32 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_25470 ffe98329a759194bc14013e91d53e85a 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 117 133 5.6E-32 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_25470 ffe98329a759194bc14013e91d53e85a 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 5.6E-32 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_25470 ffe98329a759194bc14013e91d53e85a 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 69 80 5.6E-32 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_25470 ffe98329a759194bc14013e91d53e85a 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 143 162 5.6E-32 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_25470 ffe98329a759194bc14013e91d53e85a 241 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 130 158 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 M892_16930 fd70ae746c31f998a3dff80fd5f1908b 225 SUPERFAMILY SSF46894 123 222 1.73E-20 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M892_16930 fd70ae746c31f998a3dff80fd5f1908b 225 Pfam PF00072 Response regulator receiver domain 4 112 5.3E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_16930 fd70ae746c31f998a3dff80fd5f1908b 225 SMART SM00862 147 221 5.4E-13 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M892_16930 fd70ae746c31f998a3dff80fd5f1908b 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 221 8.1E-16 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M892_16930 fd70ae746c31f998a3dff80fd5f1908b 225 Gene3D G3DSA:3.40.50.2300 1 122 2.2E-34 T 12-10-2018 M892_16930 fd70ae746c31f998a3dff80fd5f1908b 225 SMART SM00448 2 113 1.6E-36 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_16930 fd70ae746c31f998a3dff80fd5f1908b 225 Gene3D G3DSA:1.10.10.10 123 224 6.1E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_16930 fd70ae746c31f998a3dff80fd5f1908b 225 SUPERFAMILY SSF52172 1 124 3.98E-39 T 12-10-2018 IPR011006 CheY-like superfamily M892_18600 09eaed3e762eb3b6adf5c4e872b42198 503 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 17 304 2.0E-25 T 12-10-2018 IPR018712 Domain of unknown function DUF2235 M892_00405 395484ecde7b448d4afabd9fd1a4b236 648 Pfam PF00990 Diguanylate cyclase, GGDEF domain 488 640 4.6E-28 T 12-10-2018 IPR000160 GGDEF domain M892_00405 395484ecde7b448d4afabd9fd1a4b236 648 Gene3D G3DSA:3.30.70.270 479 643 5.4E-33 T 12-10-2018 M892_00405 395484ecde7b448d4afabd9fd1a4b236 648 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 483 640 9.0E-28 T 12-10-2018 IPR000160 GGDEF domain M892_00405 395484ecde7b448d4afabd9fd1a4b236 648 SUPERFAMILY SSF55073 492 640 3.84E-27 T 12-10-2018 IPR029787 Nucleotide cyclase M892_00405 395484ecde7b448d4afabd9fd1a4b236 648 SMART SM00267 476 647 3.2E-24 T 12-10-2018 IPR000160 GGDEF domain M892_02290 11a41abdb1e60449137723e86502b139 1054 Gene3D G3DSA:3.30.565.10 460 622 2.3E-48 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_02290 11a41abdb1e60449137723e86502b139 1054 SMART SM00448 770 887 3.3E-39 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_02290 11a41abdb1e60449137723e86502b139 1054 SMART SM00448 933 1050 7.8E-39 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_02290 11a41abdb1e60449137723e86502b139 1054 SUPERFAMILY SSF55874 449 619 3.54E-42 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_02290 11a41abdb1e60449137723e86502b139 1054 Gene3D G3DSA:3.40.50.2300 827 899 1.3E-22 T 12-10-2018 M892_02290 11a41abdb1e60449137723e86502b139 1054 Gene3D G3DSA:3.40.50.2300 991 1053 3.3E-22 T 12-10-2018 M892_02290 11a41abdb1e60449137723e86502b139 1054 SUPERFAMILY SSF52172 770 892 2.99E-37 T 12-10-2018 IPR011006 CheY-like superfamily M892_02290 11a41abdb1e60449137723e86502b139 1054 Pfam PF00072 Response regulator receiver domain 772 886 4.0E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_02290 11a41abdb1e60449137723e86502b139 1054 Pfam PF00072 Response regulator receiver domain 935 1050 3.3E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_02290 11a41abdb1e60449137723e86502b139 1054 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 508 620 6.0E-29 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_02290 11a41abdb1e60449137723e86502b139 1054 Gene3D G3DSA:1.10.287.130 356 458 1.0E-29 T 12-10-2018 M892_02290 11a41abdb1e60449137723e86502b139 1054 PRINTS PR00344 Bacterial sensor protein C-terminal signature 548 562 4.8E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_02290 11a41abdb1e60449137723e86502b139 1054 PRINTS PR00344 Bacterial sensor protein C-terminal signature 583 601 4.8E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_02290 11a41abdb1e60449137723e86502b139 1054 PRINTS PR00344 Bacterial sensor protein C-terminal signature 566 576 4.8E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_02290 11a41abdb1e60449137723e86502b139 1054 PRINTS PR00344 Bacterial sensor protein C-terminal signature 607 620 4.8E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_02290 11a41abdb1e60449137723e86502b139 1054 Gene3D G3DSA:3.40.50.12330 761 826 4.7E-20 T 12-10-2018 M892_02290 11a41abdb1e60449137723e86502b139 1054 Gene3D G3DSA:3.40.50.12330 926 990 3.3E-22 T 12-10-2018 M892_02290 11a41abdb1e60449137723e86502b139 1054 SMART SM00387 507 623 3.0E-36 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_02290 11a41abdb1e60449137723e86502b139 1054 SMART SM00388 395 460 4.3E-25 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M892_02290 11a41abdb1e60449137723e86502b139 1054 Pfam PF00512 His Kinase A (phospho-acceptor) domain 395 460 3.1E-20 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M892_02290 11a41abdb1e60449137723e86502b139 1054 SUPERFAMILY SSF52172 932 1053 5.12E-38 T 12-10-2018 IPR011006 CheY-like superfamily M892_02290 11a41abdb1e60449137723e86502b139 1054 SUPERFAMILY SSF47384 383 460 7.85E-21 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M892_08755 896da2a925fc329bd6164326f10cc340 574 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 198 331 4.9E-46 T 12-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 M892_08755 896da2a925fc329bd6164326f10cc340 574 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 6 173 4.4E-58 T 12-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 M892_08755 896da2a925fc329bd6164326f10cc340 574 Gene3D G3DSA:3.40.50.970 1 183 6.2E-73 T 12-10-2018 M892_08755 896da2a925fc329bd6164326f10cc340 574 Gene3D G3DSA:3.40.50.1220 192 362 5.8E-60 T 12-10-2018 M892_08755 896da2a925fc329bd6164326f10cc340 574 SUPERFAMILY SSF52518 373 567 1.11E-68 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold M892_08755 896da2a925fc329bd6164326f10cc340 574 Gene3D G3DSA:3.40.50.970 366 574 2.8E-66 T 12-10-2018 M892_08755 896da2a925fc329bd6164326f10cc340 574 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 396 545 5.4E-51 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 M892_08755 896da2a925fc329bd6164326f10cc340 574 SUPERFAMILY SSF52518 2 181 4.05E-64 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold M892_08755 896da2a925fc329bd6164326f10cc340 574 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 5 569 5.0E-273 T 12-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 M892_08755 896da2a925fc329bd6164326f10cc340 574 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 433 452 - T 12-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 M892_08755 896da2a925fc329bd6164326f10cc340 574 SUPERFAMILY SSF52467 191 364 5.17E-63 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily M892_16170 dd4a1342ef0c66d458c09562012eb6ba 676 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 671 42.716 T 12-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 M892_16170 dd4a1342ef0c66d458c09562012eb6ba 676 Gene3D G3DSA:3.40.50.300 269 415 4.6E-50 T 12-10-2018 M892_16170 dd4a1342ef0c66d458c09562012eb6ba 676 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 5 669 0.0 T 12-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 M892_16170 dd4a1342ef0c66d458c09562012eb6ba 676 SUPERFAMILY SSF46600 625 672 1.7E-10 T 12-10-2018 IPR036876 UVR domain superfamily M892_16170 dd4a1342ef0c66d458c09562012eb6ba 676 SMART SM00487 9 427 1.2E-28 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain M892_16170 dd4a1342ef0c66d458c09562012eb6ba 676 Pfam PF04851 Type III restriction enzyme, res subunit 13 129 9.6E-9 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 M892_16170 dd4a1342ef0c66d458c09562012eb6ba 676 Pfam PF12344 Ultra-violet resistance protein B 553 595 8.0E-20 T 12-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain M892_16170 dd4a1342ef0c66d458c09562012eb6ba 676 Pfam PF00271 Helicase conserved C-terminal domain 440 545 2.2E-17 T 12-10-2018 IPR001650 Helicase, C-terminal M892_16170 dd4a1342ef0c66d458c09562012eb6ba 676 Gene3D G3DSA:3.40.50.300 416 597 1.7E-50 T 12-10-2018 M892_16170 dd4a1342ef0c66d458c09562012eb6ba 676 SUPERFAMILY SSF52540 5 416 3.79E-137 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_16170 dd4a1342ef0c66d458c09562012eb6ba 676 Gene3D G3DSA:3.40.50.300 1 233 1.7E-72 T 12-10-2018 M892_16170 dd4a1342ef0c66d458c09562012eb6ba 676 Pfam PF02151 UvrB/uvrC motif 636 671 5.9E-8 T 12-10-2018 IPR001943 UVR domain GO:0005515 M892_16170 dd4a1342ef0c66d458c09562012eb6ba 676 SUPERFAMILY SSF52540 37 582 7.82E-36 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_16170 dd4a1342ef0c66d458c09562012eb6ba 676 SMART SM00490 461 547 1.2E-19 T 12-10-2018 IPR001650 Helicase, C-terminal M892_16170 dd4a1342ef0c66d458c09562012eb6ba 676 Gene3D G3DSA:4.10.860.10 618 676 2.7E-19 T 12-10-2018 M892_15585 e2d6ee64010bee393a40cd0015f0c593 291 SUPERFAMILY SSF53850 89 287 1.9E-38 T 12-10-2018 M892_15585 e2d6ee64010bee393a40cd0015f0c593 291 SUPERFAMILY SSF46785 1 83 8.74E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_15585 e2d6ee64010bee393a40cd0015f0c593 291 Gene3D G3DSA:3.40.190.290 90 290 1.5E-71 T 12-10-2018 M892_15585 e2d6ee64010bee393a40cd0015f0c593 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 5.1E-13 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_15585 e2d6ee64010bee393a40cd0015f0c593 291 Gene3D G3DSA:1.10.10.10 1 89 1.1E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_15585 e2d6ee64010bee393a40cd0015f0c593 291 Pfam PF03466 LysR substrate binding domain 88 286 1.8E-39 T 12-10-2018 IPR005119 LysR, substrate-binding M892_22680 a8849c9c643f110f1a6cc09f82d1bdec 636 Gene3D G3DSA:3.30.450.40 12 167 1.1E-8 T 12-10-2018 IPR029016 GAF-like domain superfamily M892_22680 a8849c9c643f110f1a6cc09f82d1bdec 636 SUPERFAMILY SSF141868 377 626 2.62E-82 T 12-10-2018 IPR035919 EAL domain superfamily M892_22680 a8849c9c643f110f1a6cc09f82d1bdec 636 SMART SM00267 192 362 4.5E-6 T 12-10-2018 IPR000160 GGDEF domain M892_22680 a8849c9c643f110f1a6cc09f82d1bdec 636 Pfam PF00990 Diguanylate cyclase, GGDEF domain 204 357 2.9E-13 T 12-10-2018 IPR000160 GGDEF domain M892_22680 a8849c9c643f110f1a6cc09f82d1bdec 636 SMART SM00052 372 617 3.6E-93 T 12-10-2018 IPR001633 EAL domain M892_22680 a8849c9c643f110f1a6cc09f82d1bdec 636 Pfam PF00563 EAL domain 380 612 3.5E-66 T 12-10-2018 IPR001633 EAL domain M892_22680 a8849c9c643f110f1a6cc09f82d1bdec 636 Gene3D G3DSA:3.30.70.270 189 361 2.6E-17 T 12-10-2018 M892_22680 a8849c9c643f110f1a6cc09f82d1bdec 636 SUPERFAMILY SSF55781 17 162 5.49E-17 T 12-10-2018 M892_22680 a8849c9c643f110f1a6cc09f82d1bdec 636 Gene3D G3DSA:3.20.20.450 371 628 4.1E-86 T 12-10-2018 IPR035919 EAL domain superfamily M892_22680 a8849c9c643f110f1a6cc09f82d1bdec 636 SUPERFAMILY SSF55073 209 362 5.18E-16 T 12-10-2018 IPR029787 Nucleotide cyclase M892_22680 a8849c9c643f110f1a6cc09f82d1bdec 636 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 202 359 6.1E-13 T 12-10-2018 IPR000160 GGDEF domain M892_12150 86d1349320f9fd5ac18b6a961f9c05b2 401 SUPERFAMILY SSF117892 126 254 8.63E-22 T 12-10-2018 IPR036013 Band 7/SPFH domain superfamily M892_12150 86d1349320f9fd5ac18b6a961f9c05b2 401 TIGRFAM TIGR01933 hflK: HflK protein 91 351 8.2E-122 T 12-10-2018 IPR010201 HflK GO:0016021 M892_12150 86d1349320f9fd5ac18b6a961f9c05b2 401 Pfam PF12221 Bacterial membrane protein N terminal 1 58 5.0E-14 T 12-10-2018 IPR020980 Menbrane protein HflK, N-terminal M892_12150 86d1349320f9fd5ac18b6a961f9c05b2 401 Gene3D G3DSA:3.30.479.30 119 251 1.9E-22 T 12-10-2018 M892_12150 86d1349320f9fd5ac18b6a961f9c05b2 401 Pfam PF01145 SPFH domain / Band 7 family 93 264 5.0E-29 T 12-10-2018 IPR001107 Band 7 domain M892_12150 86d1349320f9fd5ac18b6a961f9c05b2 401 SMART SM00244 89 249 9.6E-52 T 12-10-2018 IPR001107 Band 7 domain M892_12150 86d1349320f9fd5ac18b6a961f9c05b2 401 PRINTS PR00721 Stomatin signature 143 164 2.0E-6 T 12-10-2018 IPR001972 Stomatin family GO:0016020 M892_12150 86d1349320f9fd5ac18b6a961f9c05b2 401 PRINTS PR00721 Stomatin signature 96 118 2.0E-6 T 12-10-2018 IPR001972 Stomatin family GO:0016020 M892_12150 86d1349320f9fd5ac18b6a961f9c05b2 401 PRINTS PR00721 Stomatin signature 199 222 2.0E-6 T 12-10-2018 IPR001972 Stomatin family GO:0016020 M892_24895 744de2a23059fc8768692583ed1a26d9 550 Gene3D G3DSA:3.40.720.10 217 550 5.0E-85 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 M892_24895 744de2a23059fc8768692583ed1a26d9 550 Pfam PF00884 Sulfatase 242 532 2.7E-45 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 M892_24895 744de2a23059fc8768692583ed1a26d9 550 SUPERFAMILY SSF53649 344 539 3.78E-17 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 M892_24895 744de2a23059fc8768692583ed1a26d9 550 Pfam PF08019 Domain of unknown function (DUF1705) 58 211 3.4E-49 T 12-10-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 M892_12515 dd25801fc0c297105c1d8f57db27c9c5 96 Gene3D G3DSA:2.40.50.140 1 96 1.3E-25 T 12-10-2018 M892_12515 dd25801fc0c297105c1d8f57db27c9c5 96 SUPERFAMILY SSF50249 2 95 1.03E-22 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M892_12515 dd25801fc0c297105c1d8f57db27c9c5 96 Pfam PF00436 Single-strand binding protein family 2 84 3.6E-5 T 12-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 M892_12515 dd25801fc0c297105c1d8f57db27c9c5 96 PIRSF PIRSF003135 1 96 1.8E-42 T 12-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 M892_12515 dd25801fc0c297105c1d8f57db27c9c5 96 TIGRFAM TIGR04418 PriB_gamma: primosomal replication protein PriB 2 96 3.7E-29 T 12-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 M892_27080 37e7985ac3d41169b4ad3b1809872fd3 776 Gene3D G3DSA:2.60.40.3110 201 288 5.5E-22 T 12-10-2018 M892_27080 37e7985ac3d41169b4ad3b1809872fd3 776 Pfam PF13954 PapC N-terminal domain 2 119 9.1E-19 T 12-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 M892_27080 37e7985ac3d41169b4ad3b1809872fd3 776 Gene3D G3DSA:2.60.40.2610 606 695 2.4E-12 T 12-10-2018 M892_27080 37e7985ac3d41169b4ad3b1809872fd3 776 Pfam PF00577 Outer membrane usher protein 137 689 1.3E-117 T 12-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 M892_27080 37e7985ac3d41169b4ad3b1809872fd3 776 SUPERFAMILY SSF141729 3 110 6.15E-14 T 12-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 M892_27080 37e7985ac3d41169b4ad3b1809872fd3 776 Gene3D G3DSA:2.60.40.2070 699 773 1.6E-12 T 12-10-2018 M892_27080 37e7985ac3d41169b4ad3b1809872fd3 776 Gene3D G3DSA:3.10.20.410 1 107 4.7E-11 T 12-10-2018 M892_27080 37e7985ac3d41169b4ad3b1809872fd3 776 Pfam PF13953 PapC C-terminal domain 705 755 3.5E-11 T 12-10-2018 IPR025949 PapC-like, C-terminal domain M892_22125 145645322db9ead7ddef8c89bf87bcef 480 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 238 267 4.1E-25 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M892_22125 145645322db9ead7ddef8c89bf87bcef 480 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 344 373 4.1E-25 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M892_22125 145645322db9ead7ddef8c89bf87bcef 480 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 315 342 4.1E-25 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M892_22125 145645322db9ead7ddef8c89bf87bcef 480 SUPERFAMILY SSF58104 169 478 1.7E-66 T 12-10-2018 M892_22125 145645322db9ead7ddef8c89bf87bcef 480 SMART SM00283 217 478 1.1E-50 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M892_22125 145645322db9ead7ddef8c89bf87bcef 480 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 291 443 8.7E-39 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M892_22125 145645322db9ead7ddef8c89bf87bcef 480 Gene3D G3DSA:1.10.287.950 154 480 5.1E-65 T 12-10-2018 M892_00845 38eb628853f378982497307f4cf27031 654 SUPERFAMILY SSF53067 23 216 1.18E-26 T 12-10-2018 M892_00845 38eb628853f378982497307f4cf27031 654 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 27 34 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 M892_00845 38eb628853f378982497307f4cf27031 654 Gene3D G3DSA:3.90.640.10 271 350 9.4E-35 T 12-10-2018 M892_00845 38eb628853f378982497307f4cf27031 654 Pfam PF00012 Hsp70 protein 25 349 2.3E-15 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 M892_00845 38eb628853f378982497307f4cf27031 654 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 235 248 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 M892_00845 38eb628853f378982497307f4cf27031 654 Gene3D G3DSA:3.30.420.40 228 270 9.4E-35 T 12-10-2018 M892_00845 38eb628853f378982497307f4cf27031 654 SUPERFAMILY SSF53067 230 495 3.31E-26 T 12-10-2018 M892_00845 38eb628853f378982497307f4cf27031 654 Gene3D G3DSA:3.30.420.40 25 222 9.4E-35 T 12-10-2018 M892_00845 38eb628853f378982497307f4cf27031 654 PRINTS PR00301 70kDa heat shock protein signature 241 251 5.1E-7 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 M892_00845 38eb628853f378982497307f4cf27031 654 PRINTS PR00301 70kDa heat shock protein signature 23 36 5.1E-7 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 M892_00845 38eb628853f378982497307f4cf27031 654 PRINTS PR00301 70kDa heat shock protein signature 174 194 5.1E-7 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 M892_08835 d73dac41798a772730855773585c6098 126 SUPERFAMILY SSF110069 5 126 5.76E-46 T 12-10-2018 IPR036767 ApaG domain superfamily M892_08835 d73dac41798a772730855773585c6098 126 Gene3D G3DSA:2.60.40.1470 1 126 1.7E-45 T 12-10-2018 IPR036767 ApaG domain superfamily M892_08835 d73dac41798a772730855773585c6098 126 Pfam PF04379 ApaG domain 18 101 1.8E-32 T 12-10-2018 IPR007474 ApaG domain M892_08835 d73dac41798a772730855773585c6098 126 Hamap MF_00791 Protein ApaG [apaG]. 1 126 31.196 T 12-10-2018 IPR023065 Uncharacterised protein family ApaG M892_00890 ee6121515c5b6e2395ee6b5d9486b984 673 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 296 316 1.8E-25 T 12-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 M892_00890 ee6121515c5b6e2395ee6b5d9486b984 673 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 351 362 1.8E-25 T 12-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 M892_00890 ee6121515c5b6e2395ee6b5d9486b984 673 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 330 346 1.8E-25 T 12-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 M892_00890 ee6121515c5b6e2395ee6b5d9486b984 673 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 413 429 1.8E-25 T 12-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 M892_00890 ee6121515c5b6e2395ee6b5d9486b984 673 Gene3D G3DSA:1.10.390.10 344 490 3.0E-46 T 12-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily M892_00890 ee6121515c5b6e2395ee6b5d9486b984 673 Gene3D G3DSA:2.60.120.380 509 606 2.0E-12 T 12-10-2018 M892_00890 ee6121515c5b6e2395ee6b5d9486b984 673 Gene3D G3DSA:3.10.450.40 108 191 2.7E-19 T 12-10-2018 M892_00890 ee6121515c5b6e2395ee6b5d9486b984 673 Pfam PF03413 Peptidase propeptide and YPEB domain 112 186 1.9E-5 T 12-10-2018 IPR025711 PepSY domain M892_00890 ee6121515c5b6e2395ee6b5d9486b984 673 SUPERFAMILY SSF55486 193 487 3.3E-83 T 12-10-2018 M892_00890 ee6121515c5b6e2395ee6b5d9486b984 673 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 342 486 2.7E-34 T 12-10-2018 IPR001570 Peptidase M4, C-terminal GO:0004222 M892_00890 ee6121515c5b6e2395ee6b5d9486b984 673 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 202 339 2.9E-34 T 12-10-2018 IPR013856 Peptidase M4 domain GO:0004222 M892_00890 ee6121515c5b6e2395ee6b5d9486b984 673 Gene3D G3DSA:3.10.170.10 192 343 2.4E-58 T 12-10-2018 M892_13510 b7a6390fc6ce35c0401e231a7efb350b 208 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 130 145 - T 12-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 M892_13510 b7a6390fc6ce35c0401e231a7efb350b 208 Gene3D G3DSA:3.40.50.150 2 206 2.4E-74 T 12-10-2018 M892_13510 b7a6390fc6ce35c0401e231a7efb350b 208 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 5 206 1.6E-81 T 12-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 M892_13510 b7a6390fc6ce35c0401e231a7efb350b 208 SUPERFAMILY SSF53335 14 204 3.38E-45 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M892_13510 b7a6390fc6ce35c0401e231a7efb350b 208 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 7 204 3.0E-70 T 12-10-2018 M892_13510 b7a6390fc6ce35c0401e231a7efb350b 208 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 1 208 38.691 T 12-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 M892_04280 0249f241c24dc7eb0a51214b07fba6f9 446 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 185 406 8.7E-9 T 12-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase M892_04280 0249f241c24dc7eb0a51214b07fba6f9 446 Gene3D G3DSA:3.60.10.10 173 445 9.9E-63 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily M892_04280 0249f241c24dc7eb0a51214b07fba6f9 446 SUPERFAMILY SSF56219 179 444 6.54E-63 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily M892_15200 923c9be1be1fdfab6f1b2333ea736c8e 377 Pfam PF00700 Bacterial flagellin C-terminal helical region 292 376 5.7E-26 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 M892_15200 923c9be1be1fdfab6f1b2333ea736c8e 377 PRINTS PR00207 Flagellin signature 37 54 2.5E-27 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 M892_15200 923c9be1be1fdfab6f1b2333ea736c8e 377 PRINTS PR00207 Flagellin signature 111 134 2.5E-27 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 M892_15200 923c9be1be1fdfab6f1b2333ea736c8e 377 PRINTS PR00207 Flagellin signature 76 95 2.5E-27 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 M892_15200 923c9be1be1fdfab6f1b2333ea736c8e 377 Gene3D G3DSA:1.20.1330.10 44 327 7.2E-76 T 12-10-2018 M892_15200 923c9be1be1fdfab6f1b2333ea736c8e 377 SUPERFAMILY SSF64518 1 376 5.36E-97 T 12-10-2018 M892_15200 923c9be1be1fdfab6f1b2333ea736c8e 377 Pfam PF07196 Flagellin hook IN motif 195 249 3.1E-11 T 12-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 M892_15200 923c9be1be1fdfab6f1b2333ea736c8e 377 Gene3D G3DSA:3.30.70.2120 174 275 7.2E-76 T 12-10-2018 M892_15200 923c9be1be1fdfab6f1b2333ea736c8e 377 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 6.5E-42 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 M892_15200 923c9be1be1fdfab6f1b2333ea736c8e 377 Gene3D G3DSA:1.10.8.410 328 376 1.9E-20 T 12-10-2018 M892_10940 88afceea554658757ec475300daaed86 423 ProSitePatterns PS00216 Sugar transport proteins signature 1. 91 107 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 M892_10940 88afceea554658757ec475300daaed86 423 Gene3D G3DSA:1.20.1720.10 38 411 1.2E-88 T 12-10-2018 M892_10940 88afceea554658757ec475300daaed86 423 SUPERFAMILY SSF103473 35 409 8.76E-59 T 12-10-2018 IPR036259 MFS transporter superfamily M892_10940 88afceea554658757ec475300daaed86 423 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 35 406 1.8E-74 T 12-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 M892_10940 88afceea554658757ec475300daaed86 423 Pfam PF07690 Major Facilitator Superfamily 43 378 5.6E-46 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 M892_12600 e2e7346aedecd9fc589facc842b3db3b 631 SUPERFAMILY SSF52218 94 241 9.43E-46 T 12-10-2018 IPR029039 Flavoprotein-like superfamily M892_12600 e2e7346aedecd9fc589facc842b3db3b 631 Pfam PF00667 FAD binding domain 265 456 5.6E-27 T 12-10-2018 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GO:0016491|GO:0055114 M892_12600 e2e7346aedecd9fc589facc842b3db3b 631 Gene3D G3DSA:1.20.990.10 312 416 1.8E-70 T 12-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 M892_12600 e2e7346aedecd9fc589facc842b3db3b 631 Pfam PF00175 Oxidoreductase NAD-binding domain 489 595 5.0E-19 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 M892_12600 e2e7346aedecd9fc589facc842b3db3b 631 PRINTS PR00369 Flavodoxin signature 144 155 9.9E-10 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 M892_12600 e2e7346aedecd9fc589facc842b3db3b 631 PRINTS PR00369 Flavodoxin signature 200 219 9.9E-10 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 M892_12600 e2e7346aedecd9fc589facc842b3db3b 631 PRINTS PR00369 Flavodoxin signature 96 109 9.9E-10 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 M892_12600 e2e7346aedecd9fc589facc842b3db3b 631 PRINTS PR00369 Flavodoxin signature 176 186 9.9E-10 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 M892_12600 e2e7346aedecd9fc589facc842b3db3b 631 SUPERFAMILY SSF52343 476 631 1.26E-51 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain M892_12600 e2e7346aedecd9fc589facc842b3db3b 631 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 34 631 1.3E-257 T 12-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 M892_12600 e2e7346aedecd9fc589facc842b3db3b 631 Gene3D G3DSA:2.40.30.10 265 471 1.8E-70 T 12-10-2018 M892_12600 e2e7346aedecd9fc589facc842b3db3b 631 Pfam PF00258 Flavodoxin 97 220 4.2E-29 T 12-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 M892_12600 e2e7346aedecd9fc589facc842b3db3b 631 Gene3D G3DSA:3.40.50.360 85 248 2.7E-46 T 12-10-2018 IPR029039 Flavoprotein-like superfamily M892_12600 e2e7346aedecd9fc589facc842b3db3b 631 Gene3D G3DSA:3.40.50.80 477 631 7.0E-60 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain M892_12600 e2e7346aedecd9fc589facc842b3db3b 631 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 513 522 9.2E-29 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 M892_12600 e2e7346aedecd9fc589facc842b3db3b 631 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 302 312 9.2E-29 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 M892_12600 e2e7346aedecd9fc589facc842b3db3b 631 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 451 460 9.2E-29 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 M892_12600 e2e7346aedecd9fc589facc842b3db3b 631 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 526 537 9.2E-29 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 M892_12600 e2e7346aedecd9fc589facc842b3db3b 631 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 557 573 9.2E-29 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 M892_12600 e2e7346aedecd9fc589facc842b3db3b 631 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 488 507 9.2E-29 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 M892_12600 e2e7346aedecd9fc589facc842b3db3b 631 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 580 588 9.2E-29 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 M892_12600 e2e7346aedecd9fc589facc842b3db3b 631 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 418 425 9.2E-29 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 M892_12600 e2e7346aedecd9fc589facc842b3db3b 631 PIRSF PIRSF000207 27 631 2.5E-274 T 12-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 M892_12600 e2e7346aedecd9fc589facc842b3db3b 631 Hamap MF_01541 Sulfite reductase [NADPH] flavoprotein alpha-component [cysJ]. 26 631 48.915 T 12-10-2018 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 M892_12600 e2e7346aedecd9fc589facc842b3db3b 631 SUPERFAMILY SSF63380 262 477 2.67E-60 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel M892_10585 b039773a9e395ff734209bbf338e1e99 211 SUPERFAMILY SSF53335 8 209 2.28E-40 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M892_10585 b039773a9e395ff734209bbf338e1e99 211 Gene3D G3DSA:3.40.50.150 5 210 4.8E-68 T 12-10-2018 M892_10585 b039773a9e395ff734209bbf338e1e99 211 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 16 205 28.678 T 12-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 M892_10585 b039773a9e395ff734209bbf338e1e99 211 Pfam PF02527 rRNA small subunit methyltransferase G 23 204 2.1E-62 T 12-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 M892_10585 b039773a9e395ff734209bbf338e1e99 211 PIRSF PIRSF003078 1 211 9.2E-60 T 12-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 M892_10585 b039773a9e395ff734209bbf338e1e99 211 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 29 207 7.9E-57 T 12-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 M892_14220 9e2161670d610144de1139e4c7e338c7 406 PIRSF PIRSF001491 1 406 6.4E-160 T 12-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 M892_14220 9e2161670d610144de1139e4c7e338c7 406 SUPERFAMILY SSF143856 118 234 5.1E-48 T 12-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 M892_14220 9e2161670d610144de1139e4c7e338c7 406 Gene3D G3DSA:3.40.720.10 3 406 7.4E-149 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 M892_14220 9e2161670d610144de1139e4c7e338c7 406 Hamap MF_00740 Phosphopentomutase [deoB]. 1 406 54.017 T 12-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 M892_14220 9e2161670d610144de1139e4c7e338c7 406 SUPERFAMILY SSF53649 1 406 2.62E-69 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 M892_14220 9e2161670d610144de1139e4c7e338c7 406 Gene3D G3DSA:3.30.70.1250 116 237 7.4E-149 T 12-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 M892_14220 9e2161670d610144de1139e4c7e338c7 406 TIGRFAM TIGR01696 deoB: phosphopentomutase 3 403 3.9E-176 T 12-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 M892_14220 9e2161670d610144de1139e4c7e338c7 406 Pfam PF01676 Metalloenzyme superfamily 2 397 3.0E-42 T 12-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 M892_04635 8819dff177df8b4f928af72b76bb388f 118 Gene3D G3DSA:1.25.40.10 1 117 5.1E-34 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_04635 8819dff177df8b4f928af72b76bb388f 118 Pfam PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) 1 117 1.3E-38 T 12-10-2018 IPR013348 Type III secretion system YscG GO:0009405 M892_04635 8819dff177df8b4f928af72b76bb388f 118 TIGRFAM TIGR02508 type_III_yscG: type III secretion protein, YscG family 1 117 2.7E-40 T 12-10-2018 IPR013348 Type III secretion system YscG GO:0009405 M892_14935 8cb16aa6f3bf34b59032a9238cab4858 190 SMART SM00935 36 190 3.2E-43 T 12-10-2018 IPR005632 Chaperone protein Skp GO:0051082 M892_14935 8cb16aa6f3bf34b59032a9238cab4858 190 Gene3D G3DSA:3.30.910.20 46 190 2.4E-34 T 12-10-2018 IPR024930 Skp domain superfamily M892_14935 8cb16aa6f3bf34b59032a9238cab4858 190 Pfam PF03938 Outer membrane protein (OmpH-like) 34 189 6.1E-27 T 12-10-2018 IPR005632 Chaperone protein Skp GO:0051082 M892_14935 8cb16aa6f3bf34b59032a9238cab4858 190 SUPERFAMILY SSF111384 47 190 8.76E-31 T 12-10-2018 M892_14935 8cb16aa6f3bf34b59032a9238cab4858 190 PIRSF PIRSF002094 22 190 9.3E-40 T 12-10-2018 IPR005632 Chaperone protein Skp GO:0051082 M892_13860 dc0d69dba4d3d6eb0e2ef11c1b9141c5 148 Gene3D G3DSA:1.20.120.910 17 147 1.2E-35 T 12-10-2018 M892_13860 dc0d69dba4d3d6eb0e2ef11c1b9141c5 148 SUPERFAMILY SSF109635 8 106 6.8E-37 T 12-10-2018 IPR037187 DksA, N-terminal domain superfamily M892_13860 dc0d69dba4d3d6eb0e2ef11c1b9141c5 148 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 25 147 29.508 T 12-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 M892_13860 dc0d69dba4d3d6eb0e2ef11c1b9141c5 148 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 108 140 4.4E-10 T 12-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 M892_13860 dc0d69dba4d3d6eb0e2ef11c1b9141c5 148 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 111 135 - T 12-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site M892_13860 dc0d69dba4d3d6eb0e2ef11c1b9141c5 148 SUPERFAMILY SSF57716 108 146 6.41E-10 T 12-10-2018 M892_13860 dc0d69dba4d3d6eb0e2ef11c1b9141c5 148 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 29 137 5.9E-51 T 12-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 M892_13860 dc0d69dba4d3d6eb0e2ef11c1b9141c5 148 PRINTS PR00618 DksA/TraR zinc finger signature 111 122 8.9E-5 T 12-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria M892_13860 dc0d69dba4d3d6eb0e2ef11c1b9141c5 148 PRINTS PR00618 DksA/TraR zinc finger signature 123 135 8.9E-5 T 12-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria M892_26235 64f70ffedd816525fa8eaaf37106fe5f 309 SUPERFAMILY SSF53850 95 301 5.61E-39 T 12-10-2018 M892_26235 64f70ffedd816525fa8eaaf37106fe5f 309 Gene3D G3DSA:3.40.190.10 169 270 9.8E-59 T 12-10-2018 M892_26235 64f70ffedd816525fa8eaaf37106fe5f 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 3.7E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_26235 64f70ffedd816525fa8eaaf37106fe5f 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 3.7E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_26235 64f70ffedd816525fa8eaaf37106fe5f 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 3.7E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_26235 64f70ffedd816525fa8eaaf37106fe5f 309 Gene3D G3DSA:3.40.190.10 98 298 9.8E-59 T 12-10-2018 M892_26235 64f70ffedd816525fa8eaaf37106fe5f 309 SUPERFAMILY SSF46785 10 116 1.59E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_26235 64f70ffedd816525fa8eaaf37106fe5f 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 69 1.1E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_26235 64f70ffedd816525fa8eaaf37106fe5f 309 Pfam PF03466 LysR substrate binding domain 94 301 3.0E-38 T 12-10-2018 IPR005119 LysR, substrate-binding M892_26235 64f70ffedd816525fa8eaaf37106fe5f 309 Gene3D G3DSA:1.10.10.10 9 95 2.1E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_22745 748ffa22a260adbfdc9093e01f8288a5 295 Pfam PF03466 LysR substrate binding domain 123 291 4.8E-14 T 12-10-2018 IPR005119 LysR, substrate-binding M892_22745 748ffa22a260adbfdc9093e01f8288a5 295 Gene3D G3DSA:3.40.190.10 136 276 1.2E-9 T 12-10-2018 M892_22745 748ffa22a260adbfdc9093e01f8288a5 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 1.4E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_22745 748ffa22a260adbfdc9093e01f8288a5 295 Gene3D G3DSA:3.40.190.10 169 264 1.2E-9 T 12-10-2018 M892_22745 748ffa22a260adbfdc9093e01f8288a5 295 SUPERFAMILY SSF53850 115 289 2.64E-18 T 12-10-2018 M892_22745 748ffa22a260adbfdc9093e01f8288a5 295 SUPERFAMILY SSF46785 5 84 9.07E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_22745 748ffa22a260adbfdc9093e01f8288a5 295 Gene3D G3DSA:1.10.10.10 5 90 4.4E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_21645 9430ac25034bb99c7724c91d2e9ca16c 230 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 2 72 4.5E-8 T 12-10-2018 IPR000477 Reverse transcriptase domain M892_21645 9430ac25034bb99c7724c91d2e9ca16c 230 Pfam PF08388 Group II intron, maturase-specific domain 88 156 5.4E-15 T 12-10-2018 IPR013597 Group II intron, maturase-specific M892_21645 9430ac25034bb99c7724c91d2e9ca16c 230 SUPERFAMILY SSF56672 5 159 3.45E-13 T 12-10-2018 M892_19180 87c7f27f0d8d353f9c5ef55fd3d80d29 309 SUPERFAMILY SSF53850 89 296 2.95E-39 T 12-10-2018 M892_19180 87c7f27f0d8d353f9c5ef55fd3d80d29 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 2.2E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_19180 87c7f27f0d8d353f9c5ef55fd3d80d29 309 SUPERFAMILY SSF46785 4 112 3.23E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_19180 87c7f27f0d8d353f9c5ef55fd3d80d29 309 Gene3D G3DSA:1.10.10.10 1 90 5.3E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_19180 87c7f27f0d8d353f9c5ef55fd3d80d29 309 Gene3D G3DSA:3.40.190.290 91 293 1.2E-56 T 12-10-2018 M892_19180 87c7f27f0d8d353f9c5ef55fd3d80d29 309 Pfam PF03466 LysR substrate binding domain 88 294 2.3E-39 T 12-10-2018 IPR005119 LysR, substrate-binding M892_19180 87c7f27f0d8d353f9c5ef55fd3d80d29 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.1E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_19180 87c7f27f0d8d353f9c5ef55fd3d80d29 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.1E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_19180 87c7f27f0d8d353f9c5ef55fd3d80d29 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.1E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_11750 bef79ba9fd0ded6089a3cab637a9a6e6 447 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 5.3E-43 T 12-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 M892_11750 bef79ba9fd0ded6089a3cab637a9a6e6 447 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 445 2.6E-244 T 12-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 M892_11750 bef79ba9fd0ded6089a3cab637a9a6e6 447 SUPERFAMILY SSF51246 331 444 8.37E-43 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 M892_11750 bef79ba9fd0ded6089a3cab637a9a6e6 447 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 M892_11750 bef79ba9fd0ded6089a3cab637a9a6e6 447 SMART SM00878 336 441 1.1E-63 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 M892_11750 bef79ba9fd0ded6089a3cab637a9a6e6 447 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 8.2E-38 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 M892_11750 bef79ba9fd0ded6089a3cab637a9a6e6 447 Gene3D G3DSA:3.30.470.20 86 433 1.8E-157 T 12-10-2018 M892_11750 bef79ba9fd0ded6089a3cab637a9a6e6 447 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 1.9E-84 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 M892_11750 bef79ba9fd0ded6089a3cab637a9a6e6 447 SUPERFAMILY SSF52440 1 113 7.91E-46 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily M892_11750 bef79ba9fd0ded6089a3cab637a9a6e6 447 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 M892_11750 bef79ba9fd0ded6089a3cab637a9a6e6 447 SUPERFAMILY SSF56059 83 346 1.2E-71 T 12-10-2018 M892_11750 bef79ba9fd0ded6089a3cab637a9a6e6 447 Gene3D G3DSA:3.40.50.20 1 85 8.3E-34 T 12-10-2018 M892_11750 bef79ba9fd0ded6089a3cab637a9a6e6 447 Gene3D G3DSA:3.30.1490.20 131 203 1.8E-157 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 M892_08815 6f54790b2a40bab2cebb3978a8a252b0 781 Gene3D G3DSA:2.60.450.10 50 98 1.9E-5 T 12-10-2018 M892_08815 6f54790b2a40bab2cebb3978a8a252b0 781 Pfam PF03968 OstA-like protein 58 189 3.8E-17 T 12-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal M892_08815 6f54790b2a40bab2cebb3978a8a252b0 781 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 4 753 20.303 T 12-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 M892_08815 6f54790b2a40bab2cebb3978a8a252b0 781 Pfam PF04453 Organic solvent tolerance protein 297 682 1.8E-111 T 12-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 M892_24445 4d4ec547bc478cf003e42d415c150446 152 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 4 109 1.1E-25 T 12-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain M892_24445 4d4ec547bc478cf003e42d415c150446 152 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 67 99 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 M892_24445 4d4ec547bc478cf003e42d415c150446 152 Gene3D G3DSA:3.40.140.10 2 151 7.1E-41 T 12-10-2018 M892_24445 4d4ec547bc478cf003e42d415c150446 152 SUPERFAMILY SSF53927 8 146 6.02E-32 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 M892_24445 4d4ec547bc478cf003e42d415c150446 152 PIRSF PIRSF006019 1 148 7.0E-45 T 12-10-2018 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210|Reactome: R-HSA-499943 M892_13910 584ac63de50133fc075402ae1ece08f1 409 TIGRFAM TIGR03644 marine_trans_1: probable ammonium transporter, marine subtype 12 405 2.8E-206 T 12-10-2018 IPR019879 Ammonium transporter, marine subtype M892_13910 584ac63de50133fc075402ae1ece08f1 409 Pfam PF00909 Ammonium Transporter Family 18 402 1.0E-99 T 12-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 M892_13910 584ac63de50133fc075402ae1ece08f1 409 Gene3D G3DSA:1.10.3430.10 2 408 1.1E-118 T 12-10-2018 IPR029020 Ammonium/urea transporter M892_13910 584ac63de50133fc075402ae1ece08f1 409 ProSitePatterns PS01219 Ammonium transporters signature. 163 188 - T 12-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 M892_13910 584ac63de50133fc075402ae1ece08f1 409 SUPERFAMILY SSF111352 12 383 4.45E-105 T 12-10-2018 M892_13935 c58193a01096ba37d9e8a309e606ee24 802 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 296 728 2.5E-209 T 12-10-2018 IPR033432 Glycosyl hydrolase 36, catalytic domain M892_13935 c58193a01096ba37d9e8a309e606ee24 802 Gene3D G3DSA:1.50.10.10 311 720 1.3E-134 T 12-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 M892_13935 c58193a01096ba37d9e8a309e606ee24 802 Gene3D G3DSA:2.70.98.40 1 302 1.4E-115 T 12-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily M892_13935 c58193a01096ba37d9e8a309e606ee24 802 Gene3D G3DSA:2.60.420.10 721 801 9.9E-30 T 12-10-2018 M892_13935 c58193a01096ba37d9e8a309e606ee24 802 Pfam PF06165 Glycosyltransferase family 36 21 267 2.1E-84 T 12-10-2018 IPR010383 Glycosyl hydrolase 94 M892_13935 c58193a01096ba37d9e8a309e606ee24 802 SMART SM01068 1 63 2.3E-20 T 12-10-2018 IPR009342 Putative carbohydrate binding domain M892_13935 c58193a01096ba37d9e8a309e606ee24 802 SUPERFAMILY SSF74650 1 269 1.57E-82 T 12-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 M892_13935 c58193a01096ba37d9e8a309e606ee24 802 SUPERFAMILY SSF48208 274 801 2.52E-108 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 M892_22730 6f3a924a6824a1fe580030e7ef8da19f 338 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 334 1.2E-141 T 12-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 M892_22730 6f3a924a6824a1fe580030e7ef8da19f 338 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 323 1.5E-60 T 12-10-2018 IPR016040 NAD(P)-binding domain M892_22730 6f3a924a6824a1fe580030e7ef8da19f 338 Gene3D G3DSA:3.40.50.720 3 273 2.1E-140 T 12-10-2018 M892_22730 6f3a924a6824a1fe580030e7ef8da19f 338 PRINTS PR01713 Nucleotide sugar epimerase signature 294 311 2.0E-5 T 12-10-2018 M892_22730 6f3a924a6824a1fe580030e7ef8da19f 338 PRINTS PR01713 Nucleotide sugar epimerase signature 230 245 2.0E-5 T 12-10-2018 M892_22730 6f3a924a6824a1fe580030e7ef8da19f 338 PRINTS PR01713 Nucleotide sugar epimerase signature 255 270 2.0E-5 T 12-10-2018 M892_22730 6f3a924a6824a1fe580030e7ef8da19f 338 SUPERFAMILY SSF51735 1 335 8.83E-99 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_22730 6f3a924a6824a1fe580030e7ef8da19f 338 Gene3D G3DSA:3.90.25.10 193 328 2.1E-140 T 12-10-2018 M892_13770 6f845aa25c64b96f346ae3899704d114 887 SUPERFAMILY SSF52518 56 469 5.21E-139 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold M892_13770 6f845aa25c64b96f346ae3899704d114 887 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 4 886 0.0 T 12-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 M892_13770 6f845aa25c64b96f346ae3899704d114 887 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 103 298 1.5E-9 T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 M892_13770 6f845aa25c64b96f346ae3899704d114 887 Gene3D G3DSA:3.40.50.920 707 887 8.1E-70 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 M892_13770 6f845aa25c64b96f346ae3899704d114 887 PIRSF PIRSF000156 1 887 0.0 T 12-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 M892_13770 6f845aa25c64b96f346ae3899704d114 887 SUPERFAMILY SSF52922 702 886 2.26E-58 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 M892_13770 6f845aa25c64b96f346ae3899704d114 887 SUPERFAMILY SSF52518 474 701 1.41E-96 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold M892_13770 6f845aa25c64b96f346ae3899704d114 887 Gene3D G3DSA:3.40.50.970 55 471 7.1E-131 T 12-10-2018 M892_13770 6f845aa25c64b96f346ae3899704d114 887 Gene3D G3DSA:3.40.50.970 472 706 2.8E-110 T 12-10-2018 M892_09645 96fdf199fc340d27bf25f7cf8c873b22 347 Gene3D G3DSA:1.10.3720.10 133 339 1.9E-18 T 12-10-2018 IPR035906 MetI-like superfamily M892_09645 96fdf199fc340d27bf25f7cf8c873b22 347 SUPERFAMILY SSF161098 139 325 7.98E-20 T 12-10-2018 IPR035906 MetI-like superfamily M892_09645 96fdf199fc340d27bf25f7cf8c873b22 347 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 161 341 7.6E-28 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M892_03925 9bf7062933c810874a0a9a3a3a8f502e 78 TIGRFAM TIGR02647 DNA: TIGR02647 family protein 1 77 6.8E-42 T 12-10-2018 IPR013468 Conserved hypothetical protein CHP02647 M892_03925 9bf7062933c810874a0a9a3a3a8f502e 78 Pfam PF06146 Phosphate-starvation-inducible E 8 68 6.8E-10 T 12-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like M892_01425 bce587ca27ca5bf78bc52903e1262ad9 239 SUPERFAMILY SSF48008 88 223 2.07E-24 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal M892_01425 bce587ca27ca5bf78bc52903e1262ad9 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 82 3.6E-16 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M892_01425 bce587ca27ca5bf78bc52903e1262ad9 239 SMART SM00345 24 82 5.5E-15 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M892_01425 bce587ca27ca5bf78bc52903e1262ad9 239 Gene3D G3DSA:1.20.120.530 80 230 6.1E-29 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal M892_01425 bce587ca27ca5bf78bc52903e1262ad9 239 Pfam PF07729 FCD domain 92 217 3.6E-26 T 12-10-2018 IPR011711 GntR, C-terminal M892_01425 bce587ca27ca5bf78bc52903e1262ad9 239 SMART SM00895 92 219 1.9E-23 T 12-10-2018 IPR011711 GntR, C-terminal M892_01425 bce587ca27ca5bf78bc52903e1262ad9 239 SUPERFAMILY SSF46785 18 111 3.16E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_01425 bce587ca27ca5bf78bc52903e1262ad9 239 Gene3D G3DSA:1.10.10.10 3 79 2.1E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_16080 af67333debddf17c8b084c7b29236425 404 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 202 370 7.4E-38 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M892_16080 af67333debddf17c8b084c7b29236425 404 Gene3D G3DSA:1.10.287.950 67 404 1.8E-60 T 12-10-2018 M892_16080 af67333debddf17c8b084c7b29236425 404 SMART SM00283 142 403 9.2E-53 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M892_16080 af67333debddf17c8b084c7b29236425 404 SUPERFAMILY SSF58104 100 402 1.09E-60 T 12-10-2018 M892_25075 c82c24873891928101b249e832d95974 167 Gene3D G3DSA:3.40.1570.10 1 167 6.6E-60 T 12-10-2018 M892_25075 c82c24873891928101b249e832d95974 167 Pfam PF06228 Haem utilisation ChuX/HutX 24 161 8.2E-33 T 12-10-2018 IPR010413 Heme utilization carrier protein HutX-like M892_25075 c82c24873891928101b249e832d95974 167 TIGRFAM TIGR04108 HutX: putative heme utilization carrier protein HutX 8 161 3.6E-62 T 12-10-2018 IPR010413 Heme utilization carrier protein HutX-like M892_25075 c82c24873891928101b249e832d95974 167 PIRSF PIRSF030840 1 167 6.3E-63 T 12-10-2018 IPR010413 Heme utilization carrier protein HutX-like M892_25075 c82c24873891928101b249e832d95974 167 SUPERFAMILY SSF144064 1 163 3.79E-56 T 12-10-2018 M892_05120 99b44bd81555c09b06725c04fdea1c7a 334 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 334 182.409 T 12-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 M892_05120 99b44bd81555c09b06725c04fdea1c7a 334 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 258 331 1.9E-33 T 12-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 M892_05120 99b44bd81555c09b06725c04fdea1c7a 334 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 16 240 3.9E-117 T 12-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 M892_05120 99b44bd81555c09b06725c04fdea1c7a 334 Gene3D G3DSA:1.10.10.10 262 334 4.3E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_05120 99b44bd81555c09b06725c04fdea1c7a 334 SMART SM00382 56 183 4.0E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_05120 99b44bd81555c09b06725c04fdea1c7a 334 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 28 331 4.9E-147 T 12-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 M892_05120 99b44bd81555c09b06725c04fdea1c7a 334 SUPERFAMILY SSF52540 25 256 1.34E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_05120 99b44bd81555c09b06725c04fdea1c7a 334 Gene3D G3DSA:3.40.50.300 25 186 7.8E-41 T 12-10-2018 M892_05120 99b44bd81555c09b06725c04fdea1c7a 334 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 255 332 1.0E-38 T 12-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 M892_05120 99b44bd81555c09b06725c04fdea1c7a 334 Gene3D G3DSA:1.10.8.60 187 260 5.4E-31 T 12-10-2018 M892_05120 99b44bd81555c09b06725c04fdea1c7a 334 SUPERFAMILY SSF46785 262 332 2.5E-25 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_06235 69fedecf31a8700497ff57836dc02f36 290 SUPERFAMILY SSF51735 1 122 1.46E-42 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_06235 69fedecf31a8700497ff57836dc02f36 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 12-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site M892_06235 69fedecf31a8700497ff57836dc02f36 290 PIRSF PIRSF001553 1 289 3.4E-134 T 12-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 M892_06235 69fedecf31a8700497ff57836dc02f36 290 Pfam PF00549 CoA-ligase 151 271 3.4E-22 T 12-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 M892_06235 69fedecf31a8700497ff57836dc02f36 290 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 2.0E-40 T 12-10-2018 M892_06235 69fedecf31a8700497ff57836dc02f36 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 2.0E-40 T 12-10-2018 M892_06235 69fedecf31a8700497ff57836dc02f36 290 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 2.0E-40 T 12-10-2018 M892_06235 69fedecf31a8700497ff57836dc02f36 290 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 2.0E-40 T 12-10-2018 M892_06235 69fedecf31a8700497ff57836dc02f36 290 Gene3D G3DSA:3.40.50.720 1 123 4.3E-51 T 12-10-2018 M892_06235 69fedecf31a8700497ff57836dc02f36 290 Pfam PF02629 CoA binding domain 6 99 6.0E-31 T 12-10-2018 IPR003781 CoA-binding GO:0048037 M892_06235 69fedecf31a8700497ff57836dc02f36 290 SUPERFAMILY SSF52210 123 285 1.19E-55 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 M892_06235 69fedecf31a8700497ff57836dc02f36 290 Gene3D G3DSA:3.40.50.261 124 288 6.4E-76 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 M892_06235 69fedecf31a8700497ff57836dc02f36 290 SMART SM00881 4 100 1.1E-35 T 12-10-2018 IPR003781 CoA-binding GO:0048037 M892_06235 69fedecf31a8700497ff57836dc02f36 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 287 6.5E-146 T 12-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 M892_06235 69fedecf31a8700497ff57836dc02f36 290 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 43.428 T 12-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 M892_06235 69fedecf31a8700497ff57836dc02f36 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 12-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site M892_07875 9076816779650906c6f12af1a26df8b9 857 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 12-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 M892_07875 9076816779650906c6f12af1a26df8b9 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 4.5E-11 T 12-10-2018 IPR004176 Clp, N-terminal M892_07875 9076816779650906c6f12af1a26df8b9 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 3.5E-14 T 12-10-2018 IPR004176 Clp, N-terminal M892_07875 9076816779650906c6f12af1a26df8b9 857 SUPERFAMILY SSF52540 546 853 1.88E-84 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_07875 9076816779650906c6f12af1a26df8b9 857 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 845 1.6E-27 T 12-10-2018 IPR019489 Clp ATPase, C-terminal M892_07875 9076816779650906c6f12af1a26df8b9 857 SMART SM01086 766 855 1.5E-36 T 12-10-2018 IPR019489 Clp ATPase, C-terminal M892_07875 9076816779650906c6f12af1a26df8b9 857 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 854 0.0 T 12-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 M892_07875 9076816779650906c6f12af1a26df8b9 857 Gene3D G3DSA:1.10.8.60 766 857 2.4E-27 T 12-10-2018 M892_07875 9076816779650906c6f12af1a26df8b9 857 SUPERFAMILY SSF52540 159 545 2.0E-100 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_07875 9076816779650906c6f12af1a26df8b9 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 4.3E-42 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 M892_07875 9076816779650906c6f12af1a26df8b9 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 4.3E-42 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 M892_07875 9076816779650906c6f12af1a26df8b9 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 4.3E-42 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 M892_07875 9076816779650906c6f12af1a26df8b9 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 4.3E-42 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 M892_07875 9076816779650906c6f12af1a26df8b9 857 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 204 320 2.4E-13 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 M892_07875 9076816779650906c6f12af1a26df8b9 857 Gene3D G3DSA:3.40.50.300 158 347 1.2E-74 T 12-10-2018 M892_07875 9076816779650906c6f12af1a26df8b9 857 Gene3D G3DSA:3.40.50.300 550 764 3.8E-89 T 12-10-2018 M892_07875 9076816779650906c6f12af1a26df8b9 857 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 759 7.2E-57 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 M892_07875 9076816779650906c6f12af1a26df8b9 857 SMART SM00382 198 344 3.3E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_07875 9076816779650906c6f12af1a26df8b9 857 SMART SM00382 597 763 2.0E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_07875 9076816779650906c6f12af1a26df8b9 857 SUPERFAMILY SSF81923 4 156 1.2E-42 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 M892_07875 9076816779650906c6f12af1a26df8b9 857 Gene3D G3DSA:3.40.50.300 348 544 1.3E-66 T 12-10-2018 M892_07875 9076816779650906c6f12af1a26df8b9 857 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 12-10-2018 IPR028299 ClpA/B, conserved site 2 M892_07875 9076816779650906c6f12af1a26df8b9 857 Gene3D G3DSA:1.10.1780.10 1 148 1.3E-32 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 M892_14440 b438b64378da8f57a4be9262fced8c97 336 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 324 3.5E-56 T 12-10-2018 IPR016040 NAD(P)-binding domain M892_14440 b438b64378da8f57a4be9262fced8c97 336 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 335 8.0E-140 T 12-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 M892_14440 b438b64378da8f57a4be9262fced8c97 336 Gene3D G3DSA:3.90.25.10 194 329 2.9E-143 T 12-10-2018 M892_14440 b438b64378da8f57a4be9262fced8c97 336 Gene3D G3DSA:3.40.50.720 3 274 2.9E-143 T 12-10-2018 M892_14440 b438b64378da8f57a4be9262fced8c97 336 SUPERFAMILY SSF51735 2 335 1.45E-96 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_14440 b438b64378da8f57a4be9262fced8c97 336 PRINTS PR01713 Nucleotide sugar epimerase signature 256 271 1.2E-5 T 12-10-2018 M892_14440 b438b64378da8f57a4be9262fced8c97 336 PRINTS PR01713 Nucleotide sugar epimerase signature 231 246 1.2E-5 T 12-10-2018 M892_14440 b438b64378da8f57a4be9262fced8c97 336 PRINTS PR01713 Nucleotide sugar epimerase signature 295 312 1.2E-5 T 12-10-2018 M892_11050 4017c0dd6aaddcfbb1abfd9fdab5fbe3 89 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 9 78 4.3E-14 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 M892_11050 4017c0dd6aaddcfbb1abfd9fdab5fbe3 89 SUPERFAMILY SSF54292 1 87 9.04E-26 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 M892_11050 4017c0dd6aaddcfbb1abfd9fdab5fbe3 89 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 M892_11050 4017c0dd6aaddcfbb1abfd9fdab5fbe3 89 Gene3D G3DSA:3.10.20.30 1 89 4.3E-23 T 12-10-2018 IPR012675 Beta-grasp domain superfamily M892_21840 8432b5911897e8716830036c9eaa0589 702 SUPERFAMILY SSF63825 29 229 6.67E-16 T 12-10-2018 M892_21840 8432b5911897e8716830036c9eaa0589 702 Gene3D G3DSA:2.130.10.10 109 267 1.4E-5 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 M892_21840 8432b5911897e8716830036c9eaa0589 702 Pfam PF14339 Domain of unknown function (DUF4394) 138 210 1.1E-5 T 12-10-2018 IPR025507 Domain of unknown function DUF4394 M892_21840 8432b5911897e8716830036c9eaa0589 702 TIGRFAM TIGR04456 LruC_dom: LruC domain 439 691 1.6E-80 T 12-10-2018 IPR031025 LruC domain M892_21840 8432b5911897e8716830036c9eaa0589 702 Pfam PF16130 Domain of unknown function (DUF4842) 472 690 2.2E-57 T 12-10-2018 IPR032295 Domain of unknown function DUF4842 M892_21135 a7ab4018f3773d94e93227175a68d284 263 Gene3D G3DSA:3.30.479.30 47 178 1.7E-48 T 12-10-2018 M892_21135 a7ab4018f3773d94e93227175a68d284 263 SMART SM00244 19 176 5.1E-63 T 12-10-2018 IPR001107 Band 7 domain M892_21135 a7ab4018f3773d94e93227175a68d284 263 PRINTS PR00721 Stomatin signature 26 48 4.6E-63 T 12-10-2018 IPR001972 Stomatin family GO:0016020 M892_21135 a7ab4018f3773d94e93227175a68d284 263 PRINTS PR00721 Stomatin signature 108 125 4.6E-63 T 12-10-2018 IPR001972 Stomatin family GO:0016020 M892_21135 a7ab4018f3773d94e93227175a68d284 263 PRINTS PR00721 Stomatin signature 73 94 4.6E-63 T 12-10-2018 IPR001972 Stomatin family GO:0016020 M892_21135 a7ab4018f3773d94e93227175a68d284 263 PRINTS PR00721 Stomatin signature 152 170 4.6E-63 T 12-10-2018 IPR001972 Stomatin family GO:0016020 M892_21135 a7ab4018f3773d94e93227175a68d284 263 PRINTS PR00721 Stomatin signature 171 192 4.6E-63 T 12-10-2018 IPR001972 Stomatin family GO:0016020 M892_21135 a7ab4018f3773d94e93227175a68d284 263 PRINTS PR00721 Stomatin signature 196 219 4.6E-63 T 12-10-2018 IPR001972 Stomatin family GO:0016020 M892_21135 a7ab4018f3773d94e93227175a68d284 263 PRINTS PR00721 Stomatin signature 128 151 4.6E-63 T 12-10-2018 IPR001972 Stomatin family GO:0016020 M892_21135 a7ab4018f3773d94e93227175a68d284 263 SUPERFAMILY SSF117892 50 183 6.54E-43 T 12-10-2018 IPR036013 Band 7/SPFH domain superfamily M892_21135 a7ab4018f3773d94e93227175a68d284 263 Pfam PF01145 SPFH domain / Band 7 family 24 192 1.6E-35 T 12-10-2018 IPR001107 Band 7 domain M892_08190 6f315585dc64c98d08ca1cacbdf161f8 125 ProSitePatterns PS00850 Glycine radical domain signature. 95 103 - T 12-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site M892_08190 6f315585dc64c98d08ca1cacbdf161f8 125 PIRSF PIRSF000378 2 125 1.5E-53 T 12-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA M892_08190 6f315585dc64c98d08ca1cacbdf161f8 125 TIGRFAM TIGR04365 spare_glycyl: autonomous glycyl radical cofactor GrcA 2 125 1.9E-68 T 12-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA M892_08190 6f315585dc64c98d08ca1cacbdf161f8 125 SUPERFAMILY SSF51998 64 124 1.51E-23 T 12-10-2018 M892_08190 6f315585dc64c98d08ca1cacbdf161f8 125 Gene3D G3DSA:3.20.70.20 53 125 2.8E-25 T 12-10-2018 M892_08190 6f315585dc64c98d08ca1cacbdf161f8 125 Pfam PF01228 Glycine radical 15 106 4.5E-23 T 12-10-2018 IPR001150 Glycine radical domain GO:0003824 M892_08190 6f315585dc64c98d08ca1cacbdf161f8 125 Hamap MF_00806 Autonomous glycyl radical cofactor [grcA]. 1 125 40.901 T 12-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA M892_18980 684a0c87c255a72c7ee36c8570559686 452 SUPERFAMILY SSF55073 299 451 2.67E-42 T 12-10-2018 IPR029787 Nucleotide cyclase M892_18980 684a0c87c255a72c7ee36c8570559686 452 SMART SM00267 283 450 1.8E-45 T 12-10-2018 IPR000160 GGDEF domain M892_18980 684a0c87c255a72c7ee36c8570559686 452 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 292 451 8.9E-47 T 12-10-2018 IPR000160 GGDEF domain M892_18980 684a0c87c255a72c7ee36c8570559686 452 Gene3D G3DSA:3.30.70.270 290 452 6.7E-49 T 12-10-2018 M892_18980 684a0c87c255a72c7ee36c8570559686 452 Pfam PF03924 CHASE domain 110 214 6.2E-16 T 12-10-2018 IPR006189 CHASE domain M892_18980 684a0c87c255a72c7ee36c8570559686 452 SMART SM01079 47 223 5.1E-29 T 12-10-2018 IPR006189 CHASE domain M892_18980 684a0c87c255a72c7ee36c8570559686 452 Pfam PF00990 Diguanylate cyclase, GGDEF domain 294 451 6.9E-44 T 12-10-2018 IPR000160 GGDEF domain M892_00070 408ad007575f93d3a759887b0e72df82 484 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 13 484 2.4E-155 T 12-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 M892_00070 408ad007575f93d3a759887b0e72df82 484 Gene3D G3DSA:3.30.870.10 116 309 1.1E-37 T 12-10-2018 M892_00070 408ad007575f93d3a759887b0e72df82 484 Hamap MF_00190 Cardiolipin synthase A [clsA]. 2 484 49.586 T 12-10-2018 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 M892_00070 408ad007575f93d3a759887b0e72df82 484 Pfam PF13091 PLD-like domain 327 447 3.4E-24 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 M892_00070 408ad007575f93d3a759887b0e72df82 484 Pfam PF13091 PLD-like domain 134 268 8.2E-17 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 M892_00070 408ad007575f93d3a759887b0e72df82 484 Pfam PF13396 Phospholipase_D-nuclease N-terminal 23 59 9.0E-7 T 12-10-2018 IPR027379 Cardiolipin synthase N-terminal M892_00070 408ad007575f93d3a759887b0e72df82 484 SMART SM00155 397 424 6.0E-6 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 M892_00070 408ad007575f93d3a759887b0e72df82 484 SMART SM00155 219 246 4.0E-6 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 M892_00070 408ad007575f93d3a759887b0e72df82 484 SUPERFAMILY SSF56024 69 313 2.94E-50 T 12-10-2018 M892_00070 408ad007575f93d3a759887b0e72df82 484 SUPERFAMILY SSF56024 273 469 2.24E-45 T 12-10-2018 M892_00070 408ad007575f93d3a759887b0e72df82 484 Gene3D G3DSA:3.30.870.10 315 459 4.3E-24 T 12-10-2018 M892_12975 3725dda57bbf985a5c787108e3047ba9 406 Pfam PF02274 Amidinotransferase 18 403 3.9E-111 T 12-10-2018 M892_12975 3725dda57bbf985a5c787108e3047ba9 406 PIRSF PIRSF006356 1 406 1.4E-157 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 M892_12975 3725dda57bbf985a5c787108e3047ba9 406 SUPERFAMILY SSF55909 1 406 3.14E-128 T 12-10-2018 M892_12975 3725dda57bbf985a5c787108e3047ba9 406 Gene3D G3DSA:1.10.3930.10 68 148 9.5E-148 T 12-10-2018 M892_12975 3725dda57bbf985a5c787108e3047ba9 406 Gene3D G3DSA:3.75.10.10 6 403 9.5E-148 T 12-10-2018 M892_12975 3725dda57bbf985a5c787108e3047ba9 406 PRINTS PR01466 Bacterial arginine deiminase signature 177 192 2.8E-44 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 M892_12975 3725dda57bbf985a5c787108e3047ba9 406 PRINTS PR01466 Bacterial arginine deiminase signature 149 167 2.8E-44 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 M892_12975 3725dda57bbf985a5c787108e3047ba9 406 PRINTS PR01466 Bacterial arginine deiminase signature 362 376 2.8E-44 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 M892_12975 3725dda57bbf985a5c787108e3047ba9 406 PRINTS PR01466 Bacterial arginine deiminase signature 385 403 2.8E-44 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 M892_12975 3725dda57bbf985a5c787108e3047ba9 406 PRINTS PR01466 Bacterial arginine deiminase signature 342 359 2.8E-44 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 M892_12975 3725dda57bbf985a5c787108e3047ba9 406 PRINTS PR01466 Bacterial arginine deiminase signature 2 22 2.8E-44 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 M892_12975 3725dda57bbf985a5c787108e3047ba9 406 TIGRFAM TIGR01078 arcA: arginine deiminase 4 406 1.7E-173 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 M892_12975 3725dda57bbf985a5c787108e3047ba9 406 Hamap MF_00242 Arginine deiminase [arcA]. 1 406 45.466 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 M892_07530 5f1f54e881ee51d6d01af1329454e24a 318 Pfam PF03553 Na+/H+ antiporter family 161 304 1.9E-7 T 12-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 M892_21990 477c4e1db068c19e89db4976f7d2c1bc 357 Gene3D G3DSA:2.40.30.170 58 278 6.4E-75 T 12-10-2018 M892_21990 477c4e1db068c19e89db4976f7d2c1bc 357 Gene3D G3DSA:2.40.50.100 65 197 6.4E-75 T 12-10-2018 M892_21990 477c4e1db068c19e89db4976f7d2c1bc 357 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 60 260 1.4E-14 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain M892_21990 477c4e1db068c19e89db4976f7d2c1bc 357 Gene3D G3DSA:1.10.287.470 99 158 6.4E-75 T 12-10-2018 M892_21990 477c4e1db068c19e89db4976f7d2c1bc 357 Gene3D G3DSA:2.40.420.20 279 348 6.4E-75 T 12-10-2018 M892_21990 477c4e1db068c19e89db4976f7d2c1bc 357 SUPERFAMILY SSF111369 57 274 1.12E-32 T 12-10-2018 M892_21990 477c4e1db068c19e89db4976f7d2c1bc 357 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 351 4.8E-72 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 M892_12970 e676481ff700e06c4fd2cd2a615c26f7 334 Gene3D G3DSA:3.40.50.1370 151 319 4.3E-146 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 M892_12970 e676481ff700e06c4fd2cd2a615c26f7 334 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 M892_12970 e676481ff700e06c4fd2cd2a615c26f7 334 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 332 4.3E-133 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 M892_12970 e676481ff700e06c4fd2cd2a615c26f7 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 268 277 1.7E-25 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 M892_12970 e676481ff700e06c4fd2cd2a615c26f7 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 297 320 1.7E-25 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 M892_12970 e676481ff700e06c4fd2cd2a615c26f7 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 1.7E-25 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 M892_12970 e676481ff700e06c4fd2cd2a615c26f7 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 1.7E-25 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 M892_12970 e676481ff700e06c4fd2cd2a615c26f7 334 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 333 83.392 T 12-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 M892_12970 e676481ff700e06c4fd2cd2a615c26f7 334 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 157 330 2.7E-56 T 12-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 M892_12970 e676481ff700e06c4fd2cd2a615c26f7 334 SUPERFAMILY SSF53671 4 333 7.33E-99 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 M892_12970 e676481ff700e06c4fd2cd2a615c26f7 334 Gene3D G3DSA:3.40.50.1370 5 329 4.3E-146 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 M892_12970 e676481ff700e06c4fd2cd2a615c26f7 334 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 7.4E-46 T 12-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 M892_12970 e676481ff700e06c4fd2cd2a615c26f7 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 311 322 4.1E-32 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 M892_12970 e676481ff700e06c4fd2cd2a615c26f7 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 4.1E-32 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 M892_12970 e676481ff700e06c4fd2cd2a615c26f7 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 4.1E-32 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 M892_12970 e676481ff700e06c4fd2cd2a615c26f7 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 4.1E-32 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 M892_12970 e676481ff700e06c4fd2cd2a615c26f7 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 230 240 4.1E-32 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 M892_24370 c0333e7404248f72a48a42e46c7c2d2f 409 Pfam PF02687 FtsX-like permease family 292 397 1.3E-10 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 M892_05150 4681626fd076b942265251a2d66c5dbf 245 Gene3D G3DSA:3.40.50.150 21 245 1.1E-64 T 12-10-2018 M892_05150 4681626fd076b942265251a2d66c5dbf 245 Hamap MF_01589 Carboxy-S-adenosyl-L-methionine synthase [cmoA]. 6 245 43.293 T 12-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 M892_05150 4681626fd076b942265251a2d66c5dbf 245 PIRSF PIRSF006325 4 245 8.5E-125 T 12-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 M892_05150 4681626fd076b942265251a2d66c5dbf 245 Pfam PF13649 Methyltransferase domain 63 161 1.1E-13 T 12-10-2018 M892_05150 4681626fd076b942265251a2d66c5dbf 245 SUPERFAMILY SSF53335 23 245 4.34E-41 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M892_05150 4681626fd076b942265251a2d66c5dbf 245 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 8 245 9.1E-118 T 12-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 M892_18490 b47a2b7ba84fb779650de94f660e1f3f 214 Pfam PF13665 Domain of unknown function (DUF4150) 22 127 5.8E-35 T 12-10-2018 IPR025425 Domain of unknown function DUF4150 M892_02675 05ee094a738c7554250c32580eeea635 268 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 268 47.283 T 12-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 M892_02675 05ee094a738c7554250c32580eeea635 268 Pfam PF02654 Cobalamin-5-phosphate synthase 25 259 2.5E-52 T 12-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 M892_02675 05ee094a738c7554250c32580eeea635 268 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 22 261 9.3E-35 T 12-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 M892_19150 7d1990702457bf8a557e6767cc247ab6 493 SUPERFAMILY SSF48173 191 468 1.96E-79 T 12-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 M892_19150 7d1990702457bf8a557e6767cc247ab6 493 Pfam PF03441 FAD binding domain of DNA photolyase 266 463 1.1E-56 T 12-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 M892_19150 7d1990702457bf8a557e6767cc247ab6 493 Gene3D G3DSA:3.40.50.620 1 130 3.9E-28 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M892_19150 7d1990702457bf8a557e6767cc247ab6 493 Pfam PF00875 DNA photolyase 6 134 1.0E-22 T 12-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 M892_19150 7d1990702457bf8a557e6767cc247ab6 493 PRINTS PR00147 DNA photolyase signature 336 354 2.5E-6 T 12-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 M892_19150 7d1990702457bf8a557e6767cc247ab6 493 PRINTS PR00147 DNA photolyase signature 316 332 2.5E-6 T 12-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 M892_19150 7d1990702457bf8a557e6767cc247ab6 493 SUPERFAMILY SSF52425 4 194 1.31E-44 T 12-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 M892_19150 7d1990702457bf8a557e6767cc247ab6 493 Gene3D G3DSA:1.25.40.80 166 278 3.8E-15 T 12-10-2018 M892_19150 7d1990702457bf8a557e6767cc247ab6 493 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 316 328 - T 12-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal M892_19150 7d1990702457bf8a557e6767cc247ab6 493 Gene3D G3DSA:1.10.579.10 290 479 2.3E-58 T 12-10-2018 M892_09590 b79421b8c89ffc6c130136d0f30bf0ae 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 58 3.4E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M892_09590 b79421b8c89ffc6c130136d0f30bf0ae 196 SUPERFAMILY SSF48498 81 191 6.34E-11 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily M892_09590 b79421b8c89ffc6c130136d0f30bf0ae 196 SUPERFAMILY SSF46689 5 78 1.31E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_09590 b79421b8c89ffc6c130136d0f30bf0ae 196 Gene3D G3DSA:1.10.357.10 3 196 6.5E-78 T 12-10-2018 M892_09590 b79421b8c89ffc6c130136d0f30bf0ae 196 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 196 41.313 T 12-10-2018 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 M892_11565 5cb1f9692b72770a88139af5f998ecfc 190 SMART SM00987 27 183 2.5E-30 T 12-10-2018 M892_11565 5cb1f9692b72770a88139af5f998ecfc 190 SUPERFAMILY SSF52141 2 189 3.6E-57 T 12-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 M892_11565 5cb1f9692b72770a88139af5f998ecfc 190 Pfam PF03167 Uracil DNA glycosylase superfamily 30 179 3.8E-26 T 12-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 M892_11565 5cb1f9692b72770a88139af5f998ecfc 190 SMART SM00986 27 183 2.5E-30 T 12-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 M892_11565 5cb1f9692b72770a88139af5f998ecfc 190 Gene3D G3DSA:3.40.470.10 1 190 1.5E-74 T 12-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 M892_26380 581155b2c8724c49957cafffb122414b 403 Gene3D G3DSA:1.10.740.10 348 403 4.8E-10 T 12-10-2018 IPR014737 Transposase, Tn5-like, C-terminal M892_26380 581155b2c8724c49957cafffb122414b 403 SUPERFAMILY SSF53098 1 396 3.79E-109 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_26380 581155b2c8724c49957cafffb122414b 403 Pfam PF01609 Transposase DDE domain 221 358 2.9E-5 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_26380 581155b2c8724c49957cafffb122414b 403 Gene3D G3DSA:1.10.246.40 1 65 8.0E-25 T 12-10-2018 IPR038215 Transposase, Tn5-like, N-terminal domain superfamily M892_26380 581155b2c8724c49957cafffb122414b 403 Gene3D G3DSA:3.90.350.10 66 347 4.8E-80 T 12-10-2018 IPR014736 Transposase, Tn5-like, core M892_26380 581155b2c8724c49957cafffb122414b 403 Pfam PF14706 Transposase DNA-binding 9 65 4.1E-17 T 12-10-2018 IPR014735 Transposase, Tn5-like, N-terminal M892_07005 ac2887328093c3cf581e458c41e49cbd 521 SUPERFAMILY SSF55073 366 519 5.96E-35 T 12-10-2018 IPR029787 Nucleotide cyclase M892_07005 ac2887328093c3cf581e458c41e49cbd 521 Gene3D G3DSA:3.30.70.270 348 521 5.8E-41 T 12-10-2018 M892_07005 ac2887328093c3cf581e458c41e49cbd 521 Pfam PF00990 Diguanylate cyclase, GGDEF domain 363 517 1.1E-34 T 12-10-2018 IPR000160 GGDEF domain M892_07005 ac2887328093c3cf581e458c41e49cbd 521 SMART SM00267 351 521 8.5E-35 T 12-10-2018 IPR000160 GGDEF domain M892_07005 ac2887328093c3cf581e458c41e49cbd 521 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 361 519 9.8E-36 T 12-10-2018 IPR000160 GGDEF domain M892_04145 9384c71d9dfbe51e16318b863b2b363f 88 Gene3D G3DSA:1.20.120.910 1 73 3.6E-23 T 12-10-2018 M892_04145 9384c71d9dfbe51e16318b863b2b363f 88 SUPERFAMILY SSF57716 38 71 5.27E-7 T 12-10-2018 M892_04145 9384c71d9dfbe51e16318b863b2b363f 88 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 36 68 8.9E-13 T 12-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 M892_04405 86ad2cec6739a3812dcd7cca73e747fb 545 Gene3D G3DSA:1.10.287.950 213 545 3.5E-74 T 12-10-2018 M892_04405 86ad2cec6739a3812dcd7cca73e747fb 545 ProDom PD936484 POLYPROTEIN GLYCOPROTEIN M G2 TRANSMEMBRANE NONSTRUCTURAL MEMBRANE CONTAINS: PRECURSOR SIGNAL 166 538 0.002 T 12-10-2018 M892_04405 86ad2cec6739a3812dcd7cca73e747fb 545 SMART SM00304 214 268 8.3E-15 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M892_04405 86ad2cec6739a3812dcd7cca73e747fb 545 Pfam PF00672 HAMP domain 215 264 8.1E-12 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M892_04405 86ad2cec6739a3812dcd7cca73e747fb 545 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 331 510 3.4E-42 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M892_04405 86ad2cec6739a3812dcd7cca73e747fb 545 SUPERFAMILY SSF58104 236 545 2.35E-75 T 12-10-2018 M892_04405 86ad2cec6739a3812dcd7cca73e747fb 545 SMART SM00283 283 544 1.2E-71 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M892_09040 217457983a8b2ce8e46a4a4212a47e69 296 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 47 61 - T 12-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 M892_09040 217457983a8b2ce8e46a4a4212a47e69 296 Gene3D G3DSA:3.40.1010.10 41 157 1.1E-43 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 M892_09040 217457983a8b2ce8e46a4a4212a47e69 296 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 122 155 - T 12-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 M892_09040 217457983a8b2ce8e46a4a4212a47e69 296 Gene3D G3DSA:3.30.950.10 158 295 8.3E-45 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 M892_09040 217457983a8b2ce8e46a4a4212a47e69 296 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 44 253 8.4E-44 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 M892_09040 217457983a8b2ce8e46a4a4212a47e69 296 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 42 275 2.0E-92 T 12-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 M892_09040 217457983a8b2ce8e46a4a4212a47e69 296 SUPERFAMILY SSF53790 38 285 8.24E-78 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 M892_13295 5f8a2184fe2c4955ad4b1a38e4596141 345 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 164 320 1.2E-55 T 12-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_13295 5f8a2184fe2c4955ad4b1a38e4596141 345 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 3 332 2.7E-190 T 12-10-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 M892_13295 5f8a2184fe2c4955ad4b1a38e4596141 345 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 109 3.9E-32 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_13295 5f8a2184fe2c4955ad4b1a38e4596141 345 PIRSF PIRSF000149 1 342 2.5E-128 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_13295 5f8a2184fe2c4955ad4b1a38e4596141 345 SUPERFAMILY SSF51735 2 183 1.3E-50 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_13295 5f8a2184fe2c4955ad4b1a38e4596141 345 Gene3D G3DSA:3.30.360.10 158 322 1.2E-128 T 12-10-2018 M892_13295 5f8a2184fe2c4955ad4b1a38e4596141 345 SMART SM00846 2 159 2.8E-74 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_13295 5f8a2184fe2c4955ad4b1a38e4596141 345 Hamap MF_01640 D-erythrose-4-phosphate dehydrogenase [epd]. 1 341 65.996 T 12-10-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 M892_13295 5f8a2184fe2c4955ad4b1a38e4596141 345 SUPERFAMILY SSF55347 159 321 8.93E-59 T 12-10-2018 M892_13295 5f8a2184fe2c4955ad4b1a38e4596141 345 Gene3D G3DSA:3.40.50.720 3 332 1.2E-128 T 12-10-2018 M892_13295 5f8a2184fe2c4955ad4b1a38e4596141 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 276 291 1.1E-29 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_13295 5f8a2184fe2c4955ad4b1a38e4596141 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 116 129 1.1E-29 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_13295 5f8a2184fe2c4955ad4b1a38e4596141 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 153 171 1.1E-29 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_13295 5f8a2184fe2c4955ad4b1a38e4596141 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 236 253 1.1E-29 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_13295 5f8a2184fe2c4955ad4b1a38e4596141 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 180 196 1.1E-29 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_27000 94ca87a0f022d9d3bc016e63f5b825e0 425 Gene3D G3DSA:1.20.1250.20 8 209 9.0E-23 T 12-10-2018 M892_27000 94ca87a0f022d9d3bc016e63f5b825e0 425 Pfam PF07690 Major Facilitator Superfamily 16 362 8.0E-29 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 M892_27000 94ca87a0f022d9d3bc016e63f5b825e0 425 Gene3D G3DSA:1.20.1250.20 213 408 8.8E-20 T 12-10-2018 M892_27000 94ca87a0f022d9d3bc016e63f5b825e0 425 SUPERFAMILY SSF103473 8 408 1.44E-50 T 12-10-2018 IPR036259 MFS transporter superfamily M892_27040 6ef56a76530b1c80e0944cce679b909c 374 SUPERFAMILY SSF56935 26 374 1.25E-16 T 12-10-2018 M892_27040 6ef56a76530b1c80e0944cce679b909c 374 Pfam PF16966 Porin-like glycoporin RafY 46 374 8.4E-99 T 12-10-2018 IPR016963 Glycoporin RafY M892_20865 4c688c7aad53a2aecf656613c300f559 411 SMART SM00852 184 321 1.2E-41 T 12-10-2018 IPR001453 MoaB/Mog domain M892_20865 4c688c7aad53a2aecf656613c300f559 411 SUPERFAMILY SSF63882 7 180 6.67E-56 T 12-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 M892_20865 4c688c7aad53a2aecf656613c300f559 411 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 180 317 3.0E-32 T 12-10-2018 IPR001453 MoaB/Mog domain M892_20865 4c688c7aad53a2aecf656613c300f559 411 Pfam PF03453 MoeA N-terminal region (domain I and II) 11 171 1.7E-46 T 12-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 M892_20865 4c688c7aad53a2aecf656613c300f559 411 Gene3D G3DSA:3.40.980.10 179 331 3.9E-145 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily M892_20865 4c688c7aad53a2aecf656613c300f559 411 Gene3D G3DSA:2.40.340.10 332 401 3.9E-145 T 12-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 M892_20865 4c688c7aad53a2aecf656613c300f559 411 Pfam PF03454 MoeA C-terminal region (domain IV) 336 406 6.5E-22 T 12-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 M892_20865 4c688c7aad53a2aecf656613c300f559 411 Pfam PF00994 Probable molybdopterin binding domain 186 320 2.4E-25 T 12-10-2018 IPR001453 MoaB/Mog domain M892_20865 4c688c7aad53a2aecf656613c300f559 411 Gene3D G3DSA:2.170.190.11 53 145 3.9E-145 T 12-10-2018 M892_20865 4c688c7aad53a2aecf656613c300f559 411 SUPERFAMILY SSF53218 181 327 1.03E-41 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily M892_20865 4c688c7aad53a2aecf656613c300f559 411 SUPERFAMILY SSF63867 332 410 2.49E-23 T 12-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 M892_20865 4c688c7aad53a2aecf656613c300f559 411 Gene3D G3DSA:3.90.105.10 31 178 3.9E-145 T 12-10-2018 M892_20865 4c688c7aad53a2aecf656613c300f559 411 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 257 290 - T 12-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 M892_07395 a8789c3021dea63d41b76c65cc16d5ab 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 2.0E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_07395 a8789c3021dea63d41b76c65cc16d5ab 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 2.0E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_07395 a8789c3021dea63d41b76c65cc16d5ab 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 2.0E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_07395 a8789c3021dea63d41b76c65cc16d5ab 297 Gene3D G3DSA:3.40.190.10 166 263 4.1E-49 T 12-10-2018 M892_07395 a8789c3021dea63d41b76c65cc16d5ab 297 Gene3D G3DSA:1.10.10.10 9 98 5.0E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_07395 a8789c3021dea63d41b76c65cc16d5ab 297 Pfam PF03466 LysR substrate binding domain 95 291 1.1E-16 T 12-10-2018 IPR005119 LysR, substrate-binding M892_07395 a8789c3021dea63d41b76c65cc16d5ab 297 Gene3D G3DSA:3.40.190.10 103 288 4.1E-49 T 12-10-2018 M892_07395 a8789c3021dea63d41b76c65cc16d5ab 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 69 1.7E-20 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_07395 a8789c3021dea63d41b76c65cc16d5ab 297 SUPERFAMILY SSF46785 4 116 1.0E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_07395 a8789c3021dea63d41b76c65cc16d5ab 297 SUPERFAMILY SSF53850 94 294 6.15E-21 T 12-10-2018 M892_06510 ecf15dff457c63f14aa26b8542002e50 347 Pfam PF13384 Homeodomain-like domain 28 67 9.4E-8 T 12-10-2018 M892_06510 ecf15dff457c63f14aa26b8542002e50 347 SUPERFAMILY SSF53098 223 318 2.28E-7 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_06510 ecf15dff457c63f14aa26b8542002e50 347 Pfam PF13592 Winged helix-turn helix 99 155 4.0E-19 T 12-10-2018 IPR025959 Winged helix-turn helix domain M892_06510 ecf15dff457c63f14aa26b8542002e50 347 SUPERFAMILY SSF46689 16 131 1.43E-23 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_06510 ecf15dff457c63f14aa26b8542002e50 347 Gene3D G3DSA:3.30.420.470 137 342 1.8E-12 T 12-10-2018 M892_06510 ecf15dff457c63f14aa26b8542002e50 347 Pfam PF13358 DDE superfamily endonuclease 169 312 5.4E-35 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_19590 75b8eff7dfe0bac85275093c037f68e2 171 PIRSF PIRSF021320 15 170 9.6E-49 T 12-10-2018 IPR009326 Protein of unknown function DUF984 M892_19590 75b8eff7dfe0bac85275093c037f68e2 171 Gene3D G3DSA:3.10.400.10 11 167 6.1E-60 T 12-10-2018 M892_19590 75b8eff7dfe0bac85275093c037f68e2 171 Pfam PF04266 ASCH domain 55 167 2.8E-21 T 12-10-2018 IPR007374 ASCH domain M892_19590 75b8eff7dfe0bac85275093c037f68e2 171 SMART SM01022 44 167 3.2E-36 T 12-10-2018 IPR007374 ASCH domain M892_19590 75b8eff7dfe0bac85275093c037f68e2 171 SUPERFAMILY SSF88697 17 168 1.14E-52 T 12-10-2018 IPR015947 PUA-like superfamily M892_20935 8d7ab01aeefdf72612abce9ce619af5d 428 SUPERFAMILY SSF52540 76 328 1.58E-16 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_20935 8d7ab01aeefdf72612abce9ce619af5d 428 SUPERFAMILY SSF52540 2 123 4.69E-8 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_20935 8d7ab01aeefdf72612abce9ce619af5d 428 Gene3D G3DSA:3.40.50.300 1 138 2.4E-6 T 12-10-2018 M892_20935 8d7ab01aeefdf72612abce9ce619af5d 428 Gene3D G3DSA:3.40.50.300 144 344 4.1E-23 T 12-10-2018 M892_01650 98e8c99e83ea9220da9707c9834dda9a 157 Gene3D G3DSA:3.30.450.40 2 157 5.3E-63 T 12-10-2018 IPR029016 GAF-like domain superfamily M892_01650 98e8c99e83ea9220da9707c9834dda9a 157 SUPERFAMILY SSF55781 4 145 2.86E-40 T 12-10-2018 M892_01650 98e8c99e83ea9220da9707c9834dda9a 157 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 89 106 - T 12-10-2018 IPR000614 Free Met sulfoxide reductase conserved site M892_01650 98e8c99e83ea9220da9707c9834dda9a 157 Pfam PF13185 GAF domain 37 144 2.9E-9 T 12-10-2018 IPR003018 GAF domain GO:0005515 M892_26250 c8dbf5738081af78bef647d5b1160024 479 Pfam PF03929 PepSY-associated TM region 24 416 5.0E-64 T 12-10-2018 IPR005625 PepSY-associated TM protein M892_26365 ef823fb565107a33a0469ab783118cea 696 Pfam PF00771 FHIPEP family 25 687 1.1E-241 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 M892_26365 ef823fb565107a33a0469ab783118cea 696 Gene3D G3DSA:3.40.30.60 358 501 9.3E-45 T 12-10-2018 M892_26365 ef823fb565107a33a0469ab783118cea 696 Gene3D G3DSA:1.10.8.540 502 589 5.8E-13 T 12-10-2018 M892_26365 ef823fb565107a33a0469ab783118cea 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 155 173 6.2E-55 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 M892_26365 ef823fb565107a33a0469ab783118cea 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 236 250 6.2E-55 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 M892_26365 ef823fb565107a33a0469ab783118cea 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 136 152 6.2E-55 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 M892_26365 ef823fb565107a33a0469ab783118cea 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 32 45 6.2E-55 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 M892_26365 ef823fb565107a33a0469ab783118cea 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 185 202 6.2E-55 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 M892_26365 ef823fb565107a33a0469ab783118cea 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 69 88 6.2E-55 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 M892_26365 ef823fb565107a33a0469ab783118cea 696 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 16 694 1.2E-235 T 12-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 M892_26365 ef823fb565107a33a0469ab783118cea 696 PIRSF PIRSF005419 2 696 4.4E-222 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 M892_26365 ef823fb565107a33a0469ab783118cea 696 Gene3D G3DSA:1.10.490.80 592 695 6.3E-10 T 12-10-2018 M892_26365 ef823fb565107a33a0469ab783118cea 696 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 141 164 - T 12-10-2018 IPR025505 FHIPEP conserved site M892_01065 bc5c78c4c290374fdf404840c248a816 222 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 20 192 5.8E-11 T 12-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain M892_01065 bc5c78c4c290374fdf404840c248a816 222 SUPERFAMILY SSF52540 17 217 2.62E-27 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_01065 bc5c78c4c290374fdf404840c248a816 222 Gene3D G3DSA:3.40.50.300 18 219 7.4E-30 T 12-10-2018 M892_13960 ad2b6d97e9f52da3175c263d4f61c0db 327 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 1.2E-17 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 M892_13960 ad2b6d97e9f52da3175c263d4f61c0db 327 Gene3D G3DSA:3.40.50.300 3 326 3.3E-90 T 12-10-2018 M892_13960 ad2b6d97e9f52da3175c263d4f61c0db 327 SUPERFAMILY SSF52540 5 252 1.27E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_13960 ad2b6d97e9f52da3175c263d4f61c0db 327 SMART SM00382 34 231 1.7E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_13960 ad2b6d97e9f52da3175c263d4f61c0db 327 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_13960 ad2b6d97e9f52da3175c263d4f61c0db 327 Pfam PF00005 ABC transporter 26 181 5.9E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_13960 ad2b6d97e9f52da3175c263d4f61c0db 327 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 317 1.5E-22 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 M892_24620 e8db79b1f84df8860e310edd259402d8 217 SUPERFAMILY SSF46785 2 84 9.98E-32 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_24620 e8db79b1f84df8860e310edd259402d8 217 SUPERFAMILY SSF46785 90 174 4.9E-29 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_24620 e8db79b1f84df8860e310edd259402d8 217 Hamap MF_01584 UPF0502 protein YceH [yceH]. 5 217 35.601 T 12-10-2018 IPR007432 Protein of unknown function DUF480 M892_24620 e8db79b1f84df8860e310edd259402d8 217 Gene3D G3DSA:1.10.10.10 95 175 1.0E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_24620 e8db79b1f84df8860e310edd259402d8 217 Pfam PF04337 Protein of unknown function, DUF480 5 158 2.2E-65 T 12-10-2018 IPR007432 Protein of unknown function DUF480 M892_24620 e8db79b1f84df8860e310edd259402d8 217 Gene3D G3DSA:1.10.10.10 1 90 3.0E-36 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_19350 7c8e817bbca8899e2aca75eb8a98f8ae 143 Pfam PF09391 Protein of unknown function (DUF2000) 10 143 9.3E-38 T 12-10-2018 IPR018988 Protein of unknown function DUF2000 M892_19350 7c8e817bbca8899e2aca75eb8a98f8ae 143 Gene3D G3DSA:3.40.1490.10 8 142 1.4E-14 T 12-10-2018 IPR023476 Peptidyl-tRNA hydrolase II domain superfamily MetaCyc: PWY-6308 M892_19350 7c8e817bbca8899e2aca75eb8a98f8ae 143 PIRSF PIRSF033736 3 143 2.8E-27 T 12-10-2018 IPR017021 Uncharacterised conserved protein UCP033763 M892_19350 7c8e817bbca8899e2aca75eb8a98f8ae 143 SUPERFAMILY SSF102462 8 143 3.5E-35 T 12-10-2018 IPR023476 Peptidyl-tRNA hydrolase II domain superfamily MetaCyc: PWY-6308 M892_23290 5e53e47a0e73660afdbbd93d1cbb234c 171 ProSitePatterns PS00893 Nudix box signature. 68 89 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 M892_23290 5e53e47a0e73660afdbbd93d1cbb234c 171 Gene3D G3DSA:3.90.79.10 1 167 3.0E-48 T 12-10-2018 M892_23290 5e53e47a0e73660afdbbd93d1cbb234c 171 SUPERFAMILY SSF55811 2 169 3.38E-45 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 M892_23290 5e53e47a0e73660afdbbd93d1cbb234c 171 Pfam PF00293 NUDIX domain 33 148 9.8E-17 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 M892_16630 a3f0fbcffcbb6e491d6e298833ccf3a1 353 Gene3D G3DSA:3.90.226.10 109 306 1.9E-45 T 12-10-2018 M892_16630 a3f0fbcffcbb6e491d6e298833ccf3a1 353 SUPERFAMILY SSF52096 103 303 2.26E-30 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily M892_16630 a3f0fbcffcbb6e491d6e298833ccf3a1 353 Pfam PF08496 Peptidase family S49 N-terminal 2 162 1.0E-55 T 12-10-2018 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 M892_16630 a3f0fbcffcbb6e491d6e298833ccf3a1 353 Pfam PF01343 Peptidase family S49 166 314 3.5E-48 T 12-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 M892_16630 a3f0fbcffcbb6e491d6e298833ccf3a1 353 Gene3D G3DSA:3.40.1750.20 206 270 1.9E-45 T 12-10-2018 M892_12810 8379fc01ef1f85e254c788f439c6794e 481 Pfam PF01523 Putative modulator of DNA gyrase 35 332 9.1E-65 T 12-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 M892_12810 8379fc01ef1f85e254c788f439c6794e 481 PIRSF PIRSF004919 14 481 7.0E-143 T 12-10-2018 IPR025502 TldD M892_12810 8379fc01ef1f85e254c788f439c6794e 481 Gene3D G3DSA:3.30.2290.10 8 240 1.3E-15 T 12-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal M892_12810 8379fc01ef1f85e254c788f439c6794e 481 SUPERFAMILY SSF111283 18 480 4.97E-129 T 12-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 M892_16390 1329e4436ccdee50a172ba6f40acc57a 193 SUPERFAMILY SSF52972 1 187 9.81E-60 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like M892_16390 1329e4436ccdee50a172ba6f40acc57a 193 Gene3D G3DSA:3.90.950.10 5 193 5.8E-59 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like M892_16390 1329e4436ccdee50a172ba6f40acc57a 193 Pfam PF02545 Maf-like protein 5 187 1.1E-44 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 M892_16390 1329e4436ccdee50a172ba6f40acc57a 193 Hamap MF_00528 Septum formation protein Maf [maf]. 5 192 29.608 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 M892_16390 1329e4436ccdee50a172ba6f40acc57a 193 TIGRFAM TIGR00172 maf: septum formation protein Maf 4 186 2.5E-53 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 M892_16390 1329e4436ccdee50a172ba6f40acc57a 193 PIRSF PIRSF006305 1 193 7.2E-44 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 M892_08275 7021c1808a265190701ad4b94d331be5 470 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 6 470 1.7E-250 T 12-10-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 M892_08275 7021c1808a265190701ad4b94d331be5 470 Gene3D G3DSA:3.50.50.60 251 398 9.5E-44 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_08275 7021c1808a265190701ad4b94d331be5 470 Gene3D G3DSA:3.40.50.720 146 250 2.2E-13 T 12-10-2018 M892_08275 7021c1808a265190701ad4b94d331be5 470 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 457 1.6E-23 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 M892_08275 7021c1808a265190701ad4b94d331be5 470 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 25 134 1.0E-38 T 12-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 M892_08275 7021c1808a265190701ad4b94d331be5 470 SUPERFAMILY SSF51971 145 399 1.18E-68 T 12-10-2018 M892_08275 7021c1808a265190701ad4b94d331be5 470 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 9.2E-37 T 12-10-2018 M892_08275 7021c1808a265190701ad4b94d331be5 470 PRINTS PR00419 Adrenodoxin reductase family signature 288 302 9.2E-37 T 12-10-2018 M892_08275 7021c1808a265190701ad4b94d331be5 470 PRINTS PR00419 Adrenodoxin reductase family signature 322 335 9.2E-37 T 12-10-2018 M892_08275 7021c1808a265190701ad4b94d331be5 470 PRINTS PR00419 Adrenodoxin reductase family signature 213 223 9.2E-37 T 12-10-2018 M892_08275 7021c1808a265190701ad4b94d331be5 470 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 9.2E-37 T 12-10-2018 M892_08275 7021c1808a265190701ad4b94d331be5 470 SUPERFAMILY SSF46548 6 157 2.25E-40 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 M892_08275 7021c1808a265190701ad4b94d331be5 470 Gene3D G3DSA:1.10.1060.10 11 145 3.2E-35 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 M892_14075 ca8cc70fad89156698afd35022f18114 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 235 250 1.0E-12 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M892_14075 ca8cc70fad89156698afd35022f18114 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 96 110 1.0E-12 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M892_14075 ca8cc70fad89156698afd35022f18114 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 175 194 1.0E-12 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M892_14075 ca8cc70fad89156698afd35022f18114 446 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 377 442 1.0E-11 T 12-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M892_14075 ca8cc70fad89156698afd35022f18114 446 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 4 445 46.636 T 12-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M892_14075 ca8cc70fad89156698afd35022f18114 446 Gene3D G3DSA:3.40.120.10 258 340 1.9E-59 T 12-10-2018 M892_14075 ca8cc70fad89156698afd35022f18114 446 SUPERFAMILY SSF53738 4 182 2.2E-48 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M892_14075 ca8cc70fad89156698afd35022f18114 446 Gene3D G3DSA:3.40.120.10 176 363 1.9E-59 T 12-10-2018 M892_14075 ca8cc70fad89156698afd35022f18114 446 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 5 136 1.4E-45 T 12-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M892_14075 ca8cc70fad89156698afd35022f18114 446 SUPERFAMILY SSF53738 259 365 4.32E-28 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M892_14075 ca8cc70fad89156698afd35022f18114 446 Gene3D G3DSA:3.40.120.10 4 155 5.1E-49 T 12-10-2018 M892_14075 ca8cc70fad89156698afd35022f18114 446 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 158 255 6.8E-19 T 12-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M892_14075 ca8cc70fad89156698afd35022f18114 446 SUPERFAMILY SSF53738 157 257 2.12E-29 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M892_14075 ca8cc70fad89156698afd35022f18114 446 SUPERFAMILY SSF55957 358 444 1.96E-20 T 12-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M892_14075 ca8cc70fad89156698afd35022f18114 446 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 259 368 2.3E-30 T 12-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M892_14075 ca8cc70fad89156698afd35022f18114 446 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 8 443 5.7E-201 T 12-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M892_14075 ca8cc70fad89156698afd35022f18114 446 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 97 106 - T 12-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M892_14075 ca8cc70fad89156698afd35022f18114 446 Gene3D G3DSA:3.30.310.50 371 446 3.6E-24 T 12-10-2018 M892_15190 f1d12acafe1717b2b4f0f92cac2b9c3f 50 Gene3D G3DSA:1.10.740.10 1 49 8.9E-22 T 12-10-2018 IPR014737 Transposase, Tn5-like, C-terminal M892_15190 f1d12acafe1717b2b4f0f92cac2b9c3f 50 SUPERFAMILY SSF53098 2 49 5.01E-13 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_15190 f1d12acafe1717b2b4f0f92cac2b9c3f 50 Pfam PF02281 Transposase Tn5 dimerisation domain 2 45 2.3E-11 T 12-10-2018 IPR003201 Transposase Tn5, dimerisation M892_26010 f745fbca55c35418719c9c1fea4cf851 87 ProDom PD068655 ORF26 3'REGION LYS GENE PRECURSOR ORF30 SIGNAL PHAGE 5 86 5.0E-10 T 12-10-2018 IPR024406 Phage tail assembly chaperone TAC-10 M892_26010 f745fbca55c35418719c9c1fea4cf851 87 Pfam PF10963 Phage tail assembly chaperone 5 87 8.1E-25 T 12-10-2018 IPR024406 Phage tail assembly chaperone TAC-10 M892_08685 7c9a0e87310fd6675d14609826659633 94 Gene3D G3DSA:3.30.160.390 1 93 9.5E-14 T 12-10-2018 IPR038488 Integrase, DNA-binding domain superfamily M892_08685 7c9a0e87310fd6675d14609826659633 94 Pfam PF13356 Arm DNA-binding domain 4 88 7.4E-13 T 12-10-2018 IPR025166 Integrase, DNA-binding domain M892_05105 3cd22e08fd674eb53e4dbf06352a574e 35 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 30 1.1E-20 T 12-10-2018 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545 M892_05105 3cd22e08fd674eb53e4dbf06352a574e 35 Pfam PF08173 Membrane bound YbgT-like protein 1 27 1.3E-17 T 12-10-2018 IPR012994 Membrane bound YbgT-like M892_14055 dff0222d103a59b4757d7f3963550aad 98 Gene3D G3DSA:3.30.110.60 1 98 8.1E-37 T 12-10-2018 IPR035920 YhbY-like superfamily M892_14055 dff0222d103a59b4757d7f3963550aad 98 SMART SM01103 3 86 2.0E-41 T 12-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 M892_14055 dff0222d103a59b4757d7f3963550aad 98 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 7.4E-21 T 12-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 M892_14055 dff0222d103a59b4757d7f3963550aad 98 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 98 9.0E-44 T 12-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 M892_14055 dff0222d103a59b4757d7f3963550aad 98 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 97 1.5E-36 T 12-10-2018 IPR017924 RNA-binding protein YhbY GO:0003723 M892_14055 dff0222d103a59b4757d7f3963550aad 98 SUPERFAMILY SSF75471 1 94 6.41E-30 T 12-10-2018 IPR035920 YhbY-like superfamily M892_08015 d79703c10b3ca453300fe80483482428 511 Pfam PF03023 MviN-like protein 21 470 2.6E-144 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ M892_08015 d79703c10b3ca453300fe80483482428 511 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 2 502 2.0E-135 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ M892_08015 d79703c10b3ca453300fe80483482428 511 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 1 467 19.176 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ M892_08015 d79703c10b3ca453300fe80483482428 511 PIRSF PIRSF002869 1 508 1.0E-146 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ M892_08015 d79703c10b3ca453300fe80483482428 511 PRINTS PR01806 Virulence factor MviN signature 45 61 1.8E-76 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ M892_08015 d79703c10b3ca453300fe80483482428 511 PRINTS PR01806 Virulence factor MviN signature 26 45 1.8E-76 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ M892_08015 d79703c10b3ca453300fe80483482428 511 PRINTS PR01806 Virulence factor MviN signature 133 157 1.8E-76 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ M892_08015 d79703c10b3ca453300fe80483482428 511 PRINTS PR01806 Virulence factor MviN signature 357 376 1.8E-76 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ M892_08015 d79703c10b3ca453300fe80483482428 511 PRINTS PR01806 Virulence factor MviN signature 409 426 1.8E-76 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ M892_08015 d79703c10b3ca453300fe80483482428 511 PRINTS PR01806 Virulence factor MviN signature 259 285 1.8E-76 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ M892_08015 d79703c10b3ca453300fe80483482428 511 PRINTS PR01806 Virulence factor MviN signature 157 178 1.8E-76 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ M892_06875 06be3caa86f290c09aa9dc9475193606 156 Pfam PF02590 Predicted SPOUT methyltransferase 1 154 8.1E-49 T 12-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 M892_06875 06be3caa86f290c09aa9dc9475193606 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 27.78 T 12-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 M892_06875 06be3caa86f290c09aa9dc9475193606 156 SUPERFAMILY SSF75217 1 154 1.36E-50 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases M892_06875 06be3caa86f290c09aa9dc9475193606 156 Gene3D G3DSA:3.40.1280.10 1 156 5.4E-53 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal M892_06875 06be3caa86f290c09aa9dc9475193606 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 156 4.5E-79 T 12-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 M892_06875 06be3caa86f290c09aa9dc9475193606 156 PIRSF PIRSF004505 1 155 4.0E-44 T 12-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 M892_25580 72f8cf91d73432df98e1874c14479064 547 SMART SM00304 218 270 1.9E-11 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M892_25580 72f8cf91d73432df98e1874c14479064 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 87 102 2.6E-24 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M892_25580 72f8cf91d73432df98e1874c14479064 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 306 335 2.6E-24 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M892_25580 72f8cf91d73432df98e1874c14479064 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 412 441 2.6E-24 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M892_25580 72f8cf91d73432df98e1874c14479064 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 383 410 2.6E-24 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M892_25580 72f8cf91d73432df98e1874c14479064 547 Gene3D G3DSA:1.10.287.950 217 547 4.3E-71 T 12-10-2018 M892_25580 72f8cf91d73432df98e1874c14479064 547 SUPERFAMILY SSF58104 239 547 6.54E-71 T 12-10-2018 M892_25580 72f8cf91d73432df98e1874c14479064 547 SMART SM00283 285 546 1.9E-67 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M892_25580 72f8cf91d73432df98e1874c14479064 547 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 350 512 8.6E-41 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M892_25580 72f8cf91d73432df98e1874c14479064 547 Pfam PF00672 HAMP domain 219 266 6.0E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M892_13320 a8c393d9b1b754fa9b3f36af47130768 313 SUPERFAMILY SSF53850 109 310 8.51E-23 T 12-10-2018 M892_13320 a8c393d9b1b754fa9b3f36af47130768 313 Pfam PF03466 LysR substrate binding domain 109 289 1.5E-16 T 12-10-2018 IPR005119 LysR, substrate-binding M892_13320 a8c393d9b1b754fa9b3f36af47130768 313 Hamap MF_00513 HTH-type transcriptional regulator ArgP [argP]. 16 313 53.852 T 12-10-2018 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria M892_13320 a8c393d9b1b754fa9b3f36af47130768 313 Gene3D G3DSA:3.40.190.290 104 311 4.1E-65 T 12-10-2018 M892_13320 a8c393d9b1b754fa9b3f36af47130768 313 Gene3D G3DSA:1.10.10.10 16 100 1.3E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_13320 a8c393d9b1b754fa9b3f36af47130768 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 23 78 9.1E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_13320 a8c393d9b1b754fa9b3f36af47130768 313 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 19 311 3.9E-107 T 12-10-2018 IPR017685 HTH-type transcriptional regulator ArgP M892_13320 a8c393d9b1b754fa9b3f36af47130768 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 57 2.7E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_13320 a8c393d9b1b754fa9b3f36af47130768 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 47 2.7E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_13320 a8c393d9b1b754fa9b3f36af47130768 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 57 68 2.7E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_13320 a8c393d9b1b754fa9b3f36af47130768 313 SUPERFAMILY SSF46785 19 127 4.54E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_24090 9849740b8f5957fd2e7248d38d98def8 298 ProSitePatterns PS01062 Hydroxymethylglutaryl-coenzyme A lyase active site. 232 241 - T 12-10-2018 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site GO:0004419 KEGG: 00072+4.1.3.4|KEGG: 00280+4.1.3.4|KEGG: 00281+4.1.3.4|KEGG: 00650+4.1.3.4|MetaCyc: PWY-5074|Reactome: R-HSA-77111|Reactome: R-HSA-9033241 M892_24090 9849740b8f5957fd2e7248d38d98def8 298 Pfam PF00682 HMGL-like 6 276 5.7E-51 T 12-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 M892_24090 9849740b8f5957fd2e7248d38d98def8 298 SUPERFAMILY SSF51569 2 290 3.81E-73 T 12-10-2018 M892_24090 9849740b8f5957fd2e7248d38d98def8 298 Gene3D G3DSA:3.20.20.70 1 298 5.2E-128 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M892_19625 6b1ca7ba529033814428a14ab99f1ece 1033 Gene3D G3DSA:3.30.70.1430 38 810 4.1E-252 T 12-10-2018 M892_19625 6b1ca7ba529033814428a14ab99f1ece 1033 SUPERFAMILY SSF82866 797 1022 7.72E-47 T 12-10-2018 M892_19625 6b1ca7ba529033814428a14ab99f1ece 1033 SUPERFAMILY SSF82866 286 480 1.7E-33 T 12-10-2018 M892_19625 6b1ca7ba529033814428a14ab99f1ece 1033 Gene3D G3DSA:3.30.2090.10 715 802 4.1E-252 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M892_19625 6b1ca7ba529033814428a14ab99f1ece 1033 Gene3D G3DSA:3.30.2090.10 173 265 4.1E-252 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M892_19625 6b1ca7ba529033814428a14ab99f1ece 1033 Gene3D G3DSA:3.30.70.1320 131 318 4.1E-252 T 12-10-2018 M892_19625 6b1ca7ba529033814428a14ab99f1ece 1033 SUPERFAMILY SSF82714 724 797 1.18E-9 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M892_19625 6b1ca7ba529033814428a14ab99f1ece 1033 Gene3D G3DSA:1.20.1640.10 500 1019 4.1E-252 T 12-10-2018 M892_19625 6b1ca7ba529033814428a14ab99f1ece 1033 Gene3D G3DSA:1.20.1640.10 8 499 4.1E-252 T 12-10-2018 M892_19625 6b1ca7ba529033814428a14ab99f1ece 1033 SUPERFAMILY SSF82714 177 259 1.96E-17 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M892_19625 6b1ca7ba529033814428a14ab99f1ece 1033 SUPERFAMILY SSF82693 38 131 3.71E-17 T 12-10-2018 M892_19625 6b1ca7ba529033814428a14ab99f1ece 1033 Gene3D G3DSA:3.30.70.1440 668 859 4.1E-252 T 12-10-2018 M892_19625 6b1ca7ba529033814428a14ab99f1ece 1033 Pfam PF00873 AcrB/AcrD/AcrF family 1 1021 2.2E-157 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_19625 6b1ca7ba529033814428a14ab99f1ece 1033 Gene3D G3DSA:3.30.70.1430 557 667 4.1E-252 T 12-10-2018 M892_19625 6b1ca7ba529033814428a14ab99f1ece 1033 PRINTS PR00702 Acriflavin resistance protein family signature 324 347 6.5E-22 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_19625 6b1ca7ba529033814428a14ab99f1ece 1033 PRINTS PR00702 Acriflavin resistance protein family signature 378 402 6.5E-22 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_19625 6b1ca7ba529033814428a14ab99f1ece 1033 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 6.5E-22 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_19625 6b1ca7ba529033814428a14ab99f1ece 1033 PRINTS PR00702 Acriflavin resistance protein family signature 431 454 6.5E-22 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_19625 6b1ca7ba529033814428a14ab99f1ece 1033 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 6.5E-22 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_19625 6b1ca7ba529033814428a14ab99f1ece 1033 SUPERFAMILY SSF82693 136 317 1.52E-6 T 12-10-2018 M892_04510 baf269cea6445ce8847bfbcd9ccdd86d 297 Pfam PF07201 HrpJ-like domain 60 226 3.4E-39 T 12-10-2018 IPR010812 Hypersensitivity response secretion-like, HrpJ GO:0009405|GO:0019867|GO:0046903 M892_04510 baf269cea6445ce8847bfbcd9ccdd86d 297 TIGRFAM TIGR02568 LcrE: type III secretion regulator YopN/LcrE/InvE/MxiC 37 285 9.1E-78 T 12-10-2018 IPR013401 Type III secretion regulator, YopN/LcrE/InvE/MxiC GO:0009986|GO:0030254|GO:0050709 M892_04510 baf269cea6445ce8847bfbcd9ccdd86d 297 SUPERFAMILY SSF140591 75 272 1.73E-49 T 12-10-2018 M892_13840 da93c142d8858554163f6cbd8394eab8 264 Pfam PF02548 Ketopantoate hydroxymethyltransferase 3 258 9.5E-108 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 M892_13840 da93c142d8858554163f6cbd8394eab8 264 SUPERFAMILY SSF51621 3 262 2.33E-105 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 M892_13840 da93c142d8858554163f6cbd8394eab8 264 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 262 3.0E-115 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 M892_13840 da93c142d8858554163f6cbd8394eab8 264 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 263 41.231 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 M892_13840 da93c142d8858554163f6cbd8394eab8 264 PIRSF PIRSF000388 1 264 3.4E-101 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 M892_13840 da93c142d8858554163f6cbd8394eab8 264 Gene3D G3DSA:3.20.20.60 1 263 1.8E-105 T 12-10-2018 M892_02510 4603f054bc0501a33e51731b1dec601c 304 ProSitePatterns PS01044 Squalene and phytoene synthases signature 1. 117 132 - T 12-10-2018 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 M892_02510 4603f054bc0501a33e51731b1dec601c 304 ProSitePatterns PS01045 Squalene and phytoene synthases signature 2. 146 171 - T 12-10-2018 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 M892_02510 4603f054bc0501a33e51731b1dec601c 304 Pfam PF00494 Squalene/phytoene synthase 10 254 1.0E-46 T 12-10-2018 M892_02510 4603f054bc0501a33e51731b1dec601c 304 Gene3D G3DSA:1.10.600.10 3 271 1.7E-61 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily M892_02510 4603f054bc0501a33e51731b1dec601c 304 SUPERFAMILY SSF48576 5 271 4.89E-64 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily M892_00785 14999237657407d858b1680d269c206f 210 Gene3D G3DSA:3.40.50.720 1 209 4.0E-40 T 12-10-2018 M892_00785 14999237657407d858b1680d269c206f 210 SUPERFAMILY SSF51735 1 206 9.38E-36 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_00785 14999237657407d858b1680d269c206f 210 Pfam PF13460 NAD(P)H-binding 8 192 3.5E-33 T 12-10-2018 IPR016040 NAD(P)-binding domain M892_15020 b4a6e91f547ee832ec005e622c0e2616 238 Pfam PF00929 Exonuclease 13 180 7.0E-37 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III M892_15020 b4a6e91f547ee832ec005e622c0e2616 238 SMART SM00479 11 189 6.4E-52 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III M892_15020 b4a6e91f547ee832ec005e622c0e2616 238 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 10 226 7.8E-81 T 12-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M892_15020 b4a6e91f547ee832ec005e622c0e2616 238 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 11 235 2.0E-94 T 12-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M892_15020 b4a6e91f547ee832ec005e622c0e2616 238 SUPERFAMILY SSF53098 9 190 1.48E-53 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_15020 b4a6e91f547ee832ec005e622c0e2616 238 Gene3D G3DSA:3.30.420.10 4 194 3.8E-57 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M892_06865 222bf060029393f461321c1d2257d7c5 339 Gene3D G3DSA:1.20.272.10 213 337 6.5E-38 T 12-10-2018 M892_06865 222bf060029393f461321c1d2257d7c5 339 Gene3D G3DSA:3.40.50.300 1 139 8.7E-49 T 12-10-2018 M892_06865 222bf060029393f461321c1d2257d7c5 339 Pfam PF06144 DNA polymerase III, delta subunit 20 189 5.5E-45 T 12-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 M892_06865 222bf060029393f461321c1d2257d7c5 339 Gene3D G3DSA:1.10.8.60 143 212 5.9E-20 T 12-10-2018 M892_06865 222bf060029393f461321c1d2257d7c5 339 SUPERFAMILY SSF52540 1 208 8.5E-50 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_06865 222bf060029393f461321c1d2257d7c5 339 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 214 332 3.5E-32 T 12-10-2018 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M892_06865 222bf060029393f461321c1d2257d7c5 339 SUPERFAMILY SSF48019 211 331 3.23E-29 T 12-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 M892_06865 222bf060029393f461321c1d2257d7c5 339 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 17 331 5.6E-102 T 12-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 M892_06430 262c79a6c98b3981b6fdcff4eec9f5b0 284 Pfam PF00085 Thioredoxin 6 109 1.4E-15 T 12-10-2018 IPR013766 Thioredoxin domain GO:0045454 M892_06430 262c79a6c98b3981b6fdcff4eec9f5b0 284 SUPERFAMILY SSF48452 112 246 6.25E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_06430 262c79a6c98b3981b6fdcff4eec9f5b0 284 SUPERFAMILY SSF52833 3 111 1.69E-26 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M892_06430 262c79a6c98b3981b6fdcff4eec9f5b0 284 Gene3D G3DSA:1.25.40.10 197 284 1.8E-24 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_06430 262c79a6c98b3981b6fdcff4eec9f5b0 284 Pfam PF14559 Tetratricopeptide repeat 124 190 4.1E-15 T 12-10-2018 M892_06430 262c79a6c98b3981b6fdcff4eec9f5b0 284 Gene3D G3DSA:3.40.30.10 2 111 3.7E-23 T 12-10-2018 M892_06430 262c79a6c98b3981b6fdcff4eec9f5b0 284 Gene3D G3DSA:1.25.40.10 112 196 3.3E-23 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_06430 262c79a6c98b3981b6fdcff4eec9f5b0 284 Pfam PF14561 Tetratricopeptide repeat 195 284 4.5E-30 T 12-10-2018 M892_20330 1e05b163133b97b6317846f9129d588d 188 Gene3D G3DSA:2.60.40.420 65 188 8.3E-19 T 12-10-2018 IPR008972 Cupredoxin M892_20330 1e05b163133b97b6317846f9129d588d 188 SUPERFAMILY SSF49503 77 186 2.09E-21 T 12-10-2018 IPR008972 Cupredoxin M892_25885 37b7894f63f021103835983f4aad5c4e 491 Pfam PF03050 Transposase IS66 family 161 444 1.7E-100 T 12-10-2018 IPR004291 Transposase, IS66 M892_25885 37b7894f63f021103835983f4aad5c4e 491 Pfam PF13007 Transposase C of IS166 homeodomain 19 89 2.1E-14 T 12-10-2018 IPR024463 Transposase TnpC, homeodomain M892_25885 37b7894f63f021103835983f4aad5c4e 491 Pfam PF13817 IS66 C-terminal element 451 487 7.2E-8 T 12-10-2018 IPR039552 Transposase IS66, C-terminal M892_25885 37b7894f63f021103835983f4aad5c4e 491 Pfam PF13005 zinc-finger binding domain of transposase IS66 97 141 1.5E-16 T 12-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 M892_17840 52647531ba8a5374dffa615275729f7b 487 Pfam PF00665 Integrase core domain 243 378 5.5E-14 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 M892_17840 52647531ba8a5374dffa615275729f7b 487 Gene3D G3DSA:3.30.420.10 240 452 2.7E-24 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M892_17840 52647531ba8a5374dffa615275729f7b 487 SUPERFAMILY SSF53098 267 442 6.2E-20 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_21970 5325c4c04ca8c2678a54d9fcc72e161f 207 SMART SM00530 31 86 2.6E-13 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 M892_21970 5325c4c04ca8c2678a54d9fcc72e161f 207 Pfam PF01381 Helix-turn-helix 32 84 2.7E-12 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 M892_21970 5325c4c04ca8c2678a54d9fcc72e161f 207 Gene3D G3DSA:1.10.260.40 26 93 7.2E-16 T 12-10-2018 M892_21970 5325c4c04ca8c2678a54d9fcc72e161f 207 SUPERFAMILY SSF47413 26 90 4.29E-15 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 M892_21970 5325c4c04ca8c2678a54d9fcc72e161f 207 SUPERFAMILY SSF51182 97 204 1.34E-25 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily M892_21970 5325c4c04ca8c2678a54d9fcc72e161f 207 Gene3D G3DSA:2.60.120.10 94 205 2.3E-26 T 12-10-2018 IPR014710 RmlC-like jelly roll fold M892_21970 5325c4c04ca8c2678a54d9fcc72e161f 207 Pfam PF07883 Cupin domain 147 204 8.5E-11 T 12-10-2018 IPR013096 Cupin 2, conserved barrel M892_03840 34d48f81c042b3fc85b459ee22a012e1 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 293 1.7E-20 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M892_03840 34d48f81c042b3fc85b459ee22a012e1 295 SUPERFAMILY SSF161098 89 276 4.58E-22 T 12-10-2018 IPR035906 MetI-like superfamily M892_03840 34d48f81c042b3fc85b459ee22a012e1 295 Gene3D G3DSA:1.10.3720.10 85 291 4.7E-18 T 12-10-2018 IPR035906 MetI-like superfamily M892_03840 34d48f81c042b3fc85b459ee22a012e1 295 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 14 65 5.2E-15 T 12-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain M892_11895 1aacc99d68a55f38a625f224dca7cfba 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 24.282 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 M892_11895 1aacc99d68a55f38a625f224dca7cfba 96 SMART SM00883 2 95 5.2E-50 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 M892_11895 1aacc99d68a55f38a625f224dca7cfba 96 SUPERFAMILY SSF50129 1 96 2.24E-31 T 12-10-2018 IPR011032 GroES-like superfamily M892_11895 1aacc99d68a55f38a625f224dca7cfba 96 Gene3D G3DSA:2.30.33.40 1 96 2.6E-36 T 12-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 M892_11895 1aacc99d68a55f38a625f224dca7cfba 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 95 1.7E-31 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 M892_11895 1aacc99d68a55f38a625f224dca7cfba 96 PRINTS PR00297 10kDa chaperonin signature 25 46 3.7E-27 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 M892_11895 1aacc99d68a55f38a625f224dca7cfba 96 PRINTS PR00297 10kDa chaperonin signature 3 18 3.7E-27 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 M892_11895 1aacc99d68a55f38a625f224dca7cfba 96 PRINTS PR00297 10kDa chaperonin signature 60 72 3.7E-27 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 M892_11895 1aacc99d68a55f38a625f224dca7cfba 96 PRINTS PR00297 10kDa chaperonin signature 82 95 3.7E-27 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 M892_11895 1aacc99d68a55f38a625f224dca7cfba 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 12-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 M892_22085 d9879e817204c08ad7724e18b8b43d47 1053 SUPERFAMILY SSF51055 995 1052 1.57E-14 T 12-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 M892_22085 d9879e817204c08ad7724e18b8b43d47 1053 Gene3D G3DSA:2.60.40.10 97 188 9.5E-24 T 12-10-2018 IPR013783 Immunoglobulin-like fold M892_22085 d9879e817204c08ad7724e18b8b43d47 1053 SMART SM00495 37 82 2.3E-14 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 M892_22085 d9879e817204c08ad7724e18b8b43d47 1053 SMART SM00495 1008 1050 7.5E-10 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 M892_22085 d9879e817204c08ad7724e18b8b43d47 1053 SUPERFAMILY SSF51445 315 785 9.94E-75 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily M892_22085 d9879e817204c08ad7724e18b8b43d47 1053 Gene3D G3DSA:3.10.50.10 677 752 7.1E-14 T 12-10-2018 IPR029070 Chitinase insertion domain superfamily M892_22085 d9879e817204c08ad7724e18b8b43d47 1053 Gene3D G3DSA:2.10.10.20 16 87 1.4E-16 T 12-10-2018 M892_22085 d9879e817204c08ad7724e18b8b43d47 1053 Pfam PF00704 Glycosyl hydrolases family 18 322 781 1.7E-85 T 12-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 M892_22085 d9879e817204c08ad7724e18b8b43d47 1053 Pfam PF14600 Cellulose-binding domain 998 1050 3.0E-16 T 12-10-2018 IPR032798 Endoglucanase Z, cellulose-binding domain KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 M892_22085 d9879e817204c08ad7724e18b8b43d47 1053 Gene3D G3DSA:3.20.20.80 305 649 6.1E-80 T 12-10-2018 M892_22085 d9879e817204c08ad7724e18b8b43d47 1053 SUPERFAMILY SSF51055 22 86 1.1E-17 T 12-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 M892_22085 d9879e817204c08ad7724e18b8b43d47 1053 Gene3D G3DSA:2.60.40.10 193 285 1.5E-19 T 12-10-2018 IPR013783 Immunoglobulin-like fold M892_22085 d9879e817204c08ad7724e18b8b43d47 1053 Gene3D G3DSA:3.20.20.80 753 781 7.1E-14 T 12-10-2018 M892_22085 d9879e817204c08ad7724e18b8b43d47 1053 SUPERFAMILY SSF54556 628 751 1.14E-14 T 12-10-2018 IPR029070 Chitinase insertion domain superfamily M892_22085 d9879e817204c08ad7724e18b8b43d47 1053 SMART SM00636 321 781 5.1E-121 T 12-10-2018 IPR011583 Chitinase II GO:0008061 M892_22085 d9879e817204c08ad7724e18b8b43d47 1053 ProSitePatterns PS01095 Chitinases family 18 active site. 470 478 - T 12-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 M892_22085 d9879e817204c08ad7724e18b8b43d47 1053 Gene3D G3DSA:2.10.10.20 993 1052 2.2E-19 T 12-10-2018 M892_22085 d9879e817204c08ad7724e18b8b43d47 1053 Pfam PF06483 Chitinase C 809 974 1.8E-71 T 12-10-2018 IPR009470 Chitinase, C-terminal KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 M892_27850 e830482500034f36701d9d401683423b 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 9.1E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_27850 e830482500034f36701d9d401683423b 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 9.1E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_27850 e830482500034f36701d9d401683423b 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 9.1E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_27850 e830482500034f36701d9d401683423b 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 5.6E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_27850 e830482500034f36701d9d401683423b 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 5.6E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_27850 e830482500034f36701d9d401683423b 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 5.6E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_27850 e830482500034f36701d9d401683423b 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 5.6E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_27850 e830482500034f36701d9d401683423b 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 5.6E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_27850 e830482500034f36701d9d401683423b 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 5.6E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_27850 e830482500034f36701d9d401683423b 256 SUPERFAMILY SSF51735 7 253 1.5E-68 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_27850 e830482500034f36701d9d401683423b 256 Gene3D G3DSA:3.40.50.720 4 254 5.9E-66 T 12-10-2018 M892_27850 e830482500034f36701d9d401683423b 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 251 2.5E-49 T 12-10-2018 M892_12995 562abd129d4d0c1a8c14c7acf1189a12 301 SUPERFAMILY SSF46785 8 135 4.37E-27 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_12995 562abd129d4d0c1a8c14c7acf1189a12 301 Gene3D G3DSA:1.10.10.10 4 144 5.9E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_12995 562abd129d4d0c1a8c14c7acf1189a12 301 SMART SM00347 22 121 2.9E-17 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M892_12995 562abd129d4d0c1a8c14c7acf1189a12 301 Pfam PF12802 MarR family 28 85 2.0E-13 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M892_12995 562abd129d4d0c1a8c14c7acf1189a12 301 PRINTS PR00598 Bacterial regulatory protein MarR family signature 111 131 2.6E-7 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M892_12995 562abd129d4d0c1a8c14c7acf1189a12 301 PRINTS PR00598 Bacterial regulatory protein MarR family signature 62 77 2.6E-7 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M892_12995 562abd129d4d0c1a8c14c7acf1189a12 301 PRINTS PR00598 Bacterial regulatory protein MarR family signature 81 97 2.6E-7 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M892_12995 562abd129d4d0c1a8c14c7acf1189a12 301 PRINTS PR00598 Bacterial regulatory protein MarR family signature 45 61 2.6E-7 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M892_12995 562abd129d4d0c1a8c14c7acf1189a12 301 Pfam PF00583 Acetyltransferase (GNAT) family 192 278 3.0E-13 T 12-10-2018 IPR000182 GNAT domain M892_12995 562abd129d4d0c1a8c14c7acf1189a12 301 SUPERFAMILY SSF55729 144 301 9.43E-28 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_12995 562abd129d4d0c1a8c14c7acf1189a12 301 Gene3D G3DSA:3.40.630.30 145 301 1.7E-23 T 12-10-2018 M892_12995 562abd129d4d0c1a8c14c7acf1189a12 301 ProSitePatterns PS01117 MarR-type HTH domain signature. 60 94 - T 12-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site M892_04530 684a24526c1c14268bc6460f63734dc3 322 Gene3D G3DSA:2.30.330.10 231 318 2.9E-25 T 12-10-2018 IPR036429 SpoA-like superfamily M892_04530 684a24526c1c14268bc6460f63734dc3 322 PRINTS PR01339 Type III secretion system outer membrane O protein family signature 185 195 3.1E-7 T 12-10-2018 IPR003283 Type III secretion system outer membrane, SpaO GO:0009306 M892_04530 684a24526c1c14268bc6460f63734dc3 322 PRINTS PR01339 Type III secretion system outer membrane O protein family signature 291 308 3.1E-7 T 12-10-2018 IPR003283 Type III secretion system outer membrane, SpaO GO:0009306 M892_04530 684a24526c1c14268bc6460f63734dc3 322 PRINTS PR01339 Type III secretion system outer membrane O protein family signature 247 259 3.1E-7 T 12-10-2018 IPR003283 Type III secretion system outer membrane, SpaO GO:0009306 M892_04530 684a24526c1c14268bc6460f63734dc3 322 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 247 314 1.5E-18 T 12-10-2018 IPR001543 Surface presentation of antigen (SpoA) M892_04530 684a24526c1c14268bc6460f63734dc3 322 SUPERFAMILY SSF101801 164 224 5.36E-7 T 12-10-2018 IPR036429 SpoA-like superfamily M892_04530 684a24526c1c14268bc6460f63734dc3 322 SUPERFAMILY SSF101801 243 319 1.23E-17 T 12-10-2018 IPR036429 SpoA-like superfamily M892_04530 684a24526c1c14268bc6460f63734dc3 322 TIGRFAM TIGR02551 SpaO_YscQ: type III secretion apparatus protein, YscQ/HrcQ family 39 314 6.5E-59 T 12-10-2018 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO GO:0030254 M892_27520 0669e06d925c5103d0073762e9491e8d 270 Gene3D G3DSA:1.10.10.60 217 269 6.3E-15 T 12-10-2018 M892_27520 0669e06d925c5103d0073762e9491e8d 270 Pfam PF12833 Helix-turn-helix domain 189 267 4.7E-18 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M892_27520 0669e06d925c5103d0073762e9491e8d 270 SUPERFAMILY SSF51215 30 133 4.32E-5 T 12-10-2018 IPR037923 Transcription regulator HTH-like M892_27520 0669e06d925c5103d0073762e9491e8d 270 Gene3D G3DSA:1.10.10.60 169 216 2.3E-10 T 12-10-2018 M892_27520 0669e06d925c5103d0073762e9491e8d 270 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 235 250 3.5E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 M892_27520 0669e06d925c5103d0073762e9491e8d 270 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 250 266 3.5E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 M892_27520 0669e06d925c5103d0073762e9491e8d 270 SMART SM00342 183 266 8.9E-28 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M892_27520 0669e06d925c5103d0073762e9491e8d 270 SUPERFAMILY SSF46689 170 216 3.67E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_27520 0669e06d925c5103d0073762e9491e8d 270 SUPERFAMILY SSF46689 220 268 2.64E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_24080 d1cf7e510d306b2c2dfdc2ffca5c348b 534 Gene3D G3DSA:3.90.226.10 1 269 2.9E-94 T 12-10-2018 M892_24080 d1cf7e510d306b2c2dfdc2ffca5c348b 534 Pfam PF01039 Carboxyl transferase domain 48 524 3.5E-149 T 12-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 M892_24080 d1cf7e510d306b2c2dfdc2ffca5c348b 534 Gene3D G3DSA:3.90.226.10 272 534 1.6E-99 T 12-10-2018 M892_24080 d1cf7e510d306b2c2dfdc2ffca5c348b 534 SUPERFAMILY SSF52096 237 517 2.84E-84 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily M892_24080 d1cf7e510d306b2c2dfdc2ffca5c348b 534 SUPERFAMILY SSF52096 23 269 5.13E-71 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily M892_07580 26eaef59016c7c4a7bf299c920da0a1d 321 SMART SM00530 19 80 3.5E-4 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 M892_07580 26eaef59016c7c4a7bf299c920da0a1d 321 Pfam PF13413 Helix-turn-helix domain 20 78 1.2E-18 T 12-10-2018 M892_07580 26eaef59016c7c4a7bf299c920da0a1d 321 SUPERFAMILY SSF47413 13 78 1.13E-7 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 M892_07580 26eaef59016c7c4a7bf299c920da0a1d 321 Gene3D G3DSA:1.10.260.40 8 117 3.8E-24 T 12-10-2018 M892_07580 26eaef59016c7c4a7bf299c920da0a1d 321 Pfam PF13464 Domain of unknown function (DUF4115) 246 319 7.0E-26 T 12-10-2018 IPR025194 Domain of unknown function DUF4115 M892_08030 4bce819e6d1900b017be34695f83a846 296 SUPERFAMILY SSF46785 2 85 1.27E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_08030 4bce819e6d1900b017be34695f83a846 296 Gene3D G3DSA:1.10.10.10 4 92 8.6E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_08030 4bce819e6d1900b017be34695f83a846 296 Pfam PF03466 LysR substrate binding domain 96 288 6.5E-13 T 12-10-2018 IPR005119 LysR, substrate-binding M892_08030 4bce819e6d1900b017be34695f83a846 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 5.6E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_08030 4bce819e6d1900b017be34695f83a846 296 Gene3D G3DSA:3.40.190.290 95 293 3.9E-9 T 12-10-2018 M892_08030 4bce819e6d1900b017be34695f83a846 296 SUPERFAMILY SSF53850 90 288 1.1E-25 T 12-10-2018 M892_20900 b662c2d06292b20ac3660ff93aac85f9 334 SMART SM00448 3 115 3.8E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_20900 b662c2d06292b20ac3660ff93aac85f9 334 SUPERFAMILY SSF103039 140 329 1.01E-37 T 12-10-2018 IPR028976 CheC-like superfamily M892_20900 b662c2d06292b20ac3660ff93aac85f9 334 Pfam PF00072 Response regulator receiver domain 5 115 7.2E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_20900 b662c2d06292b20ac3660ff93aac85f9 334 Gene3D G3DSA:3.40.1550.10 139 328 3.5E-30 T 12-10-2018 IPR028976 CheC-like superfamily M892_20900 b662c2d06292b20ac3660ff93aac85f9 334 Gene3D G3DSA:3.40.50.2300 2 126 8.8E-29 T 12-10-2018 M892_20900 b662c2d06292b20ac3660ff93aac85f9 334 SUPERFAMILY SSF52172 4 120 3.56E-29 T 12-10-2018 IPR011006 CheY-like superfamily M892_15465 df4fb4b87d95106b2bfef449322404ba 925 Pfam PF16187 Middle or third domain of peptidase_M16 366 641 3.1E-79 T 12-10-2018 IPR032632 Peptidase M16, middle/third domain M892_15465 df4fb4b87d95106b2bfef449322404ba 925 Pfam PF00675 Insulinase (Peptidase family M16) 21 158 2.4E-39 T 12-10-2018 IPR011765 Peptidase M16, N-terminal M892_15465 df4fb4b87d95106b2bfef449322404ba 925 SUPERFAMILY SSF63411 232 468 8.03E-80 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 M892_15465 df4fb4b87d95106b2bfef449322404ba 925 Gene3D G3DSA:3.30.830.10 470 852 2.6E-107 T 12-10-2018 M892_15465 df4fb4b87d95106b2bfef449322404ba 925 SUPERFAMILY SSF63411 4 226 5.59E-59 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 M892_15465 df4fb4b87d95106b2bfef449322404ba 925 Gene3D G3DSA:3.30.830.10 1 228 1.2E-86 T 12-10-2018 M892_15465 df4fb4b87d95106b2bfef449322404ba 925 SUPERFAMILY SSF63411 703 903 4.44E-45 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 M892_15465 df4fb4b87d95106b2bfef449322404ba 925 Gene3D G3DSA:3.30.830.10 239 468 2.5E-71 T 12-10-2018 M892_15465 df4fb4b87d95106b2bfef449322404ba 925 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 42 65 - T 12-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 M892_15465 df4fb4b87d95106b2bfef449322404ba 925 SUPERFAMILY SSF63411 470 693 1.17E-57 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 M892_15465 df4fb4b87d95106b2bfef449322404ba 925 Pfam PF05193 Peptidase M16 inactive domain 648 823 4.1E-8 T 12-10-2018 IPR007863 Peptidase M16, C-terminal M892_15465 df4fb4b87d95106b2bfef449322404ba 925 Pfam PF05193 Peptidase M16 inactive domain 182 354 3.5E-25 T 12-10-2018 IPR007863 Peptidase M16, C-terminal M892_15465 df4fb4b87d95106b2bfef449322404ba 925 Gene3D G3DSA:3.30.830.10 618 877 2.6E-107 T 12-10-2018 M892_01545 04980a94da0a5566eb1be6f0afd55f07 1169 SUPERFAMILY SSF141072 287 406 4.84E-14 T 12-10-2018 IPR038081 CalX-like domain superfamily M892_01545 04980a94da0a5566eb1be6f0afd55f07 1169 SUPERFAMILY SSF141072 147 270 3.53E-12 T 12-10-2018 IPR038081 CalX-like domain superfamily M892_01545 04980a94da0a5566eb1be6f0afd55f07 1169 SUPERFAMILY SSF141072 819 946 7.98E-12 T 12-10-2018 IPR038081 CalX-like domain superfamily M892_01545 04980a94da0a5566eb1be6f0afd55f07 1169 Gene3D G3DSA:2.60.40.2030 285 422 5.3E-9 T 12-10-2018 IPR038081 CalX-like domain superfamily M892_01545 04980a94da0a5566eb1be6f0afd55f07 1169 Pfam PF03160 Calx-beta domain 412 520 7.5E-6 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 M892_01545 04980a94da0a5566eb1be6f0afd55f07 1169 Pfam PF03160 Calx-beta domain 806 908 8.7E-4 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 M892_01545 04980a94da0a5566eb1be6f0afd55f07 1169 Pfam PF03160 Calx-beta domain 157 250 5.9E-5 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 M892_01545 04980a94da0a5566eb1be6f0afd55f07 1169 Pfam PF03160 Calx-beta domain 278 345 9.1E-7 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 M892_01545 04980a94da0a5566eb1be6f0afd55f07 1169 Pfam PF03160 Calx-beta domain 358 386 0.58 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 M892_01545 04980a94da0a5566eb1be6f0afd55f07 1169 Pfam PF03160 Calx-beta domain 935 1036 0.0034 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 M892_01545 04980a94da0a5566eb1be6f0afd55f07 1169 Pfam PF03160 Calx-beta domain 678 779 0.0021 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 M892_01545 04980a94da0a5566eb1be6f0afd55f07 1169 Pfam PF03160 Calx-beta domain 549 650 0.017 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 M892_01545 04980a94da0a5566eb1be6f0afd55f07 1169 Gene3D G3DSA:2.60.40.2030 423 541 1.0E-7 T 12-10-2018 IPR038081 CalX-like domain superfamily M892_01545 04980a94da0a5566eb1be6f0afd55f07 1169 Gene3D G3DSA:2.60.40.2030 813 928 4.3E-5 T 12-10-2018 IPR038081 CalX-like domain superfamily M892_01545 04980a94da0a5566eb1be6f0afd55f07 1169 Gene3D G3DSA:2.60.40.2030 684 799 3.7E-5 T 12-10-2018 IPR038081 CalX-like domain superfamily M892_01545 04980a94da0a5566eb1be6f0afd55f07 1169 SUPERFAMILY SSF141072 948 1059 2.22E-11 T 12-10-2018 IPR038081 CalX-like domain superfamily M892_01545 04980a94da0a5566eb1be6f0afd55f07 1169 SUPERFAMILY SSF141072 561 688 6.67E-13 T 12-10-2018 IPR038081 CalX-like domain superfamily M892_01545 04980a94da0a5566eb1be6f0afd55f07 1169 SUPERFAMILY SSF141072 691 817 1.7E-11 T 12-10-2018 IPR038081 CalX-like domain superfamily M892_01545 04980a94da0a5566eb1be6f0afd55f07 1169 SUPERFAMILY SSF141072 421 583 4.05E-14 T 12-10-2018 IPR038081 CalX-like domain superfamily M892_01545 04980a94da0a5566eb1be6f0afd55f07 1169 Gene3D G3DSA:2.60.40.2030 154 280 2.0E-9 T 12-10-2018 IPR038081 CalX-like domain superfamily M892_16810 89e5b2e5c77e3753260b93f0202abe2d 256 Pfam PF08238 Sel1 repeat 79 114 1.0E-10 T 12-10-2018 IPR006597 Sel1-like repeat M892_16810 89e5b2e5c77e3753260b93f0202abe2d 256 Pfam PF08238 Sel1 repeat 184 216 1.1E-6 T 12-10-2018 IPR006597 Sel1-like repeat M892_16810 89e5b2e5c77e3753260b93f0202abe2d 256 Pfam PF08238 Sel1 repeat 116 145 7.8E-7 T 12-10-2018 IPR006597 Sel1-like repeat M892_16810 89e5b2e5c77e3753260b93f0202abe2d 256 Pfam PF08238 Sel1 repeat 147 181 4.0E-11 T 12-10-2018 IPR006597 Sel1-like repeat M892_16810 89e5b2e5c77e3753260b93f0202abe2d 256 Pfam PF08238 Sel1 repeat 7 41 1.3E-11 T 12-10-2018 IPR006597 Sel1-like repeat M892_16810 89e5b2e5c77e3753260b93f0202abe2d 256 Pfam PF08238 Sel1 repeat 45 77 3.8E-12 T 12-10-2018 IPR006597 Sel1-like repeat M892_16810 89e5b2e5c77e3753260b93f0202abe2d 256 SUPERFAMILY SSF81901 2 125 3.66E-39 T 12-10-2018 M892_16810 89e5b2e5c77e3753260b93f0202abe2d 256 SMART SM00671 43 78 1.8E-13 T 12-10-2018 IPR006597 Sel1-like repeat M892_16810 89e5b2e5c77e3753260b93f0202abe2d 256 SMART SM00671 147 182 9.1E-12 T 12-10-2018 IPR006597 Sel1-like repeat M892_16810 89e5b2e5c77e3753260b93f0202abe2d 256 SMART SM00671 79 114 2.7E-13 T 12-10-2018 IPR006597 Sel1-like repeat M892_16810 89e5b2e5c77e3753260b93f0202abe2d 256 SMART SM00671 7 42 7.6E-12 T 12-10-2018 IPR006597 Sel1-like repeat M892_16810 89e5b2e5c77e3753260b93f0202abe2d 256 SMART SM00671 115 146 3.6E-8 T 12-10-2018 IPR006597 Sel1-like repeat M892_16810 89e5b2e5c77e3753260b93f0202abe2d 256 SMART SM00671 183 218 1.4E-7 T 12-10-2018 IPR006597 Sel1-like repeat M892_16810 89e5b2e5c77e3753260b93f0202abe2d 256 Gene3D G3DSA:1.25.40.10 1 116 5.1E-48 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_16810 89e5b2e5c77e3753260b93f0202abe2d 256 Gene3D G3DSA:1.25.40.10 125 255 4.0E-36 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_16810 89e5b2e5c77e3753260b93f0202abe2d 256 SUPERFAMILY SSF81901 128 252 1.19E-30 T 12-10-2018 M892_18135 41cafaf41f816c8177965d0bee0efccc 341 Gene3D G3DSA:2.40.30.170 223 340 7.6E-34 T 12-10-2018 M892_18135 41cafaf41f816c8177965d0bee0efccc 341 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 52 284 3.5E-13 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain M892_18135 41cafaf41f816c8177965d0bee0efccc 341 SUPERFAMILY SSF111369 119 174 3.14E-6 T 12-10-2018 M892_18135 41cafaf41f816c8177965d0bee0efccc 341 Gene3D G3DSA:2.40.50.100 54 86 7.1E-10 T 12-10-2018 M892_18135 41cafaf41f816c8177965d0bee0efccc 341 Gene3D G3DSA:1.10.287.470 116 173 3.9E-5 T 12-10-2018 M892_18135 41cafaf41f816c8177965d0bee0efccc 341 Gene3D G3DSA:1.10.287.470 87 114 7.1E-10 T 12-10-2018 M892_18135 41cafaf41f816c8177965d0bee0efccc 341 SUPERFAMILY SSF111369 185 264 4.05E-12 T 12-10-2018 M892_18135 41cafaf41f816c8177965d0bee0efccc 341 SUPERFAMILY SSF111369 52 128 6.93E-9 T 12-10-2018 M892_07375 d935bd32970bb175f9715d14efcededf 778 SUPERFAMILY SSF52540 520 753 7.43E-23 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_07375 d935bd32970bb175f9715d14efcededf 778 Gene3D G3DSA:3.40.50.300 407 583 9.1E-39 T 12-10-2018 M892_07375 d935bd32970bb175f9715d14efcededf 778 SMART SM00487 411 587 2.9E-21 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain M892_07375 d935bd32970bb175f9715d14efcededf 778 SUPERFAMILY SSF52540 324 570 8.73E-39 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_07375 d935bd32970bb175f9715d14efcededf 778 Gene3D G3DSA:3.40.50.300 593 776 4.9E-32 T 12-10-2018 M892_07375 d935bd32970bb175f9715d14efcededf 778 Pfam PF04851 Type III restriction enzyme, res subunit 415 557 5.0E-21 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 M892_07375 d935bd32970bb175f9715d14efcededf 778 Pfam PF00271 Helicase conserved C-terminal domain 627 730 4.2E-8 T 12-10-2018 IPR001650 Helicase, C-terminal M892_18370 1518d3b403fa51617581d9126f4e6947 263 Gene3D G3DSA:3.40.1190.20 1 263 8.9E-91 T 12-10-2018 IPR029056 Ribokinase-like M892_18370 1518d3b403fa51617581d9126f4e6947 263 PIRSF PIRSF000513 4 263 5.1E-98 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 M892_18370 1518d3b403fa51617581d9126f4e6947 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 88 105 4.8E-34 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 M892_18370 1518d3b403fa51617581d9126f4e6947 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 119 133 4.8E-34 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 M892_18370 1518d3b403fa51617581d9126f4e6947 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 163 180 4.8E-34 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 M892_18370 1518d3b403fa51617581d9126f4e6947 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 18 25 4.8E-34 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 M892_18370 1518d3b403fa51617581d9126f4e6947 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 62 70 4.8E-34 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 M892_18370 1518d3b403fa51617581d9126f4e6947 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 31 52 4.8E-34 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 M892_18370 1518d3b403fa51617581d9126f4e6947 263 SUPERFAMILY SSF53613 6 260 3.43E-61 T 12-10-2018 IPR029056 Ribokinase-like M892_18370 1518d3b403fa51617581d9126f4e6947 263 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 12 255 30.03 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 M892_18370 1518d3b403fa51617581d9126f4e6947 263 Pfam PF02110 Hydroxyethylthiazole kinase family 10 252 1.1E-71 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 M892_26740 630ef7bb3797e25057d78362b688b9ab 368 Pfam PF08402 TOBE domain 279 354 1.2E-4 T 12-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 M892_26740 630ef7bb3797e25057d78362b688b9ab 368 Gene3D G3DSA:2.40.50.940 226 355 1.3E-16 T 12-10-2018 M892_26740 630ef7bb3797e25057d78362b688b9ab 368 Pfam PF00005 ABC transporter 23 165 1.8E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_26740 630ef7bb3797e25057d78362b688b9ab 368 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_26740 630ef7bb3797e25057d78362b688b9ab 368 SUPERFAMILY SSF50331 240 357 6.46E-12 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal M892_26740 630ef7bb3797e25057d78362b688b9ab 368 SUPERFAMILY SSF52540 8 247 4.92E-86 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_26740 630ef7bb3797e25057d78362b688b9ab 368 Gene3D G3DSA:3.40.50.300 7 225 8.6E-69 T 12-10-2018 M892_26740 630ef7bb3797e25057d78362b688b9ab 368 Gene3D G3DSA:2.40.50.140 286 349 1.3E-16 T 12-10-2018 M892_26740 630ef7bb3797e25057d78362b688b9ab 368 SMART SM00382 32 215 1.8E-20 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_26740 630ef7bb3797e25057d78362b688b9ab 368 TIGRFAM TIGR03265 PhnT2: putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein 5 358 3.4E-163 T 12-10-2018 IPR017666 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT2 GO:0005524 M892_24960 a0ea6df5e09f4efa740d069121b4c8a7 288 Gene3D G3DSA:1.10.10.10 2 89 1.2E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_24960 a0ea6df5e09f4efa740d069121b4c8a7 288 SUPERFAMILY SSF53850 92 282 1.81E-19 T 12-10-2018 M892_24960 a0ea6df5e09f4efa740d069121b4c8a7 288 SUPERFAMILY SSF46785 3 112 1.92E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_24960 a0ea6df5e09f4efa740d069121b4c8a7 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 2.1E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_24960 a0ea6df5e09f4efa740d069121b4c8a7 288 Pfam PF03466 LysR substrate binding domain 88 278 1.1E-17 T 12-10-2018 IPR005119 LysR, substrate-binding M892_24960 a0ea6df5e09f4efa740d069121b4c8a7 288 Gene3D G3DSA:3.40.190.290 91 278 3.2E-28 T 12-10-2018 M892_02695 d196279a0abd4de3e961d91bcd82a3ad 457 Gene3D G3DSA:1.10.3860.10 4 457 1.5E-98 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 M892_02695 d196279a0abd4de3e961d91bcd82a3ad 457 SUPERFAMILY SSF118215 29 441 3.27E-92 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 M892_02695 d196279a0abd4de3e961d91bcd82a3ad 457 PRINTS PR00173 Glutamate-aspartate symporter signature 369 388 1.6E-32 T 12-10-2018 M892_02695 d196279a0abd4de3e961d91bcd82a3ad 457 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 1.6E-32 T 12-10-2018 M892_02695 d196279a0abd4de3e961d91bcd82a3ad 457 PRINTS PR00173 Glutamate-aspartate symporter signature 181 203 1.6E-32 T 12-10-2018 M892_02695 d196279a0abd4de3e961d91bcd82a3ad 457 PRINTS PR00173 Glutamate-aspartate symporter signature 396 416 1.6E-32 T 12-10-2018 M892_02695 d196279a0abd4de3e961d91bcd82a3ad 457 PRINTS PR00173 Glutamate-aspartate symporter signature 27 47 1.6E-32 T 12-10-2018 M892_02695 d196279a0abd4de3e961d91bcd82a3ad 457 PRINTS PR00173 Glutamate-aspartate symporter signature 259 278 1.6E-32 T 12-10-2018 M892_02695 d196279a0abd4de3e961d91bcd82a3ad 457 PRINTS PR00173 Glutamate-aspartate symporter signature 105 130 1.6E-32 T 12-10-2018 M892_02695 d196279a0abd4de3e961d91bcd82a3ad 457 Pfam PF00375 Sodium:dicarboxylate symporter family 32 441 3.3E-100 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 M892_15135 a8947e608fbaad5f0b9085d9f467e5d2 339 PIRSF PIRSF026343 4 339 8.2E-116 T 12-10-2018 IPR014524 Outer membrane protein assembly factor BamC M892_15135 a8947e608fbaad5f0b9085d9f467e5d2 339 Pfam PF06804 NlpB/DapX lipoprotein 35 336 6.8E-103 T 12-10-2018 IPR010653 NlpB/DapX lipoprotein M892_15135 a8947e608fbaad5f0b9085d9f467e5d2 339 Gene3D G3DSA:3.30.530.50 97 207 2.4E-12 T 12-10-2018 M892_15135 a8947e608fbaad5f0b9085d9f467e5d2 339 Hamap MF_00924 Outer membrane protein assembly factor BamC [bamC]. 4 338 33.357 T 12-10-2018 IPR014524 Outer membrane protein assembly factor BamC M892_15135 a8947e608fbaad5f0b9085d9f467e5d2 339 Gene3D G3DSA:3.30.310.170 221 339 2.6E-41 T 12-10-2018 M892_08710 711f4f3525338c9187d8f5e0159a7894 650 Gene3D G3DSA:3.40.50.2300 372 476 2.9E-36 T 12-10-2018 M892_08710 711f4f3525338c9187d8f5e0159a7894 650 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 9 345 3.9E-169 T 12-10-2018 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.197 M892_08710 711f4f3525338c9187d8f5e0159a7894 650 Pfam PF02378 Phosphotransferase system, EIIC 18 278 2.0E-19 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 M892_08710 711f4f3525338c9187d8f5e0159a7894 650 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 550 566 - T 12-10-2018 IPR002178 PTS EIIA type-2 domain M892_08710 711f4f3525338c9187d8f5e0159a7894 650 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 386 467 6.8E-12 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 M892_08710 711f4f3525338c9187d8f5e0159a7894 650 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 507 644 8.3E-34 T 12-10-2018 IPR002178 PTS EIIA type-2 domain M892_08710 711f4f3525338c9187d8f5e0159a7894 650 SUPERFAMILY SSF52794 385 472 2.75E-25 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 M892_08710 711f4f3525338c9187d8f5e0159a7894 650 SUPERFAMILY SSF55804 506 645 1.57E-40 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 M892_08710 711f4f3525338c9187d8f5e0159a7894 650 Gene3D G3DSA:3.40.930.10 502 647 6.7E-51 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 M892_12740 381325e47df5a5d73ffc0b7b2d0f0acf 151 SUPERFAMILY SSF54523 7 49 1.49E-12 T 12-10-2018 M892_12740 381325e47df5a5d73ffc0b7b2d0f0acf 151 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M892_12740 381325e47df5a5d73ffc0b7b2d0f0acf 151 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 26 7.0E-8 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M892_12740 381325e47df5a5d73ffc0b7b2d0f0acf 151 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 2.0E-9 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M892_12740 381325e47df5a5d73ffc0b7b2d0f0acf 151 Gene3D G3DSA:3.30.700.10 7 151 4.8E-13 T 12-10-2018 M892_28560 7affba6f68ba34a6c7aba3cd32962769 255 Gene3D G3DSA:3.40.50.300 1 254 9.6E-58 T 12-10-2018 M892_28560 7affba6f68ba34a6c7aba3cd32962769 255 SUPERFAMILY SSF52540 2 254 3.75E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_28560 7affba6f68ba34a6c7aba3cd32962769 255 Pfam PF13614 AAA domain 3 181 6.0E-46 T 12-10-2018 IPR025669 AAA domain M892_28560 7affba6f68ba34a6c7aba3cd32962769 255 PIRSF PIRSF009320 96 243 4.7E-10 T 12-10-2018 M892_28560 7affba6f68ba34a6c7aba3cd32962769 255 PIRSF PIRSF009320 3 75 7.8E-12 T 12-10-2018 M892_24325 e40fe82879c20f71ba7d1fb94f1d8869 382 Gene3D G3DSA:1.20.1090.10 184 382 1.5E-78 T 12-10-2018 M892_24325 e40fe82879c20f71ba7d1fb94f1d8869 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 374 5.8E-128 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 M892_24325 e40fe82879c20f71ba7d1fb94f1d8869 382 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 259 279 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 M892_24325 e40fe82879c20f71ba7d1fb94f1d8869 382 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 172 200 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 M892_24325 e40fe82879c20f71ba7d1fb94f1d8869 382 SUPERFAMILY SSF56796 5 381 9.42E-138 T 12-10-2018 M892_24325 e40fe82879c20f71ba7d1fb94f1d8869 382 Gene3D G3DSA:3.40.50.1970 2 183 3.1E-57 T 12-10-2018 M892_00935 1c2d02021771273c7144b529327c0128 160 Gene3D G3DSA:2.40.160.20 19 160 2.3E-24 T 12-10-2018 M892_00935 1c2d02021771273c7144b529327c0128 160 Pfam PF13505 Outer membrane protein beta-barrel domain 6 159 6.9E-18 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel M892_00935 1c2d02021771273c7144b529327c0128 160 SUPERFAMILY SSF56925 18 159 1.62E-20 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel M892_04390 2e2074d804af90d000f03e1a1cd9fc77 1053 SUPERFAMILY SSF82866 831 1026 1.57E-41 T 12-10-2018 M892_04390 2e2074d804af90d000f03e1a1cd9fc77 1053 SUPERFAMILY SSF82714 182 272 2.88E-20 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M892_04390 2e2074d804af90d000f03e1a1cd9fc77 1053 SUPERFAMILY SSF82866 296 497 1.96E-46 T 12-10-2018 M892_04390 2e2074d804af90d000f03e1a1cd9fc77 1053 Gene3D G3DSA:3.30.70.1430 567 668 0.0 T 12-10-2018 M892_04390 2e2074d804af90d000f03e1a1cd9fc77 1053 Pfam PF00873 AcrB/AcrD/AcrF family 1 1025 0.0 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_04390 2e2074d804af90d000f03e1a1cd9fc77 1053 Gene3D G3DSA:1.20.1640.10 513 1022 0.0 T 12-10-2018 M892_04390 2e2074d804af90d000f03e1a1cd9fc77 1053 Gene3D G3DSA:3.30.70.1440 669 865 0.0 T 12-10-2018 M892_04390 2e2074d804af90d000f03e1a1cd9fc77 1053 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 7.5E-108 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_04390 2e2074d804af90d000f03e1a1cd9fc77 1053 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 7.5E-108 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_04390 2e2074d804af90d000f03e1a1cd9fc77 1053 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 7.5E-108 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_04390 2e2074d804af90d000f03e1a1cd9fc77 1053 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 7.5E-108 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_04390 2e2074d804af90d000f03e1a1cd9fc77 1053 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 7.5E-108 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_04390 2e2074d804af90d000f03e1a1cd9fc77 1053 PRINTS PR00702 Acriflavin resistance protein family signature 621 635 7.5E-108 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_04390 2e2074d804af90d000f03e1a1cd9fc77 1053 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 7.5E-108 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_04390 2e2074d804af90d000f03e1a1cd9fc77 1053 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 7.5E-108 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_04390 2e2074d804af90d000f03e1a1cd9fc77 1053 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 7.5E-108 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_04390 2e2074d804af90d000f03e1a1cd9fc77 1053 Gene3D G3DSA:1.20.1640.10 8 512 0.0 T 12-10-2018 M892_04390 2e2074d804af90d000f03e1a1cd9fc77 1053 Gene3D G3DSA:3.30.70.1430 38 817 0.0 T 12-10-2018 M892_04390 2e2074d804af90d000f03e1a1cd9fc77 1053 Gene3D G3DSA:3.30.70.1320 133 332 0.0 T 12-10-2018 M892_04390 2e2074d804af90d000f03e1a1cd9fc77 1053 Gene3D G3DSA:3.30.2090.10 721 809 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M892_04390 2e2074d804af90d000f03e1a1cd9fc77 1053 SUPERFAMILY SSF82693 565 670 1.67E-31 T 12-10-2018 M892_04390 2e2074d804af90d000f03e1a1cd9fc77 1053 SUPERFAMILY SSF82714 722 809 1.2E-21 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M892_04390 2e2074d804af90d000f03e1a1cd9fc77 1053 SUPERFAMILY SSF82693 38 131 1.57E-23 T 12-10-2018 M892_04390 2e2074d804af90d000f03e1a1cd9fc77 1053 SUPERFAMILY SSF82693 135 330 1.5E-23 T 12-10-2018 M892_04390 2e2074d804af90d000f03e1a1cd9fc77 1053 SUPERFAMILY SSF82693 672 856 7.32E-28 T 12-10-2018 M892_04390 2e2074d804af90d000f03e1a1cd9fc77 1053 Gene3D G3DSA:3.30.2090.10 179 275 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M892_04390 2e2074d804af90d000f03e1a1cd9fc77 1053 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1044 0.0 T 12-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 M892_23645 443f35efad317f82fed71e003a010fe4 321 Gene3D G3DSA:1.10.3720.10 104 307 8.2E-23 T 12-10-2018 IPR035906 MetI-like superfamily M892_23645 443f35efad317f82fed71e003a010fe4 321 SUPERFAMILY SSF161098 105 302 3.79E-25 T 12-10-2018 IPR035906 MetI-like superfamily M892_23645 443f35efad317f82fed71e003a010fe4 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 129 299 4.2E-22 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M892_10650 7de6f4c0f9bdd02560e3af9acfaaaf80 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 38 136 1.7E-29 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 M892_10650 7de6f4c0f9bdd02560e3af9acfaaaf80 246 Gene3D G3DSA:1.10.3720.10 33 242 2.2E-56 T 12-10-2018 IPR035906 MetI-like superfamily M892_10650 7de6f4c0f9bdd02560e3af9acfaaaf80 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 60 242 1.6E-25 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M892_10650 7de6f4c0f9bdd02560e3af9acfaaaf80 246 SUPERFAMILY SSF161098 41 227 2.88E-47 T 12-10-2018 IPR035906 MetI-like superfamily M892_06755 fa1013f7201ef3ceafdfd6f27ba29c5a 285 Gene3D G3DSA:3.40.50.150 91 283 1.4E-57 T 12-10-2018 M892_06755 fa1013f7201ef3ceafdfd6f27ba29c5a 285 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 7 282 44.65 T 12-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 M892_06755 fa1013f7201ef3ceafdfd6f27ba29c5a 285 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 187 193 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 M892_06755 fa1013f7201ef3ceafdfd6f27ba29c5a 285 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 6 283 4.0E-81 T 12-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 M892_06755 fa1013f7201ef3ceafdfd6f27ba29c5a 285 Gene3D G3DSA:1.10.8.10 6 90 1.6E-25 T 12-10-2018 M892_06755 fa1013f7201ef3ceafdfd6f27ba29c5a 285 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 29 278 1.1E-91 T 12-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 M892_06755 fa1013f7201ef3ceafdfd6f27ba29c5a 285 SUPERFAMILY SSF53335 7 279 7.71E-57 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M892_06755 fa1013f7201ef3ceafdfd6f27ba29c5a 285 Pfam PF13847 Methyltransferase domain 117 251 3.6E-18 T 12-10-2018 IPR025714 Methyltransferase domain M892_14745 35581b58f8555206e7f1519877a299ea 407 SUPERFAMILY SSF63380 105 272 5.11E-35 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel M892_14745 35581b58f8555206e7f1519877a299ea 407 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 3 407 2.3E-226 T 12-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 M892_14745 35581b58f8555206e7f1519877a299ea 407 Pfam PF00175 Oxidoreductase NAD-binding domain 277 385 9.1E-16 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 M892_14745 35581b58f8555206e7f1519877a299ea 407 PIRSF PIRSF000044 1 407 2.8E-216 T 12-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 M892_14745 35581b58f8555206e7f1519877a299ea 407 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 1 407 62.254 T 12-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 M892_14745 35581b58f8555206e7f1519877a299ea 407 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 42 115 2.4E-10 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 M892_14745 35581b58f8555206e7f1519877a299ea 407 SUPERFAMILY SSF54292 35 124 2.42E-21 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 M892_14745 35581b58f8555206e7f1519877a299ea 407 Pfam PF00970 Oxidoreductase FAD-binding domain 204 266 1.2E-7 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 M892_14745 35581b58f8555206e7f1519877a299ea 407 Gene3D G3DSA:2.40.30.10 126 264 4.0E-52 T 12-10-2018 M892_14745 35581b58f8555206e7f1519877a299ea 407 Gene3D G3DSA:3.10.20.30 34 125 1.4E-31 T 12-10-2018 IPR012675 Beta-grasp domain superfamily M892_14745 35581b58f8555206e7f1519877a299ea 407 SUPERFAMILY SSF52343 258 402 2.1E-35 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain M892_14745 35581b58f8555206e7f1519877a299ea 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 276 295 1.0E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 M892_14745 35581b58f8555206e7f1519877a299ea 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 302 311 1.0E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 M892_14745 35581b58f8555206e7f1519877a299ea 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 209 216 1.0E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 M892_14745 35581b58f8555206e7f1519877a299ea 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 373 381 1.0E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 M892_14745 35581b58f8555206e7f1519877a299ea 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 242 251 1.0E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 M892_14745 35581b58f8555206e7f1519877a299ea 407 Gene3D G3DSA:3.40.50.80 275 393 4.3E-30 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain M892_15720 2936ddc5f63ee74127c43641a1bd0ebc 563 SUPERFAMILY SSF82861 304 390 7.19E-14 T 12-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 M892_15720 2936ddc5f63ee74127c43641a1bd0ebc 563 Pfam PF00924 Mechanosensitive ion channel 355 546 1.2E-54 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 M892_15720 2936ddc5f63ee74127c43641a1bd0ebc 563 Gene3D G3DSA:2.30.30.60 407 455 2.7E-18 T 12-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily M892_15720 2936ddc5f63ee74127c43641a1bd0ebc 563 Gene3D G3DSA:3.30.70.100 458 550 9.4E-27 T 12-10-2018 M892_15720 2936ddc5f63ee74127c43641a1bd0ebc 563 SUPERFAMILY SSF82689 460 556 7.72E-32 T 12-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 M892_15720 2936ddc5f63ee74127c43641a1bd0ebc 563 SUPERFAMILY SSF50182 391 457 2.26E-18 T 12-10-2018 IPR010920 LSM domain superfamily M892_09940 bec0119ea2adfb523863d3d2ff4504f5 212 Gene3D G3DSA:3.40.50.150 42 203 9.1E-12 T 12-10-2018 M892_09940 bec0119ea2adfb523863d3d2ff4504f5 212 Pfam PF13489 Methyltransferase domain 63 192 1.3E-15 T 12-10-2018 M892_09940 bec0119ea2adfb523863d3d2ff4504f5 212 SUPERFAMILY SSF53335 47 199 1.01E-17 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M892_26800 d3da012dfb5f426cdce6f8503124a16d 124 Pfam PF06803 Protein of unknown function (DUF1232) 63 98 7.2E-14 T 12-10-2018 IPR010652 Domain of unknown function DUF1232 MetaCyc: PWY-7511 M892_26800 d3da012dfb5f426cdce6f8503124a16d 124 PIRSF PIRSF031804 1 124 1.2E-39 T 12-10-2018 IPR016983 Uncharacterised conserved protein UCP031804 M892_26715 0efeb5ba45641f3340722f9899d3ca9e 303 Pfam PF04393 Protein of unknown function (DUF535) 27 298 2.3E-78 T 12-10-2018 IPR007488 Protein of unknown function DUF535 M892_25110 445de3eb87e7aa8baaa7c3ee8724c8a5 260 Pfam PF00005 ABC transporter 21 170 3.6E-26 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_25110 445de3eb87e7aa8baaa7c3ee8724c8a5 260 SMART SM00382 30 219 9.4E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_25110 445de3eb87e7aa8baaa7c3ee8724c8a5 260 SUPERFAMILY SSF52540 3 236 3.59E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_25110 445de3eb87e7aa8baaa7c3ee8724c8a5 260 Gene3D G3DSA:3.40.50.300 1 259 2.5E-63 T 12-10-2018 M892_01930 498a41526ccaa201f9512d569e388200 343 Pfam PF13416 Bacterial extracellular solute-binding protein 42 301 2.7E-37 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein M892_01930 498a41526ccaa201f9512d569e388200 343 Gene3D G3DSA:3.40.190.10 132 335 5.1E-107 T 12-10-2018 M892_01930 498a41526ccaa201f9512d569e388200 343 Gene3D G3DSA:3.40.190.10 32 306 5.1E-107 T 12-10-2018 M892_01930 498a41526ccaa201f9512d569e388200 343 SUPERFAMILY SSF53850 26 340 1.3E-84 T 12-10-2018 M892_01930 498a41526ccaa201f9512d569e388200 343 PIRSF PIRSF019574 1 343 2.5E-109 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 M892_01930 498a41526ccaa201f9512d569e388200 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 203 222 5.3E-69 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 M892_01930 498a41526ccaa201f9512d569e388200 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 91 104 5.3E-69 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 M892_01930 498a41526ccaa201f9512d569e388200 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 32 48 5.3E-69 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 M892_01930 498a41526ccaa201f9512d569e388200 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 75 89 5.3E-69 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 M892_01930 498a41526ccaa201f9512d569e388200 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 122 138 5.3E-69 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 M892_01930 498a41526ccaa201f9512d569e388200 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 166 185 5.3E-69 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 M892_01930 498a41526ccaa201f9512d569e388200 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 247 266 5.3E-69 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 M892_01930 498a41526ccaa201f9512d569e388200 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 48 69 5.3E-69 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 M892_01930 498a41526ccaa201f9512d569e388200 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 148 162 5.3E-69 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 M892_07915 03fecbda4ab3d9bc17eded3a18db9390 100 SUPERFAMILY SSF48295 2 95 9.42E-30 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 M892_07915 03fecbda4ab3d9bc17eded3a18db9390 100 TIGRFAM TIGR01321 TrpR: trp operon repressor 6 89 1.1E-25 T 12-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 M892_07915 03fecbda4ab3d9bc17eded3a18db9390 100 Gene3D G3DSA:1.10.1270.10 1 98 1.3E-33 T 12-10-2018 IPR038116 TrpR-like superfamily M892_07915 03fecbda4ab3d9bc17eded3a18db9390 100 PIRSF PIRSF003196 1 100 4.7E-40 T 12-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 M892_07915 03fecbda4ab3d9bc17eded3a18db9390 100 Pfam PF01371 Trp repressor protein 8 94 2.3E-33 T 12-10-2018 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 M892_07915 03fecbda4ab3d9bc17eded3a18db9390 100 Hamap MF_00475 Trp operon repressor [trpR]. 6 99 23.599 T 12-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 M892_07915 03fecbda4ab3d9bc17eded3a18db9390 100 ProDom PD012582 REPRESSOR TRANSCRIPTION TRP OPERON DNA-BINDING REGULATION HOMOLOG AROH FOR TRYPTOPHAN 4 79 6.0E-37 T 12-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 M892_23015 a81a4fe59d63cc392a51f937480a03c4 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 24 213 7.2E-21 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M892_23015 a81a4fe59d63cc392a51f937480a03c4 229 SUPERFAMILY SSF161098 6 217 3.79E-48 T 12-10-2018 IPR035906 MetI-like superfamily M892_23015 a81a4fe59d63cc392a51f937480a03c4 229 Gene3D G3DSA:1.10.3720.10 3 224 2.7E-58 T 12-10-2018 IPR035906 MetI-like superfamily M892_23015 a81a4fe59d63cc392a51f937480a03c4 229 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 10 219 3.9E-72 T 12-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 M892_13255 e55072d4baa3d78c203d6c267b568f6e 316 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 124 296 1.8E-80 T 12-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 M892_13255 e55072d4baa3d78c203d6c267b568f6e 316 Hamap MF_00162 Glutathione synthetase [gshB]. 1 316 178.175 T 12-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 M892_13255 e55072d4baa3d78c203d6c267b568f6e 316 Gene3D G3DSA:3.40.50.20 1 129 5.4E-53 T 12-10-2018 M892_13255 e55072d4baa3d78c203d6c267b568f6e 316 TIGRFAM TIGR01380 glut_syn: glutathione synthase 2 311 9.5E-141 T 12-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 M892_13255 e55072d4baa3d78c203d6c267b568f6e 316 Gene3D G3DSA:3.30.1490.20 137 196 1.8E-29 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 M892_13255 e55072d4baa3d78c203d6c267b568f6e 316 SUPERFAMILY SSF52440 2 122 1.09E-46 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily M892_13255 e55072d4baa3d78c203d6c267b568f6e 316 Gene3D G3DSA:3.30.470.20 197 300 1.3E-40 T 12-10-2018 M892_13255 e55072d4baa3d78c203d6c267b568f6e 316 SUPERFAMILY SSF56059 123 313 5.82E-59 T 12-10-2018 M892_13255 e55072d4baa3d78c203d6c267b568f6e 316 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 2 120 7.1E-49 T 12-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 M892_08085 9b50ba70a2cd01bc7d8b3ebb3bc0a142 344 Pfam PF00248 Aldo/keto reductase family 15 335 1.2E-74 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain M892_08085 9b50ba70a2cd01bc7d8b3ebb3bc0a142 344 Gene3D G3DSA:3.20.20.100 1 344 3.0E-135 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily M892_08085 9b50ba70a2cd01bc7d8b3ebb3bc0a142 344 SUPERFAMILY SSF51430 1 343 1.11E-109 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily M892_22545 b50ea7281d8c17e9d15e118086260ab2 461 SUPERFAMILY SSF49373 318 403 6.02E-9 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments M892_22545 b50ea7281d8c17e9d15e118086260ab2 461 Pfam PF05689 Salmonella repeat of unknown function (DUF823) 196 302 6.3E-6 T 12-10-2018 IPR008541 Protein of unknown function DUF823 M892_22545 b50ea7281d8c17e9d15e118086260ab2 461 SUPERFAMILY SSF49373 400 457 3.73E-7 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments M892_22545 b50ea7281d8c17e9d15e118086260ab2 461 Gene3D G3DSA:2.60.40.10 402 460 4.6E-7 T 12-10-2018 IPR013783 Immunoglobulin-like fold M892_22545 b50ea7281d8c17e9d15e118086260ab2 461 Gene3D G3DSA:2.60.40.10 311 401 2.5E-7 T 12-10-2018 IPR013783 Immunoglobulin-like fold M892_02730 ff3fedfdebb9cb9be09a0266d782c7fa 216 Hamap MF_00812 Thiopurine S-methyltransferase [tpm]. 2 215 35.439 T 12-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 M892_02730 ff3fedfdebb9cb9be09a0266d782c7fa 216 Gene3D G3DSA:3.40.50.150 1 216 1.7E-62 T 12-10-2018 M892_02730 ff3fedfdebb9cb9be09a0266d782c7fa 216 TIGRFAM TIGR03840 TMPT_Se_Te: thiopurine S-methyltransferase, Se/Te detoxification family 5 214 1.9E-78 T 12-10-2018 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification GO:0008119|GO:0010038|GO:0032259 KEGG: 00983+2.1.1.67 M892_02730 ff3fedfdebb9cb9be09a0266d782c7fa 216 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 3 215 5.0E-74 T 12-10-2018 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 M892_02730 ff3fedfdebb9cb9be09a0266d782c7fa 216 SUPERFAMILY SSF53335 3 214 2.53E-55 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M892_02730 ff3fedfdebb9cb9be09a0266d782c7fa 216 PIRSF PIRSF023956 1 216 5.7E-73 T 12-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 M892_02380 3deece9320577dcae40008ba35b8df6c 143 Pfam PF13673 Acetyltransferase (GNAT) domain 54 125 1.3E-15 T 12-10-2018 IPR000182 GNAT domain M892_02380 3deece9320577dcae40008ba35b8df6c 143 Gene3D G3DSA:3.40.630.30 1 143 3.7E-33 T 12-10-2018 M892_02380 3deece9320577dcae40008ba35b8df6c 143 SUPERFAMILY SSF55729 1 137 1.95E-23 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_01680 edd1277933f4a3136ce22a83b5821261 1613 SUPERFAMILY SSF53223 755 940 1.44E-25 T 12-10-2018 M892_01680 edd1277933f4a3136ce22a83b5821261 1613 PIRSF PIRSF036761 1 1610 0.0 T 12-10-2018 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 M892_01680 edd1277933f4a3136ce22a83b5821261 1613 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 76 1602 0.0 T 12-10-2018 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 M892_01680 edd1277933f4a3136ce22a83b5821261 1613 SUPERFAMILY SSF51735 945 1281 1.9E-28 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_03130 ff09021bc4d325ef96011275438ad04d 212 Pfam PF10014 2OG-Fe dioxygenase 24 211 1.5E-53 T 12-10-2018 IPR018724 2OG-Fe dioxygenase M892_03130 ff09021bc4d325ef96011275438ad04d 212 Gene3D G3DSA:2.60.120.620 2 212 3.3E-55 T 12-10-2018 M892_27820 c92b65ff70916b4e21fc7997c830120f 263 Pfam PF00072 Response regulator receiver domain 8 116 6.9E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_27820 c92b65ff70916b4e21fc7997c830120f 263 SMART SM00850 164 263 4.0E-19 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 M892_27820 c92b65ff70916b4e21fc7997c830120f 263 SMART SM00448 5 117 2.3E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_27820 c92b65ff70916b4e21fc7997c830120f 263 Gene3D G3DSA:2.40.50.40 156 228 7.1E-9 T 12-10-2018 M892_27820 c92b65ff70916b4e21fc7997c830120f 263 SUPERFAMILY SSF52172 4 156 4.7E-31 T 12-10-2018 IPR011006 CheY-like superfamily M892_27820 c92b65ff70916b4e21fc7997c830120f 263 Pfam PF04397 LytTr DNA-binding domain 165 262 7.9E-25 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 M892_27820 c92b65ff70916b4e21fc7997c830120f 263 Gene3D G3DSA:3.40.50.2300 2 139 1.4E-32 T 12-10-2018 M892_08740 9148cad26db5c7ca1dd4937b6f6ac8d5 225 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 72 1.8E-14 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M892_08740 9148cad26db5c7ca1dd4937b6f6ac8d5 225 SUPERFAMILY SSF48008 78 218 1.57E-13 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal M892_08740 9148cad26db5c7ca1dd4937b6f6ac8d5 225 Gene3D G3DSA:1.10.10.10 4 73 1.0E-14 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_08740 9148cad26db5c7ca1dd4937b6f6ac8d5 225 Pfam PF07729 FCD domain 82 209 1.8E-13 T 12-10-2018 IPR011711 GntR, C-terminal M892_08740 9148cad26db5c7ca1dd4937b6f6ac8d5 225 SMART SM00895 82 211 2.5E-4 T 12-10-2018 IPR011711 GntR, C-terminal M892_08740 9148cad26db5c7ca1dd4937b6f6ac8d5 225 SUPERFAMILY SSF46785 5 80 2.5E-13 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_08740 9148cad26db5c7ca1dd4937b6f6ac8d5 225 SMART SM00345 14 72 2.7E-7 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M892_08740 9148cad26db5c7ca1dd4937b6f6ac8d5 225 Gene3D G3DSA:1.20.120.530 77 223 4.9E-16 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal M892_24685 db44a681aee7008fa6f030267edc8e68 472 SUPERFAMILY SSF46785 15 82 1.86E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_24685 db44a681aee7008fa6f030267edc8e68 472 Gene3D G3DSA:1.10.10.10 12 82 2.4E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_24685 db44a681aee7008fa6f030267edc8e68 472 Gene3D G3DSA:3.40.640.10 98 466 3.5E-104 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M892_24685 db44a681aee7008fa6f030267edc8e68 472 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 55 1.2E-5 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M892_24685 db44a681aee7008fa6f030267edc8e68 472 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 55 71 1.2E-5 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M892_24685 db44a681aee7008fa6f030267edc8e68 472 SUPERFAMILY SSF53383 112 471 1.69E-77 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M892_24685 db44a681aee7008fa6f030267edc8e68 472 Pfam PF00155 Aminotransferase class I and II 132 404 4.7E-26 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 M892_24685 db44a681aee7008fa6f030267edc8e68 472 SMART SM00345 22 81 6.1E-15 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M892_24685 db44a681aee7008fa6f030267edc8e68 472 Pfam PF00392 Bacterial regulatory proteins, gntR family 24 81 6.7E-13 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M892_21150 ead5f2a94c9c027e4e81fb8c0bd0d6b1 555 PIRSF PIRSF011521 2 543 4.2E-184 T 12-10-2018 IPR014460 Signal transduction response regulator, predicted, VieB M892_21150 ead5f2a94c9c027e4e81fb8c0bd0d6b1 555 SMART SM00448 9 127 5.2E-19 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_21150 ead5f2a94c9c027e4e81fb8c0bd0d6b1 555 Gene3D G3DSA:1.25.40.10 137 303 1.4E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_21150 ead5f2a94c9c027e4e81fb8c0bd0d6b1 555 SUPERFAMILY SSF52172 7 142 1.21E-24 T 12-10-2018 IPR011006 CheY-like superfamily M892_21150 ead5f2a94c9c027e4e81fb8c0bd0d6b1 555 Pfam PF00072 Response regulator receiver domain 11 127 8.1E-17 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_21150 ead5f2a94c9c027e4e81fb8c0bd0d6b1 555 Gene3D G3DSA:3.40.50.2300 1 136 4.2E-22 T 12-10-2018 M892_21150 ead5f2a94c9c027e4e81fb8c0bd0d6b1 555 SUPERFAMILY SSF48452 171 300 4.69E-11 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_11570 34481be493e198db8e1cb5ef63a6c354 307 SUPERFAMILY SSF52283 25 120 2.27E-6 T 12-10-2018 M892_11570 34481be493e198db8e1cb5ef63a6c354 307 Gene3D G3DSA:3.40.50.720 34 299 2.9E-93 T 12-10-2018 M892_11570 34481be493e198db8e1cb5ef63a6c354 307 SUPERFAMILY SSF51735 93 273 4.58E-47 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_11570 34481be493e198db8e1cb5ef63a6c354 307 Gene3D G3DSA:3.40.50.720 91 276 2.9E-93 T 12-10-2018 M892_11570 34481be493e198db8e1cb5ef63a6c354 307 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 99 272 2.2E-48 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 M892_16995 e44f4d215682c3e3d4bd5c2bad874f33 787 SUPERFAMILY SSF102114 370 605 9.42E-11 T 12-10-2018 M892_16995 e44f4d215682c3e3d4bd5c2bad874f33 787 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 371 391 - T 12-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 M892_16995 e44f4d215682c3e3d4bd5c2bad874f33 787 Gene3D G3DSA:3.80.30.20 366 630 7.0E-13 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe M892_16995 e44f4d215682c3e3d4bd5c2bad874f33 787 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 24 636 6.3E-261 T 12-10-2018 IPR022946 Uncharacterised protein family UPF0313 M892_16995 e44f4d215682c3e3d4bd5c2bad874f33 787 Pfam PF08497 Radical SAM N-terminal 24 370 1.2E-141 T 12-10-2018 IPR013704 Uncharacterised protein family UPF0313, N-terminal M892_16995 e44f4d215682c3e3d4bd5c2bad874f33 787 Pfam PF04055 Radical SAM superfamily 371 576 9.5E-20 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 M892_16995 e44f4d215682c3e3d4bd5c2bad874f33 787 Pfam PF11842 Domain of unknown function (DUF3362) 585 739 2.0E-40 T 12-10-2018 IPR024560 Uncharacterised protein family UPF0313, C-terminal M892_16995 e44f4d215682c3e3d4bd5c2bad874f33 787 SMART SM00729 367 617 2.0E-4 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 M892_16995 e44f4d215682c3e3d4bd5c2bad874f33 787 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 24 638 48.808 T 12-10-2018 IPR022946 Uncharacterised protein family UPF0313 M892_08225 045bc13640609b5c35b163e6055a0e45 135 Pfam PF11697 Protein of unknown function (DUF3293) 36 105 3.1E-18 T 12-10-2018 IPR021710 Protein of unknown function DUF3293 M892_18240 264df2fe423ce81d9b8b04bff534ac88 178 Gene3D G3DSA:1.25.40.10 78 178 1.0E-33 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_18240 264df2fe423ce81d9b8b04bff534ac88 178 Pfam PF06041 Bacterial protein of unknown function (DUF924) 5 175 1.2E-64 T 12-10-2018 IPR010323 Protein of unknown function DUF924 M892_18240 264df2fe423ce81d9b8b04bff534ac88 178 SUPERFAMILY SSF48452 2 174 9.48E-69 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_18240 264df2fe423ce81d9b8b04bff534ac88 178 Gene3D G3DSA:1.20.58.320 1 77 1.1E-26 T 12-10-2018 M892_23360 24547f8cfa008964c48ff2dfed963117 126 Gene3D G3DSA:3.10.450.10 35 120 7.0E-9 T 12-10-2018 M892_23360 24547f8cfa008964c48ff2dfed963117 126 Pfam PF00031 Cystatin domain 50 105 5.1E-6 T 12-10-2018 IPR000010 Cystatin domain GO:0004869 M892_23360 24547f8cfa008964c48ff2dfed963117 126 SUPERFAMILY SSF54403 42 112 1.12E-14 T 12-10-2018 M892_08135 0b7b0efe828d11df486119a470b5d682 473 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 50 449 1.9E-132 T 12-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 M892_08135 0b7b0efe828d11df486119a470b5d682 473 Pfam PF05525 Branched-chain amino acid transport protein 44 462 5.1E-149 T 12-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 M892_12410 c5495dee9ab04d9e078fe82f61a63e08 334 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 333 4.6E-118 T 12-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 M892_12410 c5495dee9ab04d9e078fe82f61a63e08 334 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 145 9.8E-31 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 M892_12410 c5495dee9ab04d9e078fe82f61a63e08 334 SMART SM00859 3 146 4.8E-41 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 M892_12410 c5495dee9ab04d9e078fe82f61a63e08 334 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 164 311 2.3E-15 T 12-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 M892_12410 c5495dee9ab04d9e078fe82f61a63e08 334 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 149 165 - T 12-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 M892_12410 c5495dee9ab04d9e078fe82f61a63e08 334 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 334 37.591 T 12-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 M892_12410 c5495dee9ab04d9e078fe82f61a63e08 334 Gene3D G3DSA:3.40.50.720 6 329 5.6E-120 T 12-10-2018 M892_12410 c5495dee9ab04d9e078fe82f61a63e08 334 SUPERFAMILY SSF51735 1 173 2.14E-40 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_12410 c5495dee9ab04d9e078fe82f61a63e08 334 Gene3D G3DSA:3.30.360.10 153 312 5.6E-120 T 12-10-2018 M892_12410 c5495dee9ab04d9e078fe82f61a63e08 334 SUPERFAMILY SSF55347 154 308 1.2E-50 T 12-10-2018 M892_03165 5fa53f8a06653b08d538cfba43e02199 514 Pfam PF03050 Transposase IS66 family 184 467 4.3E-101 T 12-10-2018 IPR004291 Transposase, IS66 M892_03165 5fa53f8a06653b08d538cfba43e02199 514 Pfam PF13005 zinc-finger binding domain of transposase IS66 120 164 1.6E-16 T 12-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 M892_03165 5fa53f8a06653b08d538cfba43e02199 514 Pfam PF13007 Transposase C of IS166 homeodomain 42 112 2.2E-14 T 12-10-2018 IPR024463 Transposase TnpC, homeodomain M892_03165 5fa53f8a06653b08d538cfba43e02199 514 Pfam PF13817 IS66 C-terminal element 474 510 7.6E-8 T 12-10-2018 IPR039552 Transposase IS66, C-terminal M892_02445 8fa17ec635e890741f0be7faba14a683 345 SUPERFAMILY SSF56529 83 339 3.05E-55 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 M892_02445 8fa17ec635e890741f0be7faba14a683 345 Gene3D G3DSA:3.90.850.10 1 345 1.5E-135 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 M892_02445 8fa17ec635e890741f0be7faba14a683 345 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 88 339 8.9E-39 T 12-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 M892_24800 76b8e5df1daacd70b156664f7972eaaf 181 PRINTS PR01011 Glutathione peroxidase family signature 143 152 7.2E-12 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 M892_24800 76b8e5df1daacd70b156664f7972eaaf 181 PRINTS PR01011 Glutathione peroxidase family signature 48 65 7.2E-12 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 M892_24800 76b8e5df1daacd70b156664f7972eaaf 181 PRINTS PR01011 Glutathione peroxidase family signature 83 99 7.2E-12 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 M892_24800 76b8e5df1daacd70b156664f7972eaaf 181 ProSitePatterns PS00460 Glutathione peroxidases active site. 50 65 - T 12-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 M892_24800 76b8e5df1daacd70b156664f7972eaaf 181 Gene3D G3DSA:3.40.30.10 27 181 2.5E-44 T 12-10-2018 M892_24800 76b8e5df1daacd70b156664f7972eaaf 181 Pfam PF00255 Glutathione peroxidase 44 133 5.4E-26 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 M892_24800 76b8e5df1daacd70b156664f7972eaaf 181 SUPERFAMILY SSF52833 40 181 2.49E-42 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M892_24800 76b8e5df1daacd70b156664f7972eaaf 181 PIRSF PIRSF000303 2 181 9.9E-55 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 M892_21760 8b77b0061560452c17eba6eeba1039f3 408 Pfam PF05684 Protein of unknown function (DUF819) 11 401 4.2E-97 T 12-10-2018 IPR008537 Protein of unknown function DUF819 M892_21760 8b77b0061560452c17eba6eeba1039f3 408 PRINTS PR00173 Glutamate-aspartate symporter signature 92 117 5.1E-5 T 12-10-2018 M892_21760 8b77b0061560452c17eba6eeba1039f3 408 PRINTS PR00173 Glutamate-aspartate symporter signature 349 375 5.1E-5 T 12-10-2018 M892_21760 8b77b0061560452c17eba6eeba1039f3 408 PRINTS PR00173 Glutamate-aspartate symporter signature 4 24 5.1E-5 T 12-10-2018 M892_17260 d3f28b79176658ffb29aa4677ede87f0 635 Pfam PF01578 Cytochrome C assembly protein 89 294 4.0E-39 T 12-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 M892_17260 d3f28b79176658ffb29aa4677ede87f0 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 1.5E-66 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 M892_17260 d3f28b79176658ffb29aa4677ede87f0 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 131 148 1.5E-66 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 M892_17260 d3f28b79176658ffb29aa4677ede87f0 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 273 293 1.5E-66 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 M892_17260 d3f28b79176658ffb29aa4677ede87f0 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 309 328 1.5E-66 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 M892_17260 d3f28b79176658ffb29aa4677ede87f0 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 293 309 1.5E-66 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 M892_17260 d3f28b79176658ffb29aa4677ede87f0 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 209 235 1.5E-66 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 M892_17260 d3f28b79176658ffb29aa4677ede87f0 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 243 263 1.5E-66 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 M892_17260 d3f28b79176658ffb29aa4677ede87f0 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 158 180 1.5E-66 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 M892_17260 d3f28b79176658ffb29aa4677ede87f0 635 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 317 618 6.7E-60 T 12-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal M892_10470 19319ddb8d8cee2120e8488ef9588623 341 Gene3D G3DSA:3.40.190.10 121 323 3.4E-69 T 12-10-2018 M892_10470 19319ddb8d8cee2120e8488ef9588623 341 SUPERFAMILY SSF53850 120 326 3.44E-41 T 12-10-2018 M892_10470 19319ddb8d8cee2120e8488ef9588623 341 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 54 65 1.6E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_10470 19319ddb8d8cee2120e8488ef9588623 341 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 65 75 1.6E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_10470 19319ddb8d8cee2120e8488ef9588623 341 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 75 86 1.6E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_10470 19319ddb8d8cee2120e8488ef9588623 341 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 39 97 2.9E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_10470 19319ddb8d8cee2120e8488ef9588623 341 Gene3D G3DSA:3.40.190.10 200 299 3.4E-69 T 12-10-2018 M892_10470 19319ddb8d8cee2120e8488ef9588623 341 Pfam PF03466 LysR substrate binding domain 127 327 2.0E-23 T 12-10-2018 IPR005119 LysR, substrate-binding M892_10470 19319ddb8d8cee2120e8488ef9588623 341 SUPERFAMILY SSF46785 35 115 2.72E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_10470 19319ddb8d8cee2120e8488ef9588623 341 Gene3D G3DSA:1.10.10.10 31 118 1.4E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_14725 95633c4f8a881ab852a76092877cd46d 413 Pfam PF03116 NQR2, RnfD, RnfE family 40 404 5.5E-107 T 12-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 M892_14725 95633c4f8a881ab852a76092877cd46d 413 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 1 411 36.541 T 12-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 M892_14725 95633c4f8a881ab852a76092877cd46d 413 PIRSF PIRSF016055 1 413 9.4E-200 T 12-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 M892_14725 95633c4f8a881ab852a76092877cd46d 413 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 2 407 2.4E-203 T 12-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 M892_12935 0a26f5b176b36b5b765c94d98fafd670 421 Gene3D G3DSA:3.65.10.10 22 229 3.2E-171 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 M892_12935 0a26f5b176b36b5b765c94d98fafd670 421 SUPERFAMILY SSF55205 6 418 9.32E-142 T 12-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 M892_12935 0a26f5b176b36b5b765c94d98fafd670 421 Gene3D G3DSA:3.65.10.10 12 414 3.2E-171 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 M892_12935 0a26f5b176b36b5b765c94d98fafd670 421 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 11 407 2.2E-122 T 12-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 M892_12935 0a26f5b176b36b5b765c94d98fafd670 421 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 416 6.7E-182 T 12-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 M892_12935 0a26f5b176b36b5b765c94d98fafd670 421 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 417 43.771 T 12-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 M892_23575 b7c1eace591091ace00574f868faed0e 347 SUPERFAMILY SSF53098 221 318 1.82E-7 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_23575 b7c1eace591091ace00574f868faed0e 347 Gene3D G3DSA:3.30.420.470 142 339 4.8E-11 T 12-10-2018 M892_23575 b7c1eace591091ace00574f868faed0e 347 Pfam PF13358 DDE superfamily endonuclease 169 312 5.1E-32 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_23575 b7c1eace591091ace00574f868faed0e 347 SUPERFAMILY SSF46689 16 131 2.39E-25 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_23575 b7c1eace591091ace00574f868faed0e 347 Pfam PF13551 Winged helix-turn helix 32 87 2.3E-8 T 12-10-2018 M892_23575 b7c1eace591091ace00574f868faed0e 347 Pfam PF13592 Winged helix-turn helix 98 155 9.2E-20 T 12-10-2018 IPR025959 Winged helix-turn helix domain M892_14165 64ca80c4cbea2b57e73654ad69212975 175 Gene3D G3DSA:3.30.1050.10 16 139 1.9E-7 T 12-10-2018 IPR036527 SCP2 sterol-binding domain superfamily M892_14165 64ca80c4cbea2b57e73654ad69212975 175 Pfam PF02036 SCP-2 sterol transfer family 42 134 1.3E-19 T 12-10-2018 IPR003033 SCP2 sterol-binding domain M892_14165 64ca80c4cbea2b57e73654ad69212975 175 PIRSF PIRSF025550 1 174 1.4E-86 T 12-10-2018 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT M892_14165 64ca80c4cbea2b57e73654ad69212975 175 SUPERFAMILY SSF55718 44 139 9.65E-21 T 12-10-2018 IPR036527 SCP2 sterol-binding domain superfamily M892_16250 b4434a77289ef0650bf283f49aa2942b 314 Gene3D G3DSA:3.40.30.130 1 169 7.8E-66 T 12-10-2018 M892_16250 b4434a77289ef0650bf283f49aa2942b 314 SUPERFAMILY SSF52833 31 150 3.84E-17 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M892_16250 b4434a77289ef0650bf283f49aa2942b 314 Pfam PF13410 Glutathione S-transferase, C-terminal domain 192 263 3.3E-14 T 12-10-2018 M892_16250 b4434a77289ef0650bf283f49aa2942b 314 Pfam PF13409 Glutathione S-transferase, N-terminal domain 56 146 1.2E-22 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 M892_16250 b4434a77289ef0650bf283f49aa2942b 314 Gene3D G3DSA:1.20.1050.10 170 314 2.5E-71 T 12-10-2018 M892_16250 b4434a77289ef0650bf283f49aa2942b 314 PIRSF PIRSF015753 5 312 9.6E-137 T 12-10-2018 IPR016639 Glutathione S-transferase Omega/GSH GO:0004364 M892_16250 b4434a77289ef0650bf283f49aa2942b 314 SUPERFAMILY SSF47616 164 312 5.71E-38 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily M892_27830 21a69e76e508996b8895fe5a7a7fa91c 553 SUPERFAMILY SSF58104 244 553 2.49E-75 T 12-10-2018 M892_27830 21a69e76e508996b8895fe5a7a7fa91c 553 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 336 518 4.6E-41 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M892_27830 21a69e76e508996b8895fe5a7a7fa91c 553 SMART SM01049 44 130 5.4E-22 T 12-10-2018 IPR033480 Single Cache domain 2 M892_27830 21a69e76e508996b8895fe5a7a7fa91c 553 SMART SM00283 291 552 1.1E-75 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M892_27830 21a69e76e508996b8895fe5a7a7fa91c 553 Gene3D G3DSA:3.30.450.20 29 202 7.8E-33 T 12-10-2018 M892_27830 21a69e76e508996b8895fe5a7a7fa91c 553 Pfam PF17200 Single Cache domain 2 47 188 1.3E-29 T 12-10-2018 IPR033480 Single Cache domain 2 M892_27830 21a69e76e508996b8895fe5a7a7fa91c 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 2 27 2.9E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M892_27830 21a69e76e508996b8895fe5a7a7fa91c 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 389 416 2.9E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M892_27830 21a69e76e508996b8895fe5a7a7fa91c 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 418 447 2.9E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M892_27830 21a69e76e508996b8895fe5a7a7fa91c 553 Gene3D G3DSA:1.10.287.950 221 553 1.7E-73 T 12-10-2018 M892_27830 21a69e76e508996b8895fe5a7a7fa91c 553 SMART SM00304 222 276 2.0E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M892_03150 37c263799fe9d505acf1edc3e0319f5b 346 SUPERFAMILY SSF46689 15 131 1.19E-24 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_03150 37c263799fe9d505acf1edc3e0319f5b 346 Gene3D G3DSA:3.30.420.470 136 343 6.2E-14 T 12-10-2018 M892_03150 37c263799fe9d505acf1edc3e0319f5b 346 Pfam PF13592 Winged helix-turn helix 98 154 2.3E-21 T 12-10-2018 IPR025959 Winged helix-turn helix domain M892_03150 37c263799fe9d505acf1edc3e0319f5b 346 Pfam PF13358 DDE superfamily endonuclease 167 309 4.5E-35 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_03150 37c263799fe9d505acf1edc3e0319f5b 346 Pfam PF13551 Winged helix-turn helix 32 85 3.4E-7 T 12-10-2018 M892_03150 37c263799fe9d505acf1edc3e0319f5b 346 SUPERFAMILY SSF53098 223 306 9.86E-7 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_27145 0ffea748976c768774810d92b2ea65de 90 Gene3D G3DSA:3.40.190.290 3 86 1.2E-16 T 12-10-2018 M892_27145 0ffea748976c768774810d92b2ea65de 90 Pfam PF03466 LysR substrate binding domain 9 84 3.4E-9 T 12-10-2018 IPR005119 LysR, substrate-binding M892_27145 0ffea748976c768774810d92b2ea65de 90 SUPERFAMILY SSF53850 8 88 2.53E-10 T 12-10-2018 M892_17140 ff2174181d4c53e7f68678fef5c7310a 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 1.8E-18 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_17140 ff2174181d4c53e7f68678fef5c7310a 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 1.1E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_17140 ff2174181d4c53e7f68678fef5c7310a 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 1.1E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_17140 ff2174181d4c53e7f68678fef5c7310a 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 1.1E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_17140 ff2174181d4c53e7f68678fef5c7310a 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_17140 ff2174181d4c53e7f68678fef5c7310a 214 Gene3D G3DSA:3.40.50.12740 2 209 3.5E-60 T 12-10-2018 M892_17140 ff2174181d4c53e7f68678fef5c7310a 214 SUPERFAMILY SSF46894 136 210 1.22E-18 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M892_17140 ff2174181d4c53e7f68678fef5c7310a 214 SUPERFAMILY SSF52172 2 132 5.55E-34 T 12-10-2018 IPR011006 CheY-like superfamily M892_17140 ff2174181d4c53e7f68678fef5c7310a 214 SMART SM00421 146 203 2.6E-16 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_17140 ff2174181d4c53e7f68678fef5c7310a 214 SMART SM00448 2 115 3.2E-31 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_17140 ff2174181d4c53e7f68678fef5c7310a 214 Pfam PF00072 Response regulator receiver domain 4 116 1.8E-31 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_03135 6cf1e1ec98ce18cf311e8c1b1467c882 412 TIGRFAM TIGR01976 am_tr_V_VC1184: cysteine desulfurase family protein 11 408 2.3E-127 T 12-10-2018 IPR011340 Cysteine desulfurase-related M892_03135 6cf1e1ec98ce18cf311e8c1b1467c882 412 Gene3D G3DSA:3.40.640.10 39 294 2.8E-118 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M892_03135 6cf1e1ec98ce18cf311e8c1b1467c882 412 Pfam PF00266 Aminotransferase class-V 31 404 3.7E-64 T 12-10-2018 IPR000192 Aminotransferase class V domain M892_03135 6cf1e1ec98ce18cf311e8c1b1467c882 412 Gene3D G3DSA:3.90.1150.10 31 408 2.8E-118 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M892_03135 6cf1e1ec98ce18cf311e8c1b1467c882 412 SUPERFAMILY SSF53383 11 412 1.9E-82 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M892_09570 e4bb6030cdb6c1393052a1629f342086 56 Gene3D G3DSA:2.20.28.120 1 56 1.2E-28 T 12-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_09570 e4bb6030cdb6c1393052a1629f342086 56 SUPERFAMILY SSF57829 3 54 7.32E-19 T 12-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 M892_09570 e4bb6030cdb6c1393052a1629f342086 56 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 56 1.4E-26 T 12-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_09570 e4bb6030cdb6c1393052a1629f342086 56 ProSitePatterns PS00582 Ribosomal protein L33 signature. 22 41 - T 12-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_09570 e4bb6030cdb6c1393052a1629f342086 56 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 6 54 14.671 T 12-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_09570 e4bb6030cdb6c1393052a1629f342086 56 Pfam PF00471 Ribosomal protein L33 8 54 1.2E-16 T 12-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_18355 67b925b1cf7914cea82c4c776b5c8650 815 Gene3D G3DSA:2.40.40.20 651 809 7.6E-45 T 12-10-2018 M892_18355 67b925b1cf7914cea82c4c776b5c8650 815 Gene3D G3DSA:3.40.228.10 178 643 1.8E-214 T 12-10-2018 M892_18355 67b925b1cf7914cea82c4c776b5c8650 815 TIGRFAM TIGR00509 bisC_fam: molybdopterin guanine dinucleotide-containing S/N-oxide reductases 43 813 0.0 T 12-10-2018 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase GO:0016491|GO:0055114 M892_18355 67b925b1cf7914cea82c4c776b5c8650 815 SUPERFAMILY SSF53706 47 667 1.16E-162 T 12-10-2018 M892_18355 67b925b1cf7914cea82c4c776b5c8650 815 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 4 27 6.1E-5 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal M892_18355 67b925b1cf7914cea82c4c776b5c8650 815 SUPERFAMILY SSF50692 672 813 1.76E-40 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily M892_18355 67b925b1cf7914cea82c4c776b5c8650 815 Pfam PF01568 Molydopterin dinucleotide binding domain 675 791 1.7E-24 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 M892_18355 67b925b1cf7914cea82c4c776b5c8650 815 Gene3D G3DSA:3.90.55.10 83 617 1.8E-214 T 12-10-2018 M892_18355 67b925b1cf7914cea82c4c776b5c8650 815 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 498 515 - T 12-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 M892_18355 67b925b1cf7914cea82c4c776b5c8650 815 Gene3D G3DSA:3.40.50.740 86 566 1.8E-214 T 12-10-2018 M892_18355 67b925b1cf7914cea82c4c776b5c8650 815 Pfam PF00384 Molybdopterin oxidoreductase 86 555 3.1E-103 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M892_20460 7f9ff0e9151d992098b2280c4e799243 260 SMART SM00342 172 254 3.2E-22 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M892_20460 7f9ff0e9151d992098b2280c4e799243 260 Pfam PF12833 Helix-turn-helix domain 179 255 9.8E-16 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M892_20460 7f9ff0e9151d992098b2280c4e799243 260 SUPERFAMILY SSF46689 207 256 2.28E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_20460 7f9ff0e9151d992098b2280c4e799243 260 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 238 254 8.7E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 M892_20460 7f9ff0e9151d992098b2280c4e799243 260 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 223 238 8.7E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 M892_20460 7f9ff0e9151d992098b2280c4e799243 260 Gene3D G3DSA:1.10.10.60 152 258 1.4E-22 T 12-10-2018 M892_20125 30536409f33c67b6137934d8d9c9b53a 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 8.5E-29 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 M892_20125 30536409f33c67b6137934d8d9c9b53a 70 SMART SM00357 6 70 1.6E-29 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 M892_20125 30536409f33c67b6137934d8d9c9b53a 70 SUPERFAMILY SSF50249 4 69 1.08E-24 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M892_20125 30536409f33c67b6137934d8d9c9b53a 70 Gene3D G3DSA:2.40.50.140 2 69 3.8E-29 T 12-10-2018 M892_20125 30536409f33c67b6137934d8d9c9b53a 70 PRINTS PR00050 Cold shock protein signature 28 37 3.0E-17 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 M892_20125 30536409f33c67b6137934d8d9c9b53a 70 PRINTS PR00050 Cold shock protein signature 7 22 3.0E-17 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 M892_20125 30536409f33c67b6137934d8d9c9b53a 70 PRINTS PR00050 Cold shock protein signature 43 61 3.0E-17 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 M892_20125 30536409f33c67b6137934d8d9c9b53a 70 PIRSF PIRSF002599 1 70 5.6E-24 T 12-10-2018 IPR012156 Cold shock, CspA GO:0003676 M892_12020 78cd342f42143d99dae13b82d45e39bb 471 Pfam PF00939 Sodium:sulfate symporter transmembrane region 9 464 2.3E-48 T 12-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 M892_12020 78cd342f42143d99dae13b82d45e39bb 471 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 36 468 8.3E-82 T 12-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 M892_26455 b06622cc0985b3fd8c5f8c98ca75714e 122 SUPERFAMILY SSF50729 10 105 1.35E-34 T 12-10-2018 M892_26455 b06622cc0985b3fd8c5f8c98ca75714e 122 Gene3D G3DSA:2.30.29.50 3 114 1.0E-34 T 12-10-2018 IPR037063 Bacterial Pleckstrin homology domain superfamily M892_26455 b06622cc0985b3fd8c5f8c98ca75714e 122 Pfam PF08000 Bacterial PH domain 5 106 7.0E-37 T 12-10-2018 IPR012544 Bacterial Pleckstrin homology domain M892_13445 7bbe4069a3a6b6be5a2d6e293151d173 126 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 3 125 1.3E-31 T 12-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 M892_13445 7bbe4069a3a6b6be5a2d6e293151d173 126 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 9 87 2.0E-35 T 12-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 M892_13445 7bbe4069a3a6b6be5a2d6e293151d173 126 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 2 126 1.2E-44 T 12-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 M892_13445 7bbe4069a3a6b6be5a2d6e293151d173 126 SUPERFAMILY SSF56214 3 125 1.57E-30 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 M892_13445 7bbe4069a3a6b6be5a2d6e293151d173 126 Gene3D G3DSA:3.90.470.20 1 126 6.7E-40 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 M892_13445 7bbe4069a3a6b6be5a2d6e293151d173 126 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 4 126 25.972 T 12-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 M892_13445 7bbe4069a3a6b6be5a2d6e293151d173 126 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 5 122 1.8E-21 T 12-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 M892_00575 5d791af4c23978d60faaa3976c8e4eae 345 Pfam PF03773 Predicted permease 11 341 6.9E-58 T 12-10-2018 IPR005524 Predicted permease DUF318 M892_03695 9afd9a99a8e175267235cb0e0a0450c3 120 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 4 96 6.4E-33 T 12-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 M892_03695 9afd9a99a8e175267235cb0e0a0450c3 120 SUPERFAMILY SSF55620 1 118 5.56E-41 T 12-10-2018 M892_03695 9afd9a99a8e175267235cb0e0a0450c3 120 Gene3D G3DSA:3.30.479.10 1 120 8.5E-50 T 12-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 M892_03695 9afd9a99a8e175267235cb0e0a0450c3 120 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 5 120 2.1E-35 T 12-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 M892_03695 9afd9a99a8e175267235cb0e0a0450c3 120 PIRSF PIRSF006113 1 120 3.0E-53 T 12-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 M892_09170 98717f215155676eca4114be3006e924 123 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 123 1.5E-58 T 12-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 M892_09170 98717f215155676eca4114be3006e924 123 Gene3D G3DSA:2.40.150.20 1 123 3.9E-56 T 12-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 M892_09170 98717f215155676eca4114be3006e924 123 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 12-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_09170 98717f215155676eca4114be3006e924 123 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 123 27.363 T 12-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 M892_09170 98717f215155676eca4114be3006e924 123 SMART SM01374 1 123 1.3E-85 T 12-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 M892_09170 98717f215155676eca4114be3006e924 123 Pfam PF00238 Ribosomal protein L14p/L23e 1 123 2.1E-54 T 12-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 M892_09170 98717f215155676eca4114be3006e924 123 SUPERFAMILY SSF50193 2 122 4.19E-51 T 12-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 M892_06530 5eea7a24a2adb5d0ac271353bf866ef2 384 Gene3D G3DSA:1.20.1330.10 292 343 4.9E-47 T 12-10-2018 M892_06530 5eea7a24a2adb5d0ac271353bf866ef2 384 Gene3D G3DSA:1.20.1330.10 45 172 1.6E-71 T 12-10-2018 M892_06530 5eea7a24a2adb5d0ac271353bf866ef2 384 Gene3D G3DSA:2.170.280.10 207 291 4.9E-47 T 12-10-2018 M892_06530 5eea7a24a2adb5d0ac271353bf866ef2 384 Gene3D G3DSA:1.20.58.1830 349 383 4.9E-47 T 12-10-2018 M892_06530 5eea7a24a2adb5d0ac271353bf866ef2 384 Gene3D G3DSA:1.20.58.1830 5 33 1.6E-71 T 12-10-2018 M892_06530 5eea7a24a2adb5d0ac271353bf866ef2 384 SUPERFAMILY SSF64518 1 384 3.53E-98 T 12-10-2018 M892_06530 5eea7a24a2adb5d0ac271353bf866ef2 384 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 3.4E-43 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 M892_06530 5eea7a24a2adb5d0ac271353bf866ef2 384 PRINTS PR00207 Flagellin signature 111 134 1.2E-24 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 M892_06530 5eea7a24a2adb5d0ac271353bf866ef2 384 PRINTS PR00207 Flagellin signature 37 54 1.2E-24 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 M892_06530 5eea7a24a2adb5d0ac271353bf866ef2 384 PRINTS PR00207 Flagellin signature 76 95 1.2E-24 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 M892_06530 5eea7a24a2adb5d0ac271353bf866ef2 384 Pfam PF00700 Bacterial flagellin C-terminal helical region 299 383 3.3E-26 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 M892_06530 5eea7a24a2adb5d0ac271353bf866ef2 384 Pfam PF07196 Flagellin hook IN motif 195 252 4.9E-10 T 12-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 M892_25640 6ccfc68e62605781ccc78122df15e0ef 471 Gene3D G3DSA:3.40.50.620 3 204 8.1E-72 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M892_25640 6ccfc68e62605781ccc78122df15e0ef 471 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 325 337 - T 12-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal M892_25640 6ccfc68e62605781ccc78122df15e0ef 471 SUPERFAMILY SSF52425 2 178 8.5E-47 T 12-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 M892_25640 6ccfc68e62605781ccc78122df15e0ef 471 Pfam PF00875 DNA photolyase 3 168 5.0E-44 T 12-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 M892_25640 6ccfc68e62605781ccc78122df15e0ef 471 SUPERFAMILY SSF48173 194 470 3.53E-104 T 12-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 M892_25640 6ccfc68e62605781ccc78122df15e0ef 471 PRINTS PR00147 DNA photolyase signature 384 398 1.2E-29 T 12-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 M892_25640 6ccfc68e62605781ccc78122df15e0ef 471 PRINTS PR00147 DNA photolyase signature 325 341 1.2E-29 T 12-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 M892_25640 6ccfc68e62605781ccc78122df15e0ef 471 PRINTS PR00147 DNA photolyase signature 345 363 1.2E-29 T 12-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 M892_25640 6ccfc68e62605781ccc78122df15e0ef 471 PRINTS PR00147 DNA photolyase signature 142 158 1.2E-29 T 12-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 M892_25640 6ccfc68e62605781ccc78122df15e0ef 471 Gene3D G3DSA:1.25.40.80 133 286 8.1E-72 T 12-10-2018 M892_25640 6ccfc68e62605781ccc78122df15e0ef 471 Gene3D G3DSA:1.10.579.10 293 471 8.1E-80 T 12-10-2018 M892_25640 6ccfc68e62605781ccc78122df15e0ef 471 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 345 364 - T 12-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal M892_25640 6ccfc68e62605781ccc78122df15e0ef 471 Pfam PF03441 FAD binding domain of DNA photolyase 275 467 8.9E-80 T 12-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 M892_13010 8358bb5a11b1e0971437b6875ffd416e 150 Gene3D G3DSA:3.40.50.10110 1 147 3.7E-43 T 12-10-2018 IPR036768 DNA polymerase III subunit chi superfamily M892_13010 8358bb5a11b1e0971437b6875ffd416e 150 SUPERFAMILY SSF102400 2 146 1.44E-41 T 12-10-2018 IPR036768 DNA polymerase III subunit chi superfamily M892_13010 8358bb5a11b1e0971437b6875ffd416e 150 Pfam PF04364 DNA polymerase III chi subunit, HolC 2 143 6.5E-33 T 12-10-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 M892_09885 873ab8f7110042f15ed365c045dcebcf 609 Gene3D G3DSA:2.40.50.250 487 603 3.2E-130 T 12-10-2018 M892_09885 873ab8f7110042f15ed365c045dcebcf 609 Pfam PF00009 Elongation factor Tu GTP binding domain 8 198 4.9E-57 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M892_09885 873ab8f7110042f15ed365c045dcebcf 609 Gene3D G3DSA:3.40.50.300 5 202 4.2E-69 T 12-10-2018 M892_09885 873ab8f7110042f15ed365c045dcebcf 609 PRINTS PR00315 GTP-binding elongation factor signature 75 85 1.8E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M892_09885 873ab8f7110042f15ed365c045dcebcf 609 PRINTS PR00315 GTP-binding elongation factor signature 91 102 1.8E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M892_09885 873ab8f7110042f15ed365c045dcebcf 609 PRINTS PR00315 GTP-binding elongation factor signature 11 24 1.8E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M892_09885 873ab8f7110042f15ed365c045dcebcf 609 PRINTS PR00315 GTP-binding elongation factor signature 55 63 1.8E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M892_09885 873ab8f7110042f15ed365c045dcebcf 609 PRINTS PR00315 GTP-binding elongation factor signature 127 136 1.8E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M892_09885 873ab8f7110042f15ed365c045dcebcf 609 SUPERFAMILY SSF54980 306 391 5.4E-16 T 12-10-2018 IPR035647 EF-G domain III/V-like M892_09885 873ab8f7110042f15ed365c045dcebcf 609 Gene3D G3DSA:3.30.70.240 393 486 3.2E-130 T 12-10-2018 M892_09885 873ab8f7110042f15ed365c045dcebcf 609 Gene3D G3DSA:2.40.30.10 203 303 6.2E-34 T 12-10-2018 M892_09885 873ab8f7110042f15ed365c045dcebcf 609 Pfam PF03144 Elongation factor Tu domain 2 223 293 2.2E-9 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 M892_09885 873ab8f7110042f15ed365c045dcebcf 609 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 155 2.4E-24 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 M892_09885 873ab8f7110042f15ed365c045dcebcf 609 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site M892_09885 873ab8f7110042f15ed365c045dcebcf 609 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 9 603 2.9E-294 T 12-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 M892_09885 873ab8f7110042f15ed365c045dcebcf 609 Pfam PF00679 Elongation factor G C-terminus 399 480 3.8E-22 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like M892_09885 873ab8f7110042f15ed365c045dcebcf 609 SUPERFAMILY SSF54980 402 516 1.77E-26 T 12-10-2018 IPR035647 EF-G domain III/V-like M892_09885 873ab8f7110042f15ed365c045dcebcf 609 SUPERFAMILY SSF50447 155 303 7.07E-33 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily M892_09885 873ab8f7110042f15ed365c045dcebcf 609 SUPERFAMILY SSF52540 5 211 5.35E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_09885 873ab8f7110042f15ed365c045dcebcf 609 Gene3D G3DSA:3.30.70.870 310 594 3.2E-130 T 12-10-2018 M892_07545 c6c3791cf897befb686331ddb2cc2809 443 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 11 356 1.8E-134 T 12-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 M892_07545 c6c3791cf897befb686331ddb2cc2809 443 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 7 443 31.358 T 12-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 M892_07545 c6c3791cf897befb686331ddb2cc2809 443 Pfam PF13742 OB-fold nucleic acid binding domain 10 103 5.9E-30 T 12-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 M892_07545 c6c3791cf897befb686331ddb2cc2809 443 Pfam PF02601 Exonuclease VII, large subunit 126 440 1.3E-102 T 12-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 M892_16975 80b3c0ef41da8afb35626840300972d7 468 PRINTS PR00173 Glutamate-aspartate symporter signature 372 391 3.6E-16 T 12-10-2018 M892_16975 80b3c0ef41da8afb35626840300972d7 468 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 3.6E-16 T 12-10-2018 M892_16975 80b3c0ef41da8afb35626840300972d7 468 PRINTS PR00173 Glutamate-aspartate symporter signature 105 130 3.6E-16 T 12-10-2018 M892_16975 80b3c0ef41da8afb35626840300972d7 468 PRINTS PR00173 Glutamate-aspartate symporter signature 185 207 3.6E-16 T 12-10-2018 M892_16975 80b3c0ef41da8afb35626840300972d7 468 PRINTS PR00173 Glutamate-aspartate symporter signature 399 419 3.6E-16 T 12-10-2018 M892_16975 80b3c0ef41da8afb35626840300972d7 468 PRINTS PR00173 Glutamate-aspartate symporter signature 27 47 3.6E-16 T 12-10-2018 M892_16975 80b3c0ef41da8afb35626840300972d7 468 SUPERFAMILY SSF118215 30 444 5.89E-84 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 M892_16975 80b3c0ef41da8afb35626840300972d7 468 Pfam PF00375 Sodium:dicarboxylate symporter family 30 444 9.1E-92 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 M892_16975 80b3c0ef41da8afb35626840300972d7 468 Gene3D G3DSA:1.10.3860.10 21 462 1.8E-97 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 M892_21110 6b3d3187d002a27a090b23153eaa323f 569 SUPERFAMILY SSF51905 1 533 6.64E-85 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_21110 6b3d3187d002a27a090b23153eaa323f 569 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 82 105 - T 12-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 M892_21110 6b3d3187d002a27a090b23153eaa323f 569 Gene3D G3DSA:4.10.450.10 38 198 5.3E-175 T 12-10-2018 IPR027424 Glucose Oxidase, domain 2 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 M892_21110 6b3d3187d002a27a090b23153eaa323f 569 Pfam PF05199 GMC oxidoreductase 388 526 2.5E-38 T 12-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 M892_21110 6b3d3187d002a27a090b23153eaa323f 569 Gene3D G3DSA:1.10.1220.110 97 150 5.3E-175 T 12-10-2018 M892_21110 6b3d3187d002a27a090b23153eaa323f 569 Gene3D G3DSA:3.50.50.60 4 530 5.3E-175 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_21110 6b3d3187d002a27a090b23153eaa323f 569 TIGRFAM TIGR01810 betA: choline dehydrogenase 6 533 1.7E-232 T 12-10-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 M892_21110 6b3d3187d002a27a090b23153eaa323f 569 PIRSF PIRSF000137 1 541 2.5E-144 T 12-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 M892_21110 6b3d3187d002a27a090b23153eaa323f 569 SUPERFAMILY SSF54373 292 474 1.77E-59 T 12-10-2018 M892_21110 6b3d3187d002a27a090b23153eaa323f 569 Hamap MF_00750 Oxygen-dependent choline dehydrogenase [betA]. 3 553 59.734 T 12-10-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 M892_21110 6b3d3187d002a27a090b23153eaa323f 569 Gene3D G3DSA:3.30.410.40 151 471 5.3E-175 T 12-10-2018 M892_21110 6b3d3187d002a27a090b23153eaa323f 569 Pfam PF00732 GMC oxidoreductase 5 297 1.4E-88 T 12-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 M892_22820 64f1c72f0ad3d5961bcc0e27baee410f 114 Pfam PF10734 Protein of unknown function (DUF2523) 38 110 3.8E-7 T 12-10-2018 IPR019670 Protein of unkown function DUF2523 M892_22820 64f1c72f0ad3d5961bcc0e27baee410f 114 ProDom PD065768 ENTEROTOXIN ACE ACCESSORY TRANSMEMBRANE MEMBRANE TOXIN CHOLERA 27 113 0.003 T 12-10-2018 IPR020495 Accessory cholera enterotoxin, Ace M892_14980 fa3fddcebba806b9f5598b0fbf3c3817 104 Gene3D G3DSA:1.10.760.10 22 104 7.9E-27 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M892_14980 fa3fddcebba806b9f5598b0fbf3c3817 104 Pfam PF00034 Cytochrome c 31 104 4.7E-10 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_14980 fa3fddcebba806b9f5598b0fbf3c3817 104 SUPERFAMILY SSF46626 4 104 2.15E-24 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M892_16445 fea4c767c868842feca9c62b6713cccd 209 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 198 1.6E-61 T 12-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 M892_16445 fea4c767c868842feca9c62b6713cccd 209 Hamap MF_00165 Thymidylate kinase [tmk]. 4 206 27.077 T 12-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 M892_16445 fea4c767c868842feca9c62b6713cccd 209 Pfam PF02223 Thymidylate kinase 8 198 2.9E-58 T 12-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 M892_16445 fea4c767c868842feca9c62b6713cccd 209 ProSitePatterns PS01331 Thymidylate kinase signature. 95 107 - T 12-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 M892_16445 fea4c767c868842feca9c62b6713cccd 209 SUPERFAMILY SSF52540 1 206 2.17E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_16445 fea4c767c868842feca9c62b6713cccd 209 Gene3D G3DSA:3.40.50.300 3 208 4.1E-62 T 12-10-2018 M892_24840 f3e6e2560099dfee8d466d45d72e5340 261 Pfam PF08218 Citrate lyase ligase C-terminal domain 76 257 4.4E-59 T 12-10-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 M892_24840 f3e6e2560099dfee8d466d45d72e5340 261 Gene3D G3DSA:3.40.50.620 82 261 6.5E-19 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M892_24840 f3e6e2560099dfee8d466d45d72e5340 261 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 54 257 1.0E-43 T 12-10-2018 M892_24840 f3e6e2560099dfee8d466d45d72e5340 261 SUPERFAMILY SSF52374 83 259 3.52E-18 T 12-10-2018 M892_24840 f3e6e2560099dfee8d466d45d72e5340 261 SMART SM00764 76 257 2.0E-57 T 12-10-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 M892_14235 94792b31523275cf188ca497d99ccd2d 326 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 107 277 1.6E-27 T 12-10-2018 M892_14235 94792b31523275cf188ca497d99ccd2d 326 Gene3D G3DSA:3.40.50.1000 2 310 1.0E-166 T 12-10-2018 IPR023214 HAD superfamily M892_14235 94792b31523275cf188ca497d99ccd2d 326 SUPERFAMILY SSF56784 105 311 1.35E-49 T 12-10-2018 IPR036412 HAD-like superfamily M892_14235 94792b31523275cf188ca497d99ccd2d 326 Gene3D G3DSA:1.10.150.210 115 177 1.0E-166 T 12-10-2018 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|Reactome: R-HSA-977347 M892_14235 94792b31523275cf188ca497d99ccd2d 326 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 102 310 2.1E-83 T 12-10-2018 M892_14235 94792b31523275cf188ca497d99ccd2d 326 Pfam PF00702 haloacid dehalogenase-like hydrolase 107 279 8.3E-16 T 12-10-2018 M892_14235 94792b31523275cf188ca497d99ccd2d 326 Gene3D G3DSA:3.30.70.2020 8 318 1.0E-166 T 12-10-2018 M892_15820 abaf25027c9a9e15a1da797d4e0bbdd7 182 PIRSF PIRSF000232 1 182 6.1E-64 T 12-10-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like M892_15820 abaf25027c9a9e15a1da797d4e0bbdd7 182 Pfam PF00881 Nitroreductase family 8 161 2.2E-23 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 M892_15820 abaf25027c9a9e15a1da797d4e0bbdd7 182 SUPERFAMILY SSF55469 1 181 4.19E-42 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 M892_15820 abaf25027c9a9e15a1da797d4e0bbdd7 182 Gene3D G3DSA:3.40.109.10 1 182 1.9E-42 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 M892_20810 bf5cd381e279707fbd9c02e7b3a46645 283 SUPERFAMILY SSF53098 121 282 7.59E-43 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_20810 bf5cd381e279707fbd9c02e7b3a46645 283 Pfam PF13276 HTH-like domain 42 96 3.1E-9 T 12-10-2018 IPR025948 HTH-like domain M892_20810 bf5cd381e279707fbd9c02e7b3a46645 283 Pfam PF00665 Integrase core domain 121 234 2.2E-33 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 M892_20810 bf5cd381e279707fbd9c02e7b3a46645 283 Gene3D G3DSA:3.30.420.10 118 273 5.7E-19 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M892_15615 b300d75eef051062c64be346e7b10f93 109 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 1 105 4.9E-40 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family M892_15615 b300d75eef051062c64be346e7b10f93 109 Gene3D G3DSA:3.30.1310.10 1 109 6.4E-48 T 12-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily M892_15615 b300d75eef051062c64be346e7b10f93 109 Pfam PF02575 YbaB/EbfC DNA-binding family 11 100 1.7E-35 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family M892_15615 b300d75eef051062c64be346e7b10f93 109 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 98 23.388 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family M892_15615 b300d75eef051062c64be346e7b10f93 109 SUPERFAMILY SSF82607 11 103 1.7E-36 T 12-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily M892_15615 b300d75eef051062c64be346e7b10f93 109 PIRSF PIRSF004555 3 109 1.7E-40 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family M892_10615 da1ba13feafd0ec380b126d005616fdc 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 137 6.2E-37 T 12-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 M892_10615 da1ba13feafd0ec380b126d005616fdc 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 13.488 T 12-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 M892_10615 da1ba13feafd0ec380b126d005616fdc 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 5.8E-60 T 12-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 M892_10615 da1ba13feafd0ec380b126d005616fdc 156 SUPERFAMILY SSF81573 63 121 7.19E-15 T 12-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily M892_10615 da1ba13feafd0ec380b126d005616fdc 156 Gene3D G3DSA:1.20.5.620 62 122 8.7E-24 T 12-10-2018 M892_14375 64d2de91497b18f9b831ed2c39260293 174 Pfam PF16964 Putative tight adherence pilin protein F 6 174 1.5E-33 T 12-10-2018 IPR031582 Putative tight adherence pilin protein F M892_09405 8b4ea1e2ff9f072be651dfa3f7e18bd0 320 Pfam PF02706 Chain length determinant protein 23 125 3.1E-20 T 12-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 M892_09405 8b4ea1e2ff9f072be651dfa3f7e18bd0 320 Pfam PF13807 G-rich domain on putative tyrosine kinase 251 315 9.8E-9 T 12-10-2018 IPR032807 Tyrosine kinase, G-rich domain M892_26895 edddc91e2069cdfca4710ab749bf023c 155 Gene3D G3DSA:2.60.40.1890 33 148 1.8E-37 T 12-10-2018 IPR036182 Copper chaperone PCuAC superfamily M892_26895 edddc91e2069cdfca4710ab749bf023c 155 SUPERFAMILY SSF110087 5 145 1.7E-43 T 12-10-2018 IPR036182 Copper chaperone PCuAC superfamily M892_26895 edddc91e2069cdfca4710ab749bf023c 155 Pfam PF04314 Copper chaperone PCu(A)C 31 135 2.6E-36 T 12-10-2018 IPR007410 Copper chaperone PCuAC M892_15510 cb4a219e29abb9b5ee819d5afed0b1b2 174 Gene3D G3DSA:3.40.50.360 1 174 1.8E-32 T 12-10-2018 IPR029039 Flavoprotein-like superfamily M892_15510 cb4a219e29abb9b5ee819d5afed0b1b2 174 SUPERFAMILY SSF52218 1 173 3.52E-35 T 12-10-2018 IPR029039 Flavoprotein-like superfamily M892_15510 cb4a219e29abb9b5ee819d5afed0b1b2 174 Pfam PF03358 NADPH-dependent FMN reductase 1 135 1.2E-26 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 M892_22185 c07a3ca52040bc1e96bdaef200f2a065 189 Pfam PF04264 YceI-like domain 25 183 3.7E-35 T 12-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like M892_22185 c07a3ca52040bc1e96bdaef200f2a065 189 SUPERFAMILY SSF101874 23 188 2.22E-48 T 12-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily M892_22185 c07a3ca52040bc1e96bdaef200f2a065 189 Gene3D G3DSA:2.40.128.110 23 189 7.3E-48 T 12-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily M892_22185 c07a3ca52040bc1e96bdaef200f2a065 189 SMART SM00867 24 187 3.7E-60 T 12-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like M892_22185 c07a3ca52040bc1e96bdaef200f2a065 189 Hamap MF_00780 Protein YceI [yceI]. 1 189 44.368 T 12-10-2018 IPR023480 Uncharacterised protein family UPF0312/YceI M892_20635 00775421377df337f14ba5f4d24bea7f 204 Pfam PF00462 Glutaredoxin 109 174 3.6E-16 T 12-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 M892_20635 00775421377df337f14ba5f4d24bea7f 204 Gene3D G3DSA:3.40.30.10 109 185 3.2E-19 T 12-10-2018 M892_20635 00775421377df337f14ba5f4d24bea7f 204 SUPERFAMILY SSF52833 109 189 5.69E-18 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M892_20635 00775421377df337f14ba5f4d24bea7f 204 ProSitePatterns PS00195 Glutaredoxin active site. 110 126 - T 12-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 M892_20635 00775421377df337f14ba5f4d24bea7f 204 PRINTS PR00160 Glutaredoxin signature 171 184 2.5E-7 T 12-10-2018 IPR014025 Glutaredoxin subgroup M892_20635 00775421377df337f14ba5f4d24bea7f 204 PRINTS PR00160 Glutaredoxin signature 108 126 2.5E-7 T 12-10-2018 IPR014025 Glutaredoxin subgroup M892_20635 00775421377df337f14ba5f4d24bea7f 204 PRINTS PR00160 Glutaredoxin signature 157 170 2.5E-7 T 12-10-2018 IPR014025 Glutaredoxin subgroup M892_21035 b72b062ab675aec74cd51e52456af5d5 413 Gene3D G3DSA:3.40.50.2300 22 144 8.0E-6 T 12-10-2018 M892_21035 b72b062ab675aec74cd51e52456af5d5 413 SUPERFAMILY SSF52540 152 380 7.94E-20 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_21035 b72b062ab675aec74cd51e52456af5d5 413 Gene3D G3DSA:3.40.50.300 151 395 3.4E-20 T 12-10-2018 M892_21035 b72b062ab675aec74cd51e52456af5d5 413 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 156 366 1.0E-7 T 12-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain M892_06180 c1ba8224cffb0211d406761d6092f9e9 198 Gene3D G3DSA:3.10.180.10 6 198 2.7E-62 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M892_06180 c1ba8224cffb0211d406761d6092f9e9 198 SUPERFAMILY SSF54593 3 197 2.36E-67 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M892_06180 c1ba8224cffb0211d406761d6092f9e9 198 Pfam PF06185 YecM protein 14 196 5.7E-68 T 12-10-2018 IPR010393 Protein of unknown function DUF991 M892_19230 67d175f00df27d7d3c54d25a781e2d35 79 Gene3D G3DSA:2.40.50.100 42 79 6.5E-10 T 12-10-2018 M892_19230 67d175f00df27d7d3c54d25a781e2d35 79 Pfam PF13533 Biotin-lipoyl like 43 79 1.2E-12 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain M892_19230 67d175f00df27d7d3c54d25a781e2d35 79 SUPERFAMILY SSF111369 41 79 7.19E-8 T 12-10-2018 M892_27870 a3f39cc3bf09e161d60177b3637d32f4 189 Gene3D G3DSA:1.10.357.10 1 187 3.5E-43 T 12-10-2018 M892_27870 a3f39cc3bf09e161d60177b3637d32f4 189 SUPERFAMILY SSF48498 78 187 9.24E-16 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily M892_27870 a3f39cc3bf09e161d60177b3637d32f4 189 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 57 5.3E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M892_27870 a3f39cc3bf09e161d60177b3637d32f4 189 SUPERFAMILY SSF46689 7 82 9.75E-15 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_23140 ab69ce73877815d01902a6d48a2afd11 312 Pfam PF07394 Protein of unknown function (DUF1501) 3 291 1.6E-45 T 12-10-2018 IPR010869 Protein of unknown function DUF1501 M892_16140 dbf44250a00ccfea36ed803d60e13a64 348 Hamap MF_00462 Ion-translocating oxidoreductase complex subunit D [rsxD]. 3 348 27.162 T 12-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 M892_16140 dbf44250a00ccfea36ed803d60e13a64 348 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 8 348 4.3E-139 T 12-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 M892_16140 dbf44250a00ccfea36ed803d60e13a64 348 Pfam PF03116 NQR2, RnfD, RnfE family 6 347 1.8E-105 T 12-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 M892_17280 7c1268411ee0ec32b8b254ee99e69ca3 215 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 20 215 38.085 T 12-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 M892_17280 7c1268411ee0ec32b8b254ee99e69ca3 215 Pfam PF00925 GTP cyclohydrolase II 36 188 3.7E-59 T 12-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 M892_17280 7c1268411ee0ec32b8b254ee99e69ca3 215 Gene3D G3DSA:3.40.50.10990 21 191 7.1E-64 T 12-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 M892_17280 7c1268411ee0ec32b8b254ee99e69ca3 215 SUPERFAMILY SSF142695 36 189 1.83E-54 T 12-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 M892_03095 61e95de03e560c60642702f70888484a 239 Pfam PF02253 Phospholipase A1 5 236 5.8E-59 T 12-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 M892_03095 61e95de03e560c60642702f70888484a 239 Gene3D G3DSA:2.40.230.10 3 239 1.1E-63 T 12-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 M892_03095 61e95de03e560c60642702f70888484a 239 PRINTS PR01486 Bacterial phospholipase A1 protein signature 187 204 8.0E-22 T 12-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 M892_03095 61e95de03e560c60642702f70888484a 239 PRINTS PR01486 Bacterial phospholipase A1 protein signature 40 57 8.0E-22 T 12-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 M892_03095 61e95de03e560c60642702f70888484a 239 PRINTS PR01486 Bacterial phospholipase A1 protein signature 83 102 8.0E-22 T 12-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 M892_03095 61e95de03e560c60642702f70888484a 239 PRINTS PR01486 Bacterial phospholipase A1 protein signature 154 172 8.0E-22 T 12-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 M892_03095 61e95de03e560c60642702f70888484a 239 PRINTS PR01486 Bacterial phospholipase A1 protein signature 209 229 8.0E-22 T 12-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 M892_03095 61e95de03e560c60642702f70888484a 239 SUPERFAMILY SSF56931 5 238 7.32E-68 T 12-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 M892_13395 4168a0a5653f888219be7f9bccb2da67 192 SUPERFAMILY SSF88659 124 185 1.35E-17 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like M892_13395 4168a0a5653f888219be7f9bccb2da67 192 Gene3D G3DSA:1.10.1740.10 1 121 7.7E-46 T 12-10-2018 M892_13395 4168a0a5653f888219be7f9bccb2da67 192 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 2 190 5.0E-103 T 12-10-2018 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 M892_13395 4168a0a5653f888219be7f9bccb2da67 192 Pfam PF04542 Sigma-70 region 2 25 92 3.3E-18 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 M892_13395 4168a0a5653f888219be7f9bccb2da67 192 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 47 78 - T 12-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 M892_13395 4168a0a5653f888219be7f9bccb2da67 192 SUPERFAMILY SSF88946 2 108 1.44E-32 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 M892_13395 4168a0a5653f888219be7f9bccb2da67 192 Pfam PF08281 Sigma-70, region 4 134 181 4.2E-18 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 M892_13395 4168a0a5653f888219be7f9bccb2da67 192 Gene3D G3DSA:1.10.10.10 122 192 1.7E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_13395 4168a0a5653f888219be7f9bccb2da67 192 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 185 6.5E-33 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 M892_21120 5849fb88457917610c5f9ea5e979a127 280 SUPERFAMILY SSF161098 88 272 5.76E-40 T 12-10-2018 IPR035906 MetI-like superfamily M892_21120 5849fb88457917610c5f9ea5e979a127 280 TIGRFAM TIGR03416 ABC_choXWV_perm: choline ABC transporter, permease protein 6 272 3.6E-127 T 12-10-2018 IPR017784 ABC transporter, choline, permease protein M892_21120 5849fb88457917610c5f9ea5e979a127 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 267 2.2E-27 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M892_21120 5849fb88457917610c5f9ea5e979a127 280 Gene3D G3DSA:1.10.3720.10 86 274 2.5E-35 T 12-10-2018 IPR035906 MetI-like superfamily M892_10925 985c4d5bddb3a5b8605bc24f1be26e2b 375 SMART SM00876 256 364 3.2E-35 T 12-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 M892_10925 985c4d5bddb3a5b8605bc24f1be26e2b 375 Gene3D G3DSA:3.20.20.70 8 368 2.0E-105 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M892_10925 985c4d5bddb3a5b8605bc24f1be26e2b 375 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 256 362 3.5E-25 T 12-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 M892_10925 985c4d5bddb3a5b8605bc24f1be26e2b 375 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 3 371 3.3E-177 T 12-10-2018 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892 M892_10925 985c4d5bddb3a5b8605bc24f1be26e2b 375 Pfam PF04055 Radical SAM superfamily 81 222 6.8E-9 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 M892_10925 985c4d5bddb3a5b8605bc24f1be26e2b 375 SUPERFAMILY SSF102114 38 367 1.96E-53 T 12-10-2018 M892_06205 d5dfb775ff07da1fc689cdbb18720e8d 758 Pfam PF02421 Ferrous iron transport protein B 4 161 3.0E-58 T 12-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 M892_06205 d5dfb775ff07da1fc689cdbb18720e8d 758 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 9 687 1.9E-179 T 12-10-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 M892_06205 d5dfb775ff07da1fc689cdbb18720e8d 758 Pfam PF07664 Ferrous iron transport protein B C terminus 452 504 9.5E-19 T 12-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 M892_06205 d5dfb775ff07da1fc689cdbb18720e8d 758 SUPERFAMILY SSF52540 4 191 8.87E-39 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_06205 d5dfb775ff07da1fc689cdbb18720e8d 758 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 151 3.0E-12 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 M892_06205 d5dfb775ff07da1fc689cdbb18720e8d 758 Gene3D G3DSA:3.40.50.300 4 199 4.2E-43 T 12-10-2018 M892_06205 d5dfb775ff07da1fc689cdbb18720e8d 758 Pfam PF07670 Nucleoside recognition 349 440 2.1E-13 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 M892_06205 d5dfb775ff07da1fc689cdbb18720e8d 758 Pfam PF07670 Nucleoside recognition 509 691 4.2E-36 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 M892_03235 342999ac8666dfd745bfbe5ba49309c2 133 Pfam PF06995 Phage P2 GpU 16 131 2.4E-17 T 12-10-2018 IPR009734 Myoviridae, GpU M892_20155 21d2fd498baa4a0a19d1b354e70a65eb 334 SUPERFAMILY SSF52540 13 202 2.88E-25 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_20155 21d2fd498baa4a0a19d1b354e70a65eb 334 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 12 186 1.2E-41 T 12-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain M892_20155 21d2fd498baa4a0a19d1b354e70a65eb 334 Gene3D G3DSA:3.40.50.300 10 209 7.6E-48 T 12-10-2018 M892_09800 0561a9f76c8c880d9dc60510ad721ed2 250 Pfam PF11612 Type II secretion system (T2SS), protein J 69 206 1.7E-39 T 12-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 M892_09800 0561a9f76c8c880d9dc60510ad721ed2 250 SUPERFAMILY SSF54523 52 212 1.67E-55 T 12-10-2018 M892_09800 0561a9f76c8c880d9dc60510ad721ed2 250 Gene3D G3DSA:3.10.610.10 48 161 1.2E-36 T 12-10-2018 M892_09800 0561a9f76c8c880d9dc60510ad721ed2 250 Pfam PF07963 Prokaryotic N-terminal methylation motif 13 39 4.2E-9 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M892_09800 0561a9f76c8c880d9dc60510ad721ed2 250 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 17 208 8.9E-80 T 12-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 M892_09800 0561a9f76c8c880d9dc60510ad721ed2 250 Gene3D G3DSA:2.10.70.20 163 211 2.3E-13 T 12-10-2018 M892_09800 0561a9f76c8c880d9dc60510ad721ed2 250 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 17 39 2.7E-8 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M892_09800 0561a9f76c8c880d9dc60510ad721ed2 250 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 17 37 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M892_12845 b76f0714cf83328b261883749eacfa28 447 SUPERFAMILY SSF111283 12 447 1.11E-128 T 12-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 M892_12845 b76f0714cf83328b261883749eacfa28 447 Gene3D G3DSA:3.30.2290.10 7 232 5.7E-82 T 12-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal M892_12845 b76f0714cf83328b261883749eacfa28 447 Pfam PF01523 Putative modulator of DNA gyrase 32 324 2.2E-60 T 12-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 M892_23795 14d71399092f5fbbf50e1b0979215c98 364 Gene3D G3DSA:3.40.50.970 1 351 2.8E-100 T 12-10-2018 M892_23795 14d71399092f5fbbf50e1b0979215c98 364 SUPERFAMILY SSF52518 21 357 1.2E-90 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold M892_23795 14d71399092f5fbbf50e1b0979215c98 364 Pfam PF00676 Dehydrogenase E1 component 36 328 7.4E-74 T 12-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 M892_23795 14d71399092f5fbbf50e1b0979215c98 364 TIGRFAM TIGR03181 PDH_E1_alph_x: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 8 350 5.2E-134 T 12-10-2018 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 M892_28465 8f205ff97a7279e33c8e89cafd95aba9 255 Pfam PF03524 Conjugal transfer protein 31 226 4.8E-53 T 12-10-2018 IPR010258 Conjugal transfer, TrbG/VirB9/CagX M892_28465 8f205ff97a7279e33c8e89cafd95aba9 255 Gene3D G3DSA:2.60.40.2500 130 254 6.6E-34 T 12-10-2018 IPR038161 VirB9/CagX/TrbG, C-terminal domain superfamily M892_18530 765bb7952286010e5e53bb9021cadc37 90 SUPERFAMILY SSF116734 37 85 7.68E-11 T 12-10-2018 M892_18530 765bb7952286010e5e53bb9021cadc37 90 Gene3D G3DSA:1.10.287.1120 37 77 7.1E-11 T 12-10-2018 M892_04385 705f75d91a4a28c00e0a42455a442109 150 SMART SM00347 33 134 2.6E-18 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M892_04385 705f75d91a4a28c00e0a42455a442109 150 Pfam PF01047 MarR family 46 97 9.9E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M892_04385 705f75d91a4a28c00e0a42455a442109 150 Gene3D G3DSA:1.10.10.10 2 146 7.6E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_04385 705f75d91a4a28c00e0a42455a442109 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 124 144 3.3E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M892_04385 705f75d91a4a28c00e0a42455a442109 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 94 110 3.3E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M892_04385 705f75d91a4a28c00e0a42455a442109 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 58 74 3.3E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M892_04385 705f75d91a4a28c00e0a42455a442109 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 75 90 3.3E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M892_04385 705f75d91a4a28c00e0a42455a442109 150 ProSitePatterns PS01117 MarR-type HTH domain signature. 72 107 - T 12-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site M892_04385 705f75d91a4a28c00e0a42455a442109 150 SUPERFAMILY SSF46785 6 145 5.97E-26 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_11560 a328c4300e569be449fccdc4f4bf44cd 355 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 12-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 M892_11560 a328c4300e569be449fccdc4f4bf44cd 355 Gene3D G3DSA:3.20.20.210 1 355 1.9E-159 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 M892_11560 a328c4300e569be449fccdc4f4bf44cd 355 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 348 4.9E-140 T 12-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 M892_11560 a328c4300e569be449fccdc4f4bf44cd 355 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 348 4.9E-142 T 12-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 M892_11560 a328c4300e569be449fccdc4f4bf44cd 355 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 12-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 M892_11560 a328c4300e569be449fccdc4f4bf44cd 355 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 350 50.803 T 12-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 M892_11560 a328c4300e569be449fccdc4f4bf44cd 355 SUPERFAMILY SSF51726 1 354 3.66E-123 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 M892_06050 a5d767998b50544fe14d30f56451fcf3 539 SUPERFAMILY SSF56801 14 538 6.93E-128 T 12-10-2018 M892_06050 a5d767998b50544fe14d30f56451fcf3 539 Gene3D G3DSA:3.40.50.980 192 363 6.2E-55 T 12-10-2018 M892_06050 a5d767998b50544fe14d30f56451fcf3 539 TIGRFAM TIGR02275 DHB_AMP_lig: (2,3-dihydroxybenzoyl)adenylate synthase 10 535 6.6E-232 T 12-10-2018 IPR011963 2,3-dihydroxybenzoate-AMP ligase GO:0008668|GO:0019290 M892_06050 a5d767998b50544fe14d30f56451fcf3 539 Pfam PF00501 AMP-binding enzyme 38 445 5.7E-78 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 M892_06050 a5d767998b50544fe14d30f56451fcf3 539 Gene3D G3DSA:3.30.300.310 441 539 1.5E-29 T 12-10-2018 M892_06050 a5d767998b50544fe14d30f56451fcf3 539 Pfam PF13193 AMP-binding enzyme C-terminal domain 454 529 7.5E-14 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain M892_06050 a5d767998b50544fe14d30f56451fcf3 539 Gene3D G3DSA:2.30.38.10 364 439 9.2E-25 T 12-10-2018 M892_06050 a5d767998b50544fe14d30f56451fcf3 539 Gene3D G3DSA:3.40.50.980 28 181 3.3E-36 T 12-10-2018 M892_06050 a5d767998b50544fe14d30f56451fcf3 539 ProSitePatterns PS00455 Putative AMP-binding domain signature. 197 208 - T 12-10-2018 IPR020845 AMP-binding, conserved site M892_07945 a5dfe51c95d2911a0995514f96e5e696 357 PIRSF PIRSF001361 1 354 3.5E-164 T 12-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 M892_07945 a5dfe51c95d2911a0995514f96e5e696 357 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 9 346 3.7E-163 T 12-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 M892_07945 a5dfe51c95d2911a0995514f96e5e696 357 SUPERFAMILY SSF51569 8 345 2.2E-138 T 12-10-2018 M892_07945 a5dfe51c95d2911a0995514f96e5e696 357 Gene3D G3DSA:3.20.20.70 3 348 3.0E-157 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M892_07945 a5dfe51c95d2911a0995514f96e5e696 357 Pfam PF00793 DAHP synthetase I family 41 340 1.2E-105 T 12-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 M892_18215 0acd36886d589ab680417adf0e28491d 514 Pfam PF13005 zinc-finger binding domain of transposase IS66 120 164 1.6E-16 T 12-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 M892_18215 0acd36886d589ab680417adf0e28491d 514 Pfam PF13817 IS66 C-terminal element 474 510 7.6E-8 T 12-10-2018 IPR039552 Transposase IS66, C-terminal M892_18215 0acd36886d589ab680417adf0e28491d 514 Pfam PF13007 Transposase C of IS166 homeodomain 42 112 2.2E-14 T 12-10-2018 IPR024463 Transposase TnpC, homeodomain M892_18215 0acd36886d589ab680417adf0e28491d 514 Pfam PF03050 Transposase IS66 family 184 467 1.2E-99 T 12-10-2018 IPR004291 Transposase, IS66 M892_21300 41dea9ab25a720e9f1b9ec7c0b3b4339 311 Gene3D G3DSA:1.10.3470.10 1 311 9.0E-61 T 12-10-2018 IPR037294 ABC transporter, BtuC-like M892_21300 41dea9ab25a720e9f1b9ec7c0b3b4339 311 Pfam PF01032 FecCD transport family 8 306 2.8E-62 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 M892_21300 41dea9ab25a720e9f1b9ec7c0b3b4339 311 SUPERFAMILY SSF81345 4 306 6.8E-63 T 12-10-2018 IPR037294 ABC transporter, BtuC-like M892_19550 fb15e55b37fc64d7f111d1d2faee9bdb 330 Gene3D G3DSA:3.40.190.100 111 247 5.6E-37 T 12-10-2018 M892_19550 fb15e55b37fc64d7f111d1d2faee9bdb 330 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 26 308 9.0E-63 T 12-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 M892_19550 fb15e55b37fc64d7f111d1d2faee9bdb 330 SUPERFAMILY SSF53850 21 325 3.62E-70 T 12-10-2018 M892_19550 fb15e55b37fc64d7f111d1d2faee9bdb 330 Gene3D G3DSA:3.40.190.10 27 318 5.6E-37 T 12-10-2018 M892_14260 3907fac1f95958e0bfa3691f116155e1 796 Gene3D G3DSA:2.60.40.3110 251 322 1.6E-5 T 12-10-2018 M892_14260 3907fac1f95958e0bfa3691f116155e1 796 Pfam PF00577 Outer membrane usher protein 257 648 1.0E-11 T 12-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 M892_07800 172bacce7d04db7918051ad155d1df8d 282 SUPERFAMILY SSF55166 24 280 5.1E-93 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 M892_07800 172bacce7d04db7918051ad155d1df8d 282 PIRSF PIRSF018455 2 282 4.9E-111 T 12-10-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 M892_07800 172bacce7d04db7918051ad155d1df8d 282 Gene3D G3DSA:3.30.1380.10 22 282 2.2E-96 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 M892_07800 172bacce7d04db7918051ad155d1df8d 282 Pfam PF03411 Penicillin-insensitive murein endopeptidase 38 279 3.6E-94 T 12-10-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 M892_17035 00a7e87b9690eccb8b5c26d8ca6dc4ab 131 Pfam PF03061 Thioesterase superfamily 26 98 1.5E-20 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 M892_17035 00a7e87b9690eccb8b5c26d8ca6dc4ab 131 Gene3D G3DSA:3.10.129.10 2 131 2.0E-40 T 12-10-2018 M892_17035 00a7e87b9690eccb8b5c26d8ca6dc4ab 131 SUPERFAMILY SSF54637 9 130 3.39E-39 T 12-10-2018 IPR029069 HotDog domain superfamily M892_06025 de4d795603383630f2a759d147506e66 648 Gene3D G3DSA:2.170.130.10 34 165 9.3E-42 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily M892_06025 de4d795603383630f2a759d147506e66 648 SUPERFAMILY SSF56935 37 648 3.33E-131 T 12-10-2018 M892_06025 de4d795603383630f2a759d147506e66 648 Gene3D G3DSA:2.40.170.20 172 648 1.2E-113 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily M892_06025 de4d795603383630f2a759d147506e66 648 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 631 648 - T 12-10-2018 IPR010917 TonB-dependent receptor, conserved site M892_06025 de4d795603383630f2a759d147506e66 648 Pfam PF00593 TonB dependent receptor 239 646 4.2E-59 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel M892_06025 de4d795603383630f2a759d147506e66 648 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 161 4.1E-29 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain M892_22430 54e5a6483c7f299726f606dfb6f0cfae 150 SUPERFAMILY SSF46785 10 67 7.52E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_22430 54e5a6483c7f299726f606dfb6f0cfae 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 37 56 1.6E-15 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 M892_22430 54e5a6483c7f299726f606dfb6f0cfae 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 26 37 1.6E-15 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 M892_22430 54e5a6483c7f299726f606dfb6f0cfae 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 10 26 1.6E-15 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 M892_22430 54e5a6483c7f299726f606dfb6f0cfae 150 SMART SM00344 10 116 3.0E-26 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 M892_22430 54e5a6483c7f299726f606dfb6f0cfae 150 Pfam PF01037 Lrp/AsnC ligand binding domain 77 145 3.5E-12 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain M892_22430 54e5a6483c7f299726f606dfb6f0cfae 150 Gene3D G3DSA:3.30.70.920 74 146 5.1E-15 T 12-10-2018 M892_22430 54e5a6483c7f299726f606dfb6f0cfae 150 Pfam PF13404 AsnC-type helix-turn-helix domain 10 51 3.9E-14 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 M892_22430 54e5a6483c7f299726f606dfb6f0cfae 150 Gene3D G3DSA:1.10.10.10 3 63 7.4E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_22430 54e5a6483c7f299726f606dfb6f0cfae 150 ProSitePatterns PS00519 AsnC-type HTH domain signature. 28 54 - T 12-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site M892_22430 54e5a6483c7f299726f606dfb6f0cfae 150 SUPERFAMILY SSF54909 75 149 8.71E-12 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel M892_17305 a52d52828de9fdb2deead6b219980f43 530 Pfam PF03734 L,D-transpeptidase catalytic domain 305 471 2.5E-30 T 12-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 M892_17305 a52d52828de9fdb2deead6b219980f43 530 SUPERFAMILY SSF141523 304 465 1.57E-19 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like M892_17305 a52d52828de9fdb2deead6b219980f43 530 SUPERFAMILY SSF53955 253 324 4.84E-11 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily M892_17305 a52d52828de9fdb2deead6b219980f43 530 Pfam PF01471 Putative peptidoglycan binding domain 238 277 2.3E-9 T 12-10-2018 IPR002477 Peptidoglycan binding-like M892_14605 85847daf98cff4c4f2744e1c313778a9 725 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 29 723 1.6E-215 T 12-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 M892_14605 85847daf98cff4c4f2744e1c313778a9 725 SUPERFAMILY SSF52540 384 723 2.39E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_14605 85847daf98cff4c4f2744e1c313778a9 725 Pfam PF13604 AAA domain 258 419 5.6E-31 T 12-10-2018 M892_14605 85847daf98cff4c4f2744e1c313778a9 725 Gene3D G3DSA:3.40.50.300 224 459 1.0E-74 T 12-10-2018 M892_14605 85847daf98cff4c4f2744e1c313778a9 725 Gene3D G3DSA:3.40.50.300 590 712 2.9E-25 T 12-10-2018 M892_14605 85847daf98cff4c4f2744e1c313778a9 725 Gene3D G3DSA:3.40.50.300 469 589 9.2E-28 T 12-10-2018 M892_14605 85847daf98cff4c4f2744e1c313778a9 725 SUPERFAMILY SSF52540 31 464 8.11E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_14605 85847daf98cff4c4f2744e1c313778a9 725 Pfam PF13538 UvrD-like helicase C-terminal domain 652 697 6.7E-14 T 12-10-2018 IPR027785 UvrD-like helicase C-terminal domain M892_14605 85847daf98cff4c4f2744e1c313778a9 725 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 38 721 49.806 T 12-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 M892_14605 85847daf98cff4c4f2744e1c313778a9 725 Gene3D G3DSA:1.10.10.1020 24 144 1.0E-20 T 12-10-2018 M892_14040 1fef97ca808c5742103d0bcef411bf28 474 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 334 348 3.8E-30 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 M892_14040 1fef97ca808c5742103d0bcef411bf28 474 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 275 297 3.8E-30 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 M892_14040 1fef97ca808c5742103d0bcef411bf28 474 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 413 426 3.8E-30 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 M892_14040 1fef97ca808c5742103d0bcef411bf28 474 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 56 75 3.8E-30 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 M892_14040 1fef97ca808c5742103d0bcef411bf28 474 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 349 363 3.8E-30 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 M892_14040 1fef97ca808c5742103d0bcef411bf28 474 Gene3D G3DSA:3.40.710.10 234 467 2.1E-53 T 12-10-2018 M892_14040 1fef97ca808c5742103d0bcef411bf28 474 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 30 437 1.8E-102 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 M892_14040 1fef97ca808c5742103d0bcef411bf28 474 Gene3D G3DSA:3.50.80.20 81 174 2.1E-13 T 12-10-2018 M892_14040 1fef97ca808c5742103d0bcef411bf28 474 SUPERFAMILY SSF56601 26 438 2.82E-85 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like M892_14040 1fef97ca808c5742103d0bcef411bf28 474 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 52 436 3.2E-104 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 M892_10785 9df328af9b993bccf986e10f43f84844 172 Hamap MF_00163 Peptide deformylase [def]. 2 162 31.003 T 12-10-2018 IPR023635 Peptide deformylase M892_10785 9df328af9b993bccf986e10f43f84844 172 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 159 1.5E-61 T 12-10-2018 IPR023635 Peptide deformylase M892_10785 9df328af9b993bccf986e10f43f84844 172 PIRSF PIRSF004749 1 172 9.4E-56 T 12-10-2018 IPR023635 Peptide deformylase M892_10785 9df328af9b993bccf986e10f43f84844 172 PRINTS PR01576 Peptide deformylase signature 120 149 2.7E-37 T 12-10-2018 IPR023635 Peptide deformylase M892_10785 9df328af9b993bccf986e10f43f84844 172 PRINTS PR01576 Peptide deformylase signature 33 62 2.7E-37 T 12-10-2018 IPR023635 Peptide deformylase M892_10785 9df328af9b993bccf986e10f43f84844 172 PRINTS PR01576 Peptide deformylase signature 101 119 2.7E-37 T 12-10-2018 IPR023635 Peptide deformylase M892_10785 9df328af9b993bccf986e10f43f84844 172 PRINTS PR01576 Peptide deformylase signature 89 100 2.7E-37 T 12-10-2018 IPR023635 Peptide deformylase M892_10785 9df328af9b993bccf986e10f43f84844 172 SUPERFAMILY SSF56420 3 165 1.05E-62 T 12-10-2018 IPR036821 Peptide deformylase superfamily M892_10785 9df328af9b993bccf986e10f43f84844 172 Pfam PF01327 Polypeptide deformylase 4 152 7.4E-51 T 12-10-2018 IPR023635 Peptide deformylase M892_10785 9df328af9b993bccf986e10f43f84844 172 Gene3D G3DSA:3.90.45.10 1 169 8.1E-67 T 12-10-2018 IPR036821 Peptide deformylase superfamily M892_19315 0d8b12e426d64f57db4e43223aa8b241 266 Gene3D G3DSA:3.10.310.10 6 262 1.1E-87 T 12-10-2018 M892_19315 0d8b12e426d64f57db4e43223aa8b241 266 Gene3D G3DSA:3.10.310.10 116 254 1.1E-87 T 12-10-2018 M892_19315 0d8b12e426d64f57db4e43223aa8b241 266 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 2 266 1.7E-44 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 M892_19315 0d8b12e426d64f57db4e43223aa8b241 266 PIRSF PIRSF016184 1 266 9.3E-54 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 M892_19315 0d8b12e426d64f57db4e43223aa8b241 266 Pfam PF02567 Phenazine biosynthesis-like protein 8 262 2.0E-66 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 M892_19315 0d8b12e426d64f57db4e43223aa8b241 266 SUPERFAMILY SSF54506 1 264 2.18E-71 T 12-10-2018 M892_23075 b6a617e6934b9155519390e9a34558fd 156 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 2 152 6.6E-61 T 12-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 M892_23075 b6a617e6934b9155519390e9a34558fd 156 ProSitePatterns PS01087 Radical activating enzymes signature. 14 35 - T 12-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 M892_23075 b6a617e6934b9155519390e9a34558fd 156 SUPERFAMILY SSF102114 23 125 2.88E-8 T 12-10-2018 M892_23075 b6a617e6934b9155519390e9a34558fd 156 Gene3D G3DSA:3.20.20.70 2 156 1.4E-22 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M892_23075 b6a617e6934b9155519390e9a34558fd 156 Pfam PF13353 4Fe-4S single cluster domain 12 151 2.5E-51 T 12-10-2018 M892_23075 b6a617e6934b9155519390e9a34558fd 156 PIRSF PIRSF000368 1 156 3.7E-59 T 12-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 M892_06885 427648326a846327e9a65fdf0254916d 373 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 16 369 28.146 T 12-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 M892_06885 427648326a846327e9a65fdf0254916d 373 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 20 367 7.0E-135 T 12-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 M892_06885 427648326a846327e9a65fdf0254916d 373 Pfam PF01098 Cell cycle protein 23 367 1.6E-112 T 12-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 M892_06885 427648326a846327e9a65fdf0254916d 373 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 324 348 - T 12-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 M892_24845 1444d6cde12c11ea136713fe015c0c94 347 SUPERFAMILY SSF46689 16 131 2.09E-25 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_24845 1444d6cde12c11ea136713fe015c0c94 347 SUPERFAMILY SSF53098 221 318 1.82E-7 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_24845 1444d6cde12c11ea136713fe015c0c94 347 Gene3D G3DSA:3.30.420.470 137 340 1.9E-11 T 12-10-2018 M892_24845 1444d6cde12c11ea136713fe015c0c94 347 Pfam PF13551 Winged helix-turn helix 32 87 2.3E-8 T 12-10-2018 M892_24845 1444d6cde12c11ea136713fe015c0c94 347 Pfam PF13592 Winged helix-turn helix 98 155 7.3E-20 T 12-10-2018 IPR025959 Winged helix-turn helix domain M892_24845 1444d6cde12c11ea136713fe015c0c94 347 Pfam PF13358 DDE superfamily endonuclease 169 312 6.0E-34 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_11220 a690eee85b9bd72602d563b9da81d147 405 Pfam PF07690 Major Facilitator Superfamily 18 337 1.0E-19 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 M892_11220 a690eee85b9bd72602d563b9da81d147 405 Gene3D G3DSA:1.20.1250.20 8 201 1.7E-14 T 12-10-2018 M892_11220 a690eee85b9bd72602d563b9da81d147 405 Gene3D G3DSA:1.20.1250.20 207 403 2.3E-11 T 12-10-2018 M892_11220 a690eee85b9bd72602d563b9da81d147 405 SUPERFAMILY SSF103473 9 399 5.36E-33 T 12-10-2018 IPR036259 MFS transporter superfamily M892_02440 7e251e8788408f701a3f130f63751670 222 Gene3D G3DSA:3.40.30.10 7 83 1.9E-24 T 12-10-2018 M892_02440 7e251e8788408f701a3f130f63751670 222 Gene3D G3DSA:1.20.1050.10 89 222 7.8E-45 T 12-10-2018 M892_02440 7e251e8788408f701a3f130f63751670 222 SUPERFAMILY SSF47616 88 220 1.81E-25 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily M892_02440 7e251e8788408f701a3f130f63751670 222 SUPERFAMILY SSF52833 5 90 4.94E-22 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M892_02440 7e251e8788408f701a3f130f63751670 222 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 6 220 1.2E-82 T 12-10-2018 IPR005955 Glutathione S-transferases, class Zeta GO:0003824|GO:0005737|GO:0009072 Reactome: R-HSA-156590|Reactome: R-HSA-204174|Reactome: R-HSA-71182 M892_02440 7e251e8788408f701a3f130f63751670 222 Pfam PF13417 Glutathione S-transferase, N-terminal domain 7 84 4.4E-14 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 M892_05280 bf5bddbefe1c34a643313a322e6b6c49 236 Gene3D G3DSA:2.30.210.20 5 62 1.9E-23 T 12-10-2018 M892_05280 bf5bddbefe1c34a643313a322e6b6c49 236 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 37 216 1.1E-74 T 12-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 M892_05280 bf5bddbefe1c34a643313a322e6b6c49 236 Gene3D G3DSA:3.40.630.70 63 235 5.2E-62 T 12-10-2018 M892_05280 bf5bddbefe1c34a643313a322e6b6c49 236 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 236 89.819 T 12-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 M892_05280 bf5bddbefe1c34a643313a322e6b6c49 236 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 36 204 2.4E-69 T 12-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 M892_05280 bf5bddbefe1c34a643313a322e6b6c49 236 SUPERFAMILY SSF55729 5 229 4.82E-87 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_25710 52ad1355b58f40cfbde3210f37eebcbd 393 Gene3D G3DSA:1.20.1250.20 6 198 2.3E-7 T 12-10-2018 M892_25710 52ad1355b58f40cfbde3210f37eebcbd 393 SUPERFAMILY SSF103473 6 378 2.88E-36 T 12-10-2018 IPR036259 MFS transporter superfamily M892_25710 52ad1355b58f40cfbde3210f37eebcbd 393 Pfam PF07690 Major Facilitator Superfamily 15 345 3.3E-14 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 M892_25710 52ad1355b58f40cfbde3210f37eebcbd 393 Gene3D G3DSA:1.20.1250.20 200 386 3.0E-15 T 12-10-2018 M892_06550 cdad4cd9cffcfed274aa4259ce12187f 308 SMART SM00047 146 307 1.7E-50 T 12-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 M892_06550 cdad4cd9cffcfed274aa4259ce12187f 308 Pfam PF10135 Rod binding protein 53 102 6.3E-16 T 12-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal M892_06550 cdad4cd9cffcfed274aa4259ce12187f 308 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 10 305 2.3E-126 T 12-10-2018 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 M892_06550 cdad4cd9cffcfed274aa4259ce12187f 308 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 169 305 3.3E-21 T 12-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 M892_06550 cdad4cd9cffcfed274aa4259ce12187f 308 Gene3D G3DSA:1.10.530.10 160 306 9.3E-46 T 12-10-2018 M892_06550 cdad4cd9cffcfed274aa4259ce12187f 308 PRINTS PR01002 Flagellar protein FlgJ signature 245 266 1.4E-29 T 12-10-2018 M892_06550 cdad4cd9cffcfed274aa4259ce12187f 308 PRINTS PR01002 Flagellar protein FlgJ signature 223 244 1.4E-29 T 12-10-2018 M892_06550 cdad4cd9cffcfed274aa4259ce12187f 308 PRINTS PR01002 Flagellar protein FlgJ signature 288 306 1.4E-29 T 12-10-2018 M892_06550 cdad4cd9cffcfed274aa4259ce12187f 308 PRINTS PR01002 Flagellar protein FlgJ signature 79 101 1.4E-29 T 12-10-2018 M892_06550 cdad4cd9cffcfed274aa4259ce12187f 308 PRINTS PR01002 Flagellar protein FlgJ signature 182 200 1.4E-29 T 12-10-2018 M892_06550 cdad4cd9cffcfed274aa4259ce12187f 308 PRINTS PR01002 Flagellar protein FlgJ signature 31 54 1.4E-29 T 12-10-2018 M892_07665 baaa01eb067351c670c7391e27a0a9f9 607 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 112 593 5.1E-151 T 12-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 M892_07665 baaa01eb067351c670c7391e27a0a9f9 607 Pfam PF02355 Protein export membrane protein 425 586 1.5E-17 T 12-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial M892_07665 baaa01eb067351c670c7391e27a0a9f9 607 SUPERFAMILY SSF82866 402 598 3.53E-44 T 12-10-2018 M892_07665 baaa01eb067351c670c7391e27a0a9f9 607 Gene3D G3DSA:1.20.1640.10 440 590 2.1E-7 T 12-10-2018 M892_07665 baaa01eb067351c670c7391e27a0a9f9 607 PRINTS PR00702 Acriflavin resistance protein family signature 441 464 2.8E-5 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_07665 baaa01eb067351c670c7391e27a0a9f9 607 PRINTS PR00702 Acriflavin resistance protein family signature 495 519 2.8E-5 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_07665 baaa01eb067351c670c7391e27a0a9f9 607 PRINTS PR00702 Acriflavin resistance protein family signature 570 593 2.8E-5 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_07665 baaa01eb067351c670c7391e27a0a9f9 607 Pfam PF13721 SecD export protein N-terminal TM region 1 92 3.5E-28 T 12-10-2018 IPR027398 SecD export protein N-terminal TM domain M892_07665 baaa01eb067351c670c7391e27a0a9f9 607 Pfam PF07549 SecD/SecF GG Motif 105 130 2.5E-7 T 12-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site M892_07665 baaa01eb067351c670c7391e27a0a9f9 607 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 1 607 46.798 T 12-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 M892_07665 baaa01eb067351c670c7391e27a0a9f9 607 Gene3D G3DSA:3.30.1360.200 270 423 6.3E-51 T 12-10-2018 M892_07665 baaa01eb067351c670c7391e27a0a9f9 607 Gene3D G3DSA:3.30.70.3400 211 429 6.3E-51 T 12-10-2018 M892_07665 baaa01eb067351c670c7391e27a0a9f9 607 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 337 586 2.9E-82 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial M892_07805 1a83d9886c88e37f26da8c6812407659 110 SUPERFAMILY SSF55331 1 110 1.04E-37 T 12-10-2018 IPR014347 Tautomerase/MIF superfamily M892_07805 1a83d9886c88e37f26da8c6812407659 110 Pfam PF08921 Domain of unknown function (DUF1904) 1 109 3.8E-38 T 12-10-2018 IPR015017 Protein of unknown function DUF1904 M892_07805 1a83d9886c88e37f26da8c6812407659 110 Gene3D G3DSA:3.30.429.10 1 110 7.9E-45 T 12-10-2018 IPR014347 Tautomerase/MIF superfamily M892_09920 e43fc7acbe9413b7b58252ac6ddc42a3 334 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 6 330 1.4E-120 T 12-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 M892_09920 e43fc7acbe9413b7b58252ac6ddc42a3 334 Pfam PF00962 Adenosine/AMP deaminase 5 328 5.5E-90 T 12-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 M892_09920 e43fc7acbe9413b7b58252ac6ddc42a3 334 Gene3D G3DSA:3.20.20.140 1 334 7.3E-97 T 12-10-2018 M892_09920 e43fc7acbe9413b7b58252ac6ddc42a3 334 SUPERFAMILY SSF51556 3 325 3.44E-75 T 12-10-2018 IPR032466 Metal-dependent hydrolase M892_09920 e43fc7acbe9413b7b58252ac6ddc42a3 334 Hamap MF_00540 Adenosine deaminase [add]. 1 331 54.84 T 12-10-2018 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217 M892_05185 7e5b6da57d149ba7d6802c2f2408ba86 241 Gene3D G3DSA:1.10.10.2250 1 78 2.2E-34 T 12-10-2018 M892_05185 7e5b6da57d149ba7d6802c2f2408ba86 241 Hamap MF_01802 Chromosome partition protein MukE [mukE]. 10 238 49.597 T 12-10-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 M892_05185 7e5b6da57d149ba7d6802c2f2408ba86 241 Gene3D G3DSA:1.10.10.2260 88 194 2.6E-49 T 12-10-2018 M892_05185 7e5b6da57d149ba7d6802c2f2408ba86 241 Pfam PF04288 MukE-like family 10 235 1.5E-118 T 12-10-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 M892_07400 31e214d9a0cdefbbf1edafbec929a621 680 Pfam PF12805 FUSC-like inner membrane protein yccS 71 329 8.2E-19 T 12-10-2018 IPR032692 Integral membrane protein YccS, N-terminal M892_07400 31e214d9a0cdefbbf1edafbec929a621 680 Pfam PF13515 Fusaric acid resistance protein-like 376 496 5.1E-17 T 12-10-2018 M892_00930 670ca0e0d09a8d77f684081b2f1a315b 1345 SMART SM00487 123 307 2.3E-31 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain M892_00930 670ca0e0d09a8d77f684081b2f1a315b 1345 Pfam PF11898 Domain of unknown function (DUF3418) 759 1343 3.5E-229 T 12-10-2018 IPR024590 RNA helicase HrpA, C-terminal M892_00930 670ca0e0d09a8d77f684081b2f1a315b 1345 SUPERFAMILY SSF52540 122 647 1.11E-115 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_00930 670ca0e0d09a8d77f684081b2f1a315b 1345 Gene3D G3DSA:3.40.50.300 301 468 3.5E-55 T 12-10-2018 M892_00930 670ca0e0d09a8d77f684081b2f1a315b 1345 Pfam PF00270 DEAD/DEAH box helicase 135 281 4.1E-8 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 M892_00930 670ca0e0d09a8d77f684081b2f1a315b 1345 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 62 1343 0.0 T 12-10-2018 IPR010222 RNA helicase HrpA GO:0004004 M892_00930 670ca0e0d09a8d77f684081b2f1a315b 1345 Gene3D G3DSA:3.40.50.300 72 300 1.2E-78 T 12-10-2018 M892_00930 670ca0e0d09a8d77f684081b2f1a315b 1345 Gene3D G3DSA:1.20.120.1080 496 596 7.0E-18 T 12-10-2018 M892_00930 670ca0e0d09a8d77f684081b2f1a315b 1345 SMART SM00490 351 451 7.4E-15 T 12-10-2018 IPR001650 Helicase, C-terminal M892_00930 670ca0e0d09a8d77f684081b2f1a315b 1345 SMART SM00382 140 431 4.9E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_00930 670ca0e0d09a8d77f684081b2f1a315b 1345 Pfam PF04408 Helicase associated domain (HA2) 513 604 5.7E-18 T 12-10-2018 IPR007502 Helicase-associated domain GO:0004386 M892_00930 670ca0e0d09a8d77f684081b2f1a315b 1345 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 669 745 6.7E-23 T 12-10-2018 IPR011709 Domain of unknown function DUF1605 M892_00930 670ca0e0d09a8d77f684081b2f1a315b 1345 SMART SM00847 511 606 3.6E-36 T 12-10-2018 IPR007502 Helicase-associated domain GO:0004386 M892_00930 670ca0e0d09a8d77f684081b2f1a315b 1345 Pfam PF00271 Helicase conserved C-terminal domain 336 450 2.3E-11 T 12-10-2018 IPR001650 Helicase, C-terminal M892_16555 192f62f0dcab334bd2d6f23f95147e57 549 Gene3D G3DSA:3.40.50.1820 19 547 2.7E-104 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_16555 192f62f0dcab334bd2d6f23f95147e57 549 ProSitePatterns PS00122 Carboxylesterases type-B serine active site. 202 217 - T 12-10-2018 IPR019826 Carboxylesterase type B, active site M892_16555 192f62f0dcab334bd2d6f23f95147e57 549 Pfam PF00135 Carboxylesterase family 25 510 3.4E-84 T 12-10-2018 IPR002018 Carboxylesterase, type B M892_16555 192f62f0dcab334bd2d6f23f95147e57 549 SUPERFAMILY SSF53474 23 509 3.63E-84 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_05795 8f24ab411515c226a510466d3b6b629e 100 SUPERFAMILY SSF46767 2 84 5.23E-25 T 12-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 M892_05795 8f24ab411515c226a510466d3b6b629e 100 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 4 83 4.0E-24 T 12-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 M892_05795 8f24ab411515c226a510466d3b6b629e 100 Gene3D G3DSA:1.10.10.10 1 100 8.7E-40 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_22075 ccc92909a0ac810c94390873a1bd8ada 411 Gene3D G3DSA:3.40.50.1970 29 209 7.9E-50 T 12-10-2018 M892_22075 ccc92909a0ac810c94390873a1bd8ada 411 SUPERFAMILY SSF56796 31 406 4.19E-97 T 12-10-2018 M892_22075 ccc92909a0ac810c94390873a1bd8ada 411 Gene3D G3DSA:1.20.1090.10 210 409 5.6E-32 T 12-10-2018 M892_22075 ccc92909a0ac810c94390873a1bd8ada 411 Pfam PF00465 Iron-containing alcohol dehydrogenase 37 386 1.8E-80 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 M892_06605 d97f9d454eb9400b8ae75e90caece036 248 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 114 246 5.9E-42 T 12-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal M892_06605 d97f9d454eb9400b8ae75e90caece036 248 SMART SM00858 126 188 3.9E-10 T 12-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 M892_06605 d97f9d454eb9400b8ae75e90caece036 248 Gene3D G3DSA:2.30.30.760 188 248 2.5E-12 T 12-10-2018 M892_06605 d97f9d454eb9400b8ae75e90caece036 248 Pfam PF13144 Chaperone for flagella basal body P-ring formation 49 246 3.7E-55 T 12-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal M892_09215 e1572c52a15f3d15e352081889bf5563 200 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 12 197 9.1E-75 T 12-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_09215 e1572c52a15f3d15e352081889bf5563 200 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 6 200 33.276 T 12-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_09215 e1572c52a15f3d15e352081889bf5563 200 SUPERFAMILY SSF52166 9 199 1.83E-71 T 12-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 M892_09215 e1572c52a15f3d15e352081889bf5563 200 Gene3D G3DSA:3.40.1370.10 5 200 1.9E-68 T 12-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 M892_09215 e1572c52a15f3d15e352081889bf5563 200 Pfam PF00573 Ribosomal protein L4/L1 family 12 197 9.7E-64 T 12-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 M892_24350 4525dc4f98c79748a2ea159aa1ab90c0 666 SUPERFAMILY SSF58104 361 665 6.41E-65 T 12-10-2018 M892_24350 4525dc4f98c79748a2ea159aa1ab90c0 666 SMART SM00283 403 664 3.1E-59 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M892_24350 4525dc4f98c79748a2ea159aa1ab90c0 666 Gene3D G3DSA:1.10.287.950 335 666 7.0E-65 T 12-10-2018 M892_24350 4525dc4f98c79748a2ea159aa1ab90c0 666 Pfam PF12729 Four helix bundle sensory module for signal transduction 2 162 7.3E-14 T 12-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain M892_24350 4525dc4f98c79748a2ea159aa1ab90c0 666 Pfam PF00672 HAMP domain 337 379 7.7E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M892_24350 4525dc4f98c79748a2ea159aa1ab90c0 666 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 478 625 2.1E-42 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M892_24350 4525dc4f98c79748a2ea159aa1ab90c0 666 SMART SM00304 335 388 1.6E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M892_08110 43b17366bcbd246ea9f479e7fb00e2cb 260 SUPERFAMILY SSF75620 2 257 2.22E-116 T 12-10-2018 M892_08110 43b17366bcbd246ea9f479e7fb00e2cb 260 Gene3D G3DSA:3.30.160.20 121 216 6.1E-96 T 12-10-2018 M892_08110 43b17366bcbd246ea9f479e7fb00e2cb 260 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 1 258 7.4E-139 T 12-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 M892_08110 43b17366bcbd246ea9f479e7fb00e2cb 260 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 140 156 - T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 M892_08110 43b17366bcbd246ea9f479e7fb00e2cb 260 Gene3D G3DSA:3.30.70.1660 25 252 6.1E-96 T 12-10-2018 M892_08110 43b17366bcbd246ea9f479e7fb00e2cb 260 SMART SM00937 1 90 2.4E-36 T 12-10-2018 IPR005139 Peptide chain release factor GO:0006415 M892_08110 43b17366bcbd246ea9f479e7fb00e2cb 260 Pfam PF00472 RF-1 domain 124 232 1.0E-40 T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 M892_08110 43b17366bcbd246ea9f479e7fb00e2cb 260 Pfam PF03462 PCRF domain 1 114 7.3E-44 T 12-10-2018 IPR005139 Peptide chain release factor GO:0006415 M892_01980 9abf9772b80a6c88b40e4fd416886e18 67 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 10 38 2.6E-5 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal M892_01980 9abf9772b80a6c88b40e4fd416886e18 67 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 10 32 5.1E-5 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal M892_01980 9abf9772b80a6c88b40e4fd416886e18 67 TIGRFAM TIGR02811 formate_TAT: formate dehydrogenase region TAT target 2 67 2.3E-33 T 12-10-2018 IPR014177 Putative formate dehydrogenase, TAT signal-containing M892_01980 9abf9772b80a6c88b40e4fd416886e18 67 PIRSF PIRSF036704 1 67 3.0E-35 T 12-10-2018 IPR014177 Putative formate dehydrogenase, TAT signal-containing M892_24400 39519d693fbb14198864c93d1348166a 181 Gene3D G3DSA:3.10.640.10 1 177 4.6E-64 T 12-10-2018 IPR038590 YaeQ superfamily M892_24400 39519d693fbb14198864c93d1348166a 181 Pfam PF07152 YaeQ protein 1 171 8.7E-64 T 12-10-2018 IPR009822 YaeQ M892_24400 39519d693fbb14198864c93d1348166a 181 SMART SM01322 1 174 9.1E-92 T 12-10-2018 IPR009822 YaeQ M892_24400 39519d693fbb14198864c93d1348166a 181 PIRSF PIRSF011484 1 179 7.9E-62 T 12-10-2018 IPR009822 YaeQ M892_24400 39519d693fbb14198864c93d1348166a 181 SUPERFAMILY SSF52980 2 178 6.7E-62 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 M892_05720 94f20d0885adbd952aab4d851d3be80b 299 Gene3D G3DSA:1.10.530.40 83 279 1.1E-11 T 12-10-2018 M892_05720 94f20d0885adbd952aab4d851d3be80b 299 Pfam PF16754 Bacterial toxin homologue of phage lysozyme, C-term 97 234 5.5E-6 T 12-10-2018 IPR031922 Bacterial toxin homologue of phage lysozyme, C-terminal M892_09470 873e34d7f0171a6523df68b2c7f4cfd3 352 Gene3D G3DSA:3.10.580.10 1 113 7.9E-21 T 12-10-2018 M892_09470 873e34d7f0171a6523df68b2c7f4cfd3 352 SUPERFAMILY SSF54631 7 56 2.61E-8 T 12-10-2018 M892_09470 873e34d7f0171a6523df68b2c7f4cfd3 352 Pfam PF00483 Nucleotidyl transferase 124 346 2.3E-37 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 M892_09470 873e34d7f0171a6523df68b2c7f4cfd3 352 SUPERFAMILY SSF53448 49 347 1.57E-69 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M892_09470 873e34d7f0171a6523df68b2c7f4cfd3 352 SMART SM00116 70 117 49.0 T 12-10-2018 IPR000644 CBS domain M892_09470 873e34d7f0171a6523df68b2c7f4cfd3 352 SMART SM00116 6 54 0.0079 T 12-10-2018 IPR000644 CBS domain M892_09470 873e34d7f0171a6523df68b2c7f4cfd3 352 Gene3D G3DSA:3.90.550.10 121 348 4.4E-63 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M892_09470 873e34d7f0171a6523df68b2c7f4cfd3 352 Pfam PF00571 CBS domain 8 53 6.8E-8 T 12-10-2018 IPR000644 CBS domain M892_13830 17267d1b196dca452be1415ef295f0f0 313 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 12 303 1.1E-70 T 12-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 M892_13830 17267d1b196dca452be1415ef295f0f0 313 PIRSF PIRSF026649 8 310 1.3E-75 T 12-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 M892_13830 17267d1b196dca452be1415ef295f0f0 313 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 10 312 44.455 T 12-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 M892_13830 17267d1b196dca452be1415ef295f0f0 313 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 12 312 1.1E-131 T 12-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 M892_15950 26c44eaa6f14a4bdc77c10493a3a6834 194 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 82 3.4E-34 T 12-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 M892_15950 26c44eaa6f14a4bdc77c10493a3a6834 194 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 158 165 - T 12-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 M892_15950 26c44eaa6f14a4bdc77c10493a3a6834 194 Gene3D G3DSA:2.40.500.20 83 194 9.0E-43 T 12-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 M892_15950 26c44eaa6f14a4bdc77c10493a3a6834 194 SUPERFAMILY SSF54719 84 193 1.28E-43 T 12-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 M892_15950 26c44eaa6f14a4bdc77c10493a3a6834 194 SUPERFAMILY SSF46609 1 84 4.71E-35 T 12-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 M892_15950 26c44eaa6f14a4bdc77c10493a3a6834 194 Gene3D G3DSA:1.10.287.990 20 82 7.3E-25 T 12-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 M892_15950 26c44eaa6f14a4bdc77c10493a3a6834 194 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 190 7.4E-39 T 12-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 M892_15950 26c44eaa6f14a4bdc77c10493a3a6834 194 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.5E-21 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 M892_15950 26c44eaa6f14a4bdc77c10493a3a6834 194 PRINTS PR01703 Manganese superoxide dismutase signature 156 168 1.5E-21 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 M892_15950 26c44eaa6f14a4bdc77c10493a3a6834 194 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.5E-21 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 M892_15950 26c44eaa6f14a4bdc77c10493a3a6834 194 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 1.5E-21 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 M892_15950 26c44eaa6f14a4bdc77c10493a3a6834 194 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 1.5E-21 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 M892_15950 26c44eaa6f14a4bdc77c10493a3a6834 194 PIRSF PIRSF000349 1 194 1.1E-84 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 M892_05820 6af501ef26c33756739ea6d859d586ea 105 SUPERFAMILY SSF158757 8 85 4.05E-36 T 12-10-2018 IPR036810 SMc04008-like superfamily M892_05820 6af501ef26c33756739ea6d859d586ea 105 Gene3D G3DSA:1.10.3340.10 4 105 5.2E-46 T 12-10-2018 IPR036810 SMc04008-like superfamily M892_05820 6af501ef26c33756739ea6d859d586ea 105 Pfam PF06844 Protein of unknown function (DUF1244) 35 101 6.9E-36 T 12-10-2018 IPR023163 SMc04008-like domain M892_20950 e82f46c34449e4b986d1f7e3c7831ca4 199 Gene3D G3DSA:1.10.8.890 108 143 1.5E-15 T 12-10-2018 M892_20950 e82f46c34449e4b986d1f7e3c7831ca4 199 Gene3D G3DSA:3.30.70.2540 4 189 1.5E-15 T 12-10-2018 M892_20950 e82f46c34449e4b986d1f7e3c7831ca4 199 TIGRFAM TIGR02563 cas_Csy4: CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST 4 198 2.9E-40 T 12-10-2018 IPR013396 CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST GO:0004519|GO:0043571 M892_20950 e82f46c34449e4b986d1f7e3c7831ca4 199 Pfam PF09618 CRISPR-associated protein (Cas_Csy4) 5 189 2.9E-28 T 12-10-2018 IPR013396 CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST GO:0004519|GO:0043571 M892_07935 f7c0d841db5958a0fb71f5886773a534 333 SUPERFAMILY SSF51261 84 271 2.75E-51 T 12-10-2018 IPR011055 Duplicated hybrid motif M892_07935 f7c0d841db5958a0fb71f5886773a534 333 Pfam PF01551 Peptidase family M23 174 269 7.3E-29 T 12-10-2018 IPR016047 Peptidase M23 M892_07935 f7c0d841db5958a0fb71f5886773a534 333 Gene3D G3DSA:2.70.70.10 121 275 3.7E-41 T 12-10-2018 IPR011055 Duplicated hybrid motif M892_00025 641f425ec2f9fc62fb24ef6c11ece244 428 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 9 423 4.4E-101 T 12-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit M892_00025 641f425ec2f9fc62fb24ef6c11ece244 428 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 422 2.1E-106 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 M892_00025 641f425ec2f9fc62fb24ef6c11ece244 428 PIRSF PIRSF006066 1 427 2.1E-74 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 M892_02750 02f2176c401477070cebb8f7c17f4dff 263 Pfam PF00149 Calcineurin-like phosphoesterase 19 203 4.1E-11 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 M892_02750 02f2176c401477070cebb8f7c17f4dff 263 Gene3D G3DSA:3.60.21.10 4 262 5.1E-46 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like M892_02750 02f2176c401477070cebb8f7c17f4dff 263 SUPERFAMILY SSF56300 16 251 9.72E-35 T 12-10-2018 M892_13070 0e546b044950f5d38be46011f74e2f9a 447 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 19 427 2.2E-114 T 12-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 M892_13070 0e546b044950f5d38be46011f74e2f9a 447 Pfam PF02378 Phosphotransferase system, EIIC 35 354 1.0E-63 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 M892_13070 0e546b044950f5d38be46011f74e2f9a 447 PIRSF PIRSF006351 7 438 1.4E-146 T 12-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 M892_16295 aeb38bf042d2b3013e9f36ddfd41a3bc 486 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 330 484 2.7E-39 T 12-10-2018 IPR000160 GGDEF domain M892_16295 aeb38bf042d2b3013e9f36ddfd41a3bc 486 SMART SM00267 321 486 1.4E-32 T 12-10-2018 IPR000160 GGDEF domain M892_16295 aeb38bf042d2b3013e9f36ddfd41a3bc 486 SUPERFAMILY SSF55073 337 485 2.51E-35 T 12-10-2018 IPR029787 Nucleotide cyclase M892_16295 aeb38bf042d2b3013e9f36ddfd41a3bc 486 Pfam PF00990 Diguanylate cyclase, GGDEF domain 332 483 1.8E-32 T 12-10-2018 IPR000160 GGDEF domain M892_16295 aeb38bf042d2b3013e9f36ddfd41a3bc 486 Gene3D G3DSA:3.30.70.270 320 486 8.5E-43 T 12-10-2018 M892_16785 15ca3f465031b75ce70db5b25089aa1b 204 SUPERFAMILY SSF53098 4 177 1.4E-52 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_16785 15ca3f465031b75ce70db5b25089aa1b 204 SMART SM00479 6 173 1.7E-40 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III M892_16785 15ca3f465031b75ce70db5b25089aa1b 204 Pfam PF00929 Exonuclease 8 163 5.4E-30 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III M892_16785 15ca3f465031b75ce70db5b25089aa1b 204 Gene3D G3DSA:3.30.420.10 2 175 5.4E-48 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M892_16785 15ca3f465031b75ce70db5b25089aa1b 204 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 7 175 7.0E-29 T 12-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M892_09580 4d19033ab1d1ec29c25dc79e432d1ed8 224 SUPERFAMILY SSF47781 17 91 1.46E-10 T 12-10-2018 IPR010994 RuvA domain 2-like M892_09580 4d19033ab1d1ec29c25dc79e432d1ed8 224 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 12-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site M892_09580 4d19033ab1d1ec29c25dc79e432d1ed8 224 SUPERFAMILY SSF102712 134 190 8.76E-5 T 12-10-2018 M892_09580 4d19033ab1d1ec29c25dc79e432d1ed8 224 Pfam PF04002 RadC-like JAB domain 104 222 1.1E-44 T 12-10-2018 IPR025657 RadC-like JAB domain M892_09580 4d19033ab1d1ec29c25dc79e432d1ed8 224 Gene3D G3DSA:3.40.140.10 101 224 5.4E-43 T 12-10-2018 M892_09580 4d19033ab1d1ec29c25dc79e432d1ed8 224 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 224 1.2E-77 T 12-10-2018 IPR001405 Uncharacterised protein family UPF0758 M892_15425 7a5996881de3b3eec1ec345371acb353 405 SUPERFAMILY SSF48452 161 265 2.49E-11 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_15425 7a5996881de3b3eec1ec345371acb353 405 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 3 116 1.9E-30 T 12-10-2018 IPR017560 Cytochrome c-type biogenesis protein CcmI M892_15425 7a5996881de3b3eec1ec345371acb353 405 Pfam PF14559 Tetratricopeptide repeat 176 244 4.6E-8 T 12-10-2018 M892_15425 7a5996881de3b3eec1ec345371acb353 405 Gene3D G3DSA:1.25.40.10 153 292 3.7E-15 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_18985 41008f1cc9143d5d66aceddaa28c8a00 490 Pfam PF01381 Helix-turn-helix 18 51 6.3E-7 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 M892_18985 41008f1cc9143d5d66aceddaa28c8a00 490 SUPERFAMILY SSF47413 18 56 4.22E-7 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 M892_18985 41008f1cc9143d5d66aceddaa28c8a00 490 Gene3D G3DSA:1.10.260.40 2 65 4.5E-7 T 12-10-2018 M892_18985 41008f1cc9143d5d66aceddaa28c8a00 490 Pfam PF06114 IrrE N-terminal-like domain 160 298 4.2E-6 T 12-10-2018 IPR010359 IrrE N-terminal-like domain M892_18985 41008f1cc9143d5d66aceddaa28c8a00 490 Pfam PF12268 Protein of unknown function (DUF3612) 299 473 1.1E-105 T 12-10-2018 IPR022055 Protein of unknown function DUF3612 M892_10065 ec27e009f41e28ef3f8e0265d4b35cb3 132 Pfam PF01609 Transposase DDE domain 3 118 1.3E-6 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_03665 137448cf9e26e4cb1ad89d0d24496977 453 Gene3D G3DSA:3.30.1330.90 10 159 2.3E-49 T 12-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 M892_03665 137448cf9e26e4cb1ad89d0d24496977 453 Pfam PF03315 Serine dehydratase beta chain 3 155 4.5E-54 T 12-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 M892_03665 137448cf9e26e4cb1ad89d0d24496977 453 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 9.2E-227 T 12-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 M892_03665 137448cf9e26e4cb1ad89d0d24496977 453 Pfam PF03313 Serine dehydratase alpha chain 184 448 1.3E-97 T 12-10-2018 IPR005130 Serine dehydratase-like, alpha subunit M892_03665 137448cf9e26e4cb1ad89d0d24496977 453 SUPERFAMILY SSF143548 16 157 5.75E-44 T 12-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 M892_03425 24cb387c810b1a1f57e521b5546f5e70 231 Pfam PF09669 Phage regulatory protein Rha (Phage_pRha) 12 90 1.2E-17 T 12-10-2018 IPR014054 Bacteriophage regulatory protein, Rha family M892_03425 24cb387c810b1a1f57e521b5546f5e70 231 Pfam PF03374 Phage antirepressor protein KilAC domain 119 221 8.2E-25 T 12-10-2018 IPR005039 Antirepressor protein, C-terminal GO:0003677 M892_03360 64b8a3dd803684ef0c668d2e9685ecfd 159 Gene3D G3DSA:1.10.530.40 1 157 3.4E-50 T 12-10-2018 M892_03360 64b8a3dd803684ef0c668d2e9685ecfd 159 SUPERFAMILY SSF53955 7 157 8.7E-54 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily M892_03360 64b8a3dd803684ef0c668d2e9685ecfd 159 Pfam PF00959 Phage lysozyme 43 149 1.9E-24 T 12-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 M892_27010 ffe4f14a2c4d1842b88524265cbdec1e 335 Gene3D G3DSA:1.10.260.40 1 64 6.0E-23 T 12-10-2018 M892_27010 ffe4f14a2c4d1842b88524265cbdec1e 335 SMART SM00354 7 77 1.6E-28 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M892_27010 ffe4f14a2c4d1842b88524265cbdec1e 335 Pfam PF13377 Periplasmic binding protein-like domain 174 333 5.7E-28 T 12-10-2018 M892_27010 ffe4f14a2c4d1842b88524265cbdec1e 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 11 54 1.2E-16 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M892_27010 ffe4f14a2c4d1842b88524265cbdec1e 335 Gene3D G3DSA:3.40.50.2300 158 334 4.4E-41 T 12-10-2018 M892_27010 ffe4f14a2c4d1842b88524265cbdec1e 335 SUPERFAMILY SSF53822 66 334 1.55E-52 T 12-10-2018 IPR028082 Periplasmic binding protein-like I M892_27010 ffe4f14a2c4d1842b88524265cbdec1e 335 Gene3D G3DSA:3.40.50.2300 65 155 1.4E-11 T 12-10-2018 M892_27010 ffe4f14a2c4d1842b88524265cbdec1e 335 SUPERFAMILY SSF47413 7 65 7.74E-18 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 M892_01285 dc05fd6060c0106078e5e22ef301df1d 238 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 9 225 3.8E-61 T 12-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 M892_01285 dc05fd6060c0106078e5e22ef301df1d 238 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 9 236 2.0E-53 T 12-10-2018 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 M892_01285 dc05fd6060c0106078e5e22ef301df1d 238 Gene3D G3DSA:3.40.50.1360 1 238 1.8E-87 T 12-10-2018 M892_01285 dc05fd6060c0106078e5e22ef301df1d 238 SUPERFAMILY SSF100950 3 237 4.19E-60 T 12-10-2018 IPR037171 NagB/RpiA transferase-like M892_13920 e08dcf6844096573e1c391d585650065 541 SUPERFAMILY SSF161098 7 258 1.83E-44 T 12-10-2018 IPR035906 MetI-like superfamily M892_13920 e08dcf6844096573e1c391d585650065 541 SUPERFAMILY SSF161098 282 535 2.83E-39 T 12-10-2018 IPR035906 MetI-like superfamily M892_13920 e08dcf6844096573e1c391d585650065 541 Gene3D G3DSA:1.10.3720.10 286 540 6.9E-33 T 12-10-2018 IPR035906 MetI-like superfamily M892_13920 e08dcf6844096573e1c391d585650065 541 Gene3D G3DSA:1.10.3720.10 10 267 6.3E-54 T 12-10-2018 IPR035906 MetI-like superfamily M892_13920 e08dcf6844096573e1c391d585650065 541 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 68 255 7.7E-15 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M892_13920 e08dcf6844096573e1c391d585650065 541 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 343 534 7.4E-7 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M892_22935 a4cb630e2298e284beaee7bfb1662a02 188 Pfam PF00665 Integrase core domain 52 163 4.0E-26 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 M892_22935 a4cb630e2298e284beaee7bfb1662a02 188 SUPERFAMILY SSF53098 50 175 5.56E-40 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_22935 a4cb630e2298e284beaee7bfb1662a02 188 Gene3D G3DSA:3.30.420.10 39 176 6.8E-18 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M892_18465 1bbdb2172ea778b8ddca60505fb8076b 419 Gene3D G3DSA:1.10.443.10 225 412 2.7E-25 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 M892_18465 1bbdb2172ea778b8ddca60505fb8076b 419 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 127 194 4.8E-5 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 M892_18465 1bbdb2172ea778b8ddca60505fb8076b 419 SUPERFAMILY SSF56349 117 405 5.0E-41 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 M892_18465 1bbdb2172ea778b8ddca60505fb8076b 419 Gene3D G3DSA:1.10.150.130 110 217 9.7E-16 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal M892_18465 1bbdb2172ea778b8ddca60505fb8076b 419 Pfam PF00589 Phage integrase family 247 399 2.5E-14 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 M892_00850 4c6a4cf5995ff116c17e4c3df48d44c2 210 Pfam PF10816 Domain of unknown function (DUF2760) 87 209 4.7E-54 T 12-10-2018 IPR021212 Domain of unknown function DUF2760 M892_27440 c796729bbe153fea10f99da5daa0b1fe 1164 SMART SM00634 800 889 1.9E-5 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain M892_27440 c796729bbe153fea10f99da5daa0b1fe 1164 SMART SM00634 998 1087 0.046 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain M892_27440 c796729bbe153fea10f99da5daa0b1fe 1164 SMART SM00634 600 691 0.23 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain M892_27440 c796729bbe153fea10f99da5daa0b1fe 1164 SMART SM00634 701 790 0.033 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain M892_27440 c796729bbe153fea10f99da5daa0b1fe 1164 SMART SM00634 899 988 9.3E-6 T 12-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain M892_27440 c796729bbe153fea10f99da5daa0b1fe 1164 SUPERFAMILY SSF49373 694 790 4.45E-15 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments M892_27440 c796729bbe153fea10f99da5daa0b1fe 1164 SUPERFAMILY SSF49373 892 990 1.12E-17 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments M892_27440 c796729bbe153fea10f99da5daa0b1fe 1164 SUPERFAMILY SSF49373 598 693 2.22E-11 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments M892_27440 c796729bbe153fea10f99da5daa0b1fe 1164 SUPERFAMILY SSF49373 1095 1148 1.65E-5 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments M892_27440 c796729bbe153fea10f99da5daa0b1fe 1164 Pfam PF09134 Invasin, domain 3 899 985 1.1E-12 T 12-10-2018 IPR015217 Invasin, domain 3 M892_27440 c796729bbe153fea10f99da5daa0b1fe 1164 Pfam PF09134 Invasin, domain 3 799 886 7.8E-10 T 12-10-2018 IPR015217 Invasin, domain 3 M892_27440 c796729bbe153fea10f99da5daa0b1fe 1164 Pfam PF09134 Invasin, domain 3 700 787 1.4E-9 T 12-10-2018 IPR015217 Invasin, domain 3 M892_27440 c796729bbe153fea10f99da5daa0b1fe 1164 Pfam PF09134 Invasin, domain 3 606 691 2.0E-9 T 12-10-2018 IPR015217 Invasin, domain 3 M892_27440 c796729bbe153fea10f99da5daa0b1fe 1164 Pfam PF09134 Invasin, domain 3 997 1084 7.7E-8 T 12-10-2018 IPR015217 Invasin, domain 3 M892_27440 c796729bbe153fea10f99da5daa0b1fe 1164 Gene3D G3DSA:2.60.40.10 597 696 9.5E-12 T 12-10-2018 IPR013783 Immunoglobulin-like fold M892_27440 c796729bbe153fea10f99da5daa0b1fe 1164 Gene3D G3DSA:2.60.40.10 994 1089 1.2E-10 T 12-10-2018 IPR013783 Immunoglobulin-like fold M892_27440 c796729bbe153fea10f99da5daa0b1fe 1164 Gene3D G3DSA:2.60.40.10 697 794 1.4E-14 T 12-10-2018 IPR013783 Immunoglobulin-like fold M892_27440 c796729bbe153fea10f99da5daa0b1fe 1164 Gene3D G3DSA:2.60.40.10 796 892 4.4E-16 T 12-10-2018 IPR013783 Immunoglobulin-like fold M892_27440 c796729bbe153fea10f99da5daa0b1fe 1164 Gene3D G3DSA:2.60.40.10 895 991 3.5E-15 T 12-10-2018 IPR013783 Immunoglobulin-like fold M892_27440 c796729bbe153fea10f99da5daa0b1fe 1164 SUPERFAMILY SSF49373 793 889 1.28E-16 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments M892_27440 c796729bbe153fea10f99da5daa0b1fe 1164 SUPERFAMILY SSF49373 991 1086 1.05E-12 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments M892_26280 39c3f91c007cc74ee26ee23d3b5399fc 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 2.4E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_26280 39c3f91c007cc74ee26ee23d3b5399fc 300 Gene3D G3DSA:1.10.10.10 5 88 4.0E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_26280 39c3f91c007cc74ee26ee23d3b5399fc 300 Pfam PF03466 LysR substrate binding domain 89 295 1.6E-24 T 12-10-2018 IPR005119 LysR, substrate-binding M892_26280 39c3f91c007cc74ee26ee23d3b5399fc 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.5E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_26280 39c3f91c007cc74ee26ee23d3b5399fc 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 2.5E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_26280 39c3f91c007cc74ee26ee23d3b5399fc 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 2.5E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_26280 39c3f91c007cc74ee26ee23d3b5399fc 300 SUPERFAMILY SSF53850 91 298 2.71E-27 T 12-10-2018 M892_26280 39c3f91c007cc74ee26ee23d3b5399fc 300 Gene3D G3DSA:3.40.190.10 102 291 3.7E-35 T 12-10-2018 M892_26280 39c3f91c007cc74ee26ee23d3b5399fc 300 Gene3D G3DSA:3.40.190.10 163 264 3.7E-35 T 12-10-2018 M892_26280 39c3f91c007cc74ee26ee23d3b5399fc 300 SUPERFAMILY SSF46785 3 84 6.89E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_14965 9c49692c60b31376e30c3f3a85de0c18 1143 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 1 1014 0.0 T 12-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M892_14965 9c49692c60b31376e30c3f3a85de0c18 1143 Gene3D G3DSA:1.10.10.1600 417 494 3.0E-32 T 12-10-2018 M892_14965 9c49692c60b31376e30c3f3a85de0c18 1143 Pfam PF01336 OB-fold nucleic acid binding domain 977 1055 5.5E-11 T 12-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 M892_14965 9c49692c60b31376e30c3f3a85de0c18 1143 Pfam PF02811 PHP domain 2 156 7.8E-37 T 12-10-2018 IPR004013 PHP domain GO:0003824 M892_14965 9c49692c60b31376e30c3f3a85de0c18 1143 SUPERFAMILY SSF89550 3 247 1.28E-8 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 M892_14965 9c49692c60b31376e30c3f3a85de0c18 1143 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 276 719 1.2E-173 T 12-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M892_14965 9c49692c60b31376e30c3f3a85de0c18 1143 Pfam PF14579 Helix-hairpin-helix motif 793 881 2.2E-25 T 12-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M892_14965 9c49692c60b31376e30c3f3a85de0c18 1143 SUPERFAMILY SSF50249 962 1048 9.2E-6 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M892_14965 9c49692c60b31376e30c3f3a85de0c18 1143 SMART SM00481 1 58 5.5E-10 T 12-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal M892_14965 9c49692c60b31376e30c3f3a85de0c18 1143 Gene3D G3DSA:3.20.20.140 1 254 1.0E-81 T 12-10-2018 M892_14965 9c49692c60b31376e30c3f3a85de0c18 1143 Gene3D G3DSA:2.40.50.140 968 1056 2.1E-9 T 12-10-2018 M892_27700 10725943ac01da89ab5882c233dfdd15 443 Pfam PF13006 Insertion element 4 transposase N-terminal 16 108 1.1E-24 T 12-10-2018 IPR024473 Transposase, IS4, N-terminal M892_27700 10725943ac01da89ab5882c233dfdd15 443 Pfam PF01609 Transposase DDE domain 126 357 1.0E-22 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_27700 10725943ac01da89ab5882c233dfdd15 443 SUPERFAMILY SSF53098 103 412 1.44E-18 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_16120 736eb2b836f0361538cdabe871ecd99e 186 SUPERFAMILY SSF56349 49 171 1.44E-8 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 M892_16120 736eb2b836f0361538cdabe871ecd99e 186 Gene3D G3DSA:1.10.443.10 55 180 3.7E-9 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 M892_16120 736eb2b836f0361538cdabe871ecd99e 186 Pfam PF00589 Phage integrase family 72 158 2.8E-7 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 M892_07960 992bc8de57de88162baa2fb75388ad85 308 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 13 303 9.9E-133 T 12-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 M892_07960 992bc8de57de88162baa2fb75388ad85 308 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 192 209 - T 12-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 M892_07960 992bc8de57de88162baa2fb75388ad85 308 Gene3D G3DSA:3.40.50.10490 8 225 1.7E-78 T 12-10-2018 M892_07960 992bc8de57de88162baa2fb75388ad85 308 Pfam PF13580 SIS domain 49 172 6.1E-9 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 M892_07960 992bc8de57de88162baa2fb75388ad85 308 Gene3D G3DSA:1.10.8.1080 226 304 5.2E-31 T 12-10-2018 M892_07960 992bc8de57de88162baa2fb75388ad85 308 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 9 302 43.651 T 12-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 M892_07960 992bc8de57de88162baa2fb75388ad85 308 SUPERFAMILY SSF53697 12 256 1.45E-72 T 12-10-2018 M892_14490 45f3c3a743d3e940401cb0f73360ba22 88 SUPERFAMILY SSF50249 4 80 2.28E-24 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M892_14490 45f3c3a743d3e940401cb0f73360ba22 88 Pfam PF01588 Putative tRNA binding domain 14 80 8.4E-22 T 12-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 M892_14490 45f3c3a743d3e940401cb0f73360ba22 88 Gene3D G3DSA:2.40.50.140 2 83 7.0E-29 T 12-10-2018 M892_05025 d04bb59c55374f052d4a89520ad0513e 149 ProDom PD090021 MEMBRANE YGAW TRANSMEMBRANE INNER VV2263 Y3636 VC1828 VP1070 15 142 3.0E-67 T 12-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 M892_05025 d04bb59c55374f052d4a89520ad0513e 149 Pfam PF06610 L-alanine exporter 8 142 1.1E-69 T 12-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 M892_05025 d04bb59c55374f052d4a89520ad0513e 149 Hamap MF_00914 L-alanine exporter AlaE [alaE]. 2 145 32.046 T 12-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 M892_07330 2f13eca56f85f58ff19e8db6c2f7849e 410 Gene3D G3DSA:3.30.160.390 7 95 7.9E-28 T 12-10-2018 IPR038488 Integrase, DNA-binding domain superfamily M892_07330 2f13eca56f85f58ff19e8db6c2f7849e 410 Pfam PF13356 Arm DNA-binding domain 8 93 5.2E-19 T 12-10-2018 IPR025166 Integrase, DNA-binding domain M892_07330 2f13eca56f85f58ff19e8db6c2f7849e 410 Pfam PF00589 Phage integrase family 213 376 5.9E-25 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 M892_07330 2f13eca56f85f58ff19e8db6c2f7849e 410 SUPERFAMILY SSF56349 106 387 9.42E-58 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 M892_07330 2f13eca56f85f58ff19e8db6c2f7849e 410 Gene3D G3DSA:1.10.443.10 211 387 1.7E-17 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 M892_07330 2f13eca56f85f58ff19e8db6c2f7849e 410 Gene3D G3DSA:1.10.150.130 96 210 1.3E-29 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal M892_08935 fdebda799a2a170d5bd32db55e865622 452 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 449 58.851 T 12-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 M892_08935 fdebda799a2a170d5bd32db55e865622 452 Pfam PF02875 Mur ligase family, glutamate ligase domain 311 388 6.2E-12 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 M892_08935 fdebda799a2a170d5bd32db55e865622 452 Pfam PF08245 Mur ligase middle domain 108 291 1.8E-20 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 M892_08935 fdebda799a2a170d5bd32db55e865622 452 Gene3D G3DSA:3.90.190.20 314 450 5.3E-31 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 M892_08935 fdebda799a2a170d5bd32db55e865622 452 SUPERFAMILY SSF53244 311 448 1.14E-36 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 M892_08935 fdebda799a2a170d5bd32db55e865622 452 Gene3D G3DSA:3.40.50.720 1 90 9.2E-36 T 12-10-2018 M892_08935 fdebda799a2a170d5bd32db55e865622 452 Pfam PF01225 Mur ligase family, catalytic domain 2 101 8.1E-19 T 12-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 M892_08935 fdebda799a2a170d5bd32db55e865622 452 SUPERFAMILY SSF53623 97 308 1.7E-52 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 M892_08935 fdebda799a2a170d5bd32db55e865622 452 SUPERFAMILY SSF51984 1 89 1.14E-22 T 12-10-2018 M892_08935 fdebda799a2a170d5bd32db55e865622 452 Gene3D G3DSA:3.40.1190.10 91 313 1.9E-56 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 M892_08935 fdebda799a2a170d5bd32db55e865622 452 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 449 1.1E-258 T 12-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 M892_15770 f911e454154a2d18701a4bb62465a8b2 322 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 3 298 2.4E-81 T 12-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain M892_15770 f911e454154a2d18701a4bb62465a8b2 322 Gene3D G3DSA:3.90.245.10 1 319 1.5E-103 T 12-10-2018 IPR036452 Ribonucleoside hydrolase-like M892_15770 f911e454154a2d18701a4bb62465a8b2 322 SUPERFAMILY SSF53590 1 289 1.7E-90 T 12-10-2018 IPR036452 Ribonucleoside hydrolase-like M892_07560 d1a2fbccba21fc4e3809d1b72cb82735 386 SMART SM00564 322 353 0.0018 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat M892_07560 d1a2fbccba21fc4e3809d1b72cb82735 386 SMART SM00564 106 138 0.0016 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat M892_07560 d1a2fbccba21fc4e3809d1b72cb82735 386 SMART SM00564 191 223 330.0 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat M892_07560 d1a2fbccba21fc4e3809d1b72cb82735 386 SMART SM00564 147 178 0.0092 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat M892_07560 d1a2fbccba21fc4e3809d1b72cb82735 386 SMART SM00564 63 94 3.3E-8 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat M892_07560 d1a2fbccba21fc4e3809d1b72cb82735 386 SMART SM00564 243 274 56.0 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat M892_07560 d1a2fbccba21fc4e3809d1b72cb82735 386 SMART SM00564 280 312 42.0 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat M892_07560 d1a2fbccba21fc4e3809d1b72cb82735 386 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 7 382 4.2E-143 T 12-10-2018 IPR017687 Outer membrane protein assembly factor BamB M892_07560 d1a2fbccba21fc4e3809d1b72cb82735 386 SUPERFAMILY SSF50998 31 376 2.13E-84 T 12-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily M892_07560 d1a2fbccba21fc4e3809d1b72cb82735 386 Pfam PF13360 PQQ-like domain 76 310 2.9E-52 T 12-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat M892_07560 d1a2fbccba21fc4e3809d1b72cb82735 386 Gene3D G3DSA:2.130.10.10 18 385 9.8E-101 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 M892_07560 d1a2fbccba21fc4e3809d1b72cb82735 386 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 3 384 40.993 T 12-10-2018 IPR017687 Outer membrane protein assembly factor BamB M892_09530 051730415ec71d09d5edf1d6c052f613 134 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 82 93 - T 12-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 M892_09530 051730415ec71d09d5edf1d6c052f613 134 Pfam PF01219 Prokaryotic diacylglycerol kinase 29 129 2.0E-33 T 12-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 M892_09530 051730415ec71d09d5edf1d6c052f613 134 Gene3D G3DSA:1.10.3830.10 15 133 1.2E-39 T 12-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 M892_09870 869aebc9d491e8b4c883883cfecd6d7c 314 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 21 279 2.4E-83 T 12-10-2018 IPR017039 Virulence factor BrkB M892_09870 869aebc9d491e8b4c883883cfecd6d7c 314 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 10 296 23.913 T 12-10-2018 IPR023679 Uncharacterised protein family UPF0761, bacterial M892_09870 869aebc9d491e8b4c883883cfecd6d7c 314 Pfam PF03631 Virulence factor BrkB 33 280 1.8E-59 T 12-10-2018 IPR017039 Virulence factor BrkB M892_09870 869aebc9d491e8b4c883883cfecd6d7c 314 PIRSF PIRSF035875 9 294 2.7E-55 T 12-10-2018 IPR017039 Virulence factor BrkB M892_04655 8011126a385b38a103d029f4060caa9f 623 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 379 398 6.4E-39 T 12-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 M892_04655 8011126a385b38a103d029f4060caa9f 623 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 413 428 6.4E-39 T 12-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 M892_04655 8011126a385b38a103d029f4060caa9f 623 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 200 217 6.4E-39 T 12-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 M892_04655 8011126a385b38a103d029f4060caa9f 623 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 505 524 6.4E-39 T 12-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 M892_04655 8011126a385b38a103d029f4060caa9f 623 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 295 315 6.4E-39 T 12-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 M892_04655 8011126a385b38a103d029f4060caa9f 623 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 472 505 - T 12-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 M892_04655 8011126a385b38a103d029f4060caa9f 623 Gene3D G3DSA:3.30.1370.120 112 180 1.6E-13 T 12-10-2018 IPR038591 NolW-like superfamily M892_04655 8011126a385b38a103d029f4060caa9f 623 Pfam PF03958 Bacterial type II/III secretion system short domain 188 292 1.8E-15 T 12-10-2018 IPR005644 NolW-like M892_04655 8011126a385b38a103d029f4060caa9f 623 Pfam PF00263 Bacterial type II and III secretion system protein 366 526 4.8E-37 T 12-10-2018 IPR004846 Type II/III secretion system GO:0009306 M892_04655 8011126a385b38a103d029f4060caa9f 623 Gene3D G3DSA:3.30.1370.120 187 292 2.1E-9 T 12-10-2018 IPR038591 NolW-like superfamily M892_04655 8011126a385b38a103d029f4060caa9f 623 Gene3D G3DSA:3.55.50.30 28 111 1.5E-29 T 12-10-2018 M892_04655 8011126a385b38a103d029f4060caa9f 623 TIGRFAM TIGR02516 type_III_yscC: type III secretion outer membrane pore, YscC/HrcC family 40 527 4.0E-152 T 12-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 M892_15375 dff045c1cb20c6f035a88be390ce1c3a 164 SMART SM00260 16 153 2.5E-50 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 M892_15375 dff045c1cb20c6f035a88be390ce1c3a 164 SUPERFAMILY SSF50341 15 158 9.29E-42 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 M892_15375 dff045c1cb20c6f035a88be390ce1c3a 164 Gene3D G3DSA:2.30.30.40 22 147 7.0E-43 T 12-10-2018 M892_15375 dff045c1cb20c6f035a88be390ce1c3a 164 Gene3D G3DSA:2.40.50.180 39 148 7.0E-43 T 12-10-2018 M892_15375 dff045c1cb20c6f035a88be390ce1c3a 164 Pfam PF01584 CheW-like domain 20 155 4.7E-40 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 M892_18145 129453ce4e352faed1923afc175e7679 81 Pfam PF07073 Modulator of Rho-dependent transcription termination (ROF) 1 80 1.3E-27 T 12-10-2018 IPR009778 Modulator of Rho-dependent transcription termination M892_18145 129453ce4e352faed1923afc175e7679 81 SUPERFAMILY SSF101744 1 80 7.85E-23 T 12-10-2018 IPR023534 Rof/RNase P-like Reactome: R-HSA-6784531 M892_18145 129453ce4e352faed1923afc175e7679 81 Gene3D G3DSA:2.30.30.400 2 79 7.9E-15 T 12-10-2018 IPR038626 Rof-like superfamily M892_09345 d3c8d50bcb11bf8f5a5c29b332a1a63f 541 Gene3D G3DSA:1.50.10.100 26 303 1.7E-50 T 12-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 M892_09345 d3c8d50bcb11bf8f5a5c29b332a1a63f 541 Pfam PF16889 Heparinase II/III N-terminus 109 285 1.4E-19 T 12-10-2018 IPR031680 Heparin-sulfate lyase, N-terminal MetaCyc: PWY-7651 M892_09345 d3c8d50bcb11bf8f5a5c29b332a1a63f 541 SUPERFAMILY SSF48230 102 288 1.28E-21 T 12-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 M892_09345 d3c8d50bcb11bf8f5a5c29b332a1a63f 541 Pfam PF07940 Heparinase II/III-like protein 310 531 9.1E-52 T 12-10-2018 IPR012480 Heparinase II/III-like GO:0016829 M892_09345 d3c8d50bcb11bf8f5a5c29b332a1a63f 541 Gene3D G3DSA:2.70.98.70 312 538 2.9E-22 T 12-10-2018 M892_17195 ddba1c36a5e516081ace563131583e21 92 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 35 43 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 M892_17195 ddba1c36a5e516081ace563131583e21 92 SUPERFAMILY SSF54292 8 81 1.44E-18 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 M892_17195 ddba1c36a5e516081ace563131583e21 92 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 8 74 2.7E-9 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 M892_17195 ddba1c36a5e516081ace563131583e21 92 Gene3D G3DSA:3.10.20.30 1 88 1.1E-16 T 12-10-2018 IPR012675 Beta-grasp domain superfamily M892_12985 395204d9c8e6c3ab3a1a3d1acd38d0c0 138 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 11 124 29.717 T 12-10-2018 IPR016716 Regulator of ribonuclease activity B M892_12985 395204d9c8e6c3ab3a1a3d1acd38d0c0 138 Gene3D G3DSA:3.30.70.970 1 131 6.3E-59 T 12-10-2018 IPR036701 RraB-like superfamily M892_12985 395204d9c8e6c3ab3a1a3d1acd38d0c0 138 PIRSF PIRSF018193 8 138 1.5E-58 T 12-10-2018 IPR016716 Regulator of ribonuclease activity B M892_12985 395204d9c8e6c3ab3a1a3d1acd38d0c0 138 SUPERFAMILY SSF89946 8 126 3.14E-39 T 12-10-2018 IPR036701 RraB-like superfamily M892_12985 395204d9c8e6c3ab3a1a3d1acd38d0c0 138 Pfam PF06877 Regulator of ribonuclease activity B 18 120 3.0E-34 T 12-10-2018 IPR009671 Regulator of ribonuclease activity B domain M892_18295 6696e65264033b96d874004c778a761a 478 SUPERFAMILY SSF46785 11 86 1.82E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_18295 6696e65264033b96d874004c778a761a 478 SMART SM00345 17 76 5.7E-19 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M892_18295 6696e65264033b96d874004c778a761a 478 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 76 5.9E-14 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M892_18295 6696e65264033b96d874004c778a761a 478 Gene3D G3DSA:3.40.640.10 145 361 1.4E-81 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M892_18295 6696e65264033b96d874004c778a761a 478 Gene3D G3DSA:3.90.1150.10 115 472 1.4E-81 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M892_18295 6696e65264033b96d874004c778a761a 478 Pfam PF00155 Aminotransferase class I and II 136 457 6.0E-26 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 M892_18295 6696e65264033b96d874004c778a761a 478 Gene3D G3DSA:1.10.10.10 10 77 4.5E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_18295 6696e65264033b96d874004c778a761a 478 SUPERFAMILY SSF53383 97 476 3.62E-78 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M892_25665 5609bde6cfbe2113c9ece564c5fac92d 494 Gene3D G3DSA:1.25.40.10 170 317 2.3E-11 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_25665 5609bde6cfbe2113c9ece564c5fac92d 494 SUPERFAMILY SSF48452 121 315 1.96E-14 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_25665 5609bde6cfbe2113c9ece564c5fac92d 494 Gene3D G3DSA:1.25.40.10 2 169 4.4E-9 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_25665 5609bde6cfbe2113c9ece564c5fac92d 494 SMART SM00028 287 320 440.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_25665 5609bde6cfbe2113c9ece564c5fac92d 494 SMART SM00028 207 240 12.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_25665 5609bde6cfbe2113c9ece564c5fac92d 494 SMART SM00028 127 160 29.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_19360 40dcdc5d851c28de823743ffde982d12 116 Pfam PF00581 Rhodanese-like domain 32 111 2.0E-15 T 12-10-2018 IPR001763 Rhodanese-like domain M892_19360 40dcdc5d851c28de823743ffde982d12 116 SUPERFAMILY SSF52821 12 108 4.45E-27 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily M892_19360 40dcdc5d851c28de823743ffde982d12 116 SMART SM00450 24 116 9.7E-18 T 12-10-2018 IPR001763 Rhodanese-like domain M892_19360 40dcdc5d851c28de823743ffde982d12 116 Gene3D G3DSA:3.40.250.10 24 116 1.9E-26 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily M892_00750 e52ed6629537747216e4a98d5335c273 236 TIGRFAM TIGR04041 activase_YjjW: glycine radical enzyme activase, YjjW family 1 231 2.5E-91 T 12-10-2018 IPR023912 Putative glycyl-radical enzyme activating enzyme YjjW M892_00750 e52ed6629537747216e4a98d5335c273 236 Gene3D G3DSA:3.80.30.10 61 225 7.9E-27 T 12-10-2018 M892_00750 e52ed6629537747216e4a98d5335c273 236 Pfam PF04055 Radical SAM superfamily 24 169 5.4E-12 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 M892_00750 e52ed6629537747216e4a98d5335c273 236 Gene3D G3DSA:3.30.70.20 1 42 5.0E-6 T 12-10-2018 M892_00750 e52ed6629537747216e4a98d5335c273 236 SUPERFAMILY SSF102114 24 171 3.18E-9 T 12-10-2018 M892_02070 e3b4b2771e26a8069fd01ce21021b931 626 SUPERFAMILY SSF52540 1 308 3.99E-21 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_02070 e3b4b2771e26a8069fd01ce21021b931 626 Gene3D G3DSA:3.40.50.300 1 345 1.4E-22 T 12-10-2018 M892_02070 e3b4b2771e26a8069fd01ce21021b931 626 Pfam PF13175 AAA ATPase domain 1 80 1.4E-17 T 12-10-2018 M892_02070 e3b4b2771e26a8069fd01ce21021b931 626 Pfam PF13175 AAA ATPase domain 132 306 7.1E-13 T 12-10-2018 M892_09650 0004d6fb27c19192b7270a8f850ee7a8 341 SUPERFAMILY SSF161098 107 321 2.75E-16 T 12-10-2018 IPR035906 MetI-like superfamily M892_09650 0004d6fb27c19192b7270a8f850ee7a8 341 Gene3D G3DSA:1.10.3720.10 102 332 7.3E-19 T 12-10-2018 IPR035906 MetI-like superfamily M892_09650 0004d6fb27c19192b7270a8f850ee7a8 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 132 338 9.6E-35 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M892_26050 f91dd13673b3f8593b79a9e72b3c87db 163 Pfam PF06891 P2 phage tail completion protein R (GpR) 9 142 1.9E-29 T 12-10-2018 IPR009678 Bacteriophage tail completion protein R M892_08705 dbeed90da6c14106117190f2aac2bf47 587 SUPERFAMILY SSF69593 45 198 2.09E-8 T 12-10-2018 M892_08705 dbeed90da6c14106117190f2aac2bf47 587 Gene3D G3DSA:3.40.630.30 312 456 1.2E-6 T 12-10-2018 M892_08705 dbeed90da6c14106117190f2aac2bf47 587 SMART SM00563 75 199 4.9E-4 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 M892_08705 dbeed90da6c14106117190f2aac2bf47 587 Pfam PF13444 Acetyltransferase (GNAT) domain 330 431 3.3E-21 T 12-10-2018 M892_08705 dbeed90da6c14106117190f2aac2bf47 587 SUPERFAMILY SSF55729 313 495 7.95E-22 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_26210 2a2e58b7f87d1c7f7bc936a65bc70d7c 457 SUPERFAMILY SSF55874 310 441 9.17E-15 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_26210 2a2e58b7f87d1c7f7bc936a65bc70d7c 457 Gene3D G3DSA:1.10.287.130 194 316 4.1E-12 T 12-10-2018 M892_26210 2a2e58b7f87d1c7f7bc936a65bc70d7c 457 Gene3D G3DSA:3.30.565.10 319 453 2.3E-12 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_26210 2a2e58b7f87d1c7f7bc936a65bc70d7c 457 SUPERFAMILY SSF47384 240 319 3.73E-10 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M892_26210 2a2e58b7f87d1c7f7bc936a65bc70d7c 457 Pfam PF00512 His Kinase A (phospho-acceptor) domain 261 319 3.9E-8 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M892_26210 2a2e58b7f87d1c7f7bc936a65bc70d7c 457 SMART SM00388 257 320 4.1E-8 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M892_23805 200acbd49c831dd85e086ba0ec361f60 380 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 26 55 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 M892_23805 200acbd49c831dd85e086ba0ec361f60 380 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 172 379 1.2E-55 T 12-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 M892_23805 200acbd49c831dd85e086ba0ec361f60 380 Pfam PF00364 Biotin-requiring enzyme 3 75 5.1E-16 T 12-10-2018 IPR000089 Biotin/lipoyl attachment M892_23805 200acbd49c831dd85e086ba0ec361f60 380 Pfam PF02817 e3 binding domain 128 160 7.5E-10 T 12-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 M892_23805 200acbd49c831dd85e086ba0ec361f60 380 SUPERFAMILY SSF51230 2 93 5.1E-24 T 12-10-2018 IPR011053 Single hybrid motif M892_23805 200acbd49c831dd85e086ba0ec361f60 380 SUPERFAMILY SSF52777 165 378 4.89E-56 T 12-10-2018 M892_23805 200acbd49c831dd85e086ba0ec361f60 380 Gene3D G3DSA:3.30.559.10 164 380 3.2E-50 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 M892_23805 200acbd49c831dd85e086ba0ec361f60 380 Gene3D G3DSA:4.10.320.10 116 163 9.1E-11 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 M892_23805 200acbd49c831dd85e086ba0ec361f60 380 Gene3D G3DSA:2.40.50.100 1 98 2.2E-21 T 12-10-2018 M892_23805 200acbd49c831dd85e086ba0ec361f60 380 SUPERFAMILY SSF47005 121 163 3.27E-9 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 M892_13475 93b8173891e3067728fa6d5514b61400 546 Gene3D G3DSA:3.40.50.880 286 543 4.0E-105 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M892_13475 93b8173891e3067728fa6d5514b61400 546 SUPERFAMILY SSF52317 289 538 9.48E-88 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M892_13475 93b8173891e3067728fa6d5514b61400 546 TIGRFAM TIGR00337 PyrG: CTP synthase 2 535 8.2E-261 T 12-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 M892_13475 93b8173891e3067728fa6d5514b61400 546 Pfam PF00117 Glutamine amidotransferase class-I 301 535 5.4E-63 T 12-10-2018 IPR017926 Glutamine amidotransferase M892_13475 93b8173891e3067728fa6d5514b61400 546 Pfam PF06418 CTP synthase N-terminus 5 265 9.5E-125 T 12-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 M892_13475 93b8173891e3067728fa6d5514b61400 546 Hamap MF_01227 CTP synthase [pyrG]. 3 540 51.257 T 12-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 M892_13475 93b8173891e3067728fa6d5514b61400 546 Gene3D G3DSA:3.40.50.300 1 285 1.7E-133 T 12-10-2018 M892_13475 93b8173891e3067728fa6d5514b61400 546 SUPERFAMILY SSF52540 3 269 1.92E-121 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_24640 108b1067617c2747e98c7323044fecaa 329 Gene3D G3DSA:3.30.360.10 135 325 6.9E-49 T 12-10-2018 M892_24640 108b1067617c2747e98c7323044fecaa 329 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 118 1.5E-25 T 12-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 M892_24640 108b1067617c2747e98c7323044fecaa 329 Gene3D G3DSA:3.40.50.720 1 134 3.6E-37 T 12-10-2018 M892_24640 108b1067617c2747e98c7323044fecaa 329 SUPERFAMILY SSF51735 2 134 1.25E-44 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_24640 108b1067617c2747e98c7323044fecaa 329 SUPERFAMILY SSF55347 148 289 1.08E-20 T 12-10-2018 M892_00425 e379d595c461c8f4fa2f068c56d18ab7 315 Pfam PF01381 Helix-turn-helix 6 63 1.9E-8 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 M892_00425 e379d595c461c8f4fa2f068c56d18ab7 315 SMART SM00530 5 68 4.6E-7 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 M892_00425 e379d595c461c8f4fa2f068c56d18ab7 315 Gene3D G3DSA:1.10.260.40 1 66 6.5E-12 T 12-10-2018 M892_00425 e379d595c461c8f4fa2f068c56d18ab7 315 SUPERFAMILY SSF47413 1 72 5.07E-10 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 M892_19920 cde31bd74897048c186409b360520afc 382 Gene3D G3DSA:3.40.640.10 60 273 9.3E-112 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M892_19920 cde31bd74897048c186409b360520afc 382 SUPERFAMILY SSF53383 3 380 3.06E-92 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M892_19920 cde31bd74897048c186409b360520afc 382 Gene3D G3DSA:3.90.1150.10 15 378 9.3E-112 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M892_19920 cde31bd74897048c186409b360520afc 382 Pfam PF00155 Aminotransferase class I and II 26 375 2.9E-34 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 M892_14880 89015c0a89d5aafc03eb2749a69e8e00 874 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 29 868 0.0 T 12-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 M892_14880 89015c0a89d5aafc03eb2749a69e8e00 874 Gene3D G3DSA:3.30.70.260 795 873 1.1E-5 T 12-10-2018 M892_14880 89015c0a89d5aafc03eb2749a69e8e00 874 Pfam PF01842 ACT domain 802 847 7.1E-8 T 12-10-2018 IPR002912 ACT domain M892_14880 89015c0a89d5aafc03eb2749a69e8e00 874 Gene3D G3DSA:1.10.3210.10 435 580 9.4E-9 T 12-10-2018 M892_14880 89015c0a89d5aafc03eb2749a69e8e00 874 Pfam PF01966 HD domain 452 584 1.5E-13 T 12-10-2018 IPR006674 HD domain M892_14880 89015c0a89d5aafc03eb2749a69e8e00 874 Pfam PF08335 GlnD PII-uridylyltransferase 176 314 4.1E-34 T 12-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 M892_14880 89015c0a89d5aafc03eb2749a69e8e00 874 SMART SM00471 447 594 5.0E-10 T 12-10-2018 IPR003607 HD/PDEase domain M892_14880 89015c0a89d5aafc03eb2749a69e8e00 874 SUPERFAMILY SSF81301 52 171 1.64E-20 T 12-10-2018 M892_14880 89015c0a89d5aafc03eb2749a69e8e00 874 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 874 339.158 T 12-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 M892_14880 89015c0a89d5aafc03eb2749a69e8e00 874 SUPERFAMILY SSF81593 186 310 1.57E-8 T 12-10-2018 M892_14880 89015c0a89d5aafc03eb2749a69e8e00 874 Pfam PF01909 Nucleotidyltransferase domain 57 108 1.3E-7 T 12-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 M892_14880 89015c0a89d5aafc03eb2749a69e8e00 874 SUPERFAMILY SSF109604 418 588 6.59E-14 T 12-10-2018 M892_14880 89015c0a89d5aafc03eb2749a69e8e00 874 SUPERFAMILY SSF55021 796 859 3.24E-10 T 12-10-2018 M892_14880 89015c0a89d5aafc03eb2749a69e8e00 874 PIRSF PIRSF006288 6 874 0.0 T 12-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 M892_14880 89015c0a89d5aafc03eb2749a69e8e00 874 SUPERFAMILY SSF55021 689 755 1.15E-8 T 12-10-2018 M892_24975 7dca25a6c90dee00336e9a4a09018fdc 97 SUPERFAMILY SSF46785 1 93 3.3E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_24975 7dca25a6c90dee00336e9a4a09018fdc 97 Pfam PF12840 Helix-turn-helix domain 8 69 2.8E-11 T 12-10-2018 M892_24975 7dca25a6c90dee00336e9a4a09018fdc 97 SMART SM00418 8 88 5.8E-6 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M892_24975 7dca25a6c90dee00336e9a4a09018fdc 97 Gene3D G3DSA:1.10.10.10 1 97 4.1E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_24975 7dca25a6c90dee00336e9a4a09018fdc 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 9.5E-7 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M892_24975 7dca25a6c90dee00336e9a4a09018fdc 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 60 9.5E-7 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M892_24975 7dca25a6c90dee00336e9a4a09018fdc 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 9.5E-7 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M892_10440 b1e46b2fbd0b3cbd334e19abf8d07f72 175 Pfam PF12724 Flavodoxin domain 5 153 1.1E-51 T 12-10-2018 IPR026816 Flavodoxin domain M892_10440 b1e46b2fbd0b3cbd334e19abf8d07f72 175 Gene3D G3DSA:3.40.50.360 5 121 4.5E-12 T 12-10-2018 IPR029039 Flavoprotein-like superfamily M892_10440 b1e46b2fbd0b3cbd334e19abf8d07f72 175 SUPERFAMILY SSF52218 3 158 1.54E-31 T 12-10-2018 IPR029039 Flavoprotein-like superfamily M892_12890 3dbec7962abea28d0bd65735d06b9e30 187 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 3 185 23.736 T 12-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 M892_12890 3dbec7962abea28d0bd65735d06b9e30 187 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 5 182 2.5E-48 T 12-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 M892_12890 3dbec7962abea28d0bd65735d06b9e30 187 Gene3D G3DSA:2.60.450.10 59 186 5.2E-38 T 12-10-2018 M892_12890 3dbec7962abea28d0bd65735d06b9e30 187 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 9 183 1.9E-45 T 12-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related M892_12890 3dbec7962abea28d0bd65735d06b9e30 187 PIRSF PIRSF028513 2 185 4.0E-30 T 12-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 M892_09090 7fc5641f69291cbf481ff2b64259efcd 126 SUPERFAMILY SSF64263 1 119 5.36E-51 T 12-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_09090 7fc5641f69291cbf481ff2b64259efcd 126 Pfam PF01196 Ribosomal protein L17 20 116 1.0E-34 T 12-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_09090 7fc5641f69291cbf481ff2b64259efcd 126 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 5.5E-49 T 12-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_09090 7fc5641f69291cbf481ff2b64259efcd 126 Gene3D G3DSA:3.90.1030.10 1 117 4.0E-48 T 12-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_09090 7fc5641f69291cbf481ff2b64259efcd 126 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.798 T 12-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_09090 7fc5641f69291cbf481ff2b64259efcd 126 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 12-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_06105 07c61715010951510902222462f5c46a 323 Pfam PF13406 Transglycosylase SLT domain 24 319 1.6E-110 T 12-10-2018 IPR031304 Transglycosylase SLT domain 2 M892_06105 07c61715010951510902222462f5c46a 323 SUPERFAMILY SSF53955 11 321 1.8E-100 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily M892_06105 07c61715010951510902222462f5c46a 323 Gene3D G3DSA:1.10.8.350 35 199 4.5E-93 T 12-10-2018 M892_06105 07c61715010951510902222462f5c46a 323 Gene3D G3DSA:1.10.530.10 66 318 4.5E-93 T 12-10-2018 M892_06105 07c61715010951510902222462f5c46a 323 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 24 322 8.2E-112 T 12-10-2018 IPR011970 Lytic murein transglycosylase M892_03970 bf1180e6d54b2aa47b6ef6e8e3ecf920 460 Gene3D G3DSA:1.20.120.640 306 460 1.8E-50 T 12-10-2018 M892_03970 bf1180e6d54b2aa47b6ef6e8e3ecf920 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 3.6E-29 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 M892_03970 bf1180e6d54b2aa47b6ef6e8e3ecf920 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 3.6E-29 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 M892_03970 bf1180e6d54b2aa47b6ef6e8e3ecf920 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 3.6E-29 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 M892_03970 bf1180e6d54b2aa47b6ef6e8e3ecf920 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 3.6E-29 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 M892_03970 bf1180e6d54b2aa47b6ef6e8e3ecf920 460 Gene3D G3DSA:3.40.50.620 1 305 4.0E-138 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M892_03970 bf1180e6d54b2aa47b6ef6e8e3ecf920 460 Pfam PF09190 DALR domain 341 402 5.0E-24 T 12-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 M892_03970 bf1180e6d54b2aa47b6ef6e8e3ecf920 460 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 3.5E-141 T 12-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 M892_03970 bf1180e6d54b2aa47b6ef6e8e3ecf920 460 SUPERFAMILY SSF52374 1 313 2.07E-103 T 12-10-2018 M892_03970 bf1180e6d54b2aa47b6ef6e8e3ecf920 460 SMART SM00840 341 402 1.7E-26 T 12-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 M892_03970 bf1180e6d54b2aa47b6ef6e8e3ecf920 460 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 460 39.124 T 12-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 M892_03970 bf1180e6d54b2aa47b6ef6e8e3ecf920 460 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 459 1.4E-190 T 12-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 M892_03970 bf1180e6d54b2aa47b6ef6e8e3ecf920 460 SUPERFAMILY SSF47323 316 459 1.31E-39 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 M892_12505 528f9c1c49b581a30292fe03e9f522d3 223 SUPERFAMILY SSF51366 4 218 2.41E-78 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 M892_12505 528f9c1c49b581a30292fe03e9f522d3 223 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 M892_12505 528f9c1c49b581a30292fe03e9f522d3 223 Gene3D G3DSA:3.20.20.70 5 221 5.6E-87 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M892_12505 528f9c1c49b581a30292fe03e9f522d3 223 PIRSF PIRSF001461 1 223 1.6E-107 T 12-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 M892_12505 528f9c1c49b581a30292fe03e9f522d3 223 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 1.7E-100 T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 M892_12505 528f9c1c49b581a30292fe03e9f522d3 223 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 M892_12505 528f9c1c49b581a30292fe03e9f522d3 223 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 1.7E-92 T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 M892_25505 acd4c9fc0e0ef4c88f9aade6d8aceb16 222 Gene3D G3DSA:1.10.10.10 154 215 2.0E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_25505 acd4c9fc0e0ef4c88f9aade6d8aceb16 222 SMART SM00421 154 211 2.3E-24 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_25505 acd4c9fc0e0ef4c88f9aade6d8aceb16 222 Pfam PF00196 Bacterial regulatory proteins, luxR family 156 211 1.4E-20 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_25505 acd4c9fc0e0ef4c88f9aade6d8aceb16 222 SUPERFAMILY SSF46894 146 213 1.53E-20 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M892_25505 acd4c9fc0e0ef4c88f9aade6d8aceb16 222 ProSitePatterns PS00622 LuxR-type HTH domain signature. 171 198 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_25505 acd4c9fc0e0ef4c88f9aade6d8aceb16 222 Gene3D G3DSA:3.40.50.2300 7 146 8.2E-37 T 12-10-2018 M892_25505 acd4c9fc0e0ef4c88f9aade6d8aceb16 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 187 2.4E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_25505 acd4c9fc0e0ef4c88f9aade6d8aceb16 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 187 199 2.4E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_25505 acd4c9fc0e0ef4c88f9aade6d8aceb16 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 171 2.4E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_21815 d5f87be06a1b3d75eee92592cedb39d6 323 Gene3D G3DSA:1.10.3470.10 2 322 9.6E-96 T 12-10-2018 IPR037294 ABC transporter, BtuC-like M892_21815 d5f87be06a1b3d75eee92592cedb39d6 323 SUPERFAMILY SSF81345 5 318 3.66E-81 T 12-10-2018 IPR037294 ABC transporter, BtuC-like M892_21815 d5f87be06a1b3d75eee92592cedb39d6 323 Pfam PF01032 FecCD transport family 12 318 1.1E-90 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 M892_27065 6a200b1ec32ab0c73d2d44a907498202 330 Gene3D G3DSA:3.30.1330.60 203 329 1.4E-10 T 12-10-2018 IPR036737 OmpA-like domain superfamily M892_27065 6a200b1ec32ab0c73d2d44a907498202 330 SUPERFAMILY SSF103088 216 302 1.1E-11 T 12-10-2018 IPR036737 OmpA-like domain superfamily M892_27065 6a200b1ec32ab0c73d2d44a907498202 330 Pfam PF00691 OmpA family 231 316 8.7E-8 T 12-10-2018 IPR006665 OmpA-like domain M892_27065 6a200b1ec32ab0c73d2d44a907498202 330 Gene3D G3DSA:2.40.160.20 39 192 1.4E-7 T 12-10-2018 M892_20475 5588c4f1b5e7fab204a315bf83c84cb9 113 Pfam PF01022 Bacterial regulatory protein, arsR family 35 84 6.8E-12 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M892_20475 5588c4f1b5e7fab204a315bf83c84cb9 113 Gene3D G3DSA:1.10.10.10 8 108 1.0E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_20475 5588c4f1b5e7fab204a315bf83c84cb9 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 30 45 8.4E-8 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M892_20475 5588c4f1b5e7fab204a315bf83c84cb9 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 66 81 8.4E-8 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M892_20475 5588c4f1b5e7fab204a315bf83c84cb9 113 SMART SM00418 28 106 8.5E-11 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M892_20475 5588c4f1b5e7fab204a315bf83c84cb9 113 SUPERFAMILY SSF46785 16 104 2.02E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_12010 724544c658a6f4ff9eebdacee0d58ae1 295 SUPERFAMILY SSF103481 36 140 3.01E-13 T 12-10-2018 M892_12010 724544c658a6f4ff9eebdacee0d58ae1 295 Pfam PF00892 EamA-like transporter family 156 293 5.9E-16 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M892_12010 724544c658a6f4ff9eebdacee0d58ae1 295 Pfam PF00892 EamA-like transporter family 5 135 1.7E-16 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M892_12010 724544c658a6f4ff9eebdacee0d58ae1 295 SUPERFAMILY SSF103481 218 293 4.45E-10 T 12-10-2018 M892_11030 1f1bc86dad0744e1dd83bbdaaa1e579f 108 PIRSF PIRSF000077 2 108 1.5E-42 T 12-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 M892_11030 1f1bc86dad0744e1dd83bbdaaa1e579f 108 Pfam PF00085 Thioredoxin 5 106 1.1E-32 T 12-10-2018 IPR013766 Thioredoxin domain GO:0045454 M892_11030 1f1bc86dad0744e1dd83bbdaaa1e579f 108 Gene3D G3DSA:3.40.30.10 1 108 5.6E-35 T 12-10-2018 M892_11030 1f1bc86dad0744e1dd83bbdaaa1e579f 108 PRINTS PR00421 Thioredoxin family signature 24 32 3.3E-10 T 12-10-2018 M892_11030 1f1bc86dad0744e1dd83bbdaaa1e579f 108 PRINTS PR00421 Thioredoxin family signature 72 83 3.3E-10 T 12-10-2018 M892_11030 1f1bc86dad0744e1dd83bbdaaa1e579f 108 PRINTS PR00421 Thioredoxin family signature 32 41 3.3E-10 T 12-10-2018 M892_11030 1f1bc86dad0744e1dd83bbdaaa1e579f 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 M892_11030 1f1bc86dad0744e1dd83bbdaaa1e579f 108 SUPERFAMILY SSF52833 3 107 3.72E-38 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M892_11030 1f1bc86dad0744e1dd83bbdaaa1e579f 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 3.5E-37 T 12-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 M892_04845 9b174d71932d3d13faafc5d8c8531dd5 510 Pfam PF03050 Transposase IS66 family 180 463 3.2E-101 T 12-10-2018 IPR004291 Transposase, IS66 M892_04845 9b174d71932d3d13faafc5d8c8531dd5 510 Pfam PF13817 IS66 C-terminal element 470 506 7.5E-8 T 12-10-2018 IPR039552 Transposase IS66, C-terminal M892_04845 9b174d71932d3d13faafc5d8c8531dd5 510 Pfam PF13007 Transposase C of IS166 homeodomain 38 108 2.2E-14 T 12-10-2018 IPR024463 Transposase TnpC, homeodomain M892_04845 9b174d71932d3d13faafc5d8c8531dd5 510 Pfam PF13005 zinc-finger binding domain of transposase IS66 116 160 1.6E-16 T 12-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 M892_20195 9b174d71932d3d13faafc5d8c8531dd5 510 Pfam PF03050 Transposase IS66 family 180 463 3.2E-101 T 12-10-2018 IPR004291 Transposase, IS66 M892_20195 9b174d71932d3d13faafc5d8c8531dd5 510 Pfam PF13817 IS66 C-terminal element 470 506 7.5E-8 T 12-10-2018 IPR039552 Transposase IS66, C-terminal M892_20195 9b174d71932d3d13faafc5d8c8531dd5 510 Pfam PF13007 Transposase C of IS166 homeodomain 38 108 2.2E-14 T 12-10-2018 IPR024463 Transposase TnpC, homeodomain M892_20195 9b174d71932d3d13faafc5d8c8531dd5 510 Pfam PF13005 zinc-finger binding domain of transposase IS66 116 160 1.6E-16 T 12-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 M892_21355 6bcb3edc349ef3cb005c4b21aa9334f4 283 Gene3D G3DSA:3.40.50.2300 89 275 6.5E-102 T 12-10-2018 M892_21355 6bcb3edc349ef3cb005c4b21aa9334f4 283 TIGRFAM TIGR02955 TMAO_TorT: TMAO reductase system periplasmic protein TorT 1 279 1.0E-115 T 12-10-2018 IPR014301 TMAO reductase system, periplasmic protein TorT M892_21355 6bcb3edc349ef3cb005c4b21aa9334f4 283 Gene3D G3DSA:3.40.50.2300 1 251 6.5E-102 T 12-10-2018 M892_21355 6bcb3edc349ef3cb005c4b21aa9334f4 283 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 3 251 1.9E-23 T 12-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain M892_21355 6bcb3edc349ef3cb005c4b21aa9334f4 283 SUPERFAMILY SSF53822 2 245 3.26E-33 T 12-10-2018 IPR028082 Periplasmic binding protein-like I M892_09995 266d7a8bba0842f4978b548859faf886 544 SUPERFAMILY SSF56112 94 436 1.82E-45 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily M892_09995 266d7a8bba0842f4978b548859faf886 544 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 3 539 56.407 T 12-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 M892_09995 266d7a8bba0842f4978b548859faf886 544 Pfam PF03109 ABC1 family 113 230 1.3E-35 T 12-10-2018 IPR004147 UbiB domain M892_09995 266d7a8bba0842f4978b548859faf886 544 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 6 445 1.1E-174 T 12-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 M892_23420 6aac0efbe2a89e0dd3945c424e62ee8d 290 SUPERFAMILY SSF81301 1 157 2.48E-34 T 12-10-2018 M892_23420 6aac0efbe2a89e0dd3945c424e62ee8d 290 Gene3D G3DSA:3.30.460.40 1 156 5.3E-26 T 12-10-2018 M892_23420 6aac0efbe2a89e0dd3945c424e62ee8d 290 Gene3D G3DSA:1.10.287.1080 165 286 6.3E-13 T 12-10-2018 M892_23420 6aac0efbe2a89e0dd3945c424e62ee8d 290 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 192 258 1.3E-15 T 12-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core M892_23420 6aac0efbe2a89e0dd3945c424e62ee8d 290 SUPERFAMILY SSF101386 169 267 1.05E-12 T 12-10-2018 M892_26730 332947f356298260d15d4892fa5252ac 234 SUPERFAMILY SSF46785 3 73 9.54E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_26730 332947f356298260d15d4892fa5252ac 234 Gene3D G3DSA:3.40.1410.10 70 229 2.3E-35 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily M892_26730 332947f356298260d15d4892fa5252ac 234 Pfam PF07702 UTRA domain 86 224 2.5E-35 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 M892_26730 332947f356298260d15d4892fa5252ac 234 SMART SM00866 86 225 4.0E-31 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 M892_26730 332947f356298260d15d4892fa5252ac 234 TIGRFAM TIGR03337 phnR: phosphonate utilization transcriptional regulator PhnR 2 229 1.0E-116 T 12-10-2018 IPR017722 Phosphonate utilization transcriptional regulator PhnR M892_26730 332947f356298260d15d4892fa5252ac 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 65 4.7E-18 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M892_26730 332947f356298260d15d4892fa5252ac 234 SMART SM00345 6 65 4.1E-16 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M892_26730 332947f356298260d15d4892fa5252ac 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 25 39 3.0E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M892_26730 332947f356298260d15d4892fa5252ac 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 55 3.0E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M892_26730 332947f356298260d15d4892fa5252ac 234 Gene3D G3DSA:1.10.10.10 2 69 5.6E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_26730 332947f356298260d15d4892fa5252ac 234 SUPERFAMILY SSF64288 53 228 9.74E-41 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily M892_13230 df1b94ec88b3fa89f736c6af61a527d6 236 Pfam PF01168 Alanine racemase, N-terminal domain 9 230 3.0E-34 T 12-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 M892_13230 df1b94ec88b3fa89f736c6af61a527d6 236 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 6 229 34.985 T 12-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 M892_13230 df1b94ec88b3fa89f736c6af61a527d6 236 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 230 2.6E-89 T 12-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 M892_13230 df1b94ec88b3fa89f736c6af61a527d6 236 SUPERFAMILY SSF51419 1 228 4.58E-82 T 12-10-2018 IPR029066 PLP-binding barrel M892_13230 df1b94ec88b3fa89f736c6af61a527d6 236 Gene3D G3DSA:3.20.20.10 1 236 1.0E-87 T 12-10-2018 IPR029066 PLP-binding barrel M892_13230 df1b94ec88b3fa89f736c6af61a527d6 236 PIRSF PIRSF004848 1 236 7.9E-78 T 12-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 M892_13230 df1b94ec88b3fa89f736c6af61a527d6 236 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 80 94 - T 12-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 M892_02805 03929a1d299124585422104856cd5f7d 264 PRINTS PR01398 Isochorismatase signature 39 56 5.6E-38 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 M892_02805 03929a1d299124585422104856cd5f7d 264 PRINTS PR01398 Isochorismatase signature 56 75 5.6E-38 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 M892_02805 03929a1d299124585422104856cd5f7d 264 PRINTS PR01398 Isochorismatase signature 85 107 5.6E-38 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 M892_02805 03929a1d299124585422104856cd5f7d 264 PRINTS PR01398 Isochorismatase signature 159 176 5.6E-38 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 M892_02805 03929a1d299124585422104856cd5f7d 264 PRINTS PR01398 Isochorismatase signature 141 159 5.6E-38 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 M892_02805 03929a1d299124585422104856cd5f7d 264 SUPERFAMILY SSF47336 193 258 3.06E-7 T 12-10-2018 IPR036736 ACP-like superfamily M892_02805 03929a1d299124585422104856cd5f7d 264 SUPERFAMILY SSF52499 9 222 2.49E-50 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 M892_02805 03929a1d299124585422104856cd5f7d 264 Gene3D G3DSA:1.10.1200.10 185 263 6.5E-19 T 12-10-2018 IPR036736 ACP-like superfamily M892_02805 03929a1d299124585422104856cd5f7d 264 Pfam PF00857 Isochorismatase family 9 168 2.9E-34 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 M892_02805 03929a1d299124585422104856cd5f7d 264 Gene3D G3DSA:3.40.50.850 4 184 9.4E-65 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 M892_02805 03929a1d299124585422104856cd5f7d 264 PIRSF PIRSF001111 5 264 5.9E-107 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 M892_02805 03929a1d299124585422104856cd5f7d 264 Pfam PF00550 Phosphopantetheine attachment site 198 256 1.2E-6 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain M892_14545 867be1e4ddb260a6b8de0282e7c4ce8f 356 SUPERFAMILY SSF51695 23 349 2.54E-90 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 M892_14545 867be1e4ddb260a6b8de0282e7c4ce8f 356 Gene3D G3DSA:3.20.20.190 21 350 6.0E-124 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 M892_14545 867be1e4ddb260a6b8de0282e7c4ce8f 356 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 28 344 5.5E-64 T 12-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 M892_05570 cdfb3b7bbcfaaa4b8f54195529f49ba7 151 SUPERFAMILY SSF55729 4 145 9.97E-27 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_05570 cdfb3b7bbcfaaa4b8f54195529f49ba7 151 Gene3D G3DSA:3.40.630.30 1 151 2.8E-37 T 12-10-2018 M892_05570 cdfb3b7bbcfaaa4b8f54195529f49ba7 151 Pfam PF00583 Acetyltransferase (GNAT) family 34 140 1.2E-18 T 12-10-2018 IPR000182 GNAT domain M892_04120 e2731fd670faecc77b577e3ec6977950 227 PIRSF PIRSF006755 1 224 4.6E-77 T 12-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 M892_04120 e2731fd670faecc77b577e3ec6977950 227 SUPERFAMILY SSF52540 1 212 1.1E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_04120 e2731fd670faecc77b577e3ec6977950 227 Gene3D G3DSA:3.40.50.300 3 224 2.9E-68 T 12-10-2018 M892_04120 e2731fd670faecc77b577e3ec6977950 227 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 212 29.758 T 12-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 M892_04120 e2731fd670faecc77b577e3ec6977950 227 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 176 3.1E-54 T 12-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 M892_04120 e2731fd670faecc77b577e3ec6977950 227 Pfam PF13500 AAA domain 4 211 8.2E-38 T 12-10-2018 M892_03435 388c05b195ac4a6f789189f93b14b5f5 318 Pfam PF13730 Helix-turn-helix domain 17 67 2.9E-15 T 12-10-2018 M892_03435 388c05b195ac4a6f789189f93b14b5f5 318 SUPERFAMILY SSF46785 21 69 4.63E-5 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_03435 388c05b195ac4a6f789189f93b14b5f5 318 Gene3D G3DSA:1.10.10.10 14 109 3.7E-12 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_23920 c5bc403f4d0fe1cc123a415611c345d8 514 Pfam PF13005 zinc-finger binding domain of transposase IS66 120 164 1.6E-16 T 12-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 M892_23920 c5bc403f4d0fe1cc123a415611c345d8 514 Pfam PF13007 Transposase C of IS166 homeodomain 42 112 2.2E-14 T 12-10-2018 IPR024463 Transposase TnpC, homeodomain M892_23920 c5bc403f4d0fe1cc123a415611c345d8 514 Pfam PF13817 IS66 C-terminal element 474 510 7.6E-8 T 12-10-2018 IPR039552 Transposase IS66, C-terminal M892_23920 c5bc403f4d0fe1cc123a415611c345d8 514 Pfam PF03050 Transposase IS66 family 184 467 1.3E-99 T 12-10-2018 IPR004291 Transposase, IS66 M892_23150 9dc8e576cfc296c734119c78c0b01abd 365 SUPERFAMILY SSF53901 7 325 6.17E-65 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M892_23150 9dc8e576cfc296c734119c78c0b01abd 365 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 5 324 6.8E-111 T 12-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 M892_23150 9dc8e576cfc296c734119c78c0b01abd 365 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 107 184 1.7E-28 T 12-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 M892_23150 9dc8e576cfc296c734119c78c0b01abd 365 Gene3D G3DSA:3.40.47.10 1 361 1.4E-153 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M892_23150 9dc8e576cfc296c734119c78c0b01abd 365 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 235 324 1.9E-37 T 12-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 M892_23150 9dc8e576cfc296c734119c78c0b01abd 365 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 4 324 66.125 T 12-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 M892_14755 202eb1f0f813fbc95c31ea86ec72c54a 77 Pfam PF04400 (Na+)-NQR maturation NqrM 22 62 3.9E-21 T 12-10-2018 IPR007495 (Na+)-NQR maturation factor NqrM M892_19090 7d7606f301a40881f9c2f88313a296a4 198 Gene3D G3DSA:1.10.10.60 1 56 3.2E-20 T 12-10-2018 M892_19090 7d7606f301a40881f9c2f88313a296a4 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 56 2.2E-15 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M892_19090 7d7606f301a40881f9c2f88313a296a4 198 SUPERFAMILY SSF48498 79 189 1.58E-7 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily M892_19090 7d7606f301a40881f9c2f88313a296a4 198 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 148 196 1.7E-7 T 12-10-2018 IPR039536 Transcriptional regulator TetR, C-terminal, Proteobacteria type M892_19090 7d7606f301a40881f9c2f88313a296a4 198 Gene3D G3DSA:1.10.357.10 58 198 6.7E-28 T 12-10-2018 M892_19090 7d7606f301a40881f9c2f88313a296a4 198 SUPERFAMILY SSF46689 4 80 1.29E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_19090 7d7606f301a40881f9c2f88313a296a4 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 2.7E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M892_19090 7d7606f301a40881f9c2f88313a296a4 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 2.7E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M892_13495 073d9343d98930c6ca22a3a19e3b2a04 158 SUPERFAMILY SSF69765 1 157 7.72E-66 T 12-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 M892_13495 073d9343d98930c6ca22a3a19e3b2a04 158 Pfam PF02542 YgbB family 2 155 8.6E-66 T 12-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 M892_13495 073d9343d98930c6ca22a3a19e3b2a04 158 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 3 157 3.8E-69 T 12-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 M892_13495 073d9343d98930c6ca22a3a19e3b2a04 158 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 36 51 - T 12-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 M892_13495 073d9343d98930c6ca22a3a19e3b2a04 158 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 2 157 36.091 T 12-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 M892_13495 073d9343d98930c6ca22a3a19e3b2a04 158 Gene3D G3DSA:3.30.1330.50 1 158 7.6E-70 T 12-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 M892_21920 8229cf10e93f7b92150830247aa7af84 163 Pfam PF01609 Transposase DDE domain 16 149 1.2E-9 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_18725 335e47a15fd81f1fb9e32d087f6b9b5c 134 Gene3D G3DSA:3.30.420.270 61 129 2.7E-11 T 12-10-2018 M892_18725 335e47a15fd81f1fb9e32d087f6b9b5c 134 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 132 2.7E-28 T 12-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 M892_09425 d69896d22ffed70b19a9055badb3a155 215 Gene3D G3DSA:2.40.360.10 16 214 7.4E-61 T 12-10-2018 IPR023373 YmcC-like superfamily M892_09425 d69896d22ffed70b19a9055badb3a155 215 Pfam PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF 15 209 4.1E-58 T 12-10-2018 IPR021308 Group 4 capsule polysaccharide formation lipoprotein GfcB M892_09425 d69896d22ffed70b19a9055badb3a155 215 SUPERFAMILY SSF159270 18 213 2.22E-60 T 12-10-2018 IPR023373 YmcC-like superfamily M892_25300 600e1f5fc48a5bd7c7d123de24103fd0 343 Gene3D G3DSA:3.40.50.2000 170 317 1.9E-18 T 12-10-2018 M892_25300 600e1f5fc48a5bd7c7d123de24103fd0 343 Pfam PF13579 Glycosyl transferase 4-like domain 63 159 1.4E-12 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 M892_25300 600e1f5fc48a5bd7c7d123de24103fd0 343 SUPERFAMILY SSF53756 1 335 1.67E-37 T 12-10-2018 M892_25300 600e1f5fc48a5bd7c7d123de24103fd0 343 Pfam PF13692 Glycosyl transferases group 1 182 311 3.7E-16 T 12-10-2018 M892_25300 600e1f5fc48a5bd7c7d123de24103fd0 343 Gene3D G3DSA:3.40.50.2000 2 169 4.4E-10 T 12-10-2018 M892_02775 3ca978969a0ecf6ea3e1c44135763eed 1042 Gene3D G3DSA:3.30.559.10 10 177 2.0E-12 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 M892_02775 3ca978969a0ecf6ea3e1c44135763eed 1042 ProSitePatterns PS00455 Putative AMP-binding domain signature. 596 607 - T 12-10-2018 IPR020845 AMP-binding, conserved site M892_02775 3ca978969a0ecf6ea3e1c44135763eed 1042 Gene3D G3DSA:3.30.559.30 194 425 9.6E-27 T 12-10-2018 M892_02775 3ca978969a0ecf6ea3e1c44135763eed 1042 Gene3D G3DSA:3.40.50.12780 448 846 3.0E-108 T 12-10-2018 M892_02775 3ca978969a0ecf6ea3e1c44135763eed 1042 Pfam PF00668 Condensation domain 14 416 1.8E-7 T 12-10-2018 IPR001242 Condensation domain M892_02775 3ca978969a0ecf6ea3e1c44135763eed 1042 SUPERFAMILY SSF47336 964 1028 1.4E-10 T 12-10-2018 IPR036736 ACP-like superfamily M892_02775 3ca978969a0ecf6ea3e1c44135763eed 1042 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 479 877 5.1E-115 T 12-10-2018 IPR010071 Amino acid adenylation domain M892_02775 3ca978969a0ecf6ea3e1c44135763eed 1042 Pfam PF00501 AMP-binding enzyme 457 852 2.6E-94 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 M892_02775 3ca978969a0ecf6ea3e1c44135763eed 1042 Gene3D G3DSA:3.30.300.30 847 956 1.5E-32 T 12-10-2018 M892_02775 3ca978969a0ecf6ea3e1c44135763eed 1042 Pfam PF00550 Phosphopantetheine attachment site 969 1028 5.6E-5 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain M892_02775 3ca978969a0ecf6ea3e1c44135763eed 1042 Gene3D G3DSA:1.10.1200.10 963 1030 8.3E-13 T 12-10-2018 IPR036736 ACP-like superfamily M892_02775 3ca978969a0ecf6ea3e1c44135763eed 1042 Pfam PF13193 AMP-binding enzyme C-terminal domain 861 938 9.7E-13 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain M892_02775 3ca978969a0ecf6ea3e1c44135763eed 1042 SUPERFAMILY SSF52777 10 165 2.96E-9 T 12-10-2018 M892_02775 3ca978969a0ecf6ea3e1c44135763eed 1042 SUPERFAMILY SSF56801 433 979 7.72E-139 T 12-10-2018 M892_02775 3ca978969a0ecf6ea3e1c44135763eed 1042 SUPERFAMILY SSF52777 198 420 4.0E-16 T 12-10-2018 M892_15415 ccd645188efa1f165e2ae2e1b19996d7 184 ProSitePatterns PS00194 Thioredoxin family active site. 71 89 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 M892_15415 ccd645188efa1f165e2ae2e1b19996d7 184 Pfam PF08534 Redoxin 41 164 1.2E-25 T 12-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 M892_15415 ccd645188efa1f165e2ae2e1b19996d7 184 SUPERFAMILY SSF52833 46 177 8.25E-38 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M892_15415 ccd645188efa1f165e2ae2e1b19996d7 184 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 6 177 9.0E-70 T 12-10-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 M892_15415 ccd645188efa1f165e2ae2e1b19996d7 184 Gene3D G3DSA:3.40.30.10 20 184 2.5E-44 T 12-10-2018 M892_05525 0bf524a2ab09f663c7b3c05c79c5779d 674 Gene3D G3DSA:1.10.287.950 345 674 4.3E-71 T 12-10-2018 M892_05525 0bf524a2ab09f663c7b3c05c79c5779d 674 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 539 568 1.1E-5 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M892_05525 0bf524a2ab09f663c7b3c05c79c5779d 674 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 426 455 1.1E-5 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M892_05525 0bf524a2ab09f663c7b3c05c79c5779d 674 SUPERFAMILY SSF58104 365 674 3.14E-73 T 12-10-2018 M892_05525 0bf524a2ab09f663c7b3c05c79c5779d 674 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 481 640 2.7E-43 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M892_05525 0bf524a2ab09f663c7b3c05c79c5779d 674 SMART SM00304 345 397 4.8E-5 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M892_05525 0bf524a2ab09f663c7b3c05c79c5779d 674 SMART SM00283 412 673 1.7E-74 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M892_02260 a3c38ff5efc06132938490677d79a54b 225 Pfam PF02397 Bacterial sugar transferase 27 220 1.6E-62 T 12-10-2018 IPR003362 Bacterial sugar transferase M892_28300 99898195f532d84dd4341d88e243f23c 245 SUPERFAMILY SSF52540 9 195 1.98E-6 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_28300 99898195f532d84dd4341d88e243f23c 245 Gene3D G3DSA:3.40.50.300 28 210 1.2E-5 T 12-10-2018 M892_14110 9a0050e596fcb9ebec4fec0c03c34053 894 SUPERFAMILY SSF50447 567 648 3.95E-23 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily M892_14110 9a0050e596fcb9ebec4fec0c03c34053 894 SUPERFAMILY SSF52540 392 558 4.3E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_14110 9a0050e596fcb9ebec4fec0c03c34053 894 Pfam PF11987 Translation-initiation factor 2 678 783 1.7E-36 T 12-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 M892_14110 9a0050e596fcb9ebec4fec0c03c34053 894 SUPERFAMILY SSF52156 671 800 4.58E-38 T 12-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily M892_14110 9a0050e596fcb9ebec4fec0c03c34053 894 Gene3D G3DSA:3.40.50.300 390 564 5.9E-70 T 12-10-2018 M892_14110 9a0050e596fcb9ebec4fec0c03c34053 894 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 319 368 5.7E-14 T 12-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal M892_14110 9a0050e596fcb9ebec4fec0c03c34053 894 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 51 1.3E-7 T 12-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal M892_14110 9a0050e596fcb9ebec4fec0c03c34053 894 Gene3D G3DSA:3.40.50.10050 688 794 5.0E-37 T 12-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily M892_14110 9a0050e596fcb9ebec4fec0c03c34053 894 Gene3D G3DSA:2.40.30.10 795 892 1.5E-34 T 12-10-2018 M892_14110 9a0050e596fcb9ebec4fec0c03c34053 894 SUPERFAMILY SSF46955 3 50 2.93E-12 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily M892_14110 9a0050e596fcb9ebec4fec0c03c34053 894 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 62 100 7.9E-16 T 12-10-2018 IPR013575 Initiation factor 2 associated domain, bacterial M892_14110 9a0050e596fcb9ebec4fec0c03c34053 894 Pfam PF00009 Elongation factor Tu GTP binding domain 397 553 4.6E-32 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M892_14110 9a0050e596fcb9ebec4fec0c03c34053 894 Gene3D G3DSA:3.30.56.50 2 50 2.5E-23 T 12-10-2018 M892_14110 9a0050e596fcb9ebec4fec0c03c34053 894 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 311 893 3.8E-285 T 12-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 M892_14110 9a0050e596fcb9ebec4fec0c03c34053 894 ProSitePatterns PS01176 Initiation factor 2 signature. 844 866 - T 12-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 M892_14110 9a0050e596fcb9ebec4fec0c03c34053 894 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 891 17.59 T 12-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 M892_14110 9a0050e596fcb9ebec4fec0c03c34053 894 SUPERFAMILY SSF50447 795 891 1.24E-34 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily M892_14110 9a0050e596fcb9ebec4fec0c03c34053 894 Gene3D G3DSA:2.40.30.10 565 683 2.1E-40 T 12-10-2018 M892_14110 9a0050e596fcb9ebec4fec0c03c34053 894 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 397 551 2.5E-34 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 M892_15125 0b0d704a68a7f396fb1b0c823b8d10fd 180 Gene3D G3DSA:3.30.70.260 87 180 1.1E-40 T 12-10-2018 M892_15125 0b0d704a68a7f396fb1b0c823b8d10fd 180 Gene3D G3DSA:3.30.70.260 1 85 6.8E-25 T 12-10-2018 M892_15125 0b0d704a68a7f396fb1b0c823b8d10fd 180 PIRSF PIRSF028103 1 178 1.1E-67 T 12-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 M892_15125 0b0d704a68a7f396fb1b0c823b8d10fd 180 Pfam PF13740 ACT domain 3 78 4.7E-23 T 12-10-2018 M892_15125 0b0d704a68a7f396fb1b0c823b8d10fd 180 SUPERFAMILY SSF55021 90 176 9.92E-21 T 12-10-2018 M892_15125 0b0d704a68a7f396fb1b0c823b8d10fd 180 SUPERFAMILY SSF55021 1 82 6.49E-18 T 12-10-2018 M892_24275 4d6166d4a3af33b2ebb1556527439534 589 Gene3D G3DSA:2.130.10.10 51 303 1.6E-8 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 M892_24275 4d6166d4a3af33b2ebb1556527439534 589 SUPERFAMILY SSF75011 71 517 6.28E-16 T 12-10-2018 M892_17115 58e6f8ebf0744bc01d1fac711b2c7538 312 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 106 120 - T 12-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 M892_17115 58e6f8ebf0744bc01d1fac711b2c7538 312 Gene3D G3DSA:3.10.290.10 1 59 4.5E-20 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 M892_17115 58e6f8ebf0744bc01d1fac711b2c7538 312 Gene3D G3DSA:3.30.70.580 70 228 7.5E-49 T 12-10-2018 M892_17115 58e6f8ebf0744bc01d1fac711b2c7538 312 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 72 232 5.4E-55 T 12-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 M892_17115 58e6f8ebf0744bc01d1fac711b2c7538 312 Pfam PF00849 RNA pseudouridylate synthase 68 185 6.3E-17 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 M892_17115 58e6f8ebf0744bc01d1fac711b2c7538 312 Pfam PF01479 S4 domain 4 43 4.2E-11 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_17115 58e6f8ebf0744bc01d1fac711b2c7538 312 SUPERFAMILY SSF55120 68 237 2.67E-42 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 M892_17115 58e6f8ebf0744bc01d1fac711b2c7538 312 SMART SM00363 3 61 8.0E-10 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_17115 58e6f8ebf0744bc01d1fac711b2c7538 312 Gene3D G3DSA:3.30.70.1560 130 220 7.5E-49 T 12-10-2018 M892_17115 58e6f8ebf0744bc01d1fac711b2c7538 312 SUPERFAMILY SSF55174 4 96 8.07E-12 T 12-10-2018 M892_09335 bb12bd61a7ea19da7914ed98a497dc76 434 Gene3D G3DSA:2.60.120.10 321 428 6.9E-19 T 12-10-2018 IPR014710 RmlC-like jelly roll fold M892_09335 bb12bd61a7ea19da7914ed98a497dc76 434 Pfam PF00483 Nucleotidyl transferase 1 249 7.1E-54 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 M892_09335 bb12bd61a7ea19da7914ed98a497dc76 434 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 1 428 1.9E-206 T 12-10-2018 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 M892_09335 bb12bd61a7ea19da7914ed98a497dc76 434 SUPERFAMILY SSF51182 149 426 1.69E-81 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily M892_09335 bb12bd61a7ea19da7914ed98a497dc76 434 Gene3D G3DSA:3.90.550.10 1 315 7.1E-101 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M892_09335 bb12bd61a7ea19da7914ed98a497dc76 434 SUPERFAMILY SSF53448 1 246 1.53E-27 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M892_09335 bb12bd61a7ea19da7914ed98a497dc76 434 Pfam PF01050 Mannose-6-phosphate isomerase 279 426 6.2E-65 T 12-10-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 M892_15215 96fa1fd76465ee1f81ac800f8e014119 670 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 434 658 4.4E-55 T 12-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 M892_15215 96fa1fd76465ee1f81ac800f8e014119 670 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 11 107 1.2E-19 T 12-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 M892_15215 96fa1fd76465ee1f81ac800f8e014119 670 Pfam PF07196 Flagellin hook IN motif 125 177 6.4E-8 T 12-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 M892_04900 8d954910c5f00f539495bf286ab9262b 514 Pfam PF03050 Transposase IS66 family 184 467 7.0E-101 T 12-10-2018 IPR004291 Transposase, IS66 M892_04900 8d954910c5f00f539495bf286ab9262b 514 Pfam PF13007 Transposase C of IS166 homeodomain 42 112 2.2E-14 T 12-10-2018 IPR024463 Transposase TnpC, homeodomain M892_04900 8d954910c5f00f539495bf286ab9262b 514 Pfam PF13005 zinc-finger binding domain of transposase IS66 120 164 1.6E-16 T 12-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 M892_04900 8d954910c5f00f539495bf286ab9262b 514 Pfam PF13817 IS66 C-terminal element 474 510 7.6E-8 T 12-10-2018 IPR039552 Transposase IS66, C-terminal M892_10625 310dd254fe45ffb02c65a4db02ed6790 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 6.7E-44 T 12-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_10625 310dd254fe45ffb02c65a4db02ed6790 513 SUPERFAMILY SSF52540 96 381 1.69E-93 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_10625 310dd254fe45ffb02c65a4db02ed6790 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M892_10625 310dd254fe45ffb02c65a4db02ed6790 513 SUPERFAMILY SSF47917 383 511 2.51E-45 T 12-10-2018 M892_10625 310dd254fe45ffb02c65a4db02ed6790 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 92 4.7E-14 T 12-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M892_10625 310dd254fe45ffb02c65a4db02ed6790 513 SUPERFAMILY SSF50615 10 94 2.94E-26 T 12-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M892_10625 310dd254fe45ffb02c65a4db02ed6790 513 Gene3D G3DSA:3.40.50.300 94 382 2.2E-129 T 12-10-2018 M892_10625 310dd254fe45ffb02c65a4db02ed6790 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 49.45 T 12-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_10625 310dd254fe45ffb02c65a4db02ed6790 513 Gene3D G3DSA:1.20.150.20 383 513 1.7E-47 T 12-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_10625 310dd254fe45ffb02c65a4db02ed6790 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 5.3E-71 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M892_10625 310dd254fe45ffb02c65a4db02ed6790 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 512 2.6E-250 T 12-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_10625 310dd254fe45ffb02c65a4db02ed6790 513 Gene3D G3DSA:2.40.30.20 1 93 4.8E-30 T 12-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M892_07115 41c79ff778f6629f82c2a57f54efbc2b 374 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 157 368 1.8E-51 T 12-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 M892_07115 41c79ff778f6629f82c2a57f54efbc2b 374 Gene3D G3DSA:3.40.430.10 152 373 5.8E-62 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 M892_07115 41c79ff778f6629f82c2a57f54efbc2b 374 Gene3D G3DSA:3.40.140.10 3 151 4.2E-48 T 12-10-2018 M892_07115 41c79ff778f6629f82c2a57f54efbc2b 374 PIRSF PIRSF006769 9 372 2.5E-117 T 12-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 M892_07115 41c79ff778f6629f82c2a57f54efbc2b 374 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 13 110 1.4E-20 T 12-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain M892_07115 41c79ff778f6629f82c2a57f54efbc2b 374 SUPERFAMILY SSF53927 14 156 5.86E-49 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 M892_07115 41c79ff778f6629f82c2a57f54efbc2b 374 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 18 365 7.5E-122 T 12-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 M892_07115 41c79ff778f6629f82c2a57f54efbc2b 374 SUPERFAMILY SSF53597 155 366 2.1E-50 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 M892_07115 41c79ff778f6629f82c2a57f54efbc2b 374 Pfam PF01872 RibD C-terminal domain 158 361 4.3E-46 T 12-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 M892_07115 41c79ff778f6629f82c2a57f54efbc2b 374 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 61 99 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 M892_24340 96d694160816790a492d715dbaba39af 204 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 83 165 1.0E-5 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M892_24340 96d694160816790a492d715dbaba39af 204 Pfam PF13419 Haloacid dehalogenase-like hydrolase 15 171 9.7E-17 T 12-10-2018 M892_24340 96d694160816790a492d715dbaba39af 204 SUPERFAMILY SSF56784 10 198 2.76E-32 T 12-10-2018 IPR036412 HAD-like superfamily M892_24340 96d694160816790a492d715dbaba39af 204 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 13 172 9.6E-10 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M892_24340 96d694160816790a492d715dbaba39af 204 Gene3D G3DSA:1.10.260.80 24 75 7.9E-52 T 12-10-2018 M892_24340 96d694160816790a492d715dbaba39af 204 Gene3D G3DSA:3.40.50.1000 12 184 7.9E-52 T 12-10-2018 IPR023214 HAD superfamily M892_02180 e459973dbb802682ddf395e48eb34457 193 ProSitePatterns PS00333 ATP-dependent DNA ligase signature 2. 88 111 - T 12-10-2018 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 M892_02180 e459973dbb802682ddf395e48eb34457 193 Pfam PF14743 DNA ligase OB-like domain 125 190 2.9E-26 T 12-10-2018 IPR029319 DNA ligase, OB-like domain M892_02180 e459973dbb802682ddf395e48eb34457 193 Gene3D G3DSA:3.30.1490.70 39 112 5.4E-17 T 12-10-2018 M892_02180 e459973dbb802682ddf395e48eb34457 193 Pfam PF01068 ATP dependent DNA ligase domain 27 111 3.6E-7 T 12-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 M892_02180 e459973dbb802682ddf395e48eb34457 193 SUPERFAMILY SSF56091 2 111 6.04E-21 T 12-10-2018 M892_02180 e459973dbb802682ddf395e48eb34457 193 SUPERFAMILY SSF50249 86 190 6.85E-31 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M892_02180 e459973dbb802682ddf395e48eb34457 193 Gene3D G3DSA:2.40.50.140 126 193 2.5E-8 T 12-10-2018 M892_04715 7702b4800c282b23c9cf18799d0909b5 284 PIRSF PIRSF015558 1 284 3.4E-95 T 12-10-2018 IPR016634 WYL domain protein, s026 type M892_04715 7702b4800c282b23c9cf18799d0909b5 284 Pfam PF13280 WYL domain 124 211 2.3E-14 T 12-10-2018 IPR026881 WYL domain M892_08235 397cc10a39188d4896b8e2feb676589f 238 Gene3D G3DSA:3.40.50.2300 2 122 1.9E-33 T 12-10-2018 M892_08235 397cc10a39188d4896b8e2feb676589f 238 SMART SM00862 156 232 2.4E-14 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M892_08235 397cc10a39188d4896b8e2feb676589f 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 2.8E-17 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M892_08235 397cc10a39188d4896b8e2feb676589f 238 SMART SM00448 4 114 6.6E-38 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_08235 397cc10a39188d4896b8e2feb676589f 238 Gene3D G3DSA:1.10.10.10 123 236 5.0E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_08235 397cc10a39188d4896b8e2feb676589f 238 SUPERFAMILY SSF52172 2 130 1.99E-36 T 12-10-2018 IPR011006 CheY-like superfamily M892_08235 397cc10a39188d4896b8e2feb676589f 238 Pfam PF00072 Response regulator receiver domain 6 113 1.1E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_08235 397cc10a39188d4896b8e2feb676589f 238 SUPERFAMILY SSF46894 137 233 9.92E-21 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M892_07075 3cf432a9fe35364fd2ff74beb973941b 294 Gene3D G3DSA:1.10.600.10 1 294 2.4E-114 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily M892_07075 3cf432a9fe35364fd2ff74beb973941b 294 Pfam PF00348 Polyprenyl synthetase 29 270 8.8E-59 T 12-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 M892_07075 3cf432a9fe35364fd2ff74beb973941b 294 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 79 95 - T 12-10-2018 IPR033749 Polyprenyl synthetase, conserved site M892_07075 3cf432a9fe35364fd2ff74beb973941b 294 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 213 225 - T 12-10-2018 IPR033749 Polyprenyl synthetase, conserved site M892_07075 3cf432a9fe35364fd2ff74beb973941b 294 SUPERFAMILY SSF48576 3 285 9.66E-86 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily M892_11450 9aa53ac93da2b9945aefd70f31ea3e3f 385 SUPERFAMILY SSF53098 8 372 4.78E-54 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_11450 9aa53ac93da2b9945aefd70f31ea3e3f 385 Pfam PF01609 Transposase DDE domain 130 292 1.8E-15 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_23615 95c56bfed1669bdb159b369d42cd99ea 204 SUPERFAMILY SSF47616 72 204 9.33E-22 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily M892_23615 95c56bfed1669bdb159b369d42cd99ea 204 SUPERFAMILY SSF52833 1 89 1.17E-19 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M892_23615 95c56bfed1669bdb159b369d42cd99ea 204 Pfam PF00043 Glutathione S-transferase, C-terminal domain 132 199 6.6E-6 T 12-10-2018 IPR004046 Glutathione S-transferase, C-terminal M892_23615 95c56bfed1669bdb159b369d42cd99ea 204 Gene3D G3DSA:3.40.30.10 1 77 1.3E-21 T 12-10-2018 M892_23615 95c56bfed1669bdb159b369d42cd99ea 204 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 79 5.0E-15 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 M892_23615 95c56bfed1669bdb159b369d42cd99ea 204 Gene3D G3DSA:1.20.1050.10 83 199 9.4E-29 T 12-10-2018 M892_13440 73e074bfb4e49e4e2e209fd8a0237ce7 243 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 238 7.9E-99 T 12-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 M892_13440 73e074bfb4e49e4e2e209fd8a0237ce7 243 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 243 133.219 T 12-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 M892_13440 73e074bfb4e49e4e2e209fd8a0237ce7 243 SUPERFAMILY SSF63892 4 241 6.67E-102 T 12-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 M892_13440 73e074bfb4e49e4e2e209fd8a0237ce7 243 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 238 2.9E-105 T 12-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 M892_13440 73e074bfb4e49e4e2e209fd8a0237ce7 243 Gene3D G3DSA:3.20.20.70 1 243 8.9E-109 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M892_17080 a6e0335f8713fd74754c8e520f4f432d 336 Pfam PF02885 Glycosyl transferase family, helical bundle domain 7 67 5.4E-17 T 12-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 M892_17080 a6e0335f8713fd74754c8e520f4f432d 336 Gene3D G3DSA:1.20.970.10 14 187 5.9E-124 T 12-10-2018 M892_17080 a6e0335f8713fd74754c8e520f4f432d 336 Gene3D G3DSA:3.40.1030.10 71 325 5.9E-124 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 M892_17080 a6e0335f8713fd74754c8e520f4f432d 336 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 10 333 2.9E-128 T 12-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 M892_17080 a6e0335f8713fd74754c8e520f4f432d 336 SUPERFAMILY SSF47648 5 71 5.23E-19 T 12-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 M892_17080 a6e0335f8713fd74754c8e520f4f432d 336 SUPERFAMILY SSF52418 74 333 4.45E-93 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 M892_17080 a6e0335f8713fd74754c8e520f4f432d 336 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 7 335 39.762 T 12-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 M892_17080 a6e0335f8713fd74754c8e520f4f432d 336 Pfam PF00591 Glycosyl transferase family, a/b domain 76 326 2.5E-105 T 12-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 M892_02165 95fc8c6d87478c55faed5d59b241c283 203 Gene3D G3DSA:2.40.30.20 94 190 2.5E-27 T 12-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M892_02165 95fc8c6d87478c55faed5d59b241c283 203 PIRSF PIRSF000498 1 203 4.2E-68 T 12-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 M892_02165 95fc8c6d87478c55faed5d59b241c283 203 SUPERFAMILY SSF63380 1 93 7.57E-24 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel M892_02165 95fc8c6d87478c55faed5d59b241c283 203 SUPERFAMILY SSF63380 93 198 7.74E-29 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel M892_02165 95fc8c6d87478c55faed5d59b241c283 203 Pfam PF00677 Lumazine binding domain 3 87 9.2E-21 T 12-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 M892_02165 95fc8c6d87478c55faed5d59b241c283 203 Pfam PF00677 Lumazine binding domain 100 184 6.9E-20 T 12-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 M892_02165 95fc8c6d87478c55faed5d59b241c283 203 Gene3D G3DSA:2.40.30.20 1 89 6.2E-30 T 12-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M892_02165 95fc8c6d87478c55faed5d59b241c283 203 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 202 8.9E-73 T 12-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 M892_19185 ff311eaa63d66a8ec5ec8ce53156dc97 72 Pfam PF09905 DNA-binding protein VF530 6 68 9.9E-35 T 12-10-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 M892_19185 ff311eaa63d66a8ec5ec8ce53156dc97 72 Gene3D G3DSA:1.10.720.30 14 71 3.9E-30 T 12-10-2018 IPR036361 SAP domain superfamily M892_14275 16640d53c070024b091e7f9f7be635cc 221 Gene3D G3DSA:3.40.50.2300 10 137 5.6E-7 T 12-10-2018 M892_14275 16640d53c070024b091e7f9f7be635cc 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 1.6E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_14275 16640d53c070024b091e7f9f7be635cc 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 1.6E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_14275 16640d53c070024b091e7f9f7be635cc 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 1.6E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_14275 16640d53c070024b091e7f9f7be635cc 221 SMART SM00421 150 207 3.0E-19 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_14275 16640d53c070024b091e7f9f7be635cc 221 Pfam PF00196 Bacterial regulatory proteins, luxR family 153 207 2.2E-18 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_14275 16640d53c070024b091e7f9f7be635cc 221 SUPERFAMILY SSF46894 144 213 6.8E-20 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M892_14275 16640d53c070024b091e7f9f7be635cc 221 Gene3D G3DSA:1.10.10.10 151 212 1.8E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_19845 8cdacc4ac6abd40fbab6afe13d307d56 115 Pfam PF01527 Transposase 10 84 7.7E-8 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 M892_21720 8cdacc4ac6abd40fbab6afe13d307d56 115 Pfam PF01527 Transposase 10 84 7.7E-8 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 M892_27320 8cdacc4ac6abd40fbab6afe13d307d56 115 Pfam PF01527 Transposase 10 84 7.7E-8 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 M892_24095 8cdacc4ac6abd40fbab6afe13d307d56 115 Pfam PF01527 Transposase 10 84 7.7E-8 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 M892_03050 8cdacc4ac6abd40fbab6afe13d307d56 115 Pfam PF01527 Transposase 10 84 7.7E-8 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 M892_26445 8cdacc4ac6abd40fbab6afe13d307d56 115 Pfam PF01527 Transposase 10 84 7.7E-8 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 M892_16905 8cdacc4ac6abd40fbab6afe13d307d56 115 Pfam PF01527 Transposase 10 84 7.7E-8 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 M892_22930 8cdacc4ac6abd40fbab6afe13d307d56 115 Pfam PF01527 Transposase 10 84 7.7E-8 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 M892_16545 8cdacc4ac6abd40fbab6afe13d307d56 115 Pfam PF01527 Transposase 10 84 7.7E-8 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 M892_22890 8cdacc4ac6abd40fbab6afe13d307d56 115 Pfam PF01527 Transposase 10 84 7.7E-8 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 M892_17790 8cdacc4ac6abd40fbab6afe13d307d56 115 Pfam PF01527 Transposase 10 84 7.7E-8 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 M892_25570 a33a4e5c52d323dd9accb4b1644cd7fb 322 Gene3D G3DSA:1.10.3720.10 90 321 7.1E-33 T 12-10-2018 IPR035906 MetI-like superfamily M892_25570 a33a4e5c52d323dd9accb4b1644cd7fb 322 SUPERFAMILY SSF161098 46 317 7.59E-36 T 12-10-2018 IPR035906 MetI-like superfamily M892_25570 a33a4e5c52d323dd9accb4b1644cd7fb 322 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 122 318 1.2E-23 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M892_25570 a33a4e5c52d323dd9accb4b1644cd7fb 322 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 45 319 8.2E-92 T 12-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 M892_09275 4a4cb33c0773a59694ff3e0baf66189e 335 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 329 9.4E-166 T 12-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 M892_09275 4a4cb33c0773a59694ff3e0baf66189e 335 Gene3D G3DSA:3.40.190.90 109 276 5.2E-125 T 12-10-2018 M892_09275 4a4cb33c0773a59694ff3e0baf66189e 335 PIRSF PIRSF004532 1 331 2.6E-134 T 12-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 M892_09275 4a4cb33c0773a59694ff3e0baf66189e 335 Gene3D G3DSA:3.30.540.10 7 319 5.2E-125 T 12-10-2018 M892_09275 4a4cb33c0773a59694ff3e0baf66189e 335 SUPERFAMILY SSF56655 1 324 3.36E-107 T 12-10-2018 M892_09275 4a4cb33c0773a59694ff3e0baf66189e 335 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 321 3.3E-128 T 12-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 M892_13845 a28ea7e581a6402aa71165668e0c0fc5 161 Gene3D G3DSA:3.30.70.560 1 159 3.7E-60 T 12-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 M892_13845 a28ea7e581a6402aa71165668e0c0fc5 161 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 134 7.6E-47 T 12-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 M892_13845 a28ea7e581a6402aa71165668e0c0fc5 161 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 12-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 M892_13845 a28ea7e581a6402aa71165668e0c0fc5 161 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 134 3.0E-38 T 12-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 M892_13845 a28ea7e581a6402aa71165668e0c0fc5 161 SUPERFAMILY SSF55083 1 159 9.81E-55 T 12-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 M892_15930 ecf25e9b9bbdd0b4fe87e509a7810f6e 900 Pfam PF00171 Aldehyde dehydrogenase family 5 400 1.6E-23 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 M892_15930 ecf25e9b9bbdd0b4fe87e509a7810f6e 900 Pfam PF00465 Iron-containing alcohol dehydrogenase 458 848 6.9E-114 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 M892_15930 ecf25e9b9bbdd0b4fe87e509a7810f6e 900 SUPERFAMILY SSF56796 452 863 6.02E-116 T 12-10-2018 M892_15930 ecf25e9b9bbdd0b4fe87e509a7810f6e 900 Gene3D G3DSA:1.20.1090.10 643 864 1.7E-60 T 12-10-2018 M892_15930 ecf25e9b9bbdd0b4fe87e509a7810f6e 900 SUPERFAMILY SSF53720 6 454 2.62E-82 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 M892_15930 ecf25e9b9bbdd0b4fe87e509a7810f6e 900 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 631 659 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 M892_15930 ecf25e9b9bbdd0b4fe87e509a7810f6e 900 Gene3D G3DSA:3.40.309.10 218 405 8.6E-177 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 M892_15930 ecf25e9b9bbdd0b4fe87e509a7810f6e 900 Gene3D G3DSA:3.40.605.10 12 446 8.6E-177 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 M892_15930 ecf25e9b9bbdd0b4fe87e509a7810f6e 900 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 719 739 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 M892_15930 ecf25e9b9bbdd0b4fe87e509a7810f6e 900 PIRSF PIRSF000111 1 865 0.0 T 12-10-2018 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 M892_15930 ecf25e9b9bbdd0b4fe87e509a7810f6e 900 Gene3D G3DSA:3.40.50.1970 451 642 1.2E-58 T 12-10-2018 M892_00200 aa5b6260c5af83804719fad29a862e8f 234 SUPERFAMILY SSF55729 123 228 1.08E-17 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_00200 aa5b6260c5af83804719fad29a862e8f 234 Pfam PF13673 Acetyltransferase (GNAT) domain 119 229 7.8E-11 T 12-10-2018 IPR000182 GNAT domain M892_00200 aa5b6260c5af83804719fad29a862e8f 234 Gene3D G3DSA:3.40.630.30 44 230 9.3E-19 T 12-10-2018 M892_05810 86d5b236371ab82bec674503717ab812 155 Gene3D G3DSA:1.10.10.10 4 55 2.6E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_05810 86d5b236371ab82bec674503717ab812 155 SUPERFAMILY SSF54909 63 152 1.34E-20 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel M892_05810 86d5b236371ab82bec674503717ab812 155 Pfam PF01037 Lrp/AsnC ligand binding domain 69 142 6.2E-22 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain M892_05810 86d5b236371ab82bec674503717ab812 155 SMART SM00344 3 112 1.4E-45 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 M892_05810 86d5b236371ab82bec674503717ab812 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 5.0E-13 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 M892_05810 86d5b236371ab82bec674503717ab812 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 5.0E-13 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 M892_05810 86d5b236371ab82bec674503717ab812 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 5.0E-13 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 M892_05810 86d5b236371ab82bec674503717ab812 155 SUPERFAMILY SSF46785 2 92 1.48E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_05810 86d5b236371ab82bec674503717ab812 155 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 12-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site M892_05810 86d5b236371ab82bec674503717ab812 155 Gene3D G3DSA:3.30.70.920 56 140 1.8E-22 T 12-10-2018 M892_05810 86d5b236371ab82bec674503717ab812 155 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 50 2.5E-18 T 12-10-2018 M892_07315 889f2f16248f62dab19d04cae3610319 118 Gene3D G3DSA:3.10.20.280 2 92 8.2E-33 T 12-10-2018 IPR037021 RnfH superfamily M892_07315 889f2f16248f62dab19d04cae3610319 118 SUPERFAMILY SSF54285 6 82 9.16E-26 T 12-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp M892_07315 889f2f16248f62dab19d04cae3610319 118 Hamap MF_00460 Protein RnfH [rnfH]. 8 98 24.592 T 12-10-2018 IPR005346 RnfH protein M892_07315 889f2f16248f62dab19d04cae3610319 118 Pfam PF03658 RnfH family Ubiquitin 8 90 2.0E-33 T 12-10-2018 IPR005346 RnfH protein M892_13775 d5a0b538004e14701d2828d7654ab701 635 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 189 635 2.7E-204 T 12-10-2018 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 M892_13775 d5a0b538004e14701d2828d7654ab701 635 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 132 161 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 M892_13775 d5a0b538004e14701d2828d7654ab701 635 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 M892_13775 d5a0b538004e14701d2828d7654ab701 635 Gene3D G3DSA:3.30.559.10 388 635 9.4E-96 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 M892_13775 d5a0b538004e14701d2828d7654ab701 635 SUPERFAMILY SSF51230 109 201 4.32E-23 T 12-10-2018 IPR011053 Single hybrid motif M892_13775 d5a0b538004e14701d2828d7654ab701 635 SUPERFAMILY SSF51230 1 94 1.96E-23 T 12-10-2018 IPR011053 Single hybrid motif M892_13775 d5a0b538004e14701d2828d7654ab701 635 Pfam PF02817 e3 binding domain 328 362 1.8E-14 T 12-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 M892_13775 d5a0b538004e14701d2828d7654ab701 635 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 233 262 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 M892_13775 d5a0b538004e14701d2828d7654ab701 635 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 404 634 3.1E-79 T 12-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 M892_13775 d5a0b538004e14701d2828d7654ab701 635 Pfam PF00364 Biotin-requiring enzyme 4 73 7.7E-21 T 12-10-2018 IPR000089 Biotin/lipoyl attachment M892_13775 d5a0b538004e14701d2828d7654ab701 635 Pfam PF00364 Biotin-requiring enzyme 110 180 8.5E-21 T 12-10-2018 IPR000089 Biotin/lipoyl attachment M892_13775 d5a0b538004e14701d2828d7654ab701 635 Pfam PF00364 Biotin-requiring enzyme 211 281 2.0E-21 T 12-10-2018 IPR000089 Biotin/lipoyl attachment M892_13775 d5a0b538004e14701d2828d7654ab701 635 SUPERFAMILY SSF52777 393 634 2.0E-80 T 12-10-2018 M892_13775 d5a0b538004e14701d2828d7654ab701 635 SUPERFAMILY SSF47005 321 366 3.4E-13 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 M892_13775 d5a0b538004e14701d2828d7654ab701 635 Gene3D G3DSA:2.40.50.100 109 186 9.8E-21 T 12-10-2018 M892_13775 d5a0b538004e14701d2828d7654ab701 635 Gene3D G3DSA:2.40.50.100 210 287 5.4E-20 T 12-10-2018 M892_13775 d5a0b538004e14701d2828d7654ab701 635 Gene3D G3DSA:2.40.50.100 1 79 1.5E-21 T 12-10-2018 M892_13775 d5a0b538004e14701d2828d7654ab701 635 Gene3D G3DSA:4.10.320.10 327 372 6.3E-21 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 M892_13775 d5a0b538004e14701d2828d7654ab701 635 SUPERFAMILY SSF51230 211 302 7.46E-23 T 12-10-2018 IPR011053 Single hybrid motif M892_10685 2fc99b9f2d5045fcfc07c645dae6ae8c 94 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 3 70 4.0E-4 T 12-10-2018 M892_10685 2fc99b9f2d5045fcfc07c645dae6ae8c 94 SUPERFAMILY SSF55021 3 76 1.5E-10 T 12-10-2018 M892_10685 2fc99b9f2d5045fcfc07c645dae6ae8c 94 Gene3D G3DSA:3.30.70.260 1 89 2.3E-11 T 12-10-2018 M892_10685 2fc99b9f2d5045fcfc07c645dae6ae8c 94 Pfam PF13710 ACT domain 12 73 2.6E-20 T 12-10-2018 M892_12675 17906209147b897fd01226d53abdda2a 290 Gene3D G3DSA:3.90.550.10 1 278 9.0E-83 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M892_12675 17906209147b897fd01226d53abdda2a 290 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 2 263 3.2E-125 T 12-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 M892_12675 17906209147b897fd01226d53abdda2a 290 Pfam PF00483 Nucleotidyl transferase 9 265 6.9E-33 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 M892_12675 17906209147b897fd01226d53abdda2a 290 SUPERFAMILY SSF53448 2 271 5.42E-65 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M892_24555 402e1e1de5ef0cd911d174a938f27372 300 Pfam PF07549 SecD/SecF GG Motif 29 55 8.0E-9 T 12-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site M892_24555 402e1e1de5ef0cd911d174a938f27372 300 PRINTS PR01755 Bacterial translocase SecF protein signature 145 159 3.5E-24 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial M892_24555 402e1e1de5ef0cd911d174a938f27372 300 PRINTS PR01755 Bacterial translocase SecF protein signature 225 240 3.5E-24 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial M892_24555 402e1e1de5ef0cd911d174a938f27372 300 PRINTS PR01755 Bacterial translocase SecF protein signature 193 211 3.5E-24 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial M892_24555 402e1e1de5ef0cd911d174a938f27372 300 PRINTS PR01755 Bacterial translocase SecF protein signature 34 49 3.5E-24 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial M892_24555 402e1e1de5ef0cd911d174a938f27372 300 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 35 276 1.1E-62 T 12-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 M892_24555 402e1e1de5ef0cd911d174a938f27372 300 Pfam PF02355 Protein export membrane protein 101 284 5.2E-54 T 12-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial M892_24555 402e1e1de5ef0cd911d174a938f27372 300 SUPERFAMILY SSF82866 80 283 7.85E-35 T 12-10-2018 M892_24555 402e1e1de5ef0cd911d174a938f27372 300 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 7 287 21.909 T 12-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 M892_24555 402e1e1de5ef0cd911d174a938f27372 300 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 108 274 7.4E-46 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial M892_24555 402e1e1de5ef0cd911d174a938f27372 300 Gene3D G3DSA:1.20.1640.10 95 290 4.1E-9 T 12-10-2018 M892_05160 cd7efe747321b67c9fec220c3a0c129b 248 Pfam PF05618 Putative ATP-dependant zinc protease 107 245 8.0E-48 T 12-10-2018 M892_05160 cd7efe747321b67c9fec220c3a0c129b 248 Gene3D G3DSA:2.40.70.10 104 235 1.4E-41 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily M892_05160 cd7efe747321b67c9fec220c3a0c129b 248 SUPERFAMILY SSF50630 107 242 1.92E-42 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily M892_05160 cd7efe747321b67c9fec220c3a0c129b 248 SUPERFAMILY SSF58100 33 121 7.59E-5 T 12-10-2018 M892_28530 41577cd0e1be8c29b1a030f1151c4cf4 196 SUPERFAMILY SSF51306 91 193 1.08E-11 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily M892_28530 41577cd0e1be8c29b1a030f1151c4cf4 196 Pfam PF13560 Helix-turn-helix domain 4 58 1.0E-9 T 12-10-2018 M892_28530 41577cd0e1be8c29b1a030f1151c4cf4 196 Gene3D G3DSA:1.10.260.40 1 83 1.8E-13 T 12-10-2018 M892_28530 41577cd0e1be8c29b1a030f1151c4cf4 196 SMART SM00530 7 62 1.5E-9 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 M892_28530 41577cd0e1be8c29b1a030f1151c4cf4 196 SUPERFAMILY SSF47413 1 66 9.85E-12 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 M892_28530 41577cd0e1be8c29b1a030f1151c4cf4 196 Gene3D G3DSA:2.10.109.10 84 195 1.5E-5 T 12-10-2018 M892_01950 76c48c7a37bff0faf4bc4fde59b3be8c 243 SUPERFAMILY SSF53098 2 242 1.21E-65 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_01950 76c48c7a37bff0faf4bc4fde59b3be8c 243 Gene3D G3DSA:1.10.740.10 132 242 4.6E-42 T 12-10-2018 IPR014737 Transposase, Tn5-like, C-terminal M892_01950 76c48c7a37bff0faf4bc4fde59b3be8c 243 Gene3D G3DSA:3.90.350.10 1 131 7.4E-32 T 12-10-2018 IPR014736 Transposase, Tn5-like, core M892_01950 76c48c7a37bff0faf4bc4fde59b3be8c 243 Pfam PF02281 Transposase Tn5 dimerisation domain 153 238 5.7E-18 T 12-10-2018 IPR003201 Transposase Tn5, dimerisation M892_01950 76c48c7a37bff0faf4bc4fde59b3be8c 243 Pfam PF01609 Transposase DDE domain 45 142 5.4E-6 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_22370 0cd600a77b3facfa30c4ee29925f3c40 692 SUPERFAMILY SSF69349 444 683 1.73E-48 T 12-10-2018 M892_22370 0cd600a77b3facfa30c4ee29925f3c40 692 Gene3D G3DSA:3.30.1920.30 229 288 2.1E-95 T 12-10-2018 M892_22370 0cd600a77b3facfa30c4ee29925f3c40 692 Gene3D G3DSA:2.40.50.230 359 458 1.4E-41 T 12-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily M892_22370 0cd600a77b3facfa30c4ee29925f3c40 692 SUPERFAMILY SSF69255 367 454 3.92E-31 T 12-10-2018 M892_22370 0cd600a77b3facfa30c4ee29925f3c40 692 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 7 522 5.5E-199 T 12-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset M892_22370 0cd600a77b3facfa30c4ee29925f3c40 692 Pfam PF05954 Phage late control gene D protein (GPD) 26 331 5.8E-80 T 12-10-2018 M892_22370 0cd600a77b3facfa30c4ee29925f3c40 692 Gene3D G3DSA:2.30.110.50 15 332 2.1E-95 T 12-10-2018 M892_22370 0cd600a77b3facfa30c4ee29925f3c40 692 SUPERFAMILY SSF69279 7 183 2.13E-58 T 12-10-2018 M892_22370 0cd600a77b3facfa30c4ee29925f3c40 692 SUPERFAMILY SSF69279 201 367 2.98E-32 T 12-10-2018 M892_22370 0cd600a77b3facfa30c4ee29925f3c40 692 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 19 505 1.3E-127 T 12-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein M892_22370 0cd600a77b3facfa30c4ee29925f3c40 692 Gene3D G3DSA:3.55.50.10 96 187 2.1E-95 T 12-10-2018 M892_17975 54f3bef16cae9663b5b1cab5fc79a764 364 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_17975 54f3bef16cae9663b5b1cab5fc79a764 364 Gene3D G3DSA:2.40.50.140 283 346 4.2E-14 T 12-10-2018 M892_17975 54f3bef16cae9663b5b1cab5fc79a764 364 Gene3D G3DSA:3.40.50.300 1 238 5.9E-78 T 12-10-2018 M892_17975 54f3bef16cae9663b5b1cab5fc79a764 364 Pfam PF00005 ABC transporter 20 161 5.5E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_17975 54f3bef16cae9663b5b1cab5fc79a764 364 SMART SM00382 28 210 1.4E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_17975 54f3bef16cae9663b5b1cab5fc79a764 364 SUPERFAMILY SSF52540 4 242 7.6E-86 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_17975 54f3bef16cae9663b5b1cab5fc79a764 364 SUPERFAMILY SSF50331 237 360 6.56E-16 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal M892_17975 54f3bef16cae9663b5b1cab5fc79a764 364 Gene3D G3DSA:2.40.50.100 239 360 4.2E-14 T 12-10-2018 M892_24670 c21a12dcdaf7a95cad346d7e8f154e5c 125 Pfam PF12680 SnoaL-like domain 8 102 1.8E-11 T 12-10-2018 IPR037401 SnoaL-like domain M892_24670 c21a12dcdaf7a95cad346d7e8f154e5c 125 Gene3D G3DSA:3.10.450.50 1 125 1.5E-34 T 12-10-2018 M892_24670 c21a12dcdaf7a95cad346d7e8f154e5c 125 SUPERFAMILY SSF54427 1 122 3.32E-31 T 12-10-2018 IPR032710 NTF2-like domain superfamily M892_05355 261dfc12fff15809f544c5db40b7c0ed 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 48 217 1.5E-20 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M892_05355 261dfc12fff15809f544c5db40b7c0ed 225 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 112 1.9E-23 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 M892_05355 261dfc12fff15809f544c5db40b7c0ed 225 Gene3D G3DSA:1.10.3720.10 1 218 1.6E-50 T 12-10-2018 IPR035906 MetI-like superfamily M892_05355 261dfc12fff15809f544c5db40b7c0ed 225 SUPERFAMILY SSF161098 11 203 4.19E-41 T 12-10-2018 IPR035906 MetI-like superfamily M892_16745 73578f8a038f89fd1e4971acefded806 378 SUPERFAMILY SSF111369 49 254 3.01E-15 T 12-10-2018 M892_16745 73578f8a038f89fd1e4971acefded806 378 Gene3D G3DSA:2.40.50.100 56 216 1.1E-53 T 12-10-2018 M892_16745 73578f8a038f89fd1e4971acefded806 378 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 34 367 1.5E-36 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 M892_16745 73578f8a038f89fd1e4971acefded806 378 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 56 256 4.4E-16 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain M892_16745 73578f8a038f89fd1e4971acefded806 378 Gene3D G3DSA:2.40.30.170 45 307 1.1E-53 T 12-10-2018 M892_16745 73578f8a038f89fd1e4971acefded806 378 Gene3D G3DSA:2.40.420.20 40 367 1.1E-53 T 12-10-2018 M892_16745 73578f8a038f89fd1e4971acefded806 378 Gene3D G3DSA:1.10.287.470 90 176 1.1E-53 T 12-10-2018 M892_09815 f10e98879cda8cf02636fabc049743de 146 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 30 1.7E-10 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M892_09815 f10e98879cda8cf02636fabc049743de 146 Gene3D G3DSA:3.30.700.10 33 141 3.3E-43 T 12-10-2018 M892_09815 f10e98879cda8cf02636fabc049743de 146 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 30 2.4E-9 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M892_09815 f10e98879cda8cf02636fabc049743de 146 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 9 142 2.0E-57 T 12-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 M892_09815 f10e98879cda8cf02636fabc049743de 146 SUPERFAMILY SSF54523 36 142 2.15E-37 T 12-10-2018 M892_09815 f10e98879cda8cf02636fabc049743de 146 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 9 29 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M892_09815 f10e98879cda8cf02636fabc049743de 146 Pfam PF08334 Type II secretion system (T2SS), protein G 33 141 8.4E-42 T 12-10-2018 IPR013545 Type II secretion system protein G M892_09815 f10e98879cda8cf02636fabc049743de 146 PRINTS PR00813 Bacterial general secretion pathway protein G signature 46 64 4.2E-22 T 12-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 M892_09815 f10e98879cda8cf02636fabc049743de 146 PRINTS PR00813 Bacterial general secretion pathway protein G signature 10 35 4.2E-22 T 12-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 M892_02305 e56cbb526548003b00c32501b81b093e 313 SUPERFAMILY SSF103481 73 165 1.57E-8 T 12-10-2018 M892_02305 e56cbb526548003b00c32501b81b093e 313 Pfam PF00892 EamA-like transporter family 25 162 1.6E-9 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M892_02305 e56cbb526548003b00c32501b81b093e 313 Pfam PF00892 EamA-like transporter family 179 309 2.0E-17 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M892_02305 e56cbb526548003b00c32501b81b093e 313 SUPERFAMILY SSF103481 233 312 2.48E-13 T 12-10-2018 M892_23995 c2f271ce60243fb183e05cd1eca4fde5 132 Gene3D G3DSA:3.30.1330.40 9 127 2.3E-28 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 M892_23995 c2f271ce60243fb183e05cd1eca4fde5 132 Pfam PF01042 Endoribonuclease L-PSP 17 126 2.7E-22 T 12-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 M892_23995 c2f271ce60243fb183e05cd1eca4fde5 132 SUPERFAMILY SSF55298 14 128 1.48E-28 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 M892_26660 ed6b4928ac5fb5261432c4d30ae5b9fa 491 Pfam PF07690 Major Facilitator Superfamily 10 423 3.4E-11 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 M892_26660 ed6b4928ac5fb5261432c4d30ae5b9fa 491 SUPERFAMILY SSF103473 9 475 6.93E-19 T 12-10-2018 IPR036259 MFS transporter superfamily M892_26660 ed6b4928ac5fb5261432c4d30ae5b9fa 491 Gene3D G3DSA:1.20.1250.20 7 475 4.2E-62 T 12-10-2018 M892_19790 bee7ef14619e4dbb4b53d9fd7f6b1d3c 1620 Gene3D G3DSA:3.40.50.300 1255 1415 1.0E-13 T 12-10-2018 M892_19790 bee7ef14619e4dbb4b53d9fd7f6b1d3c 1620 SMART SM00382 1258 1407 1.4E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_19790 bee7ef14619e4dbb4b53d9fd7f6b1d3c 1620 Pfam PF12458 ATPase involved in DNA repair 29 477 6.5E-155 T 12-10-2018 IPR020958 Domain of unknown function DUF3686 M892_19790 bee7ef14619e4dbb4b53d9fd7f6b1d3c 1620 Pfam PF07728 AAA domain (dynein-related subfamily) 1262 1385 4.6E-7 T 12-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 M892_19790 bee7ef14619e4dbb4b53d9fd7f6b1d3c 1620 SUPERFAMILY SSF52540 1221 1408 1.57E-15 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_11985 2aa363e9cd0dc6b9be473016dcaa8413 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 193 226 3.6E-9 T 12-10-2018 IPR001451 Hexapeptide repeat M892_11985 2aa363e9cd0dc6b9be473016dcaa8413 273 SUPERFAMILY SSF51161 8 258 2.6E-63 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily M892_11985 2aa363e9cd0dc6b9be473016dcaa8413 273 Pfam PF06426 Serine acetyltransferase, N-terminal 9 112 4.8E-37 T 12-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 M892_11985 2aa363e9cd0dc6b9be473016dcaa8413 273 Gene3D G3DSA:2.160.10.10 143 273 4.0E-37 T 12-10-2018 M892_11985 2aa363e9cd0dc6b9be473016dcaa8413 273 Gene3D G3DSA:1.10.3130.10 1 142 3.3E-52 T 12-10-2018 M892_11985 2aa363e9cd0dc6b9be473016dcaa8413 273 PIRSF PIRSF000441 76 266 4.1E-55 T 12-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 M892_11985 2aa363e9cd0dc6b9be473016dcaa8413 273 PIRSF PIRSF000441 7 82 160.0 T 12-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 M892_11985 2aa363e9cd0dc6b9be473016dcaa8413 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 202 230 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 M892_11985 2aa363e9cd0dc6b9be473016dcaa8413 273 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 82 242 1.3E-74 T 12-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 M892_11985 2aa363e9cd0dc6b9be473016dcaa8413 273 SMART SM00971 9 113 3.3E-58 T 12-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 M892_26830 e65ba1aafd3b129f0fbfee7a48289603 266 Pfam PF12833 Helix-turn-helix domain 179 255 1.7E-17 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M892_26830 e65ba1aafd3b129f0fbfee7a48289603 266 Pfam PF02311 AraC-like ligand binding domain 26 106 1.8E-4 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 M892_26830 e65ba1aafd3b129f0fbfee7a48289603 266 SUPERFAMILY SSF51182 29 216 5.34E-7 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily M892_26830 e65ba1aafd3b129f0fbfee7a48289603 266 SMART SM00342 172 254 1.1E-16 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M892_26830 e65ba1aafd3b129f0fbfee7a48289603 266 Gene3D G3DSA:1.10.10.60 156 258 5.6E-20 T 12-10-2018 M892_26830 e65ba1aafd3b129f0fbfee7a48289603 266 Gene3D G3DSA:2.60.120.10 9 85 4.7E-5 T 12-10-2018 IPR014710 RmlC-like jelly roll fold M892_26830 e65ba1aafd3b129f0fbfee7a48289603 266 SUPERFAMILY SSF46689 208 256 1.51E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_05370 3ac2cb5552e556fff01ffec23c83201a 256 SMART SM00382 31 229 1.2E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_05370 3ac2cb5552e556fff01ffec23c83201a 256 Gene3D G3DSA:3.40.50.300 4 255 1.2E-73 T 12-10-2018 M892_05370 3ac2cb5552e556fff01ffec23c83201a 256 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_05370 3ac2cb5552e556fff01ffec23c83201a 256 SUPERFAMILY SSF52540 7 251 4.18E-74 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_05370 3ac2cb5552e556fff01ffec23c83201a 256 Pfam PF00005 ABC transporter 22 181 1.0E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_05370 3ac2cb5552e556fff01ffec23c83201a 256 PIRSF PIRSF039085 3 256 1.8E-116 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 M892_13985 8811e1bd909e86e396e13da4c27cfdf1 341 Pfam PF08468 Methyltransferase small domain N-terminal 8 163 2.9E-56 T 12-10-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 M892_13985 8811e1bd909e86e396e13da4c27cfdf1 341 SUPERFAMILY SSF53335 152 332 8.07E-27 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M892_13985 8811e1bd909e86e396e13da4c27cfdf1 341 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 269 275 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 M892_13985 8811e1bd909e86e396e13da4c27cfdf1 341 Pfam PF05175 Methyltransferase small domain 172 336 1.3E-60 T 12-10-2018 IPR007848 Methyltransferase small domain GO:0008168 M892_13985 8811e1bd909e86e396e13da4c27cfdf1 341 Gene3D G3DSA:3.40.50.150 1 157 7.9E-49 T 12-10-2018 M892_13985 8811e1bd909e86e396e13da4c27cfdf1 341 Gene3D G3DSA:3.40.50.150 158 341 2.8E-41 T 12-10-2018 M892_13985 8811e1bd909e86e396e13da4c27cfdf1 341 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 4 340 46.612 T 12-10-2018 IPR023543 rRNA small subunit methyltransferase C GO:0008649 M892_16470 1de0545fd444f18ed537141f7fc2c6aa 443 Pfam PF13006 Insertion element 4 transposase N-terminal 16 108 1.1E-24 T 12-10-2018 IPR024473 Transposase, IS4, N-terminal M892_16470 1de0545fd444f18ed537141f7fc2c6aa 443 Pfam PF01609 Transposase DDE domain 126 357 1.0E-22 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_16470 1de0545fd444f18ed537141f7fc2c6aa 443 SUPERFAMILY SSF53098 103 412 1.37E-18 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_20240 1de0545fd444f18ed537141f7fc2c6aa 443 Pfam PF13006 Insertion element 4 transposase N-terminal 16 108 1.1E-24 T 12-10-2018 IPR024473 Transposase, IS4, N-terminal M892_20240 1de0545fd444f18ed537141f7fc2c6aa 443 Pfam PF01609 Transposase DDE domain 126 357 1.0E-22 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_20240 1de0545fd444f18ed537141f7fc2c6aa 443 SUPERFAMILY SSF53098 103 412 1.37E-18 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_20690 1de0545fd444f18ed537141f7fc2c6aa 443 Pfam PF13006 Insertion element 4 transposase N-terminal 16 108 1.1E-24 T 12-10-2018 IPR024473 Transposase, IS4, N-terminal M892_20690 1de0545fd444f18ed537141f7fc2c6aa 443 Pfam PF01609 Transposase DDE domain 126 357 1.0E-22 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_20690 1de0545fd444f18ed537141f7fc2c6aa 443 SUPERFAMILY SSF53098 103 412 1.37E-18 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_24795 1de0545fd444f18ed537141f7fc2c6aa 443 Pfam PF13006 Insertion element 4 transposase N-terminal 16 108 1.1E-24 T 12-10-2018 IPR024473 Transposase, IS4, N-terminal M892_24795 1de0545fd444f18ed537141f7fc2c6aa 443 Pfam PF01609 Transposase DDE domain 126 357 1.0E-22 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_24795 1de0545fd444f18ed537141f7fc2c6aa 443 SUPERFAMILY SSF53098 103 412 1.37E-18 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_08950 1de0545fd444f18ed537141f7fc2c6aa 443 Pfam PF13006 Insertion element 4 transposase N-terminal 16 108 1.1E-24 T 12-10-2018 IPR024473 Transposase, IS4, N-terminal M892_08950 1de0545fd444f18ed537141f7fc2c6aa 443 Pfam PF01609 Transposase DDE domain 126 357 1.0E-22 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_08950 1de0545fd444f18ed537141f7fc2c6aa 443 SUPERFAMILY SSF53098 103 412 1.37E-18 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_26200 1de0545fd444f18ed537141f7fc2c6aa 443 Pfam PF13006 Insertion element 4 transposase N-terminal 16 108 1.1E-24 T 12-10-2018 IPR024473 Transposase, IS4, N-terminal M892_26200 1de0545fd444f18ed537141f7fc2c6aa 443 Pfam PF01609 Transposase DDE domain 126 357 1.0E-22 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_26200 1de0545fd444f18ed537141f7fc2c6aa 443 SUPERFAMILY SSF53098 103 412 1.37E-18 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_17910 1de0545fd444f18ed537141f7fc2c6aa 443 Pfam PF13006 Insertion element 4 transposase N-terminal 16 108 1.1E-24 T 12-10-2018 IPR024473 Transposase, IS4, N-terminal M892_17910 1de0545fd444f18ed537141f7fc2c6aa 443 Pfam PF01609 Transposase DDE domain 126 357 1.0E-22 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_17910 1de0545fd444f18ed537141f7fc2c6aa 443 SUPERFAMILY SSF53098 103 412 1.37E-18 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_10755 ed8776697a4c6a150a8088bd966dda5a 233 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 29 229 3.3E-69 T 12-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 M892_10755 ed8776697a4c6a150a8088bd966dda5a 233 Pfam PF03006 Haemolysin-III related 28 223 4.6E-38 T 12-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 M892_18120 5f3513240c7985b82f661b601e525e83 103 Pfam PF07883 Cupin domain 35 101 5.2E-11 T 12-10-2018 IPR013096 Cupin 2, conserved barrel M892_18120 5f3513240c7985b82f661b601e525e83 103 SUPERFAMILY SSF51182 1 102 3.57E-19 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily M892_18120 5f3513240c7985b82f661b601e525e83 103 Gene3D G3DSA:2.60.120.10 13 103 2.6E-37 T 12-10-2018 IPR014710 RmlC-like jelly roll fold M892_14300 c96e6a2d767fc430392367969bd4ac07 147 Gene3D G3DSA:1.20.120.1220 1 114 6.1E-6 T 12-10-2018 M892_14300 c96e6a2d767fc430392367969bd4ac07 147 Pfam PF01478 Type IV leader peptidase family 7 104 6.1E-11 T 12-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 M892_03790 56838af54fbab85302e385803191a4c8 196 SUPERFAMILY SSF48150 5 184 2.82E-73 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 M892_03790 56838af54fbab85302e385803191a4c8 196 Pfam PF03352 Methyladenine glycosylase 8 183 5.9E-73 T 12-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 M892_03790 56838af54fbab85302e385803191a4c8 196 Gene3D G3DSA:1.10.340.30 3 188 6.6E-76 T 12-10-2018 M892_12680 73a31828ba4842176107055dba3d4d79 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 154 208 2.1E-18 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_12680 73a31828ba4842176107055dba3d4d79 214 Gene3D G3DSA:1.10.10.10 144 214 1.3E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_12680 73a31828ba4842176107055dba3d4d79 214 SUPERFAMILY SSF46894 141 210 1.63E-18 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M892_12680 73a31828ba4842176107055dba3d4d79 214 SMART SM00421 151 208 1.5E-20 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_12680 73a31828ba4842176107055dba3d4d79 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 5.0E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_12680 73a31828ba4842176107055dba3d4d79 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 5.0E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_12680 73a31828ba4842176107055dba3d4d79 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 5.0E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_12680 73a31828ba4842176107055dba3d4d79 214 Gene3D G3DSA:3.40.50.2300 23 142 4.8E-25 T 12-10-2018 M892_26535 8e47189e8d6ab935cb522163b6dd7b87 87 Pfam PF11216 Protein of unknown function (DUF3012) 56 87 1.3E-20 T 12-10-2018 IPR021379 Protein of unknown function DUF3012 M892_26535 8e47189e8d6ab935cb522163b6dd7b87 87 Pfam PF11216 Protein of unknown function (DUF3012) 21 52 6.2E-19 T 12-10-2018 IPR021379 Protein of unknown function DUF3012 M892_10135 12081355b7b788a4de31d4a4243a1621 107 Pfam PF10625 Universal stress protein B (UspB) 1 106 6.0E-51 T 12-10-2018 IPR019598 Universal stress protein B M892_10135 12081355b7b788a4de31d4a4243a1621 107 Hamap MF_01088 Universal stress protein B [uspB]. 1 107 38.479 T 12-10-2018 IPR019598 Universal stress protein B M892_20305 c2db74841727801da4650ca0f3cc22a0 171 SUPERFAMILY SSF55729 5 170 4.25E-24 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_20305 c2db74841727801da4650ca0f3cc22a0 171 Gene3D G3DSA:3.40.630.30 1 171 5.3E-30 T 12-10-2018 M892_20305 c2db74841727801da4650ca0f3cc22a0 171 Pfam PF13420 Acetyltransferase (GNAT) domain 57 166 8.3E-12 T 12-10-2018 M892_12440 5069388bc9325a342fd66dc439202c74 490 PIRSF PIRSF000350 1 473 1.8E-61 T 12-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 M892_12440 5069388bc9325a342fd66dc439202c74 490 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 174 192 9.8E-20 T 12-10-2018 M892_12440 5069388bc9325a342fd66dc439202c74 490 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 9.8E-20 T 12-10-2018 M892_12440 5069388bc9325a342fd66dc439202c74 490 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 268 284 9.8E-20 T 12-10-2018 M892_12440 5069388bc9325a342fd66dc439202c74 490 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 298 320 9.8E-20 T 12-10-2018 M892_12440 5069388bc9325a342fd66dc439202c74 490 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 135 153 9.8E-20 T 12-10-2018 M892_12440 5069388bc9325a342fd66dc439202c74 490 Gene3D G3DSA:3.50.50.60 7 336 5.3E-95 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_12440 5069388bc9325a342fd66dc439202c74 490 Gene3D G3DSA:1.10.287.990 37 107 5.3E-95 T 12-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 M892_12440 5069388bc9325a342fd66dc439202c74 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 269 283 1.8E-40 T 12-10-2018 M892_12440 5069388bc9325a342fd66dc439202c74 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 1.8E-40 T 12-10-2018 M892_12440 5069388bc9325a342fd66dc439202c74 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 313 320 1.8E-40 T 12-10-2018 M892_12440 5069388bc9325a342fd66dc439202c74 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 1.8E-40 T 12-10-2018 M892_12440 5069388bc9325a342fd66dc439202c74 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 174 199 1.8E-40 T 12-10-2018 M892_12440 5069388bc9325a342fd66dc439202c74 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 350 371 1.8E-40 T 12-10-2018 M892_12440 5069388bc9325a342fd66dc439202c74 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 418 433 1.8E-40 T 12-10-2018 M892_12440 5069388bc9325a342fd66dc439202c74 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 138 147 1.8E-40 T 12-10-2018 M892_12440 5069388bc9325a342fd66dc439202c74 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 440 460 1.8E-40 T 12-10-2018 M892_12440 5069388bc9325a342fd66dc439202c74 490 Gene3D G3DSA:3.30.390.30 353 476 2.4E-42 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 M892_12440 5069388bc9325a342fd66dc439202c74 490 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 356 465 4.4E-17 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 M892_12440 5069388bc9325a342fd66dc439202c74 490 SUPERFAMILY SSF55424 355 473 8.08E-25 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 M892_12440 5069388bc9325a342fd66dc439202c74 490 SUPERFAMILY SSF51905 1 373 3.78E-43 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_12440 5069388bc9325a342fd66dc439202c74 490 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 333 3.2E-43 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 M892_12440 5069388bc9325a342fd66dc439202c74 490 Gene3D G3DSA:3.50.50.60 147 275 5.3E-95 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_15605 8a1e27a21725ec87a68ced709cd7dc6b 181 Pfam PF00156 Phosphoribosyl transferase domain 30 154 4.9E-15 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 M892_15605 8a1e27a21725ec87a68ced709cd7dc6b 181 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 10 177 4.6E-72 T 12-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 M892_15605 8a1e27a21725ec87a68ced709cd7dc6b 181 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 9 178 38.009 T 12-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 M892_15605 8a1e27a21725ec87a68ced709cd7dc6b 181 Gene3D G3DSA:3.40.50.2020 1 181 3.1E-66 T 12-10-2018 M892_15605 8a1e27a21725ec87a68ced709cd7dc6b 181 SUPERFAMILY SSF53271 12 178 2.42E-52 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like M892_19545 c1851b556cc5b8009ce8d521d69061bb 299 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 121 283 1.9E-27 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M892_19545 c1851b556cc5b8009ce8d521d69061bb 299 SUPERFAMILY SSF161098 99 281 9.03E-38 T 12-10-2018 IPR035906 MetI-like superfamily M892_19545 c1851b556cc5b8009ce8d521d69061bb 299 Gene3D G3DSA:1.10.3720.10 95 288 3.1E-33 T 12-10-2018 IPR035906 MetI-like superfamily M892_11900 3cbf106db55f9928d8ceab81bfd53f10 548 SUPERFAMILY SSF52029 185 376 3.44E-83 T 12-10-2018 IPR027409 GroEL-like apical domain superfamily M892_11900 3cbf106db55f9928d8ceab81bfd53f10 548 SUPERFAMILY SSF48592 3 230 3.14E-65 T 12-10-2018 IPR027413 GroEL-like equatorial domain superfamily M892_11900 3cbf106db55f9928d8ceab81bfd53f10 548 PRINTS PR00298 60kDa chaperonin signature 350 375 2.5E-74 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 M892_11900 3cbf106db55f9928d8ceab81bfd53f10 548 PRINTS PR00298 60kDa chaperonin signature 27 53 2.5E-74 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 M892_11900 3cbf106db55f9928d8ceab81bfd53f10 548 PRINTS PR00298 60kDa chaperonin signature 83 110 2.5E-74 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 M892_11900 3cbf106db55f9928d8ceab81bfd53f10 548 PRINTS PR00298 60kDa chaperonin signature 398 419 2.5E-74 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 M892_11900 3cbf106db55f9928d8ceab81bfd53f10 548 PRINTS PR00298 60kDa chaperonin signature 268 291 2.5E-74 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 M892_11900 3cbf106db55f9928d8ceab81bfd53f10 548 Gene3D G3DSA:3.30.260.10 138 410 6.6E-237 T 12-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily M892_11900 3cbf106db55f9928d8ceab81bfd53f10 548 Gene3D G3DSA:3.50.7.10 173 379 6.6E-237 T 12-10-2018 IPR027409 GroEL-like apical domain superfamily M892_11900 3cbf106db55f9928d8ceab81bfd53f10 548 SUPERFAMILY SSF48592 372 525 4.12E-31 T 12-10-2018 IPR027413 GroEL-like equatorial domain superfamily M892_11900 3cbf106db55f9928d8ceab81bfd53f10 548 Hamap MF_00600 60 kDa chaperonin [groL]. 2 547 41.486 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 M892_11900 3cbf106db55f9928d8ceab81bfd53f10 548 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 12-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 M892_11900 3cbf106db55f9928d8ceab81bfd53f10 548 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 4.1E-254 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 M892_11900 3cbf106db55f9928d8ceab81bfd53f10 548 Gene3D G3DSA:1.10.560.10 8 521 6.6E-237 T 12-10-2018 IPR027413 GroEL-like equatorial domain superfamily M892_11900 3cbf106db55f9928d8ceab81bfd53f10 548 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 4.1E-96 T 12-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 M892_11805 91c9014ed50d9264e7f4fd6fb747fad1 575 Gene3D G3DSA:1.20.1730.10 21 330 2.0E-35 T 12-10-2018 IPR038377 Sodium/glucose symporter superfamily M892_11805 91c9014ed50d9264e7f4fd6fb747fad1 575 Gene3D G3DSA:1.20.1730.10 346 555 1.3E-26 T 12-10-2018 IPR038377 Sodium/glucose symporter superfamily M892_11805 91c9014ed50d9264e7f4fd6fb747fad1 575 Pfam PF00474 Sodium:solute symporter family 33 296 2.8E-36 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 M892_11805 91c9014ed50d9264e7f4fd6fb747fad1 575 Pfam PF00474 Sodium:solute symporter family 376 491 5.3E-16 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 M892_11805 91c9014ed50d9264e7f4fd6fb747fad1 575 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 7 566 2.7E-257 T 12-10-2018 IPR019899 Sodium/solute symporter, VC2705 subfamily M892_00680 c4b1d2990be8c30847bdd5a9cd200566 430 Gene3D G3DSA:3.40.50.1980 225 342 2.6E-109 T 12-10-2018 M892_00680 c4b1d2990be8c30847bdd5a9cd200566 430 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 7 420 33.149 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 M892_00680 c4b1d2990be8c30847bdd5a9cd200566 430 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 25 419 9.8E-142 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 M892_00680 c4b1d2990be8c30847bdd5a9cd200566 430 Pfam PF00815 Histidinol dehydrogenase 14 420 6.6E-144 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 M892_00680 c4b1d2990be8c30847bdd5a9cd200566 430 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 221 254 - T 12-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 M892_00680 c4b1d2990be8c30847bdd5a9cd200566 430 PRINTS PR00083 Histidinol dehydrogenase signature 162 188 1.2E-60 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 M892_00680 c4b1d2990be8c30847bdd5a9cd200566 430 PRINTS PR00083 Histidinol dehydrogenase signature 313 338 1.2E-60 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 M892_00680 c4b1d2990be8c30847bdd5a9cd200566 430 PRINTS PR00083 Histidinol dehydrogenase signature 100 127 1.2E-60 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 M892_00680 c4b1d2990be8c30847bdd5a9cd200566 430 PRINTS PR00083 Histidinol dehydrogenase signature 192 217 1.2E-60 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 M892_00680 c4b1d2990be8c30847bdd5a9cd200566 430 PRINTS PR00083 Histidinol dehydrogenase signature 354 372 1.2E-60 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 M892_00680 c4b1d2990be8c30847bdd5a9cd200566 430 PRINTS PR00083 Histidinol dehydrogenase signature 25 49 1.2E-60 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 M892_00680 c4b1d2990be8c30847bdd5a9cd200566 430 PRINTS PR00083 Histidinol dehydrogenase signature 244 263 1.2E-60 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 M892_00680 c4b1d2990be8c30847bdd5a9cd200566 430 PIRSF PIRSF000099 4 423 3.8E-124 T 12-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 M892_00680 c4b1d2990be8c30847bdd5a9cd200566 430 SUPERFAMILY SSF53720 12 421 7.45E-72 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 M892_00680 c4b1d2990be8c30847bdd5a9cd200566 430 Gene3D G3DSA:3.40.50.1980 22 223 2.6E-109 T 12-10-2018 M892_24285 a585daee5dc5f449cb95e93ff393e037 264 SUPERFAMILY SSF56534 3 235 6.41E-95 T 12-10-2018 IPR036329 Aromatic amino acid monoxygenase, C-terminal domain superfamily M892_24285 a585daee5dc5f449cb95e93ff393e037 264 Pfam PF00351 Biopterin-dependent aromatic amino acid hydroxylase 10 229 3.1E-45 T 12-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 M892_24285 a585daee5dc5f449cb95e93ff393e037 264 ProSitePatterns PS00367 Biopterin-dependent aromatic amino acid hydroxylases signature. 115 126 - T 12-10-2018 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site GO:0004497|GO:0005506|GO:0009072|GO:0055114 M892_24285 a585daee5dc5f449cb95e93ff393e037 264 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 176 194 3.9E-8 T 12-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 M892_24285 a585daee5dc5f449cb95e93ff393e037 264 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 72 94 3.9E-8 T 12-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 M892_24285 a585daee5dc5f449cb95e93ff393e037 264 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 208 227 3.9E-8 T 12-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 M892_24285 a585daee5dc5f449cb95e93ff393e037 264 Gene3D G3DSA:1.10.800.10 1 264 1.9E-94 T 12-10-2018 IPR036951 Aromatic amino acid hydroxylase superfamily GO:0004497|GO:0005506|GO:0009072|GO:0055114 M892_24285 a585daee5dc5f449cb95e93ff393e037 264 TIGRFAM TIGR01267 Phe4hydrox_mono: phenylalanine-4-hydroxylase 13 238 1.1E-93 T 12-10-2018 IPR005960 Phenylalanine-4-hydroxylase, monomeric form GO:0004505|GO:0006559|GO:0055114 KEGG: 00360+1.14.16.1|KEGG: 00400+1.14.16.1|KEGG: 00790+1.14.16.1|MetaCyc: PWY-6134|MetaCyc: PWY-7158 M892_13240 87831bb8dfa097e639ee1a9e1c622058 368 SUPERFAMILY SSF52540 4 334 1.63E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_13240 87831bb8dfa097e639ee1a9e1c622058 368 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 342 1.3E-125 T 12-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 M892_13240 87831bb8dfa097e639ee1a9e1c622058 368 Gene3D G3DSA:3.40.50.300 99 356 6.4E-87 T 12-10-2018 M892_13240 87831bb8dfa097e639ee1a9e1c622058 368 Gene3D G3DSA:3.30.450.90 1 97 1.1E-22 T 12-10-2018 M892_13240 87831bb8dfa097e639ee1a9e1c622058 368 Pfam PF00437 Type II/IV secretion system protein 116 249 6.4E-36 T 12-10-2018 IPR001482 Type II/IV secretion system protein M892_15935 62f1461e2624a1ed62a33918de6e7905 430 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 61 74 3.0E-6 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M892_15935 62f1461e2624a1ed62a33918de6e7905 430 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 187 200 3.0E-6 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M892_15935 62f1461e2624a1ed62a33918de6e7905 430 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 129 147 3.0E-6 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M892_15935 62f1461e2624a1ed62a33918de6e7905 430 SUPERFAMILY SSF56672 15 360 3.89E-51 T 12-10-2018 M892_15935 62f1461e2624a1ed62a33918de6e7905 430 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 66 272 1.3E-42 T 12-10-2018 IPR000477 Reverse transcriptase domain M892_15935 62f1461e2624a1ed62a33918de6e7905 430 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 8 350 2.3E-117 T 12-10-2018 IPR030931 Group II intron reverse transcriptase/maturase M892_15935 62f1461e2624a1ed62a33918de6e7905 430 Pfam PF08388 Group II intron, maturase-specific domain 288 356 2.5E-14 T 12-10-2018 IPR013597 Group II intron, maturase-specific M892_13285 cbeb31204196ab912f47833b041838e4 675 ProSitePatterns PS00802 Transketolase signature 2. 478 494 - T 12-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 M892_13285 cbeb31204196ab912f47833b041838e4 675 Pfam PF02779 Transketolase, pyrimidine binding domain 365 535 7.1E-48 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain M892_13285 cbeb31204196ab912f47833b041838e4 675 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 15 344 5.4E-166 T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 M892_13285 cbeb31204196ab912f47833b041838e4 675 Pfam PF02780 Transketolase, C-terminal domain 556 666 4.3E-21 T 12-10-2018 IPR033248 Transketolase, C-terminal domain M892_13285 cbeb31204196ab912f47833b041838e4 675 SUPERFAMILY SSF52922 544 675 2.36E-45 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 M892_13285 cbeb31204196ab912f47833b041838e4 675 Gene3D G3DSA:3.40.50.970 13 336 5.0E-130 T 12-10-2018 M892_13285 cbeb31204196ab912f47833b041838e4 675 SMART SM00861 365 536 4.6E-67 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain M892_13285 cbeb31204196ab912f47833b041838e4 675 SUPERFAMILY SSF52518 16 330 1.13E-119 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold M892_13285 cbeb31204196ab912f47833b041838e4 675 SUPERFAMILY SSF52518 344 537 1.56E-68 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold M892_13285 cbeb31204196ab912f47833b041838e4 675 Gene3D G3DSA:3.40.50.920 549 675 3.2E-47 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 M892_13285 cbeb31204196ab912f47833b041838e4 675 Gene3D G3DSA:3.40.50.970 337 548 1.1E-85 T 12-10-2018 M892_13285 cbeb31204196ab912f47833b041838e4 675 TIGRFAM TIGR00232 tktlase_bact: transketolase 16 674 0.0 T 12-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 M892_13285 cbeb31204196ab912f47833b041838e4 675 ProSitePatterns PS00801 Transketolase signature 1. 23 43 - T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 M892_16415 77b73089c1576c2ae47513321bdc53e6 307 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 307 3.4E-45 T 12-10-2018 IPR020801 Polyketide synthase, acyl transferase domain M892_16415 77b73089c1576c2ae47513321bdc53e6 307 SUPERFAMILY SSF52151 4 305 2.88E-82 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase M892_16415 77b73089c1576c2ae47513321bdc53e6 307 PIRSF PIRSF000446 1 307 7.6E-137 T 12-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 M892_16415 77b73089c1576c2ae47513321bdc53e6 307 SUPERFAMILY SSF55048 128 197 1.31E-18 T 12-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding M892_16415 77b73089c1576c2ae47513321bdc53e6 307 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 291 4.3E-127 T 12-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 M892_16415 77b73089c1576c2ae47513321bdc53e6 307 Gene3D G3DSA:3.40.366.10 7 286 3.0E-108 T 12-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 M892_16415 77b73089c1576c2ae47513321bdc53e6 307 Gene3D G3DSA:3.30.70.250 125 197 3.0E-108 T 12-10-2018 M892_16415 77b73089c1576c2ae47513321bdc53e6 307 Pfam PF00698 Acyl transferase domain 7 291 2.3E-38 T 12-10-2018 IPR014043 Acyl transferase M892_17025 dbd89b92e72de6119fe5d00790585345 133 Gene3D G3DSA:3.30.300.250 18 129 1.4E-40 T 12-10-2018 M892_17025 dbd89b92e72de6119fe5d00790585345 133 PIRSF PIRSF007010 1 130 2.2E-53 T 12-10-2018 IPR016502 Type II secretion system (T2SS) pilotin, S protein M892_17025 dbd89b92e72de6119fe5d00790585345 133 Pfam PF16549 Type II secretion system (T2SS) pilotin, S protein 14 127 8.7E-49 T 12-10-2018 IPR016502 Type II secretion system (T2SS) pilotin, S protein M892_08435 504103413ea44ef387e8c1b8d048fdc1 122 SUPERFAMILY SSF52980 7 112 1.39E-22 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 M892_08435 504103413ea44ef387e8c1b8d048fdc1 122 Gene3D G3DSA:3.40.1350.10 13 122 2.2E-32 T 12-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 M892_08435 504103413ea44ef387e8c1b8d048fdc1 122 Hamap MF_00048 UPF0102 protein YraN [yraN]. 6 118 24.398 T 12-10-2018 IPR003509 Uncharacterised protein family UPF0102 M892_08435 504103413ea44ef387e8c1b8d048fdc1 122 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 7 120 5.2E-36 T 12-10-2018 IPR003509 Uncharacterised protein family UPF0102 M892_08435 504103413ea44ef387e8c1b8d048fdc1 122 Pfam PF02021 Uncharacterised protein family UPF0102 13 105 2.0E-28 T 12-10-2018 IPR003509 Uncharacterised protein family UPF0102 M892_24380 4e9c81905f27f8fa2b4ee92661bcc22c 480 SUPERFAMILY SSF53850 41 260 9.78E-32 T 12-10-2018 M892_24380 4e9c81905f27f8fa2b4ee92661bcc22c 480 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 41 259 7.0E-25 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M892_24380 4e9c81905f27f8fa2b4ee92661bcc22c 480 SUPERFAMILY SSF55073 315 464 5.41E-39 T 12-10-2018 IPR029787 Nucleotide cyclase M892_24380 4e9c81905f27f8fa2b4ee92661bcc22c 480 SMART SM00267 299 465 2.4E-49 T 12-10-2018 IPR000160 GGDEF domain M892_24380 4e9c81905f27f8fa2b4ee92661bcc22c 480 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 309 463 1.1E-33 T 12-10-2018 IPR000160 GGDEF domain M892_24380 4e9c81905f27f8fa2b4ee92661bcc22c 480 Gene3D G3DSA:3.40.190.10 125 221 9.3E-32 T 12-10-2018 M892_24380 4e9c81905f27f8fa2b4ee92661bcc22c 480 Pfam PF00990 Diguanylate cyclase, GGDEF domain 311 461 1.5E-35 T 12-10-2018 IPR000160 GGDEF domain M892_24380 4e9c81905f27f8fa2b4ee92661bcc22c 480 Gene3D G3DSA:3.40.190.10 37 258 9.3E-32 T 12-10-2018 M892_24380 4e9c81905f27f8fa2b4ee92661bcc22c 480 Gene3D G3DSA:3.30.70.270 299 466 6.7E-45 T 12-10-2018 M892_24380 4e9c81905f27f8fa2b4ee92661bcc22c 480 SMART SM00062 40 262 9.4E-7 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M892_13325 609f9e4fda48282541849657fe5bf1cc 231 Pfam PF04402 Protein of unknown function (DUF541) 30 228 4.0E-40 T 12-10-2018 IPR007497 Protein of unknown function DUF541 M892_13325 609f9e4fda48282541849657fe5bf1cc 231 Gene3D G3DSA:3.30.70.2970 42 149 1.7E-48 T 12-10-2018 M892_13325 609f9e4fda48282541849657fe5bf1cc 231 Gene3D G3DSA:3.30.110.170 32 228 1.7E-48 T 12-10-2018 M892_22090 f57c4909e5aba61a4aae62f1ccf0c774 404 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 5 378 2.3E-155 T 12-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 M892_22090 f57c4909e5aba61a4aae62f1ccf0c774 404 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 194 204 - T 12-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 M892_22090 f57c4909e5aba61a4aae62f1ccf0c774 404 SUPERFAMILY SSF53448 4 358 2.58E-80 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M892_22090 f57c4909e5aba61a4aae62f1ccf0c774 404 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 1 404 50.218 T 12-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 M892_22090 f57c4909e5aba61a4aae62f1ccf0c774 404 SUPERFAMILY SSF51161 312 396 3.98E-17 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily M892_22090 f57c4909e5aba61a4aae62f1ccf0c774 404 Pfam PF00483 Nucleotidyl transferase 6 272 1.6E-70 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 M892_22090 f57c4909e5aba61a4aae62f1ccf0c774 404 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 10 29 - T 12-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 M892_22090 f57c4909e5aba61a4aae62f1ccf0c774 404 Gene3D G3DSA:3.90.550.10 1 281 4.0E-93 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M892_22090 f57c4909e5aba61a4aae62f1ccf0c774 404 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 96 104 - T 12-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 M892_22090 f57c4909e5aba61a4aae62f1ccf0c774 404 Gene3D G3DSA:2.160.10.10 282 402 1.0E-32 T 12-10-2018 M892_22670 482d63867a473371c5b4a9ba37936413 206 SUPERFAMILY SSF46565 111 205 4.97E-14 T 12-10-2018 IPR036869 Chaperone J-domain superfamily M892_22670 482d63867a473371c5b4a9ba37936413 206 SMART SM00271 153 206 1.1E-8 T 12-10-2018 IPR001623 DnaJ domain M892_22670 482d63867a473371c5b4a9ba37936413 206 Pfam PF12339 DNA-J related protein 17 138 1.2E-42 T 12-10-2018 IPR021059 DnaJ-related protein, N-terminal M892_22670 482d63867a473371c5b4a9ba37936413 206 Gene3D G3DSA:1.10.287.110 148 206 1.4E-12 T 12-10-2018 IPR036869 Chaperone J-domain superfamily M892_22670 482d63867a473371c5b4a9ba37936413 206 Pfam PF00226 DnaJ domain 159 205 3.5E-11 T 12-10-2018 IPR001623 DnaJ domain M892_05085 85d3ce7bebfa0c2f02a532a0e5493355 147 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 144 1.2E-25 T 12-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 M892_05085 85d3ce7bebfa0c2f02a532a0e5493355 147 Gene3D G3DSA:3.30.420.270 63 136 1.9E-16 T 12-10-2018 M892_05085 85d3ce7bebfa0c2f02a532a0e5493355 147 Hamap MF_02203 Tol-Pal system protein TolR [tolR]. 5 144 28.175 T 12-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 M892_12385 c7f5bbf23116d02fffa9d762d23ce61e 802 Gene3D G3DSA:3.40.50.720 451 798 1.2E-102 T 12-10-2018 M892_12385 c7f5bbf23116d02fffa9d762d23ce61e 802 Gene3D G3DSA:1.20.120.1320 44 137 1.7E-73 T 12-10-2018 M892_12385 c7f5bbf23116d02fffa9d762d23ce61e 802 Pfam PF00742 Homoserine dehydrogenase 600 795 6.4E-43 T 12-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 M892_12385 c7f5bbf23116d02fffa9d762d23ce61e 802 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 457 592 7.3E-15 T 12-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 M892_12385 c7f5bbf23116d02fffa9d762d23ce61e 802 SUPERFAMILY SSF53633 5 291 2.62E-56 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily M892_12385 c7f5bbf23116d02fffa9d762d23ce61e 802 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 646 668 - T 12-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 M892_12385 c7f5bbf23116d02fffa9d762d23ce61e 802 PIRSF PIRSF000727 5 802 1.2E-289 T 12-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 M892_12385 c7f5bbf23116d02fffa9d762d23ce61e 802 Gene3D G3DSA:3.30.70.260 366 380 5.6E-6 T 12-10-2018 M892_12385 c7f5bbf23116d02fffa9d762d23ce61e 802 SUPERFAMILY SSF51735 448 622 3.03E-35 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_12385 c7f5bbf23116d02fffa9d762d23ce61e 802 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 8 445 1.5E-66 T 12-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 M892_12385 c7f5bbf23116d02fffa9d762d23ce61e 802 Pfam PF00696 Amino acid kinase family 5 273 5.2E-43 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 M892_12385 c7f5bbf23116d02fffa9d762d23ce61e 802 Gene3D G3DSA:3.30.360.10 611 781 1.2E-102 T 12-10-2018 M892_12385 c7f5bbf23116d02fffa9d762d23ce61e 802 ProSitePatterns PS00324 Aspartokinase signature. 7 15 - T 12-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 M892_12385 c7f5bbf23116d02fffa9d762d23ce61e 802 Gene3D G3DSA:3.30.70.260 381 443 5.6E-6 T 12-10-2018 M892_12385 c7f5bbf23116d02fffa9d762d23ce61e 802 SUPERFAMILY SSF55347 600 783 2.16E-44 T 12-10-2018 M892_12385 c7f5bbf23116d02fffa9d762d23ce61e 802 Gene3D G3DSA:3.40.1160.10 8 290 1.7E-73 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily M892_25275 e7f52c83005b68be8c250293ade8c412 177 Pfam PF10531 SLBB domain 105 155 1.7E-15 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M892_25275 e7f52c83005b68be8c250293ade8c412 177 Pfam PF02563 Polysaccharide biosynthesis/export protein 23 99 1.3E-17 T 12-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 M892_25275 e7f52c83005b68be8c250293ade8c412 177 SUPERFAMILY SSF142984 103 139 8.37E-5 T 12-10-2018 M892_25275 e7f52c83005b68be8c250293ade8c412 177 Gene3D G3DSA:3.10.560.10 23 166 1.6E-22 T 12-10-2018 M892_25275 e7f52c83005b68be8c250293ade8c412 177 Gene3D G3DSA:3.30.1950.10 31 103 1.6E-22 T 12-10-2018 M892_06950 fb2e6f18bf3702f5a6f0140ad78a7484 344 SUPERFAMILY SSF52540 1 238 1.35E-82 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_06950 fb2e6f18bf3702f5a6f0140ad78a7484 344 Gene3D G3DSA:3.40.50.300 1 232 3.1E-74 T 12-10-2018 M892_06950 fb2e6f18bf3702f5a6f0140ad78a7484 344 Pfam PF00005 ABC transporter 21 169 1.3E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_06950 fb2e6f18bf3702f5a6f0140ad78a7484 344 Pfam PF09383 NIL domain 268 339 2.5E-21 T 12-10-2018 IPR018449 NIL domain M892_06950 fb2e6f18bf3702f5a6f0140ad78a7484 344 TIGRFAM TIGR02314 ABC_MetN: D-methionine ABC transporter, ATP-binding protein 1 343 4.3E-195 T 12-10-2018 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria GO:0005524|GO:0009276|GO:0048473|GO:0048474 M892_06950 fb2e6f18bf3702f5a6f0140ad78a7484 344 SUPERFAMILY SSF55021 248 343 2.63E-26 T 12-10-2018 M892_06950 fb2e6f18bf3702f5a6f0140ad78a7484 344 SMART SM00930 265 340 1.2E-28 T 12-10-2018 IPR018449 NIL domain M892_06950 fb2e6f18bf3702f5a6f0140ad78a7484 344 Gene3D G3DSA:3.30.70.260 244 344 1.4E-40 T 12-10-2018 M892_06950 fb2e6f18bf3702f5a6f0140ad78a7484 344 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_06950 fb2e6f18bf3702f5a6f0140ad78a7484 344 SMART SM00382 30 235 1.9E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_26930 4abb35e0c0065ff732b774a937715317 436 Gene3D G3DSA:1.20.1740.10 1 435 1.2E-61 T 12-10-2018 M892_26930 4abb35e0c0065ff732b774a937715317 436 Hamap MF_02073 Putrescine transporter PotE [potE]. 8 435 34.578 T 12-10-2018 IPR027566 Putrescine transporter PotE GO:0015496|GO:0015822|GO:0015847 M892_26930 4abb35e0c0065ff732b774a937715317 436 TIGRFAM TIGR04299 antiport_PotE: putrescine-ornithine antiporter 4 431 2.3E-204 T 12-10-2018 IPR027566 Putrescine transporter PotE GO:0015496|GO:0015822|GO:0015847 M892_26930 4abb35e0c0065ff732b774a937715317 436 Pfam PF13520 Amino acid permease 9 414 2.9E-47 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 M892_26930 4abb35e0c0065ff732b774a937715317 436 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 1 430 6.2E-126 T 12-10-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 M892_26930 4abb35e0c0065ff732b774a937715317 436 PIRSF PIRSF006060 1 432 1.4E-52 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 M892_01130 eaa8ca0ab0d6ba912d0cfb522d38278e 457 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 205 223 7.6E-23 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 M892_01130 eaa8ca0ab0d6ba912d0cfb522d38278e 457 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 29 40 7.6E-23 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 M892_01130 eaa8ca0ab0d6ba912d0cfb522d38278e 457 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 236 257 7.6E-23 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 M892_01130 eaa8ca0ab0d6ba912d0cfb522d38278e 457 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 65 74 7.6E-23 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 M892_01130 eaa8ca0ab0d6ba912d0cfb522d38278e 457 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 19 327 2.1E-90 T 12-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 M892_01130 eaa8ca0ab0d6ba912d0cfb522d38278e 457 Gene3D G3DSA:1.20.120.640 320 456 1.9E-17 T 12-10-2018 M892_01130 eaa8ca0ab0d6ba912d0cfb522d38278e 457 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 6 456 31.992 T 12-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 M892_01130 eaa8ca0ab0d6ba912d0cfb522d38278e 457 Gene3D G3DSA:3.40.50.620 5 319 1.8E-121 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M892_01130 eaa8ca0ab0d6ba912d0cfb522d38278e 457 SUPERFAMILY SSF52374 7 326 2.65E-73 T 12-10-2018 M892_01130 eaa8ca0ab0d6ba912d0cfb522d38278e 457 SUPERFAMILY SSF47323 345 454 3.79E-18 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 M892_01130 eaa8ca0ab0d6ba912d0cfb522d38278e 457 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 6 455 2.2E-120 T 12-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 M892_07785 7b55bd689fbbec647184aa7e83ad8562 466 Pfam PF01136 Peptidase family U32 80 355 1.0E-96 T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 M892_07785 7b55bd689fbbec647184aa7e83ad8562 466 Gene3D G3DSA:2.40.30.10 367 453 7.7E-9 T 12-10-2018 M892_07785 7b55bd689fbbec647184aa7e83ad8562 466 Pfam PF16325 Peptidase family U32 C-terminal domain 372 452 1.8E-21 T 12-10-2018 IPR032525 Peptidase family U32, C-terminal M892_07785 7b55bd689fbbec647184aa7e83ad8562 466 ProSitePatterns PS01276 Peptidase family U32 signature. 167 185 - T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 M892_16425 dae02ea0c2d3fe185e3522afe4186eaa 77 SUPERFAMILY SSF47336 2 76 1.2E-23 T 12-10-2018 IPR036736 ACP-like superfamily M892_16425 dae02ea0c2d3fe185e3522afe4186eaa 77 Pfam PF00550 Phosphopantetheine attachment site 6 73 2.2E-16 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain M892_16425 dae02ea0c2d3fe185e3522afe4186eaa 77 Gene3D G3DSA:1.10.1200.10 1 76 1.9E-30 T 12-10-2018 IPR036736 ACP-like superfamily M892_16425 dae02ea0c2d3fe185e3522afe4186eaa 77 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 76 6.6E-37 T 12-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 M892_16425 dae02ea0c2d3fe185e3522afe4186eaa 77 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site M892_16425 dae02ea0c2d3fe185e3522afe4186eaa 77 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.938 T 12-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 M892_00665 c4dbacde780927a4eb52326de8a9eec4 187 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 23 151 3.2E-26 T 12-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ M892_16695 2c8f4ff44796f93c2104a41de9713911 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 9.5E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_16695 2c8f4ff44796f93c2104a41de9713911 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 9.5E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_16695 2c8f4ff44796f93c2104a41de9713911 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 9.5E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_16695 2c8f4ff44796f93c2104a41de9713911 301 Gene3D G3DSA:3.40.190.290 95 294 2.9E-58 T 12-10-2018 M892_16695 2c8f4ff44796f93c2104a41de9713911 301 SUPERFAMILY SSF46785 6 87 1.13E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_16695 2c8f4ff44796f93c2104a41de9713911 301 Gene3D G3DSA:1.10.10.10 5 94 1.4E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_16695 2c8f4ff44796f93c2104a41de9713911 301 SUPERFAMILY SSF53850 90 298 5.57E-41 T 12-10-2018 M892_16695 2c8f4ff44796f93c2104a41de9713911 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 1.8E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_16695 2c8f4ff44796f93c2104a41de9713911 301 Pfam PF03466 LysR substrate binding domain 91 295 1.9E-37 T 12-10-2018 IPR005119 LysR, substrate-binding M892_27730 0d61bbb3df3d266fb4ee7803437c5e2f 284 Pfam PF00005 ABC transporter 36 191 5.9E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_27730 0d61bbb3df3d266fb4ee7803437c5e2f 284 SUPERFAMILY SSF52540 15 263 3.75E-68 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_27730 0d61bbb3df3d266fb4ee7803437c5e2f 284 Gene3D G3DSA:3.40.50.300 13 283 2.8E-85 T 12-10-2018 M892_27730 0d61bbb3df3d266fb4ee7803437c5e2f 284 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_27730 0d61bbb3df3d266fb4ee7803437c5e2f 284 SMART SM00382 44 250 4.8E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_17920 427a6ff11fd12c67212dcbd0dbe2f9f8 394 Pfam PF00990 Diguanylate cyclase, GGDEF domain 191 358 1.4E-39 T 12-10-2018 IPR000160 GGDEF domain M892_17920 427a6ff11fd12c67212dcbd0dbe2f9f8 394 SMART SM00267 180 362 1.7E-48 T 12-10-2018 IPR000160 GGDEF domain M892_17920 427a6ff11fd12c67212dcbd0dbe2f9f8 394 SUPERFAMILY SSF55073 196 363 1.33E-40 T 12-10-2018 IPR029787 Nucleotide cyclase M892_17920 427a6ff11fd12c67212dcbd0dbe2f9f8 394 Gene3D G3DSA:3.30.70.270 186 378 1.0E-50 T 12-10-2018 M892_17920 427a6ff11fd12c67212dcbd0dbe2f9f8 394 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 187 361 4.8E-41 T 12-10-2018 IPR000160 GGDEF domain M892_05575 053a2c64a73f14b5baac498ae48d9c17 561 TIGRFAM TIGR04456 LruC_dom: LruC domain 318 552 2.3E-72 T 12-10-2018 IPR031025 LruC domain M892_05575 053a2c64a73f14b5baac498ae48d9c17 561 Pfam PF16130 Domain of unknown function (DUF4842) 350 552 5.2E-49 T 12-10-2018 IPR032295 Domain of unknown function DUF4842 M892_10970 03f7e835e2bb012242b11466f9f53c0c 724 Gene3D G3DSA:1.10.10.160 115 188 1.2E-97 T 12-10-2018 IPR013986 DExx box DNA helicase domain superfamily M892_10970 03f7e835e2bb012242b11466f9f53c0c 724 SUPERFAMILY SSF52540 8 643 2.82E-180 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_10970 03f7e835e2bb012242b11466f9f53c0c 724 TIGRFAM TIGR01075 uvrD: DNA helicase II 7 722 0.0 T 12-10-2018 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 M892_10970 03f7e835e2bb012242b11466f9f53c0c 724 Pfam PF00580 UvrD/REP helicase N-terminal domain 11 272 4.5E-74 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 M892_10970 03f7e835e2bb012242b11466f9f53c0c 724 Gene3D G3DSA:3.40.50.300 282 637 9.5E-132 T 12-10-2018 M892_10970 03f7e835e2bb012242b11466f9f53c0c 724 Gene3D G3DSA:3.40.50.300 11 274 1.2E-97 T 12-10-2018 M892_10970 03f7e835e2bb012242b11466f9f53c0c 724 Pfam PF13361 UvrD-like helicase C-terminal domain 278 617 2.0E-78 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 M892_10970 03f7e835e2bb012242b11466f9f53c0c 724 Gene3D G3DSA:1.10.486.10 383 539 9.5E-132 T 12-10-2018 M892_15525 e2be44e6aee019de69361da180b3c8ea 403 SUPERFAMILY SSF53901 1 251 1.7E-67 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M892_15525 e2be44e6aee019de69361da180b3c8ea 403 Gene3D G3DSA:3.40.47.10 258 401 1.5E-49 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M892_15525 e2be44e6aee019de69361da180b3c8ea 403 SMART SM00825 Beta-ketoacyl synthase 4 403 2.7E-14 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain M892_15525 e2be44e6aee019de69361da180b3c8ea 403 SUPERFAMILY SSF53901 213 401 6.69E-62 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M892_15525 e2be44e6aee019de69361da180b3c8ea 403 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 358 3.0E-27 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal M892_15525 e2be44e6aee019de69361da180b3c8ea 403 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 244 4.2E-45 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal M892_15525 e2be44e6aee019de69361da180b3c8ea 403 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 152 168 - T 12-10-2018 IPR018201 Beta-ketoacyl synthase, active site M892_15525 e2be44e6aee019de69361da180b3c8ea 403 Gene3D G3DSA:3.40.47.10 1 253 3.3E-69 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M892_27890 d8c59fca9e5ad811c59c7af92b9b4afc 285 Gene3D G3DSA:3.40.50.300 2 247 4.7E-45 T 12-10-2018 M892_27890 d8c59fca9e5ad811c59c7af92b9b4afc 285 SUPERFAMILY SSF52540 4 222 1.07E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_27890 d8c59fca9e5ad811c59c7af92b9b4afc 285 Pfam PF00005 ABC transporter 21 158 6.6E-25 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_27890 d8c59fca9e5ad811c59c7af92b9b4afc 285 SMART SM00382 30 208 4.9E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_12920 c2c5c524737d782c1ae281d0454153e2 212 PIRSF PIRSF004649 1 212 1.7E-55 T 12-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC M892_12920 c2c5c524737d782c1ae281d0454153e2 212 Pfam PF05494 MlaC protein 34 200 1.1E-44 T 12-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC M892_12920 c2c5c524737d782c1ae281d0454153e2 212 Gene3D G3DSA:3.10.450.710 25 204 2.4E-37 T 12-10-2018 M892_24495 43b3523c0f9e370d43342d7619d0bba7 152 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 33 146 1.0E-46 T 12-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB M892_24495 43b3523c0f9e370d43342d7619d0bba7 152 PIRSF PIRSF006105 2 152 9.8E-46 T 12-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB M892_24495 43b3523c0f9e370d43342d7619d0bba7 152 Gene3D G3DSA:1.10.1130.10 66 133 2.6E-28 T 12-10-2018 M892_24495 43b3523c0f9e370d43342d7619d0bba7 152 SUPERFAMILY SSF48695 36 149 4.77E-40 T 12-10-2018 IPR036280 Multiheme cytochrome superfamily M892_01730 129de5dfc4b0bc4e3e7a7503b29ddba5 149 Gene3D G3DSA:1.10.1220.10 98 149 3.1E-23 T 12-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 M892_01730 129de5dfc4b0bc4e3e7a7503b29ddba5 149 Pfam PF06303 MatP N-terminal domain 2 85 3.2E-42 T 12-10-2018 IPR035087 MatP, N-terminal M892_01730 129de5dfc4b0bc4e3e7a7503b29ddba5 149 ProDom PD033720 UPF0268 YCBG DEHYDROGENASE PM0482 PBPRA1775 PLU1774 YPO1433/Y2737/YP0877 VV1664 HI1323 HD0178 1 133 1.0E-68 T 12-10-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 M892_01730 129de5dfc4b0bc4e3e7a7503b29ddba5 149 Pfam PF17414 MatP C-terminal ribbon-helix-helix domain 88 147 1.0E-26 T 12-10-2018 IPR035375 MatP, C-terminal ribbon-helix-helix domain M892_01730 129de5dfc4b0bc4e3e7a7503b29ddba5 149 Gene3D G3DSA:1.20.1270.380 1 89 2.1E-48 T 12-10-2018 IPR038339 MatP, N-terminal domain superfamily M892_01730 129de5dfc4b0bc4e3e7a7503b29ddba5 149 Hamap MF_01073 Macrodomain Ter protein [matP]. 1 148 30.438 T 12-10-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 M892_06135 2a8409791dd0a6a80e1db0ad9648ecc2 382 Gene3D G3DSA:1.10.150.80 206 303 3.7E-16 T 12-10-2018 M892_06135 2a8409791dd0a6a80e1db0ad9648ecc2 382 SUPERFAMILY SSF47819 204 311 5.01E-22 T 12-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 M892_06135 2a8409791dd0a6a80e1db0ad9648ecc2 382 SMART SM00474 13 181 6.6E-46 T 12-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 M892_06135 2a8409791dd0a6a80e1db0ad9648ecc2 382 Hamap MF_01899 Ribonuclease D [rnd]. 13 382 43.68 T 12-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 M892_06135 2a8409791dd0a6a80e1db0ad9648ecc2 382 SUPERFAMILY SSF53098 7 220 1.58E-71 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_06135 2a8409791dd0a6a80e1db0ad9648ecc2 382 SUPERFAMILY SSF47819 306 382 4.84E-21 T 12-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 M892_06135 2a8409791dd0a6a80e1db0ad9648ecc2 382 Pfam PF00570 HRDC domain 223 289 1.2E-7 T 12-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 M892_06135 2a8409791dd0a6a80e1db0ad9648ecc2 382 Gene3D G3DSA:1.10.150.80 304 382 6.6E-28 T 12-10-2018 M892_06135 2a8409791dd0a6a80e1db0ad9648ecc2 382 Pfam PF01612 3'-5' exonuclease 13 180 2.4E-41 T 12-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 M892_06135 2a8409791dd0a6a80e1db0ad9648ecc2 382 Gene3D G3DSA:3.30.420.10 11 204 6.8E-69 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M892_06135 2a8409791dd0a6a80e1db0ad9648ecc2 382 TIGRFAM TIGR01388 rnd: ribonuclease D 15 380 1.4E-146 T 12-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 M892_06315 2491c9035fad0a98783a59eec585c3c4 177 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 12-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 M892_06315 2491c9035fad0a98783a59eec585c3c4 177 Pfam PF00258 Flavodoxin 6 162 1.6E-32 T 12-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 M892_06315 2491c9035fad0a98783a59eec585c3c4 177 SUPERFAMILY SSF52218 4 172 9.63E-50 T 12-10-2018 IPR029039 Flavoprotein-like superfamily M892_06315 2491c9035fad0a98783a59eec585c3c4 177 PIRSF PIRSF038996 1 174 1.2E-65 T 12-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 M892_06315 2491c9035fad0a98783a59eec585c3c4 177 TIGRFAM TIGR01752 flav_long: flavodoxin 4 170 5.1E-70 T 12-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 M892_06315 2491c9035fad0a98783a59eec585c3c4 177 Gene3D G3DSA:3.40.50.360 3 176 3.2E-54 T 12-10-2018 IPR029039 Flavoprotein-like superfamily M892_20790 8e22dea233437fbea995fdd1ffe199ea 431 SUPERFAMILY SSF51445 19 418 1.41E-78 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily M892_20790 8e22dea233437fbea995fdd1ffe199ea 431 SMART SM00636 23 416 5.6E-102 T 12-10-2018 IPR011583 Chitinase II GO:0008061 M892_20790 8e22dea233437fbea995fdd1ffe199ea 431 Gene3D G3DSA:3.10.50.10 312 390 5.3E-118 T 12-10-2018 IPR029070 Chitinase insertion domain superfamily M892_20790 8e22dea233437fbea995fdd1ffe199ea 431 Gene3D G3DSA:3.20.20.80 23 422 5.3E-118 T 12-10-2018 M892_20790 8e22dea233437fbea995fdd1ffe199ea 431 Pfam PF00704 Glycosyl hydrolases family 18 25 416 7.4E-79 T 12-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 M892_20790 8e22dea233437fbea995fdd1ffe199ea 431 ProSitePatterns PS01095 Chitinases family 18 active site. 169 177 - T 12-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 M892_20790 8e22dea233437fbea995fdd1ffe199ea 431 SUPERFAMILY SSF54556 313 387 2.29E-17 T 12-10-2018 IPR029070 Chitinase insertion domain superfamily M892_11080 9a2e6354b539463ad934ab3193213e7a 117 Gene3D G3DSA:3.30.420.470 5 111 1.9E-13 T 12-10-2018 M892_11080 9a2e6354b539463ad934ab3193213e7a 117 Pfam PF13358 DDE superfamily endonuclease 5 85 2.6E-18 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_06945 bc7cc68de46131af763f69f60bf2e1a1 183 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 5 154 5.7E-36 T 12-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 M892_06945 bc7cc68de46131af763f69f60bf2e1a1 183 Gene3D G3DSA:3.40.50.1000 2 183 1.5E-62 T 12-10-2018 IPR023214 HAD superfamily M892_06945 bc7cc68de46131af763f69f60bf2e1a1 183 PIRSF PIRSF004682 1 183 5.0E-64 T 12-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 M892_06945 bc7cc68de46131af763f69f60bf2e1a1 183 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 4 178 9.8E-82 T 12-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 M892_06945 bc7cc68de46131af763f69f60bf2e1a1 183 Pfam PF13242 HAD-hyrolase-like 107 176 6.7E-13 T 12-10-2018 M892_06945 bc7cc68de46131af763f69f60bf2e1a1 183 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 4 152 7.4E-39 T 12-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 M892_06945 bc7cc68de46131af763f69f60bf2e1a1 183 SUPERFAMILY SSF56784 4 181 1.32E-49 T 12-10-2018 IPR036412 HAD-like superfamily M892_19320 10773d510f389736e4bae818b40c2716 139 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 125 4.1E-18 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain M892_19320 10773d510f389736e4bae818b40c2716 139 SUPERFAMILY SSF54593 3 129 7.38E-29 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M892_19320 10773d510f389736e4bae818b40c2716 139 Gene3D G3DSA:3.10.180.10 2 131 3.5E-34 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M892_21750 f4f96416848149e63e61f282a037e548 586 SUPERFAMILY SSF52540 334 582 2.57E-92 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_21750 f4f96416848149e63e61f282a037e548 586 Pfam PF00664 ABC transporter transmembrane region 29 291 5.5E-49 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 M892_21750 f4f96416848149e63e61f282a037e548 586 SMART SM00382 371 572 1.1E-18 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_21750 f4f96416848149e63e61f282a037e548 586 Pfam PF00005 ABC transporter 363 511 3.6E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_21750 f4f96416848149e63e61f282a037e548 586 SUPERFAMILY SSF90123 14 326 1.83E-74 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 M892_21750 f4f96416848149e63e61f282a037e548 586 Gene3D G3DSA:1.20.1560.10 9 333 4.7E-84 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 M892_21750 f4f96416848149e63e61f282a037e548 586 ProSitePatterns PS00211 ABC transporters family signature. 483 497 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_21750 f4f96416848149e63e61f282a037e548 586 Gene3D G3DSA:3.40.50.300 336 585 1.1E-93 T 12-10-2018 M892_21750 f4f96416848149e63e61f282a037e548 586 TIGRFAM TIGR02204 MsbA_rel: ABC transporter, permease/ATP-binding protein 7 582 4.0E-282 T 12-10-2018 IPR011918 ABC transporter, ATP-binding/permease protein M892_02855 b36ee8460507e2e1e6ec804ec40a114e 94 SUPERFAMILY SSF101386 1 93 5.4E-21 T 12-10-2018 M892_02855 b36ee8460507e2e1e6ec804ec40a114e 94 Gene3D G3DSA:1.10.287.1080 1 94 2.2E-28 T 12-10-2018 M892_02855 b36ee8460507e2e1e6ec804ec40a114e 94 PIRSF PIRSF036521 1 94 3.7E-8 T 12-10-2018 IPR011411 NTP Pyrophosphohydrolase MazG-related M892_02855 b36ee8460507e2e1e6ec804ec40a114e 94 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 20 81 4.5E-10 T 12-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core M892_00770 47d60c216a3a33e30c7b95974f6dbbaa 200 SMART SM00702 11 187 1.4E-33 T 12-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 M892_00770 47d60c216a3a33e30c7b95974f6dbbaa 200 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 97 187 2.4E-21 T 12-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 M892_00770 47d60c216a3a33e30c7b95974f6dbbaa 200 Gene3D G3DSA:2.60.120.620 1 189 3.5E-52 T 12-10-2018 M892_04025 caa52f780b439e8e1df20137b58bac68 298 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 6 196 4.6E-54 T 12-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 M892_04025 caa52f780b439e8e1df20137b58bac68 298 Gene3D G3DSA:3.40.190.10 102 191 1.5E-67 T 12-10-2018 M892_04025 caa52f780b439e8e1df20137b58bac68 298 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 204 297 2.3E-30 T 12-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 M892_04025 caa52f780b439e8e1df20137b58bac68 298 Pfam PF01634 ATP phosphoribosyltransferase 53 218 1.7E-43 T 12-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 M892_04025 caa52f780b439e8e1df20137b58bac68 298 SUPERFAMILY SSF54913 225 297 2.78E-21 T 12-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta M892_04025 caa52f780b439e8e1df20137b58bac68 298 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 155 176 - T 12-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 M892_04025 caa52f780b439e8e1df20137b58bac68 298 Gene3D G3DSA:3.30.70.120 225 298 6.0E-34 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal M892_04025 caa52f780b439e8e1df20137b58bac68 298 Gene3D G3DSA:3.40.190.10 6 219 1.5E-67 T 12-10-2018 M892_04025 caa52f780b439e8e1df20137b58bac68 298 SUPERFAMILY SSF53850 5 222 4.34E-66 T 12-10-2018 M892_04025 caa52f780b439e8e1df20137b58bac68 298 Pfam PF08029 HisG, C-terminal domain 222 295 2.0E-24 T 12-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 M892_04025 caa52f780b439e8e1df20137b58bac68 298 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 5 298 35.162 T 12-10-2018 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 M892_21625 4488b266c5a81d0093d0ea763985a793 329 SUPERFAMILY SSF56059 131 319 1.1E-17 T 12-10-2018 M892_21625 4488b266c5a81d0093d0ea763985a793 329 Gene3D G3DSA:3.30.470.20 140 327 1.1E-17 T 12-10-2018 M892_04310 c28f03f317682657a0df7ca6f69229bc 470 SMART SM00062 32 269 2.9E-7 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M892_04310 c28f03f317682657a0df7ca6f69229bc 470 SUPERFAMILY SSF53850 28 252 3.44E-27 T 12-10-2018 M892_04310 c28f03f317682657a0df7ca6f69229bc 470 SUPERFAMILY SSF53955 286 447 4.5E-34 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily M892_04310 c28f03f317682657a0df7ca6f69229bc 470 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 43 251 4.9E-20 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M892_04310 c28f03f317682657a0df7ca6f69229bc 470 Gene3D G3DSA:1.10.530.10 284 453 1.2E-33 T 12-10-2018 M892_04310 c28f03f317682657a0df7ca6f69229bc 470 Pfam PF01464 Transglycosylase SLT domain 296 404 2.5E-17 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 M892_04310 c28f03f317682657a0df7ca6f69229bc 470 Gene3D G3DSA:3.40.190.10 121 225 1.2E-39 T 12-10-2018 M892_04310 c28f03f317682657a0df7ca6f69229bc 470 Gene3D G3DSA:3.40.190.10 28 256 1.2E-39 T 12-10-2018 M892_01250 450c655234a1e3fbe5cc2406a9e1254b 326 Pfam PF13533 Biotin-lipoyl like 47 91 1.6E-12 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain M892_01250 450c655234a1e3fbe5cc2406a9e1254b 326 Gene3D G3DSA:1.10.287.470 79 107 6.6E-11 T 12-10-2018 M892_01250 450c655234a1e3fbe5cc2406a9e1254b 326 Gene3D G3DSA:1.10.287.470 109 193 9.3E-20 T 12-10-2018 M892_01250 450c655234a1e3fbe5cc2406a9e1254b 326 Pfam PF13437 HlyD family secretion protein 208 312 3.2E-6 T 12-10-2018 M892_01250 450c655234a1e3fbe5cc2406a9e1254b 326 Gene3D G3DSA:2.40.50.100 194 238 9.3E-20 T 12-10-2018 M892_01250 450c655234a1e3fbe5cc2406a9e1254b 326 SUPERFAMILY SSF111369 44 275 1.12E-8 T 12-10-2018 M892_01250 450c655234a1e3fbe5cc2406a9e1254b 326 Gene3D G3DSA:2.40.30.170 239 322 9.3E-20 T 12-10-2018 M892_01250 450c655234a1e3fbe5cc2406a9e1254b 326 Gene3D G3DSA:2.40.50.100 44 78 6.6E-11 T 12-10-2018 M892_16435 b44a945fd0aca790f79211297b405eab 271 Gene3D G3DSA:3.30.470.10 1 106 9.5E-26 T 12-10-2018 M892_16435 b44a945fd0aca790f79211297b405eab 271 SUPERFAMILY SSF56752 1 266 9.42E-70 T 12-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 M892_16435 b44a945fd0aca790f79211297b405eab 271 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 3 266 9.1E-107 T 12-10-2018 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 M892_16435 b44a945fd0aca790f79211297b405eab 271 ProSitePatterns PS00770 Aminotransferases class-IV signature. 173 202 - T 12-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 M892_16435 b44a945fd0aca790f79211297b405eab 271 Gene3D G3DSA:3.20.10.10 112 271 2.2E-53 T 12-10-2018 M892_16435 b44a945fd0aca790f79211297b405eab 271 Pfam PF01063 Amino-transferase class IV 24 246 2.6E-46 T 12-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 M892_20220 69d4e0b85e66f57ae8634e9608d6e3d5 293 SUPERFAMILY SSF161098 55 281 2.88E-49 T 12-10-2018 IPR035906 MetI-like superfamily M892_20220 69d4e0b85e66f57ae8634e9608d6e3d5 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 102 292 1.1E-12 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M892_20220 69d4e0b85e66f57ae8634e9608d6e3d5 293 Gene3D G3DSA:1.10.3720.10 51 292 2.5E-56 T 12-10-2018 IPR035906 MetI-like superfamily M892_11810 6aa9ed6728eb3075bc2573cb6d2413f4 105 Pfam PF13937 Domain of unknown function (DUF4212) 27 104 3.1E-34 T 12-10-2018 IPR019886 Sodium symporter small subunit, predicted M892_11810 6aa9ed6728eb3075bc2573cb6d2413f4 105 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 29 105 7.5E-36 T 12-10-2018 IPR019886 Sodium symporter small subunit, predicted M892_11920 9c4c20d5b415c95af7f409612ed783ed 340 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 16 335 2.0E-152 T 12-10-2018 IPR022462 Lysine-2,3-aminomutase-like M892_11920 9c4c20d5b415c95af7f409612ed783ed 340 PIRSF PIRSF004911 3 340 6.4E-115 T 12-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase M892_11920 9c4c20d5b415c95af7f409612ed783ed 340 TIGRFAM TIGR00238 TIGR00238: KamA family protein 11 328 4.0E-125 T 12-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase M892_11920 9c4c20d5b415c95af7f409612ed783ed 340 SUPERFAMILY SSF102114 101 324 2.75E-26 T 12-10-2018 M892_11920 9c4c20d5b415c95af7f409612ed783ed 340 Pfam PF13353 4Fe-4S single cluster domain 115 183 5.5E-7 T 12-10-2018 M892_11920 9c4c20d5b415c95af7f409612ed783ed 340 Pfam PF04055 Radical SAM superfamily 117 286 1.4E-9 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 M892_11920 9c4c20d5b415c95af7f409612ed783ed 340 Gene3D G3DSA:3.20.20.70 51 334 3.9E-89 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M892_01830 99a47bd15c1263582343739cdb388b41 122 Pfam PF12472 Phage related protein 63 119 2.7E-23 T 12-10-2018 IPR021096 Vibrio phage VSK, Orf152 M892_11455 0f457f8b468574eb006ff77fb6c4e789 446 Pfam PF13091 PLD-like domain 34 171 1.2E-7 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 M892_11455 0f457f8b468574eb006ff77fb6c4e789 446 Pfam PF13091 PLD-like domain 251 401 6.6E-24 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 M892_11455 0f457f8b468574eb006ff77fb6c4e789 446 SUPERFAMILY SSF56024 248 424 2.12E-26 T 12-10-2018 M892_11455 0f457f8b468574eb006ff77fb6c4e789 446 Gene3D G3DSA:3.30.870.10 18 225 8.8E-167 T 12-10-2018 M892_11455 0f457f8b468574eb006ff77fb6c4e789 446 SMART SM00155 126 152 5.3E-4 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 M892_11455 0f457f8b468574eb006ff77fb6c4e789 446 SMART SM00155 347 374 0.079 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 M892_11455 0f457f8b468574eb006ff77fb6c4e789 446 SUPERFAMILY SSF56024 16 182 6.54E-27 T 12-10-2018 M892_11455 0f457f8b468574eb006ff77fb6c4e789 446 Gene3D G3DSA:3.30.870.10 12 441 8.8E-167 T 12-10-2018 M892_11455 0f457f8b468574eb006ff77fb6c4e789 446 PIRSF PIRSF000850 3 446 8.5E-214 T 12-10-2018 M892_10260 d69d82bbd79b46254e86a5a828635ad1 308 Gene3D G3DSA:1.10.10.10 1 90 8.2E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_10260 d69d82bbd79b46254e86a5a828635ad1 308 Gene3D G3DSA:3.40.190.10 92 298 2.5E-16 T 12-10-2018 M892_10260 d69d82bbd79b46254e86a5a828635ad1 308 SUPERFAMILY SSF53850 90 305 7.24E-18 T 12-10-2018 M892_10260 d69d82bbd79b46254e86a5a828635ad1 308 Gene3D G3DSA:3.40.190.10 173 274 2.5E-16 T 12-10-2018 M892_10260 d69d82bbd79b46254e86a5a828635ad1 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 66 5.3E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_10260 d69d82bbd79b46254e86a5a828635ad1 308 Pfam PF03466 LysR substrate binding domain 98 268 4.4E-11 T 12-10-2018 IPR005119 LysR, substrate-binding M892_10260 d69d82bbd79b46254e86a5a828635ad1 308 SUPERFAMILY SSF46785 7 89 1.7E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_18970 62c0ba17eadea50e4cd739120a1cad78 361 Pfam PF12060 Domain of unknown function (DUF3541) 30 252 4.4E-109 T 12-10-2018 IPR021928 Protein of unknown function DUF3541 M892_16060 414fefa41d5f154d220e94b0cb390c75 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 66 84 1.2E-164 T 12-10-2018 M892_16060 414fefa41d5f154d220e94b0cb390c75 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 233 250 1.2E-164 T 12-10-2018 M892_16060 414fefa41d5f154d220e94b0cb390c75 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 148 167 1.2E-164 T 12-10-2018 M892_16060 414fefa41d5f154d220e94b0cb390c75 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 45 63 1.2E-164 T 12-10-2018 M892_16060 414fefa41d5f154d220e94b0cb390c75 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 204 230 1.2E-164 T 12-10-2018 M892_16060 414fefa41d5f154d220e94b0cb390c75 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 3 27 1.2E-164 T 12-10-2018 M892_16060 414fefa41d5f154d220e94b0cb390c75 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 28 44 1.2E-164 T 12-10-2018 M892_16060 414fefa41d5f154d220e94b0cb390c75 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 123 145 1.2E-164 T 12-10-2018 M892_16060 414fefa41d5f154d220e94b0cb390c75 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 271 291 1.2E-164 T 12-10-2018 M892_16060 414fefa41d5f154d220e94b0cb390c75 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 104 121 1.2E-164 T 12-10-2018 M892_16060 414fefa41d5f154d220e94b0cb390c75 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 85 103 1.2E-164 T 12-10-2018 M892_16060 414fefa41d5f154d220e94b0cb390c75 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 251 270 1.2E-164 T 12-10-2018 M892_16060 414fefa41d5f154d220e94b0cb390c75 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 174 201 1.2E-164 T 12-10-2018 M892_16060 414fefa41d5f154d220e94b0cb390c75 293 Gene3D G3DSA:3.30.1330.60 176 293 3.7E-38 T 12-10-2018 IPR036737 OmpA-like domain superfamily M892_16060 414fefa41d5f154d220e94b0cb390c75 293 SUPERFAMILY SSF103088 158 287 2.88E-25 T 12-10-2018 IPR036737 OmpA-like domain superfamily M892_16060 414fefa41d5f154d220e94b0cb390c75 293 Gene3D G3DSA:2.60.40.2540 22 175 1.4E-56 T 12-10-2018 M892_16060 414fefa41d5f154d220e94b0cb390c75 293 Pfam PF00691 OmpA family 187 282 3.9E-18 T 12-10-2018 IPR006665 OmpA-like domain M892_18125 46970621bce7310d013c51ed409e4e63 216 SUPERFAMILY SSF141571 5 48 9.81E-10 T 12-10-2018 M892_18125 46970621bce7310d013c51ed409e4e63 216 Pfam PF13599 Pentapeptide repeats (9 copies) 52 104 1.8E-8 T 12-10-2018 IPR001646 Pentapeptide repeat M892_18125 46970621bce7310d013c51ed409e4e63 216 Gene3D G3DSA:2.160.20.80 2 216 4.2E-60 T 12-10-2018 M892_18125 46970621bce7310d013c51ed409e4e63 216 Pfam PF00805 Pentapeptide repeats (8 copies) 14 45 6.6E-8 T 12-10-2018 IPR001646 Pentapeptide repeat M892_18125 46970621bce7310d013c51ed409e4e63 216 Pfam PF00805 Pentapeptide repeats (8 copies) 120 156 2.8E-4 T 12-10-2018 IPR001646 Pentapeptide repeat M892_18125 46970621bce7310d013c51ed409e4e63 216 SUPERFAMILY SSF141571 52 215 1.49E-36 T 12-10-2018 M892_24050 dceb77f124c1262359ad9b6ecb80403b 262 SUPERFAMILY SSF52096 5 261 6.58E-78 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily M892_24050 dceb77f124c1262359ad9b6ecb80403b 262 Gene3D G3DSA:3.90.226.10 4 262 9.4E-80 T 12-10-2018 M892_24050 dceb77f124c1262359ad9b6ecb80403b 262 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 103 123 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 M892_24050 dceb77f124c1262359ad9b6ecb80403b 262 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 262 1.7E-57 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 M892_14195 eced7a6397c8872c45a6ea4810fcdf6c 55 Pfam PF17320 Family of unknown function (DUF5363) 1 49 1.9E-9 T 12-10-2018 IPR035292 Protein of unknown function DUF5363 M892_14020 12c2e5c1fe49ce990fab1eed92a10c76 429 Gene3D G3DSA:2.70.70.10 266 395 2.6E-80 T 12-10-2018 IPR011055 Duplicated hybrid motif M892_14020 12c2e5c1fe49ce990fab1eed92a10c76 429 SUPERFAMILY SSF51261 144 390 5.23E-71 T 12-10-2018 IPR011055 Duplicated hybrid motif M892_14020 12c2e5c1fe49ce990fab1eed92a10c76 429 Gene3D G3DSA:3.10.450.350 70 158 1.4E-9 T 12-10-2018 M892_14020 12c2e5c1fe49ce990fab1eed92a10c76 429 Pfam PF08525 Opacity-associated protein A N-terminal motif 4 32 2.5E-5 T 12-10-2018 IPR013731 Opacity-associated protein A, N-terminal M892_14020 12c2e5c1fe49ce990fab1eed92a10c76 429 Gene3D G3DSA:3.10.450.350 172 409 2.6E-80 T 12-10-2018 M892_14020 12c2e5c1fe49ce990fab1eed92a10c76 429 Pfam PF01551 Peptidase family M23 295 389 8.3E-31 T 12-10-2018 IPR016047 Peptidase M23 M892_19265 84d6b7a22db2d40968f6c09900196be5 158 SUPERFAMILY SSF55729 3 154 3.06E-18 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_19265 84d6b7a22db2d40968f6c09900196be5 158 Gene3D G3DSA:3.40.630.30 8 157 1.9E-21 T 12-10-2018 M892_19265 84d6b7a22db2d40968f6c09900196be5 158 Pfam PF00583 Acetyltransferase (GNAT) family 38 136 8.4E-7 T 12-10-2018 IPR000182 GNAT domain M892_25750 5c8ac80476632641ff6f985de9ef5dd4 542 Gene3D G3DSA:1.10.287.950 213 542 7.0E-74 T 12-10-2018 M892_25750 5c8ac80476632641ff6f985de9ef5dd4 542 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 343 508 2.5E-41 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M892_25750 5c8ac80476632641ff6f985de9ef5dd4 542 SMART SM00283 280 541 5.7E-70 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M892_25750 5c8ac80476632641ff6f985de9ef5dd4 542 Pfam PF00672 HAMP domain 215 261 1.1E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M892_25750 5c8ac80476632641ff6f985de9ef5dd4 542 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 407 436 2.3E-22 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M892_25750 5c8ac80476632641ff6f985de9ef5dd4 542 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 378 405 2.3E-22 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M892_25750 5c8ac80476632641ff6f985de9ef5dd4 542 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 101 116 2.3E-22 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M892_25750 5c8ac80476632641ff6f985de9ef5dd4 542 SUPERFAMILY SSF58104 233 542 3.92E-73 T 12-10-2018 M892_25750 5c8ac80476632641ff6f985de9ef5dd4 542 SMART SM00304 213 265 1.4E-12 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M892_03510 bf12d5b9861228d3a07b963a3c850ca3 266 Gene3D G3DSA:3.30.420.10 92 258 1.4E-17 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M892_03510 bf12d5b9861228d3a07b963a3c850ca3 266 Pfam PF00665 Integrase core domain 105 216 9.7E-26 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 M892_03510 bf12d5b9861228d3a07b963a3c850ca3 266 SUPERFAMILY SSF53098 103 260 1.52E-48 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_03510 bf12d5b9861228d3a07b963a3c850ca3 266 Pfam PF13276 HTH-like domain 31 83 5.4E-12 T 12-10-2018 IPR025948 HTH-like domain M892_09450 e9e9f1f59204bca514c5bbf5572bf9e9 352 SUPERFAMILY SSF53756 2 344 5.02E-98 T 12-10-2018 M892_09450 e9e9f1f59204bca514c5bbf5572bf9e9 352 Gene3D G3DSA:3.40.50.2000 2 150 1.2E-52 T 12-10-2018 M892_09450 e9e9f1f59204bca514c5bbf5572bf9e9 352 Gene3D G3DSA:3.40.50.2000 165 347 9.9E-59 T 12-10-2018 M892_09450 e9e9f1f59204bca514c5bbf5572bf9e9 352 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 3 345 3.0E-148 T 12-10-2018 IPR011910 ADP-heptose--LPS heptosyltransferase 2 GO:0009103|GO:0016757 M892_09450 e9e9f1f59204bca514c5bbf5572bf9e9 352 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 70 326 6.2E-69 T 12-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 M892_15475 ab3aede5cb1eecdc384001120c95cdee 176 Hamap MF_01042 UPF0115 protein YfcN [yfcN]. 1 173 39.149 T 12-10-2018 IPR022990 Uncharacterised protein family UPF0115 M892_15475 ab3aede5cb1eecdc384001120c95cdee 176 SMART SM00463 94 172 1.5E-15 T 12-10-2018 IPR002625 Smr domain M892_15475 ab3aede5cb1eecdc384001120c95cdee 176 Pfam PF01713 Smr domain 97 171 2.0E-17 T 12-10-2018 IPR002625 Smr domain M892_15475 ab3aede5cb1eecdc384001120c95cdee 176 Gene3D G3DSA:3.30.1370.110 49 175 1.5E-27 T 12-10-2018 M892_15475 ab3aede5cb1eecdc384001120c95cdee 176 SUPERFAMILY SSF160443 95 171 2.48E-11 T 12-10-2018 IPR036063 Smr domain superfamily M892_07510 27a5f32ff332deb63925e5da3145a57f 430 Pfam PF08388 Group II intron, maturase-specific domain 288 356 5.4E-15 T 12-10-2018 IPR013597 Group II intron, maturase-specific M892_07510 27a5f32ff332deb63925e5da3145a57f 430 SUPERFAMILY SSF56672 15 352 6.67E-51 T 12-10-2018 M892_07510 27a5f32ff332deb63925e5da3145a57f 430 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 61 74 3.0E-6 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M892_07510 27a5f32ff332deb63925e5da3145a57f 430 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 187 200 3.0E-6 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M892_07510 27a5f32ff332deb63925e5da3145a57f 430 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 129 147 3.0E-6 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M892_07510 27a5f32ff332deb63925e5da3145a57f 430 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 66 272 2.8E-42 T 12-10-2018 IPR000477 Reverse transcriptase domain M892_07510 27a5f32ff332deb63925e5da3145a57f 430 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 8 350 2.2E-118 T 12-10-2018 IPR030931 Group II intron reverse transcriptase/maturase M892_26910 af296f5684bef2feced5f0958b31e9a5 407 Gene3D G3DSA:1.10.3860.10 5 407 6.0E-72 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 M892_26910 af296f5684bef2feced5f0958b31e9a5 407 SUPERFAMILY SSF118215 17 402 2.22E-97 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 M892_26910 af296f5684bef2feced5f0958b31e9a5 407 PRINTS PR00173 Glutamate-aspartate symporter signature 222 241 2.8E-12 T 12-10-2018 M892_26910 af296f5684bef2feced5f0958b31e9a5 407 PRINTS PR00173 Glutamate-aspartate symporter signature 289 315 2.8E-12 T 12-10-2018 M892_26910 af296f5684bef2feced5f0958b31e9a5 407 PRINTS PR00173 Glutamate-aspartate symporter signature 324 343 2.8E-12 T 12-10-2018 M892_26910 af296f5684bef2feced5f0958b31e9a5 407 PRINTS PR00173 Glutamate-aspartate symporter signature 187 206 2.8E-12 T 12-10-2018 M892_26910 af296f5684bef2feced5f0958b31e9a5 407 PRINTS PR00173 Glutamate-aspartate symporter signature 15 35 2.8E-12 T 12-10-2018 M892_26910 af296f5684bef2feced5f0958b31e9a5 407 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 5 406 36.574 T 12-10-2018 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 M892_26910 af296f5684bef2feced5f0958b31e9a5 407 Pfam PF00375 Sodium:dicarboxylate symporter family 17 400 2.2E-66 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 M892_08380 38cf8d5dfc594ff8461d69d967dc6ec6 355 Gene3D G3DSA:3.40.50.2000 8 160 1.3E-122 T 12-10-2018 M892_08380 38cf8d5dfc594ff8461d69d967dc6ec6 355 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 7 352 34.742 T 12-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 M892_08380 38cf8d5dfc594ff8461d69d967dc6ec6 355 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 348 6.7E-118 T 12-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 M892_08380 38cf8d5dfc594ff8461d69d967dc6ec6 355 SUPERFAMILY SSF53756 5 352 6.68E-127 T 12-10-2018 M892_08380 38cf8d5dfc594ff8461d69d967dc6ec6 355 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 8 144 4.7E-47 T 12-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 M892_08380 38cf8d5dfc594ff8461d69d967dc6ec6 355 Gene3D G3DSA:3.40.50.2000 161 318 1.3E-122 T 12-10-2018 M892_08380 38cf8d5dfc594ff8461d69d967dc6ec6 355 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 184 332 3.9E-35 T 12-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 M892_24530 ef7a6380b239ce2eda0d546426e2a81d 115 TIGRFAM TIGR02809 phasin_3: phasin family protein 4 113 9.3E-55 T 12-10-2018 IPR014176 Phasin, subfamily 3 M892_24530 ef7a6380b239ce2eda0d546426e2a81d 115 Pfam PF09361 Phasin protein 9 108 5.2E-20 T 12-10-2018 IPR018968 Phasin M892_24530 ef7a6380b239ce2eda0d546426e2a81d 115 PIRSF PIRSF028226 1 115 5.8E-56 T 12-10-2018 IPR014176 Phasin, subfamily 3 M892_27175 60b5d0717cb9ed6ca810acd58f54bba7 451 SUPERFAMILY SSF56219 183 445 2.49E-56 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily M892_27175 60b5d0717cb9ed6ca810acd58f54bba7 451 Gene3D G3DSA:3.60.10.10 176 444 4.9E-63 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily M892_27175 60b5d0717cb9ed6ca810acd58f54bba7 451 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 186 418 1.4E-10 T 12-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase M892_20745 1574e6b1b0b1a27e6851602e749fca2e 304 Pfam PF01040 UbiA prenyltransferase family 33 278 3.9E-64 T 12-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 M892_20745 1574e6b1b0b1a27e6851602e749fca2e 304 Gene3D G3DSA:1.10.357.140 23 183 2.7E-21 T 12-10-2018 M892_20745 1574e6b1b0b1a27e6851602e749fca2e 304 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 71 93 - T 12-10-2018 IPR030470 UbiA prenyltransferase conserved site M892_20745 1574e6b1b0b1a27e6851602e749fca2e 304 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 16 297 19.438 T 12-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 M892_20745 1574e6b1b0b1a27e6851602e749fca2e 304 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 19 295 6.5E-99 T 12-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 M892_10045 6800ef77b424cd046b44fac0124a40ad 108 Gene3D G3DSA:1.10.1740.10 8 88 8.2E-21 T 12-10-2018 M892_10045 6800ef77b424cd046b44fac0124a40ad 108 SUPERFAMILY SSF88946 6 95 5.89E-19 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 M892_10045 6800ef77b424cd046b44fac0124a40ad 108 Pfam PF04542 Sigma-70 region 2 27 92 2.0E-12 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 M892_02615 5ca350418024d32b9c6c539c77e5b94d 403 Pfam PF07690 Major Facilitator Superfamily 16 352 1.8E-35 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 M892_02615 5ca350418024d32b9c6c539c77e5b94d 403 SUPERFAMILY SSF103473 9 389 4.71E-53 T 12-10-2018 IPR036259 MFS transporter superfamily M892_02615 5ca350418024d32b9c6c539c77e5b94d 403 Gene3D G3DSA:1.20.1250.20 5 389 2.5E-45 T 12-10-2018 M892_02615 5ca350418024d32b9c6c539c77e5b94d 403 ProSitePatterns PS00216 Sugar transport proteins signature 1. 66 82 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 M892_05530 43deed130b05632aa29f24f1cf02723f 386 Pfam PF09002 Domain of unknown function (DUF1887) 1 379 5.9E-164 T 12-10-2018 IPR015093 Protein of unknown function DUF1887 M892_05530 43deed130b05632aa29f24f1cf02723f 386 Gene3D G3DSA:3.40.1350.10 251 376 1.7E-77 T 12-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 M892_05530 43deed130b05632aa29f24f1cf02723f 386 Gene3D G3DSA:3.40.50.10770 1 140 2.5E-60 T 12-10-2018 M892_05530 43deed130b05632aa29f24f1cf02723f 386 SUPERFAMILY SSF52980 1 382 1.18E-119 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 M892_05530 43deed130b05632aa29f24f1cf02723f 386 Gene3D G3DSA:1.10.10.680 169 250 1.7E-77 T 12-10-2018 M892_01455 936fcb514303790eafcf345c513acdb2 160 Gene3D G3DSA:3.40.630.30 3 137 1.3E-32 T 12-10-2018 M892_01455 936fcb514303790eafcf345c513acdb2 160 SUPERFAMILY SSF55729 4 146 2.62E-27 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_01455 936fcb514303790eafcf345c513acdb2 160 Pfam PF00583 Acetyltransferase (GNAT) family 29 146 2.3E-16 T 12-10-2018 IPR000182 GNAT domain M892_05360 ed4c0e5522de221ebc2042681b56008a 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 241 6.1E-22 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M892_05360 ed4c0e5522de221ebc2042681b56008a 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 73 7.6E-16 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 M892_05360 ed4c0e5522de221ebc2042681b56008a 246 SUPERFAMILY SSF161098 11 233 1.3E-40 T 12-10-2018 IPR035906 MetI-like superfamily M892_05360 ed4c0e5522de221ebc2042681b56008a 246 Gene3D G3DSA:1.10.3720.10 3 243 1.1E-50 T 12-10-2018 IPR035906 MetI-like superfamily M892_15725 3698bcb9c893e7ac1563498d08b31bae 94 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 73 1.4E-16 T 12-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain M892_15725 3698bcb9c893e7ac1563498d08b31bae 94 SUPERFAMILY SSF54909 1 94 1.57E-28 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel M892_15725 3698bcb9c893e7ac1563498d08b31bae 94 Gene3D G3DSA:3.30.70.100 1 94 2.1E-30 T 12-10-2018 M892_06245 585e4ab7a39b8e3bf6bd532c7b2f025f 402 Pfam PF02817 e3 binding domain 113 146 3.4E-13 T 12-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 M892_06245 585e4ab7a39b8e3bf6bd532c7b2f025f 402 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 3 402 3.5E-188 T 12-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 M892_06245 585e4ab7a39b8e3bf6bd532c7b2f025f 402 SUPERFAMILY SSF52777 173 401 1.25E-90 T 12-10-2018 M892_06245 585e4ab7a39b8e3bf6bd532c7b2f025f 402 Pfam PF00364 Biotin-requiring enzyme 4 76 3.5E-18 T 12-10-2018 IPR000089 Biotin/lipoyl attachment M892_06245 585e4ab7a39b8e3bf6bd532c7b2f025f 402 SUPERFAMILY SSF51230 1 95 2.75E-24 T 12-10-2018 IPR011053 Single hybrid motif M892_06245 585e4ab7a39b8e3bf6bd532c7b2f025f 402 Gene3D G3DSA:4.10.320.10 102 152 3.7E-22 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 M892_06245 585e4ab7a39b8e3bf6bd532c7b2f025f 402 SUPERFAMILY SSF47005 106 150 5.49E-12 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 M892_06245 585e4ab7a39b8e3bf6bd532c7b2f025f 402 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 M892_06245 585e4ab7a39b8e3bf6bd532c7b2f025f 402 Gene3D G3DSA:3.30.559.10 170 402 2.9E-98 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 M892_06245 585e4ab7a39b8e3bf6bd532c7b2f025f 402 Gene3D G3DSA:2.40.50.100 1 79 1.5E-21 T 12-10-2018 M892_06245 585e4ab7a39b8e3bf6bd532c7b2f025f 402 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 172 400 1.9E-82 T 12-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 M892_06615 fd9d0f17c42654dd8b7f8b4da09a39d4 141 Pfam PF05130 FlgN protein 2 131 3.8E-26 T 12-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 M892_06615 fd9d0f17c42654dd8b7f8b4da09a39d4 141 Gene3D G3DSA:1.20.58.300 1 113 4.7E-7 T 12-10-2018 M892_06615 fd9d0f17c42654dd8b7f8b4da09a39d4 141 SUPERFAMILY SSF140566 1 113 7.45E-23 T 12-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 M892_22505 5baace97bdd6c106ac7ae6dcc02ff829 295 SUPERFAMILY SSF46785 4 81 2.45E-11 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_22505 5baace97bdd6c106ac7ae6dcc02ff829 295 Pfam PF03466 LysR substrate binding domain 95 241 2.7E-7 T 12-10-2018 IPR005119 LysR, substrate-binding M892_22505 5baace97bdd6c106ac7ae6dcc02ff829 295 SUPERFAMILY SSF53850 95 292 2.53E-12 T 12-10-2018 M892_22505 5baace97bdd6c106ac7ae6dcc02ff829 295 Gene3D G3DSA:3.40.190.10 88 168 1.8E-9 T 12-10-2018 M892_22505 5baace97bdd6c106ac7ae6dcc02ff829 295 Gene3D G3DSA:1.10.10.10 1 86 3.9E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_22505 5baace97bdd6c106ac7ae6dcc02ff829 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 1.5E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_22505 5baace97bdd6c106ac7ae6dcc02ff829 295 Gene3D G3DSA:3.40.190.10 169 233 1.8E-9 T 12-10-2018 M892_11045 50e3b574351367176f80189346bde1e4 617 Gene3D G3DSA:1.20.5.570 584 617 1.3E-15 T 12-10-2018 M892_11045 50e3b574351367176f80189346bde1e4 617 SUPERFAMILY SSF143968 473 615 3.27E-37 T 12-10-2018 M892_11045 50e3b574351367176f80189346bde1e4 617 SUPERFAMILY SSF143968 323 461 2.22E-52 T 12-10-2018 M892_11045 50e3b574351367176f80189346bde1e4 617 SUPERFAMILY SSF50475 3 322 2.12E-122 T 12-10-2018 M892_11045 50e3b574351367176f80189346bde1e4 617 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 454 2.1E-165 T 12-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 M892_11045 50e3b574351367176f80189346bde1e4 617 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 473 569 1.8E-21 T 12-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 M892_11045 50e3b574351367176f80189346bde1e4 617 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 431 1.1E-161 T 12-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 M892_11045 50e3b574351367176f80189346bde1e4 617 Gene3D G3DSA:3.40.1670.10 479 583 2.5E-25 T 12-10-2018 M892_11045 50e3b574351367176f80189346bde1e4 617 Gene3D G3DSA:3.40.1670.10 337 453 4.2E-46 T 12-10-2018 M892_16795 c16eb4423cabd3884fd43528bc1918a4 152 Gene3D G3DSA:1.10.10.10 106 151 2.2E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_16795 c16eb4423cabd3884fd43528bc1918a4 152 Gene3D G3DSA:1.10.10.10 60 105 7.3E-11 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_16795 c16eb4423cabd3884fd43528bc1918a4 152 Hamap MF_01114 Regulatory protein RecX [recX]. 6 152 11.333 T 12-10-2018 IPR003783 Regulatory protein RecX GO:0006282 M892_16795 c16eb4423cabd3884fd43528bc1918a4 152 Pfam PF02631 RecX family 41 150 1.0E-25 T 12-10-2018 IPR003783 Regulatory protein RecX GO:0006282 M892_12315 7517095c95d05e4191fc9b28735aea53 118 SUPERFAMILY SSF75169 3 118 2.62E-35 T 12-10-2018 IPR027396 DsrEFH-like M892_12315 7517095c95d05e4191fc9b28735aea53 118 Gene3D G3DSA:3.40.1260.10 1 118 8.7E-38 T 12-10-2018 IPR027396 DsrEFH-like M892_12315 7517095c95d05e4191fc9b28735aea53 118 Pfam PF02635 DsrE/DsrF-like family 4 118 4.6E-24 T 12-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein M892_12315 7517095c95d05e4191fc9b28735aea53 118 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 3 118 1.9E-45 T 12-10-2018 IPR017462 Sulphur relay, TusC/DsrF M892_07035 b6900f9843566f79918524d55af2d2ef 306 SUPERFAMILY SSF46785 3 85 6.06E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_07035 b6900f9843566f79918524d55af2d2ef 306 Pfam PF03466 LysR substrate binding domain 91 291 2.3E-37 T 12-10-2018 IPR005119 LysR, substrate-binding M892_07035 b6900f9843566f79918524d55af2d2ef 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 2.8E-20 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_07035 b6900f9843566f79918524d55af2d2ef 306 Gene3D G3DSA:1.10.10.10 7 95 2.0E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_07035 b6900f9843566f79918524d55af2d2ef 306 Gene3D G3DSA:3.40.190.10 103 288 1.2E-58 T 12-10-2018 M892_07035 b6900f9843566f79918524d55af2d2ef 306 Gene3D G3DSA:3.40.190.10 163 261 1.2E-58 T 12-10-2018 M892_07035 b6900f9843566f79918524d55af2d2ef 306 SUPERFAMILY SSF53850 92 296 3.44E-38 T 12-10-2018 M892_07035 b6900f9843566f79918524d55af2d2ef 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.9E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_07035 b6900f9843566f79918524d55af2d2ef 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.9E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_07035 b6900f9843566f79918524d55af2d2ef 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.9E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_03625 ad3216ca18a31a316b4d95ad35666feb 346 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 55 339 4.9E-74 T 12-10-2018 IPR006507 Uncharacterised protein family UPF0283 M892_03625 ad3216ca18a31a316b4d95ad35666feb 346 Hamap MF_01085 UPF0283 membrane protein YcjF [ycjF]. 3 346 33.495 T 12-10-2018 IPR006507 Uncharacterised protein family UPF0283 M892_03625 ad3216ca18a31a316b4d95ad35666feb 346 Pfam PF05128 Domain of unknown function (DUF697) 181 339 2.2E-49 T 12-10-2018 IPR021147 Protein of unknown function DUF697 M892_07985 ce6ef51da0f23329268fe6fff47a65f0 242 SMART SM00850 145 239 3.9E-24 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 M892_07985 ce6ef51da0f23329268fe6fff47a65f0 242 SUPERFAMILY SSF52172 1 128 1.18E-28 T 12-10-2018 IPR011006 CheY-like superfamily M892_07985 ce6ef51da0f23329268fe6fff47a65f0 242 SMART SM00448 2 112 2.5E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_07985 ce6ef51da0f23329268fe6fff47a65f0 242 Gene3D G3DSA:3.40.50.2300 1 130 4.3E-29 T 12-10-2018 M892_07985 ce6ef51da0f23329268fe6fff47a65f0 242 Pfam PF00072 Response regulator receiver domain 5 112 5.4E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_07985 ce6ef51da0f23329268fe6fff47a65f0 242 Pfam PF04397 LytTr DNA-binding domain 146 238 2.8E-21 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 M892_07985 ce6ef51da0f23329268fe6fff47a65f0 242 Gene3D G3DSA:2.40.50.1020 149 241 1.8E-9 T 12-10-2018 M892_12300 9817c75052270e7e9c74baafbce1ebfa 260 SUPERFAMILY SSF54534 46 253 1.34E-64 T 12-10-2018 M892_12300 9817c75052270e7e9c74baafbce1ebfa 260 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 37 157 7.2E-34 T 12-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 M892_12300 9817c75052270e7e9c74baafbce1ebfa 260 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 164 251 1.4E-29 T 12-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain M892_12300 9817c75052270e7e9c74baafbce1ebfa 260 Gene3D G3DSA:3.10.50.40 148 260 8.7E-43 T 12-10-2018 M892_12300 9817c75052270e7e9c74baafbce1ebfa 260 Gene3D G3DSA:1.10.287.460 31 147 3.7E-32 T 12-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 M892_19830 a0137f7358dfce83ec6014c14b4ce461 307 Pfam PF03466 LysR substrate binding domain 89 301 6.1E-43 T 12-10-2018 IPR005119 LysR, substrate-binding M892_19830 a0137f7358dfce83ec6014c14b4ce461 307 Gene3D G3DSA:3.40.190.10 163 272 6.1E-65 T 12-10-2018 M892_19830 a0137f7358dfce83ec6014c14b4ce461 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 2.0E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_19830 a0137f7358dfce83ec6014c14b4ce461 307 SUPERFAMILY SSF53850 87 304 6.33E-40 T 12-10-2018 M892_19830 a0137f7358dfce83ec6014c14b4ce461 307 Gene3D G3DSA:1.10.10.10 3 91 3.1E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_19830 a0137f7358dfce83ec6014c14b4ce461 307 SUPERFAMILY SSF46785 4 112 5.33E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_19830 a0137f7358dfce83ec6014c14b4ce461 307 Gene3D G3DSA:3.40.190.10 92 299 6.1E-65 T 12-10-2018 M892_00365 556b74338b328f89a765d7c75a8ef2da 306 SUPERFAMILY SSF109604 24 300 7.53E-38 T 12-10-2018 M892_00365 556b74338b328f89a765d7c75a8ef2da 306 Pfam PF08668 HDOD domain 39 233 2.3E-35 T 12-10-2018 IPR013976 Metal-dependent hydrolase HDOD M892_00365 556b74338b328f89a765d7c75a8ef2da 306 Gene3D G3DSA:1.10.3210.10 19 299 1.6E-38 T 12-10-2018 M892_13005 3de1c6d73d3e937a6e54817d59a9ab25 952 SUPERFAMILY SSF50677 191 365 1.2E-58 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 M892_13005 3de1c6d73d3e937a6e54817d59a9ab25 952 SUPERFAMILY SSF47323 642 899 2.43E-65 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 M892_13005 3de1c6d73d3e937a6e54817d59a9ab25 952 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 M892_13005 3de1c6d73d3e937a6e54817d59a9ab25 952 SUPERFAMILY SSF46589 885 948 8.37E-18 T 12-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 M892_13005 3de1c6d73d3e937a6e54817d59a9ab25 952 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 885 945 3.1E-18 T 12-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 M892_13005 3de1c6d73d3e937a6e54817d59a9ab25 952 Pfam PF08264 Anticodon-binding domain of tRNA 674 826 1.0E-38 T 12-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 M892_13005 3de1c6d73d3e937a6e54817d59a9ab25 952 SUPERFAMILY SSF52374 1 641 6.5E-136 T 12-10-2018 M892_13005 3de1c6d73d3e937a6e54817d59a9ab25 952 PRINTS PR00986 Valyl-tRNA synthetase signature 236 253 1.4E-34 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 M892_13005 3de1c6d73d3e937a6e54817d59a9ab25 952 PRINTS PR00986 Valyl-tRNA synthetase signature 469 490 1.4E-34 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 M892_13005 3de1c6d73d3e937a6e54817d59a9ab25 952 PRINTS PR00986 Valyl-tRNA synthetase signature 500 518 1.4E-34 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 M892_13005 3de1c6d73d3e937a6e54817d59a9ab25 952 PRINTS PR00986 Valyl-tRNA synthetase signature 35 46 1.4E-34 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 M892_13005 3de1c6d73d3e937a6e54817d59a9ab25 952 PRINTS PR00986 Valyl-tRNA synthetase signature 369 382 1.4E-34 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 M892_13005 3de1c6d73d3e937a6e54817d59a9ab25 952 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 631 3.8E-226 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 M892_13005 3de1c6d73d3e937a6e54817d59a9ab25 952 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 950 16.052 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 M892_13005 3de1c6d73d3e937a6e54817d59a9ab25 952 Gene3D G3DSA:1.10.287.380 878 949 4.1E-19 T 12-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 M892_13005 3de1c6d73d3e937a6e54817d59a9ab25 952 TIGRFAM TIGR00422 valS: valine--tRNA ligase 1 933 0.0 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 M892_26755 482c064c90834baae86bbdcdd413572c 400 Pfam PF00266 Aminotransferase class-V 70 347 4.1E-30 T 12-10-2018 IPR000192 Aminotransferase class V domain M892_26755 482c064c90834baae86bbdcdd413572c 400 Gene3D G3DSA:3.40.640.10 49 295 6.6E-122 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M892_26755 482c064c90834baae86bbdcdd413572c 400 PIRSF PIRSF000524 31 398 1.7E-57 T 12-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 M892_26755 482c064c90834baae86bbdcdd413572c 400 Gene3D G3DSA:3.90.1150.10 41 386 6.6E-122 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M892_26755 482c064c90834baae86bbdcdd413572c 400 SUPERFAMILY SSF53383 36 395 3.74E-88 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M892_26755 482c064c90834baae86bbdcdd413572c 400 TIGRFAM TIGR02326 transamin_PhnW: 2-aminoethylphosphonate--pyruvate transaminase 35 398 2.7E-201 T 12-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 M892_26755 482c064c90834baae86bbdcdd413572c 400 TIGRFAM TIGR03301 PhnW-AepZ: 2-aminoethylphosphonate aminotransferase 39 395 2.3E-170 T 12-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 M892_26755 482c064c90834baae86bbdcdd413572c 400 Hamap MF_01376 2-aminoethylphosphonate--pyruvate transaminase [phnW]. 34 400 204.45 T 12-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 M892_16000 7c62af4d02fa4ab0db1d4163109779bc 117 Pfam PF05717 IS66 Orf2 like protein 9 103 2.5E-31 T 12-10-2018 IPR008878 Transposase IS66, Orf2 M892_03575 7c62af4d02fa4ab0db1d4163109779bc 117 Pfam PF05717 IS66 Orf2 like protein 9 103 2.5E-31 T 12-10-2018 IPR008878 Transposase IS66, Orf2 M892_08655 7c62af4d02fa4ab0db1d4163109779bc 117 Pfam PF05717 IS66 Orf2 like protein 9 103 2.5E-31 T 12-10-2018 IPR008878 Transposase IS66, Orf2 M892_10825 e4810b7c1262011d2c8701385f835de5 277 Gene3D G3DSA:3.40.50.720 119 239 2.8E-83 T 12-10-2018 M892_10825 e4810b7c1262011d2c8701385f835de5 277 Gene3D G3DSA:3.40.50.10860 8 258 2.8E-83 T 12-10-2018 M892_10825 e4810b7c1262011d2c8701385f835de5 277 SUPERFAMILY SSF53223 6 105 1.78E-31 T 12-10-2018 M892_10825 e4810b7c1262011d2c8701385f835de5 277 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 10 92 5.5E-23 T 12-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 M892_10825 e4810b7c1262011d2c8701385f835de5 277 SUPERFAMILY SSF51735 106 273 4.65E-41 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_10825 e4810b7c1262011d2c8701385f835de5 277 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 5 273 32.128 T 12-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 M892_10825 e4810b7c1262011d2c8701385f835de5 277 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 120 195 1.5E-13 T 12-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase M892_10825 e4810b7c1262011d2c8701385f835de5 277 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 8 274 2.0E-83 T 12-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 M892_10000 59f5d61247af4bffe5225f8625c78070 211 Pfam PF02036 SCP-2 sterol transfer family 15 111 2.2E-23 T 12-10-2018 IPR003033 SCP2 sterol-binding domain M892_10000 59f5d61247af4bffe5225f8625c78070 211 Gene3D G3DSA:3.30.1050.10 7 117 5.1E-6 T 12-10-2018 IPR036527 SCP2 sterol-binding domain superfamily M892_10000 59f5d61247af4bffe5225f8625c78070 211 SUPERFAMILY SSF55718 13 117 2.17E-10 T 12-10-2018 IPR036527 SCP2 sterol-binding domain superfamily M892_26850 ba52d146dd740611ae8d98face06f839 234 Gene3D G3DSA:1.10.3810.10 56 233 3.0E-54 T 12-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 M892_26850 ba52d146dd740611ae8d98face06f839 234 Hamap MF_00766 Biosynthetic peptidoglycan transglycosylase [mtgA]. 13 232 37.337 T 12-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 M892_26850 ba52d146dd740611ae8d98face06f839 234 SUPERFAMILY SSF53955 61 231 7.31E-58 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily M892_26850 ba52d146dd740611ae8d98face06f839 234 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 13 229 1.1E-64 T 12-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 M892_26850 ba52d146dd740611ae8d98face06f839 234 Pfam PF00912 Transglycosylase 60 226 8.9E-52 T 12-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 M892_19985 19f74f80b358e8e142ded36f7f7cce59 161 Pfam PF03412 Peptidase C39 family 10 126 1.0E-11 T 12-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 M892_19985 19f74f80b358e8e142ded36f7f7cce59 161 Gene3D G3DSA:3.90.70.10 10 134 5.7E-21 T 12-10-2018 M892_11725 b60f7cd6b5b44c24bba32b8fc4a7b813 162 Pfam PF13551 Winged helix-turn helix 24 83 1.1E-13 T 12-10-2018 M892_11725 b60f7cd6b5b44c24bba32b8fc4a7b813 162 SUPERFAMILY SSF46689 16 132 5.2E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_11725 b60f7cd6b5b44c24bba32b8fc4a7b813 162 Pfam PF13592 Winged helix-turn helix 100 156 1.8E-12 T 12-10-2018 IPR025959 Winged helix-turn helix domain M892_11725 b60f7cd6b5b44c24bba32b8fc4a7b813 162 Gene3D G3DSA:1.10.10.10 24 78 9.6E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_08200 484e1bfa4e70e9fe3e8c61192f2c0594 426 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 86 366 5.2E-23 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme M892_08200 484e1bfa4e70e9fe3e8c61192f2c0594 426 SUPERFAMILY SSF53686 1 424 3.01E-131 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme M892_08200 484e1bfa4e70e9fe3e8c61192f2c0594 426 Gene3D G3DSA:3.90.1380.10 1 79 3.8E-31 T 12-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily M892_08200 484e1bfa4e70e9fe3e8c61192f2c0594 426 Gene3D G3DSA:3.40.50.1100 101 399 1.3E-137 T 12-10-2018 M892_08200 484e1bfa4e70e9fe3e8c61192f2c0594 426 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 95 109 - T 12-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 M892_08200 484e1bfa4e70e9fe3e8c61192f2c0594 426 Gene3D G3DSA:3.40.50.1100 83 392 1.3E-137 T 12-10-2018 M892_08200 484e1bfa4e70e9fe3e8c61192f2c0594 426 Pfam PF14821 Threonine synthase N terminus 8 78 4.5E-8 T 12-10-2018 IPR029144 Threonine synthase, N-terminal M892_08200 484e1bfa4e70e9fe3e8c61192f2c0594 426 TIGRFAM TIGR00260 thrC: threonine synthase 52 390 4.3E-114 T 12-10-2018 IPR004450 Threonine synthase-like M892_05095 73343cd072beb1ba99f04c81e7072fdc 126 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 1 118 1.4E-47 T 12-10-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 M892_05095 73343cd072beb1ba99f04c81e7072fdc 126 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 1 114 4.8E-37 T 12-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 M892_05095 73343cd072beb1ba99f04c81e7072fdc 126 Gene3D G3DSA:3.10.129.10 1 124 7.0E-39 T 12-10-2018 M892_05095 73343cd072beb1ba99f04c81e7072fdc 126 PIRSF PIRSF003230 1 125 1.9E-44 T 12-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 M892_05095 73343cd072beb1ba99f04c81e7072fdc 126 SUPERFAMILY SSF54637 1 120 1.3E-37 T 12-10-2018 IPR029069 HotDog domain superfamily M892_05095 73343cd072beb1ba99f04c81e7072fdc 126 Pfam PF03061 Thioesterase superfamily 9 94 2.9E-18 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 M892_05350 d371e34be52a6452a66c15635b6d6f58 268 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 267 2.3E-101 T 12-10-2018 M892_05350 d371e34be52a6452a66c15635b6d6f58 268 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 267 5.9E-88 T 12-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 M892_05350 d371e34be52a6452a66c15635b6d6f58 268 Gene3D G3DSA:3.60.10.10 1 268 4.2E-79 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily M892_05350 d371e34be52a6452a66c15635b6d6f58 268 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 12-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 M892_05350 d371e34be52a6452a66c15635b6d6f58 268 SUPERFAMILY SSF56219 1 267 1.83E-86 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily M892_05350 d371e34be52a6452a66c15635b6d6f58 268 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 260 1.1E-19 T 12-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase M892_12335 22966c70a76c072563a1b2125c9b2ef9 699 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 697 0.0 T 12-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 M892_12335 22966c70a76c072563a1b2125c9b2ef9 699 SUPERFAMILY SSF54211 484 604 6.83E-47 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold M892_12335 22966c70a76c072563a1b2125c9b2ef9 699 Hamap MF_00054_B Elongation factor G [fusA]. 6 697 112.938 T 12-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 M892_12335 22966c70a76c072563a1b2125c9b2ef9 699 Gene3D G3DSA:2.40.30.10 299 405 2.2E-48 T 12-10-2018 M892_12335 22966c70a76c072563a1b2125c9b2ef9 699 PRINTS PR00315 GTP-binding elongation factor signature 58 66 9.4E-17 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M892_12335 22966c70a76c072563a1b2125c9b2ef9 699 PRINTS PR00315 GTP-binding elongation factor signature 101 112 9.4E-17 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M892_12335 22966c70a76c072563a1b2125c9b2ef9 699 PRINTS PR00315 GTP-binding elongation factor signature 85 95 9.4E-17 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M892_12335 22966c70a76c072563a1b2125c9b2ef9 699 PRINTS PR00315 GTP-binding elongation factor signature 137 146 9.4E-17 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M892_12335 22966c70a76c072563a1b2125c9b2ef9 699 PRINTS PR00315 GTP-binding elongation factor signature 12 25 9.4E-17 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M892_12335 22966c70a76c072563a1b2125c9b2ef9 699 Gene3D G3DSA:3.40.50.300 1 298 1.6E-115 T 12-10-2018 M892_12335 22966c70a76c072563a1b2125c9b2ef9 699 Pfam PF03144 Elongation factor Tu domain 2 329 396 3.1E-18 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 M892_12335 22966c70a76c072563a1b2125c9b2ef9 699 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 1.1E-34 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 M892_12335 22966c70a76c072563a1b2125c9b2ef9 699 Gene3D G3DSA:3.30.70.870 410 485 4.1E-32 T 12-10-2018 M892_12335 22966c70a76c072563a1b2125c9b2ef9 699 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site M892_12335 22966c70a76c072563a1b2125c9b2ef9 699 Gene3D G3DSA:3.30.70.240 609 680 2.7E-92 T 12-10-2018 M892_12335 22966c70a76c072563a1b2125c9b2ef9 699 SUPERFAMILY SSF54980 608 695 4.03E-30 T 12-10-2018 IPR035647 EF-G domain III/V-like M892_12335 22966c70a76c072563a1b2125c9b2ef9 699 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 1.2E-66 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M892_12335 22966c70a76c072563a1b2125c9b2ef9 699 SMART SM00889 485 603 2.6E-76 T 12-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 M892_12335 22966c70a76c072563a1b2125c9b2ef9 699 Gene3D G3DSA:3.30.230.10 489 693 2.7E-92 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M892_12335 22966c70a76c072563a1b2125c9b2ef9 699 Pfam PF14492 Elongation Factor G, domain II 409 483 1.5E-33 T 12-10-2018 M892_12335 22966c70a76c072563a1b2125c9b2ef9 699 SUPERFAMILY SSF52540 6 288 3.71E-106 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_12335 22966c70a76c072563a1b2125c9b2ef9 699 SUPERFAMILY SSF50447 271 409 1.92E-36 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily M892_12335 22966c70a76c072563a1b2125c9b2ef9 699 SUPERFAMILY SSF54980 407 485 8.63E-25 T 12-10-2018 IPR035647 EF-G domain III/V-like M892_12335 22966c70a76c072563a1b2125c9b2ef9 699 Pfam PF03764 Elongation factor G, domain IV 484 603 8.7E-49 T 12-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 M892_12335 22966c70a76c072563a1b2125c9b2ef9 699 SMART SM00838 605 693 6.1E-57 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like M892_12335 22966c70a76c072563a1b2125c9b2ef9 699 Pfam PF00679 Elongation factor G C-terminus 605 692 4.0E-31 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like M892_23055 397c9ac3dec10ebf907e45e5c1fa3d00 57 SUPERFAMILY SSF46689 1 49 7.17E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_23055 397c9ac3dec10ebf907e45e5c1fa3d00 57 Pfam PF12833 Helix-turn-helix domain 1 48 2.2E-9 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M892_23055 397c9ac3dec10ebf907e45e5c1fa3d00 57 Gene3D G3DSA:1.10.10.60 1 55 3.1E-13 T 12-10-2018 M892_04570 d2ac069a871a0bc4dc70060d56794121 347 SUPERFAMILY SSF53098 221 318 1.82E-7 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_04570 d2ac069a871a0bc4dc70060d56794121 347 Pfam PF13358 DDE superfamily endonuclease 169 312 3.0E-34 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_04570 d2ac069a871a0bc4dc70060d56794121 347 Pfam PF13551 Winged helix-turn helix 32 87 2.7E-8 T 12-10-2018 M892_04570 d2ac069a871a0bc4dc70060d56794121 347 SUPERFAMILY SSF46689 16 131 2.69E-25 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_04570 d2ac069a871a0bc4dc70060d56794121 347 Pfam PF13592 Winged helix-turn helix 98 155 7.3E-20 T 12-10-2018 IPR025959 Winged helix-turn helix domain M892_04570 d2ac069a871a0bc4dc70060d56794121 347 Gene3D G3DSA:3.30.420.470 137 340 8.0E-12 T 12-10-2018 M892_05935 03e09a391b136dc39ac0f7bfdecfa53d 95 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 33 95 8.7E-26 T 12-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain M892_05935 03e09a391b136dc39ac0f7bfdecfa53d 95 Pfam PF12836 Helix-hairpin-helix motif 33 93 1.7E-21 T 12-10-2018 M892_05935 03e09a391b136dc39ac0f7bfdecfa53d 95 SMART SM00278 43 62 9.2 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 M892_05935 03e09a391b136dc39ac0f7bfdecfa53d 95 SMART SM00278 73 92 31.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 M892_05935 03e09a391b136dc39ac0f7bfdecfa53d 95 SUPERFAMILY SSF47781 29 95 3.34E-26 T 12-10-2018 IPR010994 RuvA domain 2-like M892_05935 03e09a391b136dc39ac0f7bfdecfa53d 95 Gene3D G3DSA:1.10.150.280 21 95 1.8E-22 T 12-10-2018 M892_01245 89eff0a1d18dfed6c6b909fd54a4a79c 395 Pfam PF12698 ABC-2 family transporter protein 15 363 7.6E-37 T 12-10-2018 M892_05885 cd150b1580538358e7d2fdbee6306b56 329 Gene3D G3DSA:3.20.20.120 99 300 2.1E-113 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily M892_05885 cd150b1580538358e7d2fdbee6306b56 329 Pfam PF13378 Enolase C-terminal domain-like 125 283 1.2E-12 T 12-10-2018 IPR029065 Enolase C-terminal domain-like M892_05885 cd150b1580538358e7d2fdbee6306b56 329 SUPERFAMILY SSF54826 1 100 9.03E-25 T 12-10-2018 M892_05885 cd150b1580538358e7d2fdbee6306b56 329 SMART SM00922 116 213 5.6E-7 T 12-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal M892_05885 cd150b1580538358e7d2fdbee6306b56 329 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 4 326 20.631 T 12-10-2018 IPR010196 o-Succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 M892_05885 cd150b1580538358e7d2fdbee6306b56 329 TIGRFAM TIGR01927 menC_gamma/gm+: o-succinylbenzoate synthase 7 311 4.9E-111 T 12-10-2018 M892_05885 cd150b1580538358e7d2fdbee6306b56 329 SUPERFAMILY SSF51604 107 321 6.03E-47 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily M892_05885 cd150b1580538358e7d2fdbee6306b56 329 Gene3D G3DSA:3.30.390.10 4 306 2.1E-113 T 12-10-2018 IPR029017 Enolase-like, N-terminal M892_05365 01928b881c41ade64e535fc2fe095414 258 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 9 251 2.7E-81 T 12-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 M892_05365 01928b881c41ade64e535fc2fe095414 258 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 51 64 - T 12-10-2018 IPR018313 Solute-binding protein family 3, conserved site M892_05365 01928b881c41ade64e535fc2fe095414 258 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 29 252 1.1E-61 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M892_05365 01928b881c41ade64e535fc2fe095414 258 SMART SM00062 28 254 3.1E-69 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M892_05365 01928b881c41ade64e535fc2fe095414 258 Gene3D G3DSA:3.40.190.10 30 250 3.7E-72 T 12-10-2018 M892_05365 01928b881c41ade64e535fc2fe095414 258 Gene3D G3DSA:3.40.190.10 114 211 3.7E-72 T 12-10-2018 M892_05365 01928b881c41ade64e535fc2fe095414 258 SUPERFAMILY SSF53850 3 255 2.3E-69 T 12-10-2018 M892_05365 01928b881c41ade64e535fc2fe095414 258 SMART SM00079 28 253 1.6E-4 T 12-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 M892_27205 c949949f7f4e6e4b371652c19a895bfc 152 SMART SM00347 39 137 4.5E-25 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M892_27205 c949949f7f4e6e4b371652c19a895bfc 152 Pfam PF01047 MarR family 46 103 1.0E-16 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M892_27205 c949949f7f4e6e4b371652c19a895bfc 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 63 79 3.8E-8 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M892_27205 c949949f7f4e6e4b371652c19a895bfc 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 80 95 3.8E-8 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M892_27205 c949949f7f4e6e4b371652c19a895bfc 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 99 115 3.8E-8 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M892_27205 c949949f7f4e6e4b371652c19a895bfc 152 SUPERFAMILY SSF46785 12 151 1.37E-36 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_27205 c949949f7f4e6e4b371652c19a895bfc 152 Gene3D G3DSA:1.10.10.10 10 152 1.1E-37 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_23640 9b33b25e0ef43a6003d66dc0380eaf09 278 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_23640 9b33b25e0ef43a6003d66dc0380eaf09 278 Pfam PF00005 ABC transporter 25 166 1.8E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_23640 9b33b25e0ef43a6003d66dc0380eaf09 278 Gene3D G3DSA:3.40.50.300 3 277 3.9E-63 T 12-10-2018 M892_23640 9b33b25e0ef43a6003d66dc0380eaf09 278 SMART SM00382 34 216 2.0E-18 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_23640 9b33b25e0ef43a6003d66dc0380eaf09 278 SUPERFAMILY SSF52540 6 227 3.8E-69 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_23640 9b33b25e0ef43a6003d66dc0380eaf09 278 TIGRFAM TIGR01184 ntrCD: nitrate ABC transporter, ATP-binding proteins C and D 25 254 2.9E-106 T 12-10-2018 IPR005890 Nitrate transport ATP-binding subunit C/D GO:0015112|GO:0015706|GO:0016020 M892_00380 583e586b89dd64ac3e9a3b6380266623 165 SMART SM00448 4 125 8.4E-9 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_00380 583e586b89dd64ac3e9a3b6380266623 165 SUPERFAMILY SSF52172 2 131 2.85E-18 T 12-10-2018 IPR011006 CheY-like superfamily M892_00380 583e586b89dd64ac3e9a3b6380266623 165 Gene3D G3DSA:3.40.50.2300 5 132 4.3E-17 T 12-10-2018 M892_00380 583e586b89dd64ac3e9a3b6380266623 165 Pfam PF00072 Response regulator receiver domain 6 124 1.3E-12 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_06115 2299ae2fb7dcfc85cc63908192d797f8 220 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 1 102 1.2E-31 T 12-10-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 M892_06115 2299ae2fb7dcfc85cc63908192d797f8 220 Gene3D G3DSA:3.30.750.120 2 112 3.2E-34 T 12-10-2018 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily M892_06115 2299ae2fb7dcfc85cc63908192d797f8 220 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 4 219 28.235 T 12-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 M892_06115 2299ae2fb7dcfc85cc63908192d797f8 220 SUPERFAMILY SSF63848 113 218 4.18E-30 T 12-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 M892_06115 2299ae2fb7dcfc85cc63908192d797f8 220 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 115 215 3.3E-32 T 12-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 M892_06115 2299ae2fb7dcfc85cc63908192d797f8 220 Gene3D G3DSA:2.160.20.70 113 220 4.2E-31 T 12-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 M892_06115 2299ae2fb7dcfc85cc63908192d797f8 220 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 5 218 1.4E-78 T 12-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 M892_05830 0e8d98bd80026a08cfc375f94fdadc37 1037 SUPERFAMILY SSF82866 794 1010 1.57E-48 T 12-10-2018 M892_05830 0e8d98bd80026a08cfc375f94fdadc37 1037 SUPERFAMILY SSF82714 704 788 8.76E-17 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M892_05830 0e8d98bd80026a08cfc375f94fdadc37 1037 Gene3D G3DSA:3.30.2090.10 178 269 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M892_05830 0e8d98bd80026a08cfc375f94fdadc37 1037 SUPERFAMILY SSF82693 554 657 3.49E-17 T 12-10-2018 M892_05830 0e8d98bd80026a08cfc375f94fdadc37 1037 SUPERFAMILY SSF82714 183 266 1.22E-13 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M892_05830 0e8d98bd80026a08cfc375f94fdadc37 1037 Gene3D G3DSA:3.30.70.1430 556 654 0.0 T 12-10-2018 M892_05830 0e8d98bd80026a08cfc375f94fdadc37 1037 Gene3D G3DSA:1.20.1640.10 502 1005 0.0 T 12-10-2018 M892_05830 0e8d98bd80026a08cfc375f94fdadc37 1037 Gene3D G3DSA:3.30.70.1320 134 326 0.0 T 12-10-2018 M892_05830 0e8d98bd80026a08cfc375f94fdadc37 1037 Gene3D G3DSA:1.20.1640.10 10 501 0.0 T 12-10-2018 M892_05830 0e8d98bd80026a08cfc375f94fdadc37 1037 SUPERFAMILY SSF82693 139 324 2.28E-18 T 12-10-2018 M892_05830 0e8d98bd80026a08cfc375f94fdadc37 1037 Pfam PF00873 AcrB/AcrD/AcrF family 4 1008 2.2E-275 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_05830 0e8d98bd80026a08cfc375f94fdadc37 1037 Gene3D G3DSA:3.30.70.1440 655 848 0.0 T 12-10-2018 M892_05830 0e8d98bd80026a08cfc375f94fdadc37 1037 Gene3D G3DSA:3.30.2090.10 703 791 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M892_05830 0e8d98bd80026a08cfc375f94fdadc37 1037 SUPERFAMILY SSF82866 290 488 2.09E-45 T 12-10-2018 M892_05830 0e8d98bd80026a08cfc375f94fdadc37 1037 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.7E-71 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_05830 0e8d98bd80026a08cfc375f94fdadc37 1037 PRINTS PR00702 Acriflavin resistance protein family signature 611 625 1.7E-71 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_05830 0e8d98bd80026a08cfc375f94fdadc37 1037 PRINTS PR00702 Acriflavin resistance protein family signature 541 558 1.7E-71 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_05830 0e8d98bd80026a08cfc375f94fdadc37 1037 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 1.7E-71 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_05830 0e8d98bd80026a08cfc375f94fdadc37 1037 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.7E-71 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_05830 0e8d98bd80026a08cfc375f94fdadc37 1037 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 1.7E-71 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_05830 0e8d98bd80026a08cfc375f94fdadc37 1037 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.7E-71 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_05830 0e8d98bd80026a08cfc375f94fdadc37 1037 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 1.7E-71 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_05830 0e8d98bd80026a08cfc375f94fdadc37 1037 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.7E-71 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_05830 0e8d98bd80026a08cfc375f94fdadc37 1037 Gene3D G3DSA:3.30.70.1430 40 799 0.0 T 12-10-2018 M892_05830 0e8d98bd80026a08cfc375f94fdadc37 1037 SUPERFAMILY SSF82693 40 134 7.59E-25 T 12-10-2018 M892_02915 1f10533183f39809de195fea0a665590 345 SUPERFAMILY SSF52768 21 340 9.18E-85 T 12-10-2018 IPR023696 Ureohydrolase domain superfamily M892_02915 1f10533183f39809de195fea0a665590 345 Pfam PF00491 Arginase family 55 333 7.7E-62 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 M892_02915 1f10533183f39809de195fea0a665590 345 Hamap MF_00737 Formimidoylglutamase [hutG]. 16 335 42.681 T 12-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 M892_02915 1f10533183f39809de195fea0a665590 345 TIGRFAM TIGR01227 hutG: formimidoylglutamase 21 335 1.2E-114 T 12-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 M892_02915 1f10533183f39809de195fea0a665590 345 PIRSF PIRSF036979 34 341 1.8E-26 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 M892_02915 1f10533183f39809de195fea0a665590 345 PRINTS PR00116 Arginase signature 260 289 1.8E-5 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 M892_02915 1f10533183f39809de195fea0a665590 345 PRINTS PR00116 Arginase signature 133 148 1.8E-5 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 M892_02915 1f10533183f39809de195fea0a665590 345 ProSitePatterns PS01053 Arginase family signature. 263 284 - T 12-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 M892_02915 1f10533183f39809de195fea0a665590 345 Gene3D G3DSA:3.40.800.10 13 344 3.2E-131 T 12-10-2018 M892_15650 9c1766943e4ce467d330b7a0aaa0fbbb 150 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 1 144 41.17 T 12-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 M892_15650 9c1766943e4ce467d330b7a0aaa0fbbb 150 PIRSF PIRSF006173 1 144 1.7E-65 T 12-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 M892_15650 9c1766943e4ce467d330b7a0aaa0fbbb 150 Pfam PF03692 Putative zinc- or iron-chelating domain 23 91 1.3E-8 T 12-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein M892_24735 d57e6cd4fe41a16fe9c1f2a69574bf2a 440 SUPERFAMILY SSF56112 98 330 1.26E-16 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily M892_24735 d57e6cd4fe41a16fe9c1f2a69574bf2a 440 Pfam PF03109 ABC1 family 115 230 3.0E-29 T 12-10-2018 IPR004147 UbiB domain M892_09230 240c12cc19e5c3911ec616e8b4d9b392 72 Gene3D G3DSA:2.30.170.50 1 71 1.4E-33 T 12-10-2018 M892_09230 240c12cc19e5c3911ec616e8b4d9b392 72 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 69 31.864 T 12-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_09230 240c12cc19e5c3911ec616e8b4d9b392 72 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 67 3.1E-35 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_09230 240c12cc19e5c3911ec616e8b4d9b392 72 PRINTS PR01249 Ribosomal protein L31 signature 32 47 3.6E-23 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_09230 240c12cc19e5c3911ec616e8b4d9b392 72 PRINTS PR01249 Ribosomal protein L31 signature 2 19 3.6E-23 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_09230 240c12cc19e5c3911ec616e8b4d9b392 72 PRINTS PR01249 Ribosomal protein L31 signature 47 65 3.6E-23 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_09230 240c12cc19e5c3911ec616e8b4d9b392 72 Pfam PF01197 Ribosomal protein L31 1 66 1.6E-32 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_09230 240c12cc19e5c3911ec616e8b4d9b392 72 ProSitePatterns PS01143 Ribosomal protein L31 signature. 36 57 - T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_09230 240c12cc19e5c3911ec616e8b4d9b392 72 SUPERFAMILY SSF143800 1 68 2.55E-27 T 12-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_17960 255f281b52851902c31bfeaa957c1d3e 329 SUPERFAMILY SSF161098 72 312 8.63E-54 T 12-10-2018 IPR035906 MetI-like superfamily M892_17960 255f281b52851902c31bfeaa957c1d3e 329 Gene3D G3DSA:1.10.3720.10 68 324 4.4E-63 T 12-10-2018 IPR035906 MetI-like superfamily M892_17960 255f281b52851902c31bfeaa957c1d3e 329 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 310 2.1E-8 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M892_24830 de874e4576b74340add119d0113b2b7c 239 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 132 160 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 M892_24830 de874e4576b74340add119d0113b2b7c 239 Gene3D G3DSA:3.40.50.720 1 239 3.6E-77 T 12-10-2018 M892_24830 de874e4576b74340add119d0113b2b7c 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 2.2E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_24830 de874e4576b74340add119d0113b2b7c 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 2.2E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_24830 de874e4576b74340add119d0113b2b7c 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 2.2E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_24830 de874e4576b74340add119d0113b2b7c 239 Pfam PF00106 short chain dehydrogenase 3 189 4.4E-52 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_24830 de874e4576b74340add119d0113b2b7c 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 1.1E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_24830 de874e4576b74340add119d0113b2b7c 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.1E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_24830 de874e4576b74340add119d0113b2b7c 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 1.1E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_24830 de874e4576b74340add119d0113b2b7c 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 1.1E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_24830 de874e4576b74340add119d0113b2b7c 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 221 1.1E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_24830 de874e4576b74340add119d0113b2b7c 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 1.1E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_24830 de874e4576b74340add119d0113b2b7c 239 SUPERFAMILY SSF51735 3 223 2.23E-62 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_14565 94e929b892549e1910d4427cd0b1ac4c 240 Gene3D G3DSA:3.90.1010.10 41 126 7.6E-7 T 12-10-2018 M892_14565 94e929b892549e1910d4427cd0b1ac4c 240 Pfam PF01592 NifU-like N terminal domain 65 112 7.2E-5 T 12-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 M892_14565 94e929b892549e1910d4427cd0b1ac4c 240 SUPERFAMILY SSF82649 66 111 5.49E-8 T 12-10-2018 M892_14660 471fca94a575457d01b88731855f4505 199 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 4 182 3.4E-63 T 12-10-2018 IPR006287 Protein/nucleic acid deglycase DJ-1 Reactome: R-HSA-3899300 M892_14660 471fca94a575457d01b88731855f4505 199 Pfam PF01965 DJ-1/PfpI family 3 169 6.1E-41 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 M892_14660 471fca94a575457d01b88731855f4505 199 Gene3D G3DSA:3.40.50.880 1 193 5.2E-49 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M892_14660 471fca94a575457d01b88731855f4505 199 SUPERFAMILY SSF52317 3 190 1.26E-44 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M892_08220 ed4280ed5015a6565c6f1195b098c4b1 160 Pfam PF03737 Aldolase/RraA 5 152 2.6E-41 T 12-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein M892_08220 ed4280ed5015a6565c6f1195b098c4b1 160 SUPERFAMILY SSF89562 1 158 2.22E-46 T 12-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily M892_08220 ed4280ed5015a6565c6f1195b098c4b1 160 Gene3D G3DSA:3.50.30.40 1 160 2.2E-64 T 12-10-2018 M892_08220 ed4280ed5015a6565c6f1195b098c4b1 160 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 153 8.3E-69 T 12-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 M892_21410 4e92792276845efaf7b2ed6fba1d5a87 156 SUPERFAMILY SSF81573 63 121 1.57E-10 T 12-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily M892_21410 4e92792276845efaf7b2ed6fba1d5a87 156 Gene3D G3DSA:1.20.5.620 62 122 1.5E-13 T 12-10-2018 M892_21410 4e92792276845efaf7b2ed6fba1d5a87 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 12.726 T 12-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 M892_21410 4e92792276845efaf7b2ed6fba1d5a87 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 3.8E-45 T 12-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 M892_21410 4e92792276845efaf7b2ed6fba1d5a87 156 Pfam PF00430 ATP synthase B/B' CF(0) 8 137 5.6E-30 T 12-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 M892_26390 5d6593acd12593f8bd99e9053f29acb6 445 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 216 439 8.6E-51 T 12-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 M892_26390 5d6593acd12593f8bd99e9053f29acb6 445 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 2 100 9.0E-16 T 12-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 M892_06190 fea1c06fbd739164d6cc30d7d30fba84 159 SUPERFAMILY SSF54197 20 150 5.53E-35 T 12-10-2018 IPR036265 HIT-like superfamily M892_06190 fea1c06fbd739164d6cc30d7d30fba84 159 PIRSF PIRSF000714 19 157 1.4E-53 T 12-10-2018 IPR026026 Histidine triad hydrolase, Hint-type M892_06190 fea1c06fbd739164d6cc30d7d30fba84 159 Gene3D G3DSA:3.30.428.10 18 159 1.1E-43 T 12-10-2018 IPR036265 HIT-like superfamily M892_06190 fea1c06fbd739164d6cc30d7d30fba84 159 Pfam PF01230 HIT domain 28 116 3.6E-19 T 12-10-2018 IPR001310 Histidine triad (HIT) protein M892_14135 462239d9d202836f526293163ae29361 307 PIRSF PIRSF004654 1 296 1.5E-90 T 12-10-2018 IPR023605 Lipoprotein NlpI M892_14135 462239d9d202836f526293163ae29361 307 SMART SM00028 238 271 33.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_14135 462239d9d202836f526293163ae29361 307 SMART SM00028 134 167 84.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_14135 462239d9d202836f526293163ae29361 307 SMART SM00028 66 99 0.057 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_14135 462239d9d202836f526293163ae29361 307 SMART SM00028 100 133 0.0088 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_14135 462239d9d202836f526293163ae29361 307 Gene3D G3DSA:1.25.40.10 25 299 5.8E-81 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_14135 462239d9d202836f526293163ae29361 307 SUPERFAMILY SSF48452 34 286 2.81E-69 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_15745 293f02909a80daa5f40d711a9cfe0130 525 Gene3D G3DSA:1.10.1200.140 388 438 5.8E-29 T 12-10-2018 M892_15745 293f02909a80daa5f40d711a9cfe0130 525 SUPERFAMILY SSF53649 8 504 7.59E-114 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 M892_15745 293f02909a80daa5f40d711a9cfe0130 525 SMART SM00098 27 422 5.7E-55 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 M892_15745 293f02909a80daa5f40d711a9cfe0130 525 Gene3D G3DSA:3.30.40.70 439 463 4.6E-20 T 12-10-2018 M892_15745 293f02909a80daa5f40d711a9cfe0130 525 Gene3D G3DSA:3.40.720.10 464 525 1.5E-6 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 M892_15745 293f02909a80daa5f40d711a9cfe0130 525 Gene3D G3DSA:3.40.720.10 24 377 4.6E-140 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 M892_15745 293f02909a80daa5f40d711a9cfe0130 525 Pfam PF00245 Alkaline phosphatase 26 501 1.9E-84 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 M892_15745 293f02909a80daa5f40d711a9cfe0130 525 ProSitePatterns PS00123 Alkaline phosphatase active site. 85 93 - T 12-10-2018 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 M892_15745 293f02909a80daa5f40d711a9cfe0130 525 PRINTS PR00113 Alkaline phosphatase signature 166 176 1.9E-37 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 M892_15745 293f02909a80daa5f40d711a9cfe0130 525 PRINTS PR00113 Alkaline phosphatase signature 26 46 1.9E-37 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 M892_15745 293f02909a80daa5f40d711a9cfe0130 525 PRINTS PR00113 Alkaline phosphatase signature 267 296 1.9E-37 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 M892_15745 293f02909a80daa5f40d711a9cfe0130 525 PRINTS PR00113 Alkaline phosphatase signature 122 142 1.9E-37 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 M892_15745 293f02909a80daa5f40d711a9cfe0130 525 PRINTS PR00113 Alkaline phosphatase signature 85 100 1.9E-37 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 M892_18275 f359e060a04ad068d2f2a504ab12cdba 400 Gene3D G3DSA:1.20.1250.20 5 390 1.3E-35 T 12-10-2018 M892_18275 f359e060a04ad068d2f2a504ab12cdba 400 Pfam PF07690 Major Facilitator Superfamily 22 351 4.8E-18 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 M892_18275 f359e060a04ad068d2f2a504ab12cdba 400 SUPERFAMILY SSF103473 5 387 3.01E-35 T 12-10-2018 IPR036259 MFS transporter superfamily M892_13355 3f922198d662a3309ae556621d011f57 392 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 12-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 M892_13355 3f922198d662a3309ae556621d011f57 392 Pfam PF01494 FAD binding domain 4 337 6.7E-25 T 12-10-2018 IPR002938 FAD-binding domain GO:0071949 M892_13355 3f922198d662a3309ae556621d011f57 392 Gene3D G3DSA:3.50.50.60 5 336 2.8E-96 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_13355 3f922198d662a3309ae556621d011f57 392 SUPERFAMILY SSF51905 3 382 8.03E-49 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_13355 3f922198d662a3309ae556621d011f57 392 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 388 1.1E-125 T 12-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 M892_13355 3f922198d662a3309ae556621d011f57 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 1.3E-10 T 12-10-2018 M892_13355 3f922198d662a3309ae556621d011f57 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 1.3E-10 T 12-10-2018 M892_13355 3f922198d662a3309ae556621d011f57 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 1.3E-10 T 12-10-2018 M892_13355 3f922198d662a3309ae556621d011f57 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 1.3E-10 T 12-10-2018 M892_13355 3f922198d662a3309ae556621d011f57 392 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 5 388 5.2E-149 T 12-10-2018 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 M892_13355 3f922198d662a3309ae556621d011f57 392 Gene3D G3DSA:3.30.9.50 81 270 2.8E-96 T 12-10-2018 M892_01885 d65381b3c26cb44649c47f1c40b6b62c 248 SUPERFAMILY SSF51206 23 162 1.44E-31 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like M892_01885 d65381b3c26cb44649c47f1c40b6b62c 248 Gene3D G3DSA:2.60.120.10 43 164 2.3E-48 T 12-10-2018 IPR014710 RmlC-like jelly roll fold M892_01885 d65381b3c26cb44649c47f1c40b6b62c 248 Pfam PF00027 Cyclic nucleotide-binding domain 51 132 6.9E-15 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain M892_01885 d65381b3c26cb44649c47f1c40b6b62c 248 Gene3D G3DSA:1.10.10.10 165 247 3.3E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_01885 d65381b3c26cb44649c47f1c40b6b62c 248 SMART SM00100 30 151 2.0E-20 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain M892_01885 d65381b3c26cb44649c47f1c40b6b62c 248 ProSitePatterns PS00042 Crp-type HTH domain signature. 195 218 - T 12-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 M892_01885 d65381b3c26cb44649c47f1c40b6b62c 248 Pfam PF13545 Crp-like helix-turn-helix domain 168 241 2.1E-17 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 M892_01885 d65381b3c26cb44649c47f1c40b6b62c 248 SUPERFAMILY SSF46785 165 244 2.73E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_01885 d65381b3c26cb44649c47f1c40b6b62c 248 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 193 209 2.5E-11 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 M892_01885 d65381b3c26cb44649c47f1c40b6b62c 248 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 209 224 2.5E-11 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 M892_01885 d65381b3c26cb44649c47f1c40b6b62c 248 SMART SM00419 187 235 4.3E-15 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 M892_10200 cd72341a2f459533af64bbb96b716e66 69 PRINTS PR00050 Cold shock protein signature 7 22 8.5E-14 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 M892_10200 cd72341a2f459533af64bbb96b716e66 69 PRINTS PR00050 Cold shock protein signature 42 60 8.5E-14 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 M892_10200 cd72341a2f459533af64bbb96b716e66 69 PRINTS PR00050 Cold shock protein signature 27 36 8.5E-14 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 M892_10200 cd72341a2f459533af64bbb96b716e66 69 SUPERFAMILY SSF50249 4 68 2.42E-22 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M892_10200 cd72341a2f459533af64bbb96b716e66 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 36 - T 12-10-2018 IPR019844 Cold-shock conserved site M892_10200 cd72341a2f459533af64bbb96b716e66 69 Gene3D G3DSA:2.40.50.140 6 69 1.5E-26 T 12-10-2018 M892_10200 cd72341a2f459533af64bbb96b716e66 69 PIRSF PIRSF002599 1 69 3.7E-21 T 12-10-2018 IPR012156 Cold shock, CspA GO:0003676 M892_10200 cd72341a2f459533af64bbb96b716e66 69 SMART SM00357 6 69 2.0E-25 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 M892_10200 cd72341a2f459533af64bbb96b716e66 69 Pfam PF00313 'Cold-shock' DNA-binding domain 6 68 6.6E-26 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 M892_16605 1cbdd83cbaacb4afe73b263c6a821cf9 313 PIRSF PIRSF002867 1 313 7.5E-106 T 12-10-2018 IPR024181 Chemotaxis response regulator CheV M892_16605 1cbdd83cbaacb4afe73b263c6a821cf9 313 SUPERFAMILY SSF50341 16 163 1.03E-32 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 M892_16605 1cbdd83cbaacb4afe73b263c6a821cf9 313 Pfam PF00072 Response regulator receiver domain 186 303 1.3E-13 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_16605 1cbdd83cbaacb4afe73b263c6a821cf9 313 Pfam PF01584 CheW-like domain 21 160 2.2E-33 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 M892_16605 1cbdd83cbaacb4afe73b263c6a821cf9 313 SUPERFAMILY SSF52172 183 310 1.05E-20 T 12-10-2018 IPR011006 CheY-like superfamily M892_16605 1cbdd83cbaacb4afe73b263c6a821cf9 313 SMART SM00260 17 158 2.7E-25 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 M892_16605 1cbdd83cbaacb4afe73b263c6a821cf9 313 Gene3D G3DSA:2.40.50.180 39 158 5.2E-27 T 12-10-2018 M892_16605 1cbdd83cbaacb4afe73b263c6a821cf9 313 Gene3D G3DSA:3.40.50.2300 183 311 1.5E-20 T 12-10-2018 M892_16605 1cbdd83cbaacb4afe73b263c6a821cf9 313 Gene3D G3DSA:2.30.30.40 24 152 5.2E-27 T 12-10-2018 M892_16605 1cbdd83cbaacb4afe73b263c6a821cf9 313 SMART SM00448 184 305 1.3E-11 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_01330 5f86a9d38af70eb78d24e32227633cd4 256 Pfam PF01925 Sulfite exporter TauE/SafE 8 249 8.3E-38 T 12-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 M892_23670 a58699d62a4d7703d7b1188a539f8ec6 301 Gene3D G3DSA:3.30.950.10 167 295 8.3E-35 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 M892_23670 a58699d62a4d7703d7b1188a539f8ec6 301 Gene3D G3DSA:3.40.1010.10 49 166 3.9E-42 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 M892_23670 a58699d62a4d7703d7b1188a539f8ec6 301 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 131 164 - T 12-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 M892_23670 a58699d62a4d7703d7b1188a539f8ec6 301 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 53 261 4.2E-42 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 M892_23670 a58699d62a4d7703d7b1188a539f8ec6 301 SUPERFAMILY SSF53790 49 288 3.79E-67 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 M892_23670 a58699d62a4d7703d7b1188a539f8ec6 301 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 51 285 3.8E-84 T 12-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 M892_04595 f624d7325b18520b0830a07ebb0143d6 145 Gene3D G3DSA:3.30.1460.10 1 118 5.9E-24 T 12-10-2018 M892_04595 f624d7325b18520b0830a07ebb0143d6 145 Pfam PF05932 Tir chaperone protein (CesT) family 8 82 4.2E-8 T 12-10-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 M892_04595 f624d7325b18520b0830a07ebb0143d6 145 SUPERFAMILY SSF69635 4 117 1.05E-27 T 12-10-2018 M892_16370 143727f59bec57b6e1dfc02438415d1b 1035 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 424 1.2E-170 T 12-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 M892_16370 143727f59bec57b6e1dfc02438415d1b 1035 SUPERFAMILY SSF50249 40 124 4.07E-19 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M892_16370 143727f59bec57b6e1dfc02438415d1b 1035 Gene3D G3DSA:2.40.50.140 32 125 4.0E-32 T 12-10-2018 M892_16370 143727f59bec57b6e1dfc02438415d1b 1035 Gene3D G3DSA:3.40.1260.20 400 508 9.7E-39 T 12-10-2018 M892_16370 143727f59bec57b6e1dfc02438415d1b 1035 Pfam PF10150 Ribonuclease E/G family 121 390 2.5E-94 T 12-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 M892_16370 143727f59bec57b6e1dfc02438415d1b 1035 SMART SM00316 37 119 1.1E-10 T 12-10-2018 IPR022967 RNA-binding domain, S1 M892_16370 143727f59bec57b6e1dfc02438415d1b 1035 Hamap MF_00970 Ribonuclease E [rne]. 1 1022 36.195 T 12-10-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 M892_16370 143727f59bec57b6e1dfc02438415d1b 1035 Pfam PF00575 S1 RNA binding domain 37 118 5.1E-14 T 12-10-2018 IPR003029 S1 domain GO:0003676 M892_02020 ec668b902ee837308021ff9e48aba166 781 Gene3D G3DSA:3.40.50.300 455 598 2.7E-9 T 12-10-2018 M892_02020 ec668b902ee837308021ff9e48aba166 781 SUPERFAMILY SSF52540 456 627 8.16E-9 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_23510 5fcdefb57ed44cc681703c4fd533873e 213 SUPERFAMILY SSF53098 50 207 7.71E-49 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_23510 5fcdefb57ed44cc681703c4fd533873e 213 Pfam PF00665 Integrase core domain 52 163 5.6E-26 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 M892_23510 5fcdefb57ed44cc681703c4fd533873e 213 Gene3D G3DSA:3.30.420.10 39 206 7.9E-18 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M892_23540 cd42ec66a1467eb2e5dfd528ac70653c 1179 Gene3D G3DSA:3.90.1570.50 99 283 7.9E-18 T 12-10-2018 M892_23540 cd42ec66a1467eb2e5dfd528ac70653c 1179 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 1 228 1.3E-32 T 12-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 M892_23540 cd42ec66a1467eb2e5dfd528ac70653c 1179 Pfam PF04851 Type III restriction enzyme, res subunit 291 499 5.1E-16 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 M892_23540 cd42ec66a1467eb2e5dfd528ac70653c 1179 Pfam PF11867 Domain of unknown function (DUF3387) 786 1079 1.2E-7 T 12-10-2018 IPR021810 Protein of unknown function DUF3387 M892_23540 cd42ec66a1467eb2e5dfd528ac70653c 1179 Gene3D G3DSA:3.40.50.300 528 786 5.0E-36 T 12-10-2018 M892_23540 cd42ec66a1467eb2e5dfd528ac70653c 1179 SUPERFAMILY SSF52540 255 513 9.08E-21 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_23540 cd42ec66a1467eb2e5dfd528ac70653c 1179 Gene3D G3DSA:3.40.50.300 290 521 1.2E-38 T 12-10-2018 M892_23540 cd42ec66a1467eb2e5dfd528ac70653c 1179 SMART SM00487 292 518 2.2E-5 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain M892_23540 cd42ec66a1467eb2e5dfd528ac70653c 1179 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 6 779 1.6E-132 T 12-10-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 M892_09845 7383d91f2920614ba435cf76cf814ccc 291 Gene3D G3DSA:3.90.1280.10 225 284 2.3E-20 T 12-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 M892_09845 7383d91f2920614ba435cf76cf814ccc 291 PIRSF PIRSF005261 1 284 1.7E-69 T 12-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 M892_09845 7383d91f2920614ba435cf76cf814ccc 291 SUPERFAMILY SSF118352 223 281 2.09E-18 T 12-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 M892_09845 7383d91f2920614ba435cf76cf814ccc 291 Gene3D G3DSA:3.55.30.10 1 175 3.7E-62 T 12-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 M892_09845 7383d91f2920614ba435cf76cf814ccc 291 Pfam PF01430 Hsp33 protein 6 272 3.5E-79 T 12-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 M892_09845 7383d91f2920614ba435cf76cf814ccc 291 Hamap MF_00117 33 kDa chaperonin [hslO]. 3 283 32.099 T 12-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 M892_09845 7383d91f2920614ba435cf76cf814ccc 291 Gene3D G3DSA:1.10.287.480 178 224 1.1E-22 T 12-10-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily M892_09845 7383d91f2920614ba435cf76cf814ccc 291 SUPERFAMILY SSF64397 4 231 2.62E-74 T 12-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 M892_06745 ccbe04ff61b840ebf5a7c1a45e030508 269 SUPERFAMILY SSF48452 191 255 2.39E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_06745 ccbe04ff61b840ebf5a7c1a45e030508 269 Pfam PF13369 Transglutaminase-like superfamily 34 184 5.7E-43 T 12-10-2018 IPR032698 Protein SirB1, N-terminal Reactome: R-HSA-8951664|Reactome: R-HSA-983168 M892_06745 ccbe04ff61b840ebf5a7c1a45e030508 269 Pfam PF13371 Tetratricopeptide repeat 187 259 3.4E-23 T 12-10-2018 M892_10555 d979041072884e9e71b07b5e6728e1a6 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 43 3.8E-26 T 12-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_10555 d979041072884e9e71b07b5e6728e1a6 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 12-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_10555 d979041072884e9e71b07b5e6728e1a6 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 16.4 T 12-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_10555 d979041072884e9e71b07b5e6728e1a6 44 Pfam PF00468 Ribosomal protein L34 1 43 4.9E-24 T 12-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_10555 d979041072884e9e71b07b5e6728e1a6 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 39 1.0E-14 T 12-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_15630 721a68afba60c959c5c027f5880b46ef 126 SUPERFAMILY SSF55298 1 125 4.87E-42 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 M892_15630 721a68afba60c959c5c027f5880b46ef 126 Pfam PF01042 Endoribonuclease L-PSP 8 124 4.6E-38 T 12-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 M892_15630 721a68afba60c959c5c027f5880b46ef 126 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 124 1.7E-46 T 12-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 M892_15630 721a68afba60c959c5c027f5880b46ef 126 Gene3D G3DSA:3.30.1330.40 1 126 1.8E-49 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 M892_12960 2015bc073f71dadb845e3bfbe7f0b736 309 Gene3D G3DSA:3.40.50.1370 8 304 3.9E-121 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 M892_12960 2015bc073f71dadb845e3bfbe7f0b736 309 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 8 305 9.9E-116 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 M892_12960 2015bc073f71dadb845e3bfbe7f0b736 309 Gene3D G3DSA:3.40.50.1370 135 292 3.9E-121 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 M892_12960 2015bc073f71dadb845e3bfbe7f0b736 309 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 7 307 38.709 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 M892_12960 2015bc073f71dadb845e3bfbe7f0b736 309 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 2.2E-45 T 12-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 M892_12960 2015bc073f71dadb845e3bfbe7f0b736 309 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 303 5.0E-33 T 12-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 M892_12960 2015bc073f71dadb845e3bfbe7f0b736 309 SUPERFAMILY SSF53671 4 307 4.71E-102 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 M892_12960 2015bc073f71dadb845e3bfbe7f0b736 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 6.1E-27 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 M892_12960 2015bc073f71dadb845e3bfbe7f0b736 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 6.1E-27 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 M892_12960 2015bc073f71dadb845e3bfbe7f0b736 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 6.1E-27 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 M892_12960 2015bc073f71dadb845e3bfbe7f0b736 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 6.1E-27 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 M892_12960 2015bc073f71dadb845e3bfbe7f0b736 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 226 235 6.4E-37 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 M892_12960 2015bc073f71dadb845e3bfbe7f0b736 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 300 6.4E-37 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 M892_12960 2015bc073f71dadb845e3bfbe7f0b736 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 79 88 6.4E-37 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 M892_12960 2015bc073f71dadb845e3bfbe7f0b736 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 134 151 6.4E-37 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 M892_12960 2015bc073f71dadb845e3bfbe7f0b736 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 6.4E-37 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 M892_12960 2015bc073f71dadb845e3bfbe7f0b736 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 264 269 6.4E-37 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 M892_12960 2015bc073f71dadb845e3bfbe7f0b736 309 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 M892_19365 3ea20be6d0181b51f2515f207daeec0f 203 Pfam PF01810 LysE type translocator 13 202 4.0E-36 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 M892_19365 3ea20be6d0181b51f2515f207daeec0f 203 PIRSF PIRSF006324 1 203 3.6E-49 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 M892_15185 7495314ad565f12af38d9bb14dfa5e16 391 Gene3D G3DSA:3.90.350.10 66 336 1.1E-73 T 12-10-2018 IPR014736 Transposase, Tn5-like, core M892_15185 7495314ad565f12af38d9bb14dfa5e16 391 SUPERFAMILY SSF53098 1 384 1.06E-103 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_15185 7495314ad565f12af38d9bb14dfa5e16 391 Pfam PF14706 Transposase DNA-binding 9 65 3.9E-17 T 12-10-2018 IPR014735 Transposase, Tn5-like, N-terminal M892_15185 7495314ad565f12af38d9bb14dfa5e16 391 Gene3D G3DSA:1.10.740.10 337 391 2.9E-10 T 12-10-2018 IPR014737 Transposase, Tn5-like, C-terminal M892_15185 7495314ad565f12af38d9bb14dfa5e16 391 Gene3D G3DSA:1.10.246.40 1 65 7.7E-25 T 12-10-2018 IPR038215 Transposase, Tn5-like, N-terminal domain superfamily M892_22065 f7c6b72e73f28019a8b90890e56799a5 247 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_22065 f7c6b72e73f28019a8b90890e56799a5 247 Gene3D G3DSA:3.40.50.300 8 247 6.1E-76 T 12-10-2018 M892_22065 f7c6b72e73f28019a8b90890e56799a5 247 PIRSF PIRSF039085 7 246 4.8E-104 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 M892_22065 f7c6b72e73f28019a8b90890e56799a5 247 Pfam PF00005 ABC transporter 26 170 2.0E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_22065 f7c6b72e73f28019a8b90890e56799a5 247 SMART SM00382 35 218 2.2E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_22065 f7c6b72e73f28019a8b90890e56799a5 247 SUPERFAMILY SSF52540 11 240 2.48E-77 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_13350 4f8eb99296ceeeb4af96833e9e535bfe 192 Pfam PF03695 Uncharacterised protein family (UPF0149) 12 179 6.8E-35 T 12-10-2018 IPR011978 Uncharacterised protein family UPF0149 M892_13350 4f8eb99296ceeeb4af96833e9e535bfe 192 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 5 190 32.377 T 12-10-2018 IPR011978 Uncharacterised protein family UPF0149 M892_13350 4f8eb99296ceeeb4af96833e9e535bfe 192 SUPERFAMILY SSF101327 6 178 2.75E-45 T 12-10-2018 IPR036255 YgfB-like superfamily M892_13350 4f8eb99296ceeeb4af96833e9e535bfe 192 Gene3D G3DSA:1.20.120.740 4 192 4.8E-47 T 12-10-2018 M892_24170 1fd28aad647fa9e302993655619dff10 361 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 4 170 1.6E-56 T 12-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal M892_24170 1fd28aad647fa9e302993655619dff10 361 Gene3D G3DSA:1.10.3820.10 1 178 6.7E-30 T 12-10-2018 IPR038266 NapC/NirT cytochrome c superfamily M892_24170 1fd28aad647fa9e302993655619dff10 361 SUPERFAMILY SSF48695 25 172 1.56E-37 T 12-10-2018 IPR036280 Multiheme cytochrome superfamily M892_24170 1fd28aad647fa9e302993655619dff10 361 PIRSF PIRSF000014 1 361 6.4E-115 T 12-10-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 M892_15860 ce01adc39431487cbcdfaeb6378b54b5 391 Pfam PF05987 Bacterial protein of unknown function (DUF898) 9 383 2.5E-91 T 12-10-2018 IPR010295 Protein of unknown function DUF898 M892_12950 ecbb799d173e5bcb5273e5a6d4a3c3dc 129 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 104 122 - T 12-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 M892_12950 ecbb799d173e5bcb5273e5a6d4a3c3dc 129 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 127 1.1E-53 T 12-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 M892_12950 ecbb799d173e5bcb5273e5a6d4a3c3dc 129 SUPERFAMILY SSF55298 2 128 4.87E-44 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 M892_12950 ecbb799d173e5bcb5273e5a6d4a3c3dc 129 Pfam PF01042 Endoribonuclease L-PSP 8 127 4.5E-45 T 12-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 M892_12950 ecbb799d173e5bcb5273e5a6d4a3c3dc 129 Gene3D G3DSA:3.30.1330.40 2 129 6.1E-48 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 M892_10040 0c953b329d52c634c02f636ce2cc6b8c 235 Pfam PF03640 Secreted repeat of unknown function 80 120 6.0E-16 T 12-10-2018 IPR005297 Lipoprotein repeat M892_10040 0c953b329d52c634c02f636ce2cc6b8c 235 Pfam PF03640 Secreted repeat of unknown function 138 170 4.3E-9 T 12-10-2018 IPR005297 Lipoprotein repeat M892_10040 0c953b329d52c634c02f636ce2cc6b8c 235 Pfam PF03640 Secreted repeat of unknown function 20 61 9.7E-9 T 12-10-2018 IPR005297 Lipoprotein repeat M892_10040 0c953b329d52c634c02f636ce2cc6b8c 235 Pfam PF03640 Secreted repeat of unknown function 192 233 9.0E-14 T 12-10-2018 IPR005297 Lipoprotein repeat M892_10165 ab0746d11a2ebd4aeb6e55fb2c009964 259 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 3 256 38.803 T 12-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 M892_10165 ab0746d11a2ebd4aeb6e55fb2c009964 259 SUPERFAMILY SSF53335 4 255 4.17E-75 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M892_10165 ab0746d11a2ebd4aeb6e55fb2c009964 259 Gene3D G3DSA:3.40.50.150 57 259 4.7E-75 T 12-10-2018 M892_10165 ab0746d11a2ebd4aeb6e55fb2c009964 259 Gene3D G3DSA:3.40.1630.10 1 56 4.9E-21 T 12-10-2018 M892_10165 ab0746d11a2ebd4aeb6e55fb2c009964 259 Pfam PF04445 Putative SAM-dependent methyltransferase 19 255 2.8E-106 T 12-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 M892_20835 19d2319e5b834f5147555321f1bfdfcd 355 SUPERFAMILY SSF51679 1 353 6.28E-93 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 M892_20835 19d2319e5b834f5147555321f1bfdfcd 355 Pfam PF00296 Luciferase-like monooxygenase 1 320 3.6E-50 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 M892_20835 19d2319e5b834f5147555321f1bfdfcd 355 ProSitePatterns PS00494 Bacterial luciferase subunits signature. 187 212 - T 12-10-2018 IPR018235 Bacterial luciferase, conserved site GO:0047646|GO:0055114 MetaCyc: PWY-7723 M892_20835 19d2319e5b834f5147555321f1bfdfcd 355 PRINTS PR00089 Bacterial luciferase signature 232 250 2.0E-35 T 12-10-2018 IPR002103 Bacterial luciferase/NFP MetaCyc: PWY-7723 M892_20835 19d2319e5b834f5147555321f1bfdfcd 355 PRINTS PR00089 Bacterial luciferase signature 181 196 2.0E-35 T 12-10-2018 IPR002103 Bacterial luciferase/NFP MetaCyc: PWY-7723 M892_20835 19d2319e5b834f5147555321f1bfdfcd 355 PRINTS PR00089 Bacterial luciferase signature 197 212 2.0E-35 T 12-10-2018 IPR002103 Bacterial luciferase/NFP MetaCyc: PWY-7723 M892_20835 19d2319e5b834f5147555321f1bfdfcd 355 PRINTS PR00089 Bacterial luciferase signature 167 178 2.0E-35 T 12-10-2018 IPR002103 Bacterial luciferase/NFP MetaCyc: PWY-7723 M892_20835 19d2319e5b834f5147555321f1bfdfcd 355 PRINTS PR00089 Bacterial luciferase signature 214 231 2.0E-35 T 12-10-2018 IPR002103 Bacterial luciferase/NFP MetaCyc: PWY-7723 M892_20835 19d2319e5b834f5147555321f1bfdfcd 355 Gene3D G3DSA:3.20.20.30 1 355 9.6E-134 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 M892_15920 1a62d684316d4f7ef7329bbe05d75701 282 SUPERFAMILY SSF81324 22 235 5.5E-53 T 12-10-2018 M892_15920 1a62d684316d4f7ef7329bbe05d75701 282 Pfam PF00520 Ion transport protein 24 235 4.1E-31 T 12-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 M892_15920 1a62d684316d4f7ef7329bbe05d75701 282 PRINTS PR00169 Potassium channel signature 84 104 6.9E-37 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 M892_15920 1a62d684316d4f7ef7329bbe05d75701 282 PRINTS PR00169 Potassium channel signature 178 200 6.9E-37 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 M892_15920 1a62d684316d4f7ef7329bbe05d75701 282 PRINTS PR00169 Potassium channel signature 16 44 6.9E-37 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 M892_15920 1a62d684316d4f7ef7329bbe05d75701 282 PRINTS PR00169 Potassium channel signature 120 146 6.9E-37 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 M892_15920 1a62d684316d4f7ef7329bbe05d75701 282 PRINTS PR00169 Potassium channel signature 149 172 6.9E-37 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 M892_15920 1a62d684316d4f7ef7329bbe05d75701 282 PRINTS PR00169 Potassium channel signature 207 233 6.9E-37 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 M892_15920 1a62d684316d4f7ef7329bbe05d75701 282 PRINTS PR00169 Potassium channel signature 58 81 6.9E-37 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 M892_15920 1a62d684316d4f7ef7329bbe05d75701 282 Gene3D G3DSA:1.10.287.70 23 237 2.2E-57 T 12-10-2018 M892_14940 02b82d182ee9a4435609af29575efdd5 343 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 5 326 34.45 T 12-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 M892_14940 02b82d182ee9a4435609af29575efdd5 343 Gene3D G3DSA:3.40.1390.10 1 99 2.5E-31 T 12-10-2018 M892_14940 02b82d182ee9a4435609af29575efdd5 343 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 110 144 9.3E-9 T 12-10-2018 IPR001451 Hexapeptide repeat M892_14940 02b82d182ee9a4435609af29575efdd5 343 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 145 179 4.6E-7 T 12-10-2018 IPR001451 Hexapeptide repeat M892_14940 02b82d182ee9a4435609af29575efdd5 343 SUPERFAMILY SSF51161 32 316 2.43E-82 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily M892_14940 02b82d182ee9a4435609af29575efdd5 343 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 201 233 0.15 T 12-10-2018 IPR001451 Hexapeptide repeat M892_14940 02b82d182ee9a4435609af29575efdd5 343 Gene3D G3DSA:2.160.10.10 100 308 2.9E-62 T 12-10-2018 M892_14940 02b82d182ee9a4435609af29575efdd5 343 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 23 88 6.6E-23 T 12-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 M892_14940 02b82d182ee9a4435609af29575efdd5 343 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 329 8.3E-115 T 12-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 M892_03335 d23618af2ba185250c37a23bc5725e11 518 TIGRFAM TIGR01539 portal_lambda: phage portal protein, lambda family 26 501 3.3E-115 T 12-10-2018 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 M892_03335 d23618af2ba185250c37a23bc5725e11 518 Pfam PF05136 Phage portal protein, lambda family 28 391 6.5E-80 T 12-10-2018 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 M892_22740 9794c56669075784c5c58b2cb5f846f6 712 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 28 712 4.9E-182 T 12-10-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0015232|GO:0015886|GO:0019867 M892_22740 9794c56669075784c5c58b2cb5f846f6 712 Gene3D G3DSA:2.170.130.10 38 167 2.5E-36 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily M892_22740 9794c56669075784c5c58b2cb5f846f6 712 Pfam PF07715 TonB-dependent Receptor Plug Domain 42 152 1.5E-25 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain M892_22740 9794c56669075784c5c58b2cb5f846f6 712 SUPERFAMILY SSF56935 19 712 1.25E-117 T 12-10-2018 M892_22740 9794c56669075784c5c58b2cb5f846f6 712 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 28 712 2.2E-190 T 12-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 M892_22740 9794c56669075784c5c58b2cb5f846f6 712 Pfam PF00593 TonB dependent receptor 269 710 7.0E-64 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel M892_22740 9794c56669075784c5c58b2cb5f846f6 712 Gene3D G3DSA:2.40.170.20 168 712 8.6E-117 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily M892_11105 94fa76eee10d189d936503892038c021 393 Pfam PF07219 HemY protein N-terminus 26 132 4.3E-27 T 12-10-2018 IPR010817 HemY, N-terminal M892_11105 94fa76eee10d189d936503892038c021 393 Gene3D G3DSA:1.25.40.10 205 393 1.5E-12 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_11105 94fa76eee10d189d936503892038c021 393 SUPERFAMILY SSF48452 85 292 2.13E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_11105 94fa76eee10d189d936503892038c021 393 SUPERFAMILY SSF48452 262 393 2.45E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_11105 94fa76eee10d189d936503892038c021 393 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 3 386 2.2E-111 T 12-10-2018 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 M892_12445 74c1a5b33ab130a3202c161469c87e6c 242 ProSitePatterns PS00195 Glutaredoxin active site. 175 191 - T 12-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 M892_12445 74c1a5b33ab130a3202c161469c87e6c 242 Gene3D G3DSA:3.40.30.10 171 242 5.3E-23 T 12-10-2018 M892_12445 74c1a5b33ab130a3202c161469c87e6c 242 Gene3D G3DSA:3.40.30.10 4 165 1.5E-60 T 12-10-2018 M892_12445 74c1a5b33ab130a3202c161469c87e6c 242 SUPERFAMILY SSF52833 2 241 2.16E-45 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M892_12445 74c1a5b33ab130a3202c161469c87e6c 242 Pfam PF08534 Redoxin 5 159 7.3E-32 T 12-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 M892_12445 74c1a5b33ab130a3202c161469c87e6c 242 Pfam PF00462 Glutaredoxin 173 231 1.8E-18 T 12-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 M892_12445 74c1a5b33ab130a3202c161469c87e6c 242 PRINTS PR00160 Glutaredoxin signature 173 191 3.6E-14 T 12-10-2018 IPR014025 Glutaredoxin subgroup M892_12445 74c1a5b33ab130a3202c161469c87e6c 242 PRINTS PR00160 Glutaredoxin signature 228 241 3.6E-14 T 12-10-2018 IPR014025 Glutaredoxin subgroup M892_12445 74c1a5b33ab130a3202c161469c87e6c 242 PRINTS PR00160 Glutaredoxin signature 214 227 3.6E-14 T 12-10-2018 IPR014025 Glutaredoxin subgroup M892_12445 74c1a5b33ab130a3202c161469c87e6c 242 TIGRFAM TIGR02190 GlrX-dom: glutaredoxin-family domain 164 242 2.1E-42 T 12-10-2018 IPR011906 Glutaredoxin domain KEGG: 00480+1.11.1.15 M892_11905 c120c3fd13a4fc17df08e5cdd5b3f67c 430 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 61 74 3.0E-6 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M892_11905 c120c3fd13a4fc17df08e5cdd5b3f67c 430 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 187 200 3.0E-6 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M892_11905 c120c3fd13a4fc17df08e5cdd5b3f67c 430 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 129 147 3.0E-6 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M892_11905 c120c3fd13a4fc17df08e5cdd5b3f67c 430 SUPERFAMILY SSF56672 15 360 8.9E-51 T 12-10-2018 M892_11905 c120c3fd13a4fc17df08e5cdd5b3f67c 430 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 8 350 1.2E-117 T 12-10-2018 IPR030931 Group II intron reverse transcriptase/maturase M892_11905 c120c3fd13a4fc17df08e5cdd5b3f67c 430 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 66 272 5.0E-42 T 12-10-2018 IPR000477 Reverse transcriptase domain M892_11905 c120c3fd13a4fc17df08e5cdd5b3f67c 430 Pfam PF08388 Group II intron, maturase-specific domain 288 356 1.2E-13 T 12-10-2018 IPR013597 Group II intron, maturase-specific M892_07575 f4f802de6dc6dc1bb522dcde17d13677 372 Pfam PF04551 GcpE protein 14 354 2.2E-132 T 12-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 M892_07575 f4f802de6dc6dc1bb522dcde17d13677 372 SUPERFAMILY SSF56014 265 354 1.88E-11 T 12-10-2018 M892_07575 f4f802de6dc6dc1bb522dcde17d13677 372 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 359 35.17 T 12-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 M892_07575 f4f802de6dc6dc1bb522dcde17d13677 372 Gene3D G3DSA:3.30.413.10 262 361 3.8E-25 T 12-10-2018 M892_07575 f4f802de6dc6dc1bb522dcde17d13677 372 SUPERFAMILY SSF51717 15 208 7.85E-11 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 M892_07575 f4f802de6dc6dc1bb522dcde17d13677 372 PIRSF PIRSF004640 1 364 1.0E-147 T 12-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 M892_07575 f4f802de6dc6dc1bb522dcde17d13677 372 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 351 2.7E-127 T 12-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 M892_07575 f4f802de6dc6dc1bb522dcde17d13677 372 Gene3D G3DSA:3.20.20.20 1 261 2.7E-104 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 M892_03020 671c4323cc3abcee053884bdb147adc7 1854 Gene3D G3DSA:2.180.10.10 1194 1628 2.7E-39 T 12-10-2018 M892_03020 671c4323cc3abcee053884bdb147adc7 1854 SUPERFAMILY SSF69318 33 95 5.1E-5 T 12-10-2018 M892_03020 671c4323cc3abcee053884bdb147adc7 1854 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 822 853 8.1E-5 T 12-10-2018 IPR006530 YD repeat M892_03020 671c4323cc3abcee053884bdb147adc7 1854 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 587 622 4.7E-5 T 12-10-2018 IPR006530 YD repeat M892_03020 671c4323cc3abcee053884bdb147adc7 1854 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 574 603 1.1E-5 T 12-10-2018 IPR006530 YD repeat M892_03020 671c4323cc3abcee053884bdb147adc7 1854 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 780 820 3.6E-4 T 12-10-2018 IPR006530 YD repeat M892_03020 671c4323cc3abcee053884bdb147adc7 1854 Gene3D G3DSA:3.90.930.1 484 667 4.4E-5 T 12-10-2018 M892_03020 671c4323cc3abcee053884bdb147adc7 1854 Gene3D G3DSA:3.90.930.1 735 859 3.3E-9 T 12-10-2018 M892_03020 671c4323cc3abcee053884bdb147adc7 1854 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1538 1628 2.1E-19 T 12-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 M892_03020 671c4323cc3abcee053884bdb147adc7 1854 Pfam PF05593 RHS Repeat 569 599 7.7E-5 T 12-10-2018 IPR031325 RHS repeat M892_03500 5d14a5f7fc55df3efc54c817bcf94c25 411 Gene3D G3DSA:1.10.443.10 196 408 1.3E-41 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 M892_03500 5d14a5f7fc55df3efc54c817bcf94c25 411 SUPERFAMILY SSF56349 83 398 8.83E-53 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 M892_03500 5d14a5f7fc55df3efc54c817bcf94c25 411 Pfam PF12167 Arm DNA-binding domain 4 68 2.5E-22 T 12-10-2018 IPR022000 Min27-like integrase, DNA-binding domain M892_03500 5d14a5f7fc55df3efc54c817bcf94c25 411 Gene3D G3DSA:1.10.150.130 79 189 2.3E-9 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal M892_03500 5d14a5f7fc55df3efc54c817bcf94c25 411 Pfam PF00589 Phage integrase family 200 388 2.4E-24 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 M892_03775 24f8db36795cac6c78d77aa0bdf83a24 157 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 96 110 2.4E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_03775 24f8db36795cac6c78d77aa0bdf83a24 157 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 110 126 2.4E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_03775 24f8db36795cac6c78d77aa0bdf83a24 157 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 126 138 2.4E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_03775 24f8db36795cac6c78d77aa0bdf83a24 157 Pfam PF00072 Response regulator receiver domain 1 64 5.0E-15 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_03775 24f8db36795cac6c78d77aa0bdf83a24 157 Pfam PF00196 Bacterial regulatory proteins, luxR family 95 150 6.2E-19 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_03775 24f8db36795cac6c78d77aa0bdf83a24 157 SUPERFAMILY SSF52172 1 80 1.24E-18 T 12-10-2018 IPR011006 CheY-like superfamily M892_03775 24f8db36795cac6c78d77aa0bdf83a24 157 ProSitePatterns PS00622 LuxR-type HTH domain signature. 110 137 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_03775 24f8db36795cac6c78d77aa0bdf83a24 157 SMART SM00421 93 150 2.8E-22 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_03775 24f8db36795cac6c78d77aa0bdf83a24 157 SUPERFAMILY SSF46894 86 156 1.43E-20 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M892_03775 24f8db36795cac6c78d77aa0bdf83a24 157 Gene3D G3DSA:3.40.50.12740 1 156 1.3E-45 T 12-10-2018 M892_15825 87063533e7e149a4a310e377aa9301e6 654 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 526 540 3.9E-26 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 M892_15825 87063533e7e149a4a310e377aa9301e6 654 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 99 112 3.9E-26 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 M892_15825 87063533e7e149a4a310e377aa9301e6 654 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 327 336 3.9E-26 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 M892_15825 87063533e7e149a4a310e377aa9301e6 654 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 408 424 3.9E-26 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 M892_15825 87063533e7e149a4a310e377aa9301e6 654 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 194 212 3.9E-26 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 M892_15825 87063533e7e149a4a310e377aa9301e6 654 Gene3D G3DSA:3.40.50.140 2 157 5.0E-61 T 12-10-2018 M892_15825 87063533e7e149a4a310e377aa9301e6 654 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 616 2.6E-238 T 12-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 M892_15825 87063533e7e149a4a310e377aa9301e6 654 Gene3D G3DSA:1.10.290.10 293 422 2.8E-166 T 12-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 M892_15825 87063533e7e149a4a310e377aa9301e6 654 SUPERFAMILY SSF56712 3 612 3.4E-185 T 12-10-2018 IPR023405 DNA topoisomerase, type IA, core domain M892_15825 87063533e7e149a4a310e377aa9301e6 654 SMART SM00493 2 125 6.5E-28 T 12-10-2018 IPR006171 TOPRIM domain M892_15825 87063533e7e149a4a310e377aa9301e6 654 SMART SM00437 284 563 1.1E-90 T 12-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 M892_15825 87063533e7e149a4a310e377aa9301e6 654 Gene3D G3DSA:1.10.460.10 163 605 2.8E-166 T 12-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 M892_15825 87063533e7e149a4a310e377aa9301e6 654 Gene3D G3DSA:2.70.20.10 218 493 2.8E-166 T 12-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 M892_15825 87063533e7e149a4a310e377aa9301e6 654 Pfam PF01751 Toprim domain 4 132 2.0E-16 T 12-10-2018 IPR006171 TOPRIM domain M892_15825 87063533e7e149a4a310e377aa9301e6 654 Pfam PF01131 DNA topoisomerase 159 598 4.3E-116 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 M892_15825 87063533e7e149a4a310e377aa9301e6 654 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 321 336 - T 12-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 M892_15825 87063533e7e149a4a310e377aa9301e6 654 SMART SM00436 129 224 1.1E-30 T 12-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 M892_15825 87063533e7e149a4a310e377aa9301e6 654 Hamap MF_00953 DNA topoisomerase 3 [topB]. 2 646 64.332 T 12-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 M892_15305 cb0644cc4f72fd28d26d22bfe98d2c50 289 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 264 276 - T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 M892_15305 cb0644cc4f72fd28d26d22bfe98d2c50 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 109 129 4.2E-66 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 M892_15305 cb0644cc4f72fd28d26d22bfe98d2c50 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 90 109 4.2E-66 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 M892_15305 cb0644cc4f72fd28d26d22bfe98d2c50 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 261 286 4.2E-66 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 M892_15305 cb0644cc4f72fd28d26d22bfe98d2c50 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 237 258 4.2E-66 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 M892_15305 cb0644cc4f72fd28d26d22bfe98d2c50 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 216 236 4.2E-66 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 M892_15305 cb0644cc4f72fd28d26d22bfe98d2c50 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 129 148 4.2E-66 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 M892_15305 cb0644cc4f72fd28d26d22bfe98d2c50 289 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 216 231 - T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 M892_15305 cb0644cc4f72fd28d26d22bfe98d2c50 289 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 92 287 6.2E-82 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 M892_15305 cb0644cc4f72fd28d26d22bfe98d2c50 289 Pfam PF00813 FliP family 92 283 7.0E-79 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 M892_15305 cb0644cc4f72fd28d26d22bfe98d2c50 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 209 221 2.5E-17 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 M892_15305 cb0644cc4f72fd28d26d22bfe98d2c50 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 277 287 2.5E-17 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 M892_15305 cb0644cc4f72fd28d26d22bfe98d2c50 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 188 200 2.5E-17 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 M892_15305 cb0644cc4f72fd28d26d22bfe98d2c50 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 148 160 2.5E-17 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 M892_15305 cb0644cc4f72fd28d26d22bfe98d2c50 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 160 174 2.5E-17 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 M892_15305 cb0644cc4f72fd28d26d22bfe98d2c50 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 88 97 2.5E-17 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 M892_13305 7bc1366be3e29fb39d4a8e72dc420b7c 358 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 171 182 - T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 M892_13305 7bc1366be3e29fb39d4a8e72dc420b7c 358 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 100 111 - T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 M892_13305 7bc1366be3e29fb39d4a8e72dc420b7c 358 Pfam PF01116 Fructose-bisphosphate aldolase class-II 17 354 4.0E-89 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 M892_13305 7bc1366be3e29fb39d4a8e72dc420b7c 358 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 14 356 7.6E-110 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 M892_13305 7bc1366be3e29fb39d4a8e72dc420b7c 358 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 4 357 6.0E-179 T 12-10-2018 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 M892_13305 7bc1366be3e29fb39d4a8e72dc420b7c 358 SUPERFAMILY SSF51569 4 356 5.13E-129 T 12-10-2018 M892_13305 7bc1366be3e29fb39d4a8e72dc420b7c 358 Gene3D G3DSA:3.20.20.70 2 358 2.3E-145 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M892_13305 7bc1366be3e29fb39d4a8e72dc420b7c 358 PIRSF PIRSF001359 13 358 8.3E-94 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 M892_20550 3af2d71a1c5f50df263d2ba70e7c18eb 623 Gene3D G3DSA:3.30.450.20 62 173 1.0E-69 T 12-10-2018 M892_20550 3af2d71a1c5f50df263d2ba70e7c18eb 623 Pfam PF00672 HAMP domain 292 343 3.4E-11 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M892_20550 3af2d71a1c5f50df263d2ba70e7c18eb 623 Pfam PF02743 Cache domain 33 254 4.8E-31 T 12-10-2018 IPR033479 Double Cache domain 1 M892_20550 3af2d71a1c5f50df263d2ba70e7c18eb 623 SUPERFAMILY SSF58104 314 623 7.72E-77 T 12-10-2018 M892_20550 3af2d71a1c5f50df263d2ba70e7c18eb 623 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 425 589 1.3E-44 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M892_20550 3af2d71a1c5f50df263d2ba70e7c18eb 623 Gene3D G3DSA:1.10.287.950 291 623 1.1E-72 T 12-10-2018 M892_20550 3af2d71a1c5f50df263d2ba70e7c18eb 623 SUPERFAMILY SSF103190 50 184 3.66E-23 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily M892_20550 3af2d71a1c5f50df263d2ba70e7c18eb 623 SMART SM00304 292 346 1.2E-12 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M892_20550 3af2d71a1c5f50df263d2ba70e7c18eb 623 SMART SM00283 361 622 1.8E-74 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M892_20550 3af2d71a1c5f50df263d2ba70e7c18eb 623 Gene3D G3DSA:3.30.450.20 49 265 1.0E-69 T 12-10-2018 M892_24440 b64edee86ec7bec5dc70e8fac5b097a8 589 SMART SM00304 256 309 0.0044 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M892_24440 b64edee86ec7bec5dc70e8fac5b097a8 589 Gene3D G3DSA:1.10.287.950 255 587 1.6E-65 T 12-10-2018 M892_24440 b64edee86ec7bec5dc70e8fac5b097a8 589 SUPERFAMILY SSF58104 279 586 1.74E-69 T 12-10-2018 M892_24440 b64edee86ec7bec5dc70e8fac5b097a8 589 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 371 551 2.8E-39 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M892_24440 b64edee86ec7bec5dc70e8fac5b097a8 589 SMART SM00283 324 585 2.4E-58 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M892_24440 b64edee86ec7bec5dc70e8fac5b097a8 589 SMART SM01358 25 271 7.8E-4 T 12-10-2018 IPR032255 Helical bimodular sensor domain M892_04475 b7c0d5b4c2c227eaa3d3c9bcf7799f4a 96 ProDom PD020116 PLASMID ACRG TYPE III G SECRETION REGULATOR LCRG LOCUS RESPONSE 2 96 2.0E-41 T 12-10-2018 IPR009863 Type III secretion protein, LcrG M892_04475 b7c0d5b4c2c227eaa3d3c9bcf7799f4a 96 TIGRFAM TIGR02573 LcrG_PcrG: type III secretion protein LcrG 2 96 9.9E-36 T 12-10-2018 IPR009863 Type III secretion protein, LcrG M892_04475 b7c0d5b4c2c227eaa3d3c9bcf7799f4a 96 Pfam PF07216 LcrG protein 1 96 1.4E-35 T 12-10-2018 IPR009863 Type III secretion protein, LcrG M892_03800 0452b87da60114cd79a7528692ccfcc6 359 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 33 352 1.7E-63 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 M892_03800 0452b87da60114cd79a7528692ccfcc6 359 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 344 359 5.9E-5 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 M892_03800 0452b87da60114cd79a7528692ccfcc6 359 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 69 89 5.9E-5 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 M892_03800 0452b87da60114cd79a7528692ccfcc6 359 Gene3D G3DSA:1.10.287.470 91 150 2.8E-67 T 12-10-2018 M892_03800 0452b87da60114cd79a7528692ccfcc6 359 Gene3D G3DSA:2.40.50.100 57 189 2.8E-67 T 12-10-2018 M892_03800 0452b87da60114cd79a7528692ccfcc6 359 Pfam PF13437 HlyD family secretion protein 155 253 1.7E-5 T 12-10-2018 M892_03800 0452b87da60114cd79a7528692ccfcc6 359 Gene3D G3DSA:2.40.420.20 270 350 2.8E-67 T 12-10-2018 M892_03800 0452b87da60114cd79a7528692ccfcc6 359 SUPERFAMILY SSF111369 50 264 3.14E-26 T 12-10-2018 M892_03800 0452b87da60114cd79a7528692ccfcc6 359 Pfam PF13533 Biotin-lipoyl like 62 103 4.1E-12 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain M892_03800 0452b87da60114cd79a7528692ccfcc6 359 Gene3D G3DSA:2.40.30.170 48 269 2.8E-67 T 12-10-2018 M892_24290 007c34603c74222f613257649b17f31c 656 Gene3D G3DSA:3.30.300.30 531 655 6.8E-14 T 12-10-2018 M892_24290 007c34603c74222f613257649b17f31c 656 Pfam PF00501 AMP-binding enzyme 104 532 2.9E-45 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 M892_24290 007c34603c74222f613257649b17f31c 656 ProSitePatterns PS00455 Putative AMP-binding domain signature. 277 288 - T 12-10-2018 IPR020845 AMP-binding, conserved site M892_24290 007c34603c74222f613257649b17f31c 656 Gene3D G3DSA:3.40.50.12780 69 528 6.8E-56 T 12-10-2018 M892_24290 007c34603c74222f613257649b17f31c 656 SUPERFAMILY SSF56801 36 632 9.16E-121 T 12-10-2018 M892_24290 007c34603c74222f613257649b17f31c 656 TIGRFAM TIGR01217 ac_ac_CoA_syn: acetoacetate-CoA ligase 5 653 2.4E-237 T 12-10-2018 IPR005914 Acetoacetyl-CoA synthase GO:0006629|GO:0030729 KEGG: 00280+6.2.1.16|KEGG: 00650+6.2.1.16|Reactome: R-HSA-77111 M892_09020 fbcfa3298f3d17c32d2ed11540115529 205 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 14 193 2.2E-79 T 12-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 M892_09020 fbcfa3298f3d17c32d2ed11540115529 205 Pfam PF01583 Adenylylsulphate kinase 31 185 3.9E-70 T 12-10-2018 M892_09020 fbcfa3298f3d17c32d2ed11540115529 205 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 30 202 38.256 T 12-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 M892_09020 fbcfa3298f3d17c32d2ed11540115529 205 SUPERFAMILY SSF52540 25 195 1.18E-36 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_09020 fbcfa3298f3d17c32d2ed11540115529 205 Gene3D G3DSA:3.40.50.300 9 205 4.0E-76 T 12-10-2018 M892_22175 4bd7e478881d459b492d85fb278553e1 80 Pfam PF09932 Uncharacterized conserved protein (DUF2164) 2 75 1.1E-28 T 12-10-2018 IPR018680 Protein of unknown function DUF2164 M892_02720 aaed01819cec141f8c0ba5a92cf2e4c7 295 PIRSF PIRSF006334 14 295 1.8E-108 T 12-10-2018 M892_02720 aaed01819cec141f8c0ba5a92cf2e4c7 295 Hamap MF_01558 Cytidine deaminase [cdd]. 1 293 49.349 T 12-10-2018 IPR020797 Cytidine deaminase, bacteria GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 M892_02720 aaed01819cec141f8c0ba5a92cf2e4c7 295 Gene3D G3DSA:3.40.140.10 29 179 2.5E-43 T 12-10-2018 M892_02720 aaed01819cec141f8c0ba5a92cf2e4c7 295 SUPERFAMILY SSF53927 152 287 1.02E-36 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 M892_02720 aaed01819cec141f8c0ba5a92cf2e4c7 295 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 64 142 7.3E-12 T 12-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain M892_02720 aaed01819cec141f8c0ba5a92cf2e4c7 295 Pfam PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region 157 277 1.1E-41 T 12-10-2018 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 M892_02720 aaed01819cec141f8c0ba5a92cf2e4c7 295 SUPERFAMILY SSF53927 1 147 4.68E-41 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 M892_02720 aaed01819cec141f8c0ba5a92cf2e4c7 295 Gene3D G3DSA:3.40.140.10 180 295 2.0E-26 T 12-10-2018 M892_02720 aaed01819cec141f8c0ba5a92cf2e4c7 295 TIGRFAM TIGR01355 cyt_deam_dimer: cytidine deaminase 29 292 6.8E-100 T 12-10-2018 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 M892_02720 aaed01819cec141f8c0ba5a92cf2e4c7 295 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 102 136 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 M892_05565 4cffa8a32476da0ea3ef2fa7492ff9c9 244 Gene3D G3DSA:3.40.1280.10 96 244 9.4E-40 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal M892_05565 4cffa8a32476da0ea3ef2fa7492ff9c9 244 Pfam PF00588 SpoU rRNA Methylase family 102 236 9.1E-29 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 M892_05565 4cffa8a32476da0ea3ef2fa7492ff9c9 244 Gene3D G3DSA:3.30.1330.30 1 94 9.6E-18 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like M892_05565 4cffa8a32476da0ea3ef2fa7492ff9c9 244 SUPERFAMILY SSF55315 4 93 5.89E-13 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like M892_05565 4cffa8a32476da0ea3ef2fa7492ff9c9 244 SUPERFAMILY SSF75217 96 243 1.5E-33 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases M892_09785 ab3f8dfd067927be9d26b153305a9525 164 SUPERFAMILY SSF103054 86 163 1.02E-24 T 12-10-2018 IPR023229 Type II secretion system protein M, periplasmic domain superfamily M892_09785 ab3f8dfd067927be9d26b153305a9525 164 Gene3D G3DSA:3.30.1360.100 86 164 9.5E-31 T 12-10-2018 M892_09785 ab3f8dfd067927be9d26b153305a9525 164 PIRSF PIRSF006291 3 163 2.0E-40 T 12-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 M892_09785 ab3f8dfd067927be9d26b153305a9525 164 Pfam PF04612 Type II secretion system (T2SS), protein M 7 163 1.5E-54 T 12-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 M892_01865 d9d8738b5fa479114d53e475123211c7 324 PIRSF PIRSF000006 1 322 1.3E-108 T 12-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III M892_01865 d9d8738b5fa479114d53e475123211c7 324 SUPERFAMILY SSF46626 238 321 3.1E-22 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M892_01865 d9d8738b5fa479114d53e475123211c7 324 Gene3D G3DSA:1.10.760.10 209 295 6.5E-74 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M892_01865 d9d8738b5fa479114d53e475123211c7 324 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 115 321 8.0E-58 T 12-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III M892_01865 d9d8738b5fa479114d53e475123211c7 324 SUPERFAMILY SSF46626 55 237 4.3E-30 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M892_01865 d9d8738b5fa479114d53e475123211c7 324 Gene3D G3DSA:1.10.760.10 143 318 6.5E-74 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M892_01865 d9d8738b5fa479114d53e475123211c7 324 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 38 83 4.0E-23 T 12-10-2018 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal M892_01865 d9d8738b5fa479114d53e475123211c7 324 Gene3D G3DSA:1.20.58.1490 1 94 1.7E-34 T 12-10-2018 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily M892_01865 d9d8738b5fa479114d53e475123211c7 324 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 154 227 1.7E-13 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_01865 d9d8738b5fa479114d53e475123211c7 324 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 241 315 4.1E-11 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_01865 d9d8738b5fa479114d53e475123211c7 324 PRINTS PR00605 Class IC cytochrome C signature 293 315 4.5E-6 T 12-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 M892_01865 d9d8738b5fa479114d53e475123211c7 324 PRINTS PR00605 Class IC cytochrome C signature 164 175 4.5E-6 T 12-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 M892_09225 b67c847ad62a5c40d2c05037ccb34615 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 12-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_09225 b67c847ad62a5c40d2c05037ccb34615 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 3.3E-18 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_09225 b67c847ad62a5c40d2c05037ccb34615 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 3.3E-18 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_09225 b67c847ad62a5c40d2c05037ccb34615 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 3.3E-18 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_09225 b67c847ad62a5c40d2c05037ccb34615 103 SUPERFAMILY SSF54999 5 101 7.06E-37 T 12-10-2018 IPR036838 Ribosomal protein S10 domain superfamily M892_09225 b67c847ad62a5c40d2c05037ccb34615 103 Gene3D G3DSA:3.30.70.600 1 103 2.2E-38 T 12-10-2018 IPR036838 Ribosomal protein S10 domain superfamily M892_09225 b67c847ad62a5c40d2c05037ccb34615 103 SMART SM01403 7 101 6.6E-56 T 12-10-2018 IPR027486 Ribosomal protein S10 domain M892_09225 b67c847ad62a5c40d2c05037ccb34615 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 2.8E-35 T 12-10-2018 IPR027486 Ribosomal protein S10 domain M892_09225 b67c847ad62a5c40d2c05037ccb34615 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 26.839 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_09225 b67c847ad62a5c40d2c05037ccb34615 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.1E-45 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_18015 09c1f4adccac05d71f91831d83b9a7c9 123 Pfam PF05656 Protein of unknown function (DUF805) 12 119 6.0E-35 T 12-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 M892_00975 efa214a83967d4f151dc94869233d151 242 SUPERFAMILY SSF53098 1 211 3.49E-14 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_00975 efa214a83967d4f151dc94869233d151 242 Pfam PF01609 Transposase DDE domain 3 156 2.0E-12 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_08535 c86d3008d3d09d5e07072356cca83726 445 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 23 440 1.0E-106 T 12-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 M892_08535 c86d3008d3d09d5e07072356cca83726 445 Gene3D G3DSA:1.20.1600.10 23 445 1.1E-117 T 12-10-2018 M892_08535 c86d3008d3d09d5e07072356cca83726 445 Pfam PF02321 Outer membrane efflux protein 243 427 2.3E-32 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 M892_08535 c86d3008d3d09d5e07072356cca83726 445 Pfam PF02321 Outer membrane efflux protein 25 219 5.5E-27 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 M892_08535 c86d3008d3d09d5e07072356cca83726 445 SUPERFAMILY SSF56954 1 433 1.57E-90 T 12-10-2018 M892_09610 5d51083f2c0061107bebf2663cb6639a 288 Pfam PF08340 Domain of unknown function (DUF1732) 204 288 1.5E-34 T 12-10-2018 IPR013551 Domain of unknown function DUF1732 M892_09610 5d51083f2c0061107bebf2663cb6639a 288 Pfam PF03755 YicC-like family, N-terminal region 2 154 8.0E-44 T 12-10-2018 IPR013527 YicC-like, N-terminal M892_09610 5d51083f2c0061107bebf2663cb6639a 288 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 288 2.7E-118 T 12-10-2018 IPR005229 Conserved hypothetical protein CHP00255 M892_13360 68caf55334798c9e509e07be8aa7ed22 402 Gene3D G3DSA:3.30.9.50 80 270 1.2E-123 T 12-10-2018 M892_13360 68caf55334798c9e509e07be8aa7ed22 402 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 12-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 M892_13360 68caf55334798c9e509e07be8aa7ed22 402 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 6 391 8.8E-138 T 12-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 M892_13360 68caf55334798c9e509e07be8aa7ed22 402 Gene3D G3DSA:3.50.50.60 6 339 1.2E-123 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_13360 68caf55334798c9e509e07be8aa7ed22 402 SUPERFAMILY SSF51905 5 385 1.31E-58 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_13360 68caf55334798c9e509e07be8aa7ed22 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 1.8E-18 T 12-10-2018 M892_13360 68caf55334798c9e509e07be8aa7ed22 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 1.8E-18 T 12-10-2018 M892_13360 68caf55334798c9e509e07be8aa7ed22 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 1.8E-18 T 12-10-2018 M892_13360 68caf55334798c9e509e07be8aa7ed22 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 1.8E-18 T 12-10-2018 M892_13360 68caf55334798c9e509e07be8aa7ed22 402 Pfam PF01494 FAD binding domain 5 347 3.5E-28 T 12-10-2018 IPR002938 FAD-binding domain GO:0071949 M892_09775 aaf79306105809c807e8d520675be412 275 Gene3D G3DSA:3.40.190.80 161 264 3.5E-26 T 12-10-2018 M892_09775 aaf79306105809c807e8d520675be412 275 Pfam PF00459 Inositol monophosphatase family 7 253 3.9E-51 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 M892_09775 aaf79306105809c807e8d520675be412 275 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 10 260 4.0E-106 T 12-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 M892_09775 aaf79306105809c807e8d520675be412 275 Gene3D G3DSA:3.30.540.10 6 160 2.7E-45 T 12-10-2018 M892_09775 aaf79306105809c807e8d520675be412 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 65 81 9.0E-6 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 M892_09775 aaf79306105809c807e8d520675be412 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 89 105 9.0E-6 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 M892_09775 aaf79306105809c807e8d520675be412 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 43 63 9.0E-6 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 M892_09775 aaf79306105809c807e8d520675be412 275 SUPERFAMILY SSF56655 6 272 7.07E-78 T 12-10-2018 M892_09775 aaf79306105809c807e8d520675be412 275 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 10 262 39.242 T 12-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 M892_00265 c2923cbc2b7219b25cf954e8793df7f7 481 Pfam PF11066 Protein of unknown function (DUF2867) 332 465 1.3E-12 T 12-10-2018 IPR021295 Protein of unknown function DUF2867 M892_00265 c2923cbc2b7219b25cf954e8793df7f7 481 Pfam PF13460 NAD(P)H-binding 8 149 2.1E-14 T 12-10-2018 IPR016040 NAD(P)-binding domain M892_00265 c2923cbc2b7219b25cf954e8793df7f7 481 SUPERFAMILY SSF51735 1 295 1.72E-44 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_00265 c2923cbc2b7219b25cf954e8793df7f7 481 Gene3D G3DSA:3.40.50.720 2 292 4.9E-34 T 12-10-2018 M892_24330 2813d0a83005daa0c3c506b22f7e6144 358 SUPERFAMILY SSF50952 17 350 2.48E-39 T 12-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 M892_24330 2813d0a83005daa0c3c506b22f7e6144 358 Pfam PF07995 Glucose / Sorbosone dehydrogenase 30 353 1.1E-111 T 12-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase M892_24330 2813d0a83005daa0c3c506b22f7e6144 358 Gene3D G3DSA:2.120.10.30 15 357 3.5E-100 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like M892_07565 4bdddad6c8fdb553293a672f61f67d56 204 SUPERFAMILY SSF48452 89 188 1.25E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_07565 4bdddad6c8fdb553293a672f61f67d56 204 Pfam PF09976 Tetratricopeptide repeat-like domain 15 204 5.4E-56 T 12-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 M892_07565 4bdddad6c8fdb553293a672f61f67d56 204 Gene3D G3DSA:1.25.40.10 26 203 2.5E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_07565 4bdddad6c8fdb553293a672f61f67d56 204 PIRSF PIRSF006170 1 204 3.4E-53 T 12-10-2018 IPR026039 Uncharacterised protein family UPF0070 M892_19005 98186d4615adb389f13344a618037f35 514 SUPERFAMILY SSF48173 229 500 8.5E-63 T 12-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 M892_19005 98186d4615adb389f13344a618037f35 514 Gene3D G3DSA:1.25.40.80 132 323 8.1E-102 T 12-10-2018 M892_19005 98186d4615adb389f13344a618037f35 514 Pfam PF04244 Deoxyribodipyrimidine photo-lyase-related protein 7 224 7.2E-68 T 12-10-2018 IPR007357 Deoxyribodipyrimidine photolyase-related protein M892_19005 98186d4615adb389f13344a618037f35 514 Gene3D G3DSA:1.10.10.1710 448 513 2.2E-24 T 12-10-2018 M892_19005 98186d4615adb389f13344a618037f35 514 Gene3D G3DSA:3.40.50.620 8 230 8.1E-102 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M892_19005 98186d4615adb389f13344a618037f35 514 Gene3D G3DSA:1.10.579.10 327 447 1.3E-54 T 12-10-2018 M892_24780 f1e6b78c6d65c898403f40e7c70d371b 618 Gene3D G3DSA:1.20.1250.20 6 415 7.7E-22 T 12-10-2018 M892_24780 f1e6b78c6d65c898403f40e7c70d371b 618 SUPERFAMILY SSF69593 378 601 9.42E-30 T 12-10-2018 M892_24780 f1e6b78c6d65c898403f40e7c70d371b 618 Pfam PF01553 Acyltransferase 435 563 5.1E-25 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 M892_24780 f1e6b78c6d65c898403f40e7c70d371b 618 Pfam PF07690 Major Facilitator Superfamily 39 379 7.0E-13 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 M892_24780 f1e6b78c6d65c898403f40e7c70d371b 618 SMART SM00563 450 566 1.3E-31 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 M892_24780 f1e6b78c6d65c898403f40e7c70d371b 618 SUPERFAMILY SSF103473 6 420 1.31E-24 T 12-10-2018 IPR036259 MFS transporter superfamily M892_24320 5d0e3bf8a88569a4b44de01de8a291fd 216 Gene3D G3DSA:3.40.50.880 1 216 9.3E-89 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M892_24320 5d0e3bf8a88569a4b44de01de8a291fd 216 PIRSF PIRSF006320 1 216 2.1E-107 T 12-10-2018 IPR026041 Glyoxalase ElbB M892_24320 5d0e3bf8a88569a4b44de01de8a291fd 216 SUPERFAMILY SSF52317 1 215 4.09E-61 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M892_04090 e9f81d457d50b96af0f19f3123e48e6a 436 Gene3D G3DSA:3.50.50.60 4 279 5.7E-28 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_04090 e9f81d457d50b96af0f19f3123e48e6a 436 Pfam PF01593 Flavin containing amine oxidoreductase 16 269 5.1E-17 T 12-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 M892_04090 e9f81d457d50b96af0f19f3123e48e6a 436 SUPERFAMILY SSF51905 7 418 1.94E-50 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_09410 fccb70d1a817cc89e8ae3797648f90bf 897 Pfam PF06251 Capsule biosynthesis GfcC 670 870 2.2E-11 T 12-10-2018 IPR010425 Domain of unknown function DUF1017 M892_09410 fccb70d1a817cc89e8ae3797648f90bf 897 Pfam PF02563 Polysaccharide biosynthesis/export protein 117 179 7.5E-14 T 12-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 M892_09410 fccb70d1a817cc89e8ae3797648f90bf 897 Pfam PF10531 SLBB domain 281 327 3.3E-11 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M892_09410 fccb70d1a817cc89e8ae3797648f90bf 897 Pfam PF10531 SLBB domain 198 246 5.7E-8 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M892_09410 fccb70d1a817cc89e8ae3797648f90bf 897 Pfam PF10531 SLBB domain 565 610 1.5E-7 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M892_09410 fccb70d1a817cc89e8ae3797648f90bf 897 Gene3D G3DSA:3.30.1950.10 122 189 1.2E-5 T 12-10-2018 M892_09410 fccb70d1a817cc89e8ae3797648f90bf 897 Gene3D G3DSA:3.10.560.10 358 450 4.3E-8 T 12-10-2018 M892_09410 fccb70d1a817cc89e8ae3797648f90bf 897 Gene3D G3DSA:3.10.560.10 190 276 1.5E-17 T 12-10-2018 M892_09410 fccb70d1a817cc89e8ae3797648f90bf 897 Gene3D G3DSA:3.10.560.10 790 868 6.7E-11 T 12-10-2018 M892_09410 fccb70d1a817cc89e8ae3797648f90bf 897 Gene3D G3DSA:3.10.560.10 550 648 1.9E-12 T 12-10-2018 M892_09410 fccb70d1a817cc89e8ae3797648f90bf 897 Gene3D G3DSA:3.10.560.10 277 357 1.3E-13 T 12-10-2018 M892_23830 6ed56b2df5b3aff67f5932d78899e8ee 506 SMART SM00052 252 498 6.3E-89 T 12-10-2018 IPR001633 EAL domain M892_23830 6ed56b2df5b3aff67f5932d78899e8ee 506 Pfam PF00563 EAL domain 260 493 4.2E-61 T 12-10-2018 IPR001633 EAL domain M892_23830 6ed56b2df5b3aff67f5932d78899e8ee 506 Gene3D G3DSA:3.20.20.450 251 503 1.9E-78 T 12-10-2018 IPR035919 EAL domain superfamily M892_23830 6ed56b2df5b3aff67f5932d78899e8ee 506 Pfam PF12792 CSS motif domain associated with EAL 43 226 7.1E-24 T 12-10-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain M892_23830 6ed56b2df5b3aff67f5932d78899e8ee 506 SUPERFAMILY SSF141868 259 501 4.05E-74 T 12-10-2018 IPR035919 EAL domain superfamily M892_04015 b93eda205752d0d64d38e46ace60bcf5 346 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 4 345 52.871 T 12-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 M892_04015 b93eda205752d0d64d38e46ace60bcf5 346 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 6 343 2.0E-117 T 12-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 M892_04015 b93eda205752d0d64d38e46ace60bcf5 346 Pfam PF00155 Aminotransferase class I and II 42 337 2.9E-53 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 M892_04015 b93eda205752d0d64d38e46ace60bcf5 346 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 206 215 - T 12-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 M892_04015 b93eda205752d0d64d38e46ace60bcf5 346 Gene3D G3DSA:3.90.1150.10 4 336 1.9E-120 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M892_04015 b93eda205752d0d64d38e46ace60bcf5 346 Gene3D G3DSA:3.40.640.10 49 253 1.9E-120 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M892_04015 b93eda205752d0d64d38e46ace60bcf5 346 SUPERFAMILY SSF53383 9 343 4.95E-73 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M892_11830 2e3eb661be664d7261c68114582afff8 435 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 434 3.7E-179 T 12-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 M892_11830 2e3eb661be664d7261c68114582afff8 435 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 367 4.4E-145 T 12-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 M892_11830 2e3eb661be664d7261c68114582afff8 435 PIRSF PIRSF004539 1 435 1.2E-175 T 12-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 M892_21400 eeb08e3fb255ac63c366e22813ee1aca 255 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 18 249 1.1E-42 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_21400 eeb08e3fb255ac63c366e22813ee1aca 255 PRINTS PR00123 ATP synthase A subunit signature 90 106 2.9E-14 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_21400 eeb08e3fb255ac63c366e22813ee1aca 255 PRINTS PR00123 ATP synthase A subunit signature 235 250 2.9E-14 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_21400 eeb08e3fb255ac63c366e22813ee1aca 255 PRINTS PR00123 ATP synthase A subunit signature 188 210 2.9E-14 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_21400 eeb08e3fb255ac63c366e22813ee1aca 255 ProSitePatterns PS00449 ATP synthase a subunit signature. 191 200 - T 12-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_21400 eeb08e3fb255ac63c366e22813ee1aca 255 SUPERFAMILY SSF81336 85 248 3.66E-44 T 12-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_21400 eeb08e3fb255ac63c366e22813ee1aca 255 Gene3D G3DSA:1.20.120.220 81 255 5.5E-61 T 12-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_21400 eeb08e3fb255ac63c366e22813ee1aca 255 Pfam PF00119 ATP synthase A chain 32 248 3.2E-56 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_21400 eeb08e3fb255ac63c366e22813ee1aca 255 Hamap MF_01393 ATP synthase subunit a [atpB]. 11 255 15.398 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_19835 04945dbbf9866b78060136fb82b6c329 180 Pfam PF06042 Nucleotidyltransferase 22 178 5.5E-62 T 12-10-2018 IPR009267 Putative nucleotidyltransferase M892_05670 c0440e74a243543ae0fc4b6dce8802f6 224 Pfam PF13817 IS66 C-terminal element 184 220 2.4E-8 T 12-10-2018 IPR039552 Transposase IS66, C-terminal M892_05670 c0440e74a243543ae0fc4b6dce8802f6 224 Pfam PF03050 Transposase IS66 family 3 177 8.4E-65 T 12-10-2018 IPR004291 Transposase, IS66 M892_03115 e61ca1a4ea8e8b9a97d0a7825e5e172c 456 Pfam PF00939 Sodium:sulfate symporter transmembrane region 38 456 2.4E-57 T 12-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 M892_03115 e61ca1a4ea8e8b9a97d0a7825e5e172c 456 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 38 456 3.0E-109 T 12-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 M892_03115 e61ca1a4ea8e8b9a97d0a7825e5e172c 456 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 406 422 - T 12-10-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 M892_21730 e2fb7f2dee857aed5f1565d71d375df4 159 SUPERFAMILY SSF52540 1 149 1.83E-20 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_21730 e2fb7f2dee857aed5f1565d71d375df4 159 Gene3D G3DSA:3.40.50.300 2 158 7.6E-23 T 12-10-2018 M892_21730 e2fb7f2dee857aed5f1565d71d375df4 159 Pfam PF13671 AAA domain 6 146 1.0E-20 T 12-10-2018 M892_11625 c1bed834e3aec3733e92eacf3abcfe13 724 SUPERFAMILY SSF53383 143 575 2.57E-106 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M892_11625 c1bed834e3aec3733e92eacf3abcfe13 724 Gene3D G3DSA:3.90.100.10 608 724 2.5E-46 T 12-10-2018 M892_11625 c1bed834e3aec3733e92eacf3abcfe13 724 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 583 713 3.0E-46 T 12-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 M892_11625 c1bed834e3aec3733e92eacf3abcfe13 724 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 143 558 1.6E-189 T 12-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 M892_11625 c1bed834e3aec3733e92eacf3abcfe13 724 Gene3D G3DSA:3.90.1150.10 438 607 1.4E-70 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M892_11625 c1bed834e3aec3733e92eacf3abcfe13 724 Gene3D G3DSA:3.40.640.10 143 437 4.2E-91 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M892_11625 c1bed834e3aec3733e92eacf3abcfe13 724 SUPERFAMILY SSF55904 581 721 8.11E-43 T 12-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 M892_11625 c1bed834e3aec3733e92eacf3abcfe13 724 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 375 389 - T 12-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 M892_11625 c1bed834e3aec3733e92eacf3abcfe13 724 Gene3D G3DSA:3.40.50.2300 14 142 1.2E-52 T 12-10-2018 M892_11625 c1bed834e3aec3733e92eacf3abcfe13 724 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 27 137 1.3E-28 T 12-10-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 M892_11625 c1bed834e3aec3733e92eacf3abcfe13 724 PIRSF PIRSF009393 10 724 5.0E-289 T 12-10-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 M892_06790 291e2dc59afc9a2a20e0c06cb372a1ec 363 SUPERFAMILY SSF52540 3 301 1.53E-83 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_06790 291e2dc59afc9a2a20e0c06cb372a1ec 363 Gene3D G3DSA:3.10.20.30 48 362 4.2E-150 T 12-10-2018 IPR012675 Beta-grasp domain superfamily M892_06790 291e2dc59afc9a2a20e0c06cb372a1ec 363 Gene3D G3DSA:1.10.150.300 120 200 4.2E-150 T 12-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 M892_06790 291e2dc59afc9a2a20e0c06cb372a1ec 363 SUPERFAMILY SSF81271 279 363 5.01E-36 T 12-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 M892_06790 291e2dc59afc9a2a20e0c06cb372a1ec 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 4.4E-34 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 M892_06790 291e2dc59afc9a2a20e0c06cb372a1ec 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 4.4E-34 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 M892_06790 291e2dc59afc9a2a20e0c06cb372a1ec 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 4.4E-34 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 M892_06790 291e2dc59afc9a2a20e0c06cb372a1ec 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 4.4E-34 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 M892_06790 291e2dc59afc9a2a20e0c06cb372a1ec 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 4.3E-169 T 12-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 M892_06790 291e2dc59afc9a2a20e0c06cb372a1ec 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 1.2E-38 T 12-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 M892_06790 291e2dc59afc9a2a20e0c06cb372a1ec 363 Gene3D G3DSA:3.40.50.300 4 278 4.2E-150 T 12-10-2018 M892_06790 291e2dc59afc9a2a20e0c06cb372a1ec 363 Pfam PF01926 50S ribosome-binding GTPase 5 121 1.2E-21 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 M892_06790 291e2dc59afc9a2a20e0c06cb372a1ec 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 45.017 T 12-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 M892_06790 291e2dc59afc9a2a20e0c06cb372a1ec 363 PIRSF PIRSF006641 1 363 2.3E-157 T 12-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 M892_00295 6d3909303811ddc4277a427b24c181e7 86 Gene3D G3DSA:1.10.740.10 17 85 1.8E-26 T 12-10-2018 IPR014737 Transposase, Tn5-like, C-terminal M892_00295 6d3909303811ddc4277a427b24c181e7 86 Pfam PF02281 Transposase Tn5 dimerisation domain 27 81 2.3E-15 T 12-10-2018 IPR003201 Transposase Tn5, dimerisation M892_00295 6d3909303811ddc4277a427b24c181e7 86 SUPERFAMILY SSF53098 20 85 3.11E-17 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_00485 c92864f7a88ea10a5930cb06104160c4 85 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 72 1.8E-15 T 12-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM M892_00485 c92864f7a88ea10a5930cb06104160c4 85 SUPERFAMILY SSF143120 1 75 1.48E-16 T 12-10-2018 IPR036165 YefM-like superfamily M892_00485 c92864f7a88ea10a5930cb06104160c4 85 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 5 56 4.5E-11 T 12-10-2018 M892_00485 c92864f7a88ea10a5930cb06104160c4 85 Gene3D G3DSA:3.40.1620.10 1 40 1.1E-5 T 12-10-2018 M892_15330 272750dad712a55cc41f541420e170fe 503 Gene3D G3DSA:1.20.120.1380 265 474 4.7E-57 T 12-10-2018 M892_15330 272750dad712a55cc41f541420e170fe 503 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 141 378 9.2E-70 T 12-10-2018 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 M892_15330 272750dad712a55cc41f541420e170fe 503 Gene3D G3DSA:3.40.50.300 285 471 4.7E-57 T 12-10-2018 M892_15330 272750dad712a55cc41f541420e170fe 503 SUPERFAMILY SSF52540 286 478 2.32E-33 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_15330 272750dad712a55cc41f541420e170fe 503 SMART SM00382 289 442 8.9E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_15330 272750dad712a55cc41f541420e170fe 503 SMART SM00962 290 483 2.1E-63 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 M892_15330 272750dad712a55cc41f541420e170fe 503 Pfam PF00448 SRP54-type protein, GTPase domain 292 480 1.4E-38 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 M892_25040 f56883fb50e97bab311bb849adbb6f28 329 Gene3D G3DSA:3.90.180.10 11 324 3.9E-69 T 12-10-2018 M892_25040 f56883fb50e97bab311bb849adbb6f28 329 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 90 3.7E-6 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 M892_25040 f56883fb50e97bab311bb849adbb6f28 329 SUPERFAMILY SSF51735 118 243 4.17E-35 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_25040 f56883fb50e97bab311bb849adbb6f28 329 SUPERFAMILY SSF50129 1 139 1.16E-28 T 12-10-2018 IPR011032 GroES-like superfamily M892_25040 f56883fb50e97bab311bb849adbb6f28 329 Pfam PF00107 Zinc-binding dehydrogenase 154 244 1.5E-19 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 M892_25040 f56883fb50e97bab311bb849adbb6f28 329 SMART SM00829 8 325 1.4E-13 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 M892_25040 f56883fb50e97bab311bb849adbb6f28 329 Gene3D G3DSA:3.40.50.720 126 271 3.9E-69 T 12-10-2018 M892_17875 2d80c2edf5bdac5929022dd14849db53 394 Gene3D G3DSA:3.30.930.10 1 291 1.1E-104 T 12-10-2018 M892_17875 2d80c2edf5bdac5929022dd14849db53 394 SUPERFAMILY SSF52954 293 392 2.11E-20 T 12-10-2018 M892_17875 2d80c2edf5bdac5929022dd14849db53 394 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 2 391 1.1E-128 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 M892_17875 2d80c2edf5bdac5929022dd14849db53 394 Gene3D G3DSA:3.40.50.800 293 394 5.4E-18 T 12-10-2018 IPR036621 Anticodon-binding domain superfamily M892_17875 2d80c2edf5bdac5929022dd14849db53 394 PRINTS PR01047 Threonyl-tRNA synthetase signature 226 254 6.2E-46 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 M892_17875 2d80c2edf5bdac5929022dd14849db53 394 PRINTS PR01047 Threonyl-tRNA synthetase signature 296 308 6.2E-46 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 M892_17875 2d80c2edf5bdac5929022dd14849db53 394 PRINTS PR01047 Threonyl-tRNA synthetase signature 269 282 6.2E-46 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 M892_17875 2d80c2edf5bdac5929022dd14849db53 394 PRINTS PR01047 Threonyl-tRNA synthetase signature 124 147 6.2E-46 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 M892_17875 2d80c2edf5bdac5929022dd14849db53 394 PRINTS PR01047 Threonyl-tRNA synthetase signature 91 119 6.2E-46 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 M892_17875 2d80c2edf5bdac5929022dd14849db53 394 SUPERFAMILY SSF55681 4 288 1.7E-87 T 12-10-2018 M892_17875 2d80c2edf5bdac5929022dd14849db53 394 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 83 289 2.8E-37 T 12-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 M892_17875 2d80c2edf5bdac5929022dd14849db53 394 Pfam PF03129 Anticodon binding domain 304 391 7.0E-15 T 12-10-2018 IPR004154 Anticodon-binding M892_23770 3bfaa1dfc17afcc56d5f9a798b256a1a 158 Gene3D G3DSA:2.60.40.1890 37 151 8.5E-39 T 12-10-2018 IPR036182 Copper chaperone PCuAC superfamily M892_23770 3bfaa1dfc17afcc56d5f9a798b256a1a 158 SUPERFAMILY SSF110087 5 148 9.68E-50 T 12-10-2018 IPR036182 Copper chaperone PCuAC superfamily M892_23770 3bfaa1dfc17afcc56d5f9a798b256a1a 158 Pfam PF04314 Copper chaperone PCu(A)C 33 141 4.3E-39 T 12-10-2018 IPR007410 Copper chaperone PCuAC M892_08870 e3aad298f1f3d8c38241881c09c62f66 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 1.3E-44 T 12-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_08870 e3aad298f1f3d8c38241881c09c62f66 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 12-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_08870 e3aad298f1f3d8c38241881c09c62f66 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 27.497 T 12-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_08870 e3aad298f1f3d8c38241881c09c62f66 103 SUPERFAMILY SSF141091 1 102 9.94E-39 T 12-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_08870 e3aad298f1f3d8c38241881c09c62f66 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 2.8E-40 T 12-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_10465 c58e7c7031e060f850ce4dcd92f26b29 326 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 3 326 2.2E-139 T 12-10-2018 IPR014188 Acrylyl-CoA reductase AcuI M892_10465 c58e7c7031e060f850ce4dcd92f26b29 326 Gene3D G3DSA:3.90.180.10 17 325 1.9E-123 T 12-10-2018 M892_10465 c58e7c7031e060f850ce4dcd92f26b29 326 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 87 1.6E-5 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 M892_10465 c58e7c7031e060f850ce4dcd92f26b29 326 Pfam PF00107 Zinc-binding dehydrogenase 159 275 6.0E-11 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 M892_10465 c58e7c7031e060f850ce4dcd92f26b29 326 Gene3D G3DSA:3.40.50.720 126 294 1.9E-123 T 12-10-2018 M892_10465 c58e7c7031e060f850ce4dcd92f26b29 326 SUPERFAMILY SSF51735 116 289 9.84E-35 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_10465 c58e7c7031e060f850ce4dcd92f26b29 326 SUPERFAMILY SSF50129 2 145 4.11E-44 T 12-10-2018 IPR011032 GroES-like superfamily M892_10465 c58e7c7031e060f850ce4dcd92f26b29 326 SMART SM00829 13 324 2.1E-5 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 M892_04825 eda5ec7c11154cb9de52c7ed7ba4d96c 306 Pfam PF13737 Transposase DDE domain 19 129 5.7E-45 T 12-10-2018 IPR025668 Transposase DDE domain M892_11155 8cf74f5fabf7afac40665a42047a69a6 313 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 18 306 1.5E-107 T 12-10-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007059|GO:0015074|GO:0051301 M892_11155 8cf74f5fabf7afac40665a42047a69a6 313 SUPERFAMILY SSF56349 116 302 1.62E-52 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 M892_11155 8cf74f5fabf7afac40665a42047a69a6 313 Gene3D G3DSA:1.10.443.10 121 298 1.7E-56 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 M892_11155 8cf74f5fabf7afac40665a42047a69a6 313 SUPERFAMILY SSF47823 16 107 2.16E-11 T 12-10-2018 M892_11155 8cf74f5fabf7afac40665a42047a69a6 313 Pfam PF00589 Phage integrase family 122 290 1.6E-48 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 M892_11155 8cf74f5fabf7afac40665a42047a69a6 313 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 15 304 54.581 T 12-10-2018 IPR023009 Tyrosine recombinase XerC/XerD M892_11155 8cf74f5fabf7afac40665a42047a69a6 313 Gene3D G3DSA:1.10.150.130 14 108 1.3E-16 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal M892_11155 8cf74f5fabf7afac40665a42047a69a6 313 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 17 100 8.1E-20 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 M892_18315 fa302ef39f3b4f73f2a73fae2f0b79fe 147 Gene3D G3DSA:1.20.120.10 24 146 8.0E-25 T 12-10-2018 M892_18315 fa302ef39f3b4f73f2a73fae2f0b79fe 147 Pfam PF01322 Cytochrome C' 28 144 3.6E-22 T 12-10-2018 IPR002321 Cytochrome c, class II GO:0005506|GO:0009055|GO:0020037 M892_18315 fa302ef39f3b4f73f2a73fae2f0b79fe 147 SUPERFAMILY SSF47175 23 145 1.3E-29 T 12-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 M892_12945 5dd77a6550b9ef67f76e44b863ebb82c 404 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 66 234 2.5E-36 T 12-10-2018 IPR000477 Reverse transcriptase domain M892_12945 5dd77a6550b9ef67f76e44b863ebb82c 404 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 187 200 2.6E-5 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M892_12945 5dd77a6550b9ef67f76e44b863ebb82c 404 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 61 74 2.6E-5 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M892_12945 5dd77a6550b9ef67f76e44b863ebb82c 404 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 129 147 2.6E-5 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M892_12945 5dd77a6550b9ef67f76e44b863ebb82c 404 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 8 240 2.5E-91 T 12-10-2018 IPR030931 Group II intron reverse transcriptase/maturase M892_12945 5dd77a6550b9ef67f76e44b863ebb82c 404 SUPERFAMILY SSF56672 15 334 2.76E-42 T 12-10-2018 M892_12945 5dd77a6550b9ef67f76e44b863ebb82c 404 Pfam PF08388 Group II intron, maturase-specific domain 262 330 1.5E-14 T 12-10-2018 IPR013597 Group II intron, maturase-specific M892_25170 963b6b0483622980421defba810624e9 342 SUPERFAMILY SSF51556 1 341 2.28E-146 T 12-10-2018 IPR032466 Metal-dependent hydrolase M892_25170 963b6b0483622980421defba810624e9 342 Hamap MF_00219 Dihydroorotase [pyrC]. 2 342 46.744 T 12-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 M892_25170 963b6b0483622980421defba810624e9 342 Gene3D G3DSA:3.20.20.140 2 342 5.9E-111 T 12-10-2018 M892_25170 963b6b0483622980421defba810624e9 342 Pfam PF01979 Amidohydrolase family 11 309 1.2E-18 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 M892_25170 963b6b0483622980421defba810624e9 342 ProSitePatterns PS00482 Dihydroorotase signature 1. 11 19 - T 12-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 M892_25170 963b6b0483622980421defba810624e9 342 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 4 342 1.8E-137 T 12-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 M892_25170 963b6b0483622980421defba810624e9 342 ProSitePatterns PS00483 Dihydroorotase signature 2. 244 255 - T 12-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 M892_25170 963b6b0483622980421defba810624e9 342 PIRSF PIRSF001237 1 342 7.4E-143 T 12-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 M892_10565 b9cd1162764220f24b140580f261fcbb 540 PRINTS PR00701 60kDa inner membrane protein signature 214 232 2.3E-99 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 M892_10565 b9cd1162764220f24b140580f261fcbb 540 PRINTS PR00701 60kDa inner membrane protein signature 321 341 2.3E-99 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 M892_10565 b9cd1162764220f24b140580f261fcbb 540 PRINTS PR00701 60kDa inner membrane protein signature 412 435 2.3E-99 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 M892_10565 b9cd1162764220f24b140580f261fcbb 540 PRINTS PR00701 60kDa inner membrane protein signature 161 181 2.3E-99 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 M892_10565 b9cd1162764220f24b140580f261fcbb 540 PRINTS PR00701 60kDa inner membrane protein signature 2 23 2.3E-99 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 M892_10565 b9cd1162764220f24b140580f261fcbb 540 PRINTS PR00701 60kDa inner membrane protein signature 496 519 2.3E-99 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 M892_10565 b9cd1162764220f24b140580f261fcbb 540 PRINTS PR00701 60kDa inner membrane protein signature 249 264 2.3E-99 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 M892_10565 b9cd1162764220f24b140580f261fcbb 540 PRINTS PR00701 60kDa inner membrane protein signature 459 481 2.3E-99 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 M892_10565 b9cd1162764220f24b140580f261fcbb 540 PRINTS PR00701 60kDa inner membrane protein signature 71 92 2.3E-99 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 M892_10565 b9cd1162764220f24b140580f261fcbb 540 PRINTS PR01900 YidC translocation/secretion protein signature 465 480 1.8E-26 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 M892_10565 b9cd1162764220f24b140580f261fcbb 540 PRINTS PR01900 YidC translocation/secretion protein signature 336 352 1.8E-26 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 M892_10565 b9cd1162764220f24b140580f261fcbb 540 PRINTS PR01900 YidC translocation/secretion protein signature 485 509 1.8E-26 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 M892_10565 b9cd1162764220f24b140580f261fcbb 540 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 532 25.907 T 12-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 M892_10565 b9cd1162764220f24b140580f261fcbb 540 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 349 3.8E-111 T 12-10-2018 IPR028053 Membrane insertase YidC, N-terminal M892_10565 b9cd1162764220f24b140580f261fcbb 540 Pfam PF14849 YidC periplasmic domain 65 339 4.7E-83 T 12-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain M892_10565 b9cd1162764220f24b140580f261fcbb 540 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 350 529 8.5E-74 T 12-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_10565 b9cd1162764220f24b140580f261fcbb 540 Gene3D G3DSA:2.70.98.90 61 330 3.4E-89 T 12-10-2018 IPR038221 YidC, periplasmic domain superfamily M892_10565 b9cd1162764220f24b140580f261fcbb 540 Pfam PF02096 60Kd inner membrane protein 351 530 9.6E-64 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 M892_19430 6da2be9117362ba67ef3780c7917eba4 160 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 2 152 26.785 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 M892_19430 6da2be9117362ba67ef3780c7917eba4 160 Pfam PF01625 Peptide methionine sulfoxide reductase 4 147 3.6E-43 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 M892_19430 6da2be9117362ba67ef3780c7917eba4 160 SUPERFAMILY SSF55068 2 149 6.41E-49 T 12-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 M892_19430 6da2be9117362ba67ef3780c7917eba4 160 Gene3D G3DSA:3.30.1060.10 1 155 3.7E-41 T 12-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 M892_19635 86f6deb0a83e59601ca2fd17afcbc506 218 Gene3D G3DSA:1.10.357.10 1 217 4.6E-60 T 12-10-2018 M892_19635 86f6deb0a83e59601ca2fd17afcbc506 218 SUPERFAMILY SSF48498 92 207 2.85E-5 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily M892_19635 86f6deb0a83e59601ca2fd17afcbc506 218 SUPERFAMILY SSF46689 8 85 1.69E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_19635 86f6deb0a83e59601ca2fd17afcbc506 218 Pfam PF00440 Bacterial regulatory proteins, tetR family 25 65 1.5E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M892_16600 3a275ed17420b05cd572c0c21a0ae7ff 434 Pfam PF00480 ROK family 117 419 6.5E-71 T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 M892_16600 3a275ed17420b05cd572c0c21a0ae7ff 434 ProSitePatterns PS01125 ROK family signature. 247 274 - T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 M892_16600 3a275ed17420b05cd572c0c21a0ae7ff 434 Gene3D G3DSA:3.30.420.40 120 416 2.7E-109 T 12-10-2018 M892_16600 3a275ed17420b05cd572c0c21a0ae7ff 434 Gene3D G3DSA:3.30.420.40 237 406 2.7E-109 T 12-10-2018 M892_16600 3a275ed17420b05cd572c0c21a0ae7ff 434 SUPERFAMILY SSF53067 115 424 7.21E-55 T 12-10-2018 M892_16600 3a275ed17420b05cd572c0c21a0ae7ff 434 Gene3D G3DSA:1.10.10.10 30 110 5.6E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_16600 3a275ed17420b05cd572c0c21a0ae7ff 434 SUPERFAMILY SSF46785 39 105 4.3E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_01855 b75d1265f094779844a159c897973ff9 206 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 9 188 1.8E-80 T 12-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO M892_01855 b75d1265f094779844a159c897973ff9 206 SUPERFAMILY SSF46626 21 202 4.58E-28 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M892_01855 b75d1265f094779844a159c897973ff9 206 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 9 187 1.5E-81 T 12-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO M892_01855 b75d1265f094779844a159c897973ff9 206 Gene3D G3DSA:1.10.760.10 46 206 1.1E-70 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M892_14140 3c2b177b75e3b1836f7b523fdeb12148 137 SMART SM00347 23 124 9.1E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M892_14140 3c2b177b75e3b1836f7b523fdeb12148 137 Pfam PF12802 MarR family 30 88 7.0E-14 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M892_14140 3c2b177b75e3b1836f7b523fdeb12148 137 Gene3D G3DSA:1.10.10.10 4 137 5.6E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_14140 3c2b177b75e3b1836f7b523fdeb12148 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 3.8E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M892_14140 3c2b177b75e3b1836f7b523fdeb12148 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 3.8E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M892_14140 3c2b177b75e3b1836f7b523fdeb12148 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 3.8E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M892_14140 3c2b177b75e3b1836f7b523fdeb12148 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 3.8E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M892_14140 3c2b177b75e3b1836f7b523fdeb12148 137 SUPERFAMILY SSF46785 13 136 7.96E-24 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_07675 fcc1f01baf1201bf18ab60a5158a7f05 378 Gene3D G3DSA:3.20.20.105 1 370 9.3E-175 T 12-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 M892_07675 fcc1f01baf1201bf18ab60a5158a7f05 378 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 3 366 57.449 T 12-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 M892_07675 fcc1f01baf1201bf18ab60a5158a7f05 378 Pfam PF01702 Queuine tRNA-ribosyltransferase 128 363 6.7E-97 T 12-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 M892_07675 fcc1f01baf1201bf18ab60a5158a7f05 378 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 5 371 8.4E-187 T 12-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 M892_07675 fcc1f01baf1201bf18ab60a5158a7f05 378 SUPERFAMILY SSF51713 3 366 1.96E-164 T 12-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 M892_07675 fcc1f01baf1201bf18ab60a5158a7f05 378 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 5 371 3.7E-178 T 12-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 M892_25130 9d1582d2f04a517a11181fb29f7f71d9 201 Gene3D G3DSA:3.80.10.10 28 198 9.4E-7 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily M892_17890 242f5be6946911d4b7ff03b639c07d40 284 Pfam PF12146 Serine aminopeptidase, S33 83 183 1.6E-11 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 M892_17890 242f5be6946911d4b7ff03b639c07d40 284 Gene3D G3DSA:3.40.50.1820 64 280 1.3E-27 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_17890 242f5be6946911d4b7ff03b639c07d40 284 SUPERFAMILY SSF53474 40 267 3.65E-28 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_22510 04e9dc3eb385b7373ac7a9a01c71ed60 132 SUPERFAMILY SSF53098 1 120 7.59E-22 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_18480 c75d24440762bdd93e7a3bead41b29ab 326 Gene3D G3DSA:1.10.443.10 106 311 8.6E-33 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 M892_18480 c75d24440762bdd93e7a3bead41b29ab 326 Pfam PF00589 Phage integrase family 113 299 5.9E-21 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 M892_18480 c75d24440762bdd93e7a3bead41b29ab 326 Gene3D G3DSA:1.10.150.130 1 105 9.1E-18 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal M892_18480 c75d24440762bdd93e7a3bead41b29ab 326 SUPERFAMILY SSF56349 6 304 3.53E-53 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 M892_01230 b54cd0cf7c7fd31a5e52c5feaab1759f 96 Pfam PF01527 Transposase 6 78 3.9E-9 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 M892_01230 b54cd0cf7c7fd31a5e52c5feaab1759f 96 SUPERFAMILY SSF48295 5 61 1.31E-14 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 M892_27325 3b6e6ca8605eeb3b50d73e2641262105 336 Pfam PF00665 Integrase core domain 128 244 1.9E-18 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 M892_27325 3b6e6ca8605eeb3b50d73e2641262105 336 Gene3D G3DSA:3.30.420.10 125 295 7.5E-10 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M892_27325 3b6e6ca8605eeb3b50d73e2641262105 336 SUPERFAMILY SSF53098 128 298 4.17E-36 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_16900 3b6e6ca8605eeb3b50d73e2641262105 336 Pfam PF00665 Integrase core domain 128 244 1.9E-18 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 M892_16900 3b6e6ca8605eeb3b50d73e2641262105 336 Gene3D G3DSA:3.30.420.10 125 295 7.5E-10 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M892_16900 3b6e6ca8605eeb3b50d73e2641262105 336 SUPERFAMILY SSF53098 128 298 4.17E-36 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_15050 fbc41f913b4d5b494efce3d9147c0b84 191 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 35 187 6.4E-81 T 12-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 M892_15050 fbc41f913b4d5b494efce3d9147c0b84 191 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 37.638 T 12-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 M892_15050 fbc41f913b4d5b494efce3d9147c0b84 191 Pfam PF13580 SIS domain 12 146 8.3E-30 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 M892_15050 fbc41f913b4d5b494efce3d9147c0b84 191 SUPERFAMILY SSF53697 1 189 1.88E-51 T 12-10-2018 M892_15050 fbc41f913b4d5b494efce3d9147c0b84 191 Gene3D G3DSA:3.40.50.10490 1 191 3.2E-70 T 12-10-2018 M892_15235 a601969f1d96ab33c38bfcce49c76491 345 Pfam PF13188 PAS domain 18 72 3.6E-6 T 12-10-2018 IPR000014 PAS domain M892_15235 a601969f1d96ab33c38bfcce49c76491 345 SUPERFAMILY SSF55874 177 336 5.76E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_15235 a601969f1d96ab33c38bfcce49c76491 345 Gene3D G3DSA:3.30.450.20 9 108 2.5E-5 T 12-10-2018 M892_15235 a601969f1d96ab33c38bfcce49c76491 345 SMART SM00387 231 337 4.1E-29 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_15235 a601969f1d96ab33c38bfcce49c76491 345 PRINTS PR00344 Bacterial sensor protein C-terminal signature 286 296 9.1E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_15235 a601969f1d96ab33c38bfcce49c76491 345 PRINTS PR00344 Bacterial sensor protein C-terminal signature 297 315 9.1E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_15235 a601969f1d96ab33c38bfcce49c76491 345 PRINTS PR00344 Bacterial sensor protein C-terminal signature 321 334 9.1E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_15235 a601969f1d96ab33c38bfcce49c76491 345 PRINTS PR00344 Bacterial sensor protein C-terminal signature 268 282 9.1E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_15235 a601969f1d96ab33c38bfcce49c76491 345 SUPERFAMILY SSF47384 117 187 5.69E-10 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M892_15235 a601969f1d96ab33c38bfcce49c76491 345 Pfam PF00512 His Kinase A (phospho-acceptor) domain 122 186 3.1E-10 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M892_15235 a601969f1d96ab33c38bfcce49c76491 345 SUPERFAMILY SSF55785 18 85 7.21E-7 T 12-10-2018 IPR035965 PAS domain superfamily M892_15235 a601969f1d96ab33c38bfcce49c76491 345 Gene3D G3DSA:3.30.565.10 190 342 4.8E-38 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_15235 a601969f1d96ab33c38bfcce49c76491 345 Gene3D G3DSA:1.10.287.130 109 185 2.9E-9 T 12-10-2018 M892_15235 a601969f1d96ab33c38bfcce49c76491 345 SMART SM00388 122 188 4.7E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M892_15235 a601969f1d96ab33c38bfcce49c76491 345 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 234 336 5.7E-21 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_01005 87c085b4519752c338dddc5ac07e0251 117 Pfam PF00893 Small Multidrug Resistance protein 12 101 8.1E-25 T 12-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 M892_01005 87c085b4519752c338dddc5ac07e0251 117 Gene3D G3DSA:1.10.3730.20 9 117 9.1E-34 T 12-10-2018 M892_01005 87c085b4519752c338dddc5ac07e0251 117 SUPERFAMILY SSF103481 14 112 1.7E-18 T 12-10-2018 M892_01085 beab7b7b18efd1c059ed9299d97dae76 458 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 441 1.9E-151 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 M892_01085 beab7b7b18efd1c059ed9299d97dae76 458 PRINTS PR00175 Sodium/alanine symporter signature 212 231 5.3E-52 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 M892_01085 beab7b7b18efd1c059ed9299d97dae76 458 PRINTS PR00175 Sodium/alanine symporter signature 184 202 5.3E-52 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 M892_01085 beab7b7b18efd1c059ed9299d97dae76 458 PRINTS PR00175 Sodium/alanine symporter signature 92 114 5.3E-52 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 M892_01085 beab7b7b18efd1c059ed9299d97dae76 458 PRINTS PR00175 Sodium/alanine symporter signature 307 325 5.3E-52 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 M892_01085 beab7b7b18efd1c059ed9299d97dae76 458 PRINTS PR00175 Sodium/alanine symporter signature 353 375 5.3E-52 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 M892_01085 beab7b7b18efd1c059ed9299d97dae76 458 PRINTS PR00175 Sodium/alanine symporter signature 412 432 5.3E-52 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 M892_01085 beab7b7b18efd1c059ed9299d97dae76 458 Pfam PF01235 Sodium:alanine symporter family 54 449 1.5E-138 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 M892_01085 beab7b7b18efd1c059ed9299d97dae76 458 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 92 107 - T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 M892_26205 c9ef34920686b797d484d55df2619200 466 SUPERFAMILY SSF53383 60 462 1.9E-66 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M892_26205 c9ef34920686b797d484d55df2619200 466 Gene3D G3DSA:3.90.1150.10 70 455 3.7E-72 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M892_26205 c9ef34920686b797d484d55df2619200 466 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 267 286 - T 12-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site M892_26205 c9ef34920686b797d484d55df2619200 466 Gene3D G3DSA:3.40.640.10 83 353 3.7E-72 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M892_26205 c9ef34920686b797d484d55df2619200 466 Pfam PF00266 Aminotransferase class-V 114 396 1.2E-32 T 12-10-2018 IPR000192 Aminotransferase class V domain M892_27090 2981fdf7ae0d2b52b3d1b5c4706abd70 244 Gene3D G3DSA:1.10.260.40 1 74 6.1E-13 T 12-10-2018 M892_27090 2981fdf7ae0d2b52b3d1b5c4706abd70 244 SUPERFAMILY SSF47413 4 73 5.63E-10 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 M892_27090 2981fdf7ae0d2b52b3d1b5c4706abd70 244 SMART SM00530 8 72 4.2E-5 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 M892_27090 2981fdf7ae0d2b52b3d1b5c4706abd70 244 Pfam PF13560 Helix-turn-helix domain 5 72 6.8E-8 T 12-10-2018 M892_18855 be37d27dc53241375a886bcd114c29ff 288 Gene3D G3DSA:1.10.10.60 177 228 8.9E-10 T 12-10-2018 M892_18855 be37d27dc53241375a886bcd114c29ff 288 SMART SM00342 196 279 3.4E-22 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M892_18855 be37d27dc53241375a886bcd114c29ff 288 Pfam PF12833 Helix-turn-helix domain 202 280 1.1E-17 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M892_18855 be37d27dc53241375a886bcd114c29ff 288 SUPERFAMILY SSF46689 232 283 1.08E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_18855 be37d27dc53241375a886bcd114c29ff 288 Gene3D G3DSA:2.60.120.10 4 95 8.6E-6 T 12-10-2018 IPR014710 RmlC-like jelly roll fold M892_18855 be37d27dc53241375a886bcd114c29ff 288 Gene3D G3DSA:1.10.10.60 229 285 4.6E-16 T 12-10-2018 M892_18855 be37d27dc53241375a886bcd114c29ff 288 SUPERFAMILY SSF46689 180 227 8.96E-6 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_18855 be37d27dc53241375a886bcd114c29ff 288 SUPERFAMILY SSF51215 28 98 1.57E-6 T 12-10-2018 IPR037923 Transcription regulator HTH-like M892_02500 4bbd7b68e15e16b2cc4307ceff4a2777 289 Hamap MF_02093 Probable beta-carotene 15,15'-dioxygenase. 14 282 11.794 T 12-10-2018 IPR022270 Beta-carotene 15,15'-monooxygenase, Brp/Blh family GO:0016702|GO:0055114 KEGG: 00830+1.13.11.63|MetaCyc: PWY-6857 M892_02500 4bbd7b68e15e16b2cc4307ceff4a2777 289 TIGRFAM TIGR03753 blh_monoox: beta-carotene 15,15'-monooxygenase, Brp/Blh family 36 277 5.6E-56 T 12-10-2018 IPR022270 Beta-carotene 15,15'-monooxygenase, Brp/Blh family GO:0016702|GO:0055114 KEGG: 00830+1.13.11.63|MetaCyc: PWY-6857 M892_02500 4bbd7b68e15e16b2cc4307ceff4a2777 289 Pfam PF15461 Beta-carotene 15,15'-dioxygenase 39 276 5.5E-32 T 12-10-2018 IPR022270 Beta-carotene 15,15'-monooxygenase, Brp/Blh family GO:0016702|GO:0055114 KEGG: 00830+1.13.11.63|MetaCyc: PWY-6857 M892_27515 d15be3ab626fd050b6f32453f68e6712 1043 SUPERFAMILY SSF81935 17 188 2.75E-62 T 12-10-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 M892_27515 d15be3ab626fd050b6f32453f68e6712 1043 Gene3D G3DSA:3.40.309.10 813 1005 1.9E-148 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 M892_27515 d15be3ab626fd050b6f32453f68e6712 1043 Gene3D G3DSA:3.20.20.220 150 525 5.0E-131 T 12-10-2018 M892_27515 d15be3ab626fd050b6f32453f68e6712 1043 SUPERFAMILY SSF53720 552 1035 5.11E-126 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 M892_27515 d15be3ab626fd050b6f32453f68e6712 1043 Pfam PF01619 Proline dehydrogenase 197 490 2.2E-93 T 12-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 M892_27515 d15be3ab626fd050b6f32453f68e6712 1043 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 73 187 1.8E-45 T 12-10-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 M892_27515 d15be3ab626fd050b6f32453f68e6712 1043 Gene3D G3DSA:3.40.605.10 548 1035 1.9E-148 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 M892_27515 d15be3ab626fd050b6f32453f68e6712 1043 PIRSF PIRSF000197 3 1043 0.0 T 12-10-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 M892_27515 d15be3ab626fd050b6f32453f68e6712 1043 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 838 849 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 M892_27515 d15be3ab626fd050b6f32453f68e6712 1043 SUPERFAMILY SSF51730 190 532 5.89E-116 T 12-10-2018 IPR029041 FAD-linked oxidoreductase-like M892_27515 d15be3ab626fd050b6f32453f68e6712 1043 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 526 1035 8.3E-245 T 12-10-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 M892_27515 d15be3ab626fd050b6f32453f68e6712 1043 Pfam PF00171 Aldehyde dehydrogenase family 585 1034 7.4E-118 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 M892_16195 55b6a9eee631fd2f9e2a58df1d86d306 514 Pfam PF13005 zinc-finger binding domain of transposase IS66 120 164 1.1E-16 T 12-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 M892_16195 55b6a9eee631fd2f9e2a58df1d86d306 514 Pfam PF13007 Transposase C of IS166 homeodomain 42 112 2.2E-14 T 12-10-2018 IPR024463 Transposase TnpC, homeodomain M892_16195 55b6a9eee631fd2f9e2a58df1d86d306 514 Pfam PF13817 IS66 C-terminal element 474 510 7.6E-8 T 12-10-2018 IPR039552 Transposase IS66, C-terminal M892_16195 55b6a9eee631fd2f9e2a58df1d86d306 514 Pfam PF03050 Transposase IS66 family 184 467 4.9E-101 T 12-10-2018 IPR004291 Transposase, IS66 M892_16005 55b6a9eee631fd2f9e2a58df1d86d306 514 Pfam PF13005 zinc-finger binding domain of transposase IS66 120 164 1.1E-16 T 12-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 M892_16005 55b6a9eee631fd2f9e2a58df1d86d306 514 Pfam PF13007 Transposase C of IS166 homeodomain 42 112 2.2E-14 T 12-10-2018 IPR024463 Transposase TnpC, homeodomain M892_16005 55b6a9eee631fd2f9e2a58df1d86d306 514 Pfam PF13817 IS66 C-terminal element 474 510 7.6E-8 T 12-10-2018 IPR039552 Transposase IS66, C-terminal M892_16005 55b6a9eee631fd2f9e2a58df1d86d306 514 Pfam PF03050 Transposase IS66 family 184 467 4.9E-101 T 12-10-2018 IPR004291 Transposase, IS66 M892_17765 08165ea66ee188f3ebb91328092a9cd4 514 Pfam PF13005 zinc-finger binding domain of transposase IS66 120 164 1.5E-16 T 12-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 M892_17765 08165ea66ee188f3ebb91328092a9cd4 514 Pfam PF03050 Transposase IS66 family 184 467 2.0E-101 T 12-10-2018 IPR004291 Transposase, IS66 M892_17765 08165ea66ee188f3ebb91328092a9cd4 514 Pfam PF13007 Transposase C of IS166 homeodomain 42 112 2.2E-14 T 12-10-2018 IPR024463 Transposase TnpC, homeodomain M892_17765 08165ea66ee188f3ebb91328092a9cd4 514 Pfam PF13817 IS66 C-terminal element 474 510 7.6E-8 T 12-10-2018 IPR039552 Transposase IS66, C-terminal M892_18080 19e41da25dd83b4963f9976ad5650d56 655 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 564 579 3.9E-5 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 M892_18080 19e41da25dd83b4963f9976ad5650d56 655 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 503 523 3.9E-5 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 M892_18080 19e41da25dd83b4963f9976ad5650d56 655 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 445 469 3.9E-5 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 M892_18080 19e41da25dd83b4963f9976ad5650d56 655 Gene3D G3DSA:2.120.10.30 51 233 4.1E-8 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like M892_18080 19e41da25dd83b4963f9976ad5650d56 655 SUPERFAMILY SSF53474 389 647 1.26E-69 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_18080 19e41da25dd83b4963f9976ad5650d56 655 Gene3D G3DSA:3.40.50.1820 293 652 7.1E-81 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_18080 19e41da25dd83b4963f9976ad5650d56 655 SUPERFAMILY SSF82171 54 390 4.51E-22 T 12-10-2018 M892_18080 19e41da25dd83b4963f9976ad5650d56 655 Pfam PF00326 Prolyl oligopeptidase family 434 647 1.1E-47 T 12-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 M892_07880 11910750d2e9860d52c641aa9569de64 242 Gene3D G3DSA:3.60.140.10 1 240 6.8E-87 T 12-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily M892_07880 11910750d2e9860d52c641aa9569de64 242 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 25 240 4.7E-61 T 12-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase M892_07880 11910750d2e9860d52c641aa9569de64 242 SUPERFAMILY SSF64438 3 241 2.56E-82 T 12-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic M892_07880 11910750d2e9860d52c641aa9569de64 242 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 19 239 1.1E-71 T 12-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase M892_00660 ed565888058a846f416df89a8a204cc7 426 PIRSF PIRSF006066 1 426 4.8E-146 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 M892_00660 ed565888058a846f416df89a8a204cc7 426 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 422 5.9E-125 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 M892_00660 ed565888058a846f416df89a8a204cc7 426 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 417 8.2E-111 T 12-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit M892_19010 36705b47a236daaa2d5630951a8a8ba4 235 Gene3D G3DSA:3.40.50.720 3 235 8.9E-48 T 12-10-2018 M892_19010 36705b47a236daaa2d5630951a8a8ba4 235 SUPERFAMILY SSF51735 3 235 1.62E-50 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_19010 36705b47a236daaa2d5630951a8a8ba4 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 196 216 1.7E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_19010 36705b47a236daaa2d5630951a8a8ba4 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 1.7E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_19010 36705b47a236daaa2d5630951a8a8ba4 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 1.7E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_19010 36705b47a236daaa2d5630951a8a8ba4 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 66 77 1.7E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_19010 36705b47a236daaa2d5630951a8a8ba4 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 1.7E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_19010 36705b47a236daaa2d5630951a8a8ba4 235 Pfam PF00106 short chain dehydrogenase 3 191 1.1E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_22365 e7863979a559bc3335fb99c13095a885 172 SUPERFAMILY SSF141452 3 168 1.96E-38 T 12-10-2018 IPR036624 Hcp1-like superfamily M892_22365 e7863979a559bc3335fb99c13095a885 172 Pfam PF05638 Type VI secretion system effector, Hcp 6 155 3.3E-29 T 12-10-2018 IPR008514 Type VI secretion system effector, Hcp M892_22365 e7863979a559bc3335fb99c13095a885 172 Gene3D G3DSA:2.30.110.20 2 172 2.7E-61 T 12-10-2018 IPR036624 Hcp1-like superfamily M892_22365 e7863979a559bc3335fb99c13095a885 172 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 168 1.2E-63 T 12-10-2018 IPR008514 Type VI secretion system effector, Hcp M892_16365 924d778825982ff26935a0359a3c6f24 459 Gene3D G3DSA:3.90.350.10 66 347 5.8E-80 T 12-10-2018 IPR014736 Transposase, Tn5-like, core M892_16365 924d778825982ff26935a0359a3c6f24 459 Gene3D G3DSA:1.10.740.10 348 458 1.7E-41 T 12-10-2018 IPR014737 Transposase, Tn5-like, C-terminal M892_16365 924d778825982ff26935a0359a3c6f24 459 SUPERFAMILY SSF53098 1 458 4.32E-131 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_16365 924d778825982ff26935a0359a3c6f24 459 Gene3D G3DSA:1.10.246.40 1 65 9.7E-25 T 12-10-2018 IPR038215 Transposase, Tn5-like, N-terminal domain superfamily M892_16365 924d778825982ff26935a0359a3c6f24 459 Pfam PF01609 Transposase DDE domain 223 357 4.8E-5 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_16365 924d778825982ff26935a0359a3c6f24 459 Pfam PF14706 Transposase DNA-binding 9 65 5.0E-17 T 12-10-2018 IPR014735 Transposase, Tn5-like, N-terminal M892_16365 924d778825982ff26935a0359a3c6f24 459 Pfam PF02281 Transposase Tn5 dimerisation domain 369 454 1.9E-17 T 12-10-2018 IPR003201 Transposase Tn5, dimerisation M892_15940 97384e9b7b645ce5a547fc3565a9d36f 247 SUPERFAMILY SSF51735 8 212 1.98E-20 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_15940 97384e9b7b645ce5a547fc3565a9d36f 247 Gene3D G3DSA:3.40.50.720 21 240 1.5E-20 T 12-10-2018 M892_15940 97384e9b7b645ce5a547fc3565a9d36f 247 Pfam PF00106 short chain dehydrogenase 27 210 5.3E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_03950 4e4b231b67f3f28cca17bc83743414d2 247 Pfam PF08388 Group II intron, maturase-specific domain 105 173 6.2E-15 T 12-10-2018 IPR013597 Group II intron, maturase-specific M892_03950 4e4b231b67f3f28cca17bc83743414d2 247 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 6 89 4.4E-16 T 12-10-2018 IPR000477 Reverse transcriptase domain M892_03950 4e4b231b67f3f28cca17bc83743414d2 247 SUPERFAMILY SSF56672 5 177 8.9E-19 T 12-10-2018 M892_00330 833f6b90d70745954376428eb091acbd 400 Pfam PF07055 Enoyl reductase FAD binding domain 326 389 1.3E-30 T 12-10-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 M892_00330 833f6b90d70745954376428eb091acbd 400 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 82 317 1.1E-111 T 12-10-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 M892_00330 833f6b90d70745954376428eb091acbd 400 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 395 57.286 T 12-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 M892_00330 833f6b90d70745954376428eb091acbd 400 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 80 2.5E-37 T 12-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 M892_00330 833f6b90d70745954376428eb091acbd 400 Gene3D G3DSA:3.40.50.720 1 398 6.5E-180 T 12-10-2018 M892_08385 04c5d317b3a4bca579230e119093aacd 398 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 24 380 1.2E-128 T 12-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 M892_08385 04c5d317b3a4bca579230e119093aacd 398 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 339 363 - T 12-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 M892_08385 04c5d317b3a4bca579230e119093aacd 398 Hamap MF_00913 Probable peptidoglycan glycosyltransferase FtsW [ftsW]. 22 388 41.183 T 12-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 M892_08385 04c5d317b3a4bca579230e119093aacd 398 Pfam PF01098 Cell cycle protein 26 381 1.6E-113 T 12-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 M892_09925 0669fbf4613f1f918b76a7818abf031f 463 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 14 463 7.8E-209 T 12-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 M892_09925 0669fbf4613f1f918b76a7818abf031f 463 Pfam PF04055 Radical SAM superfamily 63 234 3.1E-18 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 M892_09925 0669fbf4613f1f918b76a7818abf031f 463 PIRSF PIRSF000167 9 460 5.5E-175 T 12-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 M892_09925 0669fbf4613f1f918b76a7818abf031f 463 Gene3D G3DSA:3.80.30.20 7 369 3.5E-138 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe M892_09925 0669fbf4613f1f918b76a7818abf031f 463 Gene3D G3DSA:1.10.10.920 370 463 5.0E-35 T 12-10-2018 M892_09925 0669fbf4613f1f918b76a7818abf031f 463 SMART SM00729 58 278 3.1E-54 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 M892_09925 0669fbf4613f1f918b76a7818abf031f 463 Pfam PF06969 HemN C-terminal domain 369 437 2.2E-12 T 12-10-2018 IPR010723 HemN, C-terminal M892_09925 0669fbf4613f1f918b76a7818abf031f 463 SUPERFAMILY SSF102114 12 450 5.36E-146 T 12-10-2018 M892_06405 cb85204f5eba8e864ab971c30dd9cdef 92 SUPERFAMILY SSF52833 5 87 1.34E-28 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M892_06405 cb85204f5eba8e864ab971c30dd9cdef 92 Gene3D G3DSA:3.40.30.10 2 92 6.7E-38 T 12-10-2018 M892_06405 cb85204f5eba8e864ab971c30dd9cdef 92 Pfam PF10262 Rdx family 6 78 3.2E-30 T 12-10-2018 IPR011893 Selenoprotein, Rdx-type M892_06405 cb85204f5eba8e864ab971c30dd9cdef 92 TIGRFAM TIGR02174 CXXU_selWTH: selT/selW/selH selenoprotein domain 6 77 1.3E-23 T 12-10-2018 IPR011893 Selenoprotein, Rdx-type M892_04235 8a39ea10a65b08a56895d78438aa28b9 466 Pfam PF01979 Amidohydrolase family 88 448 1.1E-70 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 M892_04235 8a39ea10a65b08a56895d78438aa28b9 466 Gene3D G3DSA:2.30.40.10 27 444 2.3E-196 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 M892_04235 8a39ea10a65b08a56895d78438aa28b9 466 SUPERFAMILY SSF51338 49 452 1.21E-11 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 M892_04235 8a39ea10a65b08a56895d78438aa28b9 466 TIGRFAM TIGR02967 guan_deamin: guanine deaminase 48 446 3.5E-190 T 12-10-2018 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|Reactome: R-HSA-74259 M892_04235 8a39ea10a65b08a56895d78438aa28b9 466 SUPERFAMILY SSF51556 90 393 2.08E-99 T 12-10-2018 IPR032466 Metal-dependent hydrolase M892_04235 8a39ea10a65b08a56895d78438aa28b9 466 Gene3D G3DSA:3.20.20.140 91 408 2.3E-196 T 12-10-2018 M892_23605 f8e15d5ad6b7f79f9a189a5917a2c902 560 SMART SM00448 2 116 1.8E-33 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_23605 f8e15d5ad6b7f79f9a189a5917a2c902 560 Gene3D G3DSA:3.60.40.10 136 393 2.1E-49 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 M892_23605 f8e15d5ad6b7f79f9a189a5917a2c902 560 Pfam PF13581 Histidine kinase-like ATPase domain 415 547 3.0E-18 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_23605 f8e15d5ad6b7f79f9a189a5917a2c902 560 Gene3D G3DSA:3.40.50.2300 1 135 4.8E-30 T 12-10-2018 M892_23605 f8e15d5ad6b7f79f9a189a5917a2c902 560 SUPERFAMILY SSF55874 436 548 4.98E-9 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_23605 f8e15d5ad6b7f79f9a189a5917a2c902 560 SMART SM00331 164 393 3.0E-15 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 M892_23605 f8e15d5ad6b7f79f9a189a5917a2c902 560 Pfam PF00072 Response regulator receiver domain 4 117 2.5E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_23605 f8e15d5ad6b7f79f9a189a5917a2c902 560 SUPERFAMILY SSF52172 1 161 1.71E-33 T 12-10-2018 IPR011006 CheY-like superfamily M892_23605 f8e15d5ad6b7f79f9a189a5917a2c902 560 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 191 393 4.8E-35 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 M892_23605 f8e15d5ad6b7f79f9a189a5917a2c902 560 Gene3D G3DSA:3.30.565.10 407 559 4.3E-17 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_26890 66f9f0315a82fea6a242005c4683100d 204 Gene3D G3DSA:3.40.30.10 24 198 5.8E-36 T 12-10-2018 M892_26890 66f9f0315a82fea6a242005c4683100d 204 SUPERFAMILY SSF52833 47 196 8.26E-36 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M892_26890 66f9f0315a82fea6a242005c4683100d 204 Pfam PF02630 SCO1/SenC 58 177 2.1E-29 T 12-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_13245 8f1722c172f6d808ca1b7a2456c64b08 141 Pfam PF03652 Holliday junction resolvase 4 136 3.1E-35 T 12-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 M892_13245 8f1722c172f6d808ca1b7a2456c64b08 141 Gene3D G3DSA:3.30.420.140 1 138 1.7E-38 T 12-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 M892_13245 8f1722c172f6d808ca1b7a2456c64b08 141 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 3 139 23.95 T 12-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 M892_13245 8f1722c172f6d808ca1b7a2456c64b08 141 SMART SM00732 3 104 1.3E-34 T 12-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 M892_13245 8f1722c172f6d808ca1b7a2456c64b08 141 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 6 136 4.3E-48 T 12-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 M892_13245 8f1722c172f6d808ca1b7a2456c64b08 141 SUPERFAMILY SSF53098 3 137 7.13E-37 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_25695 ad6f47be53c6910b0e42bfe443e49a53 182 Gene3D G3DSA:1.10.1760.20 1 177 2.7E-19 T 12-10-2018 M892_25695 ad6f47be53c6910b0e42bfe443e49a53 182 Pfam PF07155 ECF-type riboflavin transporter, S component 3 171 7.8E-44 T 12-10-2018 IPR009825 ECF transporter, substrate-specific component-like GO:0016020 M892_25695 ad6f47be53c6910b0e42bfe443e49a53 182 Hamap MF_01572 UPF0397 protein . 1 182 21.132 T 12-10-2018 IPR022914 Protein of unknown function UPF0397 M892_18510 8460177b808dc8f17c154e3865e62d9c 197 SUPERFAMILY SSF56349 10 194 5.0E-36 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 M892_18510 8460177b808dc8f17c154e3865e62d9c 197 Gene3D G3DSA:1.10.443.10 10 183 1.7E-24 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 M892_18510 8460177b808dc8f17c154e3865e62d9c 197 Pfam PF00589 Phage integrase family 30 182 1.4E-18 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 M892_22665 0c44d611c5dd548d80273d2fedf935af 279 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 152 253 2.5E-15 T 12-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 M892_22665 0c44d611c5dd548d80273d2fedf935af 279 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 11 96 2.0E-9 T 12-10-2018 IPR026992 Non-haem dioxygenase N-terminal domain M892_22665 0c44d611c5dd548d80273d2fedf935af 279 SUPERFAMILY SSF51197 7 276 5.77E-61 T 12-10-2018 M892_22665 0c44d611c5dd548d80273d2fedf935af 279 Gene3D G3DSA:2.60.120.330 1 279 9.2E-96 T 12-10-2018 IPR027443 Isopenicillin N synthase-like M892_11960 26a882f9e3b28cd2208eba3dc6cc61a5 323 SUPERFAMILY SSF55681 11 320 2.99E-79 T 12-10-2018 M892_11960 26a882f9e3b28cd2208eba3dc6cc61a5 323 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 14 318 1.4E-125 T 12-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 M892_11960 26a882f9e3b28cd2208eba3dc6cc61a5 323 Gene3D G3DSA:3.30.930.10 1 322 8.4E-107 T 12-10-2018 M892_11960 26a882f9e3b28cd2208eba3dc6cc61a5 323 Hamap MF_00174 Elongation factor P--(R)-beta-lysine ligase [epmA]. 1 323 53.283 T 12-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 M892_11960 26a882f9e3b28cd2208eba3dc6cc61a5 323 Pfam PF00152 tRNA synthetases class II (D, K and N) 11 319 6.0E-44 T 12-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 M892_27260 fd9f2732496cf0f39f5a951472f35c88 231 PIRSF PIRSF028137 1 231 1.2E-107 T 12-10-2018 IPR016870 Uncharacterised conserved protein UCP028137, membrane M892_14215 3087a9426a2761b8d9e73da2f0ddbc05 442 SUPERFAMILY SSF54680 337 437 6.28E-29 T 12-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 M892_14215 3087a9426a2761b8d9e73da2f0ddbc05 442 SUPERFAMILY SSF52418 72 334 1.7E-88 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 M892_14215 3087a9426a2761b8d9e73da2f0ddbc05 442 Hamap MF_01628 Thymidine phosphorylase [deoA]. 2 437 45.326 T 12-10-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 M892_14215 3087a9426a2761b8d9e73da2f0ddbc05 442 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 5 423 2.8E-159 T 12-10-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 M892_14215 3087a9426a2761b8d9e73da2f0ddbc05 442 SMART SM00941 350 424 6.3E-29 T 12-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 M892_14215 3087a9426a2761b8d9e73da2f0ddbc05 442 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 67 3.6E-20 T 12-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 M892_14215 3087a9426a2761b8d9e73da2f0ddbc05 442 Gene3D G3DSA:3.90.1170.30 337 432 1.3E-29 T 12-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 M892_14215 3087a9426a2761b8d9e73da2f0ddbc05 442 Pfam PF00591 Glycosyl transferase family, a/b domain 80 309 1.6E-48 T 12-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 M892_14215 3087a9426a2761b8d9e73da2f0ddbc05 442 Gene3D G3DSA:1.20.970.10 7 195 9.8E-127 T 12-10-2018 M892_14215 3087a9426a2761b8d9e73da2f0ddbc05 442 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 350 423 1.6E-23 T 12-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 M892_14215 3087a9426a2761b8d9e73da2f0ddbc05 442 Gene3D G3DSA:3.40.1030.10 70 322 9.8E-127 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 M892_14215 3087a9426a2761b8d9e73da2f0ddbc05 442 PIRSF PIRSF000478 1 438 1.5E-148 T 12-10-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 M892_14215 3087a9426a2761b8d9e73da2f0ddbc05 442 SUPERFAMILY SSF47648 2 70 6.67E-21 T 12-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 M892_14215 3087a9426a2761b8d9e73da2f0ddbc05 442 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 113 128 - T 12-10-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 M892_14215 3087a9426a2761b8d9e73da2f0ddbc05 442 TIGRFAM TIGR02643 T_phosphoryl: thymidine phosphorylase 3 427 5.2E-212 T 12-10-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 M892_22460 ddb71ff003c17ee5ff83853e948ae4ad 441 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 440 7.7E-153 T 12-10-2018 IPR010263 Type VI secretion protein, VC_A0114 M892_22460 ddb71ff003c17ee5ff83853e948ae4ad 441 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 439 2.6E-137 T 12-10-2018 IPR010263 Type VI secretion protein, VC_A0114 M892_26965 d92279ecb5e1529841da4058c54673b7 540 Gene3D G3DSA:2.60.40.1180 454 539 1.2E-6 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta M892_26965 d92279ecb5e1529841da4058c54673b7 540 SUPERFAMILY SSF51445 55 457 3.06E-71 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily M892_26965 d92279ecb5e1529841da4058c54673b7 540 SMART SM00642 61 447 5.2E-36 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 M892_26965 d92279ecb5e1529841da4058c54673b7 540 Pfam PF00128 Alpha amylase, catalytic domain 205 390 1.0E-14 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 M892_26965 d92279ecb5e1529841da4058c54673b7 540 Pfam PF00128 Alpha amylase, catalytic domain 87 174 1.1E-26 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 M892_26965 d92279ecb5e1529841da4058c54673b7 540 SUPERFAMILY SSF51011 456 535 9.6E-7 T 12-10-2018 M892_26965 d92279ecb5e1529841da4058c54673b7 540 Gene3D G3DSA:3.20.20.80 51 453 1.3E-72 T 12-10-2018 M892_10630 1b6e58a01ef725a448a8655ca500fd17 288 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 288 7.6E-112 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_10630 1b6e58a01ef725a448a8655ca500fd17 288 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 288 36.903 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_10630 1b6e58a01ef725a448a8655ca500fd17 288 Gene3D G3DSA:3.40.1380.10 61 207 1.1E-110 T 12-10-2018 M892_10630 1b6e58a01ef725a448a8655ca500fd17 288 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 274 287 - T 12-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_10630 1b6e58a01ef725a448a8655ca500fd17 288 Gene3D G3DSA:1.10.287.80 6 284 1.1E-110 T 12-10-2018 M892_10630 1b6e58a01ef725a448a8655ca500fd17 288 SUPERFAMILY SSF52943 2 288 1.7E-96 T 12-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_10630 1b6e58a01ef725a448a8655ca500fd17 288 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 8.2E-37 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_10630 1b6e58a01ef725a448a8655ca500fd17 288 PRINTS PR00126 ATP synthase gamma subunit signature 266 287 8.2E-37 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_10630 1b6e58a01ef725a448a8655ca500fd17 288 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 8.2E-37 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_10630 1b6e58a01ef725a448a8655ca500fd17 288 PRINTS PR00126 ATP synthase gamma subunit signature 235 254 8.2E-37 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_10630 1b6e58a01ef725a448a8655ca500fd17 288 Pfam PF00231 ATP synthase 5 287 9.8E-99 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_06090 ba17136000fd2229433489d03b1954f0 286 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 12-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 M892_06090 ba17136000fd2229433489d03b1954f0 286 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 37.901 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 M892_06090 ba17136000fd2229433489d03b1954f0 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 3.6E-89 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 M892_06090 ba17136000fd2229433489d03b1954f0 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 3.6E-89 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 M892_06090 ba17136000fd2229433489d03b1954f0 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 3.6E-89 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 M892_06090 ba17136000fd2229433489d03b1954f0 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 3.6E-89 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 M892_06090 ba17136000fd2229433489d03b1954f0 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 3.6E-89 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 M892_06090 ba17136000fd2229433489d03b1954f0 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 3.6E-89 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 M892_06090 ba17136000fd2229433489d03b1954f0 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 3.6E-89 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 M892_06090 ba17136000fd2229433489d03b1954f0 286 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 12-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 M892_06090 ba17136000fd2229433489d03b1954f0 286 SUPERFAMILY SSF51735 123 280 1.32E-51 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_06090 ba17136000fd2229433489d03b1954f0 286 Gene3D G3DSA:3.40.50.720 6 259 2.2E-107 T 12-10-2018 M892_06090 ba17136000fd2229433489d03b1954f0 286 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 6 121 1.1E-38 T 12-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 M892_06090 ba17136000fd2229433489d03b1954f0 286 Gene3D G3DSA:3.40.50.10860 8 276 2.2E-107 T 12-10-2018 M892_06090 ba17136000fd2229433489d03b1954f0 286 SUPERFAMILY SSF53223 1 122 9.4E-40 T 12-10-2018 M892_06090 ba17136000fd2229433489d03b1954f0 286 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 281 8.4E-69 T 12-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 M892_04545 8943ddf74ba47b1021b2abecfdd8fdcc 260 Pfam PF01311 Bacterial export proteins, family 1 12 247 2.2E-56 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 M892_04545 8943ddf74ba47b1021b2abecfdd8fdcc 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 80 99 1.1E-30 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 M892_04545 8943ddf74ba47b1021b2abecfdd8fdcc 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 19 40 1.1E-30 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 M892_04545 8943ddf74ba47b1021b2abecfdd8fdcc 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 182 204 1.1E-30 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 M892_04545 8943ddf74ba47b1021b2abecfdd8fdcc 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 204 223 1.1E-30 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 M892_04545 8943ddf74ba47b1021b2abecfdd8fdcc 260 TIGRFAM TIGR01401 fliR_like_III: type III secretion apparatus protein SpaR/YscT/HrcT 5 244 1.6E-79 T 12-10-2018 IPR006304 Type III secretion protein SpaR/YscT GO:0016021 M892_28480 3f06f4e4e32f5a203d5f0eca51f4242f 316 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 36 253 4.8E-38 T 12-10-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 M892_08945 9a33ab14dcd98d81f8d92a8c2778fa40 176 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 35.485 T 12-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 M892_08945 9a33ab14dcd98d81f8d92a8c2778fa40 176 SUPERFAMILY SSF50324 3 174 1.83E-63 T 12-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 M892_08945 9a33ab14dcd98d81f8d92a8c2778fa40 176 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 12-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 M892_08945 9a33ab14dcd98d81f8d92a8c2778fa40 176 Pfam PF00719 Inorganic pyrophosphatase 18 173 1.3E-50 T 12-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 M892_08945 9a33ab14dcd98d81f8d92a8c2778fa40 176 Gene3D G3DSA:3.90.80.10 1 175 2.3E-66 T 12-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 M892_24430 3356b9c2cad45bde390f444644e81a6b 200 Gene3D G3DSA:3.40.50.1000 10 192 7.4E-43 T 12-10-2018 IPR023214 HAD superfamily M892_24430 3356b9c2cad45bde390f444644e81a6b 200 SUPERFAMILY SSF56784 8 191 1.9E-44 T 12-10-2018 IPR036412 HAD-like superfamily M892_24430 3356b9c2cad45bde390f444644e81a6b 200 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 128 189 1.9E-12 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M892_24430 3356b9c2cad45bde390f444644e81a6b 200 Gene3D G3DSA:1.10.150.240 24 90 7.4E-43 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 M892_24430 3356b9c2cad45bde390f444644e81a6b 200 Pfam PF13419 Haloacid dehalogenase-like hydrolase 12 189 7.8E-28 T 12-10-2018 M892_24430 3356b9c2cad45bde390f444644e81a6b 200 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 9 189 9.0E-57 T 12-10-2018 IPR010976 Beta-phosphoglucomutase hydrolase M892_13970 2eb26bdff5603735279e0d258d6bcafa 328 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 325 4.5E-39 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M892_13970 2eb26bdff5603735279e0d258d6bcafa 328 SUPERFAMILY SSF161098 93 324 1.07E-15 T 12-10-2018 IPR035906 MetI-like superfamily M892_13970 2eb26bdff5603735279e0d258d6bcafa 328 Gene3D G3DSA:1.10.3720.10 87 327 6.8E-19 T 12-10-2018 IPR035906 MetI-like superfamily M892_00150 2f2d26f2bec7bb7d4f87ac801cc619ac 225 Pfam PF09335 SNARE associated Golgi protein 62 178 5.7E-24 T 12-10-2018 IPR032816 SNARE associated Golgi protein M892_19540 73ef103c3780ef62991feca4152b6505 413 SUPERFAMILY SSF54631 275 395 2.47E-12 T 12-10-2018 M892_19540 73ef103c3780ef62991feca4152b6505 413 SMART SM00382 54 243 2.8E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_19540 73ef103c3780ef62991feca4152b6505 413 Gene3D G3DSA:3.10.580.10 273 395 4.0E-8 T 12-10-2018 M892_19540 73ef103c3780ef62991feca4152b6505 413 ProSitePatterns PS00211 ABC transporters family signature. 166 180 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_19540 73ef103c3780ef62991feca4152b6505 413 Gene3D G3DSA:3.40.50.300 32 270 2.1E-69 T 12-10-2018 M892_19540 73ef103c3780ef62991feca4152b6505 413 SUPERFAMILY SSF52540 39 265 1.89E-74 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_19540 73ef103c3780ef62991feca4152b6505 413 Pfam PF00005 ABC transporter 45 193 4.2E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_19540 73ef103c3780ef62991feca4152b6505 413 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 38 395 3.7E-125 T 12-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 M892_10720 40c028551a3e8d1146f45ee3e4f86eae 200 Gene3D G3DSA:3.40.30.10 17 200 3.3E-55 T 12-10-2018 M892_10720 40c028551a3e8d1146f45ee3e4f86eae 200 Pfam PF01323 DSBA-like thioredoxin domain 40 183 1.4E-28 T 12-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 M892_10720 40c028551a3e8d1146f45ee3e4f86eae 200 PIRSF PIRSF001488 1 200 8.8E-70 T 12-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL M892_10720 40c028551a3e8d1146f45ee3e4f86eae 200 SUPERFAMILY SSF52833 20 197 3.18E-45 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M892_10720 40c028551a3e8d1146f45ee3e4f86eae 200 ProSitePatterns PS00194 Thioredoxin family active site. 41 59 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 M892_10980 60955263f7ccbbd60e17a5caa9901154 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 409 427 3.8E-64 T 12-10-2018 M892_10980 60955263f7ccbbd60e17a5caa9901154 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 491 508 3.8E-64 T 12-10-2018 M892_10980 60955263f7ccbbd60e17a5caa9901154 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 300 319 3.8E-64 T 12-10-2018 M892_10980 60955263f7ccbbd60e17a5caa9901154 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 150 168 3.8E-64 T 12-10-2018 M892_10980 60955263f7ccbbd60e17a5caa9901154 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 431 449 3.8E-64 T 12-10-2018 M892_10980 60955263f7ccbbd60e17a5caa9901154 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 168 187 3.8E-64 T 12-10-2018 M892_10980 60955263f7ccbbd60e17a5caa9901154 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 75 100 3.8E-64 T 12-10-2018 M892_10980 60955263f7ccbbd60e17a5caa9901154 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 270 286 3.8E-64 T 12-10-2018 M892_10980 60955263f7ccbbd60e17a5caa9901154 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 467 482 3.8E-64 T 12-10-2018 M892_10980 60955263f7ccbbd60e17a5caa9901154 588 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 54 580 5.9E-138 T 12-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 M892_10980 60955263f7ccbbd60e17a5caa9901154 588 SUPERFAMILY SSF56235 45 587 1.22E-174 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal M892_10980 60955263f7ccbbd60e17a5caa9901154 588 Pfam PF01019 Gamma-glutamyltranspeptidase 68 583 5.6E-162 T 12-10-2018 M892_10980 60955263f7ccbbd60e17a5caa9901154 588 Gene3D G3DSA:1.10.246.130 286 409 5.7E-41 T 12-10-2018 M892_10980 60955263f7ccbbd60e17a5caa9901154 588 Gene3D G3DSA:3.60.20.40 410 588 1.2E-58 T 12-10-2018 M892_24595 3ff4bae256f43daf3557b54c169c4eca 220 Gene3D G3DSA:2.40.10.220 113 219 4.4E-8 T 12-10-2018 M892_24595 3ff4bae256f43daf3557b54c169c4eca 220 Pfam PF12945 Flagellar protein YcgR 15 105 1.6E-8 T 12-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal M892_24595 3ff4bae256f43daf3557b54c169c4eca 220 SUPERFAMILY SSF141371 116 218 5.76E-22 T 12-10-2018 M892_24595 3ff4bae256f43daf3557b54c169c4eca 220 Gene3D G3DSA:2.30.110.10 3 112 3.7E-11 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 M892_24595 3ff4bae256f43daf3557b54c169c4eca 220 SUPERFAMILY SSF141371 2 115 8.63E-29 T 12-10-2018 M892_24595 3ff4bae256f43daf3557b54c169c4eca 220 Pfam PF07238 PilZ domain 113 213 6.7E-13 T 12-10-2018 IPR009875 PilZ domain GO:0035438 M892_11020 7a84e967fc9f12c7fd430a5d79025a1a 497 Gene3D G3DSA:3.30.420.40 11 299 1.3E-81 T 12-10-2018 M892_11020 7a84e967fc9f12c7fd430a5d79025a1a 497 Hamap MF_01550 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [gppA]. 4 495 53.035 T 12-10-2018 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase GO:0008894|GO:0015974 KEGG: 00230+3.6.1.40 M892_11020 7a84e967fc9f12c7fd430a5d79025a1a 497 Pfam PF02541 Ppx/GppA phosphatase family 23 303 7.5E-87 T 12-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 M892_11020 7a84e967fc9f12c7fd430a5d79025a1a 497 SUPERFAMILY SSF109604 309 495 6.28E-40 T 12-10-2018 M892_11020 7a84e967fc9f12c7fd430a5d79025a1a 497 Gene3D G3DSA:1.10.3210.10 306 496 9.6E-45 T 12-10-2018 M892_11020 7a84e967fc9f12c7fd430a5d79025a1a 497 Gene3D G3DSA:3.30.420.150 114 291 1.3E-81 T 12-10-2018 M892_11020 7a84e967fc9f12c7fd430a5d79025a1a 497 PIRSF PIRSF001267 1 496 7.1E-178 T 12-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 M892_11020 7a84e967fc9f12c7fd430a5d79025a1a 497 SUPERFAMILY SSF53067 134 305 6.24E-42 T 12-10-2018 M892_11020 7a84e967fc9f12c7fd430a5d79025a1a 497 SUPERFAMILY SSF53067 9 129 1.67E-35 T 12-10-2018 M892_16775 7e4ad8c5edf22225fdbcdb13920692f6 208 Pfam PF03543 Yersinia/Haemophilus virulence surface antigen 18 205 1.1E-38 T 12-10-2018 IPR006473 Peptidase C58, YopT-type domain GO:0004197|GO:0009405 M892_16775 7e4ad8c5edf22225fdbcdb13920692f6 208 SUPERFAMILY SSF54001 18 189 8.63E-24 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily M892_16775 7e4ad8c5edf22225fdbcdb13920692f6 208 Gene3D G3DSA:3.90.70.20 9 178 7.1E-12 T 12-10-2018 M892_16775 7e4ad8c5edf22225fdbcdb13920692f6 208 TIGRFAM TIGR01586 yopT_cys_prot: cysteine protease domain, YopT-type 15 202 6.5E-30 T 12-10-2018 IPR006473 Peptidase C58, YopT-type domain GO:0004197|GO:0009405 M892_16775 7e4ad8c5edf22225fdbcdb13920692f6 208 PRINTS PR01376 Yersinia/Haemophilus virulence surface antigen signature 16 32 8.3E-18 T 12-10-2018 IPR003951 Peptidase C58, Yersinia/Haemophilus virulence surface antigen GO:0004197 M892_16775 7e4ad8c5edf22225fdbcdb13920692f6 208 PRINTS PR01376 Yersinia/Haemophilus virulence surface antigen signature 154 174 8.3E-18 T 12-10-2018 IPR003951 Peptidase C58, Yersinia/Haemophilus virulence surface antigen GO:0004197 M892_16775 7e4ad8c5edf22225fdbcdb13920692f6 208 PRINTS PR01376 Yersinia/Haemophilus virulence surface antigen signature 46 72 8.3E-18 T 12-10-2018 IPR003951 Peptidase C58, Yersinia/Haemophilus virulence surface antigen GO:0004197 M892_27860 7df9610b91b057023165a693f02903e1 175 SUPERFAMILY SSF75217 5 146 3.09E-28 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases M892_27860 7df9610b91b057023165a693f02903e1 175 Gene3D G3DSA:3.40.1280.10 7 150 2.3E-19 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal M892_27860 7df9610b91b057023165a693f02903e1 175 Pfam PF00588 SpoU rRNA Methylase family 7 140 2.7E-19 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 M892_08035 598e084024aec496c9cf4f0a0a206629 382 Pfam PF02690 Na+/Pi-cotransporter 218 326 7.8E-19 T 12-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 M892_08035 598e084024aec496c9cf4f0a0a206629 382 Pfam PF02690 Na+/Pi-cotransporter 30 150 9.3E-23 T 12-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 M892_02185 bf4b086927ff4e7ce19ebac06ff674aa 106 Gene3D G3DSA:3.30.750.24 1 105 7.4E-18 T 12-10-2018 IPR036513 STAS domain superfamily M892_02185 bf4b086927ff4e7ce19ebac06ff674aa 106 SUPERFAMILY SSF52091 6 101 1.31E-20 T 12-10-2018 IPR036513 STAS domain superfamily M892_02185 bf4b086927ff4e7ce19ebac06ff674aa 106 Pfam PF01740 STAS domain 8 97 2.5E-9 T 12-10-2018 IPR002645 STAS domain M892_22260 e7da7c73ee492bfd6212de04b78530b7 87 Gene3D G3DSA:1.10.10.10 12 78 3.2E-5 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_22260 e7da7c73ee492bfd6212de04b78530b7 87 Pfam PF13384 Homeodomain-like domain 28 67 7.4E-8 T 12-10-2018 M892_22260 e7da7c73ee492bfd6212de04b78530b7 87 SUPERFAMILY SSF46689 15 83 1.08E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_10620 9622568c4d4cee2a1c182d6d6e3a530b 177 SUPERFAMILY SSF47928 3 105 9.15E-28 T 12-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_10620 9622568c4d4cee2a1c182d6d6e3a530b 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 2.2E-64 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_10620 9622568c4d4cee2a1c182d6d6e3a530b 177 Gene3D G3DSA:1.10.520.20 2 106 4.6E-38 T 12-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_10620 9622568c4d4cee2a1c182d6d6e3a530b 177 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 12-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_10620 9622568c4d4cee2a1c182d6d6e3a530b 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 5.7E-28 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_10620 9622568c4d4cee2a1c182d6d6e3a530b 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 5.7E-28 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_10620 9622568c4d4cee2a1c182d6d6e3a530b 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 5.7E-28 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_10620 9622568c4d4cee2a1c182d6d6e3a530b 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 5.7E-28 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_10620 9622568c4d4cee2a1c182d6d6e3a530b 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 5.7E-28 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_10620 9622568c4d4cee2a1c182d6d6e3a530b 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 18.648 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_10620 9622568c4d4cee2a1c182d6d6e3a530b 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 175 1.2E-51 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M892_04830 d74a383a8953403c75e44cd6c71f070a 320 SUPERFAMILY SSF46689 9 104 8.96E-18 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_04830 d74a383a8953403c75e44cd6c71f070a 320 Pfam PF13358 DDE superfamily endonuclease 142 285 1.4E-33 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_04830 d74a383a8953403c75e44cd6c71f070a 320 Gene3D G3DSA:3.30.420.470 110 315 8.8E-11 T 12-10-2018 M892_04830 d74a383a8953403c75e44cd6c71f070a 320 SUPERFAMILY SSF53098 194 291 1.61E-6 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_04830 d74a383a8953403c75e44cd6c71f070a 320 Pfam PF13592 Winged helix-turn helix 72 128 3.5E-19 T 12-10-2018 IPR025959 Winged helix-turn helix domain M892_20055 cfa3b710b4e040724aa57580cb6e82d3 135 Pfam PF09413 Putative prokaryotic signal transducing protein 1 65 8.9E-13 T 12-10-2018 IPR018551 Domain of unknown function DUF2007 M892_20055 cfa3b710b4e040724aa57580cb6e82d3 135 SUPERFAMILY SSF54913 1 66 5.11E-10 T 12-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta M892_20725 6888d10fe43092113a920e97c07a82ed 78 Pfam PF11137 Protein of unknown function (DUF2909) 7 71 2.2E-21 T 12-10-2018 IPR021313 Protein of unknown function DUF2909 M892_15835 baec993de2d9399bf0eded3b5e817cbd 353 SUPERFAMILY SSF53098 8 349 7.43E-51 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_15835 baec993de2d9399bf0eded3b5e817cbd 353 Pfam PF01609 Transposase DDE domain 130 292 1.2E-15 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_20695 29f54f3e0e59b463f20e4ad39fe03d4d 46 Gene3D G3DSA:3.40.630.30 1 45 1.8E-7 T 12-10-2018 M892_20695 29f54f3e0e59b463f20e4ad39fe03d4d 46 SUPERFAMILY SSF55729 2 44 1.34E-7 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_26375 a9e0155b5523dd5cc76fe593c9fd76e7 289 SUPERFAMILY SSF64518 1 289 2.75E-76 T 12-10-2018 M892_26375 a9e0155b5523dd5cc76fe593c9fd76e7 289 PRINTS PR00207 Flagellin signature 76 95 2.7E-20 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 M892_26375 a9e0155b5523dd5cc76fe593c9fd76e7 289 PRINTS PR00207 Flagellin signature 111 134 2.7E-20 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 M892_26375 a9e0155b5523dd5cc76fe593c9fd76e7 289 PRINTS PR00207 Flagellin signature 37 54 2.7E-20 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 M892_26375 a9e0155b5523dd5cc76fe593c9fd76e7 289 Gene3D G3DSA:1.20.58.1830 7 33 3.8E-61 T 12-10-2018 M892_26375 a9e0155b5523dd5cc76fe593c9fd76e7 289 Pfam PF00669 Bacterial flagellin N-terminal helical region 6 141 3.4E-42 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 M892_26375 a9e0155b5523dd5cc76fe593c9fd76e7 289 Gene3D G3DSA:2.170.280.10 180 193 3.8E-61 T 12-10-2018 M892_26375 a9e0155b5523dd5cc76fe593c9fd76e7 289 Pfam PF00700 Bacterial flagellin C-terminal helical region 210 288 2.2E-27 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 M892_26375 a9e0155b5523dd5cc76fe593c9fd76e7 289 Gene3D G3DSA:1.20.1330.10 45 179 3.8E-61 T 12-10-2018 M892_26375 a9e0155b5523dd5cc76fe593c9fd76e7 289 Gene3D G3DSA:1.10.8.410 237 289 2.2E-19 T 12-10-2018 M892_25365 1871cd56bd238d4f09b43a36804b789d 280 SUPERFAMILY SSF46689 181 227 3.76E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_25365 1871cd56bd238d4f09b43a36804b789d 280 SMART SM00342 194 277 1.5E-30 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M892_25365 1871cd56bd238d4f09b43a36804b789d 280 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 231 273 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 M892_25365 1871cd56bd238d4f09b43a36804b789d 280 Gene3D G3DSA:1.10.10.60 177 227 4.9E-13 T 12-10-2018 M892_25365 1871cd56bd238d4f09b43a36804b789d 280 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 261 277 3.1E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 M892_25365 1871cd56bd238d4f09b43a36804b789d 280 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 246 261 3.1E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 M892_25365 1871cd56bd238d4f09b43a36804b789d 280 Pfam PF12833 Helix-turn-helix domain 200 278 2.9E-19 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M892_25365 1871cd56bd238d4f09b43a36804b789d 280 Gene3D G3DSA:1.10.10.60 228 280 7.6E-17 T 12-10-2018 M892_25365 1871cd56bd238d4f09b43a36804b789d 280 SUPERFAMILY SSF46689 230 279 4.48E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_00505 2bf8ca9ff6adcff8fc34e39d3722c111 145 SUPERFAMILY SSF53098 13 127 1.97E-5 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_01315 0eff3816d067aef39243f6a3d65ba9ac 506 SUPERFAMILY SSF53720 13 497 2.09E-163 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 M892_01315 0eff3816d067aef39243f6a3d65ba9ac 506 Pfam PF00171 Aldehyde dehydrogenase family 27 493 2.4E-167 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 M892_01315 0eff3816d067aef39243f6a3d65ba9ac 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 M892_01315 0eff3816d067aef39243f6a3d65ba9ac 506 Gene3D G3DSA:3.40.309.10 270 501 6.1E-75 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 M892_01315 0eff3816d067aef39243f6a3d65ba9ac 506 Gene3D G3DSA:3.40.605.10 11 269 1.2E-89 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 M892_01315 0eff3816d067aef39243f6a3d65ba9ac 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 M892_03795 0d91d07f737562a1fe6af0ade4fa1e09 1036 PRINTS PR00702 Acriflavin resistance protein family signature 27 51 4.0E-25 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_03795 0d91d07f737562a1fe6af0ade4fa1e09 1036 PRINTS PR00702 Acriflavin resistance protein family signature 55 73 4.0E-25 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_03795 0d91d07f737562a1fe6af0ade4fa1e09 1036 PRINTS PR00702 Acriflavin resistance protein family signature 349 372 4.0E-25 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_03795 0d91d07f737562a1fe6af0ade4fa1e09 1036 PRINTS PR00702 Acriflavin resistance protein family signature 456 479 4.0E-25 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_03795 0d91d07f737562a1fe6af0ade4fa1e09 1036 PRINTS PR00702 Acriflavin resistance protein family signature 481 504 4.0E-25 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_03795 0d91d07f737562a1fe6af0ade4fa1e09 1036 PRINTS PR00702 Acriflavin resistance protein family signature 403 427 4.0E-25 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_03795 0d91d07f737562a1fe6af0ade4fa1e09 1036 SUPERFAMILY SSF82693 153 342 7.59E-19 T 12-10-2018 M892_03795 0d91d07f737562a1fe6af0ade4fa1e09 1036 SUPERFAMILY SSF82693 57 152 9.77E-23 T 12-10-2018 M892_03795 0d91d07f737562a1fe6af0ade4fa1e09 1036 Gene3D G3DSA:1.20.1640.10 27 522 1.8E-259 T 12-10-2018 M892_03795 0d91d07f737562a1fe6af0ade4fa1e09 1036 Gene3D G3DSA:3.30.2090.10 196 288 1.8E-259 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M892_03795 0d91d07f737562a1fe6af0ade4fa1e09 1036 SUPERFAMILY SSF82714 731 805 2.09E-9 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M892_03795 0d91d07f737562a1fe6af0ade4fa1e09 1036 Pfam PF00873 AcrB/AcrD/AcrF family 21 1030 1.9E-170 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M892_03795 0d91d07f737562a1fe6af0ade4fa1e09 1036 SUPERFAMILY SSF82866 309 508 3.66E-33 T 12-10-2018 M892_03795 0d91d07f737562a1fe6af0ade4fa1e09 1036 SUPERFAMILY SSF82714 201 284 2.49E-12 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M892_03795 0d91d07f737562a1fe6af0ade4fa1e09 1036 SUPERFAMILY SSF82866 810 1033 1.44E-47 T 12-10-2018 M892_03795 0d91d07f737562a1fe6af0ade4fa1e09 1036 Gene3D G3DSA:3.30.70.1430 57 822 1.8E-259 T 12-10-2018 M892_03795 0d91d07f737562a1fe6af0ade4fa1e09 1036 Gene3D G3DSA:3.30.2090.10 724 814 1.8E-259 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M892_03795 0d91d07f737562a1fe6af0ade4fa1e09 1036 Gene3D G3DSA:3.30.70.1320 153 345 1.8E-259 T 12-10-2018 M892_03795 0d91d07f737562a1fe6af0ade4fa1e09 1036 Gene3D G3DSA:3.30.70.1440 673 874 1.8E-259 T 12-10-2018 M892_03795 0d91d07f737562a1fe6af0ade4fa1e09 1036 Gene3D G3DSA:3.30.70.1430 574 672 1.8E-259 T 12-10-2018 M892_03795 0d91d07f737562a1fe6af0ade4fa1e09 1036 Gene3D G3DSA:1.20.1640.10 523 1026 1.8E-259 T 12-10-2018 M892_02820 7b851957e56a41b92728e3d43acbb935 521 Pfam PF03050 Transposase IS66 family 191 474 2.1E-101 T 12-10-2018 IPR004291 Transposase, IS66 M892_02820 7b851957e56a41b92728e3d43acbb935 521 Pfam PF13007 Transposase C of IS166 homeodomain 49 119 2.3E-14 T 12-10-2018 IPR024463 Transposase TnpC, homeodomain M892_02820 7b851957e56a41b92728e3d43acbb935 521 Pfam PF13817 IS66 C-terminal element 481 517 7.7E-8 T 12-10-2018 IPR039552 Transposase IS66, C-terminal M892_02820 7b851957e56a41b92728e3d43acbb935 521 Pfam PF13005 zinc-finger binding domain of transposase IS66 127 171 1.6E-16 T 12-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 M892_27240 5f4cf80ccfce79103ce80bb59f64031c 215 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 14 191 9.7E-49 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal M892_27240 5f4cf80ccfce79103ce80bb59f64031c 215 SMART SM01007 13 192 3.0E-61 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal M892_27240 5f4cf80ccfce79103ce80bb59f64031c 215 Gene3D G3DSA:3.40.225.10 6 213 1.5E-61 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily M892_27240 5f4cf80ccfce79103ce80bb59f64031c 215 SUPERFAMILY SSF53639 6 210 2.75E-63 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily M892_03855 9f7fc9cd9e968efe3dadc95cda2335a1 379 Pfam PF01609 Transposase DDE domain 222 358 3.4E-5 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_03855 9f7fc9cd9e968efe3dadc95cda2335a1 379 Gene3D G3DSA:1.10.246.40 1 65 7.3E-25 T 12-10-2018 IPR038215 Transposase, Tn5-like, N-terminal domain superfamily M892_03855 9f7fc9cd9e968efe3dadc95cda2335a1 379 Gene3D G3DSA:3.90.350.10 66 347 4.9E-80 T 12-10-2018 IPR014736 Transposase, Tn5-like, core M892_03855 9f7fc9cd9e968efe3dadc95cda2335a1 379 SUPERFAMILY SSF53098 1 369 4.7E-104 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_03855 9f7fc9cd9e968efe3dadc95cda2335a1 379 Pfam PF14706 Transposase DNA-binding 9 65 3.7E-17 T 12-10-2018 IPR014735 Transposase, Tn5-like, N-terminal M892_25050 2d7e91138a4f65bfa9a06b2e9b6318ce 92 SUPERFAMILY SSF54534 5 89 1.5E-25 T 12-10-2018 M892_25050 2d7e91138a4f65bfa9a06b2e9b6318ce 92 Gene3D G3DSA:3.10.50.40 2 92 9.9E-34 T 12-10-2018 M892_25050 2d7e91138a4f65bfa9a06b2e9b6318ce 92 Pfam PF13616 PPIC-type PPIASE domain 13 89 1.7E-22 T 12-10-2018 M892_20425 3cea475a1744dd81cf25f122f78f1a9b 111 Gene3D G3DSA:3.20.20.70 1 103 1.7E-32 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M892_20425 3cea475a1744dd81cf25f122f78f1a9b 111 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 37 46 - T 12-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 M892_20425 3cea475a1744dd81cf25f122f78f1a9b 111 SUPERFAMILY SSF51569 3 96 1.68E-29 T 12-10-2018 M892_20425 3cea475a1744dd81cf25f122f78f1a9b 111 Pfam PF01081 KDPG and KHG aldolase 7 98 1.6E-32 T 12-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 M892_04730 51731a22728987dc9d1613c61e22ca7a 337 Pfam PF12835 Integrase 138 272 1.1E-11 T 12-10-2018 IPR024456 Integrase catalytic domain, putative M892_04730 51731a22728987dc9d1613c61e22ca7a 337 SUPERFAMILY SSF56349 45 277 1.06E-11 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 M892_04730 51731a22728987dc9d1613c61e22ca7a 337 Gene3D G3DSA:1.10.150.130 35 134 2.5E-5 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal M892_01410 22d9df679980f2aada7cd010a8d2842d 408 Pfam PF03050 Transposase IS66 family 78 361 2.9E-101 T 12-10-2018 IPR004291 Transposase, IS66 M892_01410 22d9df679980f2aada7cd010a8d2842d 408 Pfam PF13817 IS66 C-terminal element 368 404 5.6E-8 T 12-10-2018 IPR039552 Transposase IS66, C-terminal M892_01410 22d9df679980f2aada7cd010a8d2842d 408 Pfam PF13005 zinc-finger binding domain of transposase IS66 14 58 1.2E-16 T 12-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 M892_09795 f6d764f20d2f2d19f3d3b740c3cf2db0 336 SUPERFAMILY SSF158544 101 213 4.97E-33 T 12-10-2018 IPR038072 GspK, central domain superfamily M892_09795 f6d764f20d2f2d19f3d3b740c3cf2db0 336 Gene3D G3DSA:1.10.40.60 99 215 9.0E-92 T 12-10-2018 IPR038072 GspK, central domain superfamily M892_09795 f6d764f20d2f2d19f3d3b740c3cf2db0 336 Gene3D G3DSA:3.30.1300.30 42 309 9.0E-92 T 12-10-2018 M892_09795 f6d764f20d2f2d19f3d3b740c3cf2db0 336 Gene3D G3DSA:1.10.40.60 216 285 9.0E-92 T 12-10-2018 IPR038072 GspK, central domain superfamily M892_09795 f6d764f20d2f2d19f3d3b740c3cf2db0 336 Pfam PF03934 Type II secretion system (T2SS), protein K 30 317 8.6E-88 T 12-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 M892_09795 f6d764f20d2f2d19f3d3b740c3cf2db0 336 SUPERFAMILY SSF158544 215 282 2.07E-19 T 12-10-2018 IPR038072 GspK, central domain superfamily M892_09795 f6d764f20d2f2d19f3d3b740c3cf2db0 336 PIRSF PIRSF002786 1 328 2.1E-67 T 12-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 M892_09795 f6d764f20d2f2d19f3d3b740c3cf2db0 336 SUPERFAMILY SSF54523 36 325 1.24E-35 T 12-10-2018 M892_14085 cb7d95ed8cfd53e8ff7482f8160d61fd 112 Pfam PF03840 Preprotein translocase SecG subunit 4 71 1.1E-21 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 M892_14085 cb7d95ed8cfd53e8ff7482f8160d61fd 112 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 73 4.6E-25 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 M892_14085 cb7d95ed8cfd53e8ff7482f8160d61fd 112 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 2.4E-44 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 M892_14085 cb7d95ed8cfd53e8ff7482f8160d61fd 112 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 2.4E-44 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 M892_14085 cb7d95ed8cfd53e8ff7482f8160d61fd 112 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 2.4E-44 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 M892_14085 cb7d95ed8cfd53e8ff7482f8160d61fd 112 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 2.4E-44 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 M892_23435 fcdee7ca94526189b40cb36ff34f4c35 91 Pfam PF03206 Nitrogen fixation protein NifW 8 72 1.5E-4 T 12-10-2018 IPR004893 Nitrogen fixation protein NifW GO:0009399 M892_17735 82d8ce98da4ad91ec3da7a9145675b71 89 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 2 70 1.2E-6 T 12-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 M892_17735 82d8ce98da4ad91ec3da7a9145675b71 89 Gene3D G3DSA:2.170.150.70 1 89 1.1E-24 T 12-10-2018 M892_17735 82d8ce98da4ad91ec3da7a9145675b71 89 SUPERFAMILY SSF51316 1 88 2.2E-19 T 12-10-2018 IPR011057 Mss4-like superfamily M892_25460 9f2e1782c568c8e69ae9ef90ae337d50 3765 Pfam PF01345 Domain of unknown function DUF11 2395 2464 2.2E-6 T 12-10-2018 IPR001434 Domain of unknown function DUF11 M892_25460 9f2e1782c568c8e69ae9ef90ae337d50 3765 Pfam PF01345 Domain of unknown function DUF11 3355 3437 1.6E-6 T 12-10-2018 IPR001434 Domain of unknown function DUF11 M892_25460 9f2e1782c568c8e69ae9ef90ae337d50 3765 Gene3D G3DSA:2.60.40.740 3338 3483 4.1E-5 T 12-10-2018 M892_25460 9f2e1782c568c8e69ae9ef90ae337d50 3765 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 3357 3407 4.6E-8 T 12-10-2018 IPR001434 Domain of unknown function DUF11 M892_25460 9f2e1782c568c8e69ae9ef90ae337d50 3765 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 2670 2708 3.3E-4 T 12-10-2018 IPR001434 Domain of unknown function DUF11 M892_25460 9f2e1782c568c8e69ae9ef90ae337d50 3765 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 610 646 2.6E-6 T 12-10-2018 IPR001434 Domain of unknown function DUF11 M892_25460 9f2e1782c568c8e69ae9ef90ae337d50 3765 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 2942 2979 1.3E-5 T 12-10-2018 IPR001434 Domain of unknown function DUF11 M892_25460 9f2e1782c568c8e69ae9ef90ae337d50 3765 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 2397 2433 3.9E-6 T 12-10-2018 IPR001434 Domain of unknown function DUF11 M892_07610 c483b794fe55d19ecd4c6bd66f93fb12 112 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 13 91 4.1E-15 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 M892_07610 c483b794fe55d19ecd4c6bd66f93fb12 112 PRINTS PR00355 Adrenodoxin signature 42 52 3.2E-10 T 12-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 M892_07610 c483b794fe55d19ecd4c6bd66f93fb12 112 PRINTS PR00355 Adrenodoxin signature 83 91 3.2E-10 T 12-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 M892_07610 c483b794fe55d19ecd4c6bd66f93fb12 112 PRINTS PR00355 Adrenodoxin signature 60 74 3.2E-10 T 12-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 M892_07610 c483b794fe55d19ecd4c6bd66f93fb12 112 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 110 4.8E-61 T 12-10-2018 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 M892_07610 c483b794fe55d19ecd4c6bd66f93fb12 112 Gene3D G3DSA:3.10.20.30 1 112 1.3E-36 T 12-10-2018 IPR012675 Beta-grasp domain superfamily M892_07610 c483b794fe55d19ecd4c6bd66f93fb12 112 SUPERFAMILY SSF54292 5 107 2.49E-32 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 M892_07610 c483b794fe55d19ecd4c6bd66f93fb12 112 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 12-10-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 M892_26270 786463f8b1912f812178384aeff576e2 146 Gene3D G3DSA:3.30.530.20 1 146 5.3E-17 T 12-10-2018 IPR023393 START-like domain superfamily M892_26270 786463f8b1912f812178384aeff576e2 146 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 12 79 1.4E-5 T 12-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like M892_26270 786463f8b1912f812178384aeff576e2 146 SUPERFAMILY SSF55961 2 145 2.36E-19 T 12-10-2018 M892_11295 141385bb7cd70573f02bface72787273 322 PIRSF PIRSF003097 24 318 8.7E-62 T 12-10-2018 IPR004513 Cell division protein FtsX GO:0016021 M892_12565 0ddc148841e3425fd254a306ebeccb13 550 Pfam PF00342 Phosphoglucose isomerase 53 542 1.6E-253 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_12565 0ddc148841e3425fd254a306ebeccb13 550 Gene3D G3DSA:3.40.50.10490 99 292 1.2E-240 T 12-10-2018 M892_12565 0ddc148841e3425fd254a306ebeccb13 550 Gene3D G3DSA:1.10.1390.10 508 550 3.6E-20 T 12-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_12565 0ddc148841e3425fd254a306ebeccb13 550 Gene3D G3DSA:3.40.50.10490 13 507 1.2E-240 T 12-10-2018 M892_12565 0ddc148841e3425fd254a306ebeccb13 550 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 266 279 - T 12-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_12565 0ddc148841e3425fd254a306ebeccb13 550 SUPERFAMILY SSF53697 6 548 1.25E-226 T 12-10-2018 M892_12565 0ddc148841e3425fd254a306ebeccb13 550 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 498 515 - T 12-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_12565 0ddc148841e3425fd254a306ebeccb13 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 151 170 2.2E-56 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_12565 0ddc148841e3425fd254a306ebeccb13 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 262 280 2.2E-56 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_12565 0ddc148841e3425fd254a306ebeccb13 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 498 511 2.2E-56 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_12565 0ddc148841e3425fd254a306ebeccb13 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 466 484 2.2E-56 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_12565 0ddc148841e3425fd254a306ebeccb13 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 484 498 2.2E-56 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_12565 0ddc148841e3425fd254a306ebeccb13 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 339 360 2.2E-56 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_12565 0ddc148841e3425fd254a306ebeccb13 550 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 47 525 42.972 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_01550 af13d95b0ace94de3ee4674015dbb540 397 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 169 376 1.4E-30 T 12-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 M892_01550 af13d95b0ace94de3ee4674015dbb540 397 Gene3D G3DSA:3.30.750.80 73 180 4.4E-35 T 12-10-2018 M892_01550 af13d95b0ace94de3ee4674015dbb540 397 SUPERFAMILY SSF88697 4 73 3.13E-17 T 12-10-2018 IPR015947 PUA-like superfamily M892_01550 af13d95b0ace94de3ee4674015dbb540 397 Gene3D G3DSA:3.40.50.150 181 396 2.4E-69 T 12-10-2018 M892_01550 af13d95b0ace94de3ee4674015dbb540 397 Gene3D G3DSA:2.30.130.10 1 72 6.3E-29 T 12-10-2018 IPR036974 PUA domain superfamily GO:0003723 M892_01550 af13d95b0ace94de3ee4674015dbb540 397 Hamap MF_01857 Ribosomal RNA large subunit methyltransferase I [rlmI]. 1 397 68.441 T 12-10-2018 IPR023542 rRNA large subunit methyltransferase I GO:0008649 M892_01550 af13d95b0ace94de3ee4674015dbb540 397 SUPERFAMILY SSF53335 78 393 6.88E-70 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M892_01550 af13d95b0ace94de3ee4674015dbb540 397 SMART SM00359 3 86 8.2E-13 T 12-10-2018 IPR002478 PUA domain GO:0003723 M892_20420 ad55a93743b7e6b57a48a2824bf7e783 314 SUPERFAMILY SSF53613 6 305 3.9E-64 T 12-10-2018 IPR029056 Ribokinase-like M892_20420 ad55a93743b7e6b57a48a2824bf7e783 314 Pfam PF00294 pfkB family carbohydrate kinase 7 307 1.1E-48 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB M892_20420 ad55a93743b7e6b57a48a2824bf7e783 314 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 260 273 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 M892_20420 ad55a93743b7e6b57a48a2824bf7e783 314 Gene3D G3DSA:3.40.1190.20 4 312 1.1E-66 T 12-10-2018 IPR029056 Ribokinase-like M892_06785 48a599b8238a011be18f370da046b64f 196 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 5 184 35.13 T 12-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 M892_06785 48a599b8238a011be18f370da046b64f 196 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 5 191 2.2E-67 T 12-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 M892_06785 48a599b8238a011be18f370da046b64f 196 Pfam PF01195 Peptidyl-tRNA hydrolase 7 190 4.6E-52 T 12-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 M892_06785 48a599b8238a011be18f370da046b64f 196 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 112 122 - T 12-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 M892_06785 48a599b8238a011be18f370da046b64f 196 Gene3D G3DSA:3.40.50.1470 1 196 1.7E-75 T 12-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 M892_06785 48a599b8238a011be18f370da046b64f 196 SUPERFAMILY SSF53178 5 194 3.66E-68 T 12-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 M892_06785 48a599b8238a011be18f370da046b64f 196 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 18 31 - T 12-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 M892_25495 26565f958d65d15759a7471d919c0ba9 194 Gene3D G3DSA:2.150.10.10 66 189 2.7E-19 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal M892_25495 26565f958d65d15759a7471d919c0ba9 194 SUPERFAMILY SSF51120 4 174 2.41E-25 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal M892_25495 26565f958d65d15759a7471d919c0ba9 194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 46 63 1.0E-4 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 M892_25495 26565f958d65d15759a7471d919c0ba9 194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 83 99 7.0 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 M892_25495 26565f958d65d15759a7471d919c0ba9 194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 22 35 0.82 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 M892_25495 26565f958d65d15759a7471d919c0ba9 194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 101 116 0.018 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 M892_25495 26565f958d65d15759a7471d919c0ba9 194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 65 81 1.5 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 M892_25495 26565f958d65d15759a7471d919c0ba9 194 PRINTS PR00313 NodO calcium binding signature 74 82 1.1E-12 T 12-10-2018 M892_25495 26565f958d65d15759a7471d919c0ba9 194 PRINTS PR00313 NodO calcium binding signature 44 55 1.1E-12 T 12-10-2018 M892_25495 26565f958d65d15759a7471d919c0ba9 194 PRINTS PR00313 NodO calcium binding signature 56 64 1.1E-12 T 12-10-2018 M892_25495 26565f958d65d15759a7471d919c0ba9 194 PRINTS PR00313 NodO calcium binding signature 110 119 1.1E-12 T 12-10-2018 M892_25495 26565f958d65d15759a7471d919c0ba9 194 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 61 79 - T 12-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site M892_25495 26565f958d65d15759a7471d919c0ba9 194 Gene3D G3DSA:2.150.10.10 1 65 1.3E-9 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal M892_27825 100b705d1bdff42d7524e9ef5b0a54d7 164 PIRSF PIRSF001467 1 164 7.4E-26 T 12-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 M892_27825 100b705d1bdff42d7524e9ef5b0a54d7 164 SUPERFAMILY SSF50891 2 162 3.8E-57 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily M892_27825 100b705d1bdff42d7524e9ef5b0a54d7 164 Gene3D G3DSA:2.40.100.10 1 163 9.7E-63 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily M892_27825 100b705d1bdff42d7524e9ef5b0a54d7 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 5.5E-10 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 M892_27825 100b705d1bdff42d7524e9ef5b0a54d7 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 5.5E-10 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 M892_27825 100b705d1bdff42d7524e9ef5b0a54d7 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 5.5E-10 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 M892_27825 100b705d1bdff42d7524e9ef5b0a54d7 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 2 161 3.8E-46 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 M892_27825 100b705d1bdff42d7524e9ef5b0a54d7 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 12-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 M892_19640 eed2b070a6f94eb504c68166eedba47e 219 Pfam PF12710 haloacid dehalogenase-like hydrolase 7 189 1.1E-27 T 12-10-2018 M892_19640 eed2b070a6f94eb504c68166eedba47e 219 SUPERFAMILY SSF56784 1 210 7.34E-31 T 12-10-2018 IPR036412 HAD-like superfamily M892_19640 eed2b070a6f94eb504c68166eedba47e 219 Gene3D G3DSA:3.40.50.1000 6 216 1.3E-54 T 12-10-2018 IPR023214 HAD superfamily M892_19640 eed2b070a6f94eb504c68166eedba47e 219 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 5 204 9.1E-49 T 12-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like M892_19640 eed2b070a6f94eb504c68166eedba47e 219 Gene3D G3DSA:1.20.1440.100 17 90 1.3E-54 T 12-10-2018 M892_19640 eed2b070a6f94eb504c68166eedba47e 219 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 190 6.7E-25 T 12-10-2018 M892_01655 daa40aeec300f636802a5b81ebeb3a9a 220 SUPERFAMILY SSF48657 15 129 4.19E-39 T 12-10-2018 IPR036442 ProQ/FinO domain superfamily M892_01655 daa40aeec300f636802a5b81ebeb3a9a 220 Hamap MF_00749 RNA chaperone ProQ [proQ]. 13 220 30.01 T 12-10-2018 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 M892_01655 daa40aeec300f636802a5b81ebeb3a9a 220 SMART SM00945 15 129 3.7E-64 T 12-10-2018 IPR016103 ProQ/FinO domain M892_01655 daa40aeec300f636802a5b81ebeb3a9a 220 Pfam PF04352 ProQ/FINO family 18 125 4.5E-42 T 12-10-2018 IPR016103 ProQ/FinO domain M892_01655 daa40aeec300f636802a5b81ebeb3a9a 220 Gene3D G3DSA:1.10.1710.10 5 131 6.9E-25 T 12-10-2018 IPR036442 ProQ/FinO domain superfamily M892_01655 daa40aeec300f636802a5b81ebeb3a9a 220 Pfam PF17516 ProQ C-terminal domain 171 219 5.1E-22 T 12-10-2018 IPR035236 RNA chaperone ProQ, C-terminal M892_14925 08277fba1126d41a55ae12627ff147cb 452 Gene3D G3DSA:2.30.42.10 126 221 1.4E-32 T 12-10-2018 M892_14925 08277fba1126d41a55ae12627ff147cb 452 SUPERFAMILY SSF50156 196 293 3.02E-17 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 M892_14925 08277fba1126d41a55ae12627ff147cb 452 SMART SM00228 212 281 3.0E-10 T 12-10-2018 IPR001478 PDZ domain GO:0005515 M892_14925 08277fba1126d41a55ae12627ff147cb 452 SMART SM00228 115 186 1.1 T 12-10-2018 IPR001478 PDZ domain GO:0005515 M892_14925 08277fba1126d41a55ae12627ff147cb 452 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 227 276 1.6E-10 T 12-10-2018 IPR001478 PDZ domain GO:0005515 M892_14925 08277fba1126d41a55ae12627ff147cb 452 Pfam PF02163 Peptidase family M50 11 440 1.2E-87 T 12-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 M892_14925 08277fba1126d41a55ae12627ff147cb 452 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 4 452 4.7E-142 T 12-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 M892_14925 08277fba1126d41a55ae12627ff147cb 452 Gene3D G3DSA:2.30.42.10 227 313 2.2E-21 T 12-10-2018 M892_14925 08277fba1126d41a55ae12627ff147cb 452 SUPERFAMILY SSF50156 89 184 8.28E-11 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 M892_16125 665d65d6a20357719b265893b1c48493 217 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 3.0E-18 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 M892_16125 665d65d6a20357719b265893b1c48493 217 SMART SM00478 38 185 3.6E-54 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 M892_16125 665d65d6a20357719b265893b1c48493 217 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 12-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 M892_16125 665d65d6a20357719b265893b1c48493 217 Gene3D G3DSA:1.10.1670.10 11 203 6.7E-77 T 12-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 M892_16125 665d65d6a20357719b265893b1c48493 217 Gene3D G3DSA:1.10.340.30 21 132 6.7E-77 T 12-10-2018 M892_16125 665d65d6a20357719b265893b1c48493 217 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 12-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 M892_16125 665d65d6a20357719b265893b1c48493 217 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 7.8E-5 T 12-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 M892_16125 665d65d6a20357719b265893b1c48493 217 Hamap MF_00942 Endonuclease III [nth]. 1 209 37.45 T 12-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 M892_16125 665d65d6a20357719b265893b1c48493 217 SMART SM00525 186 206 1.1E-5 T 12-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 M892_16125 665d65d6a20357719b265893b1c48493 217 PIRSF PIRSF001435 1 212 8.3E-50 T 12-10-2018 M892_16125 665d65d6a20357719b265893b1c48493 217 TIGRFAM TIGR01083 nth: endonuclease III 5 194 1.6E-87 T 12-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 M892_16125 665d65d6a20357719b265893b1c48493 217 Pfam PF00633 Helix-hairpin-helix motif 100 127 2.1E-7 T 12-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 M892_16125 665d65d6a20357719b265893b1c48493 217 SUPERFAMILY SSF48150 5 205 1.05E-69 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 M892_03250 1b2da03bc5cdbc71e0831642cd1a937c 168 Pfam PF04985 Phage tail tube protein FII 5 166 1.4E-22 T 12-10-2018 IPR006498 Tail tube protein M892_21430 d99d4c3f3911eadd08ba46a37d06b827 461 SUPERFAMILY SSF50615 1 76 2.22E-24 T 12-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M892_21430 d99d4c3f3911eadd08ba46a37d06b827 461 Gene3D G3DSA:3.40.50.300 77 345 6.9E-110 T 12-10-2018 M892_21430 d99d4c3f3911eadd08ba46a37d06b827 461 Gene3D G3DSA:1.10.1140.10 346 461 4.7E-56 T 12-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M892_21430 d99d4c3f3911eadd08ba46a37d06b827 461 SMART SM00382 143 328 4.3E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_21430 d99d4c3f3911eadd08ba46a37d06b827 461 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 334 343 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M892_21430 d99d4c3f3911eadd08ba46a37d06b827 461 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 461 56.096 T 12-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 M892_21430 d99d4c3f3911eadd08ba46a37d06b827 461 Gene3D G3DSA:2.40.10.170 1 76 2.9E-28 T 12-10-2018 M892_21430 d99d4c3f3911eadd08ba46a37d06b827 461 SUPERFAMILY SSF52540 78 348 7.55E-89 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_21430 d99d4c3f3911eadd08ba46a37d06b827 461 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 131 343 5.3E-63 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M892_21430 d99d4c3f3911eadd08ba46a37d06b827 461 SUPERFAMILY SSF47917 346 460 1.18E-52 T 12-10-2018 M892_21430 d99d4c3f3911eadd08ba46a37d06b827 461 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 461 1.9E-251 T 12-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 M892_21430 d99d4c3f3911eadd08ba46a37d06b827 461 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 74 4.4E-21 T 12-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M892_16965 62f801e57de927b76f32d701e6d62f22 222 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 13 135 5.0E-63 T 12-10-2018 IPR013559 YheO-like M892_16965 62f801e57de927b76f32d701e6d62f22 222 Pfam PF13309 HTH domain 160 217 5.3E-13 T 12-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain M892_16965 62f801e57de927b76f32d701e6d62f22 222 Pfam PF08348 YheO-like PAS domain 17 123 1.0E-34 T 12-10-2018 IPR013559 YheO-like M892_09810 124bfb6dcd2d9d17be2640bba924c97d 204 Pfam PF12019 Type II transport protein GspH 45 185 1.6E-8 T 12-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 M892_09810 124bfb6dcd2d9d17be2640bba924c97d 204 Gene3D G3DSA:3.55.40.10 36 203 1.1E-45 T 12-10-2018 M892_09810 124bfb6dcd2d9d17be2640bba924c97d 204 PRINTS PR00885 Bacterial general secretion pathway protein H signature 5 19 5.2E-21 T 12-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 M892_09810 124bfb6dcd2d9d17be2640bba924c97d 204 PRINTS PR00885 Bacterial general secretion pathway protein H signature 20 34 5.2E-21 T 12-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 M892_09810 124bfb6dcd2d9d17be2640bba924c97d 204 PRINTS PR00885 Bacterial general secretion pathway protein H signature 148 163 5.2E-21 T 12-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 M892_09810 124bfb6dcd2d9d17be2640bba924c97d 204 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 30 8.2E-5 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M892_09810 124bfb6dcd2d9d17be2640bba924c97d 204 Pfam PF07963 Prokaryotic N-terminal methylation motif 4 29 3.4E-5 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M892_09810 124bfb6dcd2d9d17be2640bba924c97d 204 SUPERFAMILY SSF54523 10 93 7.85E-10 T 12-10-2018 M892_15310 148cc96bc3937e1664149bd16074beae 89 PIRSF PIRSF004669 1 89 3.5E-30 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 M892_15310 148cc96bc3937e1664149bd16074beae 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 5.6E-17 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 M892_15310 148cc96bc3937e1664149bd16074beae 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 5.6E-17 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 M892_15310 148cc96bc3937e1664149bd16074beae 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 5.6E-17 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 M892_15310 148cc96bc3937e1664149bd16074beae 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 2.5E-28 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 M892_15310 148cc96bc3937e1664149bd16074beae 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 1.6E-32 T 12-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 M892_12775 c1eeeb1e2108cd5162040211ced02813 347 Gene3D G3DSA:3.30.420.40 14 331 5.4E-131 T 12-10-2018 M892_12775 c1eeeb1e2108cd5162040211ced02813 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 339 1.4E-165 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 M892_12775 c1eeeb1e2108cd5162040211ced02813 347 Gene3D G3DSA:3.90.640.10 190 263 5.4E-131 T 12-10-2018 M892_12775 c1eeeb1e2108cd5162040211ced02813 347 SUPERFAMILY SSF53067 154 340 5.11E-50 T 12-10-2018 M892_12775 c1eeeb1e2108cd5162040211ced02813 347 SUPERFAMILY SSF53067 9 152 2.35E-37 T 12-10-2018 M892_12775 c1eeeb1e2108cd5162040211ced02813 347 Pfam PF06723 MreB/Mbl protein 11 338 1.8E-148 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 M892_12775 c1eeeb1e2108cd5162040211ced02813 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 2.5E-63 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 M892_12775 c1eeeb1e2108cd5162040211ced02813 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 2.5E-63 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 M892_12775 c1eeeb1e2108cd5162040211ced02813 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 2.5E-63 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 M892_12775 c1eeeb1e2108cd5162040211ced02813 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 2.5E-63 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 M892_12775 c1eeeb1e2108cd5162040211ced02813 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 2.5E-63 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 M892_12775 c1eeeb1e2108cd5162040211ced02813 347 Gene3D G3DSA:3.30.420.40 158 321 5.4E-131 T 12-10-2018 M892_22825 15d7304710ebed5cc5ad559ab6700a0d 461 Pfam PF05707 Zonular occludens toxin (Zot) 2 255 5.6E-76 T 12-10-2018 IPR008900 Zona occludens toxin M892_14975 da8e2725768cd6477a5455e28d2a73d0 448 Pfam PF01171 PP-loop family 21 209 1.2E-54 T 12-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 M892_14975 da8e2725768cd6477a5455e28d2a73d0 448 SUPERFAMILY SSF56037 332 446 1.18E-27 T 12-10-2018 M892_14975 da8e2725768cd6477a5455e28d2a73d0 448 SUPERFAMILY SSF82829 249 329 4.84E-24 T 12-10-2018 M892_14975 da8e2725768cd6477a5455e28d2a73d0 448 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 21 213 4.1E-51 T 12-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 M892_14975 da8e2725768cd6477a5455e28d2a73d0 448 Gene3D G3DSA:3.40.50.620 11 243 5.3E-70 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M892_14975 da8e2725768cd6477a5455e28d2a73d0 448 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 8 319 23.092 T 12-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 M892_14975 da8e2725768cd6477a5455e28d2a73d0 448 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 375 421 5.6E-16 T 12-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 M892_14975 da8e2725768cd6477a5455e28d2a73d0 448 Pfam PF11734 TilS substrate C-terminal domain 375 445 1.9E-24 T 12-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 M892_14975 da8e2725768cd6477a5455e28d2a73d0 448 Pfam PF09179 TilS substrate binding domain 258 325 8.7E-19 T 12-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 M892_14975 da8e2725768cd6477a5455e28d2a73d0 448 Gene3D G3DSA:1.20.59.20 245 329 1.2E-26 T 12-10-2018 M892_14975 da8e2725768cd6477a5455e28d2a73d0 448 SMART SM00977 375 444 5.0E-23 T 12-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 M892_14975 da8e2725768cd6477a5455e28d2a73d0 448 SUPERFAMILY SSF52402 13 243 1.5E-59 T 12-10-2018 M892_09180 580cdffbfc77cf4dc978ab7b0d9205e9 63 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 12-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_09180 580cdffbfc77cf4dc978ab7b0d9205e9 63 SUPERFAMILY SSF46561 1 61 2.09E-23 T 12-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_09180 580cdffbfc77cf4dc978ab7b0d9205e9 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 19.306 T 12-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_09180 580cdffbfc77cf4dc978ab7b0d9205e9 63 Gene3D G3DSA:1.10.287.310 1 63 1.6E-31 T 12-10-2018 M892_09180 580cdffbfc77cf4dc978ab7b0d9205e9 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 7.4E-24 T 12-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_09180 580cdffbfc77cf4dc978ab7b0d9205e9 63 Pfam PF00831 Ribosomal L29 protein 4 60 1.8E-25 T 12-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_13700 5135a4e3eca71d2d0e38efe658a8cf28 247 Gene3D G3DSA:3.40.1280.10 1 160 4.1E-67 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal M892_13700 5135a4e3eca71d2d0e38efe658a8cf28 247 SUPERFAMILY SSF75217 1 245 4.32E-102 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases M892_13700 5135a4e3eca71d2d0e38efe658a8cf28 247 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 234 3.3E-109 T 12-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 M892_13700 5135a4e3eca71d2d0e38efe658a8cf28 247 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 1.3E-69 T 12-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 M892_13700 5135a4e3eca71d2d0e38efe658a8cf28 247 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 247 117.893 T 12-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 M892_13700 5135a4e3eca71d2d0e38efe658a8cf28 247 PIRSF PIRSF000386 1 246 2.7E-100 T 12-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 M892_13700 5135a4e3eca71d2d0e38efe658a8cf28 247 Gene3D G3DSA:1.10.1270.20 161 247 1.1E-34 T 12-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 M892_09720 d5a31d8c2a00f1bc7610d4dd235a4f66 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 409 4.2E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_09720 d5a31d8c2a00f1bc7610d4dd235a4f66 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 358 372 4.2E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_09720 d5a31d8c2a00f1bc7610d4dd235a4f66 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 386 4.2E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_09720 d5a31d8c2a00f1bc7610d4dd235a4f66 430 SUPERFAMILY SSF47384 215 277 5.49E-12 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M892_09720 d5a31d8c2a00f1bc7610d4dd235a4f66 430 Pfam PF00672 HAMP domain 169 217 6.3E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M892_09720 d5a31d8c2a00f1bc7610d4dd235a4f66 430 Pfam PF00512 His Kinase A (phospho-acceptor) domain 225 276 2.7E-9 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M892_09720 d5a31d8c2a00f1bc7610d4dd235a4f66 430 SUPERFAMILY SSF55874 285 429 1.06E-33 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_09720 d5a31d8c2a00f1bc7610d4dd235a4f66 430 SMART SM00304 169 221 4.6E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M892_09720 d5a31d8c2a00f1bc7610d4dd235a4f66 430 Gene3D G3DSA:3.30.565.10 284 430 1.3E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_09720 d5a31d8c2a00f1bc7610d4dd235a4f66 430 SMART SM00388 222 282 2.3E-9 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M892_09720 d5a31d8c2a00f1bc7610d4dd235a4f66 430 Gene3D G3DSA:1.10.287.130 167 277 1.7E-23 T 12-10-2018 M892_09720 d5a31d8c2a00f1bc7610d4dd235a4f66 430 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 323 428 4.6E-20 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_09720 d5a31d8c2a00f1bc7610d4dd235a4f66 430 SMART SM00387 321 430 1.7E-27 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_13265 38a814a3e9756b352372952959b76e55 231 SUPERFAMILY SSF54060 20 228 1.29E-94 T 12-10-2018 M892_13265 38a814a3e9756b352372952959b76e55 231 Pfam PF04231 Endonuclease I 33 227 5.9E-47 T 12-10-2018 IPR007346 Endonuclease I GO:0004518 M892_26345 a9eb2af130a11aaa71a45f6eedbb95b3 255 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 231 243 - T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 M892_26345 a9eb2af130a11aaa71a45f6eedbb95b3 255 Pfam PF00813 FliP family 58 250 2.9E-75 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 M892_26345 a9eb2af130a11aaa71a45f6eedbb95b3 255 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 154 166 2.3E-13 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 M892_26345 a9eb2af130a11aaa71a45f6eedbb95b3 255 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 114 126 2.3E-13 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 M892_26345 a9eb2af130a11aaa71a45f6eedbb95b3 255 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 244 254 2.3E-13 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 M892_26345 a9eb2af130a11aaa71a45f6eedbb95b3 255 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 54 63 2.3E-13 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 M892_26345 a9eb2af130a11aaa71a45f6eedbb95b3 255 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 176 188 2.3E-13 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 M892_26345 a9eb2af130a11aaa71a45f6eedbb95b3 255 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 126 140 2.3E-13 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 M892_26345 a9eb2af130a11aaa71a45f6eedbb95b3 255 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 183 198 - T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 M892_26345 a9eb2af130a11aaa71a45f6eedbb95b3 255 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 204 225 3.9E-65 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 M892_26345 a9eb2af130a11aaa71a45f6eedbb95b3 255 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 183 203 3.9E-65 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 M892_26345 a9eb2af130a11aaa71a45f6eedbb95b3 255 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 56 75 3.9E-65 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 M892_26345 a9eb2af130a11aaa71a45f6eedbb95b3 255 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 228 253 3.9E-65 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 M892_26345 a9eb2af130a11aaa71a45f6eedbb95b3 255 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 75 95 3.9E-65 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 M892_26345 a9eb2af130a11aaa71a45f6eedbb95b3 255 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 95 114 3.9E-65 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 M892_26345 a9eb2af130a11aaa71a45f6eedbb95b3 255 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 58 254 3.7E-76 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 M892_13640 665e6ed5f12895cad08a7b21da81f7bb 376 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 20 374 2.5E-158 T 12-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 M892_13640 665e6ed5f12895cad08a7b21da81f7bb 376 PIRSF PIRSF015658 1 376 4.1E-178 T 12-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 M892_13640 665e6ed5f12895cad08a7b21da81f7bb 376 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 19 370 8.1E-170 T 12-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 M892_18055 30c5fe0789f03380dbd35e79ad3cdca9 272 Pfam PF04954 Siderophore-interacting protein 142 253 2.3E-31 T 12-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain M892_18055 30c5fe0789f03380dbd35e79ad3cdca9 272 Gene3D G3DSA:2.40.30.10 15 134 5.4E-31 T 12-10-2018 M892_18055 30c5fe0789f03380dbd35e79ad3cdca9 272 Pfam PF08021 Siderophore-interacting FAD-binding domain 27 134 9.8E-32 T 12-10-2018 IPR013113 FAD-binding 9, siderophore-interacting M892_18055 30c5fe0789f03380dbd35e79ad3cdca9 272 SUPERFAMILY SSF63380 16 133 7.56E-10 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel M892_18055 30c5fe0789f03380dbd35e79ad3cdca9 272 Gene3D G3DSA:3.40.50.80 137 272 1.8E-45 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain M892_11575 bc3107ab436bf8bddc1e35335ad3cd0a 195 Gene3D G3DSA:1.20.1590.10 2 195 1.3E-66 T 12-10-2018 IPR023381 YP001051499.1-like domain superfamily M892_11575 bc3107ab436bf8bddc1e35335ad3cd0a 195 Pfam PF04222 Protein of unknown function (DUF416) 6 193 4.6E-77 T 12-10-2018 IPR007338 Protein of unknown function DUF416 M892_09050 147370b2964a88283e30d4c4102aa92e 190 SUPERFAMILY SSF51206 16 136 1.24E-21 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like M892_09050 147370b2964a88283e30d4c4102aa92e 190 Gene3D G3DSA:2.60.120.10 2 140 1.3E-20 T 12-10-2018 IPR014710 RmlC-like jelly roll fold M892_09050 147370b2964a88283e30d4c4102aa92e 190 Pfam PF00027 Cyclic nucleotide-binding domain 30 112 3.2E-9 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain M892_04680 269351d8e449e3f0f0418b14d9178350 135 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 33 129 5.6E-9 T 12-10-2018 IPR039366 YscW/ExsB M892_04680 269351d8e449e3f0f0418b14d9178350 135 TIGRFAM TIGR02567 YscW: type III secretion system chaperone YscW 9 129 2.3E-27 T 12-10-2018 IPR013400 Type III secretion system chaperone, YscW M892_12895 8d06a6ebb678722d1ea08ede573f0bce 323 PIRSF PIRSF004692 1 323 2.5E-131 T 12-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 M892_12895 8d06a6ebb678722d1ea08ede573f0bce 323 Pfam PF01380 SIS domain 41 172 2.0E-31 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 M892_12895 8d06a6ebb678722d1ea08ede573f0bce 323 SMART SM00116 275 322 0.62 T 12-10-2018 IPR000644 CBS domain M892_12895 8d06a6ebb678722d1ea08ede573f0bce 323 SMART SM00116 210 258 0.72 T 12-10-2018 IPR000644 CBS domain M892_12895 8d06a6ebb678722d1ea08ede573f0bce 323 Gene3D G3DSA:3.40.50.10490 5 195 2.4E-64 T 12-10-2018 M892_12895 8d06a6ebb678722d1ea08ede573f0bce 323 Pfam PF00571 CBS domain 268 320 1.4E-6 T 12-10-2018 IPR000644 CBS domain M892_12895 8d06a6ebb678722d1ea08ede573f0bce 323 Pfam PF00571 CBS domain 211 258 1.3E-4 T 12-10-2018 IPR000644 CBS domain M892_12895 8d06a6ebb678722d1ea08ede573f0bce 323 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 45 313 7.8E-113 T 12-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 M892_12895 8d06a6ebb678722d1ea08ede573f0bce 323 SUPERFAMILY SSF53697 11 318 7.12E-69 T 12-10-2018 M892_12895 8d06a6ebb678722d1ea08ede573f0bce 323 Gene3D G3DSA:3.10.580.10 196 320 6.1E-44 T 12-10-2018 M892_24945 657b6a54aca70f58e77ed82c8a196580 232 Gene3D G3DSA:3.40.50.360 27 207 1.9E-53 T 12-10-2018 IPR029039 Flavoprotein-like superfamily M892_24945 657b6a54aca70f58e77ed82c8a196580 232 SUPERFAMILY SSF52218 31 207 3.77E-50 T 12-10-2018 IPR029039 Flavoprotein-like superfamily M892_24945 657b6a54aca70f58e77ed82c8a196580 232 Pfam PF02525 Flavodoxin-like fold 31 200 6.4E-45 T 12-10-2018 IPR003680 Flavodoxin-like fold M892_02525 5c107540d564e4b9f5dc889d679db849 304 PRINTS PR00251 Bacterial opsin signature 243 261 1.9E-6 T 12-10-2018 IPR001425 Archaeal/bacterial/fungal rhodopsins GO:0005216|GO:0006811|GO:0016020 M892_02525 5c107540d564e4b9f5dc889d679db849 304 PRINTS PR00251 Bacterial opsin signature 177 196 1.9E-6 T 12-10-2018 IPR001425 Archaeal/bacterial/fungal rhodopsins GO:0005216|GO:0006811|GO:0016020 M892_02525 5c107540d564e4b9f5dc889d679db849 304 PRINTS PR00251 Bacterial opsin signature 274 292 1.9E-6 T 12-10-2018 IPR001425 Archaeal/bacterial/fungal rhodopsins GO:0005216|GO:0006811|GO:0016020 M892_02525 5c107540d564e4b9f5dc889d679db849 304 PRINTS PR00251 Bacterial opsin signature 114 134 1.9E-6 T 12-10-2018 IPR001425 Archaeal/bacterial/fungal rhodopsins GO:0005216|GO:0006811|GO:0016020 M892_02525 5c107540d564e4b9f5dc889d679db849 304 SMART SM01021 82 304 1.5E-55 T 12-10-2018 IPR001425 Archaeal/bacterial/fungal rhodopsins GO:0005216|GO:0006811|GO:0016020 M892_02525 5c107540d564e4b9f5dc889d679db849 304 PIRSF PIRSF038142 55 304 1.9E-100 T 12-10-2018 IPR017402 Proteorhodopsin GO:0006811|GO:0010461|GO:0016020 M892_02525 5c107540d564e4b9f5dc889d679db849 304 Gene3D G3DSA:1.20.1070.10 74 304 1.4E-84 T 12-10-2018 M892_02525 5c107540d564e4b9f5dc889d679db849 304 Pfam PF01036 Bacteriorhodopsin-like protein 84 300 4.4E-42 T 12-10-2018 IPR001425 Archaeal/bacterial/fungal rhodopsins GO:0005216|GO:0006811|GO:0016020 M892_02525 5c107540d564e4b9f5dc889d679db849 304 SUPERFAMILY SSF81321 80 297 2.59E-68 T 12-10-2018 M892_02525 5c107540d564e4b9f5dc889d679db849 304 ProSitePatterns PS00950 Bacterial rhodopsins signature 1. 147 159 - T 12-10-2018 IPR018229 Rhodopsin, retinal binding site GO:0005216|GO:0006811|GO:0016020 M892_00285 c564376110f520ab530224d810a38480 374 Gene3D G3DSA:2.40.370.10 253 374 7.3E-23 T 12-10-2018 IPR023374 AttH-like domain superfamily M892_00285 c564376110f520ab530224d810a38480 374 SUPERFAMILY SSF159245 56 374 6.28E-92 T 12-10-2018 M892_00285 c564376110f520ab530224d810a38480 374 Gene3D G3DSA:2.40.370.10 67 251 1.7E-53 T 12-10-2018 IPR023374 AttH-like domain superfamily M892_00285 c564376110f520ab530224d810a38480 374 Pfam PF17186 Lipocalin-like domain 252 374 6.6E-33 T 12-10-2018 M892_00285 c564376110f520ab530224d810a38480 374 Pfam PF07143 CrtC N-terminal lipocalin domain 79 248 4.7E-44 T 12-10-2018 IPR010791 AttH domain M892_19795 050278f76598e0d1a9a3f0d7cd28771b 234 Gene3D G3DSA:3.30.870.10 50 233 5.9E-50 T 12-10-2018 M892_19795 050278f76598e0d1a9a3f0d7cd28771b 234 Pfam PF13091 PLD-like domain 102 225 2.8E-28 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 M892_19795 050278f76598e0d1a9a3f0d7cd28771b 234 SUPERFAMILY SSF56024 89 226 1.08E-29 T 12-10-2018 M892_11330 53ab310191d55164df6b90d1e77bc229 281 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 66 272 8.5E-43 T 12-10-2018 IPR000477 Reverse transcriptase domain M892_11330 53ab310191d55164df6b90d1e77bc229 281 SUPERFAMILY SSF56672 15 279 6.99E-49 T 12-10-2018 M892_11330 53ab310191d55164df6b90d1e77bc229 281 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 187 200 1.1E-6 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M892_11330 53ab310191d55164df6b90d1e77bc229 281 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 129 147 1.1E-6 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M892_11330 53ab310191d55164df6b90d1e77bc229 281 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 61 74 1.1E-6 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M892_11330 53ab310191d55164df6b90d1e77bc229 281 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 8 273 1.3E-101 T 12-10-2018 IPR030931 Group II intron reverse transcriptase/maturase M892_18830 6e62815547172218ba065cd381f48bf7 142 Pfam PF05618 Putative ATP-dependant zinc protease 6 138 2.2E-31 T 12-10-2018 M892_18830 6e62815547172218ba065cd381f48bf7 142 Gene3D G3DSA:2.40.70.10 3 133 2.0E-32 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily M892_18830 6e62815547172218ba065cd381f48bf7 142 SUPERFAMILY SSF50630 6 140 3.5E-42 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily M892_22720 ac58c6e18983d48a14ae7f9397be6f87 251 SUPERFAMILY SSF88713 7 249 3.63E-92 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 M892_22720 ac58c6e18983d48a14ae7f9397be6f87 251 Gene3D G3DSA:3.20.20.370 6 251 6.0E-98 T 12-10-2018 M892_22720 ac58c6e18983d48a14ae7f9397be6f87 251 Pfam PF03746 LamB/YcsF family 9 246 5.4E-95 T 12-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 M892_22720 ac58c6e18983d48a14ae7f9397be6f87 251 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 6 251 43.546 T 12-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 M892_22295 a2407e10753c30ace448fa135e3c24ff 240 Gene3D G3DSA:3.40.109.10 1 239 3.5E-46 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 M892_22295 a2407e10753c30ace448fa135e3c24ff 240 SUPERFAMILY SSF55469 7 236 7.85E-42 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 M892_22295 a2407e10753c30ace448fa135e3c24ff 240 Pfam PF00881 Nitroreductase family 13 217 3.0E-28 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 M892_00370 775a28b20933bc833d5c1fb344c17ed0 195 SUPERFAMILY SSF159894 3 102 4.97E-27 T 12-10-2018 M892_00370 775a28b20933bc833d5c1fb344c17ed0 195 Pfam PF04994 TfoX C-terminal domain 114 192 1.1E-27 T 12-10-2018 IPR007077 TfoX, C-terminal M892_00370 775a28b20933bc833d5c1fb344c17ed0 195 Gene3D G3DSA:3.30.1460.30 4 102 5.4E-18 T 12-10-2018 M892_00370 775a28b20933bc833d5c1fb344c17ed0 195 Pfam PF04993 TfoX N-terminal domain 11 99 6.2E-23 T 12-10-2018 IPR007076 TfoX, N-terminal M892_00370 775a28b20933bc833d5c1fb344c17ed0 195 Gene3D G3DSA:1.10.150.20 113 195 1.1E-16 T 12-10-2018 M892_00370 775a28b20933bc833d5c1fb344c17ed0 195 PIRSF PIRSF028788 4 195 3.0E-37 T 12-10-2018 IPR026256 Transcriptional regulator, TfoX/Sxy-type M892_20600 ffd4d73080bdbaf2ec7304456c82e36b 715 Pfam PF07715 TonB-dependent Receptor Plug Domain 59 161 1.1E-18 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain M892_20600 ffd4d73080bdbaf2ec7304456c82e36b 715 Pfam PF00593 TonB dependent receptor 239 713 4.0E-60 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel M892_20600 ffd4d73080bdbaf2ec7304456c82e36b 715 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 45 - T 12-10-2018 IPR010916 TonB box, conserved site M892_20600 ffd4d73080bdbaf2ec7304456c82e36b 715 Gene3D G3DSA:2.40.170.20 170 715 3.7E-133 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily M892_20600 ffd4d73080bdbaf2ec7304456c82e36b 715 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 60 715 3.2E-120 T 12-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 M892_20600 ffd4d73080bdbaf2ec7304456c82e36b 715 SUPERFAMILY SSF56935 26 715 1.93E-138 T 12-10-2018 M892_20600 ffd4d73080bdbaf2ec7304456c82e36b 715 Gene3D G3DSA:2.170.130.10 40 169 7.0E-33 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily M892_08305 53c00fbd51891524d6a0e72460e88642 286 Pfam PF03466 LysR substrate binding domain 92 276 1.7E-12 T 12-10-2018 IPR005119 LysR, substrate-binding M892_08305 53c00fbd51891524d6a0e72460e88642 286 SUPERFAMILY SSF46785 4 85 1.26E-12 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_08305 53c00fbd51891524d6a0e72460e88642 286 Gene3D G3DSA:1.10.10.10 4 68 8.2E-14 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_08305 53c00fbd51891524d6a0e72460e88642 286 SUPERFAMILY SSF53850 90 280 1.05E-16 T 12-10-2018 M892_08305 53c00fbd51891524d6a0e72460e88642 286 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 3.0E-13 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_08305 53c00fbd51891524d6a0e72460e88642 286 Gene3D G3DSA:3.40.190.290 91 283 1.8E-6 T 12-10-2018 M892_23110 5d14e261228c644833c845cf8e27fcb8 567 Gene3D G3DSA:3.50.50.60 115 461 1.9E-189 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_23110 5d14e261228c644833c845cf8e27fcb8 567 Pfam PF00581 Rhodanese-like domain 483 563 7.5E-10 T 12-10-2018 IPR001763 Rhodanese-like domain M892_23110 5d14e261228c644833c845cf8e27fcb8 567 SMART SM00450 473 567 1.6E-14 T 12-10-2018 IPR001763 Rhodanese-like domain M892_23110 5d14e261228c644833c845cf8e27fcb8 567 SUPERFAMILY SSF51905 155 340 2.64E-29 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_23110 5d14e261228c644833c845cf8e27fcb8 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 2.8E-23 T 12-10-2018 M892_23110 5d14e261228c644833c845cf8e27fcb8 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 2.8E-23 T 12-10-2018 M892_23110 5d14e261228c644833c845cf8e27fcb8 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 153 171 2.8E-23 T 12-10-2018 M892_23110 5d14e261228c644833c845cf8e27fcb8 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 2.8E-23 T 12-10-2018 M892_23110 5d14e261228c644833c845cf8e27fcb8 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 256 272 2.8E-23 T 12-10-2018 M892_23110 5d14e261228c644833c845cf8e27fcb8 567 SUPERFAMILY SSF52821 458 563 1.11E-24 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily M892_23110 5d14e261228c644833c845cf8e27fcb8 567 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 350 451 1.7E-16 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 M892_23110 5d14e261228c644833c845cf8e27fcb8 567 SUPERFAMILY SSF51905 2 197 7.5E-40 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_23110 5d14e261228c644833c845cf8e27fcb8 567 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 328 1.5E-54 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 M892_23110 5d14e261228c644833c845cf8e27fcb8 567 Gene3D G3DSA:3.40.250.10 471 565 3.1E-25 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily M892_23110 5d14e261228c644833c845cf8e27fcb8 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 7.4E-21 T 12-10-2018 M892_23110 5d14e261228c644833c845cf8e27fcb8 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 257 271 7.4E-21 T 12-10-2018 M892_23110 5d14e261228c644833c845cf8e27fcb8 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 7.4E-21 T 12-10-2018 M892_23110 5d14e261228c644833c845cf8e27fcb8 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 153 178 7.4E-21 T 12-10-2018 M892_23110 5d14e261228c644833c845cf8e27fcb8 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 7.4E-21 T 12-10-2018 M892_23110 5d14e261228c644833c845cf8e27fcb8 567 Gene3D G3DSA:3.50.50.60 3 361 1.9E-189 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_23110 5d14e261228c644833c845cf8e27fcb8 567 SUPERFAMILY SSF55424 344 467 8.42E-35 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 M892_19410 874711fcf3abfd3209b2941b2ea641a4 466 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 374 457 4.4E-33 T 12-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 M892_19410 874711fcf3abfd3209b2941b2ea641a4 466 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 375 465 4.6E-17 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 M892_19410 874711fcf3abfd3209b2941b2ea641a4 466 Gene3D G3DSA:3.40.50.2300 366 466 1.1E-34 T 12-10-2018 M892_19410 874711fcf3abfd3209b2941b2ea641a4 466 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 13 341 4.4E-76 T 12-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 M892_19410 874711fcf3abfd3209b2941b2ea641a4 466 SUPERFAMILY SSF52794 372 465 3.66E-29 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 M892_03690 8a98cd7f73fe09765aa3876d83a8c144 261 SMART SM00421 197 254 6.0E-15 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_03690 8a98cd7f73fe09765aa3876d83a8c144 261 SUPERFAMILY SSF46894 192 259 4.42E-17 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M892_03690 8a98cd7f73fe09765aa3876d83a8c144 261 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 230 242 4.5E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_03690 8a98cd7f73fe09765aa3876d83a8c144 261 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 214 230 4.5E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_03690 8a98cd7f73fe09765aa3876d83a8c144 261 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 200 214 4.5E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_03690 8a98cd7f73fe09765aa3876d83a8c144 261 Pfam PF00196 Bacterial regulatory proteins, luxR family 199 254 1.9E-15 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_03690 8a98cd7f73fe09765aa3876d83a8c144 261 Gene3D G3DSA:1.10.10.10 188 260 4.0E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_25420 bb191c3e34d16729723f18a5679ad527 409 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 154 172 2.6E-9 T 12-10-2018 M892_25420 bb191c3e34d16729723f18a5679ad527 409 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 2.6E-9 T 12-10-2018 M892_25420 bb191c3e34d16729723f18a5679ad527 409 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 104 122 2.6E-9 T 12-10-2018 M892_25420 bb191c3e34d16729723f18a5679ad527 409 SUPERFAMILY SSF51905 154 322 2.96E-21 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_25420 bb191c3e34d16729723f18a5679ad527 409 Gene3D G3DSA:3.50.50.100 1 385 3.7E-101 T 12-10-2018 M892_25420 bb191c3e34d16729723f18a5679ad527 409 SUPERFAMILY SSF51905 3 201 2.0E-31 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_25420 bb191c3e34d16729723f18a5679ad527 409 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 315 1.2E-52 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 M892_25420 bb191c3e34d16729723f18a5679ad527 409 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 154 179 1.9E-9 T 12-10-2018 M892_25420 bb191c3e34d16729723f18a5679ad527 409 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 287 294 1.9E-9 T 12-10-2018 M892_25420 bb191c3e34d16729723f18a5679ad527 409 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 1.9E-9 T 12-10-2018 M892_24450 0f57d0b5c472ddcd92afa8432be19071 422 Pfam PF01546 Peptidase family M20/M25/M40 152 414 1.4E-12 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 M892_24450 0f57d0b5c472ddcd92afa8432be19071 422 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 86 95 - T 12-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 M892_24450 0f57d0b5c472ddcd92afa8432be19071 422 SUPERFAMILY SSF53187 14 419 8.3E-80 T 12-10-2018 M892_24450 0f57d0b5c472ddcd92afa8432be19071 422 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 151 190 - T 12-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 M892_24450 0f57d0b5c472ddcd92afa8432be19071 422 SUPERFAMILY SSF55031 222 333 1.23E-38 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain M892_24450 0f57d0b5c472ddcd92afa8432be19071 422 Hamap MF_00550 Peptidase T [pepT]. 14 417 57.467 T 12-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 M892_24450 0f57d0b5c472ddcd92afa8432be19071 422 TIGRFAM TIGR01882 peptidase-T: peptidase T 16 419 4.8E-161 T 12-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 M892_24450 0f57d0b5c472ddcd92afa8432be19071 422 PIRSF PIRSF037215 12 421 6.7E-183 T 12-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 M892_24450 0f57d0b5c472ddcd92afa8432be19071 422 Gene3D G3DSA:3.30.70.360 222 332 9.7E-174 T 12-10-2018 M892_24450 0f57d0b5c472ddcd92afa8432be19071 422 Gene3D G3DSA:3.40.630.10 17 413 9.7E-174 T 12-10-2018 M892_24450 0f57d0b5c472ddcd92afa8432be19071 422 Pfam PF07687 Peptidase dimerisation domain 219 316 1.5E-8 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain M892_14425 fd899874e0d8e1259d4de3d4b41c05f8 328 SUPERFAMILY SSF53822 76 321 2.55E-42 T 12-10-2018 IPR028082 Periplasmic binding protein-like I M892_14425 fd899874e0d8e1259d4de3d4b41c05f8 328 Pfam PF13377 Periplasmic binding protein-like domain 167 327 1.4E-31 T 12-10-2018 M892_14425 fd899874e0d8e1259d4de3d4b41c05f8 328 Gene3D G3DSA:3.40.50.2300 79 319 3.0E-45 T 12-10-2018 M892_14425 fd899874e0d8e1259d4de3d4b41c05f8 328 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 49 8.0E-18 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M892_14425 fd899874e0d8e1259d4de3d4b41c05f8 328 SMART SM00354 1 74 2.9E-15 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M892_14425 fd899874e0d8e1259d4de3d4b41c05f8 328 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 12-10-2018 M892_14425 fd899874e0d8e1259d4de3d4b41c05f8 328 Gene3D G3DSA:3.40.50.2300 159 321 3.0E-45 T 12-10-2018 M892_14425 fd899874e0d8e1259d4de3d4b41c05f8 328 SUPERFAMILY SSF47413 1 51 2.53E-12 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 M892_14425 fd899874e0d8e1259d4de3d4b41c05f8 328 Gene3D G3DSA:1.10.260.40 1 60 7.2E-18 T 12-10-2018 M892_14425 fd899874e0d8e1259d4de3d4b41c05f8 328 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.7E-6 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M892_14425 fd899874e0d8e1259d4de3d4b41c05f8 328 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.7E-6 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M892_04640 ba8dc78f848aadd5951c1cab41133c53 82 Gene3D G3DSA:1.20.58.90 1 82 2.7E-12 T 12-10-2018 M892_04640 ba8dc78f848aadd5951c1cab41133c53 82 SUPERFAMILY SSF140129 2 78 4.45E-24 T 12-10-2018 IPR037203 Type III secretion, needle-protein-like superfamily GO:0009405|GO:0015031 M892_04640 ba8dc78f848aadd5951c1cab41133c53 82 TIGRFAM TIGR02105 III_needle: type III secretion apparatus needle protein 11 82 1.8E-22 T 12-10-2018 IPR011841 Type III secretion system, needle protein GO:0008565|GO:0009405|GO:0015031 M892_04640 ba8dc78f848aadd5951c1cab41133c53 82 Pfam PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF 12 82 3.0E-25 T 12-10-2018 IPR021123 Type III secretion, needle-protein-like GO:0009405|GO:0015031 M892_15250 f16df5b6be9a7a559fd4b0e520920900 580 PIRSF PIRSF004862 27 580 9.0E-162 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 M892_15250 f16df5b6be9a7a559fd4b0e520920900 580 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 53 579 1.7E-71 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 M892_15250 f16df5b6be9a7a559fd4b0e520920900 580 PRINTS PR01009 Flagellar M-ring protein signature 181 195 6.2E-22 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 M892_15250 f16df5b6be9a7a559fd4b0e520920900 580 PRINTS PR01009 Flagellar M-ring protein signature 224 242 6.2E-22 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 M892_15250 f16df5b6be9a7a559fd4b0e520920900 580 PRINTS PR01009 Flagellar M-ring protein signature 149 167 6.2E-22 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 M892_15250 f16df5b6be9a7a559fd4b0e520920900 580 PRINTS PR01009 Flagellar M-ring protein signature 374 398 6.2E-22 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 M892_15250 f16df5b6be9a7a559fd4b0e520920900 580 PRINTS PR01009 Flagellar M-ring protein signature 294 312 6.2E-22 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 M892_15250 f16df5b6be9a7a559fd4b0e520920900 580 Gene3D G3DSA:3.30.300.30 151 246 1.3E-10 T 12-10-2018 M892_15250 f16df5b6be9a7a559fd4b0e520920900 580 Pfam PF08345 Flagellar M-ring protein C-terminal 281 451 6.8E-39 T 12-10-2018 IPR013556 Flagellar M-ring C-terminal M892_15250 f16df5b6be9a7a559fd4b0e520920900 580 Pfam PF01514 Secretory protein of YscJ/FliF family 62 248 1.6E-54 T 12-10-2018 IPR006182 Secretory protein YscJ/FliF M892_15150 b589d1c66f98b1e7009d30f518fed2d8 378 Gene3D G3DSA:3.30.70.360 181 294 1.2E-127 T 12-10-2018 M892_15150 b589d1c66f98b1e7009d30f518fed2d8 378 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 4 377 51.947 T 12-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 M892_15150 b589d1c66f98b1e7009d30f518fed2d8 378 Gene3D G3DSA:3.40.630.10 9 364 1.2E-127 T 12-10-2018 M892_15150 b589d1c66f98b1e7009d30f518fed2d8 378 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 7 375 1.6E-179 T 12-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 M892_15150 b589d1c66f98b1e7009d30f518fed2d8 378 SUPERFAMILY SSF55031 181 291 1.14E-28 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain M892_15150 b589d1c66f98b1e7009d30f518fed2d8 378 SUPERFAMILY SSF53187 6 376 2.36E-66 T 12-10-2018 M892_15150 b589d1c66f98b1e7009d30f518fed2d8 378 Pfam PF01546 Peptidase family M20/M25/M40 64 373 2.2E-46 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 M892_15150 b589d1c66f98b1e7009d30f518fed2d8 378 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 99 137 - T 12-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 M892_15150 b589d1c66f98b1e7009d30f518fed2d8 378 Pfam PF07687 Peptidase dimerisation domain 177 284 5.8E-22 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain M892_08255 49a085dcfbdfecbf1f898f24eb341e25 314 Gene3D G3DSA:3.80.30.20 42 272 2.0E-18 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe M892_08255 49a085dcfbdfecbf1f898f24eb341e25 314 SUPERFAMILY SSF102114 13 268 2.22E-51 T 12-10-2018 M892_08255 49a085dcfbdfecbf1f898f24eb341e25 314 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 6 299 1.0E-135 T 12-10-2018 IPR005911 Protein YhcC-like GO:0051536 M892_08255 49a085dcfbdfecbf1f898f24eb341e25 314 SMART SM00729 23 247 4.8E-48 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 M892_08255 49a085dcfbdfecbf1f898f24eb341e25 314 Pfam PF16199 Radical_SAM C-terminal domain 209 279 1.3E-16 T 12-10-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 M892_08255 49a085dcfbdfecbf1f898f24eb341e25 314 Pfam PF04055 Radical SAM superfamily 43 202 4.8E-19 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 M892_16255 d87948c1d345f8b672005f37ecd57a83 721 Pfam PF01515 Phosphate acetyl/butaryl transferase 391 706 4.1E-125 T 12-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 M892_16255 d87948c1d345f8b672005f37ecd57a83 721 Gene3D G3DSA:3.40.50.300 5 217 2.5E-13 T 12-10-2018 M892_16255 d87948c1d345f8b672005f37ecd57a83 721 Gene3D G3DSA:3.40.1390.20 225 365 1.3E-13 T 12-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily M892_16255 d87948c1d345f8b672005f37ecd57a83 721 SUPERFAMILY SSF53659 392 709 1.64E-95 T 12-10-2018 M892_16255 d87948c1d345f8b672005f37ecd57a83 721 Pfam PF07085 DRTGG domain 233 344 1.8E-27 T 12-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 M892_16255 d87948c1d345f8b672005f37ecd57a83 721 Pfam PF13500 AAA domain 3 229 3.2E-50 T 12-10-2018 M892_16255 d87948c1d345f8b672005f37ecd57a83 721 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 406 706 6.8E-132 T 12-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 M892_16255 d87948c1d345f8b672005f37ecd57a83 721 SUPERFAMILY SSF52540 1 240 1.33E-28 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_16255 d87948c1d345f8b672005f37ecd57a83 721 Gene3D G3DSA:3.40.50.10950 398 709 8.4E-134 T 12-10-2018 M892_16255 d87948c1d345f8b672005f37ecd57a83 721 SUPERFAMILY SSF75138 229 353 1.96E-24 T 12-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily M892_16255 d87948c1d345f8b672005f37ecd57a83 721 PIRSF PIRSF006107 1 714 0.0 T 12-10-2018 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 M892_16255 d87948c1d345f8b672005f37ecd57a83 721 Gene3D G3DSA:3.40.50.10750 529 682 8.4E-134 T 12-10-2018 M892_00675 a0370c5100094f6a86b4e8e3949a374b 249 SUPERFAMILY SSF51621 5 245 4.89E-63 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 M892_00675 a0370c5100094f6a86b4e8e3949a374b 249 Gene3D G3DSA:3.20.20.60 1 249 2.1E-70 T 12-10-2018 M892_00675 a0370c5100094f6a86b4e8e3949a374b 249 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 15 237 4.3E-33 T 12-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 M892_12275 fad60455ecade43b4628b3ce7402fe39 81 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 17 75 1.3E-31 T 12-10-2018 IPR012658 Conserved hypothetical protein CHP02443 M892_12275 fad60455ecade43b4628b3ce7402fe39 81 Pfam PF09526 Probable metal-binding protein (DUF2387) 19 67 9.9E-21 T 12-10-2018 IPR012658 Conserved hypothetical protein CHP02443 M892_05500 6c696ae532451d4b0aeacbe145c44b5a 293 TIGRFAM TIGR02721 ycfN_thiK: thiamine kinase 30 284 1.1E-94 T 12-10-2018 IPR014093 Thiamine kinase GO:0006772|GO:0016310|GO:0019165 KEGG: 00730+2.7.1.89|MetaCyc: PWY-6896 M892_05500 6c696ae532451d4b0aeacbe145c44b5a 293 Gene3D G3DSA:3.90.1200.10 113 285 1.3E-13 T 12-10-2018 M892_05500 6c696ae532451d4b0aeacbe145c44b5a 293 SUPERFAMILY SSF56112 24 270 6.71E-38 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily M892_05500 6c696ae532451d4b0aeacbe145c44b5a 293 Pfam PF01636 Phosphotransferase enzyme family 30 230 1.3E-10 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase M892_00245 4b15c0c0d04db8d677d655583556eb31 233 Pfam PF00849 RNA pseudouridylate synthase 61 193 1.6E-18 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 M892_00245 4b15c0c0d04db8d677d655583556eb31 233 Gene3D G3DSA:3.30.70.1560 127 210 5.0E-56 T 12-10-2018 M892_00245 4b15c0c0d04db8d677d655583556eb31 233 Gene3D G3DSA:3.10.290.10 1 61 7.3E-16 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 M892_00245 4b15c0c0d04db8d677d655583556eb31 233 SUPERFAMILY SSF55120 60 228 1.6E-43 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 M892_00245 4b15c0c0d04db8d677d655583556eb31 233 SMART SM00363 1 59 7.1E-10 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_00245 4b15c0c0d04db8d677d655583556eb31 233 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 98 112 - T 12-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 M892_00245 4b15c0c0d04db8d677d655583556eb31 233 Gene3D G3DSA:3.30.70.580 62 228 5.0E-56 T 12-10-2018 M892_00245 4b15c0c0d04db8d677d655583556eb31 233 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 65 225 3.9E-49 T 12-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 M892_00245 4b15c0c0d04db8d677d655583556eb31 233 SUPERFAMILY SSF55174 1 86 5.0E-13 T 12-10-2018 M892_00245 4b15c0c0d04db8d677d655583556eb31 233 Pfam PF01479 S4 domain 1 46 2.3E-10 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_03920 e2bfa9f9c809ae6fac56e91d3641e03c 286 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 14 278 6.2E-114 T 12-10-2018 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 M892_03920 e2bfa9f9c809ae6fac56e91d3641e03c 286 Gene3D G3DSA:1.20.1080.10 27 280 6.4E-96 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 M892_03920 e2bfa9f9c809ae6fac56e91d3641e03c 286 Pfam PF01226 Formate/nitrite transporter 14 275 2.9E-74 T 12-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 M892_03920 e2bfa9f9c809ae6fac56e91d3641e03c 286 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 25 279 1.7E-77 T 12-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 M892_03920 e2bfa9f9c809ae6fac56e91d3641e03c 286 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 82 91 - T 12-10-2018 IPR024002 Formate/nitrite transporter, conserved site M892_09120 587ac2f85fb881bbf91dae7877f35a98 444 SUPERFAMILY SSF103491 15 425 1.18E-130 T 12-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 M892_09120 587ac2f85fb881bbf91dae7877f35a98 444 Gene3D G3DSA:1.10.3370.10 10 430 1.8E-159 T 12-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 M892_09120 587ac2f85fb881bbf91dae7877f35a98 444 PIRSF PIRSF004557 10 442 3.0E-121 T 12-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 M892_09120 587ac2f85fb881bbf91dae7877f35a98 444 ProSitePatterns PS00756 Protein secY signature 2. 171 188 - T 12-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 M892_09120 587ac2f85fb881bbf91dae7877f35a98 444 ProSitePatterns PS00755 Protein secY signature 1. 76 95 - T 12-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 M892_09120 587ac2f85fb881bbf91dae7877f35a98 444 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 20 430 5.0E-134 T 12-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 M892_09120 587ac2f85fb881bbf91dae7877f35a98 444 Hamap MF_01465 Protein translocase subunit SecY [secY]. 9 434 29.051 T 12-10-2018 IPR026593 Protein translocase subunit SecY M892_09120 587ac2f85fb881bbf91dae7877f35a98 444 Pfam PF00344 SecY translocase 76 418 1.6E-117 T 12-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 M892_09120 587ac2f85fb881bbf91dae7877f35a98 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 371 389 1.9E-95 T 12-10-2018 M892_09120 587ac2f85fb881bbf91dae7877f35a98 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 403 421 1.9E-95 T 12-10-2018 M892_09120 587ac2f85fb881bbf91dae7877f35a98 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 152 177 1.9E-95 T 12-10-2018 M892_09120 587ac2f85fb881bbf91dae7877f35a98 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 178 201 1.9E-95 T 12-10-2018 M892_09120 587ac2f85fb881bbf91dae7877f35a98 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 1.9E-95 T 12-10-2018 M892_09120 587ac2f85fb881bbf91dae7877f35a98 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 1.9E-95 T 12-10-2018 M892_09120 587ac2f85fb881bbf91dae7877f35a98 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 316 338 1.9E-95 T 12-10-2018 M892_09120 587ac2f85fb881bbf91dae7877f35a98 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 1.9E-95 T 12-10-2018 M892_09120 587ac2f85fb881bbf91dae7877f35a98 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 270 289 1.9E-95 T 12-10-2018 M892_14690 3cecf7e1fbc7a4a0677415885277475b 219 Pfam PF12973 ChrR Cupin-like domain 127 193 2.6E-13 T 12-10-2018 IPR025979 ChrR-like cupin domain M892_14690 3cecf7e1fbc7a4a0677415885277475b 219 Pfam PF13490 Putative zinc-finger 8 37 4.6E-5 T 12-10-2018 IPR027383 Putative zinc-finger M892_14690 3cecf7e1fbc7a4a0677415885277475b 219 Gene3D G3DSA:2.60.120.10 108 197 4.4E-25 T 12-10-2018 IPR014710 RmlC-like jelly roll fold M892_14690 3cecf7e1fbc7a4a0677415885277475b 219 Gene3D G3DSA:1.10.10.1320 1 105 4.3E-15 T 12-10-2018 M892_14690 3cecf7e1fbc7a4a0677415885277475b 219 SUPERFAMILY SSF51182 110 203 1.42E-13 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily M892_14690 3cecf7e1fbc7a4a0677415885277475b 219 TIGRFAM TIGR02451 anti_sig_ChrR: anti-sigma factor, putative, ChrR family 3 216 9.2E-73 T 12-10-2018 IPR012807 Anti-sigma factor ChrR, putative M892_15300 a6a5c879f2c976946d91a2c1b2ab3832 137 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 42 109 7.4E-22 T 12-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 M892_15300 a6a5c879f2c976946d91a2c1b2ab3832 137 Pfam PF04347 Flagellar biosynthesis protein, FliO 54 131 6.0E-19 T 12-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 M892_24480 354bcfc31bb6934c0d38382d7bc56c76 161 Pfam PF13187 4Fe-4S dicluster domain 34 79 3.5E-8 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M892_24480 354bcfc31bb6934c0d38382d7bc56c76 161 Pfam PF00037 4Fe-4S binding domain 134 154 1.1E-7 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M892_24480 354bcfc31bb6934c0d38382d7bc56c76 161 Hamap MF_02201 Ferredoxin-type protein NapF [napF]. 23 160 24.021 T 12-10-2018 IPR004496 Ferredoxin-type protein NapF GO:0051539 M892_24480 354bcfc31bb6934c0d38382d7bc56c76 161 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 139 150 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M892_24480 354bcfc31bb6934c0d38382d7bc56c76 161 TIGRFAM TIGR00402 napF: ferredoxin-type protein NapF 17 154 6.8E-42 T 12-10-2018 IPR004496 Ferredoxin-type protein NapF GO:0051539 M892_24480 354bcfc31bb6934c0d38382d7bc56c76 161 Gene3D G3DSA:3.30.70.20 29 82 1.8E-10 T 12-10-2018 M892_24480 354bcfc31bb6934c0d38382d7bc56c76 161 SUPERFAMILY SSF54862 31 158 6.38E-19 T 12-10-2018 M892_24480 354bcfc31bb6934c0d38382d7bc56c76 161 Gene3D G3DSA:3.30.70.20 95 158 1.3E-9 T 12-10-2018 M892_06160 d9e2bb8fd3678572931aafa0a701f0ce 233 Gene3D G3DSA:3.30.420.40 5 202 9.1E-86 T 12-10-2018 M892_06160 d9e2bb8fd3678572931aafa0a701f0ce 233 SUPERFAMILY SSF53067 111 219 1.42E-26 T 12-10-2018 M892_06160 d9e2bb8fd3678572931aafa0a701f0ce 233 Pfam PF00814 Glycoprotease family 30 152 1.1E-32 T 12-10-2018 IPR000905 Gcp-like domain M892_06160 d9e2bb8fd3678572931aafa0a701f0ce 233 SUPERFAMILY SSF53067 4 107 2.29E-32 T 12-10-2018 M892_06160 d9e2bb8fd3678572931aafa0a701f0ce 233 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 5 221 4.9E-69 T 12-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 M892_06160 d9e2bb8fd3678572931aafa0a701f0ce 233 Gene3D G3DSA:3.30.420.40 96 190 9.1E-86 T 12-10-2018 M892_11865 6287ea93c6aa51e2591cdcf838d6c742 169 PIRSF PIRSF034445 1 158 5.4E-21 T 12-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 M892_11865 6287ea93c6aa51e2591cdcf838d6c742 169 Pfam PF07813 LTXXQ motif family protein 38 147 1.6E-23 T 12-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 M892_11865 6287ea93c6aa51e2591cdcf838d6c742 169 Gene3D G3DSA:1.20.120.1490 35 152 1.1E-28 T 12-10-2018 M892_00210 f4b0764fee43eea6a4db8b30666a1470 92 SUPERFAMILY SSF50715 1 92 1.64E-27 T 12-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 M892_00210 f4b0764fee43eea6a4db8b30666a1470 92 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 1 92 9.0E-38 T 12-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 M892_00210 f4b0764fee43eea6a4db8b30666a1470 92 Gene3D G3DSA:2.40.240.10 1 92 2.8E-33 T 12-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 M892_00210 f4b0764fee43eea6a4db8b30666a1470 92 Pfam PF01386 Ribosomal L25p family 4 89 4.8E-22 T 12-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 M892_00210 f4b0764fee43eea6a4db8b30666a1470 92 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 1 92 26.293 T 12-10-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 M892_09495 d56b28f6d4bfd067a9e2788809d87531 387 SUPERFAMILY SSF53756 1 383 2.09E-90 T 12-10-2018 M892_09495 d56b28f6d4bfd067a9e2788809d87531 387 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 23 370 5.2E-86 T 12-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 M892_09495 d56b28f6d4bfd067a9e2788809d87531 387 Gene3D G3DSA:3.40.50.2000 189 356 2.6E-83 T 12-10-2018 M892_09495 d56b28f6d4bfd067a9e2788809d87531 387 Gene3D G3DSA:3.40.50.2000 3 368 2.6E-83 T 12-10-2018 M892_09495 d56b28f6d4bfd067a9e2788809d87531 387 TIGRFAM TIGR03568 NeuC_NnaA: UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing 2 369 1.0E-140 T 12-10-2018 IPR020004 UDP-N-acetylglucosamine 2-epimerase,UDP-hydrolysing GO:0004553|GO:0006047 Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 M892_23240 15cf2c7aa12f99e0f76158b16b902cc7 507 Pfam PF00128 Alpha amylase, catalytic domain 56 387 1.3E-21 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 M892_23240 15cf2c7aa12f99e0f76158b16b902cc7 507 SUPERFAMILY SSF51445 28 393 5.84E-93 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily M892_23240 15cf2c7aa12f99e0f76158b16b902cc7 507 SUPERFAMILY SSF51011 420 504 5.18E-31 T 12-10-2018 M892_23240 15cf2c7aa12f99e0f76158b16b902cc7 507 Gene3D G3DSA:2.40.30.140 127 229 3.2E-154 T 12-10-2018 M892_23240 15cf2c7aa12f99e0f76158b16b902cc7 507 PIRSF PIRSF001021 3 507 1.2E-224 T 12-10-2018 IPR013776 Alpha-amylase, thermostable GO:0004553|GO:0005509|GO:0005975 KEGG: 00500+3.2.1.1 M892_23240 15cf2c7aa12f99e0f76158b16b902cc7 507 Gene3D G3DSA:3.20.20.80 28 392 3.2E-154 T 12-10-2018 M892_23240 15cf2c7aa12f99e0f76158b16b902cc7 507 SMART SM00642 27 417 2.0E-56 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 M892_23240 15cf2c7aa12f99e0f76158b16b902cc7 507 Gene3D G3DSA:2.60.40.1180 423 506 1.4E-26 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta M892_24770 c0a5ec2be9e7246e95ac232ac0be76ca 245 SMART SM00530 10 65 0.0062 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 M892_24770 c0a5ec2be9e7246e95ac232ac0be76ca 245 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 12 68 1.1E-7 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 M892_24770 c0a5ec2be9e7246e95ac232ac0be76ca 245 SUPERFAMILY SSF47413 5 68 1.09E-6 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 M892_13905 09266ced98d789e8c1fcf0804cb66960 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 12-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 M892_13905 09266ced98d789e8c1fcf0804cb66960 112 Gene3D G3DSA:3.30.70.120 1 112 2.0E-46 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal M892_13905 09266ced98d789e8c1fcf0804cb66960 112 SUPERFAMILY SSF54913 1 112 4.77E-45 T 12-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta M892_13905 09266ced98d789e8c1fcf0804cb66960 112 SMART SM00938 4 105 1.9E-68 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 M892_13905 09266ced98d789e8c1fcf0804cb66960 112 PRINTS PR00340 P-II protein signature 83 103 2.0E-40 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 M892_13905 09266ced98d789e8c1fcf0804cb66960 112 PRINTS PR00340 P-II protein signature 23 41 2.0E-40 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 M892_13905 09266ced98d789e8c1fcf0804cb66960 112 PRINTS PR00340 P-II protein signature 52 75 2.0E-40 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 M892_13905 09266ced98d789e8c1fcf0804cb66960 112 PRINTS PR00340 P-II protein signature 2 17 2.0E-40 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 M892_13905 09266ced98d789e8c1fcf0804cb66960 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 12-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 M892_13905 09266ced98d789e8c1fcf0804cb66960 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.3E-43 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 M892_13905 09266ced98d789e8c1fcf0804cb66960 112 PIRSF PIRSF039144 1 112 6.4E-56 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 M892_08470 eac050978016b50b4d91267074c7d15b 196 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 5 40 1.6E-14 T 12-10-2018 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 M892_08470 eac050978016b50b4d91267074c7d15b 196 Pfam PF00355 Rieske [2Fe-2S] domain 55 174 6.7E-12 T 12-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 M892_08470 eac050978016b50b4d91267074c7d15b 196 Gene3D G3DSA:1.20.5.510 1 40 1.4E-5 T 12-10-2018 M892_08470 eac050978016b50b4d91267074c7d15b 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 162 174 3.0E-7 T 12-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 M892_08470 eac050978016b50b4d91267074c7d15b 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 149 161 3.0E-7 T 12-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 M892_08470 eac050978016b50b4d91267074c7d15b 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 119 130 3.0E-7 T 12-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 M892_08470 eac050978016b50b4d91267074c7d15b 196 Gene3D G3DSA:2.102.10.10 43 190 1.3E-47 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 M892_08470 eac050978016b50b4d91267074c7d15b 196 SUPERFAMILY SSF50022 30 189 1.89E-44 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 M892_08470 eac050978016b50b4d91267074c7d15b 196 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 9 190 1.6E-74 T 12-10-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 M892_04265 8bbc51d05d1aeadc97e4669fb17bf156 378 PIRSF PIRSF034888 1 375 9.4E-71 T 12-10-2018 IPR014592 Predicted P-loop ATP-binding protein, VCA0200 M892_04265 8bbc51d05d1aeadc97e4669fb17bf156 378 Pfam PF12476 Protein of unknown function (DUF3696) 327 366 1.8E-8 T 12-10-2018 IPR022532 Domain of unknown function DUF3696, C-terminal M892_04265 8bbc51d05d1aeadc97e4669fb17bf156 378 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 23 309 2.1E-20 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 M892_04265 8bbc51d05d1aeadc97e4669fb17bf156 378 Gene3D G3DSA:3.40.50.300 2 338 6.1E-19 T 12-10-2018 M892_04265 8bbc51d05d1aeadc97e4669fb17bf156 378 SUPERFAMILY SSF52540 1 312 2.54E-16 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_20235 60270fdc32cd610c2b3f8baf36c0ff17 250 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 39 57 1.1E-9 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 M892_20235 60270fdc32cd610c2b3f8baf36c0ff17 250 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 25 39 1.1E-9 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 M892_20235 60270fdc32cd610c2b3f8baf36c0ff17 250 SMART SM01134 73 250 6.1E-41 T 12-10-2018 M892_20235 60270fdc32cd610c2b3f8baf36c0ff17 250 Pfam PF08220 DeoR-like helix-turn-helix domain 7 59 2.0E-19 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 M892_20235 60270fdc32cd610c2b3f8baf36c0ff17 250 Pfam PF00455 DeoR C terminal sensor domain 75 179 3.2E-27 T 12-10-2018 IPR014036 DeoR C-terminal sensor domain M892_20235 60270fdc32cd610c2b3f8baf36c0ff17 250 SUPERFAMILY SSF100950 74 248 3.16E-20 T 12-10-2018 IPR037171 NagB/RpiA transferase-like M892_20235 60270fdc32cd610c2b3f8baf36c0ff17 250 SMART SM00420 7 59 9.1E-20 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 M892_20235 60270fdc32cd610c2b3f8baf36c0ff17 250 ProSitePatterns PS00894 DeoR-type HTH domain signature. 7 41 - T 12-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 M892_20235 60270fdc32cd610c2b3f8baf36c0ff17 250 Gene3D G3DSA:3.30.750.70 70 135 3.7E-7 T 12-10-2018 M892_20235 60270fdc32cd610c2b3f8baf36c0ff17 250 SUPERFAMILY SSF46785 4 78 9.56E-14 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_20235 60270fdc32cd610c2b3f8baf36c0ff17 250 Gene3D G3DSA:1.10.10.10 1 56 1.3E-10 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_12145 80efae1066337e81a75c3fd4b2b62701 429 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 361 1.7E-156 T 12-10-2018 IPR016496 GTPase HflX GO:0005525 M892_12145 80efae1066337e81a75c3fd4b2b62701 429 Pfam PF13167 GTP-binding GTPase N-terminal 25 112 8.7E-31 T 12-10-2018 IPR025121 GTPase HflX, N-terminal M892_12145 80efae1066337e81a75c3fd4b2b62701 429 SUPERFAMILY SSF54980 364 427 1.87E-17 T 12-10-2018 IPR035647 EF-G domain III/V-like M892_12145 80efae1066337e81a75c3fd4b2b62701 429 SUPERFAMILY SSF52540 197 372 1.01E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_12145 80efae1066337e81a75c3fd4b2b62701 429 Hamap MF_00900 GTPase HflX [hflX]. 27 390 48.245 T 12-10-2018 IPR016496 GTPase HflX GO:0005525 M892_12145 80efae1066337e81a75c3fd4b2b62701 429 Pfam PF01926 50S ribosome-binding GTPase 200 318 2.1E-21 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 M892_12145 80efae1066337e81a75c3fd4b2b62701 429 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 1.1E-28 T 12-10-2018 IPR032305 GTP-binding protein, middle domain M892_12145 80efae1066337e81a75c3fd4b2b62701 429 Gene3D G3DSA:3.40.50.11060 18 138 6.1E-37 T 12-10-2018 M892_12145 80efae1066337e81a75c3fd4b2b62701 429 Gene3D G3DSA:3.40.50.300 197 371 2.9E-43 T 12-10-2018 M892_12145 80efae1066337e81a75c3fd4b2b62701 429 PIRSF PIRSF006809 3 422 9.7E-152 T 12-10-2018 IPR016496 GTPase HflX GO:0005525 M892_12145 80efae1066337e81a75c3fd4b2b62701 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 3.9E-10 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 M892_12145 80efae1066337e81a75c3fd4b2b62701 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 3.9E-10 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 M892_12145 80efae1066337e81a75c3fd4b2b62701 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 3.9E-10 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 M892_14805 edbfae3c64ef6a9cd2ac818e038810fa 63 Pfam PF14056 Domain of unknown function (DUF4250) 9 62 2.5E-20 T 12-10-2018 IPR025346 Protein of unknown function DUF4250 M892_26595 4789e0f7ae71c14030cb416953082fc0 399 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 381 2.0E-93 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G M892_26595 4789e0f7ae71c14030cb416953082fc0 399 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 320 397 2.4E-17 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain M892_26595 4789e0f7ae71c14030cb416953082fc0 399 Gene3D G3DSA:2.60.98.20 144 281 5.2E-35 T 12-10-2018 IPR037058 Flagellar hook protein FlgE superfamily M892_26595 4789e0f7ae71c14030cb416953082fc0 399 Pfam PF07559 Flagellar basal body protein FlaE 173 280 5.3E-24 T 12-10-2018 IPR011491 Flagellar hook protein FlgE M892_26595 4789e0f7ae71c14030cb416953082fc0 399 Pfam PF00460 Flagella basal body rod protein 3 33 3.0E-9 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 M892_26595 4789e0f7ae71c14030cb416953082fc0 399 SUPERFAMILY SSF117143 73 360 7.59E-80 T 12-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like M892_15500 e64a61932d7044ecd3ed6eaccdf3934c 177 Pfam PF04315 Elongation factor P hydroxylase 12 173 7.4E-74 T 12-10-2018 IPR007411 Elongation factor P hydroxylase M892_14045 8b64820443e6eb27104a5f63f81ed6e3 337 Pfam PF13609 Gram-negative porin 10 301 2.6E-25 T 12-10-2018 M892_14045 8b64820443e6eb27104a5f63f81ed6e3 337 SUPERFAMILY SSF56935 22 337 1.83E-51 T 12-10-2018 M892_14045 8b64820443e6eb27104a5f63f81ed6e3 337 Gene3D G3DSA:2.40.160.10 22 337 2.3E-60 T 12-10-2018 IPR023614 Porin domain superfamily M892_00795 9099aba77f0d169c452955ea0f77f6ea 401 Pfam PF03222 Tryptophan/tyrosine permease family 4 382 9.4E-110 T 12-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 M892_00795 9099aba77f0d169c452955ea0f77f6ea 401 PRINTS PR00166 Aromatic amino acid permease signature 222 241 2.2E-79 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 M892_00795 9099aba77f0d169c452955ea0f77f6ea 401 PRINTS PR00166 Aromatic amino acid permease signature 313 331 2.2E-79 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 M892_00795 9099aba77f0d169c452955ea0f77f6ea 401 PRINTS PR00166 Aromatic amino acid permease signature 334 353 2.2E-79 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 M892_00795 9099aba77f0d169c452955ea0f77f6ea 401 PRINTS PR00166 Aromatic amino acid permease signature 38 57 2.2E-79 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 M892_00795 9099aba77f0d169c452955ea0f77f6ea 401 PRINTS PR00166 Aromatic amino acid permease signature 183 205 2.2E-79 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 M892_00795 9099aba77f0d169c452955ea0f77f6ea 401 PRINTS PR00166 Aromatic amino acid permease signature 149 169 2.2E-79 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 M892_00795 9099aba77f0d169c452955ea0f77f6ea 401 PRINTS PR00166 Aromatic amino acid permease signature 11 34 2.2E-79 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 M892_00795 9099aba77f0d169c452955ea0f77f6ea 401 PRINTS PR00166 Aromatic amino acid permease signature 279 298 2.2E-79 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 M892_00795 9099aba77f0d169c452955ea0f77f6ea 401 PRINTS PR00166 Aromatic amino acid permease signature 83 103 2.2E-79 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 M892_00795 9099aba77f0d169c452955ea0f77f6ea 401 Gene3D G3DSA:1.20.1740.10 3 399 9.2E-9 T 12-10-2018 M892_00795 9099aba77f0d169c452955ea0f77f6ea 401 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 8 377 7.5E-111 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 M892_00795 9099aba77f0d169c452955ea0f77f6ea 401 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 18 34 - T 12-10-2018 IPR013061 Tryptophan/tryrosine permease, conserved site M892_19115 bf2f041b506daf39ac47fd3aca202bb9 146 SUPERFAMILY SSF52788 1 146 1.57E-38 T 12-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily M892_19115 bf2f041b506daf39ac47fd3aca202bb9 146 SMART SM00226 3 145 1.0E-50 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I M892_19115 bf2f041b506daf39ac47fd3aca202bb9 146 Gene3D G3DSA:3.40.50.2300 1 146 5.8E-48 T 12-10-2018 M892_19115 bf2f041b506daf39ac47fd3aca202bb9 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 5 22 1.1E-23 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 M892_19115 bf2f041b506daf39ac47fd3aca202bb9 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 45 61 1.1E-23 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 M892_19115 bf2f041b506daf39ac47fd3aca202bb9 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 79 94 1.1E-23 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 M892_19115 bf2f041b506daf39ac47fd3aca202bb9 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 101 114 1.1E-23 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 M892_19115 bf2f041b506daf39ac47fd3aca202bb9 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 117 132 1.1E-23 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 M892_19115 bf2f041b506daf39ac47fd3aca202bb9 146 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 5 142 5.2E-36 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I M892_13705 060c1a0f5db481e58834e5a41da89739 117 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 1.7E-52 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_13705 060c1a0f5db481e58834e5a41da89739 117 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 12-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_13705 060c1a0f5db481e58834e5a41da89739 117 Pfam PF01245 Ribosomal protein L19 3 113 7.1E-51 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_13705 060c1a0f5db481e58834e5a41da89739 117 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 31.52 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_13705 060c1a0f5db481e58834e5a41da89739 117 PIRSF PIRSF002191 1 117 1.1E-51 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_13705 060c1a0f5db481e58834e5a41da89739 117 SUPERFAMILY SSF50104 2 115 5.31E-48 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily M892_13705 060c1a0f5db481e58834e5a41da89739 117 Gene3D G3DSA:2.30.30.790 3 117 1.6E-17 T 12-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_13705 060c1a0f5db481e58834e5a41da89739 117 PRINTS PR00061 Ribosomal protein L19 signature 88 113 1.6E-41 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_13705 060c1a0f5db481e58834e5a41da89739 117 PRINTS PR00061 Ribosomal protein L19 signature 34 63 1.6E-41 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_13705 060c1a0f5db481e58834e5a41da89739 117 PRINTS PR00061 Ribosomal protein L19 signature 4 33 1.6E-41 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_04620 886ecb92c20ed1d24b681aae3b153aca 243 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 72 85 1.5E-29 T 12-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 M892_04620 886ecb92c20ed1d24b681aae3b153aca 243 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 92 107 1.5E-29 T 12-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 M892_04620 886ecb92c20ed1d24b681aae3b153aca 243 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 161 173 1.5E-29 T 12-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 M892_04620 886ecb92c20ed1d24b681aae3b153aca 243 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 112 125 1.5E-29 T 12-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 M892_04620 886ecb92c20ed1d24b681aae3b153aca 243 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 20 30 1.5E-29 T 12-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 M892_04620 886ecb92c20ed1d24b681aae3b153aca 243 Pfam PF01514 Secretory protein of YscJ/FliF family 7 183 3.7E-23 T 12-10-2018 IPR006182 Secretory protein YscJ/FliF M892_04620 886ecb92c20ed1d24b681aae3b153aca 243 Gene3D G3DSA:3.30.300.30 88 196 4.3E-40 T 12-10-2018 M892_04620 886ecb92c20ed1d24b681aae3b153aca 243 TIGRFAM TIGR02544 III_secr_YscJ: type III secretion apparatus lipoprotein, YscJ/HrcJ family 3 189 8.8E-70 T 12-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 M892_04620 886ecb92c20ed1d24b681aae3b153aca 243 Gene3D G3DSA:3.30.70.1530 15 86 6.0E-25 T 12-10-2018 M892_09000 6b827f5dfdfba74a524ef4e5f260b52f 242 Pfam PF00005 ABC transporter 30 185 2.8E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_09000 6b827f5dfdfba74a524ef4e5f260b52f 242 SUPERFAMILY SSF52540 31 228 1.18E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_09000 6b827f5dfdfba74a524ef4e5f260b52f 242 Gene3D G3DSA:3.40.50.300 7 235 5.0E-53 T 12-10-2018 M892_09000 6b827f5dfdfba74a524ef4e5f260b52f 242 SMART SM00382 35 233 2.4E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_05480 a35974badbfcdfbc79689cd32fe46f27 242 Pfam PF10972 Peptidoglycan-binding protein, CsiV 2 241 7.9E-62 T 12-10-2018 IPR021241 Peptidoglycan-binding protein, CsiV M892_24980 8d491bba0c5a77c14a7330fb6795a329 186 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 6 157 3.4E-22 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 M892_24980 8d491bba0c5a77c14a7330fb6795a329 186 SUPERFAMILY SSF88946 6 91 1.02E-18 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 M892_24980 8d491bba0c5a77c14a7330fb6795a329 186 Pfam PF08281 Sigma-70, region 4 109 155 2.1E-9 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 M892_24980 8d491bba0c5a77c14a7330fb6795a329 186 SUPERFAMILY SSF88659 98 160 2.62E-10 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like M892_24980 8d491bba0c5a77c14a7330fb6795a329 186 Pfam PF04542 Sigma-70 region 2 11 76 3.6E-13 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 M892_24980 8d491bba0c5a77c14a7330fb6795a329 186 TIGRFAM TIGR02959 SigZ: RNA polymerase sigma factor, SigZ family 10 179 1.4E-57 T 12-10-2018 IPR014304 RNA polymerase sigma-Z type M892_24980 8d491bba0c5a77c14a7330fb6795a329 186 Gene3D G3DSA:1.10.10.10 76 162 9.4E-11 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_24980 8d491bba0c5a77c14a7330fb6795a329 186 Gene3D G3DSA:1.10.1740.10 1 75 2.3E-16 T 12-10-2018 M892_10445 7b8cbae7a1dff0d8de3d7c4d18ce6eb9 485 PIRSF PIRSF006247 1 485 1.6E-177 T 12-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 M892_10445 7b8cbae7a1dff0d8de3d7c4d18ce6eb9 485 Pfam PF02386 Cation transport protein 39 477 3.9E-89 T 12-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 M892_10445 7b8cbae7a1dff0d8de3d7c4d18ce6eb9 485 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 85 468 3.1E-117 T 12-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 M892_25635 e791b345df9e441607ca3921f06e4cb2 308 Pfam PF01476 LysM domain 48 91 2.8E-8 T 12-10-2018 IPR018392 LysM domain M892_25635 e791b345df9e441607ca3921f06e4cb2 308 Gene3D G3DSA:2.40.440.10 27 306 2.9E-86 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like M892_25635 e791b345df9e441607ca3921f06e4cb2 308 SUPERFAMILY SSF141523 100 238 6.15E-30 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like M892_25635 e791b345df9e441607ca3921f06e4cb2 308 SUPERFAMILY SSF54106 47 91 2.88E-7 T 12-10-2018 M892_25635 e791b345df9e441607ca3921f06e4cb2 308 Pfam PF03734 L,D-transpeptidase catalytic domain 103 238 1.8E-22 T 12-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 M892_25635 e791b345df9e441607ca3921f06e4cb2 308 SMART SM00257 47 91 5.0E-5 T 12-10-2018 IPR018392 LysM domain M892_02780 96203bbe085dba0375b14892e5d76960 395 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 1 300 3.2E-90 T 12-10-2018 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase M892_02780 96203bbe085dba0375b14892e5d76960 395 TIGRFAM TIGR04439 histamin_N_OH: putative histamine N-monooxygenase 1 390 2.1E-216 T 12-10-2018 IPR031043 Putative histamine N-monooxygenase M892_02780 96203bbe085dba0375b14892e5d76960 395 Gene3D G3DSA:3.50.50.60 1 387 1.2E-91 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_02780 96203bbe085dba0375b14892e5d76960 395 SUPERFAMILY SSF51905 33 227 1.76E-10 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_02780 96203bbe085dba0375b14892e5d76960 395 SUPERFAMILY SSF51905 228 324 1.66E-5 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_00250 7c45b9a75a38dfae6bea02d39085e0d0 400 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 13 395 1.2E-117 T 12-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 M892_00250 7c45b9a75a38dfae6bea02d39085e0d0 400 Gene3D G3DSA:1.20.1720.10 17 396 3.0E-100 T 12-10-2018 M892_00250 7c45b9a75a38dfae6bea02d39085e0d0 400 Pfam PF07690 Major Facilitator Superfamily 24 363 4.6E-50 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 M892_00250 7c45b9a75a38dfae6bea02d39085e0d0 400 SUPERFAMILY SSF103473 8 398 4.05E-65 T 12-10-2018 IPR036259 MFS transporter superfamily M892_17265 ca732a361a8ad581433c39d2d86770fa 177 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 42 169 3.5E-39 T 12-10-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 M892_17265 ca732a361a8ad581433c39d2d86770fa 177 Pfam PF08534 Redoxin 43 158 5.7E-12 T 12-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 M892_17265 ca732a361a8ad581433c39d2d86770fa 177 SUPERFAMILY SSF52833 44 172 1.09E-29 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M892_17265 ca732a361a8ad581433c39d2d86770fa 177 Gene3D G3DSA:3.40.30.10 30 174 2.4E-29 T 12-10-2018 M892_07640 4e3eb4066bb435ca6d4ae03de5153014 168 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 12-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site M892_07640 4e3eb4066bb435ca6d4ae03de5153014 168 Hamap MF_01176 HTH-type transcriptional regulator IscR [iscR]. 1 168 51.603 T 12-10-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 M892_07640 4e3eb4066bb435ca6d4ae03de5153014 168 Gene3D G3DSA:1.10.10.10 1 144 1.2E-54 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_07640 4e3eb4066bb435ca6d4ae03de5153014 168 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 134 2.8E-66 T 12-10-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 M892_07640 4e3eb4066bb435ca6d4ae03de5153014 168 SUPERFAMILY SSF46785 2 133 9.47E-36 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_07640 4e3eb4066bb435ca6d4ae03de5153014 168 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 131 2.3E-47 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type M892_07640 4e3eb4066bb435ca6d4ae03de5153014 168 Pfam PF02082 Transcriptional regulator 1 83 9.6E-28 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type M892_04440 9b187f5cdedb17fa3dcbb8664e141feb 241 SUPERFAMILY SSF56317 4 230 3.53E-28 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily M892_04440 9b187f5cdedb17fa3dcbb8664e141feb 241 Pfam PF00795 Carbon-nitrogen hydrolase 3 232 1.7E-10 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 M892_04440 9b187f5cdedb17fa3dcbb8664e141feb 241 Gene3D G3DSA:3.60.110.10 3 238 1.2E-25 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily M892_16440 9c9be381bef1a0070f2f2c9223e2f44a 338 Pfam PF02618 YceG-like family 43 328 1.5E-81 T 12-10-2018 IPR003770 Endolytic murein transglycosylase M892_16440 9c9be381bef1a0070f2f2c9223e2f44a 338 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 6 336 5.4E-100 T 12-10-2018 IPR003770 Endolytic murein transglycosylase M892_16440 9c9be381bef1a0070f2f2c9223e2f44a 338 Gene3D G3DSA:3.30.160.60 73 110 2.7E-6 T 12-10-2018 M892_16440 9c9be381bef1a0070f2f2c9223e2f44a 338 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 5 336 33.027 T 12-10-2018 IPR003770 Endolytic murein transglycosylase M892_16440 9c9be381bef1a0070f2f2c9223e2f44a 338 Gene3D G3DSA:3.30.160.60 302 338 7.6E-18 T 12-10-2018 M892_16860 3cda6f3ca9d0aa8493b2870e0629ba02 227 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 1.7E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_16860 3cda6f3ca9d0aa8493b2870e0629ba02 227 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 1.7E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_16860 3cda6f3ca9d0aa8493b2870e0629ba02 227 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 1.7E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_16860 3cda6f3ca9d0aa8493b2870e0629ba02 227 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 1.7E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_16860 3cda6f3ca9d0aa8493b2870e0629ba02 227 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 1.7E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_16860 3cda6f3ca9d0aa8493b2870e0629ba02 227 SUPERFAMILY SSF51735 1 227 9.93E-68 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_16860 3cda6f3ca9d0aa8493b2870e0629ba02 227 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 3.3E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_16860 3cda6f3ca9d0aa8493b2870e0629ba02 227 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 168 3.3E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_16860 3cda6f3ca9d0aa8493b2870e0629ba02 227 Gene3D G3DSA:3.40.50.720 1 227 3.0E-63 T 12-10-2018 M892_16860 3cda6f3ca9d0aa8493b2870e0629ba02 227 Pfam PF00106 short chain dehydrogenase 3 189 4.9E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_18230 441329131854f4a85f7106e1d727a247 421 Gene3D G3DSA:3.40.50.720 9 127 6.2E-5 T 12-10-2018 M892_14945 674567e9b73dcde273b01d163500283d 150 Gene3D G3DSA:3.10.129.10 2 150 1.8E-61 T 12-10-2018 M892_14945 674567e9b73dcde273b01d163500283d 150 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 8 146 5.5E-60 T 12-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 M892_14945 674567e9b73dcde273b01d163500283d 150 SUPERFAMILY SSF54637 7 146 2.76E-49 T 12-10-2018 IPR029069 HotDog domain superfamily M892_14945 674567e9b73dcde273b01d163500283d 150 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 8 149 36.708 T 12-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 M892_14945 674567e9b73dcde273b01d163500283d 150 Pfam PF07977 FabA-like domain 17 141 4.7E-40 T 12-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 M892_10380 cbd7715bbae8362ea665057397c9b6da 368 Gene3D G3DSA:2.40.30.170 58 279 1.6E-72 T 12-10-2018 M892_10380 cbd7715bbae8362ea665057397c9b6da 368 SUPERFAMILY SSF111369 58 273 5.62E-42 T 12-10-2018 M892_10380 cbd7715bbae8362ea665057397c9b6da 368 Gene3D G3DSA:1.10.287.470 103 162 1.6E-72 T 12-10-2018 M892_10380 cbd7715bbae8362ea665057397c9b6da 368 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 61 269 1.6E-27 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain M892_10380 cbd7715bbae8362ea665057397c9b6da 368 Gene3D G3DSA:2.40.420.20 280 351 1.6E-72 T 12-10-2018 M892_10380 cbd7715bbae8362ea665057397c9b6da 368 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 353 1.9E-73 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 M892_10380 cbd7715bbae8362ea665057397c9b6da 368 Gene3D G3DSA:2.40.50.100 68 196 1.6E-72 T 12-10-2018 M892_12665 a71fb4bc1a96a7e5892024847bbb2858 594 Pfam PF15864 Protein glycosylation ligase 174 199 9.2E-11 T 12-10-2018 IPR031726 Protein glycosylation ligase domain M892_12665 a71fb4bc1a96a7e5892024847bbb2858 594 Pfam PF11846 Virulence factor membrane-bound polymerase, C-terminal 390 579 1.5E-65 T 12-10-2018 IPR021797 Virulence factor membrane-bound polymerase, C-terminal M892_12665 a71fb4bc1a96a7e5892024847bbb2858 594 Pfam PF04932 O-Antigen ligase 221 368 2.0E-15 T 12-10-2018 IPR007016 O-antigen ligase-related M892_23000 242d1559ed8caa5031a998dca353b62e 323 Pfam PF00990 Diguanylate cyclase, GGDEF domain 155 316 2.7E-44 T 12-10-2018 IPR000160 GGDEF domain M892_23000 242d1559ed8caa5031a998dca353b62e 323 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 151 319 1.7E-46 T 12-10-2018 IPR000160 GGDEF domain M892_23000 242d1559ed8caa5031a998dca353b62e 323 Gene3D G3DSA:3.40.50.2300 2 144 1.0E-33 T 12-10-2018 M892_23000 242d1559ed8caa5031a998dca353b62e 323 SUPERFAMILY SSF55073 160 321 4.39E-45 T 12-10-2018 IPR029787 Nucleotide cyclase M892_23000 242d1559ed8caa5031a998dca353b62e 323 SUPERFAMILY SSF52172 10 159 3.84E-37 T 12-10-2018 IPR011006 CheY-like superfamily M892_23000 242d1559ed8caa5031a998dca353b62e 323 SMART SM00448 12 124 9.0E-33 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_23000 242d1559ed8caa5031a998dca353b62e 323 SMART SM00267 144 320 1.1E-53 T 12-10-2018 IPR000160 GGDEF domain M892_23000 242d1559ed8caa5031a998dca353b62e 323 Pfam PF00072 Response regulator receiver domain 14 121 1.0E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_23000 242d1559ed8caa5031a998dca353b62e 323 Gene3D G3DSA:3.30.70.270 145 322 5.8E-53 T 12-10-2018 M892_05775 62947b4ecb055fbc43be7d7e880687f8 208 Pfam PF08722 TnsA endonuclease N terminal 45 120 2.0E-15 T 12-10-2018 IPR014833 TnsA endonuclease, N-terminal M892_20415 0f4dcb6af6b54f08ca7d7fd8c1f7f437 506 Pfam PF00474 Sodium:solute symporter family 34 416 2.9E-44 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 M892_20415 0f4dcb6af6b54f08ca7d7fd8c1f7f437 506 Gene3D G3DSA:1.20.1730.10 6 484 2.4E-72 T 12-10-2018 IPR038377 Sodium/glucose symporter superfamily M892_01515 9bbe0bc0e84539c0d9c110c812bd54a5 814 Gene3D G3DSA:2.60.40.10 337 431 9.5E-6 T 12-10-2018 IPR013783 Immunoglobulin-like fold M892_07720 c7318b74b86675f798166bff5a0b84fd 256 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 3 230 1.1E-117 T 12-10-2018 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 KEGG: 00190+2.7.4.1 M892_07720 c7318b74b86675f798166bff5a0b84fd 256 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 3 230 5.7E-116 T 12-10-2018 IPR022488 Polyphosphate kinase-2-related M892_07720 c7318b74b86675f798166bff5a0b84fd 256 PIRSF PIRSF028756 1 256 2.9E-133 T 12-10-2018 IPR016898 Polyphosphate kinase 2 KEGG: 00190+2.7.4.1 M892_07720 c7318b74b86675f798166bff5a0b84fd 256 Gene3D G3DSA:3.40.50.300 1 242 1.1E-102 T 12-10-2018 M892_07720 c7318b74b86675f798166bff5a0b84fd 256 SUPERFAMILY SSF52540 35 223 1.91E-31 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_21725 4c8c5f4eaa79b9ced31648a8f5e93062 137 SUPERFAMILY SSF55811 4 124 4.06E-32 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 M892_21725 4c8c5f4eaa79b9ced31648a8f5e93062 137 Gene3D G3DSA:3.90.79.10 1 136 7.5E-45 T 12-10-2018 M892_21725 4c8c5f4eaa79b9ced31648a8f5e93062 137 PRINTS PR00502 NUDIX hydrolase family signature 33 47 2.0E-7 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 M892_21725 4c8c5f4eaa79b9ced31648a8f5e93062 137 PRINTS PR00502 NUDIX hydrolase family signature 47 62 2.0E-7 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 M892_21725 4c8c5f4eaa79b9ced31648a8f5e93062 137 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 M892_21725 4c8c5f4eaa79b9ced31648a8f5e93062 137 Pfam PF00293 NUDIX domain 5 118 1.1E-23 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 M892_10185 cec678a9acc07fc1003301a3028f6973 279 Gene3D G3DSA:3.40.50.150 1 279 3.1E-114 T 12-10-2018 M892_10185 cec678a9acc07fc1003301a3028f6973 279 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 277 2.2E-115 T 12-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 M892_10185 cec678a9acc07fc1003301a3028f6973 279 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 266 41.151 T 12-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 M892_10185 cec678a9acc07fc1003301a3028f6973 279 SUPERFAMILY SSF53335 9 273 8.84E-96 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M892_02790 653797996734931d90994ad46057ee85 386 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 110 315 4.2E-23 T 12-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 M892_02790 653797996734931d90994ad46057ee85 386 SUPERFAMILY SSF53383 20 369 3.59E-76 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M892_02790 653797996734931d90994ad46057ee85 386 ProSitePatterns PS00392 DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 226 247 - T 12-10-2018 IPR021115 Pyridoxal-phosphate binding site GO:0016831 M892_02790 653797996734931d90994ad46057ee85 386 Hamap MF_00609 Histidine decarboxylase [hdc]. 2 374 70.209 T 12-10-2018 IPR023523 Histidine decarboxylase, bacteria GO:0004398|GO:0030170 KEGG: 00340+4.1.1.22|MetaCyc: PWY-6173 M892_02790 653797996734931d90994ad46057ee85 386 Gene3D G3DSA:3.40.640.10 40 312 1.1E-52 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M892_27095 2f1fce44ede6a939444a2757d5c82cf4 266 Gene3D G3DSA:1.10.443.10 9 253 1.7E-22 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 M892_27095 2f1fce44ede6a939444a2757d5c82cf4 266 SUPERFAMILY SSF56349 20 255 1.79E-22 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 M892_27095 2f1fce44ede6a939444a2757d5c82cf4 266 Pfam PF00589 Phage integrase family 26 247 1.4E-15 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 M892_03850 ffbfd931b82678ef97df83e5f868f430 260 Gene3D G3DSA:3.40.50.300 1 259 3.7E-69 T 12-10-2018 M892_03850 ffbfd931b82678ef97df83e5f868f430 260 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_03850 ffbfd931b82678ef97df83e5f868f430 260 Pfam PF00005 ABC transporter 30 178 5.2E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_03850 ffbfd931b82678ef97df83e5f868f430 260 SMART SM00382 38 227 4.3E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_03850 ffbfd931b82678ef97df83e5f868f430 260 SUPERFAMILY SSF52540 3 252 5.9E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_26240 a82e8a4f210afed8d50dbe8b73a9236f 63 Gene3D G3DSA:3.10.180.10 6 63 1.9E-12 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M892_26240 a82e8a4f210afed8d50dbe8b73a9236f 63 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 61 1.1E-8 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain M892_26240 a82e8a4f210afed8d50dbe8b73a9236f 63 SUPERFAMILY SSF54593 1 61 3.85E-14 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M892_25785 499e740dabe53102fc570a89844b0a38 183 Gene3D G3DSA:3.20.20.70 3 183 1.5E-58 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M892_25785 499e740dabe53102fc570a89844b0a38 183 SUPERFAMILY SSF51395 6 179 1.57E-46 T 12-10-2018 M892_25785 499e740dabe53102fc570a89844b0a38 183 Pfam PF01070 FMN-dependent dehydrogenase 13 177 2.7E-54 T 12-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 M892_24700 021601708f0224c6c9fce18a01456568 280 Pfam PF00486 Transcriptional regulatory protein, C terminal 202 277 9.9E-16 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M892_24700 021601708f0224c6c9fce18a01456568 280 Gene3D G3DSA:3.40.50.2300 50 169 4.2E-32 T 12-10-2018 M892_24700 021601708f0224c6c9fce18a01456568 280 SUPERFAMILY SSF46894 190 278 7.94E-19 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M892_24700 021601708f0224c6c9fce18a01456568 280 SMART SM00448 54 164 1.6E-35 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_24700 021601708f0224c6c9fce18a01456568 280 SUPERFAMILY SSF52172 50 177 6.97E-37 T 12-10-2018 IPR011006 CheY-like superfamily M892_24700 021601708f0224c6c9fce18a01456568 280 SMART SM00862 201 277 6.4E-15 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M892_24700 021601708f0224c6c9fce18a01456568 280 Pfam PF00072 Response regulator receiver domain 56 164 2.0E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_24700 021601708f0224c6c9fce18a01456568 280 Gene3D G3DSA:1.10.10.10 170 280 1.4E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_23875 50f9901eb534424a832f8ca70eae69fc 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 6 112 5.4E-15 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 M892_23875 50f9901eb534424a832f8ca70eae69fc 222 Gene3D G3DSA:1.10.3720.10 3 217 6.7E-41 T 12-10-2018 IPR035906 MetI-like superfamily M892_23875 50f9901eb534424a832f8ca70eae69fc 222 SUPERFAMILY SSF161098 9 202 3.79E-31 T 12-10-2018 IPR035906 MetI-like superfamily M892_23875 50f9901eb534424a832f8ca70eae69fc 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 215 1.0E-13 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M892_00275 bbbe5904924cddf4e81ec1010cacd7e2 223 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_00275 bbbe5904924cddf4e81ec1010cacd7e2 223 SMART SM00382 30 218 2.5E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_00275 bbbe5904924cddf4e81ec1010cacd7e2 223 SUPERFAMILY SSF52540 1 217 9.8E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_00275 bbbe5904924cddf4e81ec1010cacd7e2 223 Pfam PF00005 ABC transporter 21 167 1.7E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_00275 bbbe5904924cddf4e81ec1010cacd7e2 223 Gene3D G3DSA:3.40.50.300 1 223 1.4E-57 T 12-10-2018 M892_16280 d112473da30f2d76eebc9ed63d4daa6b 264 Pfam PF00005 ABC transporter 22 177 3.9E-24 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_16280 d112473da30f2d76eebc9ed63d4daa6b 264 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_16280 d112473da30f2d76eebc9ed63d4daa6b 264 SMART SM00382 31 226 2.0E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_16280 d112473da30f2d76eebc9ed63d4daa6b 264 SUPERFAMILY SSF52540 2 231 4.72E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_16280 d112473da30f2d76eebc9ed63d4daa6b 264 Gene3D G3DSA:3.40.50.300 1 255 7.6E-53 T 12-10-2018 M892_18765 fa9cfb062b51a5c7b321c2075b427d7d 276 Pfam PF10670 Domain of unknown function (DUF4198) 24 251 7.7E-47 T 12-10-2018 IPR019613 Protein of unknown function DUF4198 M892_20620 f3494fbad42ba8afe37ce3de2a08e745 396 Pfam PF07690 Major Facilitator Superfamily 17 349 3.4E-45 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 M892_20620 f3494fbad42ba8afe37ce3de2a08e745 396 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 6 378 4.2E-60 T 12-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 M892_20620 f3494fbad42ba8afe37ce3de2a08e745 396 SUPERFAMILY SSF103473 4 383 1.03E-56 T 12-10-2018 IPR036259 MFS transporter superfamily M892_20620 f3494fbad42ba8afe37ce3de2a08e745 396 Gene3D G3DSA:1.20.1720.10 6 380 3.2E-85 T 12-10-2018 M892_22705 f0949eff470a6de5b227ac8983d19346 477 Pfam PF01266 FAD dependent oxidoreductase 12 372 5.9E-10 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 M892_22705 f0949eff470a6de5b227ac8983d19346 477 Gene3D G3DSA:3.50.50.60 7 96 5.2E-8 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_22705 f0949eff470a6de5b227ac8983d19346 477 SUPERFAMILY SSF51905 9 298 1.43E-19 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_22705 f0949eff470a6de5b227ac8983d19346 477 SUPERFAMILY SSF51735 11 131 1.12E-6 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_07505 e5cb6aa67512d772496d1ab1689085af 515 Pfam PF01235 Sodium:alanine symporter family 51 471 1.3E-148 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 M892_07505 e5cb6aa67512d772496d1ab1689085af 515 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 462 4.1E-135 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 M892_07505 e5cb6aa67512d772496d1ab1689085af 515 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 86 101 - T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 M892_07505 e5cb6aa67512d772496d1ab1689085af 515 PRINTS PR00175 Sodium/alanine symporter signature 304 322 4.5E-57 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 M892_07505 e5cb6aa67512d772496d1ab1689085af 515 PRINTS PR00175 Sodium/alanine symporter signature 217 236 4.5E-57 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 M892_07505 e5cb6aa67512d772496d1ab1689085af 515 PRINTS PR00175 Sodium/alanine symporter signature 189 207 4.5E-57 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 M892_07505 e5cb6aa67512d772496d1ab1689085af 515 PRINTS PR00175 Sodium/alanine symporter signature 365 387 4.5E-57 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 M892_07505 e5cb6aa67512d772496d1ab1689085af 515 PRINTS PR00175 Sodium/alanine symporter signature 428 448 4.5E-57 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 M892_07505 e5cb6aa67512d772496d1ab1689085af 515 PRINTS PR00175 Sodium/alanine symporter signature 86 108 4.5E-57 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 M892_26500 b82abc7d4f67658ba4f863a20f4435aa 347 Gene3D G3DSA:3.40.190.170 20 325 2.8E-83 T 12-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily M892_26500 b82abc7d4f67658ba4f863a20f4435aa 347 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 25 309 2.8E-63 T 12-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 M892_05940 538d7a906b1afad397cfa6924cd51267 619 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 299 320 - T 12-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 M892_05940 538d7a906b1afad397cfa6924cd51267 619 Gene3D G3DSA:1.10.4030.30 240 373 7.7E-35 T 12-10-2018 M892_05940 538d7a906b1afad397cfa6924cd51267 619 Gene3D G3DSA:3.10.50.40 269 363 7.7E-35 T 12-10-2018 M892_05940 538d7a906b1afad397cfa6924cd51267 619 SUPERFAMILY SSF109998 39 245 8.63E-39 T 12-10-2018 IPR027304 Trigger factor/SurA domain superfamily M892_05940 538d7a906b1afad397cfa6924cd51267 619 Pfam PF13616 PPIC-type PPIASE domain 262 361 3.7E-24 T 12-10-2018 M892_05940 538d7a906b1afad397cfa6924cd51267 619 Pfam PF13624 SurA N-terminal domain 1 166 4.6E-51 T 12-10-2018 M892_05940 538d7a906b1afad397cfa6924cd51267 619 SUPERFAMILY SSF54534 225 361 8.5E-32 T 12-10-2018 M892_05940 538d7a906b1afad397cfa6924cd51267 619 Gene3D G3DSA:1.10.4030.30 42 175 2.1E-15 T 12-10-2018 M892_25410 5537017628205fe41e5751e24cc10a21 435 SUPERFAMILY SSF118215 32 416 1.27E-84 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 M892_25410 5537017628205fe41e5751e24cc10a21 435 Gene3D G3DSA:1.10.3860.10 2 431 1.1E-94 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 M892_25410 5537017628205fe41e5751e24cc10a21 435 PRINTS PR00173 Glutamate-aspartate symporter signature 59 79 9.8E-44 T 12-10-2018 M892_25410 5537017628205fe41e5751e24cc10a21 435 PRINTS PR00173 Glutamate-aspartate symporter signature 241 260 9.8E-44 T 12-10-2018 M892_25410 5537017628205fe41e5751e24cc10a21 435 PRINTS PR00173 Glutamate-aspartate symporter signature 370 390 9.8E-44 T 12-10-2018 M892_25410 5537017628205fe41e5751e24cc10a21 435 PRINTS PR00173 Glutamate-aspartate symporter signature 159 181 9.8E-44 T 12-10-2018 M892_25410 5537017628205fe41e5751e24cc10a21 435 PRINTS PR00173 Glutamate-aspartate symporter signature 308 334 9.8E-44 T 12-10-2018 M892_25410 5537017628205fe41e5751e24cc10a21 435 PRINTS PR00173 Glutamate-aspartate symporter signature 343 362 9.8E-44 T 12-10-2018 M892_25410 5537017628205fe41e5751e24cc10a21 435 PRINTS PR00173 Glutamate-aspartate symporter signature 89 114 9.8E-44 T 12-10-2018 M892_25410 5537017628205fe41e5751e24cc10a21 435 Pfam PF00375 Sodium:dicarboxylate symporter family 40 416 1.3E-87 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 M892_21495 7b994ea51466994e733d22321a20ab07 433 Gene3D G3DSA:3.90.1150.10 60 422 4.0E-141 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M892_21495 7b994ea51466994e733d22321a20ab07 433 Gene3D G3DSA:3.40.640.10 99 330 4.0E-141 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M892_21495 7b994ea51466994e733d22321a20ab07 433 SUPERFAMILY SSF53383 81 426 7.18E-74 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M892_21495 7b994ea51466994e733d22321a20ab07 433 Pfam PF00155 Aminotransferase class I and II 87 419 6.3E-31 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 M892_01710 dc7f32ef322da0f6945e887209564c81 639 SUPERFAMILY SSF52540 310 517 2.47E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_01710 dc7f32ef322da0f6945e887209564c81 639 Gene3D G3DSA:3.40.50.300 4 279 1.4E-68 T 12-10-2018 M892_01710 dc7f32ef322da0f6945e887209564c81 639 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_01710 dc7f32ef322da0f6945e887209564c81 639 SUPERFAMILY SSF52540 3 245 4.19E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_01710 dc7f32ef322da0f6945e887209564c81 639 Pfam PF16326 ABC transporter C-terminal domain 565 633 2.8E-21 T 12-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 M892_01710 dc7f32ef322da0f6945e887209564c81 639 Gene3D G3DSA:1.10.287.380 555 638 1.4E-28 T 12-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 M892_01710 dc7f32ef322da0f6945e887209564c81 639 Pfam PF00005 ABC transporter 336 469 7.5E-24 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_01710 dc7f32ef322da0f6945e887209564c81 639 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_01710 dc7f32ef322da0f6945e887209564c81 639 Gene3D G3DSA:3.40.50.300 281 551 2.0E-67 T 12-10-2018 M892_01710 dc7f32ef322da0f6945e887209564c81 639 Pfam PF12848 ABC transporter 224 297 1.2E-10 T 12-10-2018 IPR032781 ABC-transporter extension domain M892_01710 dc7f32ef322da0f6945e887209564c81 639 Pfam PF00005 ABC transporter 19 185 4.1E-24 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_01710 dc7f32ef322da0f6945e887209564c81 639 SMART SM00382 28 230 1.5E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_01710 dc7f32ef322da0f6945e887209564c81 639 SMART SM00382 344 514 1.2E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_02030 871b41ed5d5bf014b23a8224f1afb8eb 680 PRINTS PR00344 Bacterial sensor protein C-terminal signature 601 615 7.9E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_02030 871b41ed5d5bf014b23a8224f1afb8eb 680 PRINTS PR00344 Bacterial sensor protein C-terminal signature 654 667 7.9E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_02030 871b41ed5d5bf014b23a8224f1afb8eb 680 PRINTS PR00344 Bacterial sensor protein C-terminal signature 630 648 7.9E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_02030 871b41ed5d5bf014b23a8224f1afb8eb 680 PRINTS PR00344 Bacterial sensor protein C-terminal signature 619 629 7.9E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_02030 871b41ed5d5bf014b23a8224f1afb8eb 680 Gene3D G3DSA:3.30.565.10 521 673 6.0E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_02030 871b41ed5d5bf014b23a8224f1afb8eb 680 SMART SM00388 449 516 3.3E-9 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M892_02030 871b41ed5d5bf014b23a8224f1afb8eb 680 SUPERFAMILY SSF103190 166 311 9.68E-13 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily M892_02030 871b41ed5d5bf014b23a8224f1afb8eb 680 SUPERFAMILY SSF47384 444 513 1.53E-11 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M892_02030 871b41ed5d5bf014b23a8224f1afb8eb 680 SMART SM00387 559 670 2.7E-26 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_02030 871b41ed5d5bf014b23a8224f1afb8eb 680 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 563 668 2.5E-17 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_02030 871b41ed5d5bf014b23a8224f1afb8eb 680 Pfam PF17202 Single cache domain 3 205 319 2.3E-28 T 12-10-2018 IPR033463 Single cache domain 3 M892_02030 871b41ed5d5bf014b23a8224f1afb8eb 680 Pfam PF00512 His Kinase A (phospho-acceptor) domain 449 514 1.9E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M892_02030 871b41ed5d5bf014b23a8224f1afb8eb 680 SUPERFAMILY SSF55874 506 668 1.03E-34 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_02030 871b41ed5d5bf014b23a8224f1afb8eb 680 Gene3D G3DSA:1.10.287.130 441 514 5.6E-22 T 12-10-2018 M892_00205 003e8389fbf7c88fd17dd527231766ae 171 Pfam PF00583 Acetyltransferase (GNAT) family 40 143 1.0E-14 T 12-10-2018 IPR000182 GNAT domain M892_00205 003e8389fbf7c88fd17dd527231766ae 171 Gene3D G3DSA:3.40.630.30 4 167 1.3E-33 T 12-10-2018 M892_00205 003e8389fbf7c88fd17dd527231766ae 171 SUPERFAMILY SSF55729 1 153 2.53E-26 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_04485 e1915f03b1a9a3cac12e53984eedd7d7 705 PIRSF PIRSF005419 1 705 2.7E-266 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 M892_04485 e1915f03b1a9a3cac12e53984eedd7d7 705 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 137 160 - T 12-10-2018 IPR025505 FHIPEP conserved site M892_04485 e1915f03b1a9a3cac12e53984eedd7d7 705 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 132 148 4.9E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 M892_04485 e1915f03b1a9a3cac12e53984eedd7d7 705 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 33 46 4.9E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 M892_04485 e1915f03b1a9a3cac12e53984eedd7d7 705 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 232 246 4.9E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 M892_04485 e1915f03b1a9a3cac12e53984eedd7d7 705 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 151 169 4.9E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 M892_04485 e1915f03b1a9a3cac12e53984eedd7d7 705 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 181 198 4.9E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 M892_04485 e1915f03b1a9a3cac12e53984eedd7d7 705 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 70 89 4.9E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 M892_04485 e1915f03b1a9a3cac12e53984eedd7d7 705 TIGRFAM TIGR01399 hrcV: type III secretion protein, HrcV family 14 703 2.3E-300 T 12-10-2018 IPR006302 Type III secretion protein HrcV GO:0015031|GO:0016021 M892_04485 e1915f03b1a9a3cac12e53984eedd7d7 705 Gene3D G3DSA:3.40.30.60 369 514 3.7E-43 T 12-10-2018 M892_04485 e1915f03b1a9a3cac12e53984eedd7d7 705 Pfam PF00771 FHIPEP family 26 695 6.6E-240 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 M892_04485 e1915f03b1a9a3cac12e53984eedd7d7 705 Gene3D G3DSA:1.10.490.80 605 703 6.7E-34 T 12-10-2018 M892_04485 e1915f03b1a9a3cac12e53984eedd7d7 705 Gene3D G3DSA:1.10.8.540 515 603 1.9E-32 T 12-10-2018 M892_26825 d6c47c629413ea110635dfe843f59f1e 238 Gene3D G3DSA:3.40.30.10 68 238 1.9E-34 T 12-10-2018 M892_26825 d6c47c629413ea110635dfe843f59f1e 238 SUPERFAMILY SSF52833 68 233 1.21E-32 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M892_26825 d6c47c629413ea110635dfe843f59f1e 238 Pfam PF13462 Thioredoxin 77 234 3.6E-18 T 12-10-2018 IPR012336 Thioredoxin-like fold M892_20925 48b2ba35ca7cb5eded9516591380a8af 385 Pfam PF01609 Transposase DDE domain 132 293 2.6E-15 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_20925 48b2ba35ca7cb5eded9516591380a8af 385 SUPERFAMILY SSF53098 8 372 1.74E-54 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_10905 bf19ff5963d67d4228b48b9ccf16fe8b 471 Gene3D G3DSA:3.20.20.70 221 449 3.0E-50 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M892_10905 bf19ff5963d67d4228b48b9ccf16fe8b 471 Pfam PF02581 Thiamine monophosphate synthase 236 429 2.1E-49 T 12-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 M892_10905 bf19ff5963d67d4228b48b9ccf16fe8b 471 SUPERFAMILY SSF51391 226 447 5.62E-57 T 12-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 M892_24660 dfa192edc7ab3112dccf307d674f5355 204 PIRSF PIRSF006324 1 203 4.6E-41 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 M892_24660 dfa192edc7ab3112dccf307d674f5355 204 Pfam PF01810 LysE type translocator 15 201 4.8E-31 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 M892_12040 a7e69a6e0f48a81f9ddf2af8a62a80be 285 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 9 285 49.527 T 12-10-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 M892_12040 a7e69a6e0f48a81f9ddf2af8a62a80be 285 Pfam PF02666 Phosphatidylserine decarboxylase 62 280 8.3E-62 T 12-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 M892_12040 a7e69a6e0f48a81f9ddf2af8a62a80be 285 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 48 283 4.3E-86 T 12-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 M892_09690 e1668307618c6dd140d6bf92944c5f44 207 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 12-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 M892_09690 e1668307618c6dd140d6bf92944c5f44 207 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 4 184 8.4E-76 T 12-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 M892_09690 e1668307618c6dd140d6bf92944c5f44 207 SUPERFAMILY SSF52540 3 189 2.8E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_09690 e1668307618c6dd140d6bf92944c5f44 207 Gene3D G3DSA:3.30.63.10 37 96 5.2E-74 T 12-10-2018 M892_09690 e1668307618c6dd140d6bf92944c5f44 207 Hamap MF_00328 Guanylate kinase [gmk]. 2 187 38.088 T 12-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 M892_09690 e1668307618c6dd140d6bf92944c5f44 207 Pfam PF00625 Guanylate kinase 5 185 9.9E-62 T 12-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit M892_09690 e1668307618c6dd140d6bf92944c5f44 207 Gene3D G3DSA:3.40.50.300 8 183 5.2E-74 T 12-10-2018 M892_09690 e1668307618c6dd140d6bf92944c5f44 207 SMART SM00072 3 187 1.8E-75 T 12-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit M892_10770 70da2c0614f8f5be2c4d47910c017700 458 Gene3D G3DSA:3.40.50.720 2 139 1.6E-51 T 12-10-2018 M892_10770 70da2c0614f8f5be2c4d47910c017700 458 Pfam PF02254 TrkA-N domain 3 123 3.9E-29 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 M892_10770 70da2c0614f8f5be2c4d47910c017700 458 Pfam PF02254 TrkA-N domain 235 350 5.0E-25 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 M892_10770 70da2c0614f8f5be2c4d47910c017700 458 Gene3D G3DSA:3.30.70.1450 140 232 1.5E-21 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 M892_10770 70da2c0614f8f5be2c4d47910c017700 458 Pfam PF02080 TrkA-C domain 156 225 4.2E-11 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 M892_10770 70da2c0614f8f5be2c4d47910c017700 458 Pfam PF02080 TrkA-C domain 391 449 3.0E-9 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 M892_10770 70da2c0614f8f5be2c4d47910c017700 458 SUPERFAMILY SSF116726 136 223 2.62E-9 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 M892_10770 70da2c0614f8f5be2c4d47910c017700 458 SUPERFAMILY SSF51735 1 151 8.06E-36 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_10770 70da2c0614f8f5be2c4d47910c017700 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 8.0E-34 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 M892_10770 70da2c0614f8f5be2c4d47910c017700 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 8.0E-34 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 M892_10770 70da2c0614f8f5be2c4d47910c017700 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 8.0E-34 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 M892_10770 70da2c0614f8f5be2c4d47910c017700 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 8.0E-34 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 M892_10770 70da2c0614f8f5be2c4d47910c017700 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 8.0E-34 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 M892_10770 70da2c0614f8f5be2c4d47910c017700 458 SUPERFAMILY SSF116726 366 437 3.27E-7 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 M892_10770 70da2c0614f8f5be2c4d47910c017700 458 Gene3D G3DSA:3.40.50.720 233 366 3.0E-38 T 12-10-2018 M892_10770 70da2c0614f8f5be2c4d47910c017700 458 SUPERFAMILY SSF51735 232 376 2.58E-33 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_10770 70da2c0614f8f5be2c4d47910c017700 458 Gene3D G3DSA:3.30.70.1450 367 458 1.4E-28 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 M892_03935 38abcfc62238fb97679cb8e6e2d22760 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.6E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_03935 38abcfc62238fb97679cb8e6e2d22760 290 Pfam PF03466 LysR substrate binding domain 90 249 5.5E-16 T 12-10-2018 IPR005119 LysR, substrate-binding M892_03935 38abcfc62238fb97679cb8e6e2d22760 290 SUPERFAMILY SSF46785 3 85 6.68E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_03935 38abcfc62238fb97679cb8e6e2d22760 290 Gene3D G3DSA:3.40.190.290 93 288 1.2E-33 T 12-10-2018 M892_03935 38abcfc62238fb97679cb8e6e2d22760 290 SUPERFAMILY SSF53850 90 288 1.57E-21 T 12-10-2018 M892_03935 38abcfc62238fb97679cb8e6e2d22760 290 Gene3D G3DSA:1.10.10.10 2 86 8.3E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_11980 2e28d26af31f2556b06b52e449beee3b 382 Pfam PF01551 Peptidase family M23 282 375 7.8E-24 T 12-10-2018 IPR016047 Peptidase M23 M892_11980 2e28d26af31f2556b06b52e449beee3b 382 Gene3D G3DSA:2.70.70.10 241 381 4.6E-34 T 12-10-2018 IPR011055 Duplicated hybrid motif M892_11980 2e28d26af31f2556b06b52e449beee3b 382 SUPERFAMILY SSF51261 148 379 4.03E-47 T 12-10-2018 IPR011055 Duplicated hybrid motif M892_05415 ca9bf2d23e3f15ca2590156539033cd3 431 Pfam PF04285 Protein of unknown function (DUF444) 11 429 8.5E-188 T 12-10-2018 IPR006698 Uncharacterised protein family UPF0229 M892_05415 ca9bf2d23e3f15ca2590156539033cd3 431 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 8 431 40.567 T 12-10-2018 IPR006698 Uncharacterised protein family UPF0229 M892_00625 6ce3969a735aca06deab0342730be262 207 Pfam PF03575 Peptidase family S51 6 182 1.3E-35 T 12-10-2018 IPR005320 Peptidase S51 GO:0006508|GO:0008236 M892_00625 6ce3969a735aca06deab0342730be262 207 Gene3D G3DSA:3.40.50.880 4 205 1.5E-34 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M892_00625 6ce3969a735aca06deab0342730be262 207 SUPERFAMILY SSF52317 11 182 1.2E-22 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M892_16970 1f8f6f1a26ccc0a601e8c4b983183148 127 Pfam PF01042 Endoribonuclease L-PSP 7 125 6.6E-44 T 12-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 M892_16970 1f8f6f1a26ccc0a601e8c4b983183148 127 SUPERFAMILY SSF55298 2 126 2.2E-47 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 M892_16970 1f8f6f1a26ccc0a601e8c4b983183148 127 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 2 125 4.2E-51 T 12-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 M892_16970 1f8f6f1a26ccc0a601e8c4b983183148 127 Gene3D G3DSA:3.30.1330.40 1 127 3.3E-53 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 M892_21305 20ad84dbd16ac3d28245b75ba08e049e 316 SUPERFAMILY SSF81345 6 312 6.67E-59 T 12-10-2018 IPR037294 ABC transporter, BtuC-like M892_21305 20ad84dbd16ac3d28245b75ba08e049e 316 Gene3D G3DSA:1.10.3470.10 4 315 1.5E-57 T 12-10-2018 IPR037294 ABC transporter, BtuC-like M892_21305 20ad84dbd16ac3d28245b75ba08e049e 316 Pfam PF01032 FecCD transport family 27 312 4.2E-54 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 M892_07710 278e9f1f6233c75c18cb2adb6cab0c58 202 PIRSF PIRSF000239 1 201 7.0E-59 T 12-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 M892_07710 278e9f1f6233c75c18cb2adb6cab0c58 202 Gene3D G3DSA:3.40.30.10 1 197 1.5E-71 T 12-10-2018 M892_07710 278e9f1f6233c75c18cb2adb6cab0c58 202 SUPERFAMILY SSF52833 1 194 4.88E-66 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M892_07710 278e9f1f6233c75c18cb2adb6cab0c58 202 Pfam PF00578 AhpC/TSA family 4 139 2.4E-33 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 M892_07710 278e9f1f6233c75c18cb2adb6cab0c58 202 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 193 3.0E-8 T 12-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 M892_24280 0067ec7f258a5cd007a3a8b4fe61dd5b 112 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 14 109 21.992 T 12-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 M892_24280 0067ec7f258a5cd007a3a8b4fe61dd5b 112 SUPERFAMILY SSF55248 16 109 1.26E-33 T 12-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 M892_24280 0067ec7f258a5cd007a3a8b4fe61dd5b 112 Gene3D G3DSA:3.30.1360.20 15 112 1.1E-32 T 12-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 M892_24280 0067ec7f258a5cd007a3a8b4fe61dd5b 112 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 16 107 8.6E-32 T 12-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 M892_25525 b6d337d88a78620ca5e7856ee5e26cac 318 Gene3D G3DSA:1.10.8.300 199 315 2.7E-40 T 12-10-2018 M892_25525 b6d337d88a78620ca5e7856ee5e26cac 318 Gene3D G3DSA:3.40.50.300 17 183 7.5E-46 T 12-10-2018 M892_25525 b6d337d88a78620ca5e7856ee5e26cac 318 PIRSF PIRSF002849 1 318 5.4E-129 T 12-10-2018 M892_25525 b6d337d88a78620ca5e7856ee5e26cac 318 SUPERFAMILY SSF52540 6 290 3.17E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_25525 b6d337d88a78620ca5e7856ee5e26cac 318 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 36 166 1.3E-62 T 12-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 M892_16065 5900b2886df1b89ab384a0ea4462031e 144 ProDom PD087558 YRN2_VIBPA ORF2 VV1184 VV13101 MOTY 3'REGION VC1009 VP2110 1 143 2.0E-70 T 12-10-2018 IPR020206 Uncharacterised protein family, VP2110 M892_16065 5900b2886df1b89ab384a0ea4462031e 144 Pfam PF10952 Protein of unknown function (DUF2753) 5 144 6.5E-76 T 12-10-2018 IPR020206 Uncharacterised protein family, VP2110 M892_20135 4e2c46b321eef6212f811aaf6e754b76 305 Gene3D G3DSA:3.40.1090.10 112 231 1.3E-8 T 12-10-2018 M892_20135 4e2c46b321eef6212f811aaf6e754b76 305 Gene3D G3DSA:3.40.1090.10 11 111 2.6E-10 T 12-10-2018 M892_20135 4e2c46b321eef6212f811aaf6e754b76 305 SUPERFAMILY SSF52151 29 298 1.31E-35 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase M892_20135 4e2c46b321eef6212f811aaf6e754b76 305 Pfam PF01734 Patatin-like phospholipase 32 198 6.9E-18 T 12-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 M892_13315 3e3fe444230113ebdf820d05073c95f9 209 Pfam PF01810 LysE type translocator 15 201 3.3E-41 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 M892_11290 68fbc7d229d41757f9763793d4f801e9 224 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 7.8E-90 T 12-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 M892_11290 68fbc7d229d41757f9763793d4f801e9 224 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_11290 68fbc7d229d41757f9763793d4f801e9 224 Pfam PF00005 ABC transporter 18 165 2.6E-36 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_11290 68fbc7d229d41757f9763793d4f801e9 224 Gene3D G3DSA:3.40.50.300 1 223 3.0E-61 T 12-10-2018 M892_11290 68fbc7d229d41757f9763793d4f801e9 224 SMART SM00382 27 214 4.2E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_11290 68fbc7d229d41757f9763793d4f801e9 224 SUPERFAMILY SSF52540 1 220 1.77E-64 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_05235 f55d29e96c38f46285d9ad59a92a87a0 105 ProSitePatterns PS01358 Zinc finger RanBP2-type signature. 79 98 - T 12-10-2018 IPR001876 Zinc finger, RanBP2-type M892_05235 f55d29e96c38f46285d9ad59a92a87a0 105 Pfam PF09413 Putative prokaryotic signal transducing protein 2 68 8.3E-8 T 12-10-2018 IPR018551 Domain of unknown function DUF2007 M892_15560 c91a1cb8c77fd5920318a1d16a0c03af 420 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 144 159 - T 12-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 M892_15560 c91a1cb8c77fd5920318a1d16a0c03af 420 SUPERFAMILY SSF53623 12 285 6.41E-85 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 M892_15560 c91a1cb8c77fd5920318a1d16a0c03af 420 PIRSF PIRSF001563 6 420 5.6E-105 T 12-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 M892_15560 c91a1cb8c77fd5920318a1d16a0c03af 420 Gene3D G3DSA:3.90.190.20 288 419 5.2E-34 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 M892_15560 c91a1cb8c77fd5920318a1d16a0c03af 420 Gene3D G3DSA:3.40.1190.10 1 287 4.7E-91 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 M892_15560 c91a1cb8c77fd5920318a1d16a0c03af 420 TIGRFAM TIGR01499 folC: bifunctional protein FolC 32 414 7.9E-104 T 12-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 M892_15560 c91a1cb8c77fd5920318a1d16a0c03af 420 Pfam PF02875 Mur ligase family, glutamate ligase domain 287 339 7.3E-7 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 M892_15560 c91a1cb8c77fd5920318a1d16a0c03af 420 SUPERFAMILY SSF53244 288 416 6.96E-31 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 M892_15560 c91a1cb8c77fd5920318a1d16a0c03af 420 Pfam PF08245 Mur ligase middle domain 54 193 9.3E-7 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 M892_04685 768b6318c516f549b804f75c8098123c 148 SUPERFAMILY SSF69635 5 130 2.98E-19 T 12-10-2018 M892_04685 768b6318c516f549b804f75c8098123c 148 Gene3D G3DSA:3.30.1460.10 1 131 3.6E-26 T 12-10-2018 M892_04685 768b6318c516f549b804f75c8098123c 148 Pfam PF05932 Tir chaperone protein (CesT) family 11 124 5.1E-12 T 12-10-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 M892_24100 53bd557be38a635e3ef020426f76cb9c 205 SUPERFAMILY SSF56925 18 205 1.36E-27 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel M892_24100 53bd557be38a635e3ef020426f76cb9c 205 Pfam PF13505 Outer membrane protein beta-barrel domain 5 205 1.6E-22 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel M892_24100 53bd557be38a635e3ef020426f76cb9c 205 Gene3D G3DSA:2.40.160.20 18 205 1.9E-26 T 12-10-2018 M892_02160 ec7a76d95ef4dc12dc821404ca09abe6 64 Pfam PF14255 Cysteine-rich CPXCG 9 59 2.5E-21 T 12-10-2018 IPR025990 Cysteine-rich CPXCG protein M892_02160 ec7a76d95ef4dc12dc821404ca09abe6 64 PIRSF PIRSF037225 1 64 1.2E-23 T 12-10-2018 IPR017143 Uncharacterised conserved protein UCP037225 M892_14170 8fa2aa8eeb8ae31ba0eb62fcf8f02509 167 SUPERFAMILY SSF55729 1 127 3.77E-27 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_14170 8fa2aa8eeb8ae31ba0eb62fcf8f02509 167 Gene3D G3DSA:3.40.630.30 1 167 7.5E-47 T 12-10-2018 M892_14170 8fa2aa8eeb8ae31ba0eb62fcf8f02509 167 Pfam PF13527 Acetyltransferase (GNAT) domain 3 123 1.3E-10 T 12-10-2018 M892_22620 8c1ad0b73a61768b6f1e1b30d7669959 414 Gene3D G3DSA:2.40.160.60 22 414 1.7E-126 T 12-10-2018 M892_22620 8c1ad0b73a61768b6f1e1b30d7669959 414 SUPERFAMILY SSF56935 22 413 5.04E-96 T 12-10-2018 M892_22620 8c1ad0b73a61768b6f1e1b30d7669959 414 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 14 413 3.1E-131 T 12-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) M892_23410 95bc40965c75b8bb81b054f39ff36fd1 145 Pfam PF00583 Acetyltransferase (GNAT) family 28 127 1.1E-10 T 12-10-2018 IPR000182 GNAT domain M892_23410 95bc40965c75b8bb81b054f39ff36fd1 145 SUPERFAMILY SSF55729 1 135 5.49E-24 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_23410 95bc40965c75b8bb81b054f39ff36fd1 145 Gene3D G3DSA:3.40.630.30 45 144 5.2E-21 T 12-10-2018 M892_20045 7693b05f6cdbe313a3136c1c11b0d2c3 393 Pfam PF11301 Protein of unknown function (DUF3103) 33 392 5.7E-166 T 12-10-2018 IPR021452 Protein of unknown function DUF3103 M892_12125 1b57a3cad37f2f903cf9db83037e778b 576 Gene3D G3DSA:3.40.630.40 158 402 3.0E-69 T 12-10-2018 M892_12125 1b57a3cad37f2f903cf9db83037e778b 576 Gene3D G3DSA:3.10.350.10 404 466 2.4E-16 T 12-10-2018 IPR036779 LysM domain superfamily M892_12125 1b57a3cad37f2f903cf9db83037e778b 576 Gene3D G3DSA:3.10.350.10 467 525 1.5E-14 T 12-10-2018 IPR036779 LysM domain superfamily M892_12125 1b57a3cad37f2f903cf9db83037e778b 576 Gene3D G3DSA:3.10.350.10 526 576 1.2E-15 T 12-10-2018 IPR036779 LysM domain superfamily M892_12125 1b57a3cad37f2f903cf9db83037e778b 576 Pfam PF11741 AMIN domain 34 135 6.2E-19 T 12-10-2018 IPR021731 AMIN domain M892_12125 1b57a3cad37f2f903cf9db83037e778b 576 SUPERFAMILY SSF54106 531 574 4.71E-10 T 12-10-2018 M892_12125 1b57a3cad37f2f903cf9db83037e778b 576 Pfam PF01476 LysM domain 414 456 1.1E-15 T 12-10-2018 IPR018392 LysM domain M892_12125 1b57a3cad37f2f903cf9db83037e778b 576 Pfam PF01476 LysM domain 479 521 4.0E-11 T 12-10-2018 IPR018392 LysM domain M892_12125 1b57a3cad37f2f903cf9db83037e778b 576 Pfam PF01476 LysM domain 532 574 6.7E-13 T 12-10-2018 IPR018392 LysM domain M892_12125 1b57a3cad37f2f903cf9db83037e778b 576 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 172 392 1.2E-49 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 M892_12125 1b57a3cad37f2f903cf9db83037e778b 576 SMART SM00257 413 456 7.0E-17 T 12-10-2018 IPR018392 LysM domain M892_12125 1b57a3cad37f2f903cf9db83037e778b 576 SMART SM00257 478 521 7.1E-14 T 12-10-2018 IPR018392 LysM domain M892_12125 1b57a3cad37f2f903cf9db83037e778b 576 SMART SM00257 531 574 1.4E-12 T 12-10-2018 IPR018392 LysM domain M892_12125 1b57a3cad37f2f903cf9db83037e778b 576 SUPERFAMILY SSF54106 413 456 8.63E-11 T 12-10-2018 M892_12125 1b57a3cad37f2f903cf9db83037e778b 576 SUPERFAMILY SSF53187 170 395 3.45E-53 T 12-10-2018 M892_12125 1b57a3cad37f2f903cf9db83037e778b 576 Gene3D G3DSA:2.60.40.3500 23 137 2.1E-27 T 12-10-2018 M892_12125 1b57a3cad37f2f903cf9db83037e778b 576 SUPERFAMILY SSF54106 477 521 1.7E-9 T 12-10-2018 M892_12125 1b57a3cad37f2f903cf9db83037e778b 576 SMART SM00646 233 392 1.9E-63 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 M892_02390 96157b8151bb173e5ec25d53fb8b5308 497 SMART SM00495 447 496 8.3E-6 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 M892_02390 96157b8151bb173e5ec25d53fb8b5308 497 SUPERFAMILY SSF51055 448 495 5.1E-7 T 12-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 M892_02390 96157b8151bb173e5ec25d53fb8b5308 497 Gene3D G3DSA:2.70.50.50 27 216 2.3E-59 T 12-10-2018 M892_02390 96157b8151bb173e5ec25d53fb8b5308 497 Gene3D G3DSA:2.10.10.20 446 494 9.0E-9 T 12-10-2018 M892_02390 96157b8151bb173e5ec25d53fb8b5308 497 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 27 211 7.2E-37 T 12-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal M892_02390 96157b8151bb173e5ec25d53fb8b5308 497 SUPERFAMILY SSF81296 27 213 1.09E-47 T 12-10-2018 IPR014756 Immunoglobulin E-set M892_27085 a3edc216e7be54d3a9193991e8c73220 173 Gene3D G3DSA:2.60.40.1090 30 172 2.4E-31 T 12-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 M892_27085 a3edc216e7be54d3a9193991e8c73220 173 SUPERFAMILY SSF49401 31 172 2.68E-32 T 12-10-2018 IPR008966 Adhesion domain superfamily M892_12510 608d72701e584a02f1b2ac10cb4de3a9 129 Pfam PF01250 Ribosomal protein S6 3 91 3.2E-28 T 12-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_12510 608d72701e584a02f1b2ac10cb4de3a9 129 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 12-10-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 M892_12510 608d72701e584a02f1b2ac10cb4de3a9 129 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 5.6E-38 T 12-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_12510 608d72701e584a02f1b2ac10cb4de3a9 129 Gene3D G3DSA:3.30.70.60 1 92 8.1E-33 T 12-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 M892_12510 608d72701e584a02f1b2ac10cb4de3a9 129 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 22.092 T 12-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 M892_12510 608d72701e584a02f1b2ac10cb4de3a9 129 SUPERFAMILY SSF54995 1 103 3.01E-38 T 12-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_09525 10070b3410170debdfb610a09fa8e6ae 238 SUPERFAMILY SSF56112 37 194 1.62E-17 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily M892_09525 10070b3410170debdfb610a09fa8e6ae 238 Hamap MF_00521 3-deoxy-D-manno-octulosonic acid kinase [kdkA]. 2 234 41.149 T 12-10-2018 IPR022826 3-deoxy-D-manno-octulosonic acid kinase GO:0016773 KEGG: 00540+2.7.1.166|MetaCyc: PWY-7675|MetaCyc: PWY-7676 M892_09525 10070b3410170debdfb610a09fa8e6ae 238 Gene3D G3DSA:1.10.510.10 138 238 7.3E-14 T 12-10-2018 M892_09525 10070b3410170debdfb610a09fa8e6ae 238 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 31 232 2.4E-66 T 12-10-2018 M892_25475 8aebcdd5d4e7caf95ad3d841e5aacf8c 464 Gene3D G3DSA:3.30.565.10 311 463 2.1E-31 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_25475 8aebcdd5d4e7caf95ad3d841e5aacf8c 464 SMART SM00388 246 312 1.5E-8 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M892_25475 8aebcdd5d4e7caf95ad3d841e5aacf8c 464 SUPERFAMILY SSF47384 234 308 2.16E-11 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M892_25475 8aebcdd5d4e7caf95ad3d841e5aacf8c 464 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 351 461 6.5E-17 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_25475 8aebcdd5d4e7caf95ad3d841e5aacf8c 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 437 1.1E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_25475 8aebcdd5d4e7caf95ad3d841e5aacf8c 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 447 460 1.1E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_25475 8aebcdd5d4e7caf95ad3d841e5aacf8c 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 402 1.1E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_25475 8aebcdd5d4e7caf95ad3d841e5aacf8c 464 SMART SM00387 351 463 1.4E-27 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_25475 8aebcdd5d4e7caf95ad3d841e5aacf8c 464 SUPERFAMILY SSF55874 307 461 1.05E-30 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_25475 8aebcdd5d4e7caf95ad3d841e5aacf8c 464 Gene3D G3DSA:1.10.287.130 232 310 8.7E-15 T 12-10-2018 M892_25475 8aebcdd5d4e7caf95ad3d841e5aacf8c 464 Pfam PF00512 His Kinase A (phospho-acceptor) domain 247 307 2.6E-9 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M892_26995 be527ca5e83931655576c9d52c304f09 513 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 34 425 9.9E-75 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 M892_26995 be527ca5e83931655576c9d52c304f09 513 Pfam PF00474 Sodium:solute symporter family 34 425 1.2E-51 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 M892_26995 be527ca5e83931655576c9d52c304f09 513 Gene3D G3DSA:1.20.1730.10 22 511 1.4E-105 T 12-10-2018 IPR038377 Sodium/glucose symporter superfamily M892_09985 203c7fcfab7c101eca34d0c0f1c31ce6 132 Pfam PF02416 mttA/Hcf106 family 4 32 8.7E-5 T 12-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 M892_09985 203c7fcfab7c101eca34d0c0f1c31ce6 132 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 80 2.1E-32 T 12-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 M892_09985 203c7fcfab7c101eca34d0c0f1c31ce6 132 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 132 18.204 T 12-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 M892_09985 203c7fcfab7c101eca34d0c0f1c31ce6 132 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 3.8E-27 T 12-10-2018 M892_09985 203c7fcfab7c101eca34d0c0f1c31ce6 132 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 3.8E-27 T 12-10-2018 M892_09985 203c7fcfab7c101eca34d0c0f1c31ce6 132 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 3.8E-27 T 12-10-2018 M892_10835 ea8e5d59f092e51938f0281e91e7b9e0 183 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 13 40 0.0021 T 12-10-2018 IPR001451 Hexapeptide repeat M892_10835 ea8e5d59f092e51938f0281e91e7b9e0 183 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 96 129 3.3E-7 T 12-10-2018 IPR001451 Hexapeptide repeat M892_10835 ea8e5d59f092e51938f0281e91e7b9e0 183 Gene3D G3DSA:2.160.10.10 1 183 5.6E-56 T 12-10-2018 M892_10835 ea8e5d59f092e51938f0281e91e7b9e0 183 SUPERFAMILY SSF51161 4 175 1.14E-44 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily M892_11270 537433579337490bb83a97d98b136297 194 Pfam PF01914 MarC family integral membrane protein 3 192 5.0E-54 T 12-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 M892_11270 537433579337490bb83a97d98b136297 194 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 6 189 3.3E-30 T 12-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 M892_09045 aad628cf5d47d61dd3973fdfa39fc0ac 653 Gene3D G3DSA:3.60.21.10 22 360 1.5E-139 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like M892_09045 aad628cf5d47d61dd3973fdfa39fc0ac 653 Pfam PF02872 5'-nucleotidase, C-terminal domain 362 553 1.2E-20 T 12-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M892_09045 aad628cf5d47d61dd3973fdfa39fc0ac 653 SUPERFAMILY SSF55816 361 603 9.29E-36 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M892_09045 aad628cf5d47d61dd3973fdfa39fc0ac 653 TIGRFAM TIGR01390 CycNucDiestase: 2',3'-cyclic-nucleotide 2'-phosphodiesterase 29 653 0.0 T 12-10-2018 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase GO:0008663|GO:0009117 KEGG: 00230+3.1.4.16+3.1.3.6|KEGG: 00240+3.1.4.16+3.1.3.6 M892_09045 aad628cf5d47d61dd3973fdfa39fc0ac 653 PRINTS PR01607 Apyrase family signature 289 309 2.9E-29 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M892_09045 aad628cf5d47d61dd3973fdfa39fc0ac 653 PRINTS PR01607 Apyrase family signature 28 46 2.9E-29 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M892_09045 aad628cf5d47d61dd3973fdfa39fc0ac 653 PRINTS PR01607 Apyrase family signature 434 457 2.9E-29 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M892_09045 aad628cf5d47d61dd3973fdfa39fc0ac 653 PRINTS PR01607 Apyrase family signature 221 238 2.9E-29 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M892_09045 aad628cf5d47d61dd3973fdfa39fc0ac 653 PRINTS PR01607 Apyrase family signature 536 555 2.9E-29 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M892_09045 aad628cf5d47d61dd3973fdfa39fc0ac 653 PRINTS PR01607 Apyrase family signature 249 272 2.9E-29 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M892_09045 aad628cf5d47d61dd3973fdfa39fc0ac 653 Gene3D G3DSA:3.90.780.10 417 592 9.1E-49 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M892_09045 aad628cf5d47d61dd3973fdfa39fc0ac 653 ProSitePatterns PS00786 5'-nucleotidase signature 2. 115 126 - T 12-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M892_09045 aad628cf5d47d61dd3973fdfa39fc0ac 653 SUPERFAMILY SSF56300 23 360 6.96E-89 T 12-10-2018 M892_09045 aad628cf5d47d61dd3973fdfa39fc0ac 653 Pfam PF00149 Calcineurin-like phosphoesterase 30 265 2.6E-11 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 M892_25595 0bbd87cefe084535b50b2fdbb6765094 380 Pfam PF07603 Protein of unknown function (DUF1566) 291 378 4.0E-10 T 12-10-2018 IPR011460 Protein of unknown function DUF1566 M892_04500 094809c3936fc65c9ef864f232372d1e 124 Pfam PF05932 Tir chaperone protein (CesT) family 9 117 1.5E-4 T 12-10-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 M892_04500 094809c3936fc65c9ef864f232372d1e 124 TIGRFAM TIGR02503 type_III_SycN: type III secretion chaperone SycN 4 122 1.0E-52 T 12-10-2018 IPR012673 Type III secretion system chaperone SycN GO:0009306 M892_04500 094809c3936fc65c9ef864f232372d1e 124 SUPERFAMILY SSF69635 2 122 6.67E-46 T 12-10-2018 M892_04500 094809c3936fc65c9ef864f232372d1e 124 Gene3D G3DSA:3.30.1460.10 1 123 4.8E-43 T 12-10-2018 M892_06400 0df83cb8b446c598bc78b1ff1016f263 263 Pfam PF01925 Sulfite exporter TauE/SafE 22 261 6.4E-35 T 12-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 M892_02655 c267489fa305c8bf79f3ad83a9f1a0f3 599 Gene3D G3DSA:1.20.140.70 21 169 3.4E-11 T 12-10-2018 M892_02655 c267489fa305c8bf79f3ad83a9f1a0f3 599 TIGRFAM TIGR02290 M3_fam_3: oligoendopeptidase, pepF/M3 family 5 593 3.2E-202 T 12-10-2018 IPR011977 Peptidase M3B, oligoendopeptidase-related clade 3 M892_02655 c267489fa305c8bf79f3ad83a9f1a0f3 599 Gene3D G3DSA:1.10.1370.20 219 598 8.2E-109 T 12-10-2018 M892_02655 c267489fa305c8bf79f3ad83a9f1a0f3 599 SUPERFAMILY SSF55486 4 576 2.04E-93 T 12-10-2018 M892_02655 c267489fa305c8bf79f3ad83a9f1a0f3 599 Pfam PF08439 Oligopeptidase F 106 174 2.4E-11 T 12-10-2018 IPR013647 Oligopeptidase F, N-terminal domain M892_02655 c267489fa305c8bf79f3ad83a9f1a0f3 599 Pfam PF01432 Peptidase family M3 335 579 1.7E-22 T 12-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 M892_12700 aed6f68361d92ac8cffbc7c915f4ac39 216 Pfam PF04612 Type II secretion system (T2SS), protein M 7 94 1.3E-8 T 12-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 M892_12815 a75d97682e735be7390ab50060bf05f7 458 Pfam PF13638 PIN domain 9 150 1.9E-35 T 12-10-2018 IPR002716 PIN domain M892_12815 a75d97682e735be7390ab50060bf05f7 458 Gene3D G3DSA:3.40.50.300 245 456 4.8E-65 T 12-10-2018 M892_12815 a75d97682e735be7390ab50060bf05f7 458 Gene3D G3DSA:3.40.50.1010 3 155 4.5E-28 T 12-10-2018 M892_12815 a75d97682e735be7390ab50060bf05f7 458 SUPERFAMILY SSF88723 7 155 4.51E-14 T 12-10-2018 IPR029060 PIN-like domain superfamily M892_12815 a75d97682e735be7390ab50060bf05f7 458 Pfam PF02562 PhoH-like protein 248 452 8.5E-54 T 12-10-2018 IPR003714 PhoH-like protein GO:0005524 M892_12815 a75d97682e735be7390ab50060bf05f7 458 SMART SM00670 7 141 9.0E-12 T 12-10-2018 IPR002716 PIN domain M892_12815 a75d97682e735be7390ab50060bf05f7 458 SUPERFAMILY SSF52540 247 437 1.16E-28 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_06625 f0d05c0c0ab7099886be91bdc5afda1f 212 PIRSF PIRSF028688 1 212 7.2E-118 T 12-10-2018 IPR014549 Flagellar protein FlgO M892_21100 c40a52d3a2fa431281b8d9fe8e68d32d 199 SUPERFAMILY SSF48498 105 192 2.45E-15 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily M892_21100 c40a52d3a2fa431281b8d9fe8e68d32d 199 Hamap MF_00768 HTH-type transcriptional regulator BetI [betI]. 1 198 96.441 T 12-10-2018 IPR017757 Transcriptional repressor BetI M892_21100 c40a52d3a2fa431281b8d9fe8e68d32d 199 SUPERFAMILY SSF46689 4 78 1.39E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_21100 c40a52d3a2fa431281b8d9fe8e68d32d 199 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 85 192 1.8E-31 T 12-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal M892_21100 c40a52d3a2fa431281b8d9fe8e68d32d 199 Gene3D G3DSA:1.10.357.10 5 195 1.3E-45 T 12-10-2018 M892_21100 c40a52d3a2fa431281b8d9fe8e68d32d 199 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site M892_21100 c40a52d3a2fa431281b8d9fe8e68d32d 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 59 1.6E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M892_21100 c40a52d3a2fa431281b8d9fe8e68d32d 199 TIGRFAM TIGR03384 betaine_BetI: transcriptional repressor BetI 2 192 2.8E-75 T 12-10-2018 IPR017757 Transcriptional repressor BetI M892_06065 e415cf6aa4a0ab93d8ef9aa2b4dc4958 273 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 27 272 1.7E-46 T 12-10-2018 M892_06065 e415cf6aa4a0ab93d8ef9aa2b4dc4958 273 TIGRFAM TIGR04316 dhbA_paeA: 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase 24 272 3.9E-92 T 12-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 M892_06065 e415cf6aa4a0ab93d8ef9aa2b4dc4958 273 SUPERFAMILY SSF51735 19 272 2.04E-61 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_06065 e415cf6aa4a0ab93d8ef9aa2b4dc4958 273 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 27 44 2.6E-46 T 12-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 M892_06065 e415cf6aa4a0ab93d8ef9aa2b4dc4958 273 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 225 244 2.6E-46 T 12-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 M892_06065 e415cf6aa4a0ab93d8ef9aa2b4dc4958 273 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 100 117 2.6E-46 T 12-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 M892_06065 e415cf6aa4a0ab93d8ef9aa2b4dc4958 273 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 120 140 2.6E-46 T 12-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 M892_06065 e415cf6aa4a0ab93d8ef9aa2b4dc4958 273 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 186 209 2.6E-46 T 12-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 M892_06065 e415cf6aa4a0ab93d8ef9aa2b4dc4958 273 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 251 270 2.6E-46 T 12-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 M892_06065 e415cf6aa4a0ab93d8ef9aa2b4dc4958 273 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 158 186 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 M892_06065 e415cf6aa4a0ab93d8ef9aa2b4dc4958 273 Gene3D G3DSA:3.40.50.720 3 273 7.2E-67 T 12-10-2018 M892_23570 508d0766a7c165b043236fb1a4ba9e18 962 Pfam PF00704 Glycosyl hydrolases family 18 629 940 2.3E-16 T 12-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 M892_23570 508d0766a7c165b043236fb1a4ba9e18 962 SMART SM00636 626 941 0.0033 T 12-10-2018 IPR011583 Chitinase II GO:0008061 M892_23570 508d0766a7c165b043236fb1a4ba9e18 962 Gene3D G3DSA:2.60.40.10 166 262 2.2E-5 T 12-10-2018 IPR013783 Immunoglobulin-like fold M892_23570 508d0766a7c165b043236fb1a4ba9e18 962 Gene3D G3DSA:2.60.40.10 429 524 2.2E-15 T 12-10-2018 IPR013783 Immunoglobulin-like fold M892_23570 508d0766a7c165b043236fb1a4ba9e18 962 Gene3D G3DSA:2.60.40.10 266 362 1.3E-15 T 12-10-2018 IPR013783 Immunoglobulin-like fold M892_23570 508d0766a7c165b043236fb1a4ba9e18 962 Gene3D G3DSA:2.60.40.10 526 616 4.2E-20 T 12-10-2018 IPR013783 Immunoglobulin-like fold M892_23570 508d0766a7c165b043236fb1a4ba9e18 962 SUPERFAMILY SSF51445 627 946 7.38E-34 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily M892_15155 2e5c1ed0d91857784ab6c2ce99d32aac 116 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 112 2.3E-31 T 12-10-2018 IPR006504 Transcriptional regulator Spx/MgsR M892_15155 2e5c1ed0d91857784ab6c2ce99d32aac 116 Pfam PF03960 ArsC family 6 112 2.3E-19 T 12-10-2018 IPR006660 Arsenate reductase-like M892_15155 2e5c1ed0d91857784ab6c2ce99d32aac 116 SUPERFAMILY SSF52833 2 114 1.36E-35 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M892_15155 2e5c1ed0d91857784ab6c2ce99d32aac 116 Gene3D G3DSA:3.40.30.10 2 114 3.1E-42 T 12-10-2018 M892_11780 9a5bbaddefc725081d2f89531402b8e3 399 PIRSF PIRSF004925 1 386 3.2E-106 T 12-10-2018 IPR026032 Probable 3-phenylpropionic acid transporter M892_11780 9a5bbaddefc725081d2f89531402b8e3 399 SUPERFAMILY SSF103473 8 373 3.27E-37 T 12-10-2018 IPR036259 MFS transporter superfamily M892_11780 9a5bbaddefc725081d2f89531402b8e3 399 Pfam PF12832 MFS_1 like family 13 362 6.3E-40 T 12-10-2018 IPR024989 Major facilitator superfamily associated domain M892_11780 9a5bbaddefc725081d2f89531402b8e3 399 Gene3D G3DSA:1.20.1250.20 195 385 1.1E-34 T 12-10-2018 M892_11780 9a5bbaddefc725081d2f89531402b8e3 399 Gene3D G3DSA:1.20.1250.20 2 184 7.2E-18 T 12-10-2018 M892_08975 3bad3f6436c1052288bc18a9dd0020f6 212 Pfam PF01625 Peptide methionine sulfoxide reductase 44 197 2.2E-68 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 M892_08975 3bad3f6436c1052288bc18a9dd0020f6 212 Gene3D G3DSA:3.30.1060.10 3 212 7.5E-92 T 12-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 M892_08975 3bad3f6436c1052288bc18a9dd0020f6 212 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 42 203 38.566 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 M892_08975 3bad3f6436c1052288bc18a9dd0020f6 212 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 44 197 3.7E-68 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 M892_08975 3bad3f6436c1052288bc18a9dd0020f6 212 SUPERFAMILY SSF55068 2 207 1.15E-79 T 12-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 M892_14540 32ef1d5ca6ca8d635b5796718dcf66c1 455 TIGRFAM TIGR00712 glpT: glycerol-3-phosphate transporter 1 439 3.6E-236 T 12-10-2018 IPR005267 Glycerol-3-phosphate transporter GO:0015169|GO:0015794|GO:0016021 M892_14540 32ef1d5ca6ca8d635b5796718dcf66c1 455 Pfam PF07690 Major Facilitator Superfamily 34 401 1.7E-50 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 M892_14540 32ef1d5ca6ca8d635b5796718dcf66c1 455 PIRSF PIRSF002808 5 452 1.1E-169 T 12-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 M892_14540 32ef1d5ca6ca8d635b5796718dcf66c1 455 Gene3D G3DSA:1.20.1250.20 241 452 1.3E-62 T 12-10-2018 M892_14540 32ef1d5ca6ca8d635b5796718dcf66c1 455 SUPERFAMILY SSF103473 16 445 9.02E-87 T 12-10-2018 IPR036259 MFS transporter superfamily M892_14540 32ef1d5ca6ca8d635b5796718dcf66c1 455 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 418 3.1E-151 T 12-10-2018 M892_14540 32ef1d5ca6ca8d635b5796718dcf66c1 455 ProSitePatterns PS00942 glpT family of transporters signature. 153 169 - T 12-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 M892_14540 32ef1d5ca6ca8d635b5796718dcf66c1 455 Gene3D G3DSA:1.20.1250.20 18 227 2.2E-58 T 12-10-2018 M892_02540 db1bc0f958751101f52efaf24ebcc7b1 284 Gene3D G3DSA:3.30.420.470 72 277 4.6E-12 T 12-10-2018 M892_02540 db1bc0f958751101f52efaf24ebcc7b1 284 Pfam PF13358 DDE superfamily endonuclease 106 249 1.9E-34 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_02540 db1bc0f958751101f52efaf24ebcc7b1 284 Pfam PF13592 Winged helix-turn helix 35 92 5.3E-20 T 12-10-2018 IPR025959 Winged helix-turn helix domain M892_02540 db1bc0f958751101f52efaf24ebcc7b1 284 SUPERFAMILY SSF53098 158 255 1.24E-7 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_27480 ac53a31218576a1a4434ea47d4807b5b 391 Pfam PF02371 Transposase IS116/IS110/IS902 family 265 343 7.1E-22 T 12-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 M892_27480 ac53a31218576a1a4434ea47d4807b5b 391 Pfam PF01548 Transposase 61 200 8.1E-15 T 12-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 M892_26525 783e60382f99867ab1be67799e9d8755 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 25 36 1.9E-11 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 M892_26525 783e60382f99867ab1be67799e9d8755 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 36 55 1.9E-11 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 M892_26525 783e60382f99867ab1be67799e9d8755 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 9 25 1.9E-11 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 M892_26525 783e60382f99867ab1be67799e9d8755 161 SUPERFAMILY SSF54909 71 158 1.74E-15 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel M892_26525 783e60382f99867ab1be67799e9d8755 161 SMART SM00344 9 118 3.0E-30 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 M892_26525 783e60382f99867ab1be67799e9d8755 161 Pfam PF13404 AsnC-type helix-turn-helix domain 10 50 7.2E-13 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 M892_26525 783e60382f99867ab1be67799e9d8755 161 Gene3D G3DSA:3.30.70.920 61 153 6.0E-19 T 12-10-2018 M892_26525 783e60382f99867ab1be67799e9d8755 161 Gene3D G3DSA:1.10.10.10 9 60 2.2E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_26525 783e60382f99867ab1be67799e9d8755 161 Pfam PF01037 Lrp/AsnC ligand binding domain 75 148 1.5E-17 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain M892_26525 783e60382f99867ab1be67799e9d8755 161 SUPERFAMILY SSF46785 9 68 2.96E-13 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_19645 35a811c28e6d5c8ced102693e1a4a007 539 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 48 526 1.9E-144 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 M892_12840 048b23255214224d2a95078c54a66294 174 Pfam PF04751 Protein of unknown function (DUF615) 18 168 3.4E-56 T 12-10-2018 IPR006839 Ribosome-associated, YjgA M892_12840 048b23255214224d2a95078c54a66294 174 Gene3D G3DSA:1.10.60.30 103 174 5.1E-24 T 12-10-2018 M892_12840 048b23255214224d2a95078c54a66294 174 Gene3D G3DSA:1.10.60.30 28 102 3.4E-26 T 12-10-2018 M892_12840 048b23255214224d2a95078c54a66294 174 SUPERFAMILY SSF158710 28 169 2.62E-51 T 12-10-2018 IPR023153 PSPTO4464-like domain superfamily M892_12840 048b23255214224d2a95078c54a66294 174 PIRSF PIRSF016183 1 174 6.5E-72 T 12-10-2018 IPR006839 Ribosome-associated, YjgA M892_12840 048b23255214224d2a95078c54a66294 174 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 10 172 22.879 T 12-10-2018 IPR006839 Ribosome-associated, YjgA M892_08765 8a4b5d25485394f80dcf586f53d8ff08 319 Pfam PF03466 LysR substrate binding domain 121 308 8.2E-24 T 12-10-2018 IPR005119 LysR, substrate-binding M892_08765 8a4b5d25485394f80dcf586f53d8ff08 319 Gene3D G3DSA:1.10.10.10 14 104 2.9E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_08765 8a4b5d25485394f80dcf586f53d8ff08 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 25 84 1.3E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_08765 8a4b5d25485394f80dcf586f53d8ff08 319 Gene3D G3DSA:3.40.190.10 187 283 4.9E-41 T 12-10-2018 M892_08765 8a4b5d25485394f80dcf586f53d8ff08 319 SUPERFAMILY SSF53850 106 308 1.21E-39 T 12-10-2018 M892_08765 8a4b5d25485394f80dcf586f53d8ff08 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 61 1.4E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_08765 8a4b5d25485394f80dcf586f53d8ff08 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 61 72 1.4E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_08765 8a4b5d25485394f80dcf586f53d8ff08 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.4E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_08765 8a4b5d25485394f80dcf586f53d8ff08 319 SUPERFAMILY SSF46785 22 99 3.45E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_08765 8a4b5d25485394f80dcf586f53d8ff08 319 Gene3D G3DSA:3.40.190.10 108 307 4.9E-41 T 12-10-2018 M892_09670 770485519feec4e0f13b49ae149b4eb9 175 Pfam PF01618 MotA/TolQ/ExbB proton channel family 52 168 1.3E-20 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel M892_07240 219ccbfaacca3be71df6d301a99498b8 136 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 27 2.9E-8 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M892_07240 219ccbfaacca3be71df6d301a99498b8 136 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 5.9E-5 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M892_07240 219ccbfaacca3be71df6d301a99498b8 136 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M892_19060 177347a3bf9e00ec7bc1cc9975b1cff2 224 Gene3D G3DSA:3.40.50.1000 5 218 3.8E-64 T 12-10-2018 IPR023214 HAD superfamily M892_19060 177347a3bf9e00ec7bc1cc9975b1cff2 224 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 194 5.3E-23 T 12-10-2018 M892_19060 177347a3bf9e00ec7bc1cc9975b1cff2 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 184 197 3.9E-8 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M892_19060 177347a3bf9e00ec7bc1cc9975b1cff2 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 3.9E-8 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M892_19060 177347a3bf9e00ec7bc1cc9975b1cff2 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 3.9E-8 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M892_19060 177347a3bf9e00ec7bc1cc9975b1cff2 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 137 153 3.9E-8 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M892_19060 177347a3bf9e00ec7bc1cc9975b1cff2 224 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 68 195 1.1E-8 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M892_19060 177347a3bf9e00ec7bc1cc9975b1cff2 224 Gene3D G3DSA:1.10.150.240 16 95 3.8E-64 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 M892_19060 177347a3bf9e00ec7bc1cc9975b1cff2 224 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 97 189 4.6E-16 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M892_19060 177347a3bf9e00ec7bc1cc9975b1cff2 224 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 3 222 7.5E-87 T 12-10-2018 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 M892_19060 177347a3bf9e00ec7bc1cc9975b1cff2 224 SUPERFAMILY SSF56784 2 222 2.61E-49 T 12-10-2018 IPR036412 HAD-like superfamily M892_09360 daef862980f7c9cd694e44cb387e0bf6 324 SUPERFAMILY SSF50969 100 305 2.98E-6 T 12-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like M892_15055 c188a230775bf5544e848fb04b5f7602 281 SUPERFAMILY SSF56235 2 253 1.54E-51 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal M892_15055 c188a230775bf5544e848fb04b5f7602 281 Pfam PF13230 Glutamine amidotransferases class-II 1 259 3.8E-114 T 12-10-2018 IPR026869 Putative glutamine amidotransferase type 2 M892_15055 c188a230775bf5544e848fb04b5f7602 281 Gene3D G3DSA:3.60.20.10 1 259 1.9E-99 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal M892_15765 2fb84db53ec8698a19d75621801fbda8 317 SUPERFAMILY SSF53335 41 292 6.72E-46 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M892_15765 2fb84db53ec8698a19d75621801fbda8 317 Pfam PF13847 Methyltransferase domain 124 239 1.9E-13 T 12-10-2018 IPR025714 Methyltransferase domain M892_15765 2fb84db53ec8698a19d75621801fbda8 317 PIRSF PIRSF018249 30 310 5.8E-85 T 12-10-2018 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 M892_15765 2fb84db53ec8698a19d75621801fbda8 317 Gene3D G3DSA:3.40.50.150 38 310 1.1E-79 T 12-10-2018 M892_12220 1d18819821dae07da8c5b39640a07cb8 339 SUPERFAMILY SSF55729 1 338 1.36E-128 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_12220 1d18819821dae07da8c5b39640a07cb8 339 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 337 3.3E-136 T 12-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 M892_12220 1d18819821dae07da8c5b39640a07cb8 339 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 338 2.1E-132 T 12-10-2018 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 M892_12220 1d18819821dae07da8c5b39640a07cb8 339 Gene3D G3DSA:3.40.630.30 1 274 5.1E-112 T 12-10-2018 M892_12220 1d18819821dae07da8c5b39640a07cb8 339 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 338 1.3E-131 T 12-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 M892_12220 1d18819821dae07da8c5b39640a07cb8 339 Gene3D G3DSA:2.40.40.20 277 339 1.0E-5 T 12-10-2018 M892_16655 b7b9e61dad62059f7da43af4fc489898 391 SMART SM00028 216 249 230.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_16655 b7b9e61dad62059f7da43af4fc489898 391 SMART SM00028 141 174 460.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_16655 b7b9e61dad62059f7da43af4fc489898 391 SMART SM00028 182 215 0.064 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_16655 b7b9e61dad62059f7da43af4fc489898 391 SMART SM00028 69 102 81.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_16655 b7b9e61dad62059f7da43af4fc489898 391 SUPERFAMILY SSF48452 109 285 3.79E-18 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_16655 b7b9e61dad62059f7da43af4fc489898 391 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 4 389 36.769 T 12-10-2018 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 M892_16655 b7b9e61dad62059f7da43af4fc489898 391 Gene3D G3DSA:1.25.40.10 21 357 4.0E-33 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_16655 b7b9e61dad62059f7da43af4fc489898 391 Pfam PF13176 Tetratricopeptide repeat 71 94 0.025 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_16655 b7b9e61dad62059f7da43af4fc489898 391 Pfam PF13181 Tetratricopeptide repeat 182 215 0.01 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_16655 b7b9e61dad62059f7da43af4fc489898 391 SUPERFAMILY SSF48452 37 97 5.42E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_20880 b2fd0dec97d91a2f96356e54e3b56ae2 468 Gene3D G3DSA:1.10.3080.10 32 468 2.0E-138 T 12-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 M892_20880 b2fd0dec97d91a2f96356e54e3b56ae2 468 PRINTS PR00762 Chloride channel signature 102 119 1.0E-26 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 M892_20880 b2fd0dec97d91a2f96356e54e3b56ae2 468 PRINTS PR00762 Chloride channel signature 183 202 1.0E-26 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 M892_20880 b2fd0dec97d91a2f96356e54e3b56ae2 468 PRINTS PR00762 Chloride channel signature 387 403 1.0E-26 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 M892_20880 b2fd0dec97d91a2f96356e54e3b56ae2 468 PRINTS PR00762 Chloride channel signature 352 372 1.0E-26 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 M892_20880 b2fd0dec97d91a2f96356e54e3b56ae2 468 PRINTS PR00762 Chloride channel signature 405 424 1.0E-26 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 M892_20880 b2fd0dec97d91a2f96356e54e3b56ae2 468 Hamap MF_01128 H(+)/Cl(-) exchange transporter ClcA [clcA]. 1 468 51.225 T 12-10-2018 IPR023861 Chloride channel, ClcA GO:0005887|GO:0006821|GO:0015108 M892_20880 b2fd0dec97d91a2f96356e54e3b56ae2 468 Pfam PF00654 Voltage gated chloride channel 89 437 5.2E-94 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 M892_20880 b2fd0dec97d91a2f96356e54e3b56ae2 468 SUPERFAMILY SSF81340 30 453 1.14E-112 T 12-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 M892_19270 1ca5e2564ad4a68435f56eb878dbb077 427 SUPERFAMILY SSF54826 5 137 1.92E-53 T 12-10-2018 M892_19270 1ca5e2564ad4a68435f56eb878dbb077 427 Gene3D G3DSA:3.20.20.120 129 427 4.2E-122 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily M892_19270 1ca5e2564ad4a68435f56eb878dbb077 427 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 5 426 2.7E-183 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 M892_19270 1ca5e2564ad4a68435f56eb878dbb077 427 SUPERFAMILY SSF51604 141 425 4.39E-115 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily M892_19270 1ca5e2564ad4a68435f56eb878dbb077 427 SMART SM01193 5 135 1.5E-88 T 12-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 M892_19270 1ca5e2564ad4a68435f56eb878dbb077 427 Hamap MF_00318 Enolase [eno]. 3 413 42.34 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 M892_19270 1ca5e2564ad4a68435f56eb878dbb077 427 Gene3D G3DSA:3.30.390.10 4 128 2.9E-52 T 12-10-2018 IPR029017 Enolase-like, N-terminal M892_19270 1ca5e2564ad4a68435f56eb878dbb077 427 Pfam PF00113 Enolase, C-terminal TIM barrel domain 142 424 5.1E-115 T 12-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 M892_19270 1ca5e2564ad4a68435f56eb878dbb077 427 PIRSF PIRSF001400 1 426 1.4E-180 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 M892_19270 1ca5e2564ad4a68435f56eb878dbb077 427 Pfam PF03952 Enolase, N-terminal domain 5 135 1.5E-56 T 12-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 M892_19270 1ca5e2564ad4a68435f56eb878dbb077 427 SMART SM01192 140 427 3.4E-191 T 12-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 M892_19270 1ca5e2564ad4a68435f56eb878dbb077 427 PRINTS PR00148 Enolase signature 108 124 6.7E-43 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 M892_19270 1ca5e2564ad4a68435f56eb878dbb077 427 PRINTS PR00148 Enolase signature 365 382 6.7E-43 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 M892_19270 1ca5e2564ad4a68435f56eb878dbb077 427 PRINTS PR00148 Enolase signature 38 52 6.7E-43 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 M892_19270 1ca5e2564ad4a68435f56eb878dbb077 427 PRINTS PR00148 Enolase signature 336 350 6.7E-43 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 M892_19270 1ca5e2564ad4a68435f56eb878dbb077 427 PRINTS PR00148 Enolase signature 163 176 6.7E-43 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 M892_19270 1ca5e2564ad4a68435f56eb878dbb077 427 PRINTS PR00148 Enolase signature 313 324 6.7E-43 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 M892_22400 da3658f36292289bbe6d56e6212007a0 533 Pfam PF06812 ImpA, N-terminal, type VI secretion system 10 120 2.0E-26 T 12-10-2018 IPR010657 ImpA, N-terminal M892_22400 da3658f36292289bbe6d56e6212007a0 533 TIGRFAM TIGR03362 VI_chp_7: type VI secretion-associated protein, VC_A0119 family 6 506 4.0E-78 T 12-10-2018 IPR017739 Type VI secretion system-associated, VCA0119 M892_22400 da3658f36292289bbe6d56e6212007a0 533 Pfam PF16989 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ 255 506 1.8E-67 T 12-10-2018 IPR017739 Type VI secretion system-associated, VCA0119 M892_27185 8dcdee3c0de2feaae66742cc04246764 365 Gene3D G3DSA:1.25.40.10 69 231 9.0E-9 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_27185 8dcdee3c0de2feaae66742cc04246764 365 SUPERFAMILY SSF48452 81 160 3.56E-9 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_27185 8dcdee3c0de2feaae66742cc04246764 365 Pfam PF02698 DUF218 domain 194 313 2.6E-19 T 12-10-2018 IPR003848 Domain of unknown function DUF218 M892_11695 0dbe996e60d6b01da1df5a99605183f4 108 Pfam PF13358 DDE superfamily endonuclease 3 76 3.9E-17 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_11695 0dbe996e60d6b01da1df5a99605183f4 108 Gene3D G3DSA:3.30.420.470 1 102 2.2E-12 T 12-10-2018 M892_10190 334b50faed0b876d4980457cc4876c98 234 Pfam PF00043 Glutathione S-transferase, C-terminal domain 102 189 1.5E-6 T 12-10-2018 IPR004046 Glutathione S-transferase, C-terminal M892_10190 334b50faed0b876d4980457cc4876c98 234 Pfam PF13417 Glutathione S-transferase, N-terminal domain 7 78 6.9E-20 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 M892_10190 334b50faed0b876d4980457cc4876c98 234 Gene3D G3DSA:1.20.1050.10 89 209 4.7E-15 T 12-10-2018 M892_10190 334b50faed0b876d4980457cc4876c98 234 SUPERFAMILY SSF47616 87 199 2.09E-18 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily M892_10190 334b50faed0b876d4980457cc4876c98 234 Gene3D G3DSA:3.40.30.10 1 88 2.0E-27 T 12-10-2018 M892_10190 334b50faed0b876d4980457cc4876c98 234 SUPERFAMILY SSF52833 3 102 2.44E-22 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M892_26245 348772a1b7c607c8dc89dca222bf1a1d 48 Gene3D G3DSA:3.10.180.10 1 47 7.3E-10 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M892_26245 348772a1b7c607c8dc89dca222bf1a1d 48 SUPERFAMILY SSF54593 2 47 1.69E-10 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M892_26245 348772a1b7c607c8dc89dca222bf1a1d 48 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 45 3.8E-5 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain M892_12760 a3d04d6edef1ac6f278b53828789251d 237 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 25 2.6E-6 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M892_12760 a3d04d6edef1ac6f278b53828789251d 237 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 25 1.6E-5 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M892_06560 feaf0c1061947b43f29e196840cc5c31 259 PRINTS PR01008 Flagellar L-ring protein signature 222 236 4.8E-21 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 M892_06560 feaf0c1061947b43f29e196840cc5c31 259 PRINTS PR01008 Flagellar L-ring protein signature 238 252 4.8E-21 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 M892_06560 feaf0c1061947b43f29e196840cc5c31 259 PRINTS PR01008 Flagellar L-ring protein signature 201 217 4.8E-21 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 M892_06560 feaf0c1061947b43f29e196840cc5c31 259 PRINTS PR01008 Flagellar L-ring protein signature 102 114 4.8E-21 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 M892_06560 feaf0c1061947b43f29e196840cc5c31 259 PRINTS PR01008 Flagellar L-ring protein signature 175 190 4.8E-21 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 M892_06560 feaf0c1061947b43f29e196840cc5c31 259 Pfam PF02107 Flagellar L-ring protein 80 257 3.0E-56 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 M892_06560 feaf0c1061947b43f29e196840cc5c31 259 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 259 27.605 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 M892_06505 056ce10d5ff1dcac7a4c6ed934a8b57f 350 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 2 192 1.4E-36 T 12-10-2018 IPR000477 Reverse transcriptase domain M892_06505 056ce10d5ff1dcac7a4c6ed934a8b57f 350 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 1 270 1.8E-92 T 12-10-2018 IPR030931 Group II intron reverse transcriptase/maturase M892_06505 056ce10d5ff1dcac7a4c6ed934a8b57f 350 Pfam PF08388 Group II intron, maturase-specific domain 208 276 1.2E-14 T 12-10-2018 IPR013597 Group II intron, maturase-specific M892_06505 056ce10d5ff1dcac7a4c6ed934a8b57f 350 SUPERFAMILY SSF56672 2 280 1.89E-42 T 12-10-2018 M892_16410 e1c6948166c5d0ae9e3b5d8c149e80e8 316 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 227 315 1.8E-34 T 12-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 M892_16410 e1c6948166c5d0ae9e3b5d8c149e80e8 316 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 183 1.9E-31 T 12-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 M892_16410 e1c6948166c5d0ae9e3b5d8c149e80e8 316 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 316 1.4E-143 T 12-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 M892_16410 e1c6948166c5d0ae9e3b5d8c149e80e8 316 Gene3D G3DSA:3.40.47.10 1 316 3.2E-127 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M892_16410 e1c6948166c5d0ae9e3b5d8c149e80e8 316 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 316 72.508 T 12-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 M892_16410 e1c6948166c5d0ae9e3b5d8c149e80e8 316 SUPERFAMILY SSF53901 3 315 7.69E-71 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M892_25735 f4df8bb545e34683ea2edbb2e8325997 114 SUPERFAMILY SSF55729 25 113 3.01E-24 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_25735 f4df8bb545e34683ea2edbb2e8325997 114 Pfam PF14542 GCN5-related N-acetyl-transferase 37 112 6.9E-23 T 12-10-2018 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase M892_25735 f4df8bb545e34683ea2edbb2e8325997 114 Gene3D G3DSA:3.40.630.30 24 114 5.3E-23 T 12-10-2018 M892_26785 c498365c8aacc7e2dc3542e407784387 386 Pfam PF01609 Transposase DDE domain 78 301 1.3E-18 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_26785 c498365c8aacc7e2dc3542e407784387 386 SUPERFAMILY SSF53098 54 312 1.52E-22 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_12115 bf52b82531ee4562d6f87d628581f911 375 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 3 311 50.242 T 12-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 M892_12115 bf52b82531ee4562d6f87d628581f911 375 SUPERFAMILY SSF54862 165 281 8.79E-19 T 12-10-2018 M892_12115 bf52b82531ee4562d6f87d628581f911 375 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 10 344 4.9E-150 T 12-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 M892_12115 bf52b82531ee4562d6f87d628581f911 375 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 189 200 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M892_12115 bf52b82531ee4562d6f87d628581f911 375 Pfam PF08331 Domain of unknown function (DUF1730) 58 136 6.3E-23 T 12-10-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 M892_12115 bf52b82531ee4562d6f87d628581f911 375 Pfam PF13484 4Fe-4S double cluster binding domain 188 252 6.4E-19 T 12-10-2018 M892_05510 e6d01722d734e16bf1a99d8a2854c346 130 Gene3D G3DSA:2.60.40.3230 18 130 4.4E-27 T 12-10-2018 IPR038483 YcfL-like superfamily M892_05510 e6d01722d734e16bf1a99d8a2854c346 130 Pfam PF07233 Protein of unknown function (DUF1425) 35 125 6.6E-29 T 12-10-2018 IPR010824 Protein of unknown function DUF1425 M892_04720 f20bcfb66a11ef3d6c49de537039bef3 453 SUPERFAMILY SSF53098 117 380 1.37E-22 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_04720 f20bcfb66a11ef3d6c49de537039bef3 453 Pfam PF13006 Insertion element 4 transposase N-terminal 35 125 9.7E-21 T 12-10-2018 IPR024473 Transposase, IS4, N-terminal M892_04720 f20bcfb66a11ef3d6c49de537039bef3 453 Pfam PF01609 Transposase DDE domain 145 368 9.9E-19 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_06665 f411ea5e2d8c733079c8a879be1ccbb8 373 SUPERFAMILY SSF56935 44 373 2.66E-40 T 12-10-2018 M892_06665 f411ea5e2d8c733079c8a879be1ccbb8 373 Gene3D G3DSA:2.40.160.10 44 373 2.9E-43 T 12-10-2018 IPR023614 Porin domain superfamily M892_06665 f411ea5e2d8c733079c8a879be1ccbb8 373 Pfam PF13609 Gram-negative porin 10 342 6.5E-35 T 12-10-2018 M892_06665 f411ea5e2d8c733079c8a879be1ccbb8 373 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 177 188 3.0E-5 T 12-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 M892_06665 f411ea5e2d8c733079c8a879be1ccbb8 373 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 117 127 3.0E-5 T 12-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 M892_06665 f411ea5e2d8c733079c8a879be1ccbb8 373 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 365 373 3.0E-5 T 12-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 M892_06665 f411ea5e2d8c733079c8a879be1ccbb8 373 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 278 290 3.0E-5 T 12-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 M892_06665 f411ea5e2d8c733079c8a879be1ccbb8 373 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 73 84 3.0E-5 T 12-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 M892_26305 dc93c5e92f735f3daf8db9fe71dcb61c 243 SUPERFAMILY SSF160527 124 233 1.31E-5 T 12-10-2018 M892_26305 dc93c5e92f735f3daf8db9fe71dcb61c 243 Pfam PF02108 Flagellar assembly protein FliH 98 220 1.1E-27 T 12-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE M892_17955 2ee8fcfc518b308a7ff5733f535e976b 229 Pfam PF13416 Bacterial extracellular solute-binding protein 13 160 4.6E-14 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein M892_17955 2ee8fcfc518b308a7ff5733f535e976b 229 SUPERFAMILY SSF53850 15 222 9.66E-30 T 12-10-2018 M892_17955 2ee8fcfc518b308a7ff5733f535e976b 229 Gene3D G3DSA:3.40.190.10 12 215 5.1E-34 T 12-10-2018 M892_17955 2ee8fcfc518b308a7ff5733f535e976b 229 Gene3D G3DSA:3.40.190.10 106 154 5.1E-34 T 12-10-2018 M892_13925 d42bffe6cf0275d48e5601be7816d55c 343 SMART SM00382 29 214 1.3E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_13925 d42bffe6cf0275d48e5601be7816d55c 343 Pfam PF08402 TOBE domain 276 341 1.4E-7 T 12-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 M892_13925 d42bffe6cf0275d48e5601be7816d55c 343 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_13925 d42bffe6cf0275d48e5601be7816d55c 343 Gene3D G3DSA:3.40.50.300 1 240 9.8E-75 T 12-10-2018 M892_13925 d42bffe6cf0275d48e5601be7816d55c 343 Pfam PF00005 ABC transporter 20 164 1.6E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_13925 d42bffe6cf0275d48e5601be7816d55c 343 SUPERFAMILY SSF50331 263 342 2.66E-9 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal M892_13925 d42bffe6cf0275d48e5601be7816d55c 343 SUPERFAMILY SSF52540 5 243 6.02E-79 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_22100 d11ad8cf4d569b3451aeda4ff43d85bd 434 Pfam PF00294 pfkB family carbohydrate kinase 138 300 5.4E-12 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB M892_22100 d11ad8cf4d569b3451aeda4ff43d85bd 434 SUPERFAMILY SSF53613 34 417 3.41E-47 T 12-10-2018 IPR029056 Ribokinase-like M892_23445 5f3d6f3a518bdf6080ce2cc8b22b196d 156 SMART SM00953 15 143 5.0E-16 T 12-10-2018 IPR014914 RES domain M892_23445 5f3d6f3a518bdf6080ce2cc8b22b196d 156 Pfam PF08808 RES domain 2 151 4.1E-25 T 12-10-2018 IPR014914 RES domain M892_19580 64eae2e17196d47dee28360f58e2eb27 145 Pfam PF09278 MerR, DNA binding 45 110 6.0E-18 T 12-10-2018 IPR015358 Transcription regulator MerR, DNA binding M892_19580 64eae2e17196d47dee28360f58e2eb27 145 SMART SM00422 3 71 1.5E-25 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 M892_19580 64eae2e17196d47dee28360f58e2eb27 145 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 2 142 1.2E-67 T 12-10-2018 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 M892_19580 64eae2e17196d47dee28360f58e2eb27 145 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 2.1E-13 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 M892_19580 64eae2e17196d47dee28360f58e2eb27 145 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 2.1E-13 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 M892_19580 64eae2e17196d47dee28360f58e2eb27 145 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 2.1E-13 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 M892_19580 64eae2e17196d47dee28360f58e2eb27 145 ProSitePatterns PS00552 MerR-type HTH domain signature. 6 28 - T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 M892_19580 64eae2e17196d47dee28360f58e2eb27 145 Gene3D G3DSA:1.10.1660.10 1 126 6.8E-34 T 12-10-2018 M892_19580 64eae2e17196d47dee28360f58e2eb27 145 SUPERFAMILY SSF46955 4 125 5.49E-29 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily M892_19580 64eae2e17196d47dee28360f58e2eb27 145 Pfam PF00376 MerR family regulatory protein 4 40 2.9E-13 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 M892_01965 a8395821a053e0eae8acdd9622b77865 350 SUPERFAMILY SSF81342 119 333 2.43E-46 T 12-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 M892_01965 a8395821a053e0eae8acdd9622b77865 350 Gene3D G3DSA:1.20.950.20 118 336 1.1E-65 T 12-10-2018 M892_01965 a8395821a053e0eae8acdd9622b77865 350 Pfam PF01292 Prokaryotic cytochrome b561 125 306 1.1E-25 T 12-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 M892_01965 a8395821a053e0eae8acdd9622b77865 350 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 122 326 3.0E-84 T 12-10-2018 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 M892_26855 c982bef7a682ac56ae987709e16564f9 742 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 151 221 3.4E-18 T 12-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 M892_26855 c982bef7a682ac56ae987709e16564f9 742 SUPERFAMILY SSF81296 36 118 1.42E-12 T 12-10-2018 IPR014756 Immunoglobulin E-set M892_26855 c982bef7a682ac56ae987709e16564f9 742 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 643 740 7.1E-18 T 12-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 M892_26855 c982bef7a682ac56ae987709e16564f9 742 Gene3D G3DSA:2.60.40.10 20 235 9.1E-51 T 12-10-2018 IPR013783 Immunoglobulin-like fold M892_26855 c982bef7a682ac56ae987709e16564f9 742 Gene3D G3DSA:2.60.40.1180 638 741 1.4E-30 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta M892_26855 c982bef7a682ac56ae987709e16564f9 742 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 106 741 41.179 T 12-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 M892_26855 c982bef7a682ac56ae987709e16564f9 742 PIRSF PIRSF000463 24 742 4.5E-281 T 12-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 M892_26855 c982bef7a682ac56ae987709e16564f9 742 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 131 738 4.9E-245 T 12-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 M892_26855 c982bef7a682ac56ae987709e16564f9 742 SUPERFAMILY SSF51445 188 631 4.18E-107 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily M892_26855 c982bef7a682ac56ae987709e16564f9 742 SMART SM00642 265 619 4.1E-6 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 M892_26855 c982bef7a682ac56ae987709e16564f9 742 Gene3D G3DSA:3.20.20.80 249 627 2.9E-160 T 12-10-2018 M892_26855 c982bef7a682ac56ae987709e16564f9 742 Pfam PF00128 Alpha amylase, catalytic domain 290 364 1.2E-5 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 M892_26855 c982bef7a682ac56ae987709e16564f9 742 SUPERFAMILY SSF51011 638 740 2.25E-28 T 12-10-2018 M892_08065 6248c188d743fa3ecabc4a7ba5cca9f0 748 Pfam PF05524 PEP-utilising enzyme, N-terminal 172 294 7.8E-22 T 12-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 M892_08065 6248c188d743fa3ecabc4a7ba5cca9f0 748 SUPERFAMILY SSF51621 423 714 8.9E-98 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 M892_08065 6248c188d743fa3ecabc4a7ba5cca9f0 748 Gene3D G3DSA:3.30.450.40 1 160 2.0E-39 T 12-10-2018 IPR029016 GAF-like domain superfamily M892_08065 6248c188d743fa3ecabc4a7ba5cca9f0 748 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 421 706 2.1E-96 T 12-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 M892_08065 6248c188d743fa3ecabc4a7ba5cca9f0 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 612 627 1.2E-22 T 12-10-2018 M892_08065 6248c188d743fa3ecabc4a7ba5cca9f0 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 665 677 1.2E-22 T 12-10-2018 M892_08065 6248c188d743fa3ecabc4a7ba5cca9f0 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 459 478 1.2E-22 T 12-10-2018 M892_08065 6248c188d743fa3ecabc4a7ba5cca9f0 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 629 644 1.2E-22 T 12-10-2018 M892_08065 6248c188d743fa3ecabc4a7ba5cca9f0 748 Pfam PF01590 GAF domain 17 152 9.9E-14 T 12-10-2018 IPR003018 GAF domain GO:0005515 M892_08065 6248c188d743fa3ecabc4a7ba5cca9f0 748 SUPERFAMILY SSF55781 2 158 1.18E-30 T 12-10-2018 M892_08065 6248c188d743fa3ecabc4a7ba5cca9f0 748 SMART SM00065 17 163 3.2E-18 T 12-10-2018 IPR003018 GAF domain GO:0005515 M892_08065 6248c188d743fa3ecabc4a7ba5cca9f0 748 Gene3D G3DSA:1.10.274.10 190 314 6.5E-57 T 12-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 M892_08065 6248c188d743fa3ecabc4a7ba5cca9f0 748 SUPERFAMILY SSF47831 202 311 9.68E-27 T 12-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 M892_08065 6248c188d743fa3ecabc4a7ba5cca9f0 748 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 351 362 - T 12-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 M892_08065 6248c188d743fa3ecabc4a7ba5cca9f0 748 Pfam PF00391 PEP-utilising enzyme, mobile domain 320 391 4.6E-15 T 12-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 M892_08065 6248c188d743fa3ecabc4a7ba5cca9f0 748 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 171 730 2.7E-136 T 12-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 M892_08065 6248c188d743fa3ecabc4a7ba5cca9f0 748 Gene3D G3DSA:3.20.20.60 400 739 2.9E-105 T 12-10-2018 M892_08065 6248c188d743fa3ecabc4a7ba5cca9f0 748 SUPERFAMILY SSF52009 293 412 3.4E-26 T 12-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 M892_08065 6248c188d743fa3ecabc4a7ba5cca9f0 748 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 612 630 - T 12-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 M892_08065 6248c188d743fa3ecabc4a7ba5cca9f0 748 Gene3D G3DSA:3.50.30.10 173 399 6.5E-57 T 12-10-2018 M892_23285 a325d4eb7d2ee1a72a804694a31d8746 553 SMART SM00382 46 189 1.2E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_23285 a325d4eb7d2ee1a72a804694a31d8746 553 SUPERFAMILY SSF52540 18 294 6.35E-21 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_23285 a325d4eb7d2ee1a72a804694a31d8746 553 Gene3D G3DSA:3.40.50.300 8 228 2.1E-59 T 12-10-2018 M892_23285 a325d4eb7d2ee1a72a804694a31d8746 553 Pfam PF12592 Protein of unknown function (DUF3763) 483 535 4.9E-17 T 12-10-2018 IPR022547 ATPase, RavA, C-terminal GO:0042626 M892_23285 a325d4eb7d2ee1a72a804694a31d8746 553 Pfam PF07728 AAA domain (dynein-related subfamily) 49 179 2.2E-22 T 12-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 M892_23285 a325d4eb7d2ee1a72a804694a31d8746 553 Gene3D G3DSA:1.10.8.300 229 301 1.8E-25 T 12-10-2018 M892_06100 c11a5886568e75963af4171fce443257 314 Gene3D G3DSA:3.40.190.10 165 267 6.5E-60 T 12-10-2018 M892_06100 c11a5886568e75963af4171fce443257 314 Gene3D G3DSA:3.40.190.10 94 293 6.5E-60 T 12-10-2018 M892_06100 c11a5886568e75963af4171fce443257 314 Gene3D G3DSA:1.10.10.10 5 92 8.1E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_06100 c11a5886568e75963af4171fce443257 314 Pfam PF03466 LysR substrate binding domain 90 295 2.6E-45 T 12-10-2018 IPR005119 LysR, substrate-binding M892_06100 c11a5886568e75963af4171fce443257 314 SUPERFAMILY SSF46785 8 90 1.91E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_06100 c11a5886568e75963af4171fce443257 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 7.4E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_06100 c11a5886568e75963af4171fce443257 314 SUPERFAMILY SSF53850 90 299 1.19E-46 T 12-10-2018 M892_15890 c3a2cfbc5575253e86d2db4345807d5c 332 Pfam PF04245 37-kD nucleoid-associated bacterial protein 9 326 1.7E-101 T 12-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 M892_15890 c3a2cfbc5575253e86d2db4345807d5c 332 Hamap MF_00730 Nucleoid-associated protein YejK [yejK]. 3 332 46.687 T 12-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 M892_06290 28ad110fcce1c8baa362252f4c48cafd 250 Pfam PF08907 Domain of unknown function (DUF1853) 35 206 7.7E-39 T 12-10-2018 IPR015003 Protein of unknown function DUF1853 M892_16755 8454fda042dfbc2b72263a962460ba79 414 Pfam PF12704 MacB-like periplasmic core domain 29 246 1.5E-22 T 12-10-2018 IPR025857 MacB-like periplasmic core domain M892_16755 8454fda042dfbc2b72263a962460ba79 414 Pfam PF02687 FtsX-like permease family 315 406 7.5E-14 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 M892_13080 0fecf9f76477710c7df9325ad204740f 440 Gene3D G3DSA:3.40.50.720 2 170 3.1E-66 T 12-10-2018 M892_13080 0fecf9f76477710c7df9325ad204740f 440 Gene3D G3DSA:3.90.110.10 171 439 5.5E-97 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 M892_13080 0fecf9f76477710c7df9325ad204740f 440 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 197 411 1.2E-49 T 12-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 M892_13080 0fecf9f76477710c7df9325ad204740f 440 Pfam PF02056 Family 4 glycosyl hydrolase 7 186 1.5E-61 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 M892_13080 0fecf9f76477710c7df9325ad204740f 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 99 112 2.0E-47 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 M892_13080 0fecf9f76477710c7df9325ad204740f 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 167 178 2.0E-47 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 M892_13080 0fecf9f76477710c7df9325ad204740f 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 78 94 2.0E-47 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 M892_13080 0fecf9f76477710c7df9325ad204740f 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 113 133 2.0E-47 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 M892_13080 0fecf9f76477710c7df9325ad204740f 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 142 159 2.0E-47 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 M892_13080 0fecf9f76477710c7df9325ad204740f 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 193 205 2.0E-47 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 M892_13080 0fecf9f76477710c7df9325ad204740f 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 7 22 2.0E-47 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 M892_13080 0fecf9f76477710c7df9325ad204740f 440 SUPERFAMILY SSF51735 6 170 4.44E-53 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_13080 0fecf9f76477710c7df9325ad204740f 440 SUPERFAMILY SSF56327 173 436 2.98E-91 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 M892_10415 e6891983b4d37c884d22e5365a70131d 87 Pfam PF13358 DDE superfamily endonuclease 1 55 1.6E-12 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_10415 e6891983b4d37c884d22e5365a70131d 87 Gene3D G3DSA:3.30.420.470 1 81 7.4E-10 T 12-10-2018 M892_07350 8a8c64172cbbf1c9440f2a596ebe2272 400 Pfam PF01420 Type I restriction modification DNA specificity domain 207 387 3.5E-10 T 12-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 M892_07350 8a8c64172cbbf1c9440f2a596ebe2272 400 Pfam PF01420 Type I restriction modification DNA specificity domain 18 177 1.0E-18 T 12-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 M892_07350 8a8c64172cbbf1c9440f2a596ebe2272 400 SUPERFAMILY SSF116734 195 399 2.13E-37 T 12-10-2018 M892_07350 8a8c64172cbbf1c9440f2a596ebe2272 400 SUPERFAMILY SSF116734 12 191 3.76E-34 T 12-10-2018 M892_07350 8a8c64172cbbf1c9440f2a596ebe2272 400 Gene3D G3DSA:3.90.220.20 203 399 1.1E-31 T 12-10-2018 M892_07350 8a8c64172cbbf1c9440f2a596ebe2272 400 Gene3D G3DSA:3.90.220.20 6 146 1.8E-23 T 12-10-2018 M892_10985 bd7d18754346da331dc97f4a85eb1348 234 Pfam PF01810 LysE type translocator 31 227 1.7E-36 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 M892_10985 bd7d18754346da331dc97f4a85eb1348 234 PIRSF PIRSF006324 16 229 7.1E-49 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 M892_22615 401ec93b42e743d3de3c6349da212a3a 826 SUPERFAMILY SSF53474 462 739 1.54E-9 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_22615 401ec93b42e743d3de3c6349da212a3a 826 Pfam PF12262 Bacterial virulence factor lipase N-terminal 1 275 2.5E-69 T 12-10-2018 IPR025920 Bacterial virulence factor lipase, N-terminal domain M892_22615 401ec93b42e743d3de3c6349da212a3a 826 TIGRFAM TIGR03502 lipase_Pla1_cef: extracellular lipase, Pla-1/cef family 1 805 3.8E-159 T 12-10-2018 IPR020009 Extracellular lipase, Pla-1/cef family M892_20610 141c2c9147ce5fdc98296e70c8d00c8e 664 SUPERFAMILY SSF81345 9 332 1.83E-55 T 12-10-2018 IPR037294 ABC transporter, BtuC-like M892_20610 141c2c9147ce5fdc98296e70c8d00c8e 664 SUPERFAMILY SSF81345 354 660 2.48E-61 T 12-10-2018 IPR037294 ABC transporter, BtuC-like M892_20610 141c2c9147ce5fdc98296e70c8d00c8e 664 Pfam PF01032 FecCD transport family 359 660 2.7E-68 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 M892_20610 141c2c9147ce5fdc98296e70c8d00c8e 664 Pfam PF01032 FecCD transport family 16 332 2.3E-61 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 M892_20610 141c2c9147ce5fdc98296e70c8d00c8e 664 Gene3D G3DSA:1.10.3470.10 5 338 5.0E-61 T 12-10-2018 IPR037294 ABC transporter, BtuC-like M892_20610 141c2c9147ce5fdc98296e70c8d00c8e 664 Gene3D G3DSA:1.10.3470.10 348 664 1.5E-68 T 12-10-2018 IPR037294 ABC transporter, BtuC-like M892_01450 c5eada3ea3485aa3211976909c0b255d 626 SUPERFAMILY SSF56801 3 614 1.02E-152 T 12-10-2018 M892_01450 c5eada3ea3485aa3211976909c0b255d 626 ProSitePatterns PS00455 Putative AMP-binding domain signature. 237 248 - T 12-10-2018 IPR020845 AMP-binding, conserved site M892_01450 c5eada3ea3485aa3211976909c0b255d 626 Gene3D G3DSA:3.30.300.30 497 625 1.3E-23 T 12-10-2018 M892_01450 c5eada3ea3485aa3211976909c0b255d 626 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 4 56 4.1E-12 T 12-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 M892_01450 c5eada3ea3485aa3211976909c0b255d 626 Gene3D G3DSA:3.40.50.12780 30 494 5.5E-101 T 12-10-2018 M892_01450 c5eada3ea3485aa3211976909c0b255d 626 Pfam PF13193 AMP-binding enzyme C-terminal domain 510 589 2.4E-25 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain M892_01450 c5eada3ea3485aa3211976909c0b255d 626 Pfam PF00501 AMP-binding enzyme 66 501 2.7E-81 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 M892_09240 6b12e5d3c8c91a60530c3466746d0ad5 335 Pfam PF13377 Periplasmic binding protein-like domain 168 328 2.0E-40 T 12-10-2018 M892_09240 6b12e5d3c8c91a60530c3466746d0ad5 335 SMART SM00354 1 71 2.4E-31 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M892_09240 6b12e5d3c8c91a60530c3466746d0ad5 335 Gene3D G3DSA:3.40.50.2300 160 289 3.5E-80 T 12-10-2018 M892_09240 6b12e5d3c8c91a60530c3466746d0ad5 335 Gene3D G3DSA:3.40.50.2300 56 306 3.5E-80 T 12-10-2018 M892_09240 6b12e5d3c8c91a60530c3466746d0ad5 335 Gene3D G3DSA:1.10.260.40 1 55 5.7E-26 T 12-10-2018 M892_09240 6b12e5d3c8c91a60530c3466746d0ad5 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 8.0E-20 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M892_09240 6b12e5d3c8c91a60530c3466746d0ad5 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 12-10-2018 M892_09240 6b12e5d3c8c91a60530c3466746d0ad5 335 SUPERFAMILY SSF47413 1 59 3.47E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 M892_09240 6b12e5d3c8c91a60530c3466746d0ad5 335 SUPERFAMILY SSF53822 60 334 2.55E-89 T 12-10-2018 IPR028082 Periplasmic binding protein-like I M892_17970 e75e9f4b9322f2c8fc7b8bc58df77e1f 449 PRINTS PR00131 Glycosyl hydrolase family 1 signature 391 408 5.4E-23 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 M892_17970 e75e9f4b9322f2c8fc7b8bc58df77e1f 449 PRINTS PR00131 Glycosyl hydrolase family 1 signature 415 427 5.4E-23 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 M892_17970 e75e9f4b9322f2c8fc7b8bc58df77e1f 449 PRINTS PR00131 Glycosyl hydrolase family 1 signature 370 381 5.4E-23 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 M892_17970 e75e9f4b9322f2c8fc7b8bc58df77e1f 449 PRINTS PR00131 Glycosyl hydrolase family 1 signature 350 358 5.4E-23 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 M892_17970 e75e9f4b9322f2c8fc7b8bc58df77e1f 449 PRINTS PR00131 Glycosyl hydrolase family 1 signature 289 303 5.4E-23 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 M892_17970 e75e9f4b9322f2c8fc7b8bc58df77e1f 449 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 17 31 - T 12-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site M892_17970 e75e9f4b9322f2c8fc7b8bc58df77e1f 449 Gene3D G3DSA:3.20.20.80 9 446 4.2E-160 T 12-10-2018 M892_17970 e75e9f4b9322f2c8fc7b8bc58df77e1f 449 TIGRFAM TIGR03356 BGL: beta-galactosidase 16 437 1.1E-183 T 12-10-2018 IPR017736 Glycoside hydrolase, family 1, beta-glucosidase GO:0008422|GO:0030245 KEGG: 00460+3.2.1.21|KEGG: 00500+3.2.1.21|KEGG: 00940+3.2.1.21|MetaCyc: PWY-3121|MetaCyc: PWY-5176|MetaCyc: PWY-6002|MetaCyc: PWY-6788|MetaCyc: PWY-7091|MetaCyc: PWY-7092|MetaCyc: PWY-7913 M892_17970 e75e9f4b9322f2c8fc7b8bc58df77e1f 449 SUPERFAMILY SSF51445 16 442 4.35E-154 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily M892_17970 e75e9f4b9322f2c8fc7b8bc58df77e1f 449 Pfam PF00232 Glycosyl hydrolase family 1 16 441 1.1E-148 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 M892_17970 e75e9f4b9322f2c8fc7b8bc58df77e1f 449 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 350 358 - T 12-10-2018 IPR018120 Glycoside hydrolase family 1, active site M892_01370 6bd4117934b6ab81d8fa454660734b58 71 Pfam PF05717 IS66 Orf2 like protein 9 71 4.3E-21 T 12-10-2018 IPR008878 Transposase IS66, Orf2 M892_07325 62cd8e9112c63293c8a79e747688fdad 161 TIGRFAM TIGR00086 smpB: SsrA-binding protein 15 157 9.3E-52 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 M892_07325 62cd8e9112c63293c8a79e747688fdad 161 Gene3D G3DSA:2.40.280.10 7 136 2.6E-43 T 12-10-2018 IPR023620 Small protein B M892_07325 62cd8e9112c63293c8a79e747688fdad 161 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 15 139 4.0E-60 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 M892_07325 62cd8e9112c63293c8a79e747688fdad 161 Hamap MF_00023 SsrA-binding protein [smpB]. 1 161 68.216 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 M892_07325 62cd8e9112c63293c8a79e747688fdad 161 ProSitePatterns PS01317 SsrA-binding protein. 33 45 - T 12-10-2018 IPR020081 SsrA-binding protein, conserved site M892_07325 62cd8e9112c63293c8a79e747688fdad 161 SUPERFAMILY SSF74982 8 139 1.57E-47 T 12-10-2018 IPR023620 Small protein B M892_07325 62cd8e9112c63293c8a79e747688fdad 161 Pfam PF01668 SmpB protein 15 157 4.6E-55 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 M892_25730 28be1f0b93faad9ef2edacf50f210467 328 SMART SM00587 112 269 1.7E-4 T 12-10-2018 IPR015897 CHK kinase-like M892_25730 28be1f0b93faad9ef2edacf50f210467 328 Gene3D G3DSA:3.90.1200.10 136 302 1.6E-7 T 12-10-2018 M892_25730 28be1f0b93faad9ef2edacf50f210467 328 SUPERFAMILY SSF56112 31 309 1.08E-22 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily M892_25730 28be1f0b93faad9ef2edacf50f210467 328 Pfam PF02958 Ecdysteroid kinase 76 146 2.1E-5 T 12-10-2018 IPR004119 Protein of unknown function DUF227 M892_25730 28be1f0b93faad9ef2edacf50f210467 328 Pfam PF02958 Ecdysteroid kinase 172 270 1.0E-9 T 12-10-2018 IPR004119 Protein of unknown function DUF227 M892_18085 70b3d30e4da5495824086322c4720755 194 Pfam PF01810 LysE type translocator 17 188 1.0E-15 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 M892_03240 a801a5ac100e21a5fab3a122fcafb5d6 997 SUPERFAMILY SSF57997 6 220 5.56E-5 T 12-10-2018 M892_03240 a801a5ac100e21a5fab3a122fcafb5d6 997 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 248 596 3.2E-52 T 12-10-2018 IPR010090 Phage tail tape measure protein M892_03240 a801a5ac100e21a5fab3a122fcafb5d6 997 Pfam PF10145 Phage-related minor tail protein 293 486 8.5E-25 T 12-10-2018 IPR010090 Phage tail tape measure protein M892_16400 d1a29f63b69484c7b27289e3e045f618 56 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 16.766 T 12-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_16400 d1a29f63b69484c7b27289e3e045f618 56 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 2.4E-19 T 12-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_16400 d1a29f63b69484c7b27289e3e045f618 56 Pfam PF01783 Ribosomal L32p protein family 2 56 1.5E-19 T 12-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_16400 d1a29f63b69484c7b27289e3e045f618 56 SUPERFAMILY SSF57829 2 55 1.53E-17 T 12-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 M892_04760 75b1905f92696d28b91bcab6f59a0e96 250 SUPERFAMILY SSF53098 72 235 4.17E-41 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_04760 75b1905f92696d28b91bcab6f59a0e96 250 Pfam PF13276 HTH-like domain 3 51 4.6E-7 T 12-10-2018 IPR025948 HTH-like domain M892_04760 75b1905f92696d28b91bcab6f59a0e96 250 Pfam PF00665 Integrase core domain 79 194 1.9E-32 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 M892_04760 75b1905f92696d28b91bcab6f59a0e96 250 Gene3D G3DSA:3.30.420.10 77 226 1.0E-16 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M892_05730 08276f46323cc26c4343f8a745ad8ffa 408 Pfam PF13005 zinc-finger binding domain of transposase IS66 14 58 1.2E-16 T 12-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 M892_05730 08276f46323cc26c4343f8a745ad8ffa 408 Pfam PF03050 Transposase IS66 family 78 361 1.0E-101 T 12-10-2018 IPR004291 Transposase, IS66 M892_05860 49ef1e43d05628cb9c088c94b25d757f 624 Pfam PF01553 Acyltransferase 442 567 1.4E-23 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 M892_05860 49ef1e43d05628cb9c088c94b25d757f 624 Gene3D G3DSA:1.20.1250.20 9 421 9.2E-26 T 12-10-2018 M892_05860 49ef1e43d05628cb9c088c94b25d757f 624 SMART SM00563 456 570 8.7E-36 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 M892_05860 49ef1e43d05628cb9c088c94b25d757f 624 SUPERFAMILY SSF103473 12 424 3.92E-26 T 12-10-2018 IPR036259 MFS transporter superfamily M892_05860 49ef1e43d05628cb9c088c94b25d757f 624 Pfam PF07690 Major Facilitator Superfamily 43 381 5.9E-16 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 M892_05860 49ef1e43d05628cb9c088c94b25d757f 624 SUPERFAMILY SSF69593 403 606 1.96E-29 T 12-10-2018 M892_28725 3a07ab2b70e8bdaf725b1546ca806ac2 135 Gene3D G3DSA:2.10.109.10 14 127 5.6E-32 T 12-10-2018 M892_28725 3a07ab2b70e8bdaf725b1546ca806ac2 135 Pfam PF00717 Peptidase S24-like 46 87 6.7E-8 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C M892_28725 3a07ab2b70e8bdaf725b1546ca806ac2 135 SUPERFAMILY SSF51306 21 124 4.36E-22 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily M892_20955 3af8a18602c0f7178bf2e6daea2fb3ff 352 Pfam PF09615 CRISPR-associated protein (Cas_Csy3) 3 348 2.0E-73 T 12-10-2018 IPR013399 CRISPR-associated protein Csy3 M892_20955 3af8a18602c0f7178bf2e6daea2fb3ff 352 TIGRFAM TIGR02566 cas_Csy3: CRISPR type I-F/YPEST-associated protein Csy3 2 351 1.5E-95 T 12-10-2018 IPR013399 CRISPR-associated protein Csy3 M892_10790 019038942b75f9909c20e30a97b37050 364 Gene3D G3DSA:3.10.350.10 38 85 1.7E-14 T 12-10-2018 IPR036779 LysM domain superfamily M892_10790 019038942b75f9909c20e30a97b37050 364 SMART SM00257 39 87 2.0E-4 T 12-10-2018 IPR018392 LysM domain M892_10790 019038942b75f9909c20e30a97b37050 364 Pfam PF01476 LysM domain 40 85 1.2E-12 T 12-10-2018 IPR018392 LysM domain M892_10790 019038942b75f9909c20e30a97b37050 364 SUPERFAMILY SSF54106 38 86 8.76E-7 T 12-10-2018 M892_16235 dce764b25eb8c5a35e4766dedf472e2b 306 SUPERFAMILY SSF161098 89 291 3.6E-21 T 12-10-2018 IPR035906 MetI-like superfamily M892_16235 dce764b25eb8c5a35e4766dedf472e2b 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 306 2.4E-41 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M892_16235 dce764b25eb8c5a35e4766dedf472e2b 306 Gene3D G3DSA:1.10.3720.10 84 301 1.7E-22 T 12-10-2018 IPR035906 MetI-like superfamily M892_11310 ce8e5c7ba6c0791bc1536d4ce42805ec 280 TIGRFAM TIGR04239 rhombo_GlpG: rhomboid family protease GlpG 3 271 7.9E-114 T 12-10-2018 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 M892_11310 ce8e5c7ba6c0791bc1536d4ce42805ec 280 Pfam PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease 1 87 2.6E-33 T 12-10-2018 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GO:0004252|GO:0016021 M892_11310 ce8e5c7ba6c0791bc1536d4ce42805ec 280 Gene3D G3DSA:3.30.70.2350 1 69 2.3E-25 T 12-10-2018 IPR038236 GlpG peptidase, N-terminal domain superfamily M892_11310 ce8e5c7ba6c0791bc1536d4ce42805ec 280 Gene3D G3DSA:1.20.1540.10 90 279 4.9E-52 T 12-10-2018 IPR035952 Rhomboid-like superfamily M892_11310 ce8e5c7ba6c0791bc1536d4ce42805ec 280 Pfam PF01694 Rhomboid family 134 271 1.1E-29 T 12-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 M892_11310 ce8e5c7ba6c0791bc1536d4ce42805ec 280 SUPERFAMILY SSF144091 96 271 8.76E-40 T 12-10-2018 M892_23880 86b94e1575d06e0895a1ce61765ebc0d 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 28 216 3.8E-21 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M892_23880 86b94e1575d06e0895a1ce61765ebc0d 229 SUPERFAMILY SSF161098 10 202 1.31E-37 T 12-10-2018 IPR035906 MetI-like superfamily M892_23880 86b94e1575d06e0895a1ce61765ebc0d 229 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 111 1.2E-16 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 M892_23880 86b94e1575d06e0895a1ce61765ebc0d 229 Gene3D G3DSA:1.10.3720.10 2 218 2.5E-46 T 12-10-2018 IPR035906 MetI-like superfamily M892_17885 2617f31f7703fb33e27d0efbb7ef1de3 198 SUPERFAMILY SSF48498 84 194 5.78E-17 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily M892_17885 2617f31f7703fb33e27d0efbb7ef1de3 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 1.6E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M892_17885 2617f31f7703fb33e27d0efbb7ef1de3 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 1.6E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M892_17885 2617f31f7703fb33e27d0efbb7ef1de3 198 Gene3D G3DSA:1.10.10.60 2 49 2.3E-20 T 12-10-2018 M892_17885 2617f31f7703fb33e27d0efbb7ef1de3 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 55 3.6E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M892_17885 2617f31f7703fb33e27d0efbb7ef1de3 198 Gene3D G3DSA:1.10.357.10 51 194 3.1E-18 T 12-10-2018 M892_17885 2617f31f7703fb33e27d0efbb7ef1de3 198 SUPERFAMILY SSF46689 5 73 6.8E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_03640 07b475206e03a59a58a23d6c6cf39f3f 509 Pfam PF05681 Fumarate hydratase (Fumerase) 15 289 1.2E-97 T 12-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 M892_03640 07b475206e03a59a58a23d6c6cf39f3f 509 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 16 288 2.3E-62 T 12-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 M892_03640 07b475206e03a59a58a23d6c6cf39f3f 509 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 329 492 4.2E-51 T 12-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 M892_03640 07b475206e03a59a58a23d6c6cf39f3f 509 Pfam PF05683 Fumarase C-terminus 293 494 2.1E-83 T 12-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 M892_03640 07b475206e03a59a58a23d6c6cf39f3f 509 PIRSF PIRSF001394 1 509 6.9E-216 T 12-10-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 M892_03640 07b475206e03a59a58a23d6c6cf39f3f 509 Gene3D G3DSA:3.20.130.10 309 494 1.9E-62 T 12-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 M892_03640 07b475206e03a59a58a23d6c6cf39f3f 509 SUPERFAMILY SSF117457 321 493 5.36E-64 T 12-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 M892_08475 f4ef321a0ffc0f7b41c803c013936abf 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 33.795 T 12-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid M892_08475 f4ef321a0ffc0f7b41c803c013936abf 130 Gene3D G3DSA:3.30.230.10 1 130 5.4E-54 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M892_08475 f4ef321a0ffc0f7b41c803c013936abf 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 12-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 M892_08475 f4ef321a0ffc0f7b41c803c013936abf 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 2.3E-46 T 12-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 M892_08475 f4ef321a0ffc0f7b41c803c013936abf 130 SUPERFAMILY SSF54211 5 130 2.54E-48 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold M892_21615 92f58ca41bc6adfebc45e0b6bbf665ba 246 Pfam PF08483 IstB-like ATP binding N-terminal 23 50 5.7E-10 T 12-10-2018 IPR013690 IstB-like ATP binding N-terminal M892_21615 92f58ca41bc6adfebc45e0b6bbf665ba 246 Gene3D G3DSA:3.40.50.300 61 243 3.3E-43 T 12-10-2018 M892_21615 92f58ca41bc6adfebc45e0b6bbf665ba 246 SMART SM00382 97 228 0.0061 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_21615 92f58ca41bc6adfebc45e0b6bbf665ba 246 SUPERFAMILY SSF52540 71 241 3.54E-19 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_21615 92f58ca41bc6adfebc45e0b6bbf665ba 246 PIRSF PIRSF003073 1 246 3.4E-62 T 12-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein M892_21615 92f58ca41bc6adfebc45e0b6bbf665ba 246 Pfam PF01695 IstB-like ATP binding protein 54 229 2.3E-55 T 12-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 M892_14550 c8d10a38c340f8cea369ef595665e2c4 343 Hamap MF_02122 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 2 340 45.854 T 12-10-2018 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family GO:0008666 KEGG: 00300+2.3.1.117 M892_14550 c8d10a38c340f8cea369ef595665e2c4 343 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 253 285 1.1E-11 T 12-10-2018 IPR001451 Hexapeptide repeat M892_14550 c8d10a38c340f8cea369ef595665e2c4 343 Pfam PF14789 Tetrahydrodipicolinate N-succinyltransferase middle 131 171 2.9E-16 T 12-10-2018 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117 M892_14550 c8d10a38c340f8cea369ef595665e2c4 343 TIGRFAM TIGR03536 DapD_gpp: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 4 343 4.5E-180 T 12-10-2018 IPR019876 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, gammaproteobacteria KEGG: 00300+2.3.1.117 M892_14550 c8d10a38c340f8cea369ef595665e2c4 343 Gene3D G3DSA:3.30.70.2010 1 130 1.9E-38 T 12-10-2018 M892_14550 c8d10a38c340f8cea369ef595665e2c4 343 Gene3D G3DSA:2.160.10.10 172 343 1.6E-69 T 12-10-2018 M892_14550 c8d10a38c340f8cea369ef595665e2c4 343 SUPERFAMILY SSF51161 90 324 6.24E-35 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily M892_14550 c8d10a38c340f8cea369ef595665e2c4 343 Gene3D G3DSA:3.30.60.70 131 171 1.0E-20 T 12-10-2018 IPR038361 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain superfamily KEGG: 00300+2.3.1.117 M892_03220 0d9e8abb73664b632fd9904604ef3c96 318 Pfam PF00589 Phage integrase family 105 305 1.2E-43 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 M892_03220 0d9e8abb73664b632fd9904604ef3c96 318 TIGRFAM TIGR02249 integrase_gron: integron integrase 6 308 8.3E-144 T 12-10-2018 IPR011946 Integrase, integron-type GO:0003677|GO:0006310|GO:0015074 M892_03220 0d9e8abb73664b632fd9904604ef3c96 318 Gene3D G3DSA:1.10.150.130 1 94 3.5E-28 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal M892_03220 0d9e8abb73664b632fd9904604ef3c96 318 SUPERFAMILY SSF56349 11 306 2.09E-46 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 M892_03220 0d9e8abb73664b632fd9904604ef3c96 318 Gene3D G3DSA:1.10.443.10 97 308 6.3E-68 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 M892_03220 0d9e8abb73664b632fd9904604ef3c96 318 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 8 86 1.9E-22 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 M892_00010 3fb4a3e2bcf7cd29cccec68f63eeadc6 364 Gene3D G3DSA:3.40.190.170 39 349 1.7E-116 T 12-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily M892_00010 3fb4a3e2bcf7cd29cccec68f63eeadc6 364 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 41 328 5.8E-71 T 12-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 M892_00010 3fb4a3e2bcf7cd29cccec68f63eeadc6 364 Gene3D G3DSA:3.40.190.10 157 328 1.7E-116 T 12-10-2018 M892_00010 3fb4a3e2bcf7cd29cccec68f63eeadc6 364 PIRSF PIRSF039026 4 363 1.3E-140 T 12-10-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like M892_10255 e1e50e7156099542d39ea74502ab28fb 125 SUPERFAMILY SSF103481 6 107 2.48E-15 T 12-10-2018 M892_10255 e1e50e7156099542d39ea74502ab28fb 125 Pfam PF00893 Small Multidrug Resistance protein 6 94 4.9E-21 T 12-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 M892_10255 e1e50e7156099542d39ea74502ab28fb 125 Gene3D G3DSA:1.10.3730.20 4 110 6.6E-29 T 12-10-2018 M892_08025 2402c875eae1899c67093af717976cf1 101 SMART SM00418 15 93 1.9E-28 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M892_08025 2402c875eae1899c67093af717976cf1 101 SUPERFAMILY SSF46785 9 97 1.06E-25 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_08025 2402c875eae1899c67093af717976cf1 101 Pfam PF01022 Bacterial regulatory protein, arsR family 23 67 1.3E-16 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M892_08025 2402c875eae1899c67093af717976cf1 101 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 9.5E-14 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M892_08025 2402c875eae1899c67093af717976cf1 101 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 36 47 9.5E-14 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M892_08025 2402c875eae1899c67093af717976cf1 101 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 17 32 9.5E-14 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M892_08025 2402c875eae1899c67093af717976cf1 101 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 9.5E-14 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M892_08025 2402c875eae1899c67093af717976cf1 101 Gene3D G3DSA:1.10.10.10 1 98 3.1E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_12835 506cb7f1776a58909d1d68fa06109938 320 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 289 3.1E-56 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 M892_12835 506cb7f1776a58909d1d68fa06109938 320 Gene3D G3DSA:3.40.50.720 26 317 2.4E-112 T 12-10-2018 M892_12835 506cb7f1776a58909d1d68fa06109938 320 Gene3D G3DSA:3.40.50.720 99 288 2.4E-112 T 12-10-2018 M892_12835 506cb7f1776a58909d1d68fa06109938 320 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 33 317 1.4E-23 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 M892_12835 506cb7f1776a58909d1d68fa06109938 320 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 196 218 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site M892_12835 506cb7f1776a58909d1d68fa06109938 320 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 225 241 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site M892_12835 506cb7f1776a58909d1d68fa06109938 320 SUPERFAMILY SSF52283 4 139 8.32E-33 T 12-10-2018 M892_12835 506cb7f1776a58909d1d68fa06109938 320 SUPERFAMILY SSF51735 103 290 4.46E-54 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_01490 35a42951ddf6dfc337c7f20b19b2158c 216 PIRSF PIRSF000370 1 216 5.0E-66 T 12-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 M892_01490 35a42951ddf6dfc337c7f20b19b2158c 216 Gene3D G3DSA:3.20.20.70 1 216 5.4E-50 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M892_01490 35a42951ddf6dfc337c7f20b19b2158c 216 TIGRFAM TIGR04322 rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 2 215 3.7E-109 T 12-10-2018 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 M892_01490 35a42951ddf6dfc337c7f20b19b2158c 216 Pfam PF04055 Radical SAM superfamily 20 116 1.7E-7 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 M892_01490 35a42951ddf6dfc337c7f20b19b2158c 216 SUPERFAMILY SSF102114 22 109 1.57E-5 T 12-10-2018 M892_01490 35a42951ddf6dfc337c7f20b19b2158c 216 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 1 216 32.343 T 12-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 M892_01490 35a42951ddf6dfc337c7f20b19b2158c 216 Pfam PF13394 4Fe-4S single cluster domain 17 119 7.4E-10 T 12-10-2018 M892_08140 4b69ae4a895a776adaf99c366334f65c 239 SUPERFAMILY SSF53335 33 189 2.69E-31 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M892_08140 4b69ae4a895a776adaf99c366334f65c 239 Gene3D G3DSA:3.40.50.150 7 236 1.6E-56 T 12-10-2018 M892_08140 4b69ae4a895a776adaf99c366334f65c 239 Pfam PF05175 Methyltransferase small domain 42 129 7.3E-19 T 12-10-2018 IPR007848 Methyltransferase small domain GO:0008168 M892_08140 4b69ae4a895a776adaf99c366334f65c 239 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 114 120 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 M892_08140 4b69ae4a895a776adaf99c366334f65c 239 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 9 239 54.377 T 12-10-2018 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 M892_04995 f79700d4e348766e3cddbbd14b4e72a6 290 Gene3D G3DSA:1.10.443.10 96 269 5.9E-15 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 M892_04995 f79700d4e348766e3cddbbd14b4e72a6 290 Gene3D G3DSA:1.10.150.130 2 95 2.1E-21 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal M892_04995 f79700d4e348766e3cddbbd14b4e72a6 290 Pfam PF00589 Phage integrase family 98 258 6.0E-17 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 M892_04995 f79700d4e348766e3cddbbd14b4e72a6 290 SUPERFAMILY SSF56349 6 268 2.91E-50 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 M892_10120 0780d6c3296c4ce393a305bf4e0549c0 439 SUPERFAMILY SSF56349 109 414 1.18E-18 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 M892_10120 0780d6c3296c4ce393a305bf4e0549c0 439 Gene3D G3DSA:1.10.443.10 176 422 2.2E-21 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 M892_10120 0780d6c3296c4ce393a305bf4e0549c0 439 Pfam PF00589 Phage integrase family 202 411 2.5E-11 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 M892_13820 019a8f894e461081f594a935c876c77a 256 Pfam PF01061 ABC-2 type transporter 8 218 2.3E-40 T 12-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 M892_13820 019a8f894e461081f594a935c876c77a 256 PIRSF PIRSF006648 6 253 2.6E-25 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 M892_13820 019a8f894e461081f594a935c876c77a 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 58 80 8.4E-9 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 M892_13820 019a8f894e461081f594a935c876c77a 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 102 127 8.4E-9 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 M892_13820 019a8f894e461081f594a935c876c77a 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 176 195 8.4E-9 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 M892_13820 019a8f894e461081f594a935c876c77a 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 196 215 8.4E-9 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 M892_19080 6c56fee746cd6048b5d4dd99e86d4f6c 374 Gene3D G3DSA:2.40.160.50 90 372 2.2E-9 T 12-10-2018 M892_19080 6c56fee746cd6048b5d4dd99e86d4f6c 374 Pfam PF01103 Surface antigen 91 295 2.1E-9 T 12-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 M892_06900 11472fbb857a546d6605b1290d35c13f 92 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 6 92 26.481 T 12-10-2018 IPR007454 Uncharacterised protein family UPF0250 M892_06900 11472fbb857a546d6605b1290d35c13f 92 Pfam PF04359 Protein of unknown function (DUF493) 12 92 2.3E-29 T 12-10-2018 IPR007454 Uncharacterised protein family UPF0250 M892_06900 11472fbb857a546d6605b1290d35c13f 92 Gene3D G3DSA:3.30.70.260 6 92 2.4E-33 T 12-10-2018 M892_06900 11472fbb857a546d6605b1290d35c13f 92 SUPERFAMILY SSF117991 7 92 2.62E-31 T 12-10-2018 IPR027471 YbeD-like domain superfamily M892_20445 303e40e81ae2aaba3b87024fe6a2b2d5 348 SUPERFAMILY SSF51004 30 330 3.4E-30 T 12-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily M892_20445 303e40e81ae2aaba3b87024fe6a2b2d5 348 Gene3D G3DSA:2.130.10.10 3 347 2.2E-91 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 M892_20445 303e40e81ae2aaba3b87024fe6a2b2d5 348 Pfam PF10282 Lactonase, 7-bladed beta-propeller 9 345 1.3E-93 T 12-10-2018 IPR019405 Lactonase, 7-bladed beta propeller M892_26175 898159d6589ee78f924ef258cf158183 345 Pfam PF00589 Phage integrase family 174 330 1.2E-18 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 M892_26175 898159d6589ee78f924ef258cf158183 345 SUPERFAMILY SSF56349 65 338 2.16E-38 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 M892_26175 898159d6589ee78f924ef258cf158183 345 Gene3D G3DSA:1.10.443.10 170 345 6.8E-35 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 M892_24950 56aaac26532b2a8c2780edbb7f35793f 652 Gene3D G3DSA:1.20.1530.20 2 399 4.4E-77 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily M892_24950 56aaac26532b2a8c2780edbb7f35793f 652 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 12 303 2.3E-74 T 12-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 M892_24950 56aaac26532b2a8c2780edbb7f35793f 652 Pfam PF00999 Sodium/hydrogen exchanger family 10 390 1.8E-57 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 M892_24950 56aaac26532b2a8c2780edbb7f35793f 652 SUPERFAMILY SSF51735 419 559 1.24E-32 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_24950 56aaac26532b2a8c2780edbb7f35793f 652 Pfam PF02254 TrkA-N domain 422 534 2.5E-24 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 M892_24950 56aaac26532b2a8c2780edbb7f35793f 652 Gene3D G3DSA:3.40.50.720 419 579 8.6E-35 T 12-10-2018 M892_24415 653d2a9b22556b0e28df167e5fdef939 218 Gene3D G3DSA:3.30.1330.60 78 217 2.2E-30 T 12-10-2018 IPR036737 OmpA-like domain superfamily M892_24415 653d2a9b22556b0e28df167e5fdef939 218 Pfam PF00691 OmpA family 114 208 4.7E-16 T 12-10-2018 IPR006665 OmpA-like domain M892_24415 653d2a9b22556b0e28df167e5fdef939 218 SUPERFAMILY SSF103088 101 214 1.83E-29 T 12-10-2018 IPR036737 OmpA-like domain superfamily M892_24415 653d2a9b22556b0e28df167e5fdef939 218 PRINTS PR01021 OMPA domain signature 114 136 3.7E-8 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M892_24415 653d2a9b22556b0e28df167e5fdef939 218 PRINTS PR01021 OMPA domain signature 144 159 3.7E-8 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M892_24415 653d2a9b22556b0e28df167e5fdef939 218 PRINTS PR01021 OMPA domain signature 159 175 3.7E-8 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M892_07285 45dc5a834730d86b3a82e1626b696948 294 Pfam PF01513 ATP-NAD kinase 8 273 2.7E-70 T 12-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 M892_07285 45dc5a834730d86b3a82e1626b696948 294 Gene3D G3DSA:3.40.50.10330 23 289 1.3E-93 T 12-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 M892_07285 45dc5a834730d86b3a82e1626b696948 294 SUPERFAMILY SSF111331 8 290 1.15E-93 T 12-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily M892_07285 45dc5a834730d86b3a82e1626b696948 294 Gene3D G3DSA:2.60.200.30 129 266 1.3E-93 T 12-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 M892_07285 45dc5a834730d86b3a82e1626b696948 294 Hamap MF_00361 NAD kinase [nadK]. 6 289 34.248 T 12-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 M892_13560 84478de520e13c85d4054d4cf84fd9d1 65 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 58 4.4E-30 T 12-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 M892_13560 84478de520e13c85d4054d4cf84fd9d1 65 Gene3D G3DSA:3.30.70.1680 1 59 8.5E-30 T 12-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 M892_13560 84478de520e13c85d4054d4cf84fd9d1 65 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 4.0E-20 T 12-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 M892_13560 84478de520e13c85d4054d4cf84fd9d1 65 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 63 17.074 T 12-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 M892_13560 84478de520e13c85d4054d4cf84fd9d1 65 SUPERFAMILY SSF117130 1 54 6.93E-21 T 12-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 M892_13560 84478de520e13c85d4054d4cf84fd9d1 65 Pfam PF02599 Global regulator protein family 1 52 2.0E-26 T 12-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 M892_23180 14526388817e03902a7926bb4f82c775 62 Pfam PF11661 Protein of unknown function (DUF2986) 1 43 7.8E-21 T 12-10-2018 IPR021677 Protein of unknown function DUF2986 M892_02950 9dda1bfafcf240a4622a35783c502738 249 Pfam PF03496 ADP-ribosyltransferase exoenzyme 48 208 3.1E-13 T 12-10-2018 IPR003540 ADP ribosyltransferase GO:0005576|GO:0009405 M892_02950 9dda1bfafcf240a4622a35783c502738 249 SUPERFAMILY SSF56399 32 207 2.24E-40 T 12-10-2018 M892_02950 9dda1bfafcf240a4622a35783c502738 249 Gene3D G3DSA:3.90.176.10 18 212 1.4E-36 T 12-10-2018 M892_15370 4773e2aeb951df70358f45f6b278d7e7 389 SMART SM00260 242 376 4.2E-4 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 M892_15370 4773e2aeb951df70358f45f6b278d7e7 389 SUPERFAMILY SSF50341 243 379 4.97E-15 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 M892_15370 4773e2aeb951df70358f45f6b278d7e7 389 PIRSF PIRSF020479 5 389 1.9E-139 T 12-10-2018 IPR014506 Uncharacterised conserved protein UCP020479, signal transduction CheW-like M892_15370 4773e2aeb951df70358f45f6b278d7e7 389 Pfam PF01584 CheW-like domain 246 378 1.8E-15 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 M892_09305 8cab053501c70e01106c6cfad6ee03aa 256 Pfam PF00121 Triosephosphate isomerase 5 247 1.8E-87 T 12-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_09305 8cab053501c70e01106c6cfad6ee03aa 256 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 241 1.8E-77 T 12-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_09305 8cab053501c70e01106c6cfad6ee03aa 256 SUPERFAMILY SSF51351 2 250 1.06E-88 T 12-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_09305 8cab053501c70e01106c6cfad6ee03aa 256 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 250 59.194 T 12-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_09305 8cab053501c70e01106c6cfad6ee03aa 256 Gene3D G3DSA:3.20.20.70 1 256 1.1E-99 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M892_09305 8cab053501c70e01106c6cfad6ee03aa 256 ProSitePatterns PS00171 Triosephosphate isomerase active site. 167 177 - T 12-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M892_02910 449449700afb1514edf4734a7fa1276c 416 Pfam PF01979 Amidohydrolase family 70 408 2.2E-16 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 M892_02910 449449700afb1514edf4734a7fa1276c 416 Gene3D G3DSA:2.30.40.10 7 408 1.5E-157 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 M892_02910 449449700afb1514edf4734a7fa1276c 416 Hamap MF_00372 Imidazolonepropionase [hutI]. 2 411 41.282 T 12-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 M892_02910 449449700afb1514edf4734a7fa1276c 416 SUPERFAMILY SSF51556 72 370 1.9E-82 T 12-10-2018 IPR032466 Metal-dependent hydrolase M892_02910 449449700afb1514edf4734a7fa1276c 416 TIGRFAM TIGR01224 hutI: imidazolonepropionase 30 409 6.9E-150 T 12-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 M892_02910 449449700afb1514edf4734a7fa1276c 416 SUPERFAMILY SSF51338 1 412 9.61E-23 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 M892_02910 449449700afb1514edf4734a7fa1276c 416 Gene3D G3DSA:3.20.20.140 73 371 1.5E-157 T 12-10-2018 M892_03330 a3d43fbdae2456859fa16f3877474727 450 Gene3D G3DSA:3.40.1750.20 184 250 5.9E-37 T 12-10-2018 M892_03330 a3d43fbdae2456859fa16f3877474727 450 Pfam PF01343 Peptidase family S49 144 290 5.1E-31 T 12-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 M892_03330 a3d43fbdae2456859fa16f3877474727 450 SUPERFAMILY SSF52096 66 279 9.45E-26 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily M892_03330 a3d43fbdae2456859fa16f3877474727 450 Gene3D G3DSA:3.90.226.10 78 285 5.9E-37 T 12-10-2018 M892_00095 6e353fb17579d575aed96eb6e49a52cb 347 SUPERFAMILY SSF53098 221 318 1.82E-7 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_00095 6e353fb17579d575aed96eb6e49a52cb 347 Gene3D G3DSA:3.30.420.470 136 340 1.0E-11 T 12-10-2018 M892_00095 6e353fb17579d575aed96eb6e49a52cb 347 Pfam PF13358 DDE superfamily endonuclease 169 312 3.9E-32 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_00095 6e353fb17579d575aed96eb6e49a52cb 347 SUPERFAMILY SSF46689 16 131 3.88E-25 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_00095 6e353fb17579d575aed96eb6e49a52cb 347 Pfam PF13592 Winged helix-turn helix 98 155 7.3E-20 T 12-10-2018 IPR025959 Winged helix-turn helix domain M892_00095 6e353fb17579d575aed96eb6e49a52cb 347 Pfam PF13551 Winged helix-turn helix 32 87 2.3E-8 T 12-10-2018 M892_04200 c5ce264c4ae52aa6cba8ae18db0c814e 398 Gene3D G3DSA:3.40.50.150 104 242 4.5E-5 T 12-10-2018 M892_04200 c5ce264c4ae52aa6cba8ae18db0c814e 398 SUPERFAMILY SSF53335 115 185 1.56E-5 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M892_04200 c5ce264c4ae52aa6cba8ae18db0c814e 398 Pfam PF13679 Methyltransferase domain 107 230 3.2E-18 T 12-10-2018 IPR025714 Methyltransferase domain M892_26040 b44826c8ea238a6b63c888267c20c536 373 Pfam PF10758 Protein of unknown function (DUF2586) 4 364 2.6E-152 T 12-10-2018 IPR019694 Bacteriophage HP1, Orf23 M892_02005 f6a38ec841bbce64b5d96670cc8e0584 276 Pfam PF02634 FdhD/NarQ family 37 268 9.7E-74 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 M892_02005 f6a38ec841bbce64b5d96670cc8e0584 276 SUPERFAMILY SSF53927 17 268 4.21E-71 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 M892_02005 f6a38ec841bbce64b5d96670cc8e0584 276 Gene3D G3DSA:3.40.140.10 124 275 1.5E-42 T 12-10-2018 M892_02005 f6a38ec841bbce64b5d96670cc8e0584 276 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 13 269 26.22 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 M892_02005 f6a38ec841bbce64b5d96670cc8e0584 276 PIRSF PIRSF015626 1 273 3.2E-99 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 M892_02005 f6a38ec841bbce64b5d96670cc8e0584 276 Gene3D G3DSA:3.10.20.10 38 121 2.4E-10 T 12-10-2018 M892_06680 7cc37ebee3f1d68a32eca64b9557b82d 230 Gene3D G3DSA:2.40.160.40 36 230 2.4E-12 T 12-10-2018 M892_06680 7cc37ebee3f1d68a32eca64b9557b82d 230 Pfam PF06178 Oligogalacturonate-specific porin protein (KdgM) 46 180 2.1E-5 T 12-10-2018 IPR009331 Oligogalacturonate-specific porin M892_00690 6d8040bdb42529976541ac7a305426f2 334 Gene3D G3DSA:2.60.120.10 46 144 7.6E-11 T 12-10-2018 IPR014710 RmlC-like jelly roll fold M892_00690 6d8040bdb42529976541ac7a305426f2 334 Gene3D G3DSA:2.60.120.10 196 329 2.1E-7 T 12-10-2018 IPR014710 RmlC-like jelly roll fold M892_00690 6d8040bdb42529976541ac7a305426f2 334 SUPERFAMILY SSF51182 12 328 1.59E-23 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily M892_25540 4363160e1a74484ea84a723f1eacc3eb 334 SUPERFAMILY SSF53300 94 293 3.71E-39 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily M892_25540 4363160e1a74484ea84a723f1eacc3eb 334 SMART SM00327 96 297 1.7E-20 T 12-10-2018 IPR002035 von Willebrand factor, type A M892_25540 4363160e1a74484ea84a723f1eacc3eb 334 Pfam PF00092 von Willebrand factor type A domain 98 290 5.1E-32 T 12-10-2018 IPR002035 von Willebrand factor, type A M892_25540 4363160e1a74484ea84a723f1eacc3eb 334 Gene3D G3DSA:3.40.50.410 96 297 1.1E-60 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily M892_26665 4c15ae324fc7143f59344cd57f686dce 423 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 15 422 34.898 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 M892_26665 4c15ae324fc7143f59344cd57f686dce 423 PRINTS PR00447 Natural resistance-associated macrophage protein signature 312 331 2.1E-31 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 M892_26665 4c15ae324fc7143f59344cd57f686dce 423 PRINTS PR00447 Natural resistance-associated macrophage protein signature 163 184 2.1E-31 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 M892_26665 4c15ae324fc7143f59344cd57f686dce 423 PRINTS PR00447 Natural resistance-associated macrophage protein signature 213 236 2.1E-31 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 M892_26665 4c15ae324fc7143f59344cd57f686dce 423 PRINTS PR00447 Natural resistance-associated macrophage protein signature 138 157 2.1E-31 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 M892_26665 4c15ae324fc7143f59344cd57f686dce 423 PRINTS PR00447 Natural resistance-associated macrophage protein signature 110 136 2.1E-31 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 M892_26665 4c15ae324fc7143f59344cd57f686dce 423 Pfam PF01566 Natural resistance-associated macrophage protein 50 397 1.1E-121 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 M892_26665 4c15ae324fc7143f59344cd57f686dce 423 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 31 390 9.1E-97 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 M892_21580 268b4cad66505f7be1f318cfa953ac6e 418 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 73 85 2.0E-6 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 M892_21580 268b4cad66505f7be1f318cfa953ac6e 418 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 265 284 2.0E-6 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 M892_21580 268b4cad66505f7be1f318cfa953ac6e 418 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 52 70 2.0E-6 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 M892_21580 268b4cad66505f7be1f318cfa953ac6e 418 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 47 274 6.9E-21 T 12-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 M892_21580 268b4cad66505f7be1f318cfa953ac6e 418 SUPERFAMILY SSF50621 251 399 2.3E-13 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 M892_21580 268b4cad66505f7be1f318cfa953ac6e 418 SUPERFAMILY SSF51419 20 276 2.49E-34 T 12-10-2018 IPR029066 PLP-binding barrel M892_21580 268b4cad66505f7be1f318cfa953ac6e 418 Gene3D G3DSA:2.40.37.10 16 400 1.1E-42 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 M892_21580 268b4cad66505f7be1f318cfa953ac6e 418 Gene3D G3DSA:3.20.20.10 27 277 1.1E-42 T 12-10-2018 IPR029066 PLP-binding barrel M892_27215 811e4a974e0b114472fa240eb2009179 522 Gene3D G3DSA:3.50.50.60 213 510 1.4E-104 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_27215 811e4a974e0b114472fa240eb2009179 522 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 213 502 7.2E-41 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 M892_27215 811e4a974e0b114472fa240eb2009179 522 PIRSF PIRSF000238 1 522 5.6E-254 T 12-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 M892_27215 811e4a974e0b114472fa240eb2009179 522 SUPERFAMILY SSF51905 203 516 9.88E-49 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_27215 811e4a974e0b114472fa240eb2009179 522 SUPERFAMILY SSF52833 1 101 1.04E-26 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M892_27215 811e4a974e0b114472fa240eb2009179 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 317 325 7.9E-60 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 M892_27215 811e4a974e0b114472fa240eb2009179 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 354 378 7.9E-60 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 M892_27215 811e4a974e0b114472fa240eb2009179 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 480 498 7.9E-60 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 M892_27215 811e4a974e0b114472fa240eb2009179 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 214 236 7.9E-60 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 M892_27215 811e4a974e0b114472fa240eb2009179 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 339 351 7.9E-60 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 M892_27215 811e4a974e0b114472fa240eb2009179 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 445 466 7.9E-60 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 M892_27215 811e4a974e0b114472fa240eb2009179 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 246 261 7.9E-60 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 M892_27215 811e4a974e0b114472fa240eb2009179 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 266 276 7.9E-60 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 M892_27215 811e4a974e0b114472fa240eb2009179 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 406 422 7.9E-60 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 M892_27215 811e4a974e0b114472fa240eb2009179 522 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 520 1.2E-246 T 12-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 M892_27215 811e4a974e0b114472fa240eb2009179 522 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 346 366 - T 12-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 M892_27215 811e4a974e0b114472fa240eb2009179 522 SUPERFAMILY SSF52833 104 197 4.05E-24 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M892_27215 811e4a974e0b114472fa240eb2009179 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 470 492 6.0E-35 T 12-10-2018 M892_27215 811e4a974e0b114472fa240eb2009179 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 215 234 6.0E-35 T 12-10-2018 M892_27215 811e4a974e0b114472fa240eb2009179 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 316 334 6.0E-35 T 12-10-2018 M892_27215 811e4a974e0b114472fa240eb2009179 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 443 459 6.0E-35 T 12-10-2018 M892_27215 811e4a974e0b114472fa240eb2009179 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 358 376 6.0E-35 T 12-10-2018 M892_27215 811e4a974e0b114472fa240eb2009179 522 Pfam PF13192 Thioredoxin domain 121 194 1.1E-11 T 12-10-2018 IPR012336 Thioredoxin-like fold M892_27215 811e4a974e0b114472fa240eb2009179 522 Gene3D G3DSA:3.40.30.80 1 200 1.6E-64 T 12-10-2018 M892_27215 811e4a974e0b114472fa240eb2009179 522 Gene3D G3DSA:3.50.50.60 328 451 1.4E-104 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_07970 a49d255d1cc92d13fbf82fd2864ca23c 113 Pfam PF10973 Protein of unknown function (DUF2799) 28 108 3.3E-22 T 12-10-2018 IPR021242 Protein of unknown function DUF2799 M892_08875 f1ab1c0fb40571a7a2fd561d8f8dc09a 323 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 12-10-2018 IPR033749 Polyprenyl synthetase, conserved site M892_08875 f1ab1c0fb40571a7a2fd561d8f8dc09a 323 SUPERFAMILY SSF48576 4 322 6.66E-99 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily M892_08875 f1ab1c0fb40571a7a2fd561d8f8dc09a 323 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 12-10-2018 IPR033749 Polyprenyl synthetase, conserved site M892_08875 f1ab1c0fb40571a7a2fd561d8f8dc09a 323 Gene3D G3DSA:1.10.600.10 1 323 3.1E-119 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily M892_08875 f1ab1c0fb40571a7a2fd561d8f8dc09a 323 Pfam PF00348 Polyprenyl synthetase 32 271 9.4E-74 T 12-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 M892_01720 77011f45685e33f48c2f29290eff4fcb 171 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 4 171 1.8E-89 T 12-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 M892_01720 77011f45685e33f48c2f29290eff4fcb 171 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 2 171 49.368 T 12-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 M892_01720 77011f45685e33f48c2f29290eff4fcb 171 Pfam PF07977 FabA-like domain 28 157 3.3E-54 T 12-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 M892_01720 77011f45685e33f48c2f29290eff4fcb 171 Gene3D G3DSA:3.10.129.10 2 171 2.3E-62 T 12-10-2018 M892_01720 77011f45685e33f48c2f29290eff4fcb 171 SUPERFAMILY SSF54637 4 168 2.78E-53 T 12-10-2018 IPR029069 HotDog domain superfamily M892_09585 f7565a9d005643332a8e0cfc53baa87d 399 Gene3D G3DSA:3.40.50.1950 1 184 2.2E-55 T 12-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 M892_09585 f7565a9d005643332a8e0cfc53baa87d 399 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 187 371 1.9E-77 T 12-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 M892_09585 f7565a9d005643332a8e0cfc53baa87d 399 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 4 395 4.9E-153 T 12-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 M892_09585 f7565a9d005643332a8e0cfc53baa87d 399 Pfam PF02441 Flavoprotein 7 178 3.6E-43 T 12-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 M892_09585 f7565a9d005643332a8e0cfc53baa87d 399 Gene3D G3DSA:3.40.50.10300 185 399 1.1E-84 T 12-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 M892_09585 f7565a9d005643332a8e0cfc53baa87d 399 SUPERFAMILY SSF52507 1 181 1.83E-60 T 12-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 M892_09585 f7565a9d005643332a8e0cfc53baa87d 399 SUPERFAMILY SSF102645 184 398 9.94E-82 T 12-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 M892_10795 3b637f9a0850f5526f83bd9b90a93614 369 Pfam PF02481 DNA recombination-mediator protein A 76 280 4.0E-77 T 12-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 M892_10795 3b637f9a0850f5526f83bd9b90a93614 369 Gene3D G3DSA:1.10.10.10 305 364 8.9E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_10795 3b637f9a0850f5526f83bd9b90a93614 369 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 76 288 1.1E-77 T 12-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 M892_10795 3b637f9a0850f5526f83bd9b90a93614 369 SUPERFAMILY SSF102405 83 290 9.16E-43 T 12-10-2018 M892_10795 3b637f9a0850f5526f83bd9b90a93614 369 Gene3D G3DSA:3.40.50.450 2 293 1.2E-95 T 12-10-2018 M892_22490 f09b72272f0e5b2d45f9d487c6771a6b 179 Pfam PF13689 Domain of unknown function (DUF4154) 34 170 3.2E-22 T 12-10-2018 IPR025293 YfiR-like M892_14570 92442258d01f0962068a2461bfbbe7b7 99 Gene3D G3DSA:1.10.10.710 21 97 1.3E-7 T 12-10-2018 IPR038627 YebG-like superfamily M892_14570 92442258d01f0962068a2461bfbbe7b7 99 Pfam PF07130 YebG protein 1 72 1.3E-31 T 12-10-2018 IPR009813 Uncharacterised protein family YebG M892_21965 6ac04e12edf1cafb2a03824fbbada112 431 PIRSF PIRSF000412 4 431 5.1E-167 T 12-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 M892_21965 6ac04e12edf1cafb2a03824fbbada112 431 Pfam PF00464 Serine hydroxymethyltransferase 19 395 1.7E-174 T 12-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 M892_21965 6ac04e12edf1cafb2a03824fbbada112 431 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 232 248 - T 12-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 M892_21965 6ac04e12edf1cafb2a03824fbbada112 431 SUPERFAMILY SSF53383 9 430 6.4E-181 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M892_21965 6ac04e12edf1cafb2a03824fbbada112 431 Gene3D G3DSA:3.90.1150.10 21 403 1.1E-185 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M892_21965 6ac04e12edf1cafb2a03824fbbada112 431 Gene3D G3DSA:3.40.640.10 47 298 1.1E-185 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M892_21965 6ac04e12edf1cafb2a03824fbbada112 431 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 17 431 52.968 T 12-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 M892_19840 4a51482232ef5f8e69c110762ae12bc8 125 SUPERFAMILY SSF142906 1 118 9.94E-30 T 12-10-2018 IPR038056 YjbR-like superfamily M892_19840 4a51482232ef5f8e69c110762ae12bc8 125 Gene3D G3DSA:3.90.1150.30 1 120 5.6E-13 T 12-10-2018 IPR038056 YjbR-like superfamily M892_19840 4a51482232ef5f8e69c110762ae12bc8 125 Pfam PF04237 YjbR 12 103 1.6E-13 T 12-10-2018 IPR007351 Uncharacterised protein YjbR M892_16910 2ed66203c2116e4c0c703b88316876d1 180 Pfam PF00857 Isochorismatase family 7 156 7.0E-31 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 M892_16910 2ed66203c2116e4c0c703b88316876d1 180 SUPERFAMILY SSF52499 1 180 2.88E-46 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 M892_16910 2ed66203c2116e4c0c703b88316876d1 180 Gene3D G3DSA:3.40.50.850 1 180 2.3E-48 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 M892_03820 c1ed1cf694bf3c518536e330a8a3685b 223 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 219 2.1E-94 T 12-10-2018 IPR014319 Phage shock protein, PspA M892_03820 c1ed1cf694bf3c518536e330a8a3685b 223 Pfam PF04012 PspA/IM30 family 2 217 5.2E-61 T 12-10-2018 IPR007157 PspA/IM30 M892_06350 200813fba1d3d9010d94c5b5f8d803f6 404 Gene3D G3DSA:1.10.10.10 3 79 3.9E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_06350 200813fba1d3d9010d94c5b5f8d803f6 404 Gene3D G3DSA:3.30.420.40 90 384 1.1E-92 T 12-10-2018 M892_06350 200813fba1d3d9010d94c5b5f8d803f6 404 SUPERFAMILY SSF53067 85 391 5.94E-55 T 12-10-2018 M892_06350 200813fba1d3d9010d94c5b5f8d803f6 404 Gene3D G3DSA:3.30.420.40 207 376 1.1E-92 T 12-10-2018 M892_06350 200813fba1d3d9010d94c5b5f8d803f6 404 SUPERFAMILY SSF46785 11 75 6.07E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_06350 200813fba1d3d9010d94c5b5f8d803f6 404 Pfam PF00480 ROK family 86 390 1.6E-75 T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 M892_06350 200813fba1d3d9010d94c5b5f8d803f6 404 ProSitePatterns PS01125 ROK family signature. 217 244 - T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 M892_10230 28466b7c5ff6e6a0917f593adc00e08e 458 PIRSF PIRSF002746 9 458 1.8E-145 T 12-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 M892_10230 28466b7c5ff6e6a0917f593adc00e08e 458 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 14 458 1.1E-108 T 12-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 M892_10230 28466b7c5ff6e6a0917f593adc00e08e 458 Pfam PF02447 GntP family permease 14 456 2.2E-119 T 12-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 M892_16750 4ccc445b65ff94fedfc1cc9aa338ac62 423 SUPERFAMILY SSF56954 4 412 9.16E-78 T 12-10-2018 M892_16750 4ccc445b65ff94fedfc1cc9aa338ac62 423 Gene3D G3DSA:1.20.1600.10 26 423 2.3E-78 T 12-10-2018 M892_16750 4ccc445b65ff94fedfc1cc9aa338ac62 423 Pfam PF02321 Outer membrane efflux protein 28 204 2.7E-25 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 M892_16750 4ccc445b65ff94fedfc1cc9aa338ac62 423 Pfam PF02321 Outer membrane efflux protein 229 407 8.1E-28 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 M892_26720 768f572a3ea080382223af5e5bfbb99f 183 Pfam PF13505 Outer membrane protein beta-barrel domain 7 183 6.6E-13 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel M892_26720 768f572a3ea080382223af5e5bfbb99f 183 Gene3D G3DSA:2.40.160.20 21 183 3.7E-16 T 12-10-2018 M892_26720 768f572a3ea080382223af5e5bfbb99f 183 SUPERFAMILY SSF56925 21 183 3.14E-16 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel M892_03310 ae037b7ef537b9d79f5c36c58d9b0598 122 ProDom PD031229 PROPHAGE HEAD-TAIL JOINING CAPSID TAIL ATTACHMENT MINOR GIFSY-1 FII CP-933X 2 43 0.006 T 12-10-2018 IPR008018 Bacteriophage tail attachment protein FII GO:0019068 M892_18665 065b054426d48f6fe999e54d5040e169 230 Pfam PF08388 Group II intron, maturase-specific domain 88 156 2.2E-14 T 12-10-2018 IPR013597 Group II intron, maturase-specific M892_13660 138db3a8a0779aebe2e0903b31c7d85a 522 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 522 222.287 T 12-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 M892_13660 138db3a8a0779aebe2e0903b31c7d85a 522 Gene3D G3DSA:3.30.590.20 17 522 9.2E-192 T 12-10-2018 M892_13660 138db3a8a0779aebe2e0903b31c7d85a 522 SUPERFAMILY SSF55931 5 513 9.16E-201 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 M892_13660 138db3a8a0779aebe2e0903b31c7d85a 522 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 8 515 2.4E-207 T 12-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 M892_13660 138db3a8a0779aebe2e0903b31c7d85a 522 Pfam PF04262 Glutamate-cysteine ligase 13 378 2.5E-167 T 12-10-2018 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 M892_27140 809ffce673ea6c3c2fe8dfe1779bc826 222 Pfam PF02525 Flavodoxin-like fold 1 208 1.2E-56 T 12-10-2018 IPR003680 Flavodoxin-like fold M892_27140 809ffce673ea6c3c2fe8dfe1779bc826 222 Gene3D G3DSA:3.40.50.360 1 221 1.2E-74 T 12-10-2018 IPR029039 Flavoprotein-like superfamily M892_27140 809ffce673ea6c3c2fe8dfe1779bc826 222 SUPERFAMILY SSF52218 1 214 8.55E-64 T 12-10-2018 IPR029039 Flavoprotein-like superfamily M892_15245 01571f13909ef3d825a901a05bfa4280 103 Pfam PF02049 Flagellar hook-basal body complex protein FliE 18 103 3.0E-28 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 M892_15245 01571f13909ef3d825a901a05bfa4280 103 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 17 102 8.4E-18 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 M892_15245 01571f13909ef3d825a901a05bfa4280 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 88 101 6.4E-12 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 M892_15245 01571f13909ef3d825a901a05bfa4280 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 32 48 6.4E-12 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 M892_15245 01571f13909ef3d825a901a05bfa4280 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 67 83 6.4E-12 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 M892_15245 01571f13909ef3d825a901a05bfa4280 103 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 1 103 16.392 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 M892_00925 d583d7a9882af6c3179919181e1bc225 194 Pfam PF02525 Flavodoxin-like fold 3 189 7.3E-42 T 12-10-2018 IPR003680 Flavodoxin-like fold M892_00925 d583d7a9882af6c3179919181e1bc225 194 SUPERFAMILY SSF52218 1 193 4.84E-50 T 12-10-2018 IPR029039 Flavoprotein-like superfamily M892_00925 d583d7a9882af6c3179919181e1bc225 194 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 194 30.971 T 12-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 M892_00925 d583d7a9882af6c3179919181e1bc225 194 Gene3D G3DSA:3.40.50.360 1 194 1.7E-53 T 12-10-2018 IPR029039 Flavoprotein-like superfamily M892_24740 814de744861e65e4a7a94f512f292cf9 448 SUPERFAMILY SSF54631 140 272 2.4E-13 T 12-10-2018 M892_24740 814de744861e65e4a7a94f512f292cf9 448 Gene3D G3DSA:1.10.357.20 274 447 1.5E-45 T 12-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain M892_24740 814de744861e65e4a7a94f512f292cf9 448 SUPERFAMILY SSF161093 276 446 1.16E-45 T 12-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 M892_24740 814de744861e65e4a7a94f512f292cf9 448 Pfam PF01769 Divalent cation transporter 319 440 3.8E-22 T 12-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 M892_24740 814de744861e65e4a7a94f512f292cf9 448 Pfam PF03448 MgtE intracellular N domain 35 135 1.1E-14 T 12-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain M892_24740 814de744861e65e4a7a94f512f292cf9 448 SMART SM00924 34 137 4.5E-13 T 12-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain M892_24740 814de744861e65e4a7a94f512f292cf9 448 Gene3D G3DSA:3.10.580.10 133 258 3.5E-33 T 12-10-2018 M892_24740 814de744861e65e4a7a94f512f292cf9 448 SUPERFAMILY SSF158791 33 134 1.96E-14 T 12-10-2018 M892_20370 ecfa8196b183c7d694108966b7e88b93 366 Pfam PF12698 ABC-2 family transporter protein 25 357 4.3E-45 T 12-10-2018 M892_20370 ecfa8196b183c7d694108966b7e88b93 366 PRINTS PR00164 ABC-2 type transport system membrane protein signature 251 275 1.3E-6 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 M892_20370 ecfa8196b183c7d694108966b7e88b93 366 PRINTS PR00164 ABC-2 type transport system membrane protein signature 288 307 1.3E-6 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 M892_20370 ecfa8196b183c7d694108966b7e88b93 366 PRINTS PR00164 ABC-2 type transport system membrane protein signature 308 327 1.3E-6 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 M892_20540 bfbe6c216f0cc5753cd39d39846a140c 385 Pfam PF03222 Tryptophan/tyrosine permease family 4 381 4.7E-77 T 12-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 M892_20540 bfbe6c216f0cc5753cd39d39846a140c 385 PRINTS PR00166 Aromatic amino acid permease signature 306 324 1.0E-35 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 M892_20540 bfbe6c216f0cc5753cd39d39846a140c 385 PRINTS PR00166 Aromatic amino acid permease signature 82 102 1.0E-35 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 M892_20540 bfbe6c216f0cc5753cd39d39846a140c 385 PRINTS PR00166 Aromatic amino acid permease signature 182 204 1.0E-35 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 M892_20540 bfbe6c216f0cc5753cd39d39846a140c 385 PRINTS PR00166 Aromatic amino acid permease signature 327 346 1.0E-35 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 M892_20540 bfbe6c216f0cc5753cd39d39846a140c 385 PRINTS PR00166 Aromatic amino acid permease signature 37 56 1.0E-35 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 M892_20540 bfbe6c216f0cc5753cd39d39846a140c 385 PRINTS PR00166 Aromatic amino acid permease signature 10 33 1.0E-35 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 M892_20540 bfbe6c216f0cc5753cd39d39846a140c 385 PRINTS PR00166 Aromatic amino acid permease signature 147 167 1.0E-35 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 M892_24065 f0cbdc973995b0a2e262a17421cf6d68 403 Gene3D G3DSA:3.40.47.10 7 273 2.4E-133 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M892_24065 f0cbdc973995b0a2e262a17421cf6d68 403 SUPERFAMILY SSF53901 4 267 9.27E-75 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M892_24065 f0cbdc973995b0a2e262a17421cf6d68 403 Gene3D G3DSA:3.40.47.10 125 397 2.4E-133 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M892_24065 f0cbdc973995b0a2e262a17421cf6d68 403 Pfam PF00108 Thiolase, N-terminal domain 6 259 6.4E-81 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 M892_24065 f0cbdc973995b0a2e262a17421cf6d68 403 SUPERFAMILY SSF53901 268 400 2.06E-33 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M892_24065 f0cbdc973995b0a2e262a17421cf6d68 403 ProSitePatterns PS00099 Thiolases active site. 383 396 - T 12-10-2018 IPR020610 Thiolase, active site GO:0016747 M892_24065 f0cbdc973995b0a2e262a17421cf6d68 403 Pfam PF02803 Thiolase, C-terminal domain 268 400 1.7E-35 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 M892_24065 f0cbdc973995b0a2e262a17421cf6d68 403 PIRSF PIRSF000429 1 402 1.1E-104 T 12-10-2018 IPR002155 Thiolase GO:0016747 M892_24065 f0cbdc973995b0a2e262a17421cf6d68 403 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 83 101 - T 12-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 M892_24065 f0cbdc973995b0a2e262a17421cf6d68 403 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 399 1.1E-120 T 12-10-2018 IPR002155 Thiolase GO:0016747 M892_14670 945f8fec1300c905198320d8ec6da387 273 SUPERFAMILY SSF111364 30 273 5.23E-84 T 12-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 M892_14670 945f8fec1300c905198320d8ec6da387 273 Gene3D G3DSA:2.40.230.20 23 273 3.6E-81 T 12-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 M892_14670 945f8fec1300c905198320d8ec6da387 273 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 30 273 1.5E-98 T 12-10-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 M892_14510 730092842fa133d36202b3dd4cc8497e 296 Gene3D G3DSA:1.10.530.10 109 287 3.5E-48 T 12-10-2018 M892_14510 730092842fa133d36202b3dd4cc8497e 296 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 147 175 - T 12-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 M892_14510 730092842fa133d36202b3dd4cc8497e 296 Pfam PF11873 Domain of unknown function (DUF3393) 1 124 8.1E-55 T 12-10-2018 IPR024570 Murein transglycosylase-C, N-terminal M892_14510 730092842fa133d36202b3dd4cc8497e 296 SUPERFAMILY SSF53955 104 289 2.14E-35 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily M892_14510 730092842fa133d36202b3dd4cc8497e 296 Pfam PF01464 Transglycosylase SLT domain 130 255 6.3E-28 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 M892_24125 963636b07e5a12042d5e8600f9fa9457 469 SUPERFAMILY SSF81442 7 465 2.88E-105 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_24125 963636b07e5a12042d5e8600f9fa9457 469 Gene3D G3DSA:1.20.210.10 2 469 2.1E-179 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_24125 963636b07e5a12042d5e8600f9fa9457 469 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 7 460 3.6E-178 T 12-10-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 M892_24125 963636b07e5a12042d5e8600f9fa9457 469 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 202 257 - T 12-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_24125 963636b07e5a12042d5e8600f9fa9457 469 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 12 441 1.6E-97 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_12585 9c09c7fbab3332ad50690c7c397171ff 71 TIGRFAM TIGR02975 phageshock_pspG: phage shock protein G 2 64 8.1E-22 T 12-10-2018 IPR014318 Phage shock protein, PspG M892_12585 9c09c7fbab3332ad50690c7c397171ff 71 Pfam PF09583 Phage shock protein G (Phageshock_PspG) 1 63 4.4E-23 T 12-10-2018 IPR014318 Phage shock protein, PspG M892_16685 8cb135173a7a83394b50de7aace05f65 548 Pfam PF02470 MlaD protein 287 391 7.3E-14 T 12-10-2018 IPR003399 Mce/MlaD M892_16685 8cb135173a7a83394b50de7aace05f65 548 Pfam PF02470 MlaD protein 43 134 3.5E-10 T 12-10-2018 IPR003399 Mce/MlaD M892_16685 8cb135173a7a83394b50de7aace05f65 548 Pfam PF02470 MlaD protein 160 218 6.2E-7 T 12-10-2018 IPR003399 Mce/MlaD M892_12885 0771b9df6d4a8e43f3417b241ecd89aa 164 Pfam PF03968 OstA-like protein 30 141 4.7E-30 T 12-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal M892_12885 0771b9df6d4a8e43f3417b241ecd89aa 164 Gene3D G3DSA:2.60.450.10 20 157 5.8E-42 T 12-10-2018 M892_12885 0771b9df6d4a8e43f3417b241ecd89aa 164 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 20 160 1.1E-47 T 12-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 M892_12885 0771b9df6d4a8e43f3417b241ecd89aa 164 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 1 160 24.428 T 12-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 M892_09030 d318c3f903e96c0876765cd13d1c919d 476 SUPERFAMILY SSF52540 18 235 2.32E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_09030 d318c3f903e96c0876765cd13d1c919d 476 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 18 474 53.899 T 12-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 M892_09030 d318c3f903e96c0876765cd13d1c919d 476 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 82 97 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site M892_09030 d318c3f903e96c0876765cd13d1c919d 476 SUPERFAMILY SSF50447 242 324 5.3E-24 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily M892_09030 d318c3f903e96c0876765cd13d1c919d 476 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 33 213 1.9E-13 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 M892_09030 d318c3f903e96c0876765cd13d1c919d 476 Pfam PF00009 Elongation factor Tu GTP binding domain 26 233 3.3E-45 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M892_09030 d318c3f903e96c0876765cd13d1c919d 476 Gene3D G3DSA:3.40.50.300 6 239 1.1E-71 T 12-10-2018 M892_09030 d318c3f903e96c0876765cd13d1c919d 476 SUPERFAMILY SSF50465 332 434 5.76E-30 T 12-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal M892_09030 d318c3f903e96c0876765cd13d1c919d 476 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 27 433 5.2E-199 T 12-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 M892_09030 d318c3f903e96c0876765cd13d1c919d 476 PRINTS PR00315 GTP-binding elongation factor signature 125 136 5.9E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M892_09030 d318c3f903e96c0876765cd13d1c919d 476 PRINTS PR00315 GTP-binding elongation factor signature 109 119 5.9E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M892_09030 d318c3f903e96c0876765cd13d1c919d 476 PRINTS PR00315 GTP-binding elongation factor signature 89 97 5.9E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M892_09030 d318c3f903e96c0876765cd13d1c919d 476 PRINTS PR00315 GTP-binding elongation factor signature 162 171 5.9E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M892_09030 d318c3f903e96c0876765cd13d1c919d 476 PRINTS PR00315 GTP-binding elongation factor signature 28 41 5.9E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M892_09030 d318c3f903e96c0876765cd13d1c919d 476 Gene3D G3DSA:2.40.30.10 331 434 3.6E-29 T 12-10-2018 M892_09030 d318c3f903e96c0876765cd13d1c919d 476 Gene3D G3DSA:2.40.30.10 242 327 6.1E-27 T 12-10-2018 M892_16070 95ac1c07fb9d4bf9c92bbb2585467fe9 138 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 126 4.3E-23 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain M892_16070 95ac1c07fb9d4bf9c92bbb2585467fe9 138 Gene3D G3DSA:3.10.180.10 3 135 1.9E-50 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M892_16070 95ac1c07fb9d4bf9c92bbb2585467fe9 138 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 5 136 3.9E-69 T 12-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 M892_16070 95ac1c07fb9d4bf9c92bbb2585467fe9 138 ProSitePatterns PS00934 Glyoxalase I signature 1. 8 29 - T 12-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 M892_16070 95ac1c07fb9d4bf9c92bbb2585467fe9 138 SUPERFAMILY SSF54593 3 130 1.48E-35 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M892_19260 046bd7a3bf6b9230d7e18fd0ca229579 89 Gene3D G3DSA:1.20.1720.10 32 82 1.3E-7 T 12-10-2018 M892_19260 046bd7a3bf6b9230d7e18fd0ca229579 89 SUPERFAMILY SSF103473 28 81 8.5E-5 T 12-10-2018 IPR036259 MFS transporter superfamily M892_07015 492ab550a850bf68db1b744829e026f4 260 Gene3D G3DSA:1.10.150.20 167 255 6.8E-22 T 12-10-2018 M892_07015 492ab550a850bf68db1b744829e026f4 260 SMART SM00475 3 254 4.2E-71 T 12-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 M892_07015 492ab550a850bf68db1b744829e026f4 260 Hamap MF_01192 Flap endonuclease Xni [xni]. 2 255 45.633 T 12-10-2018 IPR022895 Flap endonuclease Xni GO:0048256 M892_07015 492ab550a850bf68db1b744829e026f4 260 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 161 1.1E-30 T 12-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 M892_07015 492ab550a850bf68db1b744829e026f4 260 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 165 258 1.4E-23 T 12-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 M892_07015 492ab550a850bf68db1b744829e026f4 260 SUPERFAMILY SSF47807 164 258 9.72E-21 T 12-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily M892_07015 492ab550a850bf68db1b744829e026f4 260 SUPERFAMILY SSF88723 4 164 8.34E-39 T 12-10-2018 IPR029060 PIN-like domain superfamily M892_07015 492ab550a850bf68db1b744829e026f4 260 SMART SM00279 167 202 1.7E-9 T 12-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 M892_07015 492ab550a850bf68db1b744829e026f4 260 Gene3D G3DSA:3.40.50.1010 1 166 3.4E-52 T 12-10-2018 M892_08595 1f2f1475b944136447973ec7c7d902d2 267 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 264 17.594 T 12-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 M892_08595 1f2f1475b944136447973ec7c7d902d2 267 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 6 257 2.4E-73 T 12-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 M892_08595 1f2f1475b944136447973ec7c7d902d2 267 Pfam PF02673 Bacitracin resistance protein BacA 6 258 8.3E-83 T 12-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 M892_08585 9b30034c3952ce50d6b4bb25891dd65a 541 Gene3D G3DSA:1.10.101.10 460 527 9.5E-21 T 12-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 M892_08585 9b30034c3952ce50d6b4bb25891dd65a 541 Pfam PF13401 AAA domain 42 171 4.5E-24 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_08585 9b30034c3952ce50d6b4bb25891dd65a 541 Gene3D G3DSA:3.90.70.10 343 459 2.5E-33 T 12-10-2018 M892_08585 9b30034c3952ce50d6b4bb25891dd65a 541 SMART SM00382 42 195 1.1E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_08585 9b30034c3952ce50d6b4bb25891dd65a 541 SUPERFAMILY SSF52540 6 264 1.88E-34 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_08585 9b30034c3952ce50d6b4bb25891dd65a 541 Gene3D G3DSA:3.40.50.300 25 184 6.8E-15 T 12-10-2018 M892_08585 9b30034c3952ce50d6b4bb25891dd65a 541 Pfam PF01471 Putative peptidoglycan binding domain 469 522 8.2E-6 T 12-10-2018 IPR002477 Peptidoglycan binding-like M892_08585 9b30034c3952ce50d6b4bb25891dd65a 541 SUPERFAMILY SSF47090 455 531 1.43E-11 T 12-10-2018 IPR036365 PGBD-like superfamily M892_01695 c1088a494b0086549f92d54e01d90a35 180 Pfam PF07126 Cell-division protein ZapC 1 168 1.3E-64 T 12-10-2018 IPR009809 Cell division protein ZapC M892_01695 c1088a494b0086549f92d54e01d90a35 180 PIRSF PIRSF010252 1 178 1.7E-69 T 12-10-2018 IPR009809 Cell division protein ZapC M892_01695 c1088a494b0086549f92d54e01d90a35 180 Hamap MF_00906 Cell division protein ZapC [zapC]. 1 177 35.855 T 12-10-2018 IPR009809 Cell division protein ZapC M892_00715 bace12f9a875b6464ba120b6824805c5 174 SUPERFAMILY SSF55729 16 157 1.38E-23 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_00715 bace12f9a875b6464ba120b6824805c5 174 Pfam PF00583 Acetyltransferase (GNAT) family 45 153 1.9E-12 T 12-10-2018 IPR000182 GNAT domain M892_00715 bace12f9a875b6464ba120b6824805c5 174 Gene3D G3DSA:3.40.630.30 20 167 1.9E-22 T 12-10-2018 M892_04550 2d1bc4f3949f74f67133c35f8b723b1b 349 TIGRFAM TIGR01404 FlhB_rel_III: type III secretion protein, YscU/HrpY family 3 343 1.3E-132 T 12-10-2018 IPR006307 Type III exporter system, secretion apparatus protein BsaZ GO:0009306|GO:0016021 M892_04550 2d1bc4f3949f74f67133c35f8b723b1b 349 SUPERFAMILY SSF160544 238 345 6.54E-33 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal M892_04550 2d1bc4f3949f74f67133c35f8b723b1b 349 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 202 220 7.1E-44 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 M892_04550 2d1bc4f3949f74f67133c35f8b723b1b 349 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 222 239 7.1E-44 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 M892_04550 2d1bc4f3949f74f67133c35f8b723b1b 349 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 296 317 7.1E-44 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 M892_04550 2d1bc4f3949f74f67133c35f8b723b1b 349 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 266 281 7.1E-44 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 M892_04550 2d1bc4f3949f74f67133c35f8b723b1b 349 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 6 28 7.1E-44 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 M892_04550 2d1bc4f3949f74f67133c35f8b723b1b 349 Gene3D G3DSA:3.40.1690.10 211 349 1.2E-54 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal M892_04550 2d1bc4f3949f74f67133c35f8b723b1b 349 Pfam PF01312 FlhB HrpN YscU SpaS Family 3 341 1.0E-113 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 M892_22630 fe98ffd17b419fadd1f31c517f7747f7 265 Gene3D G3DSA:3.30.2010.10 56 143 1.6E-7 T 12-10-2018 M892_22630 fe98ffd17b419fadd1f31c517f7747f7 265 Pfam PF01435 Peptidase family M48 74 249 9.5E-45 T 12-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 M892_06420 773eedb789245e5691ccffc1b81e6af9 305 Gene3D G3DSA:3.40.50.720 2 304 7.8E-77 T 12-10-2018 M892_06420 773eedb789245e5691ccffc1b81e6af9 305 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 225 1.2E-24 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 M892_06420 773eedb789245e5691ccffc1b81e6af9 305 SUPERFAMILY SSF51735 1 300 8.65E-46 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_06420 773eedb789245e5691ccffc1b81e6af9 305 Pfam PF08338 Domain of unknown function (DUF1731) 253 299 3.2E-14 T 12-10-2018 IPR013549 Domain of unknown function DUF1731 M892_06420 773eedb789245e5691ccffc1b81e6af9 305 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 296 4.8E-102 T 12-10-2018 IPR010099 Epimerase family protein SDR39U1 M892_16645 a4e1a4a439f730e4175ed0cfdfbcc7d0 94 Gene3D G3DSA:4.10.520.10 2 39 5.5E-12 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 M892_16645 a4e1a4a439f730e4175ed0cfdfbcc7d0 94 Gene3D G3DSA:4.10.520.10 40 92 3.7E-29 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 M892_16645 a4e1a4a439f730e4175ed0cfdfbcc7d0 94 Pfam PF00216 Bacterial DNA-binding protein 1 91 6.2E-31 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 M892_16645 a4e1a4a439f730e4175ed0cfdfbcc7d0 94 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 92 2.2E-49 T 12-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 M892_16645 a4e1a4a439f730e4175ed0cfdfbcc7d0 94 SMART SM00411 1 91 4.4E-43 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 M892_16645 a4e1a4a439f730e4175ed0cfdfbcc7d0 94 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 1.2E-18 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 M892_16645 a4e1a4a439f730e4175ed0cfdfbcc7d0 94 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 1.2E-18 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 M892_16645 a4e1a4a439f730e4175ed0cfdfbcc7d0 94 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 1.2E-18 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 M892_16645 a4e1a4a439f730e4175ed0cfdfbcc7d0 94 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 12-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 M892_16645 a4e1a4a439f730e4175ed0cfdfbcc7d0 94 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 30.997 T 12-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 M892_16645 a4e1a4a439f730e4175ed0cfdfbcc7d0 94 SUPERFAMILY SSF47729 1 91 2.36E-30 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 M892_23130 da2e10a6aa22dc69073d8c534811a152 520 Pfam PF08811 Protein of unknown function (DUF1800) 41 505 9.6E-89 T 12-10-2018 IPR014917 Protein of unknown function DUF1800 M892_25835 93e768f9048ef1e1b8014d10580a7fd6 347 SUPERFAMILY SSF53098 223 315 2.28E-7 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_25835 93e768f9048ef1e1b8014d10580a7fd6 347 SUPERFAMILY SSF46689 16 131 1.43E-23 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_25835 93e768f9048ef1e1b8014d10580a7fd6 347 Pfam PF13592 Winged helix-turn helix 99 155 4.0E-19 T 12-10-2018 IPR025959 Winged helix-turn helix domain M892_25835 93e768f9048ef1e1b8014d10580a7fd6 347 Pfam PF13384 Homeodomain-like domain 28 67 9.4E-8 T 12-10-2018 M892_25835 93e768f9048ef1e1b8014d10580a7fd6 347 Gene3D G3DSA:3.30.420.470 137 342 8.0E-12 T 12-10-2018 M892_25835 93e768f9048ef1e1b8014d10580a7fd6 347 Pfam PF13358 DDE superfamily endonuclease 169 311 2.0E-34 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_12475 88cb2b640fed1fe622216f438971a10c 171 Pfam PF04351 Pilus assembly protein, PilP 25 170 6.0E-41 T 12-10-2018 IPR007446 Pilus assembly protein PilP M892_12475 88cb2b640fed1fe622216f438971a10c 171 Gene3D G3DSA:2.30.30.830 79 171 4.1E-25 T 12-10-2018 M892_12475 88cb2b640fed1fe622216f438971a10c 171 PIRSF PIRSF016481 1 171 2.1E-51 T 12-10-2018 IPR007446 Pilus assembly protein PilP M892_12660 6e3e374e094207139dcadad8d5dc5234 382 PIRSF PIRSF000524 14 382 1.5E-111 T 12-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 M892_12660 6e3e374e094207139dcadad8d5dc5234 382 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 198 218 - T 12-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site M892_12660 6e3e374e094207139dcadad8d5dc5234 382 Gene3D G3DSA:3.90.1150.10 18 380 1.2E-144 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M892_12660 6e3e374e094207139dcadad8d5dc5234 382 Pfam PF00266 Aminotransferase class-V 22 349 1.6E-36 T 12-10-2018 IPR000192 Aminotransferase class V domain M892_12660 6e3e374e094207139dcadad8d5dc5234 382 SUPERFAMILY SSF53383 18 380 2.56E-102 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M892_12660 6e3e374e094207139dcadad8d5dc5234 382 Gene3D G3DSA:3.40.640.10 31 278 1.2E-144 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M892_25520 e125e2ca830611407605b4bea6d7f998 92 Pfam PF13545 Crp-like helix-turn-helix domain 15 84 2.3E-13 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 M892_25520 e125e2ca830611407605b4bea6d7f998 92 SUPERFAMILY SSF46785 15 86 1.85E-13 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_25520 e125e2ca830611407605b4bea6d7f998 92 SMART SM00419 30 78 1.5E-6 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 M892_25520 e125e2ca830611407605b4bea6d7f998 92 Gene3D G3DSA:1.10.10.10 13 88 2.7E-14 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_06325 ba34b1122f06999cfdff045e316aa21e 149 Gene3D G3DSA:1.10.10.10 1 84 9.8E-35 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_06325 ba34b1122f06999cfdff045e316aa21e 149 SUPERFAMILY SSF46785 5 135 1.08E-43 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_06325 ba34b1122f06999cfdff045e316aa21e 149 Pfam PF01475 Ferric uptake regulator family 11 130 3.1E-46 T 12-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 M892_06325 ba34b1122f06999cfdff045e316aa21e 149 Gene3D G3DSA:3.30.1490.190 85 141 1.2E-23 T 12-10-2018 M892_27775 bbed390c5ce46ccdbd7b7b4a37d57db8 336 Pfam PF11168 Protein of unknown function (DUF2955) 17 155 3.5E-27 T 12-10-2018 IPR022604 Protein of unknown function DUF2955 M892_21085 db78015c36aefd02819548e1efddeeca 420 Pfam PF01979 Amidohydrolase family 52 413 1.6E-34 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 M892_21085 db78015c36aefd02819548e1efddeeca 420 SUPERFAMILY SSF51338 2 416 8.28E-17 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 M892_21085 db78015c36aefd02819548e1efddeeca 420 Gene3D G3DSA:3.20.20.140 57 372 8.8E-123 T 12-10-2018 M892_21085 db78015c36aefd02819548e1efddeeca 420 SUPERFAMILY SSF51556 56 364 5.92E-72 T 12-10-2018 IPR032466 Metal-dependent hydrolase M892_21085 db78015c36aefd02819548e1efddeeca 420 Gene3D G3DSA:2.30.40.10 7 414 8.8E-123 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 M892_13160 f1031af1561651857f573a8208b3e10d 376 Pfam PF11873 Domain of unknown function (DUF3393) 3 205 1.4E-79 T 12-10-2018 IPR024570 Murein transglycosylase-C, N-terminal M892_13160 f1031af1561651857f573a8208b3e10d 376 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 228 256 - T 12-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 M892_13160 f1031af1561651857f573a8208b3e10d 376 Gene3D G3DSA:1.10.530.10 190 370 6.7E-50 T 12-10-2018 M892_13160 f1031af1561651857f573a8208b3e10d 376 SUPERFAMILY SSF53955 186 371 3.66E-36 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily M892_13160 f1031af1561651857f573a8208b3e10d 376 Pfam PF01464 Transglycosylase SLT domain 211 332 2.8E-28 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 M892_17130 c09766d23317e91e243d5c48a33712d1 255 Gene3D G3DSA:3.30.460.10 7 91 9.9E-7 T 12-10-2018 M892_17130 c09766d23317e91e243d5c48a33712d1 255 SUPERFAMILY SSF81301 13 80 6.54E-7 T 12-10-2018 M892_02420 3da737faa86625c0c4a78d024c2af003 164 Gene3D G3DSA:3.40.50.1820 4 161 4.4E-45 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_02420 3da737faa86625c0c4a78d024c2af003 164 SUPERFAMILY SSF53474 7 147 2.78E-38 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_02420 3da737faa86625c0c4a78d024c2af003 164 Pfam PF07859 alpha/beta hydrolase fold 24 144 7.9E-40 T 12-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 M892_02235 55b1bc41320f80c991c355800bf00899 461 Pfam PF04932 O-Antigen ligase 240 377 1.6E-17 T 12-10-2018 IPR007016 O-antigen ligase-related M892_06860 339e4de6d922451e9dae2c2243cb1080 185 Pfam PF04390 Lipopolysaccharide-assembly 45 159 7.0E-13 T 12-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 M892_06860 339e4de6d922451e9dae2c2243cb1080 185 Gene3D G3DSA:3.30.160.150 19 167 1.3E-49 T 12-10-2018 M892_06860 339e4de6d922451e9dae2c2243cb1080 185 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 7 164 23.98 T 12-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 M892_26750 e109415e4e1b81940ca24b8439de0405 336 TIGRFAM TIGR03261 phnS2: putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein 6 333 1.1E-158 T 12-10-2018 IPR017663 ABC transport system, 1-aminoethylphosphonate-binding protein, putative M892_26750 e109415e4e1b81940ca24b8439de0405 336 Gene3D G3DSA:3.40.190.10 30 297 6.4E-78 T 12-10-2018 M892_26750 e109415e4e1b81940ca24b8439de0405 336 PIRSF PIRSF002825 2 329 6.6E-79 T 12-10-2018 IPR026045 Ferric binding protein M892_26750 e109415e4e1b81940ca24b8439de0405 336 Gene3D G3DSA:3.40.190.10 133 311 6.4E-78 T 12-10-2018 M892_26750 e109415e4e1b81940ca24b8439de0405 336 Pfam PF13343 Bacterial extracellular solute-binding protein 75 293 3.7E-26 T 12-10-2018 M892_26750 e109415e4e1b81940ca24b8439de0405 336 SUPERFAMILY SSF53850 27 326 1.04E-62 T 12-10-2018 M892_23480 a8ba7eca153fd07c8da51267c5282928 456 SUPERFAMILY SSF53098 123 377 4.4E-24 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_23480 a8ba7eca153fd07c8da51267c5282928 456 Pfam PF01609 Transposase DDE domain 143 366 2.8E-23 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_23480 a8ba7eca153fd07c8da51267c5282928 456 Pfam PF13006 Insertion element 4 transposase N-terminal 32 122 4.9E-24 T 12-10-2018 IPR024473 Transposase, IS4, N-terminal M892_16135 f1fcb3ad8df343e1aed411300718292c 212 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 9 193 4.8E-64 T 12-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 M892_16135 f1fcb3ad8df343e1aed411300718292c 212 Pfam PF04205 FMN-binding domain 100 189 2.9E-19 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 M892_16135 f1fcb3ad8df343e1aed411300718292c 212 PIRSF PIRSF006091 1 205 2.5E-77 T 12-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 M892_16135 f1fcb3ad8df343e1aed411300718292c 212 Hamap MF_00479 Ion-translocating oxidoreductase complex subunit G [rsxG]. 2 194 26.58 T 12-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 M892_16135 f1fcb3ad8df343e1aed411300718292c 212 SMART SM00900 100 192 4.1E-33 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 M892_22595 69ca4876a0ec6faeb76f73de24e9ad71 510 Pfam PF13817 IS66 C-terminal element 470 506 7.5E-8 T 12-10-2018 IPR039552 Transposase IS66, C-terminal M892_22595 69ca4876a0ec6faeb76f73de24e9ad71 510 Pfam PF03050 Transposase IS66 family 180 463 1.6E-101 T 12-10-2018 IPR004291 Transposase, IS66 M892_22595 69ca4876a0ec6faeb76f73de24e9ad71 510 Pfam PF13007 Transposase C of IS166 homeodomain 38 108 2.2E-14 T 12-10-2018 IPR024463 Transposase TnpC, homeodomain M892_22595 69ca4876a0ec6faeb76f73de24e9ad71 510 Pfam PF13005 zinc-finger binding domain of transposase IS66 116 160 1.6E-16 T 12-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 M892_19295 37035b19a961027cf86978a4104a5c12 446 PIRSF PIRSF004548 1 440 4.4E-138 T 12-10-2018 IPR010364 Uncharacterised protein family, inner membrane CreD M892_19295 37035b19a961027cf86978a4104a5c12 446 Pfam PF06123 Inner membrane protein CreD 9 429 3.4E-144 T 12-10-2018 IPR010364 Uncharacterised protein family, inner membrane CreD M892_06200 db4edd4d06555a0b145d03c4efedfb79 76 Gene3D G3DSA:1.10.10.10 1 72 9.1E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_06200 db4edd4d06555a0b145d03c4efedfb79 76 SUPERFAMILY SSF46785 1 55 1.27E-13 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_06200 db4edd4d06555a0b145d03c4efedfb79 76 Pfam PF09012 FeoC like transcriptional regulator 2 53 5.4E-13 T 12-10-2018 IPR015102 Transcriptional regulator HTH-type, FeoC M892_05545 a4b5118c787161c16e91847dec73b912 486 TIGRFAM TIGR00797 matE: MATE efflux family protein 28 406 2.4E-55 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M892_05545 a4b5118c787161c16e91847dec73b912 486 PIRSF PIRSF006603 2 448 3.5E-77 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M892_05545 a4b5118c787161c16e91847dec73b912 486 Pfam PF01554 MatE 29 184 1.6E-22 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M892_05545 a4b5118c787161c16e91847dec73b912 486 Pfam PF01554 MatE 243 402 4.4E-17 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M892_05245 564b3a009ab1512416e5165b33666053 486 Gene3D G3DSA:3.40.50.2000 9 482 2.7E-156 T 12-10-2018 M892_05245 564b3a009ab1512416e5165b33666053 486 SUPERFAMILY SSF53756 5 486 7.14E-111 T 12-10-2018 M892_05245 564b3a009ab1512416e5165b33666053 486 Hamap MF_00484 Glycogen synthase [glgA]. 7 484 39.463 T 12-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 M892_05245 564b3a009ab1512416e5165b33666053 486 Gene3D G3DSA:3.40.50.2000 257 468 2.7E-156 T 12-10-2018 M892_05245 564b3a009ab1512416e5165b33666053 486 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 8 483 2.4E-166 T 12-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 M892_05245 564b3a009ab1512416e5165b33666053 486 Pfam PF08323 Starch synthase catalytic domain 9 240 1.4E-67 T 12-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 M892_05245 564b3a009ab1512416e5165b33666053 486 Pfam PF00534 Glycosyl transferases group 1 304 446 1.9E-14 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 M892_00870 bc8b0ba5306e374e9bb0c43b262ff057 648 Pfam PF09423 PhoD-like phosphatase 320 562 1.5E-6 T 12-10-2018 IPR018946 Alkaline phosphatase D-related M892_00870 bc8b0ba5306e374e9bb0c43b262ff057 648 SUPERFAMILY SSF56300 158 540 1.52E-12 T 12-10-2018 M892_00870 bc8b0ba5306e374e9bb0c43b262ff057 648 Gene3D G3DSA:3.60.21.70 317 570 1.2E-10 T 12-10-2018 IPR038607 PhoD-like superfamily M892_02080 cbcb09c80dc14e1995b1a04f6e50cf8b 249 SMART SM01144 27 227 1.8E-61 T 12-10-2018 IPR005636 DTW M892_02080 cbcb09c80dc14e1995b1a04f6e50cf8b 249 Pfam PF03942 DTW domain 30 221 9.2E-39 T 12-10-2018 IPR005636 DTW M892_22565 ad650b11cf0ac5707a9241cfbc0d9760 321 Gene3D G3DSA:2.40.160.10 26 265 4.3E-5 T 12-10-2018 IPR023614 Porin domain superfamily M892_22565 ad650b11cf0ac5707a9241cfbc0d9760 321 SUPERFAMILY SSF56925 88 258 3.66E-7 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel M892_08590 98d432626816c683d0281260ea4c18c9 406 SUPERFAMILY SSF81301 2 119 2.83E-31 T 12-10-2018 M892_08590 98d432626816c683d0281260ea4c18c9 406 Pfam PF01966 HD domain 229 323 1.6E-8 T 12-10-2018 IPR006674 HD domain M892_08590 98d432626816c683d0281260ea4c18c9 406 SUPERFAMILY SSF81891 120 400 7.06E-55 T 12-10-2018 M892_08590 98d432626816c683d0281260ea4c18c9 406 PIRSF PIRSF000813 1 406 8.4E-205 T 12-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 M892_08590 98d432626816c683d0281260ea4c18c9 406 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 212 9.2E-14 T 12-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 M892_08590 98d432626816c683d0281260ea4c18c9 406 Gene3D G3DSA:3.30.460.10 1 121 3.5E-29 T 12-10-2018 M892_08590 98d432626816c683d0281260ea4c18c9 406 Gene3D G3DSA:1.10.3090.10 122 403 9.4E-45 T 12-10-2018 M892_08590 98d432626816c683d0281260ea4c18c9 406 Hamap MF_01262 CCA-adding enzyme [cca]. 1 401 43.1 T 12-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 M892_08590 98d432626816c683d0281260ea4c18c9 406 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 406 52.44 T 12-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 M892_08590 98d432626816c683d0281260ea4c18c9 406 Pfam PF01743 Poly A polymerase head domain 3 122 4.5E-19 T 12-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 M892_19475 2a5ca10fa962871093e93921c4ca8ead 217 SUPERFAMILY SSF52499 4 212 3.4E-25 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 M892_19475 2a5ca10fa962871093e93921c4ca8ead 217 Pfam PF00857 Isochorismatase family 10 209 8.8E-32 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 M892_19475 2a5ca10fa962871093e93921c4ca8ead 217 Gene3D G3DSA:3.40.50.850 7 212 2.2E-35 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 M892_28460 303ec4b2c0a41045f009d9e19561ca60 397 Gene3D G3DSA:2.40.128.260 210 330 1.9E-35 T 12-10-2018 M892_28460 303ec4b2c0a41045f009d9e19561ca60 397 Gene3D G3DSA:2.40.128.260 331 397 2.1E-6 T 12-10-2018 M892_28460 303ec4b2c0a41045f009d9e19561ca60 397 Pfam PF03743 Bacterial conjugation TrbI-like protein 215 389 3.0E-43 T 12-10-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI M892_20480 24de9aaddf5901857157d591907d7150 194 SUPERFAMILY SSF52218 1 192 3.24E-36 T 12-10-2018 IPR029039 Flavoprotein-like superfamily M892_20480 24de9aaddf5901857157d591907d7150 194 Gene3D G3DSA:3.40.50.360 1 194 3.7E-52 T 12-10-2018 IPR029039 Flavoprotein-like superfamily M892_20480 24de9aaddf5901857157d591907d7150 194 Pfam PF02525 Flavodoxin-like fold 3 185 1.3E-34 T 12-10-2018 IPR003680 Flavodoxin-like fold M892_14005 77049526966bb4d35436e5cf0669e87e 113 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 9 113 1.3E-36 T 12-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 M892_14005 77049526966bb4d35436e5cf0669e87e 113 SUPERFAMILY SSF89360 7 99 3.53E-29 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 M892_14005 77049526966bb4d35436e5cf0669e87e 113 Gene3D G3DSA:2.60.300.12 7 113 1.3E-31 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 M892_14005 77049526966bb4d35436e5cf0669e87e 113 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 113 35.796 T 12-10-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 M892_14005 77049526966bb4d35436e5cf0669e87e 113 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 94 111 - T 12-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 M892_14005 77049526966bb4d35436e5cf0669e87e 113 Pfam PF01521 Iron-sulphur cluster biosynthesis 8 108 2.0E-18 T 12-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 M892_21390 4c899efd0c7f2f7e669d937b0d6093d4 226 SMART SM00448 1 108 3.2E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_21390 4c899efd0c7f2f7e669d937b0d6093d4 226 Pfam PF00072 Response regulator receiver domain 1 108 7.8E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_21390 4c899efd0c7f2f7e669d937b0d6093d4 226 Gene3D G3DSA:3.40.50.2300 1 123 3.5E-33 T 12-10-2018 M892_21390 4c899efd0c7f2f7e669d937b0d6093d4 226 SUPERFAMILY SSF46894 131 225 4.54E-18 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M892_21390 4c899efd0c7f2f7e669d937b0d6093d4 226 SMART SM00862 149 225 3.0E-12 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M892_21390 4c899efd0c7f2f7e669d937b0d6093d4 226 Gene3D G3DSA:1.10.10.10 124 226 2.6E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_21390 4c899efd0c7f2f7e669d937b0d6093d4 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 2.3E-18 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M892_21390 4c899efd0c7f2f7e669d937b0d6093d4 226 SUPERFAMILY SSF52172 1 120 4.84E-36 T 12-10-2018 IPR011006 CheY-like superfamily M892_14855 ec5e3096160130596a6ea47ec8a0eb69 99 Pfam PF11743 Protein of unknown function (DUF3301) 6 96 2.9E-29 T 12-10-2018 IPR021732 Protein of unknown function DUF3301 M892_23855 fd836f6f9eafc03d3f5c1a0757fe1287 1004 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 14 332 1.9E-71 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 M892_23855 fd836f6f9eafc03d3f5c1a0757fe1287 1004 Gene3D G3DSA:3.90.700.10 796 938 5.5E-106 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 M892_23855 fd836f6f9eafc03d3f5c1a0757fe1287 1004 SMART SM00900 398 472 9.2E-19 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 M892_23855 fd836f6f9eafc03d3f5c1a0757fe1287 1004 SUPERFAMILY SSF51395 4 336 4.19E-93 T 12-10-2018 M892_23855 fd836f6f9eafc03d3f5c1a0757fe1287 1004 Gene3D G3DSA:3.20.20.70 1 371 4.5E-104 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M892_23855 fd836f6f9eafc03d3f5c1a0757fe1287 1004 SUPERFAMILY SSF56425 792 942 3.77E-35 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 M892_23855 fd836f6f9eafc03d3f5c1a0757fe1287 1004 Gene3D G3DSA:3.50.50.60 482 586 7.6E-18 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_23855 fd836f6f9eafc03d3f5c1a0757fe1287 1004 Pfam PF00890 FAD binding domain 499 986 3.5E-62 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 M892_23855 fd836f6f9eafc03d3f5c1a0757fe1287 1004 SUPERFAMILY SSF51905 485 1002 3.79E-51 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_23855 fd836f6f9eafc03d3f5c1a0757fe1287 1004 Gene3D G3DSA:3.50.50.60 601 1000 5.5E-106 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_23855 fd836f6f9eafc03d3f5c1a0757fe1287 1004 Pfam PF04205 FMN-binding domain 398 469 4.1E-12 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 M892_23855 fd836f6f9eafc03d3f5c1a0757fe1287 1004 TIGRFAM TIGR01813 flavo_cyto_c: flavocytochrome c 624 998 3.9E-93 T 12-10-2018 IPR010960 Flavocytochrome c GO:0000104|GO:0055114 M892_23855 fd836f6f9eafc03d3f5c1a0757fe1287 1004 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 499 521 3.8E-5 T 12-10-2018 M892_23855 fd836f6f9eafc03d3f5c1a0757fe1287 1004 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 889 909 3.8E-5 T 12-10-2018 M892_12375 163b5565b48decf16ad5bf5e0c3457d2 106 Hamap MF_00744 Met repressor [metJ]. 1 105 34.758 T 12-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 M892_12375 163b5565b48decf16ad5bf5e0c3457d2 106 Gene3D G3DSA:1.10.140.10 2 105 4.7E-56 T 12-10-2018 IPR023453 Methionine repressor MetJ domain superfamily M892_12375 163b5565b48decf16ad5bf5e0c3457d2 106 ProDom PD020365 REPRESSOR MET BIOSYNTHESIS TRANSCRIPTION METJ METHIONINE REGULON DNA-BINDING REGULATORY AMINO-ACID 10 101 4.0E-49 T 12-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 M892_12375 163b5565b48decf16ad5bf5e0c3457d2 106 Pfam PF01340 Met Apo-repressor, MetJ 3 99 3.6E-59 T 12-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 M892_12375 163b5565b48decf16ad5bf5e0c3457d2 106 SUPERFAMILY SSF47598 3 104 8.67E-57 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 M892_10780 116c990347f4dca32a34906b1f28fffa 315 SUPERFAMILY SSF50486 208 310 9.03E-33 T 12-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 M892_10780 116c990347f4dca32a34906b1f28fffa 315 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 12-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 M892_10780 116c990347f4dca32a34906b1f28fffa 315 Gene3D G3DSA:3.40.50.170 1 209 2.7E-87 T 12-10-2018 M892_10780 116c990347f4dca32a34906b1f28fffa 315 Pfam PF02911 Formyl transferase, C-terminal domain 207 303 8.8E-29 T 12-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 M892_10780 116c990347f4dca32a34906b1f28fffa 315 Pfam PF00551 Formyl transferase 6 182 3.4E-45 T 12-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 M892_10780 116c990347f4dca32a34906b1f28fffa 315 Gene3D G3DSA:3.10.25.10 210 314 2.3E-37 T 12-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 M892_10780 116c990347f4dca32a34906b1f28fffa 315 SUPERFAMILY SSF53328 5 210 5.36E-66 T 12-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 M892_10780 116c990347f4dca32a34906b1f28fffa 315 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 311 1.5E-107 T 12-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 M892_10780 116c990347f4dca32a34906b1f28fffa 315 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 306 36.916 T 12-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 M892_15505 da037eedb6d1781093cd13f63762a6b4 87 Pfam PF08891 YfcL protein 4 84 1.8E-33 T 12-10-2018 IPR014987 Uncharacterised protein family YfcL M892_27900 066e3e1a9156a818f66a5d2de700cf02 408 Pfam PF03616 Sodium/glutamate symporter 9 376 8.7E-152 T 12-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 M892_27900 066e3e1a9156a818f66a5d2de700cf02 408 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 11 406 8.6E-137 T 12-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 M892_27900 066e3e1a9156a818f66a5d2de700cf02 408 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 5 407 23.774 T 12-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 M892_18720 689fa507c5dd3f537e3431c05696d9c6 184 Pfam PF01618 MotA/TolQ/ExbB proton channel family 73 177 3.0E-22 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel M892_18925 cbec1712b47d6154d10dce4b07ce1058 414 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 3 407 4.2E-178 T 12-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 M892_18925 cbec1712b47d6154d10dce4b07ce1058 414 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 411 35.543 T 12-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 M892_18925 cbec1712b47d6154d10dce4b07ce1058 414 PIRSF PIRSF016055 1 412 7.0E-187 T 12-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 M892_18925 cbec1712b47d6154d10dce4b07ce1058 414 Pfam PF03116 NQR2, RnfD, RnfE family 43 404 1.0E-105 T 12-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 M892_02295 26f5d8794e8b0333c6259a1fcc5aa717 159 SUPERFAMILY SSF53850 35 156 1.63E-7 T 12-10-2018 M892_02295 26f5d8794e8b0333c6259a1fcc5aa717 159 Gene3D G3DSA:3.40.190.10 39 158 2.4E-5 T 12-10-2018 M892_03760 97e5fd110682e482b80e25dd2673f1b7 627 Pfam PF02743 Cache domain 41 258 5.9E-34 T 12-10-2018 IPR033479 Double Cache domain 1 M892_03760 97e5fd110682e482b80e25dd2673f1b7 627 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 273 293 5.3E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M892_03760 97e5fd110682e482b80e25dd2673f1b7 627 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 492 521 5.3E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M892_03760 97e5fd110682e482b80e25dd2673f1b7 627 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 463 490 5.3E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M892_03760 97e5fd110682e482b80e25dd2673f1b7 627 SMART SM00283 365 626 1.3E-62 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M892_03760 97e5fd110682e482b80e25dd2673f1b7 627 Gene3D G3DSA:1.10.287.950 297 627 7.4E-72 T 12-10-2018 M892_03760 97e5fd110682e482b80e25dd2673f1b7 627 SMART SM00304 353 403 19.0 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M892_03760 97e5fd110682e482b80e25dd2673f1b7 627 SMART SM00304 296 350 6.4E-11 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M892_03760 97e5fd110682e482b80e25dd2673f1b7 627 Pfam PF00672 HAMP domain 300 346 3.0E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M892_03760 97e5fd110682e482b80e25dd2673f1b7 627 Gene3D G3DSA:3.30.450.20 60 168 2.3E-55 T 12-10-2018 M892_03760 97e5fd110682e482b80e25dd2673f1b7 627 SUPERFAMILY SSF103190 89 175 5.49E-12 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily M892_03760 97e5fd110682e482b80e25dd2673f1b7 627 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 427 593 2.9E-39 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M892_03760 97e5fd110682e482b80e25dd2673f1b7 627 SUPERFAMILY SSF58104 318 627 1.57E-75 T 12-10-2018 M892_03760 97e5fd110682e482b80e25dd2673f1b7 627 Gene3D G3DSA:3.30.450.20 49 268 2.3E-55 T 12-10-2018 M892_27745 9b72bf61b1ed56029576d4ca365e992d 185 Pfam PF00925 GTP cyclohydrolase II 2 154 2.5E-56 T 12-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 M892_27745 9b72bf61b1ed56029576d4ca365e992d 185 SUPERFAMILY SSF142695 2 156 6.15E-56 T 12-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 M892_27745 9b72bf61b1ed56029576d4ca365e992d 185 Gene3D G3DSA:3.40.50.10990 1 156 9.4E-63 T 12-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 M892_27745 9b72bf61b1ed56029576d4ca365e992d 185 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 1 179 34.942 T 12-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 M892_27745 9b72bf61b1ed56029576d4ca365e992d 185 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 2 177 1.6E-69 T 12-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 M892_07980 65a0e0e84cdf848fdebb09ca39b0f65b 556 Pfam PF06580 Histidine kinase 366 444 1.6E-26 T 12-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 M892_07980 65a0e0e84cdf848fdebb09ca39b0f65b 556 SUPERFAMILY SSF55781 226 351 2.7E-7 T 12-10-2018 M892_07980 65a0e0e84cdf848fdebb09ca39b0f65b 556 Gene3D G3DSA:3.30.450.40 226 352 2.2E-7 T 12-10-2018 IPR029016 GAF-like domain superfamily M892_07980 65a0e0e84cdf848fdebb09ca39b0f65b 556 Gene3D G3DSA:3.30.565.10 413 556 1.8E-13 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_07980 65a0e0e84cdf848fdebb09ca39b0f65b 556 SUPERFAMILY SSF55874 420 553 5.48E-12 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_07980 65a0e0e84cdf848fdebb09ca39b0f65b 556 Pfam PF13492 GAF domain 241 351 1.3E-6 T 12-10-2018 IPR003018 GAF domain GO:0005515 M892_07980 65a0e0e84cdf848fdebb09ca39b0f65b 556 Pfam PF07694 5TMR of 5TMR-LYT 26 194 9.4E-60 T 12-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 M892_11140 a54d6e21d874e828d101179b211f8136 417 SUPERFAMILY SSF51419 27 284 1.89E-82 T 12-10-2018 IPR029066 PLP-binding barrel M892_11140 a54d6e21d874e828d101179b211f8136 417 Gene3D G3DSA:3.20.20.10 35 277 9.8E-153 T 12-10-2018 IPR029066 PLP-binding barrel M892_11140 a54d6e21d874e828d101179b211f8136 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 78 90 2.3E-26 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 M892_11140 a54d6e21d874e828d101179b211f8136 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 191 204 2.3E-26 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 M892_11140 a54d6e21d874e828d101179b211f8136 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 370 383 2.3E-26 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 M892_11140 a54d6e21d874e828d101179b211f8136 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 272 291 2.3E-26 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 M892_11140 a54d6e21d874e828d101179b211f8136 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 58 76 2.3E-26 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 M892_11140 a54d6e21d874e828d101179b211f8136 417 SUPERFAMILY SSF50621 261 414 2.72E-53 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 M892_11140 a54d6e21d874e828d101179b211f8136 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 165 174 3.4E-30 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 M892_11140 a54d6e21d874e828d101179b211f8136 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 76 93 3.4E-30 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 M892_11140 a54d6e21d874e828d101179b211f8136 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 380 402 3.4E-30 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 M892_11140 a54d6e21d874e828d101179b211f8136 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 300 318 3.4E-30 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 M892_11140 a54d6e21d874e828d101179b211f8136 417 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 16 413 41.385 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 M892_11140 a54d6e21d874e828d101179b211f8136 417 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 36 282 2.9E-71 T 12-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 M892_11140 a54d6e21d874e828d101179b211f8136 417 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 5 412 8.6E-168 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 M892_11140 a54d6e21d874e828d101179b211f8136 417 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 58 76 - T 12-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site M892_11140 a54d6e21d874e828d101179b211f8136 417 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 31 370 2.4E-26 T 12-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 M892_11140 a54d6e21d874e828d101179b211f8136 417 Gene3D G3DSA:2.40.37.10 17 404 9.8E-153 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 M892_26545 dca063fac62b7564327a9c8d534be1a4 597 Pfam PF00999 Sodium/hydrogen exchanger family 16 387 7.7E-31 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 M892_26545 dca063fac62b7564327a9c8d534be1a4 597 SUPERFAMILY SSF51735 399 499 2.76E-8 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_26545 dca063fac62b7564327a9c8d534be1a4 597 Pfam PF02254 TrkA-N domain 399 490 1.3E-7 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 M892_26545 dca063fac62b7564327a9c8d534be1a4 597 Gene3D G3DSA:3.40.50.720 397 509 5.0E-10 T 12-10-2018 M892_26545 dca063fac62b7564327a9c8d534be1a4 597 Gene3D G3DSA:1.20.1530.20 6 389 7.2E-11 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily M892_20380 4044b13a6c1378ea3426700f2a1553ec 316 SUPERFAMILY SSF111369 101 158 2.75E-6 T 12-10-2018 M892_20380 4044b13a6c1378ea3426700f2a1553ec 316 Gene3D G3DSA:2.40.30.170 232 308 1.7E-8 T 12-10-2018 M892_20380 4044b13a6c1378ea3426700f2a1553ec 316 Gene3D G3DSA:2.40.50.100 33 67 2.9E-6 T 12-10-2018 M892_20380 4044b13a6c1378ea3426700f2a1553ec 316 Gene3D G3DSA:1.10.287.470 68 88 2.9E-6 T 12-10-2018 M892_20380 4044b13a6c1378ea3426700f2a1553ec 316 Gene3D G3DSA:2.40.50.100 197 231 1.7E-8 T 12-10-2018 M892_20380 4044b13a6c1378ea3426700f2a1553ec 316 Gene3D G3DSA:1.10.287.470 100 162 3.3E-11 T 12-10-2018 M892_20380 4044b13a6c1378ea3426700f2a1553ec 316 Gene3D G3DSA:1.10.287.470 169 196 1.7E-8 T 12-10-2018 M892_20380 4044b13a6c1378ea3426700f2a1553ec 316 Pfam PF13437 HlyD family secretion protein 196 276 2.5E-7 T 12-10-2018 M892_15705 da4f92f3cefda527bb76a670f274acd6 83 Pfam PF04226 Transglycosylase associated protein 33 80 2.1E-13 T 12-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 M892_10005 56c429d045c154f574aa80a42290a0e0 259 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 33 258 2.9E-82 T 12-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 M892_10005 56c429d045c154f574aa80a42290a0e0 259 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 166 180 - T 12-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 M892_10005 56c429d045c154f574aa80a42290a0e0 259 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 44 59 - T 12-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 M892_10005 56c429d045c154f574aa80a42290a0e0 259 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 24 258 38.019 T 12-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 M892_10005 56c429d045c154f574aa80a42290a0e0 259 Pfam PF01209 ubiE/COQ5 methyltransferase family 26 258 8.6E-102 T 12-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 M892_10005 56c429d045c154f574aa80a42290a0e0 259 Gene3D G3DSA:3.40.50.150 39 259 1.8E-74 T 12-10-2018 M892_10005 56c429d045c154f574aa80a42290a0e0 259 SUPERFAMILY SSF53335 26 257 6.04E-53 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M892_20130 762449197f84acd768ca74ff472be795 282 Gene3D G3DSA:2.60.120.10 143 249 6.1E-85 T 12-10-2018 IPR014710 RmlC-like jelly roll fold M892_20130 762449197f84acd768ca74ff472be795 282 PIRSF PIRSF006232 3 282 3.1E-83 T 12-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 M892_20130 762449197f84acd768ca74ff472be795 282 Pfam PF02678 Pirin 24 121 5.6E-32 T 12-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 M892_20130 762449197f84acd768ca74ff472be795 282 SUPERFAMILY SSF51182 5 280 2.25E-71 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily M892_20130 762449197f84acd768ca74ff472be795 282 Gene3D G3DSA:2.60.120.10 18 275 6.1E-85 T 12-10-2018 IPR014710 RmlC-like jelly roll fold M892_20130 762449197f84acd768ca74ff472be795 282 Pfam PF05726 Pirin C-terminal cupin domain 181 279 3.7E-27 T 12-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 M892_01110 c833823c3a1616ecbf77f5c95e3f6aa2 645 Gene3D G3DSA:3.40.720.10 272 568 4.4E-201 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 M892_01110 c833823c3a1616ecbf77f5c95e3f6aa2 645 Pfam PF00884 Sulfatase 281 551 1.4E-48 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 M892_01110 c833823c3a1616ecbf77f5c95e3f6aa2 645 Gene3D G3DSA:3.30.1120.80 244 640 4.4E-201 T 12-10-2018 M892_01110 c833823c3a1616ecbf77f5c95e3f6aa2 645 SUPERFAMILY SSF53649 279 602 3.79E-69 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 M892_01110 c833823c3a1616ecbf77f5c95e3f6aa2 645 PIRSF PIRSF005091 10 645 5.1E-101 T 12-10-2018 IPR012160 Lipoteichoic acid synthase-like M892_20455 e096d941d4a8632787c3d257c2b04afd 177 Pfam PF01161 Phosphatidylethanolamine-binding protein 41 175 3.5E-35 T 12-10-2018 IPR008914 Phosphatidylethanolamine-binding protein M892_20455 e096d941d4a8632787c3d257c2b04afd 177 SUPERFAMILY SSF49777 22 177 5.1E-48 T 12-10-2018 IPR036610 PEBP-like superfamily M892_20455 e096d941d4a8632787c3d257c2b04afd 177 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 45 175 2.7E-38 T 12-10-2018 IPR005247 YbhB/YbcL M892_20455 e096d941d4a8632787c3d257c2b04afd 177 Gene3D G3DSA:3.90.280.10 10 177 8.9E-52 T 12-10-2018 IPR036610 PEBP-like superfamily M892_17065 f8c6b91912721dc8f178d429b7693436 268 Gene3D G3DSA:3.20.20.70 1 268 1.9E-94 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M892_17065 f8c6b91912721dc8f178d429b7693436 268 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 12-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 M892_17065 f8c6b91912721dc8f178d429b7693436 268 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 265 38.15 T 12-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 M892_17065 f8c6b91912721dc8f178d429b7693436 268 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 263 1.0E-102 T 12-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 M892_17065 f8c6b91912721dc8f178d429b7693436 268 SUPERFAMILY SSF51366 1 266 9.42E-92 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 M892_17065 f8c6b91912721dc8f178d429b7693436 268 Pfam PF00290 Tryptophan synthase alpha chain 8 266 7.6E-101 T 12-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 M892_01955 ed658d5ea02f1e30130a8d2e36dba9e0 180 SUPERFAMILY SSF53098 1 166 2.35E-39 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_01955 ed658d5ea02f1e30130a8d2e36dba9e0 180 Gene3D G3DSA:1.10.246.40 1 65 1.9E-25 T 12-10-2018 IPR038215 Transposase, Tn5-like, N-terminal domain superfamily M892_01955 ed658d5ea02f1e30130a8d2e36dba9e0 180 Gene3D G3DSA:3.90.350.10 66 177 4.8E-20 T 12-10-2018 IPR014736 Transposase, Tn5-like, core M892_01955 ed658d5ea02f1e30130a8d2e36dba9e0 180 Pfam PF14706 Transposase DNA-binding 9 65 1.0E-17 T 12-10-2018 IPR014735 Transposase, Tn5-like, N-terminal M892_15580 ec02a4641a41b5517d4f41a83222846a 357 SUPERFAMILY SSF53098 108 356 1.37E-23 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_15580 ec02a4641a41b5517d4f41a83222846a 357 Pfam PF13006 Insertion element 4 transposase N-terminal 16 107 1.2E-24 T 12-10-2018 IPR024473 Transposase, IS4, N-terminal M892_15580 ec02a4641a41b5517d4f41a83222846a 357 Pfam PF01609 Transposase DDE domain 128 351 1.4E-23 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_13665 bc8ef160e132eec6896f35f3aae720b1 187 Gene3D G3DSA:1.10.530.10 22 181 2.9E-14 T 12-10-2018 M892_13665 bc8ef160e132eec6896f35f3aae720b1 187 SUPERFAMILY SSF53955 7 146 2.05E-21 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily M892_05240 306ffc93f19818e68c80134e2cbb4b9b 267 PRINTS PR00412 Epoxide hydrolase signature 24 42 2.7E-5 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 M892_05240 306ffc93f19818e68c80134e2cbb4b9b 267 PRINTS PR00412 Epoxide hydrolase signature 237 259 2.7E-5 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 M892_05240 306ffc93f19818e68c80134e2cbb4b9b 267 PRINTS PR00412 Epoxide hydrolase signature 205 221 2.7E-5 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 M892_05240 306ffc93f19818e68c80134e2cbb4b9b 267 Gene3D G3DSA:3.40.50.1820 7 264 5.1E-42 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_05240 306ffc93f19818e68c80134e2cbb4b9b 267 Pfam PF00561 alpha/beta hydrolase fold 19 121 4.6E-23 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 M892_05240 306ffc93f19818e68c80134e2cbb4b9b 267 SUPERFAMILY SSF53474 11 261 4.17E-45 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_12725 3a15b70ab0db8f54ca743c0843099312 574 SUPERFAMILY SSF160246 3 145 1.26E-39 T 12-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily M892_12725 3a15b70ab0db8f54ca743c0843099312 574 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 381 395 - T 12-10-2018 IPR001482 Type II/IV secretion system protein M892_12725 3a15b70ab0db8f54ca743c0843099312 574 SMART SM00382 314 435 2.2E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_12725 3a15b70ab0db8f54ca743c0843099312 574 Gene3D G3DSA:3.30.450.90 147 286 8.4E-44 T 12-10-2018 M892_12725 3a15b70ab0db8f54ca743c0843099312 574 Gene3D G3DSA:3.40.50.300 289 565 7.2E-100 T 12-10-2018 M892_12725 3a15b70ab0db8f54ca743c0843099312 574 Gene3D G3DSA:3.30.300.160 63 145 5.3E-6 T 12-10-2018 M892_12725 3a15b70ab0db8f54ca743c0843099312 574 SUPERFAMILY SSF52540 181 559 3.01E-92 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_12725 3a15b70ab0db8f54ca743c0843099312 574 Pfam PF00437 Type II/IV secretion system protein 189 453 1.3E-77 T 12-10-2018 IPR001482 Type II/IV secretion system protein M892_12725 3a15b70ab0db8f54ca743c0843099312 574 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 42 148 8.0E-23 T 12-10-2018 IPR007831 General secretory system II, protein E, N-terminal M892_15265 9ecf8df8ef8c7668fcc2ca768d44f177 439 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 24 435 6.7E-194 T 12-10-2018 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M892_15265 9ecf8df8ef8c7668fcc2ca768d44f177 439 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 21 437 1.7E-174 T 12-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M892_15265 9ecf8df8ef8c7668fcc2ca768d44f177 439 SUPERFAMILY SSF52540 93 362 3.92E-96 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_15265 9ecf8df8ef8c7668fcc2ca768d44f177 439 SMART SM00382 158 342 5.6E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_15265 9ecf8df8ef8c7668fcc2ca768d44f177 439 Gene3D G3DSA:3.40.50.12240 17 439 7.4E-156 T 12-10-2018 M892_15265 9ecf8df8ef8c7668fcc2ca768d44f177 439 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 146 357 1.7E-73 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M892_15265 9ecf8df8ef8c7668fcc2ca768d44f177 439 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 348 357 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M892_11350 35e63444ca47001667877409a25aa00e 266 SUPERFAMILY SSF53335 15 248 3.32E-37 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M892_11350 35e63444ca47001667877409a25aa00e 266 PIRSF PIRSF028177 2 266 1.5E-70 T 12-10-2018 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP GO:0017000|GO:1901106 M892_11350 35e63444ca47001667877409a25aa00e 266 Pfam PF04072 Leucine carboxyl methyltransferase 66 206 8.9E-9 T 12-10-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 M892_11350 35e63444ca47001667877409a25aa00e 266 Gene3D G3DSA:3.40.50.150 5 248 5.4E-21 T 12-10-2018 M892_14610 c6f5ce8a14c7c86f8c33cb3ff3f3c888 338 Gene3D G3DSA:3.10.350.10 3 86 7.5E-8 T 12-10-2018 IPR036779 LysM domain superfamily M892_14610 c6f5ce8a14c7c86f8c33cb3ff3f3c888 338 SMART SM00257 15 70 0.0024 T 12-10-2018 IPR018392 LysM domain M892_14610 c6f5ce8a14c7c86f8c33cb3ff3f3c888 338 Pfam PF01476 LysM domain 16 69 1.3E-7 T 12-10-2018 IPR018392 LysM domain M892_18035 1b214e9ae80c6c3df00ae165d26ce11f 271 SUPERFAMILY SSF54001 2 258 2.16E-73 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily M892_18035 1b214e9ae80c6c3df00ae165d26ce11f 271 Gene3D G3DSA:3.30.2140.10 6 253 9.0E-69 T 12-10-2018 M892_18035 1b214e9ae80c6c3df00ae165d26ce11f 271 Gene3D G3DSA:2.40.128.150 86 183 9.0E-69 T 12-10-2018 M892_18035 1b214e9ae80c6c3df00ae165d26ce11f 271 PRINTS PR01543 Arylamine N-acetyltransferase signature 100 125 2.5E-8 T 12-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 M892_18035 1b214e9ae80c6c3df00ae165d26ce11f 271 PRINTS PR01543 Arylamine N-acetyltransferase signature 46 69 2.5E-8 T 12-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 M892_18035 1b214e9ae80c6c3df00ae165d26ce11f 271 PRINTS PR01543 Arylamine N-acetyltransferase signature 22 45 2.5E-8 T 12-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 M892_18035 1b214e9ae80c6c3df00ae165d26ce11f 271 Pfam PF00797 N-acetyltransferase 23 258 3.4E-64 T 12-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 M892_08540 8ba42e4d9a9cbaeea00070362322b994 476 Gene3D G3DSA:3.40.50.620 322 474 3.5E-37 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M892_08540 8ba42e4d9a9cbaeea00070362322b994 476 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 7 312 3.1E-127 T 12-10-2018 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 M892_08540 8ba42e4d9a9cbaeea00070362322b994 476 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 332 472 3.1E-61 T 12-10-2018 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 M892_08540 8ba42e4d9a9cbaeea00070362322b994 476 Gene3D G3DSA:3.40.1190.20 6 310 5.9E-112 T 12-10-2018 IPR029056 Ribokinase-like M892_08540 8ba42e4d9a9cbaeea00070362322b994 476 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 474 42.872 T 12-10-2018 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 M892_08540 8ba42e4d9a9cbaeea00070362322b994 476 SUPERFAMILY SSF52374 340 471 3.94E-23 T 12-10-2018 M892_08540 8ba42e4d9a9cbaeea00070362322b994 476 SUPERFAMILY SSF53613 12 303 4.68E-59 T 12-10-2018 IPR029056 Ribokinase-like M892_08540 8ba42e4d9a9cbaeea00070362322b994 476 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 74 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 M892_08540 8ba42e4d9a9cbaeea00070362322b994 476 Pfam PF01467 Cytidylyltransferase-like 345 468 3.1E-14 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 M892_08540 8ba42e4d9a9cbaeea00070362322b994 476 Pfam PF00294 pfkB family carbohydrate kinase 13 303 2.4E-47 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB M892_08540 8ba42e4d9a9cbaeea00070362322b994 476 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 342 408 6.1E-18 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 M892_18140 4caa117894ef870a29e2647cdc58196c 495 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 13 491 1.7E-108 T 12-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 M892_18140 4caa117894ef870a29e2647cdc58196c 495 Gene3D G3DSA:1.20.1720.10 14 207 1.2E-45 T 12-10-2018 M892_18140 4caa117894ef870a29e2647cdc58196c 495 SUPERFAMILY SSF103473 11 492 7.46E-59 T 12-10-2018 IPR036259 MFS transporter superfamily M892_18140 4caa117894ef870a29e2647cdc58196c 495 Pfam PF07690 Major Facilitator Superfamily 17 408 3.4E-54 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 M892_18140 4caa117894ef870a29e2647cdc58196c 495 Gene3D G3DSA:1.20.1250.20 259 493 5.9E-13 T 12-10-2018 M892_05030 006f329a2940ee07b73ddd0e06f5dca2 806 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 464 577 8.7E-32 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_05030 006f329a2940ee07b73ddd0e06f5dca2 806 Gene3D G3DSA:3.40.50.2300 586 717 4.8E-31 T 12-10-2018 M892_05030 006f329a2940ee07b73ddd0e06f5dca2 806 Gene3D G3DSA:3.30.450.20 31 204 3.2E-19 T 12-10-2018 M892_05030 006f329a2940ee07b73ddd0e06f5dca2 806 Pfam PF00072 Response regulator receiver domain 601 712 1.6E-19 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_05030 006f329a2940ee07b73ddd0e06f5dca2 806 Pfam PF02743 Cache domain 133 243 9.1E-12 T 12-10-2018 IPR033479 Double Cache domain 1 M892_05030 006f329a2940ee07b73ddd0e06f5dca2 806 SUPERFAMILY SSF55874 406 577 1.15E-43 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_05030 006f329a2940ee07b73ddd0e06f5dca2 806 Pfam PF00512 His Kinase A (phospho-acceptor) domain 353 417 4.1E-18 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M892_05030 006f329a2940ee07b73ddd0e06f5dca2 806 Gene3D G3DSA:3.30.565.10 416 580 7.3E-47 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M892_05030 006f329a2940ee07b73ddd0e06f5dca2 806 SMART SM00448 598 712 2.3E-21 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_05030 006f329a2940ee07b73ddd0e06f5dca2 806 SUPERFAMILY SSF52172 596 725 7.54E-29 T 12-10-2018 IPR011006 CheY-like superfamily M892_05030 006f329a2940ee07b73ddd0e06f5dca2 806 PRINTS PR00344 Bacterial sensor protein C-terminal signature 563 576 4.5E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_05030 006f329a2940ee07b73ddd0e06f5dca2 806 PRINTS PR00344 Bacterial sensor protein C-terminal signature 522 532 4.5E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_05030 006f329a2940ee07b73ddd0e06f5dca2 806 PRINTS PR00344 Bacterial sensor protein C-terminal signature 539 557 4.5E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_05030 006f329a2940ee07b73ddd0e06f5dca2 806 PRINTS PR00344 Bacterial sensor protein C-terminal signature 504 518 4.5E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M892_05030 006f329a2940ee07b73ddd0e06f5dca2 806 SMART SM00387 464 579 2.0E-40 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M892_05030 006f329a2940ee07b73ddd0e06f5dca2 806 SMART SM00388 352 417 1.4E-23 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M892_05030 006f329a2940ee07b73ddd0e06f5dca2 806 SUPERFAMILY SSF47384 338 418 3.73E-19 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M892_05030 006f329a2940ee07b73ddd0e06f5dca2 806 Gene3D G3DSA:1.10.287.130 319 415 7.1E-26 T 12-10-2018 M892_04030 c829d1490729a0593d32804875e4cacf 533 Pfam PF03553 Na+/H+ antiporter family 165 497 8.3E-107 T 12-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 M892_24615 da87114cb01951bdd4481215f7ef7457 104 Pfam PF01541 GIY-YIG catalytic domain 9 79 9.0E-18 T 12-10-2018 IPR000305 GIY-YIG endonuclease M892_24615 da87114cb01951bdd4481215f7ef7457 104 SUPERFAMILY SSF82771 8 79 1.7E-14 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 M892_24615 da87114cb01951bdd4481215f7ef7457 104 SMART SM00465 8 86 1.0E-4 T 12-10-2018 IPR000305 GIY-YIG endonuclease M892_24615 da87114cb01951bdd4481215f7ef7457 104 Gene3D G3DSA:3.40.1440.10 3 98 4.2E-29 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 M892_22995 f89848ca060f1b42d6f28dc44a6b39d4 409 Pfam PF00990 Diguanylate cyclase, GGDEF domain 358 402 2.1E-6 T 12-10-2018 IPR000160 GGDEF domain M892_22995 f89848ca060f1b42d6f28dc44a6b39d4 409 Pfam PF00990 Diguanylate cyclase, GGDEF domain 233 341 1.3E-22 T 12-10-2018 IPR000160 GGDEF domain M892_22995 f89848ca060f1b42d6f28dc44a6b39d4 409 SMART SM00267 222 407 7.4E-36 T 12-10-2018 IPR000160 GGDEF domain M892_22995 f89848ca060f1b42d6f28dc44a6b39d4 409 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 231 339 2.5E-23 T 12-10-2018 IPR000160 GGDEF domain M892_22995 f89848ca060f1b42d6f28dc44a6b39d4 409 SUPERFAMILY SSF55073 238 406 1.65E-33 T 12-10-2018 IPR029787 Nucleotide cyclase M892_22995 f89848ca060f1b42d6f28dc44a6b39d4 409 Gene3D G3DSA:3.30.70.270 225 407 4.7E-45 T 12-10-2018 M892_17995 8e5fad8386ec514a66985908415839f0 265 Pfam PF08282 haloacid dehalogenase-like hydrolase 9 260 3.9E-58 T 12-10-2018 M892_17995 8e5fad8386ec514a66985908415839f0 265 Gene3D G3DSA:3.30.1240.10 85 190 3.0E-77 T 12-10-2018 M892_17995 8e5fad8386ec514a66985908415839f0 265 SUPERFAMILY SSF56784 4 264 1.63E-65 T 12-10-2018 IPR036412 HAD-like superfamily M892_17995 8e5fad8386ec514a66985908415839f0 265 Gene3D G3DSA:3.40.50.1000 9 260 3.0E-77 T 12-10-2018 IPR023214 HAD superfamily M892_17995 8e5fad8386ec514a66985908415839f0 265 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 9 233 7.2E-19 T 12-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 M892_17995 8e5fad8386ec514a66985908415839f0 265 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 9 260 1.7E-49 T 12-10-2018 IPR000150 Cof family GO:0016787 M892_15390 8ccddb00740ee7b3939a0cab49f12dbc 222 Pfam PF03379 CcmB protein 5 219 5.4E-90 T 12-10-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 M892_15390 8ccddb00740ee7b3939a0cab49f12dbc 222 PIRSF PIRSF002764 1 222 1.1E-84 T 12-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria M892_15390 8ccddb00740ee7b3939a0cab49f12dbc 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 29 50 5.6E-70 T 12-10-2018 M892_15390 8ccddb00740ee7b3939a0cab49f12dbc 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 103 121 5.6E-70 T 12-10-2018 M892_15390 8ccddb00740ee7b3939a0cab49f12dbc 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 78 101 5.6E-70 T 12-10-2018 M892_15390 8ccddb00740ee7b3939a0cab49f12dbc 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 158 177 5.6E-70 T 12-10-2018 M892_15390 8ccddb00740ee7b3939a0cab49f12dbc 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 55 72 5.6E-70 T 12-10-2018 M892_15390 8ccddb00740ee7b3939a0cab49f12dbc 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 195 218 5.6E-70 T 12-10-2018 M892_15390 8ccddb00740ee7b3939a0cab49f12dbc 222 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 8 218 3.0E-91 T 12-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria M892_01190 3d27d70b3e627941e5a27142f031cc1b 482 SUPERFAMILY SSF50494 160 344 6.08E-25 T 12-10-2018 IPR009003 Peptidase S1, PA clan M892_01190 3d27d70b3e627941e5a27142f031cc1b 482 Pfam PF13365 Trypsin-like peptidase domain 180 339 4.6E-11 T 12-10-2018 M892_01190 3d27d70b3e627941e5a27142f031cc1b 482 PRINTS PR00839 V8 serine protease family signature 181 198 3.4E-5 T 12-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 M892_01190 3d27d70b3e627941e5a27142f031cc1b 482 PRINTS PR00839 V8 serine protease family signature 331 343 3.4E-5 T 12-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 M892_01190 3d27d70b3e627941e5a27142f031cc1b 482 PRINTS PR00839 V8 serine protease family signature 313 329 3.4E-5 T 12-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 M892_01190 3d27d70b3e627941e5a27142f031cc1b 482 Gene3D G3DSA:2.40.10.10 303 363 2.4E-7 T 12-10-2018 M892_01190 3d27d70b3e627941e5a27142f031cc1b 482 Gene3D G3DSA:2.40.10.10 170 302 2.3E-6 T 12-10-2018 M892_01190 3d27d70b3e627941e5a27142f031cc1b 482 Gene3D G3DSA:2.60.120.380 384 480 3.0E-21 T 12-10-2018 M892_01170 19a3f9764b577e4a809fde43bcc1635d 474 Pfam PF00696 Amino acid kinase family 4 293 2.3E-23 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 M892_01170 19a3f9764b577e4a809fde43bcc1635d 474 Gene3D G3DSA:3.40.1160.10 3 308 1.3E-57 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily M892_01170 19a3f9764b577e4a809fde43bcc1635d 474 SUPERFAMILY SSF55021 398 464 1.3E-9 T 12-10-2018 M892_01170 19a3f9764b577e4a809fde43bcc1635d 474 SUPERFAMILY SSF53633 5 307 3.14E-55 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily M892_01170 19a3f9764b577e4a809fde43bcc1635d 474 Gene3D G3DSA:3.30.2130.10 311 466 3.0E-11 T 12-10-2018 M892_06165 0a8fbf92002dbefb5a54971735d88cce 644 Pfam PF04851 Type III restriction enzyme, res subunit 22 239 1.1E-5 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 M892_06165 0a8fbf92002dbefb5a54971735d88cce 644 SUPERFAMILY SSF52540 45 604 2.37E-11 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_06165 0a8fbf92002dbefb5a54971735d88cce 644 SMART SM00487 20 313 0.004 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain M892_06165 0a8fbf92002dbefb5a54971735d88cce 644 Gene3D G3DSA:3.40.50.300 448 640 3.2E-36 T 12-10-2018 M892_06165 0a8fbf92002dbefb5a54971735d88cce 644 Pfam PF13307 Helicase C-terminal domain 465 622 6.4E-34 T 12-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 M892_06165 0a8fbf92002dbefb5a54971735d88cce 644 Gene3D G3DSA:3.40.50.300 22 290 1.1E-49 T 12-10-2018 M892_06165 0a8fbf92002dbefb5a54971735d88cce 644 SUPERFAMILY SSF52540 17 239 1.01E-24 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_06165 0a8fbf92002dbefb5a54971735d88cce 644 SMART SM00491 480 609 3.6E-45 T 12-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 M892_26640 d8f4ccd827f66fb09eca4e7663ba5f78 86 Pfam PF03891 Domain of unknown function (DUF333) 35 78 3.3E-16 T 12-10-2018 IPR005590 Protein of unknown function DUF333 M892_17120 6427387c3b1d9e2197cc9a8c64af2ea9 106 Gene3D G3DSA:3.10.450.140 5 105 1.0E-42 T 12-10-2018 IPR036763 Putative dsDNA mimic superfamily M892_17120 6427387c3b1d9e2197cc9a8c64af2ea9 106 SUPERFAMILY SSF102816 3 105 7.59E-50 T 12-10-2018 IPR036763 Putative dsDNA mimic superfamily M892_17120 6427387c3b1d9e2197cc9a8c64af2ea9 106 Pfam PF04269 Protein of unknown function, DUF440 5 105 2.0E-45 T 12-10-2018 IPR007376 dsDNA mimic, putative M892_17120 6427387c3b1d9e2197cc9a8c64af2ea9 106 Hamap MF_00680 UPF0263 protein YciU [yciU]. 1 106 36.649 T 12-10-2018 IPR007376 dsDNA mimic, putative M892_17120 6427387c3b1d9e2197cc9a8c64af2ea9 106 ProDom PD020447 UPF0263 YCIU HD0986 VV1228 UNCHARACTERIZED 3D-STRUCTURE VV13059 BCR PM0536 VC1208 8 104 1.0E-49 T 12-10-2018 IPR007376 dsDNA mimic, putative M892_17120 6427387c3b1d9e2197cc9a8c64af2ea9 106 PIRSF PIRSF004916 1 105 1.6E-52 T 12-10-2018 IPR007376 dsDNA mimic, putative M892_18965 66f36ba562e344127adfd6a1ef5a5a56 272 Gene3D G3DSA:1.10.260.40 5 104 4.5E-8 T 12-10-2018 M892_18965 66f36ba562e344127adfd6a1ef5a5a56 272 SUPERFAMILY SSF47413 3 73 1.04E-7 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 M892_12290 ea5a41767e210e5aa3a76bda163c6921 75 Pfam PF04102 SlyX 9 75 9.1E-24 T 12-10-2018 IPR007236 SlyX M892_12290 ea5a41767e210e5aa3a76bda163c6921 75 Gene3D G3DSA:1.20.5.300 2 51 5.3E-7 T 12-10-2018 M892_12290 ea5a41767e210e5aa3a76bda163c6921 75 Hamap MF_00715 Protein SlyX [slyX]. 8 75 17.417 T 12-10-2018 IPR007236 SlyX M892_22475 76f7d85f69123c9f28d8195930dd91b6 145 Pfam PF13551 Winged helix-turn helix 32 87 4.7E-9 T 12-10-2018 M892_22475 76f7d85f69123c9f28d8195930dd91b6 145 SUPERFAMILY SSF46689 16 131 1.85E-26 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_22475 76f7d85f69123c9f28d8195930dd91b6 145 Pfam PF13592 Winged helix-turn helix 98 135 6.2E-11 T 12-10-2018 IPR025959 Winged helix-turn helix domain M892_08730 65b96df7f2677e7969918f98d6b3105d 253 ProSitePatterns PS00894 DeoR-type HTH domain signature. 9 43 - T 12-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 M892_08730 65b96df7f2677e7969918f98d6b3105d 253 Pfam PF08220 DeoR-like helix-turn-helix domain 9 62 4.2E-15 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 M892_08730 65b96df7f2677e7969918f98d6b3105d 253 SMART SM01134 73 234 2.3E-57 T 12-10-2018 M892_08730 65b96df7f2677e7969918f98d6b3105d 253 Gene3D G3DSA:1.10.10.10 1 56 3.5E-5 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_08730 65b96df7f2677e7969918f98d6b3105d 253 Pfam PF00455 DeoR C terminal sensor domain 77 232 6.5E-45 T 12-10-2018 IPR014036 DeoR C-terminal sensor domain M892_08730 65b96df7f2677e7969918f98d6b3105d 253 SUPERFAMILY SSF100950 78 234 6.03E-31 T 12-10-2018 IPR037171 NagB/RpiA transferase-like M892_08730 65b96df7f2677e7969918f98d6b3105d 253 SUPERFAMILY SSF46785 4 66 2.21E-12 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_08730 65b96df7f2677e7969918f98d6b3105d 253 SMART SM00420 9 61 1.5E-13 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 M892_08730 65b96df7f2677e7969918f98d6b3105d 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 27 41 2.3E-6 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 M892_08730 65b96df7f2677e7969918f98d6b3105d 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 41 59 2.3E-6 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 M892_18400 a2aadcb13c9e2dd00fb11c2970db172d 461 Pfam PF01523 Putative modulator of DNA gyrase 21 314 2.6E-61 T 12-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 M892_18400 a2aadcb13c9e2dd00fb11c2970db172d 461 PIRSF PIRSF004919 1 461 2.7E-115 T 12-10-2018 IPR025502 TldD M892_18400 a2aadcb13c9e2dd00fb11c2970db172d 461 SUPERFAMILY SSF111283 7 459 4.32E-113 T 12-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 M892_18400 a2aadcb13c9e2dd00fb11c2970db172d 461 Gene3D G3DSA:3.30.2290.10 3 221 3.1E-19 T 12-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal M892_14180 d98f5f2d6a29f4c4cb8d0d176d848896 132 Pfam PF03603 DNA polymerase III psi subunit 4 130 4.4E-38 T 12-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M892_14180 d98f5f2d6a29f4c4cb8d0d176d848896 132 Gene3D G3DSA:3.40.50.10220 35 132 1.4E-30 T 12-10-2018 IPR036654 DNA polymerase III, psi subunit superfamily GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M892_14180 d98f5f2d6a29f4c4cb8d0d176d848896 132 SUPERFAMILY SSF102220 33 131 8.76E-29 T 12-10-2018 IPR036654 DNA polymerase III, psi subunit superfamily GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M892_14180 d98f5f2d6a29f4c4cb8d0d176d848896 132 ProDom PD032475 DNA POLYMERASE PSI SUBUNIT III TRANSFERASE NUCLEOTIDYLTRANSFERASE III 3D-STRUCTURE DNA-DIRECTED 56 128 9.0E-7 T 12-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M892_14180 d98f5f2d6a29f4c4cb8d0d176d848896 132 PIRSF PIRSF029225 2 132 3.4E-44 T 12-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M892_05285 c1a4e9c0b34ec3772bb75807e248c62a 233 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 107 226 1.9E-31 T 12-10-2018 IPR007472 N-end rule aminoacyl transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 M892_05285 c1a4e9c0b34ec3772bb75807e248c62a 233 PIRSF PIRSF037208 1 233 4.0E-85 T 12-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 M892_05285 c1a4e9c0b34ec3772bb75807e248c62a 233 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 16 86 8.7E-20 T 12-10-2018 IPR007471 N-end aminoacyl transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 M892_05285 c1a4e9c0b34ec3772bb75807e248c62a 233 SUPERFAMILY SSF55729 81 232 5.95E-22 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_05285 c1a4e9c0b34ec3772bb75807e248c62a 233 Hamap MF_00689 Aspartate/glutamate leucyltransferase [bpt]. 6 232 36.424 T 12-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 M892_07310 20c04e844f8f1ef1ccadb0e20dfd2d00 459 Gene3D G3DSA:1.10.246.40 1 65 1.5E-24 T 12-10-2018 IPR038215 Transposase, Tn5-like, N-terminal domain superfamily M892_07310 20c04e844f8f1ef1ccadb0e20dfd2d00 459 Gene3D G3DSA:3.90.350.10 66 347 8.8E-80 T 12-10-2018 IPR014736 Transposase, Tn5-like, core M892_07310 20c04e844f8f1ef1ccadb0e20dfd2d00 459 Gene3D G3DSA:1.10.740.10 348 458 1.7E-41 T 12-10-2018 IPR014737 Transposase, Tn5-like, C-terminal M892_07310 20c04e844f8f1ef1ccadb0e20dfd2d00 459 Pfam PF01609 Transposase DDE domain 223 357 3.7E-5 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_07310 20c04e844f8f1ef1ccadb0e20dfd2d00 459 Pfam PF14706 Transposase DNA-binding 9 65 4.0E-16 T 12-10-2018 IPR014735 Transposase, Tn5-like, N-terminal M892_07310 20c04e844f8f1ef1ccadb0e20dfd2d00 459 Pfam PF02281 Transposase Tn5 dimerisation domain 369 454 1.9E-17 T 12-10-2018 IPR003201 Transposase Tn5, dimerisation M892_07310 20c04e844f8f1ef1ccadb0e20dfd2d00 459 SUPERFAMILY SSF53098 1 458 3.11E-130 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_00455 8b52e9cdc6bbb15b446da3028c7a2923 574 SUPERFAMILY SSF90123 7 322 1.57E-40 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 M892_00455 8b52e9cdc6bbb15b446da3028c7a2923 574 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 6 534 1.7E-135 T 12-10-2018 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0016021|GO:0034775|GO:0042626|GO:0045454 M892_00455 8b52e9cdc6bbb15b446da3028c7a2923 574 SUPERFAMILY SSF52540 337 572 4.41E-72 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_00455 8b52e9cdc6bbb15b446da3028c7a2923 574 ProSitePatterns PS00211 ABC transporters family signature. 476 490 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_00455 8b52e9cdc6bbb15b446da3028c7a2923 574 SMART SM00382 366 550 8.7E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_00455 8b52e9cdc6bbb15b446da3028c7a2923 574 Pfam PF00664 ABC transporter transmembrane region 62 272 3.2E-10 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 M892_00455 8b52e9cdc6bbb15b446da3028c7a2923 574 Pfam PF00005 ABC transporter 357 503 7.4E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_00455 8b52e9cdc6bbb15b446da3028c7a2923 574 Gene3D G3DSA:3.40.50.300 327 574 6.4E-76 T 12-10-2018 M892_00455 8b52e9cdc6bbb15b446da3028c7a2923 574 Gene3D G3DSA:1.20.1560.10 1 321 2.8E-27 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 M892_08770 b3f75d97257290459d703abef5a57ea9 348 Pfam PF13528 Glycosyl transferase family 1 1 300 1.9E-37 T 12-10-2018 M892_08770 b3f75d97257290459d703abef5a57ea9 348 TIGRFAM TIGR00661 MJ1255: conserved hypothetical protein 2 311 4.7E-104 T 12-10-2018 IPR005262 Conserved hypothetical protein CHP00661 M892_08770 b3f75d97257290459d703abef5a57ea9 348 Gene3D G3DSA:3.40.50.2000 196 315 7.0E-6 T 12-10-2018 M892_08770 b3f75d97257290459d703abef5a57ea9 348 SUPERFAMILY SSF53756 1 298 1.33E-10 T 12-10-2018 M892_06285 8d630c2909cd7d9dfcbfe5577aac5b1c 252 Gene3D G3DSA:3.40.1390.30 97 223 1.2E-82 T 12-10-2018 M892_06285 8d630c2909cd7d9dfcbfe5577aac5b1c 252 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 251 9.7E-71 T 12-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 M892_06285 8d630c2909cd7d9dfcbfe5577aac5b1c 252 Gene3D G3DSA:3.40.1390.30 14 237 1.2E-82 T 12-10-2018 M892_06285 8d630c2909cd7d9dfcbfe5577aac5b1c 252 SUPERFAMILY SSF102705 1 251 1.57E-83 T 12-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily M892_06285 8d630c2909cd7d9dfcbfe5577aac5b1c 252 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 6 238 1.6E-59 T 12-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 M892_01925 db34bf67df00625e50215cbb6f35fea8 256 SUPERFAMILY SSF161098 4 254 4.95E-55 T 12-10-2018 IPR035906 MetI-like superfamily M892_01925 db34bf67df00625e50215cbb6f35fea8 256 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 251 1.3E-18 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M892_01925 db34bf67df00625e50215cbb6f35fea8 256 Gene3D G3DSA:1.10.3720.10 4 256 1.7E-47 T 12-10-2018 IPR035906 MetI-like superfamily M892_10655 e49b2f51502894568fb363131790dafc 258 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 34 254 1.4E-37 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M892_10655 e49b2f51502894568fb363131790dafc 258 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 57 70 - T 12-10-2018 IPR018313 Solute-binding protein family 3, conserved site M892_10655 e49b2f51502894568fb363131790dafc 258 Gene3D G3DSA:3.40.190.10 30 252 4.2E-63 T 12-10-2018 M892_10655 e49b2f51502894568fb363131790dafc 258 Gene3D G3DSA:3.40.190.10 120 215 4.2E-63 T 12-10-2018 M892_10655 e49b2f51502894568fb363131790dafc 258 SUPERFAMILY SSF53850 1 256 7.06E-51 T 12-10-2018 M892_10655 e49b2f51502894568fb363131790dafc 258 SMART SM00062 33 257 4.8E-39 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M892_10105 a0b6ddf1d0f33f85b72a90ecca7e2850 264 Pfam PF03050 Transposase IS66 family 2 217 6.9E-73 T 12-10-2018 IPR004291 Transposase, IS66 M892_10105 a0b6ddf1d0f33f85b72a90ecca7e2850 264 Pfam PF13817 IS66 C-terminal element 224 260 3.1E-8 T 12-10-2018 IPR039552 Transposase IS66, C-terminal M892_02965 5ee28fd6b3c5c98e02d2a2ed1ed8e54e 153 ProDom PD049902 METHYLTRANSFERASE TRANSFERASE PRECURSOR ISOPRENYLCYSTEINE SIGNAL CARBOXYL TRANSMEMBRANE MEMBRANE FAMILY XCC3183 109 153 6.0E-17 T 12-10-2018 M892_02965 5ee28fd6b3c5c98e02d2a2ed1ed8e54e 153 Gene3D G3DSA:1.20.120.1630 3 153 3.0E-25 T 12-10-2018 M892_02965 5ee28fd6b3c5c98e02d2a2ed1ed8e54e 153 Pfam PF04191 Phospholipid methyltransferase 42 142 2.4E-14 T 12-10-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 M892_00775 de3f4b49e830316f46c26d3b69d3d240 69 Gene3D G3DSA:1.10.3210.10 1 64 2.6E-7 T 12-10-2018 M892_25685 e0d0f38f86aea43788d87a4a814ec127 128 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 78 127 0.001 T 12-10-2018 M892_25685 e0d0f38f86aea43788d87a4a814ec127 128 Pfam PF11742 Protein of unknown function (DUF3302) 3 78 1.4E-40 T 12-10-2018 IPR011223 Uncharacterised conserved protein UCP028770 M892_25685 e0d0f38f86aea43788d87a4a814ec127 128 PIRSF PIRSF028770 1 128 8.9E-70 T 12-10-2018 IPR011223 Uncharacterised conserved protein UCP028770 M892_14850 ab9fa4c8e39a2dc1e4ef2f7ff86a9b45 161 Gene3D G3DSA:3.40.630.30 10 151 1.2E-25 T 12-10-2018 M892_14850 ab9fa4c8e39a2dc1e4ef2f7ff86a9b45 161 SUPERFAMILY SSF55729 28 139 2.32E-23 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_14850 ab9fa4c8e39a2dc1e4ef2f7ff86a9b45 161 Pfam PF13302 Acetyltransferase (GNAT) domain 27 132 2.9E-19 T 12-10-2018 IPR000182 GNAT domain M892_11590 de6f655eebc00d81c085d80f4680f887 232 Pfam PF07356 Protein of unknown function (DUF1481) 34 228 7.3E-59 T 12-10-2018 IPR010858 Protein of unknown function DUF1481 M892_11590 de6f655eebc00d81c085d80f4680f887 232 PIRSF PIRSF028160 1 232 1.3E-119 T 12-10-2018 IPR016872 Uncharacterised conserved protein UCP028160 M892_13865 16474beaa9f2d5ffccdbf7e6cdac6e3c 238 Gene3D G3DSA:2.40.50.580 1 80 6.6E-29 T 12-10-2018 M892_13865 16474beaa9f2d5ffccdbf7e6cdac6e3c 238 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 238 56.587 T 12-10-2018 IPR005224 Sugar fermentation stimulation protein M892_13865 16474beaa9f2d5ffccdbf7e6cdac6e3c 238 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 4 230 4.8E-78 T 12-10-2018 IPR005224 Sugar fermentation stimulation protein M892_13865 16474beaa9f2d5ffccdbf7e6cdac6e3c 238 Gene3D G3DSA:3.40.1350.60 81 237 3.4E-54 T 12-10-2018 M892_13865 16474beaa9f2d5ffccdbf7e6cdac6e3c 238 Pfam PF03749 Sugar fermentation stimulation protein 13 229 1.5E-75 T 12-10-2018 IPR005224 Sugar fermentation stimulation protein M892_19215 47fa74a15c73cf122b9194c7de9006eb 365 Pfam PF01594 AI-2E family transporter 8 331 2.9E-32 T 12-10-2018 IPR002549 Transmembrane protein TqsA-like M892_12785 6da99e163439c181df8fc632ab084b69 162 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 9 154 1.6E-36 T 12-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 M892_12785 6da99e163439c181df8fc632ab084b69 162 Pfam PF04093 rod shape-determining protein MreD 9 154 4.3E-40 T 12-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 M892_12785 6da99e163439c181df8fc632ab084b69 162 PIRSF PIRSF018472 1 162 1.2E-41 T 12-10-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type M892_06935 7e9224d54e23e114585e10e00f0e1b52 468 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 M892_06935 7e9224d54e23e114585e10e00f0e1b52 468 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 7 460 9.1E-208 T 12-10-2018 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 KEGG: 00500+2.7.1.201 M892_06935 7e9224d54e23e114585e10e00f0e1b52 468 Pfam PF00367 phosphotransferase system, EIIB 11 43 5.0E-14 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 M892_06935 7e9224d54e23e114585e10e00f0e1b52 468 Pfam PF02378 Phosphotransferase system, EIIC 112 404 6.2E-34 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 M892_06935 7e9224d54e23e114585e10e00f0e1b52 468 Gene3D G3DSA:3.30.1360.60 3 78 3.7E-24 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 M892_06935 7e9224d54e23e114585e10e00f0e1b52 468 SUPERFAMILY SSF55604 9 81 4.18E-21 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 M892_06935 7e9224d54e23e114585e10e00f0e1b52 468 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 30 111 3.6E-17 T 12-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 M892_18690 67363d3cb72fae216f4b96aef61fef05 236 SUPERFAMILY SSF51695 3 234 1.97E-65 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 M892_18690 67363d3cb72fae216f4b96aef61fef05 236 Gene3D G3DSA:3.20.20.190 1 236 1.1E-68 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 M892_18690 67363d3cb72fae216f4b96aef61fef05 236 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 8 231 7.5E-38 T 12-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 M892_27550 e6dfa03d199f71b9ac43653d4f5479c7 463 Pfam PF13533 Biotin-lipoyl like 75 108 3.8E-5 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain M892_27550 e6dfa03d199f71b9ac43653d4f5479c7 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 428 443 1.1E-46 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 M892_27550 e6dfa03d199f71b9ac43653d4f5479c7 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 443 463 1.1E-46 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 M892_27550 e6dfa03d199f71b9ac43653d4f5479c7 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 329 350 1.1E-46 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 M892_27550 e6dfa03d199f71b9ac43653d4f5479c7 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 82 102 1.1E-46 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 M892_27550 e6dfa03d199f71b9ac43653d4f5479c7 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 386 409 1.1E-46 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 M892_27550 e6dfa03d199f71b9ac43653d4f5479c7 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 40 63 1.1E-46 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 M892_27550 e6dfa03d199f71b9ac43653d4f5479c7 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 362 386 1.1E-46 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 M892_27550 e6dfa03d199f71b9ac43653d4f5479c7 463 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 31 463 2.0E-133 T 12-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 M892_27550 e6dfa03d199f71b9ac43653d4f5479c7 463 SUPERFAMILY SSF56954 170 258 2.62E-6 T 12-10-2018 M892_27550 e6dfa03d199f71b9ac43653d4f5479c7 463 Gene3D G3DSA:2.40.50.100 69 103 1.9E-8 T 12-10-2018 M892_27550 e6dfa03d199f71b9ac43653d4f5479c7 463 ProSitePatterns PS00543 HlyD family secretion proteins signature. 428 450 - T 12-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 M892_27550 e6dfa03d199f71b9ac43653d4f5479c7 463 Pfam PF13437 HlyD family secretion protein 316 423 9.9E-18 T 12-10-2018 M892_27550 e6dfa03d199f71b9ac43653d4f5479c7 463 Gene3D G3DSA:1.10.287.470 104 134 1.9E-8 T 12-10-2018 M892_27550 e6dfa03d199f71b9ac43653d4f5479c7 463 Gene3D G3DSA:2.40.30.170 58 68 1.9E-8 T 12-10-2018 M892_19885 ad7a04fc608a51c01631846ff1467af1 230 SUPERFAMILY SSF49354 16 156 1.57E-9 T 12-10-2018 IPR008962 PapD-like superfamily M892_14200 ffa9c0ac582ecb0e068034684dbd2f0d 257 SUPERFAMILY SSF51556 2 253 1.86E-73 T 12-10-2018 IPR032466 Metal-dependent hydrolase M892_14200 ffa9c0ac582ecb0e068034684dbd2f0d 257 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 12-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 M892_14200 ffa9c0ac582ecb0e068034684dbd2f0d 257 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 12-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 M892_14200 ffa9c0ac582ecb0e068034684dbd2f0d 257 Pfam PF01026 TatD related DNase 4 253 6.2E-61 T 12-10-2018 IPR001130 TatD family GO:0016788 M892_14200 ffa9c0ac582ecb0e068034684dbd2f0d 257 Gene3D G3DSA:3.20.20.140 1 255 2.6E-78 T 12-10-2018 M892_14200 ffa9c0ac582ecb0e068034684dbd2f0d 257 PIRSF PIRSF005902 1 257 2.9E-63 T 12-10-2018 IPR001130 TatD family GO:0016788 M892_12860 df83520777b58e9f3164b632597bf784 91 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 3 84 6.3E-22 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like M892_12860 df83520777b58e9f3164b632597bf784 91 SUPERFAMILY SSF55594 4 90 6.41E-25 T 12-10-2018 IPR035895 HPr-like superfamily M892_12860 df83520777b58e9f3164b632597bf784 91 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 41 56 - T 12-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site M892_12860 df83520777b58e9f3164b632597bf784 91 PRINTS PR00107 Phosphocarrier protein signature 40 55 1.2E-9 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like M892_12860 df83520777b58e9f3164b632597bf784 91 PRINTS PR00107 Phosphocarrier protein signature 14 30 1.2E-9 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like M892_12860 df83520777b58e9f3164b632597bf784 91 PRINTS PR00107 Phosphocarrier protein signature 55 72 1.2E-9 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like M892_12860 df83520777b58e9f3164b632597bf784 91 Gene3D G3DSA:3.30.1340.10 1 85 4.4E-27 T 12-10-2018 IPR035895 HPr-like superfamily M892_12860 df83520777b58e9f3164b632597bf784 91 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 14 21 - T 12-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site M892_12860 df83520777b58e9f3164b632597bf784 91 Pfam PF00381 PTS HPr component phosphorylation site 4 84 6.3E-24 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like M892_07340 d1c252b14bf3965c12d3ad9534170dfa 84 SUPERFAMILY SSF47413 1 67 7.32E-13 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 M892_07340 d1c252b14bf3965c12d3ad9534170dfa 84 SMART SM00530 10 65 1.6E-6 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 M892_07340 d1c252b14bf3965c12d3ad9534170dfa 84 Pfam PF13560 Helix-turn-helix domain 7 61 2.2E-8 T 12-10-2018 M892_07340 d1c252b14bf3965c12d3ad9534170dfa 84 Gene3D G3DSA:1.10.260.40 1 76 3.7E-13 T 12-10-2018 M892_09485 86da5ec77d4ee9a7f47a9b2325676296 167 SUPERFAMILY SSF55729 4 163 3.12E-15 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_09485 86da5ec77d4ee9a7f47a9b2325676296 167 Pfam PF13302 Acetyltransferase (GNAT) domain 4 139 2.0E-8 T 12-10-2018 IPR000182 GNAT domain M892_09485 86da5ec77d4ee9a7f47a9b2325676296 167 Gene3D G3DSA:3.40.630.30 2 153 2.3E-16 T 12-10-2018 M892_06255 eadcc63a9cea16ffd2ec8dd60a44632b 236 Gene3D G3DSA:3.10.20.30 1 104 6.4E-33 T 12-10-2018 IPR012675 Beta-grasp domain superfamily M892_06255 eadcc63a9cea16ffd2ec8dd60a44632b 236 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 8 228 2.2E-85 T 12-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 M892_06255 eadcc63a9cea16ffd2ec8dd60a44632b 236 Gene3D G3DSA:1.10.1060.10 105 236 1.1E-55 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 M892_06255 eadcc63a9cea16ffd2ec8dd60a44632b 236 SUPERFAMILY SSF46548 105 233 4.88E-40 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 M892_06255 eadcc63a9cea16ffd2ec8dd60a44632b 236 Pfam PF13534 4Fe-4S dicluster domain 146 219 1.5E-10 T 12-10-2018 M892_06255 eadcc63a9cea16ffd2ec8dd60a44632b 236 SUPERFAMILY SSF54292 1 104 3.39E-29 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 M892_06255 eadcc63a9cea16ffd2ec8dd60a44632b 236 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 5 109 1.4E-29 T 12-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 M892_06255 eadcc63a9cea16ffd2ec8dd60a44632b 236 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 147 158 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M892_23105 b095940c3e731b47bbf7dc5568a40650 97 Gene3D G3DSA:1.10.10.10 2 97 5.3E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_23105 b095940c3e731b47bbf7dc5568a40650 97 Pfam PF01022 Bacterial regulatory protein, arsR family 21 66 4.3E-9 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M892_23105 b095940c3e731b47bbf7dc5568a40650 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 63 78 2.7E-8 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M892_23105 b095940c3e731b47bbf7dc5568a40650 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 48 63 2.7E-8 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M892_23105 b095940c3e731b47bbf7dc5568a40650 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 16 31 2.7E-8 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M892_23105 b095940c3e731b47bbf7dc5568a40650 97 SMART SM00418 14 91 9.2E-16 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M892_23105 b095940c3e731b47bbf7dc5568a40650 97 SUPERFAMILY SSF46785 9 95 1.86E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_01435 772139f7a41c4cfc9850ae6247b1c1e6 380 SUPERFAMILY SSF48256 14 380 1.44E-124 T 12-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 M892_01435 772139f7a41c4cfc9850ae6247b1c1e6 380 Gene3D G3DSA:1.10.580.10 36 360 9.3E-117 T 12-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 M892_01435 772139f7a41c4cfc9850ae6247b1c1e6 380 Gene3D G3DSA:1.10.230.10 229 327 9.3E-117 T 12-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain M892_01435 772139f7a41c4cfc9850ae6247b1c1e6 380 Pfam PF00285 Citrate synthase, C-terminal domain 15 362 6.9E-113 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 M892_01435 772139f7a41c4cfc9850ae6247b1c1e6 380 PRINTS PR00143 Citrate synthase signature 203 231 7.3E-36 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 M892_01435 772139f7a41c4cfc9850ae6247b1c1e6 380 PRINTS PR00143 Citrate synthase signature 130 143 7.3E-36 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 M892_01435 772139f7a41c4cfc9850ae6247b1c1e6 380 PRINTS PR00143 Citrate synthase signature 181 196 7.3E-36 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 M892_01435 772139f7a41c4cfc9850ae6247b1c1e6 380 PRINTS PR00143 Citrate synthase signature 256 276 7.3E-36 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 M892_01435 772139f7a41c4cfc9850ae6247b1c1e6 380 PRINTS PR00143 Citrate synthase signature 313 329 7.3E-36 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 M892_01435 772139f7a41c4cfc9850ae6247b1c1e6 380 PRINTS PR00143 Citrate synthase signature 333 347 7.3E-36 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 M892_01435 772139f7a41c4cfc9850ae6247b1c1e6 380 PIRSF PIRSF001369 7 380 1.1E-115 T 12-10-2018 IPR024176 Citrate synthase, bacterial-type M892_01435 772139f7a41c4cfc9850ae6247b1c1e6 380 ProSitePatterns PS00480 Citrate synthase signature. 263 275 - T 12-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 M892_01435 772139f7a41c4cfc9850ae6247b1c1e6 380 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 15 380 2.7E-160 T 12-10-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 M892_01570 15ddb2350ef970805c6b3e51b4349358 109 SUPERFAMILY SSF69721 2 109 1.12E-40 T 12-10-2018 IPR025526 DsrC-like domain superfamily M892_01570 15ddb2350ef970805c6b3e51b4349358 109 PIRSF PIRSF006223 2 109 3.7E-40 T 12-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE M892_01570 15ddb2350ef970805c6b3e51b4349358 109 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 4 109 3.1E-49 T 12-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE M892_01570 15ddb2350ef970805c6b3e51b4349358 109 Gene3D G3DSA:3.30.1420.10 2 38 1.8E-12 T 12-10-2018 M892_01570 15ddb2350ef970805c6b3e51b4349358 109 Gene3D G3DSA:1.10.10.370 39 109 1.4E-30 T 12-10-2018 M892_01570 15ddb2350ef970805c6b3e51b4349358 109 Pfam PF04358 DsrC like protein 4 109 1.2E-43 T 12-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE M892_18890 ef000abe4bdddb1775a1d3e9fba75f8f 436 Pfam PF05525 Branched-chain amino acid transport protein 5 423 1.1E-112 T 12-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 M892_18890 ef000abe4bdddb1775a1d3e9fba75f8f 436 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 11 410 3.6E-103 T 12-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 M892_20450 a8ace839939bac8d5d0ef79a2bafb905 120 SUPERFAMILY SSF55298 1 116 7.07E-27 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 M892_20450 a8ace839939bac8d5d0ef79a2bafb905 120 Pfam PF01042 Endoribonuclease L-PSP 33 114 4.9E-20 T 12-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 M892_20450 a8ace839939bac8d5d0ef79a2bafb905 120 Gene3D G3DSA:3.30.1330.40 1 118 7.7E-30 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 M892_20640 d988a6c24f7dc52560956b66078d6291 279 SUPERFAMILY SSF103481 178 275 7.19E-9 T 12-10-2018 M892_20640 d988a6c24f7dc52560956b66078d6291 279 SUPERFAMILY SSF103481 33 131 3.01E-8 T 12-10-2018 M892_20640 d988a6c24f7dc52560956b66078d6291 279 Pfam PF00892 EamA-like transporter family 140 271 4.2E-9 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M892_18670 1dcd45977930bf73b6c1f36a3346c122 118 Gene3D G3DSA:3.30.1370.150 59 118 4.5E-29 T 12-10-2018 M892_18670 1dcd45977930bf73b6c1f36a3346c122 118 Pfam PF10928 Protein of unknown function (DUF2810) 65 116 2.2E-29 T 12-10-2018 IPR021230 Protein of unknown function DUF2810 M892_10820 368a29f509d836b4411ac927ecc48dc5 305 Pfam PF01218 Coproporphyrinogen III oxidase 9 305 8.1E-132 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 M892_10820 368a29f509d836b4411ac927ecc48dc5 305 SUPERFAMILY SSF102886 5 305 7.06E-138 T 12-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 M892_10820 368a29f509d836b4411ac927ecc48dc5 305 Gene3D G3DSA:3.40.1500.10 1 305 1.6E-137 T 12-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 M892_10820 368a29f509d836b4411ac927ecc48dc5 305 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 3 281 56.203 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 M892_10820 368a29f509d836b4411ac927ecc48dc5 305 PIRSF PIRSF000166 2 305 9.6E-129 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 M892_10820 368a29f509d836b4411ac927ecc48dc5 305 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 170 194 - T 12-10-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 M892_10820 368a29f509d836b4411ac927ecc48dc5 305 PRINTS PR00073 Coprogen oxidase signature 31 47 3.3E-70 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 M892_10820 368a29f509d836b4411ac927ecc48dc5 305 PRINTS PR00073 Coprogen oxidase signature 166 195 3.3E-70 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 M892_10820 368a29f509d836b4411ac927ecc48dc5 305 PRINTS PR00073 Coprogen oxidase signature 238 265 3.3E-70 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 M892_10820 368a29f509d836b4411ac927ecc48dc5 305 PRINTS PR00073 Coprogen oxidase signature 94 118 3.3E-70 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 M892_10820 368a29f509d836b4411ac927ecc48dc5 305 PRINTS PR00073 Coprogen oxidase signature 129 151 3.3E-70 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 M892_10820 368a29f509d836b4411ac927ecc48dc5 305 PRINTS PR00073 Coprogen oxidase signature 266 292 3.3E-70 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 M892_03295 122c0a184ab80ddd50aa837400f80a0f 212 Gene3D G3DSA:2.60.220.40 113 185 1.2E-5 T 12-10-2018 M892_03295 122c0a184ab80ddd50aa837400f80a0f 212 Gene3D G3DSA:2.40.50.230 22 111 1.9E-22 T 12-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily M892_03295 122c0a184ab80ddd50aa837400f80a0f 212 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 30 207 3.7E-22 T 12-10-2018 IPR013046 Phage baseplate assembly protein V/Gp45 M892_03295 122c0a184ab80ddd50aa837400f80a0f 212 Pfam PF04717 Type VI secretion system, phage-baseplate injector 29 141 4.7E-28 T 12-10-2018 IPR006531 Gp5 N-terminal M892_15170 84fe49d1773e372d689c06eb4458f120 117 Pfam PF11169 Protein of unknown function (DUF2956) 12 114 3.3E-42 T 12-10-2018 IPR021339 Protein of unknown function DUF2956 M892_09965 f508ff67e0216481af5f852829f2fd85 144 SUPERFAMILY SSF55729 1 128 1.03E-16 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_09965 f508ff67e0216481af5f852829f2fd85 144 Pfam PF00583 Acetyltransferase (GNAT) family 33 104 1.6E-6 T 12-10-2018 IPR000182 GNAT domain M892_09965 f508ff67e0216481af5f852829f2fd85 144 Gene3D G3DSA:3.40.630.30 2 143 6.7E-14 T 12-10-2018 M892_07260 150265dbc7adb791f02e4db6582470b1 128 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 1 21 8.4E-6 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M892_07260 150265dbc7adb791f02e4db6582470b1 128 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 21 1.7E-4 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M892_07260 150265dbc7adb791f02e4db6582470b1 128 Gene3D G3DSA:3.30.700.10 2 128 6.6E-18 T 12-10-2018 M892_07260 150265dbc7adb791f02e4db6582470b1 128 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 22 106 2.9E-8 T 12-10-2018 IPR031982 Type IV minor pilin ComP M892_07260 150265dbc7adb791f02e4db6582470b1 128 SUPERFAMILY SSF54523 1 122 7.85E-16 T 12-10-2018 M892_05895 3ac3356e3aa21078f001fb0bddd91737 264 SUPERFAMILY SSF53474 16 261 1.39E-40 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_05895 3ac3356e3aa21078f001fb0bddd91737 264 Pfam PF12697 Alpha/beta hydrolase family 21 252 1.9E-15 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 M892_05895 3ac3356e3aa21078f001fb0bddd91737 264 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 19 260 1.2E-82 T 12-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 M892_05895 3ac3356e3aa21078f001fb0bddd91737 264 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 13 260 34.26 T 12-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 M892_05895 3ac3356e3aa21078f001fb0bddd91737 264 Gene3D G3DSA:3.40.50.1820 11 261 2.1E-62 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_01520 334e37fc7786aa3eb38504b658a031d7 514 Pfam PF03050 Transposase IS66 family 184 467 8.8E-95 T 12-10-2018 IPR004291 Transposase, IS66 M892_01520 334e37fc7786aa3eb38504b658a031d7 514 Pfam PF13817 IS66 C-terminal element 474 510 7.6E-8 T 12-10-2018 IPR039552 Transposase IS66, C-terminal M892_01520 334e37fc7786aa3eb38504b658a031d7 514 Pfam PF13007 Transposase C of IS166 homeodomain 42 112 2.2E-14 T 12-10-2018 IPR024463 Transposase TnpC, homeodomain M892_01520 334e37fc7786aa3eb38504b658a031d7 514 Pfam PF13005 zinc-finger binding domain of transposase IS66 120 164 1.6E-16 T 12-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 M892_24850 c0b6ef50b84d223ba3d86e01c8845e74 77 SUPERFAMILY SSF52266 1 72 4.4E-6 T 12-10-2018 M892_11280 813164ba5f5b358b36dac65b48d14619 199 Gene3D G3DSA:3.40.50.150 6 198 2.5E-62 T 12-10-2018 M892_11280 813164ba5f5b358b36dac65b48d14619 199 PIRSF PIRSF004553 18 198 6.7E-54 T 12-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 M892_11280 813164ba5f5b358b36dac65b48d14619 199 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 131 137 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 M892_11280 813164ba5f5b358b36dac65b48d14619 199 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 17 196 3.7E-58 T 12-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 M892_11280 813164ba5f5b358b36dac65b48d14619 199 SUPERFAMILY SSF53335 19 196 1.38E-53 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M892_11280 813164ba5f5b358b36dac65b48d14619 199 Pfam PF03602 Conserved hypothetical protein 95 19 195 9.2E-61 T 12-10-2018 M892_19900 437575374a00553e1928f23742f81d11 236 Gene3D G3DSA:3.30.930.10 5 235 9.6E-41 T 12-10-2018 M892_19900 437575374a00553e1928f23742f81d11 236 SUPERFAMILY SSF55681 4 233 2.49E-45 T 12-10-2018 M892_16220 d0ed415402805cf28aa81c2dc542b0c2 85 Pfam PF02597 ThiS family 4 85 1.9E-19 T 12-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 M892_16220 d0ed415402805cf28aa81c2dc542b0c2 85 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 85 5.9E-19 T 12-10-2018 M892_16220 d0ed415402805cf28aa81c2dc542b0c2 85 Gene3D G3DSA:3.10.20.30 1 85 4.4E-22 T 12-10-2018 IPR012675 Beta-grasp domain superfamily M892_16220 d0ed415402805cf28aa81c2dc542b0c2 85 SUPERFAMILY SSF54285 1 85 3.36E-19 T 12-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp M892_18975 fa66647f502b4226cb9c6c85215853c9 202 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 22 196 2.0E-29 T 12-10-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like M892_18975 fa66647f502b4226cb9c6c85215853c9 202 Gene3D G3DSA:2.60.120.590 7 201 1.1E-65 T 12-10-2018 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily M892_18975 fa66647f502b4226cb9c6c85215853c9 202 SUPERFAMILY SSF51197 11 198 1.83E-65 T 12-10-2018 M892_01255 93d25c3b827601f7acdf052639ad97c7 463 Gene3D G3DSA:1.20.1600.10 23 450 1.0E-64 T 12-10-2018 M892_01255 93d25c3b827601f7acdf052639ad97c7 463 Pfam PF02321 Outer membrane efflux protein 28 234 9.0E-27 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 M892_01255 93d25c3b827601f7acdf052639ad97c7 463 Pfam PF02321 Outer membrane efflux protein 257 438 1.2E-24 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 M892_01255 93d25c3b827601f7acdf052639ad97c7 463 SUPERFAMILY SSF56954 6 438 2.75E-69 T 12-10-2018 M892_25625 98011345b46cc11a390b9cb73d9831e3 447 Pfam PF00270 DEAD/DEAH box helicase 29 200 9.6E-48 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 M892_25625 98011345b46cc11a390b9cb73d9831e3 447 SMART SM00487 24 227 2.0E-52 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain M892_25625 98011345b46cc11a390b9cb73d9831e3 447 Gene3D G3DSA:3.40.50.300 1 216 5.4E-73 T 12-10-2018 M892_25625 98011345b46cc11a390b9cb73d9831e3 447 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 156 164 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site M892_25625 98011345b46cc11a390b9cb73d9831e3 447 Gene3D G3DSA:3.40.50.300 218 429 6.8E-51 T 12-10-2018 M892_25625 98011345b46cc11a390b9cb73d9831e3 447 SMART SM00490 264 345 1.7E-30 T 12-10-2018 IPR001650 Helicase, C-terminal M892_25625 98011345b46cc11a390b9cb73d9831e3 447 SUPERFAMILY SSF52540 77 364 1.29E-68 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_25625 98011345b46cc11a390b9cb73d9831e3 447 Pfam PF00271 Helicase conserved C-terminal domain 239 345 7.1E-30 T 12-10-2018 IPR001650 Helicase, C-terminal M892_08900 bef64ddcf65a1d0c70b674551d3fd3e7 322 SUPERFAMILY SSF53850 25 321 6.09E-89 T 12-10-2018 M892_08900 bef64ddcf65a1d0c70b674551d3fd3e7 322 Pfam PF16868 NMT1-like family 30 319 4.0E-98 T 12-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family M892_08900 bef64ddcf65a1d0c70b674551d3fd3e7 322 Gene3D G3DSA:3.40.190.10 117 255 1.1E-111 T 12-10-2018 M892_08900 bef64ddcf65a1d0c70b674551d3fd3e7 322 Gene3D G3DSA:3.40.190.10 30 319 1.1E-111 T 12-10-2018 M892_08900 bef64ddcf65a1d0c70b674551d3fd3e7 322 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 7 319 3.4E-114 T 12-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family M892_03965 728497ea0491942038d0f8c29109862f 192 Gene3D G3DSA:3.40.50.300 2 140 1.3E-24 T 12-10-2018 M892_03965 728497ea0491942038d0f8c29109862f 192 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 34.795 T 12-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 M892_03965 728497ea0491942038d0f8c29109862f 192 SUPERFAMILY SSF52540 2 141 6.94E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_03965 728497ea0491942038d0f8c29109862f 192 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 173 186 - T 12-10-2018 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 M892_03965 728497ea0491942038d0f8c29109862f 192 PIRSF PIRSF035805 1 192 6.0E-57 T 12-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 M892_03965 728497ea0491942038d0f8c29109862f 192 Pfam PF00265 Thymidine kinase 2 186 1.3E-59 T 12-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 M892_03965 728497ea0491942038d0f8c29109862f 192 SUPERFAMILY SSF57716 142 190 1.57E-16 T 12-10-2018 M892_03965 728497ea0491942038d0f8c29109862f 192 Gene3D G3DSA:3.30.60.20 144 189 1.2E-7 T 12-10-2018 M892_18835 a5340363b18c70a4f6efb645e46ab1e3 301 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 3 286 1.7E-85 T 12-10-2018 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 Reactome: R-HSA-70614 M892_18835 a5340363b18c70a4f6efb645e46ab1e3 301 Gene3D G3DSA:3.30.1490.20 115 181 2.9E-26 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 M892_18835 a5340363b18c70a4f6efb645e46ab1e3 301 Gene3D G3DSA:3.30.470.80 182 299 4.3E-43 T 12-10-2018 M892_18835 a5340363b18c70a4f6efb645e46ab1e3 301 SUPERFAMILY SSF56059 98 288 1.77E-50 T 12-10-2018 M892_18835 a5340363b18c70a4f6efb645e46ab1e3 301 Gene3D G3DSA:3.40.50.20 1 114 4.6E-41 T 12-10-2018 M892_18835 a5340363b18c70a4f6efb645e46ab1e3 301 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 52.443 T 12-10-2018 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK M892_18835 a5340363b18c70a4f6efb645e46ab1e3 301 Pfam PF08443 RimK-like ATP-grasp domain 98 286 3.4E-68 T 12-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 M892_27920 8e168c2c96a3e18a8fca8ff5e7addab8 117 Pfam PF04219 Protein of unknown function, DUF 12 100 4.1E-36 T 12-10-2018 IPR007335 Protein of unknown function DUF413 M892_03995 7ea7cbd2c23a636da9bbfa7a11654f3a 257 SUPERFAMILY SSF51366 1 256 4.63E-74 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 M892_03995 7ea7cbd2c23a636da9bbfa7a11654f3a 257 Pfam PF00977 Histidine biosynthesis protein 5 239 4.6E-79 T 12-10-2018 IPR006062 Histidine biosynthesis GO:0000105 M892_03995 7ea7cbd2c23a636da9bbfa7a11654f3a 257 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 1.0E-114 T 12-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 M892_03995 7ea7cbd2c23a636da9bbfa7a11654f3a 257 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 44.874 T 12-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 M892_03995 7ea7cbd2c23a636da9bbfa7a11654f3a 257 Gene3D G3DSA:3.20.20.70 1 257 5.4E-95 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M892_19000 eb5d1388f47b446c97be746f655a62a7 460 Gene3D G3DSA:1.25.40.80 146 304 1.2E-46 T 12-10-2018 M892_19000 eb5d1388f47b446c97be746f655a62a7 460 Gene3D G3DSA:1.10.579.10 306 455 8.9E-52 T 12-10-2018 M892_19000 eb5d1388f47b446c97be746f655a62a7 460 SUPERFAMILY SSF52425 12 198 5.49E-34 T 12-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 M892_19000 eb5d1388f47b446c97be746f655a62a7 460 Pfam PF00875 DNA photolyase 17 179 9.4E-24 T 12-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 M892_19000 eb5d1388f47b446c97be746f655a62a7 460 TIGRFAM TIGR02765 crypto_DASH: cryptochrome, DASH family 15 429 4.6E-169 T 12-10-2018 IPR014133 Cryptochrome DASH GO:0003913|GO:0006281 M892_19000 eb5d1388f47b446c97be746f655a62a7 460 SUPERFAMILY SSF48173 204 433 2.88E-71 T 12-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 M892_19000 eb5d1388f47b446c97be746f655a62a7 460 Pfam PF03441 FAD binding domain of DNA photolyase 284 428 1.2E-41 T 12-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 M892_19000 eb5d1388f47b446c97be746f655a62a7 460 Gene3D G3DSA:3.40.50.620 15 142 2.4E-21 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M892_19000 eb5d1388f47b446c97be746f655a62a7 460 PRINTS PR00147 DNA photolyase signature 331 347 2.5E-11 T 12-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 M892_19000 eb5d1388f47b446c97be746f655a62a7 460 PRINTS PR00147 DNA photolyase signature 351 369 2.5E-11 T 12-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 M892_19000 eb5d1388f47b446c97be746f655a62a7 460 PRINTS PR00147 DNA photolyase signature 390 404 2.5E-11 T 12-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 M892_21955 38d437d45cc303ffdb7970b539d7ef20 954 Pfam PF02347 Glycine cleavage system P-protein 458 734 2.7E-8 T 12-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 M892_21955 38d437d45cc303ffdb7970b539d7ef20 954 Pfam PF02347 Glycine cleavage system P-protein 17 438 1.9E-178 T 12-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 M892_21955 38d437d45cc303ffdb7970b539d7ef20 954 Gene3D G3DSA:3.40.640.10 95 353 7.7E-104 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M892_21955 38d437d45cc303ffdb7970b539d7ef20 954 Gene3D G3DSA:3.40.640.10 522 748 7.0E-58 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M892_21955 38d437d45cc303ffdb7970b539d7ef20 954 SUPERFAMILY SSF53383 17 437 4.62E-100 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M892_21955 38d437d45cc303ffdb7970b539d7ef20 954 Gene3D G3DSA:3.90.1150.10 760 895 5.4E-42 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M892_21955 38d437d45cc303ffdb7970b539d7ef20 954 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 17 946 0.0 T 12-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 M892_21955 38d437d45cc303ffdb7970b539d7ef20 954 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 8 952 25.696 T 12-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 M892_21955 38d437d45cc303ffdb7970b539d7ef20 954 SUPERFAMILY SSF53383 453 947 1.44E-98 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M892_09950 edc7cb859f3404a65887596f4332a354 205 Gene3D G3DSA:1.10.760.10 109 205 1.6E-26 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M892_09950 edc7cb859f3404a65887596f4332a354 205 Gene3D G3DSA:1.10.760.10 19 108 9.1E-27 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M892_09950 edc7cb859f3404a65887596f4332a354 205 PIRSF PIRSF000005 1 205 1.2E-65 T 12-10-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 M892_09950 edc7cb859f3404a65887596f4332a354 205 Pfam PF00034 Cytochrome c 25 103 1.4E-9 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_09950 edc7cb859f3404a65887596f4332a354 205 Pfam PF00034 Cytochrome c 116 201 4.5E-9 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_09950 edc7cb859f3404a65887596f4332a354 205 SUPERFAMILY SSF46626 114 203 8.25E-20 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M892_09950 edc7cb859f3404a65887596f4332a354 205 SUPERFAMILY SSF46626 6 105 1.25E-21 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M892_02200 372c29cc69978005fe0d49aa770fc1ae 229 Gene3D G3DSA:3.40.50.300 5 197 1.5E-22 T 12-10-2018 M892_02200 372c29cc69978005fe0d49aa770fc1ae 229 Pfam PF13500 AAA domain 24 205 9.6E-7 T 12-10-2018 M892_02200 372c29cc69978005fe0d49aa770fc1ae 229 SUPERFAMILY SSF52540 24 206 1.32E-16 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_07010 8f5ac9f00d2367e81f7ced118bd48699 458 Pfam PF14793 Domain of unknown function (DUF4478) 4 109 4.6E-50 T 12-10-2018 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 M892_07010 8f5ac9f00d2367e81f7ced118bd48699 458 Gene3D G3DSA:3.30.1850.10 1 120 9.6E-57 T 12-10-2018 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 M892_07010 8f5ac9f00d2367e81f7ced118bd48699 458 Pfam PF03641 Possible lysine decarboxylase 187 326 1.2E-35 T 12-10-2018 IPR031100 LOG family M892_07010 8f5ac9f00d2367e81f7ced118bd48699 458 Pfam PF11892 Domain of unknown function (DUF3412) 330 450 1.2E-55 T 12-10-2018 IPR021826 Domain of unknown function DUF3412 KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 M892_07010 8f5ac9f00d2367e81f7ced118bd48699 458 Gene3D G3DSA:3.40.50.450 121 450 1.9E-124 T 12-10-2018 M892_07010 8f5ac9f00d2367e81f7ced118bd48699 458 SUPERFAMILY SSF102405 119 327 3.21E-42 T 12-10-2018 M892_01025 a97b5386cd7ddae462e6f9e8da28d9e5 147 Gene3D G3DSA:3.10.180.10 1 129 8.5E-35 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M892_01025 a97b5386cd7ddae462e6f9e8da28d9e5 147 ProSitePatterns PS00934 Glyoxalase I signature 1. 7 28 - T 12-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 M892_01025 a97b5386cd7ddae462e6f9e8da28d9e5 147 SUPERFAMILY SSF54593 1 129 1.48E-27 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M892_01025 a97b5386cd7ddae462e6f9e8da28d9e5 147 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 109 1.3E-10 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain M892_12780 27b2a4a724c86c97ebfd9caaf1c19af4 296 Gene3D G3DSA:2.40.10.340 122 266 7.1E-37 T 12-10-2018 M892_12780 27b2a4a724c86c97ebfd9caaf1c19af4 296 Gene3D G3DSA:2.40.10.350 180 257 7.1E-37 T 12-10-2018 M892_12780 27b2a4a724c86c97ebfd9caaf1c19af4 296 PIRSF PIRSF038471 2 283 2.7E-83 T 12-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 M892_12780 27b2a4a724c86c97ebfd9caaf1c19af4 296 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 274 1.2E-90 T 12-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 M892_12780 27b2a4a724c86c97ebfd9caaf1c19af4 296 Pfam PF04085 rod shape-determining protein MreC 123 269 2.0E-40 T 12-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 M892_03880 15afe37cf4ff2c8cd5c14f97cf86e6b9 301 Gene3D G3DSA:3.90.1640.10 1 186 2.6E-63 T 12-10-2018 M892_03880 15afe37cf4ff2c8cd5c14f97cf86e6b9 301 SMART SM01131 178 300 1.3E-32 T 12-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 M892_03880 15afe37cf4ff2c8cd5c14f97cf86e6b9 301 Gene3D G3DSA:3.10.310.20 187 300 2.2E-22 T 12-10-2018 IPR038222 DHHA2 domain superfamily KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 M892_03880 15afe37cf4ff2c8cd5c14f97cf86e6b9 301 SUPERFAMILY SSF64182 1 298 1.96E-66 T 12-10-2018 IPR038763 DHH phosphoesterase superfamily M892_03880 15afe37cf4ff2c8cd5c14f97cf86e6b9 301 Pfam PF02833 DHHA2 domain 180 297 1.1E-14 T 12-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 M892_03880 15afe37cf4ff2c8cd5c14f97cf86e6b9 301 Pfam PF01368 DHH family 2 142 4.9E-22 T 12-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 M892_27125 b696e55efcbdc3e6be6f683bfd45f066 663 Pfam PF01136 Peptidase family U32 447 605 2.3E-7 T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 M892_27125 b696e55efcbdc3e6be6f683bfd45f066 663 Pfam PF01136 Peptidase family U32 78 293 9.7E-64 T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 M892_16260 ff30669a67a2c73c3b104d12d2575c4f 398 PIRSF PIRSF000722 1 397 4.7E-145 T 12-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 M892_16260 ff30669a67a2c73c3b104d12d2575c4f 398 SUPERFAMILY SSF53067 3 195 6.41E-63 T 12-10-2018 M892_16260 ff30669a67a2c73c3b104d12d2575c4f 398 Gene3D G3DSA:3.30.420.40 195 397 3.8E-82 T 12-10-2018 M892_16260 ff30669a67a2c73c3b104d12d2575c4f 398 Gene3D G3DSA:3.30.420.40 2 194 1.1E-71 T 12-10-2018 M892_16260 ff30669a67a2c73c3b104d12d2575c4f 398 Pfam PF00871 Acetokinase family 5 390 5.6E-163 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 M892_16260 ff30669a67a2c73c3b104d12d2575c4f 398 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 12-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 M892_16260 ff30669a67a2c73c3b104d12d2575c4f 398 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 202 219 - T 12-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 M892_16260 ff30669a67a2c73c3b104d12d2575c4f 398 Hamap MF_00020 Acetate kinase [ackA]. 1 398 186.042 T 12-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 M892_16260 ff30669a67a2c73c3b104d12d2575c4f 398 SUPERFAMILY SSF53067 156 395 4.95E-85 T 12-10-2018 M892_16260 ff30669a67a2c73c3b104d12d2575c4f 398 PRINTS PR00471 Acetate kinase family signature 172 185 3.0E-45 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 M892_16260 ff30669a67a2c73c3b104d12d2575c4f 398 PRINTS PR00471 Acetate kinase family signature 377 389 3.0E-45 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 M892_16260 ff30669a67a2c73c3b104d12d2575c4f 398 PRINTS PR00471 Acetate kinase family signature 298 311 3.0E-45 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 M892_16260 ff30669a67a2c73c3b104d12d2575c4f 398 PRINTS PR00471 Acetate kinase family signature 202 223 3.0E-45 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 M892_16260 ff30669a67a2c73c3b104d12d2575c4f 398 PRINTS PR00471 Acetate kinase family signature 321 337 3.0E-45 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 M892_16260 ff30669a67a2c73c3b104d12d2575c4f 398 PRINTS PR00471 Acetate kinase family signature 5 16 3.0E-45 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 M892_16260 ff30669a67a2c73c3b104d12d2575c4f 398 TIGRFAM TIGR00016 ackA: acetate kinase 2 396 4.2E-169 T 12-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 M892_12180 8ca76482ade1f683aab08e6447d9e5af 141 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 12-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site M892_12180 8ca76482ade1f683aab08e6447d9e5af 141 Hamap MF_01177 HTH-type transcriptional repressor NsrR [nsrR]. 1 141 44.346 T 12-10-2018 IPR023761 Transcriptional repressor HTH, NsrR GO:0045892 M892_12180 8ca76482ade1f683aab08e6447d9e5af 141 Pfam PF02082 Transcriptional regulator 1 82 6.4E-24 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type M892_12180 8ca76482ade1f683aab08e6447d9e5af 141 Gene3D G3DSA:1.10.10.10 1 136 7.2E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_12180 8ca76482ade1f683aab08e6447d9e5af 141 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 128 3.6E-36 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type M892_12180 8ca76482ade1f683aab08e6447d9e5af 141 SUPERFAMILY SSF46785 2 131 1.59E-30 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_11365 f054660a4696dc447a2c0ca628a4be9f 210 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site M892_11365 f054660a4696dc447a2c0ca628a4be9f 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 58 1.1E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M892_11365 f054660a4696dc447a2c0ca628a4be9f 210 Gene3D G3DSA:1.10.10.60 2 52 2.4E-23 T 12-10-2018 M892_11365 f054660a4696dc447a2c0ca628a4be9f 210 Gene3D G3DSA:1.10.357.10 53 207 7.0E-37 T 12-10-2018 M892_11365 f054660a4696dc447a2c0ca628a4be9f 210 SUPERFAMILY SSF46689 2 77 2.46E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_27345 bcada5e6f03d9a60217e3fbcc2ac6adc 440 SUPERFAMILY SSF56925 123 293 7.59E-7 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel M892_14390 e0ff039f2453be77e79eb2d7b2606d58 379 TIGRFAM TIGR00937 2A51: chromate efflux transporter 8 372 1.8E-88 T 12-10-2018 IPR014047 Chromate transporter, long chain M892_14390 e0ff039f2453be77e79eb2d7b2606d58 379 PIRSF PIRSF004810 1 379 1.9E-113 T 12-10-2018 IPR014047 Chromate transporter, long chain M892_14390 e0ff039f2453be77e79eb2d7b2606d58 379 Pfam PF02417 Chromate transporter 3 168 2.7E-31 T 12-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 M892_14390 e0ff039f2453be77e79eb2d7b2606d58 379 Pfam PF02417 Chromate transporter 212 374 1.7E-34 T 12-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 M892_28470 bc9f44faffe433d0ef3534ae8c6c5c40 251 Pfam PF04335 VirB8 protein 36 246 7.6E-41 T 12-10-2018 IPR007430 Bacterial virulence protein VirB8 GO:0016020 M892_28470 bc9f44faffe433d0ef3534ae8c6c5c40 251 SUPERFAMILY SSF54427 107 246 1.23E-31 T 12-10-2018 IPR032710 NTF2-like domain superfamily M892_28470 bc9f44faffe433d0ef3534ae8c6c5c40 251 Gene3D G3DSA:3.10.450.230 104 251 7.0E-40 T 12-10-2018 M892_28470 bc9f44faffe433d0ef3534ae8c6c5c40 251 PIRSF PIRSF003299 21 250 9.5E-49 T 12-10-2018 IPR026264 Type IV secretion system protein VirB8/PtlE GO:0030255 M892_12230 6bf80f7e362b6274315dddfde12b95a5 263 Gene3D G3DSA:3.10.180.50 3 239 9.9E-95 T 12-10-2018 M892_12230 6bf80f7e362b6274315dddfde12b95a5 263 Pfam PF07063 Domain of unknown function (DUF1338) 31 116 1.4E-19 T 12-10-2018 IPR009770 Domain of unknown function DUF1338 M892_12230 6bf80f7e362b6274315dddfde12b95a5 263 Pfam PF07063 Domain of unknown function (DUF1338) 136 261 2.6E-27 T 12-10-2018 IPR009770 Domain of unknown function DUF1338 M892_12230 6bf80f7e362b6274315dddfde12b95a5 263 SMART SM01150 3 262 2.1E-120 T 12-10-2018 IPR009770 Domain of unknown function DUF1338 M892_17950 c5875b9d5c6f1911ae5a2ac877f25677 157 Gene3D G3DSA:3.40.190.10 40 138 4.2E-27 T 12-10-2018 M892_17950 c5875b9d5c6f1911ae5a2ac877f25677 157 Gene3D G3DSA:3.40.190.10 139 156 4.2E-27 T 12-10-2018 M892_17950 c5875b9d5c6f1911ae5a2ac877f25677 157 Pfam PF01547 Bacterial extracellular solute-binding protein 37 156 1.7E-18 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein M892_17950 c5875b9d5c6f1911ae5a2ac877f25677 157 SUPERFAMILY SSF53850 33 156 7.25E-28 T 12-10-2018 M892_14535 3aa392f001a79f26b452343ef71807e1 284 ProSitePatterns PS00221 MIP family signature. 68 76 - T 12-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 M892_14535 3aa392f001a79f26b452343ef71807e1 284 PRINTS PR00783 Major intrinsic protein family signature 235 255 1.9E-51 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 M892_14535 3aa392f001a79f26b452343ef71807e1 284 PRINTS PR00783 Major intrinsic protein family signature 153 171 1.9E-51 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 M892_14535 3aa392f001a79f26b452343ef71807e1 284 PRINTS PR00783 Major intrinsic protein family signature 87 106 1.9E-51 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 M892_14535 3aa392f001a79f26b452343ef71807e1 284 PRINTS PR00783 Major intrinsic protein family signature 11 30 1.9E-51 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 M892_14535 3aa392f001a79f26b452343ef71807e1 284 PRINTS PR00783 Major intrinsic protein family signature 186 208 1.9E-51 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 M892_14535 3aa392f001a79f26b452343ef71807e1 284 PRINTS PR00783 Major intrinsic protein family signature 50 74 1.9E-51 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 M892_14535 3aa392f001a79f26b452343ef71807e1 284 Pfam PF00230 Major intrinsic protein 6 252 3.1E-64 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 M892_14535 3aa392f001a79f26b452343ef71807e1 284 Gene3D G3DSA:1.20.1080.10 4 260 2.0E-98 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 M892_14535 3aa392f001a79f26b452343ef71807e1 284 SUPERFAMILY SSF81338 9 254 3.14E-75 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 M892_14535 3aa392f001a79f26b452343ef71807e1 284 TIGRFAM TIGR00861 MIP: MIP family channel proteins 15 252 1.2E-69 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 M892_26780 a5982bc540df6f5623e235fce2393e33 418 SUPERFAMILY SSF52266 146 408 1.83E-23 T 12-10-2018 M892_26780 a5982bc540df6f5623e235fce2393e33 418 Gene3D G3DSA:3.40.50.1110 134 414 3.2E-40 T 12-10-2018 IPR036514 SGNH hydrolase superfamily M892_26780 a5982bc540df6f5623e235fce2393e33 418 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 147 404 2.1E-17 T 12-10-2018 IPR001087 GDSL lipase/esterase GO:0016788 M892_26780 a5982bc540df6f5623e235fce2393e33 418 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 147 158 - T 12-10-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 M892_22955 157b6f504686219e31eeb5e98c886197 373 Pfam PF13729 F plasmid transfer operon, TraF, protein 49 289 2.8E-64 T 12-10-2018 IPR032811 Putative conjugal transfer protein TraF-related M892_02690 088557dc14f592c40667ff9f6559c5e9 231 Pfam PF08732 HIM1 80 176 1.7E-9 T 12-10-2018 IPR014843 Protein Him1/Fmp52 M892_02690 088557dc14f592c40667ff9f6559c5e9 231 SUPERFAMILY SSF51735 5 217 1.4E-31 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_02690 088557dc14f592c40667ff9f6559c5e9 231 Gene3D G3DSA:3.40.50.720 1 231 1.1E-46 T 12-10-2018 M892_18155 b5c0c1dc8c71fdeab071f27cb2c32edc 255 SUPERFAMILY SSF46785 96 153 7.39E-5 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_18155 b5c0c1dc8c71fdeab071f27cb2c32edc 255 SUPERFAMILY SSF47413 6 64 4.55E-5 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 M892_17905 dbad9ed9fe57530fabdbe79a18ebef2c 94 Gene3D G3DSA:2.60.120.10 1 94 1.7E-34 T 12-10-2018 IPR014710 RmlC-like jelly roll fold M892_17905 dbad9ed9fe57530fabdbe79a18ebef2c 94 Hamap MF_01537 Pyrimidine/purine nucleoside phosphorylase [ppnP]. 2 94 24.157 T 12-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 M892_17905 dbad9ed9fe57530fabdbe79a18ebef2c 94 Pfam PF06865 Protein of unknown function (DUF1255) 4 93 9.5E-32 T 12-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 M892_17905 dbad9ed9fe57530fabdbe79a18ebef2c 94 SUPERFAMILY SSF51182 3 94 6.76E-32 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily M892_04135 71f4323ad5b72536d43145961cdb02e9 350 Gene3D G3DSA:3.20.20.70 4 315 4.0E-131 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M892_04135 71f4323ad5b72536d43145961cdb02e9 350 PIRSF PIRSF001619 1 319 5.8E-137 T 12-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 M892_04135 71f4323ad5b72536d43145961cdb02e9 350 Hamap MF_01694 Biotin synthase [bioB]. 5 313 41.458 T 12-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 M892_04135 71f4323ad5b72536d43145961cdb02e9 350 TIGRFAM TIGR00433 bioB: biotin synthase 15 310 1.5E-123 T 12-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 M892_04135 71f4323ad5b72536d43145961cdb02e9 350 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 220 310 4.8E-20 T 12-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 M892_04135 71f4323ad5b72536d43145961cdb02e9 350 SMART SM00876 220 312 2.3E-45 T 12-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 M892_04135 71f4323ad5b72536d43145961cdb02e9 350 SMART SM00729 43 255 1.1E-40 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 M892_04135 71f4323ad5b72536d43145961cdb02e9 350 Pfam PF04055 Radical SAM superfamily 50 199 3.5E-14 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 M892_04135 71f4323ad5b72536d43145961cdb02e9 350 SUPERFAMILY SSF102114 5 310 1.44E-87 T 12-10-2018 M892_26685 fa64e4e91e5f37464d0ad40b58f18cde 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 1.8E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_26685 fa64e4e91e5f37464d0ad40b58f18cde 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 3.7E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_26685 fa64e4e91e5f37464d0ad40b58f18cde 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 3.7E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_26685 fa64e4e91e5f37464d0ad40b58f18cde 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 3.7E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_26685 fa64e4e91e5f37464d0ad40b58f18cde 289 Gene3D G3DSA:3.40.190.10 102 285 1.8E-43 T 12-10-2018 M892_26685 fa64e4e91e5f37464d0ad40b58f18cde 289 Pfam PF03466 LysR substrate binding domain 89 288 2.1E-27 T 12-10-2018 IPR005119 LysR, substrate-binding M892_26685 fa64e4e91e5f37464d0ad40b58f18cde 289 SUPERFAMILY SSF53850 91 288 3.44E-29 T 12-10-2018 M892_26685 fa64e4e91e5f37464d0ad40b58f18cde 289 Gene3D G3DSA:3.40.190.10 162 260 1.8E-43 T 12-10-2018 M892_26685 fa64e4e91e5f37464d0ad40b58f18cde 289 SUPERFAMILY SSF46785 3 85 6.53E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_26685 fa64e4e91e5f37464d0ad40b58f18cde 289 Gene3D G3DSA:1.10.10.10 6 90 1.3E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_20990 9a0e3624fe6d7c13d3a8acc670792126 669 SUPERFAMILY SSF52540 1 390 3.41E-27 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_20990 9a0e3624fe6d7c13d3a8acc670792126 669 Pfam PF13175 AAA ATPase domain 1 373 4.3E-28 T 12-10-2018 M892_17310 40053566ad4e0ecf188aed0b56f26baa 195 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 20 44 3.7E-4 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal M892_17310 40053566ad4e0ecf188aed0b56f26baa 195 Pfam PF05951 Bacterial protein of unknown function (DUF882) 48 195 1.2E-67 T 12-10-2018 IPR010275 Protein of unknown function DUF882 M892_17310 40053566ad4e0ecf188aed0b56f26baa 195 SUPERFAMILY SSF55166 79 195 1.23E-32 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 M892_17310 40053566ad4e0ecf188aed0b56f26baa 195 Gene3D G3DSA:3.30.1380.10 80 195 2.3E-11 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 M892_09535 b415fd7b78370cbd1302bd1ca8b91d3d 351 Gene3D G3DSA:3.40.50.2000 159 346 2.3E-34 T 12-10-2018 M892_09535 b415fd7b78370cbd1302bd1ca8b91d3d 351 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 73 303 1.5E-51 T 12-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 M892_09535 b415fd7b78370cbd1302bd1ca8b91d3d 351 Gene3D G3DSA:3.40.50.2000 4 154 3.9E-24 T 12-10-2018 M892_09535 b415fd7b78370cbd1302bd1ca8b91d3d 351 SUPERFAMILY SSF53756 9 344 4.87E-78 T 12-10-2018 M892_15750 baf640f2ab64f256c6ed018fcfa5b68c 632 ProSitePatterns PS01303 BCCT family of transporters signature. 321 330 - T 12-10-2018 IPR018093 BCCT transporter, conserved site M892_15750 baf640f2ab64f256c6ed018fcfa5b68c 632 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 13 502 2.3E-159 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 M892_15750 baf640f2ab64f256c6ed018fcfa5b68c 632 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 50 501 1.3E-147 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 M892_17235 17b2eab404d472e462ef5ca2f565e6e7 469 Hamap MF_01182 Cytochrome c-552 [nrfA]. 1 469 56.943 T 12-10-2018 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 M892_17235 17b2eab404d472e462ef5ca2f565e6e7 469 Gene3D G3DSA:1.20.140.10 303 445 2.1E-184 T 12-10-2018 M892_17235 17b2eab404d472e462ef5ca2f565e6e7 469 TIGRFAM TIGR03152 cyto_c552_HCOOH: formate-dependent cytochrome c nitrite reductase, c552 subunit 30 467 1.3E-246 T 12-10-2018 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 M892_17235 17b2eab404d472e462ef5ca2f565e6e7 469 Gene3D G3DSA:1.10.1130.10 34 463 2.1E-184 T 12-10-2018 M892_17235 17b2eab404d472e462ef5ca2f565e6e7 469 PIRSF PIRSF000243 21 468 2.0E-121 T 12-10-2018 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 M892_17235 17b2eab404d472e462ef5ca2f565e6e7 469 Pfam PF02335 Cytochrome c552 35 464 2.5E-176 T 12-10-2018 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 M892_17235 17b2eab404d472e462ef5ca2f565e6e7 469 SUPERFAMILY SSF48695 31 464 1.82E-159 T 12-10-2018 IPR036280 Multiheme cytochrome superfamily M892_25800 5b2555cd61c165f8c460b3e257c5bb65 399 SUPERFAMILY SSF50182 212 279 7.52E-18 T 12-10-2018 IPR010920 LSM domain superfamily M892_25800 5b2555cd61c165f8c460b3e257c5bb65 399 Gene3D G3DSA:2.30.30.60 228 280 3.5E-10 T 12-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily M892_25800 5b2555cd61c165f8c460b3e257c5bb65 399 SUPERFAMILY SSF82861 129 211 4.58E-14 T 12-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 M892_25800 5b2555cd61c165f8c460b3e257c5bb65 399 Pfam PF00924 Mechanosensitive ion channel 170 373 1.3E-56 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 M892_25800 5b2555cd61c165f8c460b3e257c5bb65 399 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 244 278 - T 12-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 M892_25800 5b2555cd61c165f8c460b3e257c5bb65 399 Gene3D G3DSA:3.30.70.100 281 378 3.5E-14 T 12-10-2018 M892_25800 5b2555cd61c165f8c460b3e257c5bb65 399 SUPERFAMILY SSF82689 284 383 3.27E-18 T 12-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 M892_27225 0e8a163a0fabd679308ab441893cf48a 139 SUPERFAMILY SSF54593 2 127 3.49E-24 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M892_27225 0e8a163a0fabd679308ab441893cf48a 139 Gene3D G3DSA:3.10.180.10 5 129 1.5E-19 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M892_27225 0e8a163a0fabd679308ab441893cf48a 139 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 105 1.8E-10 T 12-10-2018 M892_04660 05382453f7b01a4d4d6e26e315d225b1 142 Pfam PF05932 Tir chaperone protein (CesT) family 4 122 7.7E-20 T 12-10-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 M892_04660 05382453f7b01a4d4d6e26e315d225b1 142 SUPERFAMILY SSF69635 3 128 6.28E-51 T 12-10-2018 M892_04660 05382453f7b01a4d4d6e26e315d225b1 142 TIGRFAM TIGR02513 type_III_yscB: type III secretion system chaperone, YscB family 3 142 1.7E-45 T 12-10-2018 IPR013353 Type III secretion system chaperone YscB M892_04660 05382453f7b01a4d4d6e26e315d225b1 142 Gene3D G3DSA:3.30.1460.10 2 128 2.9E-28 T 12-10-2018 M892_28740 64d6fbc3d61cadef2804c30b2f45ad35 44 Pfam PF13817 IS66 C-terminal element 4 40 5.8E-10 T 12-10-2018 IPR039552 Transposase IS66, C-terminal M892_25845 64d6fbc3d61cadef2804c30b2f45ad35 44 Pfam PF13817 IS66 C-terminal element 4 40 5.8E-10 T 12-10-2018 IPR039552 Transposase IS66, C-terminal M892_26620 97c49667436709ce7b8ecf95a3d0ad23 100 SUPERFAMILY SSF101498 19 96 9.42E-8 T 12-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily M892_26620 97c49667436709ce7b8ecf95a3d0ad23 100 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 8 97 3.4E-15 T 12-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 M892_26620 97c49667436709ce7b8ecf95a3d0ad23 100 Pfam PF04316 Anti-sigma-28 factor, FlgM 50 91 6.9E-6 T 12-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal M892_08165 25fa3a312e7fede61674dd23d055195f 494 TIGRFAM TIGR00835 agcS: amino acid carrier protein 29 458 7.3E-162 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 M892_08165 25fa3a312e7fede61674dd23d055195f 494 PRINTS PR00175 Sodium/alanine symporter signature 222 241 1.6E-56 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 M892_08165 25fa3a312e7fede61674dd23d055195f 494 PRINTS PR00175 Sodium/alanine symporter signature 319 337 1.6E-56 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 M892_08165 25fa3a312e7fede61674dd23d055195f 494 PRINTS PR00175 Sodium/alanine symporter signature 103 125 1.6E-56 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 M892_08165 25fa3a312e7fede61674dd23d055195f 494 PRINTS PR00175 Sodium/alanine symporter signature 194 212 1.6E-56 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 M892_08165 25fa3a312e7fede61674dd23d055195f 494 PRINTS PR00175 Sodium/alanine symporter signature 366 388 1.6E-56 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 M892_08165 25fa3a312e7fede61674dd23d055195f 494 PRINTS PR00175 Sodium/alanine symporter signature 427 447 1.6E-56 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 M892_08165 25fa3a312e7fede61674dd23d055195f 494 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 103 118 - T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 M892_08165 25fa3a312e7fede61674dd23d055195f 494 Pfam PF01235 Sodium:alanine symporter family 64 469 3.0E-162 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 M892_18795 d4a52519971e51ccf4cd6eed0a9ec6b4 289 SUPERFAMILY SSF53807 26 273 1.13E-19 T 12-10-2018 M892_18795 d4a52519971e51ccf4cd6eed0a9ec6b4 289 Gene3D G3DSA:3.40.50.1980 71 187 8.7E-7 T 12-10-2018 M892_04345 fb562f52001e54e604f6961fe000ee8c 320 Gene3D G3DSA:1.10.3470.10 2 320 6.2E-76 T 12-10-2018 IPR037294 ABC transporter, BtuC-like M892_04345 fb562f52001e54e604f6961fe000ee8c 320 Pfam PF01032 FecCD transport family 13 318 3.1E-71 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 M892_04345 fb562f52001e54e604f6961fe000ee8c 320 SUPERFAMILY SSF81345 5 318 2.62E-63 T 12-10-2018 IPR037294 ABC transporter, BtuC-like M892_26530 0b73e9f410a4329f1a45f7cae2ce56d9 393 TIGRFAM TIGR01747 diampropi_NH3ly: diaminopropionate ammonia-lyase family 31 392 3.0E-91 T 12-10-2018 IPR010081 Diaminopropionate ammonia-lyase GO:0008838|GO:0030170 M892_26530 0b73e9f410a4329f1a45f7cae2ce56d9 393 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 46 364 2.4E-61 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme M892_26530 0b73e9f410a4329f1a45f7cae2ce56d9 393 Gene3D G3DSA:3.40.50.1100 42 392 8.8E-129 T 12-10-2018 M892_26530 0b73e9f410a4329f1a45f7cae2ce56d9 393 Gene3D G3DSA:3.40.50.1100 82 205 8.8E-129 T 12-10-2018 M892_26530 0b73e9f410a4329f1a45f7cae2ce56d9 393 SUPERFAMILY SSF53686 44 358 1.31E-61 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme M892_01240 02c38e0e8a5959642f044573e68f2ac5 383 Pfam PF12698 ABC-2 family transporter protein 20 367 5.0E-39 T 12-10-2018 M892_06555 408fbb6672ec51e3c336c9b96a7de815 363 Hamap MF_00416 Flagellar P-ring protein [flgI]. 2 363 39.865 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 M892_06555 408fbb6672ec51e3c336c9b96a7de815 363 PRINTS PR01010 Flagellar P-ring protein signature 54 69 4.0E-86 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 M892_06555 408fbb6672ec51e3c336c9b96a7de815 363 PRINTS PR01010 Flagellar P-ring protein signature 102 119 4.0E-86 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 M892_06555 408fbb6672ec51e3c336c9b96a7de815 363 PRINTS PR01010 Flagellar P-ring protein signature 22 37 4.0E-86 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 M892_06555 408fbb6672ec51e3c336c9b96a7de815 363 PRINTS PR01010 Flagellar P-ring protein signature 160 178 4.0E-86 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 M892_06555 408fbb6672ec51e3c336c9b96a7de815 363 PRINTS PR01010 Flagellar P-ring protein signature 80 99 4.0E-86 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 M892_06555 408fbb6672ec51e3c336c9b96a7de815 363 PRINTS PR01010 Flagellar P-ring protein signature 119 137 4.0E-86 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 M892_06555 408fbb6672ec51e3c336c9b96a7de815 363 PRINTS PR01010 Flagellar P-ring protein signature 37 52 4.0E-86 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 M892_06555 408fbb6672ec51e3c336c9b96a7de815 363 PRINTS PR01010 Flagellar P-ring protein signature 186 204 4.0E-86 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 M892_06555 408fbb6672ec51e3c336c9b96a7de815 363 PRINTS PR01010 Flagellar P-ring protein signature 250 262 4.0E-86 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 M892_06555 408fbb6672ec51e3c336c9b96a7de815 363 Pfam PF02119 Flagellar P-ring protein 22 362 6.8E-139 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 M892_05190 d441b36f6ef6fca997c39c38dc2b06e2 445 Gene3D G3DSA:1.10.10.10 29 123 4.2E-45 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_05190 d441b36f6ef6fca997c39c38dc2b06e2 445 Gene3D G3DSA:1.10.225.40 358 445 8.8E-38 T 12-10-2018 IPR038198 MukF, C-terminal domain superfamily M892_05190 d441b36f6ef6fca997c39c38dc2b06e2 445 Hamap MF_01803 Chromosome partition protein MukF [mukF]. 6 445 54.607 T 12-10-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 M892_05190 d441b36f6ef6fca997c39c38dc2b06e2 445 Pfam PF17193 MukF C-terminal domain 288 445 7.3E-78 T 12-10-2018 IPR033441 Chromosome partition protein MukF, C-terminal domain M892_05190 d441b36f6ef6fca997c39c38dc2b06e2 445 Gene3D G3DSA:1.20.58.590 124 316 1.8E-80 T 12-10-2018 IPR036141 MukF, middle domain superfamily M892_05190 d441b36f6ef6fca997c39c38dc2b06e2 445 SUPERFAMILY SSF140570 124 286 6.93E-76 T 12-10-2018 IPR036141 MukF, middle domain superfamily M892_05190 d441b36f6ef6fca997c39c38dc2b06e2 445 SUPERFAMILY SSF46785 13 123 2.99E-44 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_05190 d441b36f6ef6fca997c39c38dc2b06e2 445 Pfam PF03882 MukF winged-helix domain 10 122 3.0E-53 T 12-10-2018 IPR033439 Chromosome partition protein MukF, winged-helix domain M892_05190 d441b36f6ef6fca997c39c38dc2b06e2 445 PIRSF PIRSF018282 1 445 4.7E-248 T 12-10-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 M892_05190 d441b36f6ef6fca997c39c38dc2b06e2 445 Pfam PF17192 MukF middle domain 126 286 2.2E-78 T 12-10-2018 IPR033440 Chromosome partition protein MukF, middle domain M892_20075 519a60617d12041d868c0f47faf63d5a 535 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 74 521 4.9E-136 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 M892_20075 519a60617d12041d868c0f47faf63d5a 535 ProSitePatterns PS01303 BCCT family of transporters signature. 336 345 - T 12-10-2018 IPR018093 BCCT transporter, conserved site M892_20075 519a60617d12041d868c0f47faf63d5a 535 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 33 520 1.6E-169 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 M892_12485 40d5a5972f5dda2d766315ed31b3000e 172 SUPERFAMILY SSF52540 4 169 2.5E-32 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_12485 40d5a5972f5dda2d766315ed31b3000e 172 Pfam PF01202 Shikimate kinase 13 169 1.6E-57 T 12-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 M892_12485 40d5a5972f5dda2d766315ed31b3000e 172 Gene3D G3DSA:3.40.50.300 1 172 1.9E-57 T 12-10-2018 M892_12485 40d5a5972f5dda2d766315ed31b3000e 172 PRINTS PR01100 Shikimate kinase family signature 7 22 3.3E-29 T 12-10-2018 M892_12485 40d5a5972f5dda2d766315ed31b3000e 172 PRINTS PR01100 Shikimate kinase family signature 98 115 3.3E-29 T 12-10-2018 M892_12485 40d5a5972f5dda2d766315ed31b3000e 172 PRINTS PR01100 Shikimate kinase family signature 77 86 3.3E-29 T 12-10-2018 M892_12485 40d5a5972f5dda2d766315ed31b3000e 172 PRINTS PR01100 Shikimate kinase family signature 31 44 3.3E-29 T 12-10-2018 M892_12485 40d5a5972f5dda2d766315ed31b3000e 172 PRINTS PR01100 Shikimate kinase family signature 59 67 3.3E-29 T 12-10-2018 M892_12485 40d5a5972f5dda2d766315ed31b3000e 172 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 12-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 M892_12485 40d5a5972f5dda2d766315ed31b3000e 172 Hamap MF_00109 Shikimate kinase [aroK]. 4 170 29.822 T 12-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 M892_21570 f3b4d5f7945641cb28bf025b5d89b363 172 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 2 166 1.9E-29 T 12-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 M892_21570 f3b4d5f7945641cb28bf025b5d89b363 172 SUPERFAMILY SSF51283 1 169 6.28E-35 T 12-10-2018 IPR036157 dUTPase-like superfamily M892_21570 f3b4d5f7945641cb28bf025b5d89b363 172 Gene3D G3DSA:2.70.40.10 1 172 2.0E-39 T 12-10-2018 IPR036157 dUTPase-like superfamily M892_21245 efe6a963113495f16c2462ef98dca7f9 501 SUPERFAMILY SSF52540 269 480 3.26E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_21245 efe6a963113495f16c2462ef98dca7f9 501 SMART SM00382 278 472 1.6E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_21245 efe6a963113495f16c2462ef98dca7f9 501 SMART SM00382 30 219 1.0E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_21245 efe6a963113495f16c2462ef98dca7f9 501 ProSitePatterns PS00211 ABC transporters family signature. 396 410 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_21245 efe6a963113495f16c2462ef98dca7f9 501 SUPERFAMILY SSF52540 5 229 2.22E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_21245 efe6a963113495f16c2462ef98dca7f9 501 Gene3D G3DSA:3.40.50.300 1 240 2.1E-57 T 12-10-2018 M892_21245 efe6a963113495f16c2462ef98dca7f9 501 Pfam PF00005 ABC transporter 270 423 9.9E-25 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_21245 efe6a963113495f16c2462ef98dca7f9 501 Pfam PF00005 ABC transporter 21 170 6.4E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_21245 efe6a963113495f16c2462ef98dca7f9 501 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_21245 efe6a963113495f16c2462ef98dca7f9 501 Gene3D G3DSA:3.40.50.300 266 495 1.5E-46 T 12-10-2018 M892_20875 d1423ba69b86b807f67ff7aad21ac524 321 Gene3D G3DSA:1.50.10.150 6 309 1.7E-32 T 12-10-2018 IPR038665 Voltage-dependent anion channel superfamily M892_20875 d1423ba69b86b807f67ff7aad21ac524 321 Pfam PF03595 Voltage-dependent anion channel 12 304 5.5E-27 T 12-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 M892_08145 baef0f1da88df0f0695bc0e5a978d44b 407 Gene3D G3DSA:3.40.50.300 217 407 5.6E-52 T 12-10-2018 M892_08145 baef0f1da88df0f0695bc0e5a978d44b 407 SMART SM00490 260 341 1.8E-31 T 12-10-2018 IPR001650 Helicase, C-terminal M892_08145 baef0f1da88df0f0695bc0e5a978d44b 407 SUPERFAMILY SSF52540 76 358 1.26E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_08145 baef0f1da88df0f0695bc0e5a978d44b 407 SMART SM00487 22 222 2.7E-55 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain M892_08145 baef0f1da88df0f0695bc0e5a978d44b 407 Gene3D G3DSA:3.40.50.300 1 211 7.3E-70 T 12-10-2018 M892_08145 baef0f1da88df0f0695bc0e5a978d44b 407 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site M892_08145 baef0f1da88df0f0695bc0e5a978d44b 407 Hamap MF_00967 ATP-dependent RNA helicase SrmB [srmB]. 3 407 49.8 T 12-10-2018 IPR028621 ATP-dependent RNA helicase SrmB GO:0000027|GO:0004004 M892_08145 baef0f1da88df0f0695bc0e5a978d44b 407 Pfam PF00271 Helicase conserved C-terminal domain 235 341 1.7E-31 T 12-10-2018 IPR001650 Helicase, C-terminal M892_08145 baef0f1da88df0f0695bc0e5a978d44b 407 Pfam PF00270 DEAD/DEAH box helicase 27 195 7.7E-45 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 M892_25220 1e81f19d7d9c938be38928e84139f487 524 Gene3D G3DSA:1.20.58.370 16 105 1.7E-32 T 12-10-2018 IPR035277 MalF, N-terminal M892_25220 1e81f19d7d9c938be38928e84139f487 524 Gene3D G3DSA:1.10.3720.10 280 522 1.7E-69 T 12-10-2018 IPR035906 MetI-like superfamily M892_25220 1e81f19d7d9c938be38928e84139f487 524 Pfam PF14785 Maltose transport system permease protein MalF P2 domain 110 270 3.0E-58 T 12-10-2018 IPR029345 Maltose transport system permease protein MalF, P2 domain M892_25220 1e81f19d7d9c938be38928e84139f487 524 SUPERFAMILY SSF161098 272 513 1.15E-58 T 12-10-2018 IPR035906 MetI-like superfamily M892_25220 1e81f19d7d9c938be38928e84139f487 524 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 307 512 8.5E-17 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M892_25220 1e81f19d7d9c938be38928e84139f487 524 SUPERFAMILY SSF160964 24 270 2.09E-81 T 12-10-2018 M892_25220 1e81f19d7d9c938be38928e84139f487 524 Gene3D G3DSA:2.40.430.10 128 214 3.8E-51 T 12-10-2018 M892_25220 1e81f19d7d9c938be38928e84139f487 524 Gene3D G3DSA:3.10.650.10 108 278 3.8E-51 T 12-10-2018 M892_15730 6629b0f87dbc374095b8b969f7f11c9b 131 SUPERFAMILY SSF54593 2 126 8.8E-29 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M892_15730 6629b0f87dbc374095b8b969f7f11c9b 131 Gene3D G3DSA:3.10.180.10 1 128 2.4E-34 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M892_15730 6629b0f87dbc374095b8b969f7f11c9b 131 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 123 1.3E-17 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain M892_14505 c01a8c3e6c640cc9b9393328787a4355 406 Pfam PF05940 NnrS protein 28 400 7.5E-105 T 12-10-2018 IPR010266 NnrS M892_00565 6f5e679cb3718f35168a4533183367df 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 13 28 4.2E-9 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M892_00565 6f5e679cb3718f35168a4533183367df 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 48 63 4.2E-9 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M892_00565 6f5e679cb3718f35168a4533183367df 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 63 78 4.2E-9 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M892_00565 6f5e679cb3718f35168a4533183367df 98 Gene3D G3DSA:1.10.10.10 1 93 7.6E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_00565 6f5e679cb3718f35168a4533183367df 98 SUPERFAMILY SSF46785 7 95 1.12E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_00565 6f5e679cb3718f35168a4533183367df 98 SMART SM00418 11 92 6.1E-9 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M892_00565 6f5e679cb3718f35168a4533183367df 98 Pfam PF12840 Helix-turn-helix domain 11 72 5.2E-8 T 12-10-2018 M892_26265 de2e4cccf50fb867462b55de9bdff36a 249 Hamap MF_01561 Probable phosphatase YcdX [ycdX]. 3 244 46.071 T 12-10-2018 IPR023710 Probable phosphatase YcdX GO:0008270 M892_26265 de2e4cccf50fb867462b55de9bdff36a 249 Gene3D G3DSA:3.20.20.140 4 246 6.5E-57 T 12-10-2018 M892_26265 de2e4cccf50fb867462b55de9bdff36a 249 SMART SM00481 6 78 6.2E-7 T 12-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal M892_26265 de2e4cccf50fb867462b55de9bdff36a 249 SUPERFAMILY SSF89550 5 243 3.01E-55 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 M892_08520 d678951546446bddad58bd7693fb11cd 268 Gene3D G3DSA:3.60.21.10 2 265 1.6E-71 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like M892_08520 d678951546446bddad58bd7693fb11cd 268 Pfam PF00149 Calcineurin-like phosphoesterase 9 200 8.0E-16 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 M892_08520 d678951546446bddad58bd7693fb11cd 268 SUPERFAMILY SSF56300 6 253 1.2E-58 T 12-10-2018 M892_08520 d678951546446bddad58bd7693fb11cd 268 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 8 254 42.055 T 12-10-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 M892_08520 d678951546446bddad58bd7693fb11cd 268 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 199 254 7.0E-23 T 12-10-2018 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 M892_05210 8afa9619289ca5970359e577e821a6dc 237 SMART SM00862 158 234 3.4E-19 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M892_05210 8afa9619289ca5970359e577e821a6dc 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 234 2.1E-20 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M892_05210 8afa9619289ca5970359e577e821a6dc 237 SUPERFAMILY SSF46894 134 235 1.45E-26 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M892_05210 8afa9619289ca5970359e577e821a6dc 237 Gene3D G3DSA:3.40.50.2300 1 136 9.8E-34 T 12-10-2018 M892_05210 8afa9619289ca5970359e577e821a6dc 237 SMART SM00448 3 113 8.6E-37 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_05210 8afa9619289ca5970359e577e821a6dc 237 Pfam PF00072 Response regulator receiver domain 5 113 2.5E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_05210 8afa9619289ca5970359e577e821a6dc 237 Gene3D G3DSA:1.10.10.10 137 237 4.5E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_05210 8afa9619289ca5970359e577e821a6dc 237 SUPERFAMILY SSF52172 2 124 1.38E-36 T 12-10-2018 IPR011006 CheY-like superfamily M892_05090 b128ebeb2f1a50de17daf0a9cf3bc432 232 Pfam PF01618 MotA/TolQ/ExbB proton channel family 80 207 1.3E-42 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel M892_05090 b128ebeb2f1a50de17daf0a9cf3bc432 232 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 5 225 43.808 T 12-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 M892_05090 b128ebeb2f1a50de17daf0a9cf3bc432 232 TIGRFAM TIGR02796 tolQ: protein TolQ 6 220 2.7E-92 T 12-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 M892_22960 9c168ac0d5cfc1655774b94ec5c2fd15 293 Pfam PF11060 Protein of unknown function (DUF2861) 22 288 1.0E-91 T 12-10-2018 IPR021290 Protein of unknown function DUF2861 M892_08485 dd55542cd063231d49d9cbbdd7a1f752 367 Gene3D G3DSA:3.40.50.300 16 195 1.1E-22 T 12-10-2018 M892_08485 dd55542cd063231d49d9cbbdd7a1f752 367 Hamap MF_01919 Cell division protein ZapE [zapE]. 1 367 53.208 T 12-10-2018 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 M892_08485 dd55542cd063231d49d9cbbdd7a1f752 367 Pfam PF03969 AFG1-like ATPase 1 364 6.2E-155 T 12-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 M892_08485 dd55542cd063231d49d9cbbdd7a1f752 367 SUPERFAMILY SSF52540 61 193 5.03E-15 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_10150 d969c1f6d7954903acccc8c3f23d4844 141 SUPERFAMILY SSF52402 3 139 2.01E-33 T 12-10-2018 M892_10150 d969c1f6d7954903acccc8c3f23d4844 141 Pfam PF00582 Universal stress protein family 3 138 8.7E-22 T 12-10-2018 IPR006016 UspA M892_10150 d969c1f6d7954903acccc8c3f23d4844 141 Gene3D G3DSA:3.40.50.620 2 141 4.1E-49 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M892_10150 d969c1f6d7954903acccc8c3f23d4844 141 PIRSF PIRSF006276 1 141 8.4E-54 T 12-10-2018 IPR006015 Universal stress protein A M892_04455 aba8ac65ad7a4298934923469fc8ec19 334 Pfam PF05844 YopD protein 62 331 4.7E-37 T 12-10-2018 IPR008898 YopD-like M892_01840 79c5c0d0a9c3cc92eaa6f3ec45d5a22e 395 SMART SM00897 27 224 1.8E-37 T 12-10-2018 IPR013702 FIST domain, N-terminal M892_01840 79c5c0d0a9c3cc92eaa6f3ec45d5a22e 395 SMART SM01204 225 372 1.1E-32 T 12-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 M892_01840 79c5c0d0a9c3cc92eaa6f3ec45d5a22e 395 Pfam PF10442 FIST C domain 225 371 3.9E-20 T 12-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 M892_01840 79c5c0d0a9c3cc92eaa6f3ec45d5a22e 395 Pfam PF08495 FIST N domain 32 223 1.7E-23 T 12-10-2018 IPR013702 FIST domain, N-terminal M892_24130 4463b0ebf6b5a9d8d6e102128c6aacee 203 SUPERFAMILY SSF46626 18 194 3.29E-25 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M892_24130 4463b0ebf6b5a9d8d6e102128c6aacee 203 Gene3D G3DSA:1.10.760.10 40 200 1.5E-62 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M892_24130 4463b0ebf6b5a9d8d6e102128c6aacee 203 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 7 183 1.2E-61 T 12-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO M892_05905 1c7a5bf0a9b5001213744c75dddab423 435 SUPERFAMILY SSF56322 28 425 2.75E-98 T 12-10-2018 IPR005801 ADC synthase GO:0009058 M892_05905 1c7a5bf0a9b5001213744c75dddab423 435 Gene3D G3DSA:3.60.120.10 1 429 5.5E-126 T 12-10-2018 IPR005801 ADC synthase GO:0009058 M892_05905 1c7a5bf0a9b5001213744c75dddab423 435 Pfam PF00425 chorismate binding enzyme 164 417 1.2E-70 T 12-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal M892_05905 1c7a5bf0a9b5001213744c75dddab423 435 Hamap MF_01935 Isochorismate synthase MenF [menF]. 3 427 30.858 T 12-10-2018 IPR034681 Isochorismate synthase MenF GO:0008909|GO:0009234 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 M892_05905 1c7a5bf0a9b5001213744c75dddab423 435 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 85 424 2.4E-101 T 12-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 M892_18390 b2d47334ceb275d862279d4773adfbac 250 SUPERFAMILY SSF52540 9 218 1.1E-50 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_18390 b2d47334ceb275d862279d4773adfbac 250 Pfam PF00005 ABC transporter 26 165 1.3E-26 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_18390 b2d47334ceb275d862279d4773adfbac 250 Gene3D G3DSA:3.40.50.300 9 226 2.2E-56 T 12-10-2018 M892_18390 b2d47334ceb275d862279d4773adfbac 250 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_18390 b2d47334ceb275d862279d4773adfbac 250 SMART SM00382 34 212 2.3E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_21220 63c9c0fbade466fc1cc79e658b7bca25 212 Pfam PF13645 L,D-transpeptidase catalytic domain 49 210 2.1E-65 T 12-10-2018 IPR032676 Putative L,D-transpeptidase tautomerase M892_28670 70b20b74f6cf23670ef77a16c26087be 181 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 29 3.9E-7 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M892_28670 70b20b74f6cf23670ef77a16c26087be 181 Pfam PF07963 Prokaryotic N-terminal methylation motif 6 28 1.6E-5 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M892_28670 70b20b74f6cf23670ef77a16c26087be 181 PIRSF PIRSF024622 2 181 1.8E-34 T 12-10-2018 IPR016824 Tfp pilus assembly protein FimT M892_28670 70b20b74f6cf23670ef77a16c26087be 181 Gene3D G3DSA:3.30.700.10 9 127 1.3E-9 T 12-10-2018 M892_28670 70b20b74f6cf23670ef77a16c26087be 181 SUPERFAMILY SSF54523 9 110 5.02E-13 T 12-10-2018 M892_14405 0629a2347bf85fe911b52a9d2e7eb256 149 Gene3D G3DSA:2.60.120.370 1 142 2.1E-14 T 12-10-2018 IPR037012 YhcH/YjgK/YiaL superfamily M892_14405 0629a2347bf85fe911b52a9d2e7eb256 149 Pfam PF04074 Domain of unknown function (DUF386) 3 139 4.9E-25 T 12-10-2018 IPR004375 YhcH/YjgK/YiaL family M892_14405 0629a2347bf85fe911b52a9d2e7eb256 149 SUPERFAMILY SSF51197 1 142 3.02E-25 T 12-10-2018 M892_11940 666505e1e119d876faebb8fd493e5142 125 Hamap MF_00709 Fumarate reductase subunit D [frdD]. 7 125 24.592 T 12-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 M892_11940 666505e1e119d876faebb8fd493e5142 125 SUPERFAMILY SSF81343 7 125 5.23E-50 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 M892_11940 666505e1e119d876faebb8fd493e5142 125 Pfam PF02313 Fumarate reductase subunit D 11 123 2.5E-44 T 12-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 M892_11940 666505e1e119d876faebb8fd493e5142 125 PIRSF PIRSF000179 6 125 7.5E-56 T 12-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 M892_11940 666505e1e119d876faebb8fd493e5142 125 ProDom PD015693 FUMARATE MEMBRANE REDUCTASE D SUBUNIT INNER TRANSMEMBRANE HYDROPHOBIC REDUCTASE POLYPEPTIDE 11 125 4.0E-48 T 12-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 M892_11940 666505e1e119d876faebb8fd493e5142 125 Gene3D G3DSA:1.20.1300.10 6 125 3.4E-44 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 M892_03120 36736966571af67f1c8c31e8b5753fb8 448 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 276 434 1.0E-41 T 12-10-2018 IPR000160 GGDEF domain M892_03120 36736966571af67f1c8c31e8b5753fb8 448 SUPERFAMILY SSF49785 36 215 8.42E-12 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily M892_03120 36736966571af67f1c8c31e8b5753fb8 448 SMART SM00267 267 434 9.6E-49 T 12-10-2018 IPR000160 GGDEF domain M892_03120 36736966571af67f1c8c31e8b5753fb8 448 SUPERFAMILY SSF55073 283 432 4.24E-40 T 12-10-2018 IPR029787 Nucleotide cyclase M892_03120 36736966571af67f1c8c31e8b5753fb8 448 Pfam PF00990 Diguanylate cyclase, GGDEF domain 278 430 1.7E-37 T 12-10-2018 IPR000160 GGDEF domain M892_03120 36736966571af67f1c8c31e8b5753fb8 448 Pfam PF08547 Complex I intermediate-associated protein 30 (CIA30) 36 112 8.4E-4 T 12-10-2018 IPR013857 NADH:ubiquinone oxidoreductase intermediate-associated protein 30 Reactome: R-HSA-6799198 M892_03120 36736966571af67f1c8c31e8b5753fb8 448 Gene3D G3DSA:3.30.70.270 264 434 3.0E-47 T 12-10-2018 M892_26725 11ab1f00fc0b05c906fb0ea41d3ff478 301 TIGRFAM TIGR03340 phn_DUF6: phosphonate utilization associated putative membrane protein 4 297 3.1E-104 T 12-10-2018 IPR017725 Phosphonate utilization associated transmembrane protein, putative M892_26725 11ab1f00fc0b05c906fb0ea41d3ff478 301 Pfam PF00892 EamA-like transporter family 152 299 5.0E-7 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M892_26725 11ab1f00fc0b05c906fb0ea41d3ff478 301 SUPERFAMILY SSF103481 200 299 2.75E-7 T 12-10-2018 M892_26725 11ab1f00fc0b05c906fb0ea41d3ff478 301 SUPERFAMILY SSF103481 46 140 7.45E-9 T 12-10-2018 M892_06265 932e86da49c7214b67e3f8fd80a3c896 114 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 112 9.1E-35 T 12-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 M892_06265 932e86da49c7214b67e3f8fd80a3c896 114 PIRSF PIRSF000169 1 114 9.6E-38 T 12-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 M892_06265 932e86da49c7214b67e3f8fd80a3c896 114 SUPERFAMILY SSF81343 4 113 1.06E-25 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 M892_06265 932e86da49c7214b67e3f8fd80a3c896 114 Gene3D G3DSA:1.20.1300.10 1 114 7.9E-28 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 M892_06265 932e86da49c7214b67e3f8fd80a3c896 114 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 10 101 4.4E-6 T 12-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 M892_01615 89aaaf92cda1ffc849cc43918f827c31 163 Gene3D G3DSA:3.10.129.10 5 155 9.8E-27 T 12-10-2018 M892_01615 89aaaf92cda1ffc849cc43918f827c31 163 SUPERFAMILY SSF54637 12 157 7.84E-18 T 12-10-2018 IPR029069 HotDog domain superfamily M892_01615 89aaaf92cda1ffc849cc43918f827c31 163 Pfam PF14539 Domain of unknown function (DUF4442) 18 110 4.6E-11 T 12-10-2018 IPR027961 Protein of unknown function DUF4442 M892_24270 06eba3f4a9182070d7cf27b73bffc3f5 114 Gene3D G3DSA:3.20.160.10 1 114 1.2E-52 T 12-10-2018 IPR038604 Type III effector HopJ superfamily M892_24270 06eba3f4a9182070d7cf27b73bffc3f5 114 Pfam PF08888 HopJ type III effector protein 3 111 8.3E-50 T 12-10-2018 IPR014984 HopJ type III effector protein M892_09260 b5bc17a6d4066ad8eeb1a220ee0f95e5 305 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 4 298 20.716 T 12-10-2018 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 M892_09260 b5bc17a6d4066ad8eeb1a220ee0f95e5 305 Pfam PF01040 UbiA prenyltransferase family 21 267 1.4E-38 T 12-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 M892_09260 b5bc17a6d4066ad8eeb1a220ee0f95e5 305 PIRSF PIRSF005355 1 303 4.1E-84 T 12-10-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 M892_09260 b5bc17a6d4066ad8eeb1a220ee0f95e5 305 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 13 295 4.6E-97 T 12-10-2018 M892_17040 1f0a11ac9183ef325dedbcd83bc9deb7 190 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 175 18.503 T 12-10-2018 IPR006008 Intracellular septation protein A GO:0016021 M892_17040 1f0a11ac9183ef325dedbcd83bc9deb7 190 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 177 1.0E-63 T 12-10-2018 IPR006008 Intracellular septation protein A GO:0016021 M892_17040 1f0a11ac9183ef325dedbcd83bc9deb7 190 Pfam PF04279 Intracellular septation protein A 1 174 1.0E-67 T 12-10-2018 IPR006008 Intracellular septation protein A GO:0016021 M892_25550 02a1daff1b5934d5ad7e6a6457c92a33 548 Pfam PF13584 Oxygen tolerance 17 460 6.9E-74 T 12-10-2018 IPR025738 Aerotolerance-related protein BatD M892_01920 d84020a1d0dc8ae9118eaceb2e820a2c 286 SUPERFAMILY SSF161098 10 275 6.15E-54 T 12-10-2018 IPR035906 MetI-like superfamily M892_01920 d84020a1d0dc8ae9118eaceb2e820a2c 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 283 5.8E-20 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M892_01920 d84020a1d0dc8ae9118eaceb2e820a2c 286 Gene3D G3DSA:1.10.3720.10 7 278 1.6E-53 T 12-10-2018 IPR035906 MetI-like superfamily M892_18800 2a916726bf554f4e9c2d645803d17863 330 Gene3D G3DSA:2.40.160.10 25 330 1.8E-40 T 12-10-2018 IPR023614 Porin domain superfamily M892_18800 2a916726bf554f4e9c2d645803d17863 330 SUPERFAMILY SSF56935 25 330 2.11E-41 T 12-10-2018 M892_18800 2a916726bf554f4e9c2d645803d17863 330 Pfam PF13609 Gram-negative porin 12 316 3.3E-20 T 12-10-2018 M892_14560 2d0d754a3f3799cba2796c8711688006 327 Pfam PF14057 GGGtGRT protein 7 324 2.8E-173 T 12-10-2018 IPR025964 GGGtGRT protein M892_03980 92e2e92b9e4bfa4c4326f394a207599e 220 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 216 109.361 T 12-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 M892_03980 92e2e92b9e4bfa4c4326f394a207599e 220 Gene3D G3DSA:3.60.21.10 2 213 6.2E-13 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like M892_03980 92e2e92b9e4bfa4c4326f394a207599e 220 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 1 207 6.1E-92 T 12-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 M892_03980 92e2e92b9e4bfa4c4326f394a207599e 220 SUPERFAMILY SSF56300 6 198 8.68E-25 T 12-10-2018 M892_24375 9b91e4ccdb3717534d0ab4bba754a171 248 Gene3D G3DSA:2.50.20.10 13 244 8.0E-57 T 12-10-2018 M892_24375 9b91e4ccdb3717534d0ab4bba754a171 248 Pfam PF17131 Outer membrane lipoprotein-sorting protein 64 244 1.7E-52 T 12-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein M892_02710 f6503dba719e982b88f56bf07d6ebee0 124 Pfam PF03788 LrgA family 25 115 1.7E-25 T 12-10-2018 IPR005538 LrgA/CidA family GO:0016021 M892_02710 f6503dba719e982b88f56bf07d6ebee0 124 Hamap MF_01144 UPF0299 membrane protein YohJ [yohJ]. 5 124 21.554 T 12-10-2018 IPR022957 Uncharacterised protein family UPF0299 M892_25080 96f83ff30b1b88b468a3e5441a1e259d 456 Gene3D G3DSA:3.80.30.20 36 364 1.0E-72 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe M892_25080 96f83ff30b1b88b468a3e5441a1e259d 456 SUPERFAMILY SSF102114 58 439 4.45E-82 T 12-10-2018 M892_25080 96f83ff30b1b88b468a3e5441a1e259d 456 Pfam PF04055 Radical SAM superfamily 67 238 1.5E-14 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 M892_25080 96f83ff30b1b88b468a3e5441a1e259d 456 SMART SM00729 62 285 1.7E-39 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 M892_25080 96f83ff30b1b88b468a3e5441a1e259d 456 TIGRFAM TIGR04107 rSAM_HutW: putative heme utilization radical SAM enzyme HutW 23 442 9.6E-180 T 12-10-2018 IPR026332 Putative heme utilization radical SAM enzyme HutW M892_16340 128e1726af531a2fd3eed0a9a2b92ec8 213 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 9 198 4.2E-41 T 12-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 M892_16340 128e1726af531a2fd3eed0a9a2b92ec8 213 TIGRFAM TIGR00235 udk: uridine kinase 3 211 2.4E-89 T 12-10-2018 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|Reactome: R-HSA-73614 M892_16340 128e1726af531a2fd3eed0a9a2b92ec8 213 Hamap MF_00551 Uridine kinase [udk]. 4 212 39.382 T 12-10-2018 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 M892_16340 128e1726af531a2fd3eed0a9a2b92ec8 213 Gene3D G3DSA:3.40.50.300 3 213 9.0E-61 T 12-10-2018 M892_16340 128e1726af531a2fd3eed0a9a2b92ec8 213 SUPERFAMILY SSF52540 6 204 1.19E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_16340 128e1726af531a2fd3eed0a9a2b92ec8 213 PRINTS PR00988 Uridine kinase signature 178 191 2.5E-36 T 12-10-2018 M892_16340 128e1726af531a2fd3eed0a9a2b92ec8 213 PRINTS PR00988 Uridine kinase signature 156 167 2.5E-36 T 12-10-2018 M892_16340 128e1726af531a2fd3eed0a9a2b92ec8 213 PRINTS PR00988 Uridine kinase signature 142 152 2.5E-36 T 12-10-2018 M892_16340 128e1726af531a2fd3eed0a9a2b92ec8 213 PRINTS PR00988 Uridine kinase signature 41 52 2.5E-36 T 12-10-2018 M892_16340 128e1726af531a2fd3eed0a9a2b92ec8 213 PRINTS PR00988 Uridine kinase signature 7 24 2.5E-36 T 12-10-2018 M892_16340 128e1726af531a2fd3eed0a9a2b92ec8 213 PRINTS PR00988 Uridine kinase signature 86 101 2.5E-36 T 12-10-2018 M892_19485 89b84af7a00aae5e56a5495cdbfe2640 436 SUPERFAMILY SSF51690 129 409 4.32E-88 T 12-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 M892_19485 89b84af7a00aae5e56a5495cdbfe2640 436 PIRSF PIRSF000484 1 396 5.1E-69 T 12-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 M892_19485 89b84af7a00aae5e56a5495cdbfe2640 436 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 10 412 7.8E-155 T 12-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 M892_19485 89b84af7a00aae5e56a5495cdbfe2640 436 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 7 413 43.629 T 12-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 M892_19485 89b84af7a00aae5e56a5495cdbfe2640 436 SUPERFAMILY SSF54675 8 148 1.59E-33 T 12-10-2018 M892_19485 89b84af7a00aae5e56a5495cdbfe2640 436 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 178 412 6.7E-81 T 12-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 M892_19485 89b84af7a00aae5e56a5495cdbfe2640 436 Gene3D G3DSA:3.20.140.10 1 427 2.6E-162 T 12-10-2018 M892_20405 d1615776bb9cd9854f01b6d8c51ad8b4 92 Gene3D G3DSA:3.30.1330.40 1 91 2.1E-22 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 M892_20405 d1615776bb9cd9854f01b6d8c51ad8b4 92 SUPERFAMILY SSF55298 4 89 1.37E-20 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 M892_20405 d1615776bb9cd9854f01b6d8c51ad8b4 92 Pfam PF01042 Endoribonuclease L-PSP 3 85 2.5E-14 T 12-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 M892_14645 c9056b8ec6e340142a746dcc5d34f2d8 269 Pfam PF00899 ThiF family 23 198 7.3E-38 T 12-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 M892_14645 c9056b8ec6e340142a746dcc5d34f2d8 269 SUPERFAMILY SSF69572 9 267 2.49E-64 T 12-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 M892_14645 c9056b8ec6e340142a746dcc5d34f2d8 269 Gene3D G3DSA:3.40.50.720 5 269 1.7E-109 T 12-10-2018 M892_27230 1bae7b8a39a114502219fc714ff7c4ee 485 Pfam PF02447 GntP family permease 5 446 2.6E-101 T 12-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 M892_00705 4037bf6e3340b406594f6a4aabb72636 171 PIRSF PIRSF028065 1 149 3.7E-70 T 12-10-2018 IPR016865 Inner membrane protein RclC M892_00705 4037bf6e3340b406594f6a4aabb72636 171 Pfam PF04224 Protein of unknown function, DUF417 2 145 3.2E-41 T 12-10-2018 IPR007339 Inner membrane protein RclC-like M892_08845 f0f6fe304dca9c4d0f66a99cbfefe1bd 159 Pfam PF00186 Dihydrofolate reductase 3 159 5.1E-62 T 12-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 M892_08845 f0f6fe304dca9c4d0f66a99cbfefe1bd 159 Gene3D G3DSA:3.40.430.10 1 159 7.9E-61 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 M892_08845 f0f6fe304dca9c4d0f66a99cbfefe1bd 159 PRINTS PR00070 Dihydrofolate reductase signature 28 36 2.9E-14 T 12-10-2018 M892_08845 f0f6fe304dca9c4d0f66a99cbfefe1bd 159 PRINTS PR00070 Dihydrofolate reductase signature 92 106 2.9E-14 T 12-10-2018 M892_08845 f0f6fe304dca9c4d0f66a99cbfefe1bd 159 PRINTS PR00070 Dihydrofolate reductase signature 14 24 2.9E-14 T 12-10-2018 M892_08845 f0f6fe304dca9c4d0f66a99cbfefe1bd 159 PRINTS PR00070 Dihydrofolate reductase signature 41 52 2.9E-14 T 12-10-2018 M892_08845 f0f6fe304dca9c4d0f66a99cbfefe1bd 159 PIRSF PIRSF000194 1 159 3.6E-63 T 12-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 M892_08845 f0f6fe304dca9c4d0f66a99cbfefe1bd 159 SUPERFAMILY SSF53597 1 159 7.15E-58 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 M892_00450 5fd148b1b49a11a2ea104dfef152b524 443 Hamap MF_01030 D-serine dehydratase [dsdA]. 1 443 272.478 T 12-10-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 M892_00450 5fd148b1b49a11a2ea104dfef152b524 443 TIGRFAM TIGR02035 D_Ser_am_lyase: D-serine ammonia-lyase 10 438 3.3E-225 T 12-10-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 M892_00450 5fd148b1b49a11a2ea104dfef152b524 443 Gene3D G3DSA:3.40.50.1100 116 238 9.6E-196 T 12-10-2018 M892_00450 5fd148b1b49a11a2ea104dfef152b524 443 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 108 122 - T 12-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 M892_00450 5fd148b1b49a11a2ea104dfef152b524 443 SUPERFAMILY SSF53686 96 431 1.12E-51 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme M892_00450 5fd148b1b49a11a2ea104dfef152b524 443 Gene3D G3DSA:3.40.50.1100 24 438 9.6E-196 T 12-10-2018 M892_00450 5fd148b1b49a11a2ea104dfef152b524 443 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 76 399 2.5E-58 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme M892_01540 3bc9ef567a72b66a4587fae4339b734a 425 Pfam PF02321 Outer membrane efflux protein 222 405 7.8E-25 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 M892_01540 3bc9ef567a72b66a4587fae4339b734a 425 Pfam PF02321 Outer membrane efflux protein 12 199 2.7E-29 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 M892_01540 3bc9ef567a72b66a4587fae4339b734a 425 SUPERFAMILY SSF56954 11 419 4.05E-87 T 12-10-2018 M892_01540 3bc9ef567a72b66a4587fae4339b734a 425 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 10 418 4.5E-118 T 12-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 M892_01540 3bc9ef567a72b66a4587fae4339b734a 425 Gene3D G3DSA:1.20.1600.10 10 418 7.8E-81 T 12-10-2018 M892_10750 4e8eba28712624f6fcf93b94b91ce300 268 Pfam PF07070 SpoOM protein 4 219 1.1E-76 T 12-10-2018 IPR009776 Sporulation stage 0, protein M M892_00525 c08d0e4d5b4444bc15b6195b5f56e244 337 SUPERFAMILY SSF52833 177 333 1.7E-25 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M892_00525 c08d0e4d5b4444bc15b6195b5f56e244 337 Pfam PF01323 DSBA-like thioredoxin domain 196 326 3.1E-17 T 12-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 M892_00525 c08d0e4d5b4444bc15b6195b5f56e244 337 Pfam PF01548 Transposase 7 147 1.3E-19 T 12-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 M892_00525 c08d0e4d5b4444bc15b6195b5f56e244 337 Gene3D G3DSA:3.40.30.10 157 330 2.9E-36 T 12-10-2018 M892_20660 a0d5ea77618664993899b6e1df7f1d35 352 SUPERFAMILY SSF56935 28 351 1.17E-51 T 12-10-2018 M892_20660 a0d5ea77618664993899b6e1df7f1d35 352 Gene3D G3DSA:2.40.160.10 28 352 7.3E-52 T 12-10-2018 IPR023614 Porin domain superfamily M892_20660 a0d5ea77618664993899b6e1df7f1d35 352 Pfam PF13609 Gram-negative porin 16 334 1.9E-14 T 12-10-2018 M892_20660 a0d5ea77618664993899b6e1df7f1d35 352 PRINTS PR00183 E.coli/Salmonella-type porin signature 99 121 2.5E-5 T 12-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 M892_20660 a0d5ea77618664993899b6e1df7f1d35 352 PRINTS PR00183 E.coli/Salmonella-type porin signature 28 44 2.5E-5 T 12-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 M892_20660 a0d5ea77618664993899b6e1df7f1d35 352 PRINTS PR00183 E.coli/Salmonella-type porin signature 302 321 2.5E-5 T 12-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 M892_20660 a0d5ea77618664993899b6e1df7f1d35 352 PRINTS PR00183 E.coli/Salmonella-type porin signature 155 177 2.5E-5 T 12-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 M892_24580 918445a071a4f85428d8655228f4c868 204 Gene3D G3DSA:3.40.50.150 12 150 1.4E-13 T 12-10-2018 M892_24580 918445a071a4f85428d8655228f4c868 204 SUPERFAMILY SSF53335 31 131 5.28E-14 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M892_24580 918445a071a4f85428d8655228f4c868 204 Pfam PF13649 Methyltransferase domain 54 143 1.7E-9 T 12-10-2018 M892_03660 6984d96ada3330b9b8cb3231c197bd9a 417 Pfam PF03222 Tryptophan/tyrosine permease family 28 382 6.7E-19 T 12-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 M892_23280 ea04ff2886e3339425a6a70bef6462f1 485 Pfam PF05762 VWA domain containing CoxE-like protein 316 447 9.9E-12 T 12-10-2018 IPR008912 Uncharacterised protein family CoxE-like M892_23280 ea04ff2886e3339425a6a70bef6462f1 485 Gene3D G3DSA:3.40.50.410 322 470 1.2E-7 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily M892_23280 ea04ff2886e3339425a6a70bef6462f1 485 SUPERFAMILY SSF53300 319 475 1.41E-24 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily M892_05455 277037e6d51ad386e8b1ec1bcdaaf1db 407 TIGRFAM TIGR02213 lolE_release: lipoprotein releasing system, transmembrane protein LolE 1 407 2.0E-212 T 12-10-2018 IPR011926 Lipoprotein-releasing system transmembrane protein LolC/E, gammaproteobacteria type GO:0016021|GO:0042953|GO:0042954|GO:0044874 M892_05455 277037e6d51ad386e8b1ec1bcdaaf1db 407 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 1 406 5.9E-157 T 12-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 M892_05455 277037e6d51ad386e8b1ec1bcdaaf1db 407 Pfam PF12704 MacB-like periplasmic core domain 23 215 1.8E-13 T 12-10-2018 IPR025857 MacB-like periplasmic core domain M892_05455 277037e6d51ad386e8b1ec1bcdaaf1db 407 Pfam PF02687 FtsX-like permease family 294 400 3.6E-12 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 M892_05035 c0c9cf4f1454c32e059f1578a4fe7e2f 203 Pfam PF03695 Uncharacterised protein family (UPF0149) 17 189 4.4E-36 T 12-10-2018 IPR011978 Uncharacterised protein family UPF0149 M892_05035 c0c9cf4f1454c32e059f1578a4fe7e2f 203 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 14 188 9.6E-54 T 12-10-2018 IPR011978 Uncharacterised protein family UPF0149 M892_05035 c0c9cf4f1454c32e059f1578a4fe7e2f 203 SUPERFAMILY SSF101327 15 189 1.31E-33 T 12-10-2018 IPR036255 YgfB-like superfamily M892_25115 7f3e871793e3d59f68fa335d30bee82d 153 Gene3D G3DSA:1.10.287.790 61 110 1.3E-31 T 12-10-2018 IPR027404 LuxT regulator, helix hairpin domain superfamily M892_25115 7f3e871793e3d59f68fa335d30bee82d 153 Gene3D G3DSA:1.20.5.830 111 153 4.7E-29 T 12-10-2018 IPR027402 LuxT regulator, C-terminal domain superfamily M892_25115 7f3e871793e3d59f68fa335d30bee82d 153 Gene3D G3DSA:1.10.10.60 2 60 4.3E-8 T 12-10-2018 M892_25115 7f3e871793e3d59f68fa335d30bee82d 153 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 1.8E-4 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M892_25115 7f3e871793e3d59f68fa335d30bee82d 153 SUPERFAMILY SSF46689 1 74 1.08E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_23020 b6d440d4deb2efdbe847422d78590ee2 250 Gene3D G3DSA:3.40.190.10 104 215 5.6E-78 T 12-10-2018 M892_23020 b6d440d4deb2efdbe847422d78590ee2 250 SUPERFAMILY SSF53850 25 249 4.3E-62 T 12-10-2018 M892_23020 b6d440d4deb2efdbe847422d78590ee2 250 PIRSF PIRSF004846 2 250 6.7E-70 T 12-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 M892_23020 b6d440d4deb2efdbe847422d78590ee2 250 Pfam PF13531 Bacterial extracellular solute-binding protein 26 250 8.7E-47 T 12-10-2018 M892_23020 b6d440d4deb2efdbe847422d78590ee2 250 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 31 248 6.8E-62 T 12-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 M892_23020 b6d440d4deb2efdbe847422d78590ee2 250 Gene3D G3DSA:3.40.190.10 28 249 5.6E-78 T 12-10-2018 M892_04940 c0a61cd538a61be9c1dd41248d04bbad 237 Pfam PF00563 EAL domain 10 234 5.6E-33 T 12-10-2018 IPR001633 EAL domain M892_04940 c0a61cd538a61be9c1dd41248d04bbad 237 SMART SM00052 11 237 2.7E-9 T 12-10-2018 IPR001633 EAL domain M892_04940 c0a61cd538a61be9c1dd41248d04bbad 237 Gene3D G3DSA:3.20.20.450 8 237 9.5E-38 T 12-10-2018 IPR035919 EAL domain superfamily M892_04940 c0a61cd538a61be9c1dd41248d04bbad 237 SUPERFAMILY SSF141868 10 235 6.02E-36 T 12-10-2018 IPR035919 EAL domain superfamily M892_08890 e6859160a8114186e914bb28df7f7197 311 Hamap MF_01516 Malate dehydrogenase [mdh]. 1 311 57.58 T 12-10-2018 IPR023958 Malate dehydrogenase, type 1, bacterial GO:0006099|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 M892_08890 e6859160a8114186e914bb28df7f7197 311 PIRSF PIRSF000102 1 308 4.6E-62 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 M892_08890 e6859160a8114186e914bb28df7f7197 311 Gene3D G3DSA:3.90.110.10 147 311 1.1E-54 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 M892_08890 e6859160a8114186e914bb28df7f7197 311 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 146 158 - T 12-10-2018 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263 M892_08890 e6859160a8114186e914bb28df7f7197 311 SUPERFAMILY SSF51735 1 145 3.67E-39 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_08890 e6859160a8114186e914bb28df7f7197 311 TIGRFAM TIGR01772 MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 2 310 6.1E-130 T 12-10-2018 IPR010097 Malate dehydrogenase, type 1 GO:0006099|GO:0030060 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263|Reactome: R-HSA-71403 M892_08890 e6859160a8114186e914bb28df7f7197 311 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 309 7.4E-50 T 12-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 M892_08890 e6859160a8114186e914bb28df7f7197 311 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 3.8E-47 T 12-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 M892_08890 e6859160a8114186e914bb28df7f7197 311 SUPERFAMILY SSF56327 146 309 2.32E-43 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 M892_08890 e6859160a8114186e914bb28df7f7197 311 Gene3D G3DSA:3.40.50.720 1 146 9.3E-66 T 12-10-2018 M892_09350 6013f163ac7ee0676abc46658fb8ca49 213 Gene3D G3DSA:3.30.420.10 39 206 9.7E-18 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M892_09350 6013f163ac7ee0676abc46658fb8ca49 213 SUPERFAMILY SSF53098 50 207 4.81E-49 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_09350 6013f163ac7ee0676abc46658fb8ca49 213 Pfam PF00665 Integrase core domain 52 163 3.7E-25 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 M892_22445 5c0f1e478c9cd848a3ec2ed22409e2ec 199 SUPERFAMILY SSF56925 60 165 3.14E-6 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel M892_08070 ea4a233c6f60a7b43844481d56274038 172 PRINTS PR00502 NUDIX hydrolase family signature 47 62 3.4E-8 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 M892_08070 ea4a233c6f60a7b43844481d56274038 172 PRINTS PR00502 NUDIX hydrolase family signature 33 47 3.4E-8 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 M892_08070 ea4a233c6f60a7b43844481d56274038 172 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 37.547 T 12-10-2018 IPR022927 RNA pyrophosphohydrolase RppH M892_08070 ea4a233c6f60a7b43844481d56274038 172 Gene3D G3DSA:3.90.79.10 1 159 7.6E-51 T 12-10-2018 M892_08070 ea4a233c6f60a7b43844481d56274038 172 SUPERFAMILY SSF55811 6 152 8.26E-32 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 M892_08070 ea4a233c6f60a7b43844481d56274038 172 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 M892_08070 ea4a233c6f60a7b43844481d56274038 172 Pfam PF00293 NUDIX domain 7 145 6.1E-27 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 M892_25775 cf3a2ab53167b3a4b5f8fba4719a2ce8 679 Gene3D G3DSA:3.40.50.1820 12 642 4.9E-247 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_25775 cf3a2ab53167b3a4b5f8fba4719a2ce8 679 Gene3D G3DSA:2.130.10.120 70 403 4.9E-247 T 12-10-2018 M892_25775 cf3a2ab53167b3a4b5f8fba4719a2ce8 679 Pfam PF00326 Prolyl oligopeptidase family 459 674 9.1E-70 T 12-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 M892_25775 cf3a2ab53167b3a4b5f8fba4719a2ce8 679 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 497 516 6.0E-60 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 M892_25775 cf3a2ab53167b3a4b5f8fba4719a2ce8 679 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 527 547 6.0E-60 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 M892_25775 cf3a2ab53167b3a4b5f8fba4719a2ce8 679 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 443 461 6.0E-60 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 M892_25775 cf3a2ab53167b3a4b5f8fba4719a2ce8 679 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 602 624 6.0E-60 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 M892_25775 cf3a2ab53167b3a4b5f8fba4719a2ce8 679 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 583 598 6.0E-60 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 M892_25775 cf3a2ab53167b3a4b5f8fba4719a2ce8 679 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 469 493 6.0E-60 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 M892_25775 cf3a2ab53167b3a4b5f8fba4719a2ce8 679 SUPERFAMILY SSF50993 1 407 3.92E-95 T 12-10-2018 M892_25775 cf3a2ab53167b3a4b5f8fba4719a2ce8 679 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 5 401 1.3E-120 T 12-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 M892_25775 cf3a2ab53167b3a4b5f8fba4719a2ce8 679 SUPERFAMILY SSF53474 411 663 5.75E-50 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_24485 0fedffe1a48893b522e4b9f28ee02312 102 Pfam PF03927 NapD protein 6 80 5.3E-30 T 12-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly M892_24485 0fedffe1a48893b522e4b9f28ee02312 102 Gene3D G3DSA:3.30.70.920 6 75 8.2E-23 T 12-10-2018 M892_24485 0fedffe1a48893b522e4b9f28ee02312 102 Hamap MF_02200 Chaperone NapD [napD]. 6 82 19.155 T 12-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly M892_18910 4f17c82b2af4809950f14545eb5c445f 410 SUPERFAMILY SSF51905 5 300 1.86E-44 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_18910 4f17c82b2af4809950f14545eb5c445f 410 Pfam PF01266 FAD dependent oxidoreductase 6 397 2.1E-66 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 M892_18910 4f17c82b2af4809950f14545eb5c445f 410 Gene3D G3DSA:3.30.9.10 89 359 1.4E-82 T 12-10-2018 M892_18910 4f17c82b2af4809950f14545eb5c445f 410 Gene3D G3DSA:3.50.50.60 6 393 1.4E-82 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_11740 3e65f540240ccad26599d56af6a64283 331 Pfam PF01207 Dihydrouridine synthase (Dus) 22 323 2.0E-108 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 M892_11740 3e65f540240ccad26599d56af6a64283 331 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 12 329 1.1E-130 T 12-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 M892_11740 3e65f540240ccad26599d56af6a64283 331 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 10 330 49.606 T 12-10-2018 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 M892_11740 3e65f540240ccad26599d56af6a64283 331 PIRSF PIRSF006621 9 330 1.1E-100 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 M892_11740 3e65f540240ccad26599d56af6a64283 331 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 103 121 - T 12-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 M892_11740 3e65f540240ccad26599d56af6a64283 331 SUPERFAMILY SSF51395 19 328 3.11E-89 T 12-10-2018 M892_11740 3e65f540240ccad26599d56af6a64283 331 Gene3D G3DSA:3.20.20.70 15 258 1.1E-77 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M892_11740 3e65f540240ccad26599d56af6a64283 331 Gene3D G3DSA:1.10.1200.80 260 331 2.7E-8 T 12-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 M892_07585 a5fa9b5467b6f64f7a72146b125aca0f 375 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 5 353 72.04 T 12-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 M892_07585 a5fa9b5467b6f64f7a72146b125aca0f 375 Gene3D G3DSA:1.10.150.530 1 67 4.8E-26 T 12-10-2018 M892_07585 a5fa9b5467b6f64f7a72146b125aca0f 375 PIRSF PIRSF006004 3 366 8.1E-145 T 12-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 M892_07585 a5fa9b5467b6f64f7a72146b125aca0f 375 Pfam PF04055 Radical SAM superfamily 109 283 1.0E-14 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 M892_07585 a5fa9b5467b6f64f7a72146b125aca0f 375 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 3 359 3.4E-161 T 12-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 M892_07585 a5fa9b5467b6f64f7a72146b125aca0f 375 Gene3D G3DSA:3.20.20.70 68 338 1.3E-112 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M892_07585 a5fa9b5467b6f64f7a72146b125aca0f 375 SUPERFAMILY SSF102114 103 312 9.68E-14 T 12-10-2018 M892_09910 4d2241bab1705b1a4483b6ce17ce7f3b 467 SUPERFAMILY SSF52172 2 187 4.7E-43 T 12-10-2018 IPR011006 CheY-like superfamily M892_09910 4d2241bab1705b1a4483b6ce17ce7f3b 467 SUPERFAMILY SSF46689 382 466 6.27E-20 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_09910 4d2241bab1705b1a4483b6ce17ce7f3b 467 Pfam PF00072 Response regulator receiver domain 6 115 1.7E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_09910 4d2241bab1705b1a4483b6ce17ce7f3b 467 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 228 243 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 M892_09910 4d2241bab1705b1a4483b6ce17ce7f3b 467 Pfam PF02954 Bacterial regulatory protein, Fis family 426 466 2.7E-16 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M892_09910 4d2241bab1705b1a4483b6ce17ce7f3b 467 SMART SM00448 4 115 4.5E-33 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_09910 4d2241bab1705b1a4483b6ce17ce7f3b 467 Gene3D G3DSA:3.40.50.300 132 312 6.6E-67 T 12-10-2018 M892_09910 4d2241bab1705b1a4483b6ce17ce7f3b 467 Gene3D G3DSA:1.10.8.60 313 380 2.5E-17 T 12-10-2018 M892_09910 4d2241bab1705b1a4483b6ce17ce7f3b 467 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 6 466 1.1E-236 T 12-10-2018 IPR010114 DNA-binding transcriptional regulator NtrC GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 M892_09910 4d2241bab1705b1a4483b6ce17ce7f3b 467 Gene3D G3DSA:3.40.50.2300 1 124 4.6E-40 T 12-10-2018 M892_09910 4d2241bab1705b1a4483b6ce17ce7f3b 467 SUPERFAMILY SSF52540 141 385 1.02E-73 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_09910 4d2241bab1705b1a4483b6ce17ce7f3b 467 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 355 364 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site M892_09910 4d2241bab1705b1a4483b6ce17ce7f3b 467 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 166 179 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 M892_09910 4d2241bab1705b1a4483b6ce17ce7f3b 467 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 432 449 1.3E-7 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M892_09910 4d2241bab1705b1a4483b6ce17ce7f3b 467 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 449 467 1.3E-7 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M892_09910 4d2241bab1705b1a4483b6ce17ce7f3b 467 SMART SM00382 162 316 1.3E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_09910 4d2241bab1705b1a4483b6ce17ce7f3b 467 Pfam PF00158 Sigma-54 interaction domain 142 308 6.8E-71 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 M892_09910 4d2241bab1705b1a4483b6ce17ce7f3b 467 Gene3D G3DSA:1.10.10.60 381 467 1.9E-26 T 12-10-2018 M892_18915 17310ba3b21dfaa08d0d56910e59a41f 173 Gene3D G3DSA:3.30.460.10 6 172 8.4E-38 T 12-10-2018 M892_18915 17310ba3b21dfaa08d0d56910e59a41f 173 SUPERFAMILY SSF81301 12 171 4.9E-37 T 12-10-2018 M892_18915 17310ba3b21dfaa08d0d56910e59a41f 173 Pfam PF04229 GrpB protein 10 170 1.1E-36 T 12-10-2018 IPR007344 GrpB/Dephospho-CoA kinase M892_01445 45534d977ee4d4e728f697fc30e71a35 395 Gene3D G3DSA:3.10.310.10 13 387 3.3E-148 T 12-10-2018 M892_01445 45534d977ee4d4e728f697fc30e71a35 395 Pfam PF04303 PrpF protein 8 390 2.1E-172 T 12-10-2018 IPR007400 PrpF protein M892_01445 45534d977ee4d4e728f697fc30e71a35 395 SUPERFAMILY SSF54506 188 393 1.57E-75 T 12-10-2018 M892_01445 45534d977ee4d4e728f697fc30e71a35 395 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 7 394 1.5E-228 T 12-10-2018 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 M892_01445 45534d977ee4d4e728f697fc30e71a35 395 SUPERFAMILY SSF54506 5 184 5.57E-71 T 12-10-2018 M892_01445 45534d977ee4d4e728f697fc30e71a35 395 Gene3D G3DSA:3.10.310.10 183 373 3.3E-148 T 12-10-2018 M892_27500 5658733bec74172483d7e8e52f0d4715 176 Gene3D G3DSA:3.40.630.30 1 175 3.0E-38 T 12-10-2018 M892_27500 5658733bec74172483d7e8e52f0d4715 176 SUPERFAMILY SSF55729 2 174 7.22E-37 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_27500 5658733bec74172483d7e8e52f0d4715 176 Pfam PF13302 Acetyltransferase (GNAT) domain 5 148 1.3E-21 T 12-10-2018 IPR000182 GNAT domain M892_00920 58d31eff2b7d32d3499b4af591654180 165 Gene3D G3DSA:3.30.70.20 37 101 7.7E-13 T 12-10-2018 M892_00920 58d31eff2b7d32d3499b4af591654180 165 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 78 89 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M892_00920 58d31eff2b7d32d3499b4af591654180 165 Pfam PF12838 4Fe-4S dicluster domain 117 154 8.8E-7 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M892_00920 58d31eff2b7d32d3499b4af591654180 165 Pfam PF12838 4Fe-4S dicluster domain 47 90 6.7E-8 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M892_00920 58d31eff2b7d32d3499b4af591654180 165 SUPERFAMILY SSF54862 41 162 2.56E-20 T 12-10-2018 M892_00920 58d31eff2b7d32d3499b4af591654180 165 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 47 58 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M892_00920 58d31eff2b7d32d3499b4af591654180 165 Gene3D G3DSA:3.30.70.20 104 160 4.0E-10 T 12-10-2018 M892_01495 e26fce09afb421ea6884af571ef50d0a 232 Pfam PF06508 Queuosine biosynthesis protein QueC 3 212 1.4E-85 T 12-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 M892_01495 e26fce09afb421ea6884af571ef50d0a 232 PIRSF PIRSF006293 1 224 5.7E-84 T 12-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 M892_01495 e26fce09afb421ea6884af571ef50d0a 232 SUPERFAMILY SSF52402 1 211 3.53E-67 T 12-10-2018 M892_01495 e26fce09afb421ea6884af571ef50d0a 232 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 205 1.3E-83 T 12-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 M892_01495 e26fce09afb421ea6884af571ef50d0a 232 Gene3D G3DSA:3.40.50.620 1 230 2.6E-80 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M892_01495 e26fce09afb421ea6884af571ef50d0a 232 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 218 51.068 T 12-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 M892_00065 647636341150afdaed8c754859c44148 401 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 387 1.2E-117 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 M892_00065 647636341150afdaed8c754859c44148 401 SUPERFAMILY SSF53383 21 388 9.39E-98 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M892_00065 647636341150afdaed8c754859c44148 401 PIRSF PIRSF001434 1 391 4.9E-125 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 M892_00065 647636341150afdaed8c754859c44148 401 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 7 389 4.7E-171 T 12-10-2018 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 M892_00065 647636341150afdaed8c754859c44148 401 Gene3D G3DSA:3.90.1150.10 256 391 1.2E-41 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M892_00065 647636341150afdaed8c754859c44148 401 Gene3D G3DSA:3.40.640.10 3 255 4.8E-76 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M892_00065 647636341150afdaed8c754859c44148 401 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 199 213 - T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 M892_14385 00c63ff3a8ce03c76ca3f89b643ee526 230 Pfam PF00691 OmpA family 119 212 2.9E-18 T 12-10-2018 IPR006665 OmpA-like domain M892_14385 00c63ff3a8ce03c76ca3f89b643ee526 230 PRINTS PR01021 OMPA domain signature 148 163 9.1E-13 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M892_14385 00c63ff3a8ce03c76ca3f89b643ee526 230 PRINTS PR01021 OMPA domain signature 119 141 9.1E-13 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M892_14385 00c63ff3a8ce03c76ca3f89b643ee526 230 PRINTS PR01021 OMPA domain signature 163 179 9.1E-13 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M892_14385 00c63ff3a8ce03c76ca3f89b643ee526 230 SUPERFAMILY SSF103088 113 218 1.16E-28 T 12-10-2018 IPR036737 OmpA-like domain superfamily M892_14385 00c63ff3a8ce03c76ca3f89b643ee526 230 Gene3D G3DSA:3.30.1330.60 95 221 3.3E-30 T 12-10-2018 IPR036737 OmpA-like domain superfamily M892_27015 87b7bd42602247d8e78d57a82f57f14b 209 SMART SM00857 3 134 5.2E-9 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 M892_27015 87b7bd42602247d8e78d57a82f57f14b 209 SUPERFAMILY SSF53041 1 137 3.92E-19 T 12-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 M892_27015 87b7bd42602247d8e78d57a82f57f14b 209 Gene3D G3DSA:3.40.50.1390 3 124 3.8E-14 T 12-10-2018 M892_27015 87b7bd42602247d8e78d57a82f57f14b 209 Pfam PF00239 Resolvase, N terminal domain 4 137 7.8E-17 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 M892_25645 37346d715d4b71bf2ac08357c9495333 267 SMART SM00422 10 79 4.9E-16 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 M892_25645 37346d715d4b71bf2ac08357c9495333 267 SUPERFAMILY SSF46955 10 101 6.87E-17 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily M892_25645 37346d715d4b71bf2ac08357c9495333 267 Pfam PF13411 MerR HTH family regulatory protein 10 76 6.4E-17 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 M892_25645 37346d715d4b71bf2ac08357c9495333 267 Gene3D G3DSA:1.10.1660.10 4 76 8.8E-25 T 12-10-2018 M892_07175 3374a8034cc2977ad254f852354c3db2 356 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 50 317 9.2E-72 T 12-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 M892_07175 3374a8034cc2977ad254f852354c3db2 356 SUPERFAMILY SSF53187 22 319 3.64E-77 T 12-10-2018 M892_07175 3374a8034cc2977ad254f852354c3db2 356 PIRSF PIRSF039012 3 325 3.3E-94 T 12-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 M892_07175 3374a8034cc2977ad254f852354c3db2 356 Gene3D G3DSA:3.40.630.10 15 320 1.6E-92 T 12-10-2018 M892_10705 79f054bac9fc54e9ce7a9bf36b72c769 318 Pfam PF11059 Protein of unknown function (DUF2860) 26 317 8.4E-111 T 12-10-2018 IPR016896 Protein of unknown function DUF2860 M892_10705 79f054bac9fc54e9ce7a9bf36b72c769 318 PIRSF PIRSF028696 1 318 2.5E-118 T 12-10-2018 IPR016896 Protein of unknown function DUF2860 M892_16830 4449ce1666ef9fbb47c44353bc72c0de 385 SUPERFAMILY SSF53098 8 372 1.9E-53 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_16830 4449ce1666ef9fbb47c44353bc72c0de 385 Pfam PF01609 Transposase DDE domain 130 292 3.1E-15 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_08925 5f6da52d8166ebf8ed07b72126a7a645 330 TIGRFAM TIGR01276 thiB: thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein 12 329 2.2E-148 T 12-10-2018 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria GO:0015888|GO:0030288|GO:0030975 M892_08925 5f6da52d8166ebf8ed07b72126a7a645 330 Pfam PF13343 Bacterial extracellular solute-binding protein 76 294 7.2E-22 T 12-10-2018 M892_08925 5f6da52d8166ebf8ed07b72126a7a645 330 Gene3D G3DSA:3.40.190.10 26 300 1.5E-119 T 12-10-2018 M892_08925 5f6da52d8166ebf8ed07b72126a7a645 330 SUPERFAMILY SSF53850 24 325 2.08E-69 T 12-10-2018 M892_08925 5f6da52d8166ebf8ed07b72126a7a645 330 Gene3D G3DSA:3.40.190.10 126 325 1.5E-119 T 12-10-2018 M892_08925 5f6da52d8166ebf8ed07b72126a7a645 330 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 21 324 1.7E-145 T 12-10-2018 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter GO:0015888|GO:0030975 M892_22655 9bc0418063312ce96be8de7b12310050 110 SUPERFAMILY SSF54913 5 106 4.82E-31 T 12-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta M892_22655 9bc0418063312ce96be8de7b12310050 110 Pfam PF03091 CutA1 divalent ion tolerance protein 8 104 7.8E-31 T 12-10-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 M892_22655 9bc0418063312ce96be8de7b12310050 110 Gene3D G3DSA:3.30.70.120 1 108 2.0E-33 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal M892_23370 ce5d8ad5f5562a8a38d3f1d15852a84d 379 Gene3D G3DSA:3.60.21.10 1 266 2.8E-81 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like M892_23370 ce5d8ad5f5562a8a38d3f1d15852a84d 379 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 268 353 3.6E-10 T 12-10-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain M892_23370 ce5d8ad5f5562a8a38d3f1d15852a84d 379 SUPERFAMILY SSF56300 1 320 2.05E-61 T 12-10-2018 M892_23370 ce5d8ad5f5562a8a38d3f1d15852a84d 379 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 245 1.2E-57 T 12-10-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 M892_23370 ce5d8ad5f5562a8a38d3f1d15852a84d 379 Pfam PF00149 Calcineurin-like phosphoesterase 1 218 1.7E-17 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 M892_02205 b9bb60726ea11553ed53c419af31d013 127 SUPERFAMILY SSF47226 11 120 7.59E-21 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 M892_02205 b9bb60726ea11553ed53c419af31d013 127 Pfam PF01627 Hpt domain 34 108 1.6E-9 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 M892_02205 b9bb60726ea11553ed53c419af31d013 127 Gene3D G3DSA:1.20.120.160 6 118 4.6E-19 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 M892_00140 74869d1c1961d5e1933844bf8aa20367 569 SUPERFAMILY SSF161098 302 541 1.53E-25 T 12-10-2018 IPR035906 MetI-like superfamily M892_00140 74869d1c1961d5e1933844bf8aa20367 569 SUPERFAMILY SSF161098 5 276 1.09E-23 T 12-10-2018 IPR035906 MetI-like superfamily M892_00140 74869d1c1961d5e1933844bf8aa20367 569 Gene3D G3DSA:1.10.3720.10 3 280 2.2E-18 T 12-10-2018 IPR035906 MetI-like superfamily M892_00140 74869d1c1961d5e1933844bf8aa20367 569 Gene3D G3DSA:1.10.3720.10 296 548 1.0E-20 T 12-10-2018 IPR035906 MetI-like superfamily M892_15430 888a7d45bb5d3efcfc0cb682355194bd 263 PRINTS PR01805 VacJ lipoprotein signature 116 133 1.9E-29 T 12-10-2018 IPR007428 MlaA lipoprotein GO:0016020 M892_15430 888a7d45bb5d3efcfc0cb682355194bd 263 PRINTS PR01805 VacJ lipoprotein signature 47 60 1.9E-29 T 12-10-2018 IPR007428 MlaA lipoprotein GO:0016020 M892_15430 888a7d45bb5d3efcfc0cb682355194bd 263 PRINTS PR01805 VacJ lipoprotein signature 153 170 1.9E-29 T 12-10-2018 IPR007428 MlaA lipoprotein GO:0016020 M892_15430 888a7d45bb5d3efcfc0cb682355194bd 263 PRINTS PR01805 VacJ lipoprotein signature 65 81 1.9E-29 T 12-10-2018 IPR007428 MlaA lipoprotein GO:0016020 M892_15430 888a7d45bb5d3efcfc0cb682355194bd 263 Pfam PF04333 MlaA lipoprotein 45 237 1.5E-61 T 12-10-2018 IPR007428 MlaA lipoprotein GO:0016020 M892_09900 0f1933200520251f46d73f81b3872352 193 Pfam PF13511 Domain of unknown function (DUF4124) 15 61 3.9E-12 T 12-10-2018 IPR025392 Domain of unknown function DUF4124 M892_20605 bb8da0f46ae569827d0669ec97b37141 317 SUPERFAMILY SSF53807 50 311 2.75E-51 T 12-10-2018 M892_20605 bb8da0f46ae569827d0669ec97b37141 317 Pfam PF01497 Periplasmic binding protein 55 285 2.2E-24 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain M892_20605 bb8da0f46ae569827d0669ec97b37141 317 Gene3D G3DSA:3.40.50.1980 39 138 5.0E-25 T 12-10-2018 M892_20605 bb8da0f46ae569827d0669ec97b37141 317 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 72 90 6.8E-6 T 12-10-2018 M892_20605 bb8da0f46ae569827d0669ec97b37141 317 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 103 118 6.8E-6 T 12-10-2018 M892_20605 bb8da0f46ae569827d0669ec97b37141 317 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 292 305 6.8E-6 T 12-10-2018 M892_20605 bb8da0f46ae569827d0669ec97b37141 317 Gene3D G3DSA:3.40.50.1980 141 313 2.1E-47 T 12-10-2018 M892_27570 0b067eccff9cc9e18839dae3d12b6c78 195 Pfam PF00924 Mechanosensitive ion channel 65 170 2.7E-10 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 M892_27570 0b067eccff9cc9e18839dae3d12b6c78 195 Gene3D G3DSA:2.30.30.60 120 171 5.9E-6 T 12-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily M892_27570 0b067eccff9cc9e18839dae3d12b6c78 195 SUPERFAMILY SSF50182 105 171 1.9E-11 T 12-10-2018 IPR010920 LSM domain superfamily M892_07670 b94fb7376bbc82844226b347d4bc02c0 109 PRINTS PR01853 Bacterial YajC preprotein translocase signature 57 75 9.6E-16 T 12-10-2018 IPR003849 Preprotein translocase YajC M892_07670 b94fb7376bbc82844226b347d4bc02c0 109 PRINTS PR01853 Bacterial YajC preprotein translocase signature 19 39 9.6E-16 T 12-10-2018 IPR003849 Preprotein translocase YajC M892_07670 b94fb7376bbc82844226b347d4bc02c0 109 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 19 101 3.3E-30 T 12-10-2018 IPR003849 Preprotein translocase YajC M892_07670 b94fb7376bbc82844226b347d4bc02c0 109 SMART SM01323 17 101 2.3E-38 T 12-10-2018 IPR003849 Preprotein translocase YajC M892_07670 b94fb7376bbc82844226b347d4bc02c0 109 Pfam PF02699 Preprotein translocase subunit 21 98 6.0E-26 T 12-10-2018 IPR003849 Preprotein translocase YajC M892_12720 39561947db191f26c35a87fdef8e1122 365 Pfam PF14559 Tetratricopeptide repeat 187 243 1.4E-6 T 12-10-2018 M892_12720 39561947db191f26c35a87fdef8e1122 365 SMART SM00028 211 244 0.022 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_12720 39561947db191f26c35a87fdef8e1122 365 SMART SM00028 311 344 430.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_12720 39561947db191f26c35a87fdef8e1122 365 SMART SM00028 277 310 41.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_12720 39561947db191f26c35a87fdef8e1122 365 SMART SM00028 177 210 48.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_12720 39561947db191f26c35a87fdef8e1122 365 Gene3D G3DSA:1.25.40.10 159 270 9.1E-14 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_12720 39561947db191f26c35a87fdef8e1122 365 SUPERFAMILY SSF48452 177 338 3.79E-17 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_12720 39561947db191f26c35a87fdef8e1122 365 Gene3D G3DSA:1.25.40.10 271 363 2.2E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_28275 f317bdc562c22b7dd492dd51cbdf8523 305 Gene3D G3DSA:3.40.140.10 182 305 1.2E-39 T 12-10-2018 M892_28275 f317bdc562c22b7dd492dd51cbdf8523 305 Pfam PF04002 RadC-like JAB domain 185 303 1.6E-40 T 12-10-2018 IPR025657 RadC-like JAB domain M892_28275 f317bdc562c22b7dd492dd51cbdf8523 305 TIGRFAM TIGR00608 radc: DNA repair protein RadC 176 305 3.1E-42 T 12-10-2018 IPR001405 Uncharacterised protein family UPF0758 M892_28275 f317bdc562c22b7dd492dd51cbdf8523 305 SUPERFAMILY SSF102712 191 271 1.57E-6 T 12-10-2018 M892_28275 f317bdc562c22b7dd492dd51cbdf8523 305 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 254 259 - T 12-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site M892_22035 fb7802794361039c0206b258f2dd0ae6 317 SUPERFAMILY SSF56219 5 314 5.5E-32 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily M892_22035 fb7802794361039c0206b258f2dd0ae6 317 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 47 306 1.7E-9 T 12-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase M892_22035 fb7802794361039c0206b258f2dd0ae6 317 Gene3D G3DSA:3.60.10.10 2 310 9.8E-30 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily M892_20945 739341427d09b87d141a442e9a3cabf8 68 SMART SM00530 11 66 1.4E-14 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 M892_20945 739341427d09b87d141a442e9a3cabf8 68 SUPERFAMILY SSF47413 2 67 9.38E-19 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 M892_20945 739341427d09b87d141a442e9a3cabf8 68 Pfam PF01381 Helix-turn-helix 12 64 1.8E-15 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 M892_20945 739341427d09b87d141a442e9a3cabf8 68 Gene3D G3DSA:1.10.260.40 1 68 2.7E-21 T 12-10-2018 M892_18900 052e0e6ea85d78c8c622c7b0e6fdc5d9 336 Gene3D G3DSA:3.40.190.10 120 263 1.1E-89 T 12-10-2018 M892_18900 052e0e6ea85d78c8c622c7b0e6fdc5d9 336 Pfam PF16868 NMT1-like family 32 326 1.4E-111 T 12-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family M892_18900 052e0e6ea85d78c8c622c7b0e6fdc5d9 336 Gene3D G3DSA:3.40.190.10 32 326 1.1E-89 T 12-10-2018 M892_18900 052e0e6ea85d78c8c622c7b0e6fdc5d9 336 SUPERFAMILY SSF53850 29 327 1.18E-64 T 12-10-2018 M892_18900 052e0e6ea85d78c8c622c7b0e6fdc5d9 336 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 3 326 4.6E-108 T 12-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family M892_18305 1785da3c5bdef46cb71af0c63ba6170d 142 SUPERFAMILY SSF46785 3 140 7.29E-36 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_18305 1785da3c5bdef46cb71af0c63ba6170d 142 Gene3D G3DSA:1.10.10.10 1 142 9.2E-39 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_18305 1785da3c5bdef46cb71af0c63ba6170d 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 118 138 3.0E-14 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M892_18305 1785da3c5bdef46cb71af0c63ba6170d 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 52 68 3.0E-14 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M892_18305 1785da3c5bdef46cb71af0c63ba6170d 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 104 3.0E-14 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M892_18305 1785da3c5bdef46cb71af0c63ba6170d 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 84 3.0E-14 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M892_18305 1785da3c5bdef46cb71af0c63ba6170d 142 Pfam PF01047 MarR family 35 92 3.9E-17 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M892_18305 1785da3c5bdef46cb71af0c63ba6170d 142 SMART SM00347 28 128 3.5E-28 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M892_12310 3618db1b18fd89584c98fa05b9f493ea 131 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 5 131 8.9E-56 T 12-10-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 M892_12310 3618db1b18fd89584c98fa05b9f493ea 131 SUPERFAMILY SSF75169 6 131 6.87E-39 T 12-10-2018 IPR027396 DsrEFH-like M892_12310 3618db1b18fd89584c98fa05b9f493ea 131 Pfam PF02635 DsrE/DsrF-like family 6 131 8.2E-29 T 12-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein M892_12310 3618db1b18fd89584c98fa05b9f493ea 131 Gene3D G3DSA:3.40.1260.10 1 131 2.9E-54 T 12-10-2018 IPR027396 DsrEFH-like M892_05945 edbb223f0ab5b9c45b22b0683f179f4b 90 SMART SM00411 1 90 6.0E-43 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 M892_05945 edbb223f0ab5b9c45b22b0683f179f4b 90 Gene3D G3DSA:4.10.520.10 1 90 9.5E-36 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 M892_05945 edbb223f0ab5b9c45b22b0683f179f4b 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.9E-20 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 M892_05945 edbb223f0ab5b9c45b22b0683f179f4b 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.9E-20 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 M892_05945 edbb223f0ab5b9c45b22b0683f179f4b 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.9E-20 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 M892_05945 edbb223f0ab5b9c45b22b0683f179f4b 90 SUPERFAMILY SSF47729 1 90 1.18E-31 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 M892_05945 edbb223f0ab5b9c45b22b0683f179f4b 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.1E-33 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 M892_05945 edbb223f0ab5b9c45b22b0683f179f4b 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 12-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 M892_08395 8d96e3f267eb7c3353d98866e156598e 360 Pfam PF00953 Glycosyl transferase family 4 99 283 3.8E-37 T 12-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 M892_08395 8d96e3f267eb7c3353d98866e156598e 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 12-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 M892_08395 8d96e3f267eb7c3353d98866e156598e 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 9.3E-6 T 12-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 M892_08395 8d96e3f267eb7c3353d98866e156598e 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 25.434 T 12-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 M892_08395 8d96e3f267eb7c3353d98866e156598e 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 360 5.2E-157 T 12-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 M892_08395 8d96e3f267eb7c3353d98866e156598e 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 12-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 M892_20015 401e2e256828a2c8973aa481c7e73f50 236 SUPERFAMILY SSF81901 50 170 1.31E-6 T 12-10-2018 M892_20015 401e2e256828a2c8973aa481c7e73f50 236 Gene3D G3DSA:1.25.40.10 42 186 8.4E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_21550 ca1fa2729ebc51955a2ea464867d72c8 399 SUPERFAMILY SSF53098 1 382 2.12E-52 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_21550 ca1fa2729ebc51955a2ea464867d72c8 399 Pfam PF01609 Transposase DDE domain 92 327 6.8E-16 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_23965 b2976bcbc9e14acdca08fc11d3148252 243 SUPERFAMILY SSF89733 1 132 3.14E-5 T 12-10-2018 IPR036111 Malate/L-sulfolactate/L-lactate dehydrogenase-like superfamily GO:0016491|GO:0055114 M892_23965 b2976bcbc9e14acdca08fc11d3148252 243 Pfam PF12525 Protein of unknown function (DUF3726) 3 78 1.4E-24 T 12-10-2018 IPR022201 Protein of unknown function DUF3726 M892_11170 37c1f3be14db9d3df9db0f001afa64d6 198 Pfam PF03942 DTW domain 5 183 8.6E-44 T 12-10-2018 IPR005636 DTW M892_11170 37c1f3be14db9d3df9db0f001afa64d6 198 SMART SM01144 1 192 5.1E-54 T 12-10-2018 IPR005636 DTW M892_03460 47c205544469141719f256a269c324ea 88 SUPERFAMILY SSF47413 3 77 5.63E-15 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 M892_03460 47c205544469141719f256a269c324ea 88 SMART SM00530 3 58 4.3E-10 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 M892_03460 47c205544469141719f256a269c324ea 88 Gene3D G3DSA:1.10.260.40 1 76 4.7E-14 T 12-10-2018 M892_03460 47c205544469141719f256a269c324ea 88 Pfam PF01381 Helix-turn-helix 4 52 1.0E-11 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 M892_17985 fa38c46b1da8a673bfc595b4c81950c0 446 Pfam PF01554 MatE 19 179 5.7E-25 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M892_17985 fa38c46b1da8a673bfc595b4c81950c0 446 Pfam PF01554 MatE 247 404 6.7E-22 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M892_17985 fa38c46b1da8a673bfc595b4c81950c0 446 PIRSF PIRSF006603 2 446 1.6E-66 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M892_17985 fa38c46b1da8a673bfc595b4c81950c0 446 TIGRFAM TIGR00797 matE: MATE efflux family protein 19 417 1.3E-57 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M892_02670 f18f843e20bd53e6f727bf0cf9a07772 182 PIRSF PIRSF006135 1 178 2.7E-50 T 12-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 M892_02670 f18f843e20bd53e6f727bf0cf9a07772 182 Gene3D G3DSA:3.40.50.300 3 176 8.1E-57 T 12-10-2018 M892_02670 f18f843e20bd53e6f727bf0cf9a07772 182 SUPERFAMILY SSF52540 4 176 8.39E-51 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_02670 f18f843e20bd53e6f727bf0cf9a07772 182 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 4 175 8.9E-57 T 12-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 M892_20975 a0eb4644130d5895ced99fd33a7f9240 1585 Gene3D G3DSA:3.30.1330.60 615 771 1.5E-8 T 12-10-2018 IPR036737 OmpA-like domain superfamily M892_20975 a0eb4644130d5895ced99fd33a7f9240 1585 SUPERFAMILY SSF103088 642 768 5.36E-10 T 12-10-2018 IPR036737 OmpA-like domain superfamily M892_11730 577a4194789d6a27b6b4370539d592fb 329 Gene3D G3DSA:3.30.450.20 3 144 8.9E-9 T 12-10-2018 M892_11730 577a4194789d6a27b6b4370539d592fb 329 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 144 307 1.3E-51 T 12-10-2018 IPR000160 GGDEF domain M892_11730 577a4194789d6a27b6b4370539d592fb 329 Pfam PF00990 Diguanylate cyclase, GGDEF domain 148 304 2.2E-45 T 12-10-2018 IPR000160 GGDEF domain M892_11730 577a4194789d6a27b6b4370539d592fb 329 SMART SM00267 136 308 3.0E-57 T 12-10-2018 IPR000160 GGDEF domain M892_11730 577a4194789d6a27b6b4370539d592fb 329 SUPERFAMILY SSF55785 4 134 4.61E-6 T 12-10-2018 IPR035965 PAS domain superfamily M892_11730 577a4194789d6a27b6b4370539d592fb 329 Gene3D G3DSA:3.30.70.270 145 311 4.7E-59 T 12-10-2018 M892_11730 577a4194789d6a27b6b4370539d592fb 329 SUPERFAMILY SSF55073 152 308 1.73E-51 T 12-10-2018 IPR029787 Nucleotide cyclase M892_03110 58d18859bed647f5a554f4507e9aa247 244 Pfam PF02698 DUF218 domain 61 193 2.7E-21 T 12-10-2018 IPR003848 Domain of unknown function DUF218 M892_18235 fcdee97cfa355277c684dc434fdaf1e4 105 Gene3D G3DSA:2.40.10.320 1 58 1.6E-5 T 12-10-2018 M892_18235 fcdee97cfa355277c684dc434fdaf1e4 105 Pfam PF13642 protein structure with unknown function 4 103 2.4E-32 T 12-10-2018 IPR025284 Protein of unknown function DUF4144 M892_15120 3c146b45f30ee1840a8e19d84b349f13 156 Pfam PF00578 AhpC/TSA family 7 134 1.1E-34 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 M892_15120 3c146b45f30ee1840a8e19d84b349f13 156 PIRSF PIRSF000239 1 145 7.9E-17 T 12-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 M892_15120 3c146b45f30ee1840a8e19d84b349f13 156 Gene3D G3DSA:3.40.30.10 3 155 4.4E-45 T 12-10-2018 M892_15120 3c146b45f30ee1840a8e19d84b349f13 156 SUPERFAMILY SSF52833 4 154 9.58E-47 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M892_21325 bd5c102c382026f99e3b5ede1f1ee744 6211 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 6086 6104 - T 12-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site M892_21325 bd5c102c382026f99e3b5ede1f1ee744 6211 SUPERFAMILY SSF51120 5998 6166 5.89E-15 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal M892_21325 bd5c102c382026f99e3b5ede1f1ee744 6211 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 6119 6208 2.1E-10 T 12-10-2018 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass M892_21325 bd5c102c382026f99e3b5ede1f1ee744 6211 PRINTS PR00313 NodO calcium binding signature 6069 6080 1.4E-5 T 12-10-2018 M892_21325 bd5c102c382026f99e3b5ede1f1ee744 6211 PRINTS PR00313 NodO calcium binding signature 6081 6089 1.4E-5 T 12-10-2018 M892_21325 bd5c102c382026f99e3b5ede1f1ee744 6211 PRINTS PR00313 NodO calcium binding signature 6099 6108 1.4E-5 T 12-10-2018 M892_21325 bd5c102c382026f99e3b5ede1f1ee744 6211 PRINTS PR00313 NodO calcium binding signature 6090 6098 1.4E-5 T 12-10-2018 M892_21325 bd5c102c382026f99e3b5ede1f1ee744 6211 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1960 2094 2.2E-55 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain M892_21325 bd5c102c382026f99e3b5ede1f1ee744 6211 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1102 1236 1.2E-54 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain M892_21325 bd5c102c382026f99e3b5ede1f1ee744 6211 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2675 2816 3.3E-53 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain M892_21325 bd5c102c382026f99e3b5ede1f1ee744 6211 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2103 2243 7.2E-53 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain M892_21325 bd5c102c382026f99e3b5ede1f1ee744 6211 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2974 3121 2.8E-46 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain M892_21325 bd5c102c382026f99e3b5ede1f1ee744 6211 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1674 1814 5.1E-55 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain M892_21325 bd5c102c382026f99e3b5ede1f1ee744 6211 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1245 1383 3.1E-53 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain M892_21325 bd5c102c382026f99e3b5ede1f1ee744 6211 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 673 812 2.2E-52 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain M892_21325 bd5c102c382026f99e3b5ede1f1ee744 6211 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2532 2671 6.3E-56 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain M892_21325 bd5c102c382026f99e3b5ede1f1ee744 6211 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 3123 3264 1.2E-38 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain M892_21325 bd5c102c382026f99e3b5ede1f1ee744 6211 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 816 956 1.7E-53 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain M892_21325 bd5c102c382026f99e3b5ede1f1ee744 6211 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2389 2529 1.9E-54 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain M892_21325 bd5c102c382026f99e3b5ede1f1ee744 6211 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 959 1099 2.3E-57 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain M892_21325 bd5c102c382026f99e3b5ede1f1ee744 6211 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1817 1957 1.5E-57 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain M892_21325 bd5c102c382026f99e3b5ede1f1ee744 6211 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 3425 3570 1.7E-41 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain M892_21325 bd5c102c382026f99e3b5ede1f1ee744 6211 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2821 2967 5.9E-43 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain M892_21325 bd5c102c382026f99e3b5ede1f1ee744 6211 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1531 1671 1.8E-53 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain M892_21325 bd5c102c382026f99e3b5ede1f1ee744 6211 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 3575 3732 1.1E-46 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain M892_21325 bd5c102c382026f99e3b5ede1f1ee744 6211 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2246 2384 9.6E-55 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain M892_21325 bd5c102c382026f99e3b5ede1f1ee744 6211 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 512 671 1.8E-25 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain M892_21325 bd5c102c382026f99e3b5ede1f1ee744 6211 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1388 1526 1.1E-54 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain M892_21325 bd5c102c382026f99e3b5ede1f1ee744 6211 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 3272 3417 4.9E-46 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain M892_21325 bd5c102c382026f99e3b5ede1f1ee744 6211 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 6077 6095 - T 12-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site M892_21325 bd5c102c382026f99e3b5ede1f1ee744 6211 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 995 1086 0.0011 T 12-10-2018 IPR010221 VCBS repeat M892_21325 bd5c102c382026f99e3b5ede1f1ee744 6211 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1853 1944 0.0011 T 12-10-2018 IPR010221 VCBS repeat M892_10830 3968d602216235b5fe7cdb34607618ac 87 Gene3D G3DSA:3.30.160.140 1 87 6.9E-32 T 12-10-2018 IPR036692 Shew3726-like superfamily M892_10830 3968d602216235b5fe7cdb34607618ac 87 SUPERFAMILY SSF160272 1 86 7.85E-29 T 12-10-2018 IPR036692 Shew3726-like superfamily M892_10830 3968d602216235b5fe7cdb34607618ac 87 Pfam PF07369 Protein of unknown function (DUF1488) 5 85 1.9E-24 T 12-10-2018 IPR009962 Protein of unknown function DUF1488 M892_20785 391c51aa1c7d7af4d69228d635c7c6ca 333 Gene3D G3DSA:1.10.10.60 9 59 1.1E-18 T 12-10-2018 M892_20785 391c51aa1c7d7af4d69228d635c7c6ca 333 SUPERFAMILY SSF100950 70 320 4.35E-63 T 12-10-2018 IPR037171 NagB/RpiA transferase-like M892_20785 391c51aa1c7d7af4d69228d635c7c6ca 333 Gene3D G3DSA:3.40.50.1360 60 325 6.5E-79 T 12-10-2018 M892_20785 391c51aa1c7d7af4d69228d635c7c6ca 333 Pfam PF04198 Putative sugar-binding domain 66 320 9.3E-77 T 12-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 M892_01575 e039f3a329c2ebbe16a3b899897ad0c8 220 ProSitePatterns PS01243 Bax inhibitor-1 family signature. 88 118 - T 12-10-2018 IPR006213 Bax inhibitor 1, conserved site GO:0016021|GO:0043066 M892_01575 e039f3a329c2ebbe16a3b899897ad0c8 220 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 19 214 1.2E-38 T 12-10-2018 IPR006214 Bax inhibitor 1-related M892_17930 aa7c0045b5f1786adc62c10349438830 432 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 98 403 1.0E-50 T 12-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 M892_17930 aa7c0045b5f1786adc62c10349438830 432 Gene3D G3DSA:2.40.170.10 66 432 9.5E-72 T 12-10-2018 IPR036998 Porin, LamB-type superfamily GO:0015288|GO:0016020|GO:0034219 M892_17930 aa7c0045b5f1786adc62c10349438830 432 SUPERFAMILY SSF56935 67 432 1.74E-93 T 12-10-2018 M892_17930 aa7c0045b5f1786adc62c10349438830 432 Pfam PF02264 LamB porin 68 432 6.3E-78 T 12-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 M892_06575 67c6aefb02cf535fe271c464feea946e 437 Pfam PF07559 Flagellar basal body protein FlaE 181 317 2.8E-22 T 12-10-2018 IPR011491 Flagellar hook protein FlgE M892_06575 67c6aefb02cf535fe271c464feea946e 437 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 8 28 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site M892_06575 67c6aefb02cf535fe271c464feea946e 437 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 2 419 1.7E-95 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G M892_06575 67c6aefb02cf535fe271c464feea946e 437 Pfam PF00460 Flagella basal body rod protein 3 32 6.3E-10 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 M892_06575 67c6aefb02cf535fe271c464feea946e 437 Gene3D G3DSA:2.60.98.20 154 319 2.9E-22 T 12-10-2018 IPR037058 Flagellar hook protein FlgE superfamily M892_06575 67c6aefb02cf535fe271c464feea946e 437 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 358 436 3.7E-16 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain M892_06575 67c6aefb02cf535fe271c464feea946e 437 SUPERFAMILY SSF117143 78 398 7.32E-69 T 12-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like M892_07160 2a4b47acf6a3659d61ae1e5ec4c62686 490 SUPERFAMILY SSF53187 15 486 3.01E-62 T 12-10-2018 M892_07160 2a4b47acf6a3659d61ae1e5ec4c62686 490 Pfam PF01546 Peptidase family M20/M25/M40 77 473 1.7E-20 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 M892_07160 2a4b47acf6a3659d61ae1e5ec4c62686 490 Pfam PF07687 Peptidase dimerisation domain 211 296 3.2E-7 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain M892_07160 2a4b47acf6a3659d61ae1e5ec4c62686 490 Gene3D G3DSA:3.40.630.10 1 250 3.4E-65 T 12-10-2018 M892_07160 2a4b47acf6a3659d61ae1e5ec4c62686 490 Gene3D G3DSA:3.40.630.10 377 490 3.5E-24 T 12-10-2018 M892_07160 2a4b47acf6a3659d61ae1e5ec4c62686 490 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 13 486 8.3E-181 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 M892_07160 2a4b47acf6a3659d61ae1e5ec4c62686 490 PRINTS PR00934 X-His dipeptidase (M25) signature 163 181 1.2E-89 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 M892_07160 2a4b47acf6a3659d61ae1e5ec4c62686 490 PRINTS PR00934 X-His dipeptidase (M25) signature 210 227 1.2E-89 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 M892_07160 2a4b47acf6a3659d61ae1e5ec4c62686 490 PRINTS PR00934 X-His dipeptidase (M25) signature 255 274 1.2E-89 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 M892_07160 2a4b47acf6a3659d61ae1e5ec4c62686 490 PRINTS PR00934 X-His dipeptidase (M25) signature 105 123 1.2E-89 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 M892_07160 2a4b47acf6a3659d61ae1e5ec4c62686 490 PRINTS PR00934 X-His dipeptidase (M25) signature 84 103 1.2E-89 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 M892_07160 2a4b47acf6a3659d61ae1e5ec4c62686 490 PRINTS PR00934 X-His dipeptidase (M25) signature 454 476 1.2E-89 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 M892_07160 2a4b47acf6a3659d61ae1e5ec4c62686 490 PRINTS PR00934 X-His dipeptidase (M25) signature 139 156 1.2E-89 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 M892_07160 2a4b47acf6a3659d61ae1e5ec4c62686 490 PRINTS PR00934 X-His dipeptidase (M25) signature 367 385 1.2E-89 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 M892_07160 2a4b47acf6a3659d61ae1e5ec4c62686 490 PRINTS PR00934 X-His dipeptidase (M25) signature 432 448 1.2E-89 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 M892_07160 2a4b47acf6a3659d61ae1e5ec4c62686 490 PIRSF PIRSF016599 5 489 4.9E-216 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 M892_20160 273a98bf3ee4dded1687aee122f4bbeb 304 Gene3D G3DSA:1.20.1510.10 18 231 7.4E-33 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily M892_20160 273a98bf3ee4dded1687aee122f4bbeb 304 Pfam PF01545 Cation efflux family 23 231 1.2E-36 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 M892_20160 273a98bf3ee4dded1687aee122f4bbeb 304 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 18 303 1.2E-63 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 M892_20160 273a98bf3ee4dded1687aee122f4bbeb 304 SUPERFAMILY SSF161111 14 232 1.83E-51 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily M892_03590 d47ea941fc0712d37392a7942a288c4b 399 Pfam PF01609 Transposase DDE domain 92 327 4.8E-16 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_03590 d47ea941fc0712d37392a7942a288c4b 399 SUPERFAMILY SSF53098 1 382 1.74E-52 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_25430 30b78c02d689c785aa7f8398f3da2f57 150 Gene3D G3DSA:2.60.40.420 23 149 1.3E-44 T 12-10-2018 IPR008972 Cupredoxin M892_25430 30b78c02d689c785aa7f8398f3da2f57 150 ProDom PD003655 COPPER ELECTRON AZURIN METAL-BINDING PERIPLASMIC PRECURSOR SIGNAL SEQUENCING DIRECT MEMBRANE 27 149 2.0E-63 T 12-10-2018 M892_25430 30b78c02d689c785aa7f8398f3da2f57 150 SUPERFAMILY SSF49503 23 147 6.72E-45 T 12-10-2018 IPR008972 Cupredoxin M892_25430 30b78c02d689c785aa7f8398f3da2f57 150 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 23 147 8.0E-24 T 12-10-2018 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 M892_25430 30b78c02d689c785aa7f8398f3da2f57 150 TIGRFAM TIGR02695 azurin: azurin 25 149 9.1E-61 T 12-10-2018 IPR014068 Azurin M892_25430 30b78c02d689c785aa7f8398f3da2f57 150 ProSitePatterns PS00196 Type-1 copper (blue) proteins signature. 127 144 - T 12-10-2018 IPR028871 Blue (type 1) copper protein, binding site M892_07930 468460d13cc78db04f9f024501cd5eac 122 Gene3D G3DSA:2.40.10.220 1 120 1.9E-27 T 12-10-2018 M892_07930 468460d13cc78db04f9f024501cd5eac 122 Pfam PF07238 PilZ domain 3 100 3.3E-12 T 12-10-2018 IPR009875 PilZ domain GO:0035438 M892_07930 468460d13cc78db04f9f024501cd5eac 122 SUPERFAMILY SSF141371 1 120 3.73E-29 T 12-10-2018 M892_07930 468460d13cc78db04f9f024501cd5eac 122 PIRSF PIRSF028141 1 120 9.2E-35 T 12-10-2018 IPR027021 Cyclic di-GMP binding protein, PA4608 type M892_22320 c83be35b0290790ab785927729ca1938 108 SUPERFAMILY SSF48317 7 87 8.76E-22 T 12-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily M892_22320 c83be35b0290790ab785927729ca1938 108 Gene3D G3DSA:1.20.144.10 3 93 1.3E-17 T 12-10-2018 M892_22320 c83be35b0290790ab785927729ca1938 108 Pfam PF01569 PAP2 superfamily 12 87 5.2E-14 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase M892_12695 268e873b2167da4315a493d79a34b114 482 PIRSF PIRSF028153 1 482 8.7E-221 T 12-10-2018 IPR016871 MSHA biogenesis protein, MshI M892_12695 268e873b2167da4315a493d79a34b114 482 SUPERFAMILY SSF53067 45 154 9.84E-10 T 12-10-2018 M892_16045 15cd5049bbbd5d51da0560bfac01b358 198 Gene3D G3DSA:3.40.30.10 1 197 2.2E-53 T 12-10-2018 M892_16045 15cd5049bbbd5d51da0560bfac01b358 198 Pfam PF13743 Thioredoxin 1 164 1.7E-20 T 12-10-2018 M892_16045 15cd5049bbbd5d51da0560bfac01b358 198 SUPERFAMILY SSF52833 1 187 7.73E-30 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M892_23230 e6013179fa9205e755ee21daa9cd835b 271 Gene3D G3DSA:3.40.50.1820 14 247 2.4E-32 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_23230 e6013179fa9205e755ee21daa9cd835b 271 SUPERFAMILY SSF53474 18 256 1.94E-34 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_23230 e6013179fa9205e755ee21daa9cd835b 271 Pfam PF01764 Lipase (class 3) 69 213 1.7E-27 T 12-10-2018 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: R-HSA-426048 M892_22675 8e3f5d00e5ccbf3f60fdfcc04b60f8b3 551 Pfam PF09818 Predicted ATPase of the ABC class 1 438 2.4E-185 T 12-10-2018 IPR019195 ABC transporter, ATPase, putative M892_22675 8e3f5d00e5ccbf3f60fdfcc04b60f8b3 551 SUPERFAMILY SSF52540 227 410 5.31E-6 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_00460 4b892dbb64b6441c45d2dd40f8975215 595 Gene3D G3DSA:3.40.50.300 342 594 7.1E-65 T 12-10-2018 M892_00460 4b892dbb64b6441c45d2dd40f8975215 595 Gene3D G3DSA:1.20.1560.10 1 334 3.6E-51 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 M892_00460 4b892dbb64b6441c45d2dd40f8975215 595 SMART SM00382 375 594 5.2E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_00460 4b892dbb64b6441c45d2dd40f8975215 595 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 20 554 1.9E-177 T 12-10-2018 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 M892_00460 4b892dbb64b6441c45d2dd40f8975215 595 SUPERFAMILY SSF52540 350 580 2.19E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_00460 4b892dbb64b6441c45d2dd40f8975215 595 ProSitePatterns PS00211 ABC transporters family signature. 484 498 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_00460 4b892dbb64b6441c45d2dd40f8975215 595 SUPERFAMILY SSF90123 5 330 9.29E-57 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 M892_00460 4b892dbb64b6441c45d2dd40f8975215 595 Pfam PF00664 ABC transporter transmembrane region 25 292 3.5E-42 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 M892_00460 4b892dbb64b6441c45d2dd40f8975215 595 Pfam PF00005 ABC transporter 369 512 6.7E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_25375 7bd43e0c064921eb3946eda3f13ddf5b 410 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 145 153 - T 12-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 M892_25375 7bd43e0c064921eb3946eda3f13ddf5b 410 Gene3D G3DSA:2.60.120.10 26 296 2.4E-129 T 12-10-2018 IPR014710 RmlC-like jelly roll fold M892_25375 7bd43e0c064921eb3946eda3f13ddf5b 410 Gene3D G3DSA:1.10.441.10 169 321 2.4E-129 T 12-10-2018 M892_25375 7bd43e0c064921eb3946eda3f13ddf5b 410 PRINTS PR00714 Phosphomannose isomerase type I signature 24 42 5.0E-69 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 M892_25375 7bd43e0c064921eb3946eda3f13ddf5b 410 PRINTS PR00714 Phosphomannose isomerase type I signature 52 67 5.0E-69 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 M892_25375 7bd43e0c064921eb3946eda3f13ddf5b 410 PRINTS PR00714 Phosphomannose isomerase type I signature 295 314 5.0E-69 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 M892_25375 7bd43e0c064921eb3946eda3f13ddf5b 410 PRINTS PR00714 Phosphomannose isomerase type I signature 276 295 5.0E-69 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 M892_25375 7bd43e0c064921eb3946eda3f13ddf5b 410 PRINTS PR00714 Phosphomannose isomerase type I signature 257 276 5.0E-69 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 M892_25375 7bd43e0c064921eb3946eda3f13ddf5b 410 PRINTS PR00714 Phosphomannose isomerase type I signature 145 168 5.0E-69 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 M892_25375 7bd43e0c064921eb3946eda3f13ddf5b 410 PRINTS PR00714 Phosphomannose isomerase type I signature 241 256 5.0E-69 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 M892_25375 7bd43e0c064921eb3946eda3f13ddf5b 410 PRINTS PR00714 Phosphomannose isomerase type I signature 100 121 5.0E-69 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 M892_25375 7bd43e0c064921eb3946eda3f13ddf5b 410 PIRSF PIRSF001480 18 410 3.7E-102 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 M892_25375 7bd43e0c064921eb3946eda3f13ddf5b 410 Pfam PF01238 Phosphomannose isomerase type I 23 382 2.0E-87 T 12-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 M892_25375 7bd43e0c064921eb3946eda3f13ddf5b 410 SUPERFAMILY SSF51182 19 395 2.8E-104 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily M892_25375 7bd43e0c064921eb3946eda3f13ddf5b 410 ProSitePatterns PS00966 Phosphomannose isomerase type I signature 2. 276 301 - T 12-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 M892_25375 7bd43e0c064921eb3946eda3f13ddf5b 410 Gene3D G3DSA:2.60.120.10 322 403 2.4E-129 T 12-10-2018 IPR014710 RmlC-like jelly roll fold M892_25375 7bd43e0c064921eb3946eda3f13ddf5b 410 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 21 403 1.3E-88 T 12-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 M892_07995 4378c710d08cf715fbb07854bf2b578a 143 Gene3D G3DSA:2.40.10.330 72 128 4.2E-43 T 12-10-2018 M892_07995 4378c710d08cf715fbb07854bf2b578a 143 Gene3D G3DSA:3.10.50.40 13 140 4.2E-43 T 12-10-2018 M892_07995 4378c710d08cf715fbb07854bf2b578a 143 SUPERFAMILY SSF54534 4 142 3.34E-37 T 12-10-2018 M892_07995 4378c710d08cf715fbb07854bf2b578a 143 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 139 2.7E-13 T 12-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain M892_07300 3074ecdd4bd46bc8b8859b402f1c2d38 119 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 7 112 32.054 T 12-10-2018 IPR026592 Outer membrane protein assembly factor BamE M892_07300 3074ecdd4bd46bc8b8859b402f1c2d38 119 Gene3D G3DSA:3.30.1450.10 34 117 8.4E-26 T 12-10-2018 IPR037873 BamE-like M892_07300 3074ecdd4bd46bc8b8859b402f1c2d38 119 Pfam PF04355 SmpA / OmlA family 35 103 5.6E-26 T 12-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 M892_01790 13cec65ee541410cf83322433fb46bea 114 ProDom PD065768 ENTEROTOXIN ACE ACCESSORY TRANSMEMBRANE MEMBRANE TOXIN CHOLERA 27 113 0.002 T 12-10-2018 IPR020495 Accessory cholera enterotoxin, Ace M892_01790 13cec65ee541410cf83322433fb46bea 114 Pfam PF10734 Protein of unknown function (DUF2523) 41 110 3.9E-5 T 12-10-2018 IPR019670 Protein of unkown function DUF2523 M892_25840 27e6cfcd1b547ceb900144a45215d0b1 348 Gene3D G3DSA:3.30.70.270 204 348 1.2E-30 T 12-10-2018 M892_25840 27e6cfcd1b547ceb900144a45215d0b1 348 Pfam PF00990 Diguanylate cyclase, GGDEF domain 229 347 2.1E-25 T 12-10-2018 IPR000160 GGDEF domain M892_25840 27e6cfcd1b547ceb900144a45215d0b1 348 SUPERFAMILY SSF55073 214 347 3.22E-26 T 12-10-2018 IPR029787 Nucleotide cyclase M892_25840 27e6cfcd1b547ceb900144a45215d0b1 348 SMART SM00267 196 347 1.2E-14 T 12-10-2018 IPR000160 GGDEF domain M892_25840 27e6cfcd1b547ceb900144a45215d0b1 348 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 210 347 1.4E-26 T 12-10-2018 IPR000160 GGDEF domain M892_25840 27e6cfcd1b547ceb900144a45215d0b1 348 Pfam PF11845 Protein of unknown function (DUF3365) 22 168 2.1E-23 T 12-10-2018 IPR021796 Protein of unknown function DUF3365 M892_28610 65b2af28114947a0629cff1182509d4f 161 Pfam PF00583 Acetyltransferase (GNAT) family 48 142 4.4E-12 T 12-10-2018 IPR000182 GNAT domain M892_28610 65b2af28114947a0629cff1182509d4f 161 Gene3D G3DSA:3.40.630.30 1 154 4.7E-32 T 12-10-2018 M892_28610 65b2af28114947a0629cff1182509d4f 161 SUPERFAMILY SSF55729 5 147 5.23E-25 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_09710 08ff43e1b3faed8afa25c03d4fcb37a2 653 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 511 531 4.6E-7 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 M892_09710 08ff43e1b3faed8afa25c03d4fcb37a2 653 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 568 583 4.6E-7 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 M892_09710 08ff43e1b3faed8afa25c03d4fcb37a2 653 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 453 477 4.6E-7 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 M892_09710 08ff43e1b3faed8afa25c03d4fcb37a2 653 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 481 500 4.6E-7 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 M892_09710 08ff43e1b3faed8afa25c03d4fcb37a2 653 SUPERFAMILY SSF82171 27 396 2.49E-20 T 12-10-2018 M892_09710 08ff43e1b3faed8afa25c03d4fcb37a2 653 Pfam PF00326 Prolyl oligopeptidase family 442 652 4.5E-48 T 12-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 M892_09710 08ff43e1b3faed8afa25c03d4fcb37a2 653 Gene3D G3DSA:3.40.50.1820 377 653 7.7E-69 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_09710 08ff43e1b3faed8afa25c03d4fcb37a2 653 SUPERFAMILY SSF53474 396 652 1.83E-68 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_14580 8a63495fbb828f4878f0ece3a5ee32c6 324 Gene3D G3DSA:1.50.10.150 5 318 3.7E-44 T 12-10-2018 IPR038665 Voltage-dependent anion channel superfamily M892_14580 8a63495fbb828f4878f0ece3a5ee32c6 324 Pfam PF03595 Voltage-dependent anion channel 19 306 5.5E-31 T 12-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 M892_12930 ee0abacca027f34f8bd79b1ad4860f46 84 SUPERFAMILY SSF82657 4 82 2.88E-28 T 12-10-2018 IPR036065 BolA-like superfamily M892_12930 ee0abacca027f34f8bd79b1ad4860f46 84 Pfam PF01722 BolA-like protein 18 74 2.2E-14 T 12-10-2018 IPR002634 BolA protein M892_12930 ee0abacca027f34f8bd79b1ad4860f46 84 PIRSF PIRSF003113 2 83 2.0E-22 T 12-10-2018 IPR002634 BolA protein M892_12930 ee0abacca027f34f8bd79b1ad4860f46 84 Gene3D G3DSA:3.30.300.90 1 84 5.7E-33 T 12-10-2018 M892_20140 b1e203b58f4c08efb4f9a56e2f438f21 152 Pfam PF01475 Ferric uptake regulator family 19 141 1.3E-11 T 12-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 M892_20140 b1e203b58f4c08efb4f9a56e2f438f21 152 Gene3D G3DSA:3.30.1490.190 90 152 9.8E-13 T 12-10-2018 M892_20140 b1e203b58f4c08efb4f9a56e2f438f21 152 SUPERFAMILY SSF46785 15 147 3.81E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_20140 b1e203b58f4c08efb4f9a56e2f438f21 152 Gene3D G3DSA:1.10.10.10 2 88 3.1E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_17105 a9891279312acef3297d54d97809815a 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 200 3.4E-70 T 12-10-2018 IPR006070 YrdC-like domain GO:0003725 M892_17105 a9891279312acef3297d54d97809815a 206 Pfam PF01300 Telomere recombination 23 198 5.0E-45 T 12-10-2018 IPR006070 YrdC-like domain GO:0003725 M892_17105 a9891279312acef3297d54d97809815a 206 SUPERFAMILY SSF55821 1 203 1.28E-63 T 12-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily M892_17105 a9891279312acef3297d54d97809815a 206 Gene3D G3DSA:3.90.870.10 1 205 1.2E-67 T 12-10-2018 M892_13035 3d890d944efbe4584f8189bcee074d62 221 SUPERFAMILY SSF51735 1 184 1.03E-37 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_13035 3d890d944efbe4584f8189bcee074d62 221 Pfam PF00106 short chain dehydrogenase 1 182 3.4E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_13035 3d890d944efbe4584f8189bcee074d62 221 Gene3D G3DSA:3.40.50.720 1 221 2.7E-47 T 12-10-2018 M892_13035 3d890d944efbe4584f8189bcee074d62 221 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 179 1.2E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_13035 3d890d944efbe4584f8189bcee074d62 221 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 160 1.2E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_13035 3d890d944efbe4584f8189bcee074d62 221 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 1 17 1.2E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_25405 27f6819dec09fe581136c8acf043e29c 256 SUPERFAMILY SSF56784 37 250 4.69E-51 T 12-10-2018 IPR036412 HAD-like superfamily M892_25405 27f6819dec09fe581136c8acf043e29c 256 Gene3D G3DSA:3.40.50.1000 46 227 6.5E-51 T 12-10-2018 IPR023214 HAD superfamily M892_25405 27f6819dec09fe581136c8acf043e29c 256 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 44 55 3.4E-11 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M892_25405 27f6819dec09fe581136c8acf043e29c 256 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 187 207 3.4E-11 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M892_25405 27f6819dec09fe581136c8acf043e29c 256 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 169 185 3.4E-11 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M892_25405 27f6819dec09fe581136c8acf043e29c 256 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 138 151 3.4E-11 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M892_25405 27f6819dec09fe581136c8acf043e29c 256 Pfam PF13419 Haloacid dehalogenase-like hydrolase 48 223 7.8E-33 T 12-10-2018 M892_25405 27f6819dec09fe581136c8acf043e29c 256 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 120 223 5.8E-17 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M892_25405 27f6819dec09fe581136c8acf043e29c 256 Gene3D G3DSA:1.10.150.240 58 121 6.5E-51 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 M892_24045 096cda78ade03f62b9cbcf6816662fa4 374 Pfam PF16113 Enoyl-CoA hydratase/isomerase 19 358 2.1E-106 T 12-10-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 M892_24045 096cda78ade03f62b9cbcf6816662fa4 374 SUPERFAMILY SSF52096 18 344 6.16E-53 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily M892_24045 096cda78ade03f62b9cbcf6816662fa4 374 Gene3D G3DSA:3.90.226.10 5 374 1.8E-114 T 12-10-2018 M892_00735 86664eda9cfd54328b166b0f8715c4d8 403 SUPERFAMILY SSF109604 156 327 4.11E-32 T 12-10-2018 M892_00735 86664eda9cfd54328b166b0f8715c4d8 403 Pfam PF11871 Domain of unknown function (DUF3391) 9 133 1.1E-17 T 12-10-2018 IPR021812 Protein of unknown function DUF3391 M892_00735 86664eda9cfd54328b166b0f8715c4d8 403 Pfam PF01966 HD domain 166 290 1.7E-12 T 12-10-2018 IPR006674 HD domain M892_00735 86664eda9cfd54328b166b0f8715c4d8 403 Gene3D G3DSA:1.10.3210.10 11 328 3.5E-69 T 12-10-2018 M892_00735 86664eda9cfd54328b166b0f8715c4d8 403 SMART SM00471 161 297 7.3E-9 T 12-10-2018 IPR003607 HD/PDEase domain M892_20565 5a01cae02c4d5a5e0f493f406241490a 170 Pfam PF06912 Protein of unknown function (DUF1275) 6 155 1.0E-23 T 12-10-2018 IPR010699 Protein of unknown function DUF1275 M892_00340 861ba22858002f7672b90c37cd97a9cf 88 TIGRFAM TIGR02183 GRXA: glutaredoxin, GrxA family 2 85 2.0E-46 T 12-10-2018 IPR011902 Glutaredoxin, GrxA GO:0009055|GO:0015035|GO:0045454 M892_00340 861ba22858002f7672b90c37cd97a9cf 88 Pfam PF00462 Glutaredoxin 3 69 1.4E-15 T 12-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 M892_00340 861ba22858002f7672b90c37cd97a9cf 88 SUPERFAMILY SSF52833 3 81 7.42E-21 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M892_00340 861ba22858002f7672b90c37cd97a9cf 88 PRINTS PR00160 Glutaredoxin signature 66 79 2.8E-11 T 12-10-2018 IPR014025 Glutaredoxin subgroup M892_00340 861ba22858002f7672b90c37cd97a9cf 88 PRINTS PR00160 Glutaredoxin signature 3 21 2.8E-11 T 12-10-2018 IPR014025 Glutaredoxin subgroup M892_00340 861ba22858002f7672b90c37cd97a9cf 88 PRINTS PR00160 Glutaredoxin signature 52 65 2.8E-11 T 12-10-2018 IPR014025 Glutaredoxin subgroup M892_00340 861ba22858002f7672b90c37cd97a9cf 88 Gene3D G3DSA:3.40.30.10 1 84 7.5E-25 T 12-10-2018 M892_26425 5225aaf46336194f14160b4c9e552e4c 330 Gene3D G3DSA:3.30.1330.60 124 305 8.8E-41 T 12-10-2018 IPR036737 OmpA-like domain superfamily M892_26425 5225aaf46336194f14160b4c9e552e4c 330 Pfam PF00691 OmpA family 170 267 1.9E-11 T 12-10-2018 IPR006665 OmpA-like domain M892_26425 5225aaf46336194f14160b4c9e552e4c 330 SUPERFAMILY SSF103088 154 274 1.96E-19 T 12-10-2018 IPR036737 OmpA-like domain superfamily M892_26425 5225aaf46336194f14160b4c9e552e4c 330 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 11 62 1.5E-16 T 12-10-2018 IPR025713 Motility protein B, N-terminal domain M892_08780 832c3386844eba4c4a4557c6ddba9bfb 263 Pfam PF08239 Bacterial SH3 domain 132 183 2.9E-11 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type M892_08780 832c3386844eba4c4a4557c6ddba9bfb 263 Gene3D G3DSA:2.30.30.40 124 187 3.0E-9 T 12-10-2018 M892_16690 c63ea3c180990519ec62f76e12c3915d 426 Pfam PF04403 Paraquat-inducible protein A 32 191 4.0E-38 T 12-10-2018 IPR007498 Intermembrane transport protein PqiA-like M892_16690 c63ea3c180990519ec62f76e12c3915d 426 Pfam PF04403 Paraquat-inducible protein A 248 405 4.9E-54 T 12-10-2018 IPR007498 Intermembrane transport protein PqiA-like M892_16690 c63ea3c180990519ec62f76e12c3915d 426 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 2 405 2.1E-101 T 12-10-2018 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type M892_12390 c43d4255b394e2f205adb70d0f874684 300 Gene3D G3DSA:3.20.20.220 1 299 8.1E-111 T 12-10-2018 M892_12390 c43d4255b394e2f205adb70d0f874684 300 SUPERFAMILY SSF51730 22 294 3.92E-94 T 12-10-2018 IPR029041 FAD-linked oxidoreductase-like M892_12390 c43d4255b394e2f205adb70d0f874684 300 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 25 290 1.0E-101 T 12-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 M892_12390 c43d4255b394e2f205adb70d0f874684 300 Pfam PF02219 Methylenetetrahydrofolate reductase 17 291 4.8E-99 T 12-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 M892_20720 77cfaac0a7b945b5bf1961f1afa539bb 294 Pfam PF00510 Cytochrome c oxidase subunit III 8 293 2.2E-48 T 12-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_20720 77cfaac0a7b945b5bf1961f1afa539bb 294 Gene3D G3DSA:1.20.120.80 79 294 5.2E-62 T 12-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_20720 77cfaac0a7b945b5bf1961f1afa539bb 294 Gene3D G3DSA:1.10.287.70 1 78 1.2E-17 T 12-10-2018 M892_20720 77cfaac0a7b945b5bf1961f1afa539bb 294 SUPERFAMILY SSF81452 4 294 1.26E-77 T 12-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_10910 605cfa9fe2bd015173edc5b24ff867f4 257 SUPERFAMILY SSF69572 2 254 1.19E-70 T 12-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 M892_10910 605cfa9fe2bd015173edc5b24ff867f4 257 Pfam PF00899 ThiF family 10 251 6.3E-57 T 12-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 M892_10910 605cfa9fe2bd015173edc5b24ff867f4 257 Gene3D G3DSA:3.40.50.720 2 257 1.2E-81 T 12-10-2018 M892_22710 a86a44a079fe06f5567c35c9cf3e214d 312 SMART SM00797 27 309 6.9E-133 T 12-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B M892_22710 a86a44a079fe06f5567c35c9cf3e214d 312 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 10 293 1.5E-80 T 12-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B M892_22710 a86a44a079fe06f5567c35c9cf3e214d 312 Gene3D G3DSA:2.40.100.10 182 310 9.3E-41 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily M892_22710 a86a44a079fe06f5567c35c9cf3e214d 312 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 28 292 1.5E-84 T 12-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B M892_22710 a86a44a079fe06f5567c35c9cf3e214d 312 SUPERFAMILY SSF50891 187 296 8.34E-10 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily M892_00745 9f66fc419c9425e9735f37a2b09c9816 514 TIGRFAM TIGR04040 glycyl_YjjI: glycine radical enzyme, YjjI family 11 502 2.6E-231 T 12-10-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted M892_00745 9f66fc419c9425e9735f37a2b09c9816 514 SUPERFAMILY SSF51998 18 468 2.62E-99 T 12-10-2018 M892_00745 9f66fc419c9425e9735f37a2b09c9816 514 Pfam PF11230 Protein of unknown function (DUF3029) 21 502 1.7E-229 T 12-10-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted M892_00745 9f66fc419c9425e9735f37a2b09c9816 514 PIRSF PIRSF028991 5 514 3.3E-287 T 12-10-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted M892_07550 50bf89bfac1f111b0df944a2f9851617 292 SUPERFAMILY SSF55186 124 275 5.75E-14 T 12-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 M892_02975 4d37cc8920685b10819b0f6bfaabaa03 227 Gene3D G3DSA:3.40.1550.10 7 173 3.0E-20 T 12-10-2018 IPR028976 CheC-like superfamily M892_02975 4d37cc8920685b10819b0f6bfaabaa03 227 Pfam PF11813 Protein of unknown function (DUF3334) 3 227 8.9E-118 T 12-10-2018 IPR024513 Protein of unknown function DUF3334 M892_02975 4d37cc8920685b10819b0f6bfaabaa03 227 SUPERFAMILY SSF103039 10 173 7.98E-24 T 12-10-2018 IPR028976 CheC-like superfamily M892_06390 6f52ea2812bf0b9102bf6a368e25cbd0 290 SMART SM00862 30 107 3.8E-18 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M892_06390 6f52ea2812bf0b9102bf6a368e25cbd0 290 SUPERFAMILY SSF46894 11 107 2.21E-18 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M892_06390 6f52ea2812bf0b9102bf6a368e25cbd0 290 Pfam PF00486 Transcriptional regulatory protein, C terminal 31 107 1.3E-19 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M892_06390 6f52ea2812bf0b9102bf6a368e25cbd0 290 Gene3D G3DSA:1.10.10.10 6 110 4.9E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_04960 1c3496a8ec4b053696dca55f87a8b511 257 Gene3D G3DSA:2.40.400.10 24 254 4.6E-86 T 12-10-2018 IPR023375 Acetoacetate decarboxylase domain superfamily KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 M892_04960 1c3496a8ec4b053696dca55f87a8b511 257 Pfam PF06314 Acetoacetate decarboxylase (ADC) 20 253 2.0E-77 T 12-10-2018 IPR010451 Acetoacetate decarboxylase GO:0016829 KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 M892_04960 1c3496a8ec4b053696dca55f87a8b511 257 SUPERFAMILY SSF160104 12 254 1.83E-82 T 12-10-2018 IPR023375 Acetoacetate decarboxylase domain superfamily KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 M892_19085 af165c28ad94b9f1b47ef4d13c2120c5 268 SUPERFAMILY SSF56935 136 264 4.64E-5 T 12-10-2018 M892_26690 b772927f6c9ea5b242075dcba4b09856 321 Gene3D G3DSA:3.30.1330.60 203 318 7.0E-32 T 12-10-2018 IPR036737 OmpA-like domain superfamily M892_26690 b772927f6c9ea5b242075dcba4b09856 321 Gene3D G3DSA:2.40.160.20 13 200 2.1E-43 T 12-10-2018 M892_26690 b772927f6c9ea5b242075dcba4b09856 321 Pfam PF00691 OmpA family 214 303 4.4E-19 T 12-10-2018 IPR006665 OmpA-like domain M892_26690 b772927f6c9ea5b242075dcba4b09856 321 Pfam PF01389 OmpA-like transmembrane domain 23 180 1.3E-22 T 12-10-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 M892_26690 b772927f6c9ea5b242075dcba4b09856 321 PRINTS PR01021 OMPA domain signature 239 254 2.4E-7 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M892_26690 b772927f6c9ea5b242075dcba4b09856 321 PRINTS PR01021 OMPA domain signature 254 270 2.4E-7 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M892_26690 b772927f6c9ea5b242075dcba4b09856 321 SUPERFAMILY SSF103088 196 309 4.58E-30 T 12-10-2018 IPR036737 OmpA-like domain superfamily M892_26690 b772927f6c9ea5b242075dcba4b09856 321 SUPERFAMILY SSF56925 23 181 3.14E-35 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel M892_24940 aae5fe29eba4307bcf9e90b3bee99df2 313 SUPERFAMILY SSF46785 7 84 2.04E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_24940 aae5fe29eba4307bcf9e90b3bee99df2 313 Gene3D G3DSA:3.40.190.10 174 272 2.8E-20 T 12-10-2018 M892_24940 aae5fe29eba4307bcf9e90b3bee99df2 313 Gene3D G3DSA:1.10.10.10 1 90 7.0E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_24940 aae5fe29eba4307bcf9e90b3bee99df2 313 SUPERFAMILY SSF53850 92 303 9.41E-20 T 12-10-2018 M892_24940 aae5fe29eba4307bcf9e90b3bee99df2 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 2.1E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_24940 aae5fe29eba4307bcf9e90b3bee99df2 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 2.1E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_24940 aae5fe29eba4307bcf9e90b3bee99df2 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 2.1E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_24940 aae5fe29eba4307bcf9e90b3bee99df2 313 Gene3D G3DSA:3.40.190.10 93 298 2.8E-20 T 12-10-2018 M892_24940 aae5fe29eba4307bcf9e90b3bee99df2 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 7.0E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_24940 aae5fe29eba4307bcf9e90b3bee99df2 313 Pfam PF03466 LysR substrate binding domain 99 301 5.0E-13 T 12-10-2018 IPR005119 LysR, substrate-binding M892_00320 dfc3bbc452ad8f25e0276f50590b9bf7 208 SUPERFAMILY SSF46689 3 73 2.87E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_00320 dfc3bbc452ad8f25e0276f50590b9bf7 208 ProSitePatterns PS01081 TetR-type HTH domain signature. 23 54 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site M892_00320 dfc3bbc452ad8f25e0276f50590b9bf7 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 1.4E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M892_00320 dfc3bbc452ad8f25e0276f50590b9bf7 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 1.4E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M892_00320 dfc3bbc452ad8f25e0276f50590b9bf7 208 Gene3D G3DSA:1.10.357.10 2 208 1.2E-54 T 12-10-2018 M892_00320 dfc3bbc452ad8f25e0276f50590b9bf7 208 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 57 1.1E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M892_00320 dfc3bbc452ad8f25e0276f50590b9bf7 208 SUPERFAMILY SSF48498 80 207 1.49E-41 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily M892_11620 b06e4df6a66aa31cddbca9c51c856fc9 448 PIRSF PIRSF006060 1 446 4.2E-50 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 M892_11620 b06e4df6a66aa31cddbca9c51c856fc9 448 Gene3D G3DSA:1.20.1740.10 1 443 4.4E-58 T 12-10-2018 M892_11620 b06e4df6a66aa31cddbca9c51c856fc9 448 Pfam PF13520 Amino acid permease 8 421 1.0E-37 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 M892_22285 577d230789ee38be0ff735d9ec3097ec 202 ProSitePatterns PS00622 LuxR-type HTH domain signature. 152 179 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_22285 577d230789ee38be0ff735d9ec3097ec 202 SUPERFAMILY SSF46894 133 190 2.58E-15 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M892_22285 577d230789ee38be0ff735d9ec3097ec 202 Pfam PF00196 Bacterial regulatory proteins, luxR family 137 190 2.8E-16 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_22285 577d230789ee38be0ff735d9ec3097ec 202 SUPERFAMILY SSF52172 2 127 2.13E-22 T 12-10-2018 IPR011006 CheY-like superfamily M892_22285 577d230789ee38be0ff735d9ec3097ec 202 SMART SM00448 2 115 2.4E-16 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_22285 577d230789ee38be0ff735d9ec3097ec 202 Gene3D G3DSA:1.10.10.10 127 195 1.3E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_22285 577d230789ee38be0ff735d9ec3097ec 202 Gene3D G3DSA:3.40.50.2300 1 126 3.5E-21 T 12-10-2018 M892_22285 577d230789ee38be0ff735d9ec3097ec 202 Pfam PF00072 Response regulator receiver domain 4 115 9.4E-21 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_22285 577d230789ee38be0ff735d9ec3097ec 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 180 2.1E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_22285 577d230789ee38be0ff735d9ec3097ec 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 138 152 2.1E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_22285 577d230789ee38be0ff735d9ec3097ec 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 168 2.1E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_22285 577d230789ee38be0ff735d9ec3097ec 202 SMART SM00421 135 192 1.2E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_00345 fcfd967dba41497cee2650666f993b00 284 Gene3D G3DSA:3.40.50.10490 94 276 6.3E-39 T 12-10-2018 M892_00345 fcfd967dba41497cee2650666f993b00 284 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 1.7E-29 T 12-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 M892_00345 fcfd967dba41497cee2650666f993b00 284 Pfam PF01380 SIS domain 124 252 7.0E-25 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 M892_00345 fcfd967dba41497cee2650666f993b00 284 SUPERFAMILY SSF53697 93 278 2.02E-39 T 12-10-2018 M892_00345 fcfd967dba41497cee2650666f993b00 284 SUPERFAMILY SSF46689 1 80 1.58E-21 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_00345 fcfd967dba41497cee2650666f993b00 284 Gene3D G3DSA:1.10.10.10 1 79 2.3E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_24435 ec96ac9d25cbb561d5ea037046e19717 137 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 21 37 - T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 M892_24435 ec96ac9d25cbb561d5ea037046e19717 137 Pfam PF00472 RF-1 domain 7 132 1.2E-23 T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 M892_24435 ec96ac9d25cbb561d5ea037046e19717 137 Gene3D G3DSA:3.30.160.20 1 136 3.0E-38 T 12-10-2018 M892_24435 ec96ac9d25cbb561d5ea037046e19717 137 SUPERFAMILY SSF75620 7 117 4.32E-12 T 12-10-2018 M892_06775 0f5f13f8f9be088d3af706a40feee23d 290 SUPERFAMILY SSF55060 162 277 1.1E-35 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily M892_06775 0f5f13f8f9be088d3af706a40feee23d 290 Pfam PF00288 GHMP kinases N terminal domain 88 145 1.2E-7 T 12-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 M892_06775 0f5f13f8f9be088d3af706a40feee23d 290 SUPERFAMILY SSF54211 6 158 9.87E-44 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold M892_06775 0f5f13f8f9be088d3af706a40feee23d 290 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 6 267 31.079 T 12-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 M892_06775 0f5f13f8f9be088d3af706a40feee23d 290 Gene3D G3DSA:3.30.70.890 162 280 3.7E-29 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily M892_06775 0f5f13f8f9be088d3af706a40feee23d 290 PIRSF PIRSF010376 4 280 3.1E-86 T 12-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 M892_06775 0f5f13f8f9be088d3af706a40feee23d 290 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 5 279 5.8E-94 T 12-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 M892_06775 0f5f13f8f9be088d3af706a40feee23d 290 Pfam PF08544 GHMP kinases C terminal 204 260 1.5E-6 T 12-10-2018 IPR013750 GHMP kinase, C-terminal domain M892_06775 0f5f13f8f9be088d3af706a40feee23d 290 Gene3D G3DSA:3.30.230.10 2 160 4.0E-53 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M892_27370 92c0eba613f30244dddfb300fddeb457 242 ProDom PD115044 PRECURSOR SIGNAL 3'REGION PLASMID CS5 25 212 1.0E-21 T 12-10-2018 M892_21885 92c0eba613f30244dddfb300fddeb457 242 ProDom PD115044 PRECURSOR SIGNAL 3'REGION PLASMID CS5 25 212 1.0E-21 T 12-10-2018 M892_08430 109983e282333f4b4a3e2c0bd0ab7697 603 Gene3D G3DSA:1.25.40.650 149 254 6.3E-18 T 12-10-2018 M892_08430 109983e282333f4b4a3e2c0bd0ab7697 603 Gene3D G3DSA:3.40.50.2300 369 597 4.6E-62 T 12-10-2018 M892_08430 109983e282333f4b4a3e2c0bd0ab7697 603 Gene3D G3DSA:1.25.40.10 23 146 6.3E-11 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_08430 109983e282333f4b4a3e2c0bd0ab7697 603 Gene3D G3DSA:3.40.50.2300 261 596 4.6E-62 T 12-10-2018 M892_08430 109983e282333f4b4a3e2c0bd0ab7697 603 Pfam PF04348 LppC putative lipoprotein 40 599 4.8E-164 T 12-10-2018 IPR007443 Penicillin-binding protein activator LpoA M892_08430 109983e282333f4b4a3e2c0bd0ab7697 603 SUPERFAMILY SSF53822 260 599 1.51E-70 T 12-10-2018 IPR028082 Periplasmic binding protein-like I M892_08430 109983e282333f4b4a3e2c0bd0ab7697 603 Hamap MF_01890 Penicillin-binding protein activator LpoA [lpoA]. 1 603 29.691 T 12-10-2018 IPR007443 Penicillin-binding protein activator LpoA M892_06030 08c7576a34d66e009a0087fe54d5acb2 246 SUPERFAMILY SSF56214 129 244 5.89E-13 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 M892_06030 08c7576a34d66e009a0087fe54d5acb2 246 PRINTS PR01399 Enterobactin synthetase component D signature 61 81 1.5E-8 T 12-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 M892_06030 08c7576a34d66e009a0087fe54d5acb2 246 PRINTS PR01399 Enterobactin synthetase component D signature 168 184 1.5E-8 T 12-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 M892_06030 08c7576a34d66e009a0087fe54d5acb2 246 Gene3D G3DSA:3.90.470.20 38 147 7.3E-7 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 M892_06030 08c7576a34d66e009a0087fe54d5acb2 246 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 130 213 1.2E-10 T 12-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 M892_26945 1a4659456fa6e7ea3342fa3993476ff9 401 Pfam PF08238 Sel1 repeat 212 242 1.7E-5 T 12-10-2018 IPR006597 Sel1-like repeat M892_26945 1a4659456fa6e7ea3342fa3993476ff9 401 Pfam PF08238 Sel1 repeat 136 169 0.55 T 12-10-2018 IPR006597 Sel1-like repeat M892_26945 1a4659456fa6e7ea3342fa3993476ff9 401 Pfam PF08238 Sel1 repeat 182 206 14.0 T 12-10-2018 IPR006597 Sel1-like repeat M892_26945 1a4659456fa6e7ea3342fa3993476ff9 401 Pfam PF08238 Sel1 repeat 79 97 0.057 T 12-10-2018 IPR006597 Sel1-like repeat M892_26945 1a4659456fa6e7ea3342fa3993476ff9 401 Gene3D G3DSA:1.25.40.10 25 181 1.5E-13 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_26945 1a4659456fa6e7ea3342fa3993476ff9 401 SMART SM00671 243 276 260.0 T 12-10-2018 IPR006597 Sel1-like repeat M892_26945 1a4659456fa6e7ea3342fa3993476ff9 401 SMART SM00671 207 242 1.1E-4 T 12-10-2018 IPR006597 Sel1-like repeat M892_26945 1a4659456fa6e7ea3342fa3993476ff9 401 SMART SM00671 135 170 1.5 T 12-10-2018 IPR006597 Sel1-like repeat M892_26945 1a4659456fa6e7ea3342fa3993476ff9 401 SMART SM00671 67 97 140.0 T 12-10-2018 IPR006597 Sel1-like repeat M892_26945 1a4659456fa6e7ea3342fa3993476ff9 401 SMART SM00671 171 206 23.0 T 12-10-2018 IPR006597 Sel1-like repeat M892_26945 1a4659456fa6e7ea3342fa3993476ff9 401 Gene3D G3DSA:1.25.40.10 182 282 8.7E-17 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_26945 1a4659456fa6e7ea3342fa3993476ff9 401 SUPERFAMILY SSF81901 71 280 9.16E-29 T 12-10-2018 M892_11200 19c1d1c878fc51d9515916dfd67b1cab 407 Pfam PF08668 HDOD domain 208 324 1.2E-11 T 12-10-2018 IPR013976 Metal-dependent hydrolase HDOD M892_11200 19c1d1c878fc51d9515916dfd67b1cab 407 SUPERFAMILY SSF109604 185 403 5.02E-39 T 12-10-2018 M892_11200 19c1d1c878fc51d9515916dfd67b1cab 407 Gene3D G3DSA:3.20.20.450 45 204 1.8E-16 T 12-10-2018 IPR035919 EAL domain superfamily M892_11200 19c1d1c878fc51d9515916dfd67b1cab 407 SUPERFAMILY SSF141868 4 197 9.55E-26 T 12-10-2018 IPR035919 EAL domain superfamily M892_11200 19c1d1c878fc51d9515916dfd67b1cab 407 Pfam PF00563 EAL domain 74 194 3.2E-13 T 12-10-2018 IPR001633 EAL domain M892_11200 19c1d1c878fc51d9515916dfd67b1cab 407 Gene3D G3DSA:1.10.3210.10 205 368 1.0E-20 T 12-10-2018 M892_11200 19c1d1c878fc51d9515916dfd67b1cab 407 PIRSF PIRSF003180 1 407 1.5E-170 T 12-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing M892_14750 5523b1cb242426f28755ee075127eee1 334 PIRSF PIRSF006268 1 334 2.9E-93 T 12-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 M892_14750 5523b1cb242426f28755ee075127eee1 334 SUPERFAMILY SSF143631 24 332 1.39E-100 T 12-10-2018 IPR003374 ApbE-like superfamily M892_14750 5523b1cb242426f28755ee075127eee1 334 Gene3D G3DSA:3.10.520.20 16 334 2.8E-112 T 12-10-2018 M892_14750 5523b1cb242426f28755ee075127eee1 334 Pfam PF02424 ApbE family 31 310 1.4E-85 T 12-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 M892_07415 b196d1468e77125ec95d31ceedd23714 513 Pfam PF13817 IS66 C-terminal element 473 509 7.6E-8 T 12-10-2018 IPR039552 Transposase IS66, C-terminal M892_07415 b196d1468e77125ec95d31ceedd23714 513 Pfam PF03050 Transposase IS66 family 183 466 3.7E-101 T 12-10-2018 IPR004291 Transposase, IS66 M892_07415 b196d1468e77125ec95d31ceedd23714 513 Pfam PF13007 Transposase C of IS166 homeodomain 38 111 3.8E-14 T 12-10-2018 IPR024463 Transposase TnpC, homeodomain M892_07415 b196d1468e77125ec95d31ceedd23714 513 Pfam PF13005 zinc-finger binding domain of transposase IS66 119 163 1.5E-16 T 12-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 M892_26835 a7e87979675dfd232d52c1e4d27fb35d 686 SUPERFAMILY SSF51445 148 655 3.43E-93 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily M892_26835 a7e87979675dfd232d52c1e4d27fb35d 686 SMART SM00642 203 646 3.6E-92 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 M892_26835 a7e87979675dfd232d52c1e4d27fb35d 686 Pfam PF00128 Alpha amylase, catalytic domain 236 606 2.3E-51 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 M892_26835 a7e87979675dfd232d52c1e4d27fb35d 686 PIRSF PIRSF036917 1 685 0.0 T 12-10-2018 IPR014635 Alpha-amylase, MalS type GO:0004556|GO:0005509|GO:0030980|GO:0042597|GO:0051692 KEGG: 00500+3.2.1.1 M892_26835 a7e87979675dfd232d52c1e4d27fb35d 686 Gene3D G3DSA:3.20.20.80 431 653 9.2E-38 T 12-10-2018 M892_26835 a7e87979675dfd232d52c1e4d27fb35d 686 Gene3D G3DSA:3.20.20.80 186 428 7.7E-57 T 12-10-2018 M892_02360 f197b4fe413abccd50a77e7d826174d1 460 SUPERFAMILY SSF50182 225 292 1.05E-11 T 12-10-2018 IPR010920 LSM domain superfamily M892_02360 f197b4fe413abccd50a77e7d826174d1 460 Pfam PF00924 Mechanosensitive ion channel 183 434 9.3E-42 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 M892_02360 f197b4fe413abccd50a77e7d826174d1 460 Gene3D G3DSA:2.30.30.60 242 288 1.3E-6 T 12-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily M892_09310 3e022f410d3b8a3ea0f9cc1f922bcf0f 287 Pfam PF05990 Alpha/beta hydrolase of unknown function (DUF900) 43 271 3.1E-24 T 12-10-2018 IPR010297 Protein of unknown function DUF900, hydrolase-like M892_09310 3e022f410d3b8a3ea0f9cc1f922bcf0f 287 SUPERFAMILY SSF53474 47 164 6.93E-5 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_01105 876ed9d117aa271695c09b9f73893799 120 PIRSF PIRSF039020 1 120 9.3E-37 T 12-10-2018 IPR026275 Glyoxalase/dioxygenase/EhpR M892_01105 876ed9d117aa271695c09b9f73893799 120 Gene3D G3DSA:3.10.180.10 1 120 3.2E-37 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M892_01105 876ed9d117aa271695c09b9f73893799 120 SUPERFAMILY SSF54593 4 120 9.9E-19 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M892_21660 1f43a17565e6ce01598873c975d98ac8 160 Gene3D G3DSA:1.25.40.10 49 154 1.3E-22 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_21660 1f43a17565e6ce01598873c975d98ac8 160 SUPERFAMILY SSF48452 5 125 2.36E-17 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_21660 1f43a17565e6ce01598873c975d98ac8 160 Pfam PF12688 Tetratrico peptide repeat 39 156 7.9E-13 T 12-10-2018 M892_21660 1f43a17565e6ce01598873c975d98ac8 160 SMART SM00028 72 105 8.7E-4 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_21660 1f43a17565e6ce01598873c975d98ac8 160 SMART SM00028 35 69 180.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M892_10400 0e0943ffd722f1a29606eb7e1ef5a4f3 304 SUPERFAMILY SSF46785 5 119 6.99E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_10400 0e0943ffd722f1a29606eb7e1ef5a4f3 304 Gene3D G3DSA:1.10.10.10 9 98 2.7E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_10400 0e0943ffd722f1a29606eb7e1ef5a4f3 304 SUPERFAMILY SSF53850 95 299 1.21E-29 T 12-10-2018 M892_10400 0e0943ffd722f1a29606eb7e1ef5a4f3 304 Gene3D G3DSA:3.40.190.10 173 273 8.1E-27 T 12-10-2018 M892_10400 0e0943ffd722f1a29606eb7e1ef5a4f3 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 69 1.2E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_10400 0e0943ffd722f1a29606eb7e1ef5a4f3 304 Gene3D G3DSA:3.40.190.10 99 295 8.1E-27 T 12-10-2018 M892_10400 0e0943ffd722f1a29606eb7e1ef5a4f3 304 Pfam PF03466 LysR substrate binding domain 95 297 4.3E-33 T 12-10-2018 IPR005119 LysR, substrate-binding M892_19850 2b4e876b6c18c6aaf3ac212317e19750 236 Gene3D G3DSA:3.30.420.10 25 196 2.7E-10 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M892_19850 2b4e876b6c18c6aaf3ac212317e19750 236 SUPERFAMILY SSF53098 28 198 1.52E-36 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_19850 2b4e876b6c18c6aaf3ac212317e19750 236 Pfam PF00665 Integrase core domain 28 144 8.5E-19 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 M892_00540 1fab2582847eec8bfaf044b5721ebf92 143 SUPERFAMILY SSF81301 9 140 2.29E-30 T 12-10-2018 M892_00540 1fab2582847eec8bfaf044b5721ebf92 143 Gene3D G3DSA:3.30.460.10 3 142 2.6E-30 T 12-10-2018 M892_00540 1fab2582847eec8bfaf044b5721ebf92 143 Pfam PF04229 GrpB protein 9 139 2.6E-30 T 12-10-2018 IPR007344 GrpB/Dephospho-CoA kinase M892_28445 4073a08024f11109f3ad9e0d430ae35c 579 Gene3D G3DSA:3.40.50.300 329 558 2.8E-37 T 12-10-2018 M892_28445 4073a08024f11109f3ad9e0d430ae35c 579 SUPERFAMILY SSF52540 104 565 2.28E-37 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_28445 4073a08024f11109f3ad9e0d430ae35c 579 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 116 563 2.2E-92 T 12-10-2018 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 M892_00740 8e81b806ccd585734016de134660f8a6 80 Pfam PF01810 LysE type translocator 1 75 2.2E-6 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 M892_13710 8ea342de3f283178ea748c9ce4aa73be 341 Pfam PF01548 Transposase 8 141 1.5E-14 T 12-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 M892_13710 8ea342de3f283178ea748c9ce4aa73be 341 Pfam PF02371 Transposase IS116/IS110/IS902 family 212 289 2.1E-15 T 12-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 M892_01995 bcb9188e6836999a7c824ac0938b331b 207 Pfam PF11748 Protein of unknown function (DUF3306) 4 122 1.5E-25 T 12-10-2018 IPR021735 Protein of unknown function DUF3306 M892_24020 467642a5d88ca125e0eb9a7bf8d6dd79 199 Gene3D G3DSA:1.20.120.80 14 199 4.0E-57 T 12-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_24020 467642a5d88ca125e0eb9a7bf8d6dd79 199 SUPERFAMILY SSF81452 7 197 8.37E-58 T 12-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_24020 467642a5d88ca125e0eb9a7bf8d6dd79 199 Pfam PF00510 Cytochrome c oxidase subunit III 21 197 3.8E-18 T 12-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_24020 467642a5d88ca125e0eb9a7bf8d6dd79 199 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 20 199 9.4E-84 T 12-10-2018 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 M892_25560 3c5ea01a3a2f8f5fe227389aa83a03e8 249 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 4 249 3.1E-126 T 12-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 M892_25560 3c5ea01a3a2f8f5fe227389aa83a03e8 249 SUPERFAMILY SSF52540 5 235 4.17E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_25560 3c5ea01a3a2f8f5fe227389aa83a03e8 249 Pfam PF00005 ABC transporter 19 174 9.8E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_25560 3c5ea01a3a2f8f5fe227389aa83a03e8 249 SMART SM00382 28 220 1.5E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_25560 3c5ea01a3a2f8f5fe227389aa83a03e8 249 Gene3D G3DSA:3.40.50.300 4 246 3.0E-62 T 12-10-2018 M892_25560 3c5ea01a3a2f8f5fe227389aa83a03e8 249 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_07450 6b5893b6b5b6b9f5594dcf6f2a991512 123 SUPERFAMILY SSF53383 7 118 1.41E-34 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M892_07450 6b5893b6b5b6b9f5594dcf6f2a991512 123 Gene3D G3DSA:3.90.1150.10 14 47 9.2E-38 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M892_07450 6b5893b6b5b6b9f5594dcf6f2a991512 123 Gene3D G3DSA:3.40.640.10 48 123 9.2E-38 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M892_07450 6b5893b6b5b6b9f5594dcf6f2a991512 123 Pfam PF00202 Aminotransferase class-III 14 122 3.6E-27 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 M892_15735 686642406a94a3b98e9f2e3c12bb61b1 98 Pfam PF13467 Ribbon-helix-helix domain 16 82 6.8E-24 T 12-10-2018 IPR027373 Ribbon-helix-helix domain M892_15735 686642406a94a3b98e9f2e3c12bb61b1 98 Gene3D G3DSA:1.10.3990.20 8 97 3.6E-32 T 12-10-2018 IPR038268 Ribbon-helix-helix domain superfamily M892_15540 da7acb61112921fea1ba64f823a8e7b7 1482 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 1437 1478 3.9E-14 T 12-10-2018 IPR020011 Motility protein FimV, C-terminal M892_15540 da7acb61112921fea1ba64f823a8e7b7 1482 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 72 144 1.4E-25 T 12-10-2018 IPR020012 Motility protein FimV, N-terminal M892_15540 da7acb61112921fea1ba64f823a8e7b7 1482 Gene3D G3DSA:1.20.58.2200 1421 1479 7.3E-13 T 12-10-2018 IPR038440 FimV, C-terminal domain superfamily M892_22945 b3f2d6903d3c00fe94a8149db3a1b06a 375 Pfam PF13006 Insertion element 4 transposase N-terminal 2 41 4.1E-5 T 12-10-2018 IPR024473 Transposase, IS4, N-terminal M892_22945 b3f2d6903d3c00fe94a8149db3a1b06a 375 SUPERFAMILY SSF53098 42 296 4.02E-24 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_22945 b3f2d6903d3c00fe94a8149db3a1b06a 375 Pfam PF01609 Transposase DDE domain 62 285 4.7E-24 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_08285 83104ec29a2624e239e3d292a9ef3055 231 Gene3D G3DSA:3.40.50.1580 1 231 5.0E-72 T 12-10-2018 M892_08285 83104ec29a2624e239e3d292a9ef3055 231 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 230 47.973 T 12-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 M892_08285 83104ec29a2624e239e3d292a9ef3055 231 SUPERFAMILY SSF53167 1 228 8.25E-74 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 M892_08285 83104ec29a2624e239e3d292a9ef3055 231 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 227 1.4E-102 T 12-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 M892_08285 83104ec29a2624e239e3d292a9ef3055 231 Pfam PF01048 Phosphorylase superfamily 2 227 2.1E-49 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 M892_17090 2fd5d0acf1ae8c9ae60ed52ee74dde7c 521 Gene3D G3DSA:3.60.120.10 7 521 5.2E-186 T 12-10-2018 IPR005801 ADC synthase GO:0009058 M892_17090 2fd5d0acf1ae8c9ae60ed52ee74dde7c 521 Pfam PF04715 Anthranilate synthase component I, N terminal region 24 197 3.4E-14 T 12-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 M892_17090 2fd5d0acf1ae8c9ae60ed52ee74dde7c 521 PIRSF PIRSF001373 3 521 2.2E-260 T 12-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 M892_17090 2fd5d0acf1ae8c9ae60ed52ee74dde7c 521 SUPERFAMILY SSF56322 13 517 8.37E-158 T 12-10-2018 IPR005801 ADC synthase GO:0009058 M892_17090 2fd5d0acf1ae8c9ae60ed52ee74dde7c 521 Pfam PF00425 chorismate binding enzyme 247 506 4.5E-84 T 12-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal M892_17090 2fd5d0acf1ae8c9ae60ed52ee74dde7c 521 PRINTS PR00095 Anthranilate synthase component I signature 448 462 1.3E-22 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 M892_17090 2fd5d0acf1ae8c9ae60ed52ee74dde7c 521 PRINTS PR00095 Anthranilate synthase component I signature 354 367 1.3E-22 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 M892_17090 2fd5d0acf1ae8c9ae60ed52ee74dde7c 521 PRINTS PR00095 Anthranilate synthase component I signature 463 477 1.3E-22 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 M892_17090 2fd5d0acf1ae8c9ae60ed52ee74dde7c 521 PRINTS PR00095 Anthranilate synthase component I signature 368 381 1.3E-22 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 M892_17090 2fd5d0acf1ae8c9ae60ed52ee74dde7c 521 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 22 518 1.3E-227 T 12-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 M892_14280 f6c08d87e293c3461171aac1c04c62bf 563 SUPERFAMILY SSF56801 18 547 9.94E-112 T 12-10-2018 M892_14280 f6c08d87e293c3461171aac1c04c62bf 563 ProSitePatterns PS00455 Putative AMP-binding domain signature. 182 193 - T 12-10-2018 IPR020845 AMP-binding, conserved site M892_14280 f6c08d87e293c3461171aac1c04c62bf 563 Pfam PF00501 AMP-binding enzyme 23 440 2.2E-90 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 M892_14280 f6c08d87e293c3461171aac1c04c62bf 563 Gene3D G3DSA:3.40.50.12780 15 436 6.4E-86 T 12-10-2018 M892_13370 d68e0539a520c6e00bc0b3c48347e991 157 Pfam PF04073 Aminoacyl-tRNA editing domain 27 146 8.3E-31 T 12-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 M892_13370 d68e0539a520c6e00bc0b3c48347e991 157 SUPERFAMILY SSF55826 5 156 6.67E-39 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 M892_13370 d68e0539a520c6e00bc0b3c48347e991 157 Gene3D G3DSA:3.90.960.10 2 157 4.1E-42 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 M892_28325 4d4b0b5637a20173d5e3609425cc67f2 75 SUPERFAMILY SSF53098 21 69 5.31E-7 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_01080 737023219f66e4e86a4c34dde9e1e09d 250 SMART SM00862 15 90 9.2E-8 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M892_01080 737023219f66e4e86a4c34dde9e1e09d 250 Pfam PF00486 Transcriptional regulatory protein, C terminal 17 90 2.2E-11 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M892_01080 737023219f66e4e86a4c34dde9e1e09d 250 Gene3D G3DSA:1.10.10.10 3 99 3.1E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_01080 737023219f66e4e86a4c34dde9e1e09d 250 SUPERFAMILY SSF46894 4 91 3.12E-13 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M892_07755 2643fa397e1f378355625d70f21a0d3a 696 Gene3D G3DSA:3.30.1840.10 110 307 1.2E-74 T 12-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 M892_07755 2643fa397e1f378355625d70f21a0d3a 696 SUPERFAMILY SSF140356 4 104 5.49E-32 T 12-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 M892_07755 2643fa397e1f378355625d70f21a0d3a 696 Gene3D G3DSA:3.30.870.10 500 686 8.8E-74 T 12-10-2018 M892_07755 2643fa397e1f378355625d70f21a0d3a 696 Pfam PF13089 Polyphosphate kinase N-terminal domain 7 109 4.8E-31 T 12-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 M892_07755 2643fa397e1f378355625d70f21a0d3a 696 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 7 677 2.1E-263 T 12-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 M892_07755 2643fa397e1f378355625d70f21a0d3a 696 Pfam PF13090 Polyphosphate kinase C-terminal domain 331 676 1.1E-144 T 12-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 M892_07755 2643fa397e1f378355625d70f21a0d3a 696 Gene3D G3DSA:1.20.58.310 9 109 3.5E-36 T 12-10-2018 M892_07755 2643fa397e1f378355625d70f21a0d3a 696 Gene3D G3DSA:3.30.870.10 319 499 7.8E-72 T 12-10-2018 M892_07755 2643fa397e1f378355625d70f21a0d3a 696 Pfam PF02503 Polyphosphate kinase middle domain 119 320 1.3E-46 T 12-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 M892_07755 2643fa397e1f378355625d70f21a0d3a 696 SUPERFAMILY SSF143724 107 313 2.16E-63 T 12-10-2018 M892_07755 2643fa397e1f378355625d70f21a0d3a 696 Hamap MF_00347 Polyphosphate kinase [ppk]. 4 681 27.435 T 12-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 M892_07755 2643fa397e1f378355625d70f21a0d3a 696 SUPERFAMILY SSF56024 500 684 8.3E-70 T 12-10-2018 M892_07755 2643fa397e1f378355625d70f21a0d3a 696 SUPERFAMILY SSF56024 315 497 2.32E-54 T 12-10-2018 M892_07755 2643fa397e1f378355625d70f21a0d3a 696 PIRSF PIRSF015589 1 694 3.9E-253 T 12-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 M892_23715 101ee1ce4f3bbdc59fd3137314104b47 309 Gene3D G3DSA:3.30.530.20 4 151 7.1E-14 T 12-10-2018 IPR023393 START-like domain superfamily M892_23715 101ee1ce4f3bbdc59fd3137314104b47 309 SUPERFAMILY SSF55136 165 301 5.23E-15 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily M892_23715 101ee1ce4f3bbdc59fd3137314104b47 309 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 6 147 9.5E-19 T 12-10-2018 IPR019587 Polyketide cyclase/dehydrase M892_23715 101ee1ce4f3bbdc59fd3137314104b47 309 Gene3D G3DSA:3.20.80.10 158 307 4.7E-23 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily M892_23715 101ee1ce4f3bbdc59fd3137314104b47 309 SMART SM00871 158 309 3.0E-5 T 12-10-2018 IPR010499 Bacterial transcription activator, effector binding M892_23715 101ee1ce4f3bbdc59fd3137314104b47 309 SUPERFAMILY SSF55961 8 146 1.55E-12 T 12-10-2018 M892_23715 101ee1ce4f3bbdc59fd3137314104b47 309 Pfam PF06445 GyrI-like small molecule binding domain 165 306 2.2E-11 T 12-10-2018 IPR029442 GyrI-like small molecule binding domain M892_26515 8561d44b2b6cb10bed42203aad6a08ee 73 SUPERFAMILY SSF53187 12 65 5.5E-12 T 12-10-2018 M892_26515 8561d44b2b6cb10bed42203aad6a08ee 73 Gene3D G3DSA:3.40.630.10 3 68 7.2E-11 T 12-10-2018 M892_18960 691d1fef4de6500edc6e822d259cee0d 359 Gene3D G3DSA:3.90.550.10 1 211 1.8E-25 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M892_18960 691d1fef4de6500edc6e822d259cee0d 359 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 284 311 0.0024 T 12-10-2018 IPR001451 Hexapeptide repeat M892_18960 691d1fef4de6500edc6e822d259cee0d 359 Pfam PF00483 Nucleotidyl transferase 34 203 3.2E-15 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 M892_18960 691d1fef4de6500edc6e822d259cee0d 359 SUPERFAMILY SSF53448 32 209 2.46E-21 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M892_18960 691d1fef4de6500edc6e822d259cee0d 359 Gene3D G3DSA:2.160.10.10 221 337 3.7E-26 T 12-10-2018 M892_18960 691d1fef4de6500edc6e822d259cee0d 359 SUPERFAMILY SSF51161 242 336 8.38E-19 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily M892_04275 203bbf6689bfd1a779cb872c20549335 386 Gene3D G3DSA:3.90.120.10 185 368 3.4E-57 T 12-10-2018 M892_04275 203bbf6689bfd1a779cb872c20549335 386 Pfam PF00145 C-5 cytosine-specific DNA methylase 23 379 1.2E-43 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 M892_04275 203bbf6689bfd1a779cb872c20549335 386 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 23 379 1.3E-43 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 M892_04275 203bbf6689bfd1a779cb872c20549335 386 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 21 37 4.6E-13 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 M892_04275 203bbf6689bfd1a779cb872c20549335 386 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 142 156 4.6E-13 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 M892_04275 203bbf6689bfd1a779cb872c20549335 386 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 189 202 4.6E-13 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 M892_04275 203bbf6689bfd1a779cb872c20549335 386 Gene3D G3DSA:3.40.50.150 24 372 3.4E-57 T 12-10-2018 M892_04275 203bbf6689bfd1a779cb872c20549335 386 SUPERFAMILY SSF53335 19 379 6.09E-60 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M892_15270 3da8955c7093f7e3511a9cf70ab61d6c 147 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 3 142 2.8E-35 T 12-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 M892_15270 3da8955c7093f7e3511a9cf70ab61d6c 147 Pfam PF02050 Flagellar FliJ protein 17 140 1.7E-28 T 12-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 M892_19375 4f652fbbc8224044e1963218d563ded3 121 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 13 116 1.6E-6 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain M892_19375 4f652fbbc8224044e1963218d563ded3 121 Gene3D G3DSA:3.10.180.10 8 121 1.0E-16 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M892_19375 4f652fbbc8224044e1963218d563ded3 121 SUPERFAMILY SSF54593 12 120 1.61E-22 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M892_06015 e57507228112c2690cec41ba4ceec670 411 Pfam PF00271 Helicase conserved C-terminal domain 233 338 1.1E-26 T 12-10-2018 IPR001650 Helicase, C-terminal M892_06015 e57507228112c2690cec41ba4ceec670 411 SUPERFAMILY SSF52540 74 359 6.99E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_06015 e57507228112c2690cec41ba4ceec670 411 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site M892_06015 e57507228112c2690cec41ba4ceec670 411 SMART SM00490 257 338 1.4E-29 T 12-10-2018 IPR001650 Helicase, C-terminal M892_06015 e57507228112c2690cec41ba4ceec670 411 Pfam PF00270 DEAD/DEAH box helicase 25 194 5.8E-48 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 M892_06015 e57507228112c2690cec41ba4ceec670 411 Gene3D G3DSA:3.40.50.300 217 372 8.0E-45 T 12-10-2018 M892_06015 e57507228112c2690cec41ba4ceec670 411 SMART SM00487 20 221 5.9E-60 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain M892_06015 e57507228112c2690cec41ba4ceec670 411 Gene3D G3DSA:3.40.50.300 1 216 9.0E-74 T 12-10-2018 M892_26940 4f7ca8f1b453644d0e2d2070839cc1be 148 SUPERFAMILY SSF47413 8 52 3.66E-5 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 M892_16735 25fb7576a80c49e68c7e20394ba4bfd2 246 Pfam PF02253 Phospholipase A1 15 243 4.4E-53 T 12-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 M892_16735 25fb7576a80c49e68c7e20394ba4bfd2 246 SUPERFAMILY SSF56931 10 244 6.54E-63 T 12-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 M892_16735 25fb7576a80c49e68c7e20394ba4bfd2 246 Gene3D G3DSA:2.40.230.10 5 246 3.7E-56 T 12-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 M892_16735 25fb7576a80c49e68c7e20394ba4bfd2 246 PRINTS PR01486 Bacterial phospholipase A1 protein signature 49 66 9.3E-6 T 12-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 M892_16735 25fb7576a80c49e68c7e20394ba4bfd2 246 PRINTS PR01486 Bacterial phospholipase A1 protein signature 159 177 9.3E-6 T 12-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 M892_16735 25fb7576a80c49e68c7e20394ba4bfd2 246 PRINTS PR01486 Bacterial phospholipase A1 protein signature 217 237 9.3E-6 T 12-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 M892_26395 2dd505b35ec746f0acd34c5cc6fcb4b0 128 SUPERFAMILY SSF101116 9 126 6.54E-36 T 12-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 M892_26395 2dd505b35ec746f0acd34c5cc6fcb4b0 128 Gene3D G3DSA:1.20.120.340 1 127 6.7E-36 T 12-10-2018 M892_26395 2dd505b35ec746f0acd34c5cc6fcb4b0 128 PIRSF PIRSF039090 1 128 4.5E-40 T 12-10-2018 IPR003713 Flagellar protein FliS GO:0044780 M892_26395 2dd505b35ec746f0acd34c5cc6fcb4b0 128 TIGRFAM TIGR00208 fliS: flagellar protein FliS 1 123 3.5E-24 T 12-10-2018 IPR003713 Flagellar protein FliS GO:0044780 M892_26395 2dd505b35ec746f0acd34c5cc6fcb4b0 128 Pfam PF02561 Flagellar protein FliS 7 122 1.5E-32 T 12-10-2018 IPR003713 Flagellar protein FliS GO:0044780 M892_20095 53983df12935d669bb3c4573a126e39b 157 Gene3D G3DSA:3.40.30.10 2 157 7.5E-59 T 12-10-2018 M892_20095 53983df12935d669bb3c4573a126e39b 157 SUPERFAMILY SSF52833 1 156 4.71E-35 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M892_20095 53983df12935d669bb3c4573a126e39b 157 Pfam PF08534 Redoxin 3 154 6.4E-37 T 12-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 M892_04425 0e19088eb04c59b5907284dfa32290a0 1230 Pfam PF05593 RHS Repeat 730 764 9.3E-5 T 12-10-2018 IPR031325 RHS repeat M892_04425 0e19088eb04c59b5907284dfa32290a0 1230 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 720 749 1.1E-4 T 12-10-2018 IPR006530 YD repeat M892_04425 0e19088eb04c59b5907284dfa32290a0 1230 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 924 964 1.0E-6 T 12-10-2018 IPR006530 YD repeat M892_04425 0e19088eb04c59b5907284dfa32290a0 1230 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1116 1147 0.0016 T 12-10-2018 IPR006530 YD repeat M892_00780 a350c2c60cf3e58c41fdecd51f0cb7cc 317 TIGRFAM TIGR00277 HDIG: HDIG domain 249 294 2.0E-7 T 12-10-2018 IPR006675 HDIG domain M892_00780 a350c2c60cf3e58c41fdecd51f0cb7cc 317 SUPERFAMILY SSF109604 239 315 5.62E-19 T 12-10-2018 M892_00780 a350c2c60cf3e58c41fdecd51f0cb7cc 317 Pfam PF01966 HD domain 249 316 5.4E-10 T 12-10-2018 IPR006674 HD domain M892_00780 a350c2c60cf3e58c41fdecd51f0cb7cc 317 Pfam PF01966 HD domain 37 125 4.4E-6 T 12-10-2018 IPR006674 HD domain M892_00780 a350c2c60cf3e58c41fdecd51f0cb7cc 317 Gene3D G3DSA:1.10.3210.10 236 317 9.5E-25 T 12-10-2018 M892_00780 a350c2c60cf3e58c41fdecd51f0cb7cc 317 Gene3D G3DSA:1.10.3210.10 20 199 2.3E-20 T 12-10-2018 M892_00780 a350c2c60cf3e58c41fdecd51f0cb7cc 317 SUPERFAMILY SSF109604 33 194 1.48E-16 T 12-10-2018 M892_11965 a4d4f440988edc442836f587b21ab6e3 124 Pfam PF04892 VanZ like family 33 109 7.4E-11 T 12-10-2018 IPR006976 VanZ-like M892_27235 a54d69cf49ab451f7e7e363d66db0333 258 PIRSF PIRSF006241 1 258 2.0E-99 T 12-10-2018 IPR026040 Hydroxypyruvate isomerase-like M892_27235 a54d69cf49ab451f7e7e363d66db0333 258 SUPERFAMILY SSF51658 1 258 5.53E-85 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily M892_27235 a54d69cf49ab451f7e7e363d66db0333 258 Pfam PF01261 Xylose isomerase-like TIM barrel 21 219 8.8E-36 T 12-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain M892_27235 a54d69cf49ab451f7e7e363d66db0333 258 Gene3D G3DSA:3.20.20.150 1 258 4.8E-81 T 12-10-2018 M892_10800 1207d1324d8ef2546d35b521b1b738a4 159 Hamap MF_00598 Protein Smg [smg]. 2 159 32.596 T 12-10-2018 IPR007456 Smg M892_10800 1207d1324d8ef2546d35b521b1b738a4 159 Pfam PF04361 Protein of unknown function (DUF494) 2 159 6.6E-59 T 12-10-2018 IPR007456 Smg M892_25805 3ebe9cd56b2aa11aadb12f4b9f52622a 440 Pfam PF01609 Transposase DDE domain 132 355 1.9E-18 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_25805 3ebe9cd56b2aa11aadb12f4b9f52622a 440 Pfam PF13006 Insertion element 4 transposase N-terminal 22 112 9.2E-21 T 12-10-2018 IPR024473 Transposase, IS4, N-terminal M892_25805 3ebe9cd56b2aa11aadb12f4b9f52622a 440 SUPERFAMILY SSF53098 104 367 6.68E-22 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_15700 ede3c0a544c228daea7e9947b51f3140 143 Pfam PF02954 Bacterial regulatory protein, Fis family 107 135 5.2E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M892_15700 ede3c0a544c228daea7e9947b51f3140 143 Gene3D G3DSA:1.10.10.60 51 141 2.7E-11 T 12-10-2018 M892_15700 ede3c0a544c228daea7e9947b51f3140 143 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 123 143 4.2E-5 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M892_15700 ede3c0a544c228daea7e9947b51f3140 143 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 106 123 4.2E-5 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M892_15700 ede3c0a544c228daea7e9947b51f3140 143 SUPERFAMILY SSF46689 92 135 1.43E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_26520 2743f8d5c0c2832070feb18760a65106 255 Gene3D G3DSA:3.40.50.12500 18 252 1.2E-66 T 12-10-2018 M892_26520 2743f8d5c0c2832070feb18760a65106 255 Pfam PF01177 Asp/Glu/Hydantoin racemase 82 230 4.7E-7 T 12-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 M892_26520 2743f8d5c0c2832070feb18760a65106 255 PIRSF PIRSF015736 5 252 1.1E-82 T 12-10-2018 IPR026286 Maleate isomerase/Arylmalonate decarboxylase M892_16680 90f2d1d05ac49ead89ac96c3b85ecad2 189 SUPERFAMILY SSF159594 25 189 5.49E-27 T 12-10-2018 M892_16680 90f2d1d05ac49ead89ac96c3b85ecad2 189 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 26 186 4.3E-37 T 12-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component M892_16680 90f2d1d05ac49ead89ac96c3b85ecad2 189 Gene3D G3DSA:3.40.50.10610 16 189 7.1E-11 T 12-10-2018 M892_25745 b65d9606b9f5993b8a2730b54ca27c4c 321 Gene3D G3DSA:2.40.160.10 22 321 4.9E-62 T 12-10-2018 IPR023614 Porin domain superfamily M892_25745 b65d9606b9f5993b8a2730b54ca27c4c 321 Pfam PF13609 Gram-negative porin 7 304 7.9E-28 T 12-10-2018 M892_25745 b65d9606b9f5993b8a2730b54ca27c4c 321 SUPERFAMILY SSF56935 23 321 3.05E-51 T 12-10-2018 M892_19655 6db9518810d9430a1fb6304b0938fd5f 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 158 172 3.3E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_19655 6db9518810d9430a1fb6304b0938fd5f 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 188 3.3E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_19655 6db9518810d9430a1fb6304b0938fd5f 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 188 200 3.3E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_19655 6db9518810d9430a1fb6304b0938fd5f 217 Pfam PF00196 Bacterial regulatory proteins, luxR family 158 212 3.2E-20 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_19655 6db9518810d9430a1fb6304b0938fd5f 217 Gene3D G3DSA:1.10.10.10 155 216 4.9E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_19655 6db9518810d9430a1fb6304b0938fd5f 217 ProSitePatterns PS00622 LuxR-type HTH domain signature. 172 199 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_19655 6db9518810d9430a1fb6304b0938fd5f 217 SMART SM00421 155 212 7.8E-24 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M892_19655 6db9518810d9430a1fb6304b0938fd5f 217 SUPERFAMILY SSF46894 149 214 1.87E-20 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M892_19655 6db9518810d9430a1fb6304b0938fd5f 217 Gene3D G3DSA:3.40.50.2300 8 142 5.8E-25 T 12-10-2018 M892_10010 92d1204e568ba41c5f8bcb93b37e3729 510 Pfam PF02646 RmuC family 181 477 2.4E-106 T 12-10-2018 IPR003798 DNA recombination RmuC M892_18565 f7c0726362f6eb942118bcb91696cb03 143 Gene3D G3DSA:1.10.10.10 97 142 1.9E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_18565 f7c0726362f6eb942118bcb91696cb03 143 Pfam PF02631 RecX family 32 141 7.8E-26 T 12-10-2018 IPR003783 Regulatory protein RecX GO:0006282 M892_18565 f7c0726362f6eb942118bcb91696cb03 143 Hamap MF_01114 Regulatory protein RecX [recX]. 2 143 11.436 T 12-10-2018 IPR003783 Regulatory protein RecX GO:0006282 M892_18565 f7c0726362f6eb942118bcb91696cb03 143 Gene3D G3DSA:1.10.10.10 51 96 6.4E-11 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_13065 47577871e91a483d435970cd4e9e3ded 101 Gene3D G3DSA:3.40.50.2300 2 101 3.6E-39 T 12-10-2018 M892_13065 47577871e91a483d435970cd4e9e3ded 101 SUPERFAMILY SSF52794 1 101 4.06E-37 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 M892_13065 47577871e91a483d435970cd4e9e3ded 101 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 95 2.9E-25 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 M892_11345 5013e6b5d289a217042c63ae6fbdeffe 206 Hamap MF_00015 LexA repressor [lexA]. 3 203 31.818 T 12-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 M892_11345 5013e6b5d289a217042c63ae6fbdeffe 206 Pfam PF00717 Peptidase S24-like 118 183 1.5E-15 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C M892_11345 5013e6b5d289a217042c63ae6fbdeffe 206 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 115 125 1.5E-13 T 12-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 M892_11345 5013e6b5d289a217042c63ae6fbdeffe 206 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 154 166 1.5E-13 T 12-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 M892_11345 5013e6b5d289a217042c63ae6fbdeffe 206 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 126 137 1.5E-13 T 12-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 M892_11345 5013e6b5d289a217042c63ae6fbdeffe 206 Gene3D G3DSA:1.10.10.10 1 69 1.0E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_11345 5013e6b5d289a217042c63ae6fbdeffe 206 Gene3D G3DSA:2.10.109.10 84 206 3.6E-44 T 12-10-2018 M892_11345 5013e6b5d289a217042c63ae6fbdeffe 206 SUPERFAMILY SSF51306 80 202 1.57E-36 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily M892_11345 5013e6b5d289a217042c63ae6fbdeffe 206 SUPERFAMILY SSF46785 3 69 2.33E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_11345 5013e6b5d289a217042c63ae6fbdeffe 206 TIGRFAM TIGR00498 lexA: repressor LexA 1 203 6.4E-81 T 12-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 M892_11345 5013e6b5d289a217042c63ae6fbdeffe 206 Pfam PF01726 LexA DNA binding domain 1 65 3.7E-29 T 12-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 M892_14735 f4e25306446731d1d4663c4a63503985 210 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 3 207 9.5E-110 T 12-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 M892_14735 f4e25306446731d1d4663c4a63503985 210 Pfam PF02508 Rnf-Nqr subunit, membrane protein 9 195 2.6E-62 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 M892_14735 f4e25306446731d1d4663c4a63503985 210 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 2 207 36.823 T 12-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 M892_14735 f4e25306446731d1d4663c4a63503985 210 PIRSF PIRSF006102 3 210 1.2E-73 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 M892_11735 2575495aef871798a88862dcd2069eba 98 SUPERFAMILY SSF46689 8 98 1.84E-24 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_11735 2575495aef871798a88862dcd2069eba 98 Hamap MF_00166 DNA-binding protein Fis [fis]. 1 98 31.402 T 12-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 M892_11735 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 57 69 2.0E-31 T 12-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 M892_11735 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 9 26 2.0E-31 T 12-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 M892_11735 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 26 42 2.0E-31 T 12-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 M892_11735 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 42 57 2.0E-31 T 12-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 M892_11735 2575495aef871798a88862dcd2069eba 98 PIRSF PIRSF002097 1 98 2.6E-44 T 12-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 M892_11735 2575495aef871798a88862dcd2069eba 98 Pfam PF02954 Bacterial regulatory protein, Fis family 55 95 4.0E-14 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M892_11735 2575495aef871798a88862dcd2069eba 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 61 78 3.3E-13 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M892_11735 2575495aef871798a88862dcd2069eba 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 78 98 3.3E-13 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M892_11735 2575495aef871798a88862dcd2069eba 98 Gene3D G3DSA:1.10.10.60 1 98 2.7E-32 T 12-10-2018 M892_15495 35f735ef7b3e3eb09d3d89a507ddf7bd 207 Pfam PF03458 UPF0126 domain 5 76 5.5E-19 T 12-10-2018 IPR005115 Uncharacterised domain UPF0126 M892_15495 35f735ef7b3e3eb09d3d89a507ddf7bd 207 Pfam PF03458 UPF0126 domain 92 163 1.9E-19 T 12-10-2018 IPR005115 Uncharacterised domain UPF0126 M892_04040 7027e619b1544e9ca30a0f7fd213621c 434 Pfam PF00294 pfkB family carbohydrate kinase 86 292 2.1E-10 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB M892_04040 7027e619b1544e9ca30a0f7fd213621c 434 SUPERFAMILY SSF53613 31 417 1.87E-43 T 12-10-2018 IPR029056 Ribokinase-like M892_01860 3a9f93f246a97d359bcca8d1510b1a85 57 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 6 45 4.7E-10 T 12-10-2018 IPR008621 Cbb3-type cytochrome oxidase component M892_21280 553c4f2313e148b5567df751d44223c6 243 Gene3D G3DSA:3.40.50.1580 2 243 1.2E-77 T 12-10-2018 M892_21280 553c4f2313e148b5567df751d44223c6 243 SUPERFAMILY SSF53167 4 219 3.8E-68 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 M892_21280 553c4f2313e148b5567df751d44223c6 243 Pfam PF01048 Phosphorylase superfamily 17 201 1.9E-36 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 M892_16495 95e0a205f7ee03bd559449e0ddacd4ae 381 SUPERFAMILY SSF52151 24 300 6.54E-36 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase M892_16495 95e0a205f7ee03bd559449e0ddacd4ae 381 Gene3D G3DSA:3.40.1090.10 15 122 2.0E-10 T 12-10-2018 M892_16495 95e0a205f7ee03bd559449e0ddacd4ae 381 Gene3D G3DSA:3.40.1090.10 139 260 7.4E-6 T 12-10-2018 M892_16495 95e0a205f7ee03bd559449e0ddacd4ae 381 Pfam PF01734 Patatin-like phospholipase 30 199 4.4E-19 T 12-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 M892_14240 1595fcd4e2c15699b512796e7ea2d892 782 Gene3D G3DSA:2.40.10.220 466 582 7.9E-6 T 12-10-2018 M892_14240 1595fcd4e2c15699b512796e7ea2d892 782 SUPERFAMILY SSF141371 466 549 8.63E-7 T 12-10-2018 M892_14240 1595fcd4e2c15699b512796e7ea2d892 782 Pfam PF07238 PilZ domain 145 232 6.4E-8 T 12-10-2018 IPR009875 PilZ domain GO:0035438 M892_14240 1595fcd4e2c15699b512796e7ea2d892 782 Pfam PF07238 PilZ domain 470 560 8.5E-12 T 12-10-2018 IPR009875 PilZ domain GO:0035438 M892_25335 a36955d07536f6b496d65c91d54f9728 478 Gene3D G3DSA:2.40.180.10 1 478 2.8E-231 T 12-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 M892_25335 a36955d07536f6b496d65c91d54f9728 478 Pfam PF00199 Catalase 6 386 6.8E-191 T 12-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 M892_25335 a36955d07536f6b496d65c91d54f9728 478 ProSitePatterns PS00438 Catalase proximal active site signature. 42 58 - T 12-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 M892_25335 a36955d07536f6b496d65c91d54f9728 478 PRINTS PR00067 Catalase signature 19 42 1.1E-72 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 M892_25335 a36955d07536f6b496d65c91d54f9728 478 PRINTS PR00067 Catalase signature 82 100 1.1E-72 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 M892_25335 a36955d07536f6b496d65c91d54f9728 478 PRINTS PR00067 Catalase signature 287 314 1.1E-72 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 M892_25335 a36955d07536f6b496d65c91d54f9728 478 PRINTS PR00067 Catalase signature 103 120 1.1E-72 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 M892_25335 a36955d07536f6b496d65c91d54f9728 478 PRINTS PR00067 Catalase signature 319 345 1.1E-72 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 M892_25335 a36955d07536f6b496d65c91d54f9728 478 PRINTS PR00067 Catalase signature 122 140 1.1E-72 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 M892_25335 a36955d07536f6b496d65c91d54f9728 478 SMART SM01060 6 390 1.1E-288 T 12-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 M892_25335 a36955d07536f6b496d65c91d54f9728 478 PIRSF PIRSF038928 1 478 3.9E-223 T 12-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 M892_25335 a36955d07536f6b496d65c91d54f9728 478 Pfam PF06628 Catalase-related immune-responsive 415 473 1.4E-21 T 12-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 M892_25335 a36955d07536f6b496d65c91d54f9728 478 SUPERFAMILY SSF56634 4 477 1.11E-215 T 12-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 M892_25335 a36955d07536f6b496d65c91d54f9728 478 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 332 340 - T 12-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 M892_10015 b1676e286d88346396e9d45096a40ab7 302 SUPERFAMILY SSF103481 189 287 3.01E-9 T 12-10-2018 M892_10015 b1676e286d88346396e9d45096a40ab7 302 Pfam PF00892 EamA-like transporter family 9 141 8.3E-18 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M892_10015 b1676e286d88346396e9d45096a40ab7 302 Pfam PF00892 EamA-like transporter family 155 286 1.6E-16 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M892_10015 b1676e286d88346396e9d45096a40ab7 302 SUPERFAMILY SSF103481 65 144 3.4E-11 T 12-10-2018 M892_09760 d09077bb066f74aa9497cf7cb3e87e4e 217 Pfam PF00156 Phosphoribosyl transferase domain 121 213 6.1E-13 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 M892_09760 d09077bb066f74aa9497cf7cb3e87e4e 217 Gene3D G3DSA:3.40.50.2020 83 214 9.1E-17 T 12-10-2018 M892_09760 d09077bb066f74aa9497cf7cb3e87e4e 217 SUPERFAMILY SSF53271 41 214 8.78E-33 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like M892_12000 db3c6c20f92afeb860cefc8ec57d72d0 144 SMART SM00450 40 138 8.0E-21 T 12-10-2018 IPR001763 Rhodanese-like domain M892_12000 db3c6c20f92afeb860cefc8ec57d72d0 144 SUPERFAMILY SSF52821 15 143 7.86E-31 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily M892_12000 db3c6c20f92afeb860cefc8ec57d72d0 144 Gene3D G3DSA:3.40.250.10 22 143 6.1E-25 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily M892_12000 db3c6c20f92afeb860cefc8ec57d72d0 144 Pfam PF00581 Rhodanese-like domain 44 135 7.4E-17 T 12-10-2018 IPR001763 Rhodanese-like domain M892_16380 01452856b2143baeb16c38292f0836b3 193 Pfam PF01548 Transposase 8 142 1.2E-15 T 12-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 M892_20755 36a70b21f0d7e86d6c38371c90b005fe 350 PIRSF PIRSF001361 1 350 5.1E-160 T 12-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 M892_20755 36a70b21f0d7e86d6c38371c90b005fe 350 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 5 348 9.4E-169 T 12-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 M892_20755 36a70b21f0d7e86d6c38371c90b005fe 350 Pfam PF00793 DAHP synthetase I family 38 337 3.1E-106 T 12-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 M892_20755 36a70b21f0d7e86d6c38371c90b005fe 350 Gene3D G3DSA:3.20.20.70 1 349 2.4E-164 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M892_20755 36a70b21f0d7e86d6c38371c90b005fe 350 SUPERFAMILY SSF51569 6 347 6.59E-137 T 12-10-2018 M892_22735 6cd421f1e973bc64fc7e411e32176ed3 429 Pfam PF01609 Transposase DDE domain 126 357 9.3E-23 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_22735 6cd421f1e973bc64fc7e411e32176ed3 429 Pfam PF13006 Insertion element 4 transposase N-terminal 16 108 1.1E-24 T 12-10-2018 IPR024473 Transposase, IS4, N-terminal M892_22735 6cd421f1e973bc64fc7e411e32176ed3 429 SUPERFAMILY SSF53098 103 412 1.21E-18 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_09105 a7cce014599a851da5a362b0f6ba5fe0 129 SUPERFAMILY SSF53137 14 129 6.54E-48 T 12-10-2018 M892_09105 a7cce014599a851da5a362b0f6ba5fe0 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 129 32.665 T 12-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 M892_09105 a7cce014599a851da5a362b0f6ba5fe0 129 Pfam PF00411 Ribosomal protein S11 19 128 1.5E-52 T 12-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 M892_09105 a7cce014599a851da5a362b0f6ba5fe0 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 12-10-2018 IPR018102 Ribosomal S11, conserved site M892_09105 a7cce014599a851da5a362b0f6ba5fe0 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 4.2E-55 T 12-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_09105 a7cce014599a851da5a362b0f6ba5fe0 129 Gene3D G3DSA:3.30.420.80 1 129 3.3E-57 T 12-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 M892_09105 a7cce014599a851da5a362b0f6ba5fe0 129 PIRSF PIRSF002131 1 129 2.1E-52 T 12-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 M892_18710 b50390f27989ce73f9a071ff03f66887 255 PIRSF PIRSF028069 1 255 4.1E-109 T 12-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 M892_18710 b50390f27989ce73f9a071ff03f66887 255 Pfam PF11932 Protein of unknown function (DUF3450) 9 248 1.4E-85 T 12-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 M892_05425 20ac7e5e92d6bda22187b997d950b1a1 252 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 248 46.619 T 12-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 M892_05425 20ac7e5e92d6bda22187b997d950b1a1 252 SUPERFAMILY SSF53448 1 249 1.17E-63 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M892_05425 20ac7e5e92d6bda22187b997d950b1a1 252 Pfam PF02348 Cytidylyltransferase 5 221 7.4E-67 T 12-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 M892_05425 20ac7e5e92d6bda22187b997d950b1a1 252 Gene3D G3DSA:3.90.550.10 1 252 4.3E-98 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M892_05425 20ac7e5e92d6bda22187b997d950b1a1 252 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 241 1.6E-117 T 12-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 M892_27670 7b54a0f78bf97ca9119570cba0790e66 236 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 40 104 1.2E-7 T 12-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 M892_27670 7b54a0f78bf97ca9119570cba0790e66 236 SUPERFAMILY SSF53187 7 231 9.26E-29 T 12-10-2018 M892_27670 7b54a0f78bf97ca9119570cba0790e66 236 Gene3D G3DSA:3.40.630.10 1 236 1.0E-59 T 12-10-2018 M892_14810 3d495d3b9ac26542d36c7273fa7e0dae 68 Hamap MF_01064 UPF0253 protein YaeP [yaeP]. 1 68 30.011 T 12-10-2018 IPR009624 Uncharacterised protein family UPF0253 M892_14810 3d495d3b9ac26542d36c7273fa7e0dae 68 Pfam PF06786 Uncharacterised protein family (UPF0253) 1 67 3.3E-36 T 12-10-2018 IPR009624 Uncharacterised protein family UPF0253 M892_14810 3d495d3b9ac26542d36c7273fa7e0dae 68 ProDom PD054643 UPF0253 YAEP CYTOPLASMIC VP2335 YPO1064.1/Y3113/YP2785 VC0872 VV2574 PBPRA2947 VV11836 7 65 4.0E-26 T 12-10-2018 IPR009624 Uncharacterised protein family UPF0253 M892_10375 5722c517897a4da0a0247bfe55a8bddd 194 SUPERFAMILY SSF46689 4 84 1.95E-18 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_10375 5722c517897a4da0a0247bfe55a8bddd 194 Gene3D G3DSA:1.10.357.10 1 194 9.5E-68 T 12-10-2018 M892_10375 5722c517897a4da0a0247bfe55a8bddd 194 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site M892_10375 5722c517897a4da0a0247bfe55a8bddd 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 3.9E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M892_10375 5722c517897a4da0a0247bfe55a8bddd 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 3.9E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M892_10375 5722c517897a4da0a0247bfe55a8bddd 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 60 1.1E-16 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M892_16305 b90aafddf8e3b82072d46c92cb8b3ae2 202 Pfam PF02810 SEC-C motif 184 202 1.5E-9 T 12-10-2018 IPR004027 SEC-C motif M892_16305 b90aafddf8e3b82072d46c92cb8b3ae2 202 Gene3D G3DSA:3.10.450.50 147 202 2.8E-9 T 12-10-2018 M892_16305 b90aafddf8e3b82072d46c92cb8b3ae2 202 SUPERFAMILY SSF103642 182 201 3.27E-7 T 12-10-2018 M892_16305 b90aafddf8e3b82072d46c92cb8b3ae2 202 Pfam PF03695 Uncharacterised protein family (UPF0149) 18 151 4.9E-7 T 12-10-2018 IPR011978 Uncharacterised protein family UPF0149 M892_20860 6dd668f9ba0e6970cd058dcae3f4f898 236 Pfam PF00899 ThiF family 12 232 4.4E-47 T 12-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 M892_20860 6dd668f9ba0e6970cd058dcae3f4f898 236 Gene3D G3DSA:3.40.50.720 4 236 1.4E-69 T 12-10-2018 M892_20860 6dd668f9ba0e6970cd058dcae3f4f898 236 SUPERFAMILY SSF69572 4 236 3.53E-72 T 12-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 M892_20860 6dd668f9ba0e6970cd058dcae3f4f898 236 TIGRFAM TIGR02355 moeB: molybdopterin synthase sulfurylase MoeB 8 235 1.2E-116 T 12-10-2018 IPR012730 Molybdopterin synthase sulfurylase MoeB GO:0006777 MetaCyc: PWY-6823 M892_19240 7d0d6c07ec900b6283f47ffe5120d7a5 289 SUPERFAMILY SSF103481 184 279 1.03E-12 T 12-10-2018 M892_19240 7d0d6c07ec900b6283f47ffe5120d7a5 289 SUPERFAMILY SSF103481 39 139 1.44E-7 T 12-10-2018 M892_19240 7d0d6c07ec900b6283f47ffe5120d7a5 289 Pfam PF00892 EamA-like transporter family 145 275 6.3E-15 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M892_19240 7d0d6c07ec900b6283f47ffe5120d7a5 289 Pfam PF00892 EamA-like transporter family 4 134 2.0E-6 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M892_16270 4dbfb7c8bb10af329fab4e5665849816 322 Gene3D G3DSA:3.40.50.2300 47 293 3.5E-100 T 12-10-2018 M892_16270 4dbfb7c8bb10af329fab4e5665849816 322 Pfam PF04392 ABC transporter substrate binding protein 30 321 5.5E-113 T 12-10-2018 IPR007487 ABC transporter, substrate-binding protein M892_16270 4dbfb7c8bb10af329fab4e5665849816 322 Gene3D G3DSA:3.40.50.2300 144 315 3.5E-100 T 12-10-2018 M892_16270 4dbfb7c8bb10af329fab4e5665849816 322 SUPERFAMILY SSF53822 50 253 1.59E-17 T 12-10-2018 IPR028082 Periplasmic binding protein-like I M892_26980 83625a05104ff4907b018ef844c72c39 443 Gene3D G3DSA:2.40.170.10 23 443 2.0E-136 T 12-10-2018 IPR036998 Porin, LamB-type superfamily GO:0015288|GO:0016020|GO:0034219 M892_26980 83625a05104ff4907b018ef844c72c39 443 Pfam PF02264 LamB porin 25 443 1.5E-123 T 12-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 M892_26980 83625a05104ff4907b018ef844c72c39 443 Hamap MF_01301 Maltoporin [lamB]. 1 443 47.33 T 12-10-2018 IPR023738 Maltoporin GO:0009279|GO:0015481|GO:0015768|GO:0042956|GO:0042958 M892_26980 83625a05104ff4907b018ef844c72c39 443 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 30 438 0.0 T 12-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 M892_26980 83625a05104ff4907b018ef844c72c39 443 SUPERFAMILY SSF56935 23 443 1.05E-130 T 12-10-2018 M892_08955 3dbe78bf8aed351f0a32ad0d0047238c 119 Pfam PF10973 Protein of unknown function (DUF2799) 29 112 1.2E-19 T 12-10-2018 IPR021242 Protein of unknown function DUF2799 M892_05400 ede00d5fbaeb31702ca4f95f12d1d98c 221 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 9 205 4.6E-8 T 12-10-2018 IPR002751 Metal transport protein CbiM/NikMN GO:0000041|GO:0016021 M892_19820 52a3e6f324da3eee814949b314320c52 395 Pfam PF07690 Major Facilitator Superfamily 14 348 1.5E-31 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 M892_19820 52a3e6f324da3eee814949b314320c52 395 SUPERFAMILY SSF103473 7 383 1.83E-56 T 12-10-2018 IPR036259 MFS transporter superfamily M892_19820 52a3e6f324da3eee814949b314320c52 395 Gene3D G3DSA:1.20.1250.20 4 382 5.8E-45 T 12-10-2018 M892_26615 2c2a0a6cad86bb1b80c88937202dd2aa 265 SMART SM00858 141 202 4.5E-7 T 12-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 M892_26615 2c2a0a6cad86bb1b80c88937202dd2aa 265 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 129 264 3.9E-39 T 12-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal M892_26615 2c2a0a6cad86bb1b80c88937202dd2aa 265 Gene3D G3DSA:2.30.30.760 206 265 9.4E-12 T 12-10-2018 M892_26615 2c2a0a6cad86bb1b80c88937202dd2aa 265 Pfam PF13144 Chaperone for flagella basal body P-ring formation 93 261 1.5E-43 T 12-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal M892_23890 9a0f06f222d6fa0f032a58e9a825b2f7 247 SUPERFAMILY SSF52540 8 241 1.52E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_23890 9a0f06f222d6fa0f032a58e9a825b2f7 247 Gene3D G3DSA:3.40.50.300 4 246 1.5E-73 T 12-10-2018 M892_23890 9a0f06f222d6fa0f032a58e9a825b2f7 247 Pfam PF00005 ABC transporter 23 175 8.5E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_23890 9a0f06f222d6fa0f032a58e9a825b2f7 247 PIRSF PIRSF039085 5 247 3.7E-92 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 M892_23890 9a0f06f222d6fa0f032a58e9a825b2f7 247 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_23890 9a0f06f222d6fa0f032a58e9a825b2f7 247 SMART SM00382 32 223 1.8E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_24825 423e3242aad588abae02c5195880d78e 101 SUPERFAMILY SSF81296 11 96 2.05E-15 T 12-10-2018 IPR014756 Immunoglobulin E-set M892_24825 423e3242aad588abae02c5195880d78e 101 Gene3D G3DSA:2.60.40.10 6 99 5.6E-18 T 12-10-2018 IPR013783 Immunoglobulin-like fold M892_24825 423e3242aad588abae02c5195880d78e 101 SMART SM01065 12 93 0.0021 T 12-10-2018 IPR002044 Carbohydrate binding module family 20 GO:2001070 M892_28540 e8bca2f22b16347c7e10fcb455825a08 215 Gene3D G3DSA:3.40.50.880 1 215 1.1E-88 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M892_28540 e8bca2f22b16347c7e10fcb455825a08 215 SUPERFAMILY SSF52317 1 212 5.63E-54 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M892_28540 e8bca2f22b16347c7e10fcb455825a08 215 PIRSF PIRSF006320 1 215 1.4E-98 T 12-10-2018 IPR026041 Glyoxalase ElbB M892_12870 ff98def1c7aa6bf2071e21805f453c14 148 SUPERFAMILY SSF55804 1 145 2.09E-41 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 M892_12870 ff98def1c7aa6bf2071e21805f453c14 148 Gene3D G3DSA:3.40.930.10 1 148 3.2E-53 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 M892_12870 ff98def1c7aa6bf2071e21805f453c14 148 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 2 145 2.0E-52 T 12-10-2018 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 M892_12870 ff98def1c7aa6bf2071e21805f453c14 148 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 146 3.4E-38 T 12-10-2018 IPR002178 PTS EIIA type-2 domain M892_12870 ff98def1c7aa6bf2071e21805f453c14 148 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 51 67 - T 12-10-2018 IPR002178 PTS EIIA type-2 domain M892_05015 406048cdaa3eba777c7de7aabff8beb3 128 Pfam PF13356 Arm DNA-binding domain 5 92 1.7E-16 T 12-10-2018 IPR025166 Integrase, DNA-binding domain M892_05015 406048cdaa3eba777c7de7aabff8beb3 128 Gene3D G3DSA:3.30.160.390 3 109 1.3E-22 T 12-10-2018 IPR038488 Integrase, DNA-binding domain superfamily M892_20710 1c31b09b908619fc90b86af4ca0639de 546 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 50 492 4.0E-151 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_20710 1c31b09b908619fc90b86af4ca0639de 546 SUPERFAMILY SSF81442 38 545 3.14E-194 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_20710 1c31b09b908619fc90b86af4ca0639de 546 Gene3D G3DSA:1.20.210.10 28 546 8.7E-219 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_20710 1c31b09b908619fc90b86af4ca0639de 546 PRINTS PR01165 Cytochrome c oxidase subunit I signature 268 289 3.5E-121 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_20710 1c31b09b908619fc90b86af4ca0639de 546 PRINTS PR01165 Cytochrome c oxidase subunit I signature 373 391 3.5E-121 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_20710 1c31b09b908619fc90b86af4ca0639de 546 PRINTS PR01165 Cytochrome c oxidase subunit I signature 401 420 3.5E-121 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_20710 1c31b09b908619fc90b86af4ca0639de 546 PRINTS PR01165 Cytochrome c oxidase subunit I signature 217 236 3.5E-121 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_20710 1c31b09b908619fc90b86af4ca0639de 546 PRINTS PR01165 Cytochrome c oxidase subunit I signature 314 329 3.5E-121 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_20710 1c31b09b908619fc90b86af4ca0639de 546 PRINTS PR01165 Cytochrome c oxidase subunit I signature 88 111 3.5E-121 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_20710 1c31b09b908619fc90b86af4ca0639de 546 PRINTS PR01165 Cytochrome c oxidase subunit I signature 158 170 3.5E-121 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_20710 1c31b09b908619fc90b86af4ca0639de 546 PRINTS PR01165 Cytochrome c oxidase subunit I signature 41 66 3.5E-121 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_20710 1c31b09b908619fc90b86af4ca0639de 546 PRINTS PR01165 Cytochrome c oxidase subunit I signature 338 359 3.5E-121 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_20710 1c31b09b908619fc90b86af4ca0639de 546 PRINTS PR01165 Cytochrome c oxidase subunit I signature 115 139 3.5E-121 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_20710 1c31b09b908619fc90b86af4ca0639de 546 PRINTS PR01165 Cytochrome c oxidase subunit I signature 188 206 3.5E-121 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_20710 1c31b09b908619fc90b86af4ca0639de 546 PRINTS PR01165 Cytochrome c oxidase subunit I signature 451 472 3.5E-121 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_20710 1c31b09b908619fc90b86af4ca0639de 546 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 42 545 3.4E-213 T 12-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 M892_20710 1c31b09b908619fc90b86af4ca0639de 546 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 270 324 - T 12-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_02335 cfebc862149666d0389570cde406e4e3 144 Pfam PF06127 Protein of unknown function (DUF962) 1 142 8.7E-21 T 12-10-2018 IPR009305 Protein of unknown function DUF962 M892_17825 55474a83ee0e47103fbb6a6364aaa726 440 Pfam PF13007 Transposase C of IS166 homeodomain 5 38 1.1E-5 T 12-10-2018 IPR024463 Transposase TnpC, homeodomain M892_17825 55474a83ee0e47103fbb6a6364aaa726 440 Pfam PF13817 IS66 C-terminal element 400 436 6.2E-8 T 12-10-2018 IPR039552 Transposase IS66, C-terminal M892_17825 55474a83ee0e47103fbb6a6364aaa726 440 Pfam PF13005 zinc-finger binding domain of transposase IS66 46 90 1.3E-16 T 12-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 M892_17825 55474a83ee0e47103fbb6a6364aaa726 440 Pfam PF03050 Transposase IS66 family 110 393 1.3E-101 T 12-10-2018 IPR004291 Transposase, IS66 M892_20570 6949aaab3e32d0fdf65402f121ab36a9 133 Gene3D G3DSA:3.90.1590.10 1 118 3.6E-13 T 12-10-2018 M892_20570 6949aaab3e32d0fdf65402f121ab36a9 133 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 28 117 6.7E-21 T 12-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 M892_20570 6949aaab3e32d0fdf65402f121ab36a9 133 SUPERFAMILY SSF51316 3 131 1.46E-33 T 12-10-2018 IPR011057 Mss4-like superfamily M892_00180 443d58a42b394a3709ce790a25d10d1e 147 Gene3D G3DSA:2.40.128.270 40 142 6.3E-30 T 12-10-2018 IPR038670 HslJ-like superfamily M892_00180 443d58a42b394a3709ce790a25d10d1e 147 Pfam PF03724 META domain 34 138 1.2E-27 T 12-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ M892_11265 565f49fae9b5cb062faaef737f080398 73 Pfam PF10678 Protein of unknown function (DUF2492) 3 72 1.2E-23 T 12-10-2018 IPR019620 Putative metal-binding protein M892_11265 565f49fae9b5cb062faaef737f080398 73 TIGRFAM TIGR03853 matur_matur: putative metal-binding protein 3 73 1.2E-24 T 12-10-2018 IPR019620 Putative metal-binding protein M892_05990 27d5f983f91b6ed216f82ad959d41ade 489 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 5 475 45.356 T 12-10-2018 IPR003846 Uncharacterised protein family UPF0061 M892_05990 27d5f983f91b6ed216f82ad959d41ade 489 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 7 458 7.4E-156 T 12-10-2018 IPR003846 Uncharacterised protein family UPF0061 M892_25240 9dfccbc12ab7e72fe9cb782c622bc8d2 159 Pfam PF13358 DDE superfamily endonuclease 9 124 1.2E-27 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_25240 9dfccbc12ab7e72fe9cb782c622bc8d2 159 Gene3D G3DSA:3.30.420.470 4 153 1.1E-11 T 12-10-2018 M892_25240 9dfccbc12ab7e72fe9cb782c622bc8d2 159 SUPERFAMILY SSF53098 33 130 3.03E-8 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_00220 53e6509645c5bd38ee8e6b924896bf38 431 Pfam PF09335 SNARE associated Golgi protein 23 147 2.5E-17 T 12-10-2018 IPR032816 SNARE associated Golgi protein M892_00220 53e6509645c5bd38ee8e6b924896bf38 431 Pfam PF14067 LssY C-terminus 248 385 1.9E-38 T 12-10-2018 IPR025902 LssY-like C-terminal domain M892_11970 fa7e71e65f6c89bbed34719cfd586b69 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 4.1E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M892_11970 fa7e71e65f6c89bbed34719cfd586b69 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 4.1E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M892_11970 fa7e71e65f6c89bbed34719cfd586b69 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 53 7.3E-13 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M892_11970 fa7e71e65f6c89bbed34719cfd586b69 211 Gene3D G3DSA:1.10.357.10 1 209 6.2E-65 T 12-10-2018 M892_11970 fa7e71e65f6c89bbed34719cfd586b69 211 SUPERFAMILY SSF46689 2 71 1.31E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_11970 fa7e71e65f6c89bbed34719cfd586b69 211 Pfam PF13972 Bacterial transcriptional repressor 57 199 1.1E-43 T 12-10-2018 IPR025722 Bacterial transcriptional repressor TetR M892_20090 33b470187ebebf5df99066aba0b1a7ba 234 SUPERFAMILY SSF53335 4 202 7.06E-35 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M892_20090 33b470187ebebf5df99066aba0b1a7ba 234 Pfam PF08241 Methyltransferase domain 44 139 1.0E-17 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 M892_20090 33b470187ebebf5df99066aba0b1a7ba 234 Gene3D G3DSA:3.40.50.150 25 232 6.8E-40 T 12-10-2018 M892_00725 d05e7a9d2fa679fe90d904eadece9e1b 178 SUPERFAMILY SSF52172 26 153 2.13E-19 T 12-10-2018 IPR011006 CheY-like superfamily M892_00725 d05e7a9d2fa679fe90d904eadece9e1b 178 Pfam PF00072 Response regulator receiver domain 28 146 3.2E-14 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_00725 d05e7a9d2fa679fe90d904eadece9e1b 178 SMART SM00448 25 146 1.0E-13 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_00725 d05e7a9d2fa679fe90d904eadece9e1b 178 Gene3D G3DSA:3.40.50.2300 26 159 3.2E-19 T 12-10-2018 M892_13020 9f678906179f4f958334704fcb54cfb9 366 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 346 6.1E-116 T 12-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 M892_13020 9f678906179f4f958334704fcb54cfb9 366 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 343 1.0E-68 T 12-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 M892_13900 801324c90bf0e2152a19671c2e0aaa49 122 ProDom PD020773 UPF0231 YACL UNCHARACTERISED UCP006287 VC0605 UNCHARACTERIZED 3'REGION VV2750 BCR OXIDASE 1 120 4.0E-59 T 12-10-2018 IPR008249 Uncharacterised protein family UPF0231 M892_13900 801324c90bf0e2152a19671c2e0aaa49 122 Hamap MF_01053 UPF0231 protein YacL [yacL]. 1 122 30.849 T 12-10-2018 IPR008249 Uncharacterised protein family UPF0231 M892_13900 801324c90bf0e2152a19671c2e0aaa49 122 Pfam PF06062 Uncharacterised protein family (UPF0231) 1 120 1.5E-42 T 12-10-2018 IPR008249 Uncharacterised protein family UPF0231 M892_13900 801324c90bf0e2152a19671c2e0aaa49 122 PIRSF PIRSF006287 1 122 4.7E-49 T 12-10-2018 IPR008249 Uncharacterised protein family UPF0231 M892_24610 29d0c2b32c3e87fb260588766b4ca498 365 Pfam PF13407 Periplasmic binding protein domain 69 322 3.3E-14 T 12-10-2018 IPR025997 Periplasmic binding protein M892_24610 29d0c2b32c3e87fb260588766b4ca498 365 Gene3D G3DSA:3.40.50.2300 180 359 4.1E-151 T 12-10-2018 M892_24610 29d0c2b32c3e87fb260588766b4ca498 365 Gene3D G3DSA:3.40.50.2300 33 363 4.1E-151 T 12-10-2018 M892_24610 29d0c2b32c3e87fb260588766b4ca498 365 SUPERFAMILY SSF53822 27 364 2.5E-87 T 12-10-2018 IPR028082 Periplasmic binding protein-like I M892_02665 c53efdaae2dac8004fc92f54e6384f49 204 SMART SM00855 5 154 5.0E-10 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 M892_02665 c53efdaae2dac8004fc92f54e6384f49 204 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 186 5.4E-37 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 M892_02665 c53efdaae2dac8004fc92f54e6384f49 204 SUPERFAMILY SSF53254 1 185 7.92E-37 T 12-10-2018 IPR029033 Histidine phosphatase superfamily M892_02665 c53efdaae2dac8004fc92f54e6384f49 204 TIGRFAM TIGR03162 ribazole_cobC: alpha-ribazole phosphatase 6 182 3.2E-49 T 12-10-2018 IPR017578 Alpha-ribazole phosphatase, CobC GO:0009236|GO:0043755 KEGG: 00860+3.1.3.73|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 M892_02665 c53efdaae2dac8004fc92f54e6384f49 204 Gene3D G3DSA:3.40.50.1240 1 204 4.9E-58 T 12-10-2018 IPR029033 Histidine phosphatase superfamily M892_02665 c53efdaae2dac8004fc92f54e6384f49 204 PIRSF PIRSF000709 2 172 2.7E-4 T 12-10-2018 M892_13680 989ddc637b4926ddd08b1a752a4dc9fa 264 Pfam PF01578 Cytochrome C assembly protein 39 262 8.9E-46 T 12-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 M892_18110 471da3033fd5d57b38cb5c1a59637948 109 Gene3D G3DSA:1.10.3730.20 1 109 1.0E-26 T 12-10-2018 M892_18110 471da3033fd5d57b38cb5c1a59637948 109 SUPERFAMILY SSF103481 4 106 1.7E-15 T 12-10-2018 M892_18110 471da3033fd5d57b38cb5c1a59637948 109 Pfam PF00893 Small Multidrug Resistance protein 1 94 7.6E-17 T 12-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 M892_14740 33a93e303d0defeaf98ac8a1e258089f 198 PIRSF PIRSF006102 1 198 4.2E-66 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 M892_14740 33a93e303d0defeaf98ac8a1e258089f 198 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 2 197 7.0E-108 T 12-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 M892_14740 33a93e303d0defeaf98ac8a1e258089f 198 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 196 1.3E-59 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 M892_14740 33a93e303d0defeaf98ac8a1e258089f 198 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 198 29.927 T 12-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 M892_27495 adbb469c83c6bbed3dec661b8fdd6902 88 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 12 81 3.0E-18 T 12-10-2018 IPR000504 RNA recognition motif domain GO:0003676 M892_27495 adbb469c83c6bbed3dec661b8fdd6902 88 SUPERFAMILY SSF54928 11 87 3.9E-23 T 12-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 M892_27495 adbb469c83c6bbed3dec661b8fdd6902 88 SMART SM00360 11 84 4.0E-21 T 12-10-2018 IPR000504 RNA recognition motif domain GO:0003676 M892_27495 adbb469c83c6bbed3dec661b8fdd6902 88 Gene3D G3DSA:3.30.70.330 9 88 7.8E-23 T 12-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily M892_20890 1c72d782f27c7ed5e9a94f68bd6b9c8c 139 SUPERFAMILY SSF47413 2 61 7.88E-6 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 M892_20890 1c72d782f27c7ed5e9a94f68bd6b9c8c 139 Gene3D G3DSA:1.10.260.40 2 66 7.8E-6 T 12-10-2018 M892_06770 b4eb4140575e78fb9513054e0f15c91e 212 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 13 209 2.6E-38 T 12-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 M892_06770 b4eb4140575e78fb9513054e0f15c91e 212 SUPERFAMILY SSF89392 27 210 4.32E-49 T 12-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX M892_06770 b4eb4140575e78fb9513054e0f15c91e 212 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 11 210 26.844 T 12-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 M892_06770 b4eb4140575e78fb9513054e0f15c91e 212 Gene3D G3DSA:2.50.20.10 32 211 3.1E-51 T 12-10-2018 M892_06770 b4eb4140575e78fb9513054e0f15c91e 212 Pfam PF03550 Outer membrane lipoprotein LolB 52 208 4.1E-43 T 12-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 M892_06540 7805a418bd9247c16993691b406df76f 637 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 590 636 1.0E-9 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain M892_06540 7805a418bd9247c16993691b406df76f 637 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 5 334 2.4E-60 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 M892_06540 7805a418bd9247c16993691b406df76f 637 SUPERFAMILY SSF64518 146 636 8.11E-25 T 12-10-2018 M892_06540 7805a418bd9247c16993691b406df76f 637 PRINTS PR01005 Flagellar hook-associated protein signature 158 182 3.3E-12 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 M892_06540 7805a418bd9247c16993691b406df76f 637 PRINTS PR01005 Flagellar hook-associated protein signature 360 382 3.3E-12 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 M892_06540 7805a418bd9247c16993691b406df76f 637 PRINTS PR01005 Flagellar hook-associated protein signature 12 35 3.3E-12 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 M892_06540 7805a418bd9247c16993691b406df76f 637 PRINTS PR01005 Flagellar hook-associated protein signature 125 145 3.3E-12 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 M892_06540 7805a418bd9247c16993691b406df76f 637 PRINTS PR01005 Flagellar hook-associated protein signature 50 72 3.3E-12 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 M892_06540 7805a418bd9247c16993691b406df76f 637 PRINTS PR01005 Flagellar hook-associated protein signature 407 424 3.3E-12 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 M892_05155 8f2b1adc140d341851fef023185acab8 323 Gene3D G3DSA:3.40.50.150 64 292 4.9E-21 T 12-10-2018 M892_05155 8f2b1adc140d341851fef023185acab8 323 SUPERFAMILY SSF53335 91 323 1.18E-32 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M892_05155 8f2b1adc140d341851fef023185acab8 323 Pfam PF08003 Protein of unknown function (DUF1698) 7 322 6.7E-173 T 12-10-2018 IPR027555 tRNA (mo5U34)-methyltransferase-like M892_05155 8f2b1adc140d341851fef023185acab8 323 Hamap MF_01590 tRNA U34 carboxymethyltransferase [cmoB]. 13 322 54.369 T 12-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 M892_05155 8f2b1adc140d341851fef023185acab8 323 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 12 321 1.1E-147 T 12-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 M892_04330 59e643b0a39c1844ecd33df5bd76064d 318 Pfam PF03547 Membrane transport protein 164 307 2.5E-13 T 12-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 M892_25005 99ebab04a45a221b8ef9c231171d3cdb 93 Pfam PF00583 Acetyltransferase (GNAT) family 1 75 8.9E-12 T 12-10-2018 IPR000182 GNAT domain M892_25005 99ebab04a45a221b8ef9c231171d3cdb 93 Gene3D G3DSA:3.40.630.30 1 89 1.3E-16 T 12-10-2018 M892_25005 99ebab04a45a221b8ef9c231171d3cdb 93 SUPERFAMILY SSF55729 1 84 1.43E-16 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_19300 0764d597027bdabd13517544749d1d59 142 Pfam PF10990 Protein of unknown function (DUF2809) 50 132 2.3E-22 T 12-10-2018 IPR021257 Protein of unknown function DUF2809 M892_19280 e35ccc0cac1c7847f977c88a6d50879c 170 Pfam PF10973 Protein of unknown function (DUF2799) 29 111 1.8E-24 T 12-10-2018 IPR021242 Protein of unknown function DUF2799 M892_18350 d74f0241f6332b13d64daebeb95f6504 364 SUPERFAMILY SSF48695 14 176 6.68E-47 T 12-10-2018 IPR036280 Multiheme cytochrome superfamily M892_18350 d74f0241f6332b13d64daebeb95f6504 364 PIRSF PIRSF000014 1 364 2.2E-157 T 12-10-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 M892_18350 d74f0241f6332b13d64daebeb95f6504 364 Gene3D G3DSA:1.10.3820.10 3 180 2.7E-35 T 12-10-2018 IPR038266 NapC/NirT cytochrome c superfamily M892_18350 d74f0241f6332b13d64daebeb95f6504 364 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 5 174 1.0E-65 T 12-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal M892_16740 db3d424ff8a3e787094c1b0952be4965 174 SUPERFAMILY SSF55729 2 156 1.45E-25 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_16740 db3d424ff8a3e787094c1b0952be4965 174 Gene3D G3DSA:3.40.630.30 1 170 3.5E-24 T 12-10-2018 M892_16740 db3d424ff8a3e787094c1b0952be4965 174 Pfam PF13302 Acetyltransferase (GNAT) domain 8 146 1.1E-13 T 12-10-2018 IPR000182 GNAT domain M892_20190 d5dec4401b0dd28ac2fdd9cac50a5df9 117 Pfam PF05717 IS66 Orf2 like protein 9 103 1.1E-32 T 12-10-2018 IPR008878 Transposase IS66, Orf2 M892_20030 d5dec4401b0dd28ac2fdd9cac50a5df9 117 Pfam PF05717 IS66 Orf2 like protein 9 103 1.1E-32 T 12-10-2018 IPR008878 Transposase IS66, Orf2 M892_24155 d5dec4401b0dd28ac2fdd9cac50a5df9 117 Pfam PF05717 IS66 Orf2 like protein 9 103 1.1E-32 T 12-10-2018 IPR008878 Transposase IS66, Orf2 M892_04840 d5dec4401b0dd28ac2fdd9cac50a5df9 117 Pfam PF05717 IS66 Orf2 like protein 9 103 1.1E-32 T 12-10-2018 IPR008878 Transposase IS66, Orf2 M892_23170 8e83858965fbde9b7b42de6bb8fe74fc 128 ProDom PD075772 YGBA ECS3588 CYTOPLASMIC UVRA STM2860 AMIDOPHOSPHORIBOSYLTRANSFERASE VVA0912 SO0324 VPA0976 CPE0229 8 101 4.0E-47 T 12-10-2018 IPR020483 Uncharacterised protein family YgbA M892_23170 8e83858965fbde9b7b42de6bb8fe74fc 128 Pfam PF11756 Nitrous oxide-stimulated promoter 8 111 2.0E-47 T 12-10-2018 IPR020483 Uncharacterised protein family YgbA M892_24635 b438d31af186ac89c4ec9384d06216b9 445 TIGRFAM TIGR00797 matE: MATE efflux family protein 22 404 2.4E-46 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M892_24635 b438d31af186ac89c4ec9384d06216b9 445 Pfam PF01554 MatE 241 397 1.3E-17 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M892_24635 b438d31af186ac89c4ec9384d06216b9 445 Pfam PF01554 MatE 22 182 6.8E-21 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M892_24635 b438d31af186ac89c4ec9384d06216b9 445 PIRSF PIRSF006603 1 444 8.5E-83 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M892_13250 75d323762e6142af4bdf61013f920ea5 189 Pfam PF02622 Uncharacterized ACR, COG1678 14 176 5.6E-51 T 12-10-2018 IPR003774 Protein of unknown function UPF0301 M892_13250 75d323762e6142af4bdf61013f920ea5 189 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 3 189 39.372 T 12-10-2018 IPR003774 Protein of unknown function UPF0301 M892_13250 75d323762e6142af4bdf61013f920ea5 189 SUPERFAMILY SSF143456 3 189 1.44E-67 T 12-10-2018 M892_13250 75d323762e6142af4bdf61013f920ea5 189 Gene3D G3DSA:3.40.1740.10 1 189 3.2E-70 T 12-10-2018 M892_24590 393f3b0305ff48a60dfeea237fff80d6 308 SUPERFAMILY SSF103481 205 289 1.57E-11 T 12-10-2018 M892_24590 393f3b0305ff48a60dfeea237fff80d6 308 SUPERFAMILY SSF103481 39 139 5.1E-9 T 12-10-2018 M892_24590 393f3b0305ff48a60dfeea237fff80d6 308 Pfam PF00892 EamA-like transporter family 3 136 1.4E-7 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M892_24590 393f3b0305ff48a60dfeea237fff80d6 308 Pfam PF00892 EamA-like transporter family 150 289 1.1E-12 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M892_08910 458d08d795d335db711856f4c5d0f66e 145 PIRSF PIRSF006276 1 145 3.3E-18 T 12-10-2018 IPR006015 Universal stress protein A M892_08910 458d08d795d335db711856f4c5d0f66e 145 PRINTS PR01438 Universal stress protein signature 102 114 1.1E-10 T 12-10-2018 IPR006015 Universal stress protein A M892_08910 458d08d795d335db711856f4c5d0f66e 145 PRINTS PR01438 Universal stress protein signature 2 20 1.1E-10 T 12-10-2018 IPR006015 Universal stress protein A M892_08910 458d08d795d335db711856f4c5d0f66e 145 PRINTS PR01438 Universal stress protein signature 120 142 1.1E-10 T 12-10-2018 IPR006015 Universal stress protein A M892_08910 458d08d795d335db711856f4c5d0f66e 145 SUPERFAMILY SSF52402 2 143 4.1E-34 T 12-10-2018 M892_08910 458d08d795d335db711856f4c5d0f66e 145 Pfam PF00582 Universal stress protein family 1 142 6.2E-32 T 12-10-2018 IPR006016 UspA M892_08910 458d08d795d335db711856f4c5d0f66e 145 Gene3D G3DSA:3.40.50.620 1 142 5.3E-36 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M892_21450 8573aa1be355219a145e31a7cf88001b 537 SMART SM00990 434 536 2.5E-23 T 12-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 M892_21450 8573aa1be355219a145e31a7cf88001b 537 Pfam PF08774 VRR-NUC domain 430 535 5.2E-23 T 12-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 M892_21450 8573aa1be355219a145e31a7cf88001b 537 Gene3D G3DSA:3.40.1350.10 475 536 2.2E-10 T 12-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 M892_01875 5fedf7cbcf5f216ecdb089597278d524 54 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 2 45 7.5E-21 T 12-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type M892_01875 5fedf7cbcf5f216ecdb089597278d524 54 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 50 7.3E-18 T 12-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type M892_00950 ceb2c66767f83b90bc5c7fe47eabe1e9 574 SMART SM00245 276 492 0.0071 T 12-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 M892_00950 ceb2c66767f83b90bc5c7fe47eabe1e9 574 Gene3D G3DSA:3.90.226.10 290 528 3.2E-69 T 12-10-2018 M892_00950 ceb2c66767f83b90bc5c7fe47eabe1e9 574 SUPERFAMILY SSF50156 194 284 1.33E-7 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 M892_00950 ceb2c66767f83b90bc5c7fe47eabe1e9 574 Gene3D G3DSA:3.30.750.170 135 480 3.2E-69 T 12-10-2018 M892_00950 ceb2c66767f83b90bc5c7fe47eabe1e9 574 SUPERFAMILY SSF52096 182 490 1.42E-28 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily M892_00950 ceb2c66767f83b90bc5c7fe47eabe1e9 574 Pfam PF03572 Peptidase family S41 305 455 1.5E-19 T 12-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 M892_00950 ceb2c66767f83b90bc5c7fe47eabe1e9 574 Gene3D G3DSA:2.30.42.10 184 289 3.2E-69 T 12-10-2018 M892_12555 626e86f552abcfc33b189c6ec648d45d 336 Pfam PF01103 Surface antigen 122 241 1.8E-4 T 12-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 M892_12555 626e86f552abcfc33b189c6ec648d45d 336 Gene3D G3DSA:2.40.160.50 45 334 1.1E-10 T 12-10-2018 M892_25905 1135e289ed65e4809b66fe62eaa79762 158 Pfam PF03382 Mycoplasma protein of unknown function, DUF285 68 154 7.8E-32 T 12-10-2018 IPR005046 Protein of unknown function DUF285 M892_25905 1135e289ed65e4809b66fe62eaa79762 158 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 81 103 6.7E-8 T 12-10-2018 IPR011889 Bacterial surface protein 26-residue repeat M892_21705 70cfbbc6f0f44f9d8c43a7e38070f840 360 SUPERFAMILY SSF103473 4 348 1.31E-51 T 12-10-2018 IPR036259 MFS transporter superfamily M892_21705 70cfbbc6f0f44f9d8c43a7e38070f840 360 Pfam PF07690 Major Facilitator Superfamily 6 306 2.3E-36 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 M892_21705 70cfbbc6f0f44f9d8c43a7e38070f840 360 Gene3D G3DSA:1.20.1720.10 1 346 6.4E-72 T 12-10-2018 M892_11890 833e9e72942a9f5128617deb5797c533 456 PIRSF PIRSF006603 6 451 2.0E-131 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M892_11890 833e9e72942a9f5128617deb5797c533 456 Pfam PF01554 MatE 32 191 2.9E-27 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M892_11890 833e9e72942a9f5128617deb5797c533 456 Pfam PF01554 MatE 255 416 1.9E-20 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M892_11890 833e9e72942a9f5128617deb5797c533 456 TIGRFAM TIGR00797 matE: MATE efflux family protein 32 418 9.9E-57 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M892_02875 070ac683e597a207494e9cfb26acddbf 117 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_02875 070ac683e597a207494e9cfb26acddbf 117 SUPERFAMILY SSF74731 2 116 5.62E-50 T 12-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_02875 070ac683e597a207494e9cfb26acddbf 117 Gene3D G3DSA:1.10.1900.20 56 117 1.0E-28 T 12-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_02875 070ac683e597a207494e9cfb26acddbf 117 Gene3D G3DSA:1.10.720.90 2 55 1.1E-24 T 12-10-2018 M892_02875 070ac683e597a207494e9cfb26acddbf 117 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 30.596 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_02875 070ac683e597a207494e9cfb26acddbf 117 Pfam PF00453 Ribosomal protein L20 3 108 9.9E-49 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_02875 070ac683e597a207494e9cfb26acddbf 117 PRINTS PR00062 Ribosomal protein L20 signature 42 71 4.8E-42 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_02875 070ac683e597a207494e9cfb26acddbf 117 PRINTS PR00062 Ribosomal protein L20 signature 12 41 4.8E-42 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_02875 070ac683e597a207494e9cfb26acddbf 117 PRINTS PR00062 Ribosomal protein L20 signature 75 101 4.8E-42 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_02875 070ac683e597a207494e9cfb26acddbf 117 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 2.5E-52 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_02875 070ac683e597a207494e9cfb26acddbf 117 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 2.0E-22 T 12-10-2018 M892_00280 8bcb14db2427e769f9d707b6d2f99229 817 Pfam PF02687 FtsX-like permease family 715 809 1.3E-7 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 M892_00280 8bcb14db2427e769f9d707b6d2f99229 817 Pfam PF02687 FtsX-like permease family 269 368 5.3E-6 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 M892_27795 b6574eb4712d151b0581d34d16daa9a9 232 Pfam PF00005 ABC transporter 21 169 1.5E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_27795 b6574eb4712d151b0581d34d16daa9a9 232 SUPERFAMILY SSF52540 1 223 3.99E-68 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_27795 b6574eb4712d151b0581d34d16daa9a9 232 Gene3D G3DSA:3.40.50.300 1 229 9.0E-66 T 12-10-2018 M892_27795 b6574eb4712d151b0581d34d16daa9a9 232 SMART SM00382 30 219 9.6E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_27795 b6574eb4712d151b0581d34d16daa9a9 232 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_14815 9363e4e2c3d9e0cb25f004e5aaf622c7 222 SUPERFAMILY SSF158682 81 221 1.03E-26 T 12-10-2018 IPR029024 TerB-like M892_14815 9363e4e2c3d9e0cb25f004e5aaf622c7 222 Gene3D G3DSA:1.10.3680.10 92 222 2.5E-12 T 12-10-2018 IPR029024 TerB-like M892_14815 9363e4e2c3d9e0cb25f004e5aaf622c7 222 Pfam PF04391 Protein of unknown function (DUF533) 43 220 2.4E-62 T 12-10-2018 IPR007486 Inner membrane protein YebE M892_06740 05d3e76d0799a0e8f3c4224a6ff35108 283 SUPERFAMILY SSF51569 2 278 2.29E-104 T 12-10-2018 M892_06740 05d3e76d0799a0e8f3c4224a6ff35108 283 Gene3D G3DSA:3.20.20.70 1 283 5.7E-101 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M892_06740 05d3e76d0799a0e8f3c4224a6ff35108 283 Pfam PF00793 DAHP synthetase I family 10 275 7.3E-70 T 12-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 M892_06740 05d3e76d0799a0e8f3c4224a6ff35108 283 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 18 275 2.2E-116 T 12-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 M892_06740 05d3e76d0799a0e8f3c4224a6ff35108 283 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 277 48.383 T 12-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 M892_10365 ff5eb31c96fbbf582396788d6685a086 131 PRINTS PR00607 Class IE cytochrome C signature 63 74 6.9E-15 T 12-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 M892_10365 ff5eb31c96fbbf582396788d6685a086 131 PRINTS PR00607 Class IE cytochrome C signature 74 84 6.9E-15 T 12-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 M892_10365 ff5eb31c96fbbf582396788d6685a086 131 PRINTS PR00607 Class IE cytochrome C signature 102 114 6.9E-15 T 12-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 M892_10365 ff5eb31c96fbbf582396788d6685a086 131 PRINTS PR00607 Class IE cytochrome C signature 117 128 6.9E-15 T 12-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 M892_10365 ff5eb31c96fbbf582396788d6685a086 131 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 53 127 1.6E-15 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_10365 ff5eb31c96fbbf582396788d6685a086 131 SUPERFAMILY SSF46626 54 128 3.09E-18 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M892_10365 ff5eb31c96fbbf582396788d6685a086 131 Gene3D G3DSA:1.10.760.10 53 130 1.3E-33 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M892_14305 aee92899c6bbefb5571013c0b4c66f5e 210 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 125 197 5.3E-8 T 12-10-2018 IPR031571 Flp pilus assembly protein RcpC/CpaB domain M892_14305 aee92899c6bbefb5571013c0b4c66f5e 210 TIGRFAM TIGR03177 pilus_cpaB: Flp pilus assembly protein CpaB 8 198 8.6E-21 T 12-10-2018 IPR017592 Pilus assembly, Flp-type CpaB M892_08630 c9cc93ee08570c451015779acd27e813 147 Gene3D G3DSA:1.10.1510.10 1 90 5.5E-27 T 12-10-2018 M892_08630 c9cc93ee08570c451015779acd27e813 147 Gene3D G3DSA:1.10.10.410 91 147 1.1E-20 T 12-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal M892_08630 c9cc93ee08570c451015779acd27e813 147 SUPERFAMILY SSF89095 1 146 8.89E-45 T 12-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 M892_08630 c9cc93ee08570c451015779acd27e813 147 Pfam PF09424 Yqey-like protein 5 146 4.9E-57 T 12-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 M892_04865 226885f23df9cfc2226f5f8f83b28370 244 SUPERFAMILY SSF49354 40 150 1.49E-9 T 12-10-2018 IPR008962 PapD-like superfamily M892_04865 226885f23df9cfc2226f5f8f83b28370 244 ProDom PD115044 PRECURSOR SIGNAL 3'REGION PLASMID CS5 37 215 2.0E-15 T 12-10-2018 M892_04865 226885f23df9cfc2226f5f8f83b28370 244 Gene3D G3DSA:2.60.40.10 33 153 5.5E-6 T 12-10-2018 IPR013783 Immunoglobulin-like fold M892_09060 2a24cecda24437670a37c47d49a70185 150 Gene3D G3DSA:3.40.630.30 1 149 2.6E-45 T 12-10-2018 M892_09060 2a24cecda24437670a37c47d49a70185 150 SUPERFAMILY SSF55729 1 148 2.96E-37 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_09060 2a24cecda24437670a37c47d49a70185 150 Pfam PF13673 Acetyltransferase (GNAT) domain 46 148 2.6E-16 T 12-10-2018 IPR000182 GNAT domain M892_06125 bf2e568a92e5c8d5dd6c77844636bf63 87 Gene3D G3DSA:3.30.1070.10 1 84 8.2E-26 T 12-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 M892_06125 bf2e568a92e5c8d5dd6c77844636bf63 87 SUPERFAMILY SSF55229 33 85 1.7E-16 T 12-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 M892_06125 bf2e568a92e5c8d5dd6c77844636bf63 87 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 87 18.728 T 12-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 M892_06125 bf2e568a92e5c8d5dd6c77844636bf63 87 Pfam PF03776 Septum formation topological specificity factor MinE 14 83 3.1E-23 T 12-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 M892_06125 bf2e568a92e5c8d5dd6c77844636bf63 87 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 84 8.9E-34 T 12-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 M892_21575 b9346d9bad11ca23d40b61a71a3f7480 336 SUPERFAMILY SSF56112 45 323 1.2E-27 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily M892_21575 b9346d9bad11ca23d40b61a71a3f7480 336 Gene3D G3DSA:3.90.1200.10 117 321 2.3E-11 T 12-10-2018 M892_21575 b9346d9bad11ca23d40b61a71a3f7480 336 Pfam PF01636 Phosphotransferase enzyme family 44 238 6.0E-15 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase M892_25930 4888d3d61cd6ada5bb13abdd06735bfa 164 SUPERFAMILY SSF55729 1 159 4.4E-15 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_25930 4888d3d61cd6ada5bb13abdd06735bfa 164 Gene3D G3DSA:3.40.630.30 28 142 4.0E-15 T 12-10-2018 M892_25930 4888d3d61cd6ada5bb13abdd06735bfa 164 Pfam PF13302 Acetyltransferase (GNAT) domain 64 142 4.1E-7 T 12-10-2018 IPR000182 GNAT domain M892_13405 34bb78a9307985c09eb299dd24f21ab5 321 Pfam PF03888 MucB/RseB N-terminal domain 26 195 1.4E-58 T 12-10-2018 IPR033434 MucB/RseB, N-terminal M892_13405 34bb78a9307985c09eb299dd24f21ab5 321 Gene3D G3DSA:3.30.200.100 218 317 1.7E-28 T 12-10-2018 IPR038484 MucB/RseB, C-terminal domain superfamily M892_13405 34bb78a9307985c09eb299dd24f21ab5 321 Gene3D G3DSA:2.50.20.10 24 208 5.1E-53 T 12-10-2018 M892_13405 34bb78a9307985c09eb299dd24f21ab5 321 Pfam PF17188 MucB/RseB C-terminal domain 218 311 1.0E-27 T 12-10-2018 IPR033436 MucB/RseB, C-terminal M892_13405 34bb78a9307985c09eb299dd24f21ab5 321 PIRSF PIRSF005427 1 318 1.9E-84 T 12-10-2018 IPR005588 MucB/RseB M892_11755 89502037e19c174434593d35e0df88bb 153 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 109 126 - T 12-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 M892_11755 89502037e19c174434593d35e0df88bb 153 Gene3D G3DSA:2.40.50.100 75 153 3.9E-32 T 12-10-2018 M892_11755 89502037e19c174434593d35e0df88bb 153 Pfam PF00364 Biotin-requiring enzyme 78 152 7.9E-26 T 12-10-2018 IPR000089 Biotin/lipoyl attachment M892_11755 89502037e19c174434593d35e0df88bb 153 SUPERFAMILY SSF51230 78 153 1.03E-26 T 12-10-2018 IPR011053 Single hybrid motif M892_11755 89502037e19c174434593d35e0df88bb 153 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 82 95 9.8E-19 T 12-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 M892_11755 89502037e19c174434593d35e0df88bb 153 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 114 127 9.8E-19 T 12-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 M892_11755 89502037e19c174434593d35e0df88bb 153 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 99 113 9.8E-19 T 12-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 M892_11755 89502037e19c174434593d35e0df88bb 153 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 153 3.5E-62 T 12-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 M892_05320 f4d3bd975ab1ceb66fad30efc9e744aa 221 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 32 217 7.1E-31 T 12-10-2018 IPR018635 Uncharacterised protein family UPF0319 M892_07630 837a3c468d54172293f1e78ba1c68945 127 SUPERFAMILY SSF82649 1 125 7.06E-48 T 12-10-2018 M892_07630 837a3c468d54172293f1e78ba1c68945 127 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 2.4E-69 T 12-10-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 M892_07630 837a3c468d54172293f1e78ba1c68945 127 Pfam PF01592 NifU-like N terminal domain 2 126 1.2E-56 T 12-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 M892_07630 837a3c468d54172293f1e78ba1c68945 127 Gene3D G3DSA:3.90.1010.10 1 127 6.3E-59 T 12-10-2018 M892_05345 eb8708c8698452b121a7cd946c054bfd 54 Pfam PF10689 Protein of unknown function (DUF2496) 8 50 8.4E-24 T 12-10-2018 IPR019630 Protein of unknown function DUF2496, YbaM-related M892_17990 014b78de6dd03d5509a9c9a09ec94972 559 Gene3D G3DSA:3.30.2350.10 347 559 1.6E-58 T 12-10-2018 M892_17990 014b78de6dd03d5509a9c9a09ec94972 559 SUPERFAMILY SSF55120 350 556 2.24E-55 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 M892_17990 014b78de6dd03d5509a9c9a09ec94972 559 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 403 417 - T 12-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 M892_17990 014b78de6dd03d5509a9c9a09ec94972 559 Pfam PF00849 RNA pseudouridylate synthase 365 512 5.5E-28 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 M892_01000 4298865bc9ba3143a8ca10f72b940f6f 230 SUPERFAMILY SSF52096 27 125 1.89E-5 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily M892_27005 8969d5d17cf182bb7c39d0af32a9cec1 338 Pfam PF12680 SnoaL-like domain 11 132 7.2E-10 T 12-10-2018 IPR037401 SnoaL-like domain M892_27005 8969d5d17cf182bb7c39d0af32a9cec1 338 SUPERFAMILY SSF54427 5 153 1.95E-25 T 12-10-2018 IPR032710 NTF2-like domain superfamily M892_27005 8969d5d17cf182bb7c39d0af32a9cec1 338 Gene3D G3DSA:3.10.450.50 5 150 1.6E-22 T 12-10-2018 M892_27005 8969d5d17cf182bb7c39d0af32a9cec1 338 Gene3D G3DSA:3.10.450.50 203 332 1.9E-11 T 12-10-2018 M892_27005 8969d5d17cf182bb7c39d0af32a9cec1 338 SUPERFAMILY SSF54427 185 328 1.55E-16 T 12-10-2018 IPR032710 NTF2-like domain superfamily M892_00860 072e08fcf156d87a265073d785c50669 176 SMART SM00479 5 176 1.5E-5 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III M892_00860 072e08fcf156d87a265073d785c50669 176 SUPERFAMILY SSF53098 4 175 6.16E-30 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_00860 072e08fcf156d87a265073d785c50669 176 Pfam PF00929 Exonuclease 7 171 4.3E-12 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III M892_00860 072e08fcf156d87a265073d785c50669 176 Gene3D G3DSA:3.30.420.10 1 176 1.7E-38 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M892_02085 af40a6478373d8d7ffcefbd58be520c0 272 Pfam PF04116 Fatty acid hydroxylase superfamily 93 229 1.3E-26 T 12-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 M892_16310 1754ab1d2528fdaba171e35c07c36de1 178 Gene3D G3DSA:1.20.1550.10 3 177 3.0E-60 T 12-10-2018 IPR023380 DsbB-like superfamily M892_16310 1754ab1d2528fdaba171e35c07c36de1 178 Pfam PF02600 Disulfide bond formation protein DsbB 14 162 1.1E-43 T 12-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 M892_16310 1754ab1d2528fdaba171e35c07c36de1 178 SUPERFAMILY SSF158442 17 163 1.31E-44 T 12-10-2018 IPR023380 DsbB-like superfamily M892_16310 1754ab1d2528fdaba171e35c07c36de1 178 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 9 170 22.631 T 12-10-2018 IPR022920 Disulphide bond formation protein DsbB M892_03655 e823c2716b53b6bf4be8469b0b0b5eb7 199 Gene3D G3DSA:3.90.79.10 19 195 5.3E-48 T 12-10-2018 M892_03655 e823c2716b53b6bf4be8469b0b0b5eb7 199 Pfam PF00293 NUDIX domain 37 159 2.2E-13 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 M892_03655 e823c2716b53b6bf4be8469b0b0b5eb7 199 SUPERFAMILY SSF55811 37 189 4.47E-35 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 M892_16890 31bd3f3a3f8dbdc3084ebc3773042c64 344 PIRSF PIRSF005632 1 344 3.9E-196 T 12-10-2018 IPR016456 Predicted cobalamin-independent methionine synthase, catalytic subunit M892_16890 31bd3f3a3f8dbdc3084ebc3773042c64 344 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 7 331 5.4E-36 T 12-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 M892_16890 31bd3f3a3f8dbdc3084ebc3773042c64 344 Gene3D G3DSA:3.20.20.210 1 344 2.6E-136 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 M892_16890 31bd3f3a3f8dbdc3084ebc3773042c64 344 SUPERFAMILY SSF51726 4 341 1.02E-69 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 M892_13075 9d7389588881fea3ebc8696adc1f4284 103 SUPERFAMILY SSF46973 2 98 1.22E-33 T 12-10-2018 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily GO:0009401 M892_13075 9d7389588881fea3ebc8696adc1f4284 103 PIRSF PIRSF000699 1 103 9.5E-37 T 12-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 M892_13075 9d7389588881fea3ebc8696adc1f4284 103 Gene3D G3DSA:1.20.58.280 1 101 1.6E-34 T 12-10-2018 M892_13075 9d7389588881fea3ebc8696adc1f4284 103 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 6 97 2.4E-33 T 12-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 M892_13025 74e26e34811757fa7411c3b178de2dcb 356 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 5 354 3.5E-133 T 12-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 M892_13025 74e26e34811757fa7411c3b178de2dcb 356 Pfam PF03739 Predicted permease YjgP/YjgQ family 8 354 4.3E-69 T 12-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 M892_11110 42d1d3aa094a0227a211cc6fae8a4b58 393 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 53 381 3.8E-106 T 12-10-2018 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX M892_17320 1f4265a0cdcea9bcf22f21f361fde556 222 Pfam PF11201 Protein of unknown function (DUF2982) 67 216 8.9E-59 T 12-10-2018 IPR021367 Protein of unknown function DUF2982 M892_13715 146118abadced91de2aa3c5e5b1983f3 64 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 3 59 18.179 T 12-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 M892_13715 146118abadced91de2aa3c5e5b1983f3 64 Pfam PF03884 DNA gyrase inhibitor YacG 7 57 2.7E-23 T 12-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 M892_13715 146118abadced91de2aa3c5e5b1983f3 64 Gene3D G3DSA:3.30.50.10 1 64 6.0E-24 T 12-10-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 Reactome: R-HSA-383280 M892_13715 146118abadced91de2aa3c5e5b1983f3 64 SUPERFAMILY SSF57716 2 62 2.42E-20 T 12-10-2018 M892_21020 13d2ca337ab1768755cedf6995ad16cc 274 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 121 234 2.7E-12 T 12-10-2018 IPR031571 Flp pilus assembly protein RcpC/CpaB domain M892_01340 e0182541888bff3e2e83288ad36467da 164 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 20 155 3.9E-15 T 12-10-2018 IPR009936 Protein of unknown function DUF1468 M892_11815 b2b7074ce4e748cbac5a68958ac7a73b 208 Pfam PF01914 MarC family integral membrane protein 3 204 1.7E-43 T 12-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 M892_11815 b2b7074ce4e748cbac5a68958ac7a73b 208 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 2 202 7.6E-40 T 12-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 M892_22690 b3bd7e105c9116c4b9c622d9fd41782b 200 SUPERFAMILY SSF52266 22 199 1.27E-49 T 12-10-2018 M892_22690 b3bd7e105c9116c4b9c622d9fd41782b 200 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 23 33 - T 12-10-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 M892_22690 b3bd7e105c9116c4b9c622d9fd41782b 200 Gene3D G3DSA:3.40.50.1110 20 200 2.4E-62 T 12-10-2018 IPR036514 SGNH hydrolase superfamily M892_22690 b3bd7e105c9116c4b9c622d9fd41782b 200 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 25 183 7.0E-21 T 12-10-2018 IPR013830 SGNH hydrolase-type esterase domain M892_03225 dbc74c4ba68b2e72383d432f178b7c3d 337 SUPERFAMILY SSF69279 69 174 2.21E-10 T 12-10-2018 M892_03225 dbc74c4ba68b2e72383d432f178b7c3d 337 Pfam PF05954 Phage late control gene D protein (GPD) 120 321 5.8E-6 T 12-10-2018 M892_05070 665016da46d5c2cc63829efc01033a80 173 PRINTS PR01021 OMPA domain signature 73 95 1.7E-16 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M892_05070 665016da46d5c2cc63829efc01033a80 173 PRINTS PR01021 OMPA domain signature 103 118 1.7E-16 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M892_05070 665016da46d5c2cc63829efc01033a80 173 PRINTS PR01021 OMPA domain signature 118 134 1.7E-16 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M892_05070 665016da46d5c2cc63829efc01033a80 173 Pfam PF00691 OmpA family 72 167 2.3E-22 T 12-10-2018 IPR006665 OmpA-like domain M892_05070 665016da46d5c2cc63829efc01033a80 173 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 70 173 1.3E-44 T 12-10-2018 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GO:0009279 M892_05070 665016da46d5c2cc63829efc01033a80 173 SUPERFAMILY SSF103088 57 172 2.49E-33 T 12-10-2018 IPR036737 OmpA-like domain superfamily M892_05070 665016da46d5c2cc63829efc01033a80 173 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 5 173 31.06 T 12-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 M892_05070 665016da46d5c2cc63829efc01033a80 173 Gene3D G3DSA:3.30.1330.60 50 173 1.5E-40 T 12-10-2018 IPR036737 OmpA-like domain superfamily M892_05070 665016da46d5c2cc63829efc01033a80 173 ProSitePatterns PS01068 OmpA-like domain. 105 149 - T 12-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 M892_19420 a1c28344cd9b460cbc3daba3d8d593f5 191 Pfam PF13384 Homeodomain-like domain 28 67 3.6E-8 T 12-10-2018 M892_19420 a1c28344cd9b460cbc3daba3d8d593f5 191 Pfam PF13592 Winged helix-turn helix 99 155 1.4E-19 T 12-10-2018 IPR025959 Winged helix-turn helix domain M892_19420 a1c28344cd9b460cbc3daba3d8d593f5 191 SUPERFAMILY SSF46689 16 131 3.11E-24 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_13375 656bf29c181f8a751682a178f7389842 322 Gene3D G3DSA:2.40.30.160 190 310 8.4E-34 T 12-10-2018 M892_13375 656bf29c181f8a751682a178f7389842 322 SUPERFAMILY SSF101790 237 320 1.18E-18 T 12-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal M892_13375 656bf29c181f8a751682a178f7389842 322 SUPERFAMILY SSF103025 13 236 4.4E-56 T 12-10-2018 M892_13375 656bf29c181f8a751682a178f7389842 322 Pfam PF01571 Aminomethyltransferase folate-binding domain 30 140 9.1E-6 T 12-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain M892_13375 656bf29c181f8a751682a178f7389842 322 Gene3D G3DSA:3.30.70.1630 26 187 2.2E-41 T 12-10-2018 M892_13375 656bf29c181f8a751682a178f7389842 322 Hamap MF_01175 tRNA-modifying protein YgfZ [ygfZ]. 1 316 43.233 T 12-10-2018 IPR023758 tRNA-modifying protein YgfZ GO:0005542|GO:0009451 M892_13375 656bf29c181f8a751682a178f7389842 322 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 181 245 1.0E-25 T 12-10-2018 IPR017703 YgfZ/GcvT conserved site M892_13375 656bf29c181f8a751682a178f7389842 322 Gene3D G3DSA:3.30.70.1400 29 115 2.2E-41 T 12-10-2018 M892_13375 656bf29c181f8a751682a178f7389842 322 PIRSF PIRSF006487 159 287 0.33 T 12-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 M892_13375 656bf29c181f8a751682a178f7389842 322 PIRSF PIRSF006487 20 153 3.4E-5 T 12-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 M892_04810 6804dad60c1dc2b47ae4a398625d3bef 162 Pfam PF01610 Transposase 46 160 4.5E-28 T 12-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain M892_16835 3d7f3b7a580db5b4bc55288d8f53110c 147 Pfam PF01548 Transposase 12 141 9.2E-15 T 12-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 M892_18635 3d7f3b7a580db5b4bc55288d8f53110c 147 Pfam PF01548 Transposase 12 141 9.2E-15 T 12-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 M892_19470 aedf7214ef8cf54eb4bf4df4e7f8f505 170 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 158 169 - T 12-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 M892_19470 aedf7214ef8cf54eb4bf4df4e7f8f505 170 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 32 169 2.0E-30 T 12-10-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 M892_19470 aedf7214ef8cf54eb4bf4df4e7f8f505 170 ProSitePatterns PS00087 Copper/Zinc superoxide dismutase signature 1. 62 72 - T 12-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 M892_19470 aedf7214ef8cf54eb4bf4df4e7f8f505 170 Gene3D G3DSA:2.60.40.200 20 170 1.9E-46 T 12-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 M892_19470 aedf7214ef8cf54eb4bf4df4e7f8f505 170 SUPERFAMILY SSF49329 25 170 2.23E-49 T 12-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 M892_15140 9a121aa7cb0c9ea3426bfd880155a289 67 Pfam PF11446 Protein of unknown function (DUF2897) 5 54 3.6E-21 T 12-10-2018 IPR021550 Protein of unknown function DUF2897 M892_20820 52cc714d6e048b4dea02c41da8409b28 238 Pfam PF01609 Transposase DDE domain 92 190 1.7E-6 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_20820 52cc714d6e048b4dea02c41da8409b28 238 SUPERFAMILY SSF53098 2 206 4.63E-24 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_18100 5a034e9709461ba65332794182298fa0 310 Gene3D G3DSA:2.10.10.20 267 310 2.8E-19 T 12-10-2018 M892_18100 5a034e9709461ba65332794182298fa0 310 SUPERFAMILY SSF51055 261 307 8.24E-14 T 12-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 M892_18100 5a034e9709461ba65332794182298fa0 310 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 4 132 1.7E-29 T 12-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal M892_18100 5a034e9709461ba65332794182298fa0 310 SMART SM00495 267 310 9.0E-8 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 M892_18100 5a034e9709461ba65332794182298fa0 310 SUPERFAMILY SSF81296 6 135 4.06E-40 T 12-10-2018 IPR014756 Immunoglobulin E-set M892_18100 5a034e9709461ba65332794182298fa0 310 Gene3D G3DSA:2.70.50.50 1 137 3.5E-47 T 12-10-2018 M892_16240 f4888fb70aca5afb8aabece588fb0a79 302 SUPERFAMILY SSF161098 99 283 2.35E-27 T 12-10-2018 IPR035906 MetI-like superfamily M892_16240 f4888fb70aca5afb8aabece588fb0a79 302 Gene3D G3DSA:1.10.3720.10 98 298 4.9E-21 T 12-10-2018 IPR035906 MetI-like superfamily M892_16240 f4888fb70aca5afb8aabece588fb0a79 302 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 26 71 2.2E-15 T 12-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain M892_16240 f4888fb70aca5afb8aabece588fb0a79 302 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 120 300 4.7E-27 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M892_06365 32f25afb66c341197e6b1fdbd3474d64 166 Gene3D G3DSA:3.30.70.940 1 165 1.8E-52 T 12-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 M892_06365 32f25afb66c341197e6b1fdbd3474d64 166 Hamap MF_00951 Transcription antitermination protein RfaH [rfaH]. 1 166 46.399 T 12-10-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 M892_06365 32f25afb66c341197e6b1fdbd3474d64 166 TIGRFAM TIGR01955 RfaH: transcription elongation factor/antiterminator RfaH 4 163 7.4E-62 T 12-10-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 M892_06365 32f25afb66c341197e6b1fdbd3474d64 166 SMART SM00738 1 101 2.6E-27 T 12-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 M892_06365 32f25afb66c341197e6b1fdbd3474d64 166 SUPERFAMILY SSF82679 1 100 2.75E-28 T 12-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 M892_06365 32f25afb66c341197e6b1fdbd3474d64 166 SUPERFAMILY SSF50104 113 163 2.26E-6 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily M892_06365 32f25afb66c341197e6b1fdbd3474d64 166 Pfam PF02357 Transcription termination factor nusG 2 94 5.8E-20 T 12-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 M892_00720 200729488b69d822c4a961cfb783bfa7 159 Pfam PF13673 Acetyltransferase (GNAT) domain 28 150 4.7E-20 T 12-10-2018 IPR000182 GNAT domain M892_00720 200729488b69d822c4a961cfb783bfa7 159 SUPERFAMILY SSF55729 1 154 1.35E-36 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_00720 200729488b69d822c4a961cfb783bfa7 159 Gene3D G3DSA:3.40.630.30 1 159 5.1E-42 T 12-10-2018 M892_06925 0508bd18eed7624bd89a41edf023d822 200 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 11 187 6.6E-34 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT M892_01345 b962576297bc3bb3fcbae4b6bd96f486 325 Gene3D G3DSA:3.40.190.150 30 314 3.5E-59 T 12-10-2018 M892_01345 b962576297bc3bb3fcbae4b6bd96f486 325 Gene3D G3DSA:3.40.190.10 123 249 3.5E-59 T 12-10-2018 M892_01345 b962576297bc3bb3fcbae4b6bd96f486 325 PIRSF PIRSF017082 1 324 2.7E-85 T 12-10-2018 IPR005064 Bordetella uptake gene GO:0030288 M892_01345 b962576297bc3bb3fcbae4b6bd96f486 325 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 66 320 2.1E-26 T 12-10-2018 IPR005064 Bordetella uptake gene GO:0030288 M892_01345 b962576297bc3bb3fcbae4b6bd96f486 325 SUPERFAMILY SSF53850 104 289 1.81E-9 T 12-10-2018 M892_26600 d75c9cad991700943668f6591e7f10a5 228 Pfam PF13861 FlgD Tudor-like domain 95 224 1.3E-11 T 12-10-2018 IPR025963 FlgD Tudor-like domain M892_26600 d75c9cad991700943668f6591e7f10a5 228 Gene3D G3DSA:2.60.40.4070 112 191 2.1E-17 T 12-10-2018 M892_26600 d75c9cad991700943668f6591e7f10a5 228 Gene3D G3DSA:2.30.30.910 101 223 2.1E-17 T 12-10-2018 M892_26600 d75c9cad991700943668f6591e7f10a5 228 Pfam PF13860 FlgD Ig-like domain 113 183 1.0E-9 T 12-10-2018 IPR025965 FlgD Ig-like domain M892_26600 d75c9cad991700943668f6591e7f10a5 228 Pfam PF03963 Flagellar hook capping protein - N-terminal region 25 85 3.1E-18 T 12-10-2018 IPR005648 Flagellar hook capping protein M892_21125 38493992833e49180ceb36ad0c61a943 394 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_21125 38493992833e49180ceb36ad0c61a943 394 SMART SM00382 52 253 7.3E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_21125 38493992833e49180ceb36ad0c61a943 394 SUPERFAMILY SSF54631 272 389 7.2E-7 T 12-10-2018 M892_21125 38493992833e49180ceb36ad0c61a943 394 Gene3D G3DSA:3.40.50.300 34 266 6.1E-62 T 12-10-2018 M892_21125 38493992833e49180ceb36ad0c61a943 394 TIGRFAM TIGR03415 ABC_choXWV_ATP: choline ABC transporter, ATP-binding protein 4 386 4.7E-182 T 12-10-2018 IPR022473 ABC transporter, Choline, ATP-binding subunit GO:0015220|GO:0015871|GO:0055052 M892_21125 38493992833e49180ceb36ad0c61a943 394 SUPERFAMILY SSF52540 42 273 1.35E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_21125 38493992833e49180ceb36ad0c61a943 394 Gene3D G3DSA:3.10.580.10 267 388 3.0E-6 T 12-10-2018 M892_21125 38493992833e49180ceb36ad0c61a943 394 Pfam PF00005 ABC transporter 44 195 2.3E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_03835 d6a4b1a1e9814d0e58322a627c2bfb83 320 Gene3D G3DSA:1.10.3720.10 70 308 6.3E-24 T 12-10-2018 IPR035906 MetI-like superfamily M892_03835 d6a4b1a1e9814d0e58322a627c2bfb83 320 SUPERFAMILY SSF161098 69 298 4.09E-20 T 12-10-2018 IPR035906 MetI-like superfamily M892_03835 d6a4b1a1e9814d0e58322a627c2bfb83 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 314 1.0E-43 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M892_19785 097b53705f4313591926e51598805c61 695 Gene3D G3DSA:3.30.479.30 85 191 2.5E-9 T 12-10-2018 M892_19785 097b53705f4313591926e51598805c61 695 SUPERFAMILY SSF117892 56 190 1.24E-10 T 12-10-2018 IPR036013 Band 7/SPFH domain superfamily M892_23850 87c2bec1c90d3ebe73440b14ef6e3643 323 Gene3D G3DSA:3.10.520.20 1 312 5.3E-96 T 12-10-2018 M892_23850 87c2bec1c90d3ebe73440b14ef6e3643 323 PIRSF PIRSF006268 1 311 2.6E-93 T 12-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 M892_23850 87c2bec1c90d3ebe73440b14ef6e3643 323 Pfam PF02424 ApbE family 13 292 7.7E-71 T 12-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 M892_23850 87c2bec1c90d3ebe73440b14ef6e3643 323 SUPERFAMILY SSF143631 6 308 3.14E-88 T 12-10-2018 IPR003374 ApbE-like superfamily M892_25955 18742ab49fbb2809fdb0c6079e90fe52 232 SUPERFAMILY SSF69255 20 112 2.35E-10 T 12-10-2018 M892_25955 18742ab49fbb2809fdb0c6079e90fe52 232 SUPERFAMILY SSF69349 104 189 5.41E-6 T 12-10-2018 M892_23465 728d878da6eeb6c863de1f5994134866 184 Pfam PF13302 Acetyltransferase (GNAT) domain 16 155 1.2E-11 T 12-10-2018 IPR000182 GNAT domain M892_23465 728d878da6eeb6c863de1f5994134866 184 SUPERFAMILY SSF55729 14 157 6.67E-23 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_23465 728d878da6eeb6c863de1f5994134866 184 Gene3D G3DSA:3.40.630.30 2 171 1.1E-27 T 12-10-2018 M892_26460 80cfd0c2341b80686e445749a9855cf2 89 TIGRFAM TIGR02450 TIGR02450: tryptophan-rich conserved hypothetical protein 28 89 7.2E-23 T 12-10-2018 IPR012663 Conserved hypothetical protein CHP02450, tryptophan-rich M892_26460 80cfd0c2341b80686e445749a9855cf2 89 Pfam PF09493 Tryptophan-rich protein (DUF2389) 30 89 8.4E-22 T 12-10-2018 IPR012663 Conserved hypothetical protein CHP02450, tryptophan-rich M892_19190 8c42a7f0d84c2d461c831315ce2c6c98 150 Pfam PF13279 Thioesterase-like superfamily 16 134 2.6E-19 T 12-10-2018 M892_19190 8c42a7f0d84c2d461c831315ce2c6c98 150 SUPERFAMILY SSF54637 5 137 1.18E-33 T 12-10-2018 IPR029069 HotDog domain superfamily M892_19190 8c42a7f0d84c2d461c831315ce2c6c98 150 Gene3D G3DSA:3.10.129.10 2 138 1.7E-37 T 12-10-2018 M892_03495 a5aace6297dcdb3ef73c068ba48d9e95 76 Pfam PF06806 Putative excisionase (DUF1233) 6 69 2.9E-13 T 12-10-2018 IPR009634 Putative excisionase M892_03495 a5aace6297dcdb3ef73c068ba48d9e95 76 Gene3D G3DSA:1.10.1660.60 6 75 3.1E-20 T 12-10-2018 IPR038146 Bacteriophage 933W-like, putative excisionase superfamily M892_12915 57871f513160505b49b0192e61a567d1 165 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 4 152 2.2E-54 T 12-10-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 M892_12915 57871f513160505b49b0192e61a567d1 165 Pfam PF02470 MlaD protein 40 118 3.7E-20 T 12-10-2018 IPR003399 Mce/MlaD M892_24500 893d2ebc3f199d876f32210636230a3f 192 PIRSF PIRSF000013 1 192 6.7E-90 T 12-10-2018 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 M892_24500 893d2ebc3f199d876f32210636230a3f 192 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 15 185 4.9E-70 T 12-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal M892_24500 893d2ebc3f199d876f32210636230a3f 192 Gene3D G3DSA:1.10.3820.10 11 188 2.2E-32 T 12-10-2018 IPR038266 NapC/NirT cytochrome c superfamily M892_24500 893d2ebc3f199d876f32210636230a3f 192 SUPERFAMILY SSF48695 16 191 1.18E-54 T 12-10-2018 IPR036280 Multiheme cytochrome superfamily M892_25380 3a1b6917a60695b84580fc475efd78a9 310 Pfam PF03747 ADP-ribosylglycohydrolase 11 285 1.2E-48 T 12-10-2018 IPR005502 ADP-ribosylation/Crystallin J1 M892_25380 3a1b6917a60695b84580fc475efd78a9 310 Gene3D G3DSA:1.10.4080.10 3 309 4.7E-32 T 12-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily M892_25380 3a1b6917a60695b84580fc475efd78a9 310 SUPERFAMILY SSF101478 4 301 1.44E-39 T 12-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily M892_05850 02c96998bdb75cf48506f834d909ab7c 290 SMART SM00978 159 290 5.7E-36 T 12-10-2018 IPR007379 Tim44-like domain M892_05850 02c96998bdb75cf48506f834d909ab7c 290 Pfam PF07466 Protein of unknown function (DUF1517) 28 124 8.0E-6 T 12-10-2018 IPR010903 Protein of unknown function DUF1517 M892_05850 02c96998bdb75cf48506f834d909ab7c 290 Pfam PF04280 Tim44-like domain 168 289 1.6E-13 T 12-10-2018 IPR007379 Tim44-like domain M892_05850 02c96998bdb75cf48506f834d909ab7c 290 SUPERFAMILY SSF54427 169 289 2.89E-15 T 12-10-2018 IPR032710 NTF2-like domain superfamily M892_01940 f7c0aaac7b64d470b80b02ed8b52724b 243 Gene3D G3DSA:3.30.1600.10 22 158 1.9E-80 T 12-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily M892_01940 f7c0aaac7b64d470b80b02ed8b52724b 243 SUPERFAMILY SSF52467 6 234 8.91E-73 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily M892_01940 f7c0aaac7b64d470b80b02ed8b52724b 243 Pfam PF02146 Sir2 family 13 186 2.4E-50 T 12-10-2018 IPR003000 Sirtuin family GO:0070403 M892_01940 f7c0aaac7b64d470b80b02ed8b52724b 243 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 6 236 55.084 T 12-10-2018 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 Reactome: R-HSA-2151201 M892_01940 f7c0aaac7b64d470b80b02ed8b52724b 243 Gene3D G3DSA:3.40.50.1220 8 224 1.9E-80 T 12-10-2018 M892_20060 5f9f315114b1fede0fa16174fb4b316a 175 Pfam PF00583 Acetyltransferase (GNAT) family 45 138 2.7E-11 T 12-10-2018 IPR000182 GNAT domain M892_20060 5f9f315114b1fede0fa16174fb4b316a 175 Gene3D G3DSA:3.40.630.30 1 157 3.2E-21 T 12-10-2018 M892_20060 5f9f315114b1fede0fa16174fb4b316a 175 SUPERFAMILY SSF55729 1 149 3.95E-23 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_16480 8d6347aae2e8173810c41b6139c14b06 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 84 110 2.8E-34 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 M892_16480 8d6347aae2e8173810c41b6139c14b06 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 40 59 2.8E-34 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 M892_16480 8d6347aae2e8173810c41b6139c14b06 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 311 330 2.8E-34 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 M892_16480 8d6347aae2e8173810c41b6139c14b06 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 429 449 2.8E-34 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 M892_16480 8d6347aae2e8173810c41b6139c14b06 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 257 277 2.8E-34 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 M892_16480 8d6347aae2e8173810c41b6139c14b06 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 11 32 2.8E-34 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 M892_16480 8d6347aae2e8173810c41b6139c14b06 486 SUPERFAMILY SSF161070 3 474 9.02E-147 T 12-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 M892_16480 8d6347aae2e8173810c41b6139c14b06 486 Pfam PF00209 Sodium:neurotransmitter symporter family 121 469 6.4E-77 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 M892_16480 8d6347aae2e8173810c41b6139c14b06 486 Pfam PF00209 Sodium:neurotransmitter symporter family 3 120 1.3E-39 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 M892_16480 8d6347aae2e8173810c41b6139c14b06 486 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 27 41 - T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 M892_07030 e62024b4d1d77c889450c89b589e35d2 207 Gene3D G3DSA:3.40.50.1820 13 190 1.3E-29 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_07030 e62024b4d1d77c889450c89b589e35d2 207 SUPERFAMILY SSF53474 3 177 1.51E-27 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_07030 e62024b4d1d77c889450c89b589e35d2 207 Pfam PF12697 Alpha/beta hydrolase family 15 116 7.7E-6 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 M892_13340 f544a1b7811feaa429392f85fba22d96 197 SUPERFAMILY SSF100950 5 195 1.33E-56 T 12-10-2018 IPR037171 NagB/RpiA transferase-like M892_13340 f544a1b7811feaa429392f85fba22d96 197 Gene3D G3DSA:3.40.50.10420 2 196 1.3E-55 T 12-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily M892_13340 f544a1b7811feaa429392f85fba22d96 197 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 6 189 2.0E-43 T 12-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase M892_13340 f544a1b7811feaa429392f85fba22d96 197 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 6 189 7.5E-51 T 12-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase M892_13340 f544a1b7811feaa429392f85fba22d96 197 PIRSF PIRSF006806 3 192 1.5E-34 T 12-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase M892_26975 73078e6ab5ad6ce49fbc601d347546da 269 Pfam PF07148 Maltose operon periplasmic protein precursor (MalM) 67 200 8.9E-40 T 12-10-2018 IPR010794 Maltose operon periplasmic GO:0008643|GO:0042597 M892_04540 a472c6167ce17c0ddb2ca9c7b37a1c59 88 TIGRFAM TIGR01403 fliQ_rel_III: type III secretion protein, HrpO family 5 84 1.6E-31 T 12-10-2018 IPR006306 Type III secretion protein HrpO GO:0009306|GO:0016021 M892_04540 a472c6167ce17c0ddb2ca9c7b37a1c59 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 7.3E-25 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 M892_04540 a472c6167ce17c0ddb2ca9c7b37a1c59 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 7.3E-25 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 M892_04540 a472c6167ce17c0ddb2ca9c7b37a1c59 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 7.3E-25 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 M892_04540 a472c6167ce17c0ddb2ca9c7b37a1c59 88 PIRSF PIRSF004669 1 88 3.2E-25 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 M892_04540 a472c6167ce17c0ddb2ca9c7b37a1c59 88 Pfam PF01313 Bacterial export proteins, family 3 6 77 3.3E-24 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 M892_19145 a841d906bb41879e3a0f53b3a32715e0 166 Pfam PF02469 Fasciclin domain 43 165 4.5E-38 T 12-10-2018 IPR000782 FAS1 domain M892_19145 a841d906bb41879e3a0f53b3a32715e0 166 Gene3D G3DSA:2.30.180.10 11 166 9.2E-52 T 12-10-2018 IPR036378 FAS1 domain superfamily M892_19145 a841d906bb41879e3a0f53b3a32715e0 166 SMART SM00554 67 166 2.0E-34 T 12-10-2018 IPR000782 FAS1 domain M892_19145 a841d906bb41879e3a0f53b3a32715e0 166 SUPERFAMILY SSF82153 33 165 3.92E-44 T 12-10-2018 IPR036378 FAS1 domain superfamily M892_02310 fc9791a0c5a870a5cd19ae416e0f5921 204 SMART SM01266 4 58 6.5E-13 T 12-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 M892_02310 fc9791a0c5a870a5cd19ae416e0f5921 204 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 138 166 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 M892_02310 fc9791a0c5a870a5cd19ae416e0f5921 204 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 130 164 1.0E-11 T 12-10-2018 IPR001451 Hexapeptide repeat M892_02310 fc9791a0c5a870a5cd19ae416e0f5921 204 Pfam PF12464 Maltose acetyltransferase 10 57 1.7E-8 T 12-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 M892_02310 fc9791a0c5a870a5cd19ae416e0f5921 204 SUPERFAMILY SSF51161 5 195 2.08E-53 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily M892_02310 fc9791a0c5a870a5cd19ae416e0f5921 204 Gene3D G3DSA:2.160.10.10 1 201 1.0E-65 T 12-10-2018 M892_05490 7fe44c9f917b434a3af678b64cd2c31e 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 290 312 4.2E-13 T 12-10-2018 M892_05490 7fe44c9f917b434a3af678b64cd2c31e 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 129 4.2E-13 T 12-10-2018 M892_05490 7fe44c9f917b434a3af678b64cd2c31e 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 167 185 4.2E-13 T 12-10-2018 M892_05490 7fe44c9f917b434a3af678b64cd2c31e 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 4.2E-13 T 12-10-2018 M892_05490 7fe44c9f917b434a3af678b64cd2c31e 429 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 333 4.9E-62 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 M892_05490 7fe44c9f917b434a3af678b64cd2c31e 429 SUPERFAMILY SSF51905 3 347 3.67E-28 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_05490 7fe44c9f917b434a3af678b64cd2c31e 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 305 312 4.2E-7 T 12-10-2018 M892_05490 7fe44c9f917b434a3af678b64cd2c31e 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 167 192 4.2E-7 T 12-10-2018 M892_05490 7fe44c9f917b434a3af678b64cd2c31e 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 4.2E-7 T 12-10-2018 M892_05490 7fe44c9f917b434a3af678b64cd2c31e 429 Gene3D G3DSA:3.50.50.100 1 406 9.3E-114 T 12-10-2018 M892_05305 a30b7480012cf19f2742f30adbb69d82 72 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 6.0E-28 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 M892_05305 a30b7480012cf19f2742f30adbb69d82 72 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 12-10-2018 IPR019844 Cold-shock conserved site M892_05305 a30b7480012cf19f2742f30adbb69d82 72 PRINTS PR00050 Cold shock protein signature 40 58 8.3E-15 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 M892_05305 a30b7480012cf19f2742f30adbb69d82 72 PRINTS PR00050 Cold shock protein signature 4 19 8.3E-15 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 M892_05305 a30b7480012cf19f2742f30adbb69d82 72 PRINTS PR00050 Cold shock protein signature 25 34 8.3E-15 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 M892_05305 a30b7480012cf19f2742f30adbb69d82 72 SMART SM00357 3 67 2.9E-24 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 M892_05305 a30b7480012cf19f2742f30adbb69d82 72 SUPERFAMILY SSF50249 1 67 9.64E-23 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M892_05305 a30b7480012cf19f2742f30adbb69d82 72 PIRSF PIRSF002599 1 71 6.1E-23 T 12-10-2018 IPR012156 Cold shock, CspA GO:0003676 M892_05305 a30b7480012cf19f2742f30adbb69d82 72 Gene3D G3DSA:2.40.50.140 2 65 9.5E-26 T 12-10-2018 M892_05305 a30b7480012cf19f2742f30adbb69d82 72 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 1 68 1.6E-41 T 12-10-2018 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355 M892_07405 aa79d64454cfb65e3083460d3442d2e6 191 Pfam PF09335 SNARE associated Golgi protein 29 149 3.1E-21 T 12-10-2018 IPR032816 SNARE associated Golgi protein M892_21350 944a7875e1f9072f25b0973a19f586c3 151 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 12 131 32.688 T 12-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 M892_21350 944a7875e1f9072f25b0973a19f586c3 151 SUPERFAMILY SSF52335 3 150 1.01E-57 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily M892_21350 944a7875e1f9072f25b0973a19f586c3 151 SMART SM00851 25 118 1.8E-22 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain M892_21350 944a7875e1f9072f25b0973a19f586c3 151 Gene3D G3DSA:3.40.50.1380 1 151 1.4E-65 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily M892_21350 944a7875e1f9072f25b0973a19f586c3 151 PIRSF PIRSF006614 8 151 1.2E-63 T 12-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 M892_21350 944a7875e1f9072f25b0973a19f586c3 151 ProSitePatterns PS01335 Methylglyoxal synthase active site. 65 73 - T 12-10-2018 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 M892_21350 944a7875e1f9072f25b0973a19f586c3 151 Pfam PF02142 MGS-like domain 25 118 3.4E-18 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain M892_21350 944a7875e1f9072f25b0973a19f586c3 151 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 11 150 1.2E-64 T 12-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 M892_19455 859e9490ee0ab30c439243cf3346f12e 118 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 112 8.8E-6 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain M892_19455 859e9490ee0ab30c439243cf3346f12e 118 SUPERFAMILY SSF54593 3 116 3.16E-20 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M892_19455 859e9490ee0ab30c439243cf3346f12e 118 Gene3D G3DSA:3.10.180.10 1 117 1.2E-18 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M892_11370 ea56627abbeb621cdae45bd41f618fee 121 Pfam PF07226 Protein of unknown function (DUF1422) 5 115 1.6E-50 T 12-10-2018 IPR009867 Protein of unknown function DUF1422 M892_11370 ea56627abbeb621cdae45bd41f618fee 121 ProDom PD076479 MEMBRANE INNER YIJD TRANSMEMBRANE Y0323 AAA SIMILAR A ACETYL-COENZYME VV0128 1 111 2.0E-58 T 12-10-2018 IPR009867 Protein of unknown function DUF1422 M892_15620 603277e61ef8568528e92af4abf8a317 199 SMART SM00493 81 166 7.3E-17 T 12-10-2018 IPR006171 TOPRIM domain M892_15620 603277e61ef8568528e92af4abf8a317 199 Gene3D G3DSA:1.10.8.420 1 53 3.5E-19 T 12-10-2018 M892_15620 603277e61ef8568528e92af4abf8a317 199 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 102.446 T 12-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 M892_15620 603277e61ef8568528e92af4abf8a317 199 Pfam PF02132 RecR protein 41 77 2.1E-15 T 12-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger M892_15620 603277e61ef8568528e92af4abf8a317 199 Pfam PF13662 Toprim domain 82 172 3.7E-23 T 12-10-2018 IPR006171 TOPRIM domain M892_15620 603277e61ef8568528e92af4abf8a317 199 Gene3D G3DSA:3.40.1360.10 78 199 4.7E-39 T 12-10-2018 M892_15620 603277e61ef8568528e92af4abf8a317 199 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 12-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 M892_15620 603277e61ef8568528e92af4abf8a317 199 TIGRFAM TIGR00615 recR: recombination protein RecR 3 197 1.3E-78 T 12-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 M892_15620 603277e61ef8568528e92af4abf8a317 199 SUPERFAMILY SSF111304 2 199 2.35E-72 T 12-10-2018 IPR023627 Recombination protein RecR M892_21240 9bd29c921f3d2d92f845b56c994b77ec 139 Pfam PF05025 RbsD / FucU transport protein family 1 138 8.6E-47 T 12-10-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 M892_21240 9bd29c921f3d2d92f845b56c994b77ec 139 Hamap MF_01661 D-ribose pyranase [rbsD]. 1 139 32.933 T 12-10-2018 IPR023064 D-ribose pyranase GO:0016872 M892_21240 9bd29c921f3d2d92f845b56c994b77ec 139 Gene3D G3DSA:3.40.1650.10 8 135 6.0E-35 T 12-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 M892_21240 9bd29c921f3d2d92f845b56c994b77ec 139 SUPERFAMILY SSF102546 1 139 1.28E-42 T 12-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 M892_19245 c9017b3dcfae8f6d66a73397d1a9eaa0 292 SUPERFAMILY SSF55620 3 154 4.23E-31 T 12-10-2018 M892_19245 c9017b3dcfae8f6d66a73397d1a9eaa0 292 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 149 283 2.1E-7 T 12-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 M892_19245 c9017b3dcfae8f6d66a73397d1a9eaa0 292 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 24 132 1.1E-8 T 12-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 M892_19245 c9017b3dcfae8f6d66a73397d1a9eaa0 292 Gene3D G3DSA:3.30.479.10 151 291 1.3E-5 T 12-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 M892_19245 c9017b3dcfae8f6d66a73397d1a9eaa0 292 Gene3D G3DSA:3.30.479.10 13 150 5.5E-24 T 12-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 M892_19245 c9017b3dcfae8f6d66a73397d1a9eaa0 292 SUPERFAMILY SSF55620 152 291 5.56E-23 T 12-10-2018 M892_02900 1655cdc16ef170d36b7cbdd97ade593b 247 Pfam PF07070 SpoOM protein 2 215 2.8E-63 T 12-10-2018 IPR009776 Sporulation stage 0, protein M M892_27710 d170250455db5931ad0da794102acb6b 405 Gene3D G3DSA:1.10.1660.30 36 102 3.9E-6 T 12-10-2018 M892_27710 d170250455db5931ad0da794102acb6b 405 SUPERFAMILY SSF52540 108 366 1.2E-32 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_27710 d170250455db5931ad0da794102acb6b 405 Pfam PF13614 AAA domain 110 295 2.0E-22 T 12-10-2018 IPR025669 AAA domain M892_27710 d170250455db5931ad0da794102acb6b 405 Gene3D G3DSA:3.40.50.300 107 397 4.4E-56 T 12-10-2018 M892_23475 1c42cf7e4cea6b730fa6efe621c1d157 299 SUPERFAMILY SSF103481 47 145 6.93E-18 T 12-10-2018 M892_23475 1c42cf7e4cea6b730fa6efe621c1d157 299 SUPERFAMILY SSF103481 192 290 2.88E-14 T 12-10-2018 M892_23475 1c42cf7e4cea6b730fa6efe621c1d157 299 Pfam PF00892 EamA-like transporter family 11 142 2.0E-15 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M892_23475 1c42cf7e4cea6b730fa6efe621c1d157 299 Pfam PF00892 EamA-like transporter family 157 287 4.2E-10 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M892_19740 81953c23b363d1f52c8c22fbc4949e53 495 SMART SM00052 227 474 1.1E-76 T 12-10-2018 IPR001633 EAL domain M892_19740 81953c23b363d1f52c8c22fbc4949e53 495 Gene3D G3DSA:3.20.20.450 228 489 1.7E-73 T 12-10-2018 IPR035919 EAL domain superfamily M892_19740 81953c23b363d1f52c8c22fbc4949e53 495 Pfam PF12792 CSS motif domain associated with EAL 9 202 8.8E-8 T 12-10-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain M892_19740 81953c23b363d1f52c8c22fbc4949e53 495 Pfam PF00563 EAL domain 235 469 5.1E-64 T 12-10-2018 IPR001633 EAL domain M892_19740 81953c23b363d1f52c8c22fbc4949e53 495 SUPERFAMILY SSF141868 235 480 8.89E-72 T 12-10-2018 IPR035919 EAL domain superfamily M892_03960 0ddf6ce3bdfb92ef222b5a5ee6366066 197 SUPERFAMILY SSF56672 14 191 1.45E-27 T 12-10-2018 M892_03960 0ddf6ce3bdfb92ef222b5a5ee6366066 197 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 66 192 7.6E-22 T 12-10-2018 IPR000477 Reverse transcriptase domain M892_20665 fecbf1c403f84e8a4e07f705fa51a91c 204 Gene3D G3DSA:3.90.850.10 7 201 3.1E-45 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 M892_20665 fecbf1c403f84e8a4e07f705fa51a91c 204 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 15 186 3.9E-26 T 12-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 M892_20665 fecbf1c403f84e8a4e07f705fa51a91c 204 SUPERFAMILY SSF56529 11 187 1.31E-45 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 M892_27110 62ef77af8f94eafa7c2445c3a8a55a27 628 Pfam PF02743 Cache domain 46 257 4.5E-23 T 12-10-2018 IPR033479 Double Cache domain 1 M892_27110 62ef77af8f94eafa7c2445c3a8a55a27 628 Pfam PF00672 HAMP domain 300 347 2.6E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M892_27110 62ef77af8f94eafa7c2445c3a8a55a27 628 SMART SM00283 365 626 2.3E-73 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M892_27110 62ef77af8f94eafa7c2445c3a8a55a27 628 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 431 594 8.1E-40 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M892_27110 62ef77af8f94eafa7c2445c3a8a55a27 628 Gene3D G3DSA:3.30.450.20 53 269 3.7E-28 T 12-10-2018 M892_27110 62ef77af8f94eafa7c2445c3a8a55a27 628 SMART SM00304 385 452 94.0 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M892_27110 62ef77af8f94eafa7c2445c3a8a55a27 628 SMART SM00304 296 350 7.0E-12 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M892_27110 62ef77af8f94eafa7c2445c3a8a55a27 628 Gene3D G3DSA:3.30.450.20 66 171 3.7E-28 T 12-10-2018 M892_27110 62ef77af8f94eafa7c2445c3a8a55a27 628 Gene3D G3DSA:1.10.287.950 296 628 2.7E-75 T 12-10-2018 M892_27110 62ef77af8f94eafa7c2445c3a8a55a27 628 SUPERFAMILY SSF58104 318 627 9.42E-78 T 12-10-2018 M892_17205 3d5f03bad510cd8979ab36b660954033 760 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 142 219 5.3E-11 T 12-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 M892_17205 3d5f03bad510cd8979ab36b660954033 760 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 599 621 - T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 M892_17205 3d5f03bad510cd8979ab36b660954033 760 Pfam PF03477 ATP cone domain 6 92 1.5E-18 T 12-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 M892_17205 3d5f03bad510cd8979ab36b660954033 760 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 735 1.0E-174 T 12-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 M892_17205 3d5f03bad510cd8979ab36b660954033 760 Pfam PF02867 Ribonucleotide reductase, barrel domain 223 731 1.9E-120 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 M892_17205 3d5f03bad510cd8979ab36b660954033 760 SUPERFAMILY SSF51998 222 738 1.34E-164 T 12-10-2018 M892_17205 3d5f03bad510cd8979ab36b660954033 760 Gene3D G3DSA:3.20.70.20 78 742 1.2E-155 T 12-10-2018 M892_17205 3d5f03bad510cd8979ab36b660954033 760 SUPERFAMILY SSF48168 10 221 1.57E-73 T 12-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 M892_17205 3d5f03bad510cd8979ab36b660954033 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 496 1.4E-37 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 M892_17205 3d5f03bad510cd8979ab36b660954033 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 562 1.4E-37 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 M892_17205 3d5f03bad510cd8979ab36b660954033 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 1.4E-37 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 M892_17205 3d5f03bad510cd8979ab36b660954033 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 444 1.4E-37 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 M892_17205 3d5f03bad510cd8979ab36b660954033 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 533 1.4E-37 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 M892_17205 3d5f03bad510cd8979ab36b660954033 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 298 317 1.4E-37 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 M892_10920 b6a134a29f3a532ba9205612b8683f91 255 Hamap MF_00443 Thiazole synthase [thiG]. 1 253 43.203 T 12-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 M892_10920 b6a134a29f3a532ba9205612b8683f91 255 Gene3D G3DSA:3.20.20.70 1 253 2.0E-111 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M892_10920 b6a134a29f3a532ba9205612b8683f91 255 Pfam PF05690 Thiazole biosynthesis protein ThiG 3 247 1.5E-110 T 12-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 M892_10920 b6a134a29f3a532ba9205612b8683f91 255 SUPERFAMILY SSF110399 1 235 2.35E-85 T 12-10-2018 M892_23500 38aa48de239310be6db3d0742a97cb2f 328 Pfam PF01551 Peptidase family M23 198 291 5.6E-30 T 12-10-2018 IPR016047 Peptidase M23 M892_23500 38aa48de239310be6db3d0742a97cb2f 328 SUPERFAMILY SSF51261 68 296 1.67E-54 T 12-10-2018 IPR011055 Duplicated hybrid motif M892_23500 38aa48de239310be6db3d0742a97cb2f 328 Gene3D G3DSA:2.70.70.10 169 296 4.0E-42 T 12-10-2018 IPR011055 Duplicated hybrid motif M892_23500 38aa48de239310be6db3d0742a97cb2f 328 Gene3D G3DSA:3.10.450.350 69 166 1.8E-11 T 12-10-2018 M892_06840 9dcc27e89c4275de1ceae97f835d388a 506 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 61 453 1.3E-98 T 12-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 M892_06840 9dcc27e89c4275de1ceae97f835d388a 506 Gene3D G3DSA:3.60.110.10 209 476 2.0E-15 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily M892_06840 9dcc27e89c4275de1ceae97f835d388a 506 SUPERFAMILY SSF56317 214 485 1.44E-40 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily M892_06840 9dcc27e89c4275de1ceae97f835d388a 506 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 8 490 23.286 T 12-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 M892_06840 9dcc27e89c4275de1ceae97f835d388a 506 Pfam PF00795 Carbon-nitrogen hydrolase 221 470 1.5E-38 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 M892_26555 2d52316dbcf7f7a57e9e234c33d24a1f 346 SUPERFAMILY SSF64518 65 307 3.4E-5 T 12-10-2018 M892_06700 1f154dc314535ae70602f6c3015bc636 266 Pfam PF02371 Transposase IS116/IS110/IS902 family 212 263 1.2E-6 T 12-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 M892_06700 1f154dc314535ae70602f6c3015bc636 266 Pfam PF01548 Transposase 8 142 3.1E-15 T 12-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 M892_06130 1f154dc314535ae70602f6c3015bc636 266 Pfam PF02371 Transposase IS116/IS110/IS902 family 212 263 1.2E-6 T 12-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 M892_06130 1f154dc314535ae70602f6c3015bc636 266 Pfam PF01548 Transposase 8 142 3.1E-15 T 12-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 M892_18865 a0898c55959aa2daaa5db49cbaf53cf4 112 Pfam PF04320 Protein with unknown function (DUF469) 11 111 1.9E-32 T 12-10-2018 IPR007416 Protein of unknown function DUF469 M892_27770 56be4ac53a5e60d98f0360d9d7de005e 360 Pfam PF01098 Cell cycle protein 14 355 4.6E-98 T 12-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 M892_27770 56be4ac53a5e60d98f0360d9d7de005e 360 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 10 354 9.9E-116 T 12-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 M892_27770 56be4ac53a5e60d98f0360d9d7de005e 360 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 4 359 25.967 T 12-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 M892_05805 9ecf41cb93ef84372803e62516ba3fd6 286 Gene3D G3DSA:3.10.129.90 2 286 4.5E-108 T 12-10-2018 M892_05805 9ecf41cb93ef84372803e62516ba3fd6 286 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 12 283 2.1E-96 T 12-10-2018 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 M892_05805 9ecf41cb93ef84372803e62516ba3fd6 286 SUPERFAMILY SSF54637 116 283 4.44E-60 T 12-10-2018 IPR029069 HotDog domain superfamily M892_05805 9ecf41cb93ef84372803e62516ba3fd6 286 Pfam PF13622 Thioesterase-like superfamily 33 282 4.5E-61 T 12-10-2018 M892_05805 9ecf41cb93ef84372803e62516ba3fd6 286 SUPERFAMILY SSF54637 6 114 9.39E-40 T 12-10-2018 IPR029069 HotDog domain superfamily M892_11520 8846fb2d694f82c199f5fd678de0dbf0 164 Gene3D G3DSA:3.30.70.1730 1 124 5.4E-35 T 12-10-2018 M892_11520 8846fb2d694f82c199f5fd678de0dbf0 164 SUPERFAMILY SSF160369 4 159 5.89E-45 T 12-10-2018 M892_11520 8846fb2d694f82c199f5fd678de0dbf0 164 Pfam PF00466 Ribosomal protein L10 5 101 7.1E-27 T 12-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 M892_11520 8846fb2d694f82c199f5fd678de0dbf0 164 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 159 24.151 T 12-10-2018 IPR022973 Ribosomal protein L10 M892_18265 3acd85fa40becbe3a5809e673dc1a850 376 Gene3D G3DSA:1.10.10.2840 249 376 4.1E-24 T 12-10-2018 M892_18265 3acd85fa40becbe3a5809e673dc1a850 376 Pfam PF13556 PucR C-terminal helix-turn-helix domain 314 370 1.2E-22 T 12-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain M892_18265 3acd85fa40becbe3a5809e673dc1a850 376 Pfam PF05651 Putative sugar diacid recognition 4 137 2.3E-52 T 12-10-2018 IPR008599 Putative sugar diacid recognition M892_23005 91a70a3fedca996274c29909794cb45d 145 SUPERFAMILY SSF158675 1 144 4.05E-52 T 12-10-2018 IPR023132 Sama2622-like superfamily M892_23005 91a70a3fedca996274c29909794cb45d 145 Pfam PF11269 Protein of unknown function (DUF3069) 24 143 1.3E-52 T 12-10-2018 IPR021422 Protein of unknown function DUF3069 M892_10305 4a3985a35702db89321eb8cf40f41384 329 SUPERFAMILY SSF110997 71 143 6.28E-5 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 M892_10305 4a3985a35702db89321eb8cf40f41384 329 Pfam PF05036 Sporulation related domain 73 143 1.7E-6 T 12-10-2018 IPR007730 Sporulation-like domain GO:0042834 M892_23915 149f0c347d73ebfcb21187399d634725 214 Pfam PF05643 Putative bacterial lipoprotein (DUF799) 11 207 2.8E-44 T 12-10-2018 IPR008517 Protein of unknown function DUF799 M892_23915 149f0c347d73ebfcb21187399d634725 214 Gene3D G3DSA:3.40.50.10610 24 184 4.9E-54 T 12-10-2018 M892_06055 07ad1f805777d07085c5ac765d58ee85 406 Pfam PF00425 chorismate binding enzyme 127 386 1.5E-70 T 12-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal M892_06055 07ad1f805777d07085c5ac765d58ee85 406 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 127 394 1.2E-82 T 12-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 M892_06055 07ad1f805777d07085c5ac765d58ee85 406 Gene3D G3DSA:3.60.120.10 6 401 9.4E-123 T 12-10-2018 IPR005801 ADC synthase GO:0009058 M892_06055 07ad1f805777d07085c5ac765d58ee85 406 SUPERFAMILY SSF56322 23 396 1.96E-87 T 12-10-2018 IPR005801 ADC synthase GO:0009058 M892_15945 131f43c302bcf2267b957105c87fe70c 167 Pfam PF11993 Ribosomal S4P (gammaproteobacterial) 1 164 2.3E-62 T 12-10-2018 IPR021879 Ribosomal S4P (gammaproteobacterial) M892_00585 b94bfd4ee8be8b0ca7ada36422642c92 263 Pfam PF01541 GIY-YIG catalytic domain 170 249 6.2E-5 T 12-10-2018 IPR000305 GIY-YIG endonuclease M892_00585 b94bfd4ee8be8b0ca7ada36422642c92 263 SUPERFAMILY SSF82771 169 250 5.49E-9 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 M892_12570 75ab96704cbd899c47e0a2b399f96a9f 153 Pfam PF13690 Chemotaxis phosphatase CheX 42 139 4.8E-22 T 12-10-2018 IPR028051 Chemotaxis phosphatase CheX-like domain M892_12570 75ab96704cbd899c47e0a2b399f96a9f 153 Gene3D G3DSA:3.40.1550.10 1 153 3.3E-46 T 12-10-2018 IPR028976 CheC-like superfamily M892_12570 75ab96704cbd899c47e0a2b399f96a9f 153 SUPERFAMILY SSF103039 1 153 1.83E-38 T 12-10-2018 IPR028976 CheC-like superfamily M892_15435 03c4604ceaaa286fd01bd7999a69bf1a 429 SUPERFAMILY SSF56935 26 429 1.16E-104 T 12-10-2018 M892_15435 03c4604ceaaa286fd01bd7999a69bf1a 429 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 19 429 3.4E-132 T 12-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) M892_15435 03c4604ceaaa286fd01bd7999a69bf1a 429 Gene3D G3DSA:2.40.160.60 26 429 1.0E-128 T 12-10-2018 M892_07295 783a2814fe4342f77fe715d67be20d6c 160 SUPERFAMILY SSF55729 1 151 9.96E-28 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_07295 783a2814fe4342f77fe715d67be20d6c 160 Pfam PF00583 Acetyltransferase (GNAT) family 26 136 3.5E-14 T 12-10-2018 IPR000182 GNAT domain M892_07295 783a2814fe4342f77fe715d67be20d6c 160 Gene3D G3DSA:3.40.630.30 1 159 1.3E-40 T 12-10-2018 M892_07440 eef1fb196d7d1871420ef812649207a5 281 Gene3D G3DSA:3.20.20.70 5 279 3.1E-59 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M892_07440 eef1fb196d7d1871420ef812649207a5 281 Pfam PF05853 beta-keto acid cleavage enzyme 12 275 3.3E-58 T 12-10-2018 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00310+2.3.1.247 M892_02985 b47b11d916151e6fd4c903e1a7dc39c9 219 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 198 218 2.1E-7 T 12-10-2018 M892_02985 b47b11d916151e6fd4c903e1a7dc39c9 219 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 178 197 2.1E-7 T 12-10-2018 M892_02985 b47b11d916151e6fd4c903e1a7dc39c9 219 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 160 177 2.1E-7 T 12-10-2018 M892_02985 b47b11d916151e6fd4c903e1a7dc39c9 219 PRINTS PR01021 OMPA domain signature 115 137 9.4E-13 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M892_02985 b47b11d916151e6fd4c903e1a7dc39c9 219 PRINTS PR01021 OMPA domain signature 145 160 9.4E-13 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M892_02985 b47b11d916151e6fd4c903e1a7dc39c9 219 PRINTS PR01021 OMPA domain signature 160 176 9.4E-13 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M892_02985 b47b11d916151e6fd4c903e1a7dc39c9 219 SUPERFAMILY SSF103088 103 218 1.7E-37 T 12-10-2018 IPR036737 OmpA-like domain superfamily M892_02985 b47b11d916151e6fd4c903e1a7dc39c9 219 Pfam PF13488 Glycine zipper 38 83 2.7E-12 T 12-10-2018 IPR039567 Glycine zipper domain M892_02985 b47b11d916151e6fd4c903e1a7dc39c9 219 Pfam PF00691 OmpA family 115 209 1.6E-23 T 12-10-2018 IPR006665 OmpA-like domain M892_02985 b47b11d916151e6fd4c903e1a7dc39c9 219 Gene3D G3DSA:3.30.1330.60 77 219 2.3E-44 T 12-10-2018 IPR036737 OmpA-like domain superfamily M892_19660 fc58749a482453362db7bdaf041130d7 271 SUPERFAMILY SSF47413 3 71 2.34E-8 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 M892_19660 fc58749a482453362db7bdaf041130d7 271 Gene3D G3DSA:1.10.260.40 4 118 8.9E-10 T 12-10-2018 M892_19660 fc58749a482453362db7bdaf041130d7 271 SMART SM00530 10 73 0.0058 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 M892_18280 8f2a1e09ab89e6d9bb91e0f7d7b1b505 92 SUPERFAMILY SSF54593 2 89 3.41E-6 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M892_18280 8f2a1e09ab89e6d9bb91e0f7d7b1b505 92 Gene3D G3DSA:3.10.180.10 1 91 4.2E-8 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M892_21820 2e7a005b71d6e9b60e006b806573c48c 338 Pfam PF01032 FecCD transport family 27 334 3.3E-83 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 M892_21820 2e7a005b71d6e9b60e006b806573c48c 338 Gene3D G3DSA:1.10.3470.10 9 338 5.2E-87 T 12-10-2018 IPR037294 ABC transporter, BtuC-like M892_21820 2e7a005b71d6e9b60e006b806573c48c 338 SUPERFAMILY SSF81345 11 334 5.75E-75 T 12-10-2018 IPR037294 ABC transporter, BtuC-like M892_21825 df52f3bf20047cfa67e6741a9059857c 298 Pfam PF01497 Periplasmic binding protein 44 273 1.9E-28 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain M892_21825 df52f3bf20047cfa67e6741a9059857c 298 SUPERFAMILY SSF53807 40 296 1.7E-58 T 12-10-2018 M892_21825 df52f3bf20047cfa67e6741a9059857c 298 Gene3D G3DSA:3.40.50.1980 19 129 3.2E-29 T 12-10-2018 M892_21825 df52f3bf20047cfa67e6741a9059857c 298 Gene3D G3DSA:3.40.50.1980 131 298 4.9E-48 T 12-10-2018 M892_14915 9e3e801877e8d0abdbd28f1e8e0170eb 280 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 238 264 - T 12-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 M892_14915 9e3e801877e8d0abdbd28f1e8e0170eb 280 Pfam PF01148 Cytidylyltransferase family 2 280 5.3E-71 T 12-10-2018 M892_06825 ea0c05390e35ad1ca59d27e1da975af8 365 Pfam PF02562 PhoH-like protein 120 323 1.7E-94 T 12-10-2018 IPR003714 PhoH-like protein GO:0005524 M892_06825 ea0c05390e35ad1ca59d27e1da975af8 365 SUPERFAMILY SSF52540 119 320 2.65E-39 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_06825 ea0c05390e35ad1ca59d27e1da975af8 365 Gene3D G3DSA:3.40.50.300 117 323 4.0E-73 T 12-10-2018 M892_20905 0536a62fe35f3cf6470991ef1cf65e92 146 SUPERFAMILY SSF55785 10 127 7.5E-12 T 12-10-2018 IPR035965 PAS domain superfamily M892_20905 0536a62fe35f3cf6470991ef1cf65e92 146 Pfam PF00989 PAS fold 16 134 1.1E-6 T 12-10-2018 IPR013767 PAS fold GO:0006355 M892_20905 0536a62fe35f3cf6470991ef1cf65e92 146 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 16 80 8.8E-6 T 12-10-2018 IPR000014 PAS domain M892_20905 0536a62fe35f3cf6470991ef1cf65e92 146 Gene3D G3DSA:3.30.450.20 6 141 1.5E-31 T 12-10-2018 M892_26575 3a409c51a14bbc68c3fd3b280793a0e8 378 Hamap MF_00416 Flagellar P-ring protein [flgI]. 13 378 37.24 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 M892_26575 3a409c51a14bbc68c3fd3b280793a0e8 378 PRINTS PR01010 Flagellar P-ring protein signature 117 134 2.9E-77 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 M892_26575 3a409c51a14bbc68c3fd3b280793a0e8 378 PRINTS PR01010 Flagellar P-ring protein signature 50 65 2.9E-77 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 M892_26575 3a409c51a14bbc68c3fd3b280793a0e8 378 PRINTS PR01010 Flagellar P-ring protein signature 201 219 2.9E-77 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 M892_26575 3a409c51a14bbc68c3fd3b280793a0e8 378 PRINTS PR01010 Flagellar P-ring protein signature 69 84 2.9E-77 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 M892_26575 3a409c51a14bbc68c3fd3b280793a0e8 378 PRINTS PR01010 Flagellar P-ring protein signature 265 277 2.9E-77 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 M892_26575 3a409c51a14bbc68c3fd3b280793a0e8 378 PRINTS PR01010 Flagellar P-ring protein signature 95 114 2.9E-77 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 M892_26575 3a409c51a14bbc68c3fd3b280793a0e8 378 PRINTS PR01010 Flagellar P-ring protein signature 175 193 2.9E-77 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 M892_26575 3a409c51a14bbc68c3fd3b280793a0e8 378 PRINTS PR01010 Flagellar P-ring protein signature 134 152 2.9E-77 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 M892_26575 3a409c51a14bbc68c3fd3b280793a0e8 378 PRINTS PR01010 Flagellar P-ring protein signature 35 50 2.9E-77 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 M892_26575 3a409c51a14bbc68c3fd3b280793a0e8 378 Pfam PF02119 Flagellar P-ring protein 36 377 2.9E-138 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 M892_04615 20bd4a42a4a574204c21204ac759b5f6 221 Pfam PF06578 YOP proteins translocation protein K (YscK) 10 221 1.2E-68 T 12-10-2018 IPR009510 Type III secretion system, secretion protein K GO:0009405 M892_04615 20bd4a42a4a574204c21204ac759b5f6 221 ProDom PD023059 PLASMID TYPE PROTEINS YOP III YSCK VIRULENCE K TRANSLOCATION PSCK 14 220 3.0E-70 T 12-10-2018 IPR009510 Type III secretion system, secretion protein K GO:0009405 M892_10710 088e2b1805fbfeea158608401f6f21ad 292 SMART SM00563 85 227 2.0E-19 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 M892_10710 088e2b1805fbfeea158608401f6f21ad 292 SUPERFAMILY SSF69593 36 284 4.84E-27 T 12-10-2018 M892_10710 088e2b1805fbfeea158608401f6f21ad 292 Pfam PF01553 Acyltransferase 73 226 9.3E-16 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 M892_09465 73e76f564f405b5dd26e7738c861c9bb 230 Gene3D G3DSA:3.90.550.10 3 230 1.7E-74 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M892_09465 73e76f564f405b5dd26e7738c861c9bb 230 Pfam PF02348 Cytidylyltransferase 9 215 1.0E-27 T 12-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 M892_09465 73e76f564f405b5dd26e7738c861c9bb 230 SUPERFAMILY SSF53448 5 229 1.36E-60 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M892_18245 3124b34085b537183867488e424c7a01 615 Gene3D G3DSA:1.10.1370.10 381 541 3.2E-19 T 12-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 M892_18245 3124b34085b537183867488e424c7a01 615 SUPERFAMILY SSF55486 3 550 3.56E-75 T 12-10-2018 M892_18245 3124b34085b537183867488e424c7a01 615 Gene3D G3DSA:1.10.1370.10 133 245 6.4E-6 T 12-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 M892_18245 3124b34085b537183867488e424c7a01 615 Gene3D G3DSA:3.40.390.10 283 380 3.2E-19 T 12-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 M892_18245 3124b34085b537183867488e424c7a01 615 Pfam PF01432 Peptidase family M3 283 493 5.5E-17 T 12-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 M892_24410 5cfce38f11f04824e61c636ba84fad89 119 SUPERFAMILY SSF52833 41 118 1.43E-18 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M892_24410 5cfce38f11f04824e61c636ba84fad89 119 Gene3D G3DSA:3.40.30.10 20 118 9.3E-14 T 12-10-2018 M892_24410 5cfce38f11f04824e61c636ba84fad89 119 Pfam PF00462 Glutaredoxin 43 96 1.3E-11 T 12-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 M892_15010 5302162037c47de21d96d260eaa8cdc4 251 Pfam PF08241 Methyltransferase domain 70 125 9.8E-10 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 M892_15010 5302162037c47de21d96d260eaa8cdc4 251 Gene3D G3DSA:3.40.50.150 57 179 7.6E-15 T 12-10-2018 M892_15010 5302162037c47de21d96d260eaa8cdc4 251 SUPERFAMILY SSF53335 73 212 1.24E-20 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M892_00695 01cb3922b2e0ab6082903356afa42a7f 239 PRINTS PR00111 Alpha/beta hydrolase fold signature 75 88 1.6E-7 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 M892_00695 01cb3922b2e0ab6082903356afa42a7f 239 PRINTS PR00111 Alpha/beta hydrolase fold signature 178 192 1.6E-7 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 M892_00695 01cb3922b2e0ab6082903356afa42a7f 239 PRINTS PR00111 Alpha/beta hydrolase fold signature 61 74 1.6E-7 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 M892_00695 01cb3922b2e0ab6082903356afa42a7f 239 Pfam PF00561 alpha/beta hydrolase fold 57 220 1.7E-12 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 M892_00695 01cb3922b2e0ab6082903356afa42a7f 239 SUPERFAMILY SSF53474 6 233 2.79E-41 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_00695 01cb3922b2e0ab6082903356afa42a7f 239 Gene3D G3DSA:3.40.50.1820 5 235 2.7E-38 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_00865 ff500b81b44eaff34a94a582fd22a7b9 146 Pfam PF05099 Tellurite resistance protein TerB 19 143 8.6E-40 T 12-10-2018 IPR007791 Co-chaperone DjlA, N-terminal M892_00865 ff500b81b44eaff34a94a582fd22a7b9 146 Gene3D G3DSA:1.10.3680.10 2 139 6.8E-20 T 12-10-2018 IPR029024 TerB-like M892_00865 ff500b81b44eaff34a94a582fd22a7b9 146 SUPERFAMILY SSF158682 2 144 9.42E-30 T 12-10-2018 IPR029024 TerB-like M892_19950 c43fea176a45a27e8bf1869f1eea59bb 264 Pfam PF00950 ABC 3 transport family 4 240 6.2E-11 T 12-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 M892_19950 c43fea176a45a27e8bf1869f1eea59bb 264 SUPERFAMILY SSF81345 40 237 1.44E-10 T 12-10-2018 IPR037294 ABC transporter, BtuC-like M892_19825 c4b3b932d51d9f1d00eb4acad034749b 222 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 57 68 2.3E-19 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_19825 c4b3b932d51d9f1d00eb4acad034749b 222 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 205 2.3E-19 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_19825 c4b3b932d51d9f1d00eb4acad034749b 222 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.3E-19 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_19825 c4b3b932d51d9f1d00eb4acad034749b 222 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 148 2.3E-19 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_19825 c4b3b932d51d9f1d00eb4acad034749b 222 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 165 2.3E-19 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_19825 c4b3b932d51d9f1d00eb4acad034749b 222 Gene3D G3DSA:3.40.50.720 1 222 1.5E-56 T 12-10-2018 M892_19825 c4b3b932d51d9f1d00eb4acad034749b 222 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 39 218 5.5E-32 T 12-10-2018 M892_19825 c4b3b932d51d9f1d00eb4acad034749b 222 SUPERFAMILY SSF51735 6 220 6.97E-43 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_04495 05ed3ad719b03f5bdee5bf02adb9c4c8 125 Pfam PF09474 Type III secretion system YscX (type_III_YscX) 1 125 6.5E-45 T 12-10-2018 IPR012672 Type III secretion system YscX M892_04495 05ed3ad719b03f5bdee5bf02adb9c4c8 125 TIGRFAM TIGR02502 type_III_YscX: type III secretion protein, YscX family 1 125 2.0E-48 T 12-10-2018 IPR012672 Type III secretion system YscX M892_26260 29d52e69e581e5986ac9d15a6418b66c 170 SUPERFAMILY SSF47175 65 160 7.42E-30 T 12-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 M892_26260 29d52e69e581e5986ac9d15a6418b66c 170 Pfam PF07361 Cytochrome b562 65 160 8.4E-29 T 12-10-2018 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 M892_26260 29d52e69e581e5986ac9d15a6418b66c 170 Gene3D G3DSA:1.20.120.10 59 167 6.0E-13 T 12-10-2018 M892_25215 eb1c3dd586cb398243897d96b41ed62c 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 286 9.1E-19 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M892_25215 eb1c3dd586cb398243897d96b41ed62c 296 SUPERFAMILY SSF161098 10 296 9.16E-69 T 12-10-2018 IPR035906 MetI-like superfamily M892_25215 eb1c3dd586cb398243897d96b41ed62c 296 Gene3D G3DSA:1.10.3720.10 1 283 2.8E-74 T 12-10-2018 IPR035906 MetI-like superfamily M892_27105 a30cb2577d9c8dbbf10c519590503e1e 108 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 10 69 1.8E-4 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 M892_27105 a30cb2577d9c8dbbf10c519590503e1e 108 SUPERFAMILY SSF54292 20 99 1.57E-14 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 M892_27105 a30cb2577d9c8dbbf10c519590503e1e 108 Gene3D G3DSA:3.10.20.740 7 108 1.6E-11 T 12-10-2018 M892_02250 c88576439e6f1c437536d43348a1de7b 370 Pfam PF00534 Glycosyl transferases group 1 199 340 2.7E-33 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 M892_02250 c88576439e6f1c437536d43348a1de7b 370 Gene3D G3DSA:3.40.50.2000 61 362 2.9E-62 T 12-10-2018 M892_02250 c88576439e6f1c437536d43348a1de7b 370 Gene3D G3DSA:3.40.50.2000 180 352 2.9E-62 T 12-10-2018 M892_02250 c88576439e6f1c437536d43348a1de7b 370 Pfam PF13439 Glycosyltransferase Family 4 26 183 1.0E-15 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 M892_02250 c88576439e6f1c437536d43348a1de7b 370 SUPERFAMILY SSF53756 15 364 1.85E-70 T 12-10-2018 M892_04215 63343f5665a7b38340cc75049bc2aa52 259 SUPERFAMILY SSF47240 11 256 6.09E-74 T 12-10-2018 IPR009078 Ferritin-like superfamily M892_04215 63343f5665a7b38340cc75049bc2aa52 259 PIRSF PIRSF020736 2 257 1.7E-92 T 12-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 M892_04215 63343f5665a7b38340cc75049bc2aa52 259 Gene3D G3DSA:1.20.1260.10 7 76 1.9E-16 T 12-10-2018 IPR012347 Ferritin-like M892_04215 63343f5665a7b38340cc75049bc2aa52 259 Gene3D G3DSA:1.20.1260.10 97 259 1.8E-55 T 12-10-2018 IPR012347 Ferritin-like M892_04215 63343f5665a7b38340cc75049bc2aa52 259 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 10 252 1.0E-119 T 12-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 M892_11225 185a6011613c5b6fff3524d6c9b72261 459 SUPERFAMILY SSF53098 1 458 7.59E-130 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_11225 185a6011613c5b6fff3524d6c9b72261 459 Gene3D G3DSA:3.90.350.10 66 347 2.1E-79 T 12-10-2018 IPR014736 Transposase, Tn5-like, core M892_11225 185a6011613c5b6fff3524d6c9b72261 459 Pfam PF01609 Transposase DDE domain 226 357 2.2E-5 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_11225 185a6011613c5b6fff3524d6c9b72261 459 Pfam PF14706 Transposase DNA-binding 9 65 5.0E-17 T 12-10-2018 IPR014735 Transposase, Tn5-like, N-terminal M892_11225 185a6011613c5b6fff3524d6c9b72261 459 Gene3D G3DSA:1.10.740.10 348 458 1.7E-41 T 12-10-2018 IPR014737 Transposase, Tn5-like, C-terminal M892_11225 185a6011613c5b6fff3524d6c9b72261 459 Gene3D G3DSA:1.10.246.40 1 65 9.7E-25 T 12-10-2018 IPR038215 Transposase, Tn5-like, N-terminal domain superfamily M892_11225 185a6011613c5b6fff3524d6c9b72261 459 Pfam PF02281 Transposase Tn5 dimerisation domain 369 454 1.9E-17 T 12-10-2018 IPR003201 Transposase Tn5, dimerisation M892_27750 fc412ca8bdb1052af3d8743aca55da64 251 SUPERFAMILY SSF53850 27 250 2.06E-22 T 12-10-2018 M892_27750 fc412ca8bdb1052af3d8743aca55da64 251 Gene3D G3DSA:3.40.190.10 33 250 7.3E-14 T 12-10-2018 M892_27750 fc412ca8bdb1052af3d8743aca55da64 251 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 30 250 3.4E-10 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M892_27750 fc412ca8bdb1052af3d8743aca55da64 251 Gene3D G3DSA:3.40.190.10 110 212 7.3E-14 T 12-10-2018 M892_15160 66f482c5c5fd53b03ee6b41a1389583f 95 Gene3D G3DSA:1.10.10.10 2 95 1.9E-36 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_15160 66f482c5c5fd53b03ee6b41a1389583f 95 Pfam PF09904 Winged helix-turn helix 4 91 2.1E-37 T 12-10-2018 IPR017162 Uncharacterised conserved protein UCP037266 M892_15160 66f482c5c5fd53b03ee6b41a1389583f 95 PIRSF PIRSF037266 1 94 1.4E-40 T 12-10-2018 IPR017162 Uncharacterised conserved protein UCP037266 M892_27880 8f5504a5e42ff1e937930807aa49dedd 354 SUPERFAMILY SSF48452 8 159 9.66E-9 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_26335 9d28a2495b01a0363ce7bd296adbc3c4 272 SUPERFAMILY SSF101801 198 262 3.14E-9 T 12-10-2018 IPR036429 SpoA-like superfamily M892_26335 9d28a2495b01a0363ce7bd296adbc3c4 272 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 200 261 1.4E-10 T 12-10-2018 IPR001543 Surface presentation of antigen (SpoA) M892_15225 f62bd2b1a4e750e737f6dc7124f308ed 136 SUPERFAMILY SSF101116 6 127 4.97E-39 T 12-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 M892_15225 f62bd2b1a4e750e737f6dc7124f308ed 136 PIRSF PIRSF039090 1 133 3.9E-43 T 12-10-2018 IPR003713 Flagellar protein FliS GO:0044780 M892_15225 f62bd2b1a4e750e737f6dc7124f308ed 136 Gene3D G3DSA:1.20.120.340 2 126 1.5E-39 T 12-10-2018 M892_15225 f62bd2b1a4e750e737f6dc7124f308ed 136 Pfam PF02561 Flagellar protein FliS 6 122 3.0E-37 T 12-10-2018 IPR003713 Flagellar protein FliS GO:0044780 M892_15225 f62bd2b1a4e750e737f6dc7124f308ed 136 TIGRFAM TIGR00208 fliS: flagellar protein FliS 4 122 5.2E-24 T 12-10-2018 IPR003713 Flagellar protein FliS GO:0044780 M892_04630 8d6d8628fa051883200fdc9992532e16 220 TIGRFAM TIGR02509 type_III_yopR: type III secretion effector, YopR family 98 219 2.4E-35 T 12-10-2018 IPR013349 Type III secretion system effector YopR GO:0009405|GO:0030254|GO:0030257 M892_04630 8d6d8628fa051883200fdc9992532e16 220 Pfam PF09025 YopR, type III needle-polymerisation regulator 92 220 8.2E-40 T 12-10-2018 IPR013349 Type III secretion system effector YopR GO:0009405|GO:0030254|GO:0030257 M892_04630 8d6d8628fa051883200fdc9992532e16 220 SUPERFAMILY SSF140591 100 201 1.14E-8 T 12-10-2018 M892_27050 c0a52f9eed5b0d924e60d0d2b48ea1b1 306 Pfam PF13737 Transposase DDE domain 19 129 5.7E-45 T 12-10-2018 IPR025668 Transposase DDE domain M892_01195 c0a52f9eed5b0d924e60d0d2b48ea1b1 306 Pfam PF13737 Transposase DDE domain 19 129 5.7E-45 T 12-10-2018 IPR025668 Transposase DDE domain M892_26225 c287ebd054e690e85cb9dcd6f12f22d6 227 Gene3D G3DSA:2.60.40.2130 28 169 1.9E-11 T 12-10-2018 IPR038678 Spondin, N-terminal domain superfamily Reactome: R-HSA-5083635|Reactome: R-HSA-5173214 M892_26225 c287ebd054e690e85cb9dcd6f12f22d6 227 Pfam PF06468 Spondin_N 40 157 4.3E-9 T 12-10-2018 IPR009465 Spondin, N-terminal Reactome: R-HSA-5083635|Reactome: R-HSA-5173214 M892_08465 76877d6513d7a7a4000eb8970898a8ba 421 SUPERFAMILY SSF81342 6 296 9.58E-93 T 12-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 M892_08465 76877d6513d7a7a4000eb8970898a8ba 421 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 295 396 7.4E-41 T 12-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 M892_08465 76877d6513d7a7a4000eb8970898a8ba 421 Gene3D G3DSA:1.20.810.10 1 421 5.0E-150 T 12-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 M892_08465 76877d6513d7a7a4000eb8970898a8ba 421 Pfam PF00033 Cytochrome b/b6/petB 23 211 2.8E-66 T 12-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 M892_08465 76877d6513d7a7a4000eb8970898a8ba 421 SUPERFAMILY SSF81648 297 412 1.29E-33 T 12-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 M892_08465 76877d6513d7a7a4000eb8970898a8ba 421 PIRSF PIRSF038885 1 421 1.7E-153 T 12-10-2018 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 M892_00060 480302867d8d5ade8dd1f520818cce9b 353 Gene3D G3DSA:3.40.50.1820 70 353 6.2E-89 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_00060 480302867d8d5ade8dd1f520818cce9b 353 Pfam PF00561 alpha/beta hydrolase fold 77 179 4.1E-15 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 M892_00060 480302867d8d5ade8dd1f520818cce9b 353 SUPERFAMILY SSF53474 72 349 3.54E-48 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_07105 32fda88675db3369226044e9314bd992 369 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 7 198 8.9E-86 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 M892_07105 32fda88675db3369226044e9314bd992 369 Gene3D G3DSA:3.90.870.10 1 205 3.0E-90 T 12-10-2018 M892_07105 32fda88675db3369226044e9314bd992 369 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 7 199 1.2E-76 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 M892_07105 32fda88675db3369226044e9314bd992 369 Pfam PF00925 GTP cyclohydrolase II 207 367 9.0E-40 T 12-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 M892_07105 32fda88675db3369226044e9314bd992 369 SUPERFAMILY SSF55821 3 202 1.67E-87 T 12-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily M892_07105 32fda88675db3369226044e9314bd992 369 SUPERFAMILY SSF142695 205 367 1.27E-47 T 12-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 M892_07105 32fda88675db3369226044e9314bd992 369 Gene3D G3DSA:3.40.50.10990 206 368 1.6E-31 T 12-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 M892_07105 32fda88675db3369226044e9314bd992 369 PIRSF PIRSF001259 3 369 4.1E-131 T 12-10-2018 M892_07105 32fda88675db3369226044e9314bd992 369 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 38.907 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 M892_18290 ff234c3c7118ee90b0d6cbabeff4e84b 51 Pfam PF14706 Transposase DNA-binding 8 41 1.5E-5 T 12-10-2018 IPR014735 Transposase, Tn5-like, N-terminal M892_18290 ff234c3c7118ee90b0d6cbabeff4e84b 51 Gene3D G3DSA:1.10.246.40 1 50 6.1E-7 T 12-10-2018 IPR038215 Transposase, Tn5-like, N-terminal domain superfamily M892_19770 6a1d1eec515aeb708f92f580fdd36f3d 300 Pfam PF04228 Putative neutral zinc metallopeptidase 1 297 1.5E-102 T 12-10-2018 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative M892_13500 0dc8d198239c23e20f8a22988ae99263 347 Gene3D G3DSA:3.30.2350.20 18 337 5.6E-107 T 12-10-2018 M892_13500 0dc8d198239c23e20f8a22988ae99263 347 SUPERFAMILY SSF55120 6 338 7.19E-97 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 M892_13500 0dc8d198239c23e20f8a22988ae99263 347 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 6 342 28.693 T 12-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 M892_13500 0dc8d198239c23e20f8a22988ae99263 347 Gene3D G3DSA:3.30.2340.10 170 302 5.6E-107 T 12-10-2018 M892_13500 0dc8d198239c23e20f8a22988ae99263 347 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 78 91 - T 12-10-2018 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 M892_13500 0dc8d198239c23e20f8a22988ae99263 347 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 186 337 3.8E-23 T 12-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 M892_13500 0dc8d198239c23e20f8a22988ae99263 347 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 9 170 4.0E-42 T 12-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 M892_13500 0dc8d198239c23e20f8a22988ae99263 347 TIGRFAM TIGR00094 tRNA_TruD_broad: tRNA pseudouridine synthase, TruD family 9 262 9.6E-57 T 12-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 M892_02135 c2b46168ff037030ebdb3fd9fba854e1 162 SUPERFAMILY SSF54001 44 160 1.25E-40 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily M892_02135 c2b46168ff037030ebdb3fd9fba854e1 162 Gene3D G3DSA:3.90.1720.10 40 162 2.7E-42 T 12-10-2018 M892_02135 c2b46168ff037030ebdb3fd9fba854e1 162 Pfam PF00877 NlpC/P60 family 55 159 4.8E-32 T 12-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain M892_26845 d613289059b4cc441096bc38046c2d26 191 SUPERFAMILY SSF52058 49 183 3.23E-18 T 12-10-2018 M892_26845 d613289059b4cc441096bc38046c2d26 191 Gene3D G3DSA:3.80.10.10 25 191 5.0E-28 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily M892_20915 4c48ddb18717e189c8e037e6db868d01 347 Hamap MF_00596 GMP reductase [guaC]. 1 345 50.002 T 12-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 M892_20915 4c48ddb18717e189c8e037e6db868d01 347 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 176 188 - T 12-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 M892_20915 4c48ddb18717e189c8e037e6db868d01 347 SUPERFAMILY SSF51412 6 336 2.62E-98 T 12-10-2018 M892_20915 4c48ddb18717e189c8e037e6db868d01 347 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 9 338 1.6E-78 T 12-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 M892_20915 4c48ddb18717e189c8e037e6db868d01 347 SMART SM01240 7 344 5.4E-137 T 12-10-2018 M892_20915 4c48ddb18717e189c8e037e6db868d01 347 Gene3D G3DSA:3.20.20.70 1 345 1.5E-116 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M892_20915 4c48ddb18717e189c8e037e6db868d01 347 TIGRFAM TIGR01305 GMP_reduct_1: guanosine monophosphate reductase 2 344 1.2E-184 T 12-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 M892_20915 4c48ddb18717e189c8e037e6db868d01 347 PIRSF PIRSF000235 1 347 1.9E-194 T 12-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 M892_00055 ef480d363b1e424cf04b710dcf7aa5d3 284 SUPERFAMILY SSF158855 30 280 4.58E-66 T 12-10-2018 M892_00055 ef480d363b1e424cf04b710dcf7aa5d3 284 Pfam PF03280 Proteobacterial lipase chaperone protein 85 269 2.5E-40 T 12-10-2018 IPR004961 Lipase chaperone GO:0006457|GO:0016020|GO:0051082 M892_19870 6d3b9ac7173efa9d66f9de1b5b0d5d8a 517 Pfam PF13817 IS66 C-terminal element 477 513 7.6E-8 T 12-10-2018 IPR039552 Transposase IS66, C-terminal M892_19870 6d3b9ac7173efa9d66f9de1b5b0d5d8a 517 Pfam PF13005 zinc-finger binding domain of transposase IS66 123 167 1.5E-16 T 12-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 M892_19870 6d3b9ac7173efa9d66f9de1b5b0d5d8a 517 Pfam PF13007 Transposase C of IS166 homeodomain 42 115 3.8E-14 T 12-10-2018 IPR024463 Transposase TnpC, homeodomain M892_19870 6d3b9ac7173efa9d66f9de1b5b0d5d8a 517 Pfam PF03050 Transposase IS66 family 187 470 7.9E-100 T 12-10-2018 IPR004291 Transposase, IS66 M892_25855 383222314a09d5dbcb41dd543045168b 113 Pfam PF03050 Transposase IS66 family 3 66 1.4E-24 T 12-10-2018 IPR004291 Transposase, IS66 M892_25855 383222314a09d5dbcb41dd543045168b 113 Pfam PF13817 IS66 C-terminal element 73 109 7.2E-9 T 12-10-2018 IPR039552 Transposase IS66, C-terminal M892_09595 88bd6a19ab2912c129fbfef36df6bc33 316 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 9 310 3.4E-130 T 12-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 M892_09595 88bd6a19ab2912c129fbfef36df6bc33 316 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 9 303 2.5E-71 T 12-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 M892_09595 88bd6a19ab2912c129fbfef36df6bc33 316 PIRSF PIRSF026649 6 312 3.1E-78 T 12-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 M892_09595 88bd6a19ab2912c129fbfef36df6bc33 316 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 8 313 43.434 T 12-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 M892_21745 298cef90c69eedbc3eee5ad071292ea4 140 Gene3D G3DSA:3.40.630.30 6 140 8.7E-34 T 12-10-2018 M892_21745 298cef90c69eedbc3eee5ad071292ea4 140 SUPERFAMILY SSF55729 15 139 1.32E-31 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_21745 298cef90c69eedbc3eee5ad071292ea4 140 Pfam PF13673 Acetyltransferase (GNAT) domain 25 139 4.0E-21 T 12-10-2018 IPR000182 GNAT domain M892_05855 6aee4b7cf5960895c7f6ae9e143196dd 196 SUPERFAMILY SSF48498 82 195 4.3E-20 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily M892_05855 6aee4b7cf5960895c7f6ae9e143196dd 196 SUPERFAMILY SSF46689 6 77 2.77E-6 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_05855 6aee4b7cf5960895c7f6ae9e143196dd 196 Gene3D G3DSA:1.10.357.10 1 191 7.2E-41 T 12-10-2018 M892_05855 6aee4b7cf5960895c7f6ae9e143196dd 196 Pfam PF13305 WHG domain 93 172 1.7E-11 T 12-10-2018 IPR025996 WHG domain M892_06585 f2f733507091e50ae1c36c424c80e434 137 Pfam PF00460 Flagella basal body rod protein 7 32 1.8E-7 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 M892_06585 f2f733507091e50ae1c36c424c80e434 137 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site M892_06585 f2f733507091e50ae1c36c424c80e434 137 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 91 135 6.7E-12 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain M892_06585 f2f733507091e50ae1c36c424c80e434 137 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 137 5.1E-51 T 12-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 M892_01420 1992c0a72a6c0d6f3f2a64c20a6eb63f 102 Gene3D G3DSA:1.10.3210.10 1 79 3.4E-14 T 12-10-2018 M892_04335 5e0ea27a39b76fb7bcb05e96cb129dc7 286 Pfam PF11575 FhuF 2Fe-2S C-terminal domain 247 265 1.1E-5 T 12-10-2018 IPR024726 Ferric iron reductase, C-terminal GO:0051537 M892_04335 5e0ea27a39b76fb7bcb05e96cb129dc7 286 Pfam PF06276 Ferric iron reductase FhuF-like transporter 79 224 8.0E-9 T 12-10-2018 IPR022770 Ferric iron reductase FhuF domain M892_11930 b81bf1a0f07032cef8113e9280b68ef6 467 Pfam PF01145 SPFH domain / Band 7 family 45 296 1.3E-38 T 12-10-2018 IPR001107 Band 7 domain M892_21115 69b935185563105b287178c80e665b04 312 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 27 279 7.4E-61 T 12-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 M892_21115 69b935185563105b287178c80e665b04 312 Gene3D G3DSA:3.40.190.10 28 289 1.8E-96 T 12-10-2018 M892_21115 69b935185563105b287178c80e665b04 312 TIGRFAM TIGR03414 ABC_choline_bnd: choline ABC transporter, periplasmic binding protein 22 307 2.6E-147 T 12-10-2018 IPR017783 Choline ABC transporter, substrate-binding protein GO:0015871|GO:0033265|GO:0042597 M892_21115 69b935185563105b287178c80e665b04 312 SUPERFAMILY SSF53850 20 296 7.82E-89 T 12-10-2018 M892_21115 69b935185563105b287178c80e665b04 312 Gene3D G3DSA:3.40.190.100 109 218 1.8E-96 T 12-10-2018 M892_19415 d39540a3e2ff4dc513c5fe06267df75c 146 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 6 125 1.4E-30 T 12-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 M892_19415 d39540a3e2ff4dc513c5fe06267df75c 146 Gene3D G3DSA:3.40.930.10 1 145 1.7E-32 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 M892_19415 d39540a3e2ff4dc513c5fe06267df75c 146 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 144 3.7E-32 T 12-10-2018 IPR002178 PTS EIIA type-2 domain M892_19415 d39540a3e2ff4dc513c5fe06267df75c 146 SUPERFAMILY SSF55804 1 144 1.09E-30 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 M892_28495 b39887d15a2dcc63eea0c9c164a8c902 776 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 165 349 1.4E-20 T 12-10-2018 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 M892_28495 b39887d15a2dcc63eea0c9c164a8c902 776 SUPERFAMILY SSF52540 386 723 1.95E-25 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_02265 2d531327383bde27775f130c7c012ab7 129 SUPERFAMILY SSF52540 3 108 4.92E-17 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_02265 2d531327383bde27775f130c7c012ab7 129 Pfam PF13671 AAA domain 6 106 7.5E-15 T 12-10-2018 M892_02265 2d531327383bde27775f130c7c012ab7 129 Gene3D G3DSA:3.40.50.300 4 129 9.8E-27 T 12-10-2018 M892_11240 2c2905f45b980ec2fdae1bd481ebee5a 109 Gene3D G3DSA:2.40.50.660 32 108 7.3E-8 T 12-10-2018 M892_11240 2c2905f45b980ec2fdae1bd481ebee5a 109 Pfam PF10694 Protein of unknown function (DUF2500) 2 105 2.1E-23 T 12-10-2018 IPR019635 Protein of unknown function DUF2500 M892_20815 7d01070b2968aa0383d1451ddfa48263 70 Pfam PF01527 Transposase 3 49 3.5E-7 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 M892_20815 7d01070b2968aa0383d1451ddfa48263 70 SUPERFAMILY SSF46689 2 68 3.23E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_03815 b729887126d0e5bfdb3fbe329ff159dd 77 Pfam PF06667 Phage shock protein B 3 74 9.7E-32 T 12-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 M892_03815 b729887126d0e5bfdb3fbe329ff159dd 77 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 1 75 1.0E-34 T 12-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 M892_04915 25d23a9c4c538e761560f9f29f1134fd 198 SUPERFAMILY SSF56672 34 183 9.49E-6 T 12-10-2018 M892_04065 34579cfbfbfb4b78a6c8cd00531b3b9d 172 Pfam PF12915 Protein of unknown function (DUF3833) 11 171 3.5E-65 T 12-10-2018 IPR024409 Protein of unknown function DUF3833 M892_22695 3ba0b611cdf789c470812622ef4df3d0 233 Pfam PF00005 ABC transporter 30 176 1.6E-36 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_22695 3ba0b611cdf789c470812622ef4df3d0 233 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_22695 3ba0b611cdf789c470812622ef4df3d0 233 SUPERFAMILY SSF52540 12 229 1.39E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_22695 3ba0b611cdf789c470812622ef4df3d0 233 Gene3D G3DSA:3.40.50.300 9 232 1.2E-70 T 12-10-2018 M892_22695 3ba0b611cdf789c470812622ef4df3d0 233 SMART SM00382 39 225 4.8E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_10575 94fe67f1ccd11fc5efc27747a904a30b 146 Gene3D G3DSA:3.40.50.360 1 144 1.8E-44 T 12-10-2018 IPR029039 Flavoprotein-like superfamily M892_10575 94fe67f1ccd11fc5efc27747a904a30b 146 Pfam PF00258 Flavodoxin 4 136 3.0E-21 T 12-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 M892_10575 94fe67f1ccd11fc5efc27747a904a30b 146 SUPERFAMILY SSF52218 2 143 3.77E-38 T 12-10-2018 IPR029039 Flavoprotein-like superfamily M892_08985 ade11b1660fad0fcf979efd3196ee45f 188 TIGRFAM TIGR01626 ytfJ_HI0045: conserved hypothetical protein YtfJ-family, TIGR01626 6 187 9.4E-83 T 12-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ M892_08985 ade11b1660fad0fcf979efd3196ee45f 188 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 29 187 2.3E-73 T 12-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ M892_28390 a39335e2284f9a939b6dbe03ef19a4b1 347 Pfam PF02371 Transposase IS116/IS110/IS902 family 221 305 1.9E-19 T 12-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 M892_28390 a39335e2284f9a939b6dbe03ef19a4b1 347 Pfam PF01548 Transposase 12 156 2.0E-14 T 12-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 M892_05195 b719d1de4417e56bcc964fdafb679df3 263 Pfam PF08241 Methyltransferase domain 52 148 5.0E-13 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 M892_05195 b719d1de4417e56bcc964fdafb679df3 263 Hamap MF_02057 tRNA 5-carboxymethoxyuridine methyltransferase [cmoM]. 3 259 39.981 T 12-10-2018 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase GO:0008168 M892_05195 b719d1de4417e56bcc964fdafb679df3 263 SUPERFAMILY SSF53335 7 250 3.72E-33 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M892_05195 b719d1de4417e56bcc964fdafb679df3 263 Gene3D G3DSA:3.40.50.150 9 263 6.9E-56 T 12-10-2018 M892_26070 284ae26348db6c675a78ab3bd170e712 291 Pfam PF05929 Phage capsid scaffolding protein (GPO) serine peptidase 6 283 4.4E-45 T 12-10-2018 IPR009228 Capsid scaffolding protein GpO GO:0019069 M892_18300 dd04f78a0054f83bda0015d51b8aaa35 305 Pfam PF00892 EamA-like transporter family 9 135 4.8E-13 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M892_18300 dd04f78a0054f83bda0015d51b8aaa35 305 Pfam PF00892 EamA-like transporter family 154 282 6.6E-13 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M892_18300 dd04f78a0054f83bda0015d51b8aaa35 305 SUPERFAMILY SSF103481 193 285 3.14E-12 T 12-10-2018 M892_18300 dd04f78a0054f83bda0015d51b8aaa35 305 SUPERFAMILY SSF103481 37 138 1.7E-12 T 12-10-2018 M892_27375 8d750f6cf400daf09fd8129f6f98c34a 946 Pfam PF15976 CS1-pili formation C-terminal 763 852 5.1E-9 T 12-10-2018 IPR031917 Pilus assembly protein, C-terminal domain M892_27375 8d750f6cf400daf09fd8129f6f98c34a 946 Pfam PF16967 E-set like domain 270 336 2.8E-6 T 12-10-2018 IPR032636 Pilus assembly protein, E-set like domain M892_22525 8d750f6cf400daf09fd8129f6f98c34a 946 Pfam PF15976 CS1-pili formation C-terminal 763 852 5.1E-9 T 12-10-2018 IPR031917 Pilus assembly protein, C-terminal domain M892_22525 8d750f6cf400daf09fd8129f6f98c34a 946 Pfam PF16967 E-set like domain 270 336 2.8E-6 T 12-10-2018 IPR032636 Pilus assembly protein, E-set like domain M892_11840 0675b39ed7768129c674ec9146c301b1 178 Pfam PF04186 FxsA cytoplasmic membrane protein 13 120 1.0E-34 T 12-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 M892_06220 7c0b874a1535175629138e74e37b3e53 293 PRINTS PR00691 Adhesin B signature 123 142 1.6E-6 T 12-10-2018 IPR006129 Adhesin B GO:0007155 M892_06220 7c0b874a1535175629138e74e37b3e53 293 PRINTS PR00691 Adhesin B signature 63 82 1.6E-6 T 12-10-2018 IPR006129 Adhesin B GO:0007155 M892_06220 7c0b874a1535175629138e74e37b3e53 293 PRINTS PR00691 Adhesin B signature 44 62 1.6E-6 T 12-10-2018 IPR006129 Adhesin B GO:0007155 M892_06220 7c0b874a1535175629138e74e37b3e53 293 PRINTS PR00691 Adhesin B signature 179 196 1.6E-6 T 12-10-2018 IPR006129 Adhesin B GO:0007155 M892_06220 7c0b874a1535175629138e74e37b3e53 293 SUPERFAMILY SSF53807 17 291 3.19E-77 T 12-10-2018 M892_06220 7c0b874a1535175629138e74e37b3e53 293 Gene3D G3DSA:3.40.50.1980 21 179 5.0E-49 T 12-10-2018 M892_06220 7c0b874a1535175629138e74e37b3e53 293 Gene3D G3DSA:3.40.50.1980 180 293 1.7E-40 T 12-10-2018 M892_06220 7c0b874a1535175629138e74e37b3e53 293 PRINTS PR00690 Adhesin family signature 232 250 4.0E-9 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 M892_06220 7c0b874a1535175629138e74e37b3e53 293 PRINTS PR00690 Adhesin family signature 63 80 4.0E-9 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 M892_06220 7c0b874a1535175629138e74e37b3e53 293 PRINTS PR00690 Adhesin family signature 179 200 4.0E-9 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 M892_06220 7c0b874a1535175629138e74e37b3e53 293 PRINTS PR00690 Adhesin family signature 50 63 4.0E-9 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 M892_06220 7c0b874a1535175629138e74e37b3e53 293 Pfam PF01297 Zinc-uptake complex component A periplasmic 22 289 4.5E-60 T 12-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 M892_23650 5d64308310fabb90b88fba1fc370de84 454 SUPERFAMILY SSF53850 34 334 2.61E-19 T 12-10-2018 M892_23650 5d64308310fabb90b88fba1fc370de84 454 Gene3D G3DSA:3.40.190.10 119 437 2.6E-140 T 12-10-2018 M892_23650 5d64308310fabb90b88fba1fc370de84 454 Gene3D G3DSA:3.40.190.10 34 432 2.6E-140 T 12-10-2018 M892_23650 5d64308310fabb90b88fba1fc370de84 454 Pfam PF13379 NMT1-like family 28 308 1.5E-104 T 12-10-2018 M892_19030 0c770a7f2d26af9f729c28fe0d955225 184 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 127 160 1.3E-7 T 12-10-2018 IPR001451 Hexapeptide repeat M892_19030 0c770a7f2d26af9f729c28fe0d955225 184 Pfam PF12464 Maltose acetyltransferase 6 55 9.9E-10 T 12-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 M892_19030 0c770a7f2d26af9f729c28fe0d955225 184 SMART SM01266 4 56 5.1E-13 T 12-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 M892_19030 0c770a7f2d26af9f729c28fe0d955225 184 SUPERFAMILY SSF51161 56 183 3.33E-41 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily M892_19030 0c770a7f2d26af9f729c28fe0d955225 184 Gene3D G3DSA:2.160.10.10 1 184 1.0E-62 T 12-10-2018 M892_19030 0c770a7f2d26af9f729c28fe0d955225 184 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 135 163 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 M892_19205 7649839f6039ada1fece736f5124be51 278 SUPERFAMILY SSF56925 57 267 3.14E-5 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel M892_09780 0ed4af27acfccc8648b67930af8940d8 253 Pfam PF01203 Type II secretion system (T2SS), protein N 37 247 5.9E-57 T 12-10-2018 IPR022792 Type II secretion system, protein N M892_25180 b8c10eec2bce966424d14392d5278f7a 305 Gene3D G3DSA:3.40.630.10 4 305 6.8E-118 T 12-10-2018 M892_25180 b8c10eec2bce966424d14392d5278f7a 305 Pfam PF00246 Zinc carboxypeptidase 74 146 1.0E-7 T 12-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 M892_25180 b8c10eec2bce966424d14392d5278f7a 305 SUPERFAMILY SSF53187 36 289 7.94E-40 T 12-10-2018 M892_08775 e3797a7c80a8806c0dd5be580ebdb68a 182 Pfam PF01569 PAP2 superfamily 71 179 1.4E-19 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase M892_08775 e3797a7c80a8806c0dd5be580ebdb68a 182 SUPERFAMILY SSF48317 13 179 1.26E-37 T 12-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily M892_08775 e3797a7c80a8806c0dd5be580ebdb68a 182 Gene3D G3DSA:1.20.144.10 6 181 1.0E-21 T 12-10-2018 M892_08775 e3797a7c80a8806c0dd5be580ebdb68a 182 SMART SM00014 68 177 3.8E-15 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase M892_26155 40701518dfe608925cb89b59b790e920 627 Gene3D G3DSA:3.40.50.300 15 332 5.3E-13 T 12-10-2018 M892_12800 84f51626e0c9bb53e3b40047ca69d261 1292 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 7 1280 0.0 T 12-10-2018 IPR011836 Conserved hypothetical protein CHP02099 M892_12800 84f51626e0c9bb53e3b40047ca69d261 1292 Pfam PF13116 Protein of unknown function 506 792 1.4E-93 T 12-10-2018 IPR025263 Domain of unknown function DUF3971 M892_12800 84f51626e0c9bb53e3b40047ca69d261 1292 Pfam PF13502 AsmA-like C-terminal region 1030 1270 4.0E-57 T 12-10-2018 IPR032712 AsmA-like, C-terminal M892_02040 d51e2fcc19e4c11b1fc953e8a19c6e19 272 SUPERFAMILY SSF53850 29 256 3.04E-32 T 12-10-2018 M892_02040 d51e2fcc19e4c11b1fc953e8a19c6e19 272 Gene3D G3DSA:3.40.190.10 31 255 1.9E-97 T 12-10-2018 M892_02040 d51e2fcc19e4c11b1fc953e8a19c6e19 272 Pfam PF12849 PBP superfamily domain 31 247 1.2E-30 T 12-10-2018 IPR024370 PBP domain M892_02040 d51e2fcc19e4c11b1fc953e8a19c6e19 272 Gene3D G3DSA:3.40.190.10 106 218 1.9E-97 T 12-10-2018 M892_04105 32dc84ac952970c8d41f231982800fab 289 Gene3D G3DSA:3.30.2010.10 68 161 4.8E-37 T 12-10-2018 M892_04105 32dc84ac952970c8d41f231982800fab 289 Pfam PF01435 Peptidase family M48 78 286 8.5E-40 T 12-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 M892_04105 32dc84ac952970c8d41f231982800fab 289 Hamap MF_00188 Protease HtpX [htpX]. 1 287 24.976 T 12-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 M892_24645 48ef68933f4e8d9f5bfd9c83403b7745 70 Gene3D G3DSA:3.40.50.2300 5 68 7.6E-20 T 12-10-2018 M892_24645 48ef68933f4e8d9f5bfd9c83403b7745 70 Pfam PF00072 Response regulator receiver domain 1 63 1.4E-10 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M892_24645 48ef68933f4e8d9f5bfd9c83403b7745 70 SUPERFAMILY SSF52172 1 66 4.27E-17 T 12-10-2018 IPR011006 CheY-like superfamily M892_09545 a65c1c5b8040393aa4fd3b5a8700e669 343 Gene3D G3DSA:3.40.50.2000 150 325 1.8E-53 T 12-10-2018 M892_09545 a65c1c5b8040393aa4fd3b5a8700e669 343 Pfam PF00534 Glycosyl transferases group 1 166 320 1.7E-32 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 M892_09545 a65c1c5b8040393aa4fd3b5a8700e669 343 SUPERFAMILY SSF53756 3 342 1.97E-62 T 12-10-2018 M892_09545 a65c1c5b8040393aa4fd3b5a8700e669 343 Gene3D G3DSA:3.40.50.2000 22 338 1.8E-53 T 12-10-2018 M892_11335 42677d39ad68e904d9522524050379ae 138 Pfam PF08388 Group II intron, maturase-specific domain 1 64 8.5E-14 T 12-10-2018 IPR013597 Group II intron, maturase-specific M892_25455 d96ec9b1800c9613b5e791f24f618f9d 1161 SUPERFAMILY SSF56935 856 1135 1.3E-7 T 12-10-2018 M892_25355 88aab42065c2696429d1929243544f49 99 SUPERFAMILY SSF52794 2 94 2.96E-33 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 M892_25355 88aab42065c2696429d1929243544f49 99 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 4 86 6.0E-32 T 12-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 M892_25355 88aab42065c2696429d1929243544f49 99 Gene3D G3DSA:3.40.50.2300 1 98 1.1E-37 T 12-10-2018 M892_25355 88aab42065c2696429d1929243544f49 99 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 94 2.8E-18 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 M892_13410 ecaf4a86d6f7bbf8dc1d26af6b64ef49 156 PIRSF PIRSF004923 1 156 7.4E-39 T 12-10-2018 IPR026268 Protein RseC M892_13410 ecaf4a86d6f7bbf8dc1d26af6b64ef49 156 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 19 149 6.2E-32 T 12-10-2018 M892_08970 be31ee7761dfba438cfc9e0396da7d98 570 Gene3D G3DSA:2.40.160.50 262 570 4.9E-98 T 12-10-2018 M892_08970 be31ee7761dfba438cfc9e0396da7d98 570 Pfam PF17243 POTRA domain TamA domain 1 25 95 2.4E-21 T 12-10-2018 IPR035243 TamA, POTRA domain 1 M892_08970 be31ee7761dfba438cfc9e0396da7d98 570 Pfam PF01103 Surface antigen 275 567 1.4E-30 T 12-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 M892_08970 be31ee7761dfba438cfc9e0396da7d98 570 Gene3D G3DSA:3.10.20.310 20 96 6.6E-25 T 12-10-2018 M892_08970 be31ee7761dfba438cfc9e0396da7d98 570 Gene3D G3DSA:3.10.20.310 97 184 2.7E-29 T 12-10-2018 M892_08970 be31ee7761dfba438cfc9e0396da7d98 570 Pfam PF07244 Surface antigen variable number repeat 105 177 5.1E-7 T 12-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 M892_08970 be31ee7761dfba438cfc9e0396da7d98 570 Gene3D G3DSA:3.10.20.310 185 261 1.1E-17 T 12-10-2018 M892_11320 66642e2c1d9de82bdc4df042e1a1bad1 179 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 15 174 23.567 T 12-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 M892_11320 66642e2c1d9de82bdc4df042e1a1bad1 179 Gene3D G3DSA:3.40.1410.10 10 174 8.4E-42 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily M892_11320 66642e2c1d9de82bdc4df042e1a1bad1 179 Pfam PF04345 Chorismate lyase 14 178 3.6E-57 T 12-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 M892_11320 66642e2c1d9de82bdc4df042e1a1bad1 179 SUPERFAMILY SSF64288 7 174 4.39E-46 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily M892_14370 f0ae6e4f30e41bed4cf7d2f3deb253f5 161 Pfam PF07811 TadE-like protein 10 52 5.7E-5 T 12-10-2018 IPR012495 TadE-like M892_23550 d2019ff21d85f03cf39ac16713b7ef32 873 Gene3D G3DSA:3.40.50.150 144 442 8.6E-96 T 12-10-2018 M892_23550 d2019ff21d85f03cf39ac16713b7ef32 873 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 191 205 5.8E-22 T 12-10-2018 M892_23550 d2019ff21d85f03cf39ac16713b7ef32 873 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 303 327 5.8E-22 T 12-10-2018 M892_23550 d2019ff21d85f03cf39ac16713b7ef32 873 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 269 281 5.8E-22 T 12-10-2018 M892_23550 d2019ff21d85f03cf39ac16713b7ef32 873 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 167 183 5.8E-22 T 12-10-2018 M892_23550 d2019ff21d85f03cf39ac16713b7ef32 873 Gene3D G3DSA:1.20.1260.30 1 134 5.5E-19 T 12-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily M892_23550 d2019ff21d85f03cf39ac16713b7ef32 873 Pfam PF02384 N-6 DNA Methylase 145 454 1.4E-100 T 12-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 M892_23550 d2019ff21d85f03cf39ac16713b7ef32 873 SUPERFAMILY SSF53335 8 494 2.5E-128 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M892_23550 d2019ff21d85f03cf39ac16713b7ef32 873 Pfam PF12161 HsdM N-terminal domain 4 131 1.4E-23 T 12-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain M892_23550 d2019ff21d85f03cf39ac16713b7ef32 873 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 272 278 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 M892_10895 0c836ae90b2ab733669de4a30e0a3ace 127 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 7 125 18.845 T 12-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 M892_10895 0c836ae90b2ab733669de4a30e0a3ace 127 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 9 120 1.2E-23 T 12-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 M892_10895 0c836ae90b2ab733669de4a30e0a3ace 127 TIGRFAM TIGR00494 crcB: protein CrcB 10 123 1.1E-29 T 12-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 M892_21465 b5577cc2c09c42935acd9bb63f143c7c 455 TIGRFAM TIGR00771 DcuC: transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family 55 441 9.5E-140 T 12-10-2018 IPR004669 C4-dicarboxylate anaerobic carrier GO:0015556|GO:0015740|GO:0016021 M892_21465 b5577cc2c09c42935acd9bb63f143c7c 455 Pfam PF03606 C4-dicarboxylate anaerobic carrier 2 451 3.2E-123 T 12-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 M892_17010 75b5539fac1ebbaa9e6d8b80818d4108 66 Pfam PF14056 Domain of unknown function (DUF4250) 10 61 2.6E-18 T 12-10-2018 IPR025346 Protein of unknown function DUF4250 M892_05040 9e4e627d1a870463a787473581fc589e 388 SUPERFAMILY SSF52440 174 280 5.75E-42 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily M892_05040 9e4e627d1a870463a787473581fc589e 388 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 386 1.8E-159 T 12-10-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain M892_05040 9e4e627d1a870463a787473581fc589e 388 SUPERFAMILY SSF56059 1 385 1.68E-86 T 12-10-2018 M892_05040 9e4e627d1a870463a787473581fc589e 388 Gene3D G3DSA:3.30.1490.330 264 345 1.8E-26 T 12-10-2018 M892_13000 e7c52bb5bc7847d66c93ecd2866f37a9 132 Pfam PF09834 Predicted membrane protein (DUF2061) 66 115 3.7E-20 T 12-10-2018 IPR018638 Domain of unknown function DUF2061, membrane M892_13000 e7c52bb5bc7847d66c93ecd2866f37a9 132 Pfam PF09834 Predicted membrane protein (DUF2061) 1 52 6.3E-21 T 12-10-2018 IPR018638 Domain of unknown function DUF2061, membrane M892_03740 203ae3d3fc94ec6734fed175849b2b7b 399 Gene3D G3DSA:3.90.1150.10 8 395 1.9E-159 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M892_03740 203ae3d3fc94ec6734fed175849b2b7b 399 PRINTS PR00799 Aspartate aminotransferase signature 209 221 1.7E-38 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 M892_03740 203ae3d3fc94ec6734fed175849b2b7b 399 PRINTS PR00799 Aspartate aminotransferase signature 276 301 1.7E-38 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 M892_03740 203ae3d3fc94ec6734fed175849b2b7b 399 PRINTS PR00799 Aspartate aminotransferase signature 178 197 1.7E-38 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 M892_03740 203ae3d3fc94ec6734fed175849b2b7b 399 PRINTS PR00799 Aspartate aminotransferase signature 344 362 1.7E-38 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 M892_03740 203ae3d3fc94ec6734fed175849b2b7b 399 Gene3D G3DSA:3.40.640.10 63 303 1.9E-159 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M892_03740 203ae3d3fc94ec6734fed175849b2b7b 399 SUPERFAMILY SSF53383 1 398 4.09E-112 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M892_03740 203ae3d3fc94ec6734fed175849b2b7b 399 Pfam PF00155 Aminotransferase class I and II 30 394 4.0E-82 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 M892_03740 203ae3d3fc94ec6734fed175849b2b7b 399 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 246 259 - T 12-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 M892_20215 8a6aee1bb2d3ad0576bb2b71dc3d9345 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 277 5.4E-17 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M892_20215 8a6aee1bb2d3ad0576bb2b71dc3d9345 282 Gene3D G3DSA:1.10.3720.10 1 275 1.4E-49 T 12-10-2018 IPR035906 MetI-like superfamily M892_20215 8a6aee1bb2d3ad0576bb2b71dc3d9345 282 SUPERFAMILY SSF161098 4 278 8.76E-57 T 12-10-2018 IPR035906 MetI-like superfamily M892_19480 a71e2a1bae884dc111ac57aecd233131 241 SUPERFAMILY SSF55811 16 159 2.38E-18 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 M892_19480 a71e2a1bae884dc111ac57aecd233131 241 Pfam PF00293 NUDIX domain 19 149 9.3E-9 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 M892_19480 a71e2a1bae884dc111ac57aecd233131 241 Gene3D G3DSA:3.90.79.10 3 161 8.6E-27 T 12-10-2018 M892_14780 67ec72fb826be75fec1ee4675ff6f7de 159 SUPERFAMILY SSF54534 83 158 1.01E-9 T 12-10-2018 M892_14780 67ec72fb826be75fec1ee4675ff6f7de 159 Gene3D G3DSA:3.10.50.30 80 159 9.8E-6 T 12-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 M892_14780 67ec72fb826be75fec1ee4675ff6f7de 159 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 158 7.8E-7 T 12-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 M892_23065 93ce5725d374e001a3cfcbefc9ff83c3 176 Pfam PF02311 AraC-like ligand binding domain 33 106 1.2E-5 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 M892_23065 93ce5725d374e001a3cfcbefc9ff83c3 176 SUPERFAMILY SSF51215 27 161 3.27E-19 T 12-10-2018 IPR037923 Transcription regulator HTH-like M892_23065 93ce5725d374e001a3cfcbefc9ff83c3 176 Gene3D G3DSA:2.60.120.280 30 124 1.3E-9 T 12-10-2018 M892_14185 294f7ee2096473ede6ec3aad1c33d435 151 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 12 144 8.7E-37 T 12-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 M892_14185 294f7ee2096473ede6ec3aad1c33d435 151 Gene3D G3DSA:3.40.630.30 3 149 2.1E-38 T 12-10-2018 M892_14185 294f7ee2096473ede6ec3aad1c33d435 151 Pfam PF00583 Acetyltransferase (GNAT) family 17 121 1.0E-14 T 12-10-2018 IPR000182 GNAT domain M892_14185 294f7ee2096473ede6ec3aad1c33d435 151 SUPERFAMILY SSF55729 2 145 2.96E-29 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_02960 6e19eb3d8b91aa75d4c497b50dedb1c2 241 Pfam PF12119 Protein of unknown function (DUF3581) 1 217 3.3E-99 T 12-10-2018 IPR021974 Protein of unknown function DUF3581 M892_09855 4a758fe4b016cd2215a9904310541249 731 Pfam PF05170 AsmA family 1 569 3.8E-133 T 12-10-2018 IPR007844 AsmA M892_16290 2dd733e60b59ecb269ed56f4b6b964d3 107 Gene3D G3DSA:2.60.40.1180 20 106 7.3E-21 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta M892_16290 2dd733e60b59ecb269ed56f4b6b964d3 107 Pfam PF16657 Maltogenic Amylase, C-terminal domain 26 101 8.9E-8 T 12-10-2018 IPR032091 Maltogenic Amylase, C-terminal M892_16290 2dd733e60b59ecb269ed56f4b6b964d3 107 SUPERFAMILY SSF51011 26 106 4.68E-16 T 12-10-2018 M892_18615 f254a40e621f9bfe27070ad07ce641d0 449 Pfam PF13005 zinc-finger binding domain of transposase IS66 55 99 1.4E-16 T 12-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 M892_18615 f254a40e621f9bfe27070ad07ce641d0 449 Pfam PF13817 IS66 C-terminal element 409 445 6.4E-8 T 12-10-2018 IPR039552 Transposase IS66, C-terminal M892_18615 f254a40e621f9bfe27070ad07ce641d0 449 Pfam PF03050 Transposase IS66 family 119 402 2.4E-99 T 12-10-2018 IPR004291 Transposase, IS66 M892_13610 612bed3c08c91fd48742ac40ea4b1868 225 Pfam PF03412 Peptidase C39 family 46 181 1.8E-21 T 12-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 M892_13610 612bed3c08c91fd48742ac40ea4b1868 225 Gene3D G3DSA:3.90.70.10 34 187 6.5E-32 T 12-10-2018 M892_04920 7a47248dd8b9da41e5bdf880c326f117 896 Gene3D G3DSA:2.60.40.10 476 568 1.0E-5 T 12-10-2018 IPR013783 Immunoglobulin-like fold M892_04920 7a47248dd8b9da41e5bdf880c326f117 896 SUPERFAMILY SSF49373 487 562 6.28E-7 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments M892_04920 7a47248dd8b9da41e5bdf880c326f117 896 SUPERFAMILY SSF49373 567 638 1.18E-5 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments M892_01985 b35d663fbc0e371db57c81300641dbd1 210 SUPERFAMILY SSF89155 7 191 2.22E-53 T 12-10-2018 IPR036411 TorD-like superfamily M892_01985 b35d663fbc0e371db57c81300641dbd1 210 Gene3D G3DSA:1.10.3480.10 3 197 1.4E-41 T 12-10-2018 M892_01985 b35d663fbc0e371db57c81300641dbd1 210 Pfam PF02613 Nitrate reductase delta subunit 45 159 3.2E-30 T 12-10-2018 IPR020945 DMSO/Nitrate reductase chaperone M892_00515 05f8e4600e6a31658871d0abe8e411f6 95 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 3 89 1.5E-15 T 12-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family M892_00515 05f8e4600e6a31658871d0abe8e411f6 95 Gene3D G3DSA:3.30.2310.20 1 92 1.8E-16 T 12-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily M892_24305 80813c44836b42f47296f9e991041b07 297 SUPERFAMILY SSF161111 9 214 2.62E-31 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily M892_24305 80813c44836b42f47296f9e991041b07 297 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 12 281 1.1E-25 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 M892_24305 80813c44836b42f47296f9e991041b07 297 Pfam PF01545 Cation efflux family 14 214 2.4E-32 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 M892_24305 80813c44836b42f47296f9e991041b07 297 Gene3D G3DSA:1.20.1510.10 10 214 5.7E-18 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily M892_09245 055afa0c562126946e9f62b71d7d791d 183 SUPERFAMILY SSF110997 107 180 3.14E-18 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 M892_09245 055afa0c562126946e9f62b71d7d791d 183 Pfam PF05036 Sporulation related domain 109 178 1.6E-14 T 12-10-2018 IPR007730 Sporulation-like domain GO:0042834 M892_09245 055afa0c562126946e9f62b71d7d791d 183 Gene3D G3DSA:3.30.70.1070 103 181 9.0E-28 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 M892_17165 9039dba9f7ee87d57db592f890fdcbb0 417 Gene3D G3DSA:3.40.50.720 4 398 4.6E-144 T 12-10-2018 M892_17165 9039dba9f7ee87d57db592f890fdcbb0 417 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 149 392 8.8E-30 T 12-10-2018 IPR032095 Saccharopine dehydrogenase, C-terminal Reactome: R-HSA-71064 M892_17165 9039dba9f7ee87d57db592f890fdcbb0 417 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 3 144 2.8E-32 T 12-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 M892_17165 9039dba9f7ee87d57db592f890fdcbb0 417 Gene3D G3DSA:3.30.360.10 159 355 4.6E-144 T 12-10-2018 M892_17165 9039dba9f7ee87d57db592f890fdcbb0 417 SUPERFAMILY SSF51735 2 179 6.34E-16 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_17800 e08842604d8b138f0f3dd29600251b3f 196 Gene3D G3DSA:3.40.50.300 5 170 9.1E-12 T 12-10-2018 M892_17800 e08842604d8b138f0f3dd29600251b3f 196 Pfam PF05621 Bacterial TniB protein 23 164 6.2E-25 T 12-10-2018 IPR008868 Bacterial TniB M892_17800 e08842604d8b138f0f3dd29600251b3f 196 SMART SM00382 39 177 9.2E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_17800 e08842604d8b138f0f3dd29600251b3f 196 SUPERFAMILY SSF52540 29 162 8.46E-12 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_17800 e08842604d8b138f0f3dd29600251b3f 196 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 126 135 - T 12-10-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site M892_28660 11dc065d543f62a02c633e1cf80b75ae 249 SUPERFAMILY SSF56954 60 232 1.7E-5 T 12-10-2018 M892_04505 8347dde299bccc31ebc2a82fcf835db2 94 ProDom PD029314 TYEA PLASMID ACR1 SECRETION CONTROL TARGETING TYPE LSSA VP1666 TARGET 1 75 7.0E-38 T 12-10-2018 IPR015144 Type III secretion system effector delivery regulator TyeA M892_04505 8347dde299bccc31ebc2a82fcf835db2 94 SUPERFAMILY SSF140591 3 92 1.1E-31 T 12-10-2018 M892_04505 8347dde299bccc31ebc2a82fcf835db2 94 Gene3D G3DSA:1.20.1280.80 1 92 1.4E-35 T 12-10-2018 IPR038347 TyeA superfamily M892_04505 8347dde299bccc31ebc2a82fcf835db2 94 Pfam PF09059 TyeA 7 86 2.4E-32 T 12-10-2018 IPR015144 Type III secretion system effector delivery regulator TyeA M892_04505 8347dde299bccc31ebc2a82fcf835db2 94 TIGRFAM TIGR02511 type_III_tyeA: type III secretion effector delivery regulator, TyeA family 3 84 5.4E-29 T 12-10-2018 IPR013351 Type III secretion system effector delivery regulator TyeA-related M892_00125 0c50a2d6e33de1f104761903cb83d4e6 149 Gene3D G3DSA:1.10.10.60 52 147 2.1E-14 T 12-10-2018 M892_00125 0c50a2d6e33de1f104761903cb83d4e6 149 SMART SM00342 70 146 1.1E-4 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M892_00125 0c50a2d6e33de1f104761903cb83d4e6 149 Pfam PF12833 Helix-turn-helix domain 76 143 7.8E-14 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M892_27445 a6e238f1d07f48b5db6c721f3516655c 333 Gene3D G3DSA:3.75.10.10 24 321 5.2E-44 T 12-10-2018 M892_27445 a6e238f1d07f48b5db6c721f3516655c 333 SUPERFAMILY SSF55909 27 321 2.13E-37 T 12-10-2018 M892_27445 a6e238f1d07f48b5db6c721f3516655c 333 PIRSF PIRSF028188 8 329 3.5E-154 T 12-10-2018 IPR014541 Predicted amidinotransferase, FN0238 type M892_27445 a6e238f1d07f48b5db6c721f3516655c 333 Pfam PF02274 Amidinotransferase 31 326 1.8E-60 T 12-10-2018 M892_24965 678242731146ad473573dbb4c0118147 123 SUPERFAMILY SSF54427 7 117 2.36E-21 T 12-10-2018 IPR032710 NTF2-like domain superfamily M892_24965 678242731146ad473573dbb4c0118147 123 Pfam PF12680 SnoaL-like domain 15 90 1.8E-8 T 12-10-2018 IPR037401 SnoaL-like domain M892_24965 678242731146ad473573dbb4c0118147 123 Gene3D G3DSA:3.10.450.50 10 118 5.2E-17 T 12-10-2018 M892_26195 1735ad13572056967b2972c7d6e9968e 310 Gene3D G3DSA:3.40.190.10 196 294 2.0E-10 T 12-10-2018 M892_26195 1735ad13572056967b2972c7d6e9968e 310 SUPERFAMILY SSF53850 10 292 1.18E-38 T 12-10-2018 M892_26195 1735ad13572056967b2972c7d6e9968e 310 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 116 291 4.5E-17 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M892_26195 1735ad13572056967b2972c7d6e9968e 310 SMART SM00062 38 294 1.5E-19 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M892_26195 1735ad13572056967b2972c7d6e9968e 310 Gene3D G3DSA:3.40.190.10 24 173 2.3E-21 T 12-10-2018 M892_21865 6ea1869c058f55af7d449571e134bfee 176 Pfam PF01609 Transposase DDE domain 16 149 3.5E-10 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_10815 c8654cb23222d335726995d69755bd5b 185 Pfam PF01300 Telomere recombination 10 185 3.0E-50 T 12-10-2018 IPR006070 YrdC-like domain GO:0003725 M892_10815 c8654cb23222d335726995d69755bd5b 185 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 4 185 4.6E-40 T 12-10-2018 IPR006070 YrdC-like domain GO:0003725 M892_10815 c8654cb23222d335726995d69755bd5b 185 SUPERFAMILY SSF55821 3 182 1.19E-57 T 12-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily M892_10815 c8654cb23222d335726995d69755bd5b 185 Gene3D G3DSA:3.90.870.10 2 183 1.4E-62 T 12-10-2018 M892_10815 c8654cb23222d335726995d69755bd5b 185 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 1 183 41.155 T 12-10-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 M892_23665 43d27d8aea3a563b38f4f567464309d8 317 Gene3D G3DSA:3.40.1030.10 72 312 8.8E-42 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 M892_23665 43d27d8aea3a563b38f4f567464309d8 317 Pfam PF00591 Glycosyl transferase family, a/b domain 97 253 5.2E-6 T 12-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 M892_23665 43d27d8aea3a563b38f4f567464309d8 317 Pfam PF02885 Glycosyl transferase family, helical bundle domain 11 68 7.0E-11 T 12-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 M892_23665 43d27d8aea3a563b38f4f567464309d8 317 SUPERFAMILY SSF52418 73 311 6.12E-44 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 M892_23665 43d27d8aea3a563b38f4f567464309d8 317 SUPERFAMILY SSF47648 8 72 6.41E-15 T 12-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 M892_23665 43d27d8aea3a563b38f4f567464309d8 317 Gene3D G3DSA:1.20.970.10 3 71 9.2E-16 T 12-10-2018 M892_10600 e1777cd6fdcd24eac5dcc1fe7561561f 129 Pfam PF03899 ATP synthase I chain 15 111 7.1E-21 T 12-10-2018 IPR005598 ATP synthase protein I M892_05815 11d9459d0b3e13a2693858990b6e1a52 364 SUPERFAMILY SSF53686 23 336 1.31E-71 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme M892_05815 11d9459d0b3e13a2693858990b6e1a52 364 Gene3D G3DSA:3.40.50.1100 25 324 3.6E-68 T 12-10-2018 M892_05815 11d9459d0b3e13a2693858990b6e1a52 364 Gene3D G3DSA:3.40.50.1100 51 157 3.6E-68 T 12-10-2018 M892_05815 11d9459d0b3e13a2693858990b6e1a52 364 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 32 316 1.5E-41 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme M892_23985 8422e802be83cd763be119fef0947387 329 SUPERFAMILY SSF51556 4 325 2.79E-84 T 12-10-2018 IPR032466 Metal-dependent hydrolase M892_23985 8422e802be83cd763be119fef0947387 329 Gene3D G3DSA:3.20.20.140 1 326 1.1E-93 T 12-10-2018 M892_23985 8422e802be83cd763be119fef0947387 329 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 17 323 3.3E-74 T 12-10-2018 IPR008257 Peptidase M19 GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 M892_27335 0f7787d8a6833c4bd40e33832c99f320 285 Pfam PF04754 Putative transposase, YhgA-like 8 206 1.9E-80 T 12-10-2018 IPR006842 Transposase (putative), YhgA-like M892_27335 0f7787d8a6833c4bd40e33832c99f320 285 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 8 280 3.2E-46 T 12-10-2018 IPR010106 Recombination-promoting nuclease RpnA M892_04855 c64bf5f2c0c031ca0d063862fdea6329 255 SUPERFAMILY SSF56925 34 162 3.14E-8 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel M892_04855 c64bf5f2c0c031ca0d063862fdea6329 255 SUPERFAMILY SSF54106 210 255 3.4E-8 T 12-10-2018 M892_04855 c64bf5f2c0c031ca0d063862fdea6329 255 Pfam PF01476 LysM domain 211 254 3.5E-9 T 12-10-2018 IPR018392 LysM domain M892_04855 c64bf5f2c0c031ca0d063862fdea6329 255 SMART SM00257 210 255 0.002 T 12-10-2018 IPR018392 LysM domain M892_04855 c64bf5f2c0c031ca0d063862fdea6329 255 Gene3D G3DSA:3.10.350.10 203 255 4.9E-12 T 12-10-2018 IPR036779 LysM domain superfamily M892_22795 66abbe0eadca343591206f6479a773d3 381 Pfam PF02486 Replication initiation factor 183 359 7.2E-27 T 12-10-2018 IPR003491 Replication initiation factor GO:0003677|GO:0003916|GO:0006270 M892_08810 9e4606874fdccd8ced7c6093328e9413 286 Pfam PF00226 DnaJ domain 220 280 6.7E-12 T 12-10-2018 IPR001623 DnaJ domain M892_08810 9e4606874fdccd8ced7c6093328e9413 286 Hamap MF_01153 Co-chaperone protein DjlA [djlA]. 3 285 39.386 T 12-10-2018 IPR023749 Co-chaperone DjlA GO:0051087 M892_08810 9e4606874fdccd8ced7c6093328e9413 286 Gene3D G3DSA:1.10.3680.10 45 191 8.8E-27 T 12-10-2018 IPR029024 TerB-like M892_08810 9e4606874fdccd8ced7c6093328e9413 286 PRINTS PR00625 DnaJ domain signature 240 255 6.1E-9 T 12-10-2018 IPR001623 DnaJ domain M892_08810 9e4606874fdccd8ced7c6093328e9413 286 PRINTS PR00625 DnaJ domain signature 264 284 6.1E-9 T 12-10-2018 IPR001623 DnaJ domain M892_08810 9e4606874fdccd8ced7c6093328e9413 286 PRINTS PR00625 DnaJ domain signature 222 240 6.1E-9 T 12-10-2018 IPR001623 DnaJ domain M892_08810 9e4606874fdccd8ced7c6093328e9413 286 SMART SM00271 219 284 9.4E-18 T 12-10-2018 IPR001623 DnaJ domain M892_08810 9e4606874fdccd8ced7c6093328e9413 286 SUPERFAMILY SSF46565 217 280 8.52E-17 T 12-10-2018 IPR036869 Chaperone J-domain superfamily M892_08810 9e4606874fdccd8ced7c6093328e9413 286 Pfam PF05099 Tellurite resistance protein TerB 44 177 4.0E-18 T 12-10-2018 IPR007791 Co-chaperone DjlA, N-terminal M892_08810 9e4606874fdccd8ced7c6093328e9413 286 SUPERFAMILY SSF158682 5 232 3.4E-32 T 12-10-2018 IPR029024 TerB-like M892_08810 9e4606874fdccd8ced7c6093328e9413 286 Gene3D G3DSA:1.10.287.110 195 284 4.4E-16 T 12-10-2018 IPR036869 Chaperone J-domain superfamily M892_25125 97035c05bbd06bb97f97e0629586fed5 90 Pfam PF07383 Protein of unknown function (DUF1496) 35 84 4.3E-22 T 12-10-2018 IPR009971 Protein of unknown function DUF1496 M892_20830 ed4ffdd17a95962f7dbf8c4f31aa8813 305 PIRSF PIRSF009416 1 305 3.6E-175 T 12-10-2018 IPR003157 Acyl transferase, LuxD GO:0006631|GO:0016746 M892_20830 ed4ffdd17a95962f7dbf8c4f31aa8813 305 SUPERFAMILY SSF53474 10 300 1.4E-29 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_20830 ed4ffdd17a95962f7dbf8c4f31aa8813 305 Gene3D G3DSA:3.40.50.1820 1 305 4.5E-85 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_20830 ed4ffdd17a95962f7dbf8c4f31aa8813 305 Hamap MF_00774 Acyl transferase [luxD]. 1 303 64.318 T 12-10-2018 IPR003157 Acyl transferase, LuxD GO:0006631|GO:0016746 M892_20830 ed4ffdd17a95962f7dbf8c4f31aa8813 305 Pfam PF02273 Acyl transferase 6 299 3.8E-175 T 12-10-2018 IPR003157 Acyl transferase, LuxD GO:0006631|GO:0016746 M892_27555 1e62666a4d9ae6ac60b5fa053679e4d7 227 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 61 168 1.6E-13 T 12-10-2018 IPR010319 Transglutaminase-like cysteine peptidase, predicted M892_27555 1e62666a4d9ae6ac60b5fa053679e4d7 227 Gene3D G3DSA:3.10.620.30 26 219 2.7E-73 T 12-10-2018 M892_03195 cd245f134c8933e60a026b3c2357a7bb 405 SUPERFAMILY SSF53098 1 382 5.01E-53 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_03195 cd245f134c8933e60a026b3c2357a7bb 405 Pfam PF01609 Transposase DDE domain 92 327 7.1E-16 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_03615 5f858f4e8da24b9aa6b188d5270812f8 194 Pfam PF13302 Acetyltransferase (GNAT) domain 17 161 5.5E-19 T 12-10-2018 IPR000182 GNAT domain M892_03615 5f858f4e8da24b9aa6b188d5270812f8 194 Gene3D G3DSA:3.40.630.30 14 190 4.4E-46 T 12-10-2018 M892_03615 5f858f4e8da24b9aa6b188d5270812f8 194 SUPERFAMILY SSF55729 14 185 3.42E-40 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_25290 1320161b932528b5fff04369b3980673 419 Pfam PF04932 O-Antigen ligase 179 336 4.0E-13 T 12-10-2018 IPR007016 O-antigen ligase-related M892_08440 c0d83be878e7175d69c22b595a681891 196 Pfam PF13580 SIS domain 9 144 3.2E-33 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 M892_08440 c0d83be878e7175d69c22b595a681891 196 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 34.102 T 12-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 M892_08440 c0d83be878e7175d69c22b595a681891 196 SUPERFAMILY SSF53697 1 191 4.04E-56 T 12-10-2018 M892_08440 c0d83be878e7175d69c22b595a681891 196 Gene3D G3DSA:3.40.50.10490 1 195 9.8E-72 T 12-10-2018 M892_21950 1c7dec8392f6067151b366e16ce4b916 302 Pfam PF13737 Transposase DDE domain 19 131 1.1E-41 T 12-10-2018 IPR025668 Transposase DDE domain M892_05930 497c00e42cf0412864df97ca6bf17ab1 183 TIGRFAM TIGR03902 rhom_GG_sort: rhombosortase 24 171 3.6E-47 T 12-10-2018 IPR023826 Rhomboid-like serine protease, proteobacteria M892_05930 497c00e42cf0412864df97ca6bf17ab1 183 Gene3D G3DSA:1.20.1540.10 1 181 6.0E-22 T 12-10-2018 IPR035952 Rhomboid-like superfamily M892_05930 497c00e42cf0412864df97ca6bf17ab1 183 SUPERFAMILY SSF144091 4 176 6.54E-28 T 12-10-2018 M892_05930 497c00e42cf0412864df97ca6bf17ab1 183 Pfam PF01694 Rhomboid family 34 173 5.4E-15 T 12-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 M892_15800 2f367a417ffba56838e9a0a74cedee1d 94 Pfam PF07023 Protein of unknown function (DUF1315) 4 84 1.0E-28 T 12-10-2018 IPR009749 Protein of unknown function DUF1315 M892_22775 8829d4e21142c94757851c8124b51bfe 122 Gene3D G3DSA:1.10.260.40 3 88 4.8E-6 T 12-10-2018 M892_22775 8829d4e21142c94757851c8124b51bfe 122 Pfam PF12472 Phage related protein 63 119 2.9E-21 T 12-10-2018 IPR021096 Vibrio phage VSK, Orf152 M892_22775 8829d4e21142c94757851c8124b51bfe 122 SUPERFAMILY SSF47413 5 64 4.56E-7 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 M892_08980 afc4a9efd4c1460605b4af1ff47c0f55 76 Pfam PF06526 Protein of unknown function (DUF1107) 12 74 2.9E-25 T 12-10-2018 IPR009491 Protein of unknown function DUF1107 M892_08980 afc4a9efd4c1460605b4af1ff47c0f55 76 Gene3D G3DSA:3.30.1910.10 12 74 1.4E-18 T 12-10-2018 M892_08980 afc4a9efd4c1460605b4af1ff47c0f55 76 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 11 74 2.0E-23 T 12-10-2018 IPR009491 Protein of unknown function DUF1107 M892_12645 0d25af7f8e4f89896812426410a5e4f1 441 Pfam PF00999 Sodium/hydrogen exchanger family 14 416 1.6E-54 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 M892_02045 3fef5ea54f54b4528175d73b7ef9974b 232 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 220 2.6E-8 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M892_02045 3fef5ea54f54b4528175d73b7ef9974b 232 SUPERFAMILY SSF161098 15 222 5.49E-31 T 12-10-2018 IPR035906 MetI-like superfamily M892_02045 3fef5ea54f54b4528175d73b7ef9974b 232 Gene3D G3DSA:1.10.3720.10 2 229 1.4E-27 T 12-10-2018 IPR035906 MetI-like superfamily M892_08805 e6b787f0790263d04c4669ea8472d064 260 Pfam PF04784 Protein of unknown function, DUF547 88 198 4.1E-23 T 12-10-2018 IPR006869 Domain of unknown function DUF547 M892_26065 5dffe82d764b00912fd4639d7a3952f1 326 TIGRFAM TIGR01551 major_capsid_P2: phage major capsid protein, P2 family 12 318 2.2E-91 T 12-10-2018 IPR006441 Bacteriophage P2, GpN, major capsid M892_26065 5dffe82d764b00912fd4639d7a3952f1 326 Pfam PF05125 Phage major capsid protein, P2 family 14 317 6.1E-100 T 12-10-2018 IPR006441 Bacteriophage P2, GpN, major capsid M892_15865 501d961064fffdfbfefae425077c44bb 331 Pfam PF01435 Peptidase family M48 154 329 3.8E-29 T 12-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 M892_15865 501d961064fffdfbfefae425077c44bb 331 Gene3D G3DSA:3.30.2010.10 147 228 3.6E-5 T 12-10-2018 M892_13260 d1b6e1a6df79801cd831c73cc269c4b9 243 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 2 242 2.1E-86 T 12-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 M892_13260 d1b6e1a6df79801cd831c73cc269c4b9 243 Pfam PF04452 RNA methyltransferase 19 236 1.6E-75 T 12-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 M892_13260 d1b6e1a6df79801cd831c73cc269c4b9 243 Gene3D G3DSA:3.40.1280.10 74 243 4.8E-66 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal M892_13260 d1b6e1a6df79801cd831c73cc269c4b9 243 SUPERFAMILY SSF75217 75 242 3.27E-53 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases M892_13260 d1b6e1a6df79801cd831c73cc269c4b9 243 Gene3D G3DSA:2.40.240.20 1 70 1.6E-22 T 12-10-2018 M892_13260 d1b6e1a6df79801cd831c73cc269c4b9 243 PIRSF PIRSF015601 2 242 1.3E-56 T 12-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 M892_13260 d1b6e1a6df79801cd831c73cc269c4b9 243 SUPERFAMILY SSF88697 2 70 1.81E-17 T 12-10-2018 IPR015947 PUA-like superfamily M892_21015 29f066e88231d1e4f6ddb20ad7d30321 138 Pfam PF01478 Type IV leader peptidase family 1 96 2.6E-8 T 12-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 M892_23325 edf2c943935ecb263eba767f3880816f 175 SUPERFAMILY SSF53254 1 160 1.11E-19 T 12-10-2018 IPR029033 Histidine phosphatase superfamily M892_23325 edf2c943935ecb263eba767f3880816f 175 Gene3D G3DSA:3.40.50.1240 1 171 6.5E-20 T 12-10-2018 IPR029033 Histidine phosphatase superfamily M892_23325 edf2c943935ecb263eba767f3880816f 175 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 157 2.1E-15 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 M892_05170 9be9aaefecc683b2947e618567ff8795 322 Pfam PF14397 Sugar-transfer associated ATP-grasp 22 294 1.2E-114 T 12-10-2018 IPR039523 Alpha-L-glutamate ligase-related protein, ATP-grasp domain KEGG: 00270+6.3.2.2+6.3.2.3|KEGG: 00480+6.3.2.2+6.3.2.3|MetaCyc: PWY-6840|MetaCyc: PWY-7255 M892_05170 9be9aaefecc683b2947e618567ff8795 322 SUPERFAMILY SSF56059 36 277 1.54E-19 T 12-10-2018 M892_05170 9be9aaefecc683b2947e618567ff8795 322 TIGRFAM TIGR02291 rimK_rel_E_lig: alpha-L-glutamate ligase homolog 5 319 1.1E-174 T 12-10-2018 IPR011758 Alpha-L-glutamate ligase-related protein M892_22135 2d4254f31ba875d59f787a8b0f450257 198 PIRSF PIRSF011489 1 196 1.2E-82 T 12-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 M892_22135 2d4254f31ba875d59f787a8b0f450257 198 Pfam PF04336 Acyl carrier protein phosphodiesterase 81 185 2.0E-29 T 12-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 M892_19120 967577a387937fe84dac755e28c489f1 373 Pfam PF02563 Polysaccharide biosynthesis/export protein 79 162 1.3E-25 T 12-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 M892_19120 967577a387937fe84dac755e28c489f1 373 Gene3D G3DSA:1.20.5.70 340 373 1.8E-19 T 12-10-2018 M892_19120 967577a387937fe84dac755e28c489f1 373 Gene3D G3DSA:3.30.1950.10 85 166 9.7E-120 T 12-10-2018 M892_19120 967577a387937fe84dac755e28c489f1 373 Gene3D G3DSA:3.10.560.10 63 251 9.7E-120 T 12-10-2018 M892_19120 967577a387937fe84dac755e28c489f1 373 Gene3D G3DSA:3.10.560.10 51 337 9.7E-120 T 12-10-2018 M892_19120 967577a387937fe84dac755e28c489f1 373 Pfam PF10531 SLBB domain 253 302 1.2E-6 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M892_19120 967577a387937fe84dac755e28c489f1 373 Pfam PF10531 SLBB domain 171 217 2.3E-10 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M892_20730 13e4f8993bd555e959a28d6b5b71401b 255 Pfam PF02104 SURF1 family 24 230 1.5E-19 T 12-10-2018 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_19960 73802888764431d33365a8f9dfcc3921 494 Pfam PF08811 Protein of unknown function (DUF1800) 11 491 5.6E-68 T 12-10-2018 IPR014917 Protein of unknown function DUF1800 M892_24425 6837af455f46b0acbb17c0cdbca70af6 157 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 24 59 5.4E-10 T 12-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 M892_24425 6837af455f46b0acbb17c0cdbca70af6 157 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 66 154 3.3E-27 T 12-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain M892_24425 6837af455f46b0acbb17c0cdbca70af6 157 SUPERFAMILY SSF54534 20 156 6.48E-51 T 12-10-2018 M892_24425 6837af455f46b0acbb17c0cdbca70af6 157 Gene3D G3DSA:3.10.50.40 21 157 2.9E-53 T 12-10-2018 M892_26150 57461381dc000a0b58561317ad21ffca 482 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 9 166 9.4E-15 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 M892_26150 57461381dc000a0b58561317ad21ffca 482 SUPERFAMILY SSF52540 59 167 1.09E-5 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_26150 57461381dc000a0b58561317ad21ffca 482 Gene3D G3DSA:3.40.50.300 4 201 9.0E-9 T 12-10-2018 M892_26580 e289178a17195a0d086b9f7086d7c9c4 229 PRINTS PR01008 Flagellar L-ring protein signature 205 219 4.0E-22 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 M892_26580 e289178a17195a0d086b9f7086d7c9c4 229 PRINTS PR01008 Flagellar L-ring protein signature 168 184 4.0E-22 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 M892_26580 e289178a17195a0d086b9f7086d7c9c4 229 PRINTS PR01008 Flagellar L-ring protein signature 74 86 4.0E-22 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 M892_26580 e289178a17195a0d086b9f7086d7c9c4 229 PRINTS PR01008 Flagellar L-ring protein signature 142 157 4.0E-22 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 M892_26580 e289178a17195a0d086b9f7086d7c9c4 229 PRINTS PR01008 Flagellar L-ring protein signature 189 203 4.0E-22 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 M892_26580 e289178a17195a0d086b9f7086d7c9c4 229 Hamap MF_00415 Flagellar L-ring protein [flgH]. 7 226 25.29 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 M892_26580 e289178a17195a0d086b9f7086d7c9c4 229 Pfam PF02107 Flagellar L-ring protein 52 226 2.0E-60 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 M892_19130 e69dc616d876b78c10a9a97e6cb85691 220 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 8 203 4.3E-48 T 12-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 M892_19130 e69dc616d876b78c10a9a97e6cb85691 220 Pfam PF01914 MarC family integral membrane protein 8 207 8.7E-52 T 12-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 M892_05110 31c50bea63d788b4589a4bc095a495b2 378 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 361 8.7E-109 T 12-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 M892_05110 31c50bea63d788b4589a4bc095a495b2 378 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 378 8.6E-173 T 12-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 M892_05110 31c50bea63d788b4589a4bc095a495b2 378 PIRSF PIRSF000267 2 377 4.1E-124 T 12-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 M892_02025 3983b6a008d37057a7a7363870705e93 292 Gene3D G3DSA:2.30.30.60 140 191 1.2E-8 T 12-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily M892_02025 3983b6a008d37057a7a7363870705e93 292 Pfam PF00924 Mechanosensitive ion channel 86 283 1.0E-34 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 M892_02025 3983b6a008d37057a7a7363870705e93 292 SUPERFAMILY SSF82689 197 285 7.06E-7 T 12-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 M892_02025 3983b6a008d37057a7a7363870705e93 292 SUPERFAMILY SSF50182 125 187 1.63E-14 T 12-10-2018 IPR010920 LSM domain superfamily M892_02025 3983b6a008d37057a7a7363870705e93 292 Gene3D G3DSA:3.30.70.100 195 286 3.7E-6 T 12-10-2018 M892_05755 a22b6b5a9c786973ab5b9dc5cc7aa365 408 Pfam PF13005 zinc-finger binding domain of transposase IS66 14 58 1.2E-16 T 12-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 M892_05755 a22b6b5a9c786973ab5b9dc5cc7aa365 408 Pfam PF03050 Transposase IS66 family 78 361 2.5E-101 T 12-10-2018 IPR004291 Transposase, IS66 M892_05755 a22b6b5a9c786973ab5b9dc5cc7aa365 408 Pfam PF13817 IS66 C-terminal element 368 404 5.6E-8 T 12-10-2018 IPR039552 Transposase IS66, C-terminal M892_17100 f3b4ef6566ebdaa6d97147bc527b9400 292 Pfam PF02811 PHP domain 4 112 6.7E-9 T 12-10-2018 IPR004013 PHP domain GO:0003824 M892_17100 f3b4ef6566ebdaa6d97147bc527b9400 292 SUPERFAMILY SSF89550 1 275 8.11E-55 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 M892_17100 f3b4ef6566ebdaa6d97147bc527b9400 292 SMART SM00481 3 70 1.3E-15 T 12-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal M892_17100 f3b4ef6566ebdaa6d97147bc527b9400 292 Gene3D G3DSA:1.10.150.650 98 169 3.2E-82 T 12-10-2018 M892_17100 f3b4ef6566ebdaa6d97147bc527b9400 292 Gene3D G3DSA:3.20.20.140 3 250 3.2E-82 T 12-10-2018 M892_00685 6171bac8c91f1151091651b16ce506ca 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 M892_00685 6171bac8c91f1151091651b16ce506ca 244 Gene3D G3DSA:3.40.50.720 1 241 6.2E-66 T 12-10-2018 M892_00685 6171bac8c91f1151091651b16ce506ca 244 SUPERFAMILY SSF51735 3 240 1.6E-63 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_00685 6171bac8c91f1151091651b16ce506ca 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 7.0E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_00685 6171bac8c91f1151091651b16ce506ca 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 7.0E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_00685 6171bac8c91f1151091651b16ce506ca 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 7.0E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_00685 6171bac8c91f1151091651b16ce506ca 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.6E-30 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_00685 6171bac8c91f1151091651b16ce506ca 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 1.6E-30 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_00685 6171bac8c91f1151091651b16ce506ca 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 1.6E-30 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_00685 6171bac8c91f1151091651b16ce506ca 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 1.6E-30 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_00685 6171bac8c91f1151091651b16ce506ca 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 1.6E-30 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_00685 6171bac8c91f1151091651b16ce506ca 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 1.6E-30 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_00685 6171bac8c91f1151091651b16ce506ca 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 239 2.6E-51 T 12-10-2018 M892_02850 ecd78f5b36d52f324ecf93eb18b115d6 126 SUPERFAMILY SSF55298 2 122 3.77E-24 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 M892_02850 ecd78f5b36d52f324ecf93eb18b115d6 126 Gene3D G3DSA:3.30.1330.40 3 124 5.9E-24 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 M892_02850 ecd78f5b36d52f324ecf93eb18b115d6 126 Pfam PF01042 Endoribonuclease L-PSP 12 121 9.8E-19 T 12-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 M892_13210 d49ac82d10740d4995cecab30e132ff2 143 Gene3D G3DSA:2.60.40.3340 14 143 6.1E-42 T 12-10-2018 M892_13210 d49ac82d10740d4995cecab30e132ff2 143 Pfam PF14467 Domain of unknown function (DUF4426) 23 142 8.3E-50 T 12-10-2018 IPR025218 Domain of unknown function DUF4426 M892_26410 f187f923fdb029bb6d19a92cc5bff73d 169 Pfam PF03748 Flagellar basal body-associated protein FliL 70 169 5.0E-14 T 12-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 M892_09680 7bd69efaba780a57d95d45d8138f1cf7 189 Gene3D G3DSA:3.30.1150.10 90 188 8.5E-21 T 12-10-2018 M892_09680 7bd69efaba780a57d95d45d8138f1cf7 189 SUPERFAMILY SSF74653 101 186 9.16E-18 T 12-10-2018 M892_09680 7bd69efaba780a57d95d45d8138f1cf7 189 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 113 188 3.1E-12 T 12-10-2018 IPR006260 TonB/TolA, C-terminal M892_09680 7bd69efaba780a57d95d45d8138f1cf7 189 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 109 187 2.1E-16 T 12-10-2018 IPR037682 TonB, C-terminal GO:0055085 M892_18270 e0a59b5bd364e81f08183b754cadc288 377 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 375 6.2E-160 T 12-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 M892_18270 e0a59b5bd364e81f08183b754cadc288 377 Gene3D G3DSA:3.40.50.10350 1 362 2.7E-141 T 12-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold M892_18270 e0a59b5bd364e81f08183b754cadc288 377 PIRSF PIRSF006078 1 376 1.8E-137 T 12-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 M892_18270 e0a59b5bd364e81f08183b754cadc288 377 SUPERFAMILY SSF110738 1 375 1.44E-141 T 12-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 M892_18270 e0a59b5bd364e81f08183b754cadc288 377 Pfam PF02595 Glycerate kinase family 3 374 8.9E-150 T 12-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 M892_18270 e0a59b5bd364e81f08183b754cadc288 377 Gene3D G3DSA:3.90.1510.10 42 276 2.7E-141 T 12-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 M892_19505 05114a05de060f059d50aae5b6cad56c 172 Pfam PF05433 Glycine zipper 2TM domain 68 108 2.7E-9 T 12-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 M892_16035 1f2b8b8b51ba867e2aae5da61ee0e846 60 Pfam PF05509 TraY domain 12 59 7.9E-22 T 12-10-2018 IPR008876 Relaxosome protein TraY GO:0000746|GO:0003677 M892_05555 5d9651a3f73460d4aaf879ad48fdea12 539 SUPERFAMILY SSF51905 101 531 8.42E-37 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_05555 5d9651a3f73460d4aaf879ad48fdea12 539 Gene3D G3DSA:3.50.50.60 86 305 1.3E-90 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_05555 5d9651a3f73460d4aaf879ad48fdea12 539 Gene3D G3DSA:3.50.50.60 471 534 2.3E-15 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_05555 5d9651a3f73460d4aaf879ad48fdea12 539 Gene3D G3DSA:3.30.70.2700 1 81 9.1E-34 T 12-10-2018 M892_05555 5d9651a3f73460d4aaf879ad48fdea12 539 PIRSF PIRSF038984 1 536 1.2E-238 T 12-10-2018 IPR028348 FAD dependent protein M892_17015 af8db0aa3df302b0d4d499418ce9a5ef 303 Gene3D G3DSA:3.40.190.10 93 290 4.5E-72 T 12-10-2018 M892_17015 af8db0aa3df302b0d4d499418ce9a5ef 303 SUPERFAMILY SSF46785 1 112 2.2E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_17015 af8db0aa3df302b0d4d499418ce9a5ef 303 Pfam PF03466 LysR substrate binding domain 89 293 2.0E-41 T 12-10-2018 IPR005119 LysR, substrate-binding M892_17015 af8db0aa3df302b0d4d499418ce9a5ef 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 9.5E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_17015 af8db0aa3df302b0d4d499418ce9a5ef 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 9.5E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_17015 af8db0aa3df302b0d4d499418ce9a5ef 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 9.5E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_17015 af8db0aa3df302b0d4d499418ce9a5ef 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 2.8E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_17015 af8db0aa3df302b0d4d499418ce9a5ef 303 Gene3D G3DSA:3.40.190.10 163 267 4.5E-72 T 12-10-2018 M892_17015 af8db0aa3df302b0d4d499418ce9a5ef 303 Gene3D G3DSA:1.10.10.10 1 92 2.7E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_17015 af8db0aa3df302b0d4d499418ce9a5ef 303 SUPERFAMILY SSF53850 89 296 5.54E-40 T 12-10-2018 M892_14635 ac8561984ca4cdfb0d191d25c81e5e2a 151 Pfam PF11012 Protein of unknown function (DUF2850) 65 142 8.8E-29 T 12-10-2018 IPR021271 Protein of unknown function DUF2850 M892_12900 132a581898ba3298488eb6cac47a51d5 321 Gene3D G3DSA:1.20.1420.30 35 308 7.7E-86 T 12-10-2018 M892_12900 132a581898ba3298488eb6cac47a51d5 321 Pfam PF01699 Sodium/calcium exchanger protein 175 316 2.1E-28 T 12-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 M892_12900 132a581898ba3298488eb6cac47a51d5 321 Pfam PF01699 Sodium/calcium exchanger protein 5 143 2.9E-26 T 12-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 M892_12900 132a581898ba3298488eb6cac47a51d5 321 Gene3D G3DSA:1.20.58.1130 8 206 7.7E-86 T 12-10-2018 M892_12900 132a581898ba3298488eb6cac47a51d5 321 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 3 311 1.8E-81 T 12-10-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 M892_09285 400ca90a2758a9fc50d713f67a92f0d0 120 Pfam PF11333 Protein of unknown function (DUF3135) 16 95 1.2E-33 T 12-10-2018 IPR021482 Protein of unknown function DUF3135 M892_28370 5c86b66b492a456e92187c872268ab85 93 Pfam PF01527 Transposase 3 83 1.2E-9 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 M892_28370 5c86b66b492a456e92187c872268ab85 93 SUPERFAMILY SSF46689 4 91 3.94E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_24255 b77b6bcd36020abcacc134e9650153e8 71 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 15 68 5.0E-8 T 12-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor M892_24255 b77b6bcd36020abcacc134e9650153e8 71 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 4 68 2.7E-31 T 12-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor M892_27195 995b8e746367699260edcffc9cc6aa48 80 SUPERFAMILY SSF143120 1 64 1.7E-10 T 12-10-2018 IPR036165 YefM-like superfamily M892_16585 1d15448072dbe886e17958837bf0ac6e 514 Pfam PF13005 zinc-finger binding domain of transposase IS66 120 164 1.6E-16 T 12-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 M892_16585 1d15448072dbe886e17958837bf0ac6e 514 Pfam PF13817 IS66 C-terminal element 474 510 7.6E-8 T 12-10-2018 IPR039552 Transposase IS66, C-terminal M892_16585 1d15448072dbe886e17958837bf0ac6e 514 Pfam PF13007 Transposase C of IS166 homeodomain 42 112 1.3E-14 T 12-10-2018 IPR024463 Transposase TnpC, homeodomain M892_16585 1d15448072dbe886e17958837bf0ac6e 514 Pfam PF03050 Transposase IS66 family 184 467 1.9E-99 T 12-10-2018 IPR004291 Transposase, IS66 M892_22045 602fce56f082fb26617027496e471084 272 Pfam PF00563 EAL domain 27 255 7.3E-44 T 12-10-2018 IPR001633 EAL domain M892_22045 602fce56f082fb26617027496e471084 272 SUPERFAMILY SSF141868 25 263 1.83E-50 T 12-10-2018 IPR035919 EAL domain superfamily M892_22045 602fce56f082fb26617027496e471084 272 Gene3D G3DSA:3.20.20.450 22 270 8.1E-47 T 12-10-2018 IPR035919 EAL domain superfamily M892_22045 602fce56f082fb26617027496e471084 272 SMART SM00052 13 260 2.2E-12 T 12-10-2018 IPR001633 EAL domain M892_21540 0d586359d097eb3395d2a470c35c0175 183 Pfam PF02794 RTX toxin acyltransferase family 34 136 8.9E-7 T 12-10-2018 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 M892_01020 fdcb60f153353731f7a9c9c066074933 315 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 6 307 47.212 T 12-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 M892_01020 fdcb60f153353731f7a9c9c066074933 315 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 7 298 1.7E-87 T 12-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 M892_01020 fdcb60f153353731f7a9c9c066074933 315 PIRSF PIRSF026649 4 305 1.6E-90 T 12-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 M892_01020 fdcb60f153353731f7a9c9c066074933 315 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 7 307 3.5E-138 T 12-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 M892_14835 fc0706fa4cd688fe4b7e518198e1eea2 528 Pfam PF03806 AbgT putative transporter family 19 526 1.2E-226 T 12-10-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 M892_15395 5829a4e4b0eeb824a26cd652eb67ae01 247 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 45 228 1.6E-85 T 12-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 M892_15395 5829a4e4b0eeb824a26cd652eb67ae01 247 Pfam PF01578 Cytochrome C assembly protein 29 184 2.8E-32 T 12-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 M892_15395 5829a4e4b0eeb824a26cd652eb67ae01 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 100 120 3.8E-65 T 12-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 M892_15395 5829a4e4b0eeb824a26cd652eb67ae01 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 156 182 3.8E-65 T 12-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 M892_15395 5829a4e4b0eeb824a26cd652eb67ae01 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 62 82 3.8E-65 T 12-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 M892_15395 5829a4e4b0eeb824a26cd652eb67ae01 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 121 141 3.8E-65 T 12-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 M892_15395 5829a4e4b0eeb824a26cd652eb67ae01 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 204 228 3.8E-65 T 12-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 M892_15395 5829a4e4b0eeb824a26cd652eb67ae01 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 45 62 3.8E-65 T 12-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 M892_14650 4ef8c6b9039349d9b3791b6a72750396 142 SUPERFAMILY SSF82649 4 141 3.09E-49 T 12-10-2018 M892_14650 4ef8c6b9039349d9b3791b6a72750396 142 Gene3D G3DSA:3.90.1010.10 1 142 1.4E-51 T 12-10-2018 M892_14650 4ef8c6b9039349d9b3791b6a72750396 142 Pfam PF02657 Fe-S metabolism associated domain 21 139 7.8E-47 T 12-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like M892_14650 4ef8c6b9039349d9b3791b6a72750396 142 TIGRFAM TIGR03391 FeS_syn_CsdE: cysteine desulfurase, sulfur acceptor subunit CsdE 7 140 3.4E-47 T 12-10-2018 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE M892_10900 43d4110ec73636e01d459f69dd1d3ae1 646 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 143 594 3.4E-218 T 12-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 M892_10900 43d4110ec73636e01d459f69dd1d3ae1 646 Pfam PF13667 ThiC-associated domain 22 104 3.0E-34 T 12-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 M892_10900 43d4110ec73636e01d459f69dd1d3ae1 646 Pfam PF01964 Radical SAM ThiC family 144 592 1.2E-198 T 12-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 M892_10900 43d4110ec73636e01d459f69dd1d3ae1 646 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 143 596 99.454 T 12-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 M892_10900 43d4110ec73636e01d459f69dd1d3ae1 646 Gene3D G3DSA:3.20.20.540 214 527 2.7E-153 T 12-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 M892_24000 28e664d9f29018e155e8aa7659d59de4 298 SUPERFAMILY SSF46785 2 111 4.97E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_24000 28e664d9f29018e155e8aa7659d59de4 298 Gene3D G3DSA:3.40.190.290 91 296 1.1E-35 T 12-10-2018 M892_24000 28e664d9f29018e155e8aa7659d59de4 298 SUPERFAMILY SSF53850 89 290 2.39E-34 T 12-10-2018 M892_24000 28e664d9f29018e155e8aa7659d59de4 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.8E-14 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_24000 28e664d9f29018e155e8aa7659d59de4 298 Pfam PF03466 LysR substrate binding domain 88 285 3.8E-36 T 12-10-2018 IPR005119 LysR, substrate-binding M892_24000 28e664d9f29018e155e8aa7659d59de4 298 Gene3D G3DSA:1.10.10.10 1 83 5.6E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_13795 55e5785f8b6e0cf235e80f9389d44c09 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 67 8.1E-13 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M892_13795 55e5785f8b6e0cf235e80f9389d44c09 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 7.4E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M892_13795 55e5785f8b6e0cf235e80f9389d44c09 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 7.4E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M892_13795 55e5785f8b6e0cf235e80f9389d44c09 205 SUPERFAMILY SSF46689 8 84 8.48E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_13795 55e5785f8b6e0cf235e80f9389d44c09 205 Gene3D G3DSA:1.10.357.10 1 205 9.9E-89 T 12-10-2018 M892_13795 55e5785f8b6e0cf235e80f9389d44c09 205 SUPERFAMILY SSF48498 89 197 4.89E-10 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily M892_21610 28466bff742bf1382fa3357e5b643b98 510 SUPERFAMILY SSF53098 167 302 2.78E-6 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_21610 28466bff742bf1382fa3357e5b643b98 510 Pfam PF00665 Integrase core domain 140 267 3.3E-16 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 M892_06610 8c5d719d3057c26cb73ac70b83936255 104 Pfam PF04316 Anti-sigma-28 factor, FlgM 41 94 2.7E-18 T 12-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal M892_06610 8c5d719d3057c26cb73ac70b83936255 104 SUPERFAMILY SSF101498 2 97 4.32E-22 T 12-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily M892_06610 8c5d719d3057c26cb73ac70b83936255 104 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 4 97 2.3E-23 T 12-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 M892_08570 92a8a2c0ab444b7f61b72b81f0ecded1 419 Pfam PF01384 Phosphate transporter family 26 407 2.2E-112 T 12-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 M892_20085 84ed594bca95da81cea324229a1a6b9d 135 SUPERFAMILY SSF110997 44 109 1.24E-5 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 M892_20085 84ed594bca95da81cea324229a1a6b9d 135 Gene3D G3DSA:3.30.70.1070 32 126 2.3E-20 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 M892_20085 84ed594bca95da81cea324229a1a6b9d 135 Pfam PF05036 Sporulation related domain 44 118 8.4E-13 T 12-10-2018 IPR007730 Sporulation-like domain GO:0042834 M892_28430 1620fd9aa91c03dd77bf4786707c87d1 345 Pfam PF03773 Predicted permease 11 341 1.3E-58 T 12-10-2018 IPR005524 Predicted permease DUF318 M892_08215 68a9f972ee80317b5962362d9058e1b5 156 PIRSF PIRSF028680 1 156 9.1E-75 T 12-10-2018 IPR016895 Uncharacterised conserved protein UCP028680 M892_08215 68a9f972ee80317b5962362d9058e1b5 156 SUPERFAMILY SSF56935 44 156 3.04E-5 T 12-10-2018 M892_17290 21ad7bf5f976b1c947f1d38f68c7014a 460 Gene3D G3DSA:1.10.760.10 317 460 3.0E-8 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M892_17290 21ad7bf5f976b1c947f1d38f68c7014a 460 PIRSF PIRSF028099 5 460 4.6E-183 T 12-10-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase M892_17290 21ad7bf5f976b1c947f1d38f68c7014a 460 SUPERFAMILY SSF46626 319 460 1.0E-22 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M892_17290 21ad7bf5f976b1c947f1d38f68c7014a 460 Pfam PF06537 Di-haem oxidoreductase, putative peroxidase 22 460 1.0E-143 T 12-10-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase M892_25795 1d84b8b0ff5edc150163e2d2099d5222 115 SUPERFAMILY SSF47413 8 87 2.17E-18 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 M892_25795 1d84b8b0ff5edc150163e2d2099d5222 115 Gene3D G3DSA:1.10.260.40 3 84 2.4E-10 T 12-10-2018 M892_02175 e471072b744d1c42a36201ed5b0454a7 338 Pfam PF11279 Protein of unknown function (DUF3080) 31 334 1.5E-83 T 12-10-2018 IPR021431 Protein of unknown function DUF3080 M892_22080 0749f4e7346a335fe9481d3ade38d8ef 293 SUPERFAMILY SSF46689 193 243 1.58E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_22080 0749f4e7346a335fe9481d3ade38d8ef 293 SUPERFAMILY SSF46689 245 292 1.99E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_22080 0749f4e7346a335fe9481d3ade38d8ef 293 Gene3D G3DSA:1.10.10.60 188 293 2.0E-27 T 12-10-2018 M892_22080 0749f4e7346a335fe9481d3ade38d8ef 293 Pfam PF06719 AraC-type transcriptional regulator N-terminus 27 180 8.8E-36 T 12-10-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal M892_22080 0749f4e7346a335fe9481d3ade38d8ef 293 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 246 288 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 M892_22080 0749f4e7346a335fe9481d3ade38d8ef 293 Pfam PF12833 Helix-turn-helix domain 215 292 4.7E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M892_22080 0749f4e7346a335fe9481d3ade38d8ef 293 SMART SM00342 209 292 2.3E-26 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M892_05485 d2241397bd270cb1938676f2d6c347ed 182 Gene3D G3DSA:3.40.630.30 1 178 7.4E-47 T 12-10-2018 M892_05485 d2241397bd270cb1938676f2d6c347ed 182 Pfam PF13302 Acetyltransferase (GNAT) domain 11 152 8.6E-23 T 12-10-2018 IPR000182 GNAT domain M892_05485 d2241397bd270cb1938676f2d6c347ed 182 SUPERFAMILY SSF55729 3 177 8.47E-44 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_14125 ac8f72c46cf8fe7cfcb26171a22a5aa3 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.574 T 12-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_14125 ac8f72c46cf8fe7cfcb26171a22a5aa3 89 Gene3D G3DSA:1.10.287.10 2 89 6.3E-35 T 12-10-2018 M892_14125 ac8f72c46cf8fe7cfcb26171a22a5aa3 89 SUPERFAMILY SSF47060 3 89 1.21E-34 T 12-10-2018 IPR009068 S15/NS1, RNA-binding M892_14125 ac8f72c46cf8fe7cfcb26171a22a5aa3 89 SMART SM01387 8 88 4.4E-52 T 12-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_14125 ac8f72c46cf8fe7cfcb26171a22a5aa3 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 2.0E-29 T 12-10-2018 M892_14125 ac8f72c46cf8fe7cfcb26171a22a5aa3 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 9.4E-39 T 12-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_14125 ac8f72c46cf8fe7cfcb26171a22a5aa3 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 12-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_14125 ac8f72c46cf8fe7cfcb26171a22a5aa3 89 Pfam PF00312 Ribosomal protein S15 8 88 5.5E-36 T 12-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_09370 987042c37881c9ffae2f18baedba3a66 309 Gene3D G3DSA:3.40.50.2000 53 133 4.6E-10 T 12-10-2018 M892_09370 987042c37881c9ffae2f18baedba3a66 309 SUPERFAMILY SSF53756 6 284 3.98E-17 T 12-10-2018 M892_09370 987042c37881c9ffae2f18baedba3a66 309 Gene3D G3DSA:3.40.50.2000 134 259 4.6E-10 T 12-10-2018 M892_26655 8654750b929122f5fc1265cf2ce43d8b 456 SUPERFAMILY SSF143548 16 154 3.14E-43 T 12-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 M892_26655 8654750b929122f5fc1265cf2ce43d8b 456 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 3 448 5.9E-200 T 12-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 M892_26655 8654750b929122f5fc1265cf2ce43d8b 456 Gene3D G3DSA:3.30.1330.90 10 157 1.2E-49 T 12-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 M892_26655 8654750b929122f5fc1265cf2ce43d8b 456 Pfam PF03313 Serine dehydratase alpha chain 184 447 1.7E-95 T 12-10-2018 IPR005130 Serine dehydratase-like, alpha subunit M892_26655 8654750b929122f5fc1265cf2ce43d8b 456 Pfam PF03315 Serine dehydratase beta chain 3 152 2.2E-52 T 12-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 M892_03885 dc7a4fc9447da05a941acb729d43e16c 404 Pfam PF11449 Putative, 10TM heavy-metal exporter 41 402 1.6E-162 T 12-10-2018 IPR021552 Putative, 10TM heavy-metal exporter M892_20960 7e9b19e9793b6f4e3522a5e7484b4cc7 640 Pfam PF09614 CRISPR-associated protein (Cas_Csy2) 388 458 6.6E-15 T 12-10-2018 IPR013398 CRISPR-associated protein Csy2 M892_08960 71ccff442d4326e4529410d1f66269be 115 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 5 112 6.0E-25 T 12-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like M892_08960 71ccff442d4326e4529410d1f66269be 115 SUPERFAMILY SSF110857 3 114 1.44E-32 T 12-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily M892_08960 71ccff442d4326e4529410d1f66269be 115 Gene3D G3DSA:3.10.490.10 4 115 3.2E-39 T 12-10-2018 M892_13650 cf68a65237ff7ed842c765431d26cb78 153 ProDom PD085709 MEMBRANE RP436 UNCHARACTERIZED INTEGRAL PREDICTED TRANSMEMBRANE 24 126 0.004 T 12-10-2018 IPR020143 Uncharacterised protein family, RP436 M892_13650 cf68a65237ff7ed842c765431d26cb78 153 Pfam PF09335 SNARE associated Golgi protein 53 146 3.6E-10 T 12-10-2018 IPR032816 SNARE associated Golgi protein M892_19935 04ec61b1ea25b4df69a67c52041c80b5 87 Gene3D G3DSA:1.20.58.660 19 87 9.7E-15 T 12-10-2018 M892_19935 04ec61b1ea25b4df69a67c52041c80b5 87 Pfam PF04325 Protein of unknown function (DUF465) 37 81 2.7E-11 T 12-10-2018 IPR007420 Protein of unknown function DUF465 M892_26405 64379b123a192b22679fdaf4e3034555 351 Gene3D G3DSA:3.30.750.140 207 324 2.7E-22 T 12-10-2018 IPR038610 FliK-like, C-terminal domain superfamily M892_26405 64379b123a192b22679fdaf4e3034555 351 Pfam PF02120 Flagellar hook-length control protein FliK 231 312 2.3E-20 T 12-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal M892_00465 2fb32b9feaece256c8110e1a7d6bdc29 319 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 300 8.0E-45 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 M892_00465 2fb32b9feaece256c8110e1a7d6bdc29 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 1.1E-75 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 M892_00465 2fb32b9feaece256c8110e1a7d6bdc29 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 1.1E-75 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 M892_00465 2fb32b9feaece256c8110e1a7d6bdc29 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 1.1E-75 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 M892_00465 2fb32b9feaece256c8110e1a7d6bdc29 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 1.1E-75 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 M892_00465 2fb32b9feaece256c8110e1a7d6bdc29 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 1.1E-75 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 M892_00465 2fb32b9feaece256c8110e1a7d6bdc29 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 1.1E-75 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 M892_00465 2fb32b9feaece256c8110e1a7d6bdc29 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 1.1E-75 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 M892_00465 2fb32b9feaece256c8110e1a7d6bdc29 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 1.1E-75 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 M892_00465 2fb32b9feaece256c8110e1a7d6bdc29 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 1.1E-75 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 M892_00465 2fb32b9feaece256c8110e1a7d6bdc29 319 SUPERFAMILY SSF51905 2 313 3.61E-51 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_00465 2fb32b9feaece256c8110e1a7d6bdc29 319 Gene3D G3DSA:3.50.50.60 118 244 2.0E-126 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_00465 2fb32b9feaece256c8110e1a7d6bdc29 319 Gene3D G3DSA:3.50.50.60 10 312 2.0E-126 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_00465 2fb32b9feaece256c8110e1a7d6bdc29 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 4.1E-38 T 12-10-2018 M892_00465 2fb32b9feaece256c8110e1a7d6bdc29 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 4.1E-38 T 12-10-2018 M892_00465 2fb32b9feaece256c8110e1a7d6bdc29 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 4.1E-38 T 12-10-2018 M892_00465 2fb32b9feaece256c8110e1a7d6bdc29 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 4.1E-38 T 12-10-2018 M892_00465 2fb32b9feaece256c8110e1a7d6bdc29 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 4.1E-38 T 12-10-2018 M892_00465 2fb32b9feaece256c8110e1a7d6bdc29 319 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 313 4.2E-123 T 12-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 M892_00465 2fb32b9feaece256c8110e1a7d6bdc29 319 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 12-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 M892_23660 ed4ec0e4872ea36f0d6c41d10237872a 305 Pfam PF01738 Dienelactone hydrolase family 92 301 1.4E-46 T 12-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 M892_23660 ed4ec0e4872ea36f0d6c41d10237872a 305 Gene3D G3DSA:3.40.50.1820 64 302 1.6E-59 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_23660 ed4ec0e4872ea36f0d6c41d10237872a 305 SUPERFAMILY SSF53474 78 302 2.96E-42 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_25680 a5b5fd5db2a294941db0f6d0f1b18f1f 296 SUPERFAMILY SSF103481 222 294 3.4E-7 T 12-10-2018 M892_25680 a5b5fd5db2a294941db0f6d0f1b18f1f 296 SUPERFAMILY SSF103481 42 143 1.44E-9 T 12-10-2018 M892_25680 a5b5fd5db2a294941db0f6d0f1b18f1f 296 Pfam PF00892 EamA-like transporter family 152 295 2.2E-12 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M892_25680 a5b5fd5db2a294941db0f6d0f1b18f1f 296 Pfam PF00892 EamA-like transporter family 4 139 4.0E-18 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M892_28710 b048b2be50b4906515137fbf0a532561 399 Pfam PF13614 AAA domain 107 277 1.5E-26 T 12-10-2018 IPR025669 AAA domain M892_28710 b048b2be50b4906515137fbf0a532561 399 SUPERFAMILY SSF52540 106 361 3.38E-33 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_28710 b048b2be50b4906515137fbf0a532561 399 Gene3D G3DSA:3.40.50.300 106 394 8.3E-54 T 12-10-2018 M892_09475 306f5b5d867e3cc3784e8ec6d18e3e08 338 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 108 184 1.3E-21 T 12-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 M892_09475 306f5b5d867e3cc3784e8ec6d18e3e08 338 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 245 334 1.3E-29 T 12-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 M892_09475 306f5b5d867e3cc3784e8ec6d18e3e08 338 Gene3D G3DSA:3.40.47.10 1 337 3.5E-110 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M892_09475 306f5b5d867e3cc3784e8ec6d18e3e08 338 SUPERFAMILY SSF53901 4 334 7.91E-52 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M892_25320 958157e1808c0f9a50ece2c5fefbda8c 195 Gene3D G3DSA:1.10.357.10 1 194 4.5E-60 T 12-10-2018 M892_25320 958157e1808c0f9a50ece2c5fefbda8c 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 56 8.0E-12 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M892_25320 958157e1808c0f9a50ece2c5fefbda8c 195 Pfam PF16925 Bacterial transcriptional repressor C-terminal 103 181 8.9E-9 T 12-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal M892_25320 958157e1808c0f9a50ece2c5fefbda8c 195 SUPERFAMILY SSF46689 2 73 1.44E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_25320 958157e1808c0f9a50ece2c5fefbda8c 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 2.7E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M892_25320 958157e1808c0f9a50ece2c5fefbda8c 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 2.7E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M892_25320 958157e1808c0f9a50ece2c5fefbda8c 195 SUPERFAMILY SSF48498 79 192 1.44E-20 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily M892_25980 d12332fc255b237d6664ebe3685130b5 268 Pfam PF12571 Phage tail-collar fibre protein 2 157 3.4E-33 T 12-10-2018 IPR022225 Phage tail fibre protein M892_21565 21562675261ae9f2268852cc64c6c13d 161 SUPERFAMILY SSF51283 1 143 8.72E-29 T 12-10-2018 IPR036157 dUTPase-like superfamily M892_21565 21562675261ae9f2268852cc64c6c13d 161 Gene3D G3DSA:2.70.40.10 1 153 7.1E-30 T 12-10-2018 IPR036157 dUTPase-like superfamily M892_01815 1fe289a393c54975af15ac4054fdbd38 381 Pfam PF02486 Replication initiation factor 183 359 1.1E-28 T 12-10-2018 IPR003491 Replication initiation factor GO:0003677|GO:0003916|GO:0006270 M892_22070 b5647352640eee9f30b64a8f669f56cf 212 Pfam PF07947 YhhN family 24 203 7.8E-38 T 12-10-2018 IPR012506 YhhN-like GO:0016021 M892_18920 e4656094995e876e5561eab2610f85fe 135 SUPERFAMILY SSF54403 48 116 2.43E-9 T 12-10-2018 M892_04445 f829cfbab0171569eff4654bdbb1bd1d 265 Pfam PF08241 Methyltransferase domain 46 144 2.0E-14 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 M892_04445 f829cfbab0171569eff4654bdbb1bd1d 265 Gene3D G3DSA:3.40.50.150 14 264 1.2E-37 T 12-10-2018 M892_04445 f829cfbab0171569eff4654bdbb1bd1d 265 SUPERFAMILY SSF53335 30 263 4.04E-30 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M892_09665 c9309aea624b3a4edb0db5fb93f02938 453 PIRSF PIRSF037714 2 453 3.6E-170 T 12-10-2018 IPR017270 Putative MotA/TolQ/ExbB family protein M892_09665 c9309aea624b3a4edb0db5fb93f02938 453 Pfam PF01618 MotA/TolQ/ExbB proton channel family 317 434 2.4E-28 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel M892_08660 68f20dca7a41be1fbe5bf4d5aaa4e22b 514 Pfam PF03050 Transposase IS66 family 184 467 2.3E-101 T 12-10-2018 IPR004291 Transposase, IS66 M892_08660 68f20dca7a41be1fbe5bf4d5aaa4e22b 514 Pfam PF13005 zinc-finger binding domain of transposase IS66 120 164 1.6E-16 T 12-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 M892_08660 68f20dca7a41be1fbe5bf4d5aaa4e22b 514 Pfam PF13007 Transposase C of IS166 homeodomain 42 112 2.2E-14 T 12-10-2018 IPR024463 Transposase TnpC, homeodomain M892_08660 68f20dca7a41be1fbe5bf4d5aaa4e22b 514 Pfam PF13817 IS66 C-terminal element 474 510 7.6E-8 T 12-10-2018 IPR039552 Transposase IS66, C-terminal M892_08965 c052fb0ebc341fcdca26b332a2d163f0 1290 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 955 1289 5.6E-66 T 12-10-2018 IPR007452 Translocation and assembly module TamB M892_27150 d8e89bfe53ea7ff6fe63e0636d5b423e 111 Pfam PF11730 Protein of unknown function (DUF3297) 40 110 3.2E-37 T 12-10-2018 IPR021724 Protein of unknown function DUF3297 M892_02865 2d5b55f050d7ffafc944dc34f3d998e0 215 Pfam PF05717 IS66 Orf2 like protein 107 201 1.1E-31 T 12-10-2018 IPR008878 Transposase IS66, Orf2 M892_16190 2d5b55f050d7ffafc944dc34f3d998e0 215 Pfam PF05717 IS66 Orf2 like protein 107 201 1.1E-31 T 12-10-2018 IPR008878 Transposase IS66, Orf2 M892_18185 5cfc2d6083be492f045464a0bdc93b02 102 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 30 88 5.0E-12 T 12-10-2018 IPR018660 C-type lysozyme inhibitor M892_18185 5cfc2d6083be492f045464a0bdc93b02 102 Gene3D G3DSA:2.40.128.200 26 102 4.9E-15 T 12-10-2018 IPR036328 C-type lysozyme inhibitor superfamily M892_18185 5cfc2d6083be492f045464a0bdc93b02 102 SUPERFAMILY SSF141488 25 100 1.57E-14 T 12-10-2018 IPR036328 C-type lysozyme inhibitor superfamily M892_26480 2c094be6be6c15888a8d83e9b9c93e72 133 SUPERFAMILY SSF51316 2 132 1.88E-42 T 12-10-2018 IPR011057 Mss4-like superfamily M892_26480 2c094be6be6c15888a8d83e9b9c93e72 133 Gene3D G3DSA:3.90.1590.10 1 121 2.5E-20 T 12-10-2018 M892_26480 2c094be6be6c15888a8d83e9b9c93e72 133 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 26 112 5.1E-19 T 12-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 M892_11115 ec24a68e226ed7be5c9baa30640ba3a6 242 Gene3D G3DSA:3.40.50.10090 32 161 2.7E-68 T 12-10-2018 M892_11115 ec24a68e226ed7be5c9baa30640ba3a6 242 Pfam PF02602 Uroporphyrinogen-III synthase HemD 15 236 1.9E-33 T 12-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 M892_11115 ec24a68e226ed7be5c9baa30640ba3a6 242 SUPERFAMILY SSF69618 1 241 6.93E-50 T 12-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 M892_11115 ec24a68e226ed7be5c9baa30640ba3a6 242 Gene3D G3DSA:3.40.50.10090 4 240 2.7E-68 T 12-10-2018 M892_05450 9964d3c8b2de65fd5941a0ae22f0928c 169 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 23 164 9.2E-46 T 12-10-2018 IPR018639 Domain of unknown function DUF2062 M892_10500 a6c0e6123391712cbc53bffd36eb0d6a 693 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 2 691 25.864 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 M892_10500 a6c0e6123391712cbc53bffd36eb0d6a 693 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 245 260 1.7E-35 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 M892_10500 a6c0e6123391712cbc53bffd36eb0d6a 693 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 49 61 1.7E-35 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 M892_10500 a6c0e6123391712cbc53bffd36eb0d6a 693 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 398 417 1.7E-35 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 M892_10500 a6c0e6123391712cbc53bffd36eb0d6a 693 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 322 338 1.7E-35 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 M892_10500 a6c0e6123391712cbc53bffd36eb0d6a 693 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 6 19 1.7E-35 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 M892_10500 a6c0e6123391712cbc53bffd36eb0d6a 693 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 5 554 1.6E-204 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 M892_10500 a6c0e6123391712cbc53bffd36eb0d6a 693 SUPERFAMILY SSF109604 356 494 6.59E-12 T 12-10-2018 M892_10500 a6c0e6123391712cbc53bffd36eb0d6a 693 Pfam PF05746 DALR anticodon binding domain 585 682 4.3E-10 T 12-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 M892_10500 a6c0e6123391712cbc53bffd36eb0d6a 693 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 3 692 2.1E-294 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 M892_01565 4384d9824b608903c0c7fcbaaafbf98d 78 Pfam PF00708 Acylphosphatase 4 77 9.8E-19 T 12-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 M892_01565 4384d9824b608903c0c7fcbaaafbf98d 78 SUPERFAMILY SSF54975 3 77 1.02E-21 T 12-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 M892_01565 4384d9824b608903c0c7fcbaaafbf98d 78 ProSitePatterns PS00151 Acylphosphatase signature 2. 22 38 - T 12-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 M892_01565 4384d9824b608903c0c7fcbaaafbf98d 78 Gene3D G3DSA:3.30.70.100 2 78 4.0E-23 T 12-10-2018 M892_04125 821c5aff90d897552e3f9a30e977feec 268 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 14 268 32.488 T 12-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 M892_04125 821c5aff90d897552e3f9a30e977feec 268 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 22 268 1.0E-68 T 12-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 M892_04125 821c5aff90d897552e3f9a30e977feec 268 Pfam PF08241 Methyltransferase domain 58 148 1.5E-26 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 M892_04125 821c5aff90d897552e3f9a30e977feec 268 Gene3D G3DSA:3.40.50.150 7 268 1.6E-41 T 12-10-2018 M892_04125 821c5aff90d897552e3f9a30e977feec 268 SUPERFAMILY SSF53335 20 205 8.97E-45 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M892_24570 acd3086994f6a671bc2c38f96860a01a 222 Pfam PF08239 Bacterial SH3 domain 74 128 1.8E-6 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type M892_06715 12847f5c1732c5a4798df888d98d5085 46 Pfam PF11346 Protein of unknown function (DUF3149) 4 43 2.3E-16 T 12-10-2018 IPR021494 Protein of unknown function DUF3149 M892_20225 0543e87cb6c8f176b4fadd081ce49157 435 SUPERFAMILY SSF53850 20 424 5.67E-72 T 12-10-2018 M892_20225 0543e87cb6c8f176b4fadd081ce49157 435 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 139 156 - T 12-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 M892_20225 0543e87cb6c8f176b4fadd081ce49157 435 Pfam PF13416 Bacterial extracellular solute-binding protein 42 365 1.0E-40 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein M892_20225 0543e87cb6c8f176b4fadd081ce49157 435 Gene3D G3DSA:3.40.190.10 28 381 2.7E-131 T 12-10-2018 M892_20225 0543e87cb6c8f176b4fadd081ce49157 435 Gene3D G3DSA:3.40.190.10 144 421 2.7E-131 T 12-10-2018 M892_07690 250b3bdb4ba1ec5425f9ff65403cb537 154 Pfam PF00571 CBS domain 85 133 5.3E-9 T 12-10-2018 IPR000644 CBS domain M892_07690 250b3bdb4ba1ec5425f9ff65403cb537 154 Pfam PF00571 CBS domain 10 64 1.3E-11 T 12-10-2018 IPR000644 CBS domain M892_07690 250b3bdb4ba1ec5425f9ff65403cb537 154 SUPERFAMILY SSF54631 7 138 6.06E-32 T 12-10-2018 M892_07690 250b3bdb4ba1ec5425f9ff65403cb537 154 Gene3D G3DSA:3.10.580.10 5 154 3.8E-48 T 12-10-2018 M892_07690 250b3bdb4ba1ec5425f9ff65403cb537 154 SMART SM00116 17 65 1.6E-7 T 12-10-2018 IPR000644 CBS domain M892_07690 250b3bdb4ba1ec5425f9ff65403cb537 154 SMART SM00116 90 137 5.3E-6 T 12-10-2018 IPR000644 CBS domain M892_26635 c627e7a08aafc5b3a82412dfdc67ebd2 172 SUPERFAMILY SSF55811 23 142 1.3E-18 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 M892_26635 c627e7a08aafc5b3a82412dfdc67ebd2 172 Gene3D G3DSA:3.90.79.10 13 151 9.5E-24 T 12-10-2018 M892_26635 c627e7a08aafc5b3a82412dfdc67ebd2 172 Pfam PF00293 NUDIX domain 23 145 1.1E-13 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 M892_06080 7296df74d431da464cd7aaf0ff0f45ea 535 Pfam PF13489 Methyltransferase domain 9 136 2.6E-10 T 12-10-2018 M892_06080 7296df74d431da464cd7aaf0ff0f45ea 535 Gene3D G3DSA:3.40.50.150 2 161 4.7E-22 T 12-10-2018 M892_06080 7296df74d431da464cd7aaf0ff0f45ea 535 Pfam PF13395 HNH endonuclease 426 464 2.8E-5 T 12-10-2018 IPR003615 HNH nuclease M892_06080 7296df74d431da464cd7aaf0ff0f45ea 535 SUPERFAMILY SSF53335 8 149 3.22E-22 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M892_16405 7a595d594db9287ee41dba4ab3965933 353 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 18 347 1.6E-106 T 12-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 M892_16405 7a595d594db9287ee41dba4ab3965933 353 Pfam PF02504 Fatty acid synthesis protein 17 339 1.7E-101 T 12-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 M892_16405 7a595d594db9287ee41dba4ab3965933 353 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 352 135.628 T 12-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 M892_16405 7a595d594db9287ee41dba4ab3965933 353 Gene3D G3DSA:3.40.718.10 14 352 1.5E-121 T 12-10-2018 M892_16405 7a595d594db9287ee41dba4ab3965933 353 PIRSF PIRSF002465 14 351 1.2E-124 T 12-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 M892_16405 7a595d594db9287ee41dba4ab3965933 353 SUPERFAMILY SSF53659 16 348 9.05E-104 T 12-10-2018 M892_16100 425ed231b449476658eb15a00005cbe7 514 Pfam PF13005 zinc-finger binding domain of transposase IS66 120 164 1.6E-16 T 12-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 M892_16100 425ed231b449476658eb15a00005cbe7 514 Pfam PF03050 Transposase IS66 family 184 467 2.0E-101 T 12-10-2018 IPR004291 Transposase, IS66 M892_16100 425ed231b449476658eb15a00005cbe7 514 Pfam PF13817 IS66 C-terminal element 474 510 1.1E-7 T 12-10-2018 IPR039552 Transposase IS66, C-terminal M892_16100 425ed231b449476658eb15a00005cbe7 514 Pfam PF13007 Transposase C of IS166 homeodomain 42 112 2.2E-14 T 12-10-2018 IPR024463 Transposase TnpC, homeodomain M892_17945 fa3797c94e00e0237b768e3d59c28435 334 SUPERFAMILY SSF47413 2 59 3.58E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 M892_17945 fa3797c94e00e0237b768e3d59c28435 334 Gene3D G3DSA:3.40.50.2300 62 307 1.2E-85 T 12-10-2018 M892_17945 fa3797c94e00e0237b768e3d59c28435 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.3E-18 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M892_17945 fa3797c94e00e0237b768e3d59c28435 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 6.2E-6 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M892_17945 fa3797c94e00e0237b768e3d59c28435 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 6.2E-6 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M892_17945 fa3797c94e00e0237b768e3d59c28435 334 SUPERFAMILY SSF53822 61 329 6.71E-87 T 12-10-2018 IPR028082 Periplasmic binding protein-like I M892_17945 fa3797c94e00e0237b768e3d59c28435 334 Gene3D G3DSA:1.10.260.40 1 59 1.5E-22 T 12-10-2018 M892_17945 fa3797c94e00e0237b768e3d59c28435 334 Pfam PF13377 Periplasmic binding protein-like domain 168 328 9.1E-37 T 12-10-2018 M892_17945 fa3797c94e00e0237b768e3d59c28435 334 SMART SM00354 1 71 1.1E-28 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M892_17945 fa3797c94e00e0237b768e3d59c28435 334 Gene3D G3DSA:3.40.50.2300 160 289 1.2E-85 T 12-10-2018 M892_04290 70eb8c7fc13185f21852483f82332506 129 Pfam PF01548 Transposase 8 128 7.1E-12 T 12-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 M892_03700 2e1a1af50152f80832e55d243fa83a37 106 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 25 106 2.8E-26 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M892_03700 2e1a1af50152f80832e55d243fa83a37 106 Gene3D G3DSA:1.10.287.950 1 106 1.6E-33 T 12-10-2018 M892_03700 2e1a1af50152f80832e55d243fa83a37 106 SUPERFAMILY SSF58104 8 106 1.57E-34 T 12-10-2018 M892_03185 64cc93bac8eba526f64186d2af83a76d 490 SUPERFAMILY SSF56672 80 406 1.5E-49 T 12-10-2018 M892_03185 64cc93bac8eba526f64186d2af83a76d 490 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 60 403 3.7E-108 T 12-10-2018 IPR030931 Group II intron reverse transcriptase/maturase M892_03185 64cc93bac8eba526f64186d2af83a76d 490 Pfam PF08388 Group II intron, maturase-specific domain 341 416 2.0E-23 T 12-10-2018 IPR013597 Group II intron, maturase-specific M892_03185 64cc93bac8eba526f64186d2af83a76d 490 Pfam PF13655 N-terminal domain of reverse transcriptase 16 97 2.5E-31 T 12-10-2018 IPR025960 Reverse transcriptase, N-terminal domain M892_03185 64cc93bac8eba526f64186d2af83a76d 490 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 112 321 1.7E-41 T 12-10-2018 IPR000477 Reverse transcriptase domain M892_04580 4dbf19158728d95b89aa30d01c856fed 137 SUPERFAMILY SSF53098 27 124 1.14E-8 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_04580 4dbf19158728d95b89aa30d01c856fed 137 Gene3D G3DSA:3.30.420.470 6 132 3.4E-11 T 12-10-2018 M892_04580 4dbf19158728d95b89aa30d01c856fed 137 Pfam PF13358 DDE superfamily endonuclease 2 118 3.9E-28 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_06960 228c74915cad69d917d8aafdd48ec71d 269 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 15 269 4.0E-124 T 12-10-2018 IPR004872 Lipoprotein NlpA family M892_06960 228c74915cad69d917d8aafdd48ec71d 269 Gene3D G3DSA:3.40.190.10 34 263 3.0E-93 T 12-10-2018 M892_06960 228c74915cad69d917d8aafdd48ec71d 269 Gene3D G3DSA:3.40.190.10 115 219 3.0E-93 T 12-10-2018 M892_06960 228c74915cad69d917d8aafdd48ec71d 269 Pfam PF03180 NLPA lipoprotein 33 269 2.3E-97 T 12-10-2018 IPR004872 Lipoprotein NlpA family M892_06960 228c74915cad69d917d8aafdd48ec71d 269 SUPERFAMILY SSF53850 32 269 1.37E-77 T 12-10-2018 M892_06960 228c74915cad69d917d8aafdd48ec71d 269 PIRSF PIRSF002854 1 269 2.7E-98 T 12-10-2018 IPR004872 Lipoprotein NlpA family M892_25585 9f4d4a9073fb27efa6e381d1d3fa1484 190 Pfam PF07603 Protein of unknown function (DUF1566) 42 186 4.3E-22 T 12-10-2018 IPR011460 Protein of unknown function DUF1566 M892_18170 cae15aff7826e83f5f8ac8e268b99951 83 Pfam PF10985 Protein of unknown function (DUF2805) 9 79 2.3E-36 T 12-10-2018 IPR019882 Conserved hypothetical protein CHP03643 M892_18170 cae15aff7826e83f5f8ac8e268b99951 83 TIGRFAM TIGR03643 TIGR03643: TIGR03643 family protein 8 77 1.2E-36 T 12-10-2018 IPR019882 Conserved hypothetical protein CHP03643 M892_10100 49ed24d2d8c70e115cffad585ffa98c2 86 Gene3D G3DSA:2.30.40.20 10 36 1.1E-6 T 12-10-2018 M892_10100 49ed24d2d8c70e115cffad585ffa98c2 86 Pfam PF00817 impB/mucB/samB family 5 52 1.0E-5 T 12-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 M892_10100 49ed24d2d8c70e115cffad585ffa98c2 86 SUPERFAMILY SSF56672 2 38 8.63E-10 T 12-10-2018 M892_24185 1ab505e02cd19ca15f5988ec2c3f90b8 489 SUPERFAMILY SSF141868 247 484 7.98E-70 T 12-10-2018 IPR035919 EAL domain superfamily M892_24185 1ab505e02cd19ca15f5988ec2c3f90b8 489 Pfam PF12792 CSS motif domain associated with EAL 49 151 7.2E-5 T 12-10-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain M892_24185 1ab505e02cd19ca15f5988ec2c3f90b8 489 Pfam PF00563 EAL domain 247 478 5.1E-62 T 12-10-2018 IPR001633 EAL domain M892_24185 1ab505e02cd19ca15f5988ec2c3f90b8 489 Gene3D G3DSA:3.20.20.450 241 488 5.4E-76 T 12-10-2018 IPR035919 EAL domain superfamily M892_24185 1ab505e02cd19ca15f5988ec2c3f90b8 489 SMART SM00052 241 483 1.0E-73 T 12-10-2018 IPR001633 EAL domain M892_12940 83cc031de2c61e884e6338d51564eec1 241 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 180 2.1E-43 T 12-10-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 M892_12940 83cc031de2c61e884e6338d51564eec1 241 Pfam PF01553 Acyltransferase 58 180 3.4E-31 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 M892_12940 83cc031de2c61e884e6338d51564eec1 241 SMART SM00563 67 182 1.1E-40 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 M892_12940 83cc031de2c61e884e6338d51564eec1 241 SUPERFAMILY SSF69593 4 237 2.22E-57 T 12-10-2018 M892_12330 4b228c42558e2729779e63382b9c6f71 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 12-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M892_12330 4b228c42558e2729779e63382b9c6f71 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.865 T 12-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 M892_12330 4b228c42558e2729779e63382b9c6f71 156 PIRSF PIRSF002122 3 156 5.1E-63 T 12-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 M892_12330 4b228c42558e2729779e63382b9c6f71 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 4.1E-71 T 12-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 M892_12330 4b228c42558e2729779e63382b9c6f71 156 Gene3D G3DSA:1.10.455.10 2 155 1.1E-64 T 12-10-2018 IPR036823 Ribosomal protein S7 domain superfamily M892_12330 4b228c42558e2729779e63382b9c6f71 156 SUPERFAMILY SSF47973 6 149 1.7E-59 T 12-10-2018 IPR036823 Ribosomal protein S7 domain superfamily M892_12330 4b228c42558e2729779e63382b9c6f71 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 6.2E-66 T 12-10-2018 IPR023798 Ribosomal protein S7 domain M892_11195 edccd19ca16ec6d359a152c091efba6c 204 PIRSF PIRSF006324 1 204 1.1E-54 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 M892_11195 edccd19ca16ec6d359a152c091efba6c 204 Pfam PF01810 LysE type translocator 15 202 3.7E-33 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 M892_02355 4e713052a5161564443bf7c9e004eee0 187 Pfam PF03729 Short repeat of unknown function (DUF308) 22 92 1.5E-12 T 12-10-2018 IPR005325 Protein of unknown function DUF308, membrane M892_02355 4e713052a5161564443bf7c9e004eee0 187 Pfam PF03729 Short repeat of unknown function (DUF308) 80 147 4.2E-8 T 12-10-2018 IPR005325 Protein of unknown function DUF308, membrane M892_19125 03f8ff929e79ce070032c079bc86b88f 257 Pfam PF00881 Nitroreductase family 25 176 4.4E-23 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 M892_19125 03f8ff929e79ce070032c079bc86b88f 257 PIRSF PIRSF005426 17 257 6.3E-83 T 12-10-2018 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 M892_19125 03f8ff929e79ce070032c079bc86b88f 257 Gene3D G3DSA:3.40.109.10 18 257 8.3E-76 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 M892_19125 03f8ff929e79ce070032c079bc86b88f 257 SUPERFAMILY SSF55469 18 255 2.75E-71 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 M892_10280 d8602e20eb0a779ebb1ae183e9fbe3bc 190 Gene3D G3DSA:1.10.10.10 125 189 1.0E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_10280 d8602e20eb0a779ebb1ae183e9fbe3bc 190 SUPERFAMILY SSF88659 124 187 5.05E-6 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like M892_10280 d8602e20eb0a779ebb1ae183e9fbe3bc 190 TIGRFAM TIGR02999 Sig-70_X6: RNA polymerase sigma factor, TIGR02999 family 5 187 1.3E-56 T 12-10-2018 IPR011517 RNA polymerase sigma-70 ECF-like M892_10280 d8602e20eb0a779ebb1ae183e9fbe3bc 190 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 187 1.2E-16 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 M892_10280 d8602e20eb0a779ebb1ae183e9fbe3bc 190 Pfam PF07638 ECF sigma factor 6 188 1.0E-28 T 12-10-2018 IPR011517 RNA polymerase sigma-70 ECF-like M892_06330 04cdcdaaa25183d16d6ce50134f03758 195 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 28 2.0E-7 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M892_06330 04cdcdaaa25183d16d6ce50134f03758 195 SUPERFAMILY SSF54523 9 119 1.73E-11 T 12-10-2018 M892_06330 04cdcdaaa25183d16d6ce50134f03758 195 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 29 1.2E-5 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M892_06330 04cdcdaaa25183d16d6ce50134f03758 195 Gene3D G3DSA:3.30.700.10 9 194 6.4E-11 T 12-10-2018 M892_03515 6fc687f522da6f38dcb5f63145b6560f 375 Gene3D G3DSA:3.40.91.100 233 370 2.4E-6 T 12-10-2018 M892_03515 6fc687f522da6f38dcb5f63145b6560f 375 SUPERFAMILY SSF52980 252 363 5.25E-13 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 M892_03515 6fc687f522da6f38dcb5f63145b6560f 375 Pfam PF04471 Restriction endonuclease 249 362 4.2E-23 T 12-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 M892_00040 039aafb7c1007e0af8a478a99e82819e 345 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 162 312 1.1E-22 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain M892_00040 039aafb7c1007e0af8a478a99e82819e 345 Pfam PF12793 Sugar transport-related sRNA regulator N-term 6 116 5.7E-26 T 12-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain M892_00040 039aafb7c1007e0af8a478a99e82819e 345 SUPERFAMILY SSF53850 118 309 5.97E-41 T 12-10-2018 M892_00040 039aafb7c1007e0af8a478a99e82819e 345 Gene3D G3DSA:3.40.190.10 105 313 1.9E-32 T 12-10-2018 M892_17730 5d599754b5bd8fe3d4e9dc1992208da5 202 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 11 186 1.4E-29 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT M892_26135 58c74c6c6b0f4c079eb9876164307c2d 181 Pfam PF06892 Phage regulatory protein CII (CP76) 12 171 6.3E-55 T 12-10-2018 IPR009679 Bacteriophage 186, CII M892_03325 c9a2f03990e12e9f5607e176281f44c8 113 Pfam PF02924 Bacteriophage lambda head decoration protein D 2 103 7.6E-13 T 12-10-2018 IPR004195 Head decoration protein D M892_03325 c9a2f03990e12e9f5607e176281f44c8 113 ProDom PD020518 CAPSID HEAD PROPHAGE DECORATION SUBUNIT SMALL 3D-STRUCTURE MAJOR GIFSY-1 STRUCTURAL 29 109 6.0E-7 T 12-10-2018 IPR004195 Head decoration protein D M892_03325 c9a2f03990e12e9f5607e176281f44c8 113 Gene3D G3DSA:2.40.300.10 12 110 6.8E-27 T 12-10-2018 M892_03325 c9a2f03990e12e9f5607e176281f44c8 113 SUPERFAMILY SSF51274 17 112 1.31E-29 T 12-10-2018 IPR036630 Head decoration protein D superfamily M892_12830 400bb160bd3242d9a614ab8843c1a428 250 Pfam PF00849 RNA pseudouridylate synthase 23 174 4.5E-30 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 M892_12830 400bb160bd3242d9a614ab8843c1a428 250 Gene3D G3DSA:3.30.2350.10 4 222 1.6E-68 T 12-10-2018 M892_12830 400bb160bd3242d9a614ab8843c1a428 250 SUPERFAMILY SSF55120 7 221 7.04E-62 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 M892_12830 400bb160bd3242d9a614ab8843c1a428 250 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 60 74 - T 12-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 M892_18645 01515bebbf248e3e1ef27b52ab4f3be1 149 SMART SM00871 1 149 2.1E-15 T 12-10-2018 IPR010499 Bacterial transcription activator, effector binding M892_18645 01515bebbf248e3e1ef27b52ab4f3be1 149 Gene3D G3DSA:3.20.80.10 1 149 1.3E-43 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily M892_18645 01515bebbf248e3e1ef27b52ab4f3be1 149 Pfam PF14526 Integron-associated effector binding protein 3 148 3.4E-23 T 12-10-2018 IPR029441 Integron-associated effector binding protein M892_18645 01515bebbf248e3e1ef27b52ab4f3be1 149 SUPERFAMILY SSF55136 24 149 1.46E-12 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily M892_26360 8478f85003027c6edd6b5e5508ad2a9e 375 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 347 4.1E-118 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 M892_26360 8478f85003027c6edd6b5e5508ad2a9e 375 SUPERFAMILY SSF160544 244 351 1.57E-35 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal M892_26360 8478f85003027c6edd6b5e5508ad2a9e 375 Gene3D G3DSA:3.40.1690.10 217 358 8.9E-52 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal M892_26360 8478f85003027c6edd6b5e5508ad2a9e 375 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 3.1E-36 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 M892_26360 8478f85003027c6edd6b5e5508ad2a9e 375 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 3.1E-36 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 M892_26360 8478f85003027c6edd6b5e5508ad2a9e 375 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 3.1E-36 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 M892_26360 8478f85003027c6edd6b5e5508ad2a9e 375 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 3.1E-36 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 M892_26360 8478f85003027c6edd6b5e5508ad2a9e 375 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 3.1E-36 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 M892_26360 8478f85003027c6edd6b5e5508ad2a9e 375 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 7 352 4.8E-118 T 12-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 M892_27665 93122f151c0aa5cd4bc90f05d8ed96eb 135 Gene3D G3DSA:3.40.50.360 1 134 1.0E-40 T 12-10-2018 IPR029039 Flavoprotein-like superfamily M892_27665 93122f151c0aa5cd4bc90f05d8ed96eb 135 SUPERFAMILY SSF52218 2 132 6.22E-34 T 12-10-2018 IPR029039 Flavoprotein-like superfamily M892_27665 93122f151c0aa5cd4bc90f05d8ed96eb 135 Pfam PF03358 NADPH-dependent FMN reductase 3 78 1.0E-12 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 M892_17020 078bfc142b91bd34584b2f58b5cf29d6 760 Gene3D G3DSA:3.20.20.210 389 756 0.0 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 M892_17020 078bfc142b91bd34584b2f58b5cf29d6 760 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 431 753 3.0E-149 T 12-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 M892_17020 078bfc142b91bd34584b2f58b5cf29d6 760 SUPERFAMILY SSF51726 5 393 4.58E-109 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 M892_17020 078bfc142b91bd34584b2f58b5cf29d6 760 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 5 315 6.7E-119 T 12-10-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 M892_17020 078bfc142b91bd34584b2f58b5cf29d6 760 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 3 758 35.802 T 12-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 M892_17020 078bfc142b91bd34584b2f58b5cf29d6 760 SUPERFAMILY SSF51726 396 757 2.88E-114 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 M892_17020 078bfc142b91bd34584b2f58b5cf29d6 760 PIRSF PIRSF000382 2 760 0.0 T 12-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 M892_17020 078bfc142b91bd34584b2f58b5cf29d6 760 Gene3D G3DSA:3.20.20.210 7 524 0.0 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 M892_17020 078bfc142b91bd34584b2f58b5cf29d6 760 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 8 757 0.0 T 12-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 M892_14875 b19be13dcbf7215f0edd0ab2989e8a64 127 Pfam PF11944 Protein of unknown function (DUF3461) 1 126 9.3E-57 T 12-10-2018 IPR020911 Uncharacterised protein family UPF0325 M892_14875 b19be13dcbf7215f0edd0ab2989e8a64 127 Hamap MF_01519 UPF0325 protein YaeH [yaeH]. 1 127 31.471 T 12-10-2018 IPR020911 Uncharacterised protein family UPF0325 M892_14875 b19be13dcbf7215f0edd0ab2989e8a64 127 ProDom PD080106 UPF0325 YAEH STRUCTURAL ECA1027 VV11856 YPTB3007 PBPRA2971 VV2560 VF1965 VC2264 1 126 2.0E-65 T 12-10-2018 IPR020911 Uncharacterised protein family UPF0325 M892_05200 f08725ca5c7730e00774995e760a64d3 268 Pfam PF02698 DUF218 domain 80 242 1.3E-27 T 12-10-2018 IPR003848 Domain of unknown function DUF218 M892_12750 7602858ba5bbfddf121a298d171c7987 149 SUPERFAMILY SSF54523 2 121 1.02E-6 T 12-10-2018 M892_09005 f6b08cb87f6178ff34e1b5352ade29bb 419 Pfam PF02687 FtsX-like permease family 317 410 2.2E-11 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 M892_09005 f6b08cb87f6178ff34e1b5352ade29bb 419 Pfam PF12704 MacB-like periplasmic core domain 20 207 2.1E-10 T 12-10-2018 IPR025857 MacB-like periplasmic core domain M892_22210 e9c5a89e9d384e631ba9e9901c4e6289 544 SUPERFAMILY SSF52540 1 326 6.8E-18 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_22210 e9c5a89e9d384e631ba9e9901c4e6289 544 Gene3D G3DSA:3.40.50.300 1 343 7.5E-15 T 12-10-2018 M892_22210 e9c5a89e9d384e631ba9e9901c4e6289 544 Pfam PF11398 Protein of unknown function (DUF2813) 1 370 1.2E-143 T 12-10-2018 IPR022602 Protein of unknown function DUF2813 M892_22755 aa4daf0f9a85719359ef02c2cb65a862 189 Gene3D G3DSA:3.30.70.1070 89 180 3.8E-21 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 M892_22755 aa4daf0f9a85719359ef02c2cb65a862 189 SUPERFAMILY SSF110997 99 160 9.55E-7 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 M892_22755 aa4daf0f9a85719359ef02c2cb65a862 189 Pfam PF05036 Sporulation related domain 99 171 4.7E-12 T 12-10-2018 IPR007730 Sporulation-like domain GO:0042834 M892_15850 e04a3ecb7f1d3577219b3241317e33af 307 PRINTS PR01270 Histone deacetylase superfamily signature 155 170 8.9E-17 T 12-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 M892_15850 e04a3ecb7f1d3577219b3241317e33af 307 PRINTS PR01270 Histone deacetylase superfamily signature 229 239 8.9E-17 T 12-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 M892_15850 e04a3ecb7f1d3577219b3241317e33af 307 PRINTS PR01270 Histone deacetylase superfamily signature 121 144 8.9E-17 T 12-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 M892_15850 e04a3ecb7f1d3577219b3241317e33af 307 Pfam PF00850 Histone deacetylase domain 31 286 7.5E-52 T 12-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 M892_15850 e04a3ecb7f1d3577219b3241317e33af 307 SUPERFAMILY SSF52768 3 285 1.44E-81 T 12-10-2018 IPR023696 Ureohydrolase domain superfamily M892_15850 e04a3ecb7f1d3577219b3241317e33af 307 Gene3D G3DSA:3.40.800.20 2 302 2.2E-67 T 12-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 M892_21605 620a0446d98d24823781c3563cc46911 174 Pfam PF13007 Transposase C of IS166 homeodomain 50 120 3.1E-15 T 12-10-2018 IPR024463 Transposase TnpC, homeodomain M892_03285 1974a1c56e813e9c5535fa418da42685 337 Pfam PF04865 Baseplate J-like protein 124 294 2.9E-7 T 12-10-2018 IPR006949 Baseplate protein J-like M892_05435 83c607fc3fee64eac5609646eed55631 335 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 1 324 40.286 T 12-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 M892_05435 83c607fc3fee64eac5609646eed55631 335 SUPERFAMILY SSF52540 50 160 1.26E-11 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_05435 83c607fc3fee64eac5609646eed55631 335 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 18 323 4.5E-112 T 12-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 M892_05435 83c607fc3fee64eac5609646eed55631 335 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 23 325 3.8E-98 T 12-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 M892_11005 d8e5512ffc938270d3c5d7fce815a20f 101 Pfam PF12305 Protein of unknown function (DUF3630) 5 98 1.1E-38 T 12-10-2018 IPR022080 Protein of unknown function DUF3630 M892_08300 ffb286a7955e9e12a3937b537ae66496 206 Pfam PF03458 UPF0126 domain 95 165 4.1E-19 T 12-10-2018 IPR005115 Uncharacterised domain UPF0126 M892_08300 ffb286a7955e9e12a3937b537ae66496 206 Pfam PF03458 UPF0126 domain 8 81 2.7E-22 T 12-10-2018 IPR005115 Uncharacterised domain UPF0126 M892_04790 39bfe04917a3bcae869379b351c313a3 373 Pfam PF13808 DDE_Tnp_1-associated 8 94 8.0E-26 T 12-10-2018 IPR032806 H repeat-associated protein, N-terminal M892_04790 39bfe04917a3bcae869379b351c313a3 373 Pfam PF01609 Transposase DDE domain 103 335 1.7E-25 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_16335 baded701421e1bbdc2b2a2343a37aade 364 SUPERFAMILY SSF52540 93 324 2.98E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_16335 baded701421e1bbdc2b2a2343a37aade 364 Hamap MF_02040 Iron-sulfur cluster carrier protein. 95 344 36.125 T 12-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein M892_16335 baded701421e1bbdc2b2a2343a37aade 364 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 100 343 1.5E-98 T 12-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 M892_16335 baded701421e1bbdc2b2a2343a37aade 364 Gene3D G3DSA:3.40.50.300 85 342 2.5E-83 T 12-10-2018 M892_16335 baded701421e1bbdc2b2a2343a37aade 364 ProSitePatterns PS01215 Mrp family signature. 207 223 - T 12-10-2018 IPR000808 Mrp, conserved site GO:0005524 M892_09390 3c14ba9b7b47a8cc8dc9f85b95cc5e4c 452 Pfam PF13440 Polysaccharide biosynthesis protein 22 304 2.1E-40 T 12-10-2018 M892_15335 7982c5229886cf116a55850259161b32 295 Gene3D G3DSA:3.40.50.300 22 263 4.7E-59 T 12-10-2018 M892_15335 7982c5229886cf116a55850259161b32 295 SUPERFAMILY SSF52540 22 283 3.87E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_15335 7982c5229886cf116a55850259161b32 295 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 22 261 1.7E-22 T 12-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 M892_15335 7982c5229886cf116a55850259161b32 295 PIRSF PIRSF003092 6 287 3.9E-86 T 12-10-2018 IPR025501 ATP binding protein MinD M892_02255 3b8b6ea9a3ad9756816c961c3ee5173a 398 Gene3D G3DSA:3.90.550.10 38 276 8.8E-22 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M892_02255 3b8b6ea9a3ad9756816c961c3ee5173a 398 SUPERFAMILY SSF53448 57 324 2.06E-34 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M892_02255 3b8b6ea9a3ad9756816c961c3ee5173a 398 Pfam PF13641 Glycosyltransferase like family 2 60 280 1.1E-16 T 12-10-2018 M892_26710 e062cb8c143698af5e226cbbb69cdcab 119 Pfam PF11777 Protein of unknown function (DUF3316) 6 112 3.3E-13 T 12-10-2018 IPR016879 Uncharacterised conserved protein UCP028299 M892_26710 e062cb8c143698af5e226cbbb69cdcab 119 PIRSF PIRSF028299 1 118 2.4E-24 T 12-10-2018 IPR016879 Uncharacterised conserved protein UCP028299 M892_25605 42008e72b3343732721fa73fa9b1e290 317 SUPERFAMILY SSF55486 171 317 4.76E-15 T 12-10-2018 M892_02765 672fd94c662fa3c4fab3f9f603ba408b 327 Gene3D G3DSA:3.40.50.12250 44 304 1.7E-78 T 12-10-2018 M892_02765 672fd94c662fa3c4fab3f9f603ba408b 327 Pfam PF01497 Periplasmic binding protein 90 299 2.7E-30 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain M892_02765 672fd94c662fa3c4fab3f9f603ba408b 327 Gene3D G3DSA:3.40.50.12260 193 296 1.7E-78 T 12-10-2018 M892_02765 672fd94c662fa3c4fab3f9f603ba408b 327 SUPERFAMILY SSF53807 40 307 2.32E-61 T 12-10-2018 M892_05340 78ecf9cdf95a5d17e7c8464726a2a007 181 Gene3D G3DSA:1.20.1270.340 1 98 3.4E-16 T 12-10-2018 IPR038338 PriB/PriC superfamily M892_05340 78ecf9cdf95a5d17e7c8464726a2a007 181 Pfam PF07445 Primosomal replication protein priC 5 178 4.2E-49 T 12-10-2018 IPR010890 Primosomal replication PriB/PriC M892_11315 9d85b8e9873ed7303292e313f445a8db 136 Pfam PF03748 Flagellar basal body-associated protein FliL 34 136 2.2E-19 T 12-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 M892_24970 79e91805df513bd1a6ce9a2eecba0ca9 378 Pfam PF03773 Predicted permease 10 374 8.9E-62 T 12-10-2018 IPR005524 Predicted permease DUF318 M892_24970 79e91805df513bd1a6ce9a2eecba0ca9 378 SUPERFAMILY SSF103473 84 376 1.06E-7 T 12-10-2018 IPR036259 MFS transporter superfamily M892_02090 fbdc0d91ed46dbdd4c3ceee1b488337d 152 Pfam PF13673 Acetyltransferase (GNAT) domain 37 126 9.9E-11 T 12-10-2018 IPR000182 GNAT domain M892_02090 fbdc0d91ed46dbdd4c3ceee1b488337d 152 SUPERFAMILY SSF55729 10 124 4.46E-12 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_02090 fbdc0d91ed46dbdd4c3ceee1b488337d 152 Gene3D G3DSA:3.40.630.30 11 131 9.4E-15 T 12-10-2018 M892_24115 dae3f29bc3e6d2c00e6f68c346ea2e6f 292 SUPERFAMILY SSF103481 41 143 2.22E-11 T 12-10-2018 M892_24115 dae3f29bc3e6d2c00e6f68c346ea2e6f 292 Pfam PF00892 EamA-like transporter family 149 279 1.7E-15 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M892_24115 dae3f29bc3e6d2c00e6f68c346ea2e6f 292 Pfam PF00892 EamA-like transporter family 8 137 3.5E-13 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M892_24115 dae3f29bc3e6d2c00e6f68c346ea2e6f 292 SUPERFAMILY SSF103481 186 285 4.58E-14 T 12-10-2018 M892_12305 6ce09169e4cd3489b16b3d6c64b12207 238 Pfam PF13309 HTH domain 174 231 1.7E-18 T 12-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain M892_12305 6ce09169e4cd3489b16b3d6c64b12207 238 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 30 143 1.0E-61 T 12-10-2018 IPR013559 YheO-like M892_12305 6ce09169e4cd3489b16b3d6c64b12207 238 Pfam PF08348 YheO-like PAS domain 31 139 9.3E-36 T 12-10-2018 IPR013559 YheO-like M892_04600 3d7ff62a9e7edebe56054e5f53d486d9 967 SUPERFAMILY SSF56399 642 860 8.15E-19 T 12-10-2018 M892_04600 3d7ff62a9e7edebe56054e5f53d486d9 967 Gene3D G3DSA:3.90.176.10 714 859 1.8E-20 T 12-10-2018 M892_04600 3d7ff62a9e7edebe56054e5f53d486d9 967 Pfam PF03496 ADP-ribosyltransferase exoenzyme 782 852 2.5E-8 T 12-10-2018 IPR003540 ADP ribosyltransferase GO:0005576|GO:0009405 M892_13810 c25a268ca3d20b2e350f0c415a32b77c 562 SUPERFAMILY SSF52091 445 547 3.53E-11 T 12-10-2018 IPR036513 STAS domain superfamily M892_13810 c25a268ca3d20b2e350f0c415a32b77c 562 Pfam PF00916 Sulfate permease family 17 381 2.0E-85 T 12-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 M892_13810 c25a268ca3d20b2e350f0c415a32b77c 562 Gene3D G3DSA:3.30.750.24 434 556 3.2E-14 T 12-10-2018 IPR036513 STAS domain superfamily M892_13810 c25a268ca3d20b2e350f0c415a32b77c 562 Pfam PF01740 STAS domain 446 539 8.0E-12 T 12-10-2018 IPR002645 STAS domain M892_06985 261a12696c86cc6376cc0cadeb71ab2c 258 PIRSF PIRSF029037 1 258 3.6E-115 T 12-10-2018 IPR016908 Uncharacterised conserved protein UCP029037 M892_06985 261a12696c86cc6376cc0cadeb71ab2c 258 Pfam PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) 1 256 5.3E-114 T 12-10-2018 IPR016908 Uncharacterised conserved protein UCP029037 M892_15715 1fbcac46ff59d81cabd3a91e8cea2eb0 464 Gene3D G3DSA:3.90.1150.160 358 464 3.7E-32 T 12-10-2018 M892_15715 1fbcac46ff59d81cabd3a91e8cea2eb0 464 TIGRFAM TIGR01788 Glu-decarb-GAD: glutamate decarboxylase 17 444 1.9E-199 T 12-10-2018 IPR010107 Glutamate decarboxylase GO:0004351|GO:0006536|GO:0030170 KEGG: 00250+4.1.1.15|KEGG: 00410+4.1.1.15|KEGG: 00430+4.1.1.15|KEGG: 00650+4.1.1.15|MetaCyc: PWY-4321 M892_15715 1fbcac46ff59d81cabd3a91e8cea2eb0 464 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 39 368 1.7E-89 T 12-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 M892_15715 1fbcac46ff59d81cabd3a91e8cea2eb0 464 Gene3D G3DSA:3.40.640.10 66 357 2.1E-87 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M892_15715 1fbcac46ff59d81cabd3a91e8cea2eb0 464 SUPERFAMILY SSF53383 7 446 9.89E-142 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M892_03345 ad465f443fa90076e319e717b631f070 598 Pfam PF05876 Phage terminase large subunit (GpA) 2 560 1.7E-109 T 12-10-2018 IPR008866 Bacteriophage lambda, GpA M892_10680 4b29a08ac4f7636a63a7505f6d1118fb 312 Gene3D G3DSA:3.30.470.10 10 127 5.0E-106 T 12-10-2018 M892_10680 4b29a08ac4f7636a63a7505f6d1118fb 312 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 10 307 1.0E-141 T 12-10-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 M892_10680 4b29a08ac4f7636a63a7505f6d1118fb 312 SUPERFAMILY SSF56752 7 307 9.68E-103 T 12-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 M892_10680 4b29a08ac4f7636a63a7505f6d1118fb 312 Gene3D G3DSA:3.20.10.10 138 289 5.0E-106 T 12-10-2018 M892_10680 4b29a08ac4f7636a63a7505f6d1118fb 312 ProSitePatterns PS00770 Aminotransferases class-IV signature. 194 223 - T 12-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 M892_10680 4b29a08ac4f7636a63a7505f6d1118fb 312 Pfam PF01063 Amino-transferase class IV 36 268 2.2E-45 T 12-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 M892_15285 459a7b8892a68c601e9486e16c97174d 166 Pfam PF03748 Flagellar basal body-associated protein FliL 65 166 3.7E-19 T 12-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 M892_15565 3246f445b6fd22311c6e3a8043948c9a 197 Pfam PF05036 Sporulation related domain 121 189 7.1E-11 T 12-10-2018 IPR007730 Sporulation-like domain GO:0042834 M892_15565 3246f445b6fd22311c6e3a8043948c9a 197 SUPERFAMILY SSF110997 120 193 2.22E-14 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 M892_15565 3246f445b6fd22311c6e3a8043948c9a 197 Gene3D G3DSA:3.30.70.1070 114 191 5.7E-9 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 M892_18385 c63233f74e843428065a229e9ff2e8e7 266 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 255 2.8E-32 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M892_18385 c63233f74e843428065a229e9ff2e8e7 266 Gene3D G3DSA:1.10.3720.10 63 260 9.1E-27 T 12-10-2018 IPR035906 MetI-like superfamily M892_18385 c63233f74e843428065a229e9ff2e8e7 266 SUPERFAMILY SSF161098 68 253 5.49E-33 T 12-10-2018 IPR035906 MetI-like superfamily M892_00350 cd956736de43d44254a9bc2a75ac07db 548 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 64 442 2.7E-55 T 12-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 M892_00350 cd956736de43d44254a9bc2a75ac07db 548 SUPERFAMILY SSF53383 27 528 3.85E-115 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M892_00350 cd956736de43d44254a9bc2a75ac07db 548 TIGRFAM TIGR03799 NOD_PanD_pyr: putative pyridoxal-dependent aspartate 1-decarboxylase 6 527 1.1E-298 T 12-10-2018 IPR022517 Aspartate 1-decarboxylase, pyridoxal-dependent KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 M892_00350 cd956736de43d44254a9bc2a75ac07db 548 Gene3D G3DSA:3.90.1150.170 49 524 9.7E-115 T 12-10-2018 M892_00350 cd956736de43d44254a9bc2a75ac07db 548 Gene3D G3DSA:3.40.640.10 122 387 9.7E-115 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M892_06415 f68074496ede09db24c6aa03a2642046 69 ProDom PD057827 ZN-RIBBON HI1126 PM0127 TRANSMEMBRANE ORF196EGC129 MEMBRANE SO2423 GLL0157 1 56 2.0E-4 T 12-10-2018 M892_01590 79a397b57d6eaa8d214fc5c36ed358cd 390 SUPERFAMILY SSF161098 183 371 1.16E-23 T 12-10-2018 IPR035906 MetI-like superfamily M892_01590 79a397b57d6eaa8d214fc5c36ed358cd 390 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 217 385 2.1E-12 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M892_01590 79a397b57d6eaa8d214fc5c36ed358cd 390 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 81 144 4.8E-17 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 M892_01590 79a397b57d6eaa8d214fc5c36ed358cd 390 Gene3D G3DSA:1.10.3720.10 68 176 2.0E-15 T 12-10-2018 IPR035906 MetI-like superfamily M892_01590 79a397b57d6eaa8d214fc5c36ed358cd 390 Gene3D G3DSA:1.10.3720.10 179 386 4.6E-32 T 12-10-2018 IPR035906 MetI-like superfamily M892_01590 79a397b57d6eaa8d214fc5c36ed358cd 390 SUPERFAMILY SSF161098 80 149 8.11E-12 T 12-10-2018 IPR035906 MetI-like superfamily M892_11975 0467880a7de05db9b8f1e160a16a7346 318 SUPERFAMILY SSF64182 5 317 1.7E-44 T 12-10-2018 IPR038763 DHH phosphoesterase superfamily M892_03785 5348f6805ced1c894b48735e462f6d2f 186 SUPERFAMILY SSF53850 78 184 1.07E-6 T 12-10-2018 M892_20310 fbe7e3d230042853f1d89a6f009f51d7 132 Pfam PF00293 NUDIX domain 2 108 1.6E-15 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 M892_20310 fbe7e3d230042853f1d89a6f009f51d7 132 Gene3D G3DSA:3.90.79.10 2 127 2.7E-23 T 12-10-2018 M892_20310 fbe7e3d230042853f1d89a6f009f51d7 132 SUPERFAMILY SSF55811 5 114 3.93E-23 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 M892_20310 fbe7e3d230042853f1d89a6f009f51d7 132 PRINTS PR00502 NUDIX hydrolase family signature 25 39 2.5E-5 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 M892_20310 fbe7e3d230042853f1d89a6f009f51d7 132 PRINTS PR00502 NUDIX hydrolase family signature 39 54 2.5E-5 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 M892_18335 4e58958e0263c2b08fe21395fbfa5028 154 SUPERFAMILY SSF55729 1 153 4.99E-34 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_18335 4e58958e0263c2b08fe21395fbfa5028 154 Gene3D G3DSA:3.40.630.30 3 153 2.9E-37 T 12-10-2018 M892_18335 4e58958e0263c2b08fe21395fbfa5028 154 Pfam PF00583 Acetyltransferase (GNAT) family 26 143 9.9E-19 T 12-10-2018 IPR000182 GNAT domain M892_25890 87072dcddf34efa945e2213b3fd23270 117 Pfam PF05717 IS66 Orf2 like protein 9 103 1.9E-32 T 12-10-2018 IPR008878 Transposase IS66, Orf2 M892_22590 87072dcddf34efa945e2213b3fd23270 117 Pfam PF05717 IS66 Orf2 like protein 9 103 1.9E-32 T 12-10-2018 IPR008878 Transposase IS66, Orf2 M892_06070 63b816f9c3c63b037e4850efa86fd0f6 240 Gene3D G3DSA:1.10.530.10 79 193 1.6E-8 T 12-10-2018 M892_06070 63b816f9c3c63b037e4850efa86fd0f6 240 Pfam PF01464 Transglycosylase SLT domain 93 146 3.9E-5 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 M892_06070 63b816f9c3c63b037e4850efa86fd0f6 240 SUPERFAMILY SSF53955 75 187 1.13E-11 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily M892_21285 9751c9fc6a73ee2dcb4db99162cfa6f6 226 SUPERFAMILY SSF51206 21 148 3.8E-20 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like M892_21285 9751c9fc6a73ee2dcb4db99162cfa6f6 226 Gene3D G3DSA:2.60.120.10 12 144 5.6E-15 T 12-10-2018 IPR014710 RmlC-like jelly roll fold M892_21285 9751c9fc6a73ee2dcb4db99162cfa6f6 226 Pfam PF00027 Cyclic nucleotide-binding domain 34 113 6.3E-11 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain M892_05045 d8974d1366e70e2559fa09dd38f13f56 189 Pfam PF06693 Protein of unknown function (DUF1190) 41 184 1.5E-28 T 12-10-2018 IPR009576 Biofilm formation YgiB M892_05115 c13b21778f50dfe6d0cde0eba429641d 528 PIRSF PIRSF006446 338 526 1.5E-31 T 12-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 M892_05115 c13b21778f50dfe6d0cde0eba429641d 528 PIRSF PIRSF006446 1 332 3.5E-116 T 12-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 M892_05115 c13b21778f50dfe6d0cde0eba429641d 528 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 501 5.4E-177 T 12-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 M892_08445 159669f91ad3b1d987d2c8699c95d811 219 SMART SM00749 48 111 27.0 T 12-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria M892_08445 159669f91ad3b1d987d2c8699c95d811 219 SMART SM00749 125 188 8.4E-5 T 12-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria M892_08445 159669f91ad3b1d987d2c8699c95d811 219 Pfam PF04972 BON domain 120 185 1.8E-16 T 12-10-2018 IPR007055 BON domain M892_08445 159669f91ad3b1d987d2c8699c95d811 219 Pfam PF04972 BON domain 44 110 1.3E-12 T 12-10-2018 IPR007055 BON domain M892_23525 46e97c4055c41a09ac10fe1be26bf962 226 Pfam PF01863 Protein of unknown function DUF45 16 220 3.8E-59 T 12-10-2018 IPR002725 Protein of unknown function DUF45 M892_23525 46e97c4055c41a09ac10fe1be26bf962 226 Gene3D G3DSA:3.30.2010.10 129 219 4.3E-17 T 12-10-2018 M892_01460 8ee454f8f432cba7f99c64a70a5ee59d 112 SMART SM00495 42 87 2.5E-9 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 M892_01460 8ee454f8f432cba7f99c64a70a5ee59d 112 SUPERFAMILY SSF51055 30 87 6.08E-14 T 12-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 M892_01460 8ee454f8f432cba7f99c64a70a5ee59d 112 Gene3D G3DSA:2.10.10.20 41 85 5.8E-17 T 12-10-2018 M892_24920 f8fd542feac9ab45a59c9316ff877c12 143 PIRSF PIRSF028777 1 138 1.4E-51 T 12-10-2018 IPR031308 Uncharacterised conserved protein UCP028777 M892_24920 f8fd542feac9ab45a59c9316ff877c12 143 Pfam PF03733 Inner membrane component domain 4 54 3.5E-14 T 12-10-2018 IPR005185 Inner membrane component domain M892_24920 f8fd542feac9ab45a59c9316ff877c12 143 Pfam PF03733 Inner membrane component domain 76 126 1.6E-18 T 12-10-2018 IPR005185 Inner membrane component domain M892_21180 6a46db0ade2ef9591cb356421368b3be 336 Pfam PF10974 Protein of unknown function (DUF2804) 17 335 2.8E-86 T 12-10-2018 IPR021243 Protein of unknown function DUF2804 M892_05100 8e781074fd2ed2284c26effac5eb3dfc 100 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 20 97 5.4E-29 T 12-10-2018 IPR011846 Cyd operon protein YbgE M892_05100 8e781074fd2ed2284c26effac5eb3dfc 100 TIGRFAM TIGR02112 cyd_oper_ybgE: cyd operon protein YbgE 8 100 1.8E-39 T 12-10-2018 IPR011846 Cyd operon protein YbgE M892_08160 d99d3324e7b0637bbed65ccee8bfbbd6 289 Pfam PF03883 Peroxide stress protein YaaA 32 274 2.1E-93 T 12-10-2018 IPR005583 Peroxide stress protein YaaA M892_08160 d99d3324e7b0637bbed65ccee8bfbbd6 289 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 32 286 38.711 T 12-10-2018 IPR005583 Peroxide stress protein YaaA M892_13190 c386a1c2d0140cd9deea3356c7f641eb 184 Pfam PF01609 Transposase DDE domain 21 92 3.1E-7 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_13190 c386a1c2d0140cd9deea3356c7f641eb 184 SUPERFAMILY SSF53098 11 172 1.29E-30 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_25940 8f3de67a4c354f11931789827be1b3a0 338 Pfam PF01548 Transposase 7 147 6.6E-19 T 12-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 M892_25940 8f3de67a4c354f11931789827be1b3a0 338 Pfam PF02371 Transposase IS116/IS110/IS902 family 213 290 1.8E-16 T 12-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 M892_16850 8f3de67a4c354f11931789827be1b3a0 338 Pfam PF01548 Transposase 7 147 6.6E-19 T 12-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 M892_16850 8f3de67a4c354f11931789827be1b3a0 338 Pfam PF02371 Transposase IS116/IS110/IS902 family 213 290 1.8E-16 T 12-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 M892_26315 93dab86754960c787e18ff84a5f4fa62 583 Gene3D G3DSA:3.30.300.30 141 243 1.9E-12 T 12-10-2018 M892_26315 93dab86754960c787e18ff84a5f4fa62 583 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 33 572 5.0E-70 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 M892_26315 93dab86754960c787e18ff84a5f4fa62 583 Pfam PF01514 Secretory protein of YscJ/FliF family 52 243 5.3E-64 T 12-10-2018 IPR006182 Secretory protein YscJ/FliF M892_26315 93dab86754960c787e18ff84a5f4fa62 583 PRINTS PR01009 Flagellar M-ring protein signature 143 161 9.8E-26 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 M892_26315 93dab86754960c787e18ff84a5f4fa62 583 PRINTS PR01009 Flagellar M-ring protein signature 175 189 9.8E-26 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 M892_26315 93dab86754960c787e18ff84a5f4fa62 583 PRINTS PR01009 Flagellar M-ring protein signature 219 237 9.8E-26 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 M892_26315 93dab86754960c787e18ff84a5f4fa62 583 PRINTS PR01009 Flagellar M-ring protein signature 361 385 9.8E-26 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 M892_26315 93dab86754960c787e18ff84a5f4fa62 583 PRINTS PR01009 Flagellar M-ring protein signature 290 308 9.8E-26 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 M892_26315 93dab86754960c787e18ff84a5f4fa62 583 Pfam PF08345 Flagellar M-ring protein C-terminal 277 431 4.2E-37 T 12-10-2018 IPR013556 Flagellar M-ring C-terminal M892_26315 93dab86754960c787e18ff84a5f4fa62 583 PIRSF PIRSF004862 24 574 5.2E-126 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 M892_14790 b96cfa2b3c21933893a3783c7a8e4902 443 SUPERFAMILY SSF53098 103 412 6.22E-19 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_14790 b96cfa2b3c21933893a3783c7a8e4902 443 Pfam PF13006 Insertion element 4 transposase N-terminal 16 108 1.1E-24 T 12-10-2018 IPR024473 Transposase, IS4, N-terminal M892_14790 b96cfa2b3c21933893a3783c7a8e4902 443 Pfam PF01609 Transposase DDE domain 126 357 1.2E-22 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_13185 962f286713427003f3fd1f36ef2074cd 306 Gene3D G3DSA:3.40.710.10 1 306 1.3E-108 T 12-10-2018 M892_13185 962f286713427003f3fd1f36ef2074cd 306 Pfam PF04960 Glutaminase 22 306 9.3E-112 T 12-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 M892_13185 962f286713427003f3fd1f36ef2074cd 306 TIGRFAM TIGR03814 Gln_ase: glutaminase A 8 306 7.9E-130 T 12-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 M892_13185 962f286713427003f3fd1f36ef2074cd 306 SUPERFAMILY SSF56601 4 306 9.48E-113 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like M892_13185 962f286713427003f3fd1f36ef2074cd 306 Hamap MF_00313 Glutaminase [glsA]. 4 306 46.968 T 12-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 M892_06410 23eae30cde5985bd9c54151ed0e206bb 181 SUPERFAMILY SSF56300 2 164 8.81E-37 T 12-10-2018 M892_06410 23eae30cde5985bd9c54151ed0e206bb 181 Gene3D G3DSA:3.60.21.10 1 181 8.9E-60 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like M892_06410 23eae30cde5985bd9c54151ed0e206bb 181 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 2 162 2.3E-22 T 12-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 M892_06410 23eae30cde5985bd9c54151ed0e206bb 181 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 2 168 7.7E-28 T 12-10-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 M892_13365 4f629a446fd98167961e2d29daab111a 68 Gene3D G3DSA:3.30.1910.10 1 63 1.7E-29 T 12-10-2018 M892_13365 4f629a446fd98167961e2d29daab111a 68 Pfam PF06526 Protein of unknown function (DUF1107) 1 63 6.4E-29 T 12-10-2018 IPR009491 Protein of unknown function DUF1107 M892_13365 4f629a446fd98167961e2d29daab111a 68 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 63 1.0E-28 T 12-10-2018 IPR009491 Protein of unknown function DUF1107 M892_08460 e13e18e269ae8a197d5e78d54c73a4c7 245 SUPERFAMILY SSF46626 16 208 2.54E-48 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M892_08460 e13e18e269ae8a197d5e78d54c73a4c7 245 Gene3D G3DSA:1.10.760.10 26 210 2.5E-15 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M892_08460 e13e18e269ae8a197d5e78d54c73a4c7 245 Pfam PF02167 Cytochrome C1 family 34 244 5.8E-14 T 12-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 M892_24140 767c572d0ba697a8a12f2a212c95a7bc 226 Gene3D G3DSA:3.10.129.10 76 225 7.4E-35 T 12-10-2018 M892_24140 767c572d0ba697a8a12f2a212c95a7bc 226 SUPERFAMILY SSF54637 77 221 1.49E-30 T 12-10-2018 IPR029069 HotDog domain superfamily M892_24140 767c572d0ba697a8a12f2a212c95a7bc 226 Pfam PF01575 MaoC like domain 85 201 1.5E-21 T 12-10-2018 IPR002539 MaoC-like dehydratase domain M892_01780 592771039df8a8029eaee6b13e8ad8a3 61 Pfam PF11455 Protein of unknown function (DUF3018) 3 39 9.7E-6 T 12-10-2018 IPR021558 Protein of unknown function DUF3018 M892_00590 7414595707d2278b7aca6bcca193de0c 312 SUPERFAMILY SSF53098 1 312 1.06E-40 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_00590 7414595707d2278b7aca6bcca193de0c 312 Pfam PF01609 Transposase DDE domain 92 307 2.5E-14 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_05335 bdb86113c30f28de9187d88f7082d811 261 Pfam PF01925 Sulfite exporter TauE/SafE 12 251 5.5E-46 T 12-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 M892_20360 884d1482ced323550a366d62b6be4deb 308 Gene3D G3DSA:3.60.10.10 87 306 6.1E-19 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily M892_20360 884d1482ced323550a366d62b6be4deb 308 SUPERFAMILY SSF56219 86 303 6.02E-23 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily M892_20360 884d1482ced323550a366d62b6be4deb 308 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 92 278 9.5E-6 T 12-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase M892_28310 34e9b0f9ca6f5bdd5cc1bfce46580423 117 Pfam PF05713 Bacterial mobilisation protein (MobC) 70 92 2.9E-5 T 12-10-2018 IPR008687 Bacterial mobilisation M892_22425 9eae694a39852829e437ac3b273d7e80 332 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 10 317 4.2E-98 T 12-10-2018 IPR010732 Type VI secretion, TssG-like M892_22425 9eae694a39852829e437ac3b273d7e80 332 Pfam PF06996 Type VI secretion, TssG 10 317 1.0E-86 T 12-10-2018 IPR010732 Type VI secretion, TssG-like M892_07060 f4500f2df70111cba066f7a252b6634b 314 Gene3D G3DSA:3.30.1330.60 153 301 1.7E-53 T 12-10-2018 IPR036737 OmpA-like domain superfamily M892_07060 f4500f2df70111cba066f7a252b6634b 314 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 12 57 2.3E-17 T 12-10-2018 IPR025713 Motility protein B, N-terminal domain M892_07060 f4500f2df70111cba066f7a252b6634b 314 SUPERFAMILY SSF103088 182 299 3.4E-30 T 12-10-2018 IPR036737 OmpA-like domain superfamily M892_07060 f4500f2df70111cba066f7a252b6634b 314 Pfam PF00691 OmpA family 195 293 1.4E-17 T 12-10-2018 IPR006665 OmpA-like domain M892_27100 c1c25c0acfd04fae5c4d65b3b532cae9 142 Gene3D G3DSA:1.20.120.1490 36 141 1.6E-15 T 12-10-2018 M892_27100 c1c25c0acfd04fae5c4d65b3b532cae9 142 Pfam PF07813 LTXXQ motif family protein 37 126 1.2E-9 T 12-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 M892_17900 a120a2399f70cc9173a5559f55105a07 167 Pfam PF11012 Protein of unknown function (DUF2850) 59 138 1.8E-29 T 12-10-2018 IPR021271 Protein of unknown function DUF2850 M892_07100 dbc986f5d8ed8f1ce7f85f0b82388405 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 150 2.4E-55 T 12-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 M892_07100 dbc986f5d8ed8f1ce7f85f0b82388405 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 151 9.7E-58 T 12-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 M892_07100 dbc986f5d8ed8f1ce7f85f0b82388405 156 SUPERFAMILY SSF52121 4 154 4.58E-61 T 12-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 M892_07100 dbc986f5d8ed8f1ce7f85f0b82388405 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 154 31.315 T 12-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 M892_07100 dbc986f5d8ed8f1ce7f85f0b82388405 156 Gene3D G3DSA:3.40.50.960 1 156 1.9E-64 T 12-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 M892_25395 ccf53ff82747addde46cd78c27482932 385 SUPERFAMILY SSF53098 8 372 2.43E-54 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_25395 ccf53ff82747addde46cd78c27482932 385 Pfam PF01609 Transposase DDE domain 132 293 4.8E-15 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_02350 8635d919388f6aa0988d728bb36d66f0 139 Gene3D G3DSA:2.60.120.10 30 136 4.5E-18 T 12-10-2018 IPR014710 RmlC-like jelly roll fold M892_02350 8635d919388f6aa0988d728bb36d66f0 139 Pfam PF07883 Cupin domain 61 128 2.1E-14 T 12-10-2018 IPR013096 Cupin 2, conserved barrel M892_02350 8635d919388f6aa0988d728bb36d66f0 139 SUPERFAMILY SSF51182 37 130 1.87E-20 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily M892_02560 74418ccb2024979d795f537652ebc774 385 Pfam PF01609 Transposase DDE domain 130 293 1.6E-15 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_02560 74418ccb2024979d795f537652ebc774 385 SUPERFAMILY SSF53098 8 372 2.2E-54 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_00215 a41de5d51c60174bfe9d8cd9e91217ce 248 Pfam PF00535 Glycosyl transferase family 2 9 117 6.0E-25 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 M892_00215 a41de5d51c60174bfe9d8cd9e91217ce 248 SUPERFAMILY SSF53448 5 228 6.05E-44 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M892_00215 a41de5d51c60174bfe9d8cd9e91217ce 248 Gene3D G3DSA:3.90.550.10 1 208 4.0E-40 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M892_02520 084dc6ec885e0d1b247bd22d03471402 236 SUPERFAMILY SSF48576 4 191 1.23E-42 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily M892_02520 084dc6ec885e0d1b247bd22d03471402 236 Gene3D G3DSA:1.10.600.10 1 225 6.8E-47 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily M892_02520 084dc6ec885e0d1b247bd22d03471402 236 Pfam PF00348 Polyprenyl synthetase 10 168 1.3E-36 T 12-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 M892_02520 084dc6ec885e0d1b247bd22d03471402 236 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 27 41 - T 12-10-2018 IPR033749 Polyprenyl synthetase, conserved site M892_24120 d7ffdd678c0ee1f2e9ea45a7aa6d66bc 129 Gene3D G3DSA:1.10.760.10 36 118 6.9E-22 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M892_24120 d7ffdd678c0ee1f2e9ea45a7aa6d66bc 129 SUPERFAMILY SSF46626 16 118 4.3E-20 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M892_24120 d7ffdd678c0ee1f2e9ea45a7aa6d66bc 129 Pfam PF00034 Cytochrome c 46 116 3.1E-7 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_26420 e18d551d4e8eecf8cf902d7d42d002b5 285 Pfam PF01618 MotA/TolQ/ExbB proton channel family 134 238 8.4E-9 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel M892_26420 e18d551d4e8eecf8cf902d7d42d002b5 285 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 12-10-2018 IPR000540 Flagellar motor protein MotA, conserved site M892_26420 e18d551d4e8eecf8cf902d7d42d002b5 285 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 1 281 1.3E-115 T 12-10-2018 IPR022522 Flagellar motor stator, MotA M892_07900 c9da01072a64065f47d97bcd7b7e155b 108 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 98 7.7E-31 T 12-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 M892_07900 c9da01072a64065f47d97bcd7b7e155b 108 SUPERFAMILY SSF69754 1 102 2.35E-29 T 12-10-2018 IPR036567 Ribosome hibernation promotion factor-like M892_07900 c9da01072a64065f47d97bcd7b7e155b 108 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 92 7.3E-23 T 12-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 M892_07900 c9da01072a64065f47d97bcd7b7e155b 108 Gene3D G3DSA:3.30.160.100 1 105 2.9E-33 T 12-10-2018 IPR036567 Ribosome hibernation promotion factor-like M892_07185 9ae2a662d56136010f8947cdfb75bdd8 249 Pfam PF01609 Transposase DDE domain 85 243 2.2E-16 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_07185 9ae2a662d56136010f8947cdfb75bdd8 249 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 2 73 1.5E-25 T 12-10-2018 IPR025161 Putative transposase IS4/IS5 family M892_20740 e523f5480f9706ea1363fd9536a07f34 339 Pfam PF02628 Cytochrome oxidase assembly protein 9 315 7.5E-82 T 12-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 M892_19440 a4522b771eccb1fd96157101baee505d 103 SUPERFAMILY SSF54593 5 102 1.27E-15 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M892_19440 a4522b771eccb1fd96157101baee505d 103 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 20 101 9.9E-6 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain M892_19440 a4522b771eccb1fd96157101baee505d 103 Gene3D G3DSA:3.10.180.10 1 103 7.9E-23 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M892_16885 dd88a8e38986c8c2bc66cd22d04717c1 324 PIRSF PIRSF034367 1 324 1.2E-199 T 12-10-2018 IPR015004 Protein of unknown function DUF1852 M892_16885 dd88a8e38986c8c2bc66cd22d04717c1 324 Pfam PF08908 Domain of unknown function (DUF1852) 1 321 2.2E-186 T 12-10-2018 IPR015004 Protein of unknown function DUF1852 M892_25095 f182b858412468e6b2a17852c9039b5e 137 Pfam PF02472 Biopolymer transport protein ExbD/TolR 13 134 1.4E-21 T 12-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 M892_20715 9942a79e0120d614bbdda785d2271cdb 196 Gene3D G3DSA:2.60.370.10 54 189 1.5E-43 T 12-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_20715 9942a79e0120d614bbdda785d2271cdb 196 SUPERFAMILY SSF110111 54 175 1.29E-46 T 12-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_20715 9942a79e0120d614bbdda785d2271cdb 196 PIRSF PIRSF005413 1 192 1.7E-67 T 12-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_20715 9942a79e0120d614bbdda785d2271cdb 196 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 28 172 3.7E-49 T 12-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_19220 5db0da2fc04736ae090e1de0059ef677 228 Gene3D G3DSA:1.10.287.70 123 227 3.7E-21 T 12-10-2018 M892_19220 5db0da2fc04736ae090e1de0059ef677 228 Pfam PF07885 Ion channel 134 217 9.9E-18 T 12-10-2018 IPR013099 Potassium channel domain M892_19220 5db0da2fc04736ae090e1de0059ef677 228 SUPERFAMILY SSF81324 125 220 8.37E-19 T 12-10-2018 M892_19220 5db0da2fc04736ae090e1de0059ef677 228 PRINTS PR00169 Potassium channel signature 193 219 7.5E-6 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 M892_19220 5db0da2fc04736ae090e1de0059ef677 228 PRINTS PR00169 Potassium channel signature 126 149 7.5E-6 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 M892_19220 5db0da2fc04736ae090e1de0059ef677 228 PRINTS PR00169 Potassium channel signature 164 186 7.5E-6 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 M892_10055 7dde517ba57d89c66243c5fb3d72e502 264 SUPERFAMILY SSF56349 152 256 2.33E-8 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 M892_10055 7dde517ba57d89c66243c5fb3d72e502 264 Gene3D G3DSA:1.10.443.10 132 259 3.9E-7 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 M892_16095 a9780a340e331bb0d0f80ec1f6ed2d78 80 Pfam PF05717 IS66 Orf2 like protein 3 66 5.0E-22 T 12-10-2018 IPR008878 Transposase IS66, Orf2 M892_22880 a9780a340e331bb0d0f80ec1f6ed2d78 80 Pfam PF05717 IS66 Orf2 like protein 3 66 5.0E-22 T 12-10-2018 IPR008878 Transposase IS66, Orf2 M892_06850 3df5ebd79a4afcef56b01065ac7ce125 156 Pfam PF07295 Zinc-ribbon containing domain 14 152 3.9E-46 T 12-10-2018 IPR009912 Zinc-ribbon containing domain M892_08280 2b1ebfebf0ca679120c6c99df6af84ab 142 Pfam PF07386 Protein of unknown function (DUF1499) 30 133 6.0E-24 T 12-10-2018 IPR010865 Protein of unknown function DUF1499 M892_08280 2b1ebfebf0ca679120c6c99df6af84ab 142 PIRSF PIRSF026426 1 142 8.8E-48 T 12-10-2018 IPR010865 Protein of unknown function DUF1499 M892_03420 7533ac5fbf33e6b5a53f0e82ee7d6328 103 SUPERFAMILY SSF52980 4 93 1.93E-6 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 M892_03420 7533ac5fbf33e6b5a53f0e82ee7d6328 103 Gene3D G3DSA:3.40.960.10 1 103 1.3E-12 T 12-10-2018 M892_26625 fa5ca55789b6cb91092406b76142c954 145 Gene3D G3DSA:1.20.58.300 6 135 4.9E-21 T 12-10-2018 M892_26625 fa5ca55789b6cb91092406b76142c954 145 SUPERFAMILY SSF140566 8 136 5.89E-28 T 12-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 M892_26625 fa5ca55789b6cb91092406b76142c954 145 Pfam PF05130 FlgN protein 8 134 2.2E-15 T 12-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 M892_23620 9904fc1394d5d10eb94464449f0aa7ef 191 SUPERFAMILY SSF48498 81 189 9.64E-13 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily M892_23620 9904fc1394d5d10eb94464449f0aa7ef 191 Gene3D G3DSA:1.10.357.10 72 189 1.8E-13 T 12-10-2018 M892_23620 9904fc1394d5d10eb94464449f0aa7ef 191 Gene3D G3DSA:1.10.10.60 1 66 5.1E-21 T 12-10-2018 M892_23620 9904fc1394d5d10eb94464449f0aa7ef 191 SUPERFAMILY SSF46689 2 65 2.77E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_23620 9904fc1394d5d10eb94464449f0aa7ef 191 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 56 9.5E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M892_04525 24aa0f5cef8d428ee267d5624330efca 431 TIGRFAM TIGR02514 type_III_yscP: type III secretion system needle length determinant 298 430 9.0E-49 T 12-10-2018 IPR013354 Type III secretion system needle length determinant, C-terminal domain GO:0009405 M892_22060 e5594759014ce8976f96565948a2e9a5 265 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 79 258 2.0E-19 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M892_22060 e5594759014ce8976f96565948a2e9a5 265 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 59 153 2.8E-26 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 M892_22060 e5594759014ce8976f96565948a2e9a5 265 Gene3D G3DSA:1.10.3720.10 48 260 2.9E-52 T 12-10-2018 IPR035906 MetI-like superfamily M892_22060 e5594759014ce8976f96565948a2e9a5 265 SUPERFAMILY SSF161098 59 245 3.14E-44 T 12-10-2018 IPR035906 MetI-like superfamily M892_00615 53a0a6a4f90d5bd2078948305474e76f 76 Pfam PF09016 Pas factor saposin fold 1 76 2.1E-41 T 12-10-2018 IPR015106 Pas factor saposin domain M892_00615 53a0a6a4f90d5bd2078948305474e76f 76 Gene3D G3DSA:1.20.1280.100 1 73 5.5E-41 T 12-10-2018 M892_19325 1cd35d63cb67728092276effc8271ed6 557 Pfam PF16130 Domain of unknown function (DUF4842) 325 544 2.6E-51 T 12-10-2018 IPR032295 Domain of unknown function DUF4842 M892_19325 1cd35d63cb67728092276effc8271ed6 557 Pfam PF13448 Domain of unknown function (DUF4114) 161 247 1.5E-21 T 12-10-2018 IPR025193 Domain of unknown function DUF4114 M892_19325 1cd35d63cb67728092276effc8271ed6 557 TIGRFAM TIGR04456 LruC_dom: LruC domain 290 545 6.8E-80 T 12-10-2018 IPR031025 LruC domain M892_00495 e0918f62c50edc817a3307a6e19f952b 90 Pfam PF02371 Transposase IS116/IS110/IS902 family 1 43 2.7E-7 T 12-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 M892_10955 8f6598f4a5667efa5885c8772988a841 252 Pfam PF09836 Putative DNA-binding domain 6 94 5.4E-23 T 12-10-2018 IPR018640 Putative DNA-binding domain, bacteria M892_18520 4635daf179077ee00a101e4fc60ec070 313 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 32 300 9.3E-32 T 12-10-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system M892_00970 87706ca778ff9902e1edd4ba1fa62028 164 Pfam PF13006 Insertion element 4 transposase N-terminal 16 108 1.4E-25 T 12-10-2018 IPR024473 Transposase, IS4, N-terminal M892_21185 d4eda04311d2de82eccfa6c965c28094 271 Pfam PF04116 Fatty acid hydroxylase superfamily 92 226 2.1E-30 T 12-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 M892_09510 f5f69fcb7845b8eefef9338abc1f0c7a 396 Pfam PF02719 Polysaccharide biosynthesis protein 36 334 1.7E-44 T 12-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain M892_09510 f5f69fcb7845b8eefef9338abc1f0c7a 396 Gene3D G3DSA:3.90.25.40 201 311 5.1E-158 T 12-10-2018 M892_09510 f5f69fcb7845b8eefef9338abc1f0c7a 396 SUPERFAMILY SSF51735 35 307 1.98E-27 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_09510 f5f69fcb7845b8eefef9338abc1f0c7a 396 Gene3D G3DSA:3.40.50.720 9 370 5.1E-158 T 12-10-2018 M892_01705 bdb52d5c356ecc1237895a0f512ac5a0 83 SUPERFAMILY SSF52833 4 76 4.93E-13 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M892_01705 bdb52d5c356ecc1237895a0f512ac5a0 83 Pfam PF05768 Glutaredoxin-like domain (DUF836) 5 74 4.1E-18 T 12-10-2018 IPR008554 Glutaredoxin-like M892_01705 bdb52d5c356ecc1237895a0f512ac5a0 83 Gene3D G3DSA:3.40.30.10 4 83 7.1E-20 T 12-10-2018 M892_05230 a0152bcdf67188e4249770d7dec45e29 229 Pfam PF09335 SNARE associated Golgi protein 65 181 3.4E-23 T 12-10-2018 IPR032816 SNARE associated Golgi protein M892_25675 1d53557f6ce37cb0be1070e6bc4b7a78 385 Pfam PF01609 Transposase DDE domain 130 293 1.3E-15 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_25675 1d53557f6ce37cb0be1070e6bc4b7a78 385 SUPERFAMILY SSF53098 8 372 1.74E-54 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_03230 08a68b328faf971cbd05a5590dad5166 73 Pfam PF05489 Phage Tail Protein X 10 60 6.6E-8 T 12-10-2018 IPR008861 Phage Tail Protein X-like M892_03230 08a68b328faf971cbd05a5590dad5166 73 Gene3D G3DSA:3.10.350.10 5 73 2.4E-13 T 12-10-2018 IPR036779 LysM domain superfamily M892_12715 170d3a88452f9c1b051b233aba8625bd 281 Pfam PF13401 AAA domain 42 168 6.5E-24 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_12715 170d3a88452f9c1b051b233aba8625bd 281 Gene3D G3DSA:3.40.50.300 28 183 4.7E-14 T 12-10-2018 M892_12715 170d3a88452f9c1b051b233aba8625bd 281 SUPERFAMILY SSF52540 5 260 3.02E-26 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_17740 a0da1f0033e6e90605a49bcaa54201e7 476 TIGRFAM TIGR00775 NhaD: Na+/H+ antiporter, NhaD family 45 462 2.2E-179 T 12-10-2018 IPR004672 Na+/H+ antiporter NhaD M892_17740 a0da1f0033e6e90605a49bcaa54201e7 476 Pfam PF03600 Citrate transporter 45 420 2.1E-51 T 12-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 M892_02930 4018d8c6d7a84c82e7e9015949a3a74f 538 Pfam PF14891 Effector protein 67 250 2.0E-7 T 12-10-2018 IPR028208 Effector protein NleD-like M892_19555 9cd873dc7dc652701f63ff7cffdda69e 213 SUPERFAMILY SSF53098 50 207 7.71E-49 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_19555 9cd873dc7dc652701f63ff7cffdda69e 213 Gene3D G3DSA:3.30.420.10 39 206 7.8E-18 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M892_19555 9cd873dc7dc652701f63ff7cffdda69e 213 Pfam PF00665 Integrase core domain 52 163 5.6E-26 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 M892_05965 bf6e2e8eb3f0f07ae4ee7818b7874d97 111 SUPERFAMILY SSF103190 15 109 8.24E-19 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily M892_05965 bf6e2e8eb3f0f07ae4ee7818b7874d97 111 Gene3D G3DSA:3.30.450.20 21 111 9.7E-40 T 12-10-2018 M892_05965 bf6e2e8eb3f0f07ae4ee7818b7874d97 111 Gene3D G3DSA:3.30.450.20 8 20 9.7E-40 T 12-10-2018 M892_26880 9d89d3830b61058c06278893d680b290 305 Pfam PF04018 Domain of unknown function (DUF368) 13 257 4.9E-97 T 12-10-2018 IPR007163 Protein of unknown function DUF368 M892_19385 58e9cfe93c0e5ab09794ee9e552c30fd 818 Gene3D G3DSA:3.30.2080.10 313 818 5.9E-115 T 12-10-2018 M892_19385 58e9cfe93c0e5ab09794ee9e552c30fd 818 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 36 546 4.1E-110 T 12-10-2018 IPR005887 Alpha-1,2-mannosidase, putative M892_19385 58e9cfe93c0e5ab09794ee9e552c30fd 818 SUPERFAMILY SSF48208 284 791 2.44E-39 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 M892_19385 58e9cfe93c0e5ab09794ee9e552c30fd 818 Gene3D G3DSA:2.70.98.10 34 312 4.0E-81 T 12-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 M892_19385 58e9cfe93c0e5ab09794ee9e552c30fd 818 Pfam PF07971 Glycosyl hydrolase family 92 262 808 1.7E-144 T 12-10-2018 IPR012939 Glycosyl hydrolase family 92 M892_18045 18ae0bdac7968c5f9b7152b47370415c 170 Pfam PF13527 Acetyltransferase (GNAT) domain 19 130 7.9E-18 T 12-10-2018 M892_18045 18ae0bdac7968c5f9b7152b47370415c 170 SUPERFAMILY SSF55729 18 160 1.11E-23 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_18045 18ae0bdac7968c5f9b7152b47370415c 170 Gene3D G3DSA:3.40.630.30 2 163 4.4E-24 T 12-10-2018 M892_15635 e23e94f607c9fdd4873dc3cfd7694ee4 425 Hamap MF_01845 UPF0597 protein YhaM [yhaM]. 4 425 34.438 T 12-10-2018 IPR021144 Uncharacterised protein family UPF0597 M892_15635 e23e94f607c9fdd4873dc3cfd7694ee4 425 Pfam PF03313 Serine dehydratase alpha chain 149 420 6.1E-52 T 12-10-2018 IPR005130 Serine dehydratase-like, alpha subunit M892_15635 e23e94f607c9fdd4873dc3cfd7694ee4 425 PIRSF PIRSF006054 1 425 4.3E-186 T 12-10-2018 IPR021144 Uncharacterised protein family UPF0597 M892_21590 c79ae3cc4ab27356527c9728498a20ab 349 Gene3D G3DSA:3.30.470.20 98 342 1.4E-30 T 12-10-2018 M892_21590 c79ae3cc4ab27356527c9728498a20ab 349 Pfam PF13535 ATP-grasp domain 173 280 2.1E-12 T 12-10-2018 M892_21590 c79ae3cc4ab27356527c9728498a20ab 349 SUPERFAMILY SSF56059 86 306 8.56E-23 T 12-10-2018 M892_12050 c89a4eb0d0153bd74611a8aad74f9ed3 181 SMART SM00479 7 180 1.2E-24 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III M892_12050 c89a4eb0d0153bd74611a8aad74f9ed3 181 Pfam PF00929 Exonuclease 9 170 5.1E-36 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III M892_12050 c89a4eb0d0153bd74611a8aad74f9ed3 181 Gene3D G3DSA:3.30.420.10 1 181 2.4E-74 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M892_12050 c89a4eb0d0153bd74611a8aad74f9ed3 181 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 44.035 T 12-10-2018 IPR022894 Oligoribonuclease GO:0000175 M892_12050 c89a4eb0d0153bd74611a8aad74f9ed3 181 SUPERFAMILY SSF53098 3 180 9.76E-49 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_10315 e45481c3f1fb60e8f2e46e56a943b525 325 SUPERFAMILY SSF161098 90 302 1.09E-17 T 12-10-2018 IPR035906 MetI-like superfamily M892_10315 e45481c3f1fb60e8f2e46e56a943b525 325 Gene3D G3DSA:1.10.3720.10 84 314 4.0E-20 T 12-10-2018 IPR035906 MetI-like superfamily M892_10315 e45481c3f1fb60e8f2e46e56a943b525 325 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 318 1.4E-39 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M892_14265 f353b3816589e1d4e5ed31da6a598da6 227 SUPERFAMILY SSF49354 33 145 7.33E-16 T 12-10-2018 IPR008962 PapD-like superfamily M892_14265 f353b3816589e1d4e5ed31da6a598da6 227 Gene3D G3DSA:2.60.40.10 32 144 6.5E-6 T 12-10-2018 IPR013783 Immunoglobulin-like fold M892_14265 f353b3816589e1d4e5ed31da6a598da6 227 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 38 146 4.2E-9 T 12-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 M892_00090 cf1c99a1d9b0ffea13ac8d5e8c9999bc 310 SUPERFAMILY SSF53335 9 287 7.23E-53 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M892_00090 cf1c99a1d9b0ffea13ac8d5e8c9999bc 310 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 25 310 1.3E-173 T 12-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 M892_00090 cf1c99a1d9b0ffea13ac8d5e8c9999bc 310 Gene3D G3DSA:3.40.50.150 82 304 8.1E-47 T 12-10-2018 M892_24680 dc7054320413f9fd63c2185548cca962 420 PIRSF PIRSF006060 1 415 5.9E-56 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 M892_24680 dc7054320413f9fd63c2185548cca962 420 SUPERFAMILY SSF56831 254 356 8.37E-6 T 12-10-2018 IPR016029 Inner layer core protein VP3, Reovirus GO:0005198 M892_24680 dc7054320413f9fd63c2185548cca962 420 Pfam PF13520 Amino acid permease 11 391 7.5E-27 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 M892_24680 dc7054320413f9fd63c2185548cca962 420 Gene3D G3DSA:1.20.1740.10 1 419 7.3E-57 T 12-10-2018 M892_16010 f2b3e1a6ccdd8bde0984b963370a4b52 289 Pfam PF13737 Transposase DDE domain 19 129 9.8E-45 T 12-10-2018 IPR025668 Transposase DDE domain M892_22410 65fdf5e93a7d3b21f01bc834229e2f36 491 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 18 490 4.3E-216 T 12-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath M892_22410 65fdf5e93a7d3b21f01bc834229e2f36 491 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 68 490 2.6E-177 T 12-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath M892_07085 e3ac51dadef1b5186ab3944467c4022f 167 PIRSF PIRSF006162 6 166 6.5E-55 T 12-10-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 M892_07085 e3ac51dadef1b5186ab3944467c4022f 167 SUPERFAMILY SSF101307 9 161 6.41E-50 T 12-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 M892_07085 e3ac51dadef1b5186ab3944467c4022f 167 Pfam PF04608 Phosphatidylglycerophosphatase A 15 159 1.6E-53 T 12-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 M892_11500 8dcbb2f4eb9253ae6c3e51a9eb587a7c 126 PRINTS PR01650 Bacterial translocase SecE signature 66 86 7.1E-41 T 12-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 M892_11500 8dcbb2f4eb9253ae6c3e51a9eb587a7c 126 PRINTS PR01650 Bacterial translocase SecE signature 45 66 7.1E-41 T 12-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 M892_11500 8dcbb2f4eb9253ae6c3e51a9eb587a7c 126 PRINTS PR01650 Bacterial translocase SecE signature 90 110 7.1E-41 T 12-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 M892_11500 8dcbb2f4eb9253ae6c3e51a9eb587a7c 126 PRINTS PR01650 Bacterial translocase SecE signature 110 126 7.1E-41 T 12-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 M892_11500 8dcbb2f4eb9253ae6c3e51a9eb587a7c 126 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 72 100 - T 12-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 M892_11500 8dcbb2f4eb9253ae6c3e51a9eb587a7c 126 Gene3D G3DSA:1.20.5.1030 67 123 1.6E-17 T 12-10-2018 IPR038379 SecE superfamily M892_11500 8dcbb2f4eb9253ae6c3e51a9eb587a7c 126 Hamap MF_00422 Protein translocase subunit SecE [secE]. 67 122 13.376 T 12-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 M892_11500 8dcbb2f4eb9253ae6c3e51a9eb587a7c 126 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 70 122 1.5E-17 T 12-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 M892_11500 8dcbb2f4eb9253ae6c3e51a9eb587a7c 126 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 71 121 1.6E-20 T 12-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 M892_23600 4dc5162a0e34d772481d9d6b9ea278d9 141 Pfam PF07366 SnoaL-like polyketide cyclase 14 135 1.8E-12 T 12-10-2018 IPR009959 Polyketide cyclase SnoaL-like GO:0030638 MetaCyc: PWY-7352|MetaCyc: PWY-7354 M892_23600 4dc5162a0e34d772481d9d6b9ea278d9 141 SUPERFAMILY SSF54427 1 138 1.15E-20 T 12-10-2018 IPR032710 NTF2-like domain superfamily M892_23600 4dc5162a0e34d772481d9d6b9ea278d9 141 Gene3D G3DSA:3.10.450.50 1 139 5.9E-20 T 12-10-2018 M892_02565 0242e86f1436a8e731b1f052a5b6ef37 133 SMART SM01022 6 129 1.3E-8 T 12-10-2018 IPR007374 ASCH domain M892_02565 0242e86f1436a8e731b1f052a5b6ef37 133 Gene3D G3DSA:2.30.130.30 2 129 3.2E-16 T 12-10-2018 M892_02565 0242e86f1436a8e731b1f052a5b6ef37 133 SUPERFAMILY SSF88697 1 131 1.04E-24 T 12-10-2018 IPR015947 PUA-like superfamily M892_14155 8af3df43fabff1cb969597f0fc7cd8ed 337 ProSitePatterns PS01276 Peptidase family U32 signature. 163 181 - T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 M892_14155 8af3df43fabff1cb969597f0fc7cd8ed 337 Pfam PF01136 Peptidase family U32 75 336 2.4E-69 T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 M892_25445 1f0accb9429eafbd91ee7a9065fe7ff9 282 SUPERFAMILY SSF50182 96 169 5.23E-10 T 12-10-2018 IPR010920 LSM domain superfamily M892_25445 1f0accb9429eafbd91ee7a9065fe7ff9 282 Pfam PF00924 Mechanosensitive ion channel 60 183 1.2E-15 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 M892_03440 837e727d11deb9f2a2ebacb718473bdb 173 Gene3D G3DSA:3.40.50.150 12 131 1.8E-6 T 12-10-2018 M892_03440 837e727d11deb9f2a2ebacb718473bdb 173 SUPERFAMILY SSF53335 11 159 1.26E-12 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M892_03440 837e727d11deb9f2a2ebacb718473bdb 173 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 76 82 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 M892_22660 f4b0570da0a66c442d63b88ea1f55865 198 PIRSF PIRSF020606 1 197 1.5E-82 T 12-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 M892_22660 f4b0570da0a66c442d63b88ea1f55865 198 Pfam PF09997 Predicted membrane protein (DUF2238) 41 176 1.0E-51 T 12-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 M892_21845 1d3fd5f7e37fa897c0ac978a64a0df07 306 Pfam PF13737 Transposase DDE domain 19 127 1.5E-35 T 12-10-2018 IPR025668 Transposase DDE domain M892_06545 9935b0d76c614b16fa9d3a5aa98f5bae 430 SUPERFAMILY SSF56672 15 352 2.11E-50 T 12-10-2018 M892_06545 9935b0d76c614b16fa9d3a5aa98f5bae 430 Pfam PF08388 Group II intron, maturase-specific domain 288 356 5.4E-15 T 12-10-2018 IPR013597 Group II intron, maturase-specific M892_06545 9935b0d76c614b16fa9d3a5aa98f5bae 430 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 61 74 3.0E-6 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M892_06545 9935b0d76c614b16fa9d3a5aa98f5bae 430 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 187 200 3.0E-6 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M892_06545 9935b0d76c614b16fa9d3a5aa98f5bae 430 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 129 147 3.0E-6 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M892_06545 9935b0d76c614b16fa9d3a5aa98f5bae 430 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 66 272 5.0E-42 T 12-10-2018 IPR000477 Reverse transcriptase domain M892_06545 9935b0d76c614b16fa9d3a5aa98f5bae 430 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 8 350 5.0E-118 T 12-10-2018 IPR030931 Group II intron reverse transcriptase/maturase M892_05880 bb90364d0c70e6f68cd258c7f1db0b67 483 Pfam PF00501 AMP-binding enzyme 16 383 4.7E-50 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 M892_05880 bb90364d0c70e6f68cd258c7f1db0b67 483 Gene3D G3DSA:3.30.300.30 380 482 1.8E-14 T 12-10-2018 M892_05880 bb90364d0c70e6f68cd258c7f1db0b67 483 Gene3D G3DSA:3.40.50.12780 12 379 7.6E-62 T 12-10-2018 M892_05880 bb90364d0c70e6f68cd258c7f1db0b67 483 ProSitePatterns PS00455 Putative AMP-binding domain signature. 166 177 - T 12-10-2018 IPR020845 AMP-binding, conserved site M892_05880 bb90364d0c70e6f68cd258c7f1db0b67 483 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 35 471 5.7E-124 T 12-10-2018 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 M892_05880 bb90364d0c70e6f68cd258c7f1db0b67 483 SUPERFAMILY SSF56801 13 478 1.31E-83 T 12-10-2018 M892_01895 5e71ae049206a946e67bd5a1298f231d 297 SUPERFAMILY SSF52402 15 233 2.3E-53 T 12-10-2018 M892_01895 5e71ae049206a946e67bd5a1298f231d 297 Pfam PF01171 PP-loop family 41 203 5.4E-16 T 12-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 M892_01895 5e71ae049206a946e67bd5a1298f231d 297 Hamap MF_01850 tRNA-cytidine(32) 2-sulfurtransferase [ttcA]. 8 269 56.393 T 12-10-2018 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase GO:0008033 M892_01895 5e71ae049206a946e67bd5a1298f231d 297 Gene3D G3DSA:3.40.50.620 2 268 2.0E-48 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M892_01895 5e71ae049206a946e67bd5a1298f231d 297 PIRSF PIRSF004976 3 283 5.7E-70 T 12-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 M892_22040 cb438895fa0289d8908efc3473ec1420 179 SUPERFAMILY SSF55174 14 87 5.23E-17 T 12-10-2018 M892_22040 cb438895fa0289d8908efc3473ec1420 179 Gene3D G3DSA:3.10.290.10 13 88 5.9E-21 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 M892_22040 cb438895fa0289d8908efc3473ec1420 179 Pfam PF13275 S4 domain 25 86 1.0E-21 T 12-10-2018 M892_04100 ec584f64ce93a51910c29ab870577ec5 139 Pfam PF12680 SnoaL-like domain 10 108 2.9E-12 T 12-10-2018 IPR037401 SnoaL-like domain M892_04100 ec584f64ce93a51910c29ab870577ec5 139 SUPERFAMILY SSF54427 5 131 7.07E-23 T 12-10-2018 IPR032710 NTF2-like domain superfamily M892_04100 ec584f64ce93a51910c29ab870577ec5 139 Gene3D G3DSA:3.10.450.50 4 124 8.8E-21 T 12-10-2018 M892_26680 3f0654bbfe0e9f88e2f93d99ebf2956a 261 SUPERFAMILY SSF56112 2 225 1.27E-31 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily M892_26680 3f0654bbfe0e9f88e2f93d99ebf2956a 261 Gene3D G3DSA:3.90.1200.10 73 254 8.0E-13 T 12-10-2018 M892_26680 3f0654bbfe0e9f88e2f93d99ebf2956a 261 Pfam PF01636 Phosphotransferase enzyme family 111 162 4.4E-12 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase M892_01880 d5b0cb2c36861cd8c96a5d585108588b 225 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 8 213 4.8E-55 T 12-10-2018 IPR039447 Urease accessory protein UreH-like, transmembrane domain M892_23315 734aced03780964634e8f300f6a22c66 331 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 56 329 9.2E-72 T 12-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 M892_23315 734aced03780964634e8f300f6a22c66 331 SUPERFAMILY SSF53187 32 330 2.78E-50 T 12-10-2018 M892_23315 734aced03780964634e8f300f6a22c66 331 Gene3D G3DSA:3.40.630.10 14 329 1.0E-70 T 12-10-2018 M892_23315 734aced03780964634e8f300f6a22c66 331 PIRSF PIRSF039012 9 331 2.3E-92 T 12-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 M892_20505 50f9a7596d14dcc55b2b7fdb07814694 179 Gene3D G3DSA:3.40.30.10 4 164 5.1E-22 T 12-10-2018 M892_20505 50f9a7596d14dcc55b2b7fdb07814694 179 Pfam PF08534 Redoxin 8 147 2.9E-20 T 12-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 M892_20505 50f9a7596d14dcc55b2b7fdb07814694 179 SUPERFAMILY SSF52833 7 176 2.78E-30 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M892_17295 f6b4d46fea057952378cd3ce24bdef16 345 Gene3D G3DSA:1.20.1420.20 30 345 3.0E-75 T 12-10-2018 IPR038352 Imelysin-like domain superfamily M892_17295 f6b4d46fea057952378cd3ce24bdef16 345 Pfam PF09375 Imelysin 47 324 8.8E-43 T 12-10-2018 IPR018976 Imelysin-like domain M892_24385 c4bf0ac7f75eda163733e8d08b3dfc0f 387 Pfam PF06738 Putative threonine/serine exporter 95 230 4.8E-14 T 12-10-2018 IPR010619 Putative threonine/serine exporter M892_24385 c4bf0ac7f75eda163733e8d08b3dfc0f 387 Pfam PF12821 Threonine/Serine exporter, ThrE 257 377 1.1E-7 T 12-10-2018 IPR024528 Threonine/Serine exporter, ThrE M892_14060 f9d199579a029ed1ce6f52739445de4d 209 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 15 208 29.003 T 12-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 M892_14060 f9d199579a029ed1ce6f52739445de4d 209 PIRSF PIRSF005461 1 209 3.9E-80 T 12-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 M892_14060 f9d199579a029ed1ce6f52739445de4d 209 SUPERFAMILY SSF53335 30 209 2.57E-44 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M892_14060 f9d199579a029ed1ce6f52739445de4d 209 Pfam PF01728 FtsJ-like methyltransferase 31 207 3.8E-58 T 12-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 M892_14060 f9d199579a029ed1ce6f52739445de4d 209 Gene3D G3DSA:3.40.50.150 30 209 3.5E-61 T 12-10-2018 M892_04340 389e1f8c246969f7e6259de09a9aa970 267 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M892_04340 389e1f8c246969f7e6259de09a9aa970 267 Gene3D G3DSA:3.40.50.300 3 253 1.6E-64 T 12-10-2018 M892_04340 389e1f8c246969f7e6259de09a9aa970 267 SMART SM00382 32 229 6.4E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain M892_04340 389e1f8c246969f7e6259de09a9aa970 267 Pfam PF00005 ABC transporter 23 172 2.2E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_04340 389e1f8c246969f7e6259de09a9aa970 267 SUPERFAMILY SSF52540 9 239 1.22E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_07120 10717def4cf1efb7b51ff6fc8eeae4da 149 Pfam PF03477 ATP cone domain 50 136 1.1E-17 T 12-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 M892_07120 10717def4cf1efb7b51ff6fc8eeae4da 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 3.8E-73 T 12-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 M892_07120 10717def4cf1efb7b51ff6fc8eeae4da 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 90.421 T 12-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 M892_20670 18ec9a681a7c2425ed0bb1932ff19267 103 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 2 100 3.2E-24 T 12-10-2018 IPR008407 Branched-chain amino acid transport, AzlD M892_11915 351521bebf9a2daa07af45ee9dc80c0c 165 Pfam PF02308 MgtC family 19 141 3.2E-29 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 M892_11915 351521bebf9a2daa07af45ee9dc80c0c 165 PRINTS PR01837 MgtC/SapB protein signature 95 119 9.1E-32 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 M892_11915 351521bebf9a2daa07af45ee9dc80c0c 165 PRINTS PR01837 MgtC/SapB protein signature 22 41 9.1E-32 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 M892_11915 351521bebf9a2daa07af45ee9dc80c0c 165 PRINTS PR01837 MgtC/SapB protein signature 68 90 9.1E-32 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 M892_11915 351521bebf9a2daa07af45ee9dc80c0c 165 PRINTS PR01837 MgtC/SapB protein signature 41 59 9.1E-32 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 M892_04350 b2a7b520c3008e5cfa486a5c7b15b525 244 SUPERFAMILY SSF81345 1 239 1.44E-52 T 12-10-2018 IPR037294 ABC transporter, BtuC-like M892_04350 b2a7b520c3008e5cfa486a5c7b15b525 244 Pfam PF01032 FecCD transport family 1 239 1.2E-58 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 M892_04350 b2a7b520c3008e5cfa486a5c7b15b525 244 Gene3D G3DSA:1.10.3470.10 1 242 9.9E-62 T 12-10-2018 IPR037294 ABC transporter, BtuC-like M892_21395 b8e4bb2fa5f9da57ef6cb0c58c447018 132 Pfam PF03899 ATP synthase I chain 16 111 2.9E-6 T 12-10-2018 IPR005598 ATP synthase protein I M892_25600 326b0ed2d7998e9b49cf3856ae388fc6 400 SUPERFAMILY SSF55486 11 136 1.15E-9 T 12-10-2018 M892_25600 326b0ed2d7998e9b49cf3856ae388fc6 400 SUPERFAMILY SSF49785 245 358 8.93E-18 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily M892_25600 326b0ed2d7998e9b49cf3856ae388fc6 400 Pfam PF01483 Proprotein convertase P-domain 271 355 5.4E-20 T 12-10-2018 IPR002884 P domain GO:0004252|GO:0006508 M892_25600 326b0ed2d7998e9b49cf3856ae388fc6 400 Gene3D G3DSA:2.60.120.260 236 385 8.8E-14 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily M892_04585 8b1daee11b3e951135530ca835ebfb6c 153 Gene3D G3DSA:3.30.420.470 7 147 1.2E-11 T 12-10-2018 M892_04585 8b1daee11b3e951135530ca835ebfb6c 153 Pfam PF13358 DDE superfamily endonuclease 2 118 7.1E-28 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_04585 8b1daee11b3e951135530ca835ebfb6c 153 SUPERFAMILY SSF53098 27 124 2.73E-8 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_00630 517f4e2e8771701b4df97cb62e58b6e4 140 Pfam PF13424 Tetratricopeptide repeat 76 140 7.1E-10 T 12-10-2018 M892_00630 517f4e2e8771701b4df97cb62e58b6e4 140 SUPERFAMILY SSF48452 69 139 5.42E-9 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_00630 517f4e2e8771701b4df97cb62e58b6e4 140 Gene3D G3DSA:1.25.40.10 25 140 3.4E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_18590 d91a1f4e43c42eef5ae9f68cb0e461fc 117 Pfam PF05717 IS66 Orf2 like protein 9 103 1.5E-31 T 12-10-2018 IPR008878 Transposase IS66, Orf2 M892_26220 9f5c569b440c0045b1c7ab9749d63b04 231 Gene3D G3DSA:2.60.40.2130 28 176 6.2E-13 T 12-10-2018 IPR038678 Spondin, N-terminal domain superfamily Reactome: R-HSA-5083635|Reactome: R-HSA-5173214 M892_26220 9f5c569b440c0045b1c7ab9749d63b04 231 Pfam PF06468 Spondin_N 46 164 2.2E-10 T 12-10-2018 IPR009465 Spondin, N-terminal Reactome: R-HSA-5083635|Reactome: R-HSA-5173214 M892_15925 2f8c8cd10ad843ef61cae8cc033ec881 212 Pfam PF01914 MarC family integral membrane protein 8 208 1.3E-65 T 12-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 M892_15925 2f8c8cd10ad843ef61cae8cc033ec881 212 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 3 204 1.7E-66 T 12-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 M892_08060 28202414a39adb1ca8e9594ce0acdd8d 263 Pfam PF01925 Sulfite exporter TauE/SafE 9 261 1.8E-51 T 12-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 M892_16940 3f2c6e0934fbdfdee378487e3d119292 468 Pfam PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase 28 241 6.2E-16 T 12-10-2018 IPR003342 Glycosyl transferase family 39/83 GO:0000030|GO:0006493|GO:0016020 Reactome: R-HSA-5173105 M892_24505 df1e599a832ce983423a16d844447da8 44 Pfam PF09574 Protein of unknown function (Duf2374) 1 42 2.1E-24 T 12-10-2018 IPR014175 Conserved hypothetical protein CHP02808 M892_24505 df1e599a832ce983423a16d844447da8 44 TIGRFAM TIGR02808 short_TIGR02808: TIGR02808 family protein 1 42 7.4E-24 T 12-10-2018 IPR014175 Conserved hypothetical protein CHP02808 M892_07445 9ad5fe60a3998b3c15e6b56887009331 303 Gene3D G3DSA:3.40.640.10 2 187 2.9E-96 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M892_07445 9ad5fe60a3998b3c15e6b56887009331 303 Pfam PF00202 Aminotransferase class-III 2 296 1.4E-62 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 M892_07445 9ad5fe60a3998b3c15e6b56887009331 303 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 98 135 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 M892_07445 9ad5fe60a3998b3c15e6b56887009331 303 SUPERFAMILY SSF53383 1 299 1.02E-74 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M892_07445 9ad5fe60a3998b3c15e6b56887009331 303 Gene3D G3DSA:3.90.1150.10 188 296 2.9E-96 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M892_28570 aeeb89f89dffecc6a868cd42338d191b 112 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 98 2.0E-6 T 12-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family M892_28570 aeeb89f89dffecc6a868cd42338d191b 112 Gene3D G3DSA:3.30.2310.20 1 104 4.3E-5 T 12-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily M892_14800 0910ef34de4843396c19e84a19667d7d 454 SUPERFAMILY SSF161070 10 453 1.7E-118 T 12-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 M892_14800 0910ef34de4843396c19e84a19667d7d 454 Pfam PF00209 Sodium:neurotransmitter symporter family 155 452 3.5E-26 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 M892_14800 0910ef34de4843396c19e84a19667d7d 454 Pfam PF00209 Sodium:neurotransmitter symporter family 10 133 2.5E-21 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 M892_14800 0910ef34de4843396c19e84a19667d7d 454 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 18 39 1.3E-10 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 M892_14800 0910ef34de4843396c19e84a19667d7d 454 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 314 333 1.3E-10 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 M892_14800 0910ef34de4843396c19e84a19667d7d 454 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 47 66 1.3E-10 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 M892_03280 cc939fedeb80d15ccafb4bdc4695e18f 251 Pfam PF09684 Phage tail protein (Tail_P2_I) 17 154 1.9E-21 T 12-10-2018 IPR006521 Tail protein I M892_03280 cc939fedeb80d15ccafb4bdc4695e18f 251 TIGRFAM TIGR01634 tail_P2_I: phage tail protein I 17 145 4.2E-15 T 12-10-2018 IPR006521 Tail protein I M892_00670 c05f2624ecbdce542a82730b49804bfb 293 Gene3D G3DSA:3.40.50.2300 124 251 2.2E-58 T 12-10-2018 M892_00670 c05f2624ecbdce542a82730b49804bfb 293 SUPERFAMILY SSF53822 28 292 2.72E-53 T 12-10-2018 IPR028082 Periplasmic binding protein-like I M892_00670 c05f2624ecbdce542a82730b49804bfb 293 Pfam PF13377 Periplasmic binding protein-like domain 132 292 3.8E-32 T 12-10-2018 M892_00670 c05f2624ecbdce542a82730b49804bfb 293 Gene3D G3DSA:3.40.50.2300 17 268 2.2E-58 T 12-10-2018 M892_03945 0100d5ef8731cf514b167701ad1792dc 212 Pfam PF02698 DUF218 domain 33 148 8.2E-22 T 12-10-2018 IPR003848 Domain of unknown function DUF218 M892_03945 0100d5ef8731cf514b167701ad1792dc 212 Gene3D G3DSA:3.40.50.620 14 152 1.8E-29 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M892_04560 e959150eb90a2d556bb14c4b85c3a914 247 SUPERFAMILY SSF53474 11 243 3.03E-32 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_04560 e959150eb90a2d556bb14c4b85c3a914 247 Pfam PF07859 alpha/beta hydrolase fold 27 116 1.5E-6 T 12-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 M892_04560 e959150eb90a2d556bb14c4b85c3a914 247 Gene3D G3DSA:3.40.50.1820 1 242 3.2E-43 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_27805 50032dd3dc020d3894fc4051f31295ee 261 PIRSF PIRSF028205 1 258 2.4E-115 T 12-10-2018 IPR011220 Uncharacterised conserved protein UCP028205 M892_27805 50032dd3dc020d3894fc4051f31295ee 261 Gene3D G3DSA:2.50.20.10 30 255 2.1E-39 T 12-10-2018 M892_27805 50032dd3dc020d3894fc4051f31295ee 261 Pfam PF17131 Outer membrane lipoprotein-sorting protein 80 254 4.9E-37 T 12-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein M892_01635 27d97e78a366815e55f86227e41fa148 884 Pfam PF02470 MlaD protein 47 138 7.8E-13 T 12-10-2018 IPR003399 Mce/MlaD M892_01635 27d97e78a366815e55f86227e41fa148 884 Pfam PF02470 MlaD protein 647 734 5.7E-6 T 12-10-2018 IPR003399 Mce/MlaD M892_01635 27d97e78a366815e55f86227e41fa148 884 Pfam PF02470 MlaD protein 753 813 5.5E-7 T 12-10-2018 IPR003399 Mce/MlaD M892_01635 27d97e78a366815e55f86227e41fa148 884 Pfam PF02470 MlaD protein 163 222 1.2E-5 T 12-10-2018 IPR003399 Mce/MlaD M892_01635 27d97e78a366815e55f86227e41fa148 884 Pfam PF02470 MlaD protein 282 356 1.4E-6 T 12-10-2018 IPR003399 Mce/MlaD M892_15625 bc1442ff6a8e4c69756dc5fc0751f6b8 232 Pfam PF00230 Major intrinsic protein 2 222 7.1E-50 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 M892_15625 bc1442ff6a8e4c69756dc5fc0751f6b8 232 SUPERFAMILY SSF81338 2 228 3.53E-69 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 M892_15625 bc1442ff6a8e4c69756dc5fc0751f6b8 232 ProSitePatterns PS00221 MIP family signature. 60 68 - T 12-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 M892_15625 bc1442ff6a8e4c69756dc5fc0751f6b8 232 TIGRFAM TIGR00861 MIP: MIP family channel proteins 6 222 5.5E-62 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 M892_15625 bc1442ff6a8e4c69756dc5fc0751f6b8 232 Hamap MF_01146 Aquaporin Z [aqpZ]. 1 229 35.183 T 12-10-2018 IPR023743 Aquaporin Z GO:0006833|GO:0015250|GO:0016021|GO:0055085 M892_15625 bc1442ff6a8e4c69756dc5fc0751f6b8 232 Gene3D G3DSA:1.20.1080.10 1 229 4.7E-86 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 M892_15625 bc1442ff6a8e4c69756dc5fc0751f6b8 232 PRINTS PR00783 Major intrinsic protein family signature 42 66 8.7E-52 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 M892_15625 bc1442ff6a8e4c69756dc5fc0751f6b8 232 PRINTS PR00783 Major intrinsic protein family signature 205 225 8.7E-52 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 M892_15625 bc1442ff6a8e4c69756dc5fc0751f6b8 232 PRINTS PR00783 Major intrinsic protein family signature 2 21 8.7E-52 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 M892_15625 bc1442ff6a8e4c69756dc5fc0751f6b8 232 PRINTS PR00783 Major intrinsic protein family signature 79 98 8.7E-52 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 M892_15625 bc1442ff6a8e4c69756dc5fc0751f6b8 232 PRINTS PR00783 Major intrinsic protein family signature 136 154 8.7E-52 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 M892_15625 bc1442ff6a8e4c69756dc5fc0751f6b8 232 PRINTS PR00783 Major intrinsic protein family signature 166 188 8.7E-52 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 M892_14870 b85562217eff997276f3beb764c5f092 255 Gene3D G3DSA:3.30.2350.10 9 237 6.1E-61 T 12-10-2018 M892_14870 b85562217eff997276f3beb764c5f092 255 Pfam PF00849 RNA pseudouridylate synthase 24 183 1.4E-32 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 M892_14870 b85562217eff997276f3beb764c5f092 255 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 63 77 - T 12-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 M892_14870 b85562217eff997276f3beb764c5f092 255 SUPERFAMILY SSF55120 14 251 7.52E-64 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 M892_09220 996be9dece12785849121657f8c4d005 209 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 204 1.8E-94 T 12-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_09220 996be9dece12785849121657f8c4d005 209 Gene3D G3DSA:2.40.50.620 32 96 2.2E-15 T 12-10-2018 M892_09220 996be9dece12785849121657f8c4d005 209 SUPERFAMILY SSF50447 1 208 5.12E-84 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily M892_09220 996be9dece12785849121657f8c4d005 209 Pfam PF00297 Ribosomal protein L3 66 182 2.2E-16 T 12-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M892_09220 996be9dece12785849121657f8c4d005 209 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 207 40.993 T 12-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M892_09220 996be9dece12785849121657f8c4d005 209 ProSitePatterns PS00474 Ribosomal protein L3 signature. 101 124 - T 12-10-2018 IPR019926 Ribosomal protein L3, conserved site M892_09220 996be9dece12785849121657f8c4d005 209 Gene3D G3DSA:2.40.30.10 128 209 6.7E-20 T 12-10-2018 M892_00885 044c1f8b18b7381f62e405d8fba32058 603 Gene3D G3DSA:2.80.10.50 490 596 7.8E-19 T 12-10-2018 M892_00885 044c1f8b18b7381f62e405d8fba32058 603 Pfam PF16683 Transglutaminase elicitor 95 430 1.6E-43 T 12-10-2018 IPR032048 Transglutaminase elicitor GO:0016755 M892_00885 044c1f8b18b7381f62e405d8fba32058 603 SMART SM00458 488 603 3.5E-8 T 12-10-2018 IPR000772 Ricin B, lectin domain M892_00885 044c1f8b18b7381f62e405d8fba32058 603 SUPERFAMILY SSF50370 499 579 3.2E-16 T 12-10-2018 IPR035992 Ricin B-like lectins M892_00885 044c1f8b18b7381f62e405d8fba32058 603 Pfam PF00652 Ricin-type beta-trefoil lectin domain 498 578 1.1E-12 T 12-10-2018 IPR000772 Ricin B, lectin domain M892_04990 eb03bfdb73f1e151c3c3f705c3661d81 85 Pfam PF03050 Transposase IS66 family 9 85 3.6E-25 T 12-10-2018 IPR004291 Transposase, IS66 M892_27035 93bcf2ca9dd49500af078122dd5a8e06 102 Pfam PF04519 Polymer-forming cytoskeletal 2 67 5.7E-15 T 12-10-2018 IPR007607 Bactofilin A/B M892_01640 58cc5ff42132a90b890bf508ba01e5c8 407 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 5 394 1.9E-105 T 12-10-2018 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type M892_01640 58cc5ff42132a90b890bf508ba01e5c8 407 Pfam PF04403 Paraquat-inducible protein A 240 396 7.3E-48 T 12-10-2018 IPR007498 Intermembrane transport protein PqiA-like M892_01640 58cc5ff42132a90b890bf508ba01e5c8 407 Pfam PF04403 Paraquat-inducible protein A 46 197 2.5E-36 T 12-10-2018 IPR007498 Intermembrane transport protein PqiA-like M892_01640 58cc5ff42132a90b890bf508ba01e5c8 407 SUPERFAMILY SSF48695 204 243 8.22E-5 T 12-10-2018 IPR036280 Multiheme cytochrome superfamily M892_01365 75ec941959580181f58204f21c5b61a0 408 Pfam PF13005 zinc-finger binding domain of transposase IS66 14 58 1.2E-16 T 12-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 M892_01365 75ec941959580181f58204f21c5b61a0 408 Pfam PF13817 IS66 C-terminal element 368 404 5.6E-8 T 12-10-2018 IPR039552 Transposase IS66, C-terminal M892_01365 75ec941959580181f58204f21c5b61a0 408 Pfam PF03050 Transposase IS66 family 78 361 3.7E-99 T 12-10-2018 IPR004291 Transposase, IS66 M892_26900 552cead63d203c992a9f6127c1cc6724 100 Gene3D G3DSA:3.30.1360.60 23 95 5.4E-24 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 M892_26900 552cead63d203c992a9f6127c1cc6724 100 Pfam PF00367 phosphotransferase system, EIIB 26 57 1.1E-12 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 M892_26900 552cead63d203c992a9f6127c1cc6724 100 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 19 82 1.2E-15 T 12-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 M892_26900 552cead63d203c992a9f6127c1cc6724 100 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 35 52 - T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 M892_26900 552cead63d203c992a9f6127c1cc6724 100 SUPERFAMILY SSF55604 23 94 1.7E-20 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 M892_13950 23321bde65f3719c5d8e4291de8d9127 579 SUPERFAMILY SSF81296 2 90 9.8E-17 T 12-10-2018 IPR014756 Immunoglobulin E-set M892_13950 23321bde65f3719c5d8e4291de8d9127 579 Gene3D G3DSA:2.60.40.10 1 93 2.2E-24 T 12-10-2018 IPR013783 Immunoglobulin-like fold M892_13950 23321bde65f3719c5d8e4291de8d9127 579 Pfam PF02927 Cellulase N-terminal ig-like domain 5 83 7.2E-11 T 12-10-2018 IPR004197 Cellulase, Ig-like domain GO:0005975|GO:0008810 M892_13950 23321bde65f3719c5d8e4291de8d9127 579 Gene3D G3DSA:1.50.10.10 94 579 6.6E-235 T 12-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 M892_13950 23321bde65f3719c5d8e4291de8d9127 579 SUPERFAMILY SSF48208 77 565 6.43E-93 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 M892_13950 23321bde65f3719c5d8e4291de8d9127 579 Pfam PF00759 Glycosyl hydrolase family 9 99 500 6.3E-23 T 12-10-2018 IPR001701 Glycoside hydrolase family 9 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 M892_20490 75d56436704c31aae597c767ac673edd 214 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 61 74 2.5E-7 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M892_20490 75d56436704c31aae597c767ac673edd 214 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 129 147 2.5E-7 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M892_20490 75d56436704c31aae597c767ac673edd 214 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 187 200 2.5E-7 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M892_20490 75d56436704c31aae597c767ac673edd 214 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 205 214 2.5E-7 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M892_20490 75d56436704c31aae597c767ac673edd 214 SUPERFAMILY SSF56672 14 208 5.25E-32 T 12-10-2018 M892_20490 75d56436704c31aae597c767ac673edd 214 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 66 212 9.0E-30 T 12-10-2018 IPR000477 Reverse transcriptase domain M892_03415 3cdb298dcff24d1604ee3dd88995d3b9 323 Pfam PF06147 Protein of unknown function (DUF968) 125 320 3.5E-68 T 12-10-2018 IPR010373 Protein of unknown function DUF968 M892_08530 cb57eb6d721c99dd6d22a09152a533a8 216 ProSitePatterns PS00893 Nudix box signature. 96 117 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 M892_08530 cb57eb6d721c99dd6d22a09152a533a8 216 Pfam PF00293 NUDIX domain 58 175 2.1E-10 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 M892_08530 cb57eb6d721c99dd6d22a09152a533a8 216 Gene3D G3DSA:3.90.79.10 1 208 9.4E-64 T 12-10-2018 M892_08530 cb57eb6d721c99dd6d22a09152a533a8 216 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 14 198 2.8E-65 T 12-10-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 M892_08530 cb57eb6d721c99dd6d22a09152a533a8 216 SUPERFAMILY SSF55811 10 204 2.98E-46 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 M892_11355 af72c666edf3690ae72db334730dacab 447 Pfam PF01554 MatE 24 184 2.1E-24 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M892_11355 af72c666edf3690ae72db334730dacab 447 Pfam PF01554 MatE 251 399 2.5E-13 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M892_11355 af72c666edf3690ae72db334730dacab 447 TIGRFAM TIGR00797 matE: MATE efflux family protein 24 418 5.7E-73 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M892_07170 f3ac30b6e5eb6746e3ecbbbb4f6b9307 166 Pfam PF11810 Domain of unknown function (DUF3332) 2 162 2.8E-41 T 12-10-2018 IPR021768 Protein of unknown function DUF3332 M892_00580 ce2ff5e48b5798ab172aa275c1746b01 399 SUPERFAMILY SSF53098 1 378 1.29E-52 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_00580 ce2ff5e48b5798ab172aa275c1746b01 399 Pfam PF01609 Transposase DDE domain 92 327 2.4E-16 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_20040 bfad7712e538574a60a012c04b16edbf 122 Pfam PF02371 Transposase IS116/IS110/IS902 family 1 80 2.3E-18 T 12-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 M892_25925 bfad7712e538574a60a012c04b16edbf 122 Pfam PF02371 Transposase IS116/IS110/IS902 family 1 80 2.3E-18 T 12-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 M892_16865 bfad7712e538574a60a012c04b16edbf 122 Pfam PF02371 Transposase IS116/IS110/IS902 family 1 80 2.3E-18 T 12-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 M892_23910 0168ec42efa067692f109a560694c0cc 123 Pfam PF16068 Domain of unknown function (DUF4810) 25 108 3.2E-22 T 12-10-2018 IPR014508 Uncharacterised conserved protein withTPR-like repeats M892_02435 393cc59381f6d54910608314bd63fe77 220 PIRSF PIRSF028063 1 220 2.7E-138 T 12-10-2018 IPR014538 Uncharacterised conserved protein, topoisomerase zinc finger M892_02435 393cc59381f6d54910608314bd63fe77 220 Pfam PF10881 Protein of unknown function (DUF2726) 38 160 4.1E-35 T 12-10-2018 IPR024402 Domain of unknown function DUF2726 M892_03675 2706da3248542835ad6dcc012f881801 571 Pfam PF00563 EAL domain 358 567 6.9E-42 T 12-10-2018 IPR001633 EAL domain M892_03675 2706da3248542835ad6dcc012f881801 571 SMART SM00052 343 571 1.3E-16 T 12-10-2018 IPR001633 EAL domain M892_03675 2706da3248542835ad6dcc012f881801 571 SUPERFAMILY SSF141868 358 567 2.62E-47 T 12-10-2018 IPR035919 EAL domain superfamily M892_03675 2706da3248542835ad6dcc012f881801 571 Gene3D G3DSA:3.20.20.450 344 569 6.7E-46 T 12-10-2018 IPR035919 EAL domain superfamily M892_04270 27c26405d1ca0b54e3c82a8374a26986 650 Pfam PF03235 Protein of unknown function DUF262 286 418 4.5E-17 T 12-10-2018 IPR004919 Domain of unknown function DUF262 M892_25280 4b6bb461ab71e8045207b16667fb8252 271 SUPERFAMILY SSF52540 7 209 2.82E-5 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_25280 4b6bb461ab71e8045207b16667fb8252 271 Pfam PF10364 Putative capsular polysaccharide synthesis protein 120 255 4.2E-49 T 12-10-2018 IPR018831 Uncharacterised protein family NKWYS M892_03605 d66c1f2c46ba3cd19c5d68196b30d71a 157 Pfam PF11163 Protein of unknown function (DUF2947) 3 154 2.6E-70 T 12-10-2018 IPR021334 Protein of unknown function DUF2947 M892_15085 180da977b2ad3f2edbc27b81811d9805 146 Pfam PF09842 Predicted membrane protein (DUF2069) 21 122 3.9E-34 T 12-10-2018 IPR018643 Protein of unknown function DUF2069, membrane M892_18550 37a0edff21457a85a044856b57438e4c 258 Pfam PF01863 Protein of unknown function DUF45 38 249 4.8E-56 T 12-10-2018 IPR002725 Protein of unknown function DUF45 M892_18550 37a0edff21457a85a044856b57438e4c 258 Gene3D G3DSA:3.30.2010.10 160 254 1.9E-20 T 12-10-2018 M892_21525 736087653ea5dceb8238735a8f2dcae0 121 SUPERFAMILY SSF53098 1 115 8.35E-30 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_21525 736087653ea5dceb8238735a8f2dcae0 121 Pfam PF13683 Integrase core domain 43 109 6.4E-13 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 M892_21525 736087653ea5dceb8238735a8f2dcae0 121 Gene3D G3DSA:3.30.420.10 1 120 1.2E-7 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M892_13890 18f8d76dd8961ed9126d0985f745ad89 303 Pfam PF01548 Transposase 8 142 4.2E-15 T 12-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 M892_13890 18f8d76dd8961ed9126d0985f745ad89 303 Pfam PF02371 Transposase IS116/IS110/IS902 family 212 288 2.3E-15 T 12-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 M892_15795 6846e6ad112111ab22c5a1b163ff7541 273 Pfam PF11207 Protein of unknown function (DUF2989) 16 218 7.7E-75 T 12-10-2018 IPR021372 Protein of unknown function DUF2989 M892_08170 26db9a73dbab38929ea2e2f47e06b008 61 Pfam PF12065 Protein of unknown function (DUF3545) 1 60 6.8E-25 T 12-10-2018 IPR021932 Protein of unknown function DUF3545 M892_08055 73efdf8b3332a303671a4289efa99e63 273 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 142 154 - T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 M892_08055 73efdf8b3332a303671a4289efa99e63 273 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 262 20.117 T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 M892_08055 73efdf8b3332a303671a4289efa99e63 273 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 13 257 5.9E-83 T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 M892_08055 73efdf8b3332a303671a4289efa99e63 273 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 4 262 2.6E-90 T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 M892_15660 db4ffdc28e864c3a75fe3301a2c57530 219 Gene3D G3DSA:1.10.443.10 7 201 2.0E-15 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 M892_15660 db4ffdc28e864c3a75fe3301a2c57530 219 SUPERFAMILY SSF56349 35 195 3.83E-8 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 M892_18200 d5870dc289c1375daf57a093af2b70d3 163 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 149 2.5E-11 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain M892_18200 d5870dc289c1375daf57a093af2b70d3 163 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 12-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 M892_18200 d5870dc289c1375daf57a093af2b70d3 163 SUPERFAMILY SSF54593 1 155 2.82E-22 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M892_18200 d5870dc289c1375daf57a093af2b70d3 163 Gene3D G3DSA:3.10.180.10 1 161 5.3E-22 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M892_16110 9d56099bbe8f34094c1dfa95709624b2 147 Pfam PF00589 Phage integrase family 30 79 6.0E-6 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 M892_16110 9d56099bbe8f34094c1dfa95709624b2 147 Gene3D G3DSA:1.10.443.10 8 81 7.4E-8 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 M892_16110 9d56099bbe8f34094c1dfa95709624b2 147 SUPERFAMILY SSF56349 30 79 5.89E-8 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 M892_15640 2c065582cc272292507c165c7077f71d 218 Pfam PF08348 YheO-like PAS domain 14 119 2.0E-32 T 12-10-2018 IPR013559 YheO-like M892_15640 2c065582cc272292507c165c7077f71d 218 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 12 114 7.0E-52 T 12-10-2018 IPR013559 YheO-like M892_15640 2c065582cc272292507c165c7077f71d 218 Pfam PF13309 HTH domain 156 213 6.9E-15 T 12-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain M892_24890 3dd02e93862786e22f49f75404db673b 118 Gene3D G3DSA:1.10.3830.10 3 118 1.5E-40 T 12-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 M892_24890 3dd02e93862786e22f49f75404db673b 118 Pfam PF01219 Prokaryotic diacylglycerol kinase 16 117 4.7E-36 T 12-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 M892_24890 3dd02e93862786e22f49f75404db673b 118 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 70 81 - T 12-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 M892_18330 261294482fd714b11e818ddd4ccdd788 156 SUPERFAMILY SSF56784 4 141 1.26E-23 T 12-10-2018 IPR036412 HAD-like superfamily M892_18330 261294482fd714b11e818ddd4ccdd788 156 Gene3D G3DSA:3.40.50.1000 1 156 1.8E-29 T 12-10-2018 IPR023214 HAD superfamily M892_18330 261294482fd714b11e818ddd4ccdd788 156 Pfam PF13419 Haloacid dehalogenase-like hydrolase 24 130 1.8E-12 T 12-10-2018 M892_09630 9a0a0d218a1429feab4ddd8b854230da 141 PIRSF PIRSF029598 3 135 6.9E-39 T 12-10-2018 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 M892_09630 9a0a0d218a1429feab4ddd8b854230da 141 Pfam PF06146 Phosphate-starvation-inducible E 51 117 1.5E-14 T 12-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like M892_11215 f63a9fc9edf8f0d24e9c094cd78f352c 164 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 109 119 - T 12-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 M892_11215 f63a9fc9edf8f0d24e9c094cd78f352c 164 SUPERFAMILY SSF52799 13 161 2.58E-30 T 12-10-2018 IPR029021 Protein-tyrosine phosphatase-like M892_11215 f63a9fc9edf8f0d24e9c094cd78f352c 164 Gene3D G3DSA:3.90.190.10 5 164 1.8E-30 T 12-10-2018 IPR029021 Protein-tyrosine phosphatase-like M892_11215 f63a9fc9edf8f0d24e9c094cd78f352c 164 Pfam PF05706 Cyclin-dependent kinase inhibitor 3 (CDKN3) 27 128 6.7E-9 T 12-10-2018 IPR022778 CDKN3 domain GO:0004721|GO:0004725 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 M892_24510 4d32f3900deb5dd3a6b2444aef6c2e15 514 Pfam PF13005 zinc-finger binding domain of transposase IS66 120 164 1.6E-16 T 12-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 M892_24510 4d32f3900deb5dd3a6b2444aef6c2e15 514 Pfam PF03050 Transposase IS66 family 184 467 1.4E-101 T 12-10-2018 IPR004291 Transposase, IS66 M892_24510 4d32f3900deb5dd3a6b2444aef6c2e15 514 Pfam PF13007 Transposase C of IS166 homeodomain 42 112 2.2E-14 T 12-10-2018 IPR024463 Transposase TnpC, homeodomain M892_24510 4d32f3900deb5dd3a6b2444aef6c2e15 514 Pfam PF13817 IS66 C-terminal element 474 510 7.6E-8 T 12-10-2018 IPR039552 Transposase IS66, C-terminal M892_02735 a95675df9f32ce1c21e34084da054942 266 SUPERFAMILY SSF81301 63 217 1.42E-16 T 12-10-2018 M892_02735 a95675df9f32ce1c21e34084da054942 266 Gene3D G3DSA:3.30.460.10 61 192 4.0E-6 T 12-10-2018 M892_08905 2f69a4d13bd7bb4c1c8726508bd9c977 927 Pfam PF11874 Domain of unknown function (DUF3394) 742 921 1.6E-69 T 12-10-2018 IPR021814 Protein of unknown function DUF3394 M892_08905 2f69a4d13bd7bb4c1c8726508bd9c977 927 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 100 795 1.5E-211 T 12-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ M892_08905 2f69a4d13bd7bb4c1c8726508bd9c977 927 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 203 735 4.0E-76 T 12-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit M892_13990 5dd1b4bad8c038a3bf1a963f650e09ea 361 Pfam PF01594 AI-2E family transporter 14 347 3.9E-53 T 12-10-2018 IPR002549 Transmembrane protein TqsA-like M892_07660 75d2514747e537cd716e19c3c7b4f3f0 315 SUPERFAMILY SSF82866 73 293 4.97E-41 T 12-10-2018 M892_07660 75d2514747e537cd716e19c3c7b4f3f0 315 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 117 282 5.1E-56 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial M892_07660 75d2514747e537cd716e19c3c7b4f3f0 315 Pfam PF07549 SecD/SecF GG Motif 35 60 7.3E-11 T 12-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site M892_07660 75d2514747e537cd716e19c3c7b4f3f0 315 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 39 285 6.0E-86 T 12-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 M892_07660 75d2514747e537cd716e19c3c7b4f3f0 315 Pfam PF02355 Protein export membrane protein 111 292 1.4E-70 T 12-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial M892_07660 75d2514747e537cd716e19c3c7b4f3f0 315 Gene3D G3DSA:1.20.1640.10 105 300 3.6E-12 T 12-10-2018 M892_07660 75d2514747e537cd716e19c3c7b4f3f0 315 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 11 296 28.673 T 12-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 M892_07660 75d2514747e537cd716e19c3c7b4f3f0 315 PRINTS PR01755 Bacterial translocase SecF protein signature 233 248 3.9E-32 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial M892_07660 75d2514747e537cd716e19c3c7b4f3f0 315 PRINTS PR01755 Bacterial translocase SecF protein signature 38 53 3.9E-32 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial M892_07660 75d2514747e537cd716e19c3c7b4f3f0 315 PRINTS PR01755 Bacterial translocase SecF protein signature 201 219 3.9E-32 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial M892_07660 75d2514747e537cd716e19c3c7b4f3f0 315 PRINTS PR01755 Bacterial translocase SecF protein signature 153 167 3.9E-32 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial M892_05750 8341c51500c4ca29b12d5401b2432919 44 Pfam PF13817 IS66 C-terminal element 6 40 1.6E-7 T 12-10-2018 IPR039552 Transposase IS66, C-terminal M892_09520 75e791389167245637017827d58e2126 241 Pfam PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) 2 175 6.9E-42 T 12-10-2018 IPR002654 Glycosyl transferase, family 25 M892_18405 a380bb10e2a86000eab0648f9017ffdd 447 Pfam PF01523 Putative modulator of DNA gyrase 24 312 3.9E-44 T 12-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 M892_18405 a380bb10e2a86000eab0648f9017ffdd 447 SUPERFAMILY SSF111283 8 445 4.19E-94 T 12-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 M892_18405 a380bb10e2a86000eab0648f9017ffdd 447 Gene3D G3DSA:3.30.2290.10 3 213 1.5E-33 T 12-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal M892_24455 168dd3ab99f6c47658d85abf0067c754 286 PIRSF PIRSF028200 12 286 1.9E-90 T 12-10-2018 IPR016875 Uncharacterised conserved protein UCP028200 M892_15175 1e67641e0e37fcd2df55985171ea7bcb 161 Pfam PF11143 Protein of unknown function (DUF2919) 3 147 4.1E-55 T 12-10-2018 IPR021318 Protein of unknown function DUF2919 M892_04950 f0adbdc2f51ed15cc795729df79d52ff 466 SUPERFAMILY SSF55486 192 335 1.37E-8 T 12-10-2018 M892_04950 f0adbdc2f51ed15cc795729df79d52ff 466 Pfam PF13583 Metallo-peptidase family M12B Reprolysin-like 247 325 5.8E-6 T 12-10-2018 M892_04950 f0adbdc2f51ed15cc795729df79d52ff 466 Gene3D G3DSA:3.40.390.10 128 371 5.3E-6 T 12-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 M892_14035 9ca38c27909ee9d521fe2340e7069ebc 288 Gene3D G3DSA:1.10.357.20 101 285 6.2E-53 T 12-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain M892_14035 9ca38c27909ee9d521fe2340e7069ebc 288 SUPERFAMILY SSF161093 106 285 2.62E-44 T 12-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 M892_14035 9ca38c27909ee9d521fe2340e7069ebc 288 Pfam PF01769 Divalent cation transporter 149 278 8.8E-27 T 12-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 M892_26340 1487899a9e598d4e88e5059ebf83b671 122 PRINTS PR00956 Flagellar motor switch protein FliN signature 60 76 5.6E-18 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 M892_26340 1487899a9e598d4e88e5059ebf83b671 122 PRINTS PR00956 Flagellar motor switch protein FliN signature 89 104 5.6E-18 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 M892_26340 1487899a9e598d4e88e5059ebf83b671 122 PRINTS PR00956 Flagellar motor switch protein FliN signature 43 59 5.6E-18 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 M892_26340 1487899a9e598d4e88e5059ebf83b671 122 PRINTS PR00956 Flagellar motor switch protein FliN signature 76 89 5.6E-18 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 M892_26340 1487899a9e598d4e88e5059ebf83b671 122 Gene3D G3DSA:2.30.330.10 32 118 2.2E-23 T 12-10-2018 IPR036429 SpoA-like superfamily M892_26340 1487899a9e598d4e88e5059ebf83b671 122 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 45 112 4.9E-20 T 12-10-2018 IPR001543 Surface presentation of antigen (SpoA) M892_26340 1487899a9e598d4e88e5059ebf83b671 122 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 41 115 7.9E-29 T 12-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 M892_26340 1487899a9e598d4e88e5059ebf83b671 122 SUPERFAMILY SSF101801 40 114 4.71E-19 T 12-10-2018 IPR036429 SpoA-like superfamily M892_02760 7212af2713dcd2ea694a199634dab948 317 Pfam PF01032 FecCD transport family 27 312 1.6E-32 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 M892_02760 7212af2713dcd2ea694a199634dab948 317 Gene3D G3DSA:1.10.3470.10 3 316 1.5E-34 T 12-10-2018 IPR037294 ABC transporter, BtuC-like M892_02760 7212af2713dcd2ea694a199634dab948 317 SUPERFAMILY SSF81345 11 312 5.62E-37 T 12-10-2018 IPR037294 ABC transporter, BtuC-like M892_06970 df2f5216cfff08672a996e408a5067a3 304 Gene3D G3DSA:3.90.780.10 2 219 2.9E-38 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M892_06970 df2f5216cfff08672a996e408a5067a3 304 Pfam PF02872 5'-nucleotidase, C-terminal domain 11 174 2.3E-18 T 12-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M892_06970 df2f5216cfff08672a996e408a5067a3 304 SUPERFAMILY SSF55816 5 215 1.19E-24 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M892_14145 fbc7e36eefa8bcde4093abbddbb1f866 448 Pfam PF01554 MatE 240 398 7.2E-13 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M892_14145 fbc7e36eefa8bcde4093abbddbb1f866 448 Pfam PF01554 MatE 15 176 1.1E-22 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M892_14145 fbc7e36eefa8bcde4093abbddbb1f866 448 PIRSF PIRSF006603 1 441 5.5E-67 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M892_14145 fbc7e36eefa8bcde4093abbddbb1f866 448 TIGRFAM TIGR00797 matE: MATE efflux family protein 15 410 7.2E-49 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M892_04470 28468a5f6c1141b66187b8e76266de3b 605 SUPERFAMILY SSF103388 347 604 3.79E-89 T 12-10-2018 IPR036139 Virulence-associated V antigen superfamily GO:0005576|GO:0009405 M892_04470 28468a5f6c1141b66187b8e76266de3b 605 Pfam PF04792 V antigen (LcrV) protein 416 604 2.2E-28 T 12-10-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 M892_04470 28468a5f6c1141b66187b8e76266de3b 605 PRINTS PR01592 Low calcium response V antigen signature 418 438 2.3E-12 T 12-10-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 M892_04470 28468a5f6c1141b66187b8e76266de3b 605 PRINTS PR01592 Low calcium response V antigen signature 580 602 2.3E-12 T 12-10-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 M892_04470 28468a5f6c1141b66187b8e76266de3b 605 PRINTS PR01592 Low calcium response V antigen signature 561 580 2.3E-12 T 12-10-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 M892_02815 5de58d15122c3259d2195f7628411f75 113 Pfam PF05717 IS66 Orf2 like protein 9 93 4.7E-30 T 12-10-2018 IPR008878 Transposase IS66, Orf2 M892_06590 54c0d5a564e7bda9ab12a1837b33f4ed 131 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 5 129 2.3E-27 T 12-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 M892_06590 54c0d5a564e7bda9ab12a1837b33f4ed 131 PIRSF PIRSF002889 1 131 4.2E-31 T 12-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 M892_24245 4ed4bba0e488e84729a48972cf310d0d 385 SUPERFAMILY SSF53098 8 372 9.1E-56 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_24245 4ed4bba0e488e84729a48972cf310d0d 385 Pfam PF01609 Transposase DDE domain 130 293 1.2E-15 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_19500 67344cc2fee87cf2dcff056d86fc7d83 89 ProDom PD028709 MEMBRANE INNER YDGC GLPM ALGINATE BIOSYNTHESIS TRANSMEMBRANE REQUIRED FOR UNCHARACTERIZED 15 89 7.0E-29 T 12-10-2018 IPR009707 Membrane protein GlpM/YdgC M892_19500 67344cc2fee87cf2dcff056d86fc7d83 89 Pfam PF06942 GlpM protein 6 87 3.2E-38 T 12-10-2018 IPR009707 Membrane protein GlpM/YdgC M892_15315 a5dbabf921b1f7bc6dc8eda17c60e2b1 260 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 12 255 1.2E-74 T 12-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 M892_15315 a5dbabf921b1f7bc6dc8eda17c60e2b1 260 Pfam PF01311 Bacterial export proteins, family 1 13 243 5.8E-57 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 M892_15315 a5dbabf921b1f7bc6dc8eda17c60e2b1 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 81 100 4.6E-16 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 M892_15315 a5dbabf921b1f7bc6dc8eda17c60e2b1 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 4.6E-16 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 M892_15315 a5dbabf921b1f7bc6dc8eda17c60e2b1 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 203 222 4.6E-16 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 M892_15315 a5dbabf921b1f7bc6dc8eda17c60e2b1 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 181 203 4.6E-16 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 M892_14995 cc010cba59eeb4ecc466df29b2cefada 228 Pfam PF06930 Protein of unknown function (DUF1282) 14 223 2.4E-42 T 12-10-2018 IPR009698 Protein of unknown function DUF1282 M892_22165 e17c8638726dd9189f31404f5ad1ab7e 170 Gene3D G3DSA:3.20.20.450 17 162 1.1E-13 T 12-10-2018 IPR035919 EAL domain superfamily M892_22165 e17c8638726dd9189f31404f5ad1ab7e 170 Pfam PF00563 EAL domain 24 148 5.8E-13 T 12-10-2018 IPR001633 EAL domain M892_22165 e17c8638726dd9189f31404f5ad1ab7e 170 SUPERFAMILY SSF141868 27 160 4.84E-12 T 12-10-2018 IPR035919 EAL domain superfamily M892_17965 8e8a2a0114e56738bc5dd6ed0208665c 294 Gene3D G3DSA:1.10.3720.10 19 285 2.0E-56 T 12-10-2018 IPR035906 MetI-like superfamily M892_17965 8e8a2a0114e56738bc5dd6ed0208665c 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 277 6.8E-19 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M892_17965 8e8a2a0114e56738bc5dd6ed0208665c 294 SUPERFAMILY SSF161098 25 294 1.13E-61 T 12-10-2018 IPR035906 MetI-like superfamily M892_15180 9c98086e98b57af6c5e0a84d3e3a2e6e 300 SUPERFAMILY SSF54909 1 297 3.04E-93 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel M892_15180 9c98086e98b57af6c5e0a84d3e3a2e6e 300 Pfam PF04261 Dyp-type peroxidase family 5 293 3.9E-89 T 12-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 M892_15180 9c98086e98b57af6c5e0a84d3e3a2e6e 300 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 5 293 4.7E-83 T 12-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 M892_22145 63eba19b0829f3c719cd51618eab20a0 99 Gene3D G3DSA:3.20.20.450 1 98 2.1E-23 T 12-10-2018 IPR035919 EAL domain superfamily M892_22145 63eba19b0829f3c719cd51618eab20a0 99 Pfam PF00563 EAL domain 2 87 1.7E-21 T 12-10-2018 IPR001633 EAL domain M892_22145 63eba19b0829f3c719cd51618eab20a0 99 SUPERFAMILY SSF141868 2 94 1.31E-23 T 12-10-2018 IPR035919 EAL domain superfamily M892_27190 75a311883b164a54af65db1512f24dd7 111 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 11 98 5.8E-5 T 12-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family M892_18650 cf0ff77ca6e4f20ef01b93985c6e535c 206 Pfam PF02371 Transposase IS116/IS110/IS902 family 80 164 3.2E-18 T 12-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 M892_28520 60821cc428f853960c3358dab7e98a49 60 Pfam PF05509 TraY domain 12 59 1.7E-22 T 12-10-2018 IPR008876 Relaxosome protein TraY GO:0000746|GO:0003677 M892_28520 60821cc428f853960c3358dab7e98a49 60 SUPERFAMILY SSF47598 15 51 7.41E-5 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 M892_24180 3ad17f06128b141ccc33d96e191f5485 198 SUPERFAMILY SSF52540 2 173 7.45E-26 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_24180 3ad17f06128b141ccc33d96e191f5485 198 Pfam PF00005 ABC transporter 3 138 2.5E-18 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M892_24180 3ad17f06128b141ccc33d96e191f5485 198 Gene3D G3DSA:3.40.50.300 1 189 2.3E-31 T 12-10-2018 M892_14785 11cae2ffa1a7585e825ba8efa8cc1bca 253 Pfam PF11101 Protein of unknown function (DUF2884) 27 251 5.2E-73 T 12-10-2018 IPR021307 Protein of unknown function DUF2884 M892_15790 bfa06f3783d4a8a4f6e47083612b4de2 137 Pfam PF01641 SelR domain 16 133 4.0E-54 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 M892_15790 bfa06f3783d4a8a4f6e47083612b4de2 137 SUPERFAMILY SSF51316 9 136 6.28E-59 T 12-10-2018 IPR011057 Mss4-like superfamily M892_15790 bfa06f3783d4a8a4f6e47083612b4de2 137 Gene3D G3DSA:2.170.150.20 2 137 3.6E-61 T 12-10-2018 M892_15790 bfa06f3783d4a8a4f6e47083612b4de2 137 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 11 134 1.1E-57 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 M892_15790 bfa06f3783d4a8a4f6e47083612b4de2 137 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 12 135 37.578 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 M892_02065 eb9663b80d484f61a9c0a2a9bc539f82 88 Pfam PF11173 Protein of unknown function (DUF2960) 1 77 2.4E-36 T 12-10-2018 IPR021343 Protein of unknown function DUF2960 M892_00895 afa5ad3bf6cadba0fee6852441f0a37a 437 Pfam PF06629 MltA-interacting protein MipA 45 240 1.2E-22 T 12-10-2018 IPR010583 MltA-interacting MipA M892_22325 8ae3012ee3b3d363fc62ce8e1aed46f1 454 SUPERFAMILY SSF56219 32 450 9.87E-14 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily M892_22325 8ae3012ee3b3d363fc62ce8e1aed46f1 454 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 37 445 1.4E-25 T 12-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase M892_05390 275b8fc9c4b5d1332a098fe842df11ff 325 Gene3D G3DSA:2.40.128.140 20 323 5.8E-53 T 12-10-2018 IPR037107 Putative outer membrane protein superfamily M892_05390 275b8fc9c4b5d1332a098fe842df11ff 325 Pfam PF09982 Uncharacterized protein conserved in bacteria (DUF2219) 28 322 1.4E-83 T 12-10-2018 IPR018707 Protein of unknown function DUF2219 M892_06690 ebd8d0702b86222df927be08e53bad01 310 Pfam PF01963 TraB family 46 299 3.2E-55 T 12-10-2018 IPR002816 Pheromone shutdown, TraB M892_11935 60b3b7016934bc28ff3f297145323d2e 227 Pfam PF00881 Nitroreductase family 33 202 1.2E-21 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 M892_11935 60b3b7016934bc28ff3f297145323d2e 227 SUPERFAMILY SSF55469 20 226 5.89E-42 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 M892_11935 60b3b7016934bc28ff3f297145323d2e 227 Gene3D G3DSA:3.40.109.10 4 226 4.3E-50 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 M892_03340 318d0eb6e0fd1f52ea532a759301a395 69 SUPERFAMILY SSF64210 1 57 3.53E-13 T 12-10-2018 IPR036626 Head-to-tail joining protein W superfamily GO:0019058 M892_03340 318d0eb6e0fd1f52ea532a759301a395 69 Pfam PF02831 gpW 1 67 6.3E-22 T 12-10-2018 IPR004174 Head-to-tail joining protein W GO:0019058 M892_03340 318d0eb6e0fd1f52ea532a759301a395 69 Gene3D G3DSA:3.30.1580.10 1 63 1.4E-27 T 12-10-2018 IPR036626 Head-to-tail joining protein W superfamily GO:0019058 M892_03340 318d0eb6e0fd1f52ea532a759301a395 69 ProDom PD019366 PROPHAGE HEAD JOINING GP3 COMPLETION HEAD-TO-TAIL W PROPHAGE-DERIVED DNA HEAD-TAIL 25 66 3.0E-5 T 12-10-2018 IPR004174 Head-to-tail joining protein W GO:0019058 M892_27390 b48a71517f9e43ace8af67a7e6b74ea4 306 Pfam PF13737 Transposase DDE domain 19 129 2.9E-45 T 12-10-2018 IPR025668 Transposase DDE domain M892_03505 2d380becbbafe1baa7ab5c91cbde5efe 43 Pfam PF01527 Transposase 3 42 2.3E-5 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 M892_03505 2d380becbbafe1baa7ab5c91cbde5efe 43 SUPERFAMILY SSF48295 1 42 8.89E-11 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 M892_21050 f777cfa47bd3775d2e6d325018cb5ba5 280 Pfam PF00482 Type II secretion system (T2SS), protein F 142 269 2.4E-16 T 12-10-2018 IPR018076 Type II secretion system F domain M892_26060 0391c24dff6dc312645c6c5be257ca04 238 Pfam PF05944 Phage small terminase subunit 37 166 5.2E-35 T 12-10-2018 IPR010270 Bacteriophage P2, GpM GO:0003677|GO:0004519|GO:0019069 M892_19050 c48a5ce76fc4daf5bd950c7f44455a4d 359 Pfam PF01764 Lipase (class 3) 197 302 1.9E-7 T 12-10-2018 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: R-HSA-426048 M892_19050 c48a5ce76fc4daf5bd950c7f44455a4d 359 SUPERFAMILY SSF53474 133 330 9.99E-19 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_19050 c48a5ce76fc4daf5bd950c7f44455a4d 359 Gene3D G3DSA:3.40.50.1820 117 356 4.3E-13 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_01625 49375e19d2bbff8bd218d7011580c3f2 277 Gene3D G3DSA:1.10.10.10 215 277 5.4E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_01625 49375e19d2bbff8bd218d7011580c3f2 277 PIRSF PIRSF012524 1 277 1.5E-96 T 12-10-2018 IPR014464 Conserved virulence factor B M892_01625 49375e19d2bbff8bd218d7011580c3f2 277 Pfam PF13509 S1 domain 4 63 3.3E-22 T 12-10-2018 IPR039566 Conserved virulence factor B, S1 domain M892_01625 49375e19d2bbff8bd218d7011580c3f2 277 Pfam PF13509 S1 domain 71 132 5.9E-5 T 12-10-2018 IPR039566 Conserved virulence factor B, S1 domain M892_00360 6c508b642a2c3586c03ce3c81daed32d 301 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 134 299 2.0E-73 T 12-10-2018 IPR005642 Lysine exporter LysO M892_00360 6c508b642a2c3586c03ce3c81daed32d 301 Pfam PF03956 Lysine exporter LysO 112 297 2.9E-51 T 12-10-2018 IPR005642 Lysine exporter LysO M892_04075 dba512694921f83d5e2325e4adfee356 169 Pfam PF11086 Protein of unknown function (DUF2878) 3 148 6.6E-31 T 12-10-2018 IPR021306 Protein of unknown function DUF2878 M892_03705 4143c27d2da22309d29f109feb0828f5 102 SUPERFAMILY SSF58104 8 94 1.05E-6 T 12-10-2018 M892_03705 4143c27d2da22309d29f109feb0828f5 102 Gene3D G3DSA:1.10.287.950 2 97 6.1E-6 T 12-10-2018 M892_18745 6b4a4c6c05c5df02543b8bf3702aee28 61 Pfam PF16357 Putative PepSY_TM-like 10 59 3.6E-13 T 12-10-2018 IPR032307 Putative PepSY TM-like protein M892_19775 6cd8b2bdac3d3bedee2a7648a4eb3a8a 173 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 5 173 1.5E-60 T 12-10-2018 IPR018636 Protein of unknown function DUF2058 M892_22985 de7357896d8aa9cc19916a6e8bcaca22 93 Pfam PF10115 Transcriptional activator HlyU 2 92 6.0E-40 T 12-10-2018 IPR018772 Transcription activator HlyU M892_10510 bb3ac7092bf05e186740e5351357714d 417 Pfam PF00155 Aminotransferase class I and II 67 395 9.4E-28 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 M892_10510 bb3ac7092bf05e186740e5351357714d 417 SUPERFAMILY SSF53383 13 411 4.21E-61 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M892_10510 bb3ac7092bf05e186740e5351357714d 417 Gene3D G3DSA:3.40.640.10 1 415 1.0E-148 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M892_04225 938401c008f3405d33abd39c5973cb47 314 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 2 147 7.2E-25 T 12-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase M892_25015 155ad01c0e7395792f928fee8d553672 371 Pfam PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family 47 335 2.9E-39 T 12-10-2018 IPR029132 Choloylglycine hydrolase/NAAA C-terminal M892_25015 155ad01c0e7395792f928fee8d553672 371 Gene3D G3DSA:3.60.60.10 44 360 1.8E-71 T 12-10-2018 M892_25015 155ad01c0e7395792f928fee8d553672 371 SUPERFAMILY SSF56235 47 339 7.1E-56 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal M892_25465 7de79eea7170674acacf40f4f56d119a 163 Pfam PF10517 Electron transfer DM13 59 154 1.5E-18 T 12-10-2018 IPR019545 DM13 domain M892_05970 5b7e0c2467b12218181be04adcd04200 54 SUPERFAMILY SSF46689 20 49 1.79E-5 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_05970 5b7e0c2467b12218181be04adcd04200 54 Gene3D G3DSA:1.10.10.60 12 51 2.5E-6 T 12-10-2018 M892_07645 46de045c66ad2426c07b273b2df384bd 239 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 238 7.5E-83 T 12-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 M892_07645 46de045c66ad2426c07b273b2df384bd 239 Gene3D G3DSA:3.40.1280.10 1 163 7.7E-62 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal M892_07645 46de045c66ad2426c07b273b2df384bd 239 PIRSF PIRSF004808 1 239 1.6E-71 T 12-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 M892_07645 46de045c66ad2426c07b273b2df384bd 239 Gene3D G3DSA:1.10.8.590 173 239 3.8E-28 T 12-10-2018 M892_07645 46de045c66ad2426c07b273b2df384bd 239 SUPERFAMILY SSF75217 5 175 3.34E-37 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases M892_07645 46de045c66ad2426c07b273b2df384bd 239 Pfam PF00588 SpoU rRNA Methylase family 5 153 1.3E-34 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 M892_25630 78e433f8eb1c812f8d472d14e714d0d8 82 PIRSF PIRSF002855 1 82 9.6E-32 T 12-10-2018 IPR016367 Murein-lipoprotein M892_25630 78e433f8eb1c812f8d472d14e714d0d8 82 Pfam PF04728 Lipoprotein leucine-zipper 30 82 1.3E-24 T 12-10-2018 IPR006817 Lipoprotein leucine-zipper GO:0019867 M892_25630 78e433f8eb1c812f8d472d14e714d0d8 82 Gene3D G3DSA:1.20.5.190 23 81 8.3E-13 T 12-10-2018 M892_25630 78e433f8eb1c812f8d472d14e714d0d8 82 SUPERFAMILY SSF58042 29 81 2.88E-16 T 12-10-2018 M892_16650 3b1b6c284dd36c82cf1072039dc47821 97 Pfam PF06305 Lipopolysaccharide assembly protein A domain 22 81 2.7E-17 T 12-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 M892_16650 3b1b6c284dd36c82cf1072039dc47821 97 Hamap MF_01948 Lipopolysaccharide assembly protein A [lapA]. 1 93 20.446 T 12-10-2018 IPR032906 Lipopolysaccharide assembly protein A GO:0005886|GO:0008653 M892_02620 13b2e144398b98c9c1a0026d3404b40b 193 Pfam PF07209 Protein of unknown function (DUF1415) 17 185 6.3E-66 T 12-10-2018 IPR009858 Protein of unknown function DUF1415 M892_06455 48002747e6cf5017347fc5a5a3bc869a 140 Pfam PF10973 Protein of unknown function (DUF2799) 48 129 3.2E-12 T 12-10-2018 IPR021242 Protein of unknown function DUF2799 M892_09435 453e83ef252939833b9f4a1ba8efd94f 720 Pfam PF06082 Exopolysaccharide biosynthesis protein YbjH 21 705 2.3E-256 T 12-10-2018 IPR010344 Exopolysaccharide biosynthesis protein YbjH M892_20300 7d21e97c38e36235841a4149b774ba27 120 SUPERFAMILY SSF54593 2 119 1.25E-22 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M892_20300 7d21e97c38e36235841a4149b774ba27 120 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 115 1.8E-7 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain M892_20300 7d21e97c38e36235841a4149b774ba27 120 Gene3D G3DSA:3.10.180.10 1 119 9.6E-32 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M892_21200 549af77576364f055ec1a79d551cd9b1 225 Pfam PF09335 SNARE associated Golgi protein 55 173 9.1E-17 T 12-10-2018 IPR032816 SNARE associated Golgi protein M892_06005 7f7dcde87e82757fadc2bd9bbac28aaf 455 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 42 427 8.2E-124 T 12-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 M892_06005 7f7dcde87e82757fadc2bd9bbac28aaf 455 Pfam PF02386 Cation transport protein 53 437 2.8E-57 T 12-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 M892_00390 558c2cdcb0108e29ceebaec0b95ac531 420 Pfam PF06097 Bacterial protein of unknown function (DUF945) 5 410 1.1E-41 T 12-10-2018 IPR010352 Protein of unknown function DUF945 M892_22385 e2dc10b03917065c0e162e6740d81394 330 Pfam PF09937 Uncharacterized protein conserved in bacteria (DUF2169) 24 302 3.8E-70 T 12-10-2018 IPR018683 Domain of unknown function DUF2169 M892_24365 1c8529486e6608164b0594bff20a05ef 411 Pfam PF12704 MacB-like periplasmic core domain 19 227 1.5E-14 T 12-10-2018 IPR025857 MacB-like periplasmic core domain M892_24365 1c8529486e6608164b0594bff20a05ef 411 Pfam PF02687 FtsX-like permease family 299 403 2.3E-10 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 M892_03910 02f3b986ee0a35f9335c3be604176685 266 Pfam PF03649 Uncharacterised protein family (UPF0014) 9 245 1.6E-73 T 12-10-2018 IPR005226 UPF0014 family M892_22465 a732d1a11edba35e14ca0666ec84e64c 263 Gene3D G3DSA:1.25.40.590 44 201 1.9E-47 T 12-10-2018 IPR038522 Type IV / VI secretion system, DotU superfamily M892_22465 a732d1a11edba35e14ca0666ec84e64c 263 Pfam PF09850 Type VI secretion system protein DotU 47 246 2.3E-50 T 12-10-2018 IPR017732 Type IV / VI secretion system, DotU M892_22465 a732d1a11edba35e14ca0666ec84e64c 263 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 46 253 2.2E-61 T 12-10-2018 IPR017732 Type IV / VI secretion system, DotU M892_20345 26f3abc76a6d9756a0004db29ef2f336 463 Gene3D G3DSA:1.20.1600.10 40 448 3.9E-42 T 12-10-2018 M892_20345 26f3abc76a6d9756a0004db29ef2f336 463 SUPERFAMILY SSF56954 15 448 1.29E-49 T 12-10-2018 M892_20345 26f3abc76a6d9756a0004db29ef2f336 463 Pfam PF02321 Outer membrane efflux protein 48 230 1.3E-6 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 M892_20345 26f3abc76a6d9756a0004db29ef2f336 463 Pfam PF02321 Outer membrane efflux protein 267 446 8.2E-17 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 M892_10140 cd0ab2cf4b9ac917643b25946d1b3f8a 175 Pfam PF00210 Ferritin-like domain 8 143 5.3E-39 T 12-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 M892_10140 cd0ab2cf4b9ac917643b25946d1b3f8a 175 Gene3D G3DSA:1.20.1260.10 1 175 1.2E-52 T 12-10-2018 IPR012347 Ferritin-like M892_10140 cd0ab2cf4b9ac917643b25946d1b3f8a 175 SUPERFAMILY SSF47240 1 160 1.21E-57 T 12-10-2018 IPR009078 Ferritin-like superfamily M892_16945 84e50bb94fe911a5aa2be77c2fcba36b 134 Pfam PF04138 GtrA-like protein 12 131 1.4E-21 T 12-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 M892_21275 1c6d6cb2752454d42c4fee95cc161987 245 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 25 231 2.1E-57 T 12-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 M892_21275 1c6d6cb2752454d42c4fee95cc161987 245 Pfam PF04973 Nicotinamide mononucleotide transporter 25 228 5.1E-54 T 12-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 M892_09935 636979f9965c87c0c579ebbd932f1782 180 Pfam PF04220 Der GTPase activator (YihI) 21 170 7.0E-46 T 12-10-2018 IPR007336 Der GTPase activator GO:0005096 M892_09935 636979f9965c87c0c579ebbd932f1782 180 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 1 173 16.534 T 12-10-2018 IPR007336 Der GTPase activator GO:0005096 M892_27295 c4ae3a1cdcd9c7bad1715a0b8a1066e5 306 Pfam PF13737 Transposase DDE domain 19 129 2.9E-45 T 12-10-2018 IPR025668 Transposase DDE domain M892_27135 bdf496608e01e3b2107f8f08095186f4 100 ProDom PD080812 PLASMID Y4OB BMEII097 AGR_L_107P MLL2216 BMEII0977 ATU4831 13 87 2.0E-5 T 12-10-2018 IPR020358 Uncharacterised protein family Y4oB M892_24390 f62601a2988a9eb7a2515317f4a997bc 96 Pfam PF03889 Domain of unknown function 22 59 4.0E-22 T 12-10-2018 IPR005589 Alternative ribosome-rescue factor A GO:0072344 M892_08350 2366da0a612c50d8502bb7190b548acc 152 Pfam PF05258 Protein of unknown function (DUF721) 11 85 8.3E-13 T 12-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 M892_25915 0bc652b836dbf263997a431160b8de38 44 Gene3D G3DSA:3.90.180.10 1 44 5.2E-8 T 12-10-2018 M892_04565 1aaad384e75acc279dbece8d1e16db9f 554 Gene3D G3DSA:3.30.1460.10 3 115 5.5E-16 T 12-10-2018 M892_04565 1aaad384e75acc279dbece8d1e16db9f 554 SUPERFAMILY SSF69635 5 129 1.73E-27 T 12-10-2018 M892_04565 1aaad384e75acc279dbece8d1e16db9f 554 Pfam PF05932 Tir chaperone protein (CesT) family 5 110 9.6E-18 T 12-10-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 M892_19955 3372b0c8ff516d7d51f6f0d0af4e7127 448 Pfam PF07394 Protein of unknown function (DUF1501) 41 417 2.4E-37 T 12-10-2018 IPR010869 Protein of unknown function DUF1501 M892_04610 4774f7a4cf25021023d80816daf1efd0 211 Pfam PF02108 Flagellar assembly protein FliH 83 194 2.9E-18 T 12-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE M892_04610 4774f7a4cf25021023d80816daf1efd0 211 TIGRFAM TIGR02499 HrpE_YscL_not: type III secretion apparatus protein, HrpE/YscL family 19 187 1.2E-39 T 12-10-2018 IPR012842 Type III secretion system HrpE/YscL M892_04610 4774f7a4cf25021023d80816daf1efd0 211 SUPERFAMILY SSF160527 99 204 2.88E-5 T 12-10-2018 M892_10080 f985b3057880a7dba55d1d4602863007 209 Pfam PF02371 Transposase IS116/IS110/IS902 family 83 167 6.3E-20 T 12-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 M892_25025 50ec2fce25e969eba6409ec95652ef33 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 1.6E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_25025 50ec2fce25e969eba6409ec95652ef33 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 1.6E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_25025 50ec2fce25e969eba6409ec95652ef33 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 1.6E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_25025 50ec2fce25e969eba6409ec95652ef33 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 4.9E-25 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_25025 50ec2fce25e969eba6409ec95652ef33 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 4.9E-25 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_25025 50ec2fce25e969eba6409ec95652ef33 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 4.9E-25 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_25025 50ec2fce25e969eba6409ec95652ef33 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 4.9E-25 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_25025 50ec2fce25e969eba6409ec95652ef33 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 4.9E-25 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_25025 50ec2fce25e969eba6409ec95652ef33 259 PIRSF PIRSF000126 1 259 6.5E-71 T 12-10-2018 M892_25025 50ec2fce25e969eba6409ec95652ef33 259 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 189 0.0037 T 12-10-2018 M892_25025 50ec2fce25e969eba6409ec95652ef33 259 Pfam PF00106 short chain dehydrogenase 3 190 6.4E-50 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_25025 50ec2fce25e969eba6409ec95652ef33 259 SUPERFAMILY SSF51735 3 222 6.23E-58 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_25025 50ec2fce25e969eba6409ec95652ef33 259 Gene3D G3DSA:3.40.50.720 2 239 5.6E-59 T 12-10-2018 M892_14705 0a18811dca8eb0d62541a875c9b7cdf1 189 Pfam PF03923 Uncharacterized lipoprotein 28 186 1.8E-51 T 12-10-2018 IPR005619 Uncharacterised protein family, YajG M892_07745 e5b9cf1f1e7454e13ecb796e03eb877d 557 Gene3D G3DSA:1.10.3720.10 285 550 6.0E-30 T 12-10-2018 IPR035906 MetI-like superfamily M892_07745 e5b9cf1f1e7454e13ecb796e03eb877d 557 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 288 548 4.7E-76 T 12-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 M892_07745 e5b9cf1f1e7454e13ecb796e03eb877d 557 SUPERFAMILY SSF161098 285 538 2.49E-35 T 12-10-2018 IPR035906 MetI-like superfamily M892_07745 e5b9cf1f1e7454e13ecb796e03eb877d 557 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 324 476 1.5E-17 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M892_07515 8089871d8882de593b08dd1dd5e0681d 197 Pfam PF01184 GPR1/FUN34/yaaH family 3 177 3.2E-36 T 12-10-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 M892_07515 8089871d8882de593b08dd1dd5e0681d 197 ProSitePatterns PS01114 GPR1/FUN34/yaaH family signature. 7 16 - T 12-10-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 M892_00765 2e70932e771142f2a20e2eaa46e57b75 255 Pfam PF03741 Integral membrane protein TerC family 16 203 2.5E-44 T 12-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 M892_26550 a0fac781be2672a66e22dcf54cc221d4 906 Pfam PF10101 Predicted membrane protein (DUF2339) 142 893 7.6E-104 T 12-10-2018 IPR019286 Protein of unknown function DUF2339, transmembrane M892_26550 a0fac781be2672a66e22dcf54cc221d4 906 PIRSF PIRSF035905 1 904 6.6E-220 T 12-10-2018 IPR014600 Uncharacterised conserved protein UCP035905, membrane protein M892_14150 f4d552968b06b88cfb8cd4e6d5d1ee44 302 Pfam PF01136 Peptidase family U32 91 245 2.5E-12 T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 M892_08045 746864b2cc26c83ed486df0075900e55 197 Pfam PF01548 Transposase 8 142 1.3E-15 T 12-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 M892_08930 a28f0dbb61300e8ccdc5126889a15057 212 SUPERFAMILY SSF52507 12 208 3.79E-57 T 12-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 M892_08930 a28f0dbb61300e8ccdc5126889a15057 212 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 12 209 34.893 T 12-10-2018 IPR004507 Flavin prenyltransferase UbiX-like M892_08930 a28f0dbb61300e8ccdc5126889a15057 212 Pfam PF02441 Flavoprotein 13 188 4.6E-26 T 12-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 M892_08930 a28f0dbb61300e8ccdc5126889a15057 212 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 14 207 4.1E-57 T 12-10-2018 IPR004507 Flavin prenyltransferase UbiX-like M892_08930 a28f0dbb61300e8ccdc5126889a15057 212 Gene3D G3DSA:3.40.50.1950 4 210 5.4E-78 T 12-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 M892_09320 d4c4a43b0360e0275944442edcf5a462 360 TIGRFAM TIGR02380 ECA_wecA: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 3 345 1.6E-159 T 12-10-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819|MetaCyc: PWY-7905 M892_09320 d4c4a43b0360e0275944442edcf5a462 360 Pfam PF00953 Glycosyl transferase family 4 69 227 4.4E-28 T 12-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 M892_09320 d4c4a43b0360e0275944442edcf5a462 360 Hamap MF_02030 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase [wecA]. 4 349 26.809 T 12-10-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819|MetaCyc: PWY-7905 M892_27425 5fa168f0f9a4db73f13431eb4e94fdef 197 Pfam PF07007 Lysozyme inhibitor LprI 28 108 2.9E-5 T 12-10-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal M892_23310 b23b1624d8a294f0df40df290304eaae 186 Pfam PF03606 C4-dicarboxylate anaerobic carrier 4 181 1.4E-52 T 12-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 M892_19450 df80d008fbc7cbe086a13a16628330c4 295 SUPERFAMILY SSF103481 38 137 1.7E-15 T 12-10-2018 M892_19450 df80d008fbc7cbe086a13a16628330c4 295 Pfam PF00892 EamA-like transporter family 9 136 1.3E-17 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M892_19450 df80d008fbc7cbe086a13a16628330c4 295 Pfam PF00892 EamA-like transporter family 155 281 8.5E-20 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M892_19450 df80d008fbc7cbe086a13a16628330c4 295 SUPERFAMILY SSF103481 187 283 6.93E-17 T 12-10-2018 M892_17270 c5e8575dac5c3a145658056583a73fb0 136 Pfam PF03918 Cytochrome C biogenesis protein 27 135 5.8E-40 T 12-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family M892_17270 c5e8575dac5c3a145658056583a73fb0 136 Gene3D G3DSA:1.10.8.640 28 113 1.0E-31 T 12-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily M892_09270 7f8e27cbb64820003cc04077dd2590d8 80 Gene3D G3DSA:1.20.5.340 1 79 1.5E-28 T 12-10-2018 M892_09270 7f8e27cbb64820003cc04077dd2590d8 80 Hamap MF_01196 Cell division protein ZapB [zapB]. 1 79 17.94 T 12-10-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 M892_09270 7f8e27cbb64820003cc04077dd2590d8 80 Pfam PF06005 Cell division protein ZapB 1 78 1.8E-24 T 12-10-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 M892_16395 c02d5ab5a04215ad9ae7d67434583179 174 Pfam PF02620 Uncharacterized ACR, COG1399 62 173 9.3E-16 T 12-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD M892_28575 0d13be174a0c58ec4d12316e36d1c7c7 81 SUPERFAMILY SSF143120 1 69 1.27E-8 T 12-10-2018 IPR036165 YefM-like superfamily M892_11705 33d6e617911ff11af80ca8abd1720e6a 510 Pfam PF00665 Integrase core domain 142 267 4.1E-16 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 M892_11705 33d6e617911ff11af80ca8abd1720e6a 510 SUPERFAMILY SSF53098 167 302 3.29E-6 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_00020 c0e4a84241b86b56a2921a53b30bdbe4 141 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 1 123 2.0E-23 T 12-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ M892_15740 0f430566105f829d0266ee87b1412ef5 73 SUPERFAMILY SSF53098 1 67 1.38E-15 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_15740 0f430566105f829d0266ee87b1412ef5 73 Pfam PF13683 Integrase core domain 8 61 1.0E-11 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 M892_02945 97b79714f56ca23765f89ad15558abb3 257 Pfam PF03496 ADP-ribosyltransferase exoenzyme 46 215 1.5E-12 T 12-10-2018 IPR003540 ADP ribosyltransferase GO:0005576|GO:0009405 M892_02945 97b79714f56ca23765f89ad15558abb3 257 Gene3D G3DSA:3.90.176.10 18 222 1.7E-31 T 12-10-2018 M892_02945 97b79714f56ca23765f89ad15558abb3 257 SUPERFAMILY SSF56399 35 221 1.34E-38 T 12-10-2018 M892_26080 233ac11d30a00e48d4b4b8a11112a647 335 TIGRFAM TIGR01540 portal_PBSX: phage portal protein, PBSX family 45 318 2.7E-64 T 12-10-2018 IPR006430 Phage portal protein PBSX family M892_26080 233ac11d30a00e48d4b4b8a11112a647 335 Pfam PF04860 Phage portal protein 90 332 7.4E-8 T 12-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein M892_03930 61a0c3c6ba5aaf0bdf0bb3251ceed1fa 140 Pfam PF05232 Chlorhexidine efflux transporter 69 131 4.3E-22 T 12-10-2018 IPR007896 Chlorhexidine efflux transporter M892_03930 61a0c3c6ba5aaf0bdf0bb3251ceed1fa 140 Pfam PF05232 Chlorhexidine efflux transporter 1 63 1.1E-23 T 12-10-2018 IPR007896 Chlorhexidine efflux transporter M892_15105 9316596e0fdde5821a5dc8e9fb21b500 81 SUPERFAMILY SSF64307 4 71 2.62E-8 T 12-10-2018 IPR036868 TusA-like domain superfamily M892_15105 9316596e0fdde5821a5dc8e9fb21b500 81 Pfam PF01206 Sulfurtransferase TusA 6 71 4.5E-10 T 12-10-2018 IPR001455 TusA-like domain M892_15105 9316596e0fdde5821a5dc8e9fb21b500 81 Gene3D G3DSA:3.30.110.40 1 76 5.2E-6 T 12-10-2018 IPR036868 TusA-like domain superfamily M892_09675 db10defb879a1fb1f76b7dcf287a9ffc 135 Gene3D G3DSA:3.30.420.270 61 129 8.2E-10 T 12-10-2018 M892_09675 db10defb879a1fb1f76b7dcf287a9ffc 135 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 133 1.4E-32 T 12-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 M892_10550 5ec26573ee638a999331655e200fa713 223 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 112 1.7E-24 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 M892_10550 5ec26573ee638a999331655e200fa713 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 217 2.6E-17 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M892_10550 5ec26573ee638a999331655e200fa713 223 SUPERFAMILY SSF161098 13 203 4.32E-43 T 12-10-2018 IPR035906 MetI-like superfamily M892_10550 5ec26573ee638a999331655e200fa713 223 Gene3D G3DSA:1.10.3720.10 1 222 1.3E-52 T 12-10-2018 IPR035906 MetI-like superfamily M892_11540 304f1e004c5cad0b001145cfb8c73a85 163 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 3 153 5.2E-55 T 12-10-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 M892_11540 304f1e004c5cad0b001145cfb8c73a85 163 Gene3D G3DSA:1.20.120.1370 1 156 2.9E-52 T 12-10-2018 IPR038309 Rsd/AlgQ superfamily M892_11540 304f1e004c5cad0b001145cfb8c73a85 163 PIRSF PIRSF016548 3 163 2.8E-69 T 12-10-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 M892_16915 d2b8c6938b1738a034b920c97848ee33 298 PIRSF PIRSF006278 2 296 8.1E-24 T 12-10-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase M892_16915 d2b8c6938b1738a034b920c97848ee33 298 SUPERFAMILY SSF53686 9 295 3.84E-53 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme M892_16915 d2b8c6938b1738a034b920c97848ee33 298 Gene3D G3DSA:3.40.50.1100 33 137 2.5E-23 T 12-10-2018 M892_16915 d2b8c6938b1738a034b920c97848ee33 298 Gene3D G3DSA:3.40.50.1100 14 284 2.5E-23 T 12-10-2018 M892_03290 3e67439dfc6d00853ae99e3f7f6a2d40 116 SUPERFAMILY SSF160719 10 69 7.98E-5 T 12-10-2018 M892_19175 7cf91a6fefbc4b6dd43fb0a6bacd6dda 96 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 73 3.8E-18 T 12-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain M892_19175 7cf91a6fefbc4b6dd43fb0a6bacd6dda 96 SUPERFAMILY SSF54909 1 79 6.8E-25 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel M892_19175 7cf91a6fefbc4b6dd43fb0a6bacd6dda 96 Gene3D G3DSA:3.30.70.100 1 92 5.7E-26 T 12-10-2018 M892_10390 ecbfeaff2ee4d7206bb4bec07a4d4a75 83 Pfam PF04380 Membrane fusogenic activity 1 78 3.0E-27 T 12-10-2018 IPR007475 Membrane fusogenic activity M892_05275 7108d7894fe68038ef8a68161b402989 158 Pfam PF05433 Glycine zipper 2TM domain 63 97 4.1E-8 T 12-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 M892_25260 b3049d291765566a432fdee5fec1bb16 210 SUPERFAMILY SSF46689 16 131 5.97E-26 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_25260 b3049d291765566a432fdee5fec1bb16 210 Pfam PF13551 Winged helix-turn helix 32 87 9.9E-9 T 12-10-2018 M892_25260 b3049d291765566a432fdee5fec1bb16 210 Pfam PF13592 Winged helix-turn helix 98 155 3.0E-20 T 12-10-2018 IPR025959 Winged helix-turn helix domain M892_02940 9a49b1a019139050a750ad0062317ade 246 Gene3D G3DSA:3.90.176.10 25 219 2.8E-18 T 12-10-2018 M892_02940 9a49b1a019139050a750ad0062317ade 246 Pfam PF03496 ADP-ribosyltransferase exoenzyme 72 207 2.3E-12 T 12-10-2018 IPR003540 ADP ribosyltransferase GO:0005576|GO:0009405 M892_02940 9a49b1a019139050a750ad0062317ade 246 SUPERFAMILY SSF56399 48 217 6.08E-38 T 12-10-2018 M892_12285 38bac4b66ad3026da0c2bcc3f766ef67 317 SUPERFAMILY SSF56235 9 312 1.26E-96 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal M892_12285 38bac4b66ad3026da0c2bcc3f766ef67 317 Pfam PF01112 Asparaginase 11 314 1.7E-109 T 12-10-2018 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 M892_12285 38bac4b66ad3026da0c2bcc3f766ef67 317 Gene3D G3DSA:3.60.20.30 182 317 6.8E-47 T 12-10-2018 M892_27835 a4e68895096ea086a1f2a679b081dc00 128 Pfam PF04134 Protein of unknown function, DUF393 6 112 7.6E-26 T 12-10-2018 IPR007263 Protein of unknown function DUF393 M892_03530 1e130d8a31ad35f27c7bacba63a5860b 113 Pfam PF05717 IS66 Orf2 like protein 9 93 4.7E-30 T 12-10-2018 IPR008878 Transposase IS66, Orf2 M892_21785 cf31f3e6f4e341c0fa55edaabc894221 86 Gene3D G3DSA:1.20.120.1930 1 86 1.1E-38 T 12-10-2018 M892_21785 cf31f3e6f4e341c0fa55edaabc894221 86 Pfam PF16691 Domain of unknown function (DUF5062) 6 86 1.7E-30 T 12-10-2018 IPR032036 Protein of unknown function DUF5062 M892_27510 ad038322134708649e5c56d084b1c099 235 Gene3D G3DSA:3.40.605.10 41 218 4.2E-9 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 M892_27510 ad038322134708649e5c56d084b1c099 235 SUPERFAMILY SSF53720 9 180 2.75E-11 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 M892_24240 3955ec0e4cbe7dde37e1d994f7a3e432 141 Gene3D G3DSA:3.40.630.30 39 141 4.2E-26 T 12-10-2018 M892_24240 3955ec0e4cbe7dde37e1d994f7a3e432 141 Pfam PF00583 Acetyltransferase (GNAT) family 13 119 5.3E-12 T 12-10-2018 IPR000182 GNAT domain M892_24240 3955ec0e4cbe7dde37e1d994f7a3e432 141 SUPERFAMILY SSF55729 10 141 5.83E-29 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_22765 502e7b93e82ca9e29894ce44325375a0 127 Pfam PF11782 Protein of unknown function (DUF3319) 1 89 2.8E-43 T 12-10-2018 IPR021753 Protein of unknown function DUF3319 M892_18760 b0c7f418d54bd6cf9fac94b516355c60 179 Pfam PF10029 Predicted periplasmic protein (DUF2271) 38 170 5.4E-47 T 12-10-2018 IPR014469 Protein of unknown function DUF2271 M892_18760 b0c7f418d54bd6cf9fac94b516355c60 179 Gene3D G3DSA:2.60.40.4070 92 149 1.3E-9 T 12-10-2018 M892_18760 b0c7f418d54bd6cf9fac94b516355c60 179 PIRSF PIRSF014995 8 179 2.6E-67 T 12-10-2018 IPR014469 Protein of unknown function DUF2271 M892_00910 2ab4ba9a6b0924dc7d864bc18f8c6306 283 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 2 276 7.8E-51 T 12-10-2018 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 M892_04735 f0a80fe75e8418dab2254a203b4bfd5f 116 SUPERFAMILY SSF46689 16 114 1.02E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M892_15380 a58388cb7f35b70377837436fd854d11 163 Pfam PF10975 Protein of unknown function (DUF2802) 68 135 1.2E-22 T 12-10-2018 IPR021244 Protein of unknown function DUF2802 M892_16725 443b3aeff3a0621b193570df2fb314fd 115 SUPERFAMILY SSF55729 7 101 1.13E-21 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_16725 443b3aeff3a0621b193570df2fb314fd 115 Gene3D G3DSA:3.40.630.30 1 102 2.8E-34 T 12-10-2018 M892_16725 443b3aeff3a0621b193570df2fb314fd 115 Pfam PF13673 Acetyltransferase (GNAT) domain 14 100 6.6E-11 T 12-10-2018 IPR000182 GNAT domain M892_09515 ec3cb32834cdbe3ed941d9f3065cf71e 159 PIRSF PIRSF000441 17 159 7.5E-33 T 12-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 M892_09515 ec3cb32834cdbe3ed941d9f3065cf71e 159 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 101 134 2.7E-8 T 12-10-2018 IPR001451 Hexapeptide repeat M892_09515 ec3cb32834cdbe3ed941d9f3065cf71e 159 SUPERFAMILY SSF51161 27 145 6.52E-27 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily M892_09515 ec3cb32834cdbe3ed941d9f3065cf71e 159 Gene3D G3DSA:2.160.10.10 50 159 2.7E-23 T 12-10-2018 M892_27760 228358803fe064ee57fa14b7cdbc9da8 69 Pfam PF11686 Protein of unknown function (DUF3283) 4 64 7.6E-34 T 12-10-2018 IPR021700 Protein of unknown function DUF3283 M892_10965 e01790038b1e8cca3523366de5a088ba 86 Pfam PF10048 Predicted integral membrane protein (DUF2282) 33 82 1.9E-23 T 12-10-2018 IPR018740 Protein of unknown function DUF2282, integral membrane M892_22105 1831ed9a54a11ec417081a375c1df4f5 157 Pfam PF05981 CreA protein 22 144 9.7E-43 T 12-10-2018 IPR010292 Uncharacterised protein family CreA M892_22105 1831ed9a54a11ec417081a375c1df4f5 157 PIRSF PIRSF003174 1 154 6.3E-48 T 12-10-2018 IPR010292 Uncharacterised protein family CreA M892_11680 e10be441c8ef8bb248188d412f14fec1 222 Pfam PF13358 DDE superfamily endonuclease 111 190 7.0E-17 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_11680 e10be441c8ef8bb248188d412f14fec1 222 Pfam PF13358 DDE superfamily endonuclease 6 82 1.1E-16 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain M892_11680 e10be441c8ef8bb248188d412f14fec1 222 Gene3D G3DSA:3.30.420.470 105 216 2.4E-5 T 12-10-2018 M892_11680 e10be441c8ef8bb248188d412f14fec1 222 Gene3D G3DSA:3.30.420.470 3 104 4.4E-12 T 12-10-2018 M892_27410 c1c2e4ce924a42760fbd0e977ca84c61 193 Gene3D G3DSA:3.20.20.300 54 190 3.7E-14 T 12-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 M892_27410 c1c2e4ce924a42760fbd0e977ca84c61 193 SUPERFAMILY SSF51445 58 174 2.63E-11 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily M892_27030 a95c531abe46b18d312ce5e287cbbf07 317 Pfam PF01551 Peptidase family M23 169 264 3.1E-31 T 12-10-2018 IPR016047 Peptidase M23 M892_27030 a95c531abe46b18d312ce5e287cbbf07 317 Gene3D G3DSA:2.70.70.10 144 265 4.0E-44 T 12-10-2018 IPR011055 Duplicated hybrid motif M892_27030 a95c531abe46b18d312ce5e287cbbf07 317 SUPERFAMILY SSF51261 38 267 3.19E-55 T 12-10-2018 IPR011055 Duplicated hybrid motif M892_09880 46e82e652987ce805a4f799a525dc83a 184 Pfam PF13521 AAA domain 4 164 6.8E-39 T 12-10-2018 IPR038727 NadR/Ttd14, AAA domain M892_09880 46e82e652987ce805a4f799a525dc83a 184 Gene3D G3DSA:3.40.50.300 2 169 3.7E-7 T 12-10-2018 M892_09880 46e82e652987ce805a4f799a525dc83a 184 SUPERFAMILY SSF52540 4 172 6.34E-18 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_22420 d722a21cf5a6112e794991317bd5d17b 582 Pfam PF05947 Type VI secretion system, TssF 5 580 9.0E-187 T 12-10-2018 IPR010272 Type VI secretion system, TssF-like M892_22420 d722a21cf5a6112e794991317bd5d17b 582 PIRSF PIRSF028304 2 582 8.6E-207 T 12-10-2018 IPR010272 Type VI secretion system, TssF-like M892_22420 d722a21cf5a6112e794991317bd5d17b 582 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 4 582 3.5E-201 T 12-10-2018 IPR010272 Type VI secretion system, TssF-like M892_16525 a214ea1623d15d26b6419baf4f3c58b8 571 Pfam PF11924 Inverse autotransporter, beta-domain 35 197 2.0E-34 T 12-10-2018 IPR024519 Inverse autotransporter, beta-domain M892_16525 a214ea1623d15d26b6419baf4f3c58b8 571 Gene3D G3DSA:2.40.160.160 8 234 1.7E-51 T 12-10-2018 IPR038177 Inverse autotransporter, beta-domain superfamily M892_23520 26c7bbd209391cfab4e89f025c5742e9 254 SUPERFAMILY SSF52540 184 219 7.09E-6 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_20560 98d11f8a8234b502a82b4cf832b12128 454 Pfam PF07670 Nucleoside recognition 140 233 2.1E-7 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 M892_15420 dca95515ca89577a0b36445ef322b03f 161 Gene3D G3DSA:1.10.8.640 20 104 1.7E-35 T 12-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily M892_15420 dca95515ca89577a0b36445ef322b03f 161 Pfam PF03918 Cytochrome C biogenesis protein 9 152 2.9E-54 T 12-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family M892_28675 405c03b43d7d9cda3d2b1b1103b52642 490 Pfam PF13655 N-terminal domain of reverse transcriptase 16 97 9.9E-32 T 12-10-2018 IPR025960 Reverse transcriptase, N-terminal domain M892_28675 405c03b43d7d9cda3d2b1b1103b52642 490 SUPERFAMILY SSF56672 89 406 1.67E-49 T 12-10-2018 M892_28675 405c03b43d7d9cda3d2b1b1103b52642 490 Pfam PF08388 Group II intron, maturase-specific domain 341 416 1.4E-23 T 12-10-2018 IPR013597 Group II intron, maturase-specific M892_28675 405c03b43d7d9cda3d2b1b1103b52642 490 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 60 403 1.9E-109 T 12-10-2018 IPR030931 Group II intron reverse transcriptase/maturase M892_28675 405c03b43d7d9cda3d2b1b1103b52642 490 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 112 321 1.9E-41 T 12-10-2018 IPR000477 Reverse transcriptase domain M892_11135 0ef1702b1ecaa25ec90a9100a84cb1bf 38 Pfam PF13627 Prokaryotic lipoprotein-attachment site 6 28 8.1E-9 T 12-10-2018 IPR032831 Prokaryotic lipoprotein-attachment site M892_23470 b2d956b8cafc2959c29dea984bb5f486 150 SUPERFAMILY SSF55811 9 136 1.15E-23 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 M892_23470 b2d956b8cafc2959c29dea984bb5f486 150 Gene3D G3DSA:3.90.79.10 5 139 2.0E-24 T 12-10-2018 M892_23470 b2d956b8cafc2959c29dea984bb5f486 150 Pfam PF00293 NUDIX domain 12 123 6.6E-21 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 M892_23460 3c1c2349b3ffe5786c4ef0417986d6a1 136 Pfam PF13673 Acetyltransferase (GNAT) domain 35 135 9.3E-19 T 12-10-2018 IPR000182 GNAT domain M892_23460 3c1c2349b3ffe5786c4ef0417986d6a1 136 SUPERFAMILY SSF55729 10 123 7.74E-24 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_23460 3c1c2349b3ffe5786c4ef0417986d6a1 136 Gene3D G3DSA:3.40.630.30 2 136 4.0E-35 T 12-10-2018 M892_03320 30b33765e6ed968d82fc2a1444ca9118 345 Pfam PF03864 Phage major capsid protein E 5 342 3.8E-46 T 12-10-2018 IPR005564 Major capsid protein GpE M892_03320 30b33765e6ed968d82fc2a1444ca9118 345 Gene3D G3DSA:3.30.1930.10 158 283 5.5E-93 T 12-10-2018 M892_03320 30b33765e6ed968d82fc2a1444ca9118 345 Gene3D G3DSA:3.15.30.10 29 333 5.5E-93 T 12-10-2018 M892_01785 53ea8a65a7ec93dcd8fae0e572324727 461 Pfam PF05707 Zonular occludens toxin (Zot) 2 255 6.7E-76 T 12-10-2018 IPR008900 Zona occludens toxin M892_01180 7d3c8026436da9f7a4efa4bfc080e74d 111 Gene3D G3DSA:1.10.760.10 1 107 8.5E-39 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M892_01180 7d3c8026436da9f7a4efa4bfc080e74d 111 SUPERFAMILY SSF46626 14 109 2.39E-24 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M892_10765 b45885f3f03f17f0933238d5200eb6a4 481 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 85 464 3.9E-116 T 12-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 M892_10765 b45885f3f03f17f0933238d5200eb6a4 481 PIRSF PIRSF006247 1 481 1.9E-167 T 12-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 M892_10765 b45885f3f03f17f0933238d5200eb6a4 481 Pfam PF02386 Cation transport protein 51 475 1.5E-49 T 12-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 M892_03355 76a39d1f52981a030c1765759de92691 160 Pfam PF03245 Bacteriophage Rz lysis protein 36 155 8.1E-29 T 12-10-2018 IPR004929 Spanin, inner membrane subunit GO:0019076|GO:0019835 M892_06720 28fa7b71c2f67787aeafb2b7606e2ed1 193 SMART SM00463 92 175 4.5E-13 T 12-10-2018 IPR002625 Smr domain M892_06720 28fa7b71c2f67787aeafb2b7606e2ed1 193 SUPERFAMILY SSF160443 93 175 1.83E-13 T 12-10-2018 IPR036063 Smr domain superfamily M892_06720 28fa7b71c2f67787aeafb2b7606e2ed1 193 Gene3D G3DSA:3.30.1370.110 48 181 1.1E-42 T 12-10-2018 M892_06720 28fa7b71c2f67787aeafb2b7606e2ed1 193 Pfam PF01713 Smr domain 95 175 4.0E-20 T 12-10-2018 IPR002625 Smr domain M892_13275 09f6b8e7d93579e6ae52d41f84a6b5ad 265 Pfam PF09955 Predicted integral membrane protein (DUF2189) 82 195 3.1E-27 T 12-10-2018 IPR018692 Predicted integral membrane protein DUF2189 M892_05515 fb3d37b5a3e90f408035a6514b5848e1 473 SUPERFAMILY SSF48452 76 266 1.69E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_02630 a47fc1b2582ba83e7303039eb2d4c270 138 Pfam PF07007 Lysozyme inhibitor LprI 25 116 7.6E-15 T 12-10-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal M892_02630 a47fc1b2582ba83e7303039eb2d4c270 138 Gene3D G3DSA:1.20.1270.180 17 128 3.9E-13 T 12-10-2018 M892_26115 2b5a76a4ce39e71ede22b166e7fe702e 606 Pfam PF05840 Bacteriophage replication gene A protein (GPA) 157 413 1.8E-70 T 12-10-2018 IPR008766 Replication gene A protein GO:0006260 M892_18325 43c9f722976c112216ff8dbc3f415a3c 166 Gene3D G3DSA:3.40.630.30 1 162 2.4E-31 T 12-10-2018 M892_18325 43c9f722976c112216ff8dbc3f415a3c 166 Pfam PF00583 Acetyltransferase (GNAT) family 48 139 7.7E-17 T 12-10-2018 IPR000182 GNAT domain M892_18325 43c9f722976c112216ff8dbc3f415a3c 166 SUPERFAMILY SSF55729 1 162 6.58E-31 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_19535 0bb2d5e224bdb9d169513e6ebfee00eb 413 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 100 149 4.4E-13 T 12-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain M892_19535 0bb2d5e224bdb9d169513e6ebfee00eb 413 Pfam PF01610 Transposase 165 404 2.9E-65 T 12-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain M892_01150 69da96ae7da24da4ba871b52bf49d33f 554 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 45 540 1.3E-169 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 M892_01150 69da96ae7da24da4ba871b52bf49d33f 554 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 84 540 4.6E-135 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 M892_27675 d39998858541e9640ae82107bf1660ed 109 Pfam PF01380 SIS domain 3 83 8.9E-11 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 M892_27675 d39998858541e9640ae82107bf1660ed 109 Gene3D G3DSA:3.40.50.10490 1 104 1.6E-22 T 12-10-2018 M892_27675 d39998858541e9640ae82107bf1660ed 109 SUPERFAMILY SSF53697 3 104 1.11E-21 T 12-10-2018 M892_22610 bb1465964434253763bd24506527b263 69 SUPERFAMILY SSF50182 18 68 3.27E-15 T 12-10-2018 IPR010920 LSM domain superfamily M892_22610 bb1465964434253763bd24506527b263 69 Pfam PF06004 Bacterial protein of unknown function (DUF903) 20 68 1.4E-17 T 12-10-2018 IPR010305 Protein of unknown function DUF903 M892_22610 bb1465964434253763bd24506527b263 69 Gene3D G3DSA:2.30.30.100 17 69 3.7E-19 T 12-10-2018 M892_14360 bcbe23a8b799a05f8fd4369bbda8e858 187 Pfam PF00482 Type II secretion system (T2SS), protein F 44 171 1.5E-14 T 12-10-2018 IPR018076 Type II secretion system F domain M892_06320 703b7ece8e45044a2de0a1adfe84bb48 167 Pfam PF14539 Domain of unknown function (DUF4442) 17 151 4.0E-24 T 12-10-2018 IPR027961 Protein of unknown function DUF4442 M892_06320 703b7ece8e45044a2de0a1adfe84bb48 167 SUPERFAMILY SSF54637 10 156 7.46E-24 T 12-10-2018 IPR029069 HotDog domain superfamily M892_06320 703b7ece8e45044a2de0a1adfe84bb48 167 Gene3D G3DSA:3.10.129.10 15 157 9.6E-28 T 12-10-2018 M892_06195 ee19cb3417e61541c4746d29bafed4a0 173 Pfam PF03350 Uncharacterized protein family, UPF0114 8 132 1.1E-21 T 12-10-2018 IPR005134 Uncharacterised protein family UPF0114 M892_08855 a6bbb80a21d814991ef40176c0a39f77 266 Pfam PF06738 Putative threonine/serine exporter 21 258 3.4E-67 T 12-10-2018 IPR010619 Putative threonine/serine exporter M892_22470 3e8ee3b64de30ca02b13a2cd7f259f72 306 Pfam PF13737 Transposase DDE domain 19 129 6.8E-45 T 12-10-2018 IPR025668 Transposase DDE domain M892_00830 4950e5fdf33c4e1dfd471af5557ccb23 228 Pfam PF03352 Methyladenine glycosylase 42 137 8.9E-16 T 12-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 M892_00830 4950e5fdf33c4e1dfd471af5557ccb23 228 SUPERFAMILY SSF48150 39 184 1.21E-40 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 M892_00830 4950e5fdf33c4e1dfd471af5557ccb23 228 Gene3D G3DSA:1.10.340.30 37 164 4.6E-19 T 12-10-2018 M892_04985 3caf82be940970e8f5e366b1f3399018 57 Pfam PF13817 IS66 C-terminal element 19 53 3.2E-8 T 12-10-2018 IPR039552 Transposase IS66, C-terminal M892_07145 3b962c89798458462ef401e846ac4483 154 SUPERFAMILY SSF53271 5 146 2.41E-27 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like M892_07145 3b962c89798458462ef401e846ac4483 154 Pfam PF00156 Phosphoribosyl transferase domain 28 145 6.3E-14 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 M892_07145 3b962c89798458462ef401e846ac4483 154 Gene3D G3DSA:3.40.50.2020 1 152 4.4E-41 T 12-10-2018 M892_07145 3b962c89798458462ef401e846ac4483 154 Hamap MF_01903 Xanthine phosphoribosyltransferase [gpt]. 1 153 37.612 T 12-10-2018 IPR023747 Xanthine-guanine phosphoribosyltransferase GO:0000310 KEGG: 00230+2.4.2.22 M892_24015 083aff71e58801638dc20a627428d97f 103 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 9 101 1.1E-34 T 12-10-2018 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 M892_24015 083aff71e58801638dc20a627428d97f 103 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 13 87 2.5E-15 T 12-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 M892_18010 d5bf4bd53a26ca90ca3cbea15114737a 170 SUPERFAMILY SSF56524 44 166 5.23E-14 T 12-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 M892_17095 6c875f969cba18beac4510b1bc7d268d 41 ProDom PD926058 BIOSYNTHESIS PEPTIDE LEADER AROMATIC VC1176 VV1222 OPERON ACID AMINO AMINO-ACID 1 41 1.0E-5 T 12-10-2018 IPR012639 Tryptophan operon leader peptide M892_17095 6c875f969cba18beac4510b1bc7d268d 41 Pfam PF08056 Tryptophan operon leader peptide 1 41 3.1E-29 T 12-10-2018 IPR012639 Tryptophan operon leader peptide M892_24545 e21a8c5ebd07a70b7e0e2497e3d25e36 165 Pfam PF01810 LysE type translocator 3 164 2.7E-20 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 M892_16820 01e8aecb7c6663f489248cf7d73cb8a2 159 Pfam PF02371 Transposase IS116/IS110/IS902 family 33 117 3.5E-20 T 12-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 M892_20500 94d8056ab28faf483599afa76bc21095 194 Pfam PF08388 Group II intron, maturase-specific domain 52 120 7.0E-15 T 12-10-2018 IPR013597 Group II intron, maturase-specific M892_12755 d75a12997adb8b98f21048845d7e626a 191 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 27 1.3E-5 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M892_12755 d75a12997adb8b98f21048845d7e626a 191 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 27 4.3E-4 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M892_01050 5c0a14cd31f0e93797b17e71c728fba2 242 PIRSF PIRSF006324 31 241 2.9E-57 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 M892_01050 5c0a14cd31f0e93797b17e71c728fba2 242 Pfam PF01810 LysE type translocator 46 239 5.4E-32 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 M892_00255 069f892434293701cc5acb7cfb692bd4 220 Pfam PF11140 Protein of unknown function (DUF2913) 3 214 3.6E-84 T 12-10-2018 IPR021316 Protein of unknown function DUF2913 M892_02845 0d4d29d059f5b5840907b2692091d269 104 Pfam PF01906 Putative heavy-metal-binding 1 103 2.6E-39 T 12-10-2018 IPR002765 Uncharacterised protein family UPF0145 M892_02845 0d4d29d059f5b5840907b2692091d269 104 Gene3D G3DSA:3.30.110.70 1 104 6.8E-33 T 12-10-2018 M892_02845 0d4d29d059f5b5840907b2692091d269 104 SUPERFAMILY SSF117782 1 103 1.44E-37 T 12-10-2018 IPR035439 UPF0145 domain superfamily M892_02845 0d4d29d059f5b5840907b2692091d269 104 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 103 26.269 T 12-10-2018 IPR002765 Uncharacterised protein family UPF0145 M892_06150 763e373f6f26e01bfcc717b89691f3a0 185 PIRSF PIRSF004982 2 185 6.9E-61 T 12-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 M892_06150 763e373f6f26e01bfcc717b89691f3a0 185 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 9 155 2.4E-36 T 12-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 M892_06150 763e373f6f26e01bfcc717b89691f3a0 185 Pfam PF03843 Outer membrane lipoprotein Slp family 17 164 3.9E-45 T 12-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 M892_02610 7b7f6f1d4fe51669ec1cc883a55fb558 289 Gene3D G3DSA:3.40.190.290 90 289 3.4E-47 T 12-10-2018 M892_02610 7b7f6f1d4fe51669ec1cc883a55fb558 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 8.3E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_02610 7b7f6f1d4fe51669ec1cc883a55fb558 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 8.3E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_02610 7b7f6f1d4fe51669ec1cc883a55fb558 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 8.3E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_02610 7b7f6f1d4fe51669ec1cc883a55fb558 289 SUPERFAMILY SSF46785 2 109 3.86E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_02610 7b7f6f1d4fe51669ec1cc883a55fb558 289 SUPERFAMILY SSF53850 90 288 7.85E-42 T 12-10-2018 M892_02610 7b7f6f1d4fe51669ec1cc883a55fb558 289 Gene3D G3DSA:1.10.10.10 1 83 5.6E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_02610 7b7f6f1d4fe51669ec1cc883a55fb558 289 Pfam PF03466 LysR substrate binding domain 89 287 8.0E-44 T 12-10-2018 IPR005119 LysR, substrate-binding M892_02610 7b7f6f1d4fe51669ec1cc883a55fb558 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 4.0E-20 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M892_20965 2ffedb243574745c61c91aa3485c36b7 394 Pfam PF06527 TniQ 5 157 6.4E-18 T 12-10-2018 IPR009492 TniQ M892_23440 e6bdffd1ed5a83f59a8d084fefb45d1c 615 Pfam PF01757 Acyltransferase family 5 321 8.0E-29 T 12-10-2018 IPR002656 Acyltransferase 3 GO:0016747 M892_04450 59192288ce5150afd1775f8606c6c756 123 Pfam PF13453 Transcription factor zinc-finger 2 39 1.5E-10 T 12-10-2018 IPR027392 Transcription factor zinc-finger M892_09295 bcc80979166921c87ca07504bf35cfa3 140 Pfam PF05656 Protein of unknown function (DUF805) 8 139 2.9E-20 T 12-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 M892_11235 d1efb875c6e69ac0b0b3fd52e0f8e146 337 Pfam PF01757 Acyltransferase family 7 326 6.5E-31 T 12-10-2018 IPR002656 Acyltransferase 3 GO:0016747 M892_00520 50a2e94b3d8af91fc79e059added5291 193 Pfam PF11140 Protein of unknown function (DUF2913) 8 181 6.5E-22 T 12-10-2018 IPR021316 Protein of unknown function DUF2913 M892_02245 aa42f7080a9f12aef86bcde33dc01748 475 SUPERFAMILY SSF57997 177 286 2.01E-5 T 12-10-2018 M892_18740 3d662f5bd516af8876f571a9548e4033 281 Pfam PF02517 CAAX protease self-immunity 179 268 1.1E-20 T 12-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 M892_05865 dabb8b89ed3c6b07cbfbb33b849f169a 301 Pfam PF03601 Conserved hypothetical protein 698 15 282 3.8E-55 T 12-10-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 M892_04095 18364073bdc036d3005f0d396235a0f1 241 Pfam PF00106 short chain dehydrogenase 5 183 1.2E-35 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_04095 18364073bdc036d3005f0d396235a0f1 241 Gene3D G3DSA:3.40.50.720 4 215 3.4E-46 T 12-10-2018 M892_04095 18364073bdc036d3005f0d396235a0f1 241 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 129 157 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 M892_04095 18364073bdc036d3005f0d396235a0f1 241 SUPERFAMILY SSF51735 5 236 2.55E-45 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M892_04095 18364073bdc036d3005f0d396235a0f1 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 8.8E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_04095 18364073bdc036d3005f0d396235a0f1 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 116 132 8.8E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_04095 18364073bdc036d3005f0d396235a0f1 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 142 161 8.8E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_04095 18364073bdc036d3005f0d396235a0f1 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 180 8.8E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M892_21800 3e5c58296ce530819c78bfafbae5f760 164 Pfam PF14317 YcxB-like protein 99 154 2.6E-7 T 12-10-2018 IPR025588 YcxB-like protein M892_15690 f26d06afd80b717e4e8aade29f0745aa 1461 Pfam PF13665 Domain of unknown function (DUF4150) 22 127 1.6E-33 T 12-10-2018 IPR025425 Domain of unknown function DUF4150 M892_21740 8bdee8c0b3e698827b804a6956d9c167 90 Gene3D G3DSA:1.20.58.1000 1 90 2.1E-30 T 12-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily M892_21740 8bdee8c0b3e698827b804a6956d9c167 90 Pfam PF02583 Metal-sensitive transcriptional repressor 7 86 6.4E-24 T 12-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 M892_06060 47a68837b5d1a603eede7519e6fa11b9 394 SUPERFAMILY SSF159501 80 191 1.43E-6 T 12-10-2018 M892_26295 74336671e7ad5712fbcac418abd0f8e2 146 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 8 143 3.0E-23 T 12-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 M892_26650 142f60fa88e6f688e74e29f875eddc1c 278 Pfam PF02698 DUF218 domain 6 131 4.8E-14 T 12-10-2018 IPR003848 Domain of unknown function DUF218 M892_19940 73cd7e91b7746a154a8f041ea2a7df11 380 SUPERFAMILY SSF56935 33 372 6.5E-21 T 12-10-2018 M892_19940 73cd7e91b7746a154a8f041ea2a7df11 380 Gene3D G3DSA:2.40.160.10 29 373 6.7E-9 T 12-10-2018 IPR023614 Porin domain superfamily M892_09280 5ced732cfc2e88d63db4e410a50e9f6f 204 Gene3D G3DSA:1.10.10.10 2 85 1.3E-9 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M892_09280 5ced732cfc2e88d63db4e410a50e9f6f 204 SUPERFAMILY SSF46785 5 183 1.4E-36 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M892_09280 5ced732cfc2e88d63db4e410a50e9f6f 204 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 46 5.4E-6 T 12-10-2018 M892_17860 be44b2b31b7af828cbc5d7f7005f065c 517 Pfam PF13817 IS66 C-terminal element 477 513 7.6E-8 T 12-10-2018 IPR039552 Transposase IS66, C-terminal M892_17860 be44b2b31b7af828cbc5d7f7005f065c 517 Pfam PF13007 Transposase C of IS166 homeodomain 42 115 3.8E-14 T 12-10-2018 IPR024463 Transposase TnpC, homeodomain M892_17860 be44b2b31b7af828cbc5d7f7005f065c 517 Pfam PF13005 zinc-finger binding domain of transposase IS66 123 167 1.5E-16 T 12-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 M892_17860 be44b2b31b7af828cbc5d7f7005f065c 517 Pfam PF03050 Transposase IS66 family 187 470 3.8E-101 T 12-10-2018 IPR004291 Transposase, IS66 M892_23685 5ba883585bd1f4a325560c1701c2f27b 418 Pfam PF03222 Tryptophan/tyrosine permease family 31 408 6.8E-17 T 12-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 M892_25305 f5e443f03838d5fcb0c1d4e55095061b 435 Pfam PF01943 Polysaccharide biosynthesis protein 26 296 4.2E-8 T 12-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 M892_25305 f5e443f03838d5fcb0c1d4e55095061b 435 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 350 431 1.1E-6 T 12-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain M892_02375 bb221958062eb807f632480ae6bab4e9 363 Gene3D G3DSA:3.60.60.10 22 359 1.2E-113 T 12-10-2018 M892_02375 bb221958062eb807f632480ae6bab4e9 363 SUPERFAMILY SSF56235 22 354 9.26E-95 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal M892_02375 bb221958062eb807f632480ae6bab4e9 363 Pfam PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family 22 346 3.5E-71 T 12-10-2018 IPR029132 Choloylglycine hydrolase/NAAA C-terminal M892_22950 63b336dc6d75348c5f8e357f4e295e5c 51 ProDom PD026807 UPF0181 YOAH YPTB1650 VV20310 VPA0916 VCA0569 YPO1774/Y2534/YP1619 PLU2693 VVA0806 PM0480 1 48 4.0E-18 T 12-10-2018 IPR005371 Uncharacterised protein family UPF0181 M892_22950 63b336dc6d75348c5f8e357f4e295e5c 51 Pfam PF03701 Uncharacterised protein family (UPF0181) 1 49 1.5E-25 T 12-10-2018 IPR005371 Uncharacterised protein family UPF0181 M892_24160 cc25970e2afec3fad1840ae72a23e310 510 Pfam PF13817 IS66 C-terminal element 470 506 7.5E-8 T 12-10-2018 IPR039552 Transposase IS66, C-terminal M892_24160 cc25970e2afec3fad1840ae72a23e310 510 Pfam PF13007 Transposase C of IS166 homeodomain 38 108 1.3E-14 T 12-10-2018 IPR024463 Transposase TnpC, homeodomain M892_24160 cc25970e2afec3fad1840ae72a23e310 510 Pfam PF13005 zinc-finger binding domain of transposase IS66 116 160 1.6E-16 T 12-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 M892_24160 cc25970e2afec3fad1840ae72a23e310 510 Pfam PF03050 Transposase IS66 family 180 463 4.7E-101 T 12-10-2018 IPR004291 Transposase, IS66 M892_02625 92de10ed6c25b06eceeb37c5acf5e16e 203 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 31 94 2.7E-7 T 12-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 M892_26055 03f36ba4a6bc256540104d3886a97c8e 139 Pfam PF05926 Phage head completion protein (GPL) 74 135 9.8E-12 T 12-10-2018 IPR009225 Bacteriophage head completion protein GpL GO:0019069 M892_04370 122bc0571055daeb99926cd11fe53c98 463 Pfam PF03606 C4-dicarboxylate anaerobic carrier 19 459 5.8E-80 T 12-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 M892_19200 96dd691a5d2b7f98b36c27827b325af0 147 Pfam PF06271 RDD family 6 141 1.3E-16 T 12-10-2018 IPR010432 RDD M892_23120 333db0563f3b2f2e43d4279c38ccd73c 210 Pfam PF11736 Protein of unknown function (DUF3299) 24 206 1.1E-31 T 12-10-2018 IPR021727 Protein of unknown function DUF3299 M892_23120 333db0563f3b2f2e43d4279c38ccd73c 210 Gene3D G3DSA:2.40.50.870 63 210 4.9E-34 T 12-10-2018 M892_15600 2ac20cf3aadce379a5f1d7c3595fff63 115 PIRSF PIRSF016789 1 110 3.9E-39 T 12-10-2018 IPR007401 Protein of unknown function DUF454 M892_15600 2ac20cf3aadce379a5f1d7c3595fff63 115 Pfam PF04304 Protein of unknown function (DUF454) 1 103 3.8E-35 T 12-10-2018 IPR007401 Protein of unknown function DUF454 M892_13220 b512a2383a7cc3dcf1820e7357a65fa1 182 Pfam PF02325 YGGT family 7 74 1.5E-19 T 12-10-2018 IPR003425 CCB3/YggT GO:0016020 M892_13220 b512a2383a7cc3dcf1820e7357a65fa1 182 Pfam PF02325 YGGT family 106 170 9.4E-20 T 12-10-2018 IPR003425 CCB3/YggT GO:0016020 M892_19895 32788edb856417e6452033219c9f1508 144 Pfam PF14352 Domain of unknown function (DUF4402) 52 143 2.0E-6 T 12-10-2018 IPR025514 Protein of unknown function DUF4402 M892_25705 e001686968813962d0d07f8451556f30 279 Pfam PF02361 Cobalt transport protein 17 236 2.0E-30 T 12-10-2018 IPR003339 ABC/ECF transporter, transmembrane component M892_14680 7e3f597fd58c8ea7788621e7cfdbb752 452 Pfam PF14344 Domain of unknown function (DUF4397) 31 153 4.9E-18 T 12-10-2018 IPR025510 Domain of unknown function DUF4397 M892_14680 7e3f597fd58c8ea7788621e7cfdbb752 452 Pfam PF14344 Domain of unknown function (DUF4397) 138 232 5.0E-12 T 12-10-2018 IPR025510 Domain of unknown function DUF4397 M892_14680 7e3f597fd58c8ea7788621e7cfdbb752 452 Pfam PF14344 Domain of unknown function (DUF4397) 247 369 3.9E-16 T 12-10-2018 IPR025510 Domain of unknown function DUF4397 M892_19880 c699786c623e3d8ac099bda1f011ed95 737 SUPERFAMILY SSF49464 595 677 1.41E-6 T 12-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily M892_23135 58e4b3577337db9636ab050130b282bc 110 Pfam PF07394 Protein of unknown function (DUF1501) 36 101 3.1E-7 T 12-10-2018 IPR010869 Protein of unknown function DUF1501 M892_23135 58e4b3577337db9636ab050130b282bc 110 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 32 1.4E-5 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal M892_23135 58e4b3577337db9636ab050130b282bc 110 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 2 24 3.3E-5 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal M892_28555 7770da3a9fe9611ab8514f28f9ac8bd9 132 Pfam PF01541 GIY-YIG catalytic domain 34 79 8.6E-5 T 12-10-2018 IPR000305 GIY-YIG endonuclease M892_28555 7770da3a9fe9611ab8514f28f9ac8bd9 132 Gene3D G3DSA:3.40.1440.10 31 95 2.5E-8 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 M892_07410 ac40eca4c3734bb0d6b59a34e93aa2b5 455 Pfam PF03553 Na+/H+ antiporter family 25 223 6.5E-13 T 12-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 M892_25995 1d18947400c28d4d0571a89d515f48a7 110 Pfam PF10761 Protein of unknown function (DUF2590) 8 104 1.5E-39 T 12-10-2018 IPR019697 Bacteriophage HP1, Orf28 M892_05380 c1d874fb5e4a0852c43624b842dd261f 515 Pfam PF11840 Protein of unknown function (DUF3360) 11 514 8.5E-264 T 12-10-2018 IPR021794 Protein of unknown function DUF3360 M892_24215 6cece6cb8c3f33e2a098d5a55bfd7229 328 Gene3D G3DSA:3.40.50.300 2 197 1.9E-45 T 12-10-2018 M892_24215 6cece6cb8c3f33e2a098d5a55bfd7229 328 SUPERFAMILY SSF52540 5 171 4.18E-26 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M892_24215 6cece6cb8c3f33e2a098d5a55bfd7229 328 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 177 3.9E-42 T 12-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain M892_24215 6cece6cb8c3f33e2a098d5a55bfd7229 328 SMART SM00833 241 324 0.0087 T 12-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal M892_11190 73819e10d5ad4b40aecd656d989e1ac0 329 Gene3D G3DSA:3.40.50.1820 28 329 2.3E-52 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_11190 73819e10d5ad4b40aecd656d989e1ac0 329 Pfam PF12146 Serine aminopeptidase, S33 53 310 2.9E-58 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 M892_11190 73819e10d5ad4b40aecd656d989e1ac0 329 SUPERFAMILY SSF53474 42 317 5.45E-46 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_06965 293184ecca3f95f0654b665756541a35 396 Pfam PF07907 YibE/F-like protein 130 368 1.8E-72 T 12-10-2018 IPR012507 YibE/F-like M892_23960 aa022ad3467e94b34ea6088464bc2ebc 244 Pfam PF13817 IS66 C-terminal element 204 240 2.7E-8 T 12-10-2018 IPR039552 Transposase IS66, C-terminal M892_23960 aa022ad3467e94b34ea6088464bc2ebc 244 Pfam PF03050 Transposase IS66 family 1 197 5.6E-67 T 12-10-2018 IPR004291 Transposase, IS66 M892_27055 46f000fbb091acc02a100b9aace01696 128 Pfam PF10807 Protein of unknown function (DUF2541) 7 115 6.4E-9 T 12-10-2018 IPR020240 Uncharacterised protein family UPF0412, YaaI M892_02895 cbeba5f8c68746730d025015f871bcc8 329 Pfam PF11383 Protein of unknown function (DUF3187) 9 323 5.8E-119 T 12-10-2018 IPR021523 Protein of unknown function DUF3187 M892_19075 f94ea9677856f3d517f9f8eb9d771261 354 Pfam PF13265 Protein of unknown function (DUF4056) 19 280 3.7E-110 T 12-10-2018 IPR025130 Protein of unknown function DUF4056 M892_27180 ee9e5e8e83ea6e862dea54c70b87b81b 88 Pfam PF11212 Protein of unknown function (DUF2999) 1 82 4.7E-46 T 12-10-2018 IPR021376 Protein of unknown function DUF2999 M892_02000 859a2877350a3d8316df5bba10e45974 150 Pfam PF11749 Protein of unknown function (DUF3305) 54 140 2.1E-19 T 12-10-2018 IPR021736 Protein of unknown function DUF3305 M892_22990 b84a13a6af8a747338a88bf7f328f52b 122 Pfam PF10719 Late competence development protein ComFB 8 85 1.4E-16 T 12-10-2018 IPR019657 Late competence development protein ComFB M892_16875 16acafbbc72ef81b31f4f0d1290e3fff 1409 Pfam PF01476 LysM domain 266 299 4.6E-4 T 12-10-2018 IPR018392 LysM domain M892_16875 16acafbbc72ef81b31f4f0d1290e3fff 1409 Gene3D G3DSA:3.10.350.10 260 303 5.7E-5 T 12-10-2018 IPR036779 LysM domain superfamily M892_03125 9af004e17609e1919d1b39832118cfbc 315 Pfam PF10977 Protein of unknown function (DUF2797) 75 307 1.2E-95 T 12-10-2018 IPR021246 Protein of unknown function DUF2797 M892_13345 0917a48fca7c5f102df356fc064f4449 102 SUPERFAMILY SSF102829 6 95 6.15E-24 T 12-10-2018 IPR036192 Cell division protein ZapA-like superfamily M892_13345 0917a48fca7c5f102df356fc064f4449 102 Gene3D G3DSA:1.10.20.30 1 47 8.3E-19 T 12-10-2018 M892_13345 0917a48fca7c5f102df356fc064f4449 102 Pfam PF05164 Cell division protein ZapA 6 89 4.9E-19 T 12-10-2018 IPR007838 Cell division protein ZapA-like M892_00640 68828462013806a71803f491be94b9e5 122 Gene3D G3DSA:1.10.10.60 77 121 5.1E-6 T 12-10-2018 M892_08310 72b8d824dd5720c0a8b662376b91684a 259 Pfam PF01925 Sulfite exporter TauE/SafE 11 246 2.8E-41 T 12-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 M892_04460 c97709a1083cae3d8c86b62b38be8d9f 399 Pfam PF04888 Secretion system effector C (SseC) like family 116 394 8.7E-48 T 12-10-2018 IPR006972 Secretion system effector C, SseC-like GO:0009405 M892_22640 e1487b41ba9d2d577b2345fe5a208f3f 77 Pfam PF11869 Protein of unknown function (DUF3389) 1 76 1.2E-33 T 12-10-2018 IPR021811 Protein of unknown function DUF3389 M892_01870 6b2972e2f54ee95103c23929391c0c66 158 Pfam PF05751 FixH 7 147 6.7E-44 T 12-10-2018 IPR008620 Nitrogen fixation protein FixH M892_25760 9265954cd980eafdf1cac428558d7773 165 SUPERFAMILY SSF48452 4 94 1.09E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M892_28380 02405cba8eb59ebde64cc33506c43060 219 Pfam PF01548 Transposase 9 157 1.4E-13 T 12-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 M892_03245 b3ba382220fdb3528db8beedeed29771 197 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 19 92 1.1E-5 T 12-10-2018 IPR019289 Bacteriophage tail protein Gp41, putative M892_03245 b3ba382220fdb3528db8beedeed29771 197 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 111 186 1.3E-8 T 12-10-2018 IPR019289 Bacteriophage tail protein Gp41, putative M892_24195 bd6c95453e036bd896161a6ece95dc29 279 Gene3D G3DSA:3.40.800.10 39 249 4.7E-8 T 12-10-2018 M892_24195 bd6c95453e036bd896161a6ece95dc29 279 SUPERFAMILY SSF52768 32 250 5.76E-22 T 12-10-2018 IPR023696 Ureohydrolase domain superfamily M892_00600 9ad1011bc1070f912c4dce38460a65f9 147 Pfam PF02371 Transposase IS116/IS110/IS902 family 26 106 4.1E-23 T 12-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 M892_04520 fa426e8503eb45afe4be00981b76f295 153 Pfam PF07321 Type III secretion protein YscO 2 149 4.4E-35 T 12-10-2018 IPR009929 Type III secretion sytem,YscO M892_08290 6e44d5738a6597307d3b8120657bc5f8 317 Pfam PF03186 CobD/Cbib protein 19 285 1.3E-29 T 12-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 M892_21070 7825146090ffc2a730c231879a732a1b 515 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 16 60 9.1E-7 T 12-10-2018 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal M892_26495 949a8105b67478db05b26d44b316a8a3 180 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 27 157 1.2E-27 T 12-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ M892_15110 96001609ed7204416e0c9f9254fef20e 356 Pfam PF01594 AI-2E family transporter 20 345 1.7E-74 T 12-10-2018 IPR002549 Transmembrane protein TqsA-like M892_14500 439cbd9b926ab45af66a45fdf0e34d85 183 SUPERFAMILY SSF110857 1 124 9.94E-17 T 12-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily M892_14500 439cbd9b926ab45af66a45fdf0e34d85 183 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 3 108 2.4E-9 T 12-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like M892_14500 439cbd9b926ab45af66a45fdf0e34d85 183 Gene3D G3DSA:3.10.490.10 1 120 2.0E-9 T 12-10-2018 M892_04770 801cd515891ae4734c5e291ba263e8c2 162 Gene3D G3DSA:2.30.30.890 36 159 3.2E-24 T 12-10-2018 M892_04770 801cd515891ae4734c5e291ba263e8c2 162 Pfam PF13958 Toxin ToxN, type III toxin-antitoxin system 52 150 6.7E-18 T 12-10-2018 IPR025911 ToxN/AbiQ toxin GO:0003723|GO:0004521 M892_23070 e92633dda15129655d2bae492651082e 461 PIRSF PIRSF006603 2 458 6.6E-71 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M892_23070 e92633dda15129655d2bae492651082e 461 Pfam PF01554 MatE 249 411 5.2E-16 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M892_23070 e92633dda15129655d2bae492651082e 461 Pfam PF01554 MatE 22 181 5.0E-35 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M892_23070 e92633dda15129655d2bae492651082e 461 TIGRFAM TIGR00797 matE: MATE efflux family protein 22 420 5.6E-56 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M892_24785 b890d26f5192b6eab19d6f5e8cbe3349 205 Pfam PF07819 PGAP1-like protein 51 134 1.2E-5 T 12-10-2018 IPR012908 GPI inositol-deacylase PGAP1-like GO:0016788 Reactome: R-HSA-162791 M892_24785 b890d26f5192b6eab19d6f5e8cbe3349 205 SUPERFAMILY SSF53474 3 178 1.12E-15 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M892_15910 8143e3f97b74cc5b5cf2a57a1b9c4470 478 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 7 457 7.4E-162 T 12-10-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 M892_15910 8143e3f97b74cc5b5cf2a57a1b9c4470 478 Pfam PF03553 Na+/H+ antiporter family 161 453 1.3E-65 T 12-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 M892_13195 fd11ed932c21f63f81087c7eea14b7f9 172 SUPERFAMILY SSF53098 8 169 1.06E-13 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_23300 27ee9ac1fbd911587febc94876680cb3 108 SUPERFAMILY SSF46626 21 102 9.89E-19 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M892_23300 27ee9ac1fbd911587febc94876680cb3 108 Gene3D G3DSA:1.10.760.10 21 104 3.0E-21 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M892_23300 27ee9ac1fbd911587febc94876680cb3 108 Pfam PF00034 Cytochrome c 33 98 3.2E-6 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M892_25535 f25b574db916079f25e94b9a65f833fa 158 Pfam PF14316 Domain of unknown function (DUF4381) 9 145 4.0E-36 T 12-10-2018 IPR025489 Protein of unknown function (DUF4381 M892_18755 85cd7aeddad7a4c24ff8da127d03983f 133 Pfam PF16357 Putative PepSY_TM-like 3 133 3.6E-43 T 12-10-2018 IPR032307 Putative PepSY TM-like protein M892_01335 c50a8bdd98cc8a87da1c3344761bdcc0 508 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 18 444 2.9E-141 T 12-10-2018 IPR002823 Protein of unknown function DUF112, transmembrane M892_26570 d6063b702a35bd57d262f1705315f319 182 Pfam PF10135 Rod binding protein 63 104 7.8E-10 T 12-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal M892_14230 7980f27aa6bef9fdcb2f30a0460f8bb8 201 Pfam PF10144 Bacterial virulence factor haemolysin 12 151 3.9E-38 T 12-10-2018 IPR019305 Uncharacterised protein family Smp M892_15445 abdd3ed80bd25c358e26466ca5b58f76 244 Pfam PF11859 Protein of unknown function (DUF3379) 1 241 3.7E-82 T 12-10-2018 IPR021806 Protein of unknown function DUF3379 M892_02825 850fdcbdd58c855f33bc8834b313bd2f 46 Gene3D G3DSA:3.40.50.850 1 41 3.3E-6 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 M892_06910 f02f2f42d01a00a0e6db898769a0cac8 339 Pfam PF02371 Transposase IS116/IS110/IS902 family 224 287 1.7E-12 T 12-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 M892_06910 f02f2f42d01a00a0e6db898769a0cac8 339 Pfam PF01548 Transposase 8 142 5.5E-15 T 12-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 M892_21860 5d5577c8697adb10df5c0b24d33930b6 128 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 8 86 1.4E-23 T 12-10-2018 IPR025161 Putative transposase IS4/IS5 family M892_25270 a3df6f1cf24d4209b923e905dc7c8989 408 Pfam PF10082 Putative beta-barrel porin 2 41 405 9.3E-26 T 12-10-2018 IPR018759 Putative beta-barrel porin 2 M892_25090 55c7f2006f4ccbfef05569abe888cb47 232 Pfam PF01618 MotA/TolQ/ExbB proton channel family 95 194 3.7E-22 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel M892_28665 c60544fc642c0f90366696a40517096c 172 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 7 118 6.2E-9 T 12-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase M892_20675 cbf45a11587369a42cc9e7ce7e934b6d 247 Pfam PF03591 AzlC protein 25 163 6.2E-35 T 12-10-2018 IPR011606 Branched-chain amino acid transport, permease M892_21195 5cae8945bf9c65277545c878c821b047 172 Gene3D G3DSA:3.30.160.670 13 171 3.8E-26 T 12-10-2018 M892_21195 5cae8945bf9c65277545c878c821b047 172 Pfam PF13590 Domain of unknown function (DUF4136) 20 169 2.0E-26 T 12-10-2018 IPR025411 Domain of unknown function DUF4136 M892_10490 579eaf4879374b854a0b52a491af2f88 184 Pfam PF01169 Uncharacterized protein family UPF0016 103 178 4.2E-20 T 12-10-2018 IPR001727 Gdt1 family M892_10490 579eaf4879374b854a0b52a491af2f88 184 Pfam PF01169 Uncharacterized protein family UPF0016 7 80 1.3E-20 T 12-10-2018 IPR001727 Gdt1 family M892_10760 e0f9eebdc65f48483794006152a49aaf 211 Pfam PF11355 Protein of unknown function (DUF3157) 3 210 1.9E-63 T 12-10-2018 IPR021501 Protein of unknown function DUF3157 M892_07250 ec0056eb505bd0734ba2fe77f04e518b 208 PIRSF PIRSF004525 1 208 6.5E-15 T 12-10-2018 IPR016419 Prepilin peptidase-dependent protein B, predicted M892_00235 d06a014a70beec4896aabf4df64567e5 142 Gene3D G3DSA:3.10.450.40 77 132 9.5E-6 T 12-10-2018 M892_07025 d9c4a89dfaa792c0e4861bb826375ff3 132 Pfam PF04241 Protein of unknown function (DUF423) 20 110 6.0E-29 T 12-10-2018 IPR006696 Protein of unknown function DUF423 M892_15675 b8a7132404f361d7c750a1664405e9df 383 SUPERFAMILY SSF56349 148 197 6.77E-6 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 M892_15675 b8a7132404f361d7c750a1664405e9df 383 Gene3D G3DSA:1.10.443.10 13 197 2.4E-6 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 M892_05800 bba64bff68da7ff11e125c18795308fd 144 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 34 134 6.7E-43 T 12-10-2018 IPR039366 YscW/ExsB M892_25310 b4869b7dfed699e19525d6f9855c0bdf 129 Pfam PF04892 VanZ like family 38 123 3.8E-8 T 12-10-2018 IPR006976 VanZ-like M892_21880 053ae7bcedf14592f8c5e41e535ba949 945 Pfam PF15976 CS1-pili formation C-terminal 762 851 5.1E-9 T 12-10-2018 IPR031917 Pilus assembly protein, C-terminal domain M892_21880 053ae7bcedf14592f8c5e41e535ba949 945 Pfam PF16967 E-set like domain 269 335 2.8E-6 T 12-10-2018 IPR032636 Pilus assembly protein, E-set like domain M892_13180 cf2a6f3eb30f738f96725d3930346495 342 SUPERFAMILY SSF53335 106 316 1.29E-22 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M892_13180 cf2a6f3eb30f738f96725d3930346495 342 Pfam PF01170 Putative RNA methylase family UPF0020 135 295 1.9E-13 T 12-10-2018 IPR000241 Putative RNA methylase domain M892_22700 280871c1d1918fddbe7a8d9f24f2a45c 818 Pfam PF02687 FtsX-like permease family 729 812 4.0E-6 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 M892_21505 ac0fb86aab855f94f1eef970eb39f538 117 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 8 86 1.4E-24 T 12-10-2018 IPR025161 Putative transposase IS4/IS5 family M892_21765 098cbc62c361343444b23e392460c83f 249 Pfam PF06629 MltA-interacting protein MipA 25 248 7.6E-37 T 12-10-2018 IPR010583 MltA-interacting MipA M892_24260 bc6aee04443497c3749cea27fe3e162b 56 Pfam PF11769 Protein of unknown function (DUF3313) 7 43 6.8E-5 T 12-10-2018 IPR021747 Protein of unknown function DUF3313 M892_03480 aa020eff5ca2200f20fbfa62329e44d2 272 Pfam PF10065 Uncharacterized conserved protein (DUF2303) 3 270 1.7E-64 T 12-10-2018 IPR019276 Protein of unkown function DUF2303 M892_14355 b4cdb8c6f2cace60de300378aaf92a53 301 Pfam PF00482 Type II secretion system (T2SS), protein F 133 257 1.5E-14 T 12-10-2018 IPR018076 Type II secretion system F domain M892_21510 e3eadb06ebfe52723fe5b94cfaca143c 133 Pfam PF01609 Transposase DDE domain 2 117 4.3E-12 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 M892_07235 a3d6d8c33b3335d8a6f8cee480927252 519 Pfam PF03806 AbgT putative transporter family 19 517 4.1E-211 T 12-10-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 M892_12255 9b51a4388b26cd07ec375cc77ab0430f 159 Pfam PF09523 Protein of unknown function (DUF2390) 15 115 1.1E-28 T 12-10-2018 IPR012659 Conserved hypothetical protein CHP02444 M892_12255 9b51a4388b26cd07ec375cc77ab0430f 159 TIGRFAM TIGR02444 TIGR02444: TIGR02444 family protein 13 119 1.2E-35 T 12-10-2018 IPR012659 Conserved hypothetical protein CHP02444 M892_04480 46bf4d1ee38d9ded7f61050d0e910d14 137 TIGRFAM TIGR02572 LcrR: type III secretion system regulator LcrR 4 137 7.9E-59 T 12-10-2018 IPR013405 Type III secretion system regulator, LcrR M892_04480 46bf4d1ee38d9ded7f61050d0e910d14 137 Pfam PF09621 Type III secretion system regulator (LcrR) 5 137 4.8E-57 T 12-10-2018 IPR022797 Type III secretion system regulator LcrR/Chaperone CesD2 M892_20980 637ad725bc58e36ca0350a02fd22b790 360 Gene3D G3DSA:2.130.10.10 96 342 8.3E-6 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 M892_20980 637ad725bc58e36ca0350a02fd22b790 360 SUPERFAMILY SSF82171 97 289 6.67E-11 T 12-10-2018 M892_06675 8babdc6cbea0757b75b8a6acb51d24ee 149 Pfam PF04214 Protein of unknown function, DUF 48 118 3.0E-29 T 12-10-2018 IPR007332 Protein of unknown function DUF411 M892_12465 98419244c270e535e58fdbe9ea64ff1b 191 Pfam PF05137 Fimbrial assembly protein (PilN) 103 177 1.7E-10 T 12-10-2018 IPR007813 Fimbrial assembly PilN M892_27915 69cfbac3b2d1130795f25a2b005b7998 83 Pfam PF11280 Protein of unknown function (DUF3081) 5 81 1.2E-29 T 12-10-2018 IPR021432 Protein of unknown function DUF3081 M892_02505 c6959ed73e3123c05dfe0bd11d186143 385 SUPERFAMILY SSF51905 2 136 5.56E-5 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M892_02505 c6959ed73e3123c05dfe0bd11d186143 385 Pfam PF05834 Lycopene cyclase protein 7 377 1.9E-38 T 12-10-2018 M892_18285 75e7d7cbbf909cca506421b1d9e5c6ca 249 SUPERFAMILY SSF46894 168 223 2.04E-5 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M892_15080 e695ee3e359fad39812011c7ca58923c 426 Pfam PF09839 Uncharacterized protein conserved in bacteria (DUF2066) 18 249 2.6E-70 T 12-10-2018 IPR018642 Protein of unknown function DUF2066 M892_05050 d7600bf6bc13f18507828f53d9ca402f 138 Pfam PF03994 Domain of Unknown Function (DUF350) 83 136 7.0E-14 T 12-10-2018 IPR007140 Protein of unknown function DUF350 M892_05050 d7600bf6bc13f18507828f53d9ca402f 138 Pfam PF03994 Domain of Unknown Function (DUF350) 17 70 1.5E-12 T 12-10-2018 IPR007140 Protein of unknown function DUF350 M892_22440 34ece7dd6bd91dfd2cce0a5010221e8f 434 Pfam PF06812 ImpA, N-terminal, type VI secretion system 9 119 2.9E-24 T 12-10-2018 IPR010657 ImpA, N-terminal M892_27280 b079db75ac6654eb5bafa3e2a9a21f98 199 Pfam PF01810 LysE type translocator 14 195 7.3E-19 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 M892_27690 8e6b5c089843fa867610941e20107aee 566 Pfam PF03961 Flagellar Assembly Protein A 89 552 8.9E-117 T 12-10-2018 IPR005646 Flagellar assembly protein A M892_01505 17a0b6e4c44c3b346fc579285bc32986 117 Pfam PF11042 Protein of unknown function (DUF2750) 13 113 2.3E-33 T 12-10-2018 IPR021284 Protein of unknown function DUF2750 M892_21290 64d6fdea29fbab561af9071c675396ba 51 Pfam PF11216 Protein of unknown function (DUF3012) 20 51 1.9E-22 T 12-10-2018 IPR021379 Protein of unknown function DUF3012 M892_18625 ebb6f31872a2d9cbd63a2f6d5c475563 209 Pfam PF02371 Transposase IS116/IS110/IS902 family 83 167 6.9E-20 T 12-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 M892_15960 5463c1c98c9893d7a004896f2da38895 306 Pfam PF13737 Transposase DDE domain 19 129 6.0E-43 T 12-10-2018 IPR025668 Transposase DDE domain M892_08580 8c9fb683a007aef19d14b39a942fa478 240 Pfam PF16537 Type II secretion system protein B 175 234 2.9E-25 T 12-10-2018 IPR032389 Type II secretion system protein B M892_19095 cdc56d792998fee314e8e3bae1954289 423 Pfam PF08874 Domain of unknown function (DUF1835) 100 215 4.9E-12 T 12-10-2018 IPR014973 Protein of unknown function DUF1835 M892_16345 36a195bea07b7c5bb411dce15ce98dd8 695 Pfam PF05170 AsmA family 1 585 8.8E-114 T 12-10-2018 IPR007844 AsmA M892_04665 0b379766cbb6ac7ecc0cc78107b74600 326 Pfam PF16806 Antiactivator protein ExsD 52 309 1.3E-69 T 12-10-2018 IPR031835 Antiactivator protein ExsD M892_16275 9fe090652c6d2b3a7727db82d2be5791 311 Pfam PF02653 Branched-chain amino acid transport system / permease component 7 265 1.5E-25 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 M892_07525 6ee2ce3ac27c552038a5a3615b011432 201 Pfam PF03553 Na+/H+ antiporter family 9 164 6.3E-40 T 12-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 M892_13030 d0d9622aa00a7778f0e6717099053c6c 159 Pfam PF06271 RDD family 9 149 5.0E-21 T 12-10-2018 IPR010432 RDD M892_28410 ebf993ec9db2612c51f56129c4ba3686 274 Pfam PF11185 Protein of unknown function (DUF2971) 89 199 1.8E-11 T 12-10-2018 IPR021352 Protein of unknown function DUF2971 M892_07975 df6af191b0b278f22e7948be92f8e9bf 494 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 328 437 5.6E-22 T 12-10-2018 IPR025299 CstA, C-terminal domain M892_07975 df6af191b0b278f22e7948be92f8e9bf 494 Pfam PF02554 Carbon starvation protein CstA 4 144 2.0E-33 T 12-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 M892_07190 1251de3a28886a32803b8bbe5a34df78 105 Pfam PF12286 Protein of unknown function (DUF3622) 4 74 4.7E-34 T 12-10-2018 IPR022069 Protein of unknown function DUF3622 M892_21910 38d33e0ec7558a6e1f09609686cc3209 302 Pfam PF13737 Transposase DDE domain 19 131 2.6E-42 T 12-10-2018 IPR025668 Transposase DDE domain M892_18545 31d45141996370d4c78c11143a79a169 430 Gene3D G3DSA:3.40.50.300 1 74 7.8E-28 T 12-10-2018 M892_24805 231cc5b99ba6a528f7bb48d4dd70e938 148 Pfam PF11911 Protein of unknown function (DUF3429) 6 146 7.8E-28 T 12-10-2018 IPR021836 Protein of unknown function DUF3429 M892_09875 1081cbca06adb7d460f9c645081d5a8f 189 Pfam PF11172 Protein of unknown function (DUF2959) 1 186 7.0E-83 T 12-10-2018 IPR021342 Protein of unknown function DUF2959 M892_18935 9e00e51503308ff918a087326fea9555 203 Pfam PF11140 Protein of unknown function (DUF2913) 13 193 2.8E-46 T 12-10-2018 IPR021316 Protein of unknown function DUF2913 M892_01735 e84cb1cec1dc80a2d6e34352e3135c3f 103 Pfam PF12321 Protein of unknown function (DUF3634) 2 100 7.8E-42 T 12-10-2018 IPR022090 Protein of unknown function DUF3634 M892_26815 80de55679c0392584d29eb7c40c118c5 246 Pfam PF07670 Nucleoside recognition 86 180 6.9E-11 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 M892_23505 5372670a09a82bc4ca73a832fa58ac76 75 Gene3D G3DSA:3.30.160.390 30 75 5.1E-6 T 12-10-2018 IPR038488 Integrase, DNA-binding domain superfamily M892_22305 a9b045bc1aebbbe58113871fa107af02 240 Pfam PF01925 Sulfite exporter TauE/SafE 11 231 3.4E-24 T 12-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 M892_21010 bd41fff3bfaffe618e9be187c556ecec 68 Pfam PF04964 Flp/Fap pilin component 16 63 4.8E-16 T 12-10-2018 IPR007047 Flp/Fap pilin component M892_04815 1ad23ae721f074ee32bb10bd31063289 109 Pfam PF01610 Transposase 2 100 1.4E-21 T 12-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain M892_21530 b49b39b6214d03b7969347478b9e1363 115 Pfam PF11140 Protein of unknown function (DUF2913) 46 99 5.0E-5 T 12-10-2018 IPR021316 Protein of unknown function DUF2913 M892_09930 f7dea12adcb3de871229054d03ad3d14 162 Pfam PF10675 Protein of unknown function (DUF2489) 14 145 5.1E-45 T 12-10-2018 IPR019617 Domain of unknown function DUF2489 M892_23305 a2e7c046cf1e543c54b898edd0098723 285 Pfam PF03606 C4-dicarboxylate anaerobic carrier 20 278 9.1E-71 T 12-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 M892_22200 9afc6cc76c4ad73d47b63834ef3fd661 179 Pfam PF06496 Protein of unknown function (DUF1097) 29 161 6.8E-38 T 12-10-2018 IPR009476 Protein of unknown function DUF1097 M892_19760 5b4dd613d65e5df5871d35e8bc823768 130 Pfam PF12614 Ribosome recycling factor 4 128 5.7E-57 T 12-10-2018 IPR022253 Ribosome recycling factor. bacterial M892_27310 27d26c67bea301ca434d6fa3b5e237ae 116 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 8 86 1.3E-24 T 12-10-2018 IPR025161 Putative transposase IS4/IS5 family M892_21045 e97e72d2e450a8c327d430a528d9bd13 300 Pfam PF00482 Type II secretion system (T2SS), protein F 132 256 3.4E-17 T 12-10-2018 IPR018076 Type II secretion system F domain M892_02535 c4b56d098d224da581f8a0e56a39c06a 282 Pfam PF13737 Transposase DDE domain 19 129 5.7E-45 T 12-10-2018 IPR025668 Transposase DDE domain M892_02860 fc982be9aaf68962e9134069a8c5a58f 61 SUPERFAMILY SSF55729 5 44 2.55E-5 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M892_02230 6fdbfe863b6cf45b9b381e1706f4f8cd 473 Pfam PF13440 Polysaccharide biosynthesis protein 28 252 2.9E-9 T 12-10-2018 M892_04085 3c9370c3eedee2385f5ef29b7233ddf8 269 Pfam PF07103 Protein of unknown function (DUF1365) 5 242 1.4E-69 T 12-10-2018 IPR010775 Protein of unknown function DUF1365 M892_28515 13bcc3d0dd554c0d346ce67a6613d338 119 Pfam PF05509 TraY domain 10 55 1.5E-17 T 12-10-2018 IPR008876 Relaxosome protein TraY GO:0000746|GO:0003677 M892_01135 ea529266f2635b0b1086077aa7388bbf 182 Pfam PF01554 MatE 2 122 1.4E-25 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M892_25530 2b6d18a73358bfe3e9014923d4cf9aaa 308 Pfam PF01882 Protein of unknown function DUF58 54 138 2.1E-20 T 12-10-2018 IPR002881 Domain of unknown function DUF58 M892_00530 47204bfce71d79389c570c1fe5621486 104 SUPERFAMILY SSF53098 1 97 2.2E-11 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M892_15030 16b558b8d8a43b86a6044998813c543b 130 Pfam PF07087 Protein of unknown function (DUF1353) 40 115 5.0E-10 T 12-10-2018 IPR010767 Campylobacter phage CGC-2007, Cje0229 M892_21680 e5be2a6ff0188c27c29f9c994e8a677a 333 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 3 176 4.6E-28 T 12-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase M892_07335 0e29781012abb0c04af951efb67e23d4 81 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 9 55 1.0E-14 T 12-10-2018 IPR010260 DNA-binding transcriptional activator AlpA M892_12590 7ccd353d4d2660ae799f2cb4cd11b056 221 TIGRFAM TIGR04219 OMP_w_GlyGly: outer membrane protein 6 221 2.2E-55 T 12-10-2018 IPR026387 Outer membrane protein