locus-tag class description VIBHAR_00003 PF01507 Phosphoadenosine phosphosulfate reductase family VIBHAR_00004 PF01077 Nitrite and sulphite reductase 4Fe-4S domain VIBHAR_00004 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain VIBHAR_00005 PF00667 FAD binding domain VIBHAR_00005 PF00258 Flavodoxin VIBHAR_00005 PF00175 Oxidoreductase NAD-binding domain VIBHAR_00009 PF01207 Dihydrouridine synthase (Dus) VIBHAR_00010 PF01475 Ferric uptake regulator family VIBHAR_00012 PF00342 Phosphoglucose isomerase VIBHAR_00014 PF01894 Uncharacterised protein family UPF0047 VIBHAR_00016 PF13006 Insertion element 4 transposase N-terminal VIBHAR_00016 PF01609 Transposase DDE domain VIBHAR_00017 PF01168 Alanine racemase, N-terminal domain VIBHAR_00017 PF00842 Alanine racemase, C-terminal domain VIBHAR_00018 PF03796 DnaB-like helicase C terminal domain VIBHAR_00018 PF00772 DnaB-like helicase N terminal domain VIBHAR_00020 PF01281 Ribosomal protein L9, N-terminal domain VIBHAR_00020 PF03948 Ribosomal protein L9, C-terminal domain VIBHAR_00021 PF01084 Ribosomal protein S18 VIBHAR_00022 PF00436 Single-strand binding protein family VIBHAR_00023 PF01250 Ribosomal protein S6 VIBHAR_00024 PF00834 Ribulose-phosphate 3 epimerase family VIBHAR_00025 PF02086 D12 class N6 adenine-specific DNA methyltransferase VIBHAR_00027 PF01761 3-dehydroquinate synthase VIBHAR_00028 PF01202 Shikimate kinase VIBHAR_00029 PF03958 Bacterial type II/III secretion system short domain VIBHAR_00029 PF07660 Secretin and TonB N terminus short domain VIBHAR_00029 PF00263 Bacterial type II and III secretion system protein VIBHAR_00029 PF11741 AMIN domain VIBHAR_00034 PF17092 Penicillin-binding protein OB-like domain VIBHAR_00034 PF00912 Transglycosylase VIBHAR_00034 PF00905 Penicillin binding protein transpeptidase domain VIBHAR_00035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBHAR_00035 PF03466 LysR substrate binding domain VIBHAR_00036 PF08534 Redoxin VIBHAR_00036 PF00462 Glutaredoxin VIBHAR_00037 PF07992 Pyridine nucleotide-disulphide oxidoreductase VIBHAR_00037 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VIBHAR_00040 PF00583 Acetyltransferase (GNAT) family VIBHAR_00040 PF14698 Argininosuccinate lyase C-terminal VIBHAR_00040 PF00206 Lyase VIBHAR_00041 PF00764 Arginosuccinate synthase VIBHAR_00042 PF00696 Amino acid kinase family VIBHAR_00043 PF01118 Semialdehyde dehydrogenase, NAD binding domain VIBHAR_00043 PF02774 Semialdehyde dehydrogenase, dimerisation domain VIBHAR_00044 PF01546 Peptidase family M20/M25/M40 VIBHAR_00044 PF07687 Peptidase dimerisation domain VIBHAR_00045 PF00311 Phosphoenolpyruvate carboxylase VIBHAR_00047 PF02219 Methylenetetrahydrofolate reductase VIBHAR_00048 PF00696 Amino acid kinase family VIBHAR_00048 PF00742 Homoserine dehydrogenase VIBHAR_00048 PF03447 Homoserine dehydrogenase, NAD binding domain VIBHAR_00049 PF01053 Cys/Met metabolism PLP-dependent enzyme VIBHAR_00050 PF01340 Met Apo-repressor, MetJ VIBHAR_00051 PF00390 Malic enzyme, N-terminal domain VIBHAR_00051 PF03949 Malic enzyme, NAD binding domain VIBHAR_00052 PF00210 Ferritin-like domain VIBHAR_00053 PF04324 BFD-like [2Fe-2S] binding domain VIBHAR_00054 PF03144 Elongation factor Tu domain 2 VIBHAR_00054 PF00009 Elongation factor Tu GTP binding domain VIBHAR_00054 PF03143 Elongation factor Tu C-terminal domain VIBHAR_00055 PF00679 Elongation factor G C-terminus VIBHAR_00055 PF14492 Elongation Factor G, domain II VIBHAR_00055 PF03764 Elongation factor G, domain IV VIBHAR_00055 PF03144 Elongation factor Tu domain 2 VIBHAR_00055 PF00009 Elongation factor Tu GTP binding domain VIBHAR_00056 PF00177 Ribosomal protein S7p/S5e VIBHAR_00057 PF00164 Ribosomal protein S12/S23 VIBHAR_00058 PF04077 DsrH like protein VIBHAR_00059 PF02635 DsrE/DsrF-like family VIBHAR_00060 PF02635 DsrE/DsrF-like family VIBHAR_00061 PF08348 YheO-like PAS domain VIBHAR_00061 PF13309 HTH domain VIBHAR_00062 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VIBHAR_00062 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase VIBHAR_00064 PF04102 SlyX VIBHAR_00065 PF01112 Asparaginase VIBHAR_00066 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VIBHAR_00068 PF02254 TrkA-N domain VIBHAR_00068 PF00999 Sodium/hydrogen exchanger family VIBHAR_00069 PF02525 Flavodoxin-like fold VIBHAR_00070 PF00005 ABC transporter VIBHAR_00070 PF12848 ABC transporter VIBHAR_00072 PF00561 alpha/beta hydrolase fold VIBHAR_00073 PF06794 Uncharacterised protein family (UPF0270) VIBHAR_00074 PF00485 Phosphoribulokinase / Uridine kinase family VIBHAR_00075 PF00027 Cyclic nucleotide-binding domain VIBHAR_00075 PF13545 Crp-like helix-turn-helix domain VIBHAR_00077 PF00171 Aldehyde dehydrogenase family VIBHAR_00078 PF04958 Arginine N-succinyltransferase beta subunit VIBHAR_00079 PF00202 Aminotransferase class-III VIBHAR_00080 PF00117 Glutamine amidotransferase class-I VIBHAR_00082 PF00579 tRNA synthetases class I (W and Y) VIBHAR_00083 PF13419 Haloacid dehalogenase-like hydrolase VIBHAR_00084 PF00588 SpoU rRNA Methylase family VIBHAR_00084 PF08032 RNA 2'-O ribose methyltransferase substrate binding VIBHAR_00085 PF00773 RNB domain VIBHAR_00085 PF08206 Ribonuclease B OB domain VIBHAR_00085 PF00575 S1 RNA binding domain VIBHAR_00085 PF17876 Cold shock domain VIBHAR_00085 PF08461 Ribonuclease R winged-helix domain VIBHAR_00086 PF02082 Transcriptional regulator VIBHAR_00087 PF00042 Globin VIBHAR_00087 PF00175 Oxidoreductase NAD-binding domain VIBHAR_00087 PF00970 Oxidoreductase FAD-binding domain VIBHAR_00088 PF08238 Sel1 repeat VIBHAR_00089 PF00709 Adenylosuccinate synthetase VIBHAR_00090 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) VIBHAR_00091 PF01145 SPFH domain / Band 7 family VIBHAR_00092 PF01145 SPFH domain / Band 7 family VIBHAR_00092 PF12221 Bacterial membrane protein N terminal VIBHAR_00093 PF16360 GTP-binding GTPase Middle Region VIBHAR_00093 PF13167 GTP-binding GTPase N-terminal VIBHAR_00093 PF01926 50S ribosome-binding GTPase VIBHAR_00094 PF17209 Hfq protein VIBHAR_00096 PF01119 DNA mismatch repair protein, C-terminal domain VIBHAR_00096 PF08676 MutL C terminal dimerisation domain VIBHAR_00097 PF01520 N-acetylmuramoyl-L-alanine amidase VIBHAR_00098 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE VIBHAR_00099 PF08331 Domain of unknown function (DUF1730) VIBHAR_00112 PF00929 Exonuclease VIBHAR_00113 PF03193 RsgA GTPase VIBHAR_00114 PF02666 Phosphatidylserine decarboxylase VIBHAR_00115 PF14706 Transposase DNA-binding VIBHAR_00115 PF01609 Transposase DDE domain VIBHAR_00115 PF02281 Transposase Tn5 dimerisation domain VIBHAR_00118 PF00939 Sodium:sulfate symporter transmembrane region VIBHAR_00119 PF02743 Cache domain VIBHAR_00119 PF00672 HAMP domain VIBHAR_00119 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBHAR_00121 PF06415 BPG-independent PGAM N-terminus (iPGM_N) VIBHAR_00121 PF01676 Metalloenzyme superfamily VIBHAR_00122 PF00581 Rhodanese-like domain VIBHAR_00123 PF02556 Preprotein translocase subunit SecB VIBHAR_00124 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus VIBHAR_00124 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus VIBHAR_00125 PF00132 Bacterial transferase hexapeptide (six repeats) VIBHAR_00125 PF06426 Serine acetyltransferase, N-terminal VIBHAR_00126 PF01551 Peptidase family M23 VIBHAR_00128 PF08360 QacR-like protein, C-terminal region VIBHAR_00128 PF00440 Bacterial regulatory proteins, tetR family VIBHAR_00130 PF00152 tRNA synthetases class II (D, K and N) VIBHAR_00131 PF02910 Fumarate reductase flavoprotein C-term VIBHAR_00131 PF00890 FAD binding domain VIBHAR_00132 PF13085 2Fe-2S iron-sulfur cluster binding domain VIBHAR_00132 PF13183 4Fe-4S dicluster domain VIBHAR_00133 PF02300 Fumarate reductase subunit C VIBHAR_00134 PF02313 Fumarate reductase subunit D VIBHAR_00137 PF08207 Elongation factor P (EF-P) KOW-like domain VIBHAR_00137 PF09285 Elongation factor P, C-terminal VIBHAR_00137 PF01132 Elongation factor P (EF-P) OB domain VIBHAR_00138 PF04055 Radical SAM superfamily VIBHAR_00139 PF02308 MgtC family VIBHAR_00141 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) VIBHAR_00142 PF00118 TCP-1/cpn60 chaperonin family VIBHAR_00143 PF00166 Chaperonin 10 Kd subunit VIBHAR_00144 PF01554 MatE VIBHAR_00145 PF00365 Phosphofructokinase VIBHAR_00146 PF01545 Cation efflux family VIBHAR_00146 PF16916 Dimerisation domain of Zinc Transporter VIBHAR_00149 PF00072 Response regulator receiver domain VIBHAR_00149 PF00486 Transcriptional regulatory protein, C terminal VIBHAR_00150 PF16527 Two-component sensor protein CpxA, periplasmic domain VIBHAR_00150 PF00672 HAMP domain VIBHAR_00150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBHAR_00150 PF00512 His Kinase A (phospho-acceptor) domain VIBHAR_00151 PF02777 Iron/manganese superoxide dismutases, C-terminal domain VIBHAR_00151 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain VIBHAR_00152 PF00588 SpoU rRNA Methylase family VIBHAR_00153 PF04186 FxsA cytoplasmic membrane protein VIBHAR_00154 PF00206 Lyase VIBHAR_00154 PF10415 Fumarase C C-terminus VIBHAR_00155 PF03605 Anaerobic c4-dicarboxylate membrane transporter VIBHAR_00156 PF02683 Cytochrome C biogenesis protein transmembrane region VIBHAR_00156 PF11412 Disulphide bond corrector protein DsbC VIBHAR_00157 PF00196 Bacterial regulatory proteins, luxR family VIBHAR_00157 PF00072 Response regulator receiver domain VIBHAR_00158 PF01914 MarC family integral membrane protein VIBHAR_00160 PF00474 Sodium:solute symporter family VIBHAR_00163 PF00206 Lyase VIBHAR_00163 PF10415 Fumarase C C-terminus VIBHAR_00164 PF00072 Response regulator receiver domain VIBHAR_00164 PF00512 His Kinase A (phospho-acceptor) domain VIBHAR_00164 PF09308 LuxQ, periplasmic VIBHAR_00164 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBHAR_00166 PF12832 MFS_1 like family VIBHAR_00169 PF16177 Acetyl-coenzyme A synthetase N-terminus VIBHAR_00169 PF00501 AMP-binding enzyme VIBHAR_00169 PF13193 AMP-binding enzyme C-terminal domain VIBHAR_00170 PF01220 Dehydroquinase class II VIBHAR_00171 PF00364 Biotin-requiring enzyme VIBHAR_00172 PF02785 Biotin carboxylase C-terminal domain VIBHAR_00172 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VIBHAR_00172 PF00289 Biotin carboxylase, N-terminal domain VIBHAR_00174 PF01207 Dihydrouridine synthase (Dus) VIBHAR_00175 PF02954 Bacterial regulatory protein, Fis family VIBHAR_00176 PF13188 PAS domain VIBHAR_00176 PF03707 Bacterial signalling protein N terminal repeat VIBHAR_00176 PF00990 Diguanylate cyclase, GGDEF domain VIBHAR_00176 PF00563 EAL domain VIBHAR_00179 PF13817 IS66 C-terminal element VIBHAR_00179 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_00179 PF13007 Transposase C of IS166 homeodomain VIBHAR_00179 PF03050 Transposase IS66 family VIBHAR_00182 PF00665 Integrase core domain VIBHAR_00183 PF01695 IstB-like ATP binding protein VIBHAR_00184 PF13358 DDE superfamily endonuclease VIBHAR_00186 PF13358 DDE superfamily endonuclease VIBHAR_00188 PF13358 DDE superfamily endonuclease VIBHAR_00190 PF13358 DDE superfamily endonuclease VIBHAR_00192 PF13358 DDE superfamily endonuclease VIBHAR_00205 PF01276 Orn/Lys/Arg decarboxylase, major domain VIBHAR_00205 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain VIBHAR_00205 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain VIBHAR_00206 PF13520 Amino acid permease VIBHAR_00207 PF00486 Transcriptional regulatory protein, C terminal VIBHAR_00207 PF18500 CadC C-terminal domain 1 VIBHAR_00208 PF13411 MerR HTH family regulatory protein VIBHAR_00210 PF02142 MGS-like domain VIBHAR_00210 PF01808 AICARFT/IMPCHase bienzyme VIBHAR_00211 PF02844 Phosphoribosylglycinamide synthetase, N domain VIBHAR_00211 PF02843 Phosphoribosylglycinamide synthetase, C domain VIBHAR_00211 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain VIBHAR_00213 PF00216 Bacterial DNA-binding protein VIBHAR_00214 PF00571 CBS domain VIBHAR_00214 PF01595 Cyclin M transmembrane N-terminal domain VIBHAR_00215 PF04222 Protein of unknown function (DUF416) VIBHAR_00216 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VIBHAR_00217 PF03167 Uracil DNA glycosylase superfamily VIBHAR_00219 PF01208 Uroporphyrinogen decarboxylase (URO-D) VIBHAR_00222 PF09297 NADH pyrophosphatase zinc ribbon domain VIBHAR_00222 PF00293 NUDIX domain VIBHAR_00223 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ VIBHAR_00224 PF04997 RNA polymerase Rpb1, domain 1 VIBHAR_00224 PF00623 RNA polymerase Rpb1, domain 2 VIBHAR_00224 PF04983 RNA polymerase Rpb1, domain 3 VIBHAR_00224 PF05000 RNA polymerase Rpb1, domain 4 VIBHAR_00224 PF04998 RNA polymerase Rpb1, domain 5 VIBHAR_00225 PF04561 RNA polymerase Rpb2, domain 2 VIBHAR_00225 PF04563 RNA polymerase beta subunit VIBHAR_00225 PF04565 RNA polymerase Rpb2, domain 3 VIBHAR_00225 PF04560 RNA polymerase Rpb2, domain 7 VIBHAR_00225 PF00562 RNA polymerase Rpb2, domain 6 VIBHAR_00225 PF10385 RNA polymerase beta subunit external 1 domain VIBHAR_00226 PF00542 Ribosomal protein L7/L12 C-terminal domain VIBHAR_00226 PF16320 Ribosomal protein L7/L12 dimerisation domain VIBHAR_00227 PF00466 Ribosomal protein L10 VIBHAR_00228 PF00687 Ribosomal protein L1p/L10e family VIBHAR_00229 PF03946 Ribosomal protein L11, N-terminal domain VIBHAR_00229 PF00298 Ribosomal protein L11, RNA binding domain VIBHAR_00230 PF02357 Transcription termination factor nusG VIBHAR_00230 PF00467 KOW motif VIBHAR_00231 PF00584 SecE/Sec61-gamma subunits of protein translocation complex VIBHAR_00233 PF03143 Elongation factor Tu C-terminal domain VIBHAR_00233 PF03144 Elongation factor Tu domain 2 VIBHAR_00233 PF00009 Elongation factor Tu GTP binding domain VIBHAR_00238 PF00485 Phosphoribulokinase / Uridine kinase family VIBHAR_00240 PF02237 Biotin protein ligase C terminal domain VIBHAR_00240 PF08279 HTH domain VIBHAR_00240 PF03099 Biotin/lipoate A/B protein ligase family VIBHAR_00241 PF01565 FAD binding domain VIBHAR_00241 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain VIBHAR_00243 PF13091 PLD-like domain VIBHAR_00256 PF01177 Asp/Glu/Hydantoin racemase VIBHAR_00261 PF00593 TonB dependent receptor VIBHAR_00261 PF07715 TonB-dependent Receptor Plug Domain VIBHAR_00262 PF05958 tRNA (Uracil-5-)-methyltransferase VIBHAR_00264 PF00440 Bacterial regulatory proteins, tetR family VIBHAR_00265 PF07992 Pyridine nucleotide-disulphide oxidoreductase VIBHAR_00265 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VIBHAR_00266 PF01554 MatE VIBHAR_00268 PF00717 Peptidase S24-like VIBHAR_00268 PF01726 LexA DNA binding domain VIBHAR_00269 PF01553 Acyltransferase VIBHAR_00271 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) VIBHAR_00272 PF01040 UbiA prenyltransferase family VIBHAR_00273 PF04345 Chorismate lyase VIBHAR_00274 PF03748 Flagellar basal body-associated protein FliL VIBHAR_00275 PF01694 Rhomboid family VIBHAR_00275 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease VIBHAR_00276 PF00581 Rhodanese-like domain VIBHAR_00277 PF00140 Sigma-70 factor, region 1.2 VIBHAR_00277 PF04542 Sigma-70 region 2 VIBHAR_00277 PF04545 Sigma-70, region 4 VIBHAR_00278 PF18075 FtsX extracellular domain VIBHAR_00279 PF00005 ABC transporter VIBHAR_00280 PF02881 SRP54-type protein, helical bundle domain VIBHAR_00280 PF00448 SRP54-type protein, GTPase domain VIBHAR_00283 PF01914 MarC family integral membrane protein VIBHAR_00289 PF13340 Putative transposase of IS4/5 family (DUF4096) VIBHAR_00290 PF10694 Protein of unknown function (DUF2500) VIBHAR_00293 PF01609 Transposase DDE domain VIBHAR_00293 PF14706 Transposase DNA-binding VIBHAR_00293 PF02281 Transposase Tn5 dimerisation domain VIBHAR_00296 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VIBHAR_00296 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VIBHAR_00297 PF01022 Bacterial regulatory protein, arsR family VIBHAR_00298 PF00563 EAL domain VIBHAR_00298 PF08668 HDOD domain VIBHAR_00299 PF01810 LysE type translocator VIBHAR_00300 PF12146 Serine aminopeptidase, S33 VIBHAR_00305 PF00990 Diguanylate cyclase, GGDEF domain VIBHAR_00305 PF10442 FIST C domain VIBHAR_00305 PF00563 EAL domain VIBHAR_00305 PF08495 FIST N domain VIBHAR_00306 PF13419 Haloacid dehalogenase-like hydrolase VIBHAR_00307 PF00589 Phage integrase family VIBHAR_00307 PF02899 Phage integrase, N-terminal SAM-like domain VIBHAR_00309 PF01678 Diaminopimelate epimerase VIBHAR_00310 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain VIBHAR_00310 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain VIBHAR_00312 PF01491 Frataxin-like domain VIBHAR_00313 PF01295 Adenylate cyclase, class-I VIBHAR_00313 PF12633 Adenylate cyclase NT domain VIBHAR_00314 PF03900 Porphobilinogen deaminase, C-terminal domain VIBHAR_00314 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain VIBHAR_00315 PF02602 Uroporphyrinogen-III synthase HemD VIBHAR_00316 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase VIBHAR_00317 PF07219 HemY protein N-terminus VIBHAR_00319 PF13358 DDE superfamily endonuclease VIBHAR_00321 PF13358 DDE superfamily endonuclease VIBHAR_00323 PF13358 DDE superfamily endonuclease VIBHAR_00332 PF00175 Oxidoreductase NAD-binding domain VIBHAR_00333 PF00111 2Fe-2S iron-sulfur cluster binding domain VIBHAR_00334 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase VIBHAR_00336 PF07497 Rho termination factor, RNA-binding domain VIBHAR_00336 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VIBHAR_00336 PF07498 Rho termination factor, N-terminal domain VIBHAR_00337 PF00085 Thioredoxin VIBHAR_00338 PF00270 DEAD/DEAH box helicase VIBHAR_00338 PF00271 Helicase conserved C-terminal domain VIBHAR_00339 PF02541 Ppx/GppA phosphatase family VIBHAR_00341 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) VIBHAR_00342 PF02592 Putative vitamin uptake transporter VIBHAR_00344 PF09382 RQC domain VIBHAR_00344 PF16124 RecQ zinc-binding VIBHAR_00344 PF00270 DEAD/DEAH box helicase VIBHAR_00344 PF00570 HRDC domain VIBHAR_00344 PF00271 Helicase conserved C-terminal domain VIBHAR_00345 PF00892 EamA-like transporter family VIBHAR_00347 PF01810 LysE type translocator VIBHAR_00350 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) VIBHAR_00351 PF00580 UvrD/REP helicase N-terminal domain VIBHAR_00351 PF13361 UvrD-like helicase C-terminal domain VIBHAR_00353 PF05114 Protein of unknown function (DUF692) VIBHAR_00357 PF03466 LysR substrate binding domain VIBHAR_00357 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBHAR_00358 PF07690 Major Facilitator Superfamily VIBHAR_00360 PF00557 Metallopeptidase family M24 VIBHAR_00360 PF01321 Creatinase/Prolidase N-terminal domain VIBHAR_00360 PF00557 Metallopeptidase family M24 VIBHAR_00360 PF01321 Creatinase/Prolidase N-terminal domain VIBHAR_00361 PF06968 Biotin and Thiamin Synthesis associated domain VIBHAR_00361 PF04055 Radical SAM superfamily VIBHAR_00362 PF05690 Thiazole biosynthesis protein ThiG VIBHAR_00363 PF02597 ThiS family VIBHAR_00364 PF00899 ThiF family VIBHAR_00365 PF02581 Thiamine monophosphate synthase VIBHAR_00366 PF01964 Radical SAM ThiC family VIBHAR_00366 PF13667 ThiC-associated domain VIBHAR_00367 PF02537 CrcB-like protein, Camphor Resistance (CrcB) VIBHAR_00368 PF07732 Multicopper oxidase VIBHAR_00368 PF00394 Multicopper oxidase VIBHAR_00368 PF07731 Multicopper oxidase VIBHAR_00370 PF13358 DDE superfamily endonuclease VIBHAR_00372 PF13358 DDE superfamily endonuclease VIBHAR_00380 PF00132 Bacterial transferase hexapeptide (six repeats) VIBHAR_00382 PF08501 Shikimate dehydrogenase substrate binding domain VIBHAR_00382 PF18317 Shikimate 5'-dehydrogenase C-terminal domain VIBHAR_00382 PF01488 Shikimate / quinate 5-dehydrogenase VIBHAR_00383 PF01218 Coproporphyrinogen III oxidase VIBHAR_00384 PF01300 Telomere recombination VIBHAR_00385 PF00731 AIR carboxylase VIBHAR_00386 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain VIBHAR_00386 PF02222 ATP-grasp domain VIBHAR_00387 PF01396 Topoisomerase DNA binding C4 zinc finger VIBHAR_00388 PF04361 Protein of unknown function (DUF494) VIBHAR_00389 PF17782 DprA winged helix domain VIBHAR_00389 PF02481 DNA recombination-mediator protein A VIBHAR_00391 PF01327 Polypeptide deformylase VIBHAR_00392 PF02911 Formyl transferase, C-terminal domain VIBHAR_00392 PF00551 Formyl transferase VIBHAR_00393 PF01189 16S rRNA methyltransferase RsmB/F VIBHAR_00393 PF01029 NusB family VIBHAR_00394 PF02254 TrkA-N domain VIBHAR_00394 PF02080 TrkA-C domain VIBHAR_00395 PF02386 Cation transport protein VIBHAR_00397 PF03006 Haemolysin-III related VIBHAR_00398 PF07070 SpoOM protein VIBHAR_00401 PF06288 Protein of unknown function (DUF1040) VIBHAR_00402 PF13746 4Fe-4S dicluster domain VIBHAR_00402 PF12801 4Fe-4S binding domain VIBHAR_00402 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase VIBHAR_00403 PF01636 Phosphotransferase enzyme family VIBHAR_00404 PF01323 DSBA-like thioredoxin domain VIBHAR_00405 PF01609 Transposase DDE domain VIBHAR_00405 PF13006 Insertion element 4 transposase N-terminal VIBHAR_00406 PF01553 Acyltransferase VIBHAR_00408 PF00990 Diguanylate cyclase, GGDEF domain VIBHAR_00408 PF17152 Periplasmic sensor domain VIBHAR_00409 PF13335 Magnesium chelatase, subunit ChlI C-terminal VIBHAR_00409 PF01078 Magnesium chelatase, subunit ChlI VIBHAR_00410 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VIBHAR_00410 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VIBHAR_00410 PF00205 Thiamine pyrophosphate enzyme, central domain VIBHAR_00412 PF01063 Amino-transferase class IV VIBHAR_00413 PF00920 Dehydratase family VIBHAR_00414 PF00291 Pyridoxal-phosphate dependent enzyme VIBHAR_00414 PF00585 C-terminal regulatory domain of Threonine dehydratase VIBHAR_00415 PF03466 LysR substrate binding domain VIBHAR_00415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBHAR_00416 PF07690 Major Facilitator Superfamily VIBHAR_00417 PF00497 Bacterial extracellular solute-binding proteins, family 3 VIBHAR_00418 PF00528 Binding-protein-dependent transport system inner membrane component VIBHAR_00419 PF00132 Bacterial transferase hexapeptide (six repeats) VIBHAR_00419 PF12804 MobA-like NTP transferase domain VIBHAR_00420 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain VIBHAR_00420 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain VIBHAR_00421 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VIBHAR_00421 PF02874 ATP synthase alpha/beta family, beta-barrel domain VIBHAR_00422 PF00231 ATP synthase VIBHAR_00423 PF00306 ATP synthase alpha/beta chain, C terminal domain VIBHAR_00423 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VIBHAR_00423 PF02874 ATP synthase alpha/beta family, beta-barrel domain VIBHAR_00424 PF00213 ATP synthase delta (OSCP) subunit VIBHAR_00426 PF00430 ATP synthase B/B' CF(0) VIBHAR_00427 PF00137 ATP synthase subunit C VIBHAR_00428 PF00119 ATP synthase A chain VIBHAR_00429 PF03899 ATP synthase I chain VIBHAR_00430 PF17762 HTH domain found in ParB protein VIBHAR_00430 PF02195 ParB-like nuclease domain VIBHAR_00431 PF13614 AAA domain VIBHAR_00432 PF02527 rRNA small subunit methyltransferase G VIBHAR_00433 PF13932 GidA associated domain VIBHAR_00433 PF01134 Glucose inhibited division protein A VIBHAR_00434 PF00258 Flavodoxin VIBHAR_00435 PF12631 MnmE helical domain VIBHAR_00435 PF01926 50S ribosome-binding GTPase VIBHAR_00435 PF10396 GTP-binding protein TrmE N-terminus VIBHAR_00436 PF14849 YidC periplasmic domain VIBHAR_00436 PF02096 60Kd inner membrane protein VIBHAR_00437 PF00825 Ribonuclease P VIBHAR_00438 PF00468 Ribosomal protein L34 VIBHAR_00439 PF00005 ABC transporter VIBHAR_00440 PF00528 Binding-protein-dependent transport system inner membrane component VIBHAR_00441 PF00497 Bacterial extracellular solute-binding proteins, family 3 VIBHAR_00442 PF00308 Bacterial dnaA protein VIBHAR_00442 PF11638 DnaA N-terminal domain VIBHAR_00442 PF08299 Bacterial dnaA protein helix-turn-helix VIBHAR_00443 PF02767 DNA polymerase III beta subunit, central domain VIBHAR_00443 PF02768 DNA polymerase III beta subunit, C-terminal domain VIBHAR_00443 PF00712 DNA polymerase III beta subunit, N-terminal domain VIBHAR_00444 PF02463 RecF/RecN/SMC N terminal domain VIBHAR_00445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBHAR_00445 PF18053 DNA gyrase B subunit insert domain VIBHAR_00445 PF00204 DNA gyrase B VIBHAR_00445 PF00986 DNA gyrase B subunit, carboxyl terminus VIBHAR_00445 PF01751 Toprim domain VIBHAR_00446 PF00011 Hsp20/alpha crystallin family VIBHAR_00447 PF00155 Aminotransferase class I and II VIBHAR_00448 PF01609 Transposase DDE domain VIBHAR_00448 PF13006 Insertion element 4 transposase N-terminal VIBHAR_00449 PF05746 DALR anticodon binding domain VIBHAR_00449 PF02092 Glycyl-tRNA synthetase beta subunit VIBHAR_00450 PF02091 Glycyl-tRNA synthetase alpha subunit VIBHAR_00451 PF01169 Uncharacterized protein family UPF0016 VIBHAR_00453 PF01206 Sulfurtransferase TusA VIBHAR_00455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBHAR_00455 PF03466 LysR substrate binding domain VIBHAR_00456 PF14706 Transposase DNA-binding VIBHAR_00456 PF01609 Transposase DDE domain VIBHAR_00456 PF02281 Transposase Tn5 dimerisation domain VIBHAR_00457 PF01609 Transposase DDE domain VIBHAR_00457 PF14706 Transposase DNA-binding VIBHAR_00457 PF02281 Transposase Tn5 dimerisation domain VIBHAR_00458 PF00107 Zinc-binding dehydrogenase VIBHAR_00458 PF08240 Alcohol dehydrogenase GroES-like domain VIBHAR_00459 PF02803 Thiolase, C-terminal domain VIBHAR_00459 PF00108 Thiolase, N-terminal domain VIBHAR_00460 PF00378 Enoyl-CoA hydratase/isomerase VIBHAR_00460 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VIBHAR_00460 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VIBHAR_00461 PF09186 Domain of unknown function (DUF1949) VIBHAR_00461 PF01205 Uncharacterized protein family UPF0029 VIBHAR_00462 PF02386 Cation transport protein VIBHAR_00463 PF12724 Flavodoxin domain VIBHAR_00474 PF13358 DDE superfamily endonuclease VIBHAR_00475 PF13358 DDE superfamily endonuclease VIBHAR_00477 PF03466 LysR substrate binding domain VIBHAR_00477 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBHAR_00478 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain VIBHAR_00478 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain VIBHAR_00479 PF04380 Membrane fusogenic activity VIBHAR_00480 PF00873 AcrB/AcrD/AcrF family VIBHAR_00481 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VIBHAR_00482 PF16295 Tetracyclin repressor-like, C-terminal domain VIBHAR_00482 PF00440 Bacterial regulatory proteins, tetR family VIBHAR_00483 PF13361 UvrD-like helicase C-terminal domain VIBHAR_00483 PF00580 UvrD/REP helicase N-terminal domain VIBHAR_00484 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VIBHAR_00490 PF13419 Haloacid dehalogenase-like hydrolase VIBHAR_00492 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VIBHAR_00492 PF00005 ABC transporter VIBHAR_00493 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VIBHAR_00495 PF12911 N-terminal TM domain of oligopeptide transport permease C VIBHAR_00495 PF00528 Binding-protein-dependent transport system inner membrane component VIBHAR_00497 PF14706 Transposase DNA-binding VIBHAR_00497 PF01609 Transposase DDE domain VIBHAR_00497 PF02281 Transposase Tn5 dimerisation domain VIBHAR_00498 PF02281 Transposase Tn5 dimerisation domain VIBHAR_00498 PF01609 Transposase DDE domain VIBHAR_00498 PF14706 Transposase DNA-binding VIBHAR_00502 PF13340 Putative transposase of IS4/5 family (DUF4096) VIBHAR_00506 PF00069 Protein kinase domain VIBHAR_00507 PF00356 Bacterial regulatory proteins, lacI family VIBHAR_00507 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VIBHAR_00508 PF03466 LysR substrate binding domain VIBHAR_00508 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBHAR_00509 PF00893 Small Multidrug Resistance protein VIBHAR_00510 PF00893 Small Multidrug Resistance protein VIBHAR_00511 PF02371 Transposase IS116/IS110/IS902 family VIBHAR_00511 PF01548 Transposase VIBHAR_00512 PF00920 Dehydratase family VIBHAR_00513 PF01202 Shikimate kinase VIBHAR_00514 PF02447 GntP family permease VIBHAR_00515 PF01081 KDPG and KHG aldolase VIBHAR_00516 PF00313 'Cold-shock' DNA-binding domain VIBHAR_00522 PF00313 'Cold-shock' DNA-binding domain VIBHAR_00523 PF07992 Pyridine nucleotide-disulphide oxidoreductase VIBHAR_00523 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VIBHAR_00525 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ VIBHAR_00526 PF01432 Peptidase family M3 VIBHAR_00527 PF01037 Lrp/AsnC ligand binding domain VIBHAR_00528 PF00990 Diguanylate cyclase, GGDEF domain VIBHAR_00528 PF08448 PAS fold VIBHAR_00528 PF00563 EAL domain VIBHAR_00529 PF04445 Putative SAM-dependent methyltransferase VIBHAR_00531 PF00892 EamA-like transporter family VIBHAR_00532 PF00582 Universal stress protein family VIBHAR_00534 PF00210 Ferritin-like domain VIBHAR_00535 PF10625 Universal stress protein B (UspB) VIBHAR_00540 PF03050 Transposase IS66 family VIBHAR_00540 PF13817 IS66 C-terminal element VIBHAR_00540 PF13007 Transposase C of IS166 homeodomain VIBHAR_00540 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_00541 PF00817 impB/mucB/samB family VIBHAR_00541 PF13438 Domain of unknown function (DUF4113) VIBHAR_00541 PF11799 impB/mucB/samB family C-terminal domain VIBHAR_00542 PF01320 Colicin immunity protein / pyocin immunity protein VIBHAR_00543 PF11570 Coiled-coil receptor-binding R-domain of colicin E2 VIBHAR_00543 PF03515 Colicin-like bacteriocin tRNase domain VIBHAR_00548 PF00704 Glycosyl hydrolases family 18 VIBHAR_00549 PF13737 Transposase DDE domain VIBHAR_00550 PF13737 Transposase DDE domain VIBHAR_00554 PF04545 Sigma-70, region 4 VIBHAR_00554 PF04542 Sigma-70 region 2 VIBHAR_00556 PF12727 PBP superfamily domain VIBHAR_00556 PF12728 Helix-turn-helix domain VIBHAR_00557 PF13340 Putative transposase of IS4/5 family (DUF4096) VIBHAR_00558 PF01609 Transposase DDE domain VIBHAR_00558 PF13006 Insertion element 4 transposase N-terminal VIBHAR_00559 PF00563 EAL domain VIBHAR_00559 PF00990 Diguanylate cyclase, GGDEF domain VIBHAR_00559 PF03707 Bacterial signalling protein N terminal repeat VIBHAR_00561 PF02646 RmuC family VIBHAR_00562 PF01209 ubiE/COQ5 methyltransferase family VIBHAR_00563 PF02036 SCP-2 sterol transfer family VIBHAR_00564 PF03109 ABC1 family VIBHAR_00565 PF02416 mttA/Hcf106 family VIBHAR_00566 PF02416 mttA/Hcf106 family VIBHAR_00567 PF00902 Sec-independent protein translocase protein (TatC) VIBHAR_00569 PF01026 TatD related DNase VIBHAR_00570 PF00490 Delta-aminolevulinic acid dehydratase VIBHAR_00572 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain VIBHAR_00572 PF00476 DNA polymerase family A VIBHAR_00572 PF01367 5'-3' exonuclease, C-terminal SAM fold VIBHAR_00572 PF01612 3'-5' exonuclease VIBHAR_00574 PF01926 50S ribosome-binding GTPase VIBHAR_00575 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VIBHAR_00579 PF04220 Der GTPase activator (YihI) VIBHAR_00580 PF10675 Protein of unknown function (DUF2489) VIBHAR_00581 PF04055 Radical SAM superfamily VIBHAR_00581 PF06969 HemN C-terminal domain VIBHAR_00582 PF00962 Adenosine/AMP deaminase VIBHAR_00583 PF00990 Diguanylate cyclase, GGDEF domain VIBHAR_00583 PF03707 Bacterial signalling protein N terminal repeat VIBHAR_00583 PF00563 EAL domain VIBHAR_00584 PF02954 Bacterial regulatory protein, Fis family VIBHAR_00584 PF00158 Sigma-54 interaction domain VIBHAR_00584 PF00072 Response regulator receiver domain VIBHAR_00585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBHAR_00585 PF00512 His Kinase A (phospho-acceptor) domain VIBHAR_00585 PF00989 PAS fold VIBHAR_00588 PF03951 Glutamine synthetase, beta-Grasp domain VIBHAR_00588 PF00120 Glutamine synthetase, catalytic domain VIBHAR_00593 PF03631 Virulence factor BrkB VIBHAR_00594 PF02580 D-Tyr-tRNA(Tyr) deacylase VIBHAR_00595 PF09500 Putative thioesterase (yiiD_Cterm) VIBHAR_00595 PF00583 Acetyltransferase (GNAT) family VIBHAR_00597 PF01293 Phosphoenolpyruvate carboxykinase VIBHAR_00598 PF01430 Hsp33 protein VIBHAR_00599 PF01479 S4 domain VIBHAR_00600 PF11356 Type II secretion system protein C VIBHAR_00601 PF03958 Bacterial type II/III secretion system short domain VIBHAR_00601 PF00263 Bacterial type II and III secretion system protein VIBHAR_00602 PF00437 Type II/IV secretion system protein VIBHAR_00603 PF00482 Type II secretion system (T2SS), protein F VIBHAR_00604 PF08334 Type II secretion system (T2SS), protein G VIBHAR_00604 PF07963 Prokaryotic N-terminal methylation motif VIBHAR_00605 PF12019 Type II transport protein GspH VIBHAR_00606 PF02501 Type II secretion system (T2SS), protein I VIBHAR_00606 PF07963 Prokaryotic N-terminal methylation motif VIBHAR_00607 PF11612 Type II secretion system (T2SS), protein J VIBHAR_00607 PF07963 Prokaryotic N-terminal methylation motif VIBHAR_00608 PF03934 Type II secretion system (T2SS), protein K VIBHAR_00609 PF05134 Type II secretion system (T2SS), protein L VIBHAR_00609 PF12693 GspL periplasmic domain VIBHAR_00610 PF04612 Type II secretion system (T2SS), protein M VIBHAR_00611 PF01203 Type II secretion system (T2SS), protein N VIBHAR_00612 PF00459 Inositol monophosphatase family VIBHAR_00613 PF00293 NUDIX domain VIBHAR_00614 PF01106 NifU-like domain VIBHAR_00614 PF01521 Iron-sulphur cluster biosynthesis VIBHAR_00615 PF00156 Phosphoribosyl transferase domain VIBHAR_00616 PF00561 alpha/beta hydrolase fold VIBHAR_00618 PF17674 HHH domain VIBHAR_00618 PF00575 S1 RNA binding domain VIBHAR_00618 PF09371 Tex-like protein N-terminal domain VIBHAR_00618 PF16921 Tex protein YqgF-like domain VIBHAR_00620 PF03449 Transcription elongation factor, N-terminal VIBHAR_00620 PF01272 Transcription elongation factor, GreA/GreB, C-term VIBHAR_00621 PF00486 Transcriptional regulatory protein, C terminal VIBHAR_00621 PF00072 Response regulator receiver domain VIBHAR_00622 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBHAR_00622 PF00672 HAMP domain VIBHAR_00622 PF00512 His Kinase A (phospho-acceptor) domain VIBHAR_00623 PF00860 Permease family VIBHAR_00624 PF00326 Prolyl oligopeptidase family VIBHAR_00625 PF00271 Helicase conserved C-terminal domain VIBHAR_00625 PF00270 DEAD/DEAH box helicase VIBHAR_00625 PF17191 RecG wedge domain VIBHAR_00626 PF00588 SpoU rRNA Methylase family VIBHAR_00626 PF12105 SpoU, rRNA methylase, C-terminal VIBHAR_00627 PF02824 TGS domain VIBHAR_00627 PF04607 Region found in RelA / SpoT proteins VIBHAR_00627 PF13291 ACT domain VIBHAR_00629 PF01192 RNA polymerase Rpb6 VIBHAR_00630 PF00625 Guanylate kinase VIBHAR_00634 PF02472 Biopolymer transport protein ExbD/TolR VIBHAR_00635 PF01618 MotA/TolQ/ExbB proton channel family VIBHAR_00638 PF07715 TonB-dependent Receptor Plug Domain VIBHAR_00638 PF00593 TonB dependent receptor VIBHAR_00639 PF00528 Binding-protein-dependent transport system inner membrane component VIBHAR_00640 PF00528 Binding-protein-dependent transport system inner membrane component VIBHAR_00640 PF12911 N-terminal TM domain of oligopeptide transport permease C VIBHAR_00641 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VIBHAR_00642 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VIBHAR_00642 PF00005 ABC transporter VIBHAR_00643 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VIBHAR_00643 PF00005 ABC transporter VIBHAR_00646 PF00892 EamA-like transporter family VIBHAR_00647 PF03755 YicC-like family, N-terminal region VIBHAR_00647 PF08340 Domain of unknown function (DUF1732) VIBHAR_00648 PF01138 3' exoribonuclease family, domain 1 VIBHAR_00648 PF03725 3' exoribonuclease family, domain 2 VIBHAR_00650 PF03279 Bacterial lipid A biosynthesis acyltransferase VIBHAR_00651 PF00440 Bacterial regulatory proteins, tetR family VIBHAR_00652 PF04127 DNA / pantothenate metabolism flavoprotein VIBHAR_00652 PF02441 Flavoprotein VIBHAR_00653 PF04002 RadC-like JAB domain VIBHAR_00654 PF00830 Ribosomal L28 family VIBHAR_00655 PF00471 Ribosomal protein L33 VIBHAR_00657 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain VIBHAR_00657 PF06827 Zinc finger found in FPG and IleRS VIBHAR_00657 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain VIBHAR_00658 PF05686 Glycosyl transferase family 90 VIBHAR_00659 PF01467 Cytidylyltransferase-like VIBHAR_00660 PF13439 Glycosyltransferase Family 4 VIBHAR_00660 PF00534 Glycosyl transferases group 1 VIBHAR_00661 PF00535 Glycosyl transferase family 2 VIBHAR_00662 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VIBHAR_00663 PF01219 Prokaryotic diacylglycerol kinase VIBHAR_00667 PF02719 Polysaccharide biosynthesis protein VIBHAR_00668 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family VIBHAR_00670 PF08666 SAF domain VIBHAR_00670 PF03102 NeuB family VIBHAR_00671 PF02350 UDP-N-acetylglucosamine 2-epimerase VIBHAR_00675 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III VIBHAR_00675 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal VIBHAR_00676 PF00483 Nucleotidyl transferase VIBHAR_00677 PF02348 Cytidylyltransferase VIBHAR_00679 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) VIBHAR_00680 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VIBHAR_00681 PF03279 Bacterial lipid A biosynthesis acyltransferase VIBHAR_00682 PF01370 NAD dependent epimerase/dehydratase family VIBHAR_00683 PF06082 Exopolysaccharide biosynthesis protein YbjH VIBHAR_00687 PF02563 Polysaccharide biosynthesis/export protein VIBHAR_00687 PF10531 SLBB domain VIBHAR_00687 PF18412 Outer-membrane lipoprotein Wza C-terminal domain VIBHAR_00689 PF02350 UDP-N-acetylglucosamine 2-epimerase VIBHAR_00690 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain VIBHAR_00690 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain VIBHAR_00690 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain VIBHAR_00699 PF13333 Integrase core domain VIBHAR_00699 PF00665 Integrase core domain VIBHAR_00699 PF13276 HTH-like domain VIBHAR_00702 PF00483 Nucleotidyl transferase VIBHAR_00702 PF01050 Mannose-6-phosphate isomerase VIBHAR_00703 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VIBHAR_00703 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VIBHAR_00703 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VIBHAR_00703 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VIBHAR_00704 PF01238 Phosphomannose isomerase type I VIBHAR_00705 PF00953 Glycosyl transferase family 4 VIBHAR_00706 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain VIBHAR_00706 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain VIBHAR_00706 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain VIBHAR_00709 PF00121 Triosephosphate isomerase VIBHAR_00712 PF02371 Transposase IS116/IS110/IS902 family VIBHAR_00712 PF01548 Transposase VIBHAR_00716 PF08220 DeoR-like helix-turn-helix domain VIBHAR_00716 PF00455 DeoR C terminal sensor domain VIBHAR_00717 PF01548 Transposase VIBHAR_00717 PF02371 Transposase IS116/IS110/IS902 family VIBHAR_00718 PF01548 Transposase VIBHAR_00718 PF02371 Transposase IS116/IS110/IS902 family VIBHAR_00719 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded VIBHAR_00720 PF06005 Cell division protein ZapB VIBHAR_00721 PF03737 Aldolase/RraA VIBHAR_00722 PF01040 UbiA prenyltransferase family VIBHAR_00723 PF07724 AAA domain (Cdc48 subfamily) VIBHAR_00723 PF00004 ATPase family associated with various cellular activities (AAA) VIBHAR_00724 PF00227 Proteasome subunit VIBHAR_00726 PF00356 Bacterial regulatory proteins, lacI family VIBHAR_00727 PF00270 DEAD/DEAH box helicase VIBHAR_00727 PF00271 Helicase conserved C-terminal domain VIBHAR_00727 PF17764 3′ DNA-binding domain (3′BD) VIBHAR_00727 PF18074 Primosomal protein N C-terminal domain VIBHAR_00727 PF18319 PriA DNA helicase Cys-rich region (CRR) domain VIBHAR_00728 PF01197 Ribosomal protein L31 VIBHAR_00729 PF00338 Ribosomal protein S10p/S20e VIBHAR_00730 PF00297 Ribosomal protein L3 VIBHAR_00731 PF00573 Ribosomal protein L4/L1 family VIBHAR_00732 PF00276 Ribosomal protein L23 VIBHAR_00733 PF03947 Ribosomal Proteins L2, C-terminal domain VIBHAR_00733 PF00181 Ribosomal Proteins L2, RNA binding domain VIBHAR_00734 PF00203 Ribosomal protein S19 VIBHAR_00735 PF00237 Ribosomal protein L22p/L17e VIBHAR_00736 PF07650 KH domain VIBHAR_00736 PF00189 Ribosomal protein S3, C-terminal domain VIBHAR_00737 PF00252 Ribosomal protein L16p/L10e VIBHAR_00738 PF00831 Ribosomal L29 protein VIBHAR_00739 PF00366 Ribosomal protein S17 VIBHAR_00740 PF00238 Ribosomal protein L14p/L23e VIBHAR_00741 PF00467 KOW motif VIBHAR_00741 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 VIBHAR_00742 PF00673 ribosomal L5P family C-terminus VIBHAR_00742 PF00281 Ribosomal protein L5 VIBHAR_00743 PF00253 Ribosomal protein S14p/S29e VIBHAR_00744 PF00410 Ribosomal protein S8 VIBHAR_00745 PF00347 Ribosomal protein L6 VIBHAR_00746 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast VIBHAR_00747 PF00333 Ribosomal protein S5, N-terminal domain VIBHAR_00747 PF03719 Ribosomal protein S5, C-terminal domain VIBHAR_00748 PF00327 Ribosomal protein L30p/L7e VIBHAR_00749 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A VIBHAR_00750 PF00344 SecY translocase VIBHAR_00751 PF00444 Ribosomal protein L36 VIBHAR_00752 PF00411 Ribosomal protein S11 VIBHAR_00753 PF00163 Ribosomal protein S4/S9 N-terminal domain VIBHAR_00753 PF01479 S4 domain VIBHAR_00754 PF01000 RNA polymerase Rpb3/RpoA insert domain VIBHAR_00754 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain VIBHAR_00754 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain VIBHAR_00755 PF01196 Ribosomal protein L17 VIBHAR_00757 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VIBHAR_00757 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase VIBHAR_00759 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) VIBHAR_00761 PF13673 Acetyltransferase (GNAT) domain VIBHAR_00762 PF00270 DEAD/DEAH box helicase VIBHAR_00762 PF03880 DbpA RNA binding domain VIBHAR_00762 PF00271 Helicase conserved C-terminal domain VIBHAR_00764 PF00149 Calcineurin-like phosphoesterase VIBHAR_00764 PF02872 5'-nucleotidase, C-terminal domain VIBHAR_00765 PF14824 Sirohaem biosynthesis protein central VIBHAR_00765 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VIBHAR_00765 PF10414 Sirohaem synthase dimerisation region VIBHAR_00766 PF01507 Phosphoadenosine phosphosulfate reductase family VIBHAR_00767 PF00009 Elongation factor Tu GTP binding domain VIBHAR_00768 PF03600 Citrate transporter VIBHAR_00768 PF02080 TrkA-C domain VIBHAR_00773 PF00005 ABC transporter VIBHAR_00776 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) VIBHAR_00778 PF01625 Peptide methionine sulfoxide reductase VIBHAR_00779 PF17243 POTRA domain TamA domain 1 VIBHAR_00779 PF07244 Surface antigen variable number repeat VIBHAR_00779 PF01103 Surface antigen VIBHAR_00780 PF04357 TamB, inner membrane protein subunit of TAM complex VIBHAR_00781 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like VIBHAR_00783 PF13006 Insertion element 4 transposase N-terminal VIBHAR_00783 PF01609 Transposase DDE domain VIBHAR_00784 PF00719 Inorganic pyrophosphatase VIBHAR_00785 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain VIBHAR_00786 PF01225 Mur ligase family, catalytic domain VIBHAR_00786 PF02875 Mur ligase family, glutamate ligase domain VIBHAR_00786 PF08245 Mur ligase middle domain VIBHAR_00787 PF02441 Flavoprotein VIBHAR_00789 PF00528 Binding-protein-dependent transport system inner membrane component VIBHAR_00790 PF00005 ABC transporter VIBHAR_00793 PF16868 NMT1-like family VIBHAR_00794 PF01316 Arginine repressor, DNA binding domain VIBHAR_00794 PF02863 Arginine repressor, C-terminal domain VIBHAR_00795 PF00056 lactate/malate dehydrogenase, NAD binding domain VIBHAR_00795 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain VIBHAR_00797 PF01609 Transposase DDE domain VIBHAR_00797 PF13006 Insertion element 4 transposase N-terminal VIBHAR_00798 PF00348 Polyprenyl synthetase VIBHAR_00800 PF00829 Ribosomal prokaryotic L21 protein VIBHAR_00801 PF01016 Ribosomal L27 protein VIBHAR_00802 PF01926 50S ribosome-binding GTPase VIBHAR_00802 PF01018 GTP1/OBG VIBHAR_00803 PF06738 Putative threonine/serine exporter VIBHAR_00804 PF12821 Threonine/Serine exporter, ThrE VIBHAR_00805 PF00186 Dihydrofolate reductase VIBHAR_00806 PF00149 Calcineurin-like phosphoesterase VIBHAR_00807 PF04379 ApaG domain VIBHAR_00808 PF00398 Ribosomal RNA adenine dimethylase VIBHAR_00809 PF04166 Pyridoxal phosphate biosynthetic protein PdxA VIBHAR_00810 PF09312 SurA N-terminal domain VIBHAR_00811 PF03968 OstA-like protein VIBHAR_00811 PF04453 LPS transport system D VIBHAR_00812 PF00226 DnaJ domain VIBHAR_00812 PF05099 Tellurite resistance protein TerB VIBHAR_00814 PF00694 Aconitase C-terminal domain VIBHAR_00815 PF00330 Aconitase family (aconitate hydratase) VIBHAR_00816 PF00180 Isocitrate/isopropylmalate dehydrogenase VIBHAR_00817 PF00682 HMGL-like VIBHAR_00817 PF08502 LeuA allosteric (dimerisation) domain VIBHAR_00821 PF01569 PAP2 superfamily VIBHAR_00823 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBHAR_00823 PF03466 LysR substrate binding domain VIBHAR_00824 PF00501 AMP-binding enzyme VIBHAR_00825 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VIBHAR_00825 PF00205 Thiamine pyrophosphate enzyme, central domain VIBHAR_00825 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VIBHAR_00826 PF10369 Small subunit of acetolactate synthase VIBHAR_00827 PF00990 Diguanylate cyclase, GGDEF domain VIBHAR_00827 PF17158 Membrane-associated sensor, integral membrane domain VIBHAR_00829 PF00224 Pyruvate kinase, barrel domain VIBHAR_00829 PF02887 Pyruvate kinase, alpha/beta domain VIBHAR_00830 PF08220 DeoR-like helix-turn-helix domain VIBHAR_00830 PF00455 DeoR C terminal sensor domain VIBHAR_00831 PF01380 SIS domain VIBHAR_00832 PF05068 Mannitol repressor VIBHAR_00833 PF08125 Mannitol dehydrogenase C-terminal domain VIBHAR_00833 PF01232 Mannitol dehydrogenase Rossmann domain VIBHAR_00834 PF02378 Phosphotransferase system, EIIC VIBHAR_00834 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VIBHAR_00834 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VIBHAR_00839 PF14659 Phage integrase, N-terminal SAM-like domain VIBHAR_00839 PF13356 Arm DNA-binding domain VIBHAR_00839 PF00589 Phage integrase family VIBHAR_00844 PF13817 IS66 C-terminal element VIBHAR_00844 PF13007 Transposase C of IS166 homeodomain VIBHAR_00844 PF03050 Transposase IS66 family VIBHAR_00844 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_00848 PF04546 Sigma-70, non-essential region VIBHAR_00848 PF04542 Sigma-70 region 2 VIBHAR_00848 PF00140 Sigma-70 factor, region 1.2 VIBHAR_00848 PF03979 Sigma-70 factor, region 1.1 VIBHAR_00848 PF04539 Sigma-70 region 3 VIBHAR_00848 PF04545 Sigma-70, region 4 VIBHAR_00849 PF10410 DnaB-helicase binding domain of primase VIBHAR_00849 PF08275 DNA primase catalytic core, N-terminal domain VIBHAR_00849 PF08278 DNA primase DnaG DnaB-binding VIBHAR_00849 PF01807 CHC2 zinc finger VIBHAR_00850 PF09424 Yqey-like protein VIBHAR_00851 PF01165 Ribosomal protein S21 VIBHAR_00852 PF00814 Glycoprotease family VIBHAR_00853 PF00561 alpha/beta hydrolase fold VIBHAR_00854 PF02660 Glycerol-3-phosphate acyltransferase VIBHAR_00855 PF02152 Dihydroneopterin aldolase VIBHAR_00856 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) VIBHAR_00857 PF02673 Bacitracin resistance protein BacA VIBHAR_00858 PF01743 Poly A polymerase head domain VIBHAR_00858 PF12627 Probable RNA and SrmB- binding site of polymerase A VIBHAR_00858 PF01966 HD domain VIBHAR_00859 PF01471 Putative peptidoglycan binding domain VIBHAR_00859 PF13401 AAA domain VIBHAR_00861 PF08239 Bacterial SH3 domain VIBHAR_00862 PF01384 Phosphate transporter family VIBHAR_00863 PF01865 Protein of unknown function DUF47 VIBHAR_00864 PF01928 CYTH domain VIBHAR_00865 PF07885 Ion channel VIBHAR_00866 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBHAR_00866 PF02743 Cache domain VIBHAR_00866 PF00672 HAMP domain VIBHAR_00867 PF03710 Glutamate-ammonia ligase adenylyltransferase VIBHAR_00867 PF08335 GlnD PII-uridylyltransferase VIBHAR_00868 PF00294 pfkB family carbohydrate kinase VIBHAR_00868 PF01467 Cytidylyltransferase-like VIBHAR_00869 PF02321 Outer membrane efflux protein VIBHAR_00870 PF00293 NUDIX domain VIBHAR_00871 PF06853 Protein of unknown function (DUF1249) VIBHAR_00872 PF00149 Calcineurin-like phosphoesterase VIBHAR_00873 PF05728 Uncharacterised protein family (UPF0227) VIBHAR_00875 PF00204 DNA gyrase B VIBHAR_00875 PF01751 Toprim domain VIBHAR_00875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBHAR_00875 PF00986 DNA gyrase B subunit, carboxyl terminus VIBHAR_00876 PF00521 DNA gyrase/topoisomerase IV, subunit A VIBHAR_00876 PF03989 DNA gyrase C-terminal domain, beta-propeller VIBHAR_00877 PF13180 PDZ domain VIBHAR_00878 PF00595 PDZ domain VIBHAR_00879 PF06295 Protein of unknown function (DUF1043) VIBHAR_00880 PF03969 AFG1-like ATPase VIBHAR_00881 PF00572 Ribosomal protein L13 VIBHAR_00882 PF00380 Ribosomal protein S9/S16 VIBHAR_00883 PF00355 Rieske [2Fe-2S] domain VIBHAR_00883 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal VIBHAR_00884 PF00033 Cytochrome b/b6/petB VIBHAR_00884 PF00032 Cytochrome b(C-terminal)/b6/petD VIBHAR_00885 PF02167 Cytochrome C1 family VIBHAR_00886 PF02798 Glutathione S-transferase, N-terminal domain VIBHAR_00886 PF00043 Glutathione S-transferase, C-terminal domain VIBHAR_00887 PF04386 Stringent starvation protein B VIBHAR_00888 PF04972 BON domain VIBHAR_00889 PF13580 SIS domain VIBHAR_00890 PF02021 Uncharacterised protein family UPF0102 VIBHAR_00891 PF04348 LppC putative lipoprotein VIBHAR_00892 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VIBHAR_00894 PF01795 MraW methylase family VIBHAR_00895 PF04999 Cell division protein FtsL VIBHAR_00896 PF00905 Penicillin binding protein transpeptidase domain VIBHAR_00896 PF03717 Penicillin-binding Protein dimerisation domain VIBHAR_00897 PF02875 Mur ligase family, glutamate ligase domain VIBHAR_00897 PF08245 Mur ligase middle domain VIBHAR_00897 PF01225 Mur ligase family, catalytic domain VIBHAR_00898 PF02875 Mur ligase family, glutamate ligase domain VIBHAR_00898 PF08245 Mur ligase middle domain VIBHAR_00898 PF01225 Mur ligase family, catalytic domain VIBHAR_00899 PF00953 Glycosyl transferase family 4 VIBHAR_00899 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 VIBHAR_00900 PF08245 Mur ligase middle domain VIBHAR_00900 PF02875 Mur ligase family, glutamate ligase domain VIBHAR_00901 PF01098 Cell cycle protein VIBHAR_00902 PF03033 Glycosyltransferase family 28 N-terminal domain VIBHAR_00902 PF04101 Glycosyltransferase family 28 C-terminal domain VIBHAR_00903 PF08245 Mur ligase middle domain VIBHAR_00903 PF01225 Mur ligase family, catalytic domain VIBHAR_00903 PF02875 Mur ligase family, glutamate ligase domain VIBHAR_00904 PF08478 POTRA domain, FtsQ-type VIBHAR_00904 PF03799 Cell division protein FtsQ VIBHAR_00905 PF02491 SHS2 domain inserted in FTSA VIBHAR_00906 PF00091 Tubulin/FtsZ family, GTPase domain VIBHAR_00906 PF12327 FtsZ family, C-terminal domain VIBHAR_00907 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase VIBHAR_00909 PF07517 SecA DEAD-like domain VIBHAR_00909 PF02810 SEC-C motif VIBHAR_00909 PF07516 SecA Wing and Scaffold domain VIBHAR_00909 PF01043 SecA preprotein cross-linking domain VIBHAR_00910 PF00293 NUDIX domain VIBHAR_00911 PF01113 Dihydrodipicolinate reductase, N-terminus VIBHAR_00911 PF05173 Dihydrodipicolinate reductase, C-terminus VIBHAR_00912 PF00117 Glutamine amidotransferase class-I VIBHAR_00912 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain VIBHAR_00913 PF02142 MGS-like domain VIBHAR_00913 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain VIBHAR_00913 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VIBHAR_00918 PF01925 Sulfite exporter TauE/SafE VIBHAR_00919 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBHAR_00919 PF03466 LysR substrate binding domain VIBHAR_00920 PF03458 UPF0126 domain VIBHAR_00921 PF01497 Periplasmic binding protein VIBHAR_00923 PF01048 Phosphorylase superfamily VIBHAR_00925 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster VIBHAR_00925 PF07992 Pyridine nucleotide-disulphide oxidoreductase VIBHAR_00926 PF04898 Glutamate synthase central domain VIBHAR_00926 PF00310 Glutamine amidotransferases class-II VIBHAR_00926 PF01493 GXGXG motif VIBHAR_00926 PF01645 Conserved region in glutamate synthase VIBHAR_00927 PF07992 Pyridine nucleotide-disulphide oxidoreductase VIBHAR_00927 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster VIBHAR_00928 PF00310 Glutamine amidotransferases class-II VIBHAR_00928 PF04898 Glutamate synthase central domain VIBHAR_00928 PF01645 Conserved region in glutamate synthase VIBHAR_00928 PF01493 GXGXG motif VIBHAR_00929 PF04055 Radical SAM superfamily VIBHAR_00929 PF16199 Radical_SAM C-terminal domain VIBHAR_00930 PF00360 Phytochrome region VIBHAR_00930 PF01590 GAF domain VIBHAR_00930 PF00990 Diguanylate cyclase, GGDEF domain VIBHAR_00930 PF00563 EAL domain VIBHAR_00931 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBHAR_00931 PF00512 His Kinase A (phospho-acceptor) domain VIBHAR_00931 PF00072 Response regulator receiver domain VIBHAR_00931 PF18415 Histidine kinase receptor ArcB trans-membrane domain VIBHAR_00931 PF01627 Hpt domain VIBHAR_00931 PF00989 PAS fold VIBHAR_00933 PF00486 Transcriptional regulatory protein, C terminal VIBHAR_00933 PF00072 Response regulator receiver domain VIBHAR_00934 PF01609 Transposase DDE domain VIBHAR_00934 PF13006 Insertion element 4 transposase N-terminal VIBHAR_00936 PF03737 Aldolase/RraA VIBHAR_00939 PF00742 Homoserine dehydrogenase VIBHAR_00939 PF03447 Homoserine dehydrogenase, NAD binding domain VIBHAR_00939 PF13840 ACT domain VIBHAR_00939 PF01842 ACT domain VIBHAR_00939 PF00696 Amino acid kinase family VIBHAR_00940 PF00288 GHMP kinases N terminal domain VIBHAR_00940 PF08544 GHMP kinases C terminal VIBHAR_00941 PF14821 Threonine synthase N terminus VIBHAR_00941 PF00291 Pyridoxal-phosphate dependent enzyme VIBHAR_00943 PF01228 Glycine radical VIBHAR_00944 PF01261 Xylose isomerase-like TIM barrel VIBHAR_00945 PF03167 Uracil DNA glycosylase superfamily VIBHAR_00948 PF01235 Sodium:alanine symporter family VIBHAR_00949 PF03883 Peroxide stress protein YaaA VIBHAR_00950 PF14706 Transposase DNA-binding VIBHAR_00950 PF01609 Transposase DDE domain VIBHAR_00950 PF02281 Transposase Tn5 dimerisation domain VIBHAR_00952 PF00271 Helicase conserved C-terminal domain VIBHAR_00952 PF00270 DEAD/DEAH box helicase VIBHAR_00953 PF05175 Methyltransferase small domain VIBHAR_00954 PF05525 Branched-chain amino acid transport protein VIBHAR_00955 PF00258 Flavodoxin VIBHAR_00956 PF00589 Phage integrase family VIBHAR_00956 PF02899 Phage integrase, N-terminal SAM-like domain VIBHAR_00957 PF10411 Disulfide bond isomerase protein N-terminus VIBHAR_00957 PF13098 Thioredoxin-like domain VIBHAR_00958 PF02272 DHHA1 domain VIBHAR_00958 PF17768 RecJ OB domain VIBHAR_00958 PF01368 DHH family VIBHAR_00959 PF03462 PCRF domain VIBHAR_00959 PF00472 RF-1 domain VIBHAR_00960 PF01336 OB-fold nucleic acid binding domain VIBHAR_00960 PF00152 tRNA synthetases class II (D, K and N) VIBHAR_00961 PF00158 Sigma-54 interaction domain VIBHAR_00961 PF02954 Bacterial regulatory protein, Fis family VIBHAR_00961 PF00072 Response regulator receiver domain VIBHAR_00964 PF00248 Aldo/keto reductase family VIBHAR_00966 PF02976 DNA mismatch repair enzyme MutH VIBHAR_00967 PF00293 NUDIX domain VIBHAR_00968 PF00391 PEP-utilising enzyme, mobile domain VIBHAR_00968 PF05524 PEP-utilising enzyme, N-terminal VIBHAR_00968 PF01590 GAF domain VIBHAR_00968 PF02896 PEP-utilising enzyme, TIM barrel domain VIBHAR_00969 PF01925 Sulfite exporter TauE/SafE VIBHAR_00970 PF01790 Prolipoprotein diacylglyceryl transferase VIBHAR_00971 PF00303 Thymidylate synthase VIBHAR_00972 PF01548 Transposase VIBHAR_00972 PF02371 Transposase IS116/IS110/IS902 family VIBHAR_00974 PF02690 Na+/Pi-cotransporter VIBHAR_00975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBHAR_00975 PF03466 LysR substrate binding domain VIBHAR_00976 PF01022 Bacterial regulatory protein, arsR family VIBHAR_00977 PF01649 Ribosomal protein S20 VIBHAR_00978 PF03023 Lipid II flippase MurJ VIBHAR_00979 PF01687 Riboflavin kinase VIBHAR_00979 PF06574 FAD synthetase VIBHAR_00980 PF06827 Zinc finger found in FPG and IleRS VIBHAR_00980 PF00133 tRNA synthetases class I (I, L, M and V) VIBHAR_00980 PF08264 Anticodon-binding domain of tRNA VIBHAR_00981 PF01252 Signal peptidase (SPase) II VIBHAR_00982 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VIBHAR_00983 PF02401 LytB protein VIBHAR_00984 PF04397 LytTr DNA-binding domain VIBHAR_00984 PF00072 Response regulator receiver domain VIBHAR_00985 PF07694 5TMR of 5TMR-LYT VIBHAR_00985 PF06580 Histidine kinase VIBHAR_00986 PF02554 Carbon starvation protein CstA VIBHAR_00989 PF01380 SIS domain VIBHAR_00990 PF03702 Anhydro-N-acetylmuramic acid kinase VIBHAR_00991 PF00933 Glycosyl hydrolase family 3 N terminal domain VIBHAR_00992 PF00793 DAHP synthetase I family VIBHAR_00993 PF02153 Prephenate dehydrogenase VIBHAR_00993 PF01817 Chorismate mutase type II VIBHAR_00994 PF13006 Insertion element 4 transposase N-terminal VIBHAR_00994 PF01609 Transposase DDE domain VIBHAR_00995 PF01551 Peptidase family M23 VIBHAR_00995 PF04225 Opacity-associated protein A LysM-like domain VIBHAR_00996 PF07238 PilZ domain VIBHAR_00997 PF12848 ABC transporter VIBHAR_00997 PF00005 ABC transporter VIBHAR_00998 PF14718 Soluble lytic murein transglycosylase L domain VIBHAR_00998 PF01464 Transglycosylase SLT domain VIBHAR_00999 PF01371 Trp repressor protein VIBHAR_01000 PF01931 Protein of unknown function DUF84 VIBHAR_01001 PF00800 Prephenate dehydratase VIBHAR_01001 PF01817 Chorismate mutase type II VIBHAR_01002 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein VIBHAR_01003 PF01464 Transglycosylase SLT domain VIBHAR_01004 PF13525 Outer membrane lipoprotein VIBHAR_01005 PF01479 S4 domain VIBHAR_01005 PF00849 RNA pseudouridylate synthase VIBHAR_01007 PF07724 AAA domain (Cdc48 subfamily) VIBHAR_01007 PF17871 AAA lid domain VIBHAR_01007 PF02861 Clp amino terminal domain, pathogenicity island component VIBHAR_01007 PF10431 C-terminal, D2-small domain, of ClpB protein VIBHAR_01007 PF00004 ATPase family associated with various cellular activities (AAA) VIBHAR_01017 PF13358 DDE superfamily endonuclease VIBHAR_01020 PF03411 Penicillin-insensitive murein endopeptidase VIBHAR_01023 PF00037 4Fe-4S binding domain VIBHAR_01025 PF04381 Putative exonuclease, RdgC VIBHAR_01026 PF00072 Response regulator receiver domain VIBHAR_01026 PF00486 Transcriptional regulatory protein, C terminal VIBHAR_01027 PF11808 Phosphate regulon sensor protein PhoR VIBHAR_01027 PF00989 PAS fold VIBHAR_01027 PF00512 His Kinase A (phospho-acceptor) domain VIBHAR_01027 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBHAR_01028 PF12849 PBP superfamily domain VIBHAR_01029 PF02541 Ppx/GppA phosphatase family VIBHAR_01030 PF02503 Polyphosphate kinase middle domain VIBHAR_01030 PF13090 Polyphosphate kinase C-terminal domain 2 VIBHAR_01030 PF17941 Polyphosphate kinase C-terminal domain 1 VIBHAR_01030 PF13089 Polyphosphate kinase N-terminal domain VIBHAR_01031 PF00528 Binding-protein-dependent transport system inner membrane component VIBHAR_01032 PF00528 Binding-protein-dependent transport system inner membrane component VIBHAR_01033 PF00005 ABC transporter VIBHAR_01034 PF01895 PhoU domain VIBHAR_01036 PF13358 DDE superfamily endonuclease VIBHAR_01037 PF03976 Polyphosphate kinase 2 (PPK2) VIBHAR_01038 PF03932 CutC family VIBHAR_01039 PF00578 AhpC/TSA family VIBHAR_01039 PF10417 C-terminal domain of 1-Cys peroxiredoxin VIBHAR_01040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBHAR_01040 PF03466 LysR substrate binding domain VIBHAR_01041 PF01274 Malate synthase VIBHAR_01042 PF00463 Isocitrate lyase family VIBHAR_01043 PF00571 CBS domain VIBHAR_01045 PF02547 Queuosine biosynthesis protein VIBHAR_01046 PF01702 Queuine tRNA-ribosyltransferase VIBHAR_01047 PF02699 Preprotein translocase subunit VIBHAR_01048 PF07549 SecD/SecF GG Motif VIBHAR_01048 PF13721 SecD export protein N-terminal TM region VIBHAR_01048 PF02355 Protein export membrane protein VIBHAR_01049 PF07549 SecD/SecF GG Motif VIBHAR_01049 PF02355 Protein export membrane protein VIBHAR_01052 PF00459 Inositol monophosphatase family VIBHAR_01053 PF00588 SpoU rRNA Methylase family VIBHAR_01054 PF02082 Transcriptional regulator VIBHAR_01055 PF00266 Aminotransferase class-V VIBHAR_01056 PF01592 NifU-like N terminal domain VIBHAR_01057 PF01521 Iron-sulphur cluster biosynthesis VIBHAR_01058 PF00226 DnaJ domain VIBHAR_01058 PF07743 HSCB C-terminal oligomerisation domain VIBHAR_01059 PF00012 Hsp70 protein VIBHAR_01060 PF00111 2Fe-2S iron-sulfur cluster binding domain VIBHAR_01061 PF04384 Iron-sulphur cluster assembly VIBHAR_01062 PF01609 Transposase DDE domain VIBHAR_01062 PF13006 Insertion element 4 transposase N-terminal VIBHAR_01063 PF00883 Cytosol aminopeptidase family, catalytic domain VIBHAR_01063 PF12404 Peptidase VIBHAR_01064 PF00334 Nucleoside diphosphate kinase VIBHAR_01065 PF04055 Radical SAM superfamily VIBHAR_01066 PF13464 Domain of unknown function (DUF4115) VIBHAR_01067 PF04551 GcpE protein VIBHAR_01068 PF13393 Histidyl-tRNA synthetase VIBHAR_01068 PF03129 Anticodon binding domain VIBHAR_01069 PF09976 Tetratricopeptide repeat-like domain VIBHAR_01070 PF13360 PQQ-like domain VIBHAR_01071 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal VIBHAR_01071 PF01926 50S ribosome-binding GTPase VIBHAR_01075 PF13742 OB-fold nucleic acid binding domain VIBHAR_01075 PF02601 Exonuclease VII, large subunit VIBHAR_01076 PF00571 CBS domain VIBHAR_01076 PF00478 IMP dehydrogenase / GMP reductase domain VIBHAR_01077 PF02540 NAD synthase VIBHAR_01077 PF00958 GMP synthase C terminal domain VIBHAR_01077 PF00117 Glutamine amidotransferase class-I VIBHAR_01078 PF03553 Na+/H+ antiporter family VIBHAR_01079 PF01609 Transposase DDE domain VIBHAR_01079 PF13006 Insertion element 4 transposase N-terminal VIBHAR_01080 PF03553 Na+/H+ antiporter family VIBHAR_01081 PF06483 Chitinase C VIBHAR_01081 PF00704 Glycosyl hydrolases family 18 VIBHAR_01082 PF01184 GPR1/FUN34/yaaH family VIBHAR_01083 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) VIBHAR_01084 PF01235 Sodium:alanine symporter family VIBHAR_01086 PF03466 LysR substrate binding domain VIBHAR_01086 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBHAR_01087 PF03330 Lytic transglycolase VIBHAR_01087 PF05036 Sporulation related domain VIBHAR_01088 PF00924 Mechanosensitive ion channel VIBHAR_01089 PF13358 DDE superfamily endonuclease VIBHAR_01090 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) VIBHAR_01092 PF13333 Integrase core domain VIBHAR_01092 PF00665 Integrase core domain VIBHAR_01092 PF13276 HTH-like domain VIBHAR_01103 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_01103 PF13007 Transposase C of IS166 homeodomain VIBHAR_01103 PF03050 Transposase IS66 family VIBHAR_01103 PF13817 IS66 C-terminal element VIBHAR_01106 PF12805 FUSC-like inner membrane protein yccS VIBHAR_01107 PF03466 LysR substrate binding domain VIBHAR_01107 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBHAR_01115 PF02384 N-6 DNA Methylase VIBHAR_01115 PF12161 HsdM N-terminal domain VIBHAR_01118 PF13006 Insertion element 4 transposase N-terminal VIBHAR_01118 PF01609 Transposase DDE domain VIBHAR_01119 PF18766 SWI2/SNF2 ATPase VIBHAR_01119 PF12008 Type I restriction and modification enzyme - subunit R C terminal VIBHAR_01119 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) VIBHAR_01122 PF00589 Phage integrase family VIBHAR_01122 PF13356 Arm DNA-binding domain VIBHAR_01124 PF01668 SmpB protein VIBHAR_01125 PF03364 Polyketide cyclase / dehydrase and lipid transport VIBHAR_01126 PF03658 RnfH family Ubiquitin VIBHAR_01127 PF01609 Transposase DDE domain VIBHAR_01127 PF14706 Transposase DNA-binding VIBHAR_01127 PF02281 Transposase Tn5 dimerisation domain VIBHAR_01128 PF04355 SmpA / OmlA family VIBHAR_01129 PF00583 Acetyltransferase (GNAT) family VIBHAR_01130 PF02463 RecF/RecN/SMC N terminal domain VIBHAR_01131 PF01513 ATP-NAD kinase VIBHAR_01132 PF01025 GrpE VIBHAR_01133 PF00375 Sodium:dicarboxylate symporter family VIBHAR_01134 PF00012 Hsp70 protein VIBHAR_01135 PF00684 DnaJ central domain VIBHAR_01135 PF01556 DnaJ C terminal domain VIBHAR_01135 PF00226 DnaJ domain VIBHAR_01136 PF00114 Pilin (bacterial filament) VIBHAR_01136 PF07963 Prokaryotic N-terminal methylation motif VIBHAR_01141 PF03806 AbgT putative transporter family VIBHAR_01142 PF14437 MafB19-like deaminase VIBHAR_01146 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_01146 PF03050 Transposase IS66 family VIBHAR_01146 PF13817 IS66 C-terminal element VIBHAR_01146 PF13007 Transposase C of IS166 homeodomain VIBHAR_01148 PF13007 Transposase C of IS166 homeodomain VIBHAR_01148 PF03050 Transposase IS66 family VIBHAR_01148 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_01148 PF13817 IS66 C-terminal element VIBHAR_01149 PF00497 Bacterial extracellular solute-binding proteins, family 3 VIBHAR_01149 PF01464 Transglycosylase SLT domain VIBHAR_01150 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain VIBHAR_01150 PF02769 AIR synthase related protein, C-terminal domain VIBHAR_01150 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal VIBHAR_01152 PF13340 Putative transposase of IS4/5 family (DUF4096) VIBHAR_01156 PF01609 Transposase DDE domain VIBHAR_01156 PF13006 Insertion element 4 transposase N-terminal VIBHAR_01157 PF01546 Peptidase family M20/M25/M40 VIBHAR_01157 PF07687 Peptidase dimerisation domain VIBHAR_01158 PF00860 Permease family VIBHAR_01159 PF00156 Phosphoribosyl transferase domain VIBHAR_01161 PF07417 Sigma factor-binding transcriptional regulator Crl VIBHAR_01162 PF00696 Amino acid kinase family VIBHAR_01162 PF01472 PUA domain VIBHAR_01163 PF00171 Aldehyde dehydrogenase family VIBHAR_01165 PF03477 ATP cone domain VIBHAR_01166 PF01872 RibD C-terminal domain VIBHAR_01166 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VIBHAR_01167 PF00677 Lumazine binding domain VIBHAR_01168 PF00925 GTP cyclohydrolase II VIBHAR_01168 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase VIBHAR_01169 PF00885 6,7-dimethyl-8-ribityllumazine synthase VIBHAR_01170 PF01029 NusB family VIBHAR_01171 PF00586 AIR synthase related protein, N-terminal domain VIBHAR_01171 PF02769 AIR synthase related protein, C-terminal domain VIBHAR_01172 PF04608 Phosphatidylglycerophosphatase A VIBHAR_01173 PF13292 1-deoxy-D-xylulose-5-phosphate synthase VIBHAR_01173 PF02780 Transketolase, C-terminal domain VIBHAR_01173 PF02779 Transketolase, pyrimidine binding domain VIBHAR_01174 PF00348 Polyprenyl synthetase VIBHAR_01175 PF02609 Exonuclease VII small subunit VIBHAR_01176 PF01618 MotA/TolQ/ExbB proton channel family VIBHAR_01177 PF13677 Membrane MotB of proton-channel complex MotA/MotB VIBHAR_01177 PF00691 OmpA family VIBHAR_01178 PF02568 Thiamine biosynthesis protein (ThiI) VIBHAR_01178 PF02926 THUMP domain VIBHAR_01181 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_01181 PF13007 Transposase C of IS166 homeodomain VIBHAR_01181 PF13817 IS66 C-terminal element VIBHAR_01181 PF03050 Transposase IS66 family VIBHAR_01183 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBHAR_01183 PF03466 LysR substrate binding domain VIBHAR_01185 PF04241 Protein of unknown function (DUF423) VIBHAR_01186 PF18125 RlmM ferredoxin-like domain VIBHAR_01186 PF01728 FtsJ-like methyltransferase VIBHAR_01188 PF13340 Putative transposase of IS4/5 family (DUF4096) VIBHAR_01189 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain VIBHAR_01189 PF01367 5'-3' exonuclease, C-terminal SAM fold VIBHAR_01190 PF11892 Domain of unknown function (DUF3412) VIBHAR_01190 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases VIBHAR_01190 PF03641 Possible lysine decarboxylase VIBHAR_01191 PF00990 Diguanylate cyclase, GGDEF domain VIBHAR_01191 PF00072 Response regulator receiver domain VIBHAR_01193 PF14489 QueF-like protein VIBHAR_01193 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term VIBHAR_01194 PF07348 Syd protein (SUKH-2) VIBHAR_01195 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) VIBHAR_01196 PF00149 Calcineurin-like phosphoesterase VIBHAR_01196 PF02872 5'-nucleotidase, C-terminal domain VIBHAR_01200 PF03180 NLPA lipoprotein VIBHAR_01201 PF00528 Binding-protein-dependent transport system inner membrane component VIBHAR_01202 PF00005 ABC transporter VIBHAR_01202 PF09383 NIL domain VIBHAR_01204 PF00356 Bacterial regulatory proteins, lacI family VIBHAR_01205 PF00367 phosphotransferase system, EIIB VIBHAR_01205 PF02378 Phosphotransferase system, EIIC VIBHAR_01206 PF00128 Alpha amylase, catalytic domain VIBHAR_01206 PF16657 Maltogenic Amylase, C-terminal domain VIBHAR_01207 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) VIBHAR_01207 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 VIBHAR_01208 PF00464 Serine hydroxymethyltransferase VIBHAR_01209 PF01548 Transposase VIBHAR_01209 PF02371 Transposase IS116/IS110/IS902 family VIBHAR_01210 PF01548 Transposase VIBHAR_01210 PF02371 Transposase IS116/IS110/IS902 family VIBHAR_01211 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family VIBHAR_01211 PF04055 Radical SAM superfamily VIBHAR_01212 PF03099 Biotin/lipoate A/B protein ligase family VIBHAR_01213 PF04359 Protein of unknown function (DUF493) VIBHAR_01214 PF00768 D-alanyl-D-alanine carboxypeptidase VIBHAR_01214 PF07943 Penicillin-binding protein 5, C-terminal domain VIBHAR_01215 PF05036 Sporulation related domain VIBHAR_01215 PF03330 Lytic transglycolase VIBHAR_01216 PF01098 Cell cycle protein VIBHAR_01217 PF03717 Penicillin-binding Protein dimerisation domain VIBHAR_01217 PF00905 Penicillin binding protein transpeptidase domain VIBHAR_01218 PF02590 Predicted SPOUT methyltransferase VIBHAR_01220 PF06144 DNA polymerase III, delta subunit VIBHAR_01220 PF14840 Processivity clamp loader gamma complex DNA pol III C-term VIBHAR_01221 PF04390 Lipopolysaccharide-assembly VIBHAR_01222 PF08264 Anticodon-binding domain of tRNA VIBHAR_01222 PF00133 tRNA synthetases class I (I, L, M and V) VIBHAR_01222 PF13603 Leucyl-tRNA synthetase, Domain 2 VIBHAR_01223 PF07295 Zinc-ribbon containing domain VIBHAR_01226 PF00795 Carbon-nitrogen hydrolase VIBHAR_01227 PF03471 Transporter associated domain VIBHAR_01227 PF00571 CBS domain VIBHAR_01228 PF02130 Uncharacterized protein family UPF0054 VIBHAR_01229 PF02562 PhoH-like protein VIBHAR_01230 PF04055 Radical SAM superfamily VIBHAR_01230 PF01938 TRAM domain VIBHAR_01230 PF00919 Uncharacterized protein family UPF0004 VIBHAR_01232 PF01494 FAD binding domain VIBHAR_01244 PF01926 50S ribosome-binding GTPase VIBHAR_01244 PF06071 Protein of unknown function (DUF933) VIBHAR_01245 PF01195 Peptidyl-tRNA hydrolase VIBHAR_01246 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase VIBHAR_01246 PF14572 Phosphoribosyl synthetase-associated domain VIBHAR_01247 PF08544 GHMP kinases C terminal VIBHAR_01247 PF00288 GHMP kinases N terminal domain VIBHAR_01248 PF03550 Outer membrane lipoprotein LolB VIBHAR_01249 PF01488 Shikimate / quinate 5-dehydrogenase VIBHAR_01249 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain VIBHAR_01249 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain VIBHAR_01250 PF03462 PCRF domain VIBHAR_01250 PF00472 RF-1 domain VIBHAR_01251 PF13847 Methyltransferase domain VIBHAR_01251 PF17827 PrmC N-terminal domain VIBHAR_01252 PF04247 Invasion gene expression up-regulator, SirB VIBHAR_01253 PF13369 Transglutaminase-like superfamily VIBHAR_01254 PF00793 DAHP synthetase I family VIBHAR_01256 PF02872 5'-nucleotidase, C-terminal domain VIBHAR_01256 PF00149 Calcineurin-like phosphoesterase VIBHAR_01257 PF04073 Aminoacyl-tRNA editing domain VIBHAR_01258 PF01479 S4 domain VIBHAR_01258 PF00849 RNA pseudouridylate synthase VIBHAR_01259 PF01713 Smr domain VIBHAR_01265 PF02838 Glycosyl hydrolase family 20, domain 2 VIBHAR_01265 PF00728 Glycosyl hydrolase family 20, catalytic domain VIBHAR_01265 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain VIBHAR_01265 PF03173 Putative carbohydrate binding domain VIBHAR_01268 PF00403 Heavy-metal-associated domain VIBHAR_01269 PF13609 Gram-negative porin VIBHAR_01270 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) VIBHAR_01271 PF00749 tRNA synthetases class I (E and Q), catalytic domain VIBHAR_01273 PF00691 OmpA family VIBHAR_01273 PF01389 OmpA-like transmembrane domain VIBHAR_01282 PF01584 CheW-like domain VIBHAR_01282 PF00072 Response regulator receiver domain VIBHAR_01283 PF03705 CheR methyltransferase, all-alpha domain VIBHAR_01283 PF01739 CheR methyltransferase, SAM binding domain VIBHAR_01286 PF00460 Flagella basal body rod protein VIBHAR_01287 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VIBHAR_01287 PF00460 Flagella basal body rod protein VIBHAR_01288 PF13861 FlgD Tudor-like domain VIBHAR_01288 PF13860 FlgD Ig-like domain VIBHAR_01288 PF03963 Flagellar hook capping protein - N-terminal region VIBHAR_01289 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VIBHAR_01289 PF00460 Flagella basal body rod protein VIBHAR_01289 PF07559 Flagellar basal body protein FlaE VIBHAR_01291 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VIBHAR_01291 PF00460 Flagella basal body rod protein VIBHAR_01292 PF00460 Flagella basal body rod protein VIBHAR_01292 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VIBHAR_01293 PF02107 Flagellar L-ring protein VIBHAR_01294 PF02119 Flagellar P-ring protein VIBHAR_01295 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase VIBHAR_01295 PF10135 Rod binding protein VIBHAR_01296 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) VIBHAR_01297 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VIBHAR_01297 PF07196 Flagellin hook IN motif VIBHAR_01300 PF00700 Bacterial flagellin C-terminal helical region VIBHAR_01300 PF07196 Flagellin hook IN motif VIBHAR_01300 PF00669 Bacterial flagellin N-terminal helical region VIBHAR_01301 PF07196 Flagellin hook IN motif VIBHAR_01301 PF00700 Bacterial flagellin C-terminal helical region VIBHAR_01301 PF00669 Bacterial flagellin N-terminal helical region VIBHAR_01302 PF07196 Flagellin hook IN motif VIBHAR_01302 PF00700 Bacterial flagellin C-terminal helical region VIBHAR_01302 PF00669 Bacterial flagellin N-terminal helical region VIBHAR_01304 PF13358 DDE superfamily endonuclease VIBHAR_01305 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) VIBHAR_01306 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 VIBHAR_01307 PF02896 PEP-utilising enzyme, TIM barrel domain VIBHAR_01307 PF05524 PEP-utilising enzyme, N-terminal VIBHAR_01307 PF00391 PEP-utilising enzyme, mobile domain VIBHAR_01308 PF00381 PTS HPr component phosphorylation site VIBHAR_01309 PF00291 Pyridoxal-phosphate dependent enzyme VIBHAR_01311 PF04354 ZipA, C-terminal FtsZ-binding domain VIBHAR_01312 PF01653 NAD-dependent DNA ligase adenylation domain VIBHAR_01312 PF03120 NAD-dependent DNA ligase OB-fold domain VIBHAR_01312 PF03119 NAD-dependent DNA ligase C4 zinc finger domain VIBHAR_01312 PF12826 Helix-hairpin-helix motif VIBHAR_01312 PF00533 BRCA1 C Terminus (BRCT) domain VIBHAR_01317 PF16200 C-terminal region of band_7 VIBHAR_01317 PF01145 SPFH domain / Band 7 family VIBHAR_01318 PF00085 Thioredoxin VIBHAR_01319 PF00106 short chain dehydrogenase VIBHAR_01320 PF08338 Domain of unknown function (DUF1731) VIBHAR_01320 PF01370 NAD dependent epimerase/dehydratase family VIBHAR_01322 PF12850 Calcineurin-like phosphoesterase superfamily domain VIBHAR_01325 PF17323 Trans-membrane regulatory protein ToxS VIBHAR_01326 PF00486 Transcriptional regulatory protein, C terminal VIBHAR_01327 PF00183 Hsp90 protein VIBHAR_01327 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBHAR_01328 PF05191 Adenylate kinase, active site lid VIBHAR_01329 PF00762 Ferrochelatase VIBHAR_01330 PF00854 POT family VIBHAR_01332 PF13537 Glutamine amidotransferase domain VIBHAR_01332 PF00733 Asparagine synthase VIBHAR_01333 PF00999 Sodium/hydrogen exchanger family VIBHAR_01333 PF02254 TrkA-N domain VIBHAR_01334 PF00480 ROK family VIBHAR_01334 PF01047 MarR family VIBHAR_01335 PF01979 Amidohydrolase family VIBHAR_01336 PF02378 Phosphotransferase system, EIIC VIBHAR_01336 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 VIBHAR_01336 PF00367 phosphotransferase system, EIIB VIBHAR_01337 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain VIBHAR_01337 PF00749 tRNA synthetases class I (E and Q), catalytic domain VIBHAR_01338 PF07963 Prokaryotic N-terminal methylation motif VIBHAR_01338 PF08334 Type II secretion system (T2SS), protein G VIBHAR_01339 PF01475 Ferric uptake regulator family VIBHAR_01341 PF00258 Flavodoxin VIBHAR_01343 PF00561 alpha/beta hydrolase fold VIBHAR_01345 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VIBHAR_01345 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VIBHAR_01345 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VIBHAR_01345 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VIBHAR_01348 PF01784 NIF3 (NGG1p interacting factor 3) VIBHAR_01349 PF02371 Transposase IS116/IS110/IS902 family VIBHAR_01349 PF01548 Transposase VIBHAR_01350 PF00285 Citrate synthase, C-terminal domain VIBHAR_01351 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit VIBHAR_01352 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit VIBHAR_01353 PF02910 Fumarate reductase flavoprotein C-term VIBHAR_01353 PF00890 FAD binding domain VIBHAR_01354 PF13085 2Fe-2S iron-sulfur cluster binding domain VIBHAR_01355 PF16870 2-oxoglutarate dehydrogenase C-terminal VIBHAR_01355 PF16078 2-oxoglutarate dehydrogenase N-terminus VIBHAR_01355 PF02779 Transketolase, pyrimidine binding domain VIBHAR_01355 PF00676 Dehydrogenase E1 component VIBHAR_01356 PF02817 e3 binding domain VIBHAR_01356 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VIBHAR_01356 PF00364 Biotin-requiring enzyme VIBHAR_01357 PF08442 ATP-grasp domain VIBHAR_01357 PF00549 CoA-ligase VIBHAR_01358 PF02629 CoA binding domain VIBHAR_01358 PF00549 CoA-ligase VIBHAR_01359 PF00950 ABC 3 transport family VIBHAR_01360 PF00005 ABC transporter VIBHAR_01361 PF01297 Zinc-uptake complex component A periplasmic VIBHAR_01362 PF02311 AraC-like ligand binding domain VIBHAR_01362 PF12833 Helix-turn-helix domain VIBHAR_01363 PF04023 FeoA domain VIBHAR_01364 PF07670 Nucleoside recognition VIBHAR_01364 PF02421 Ferrous iron transport protein B VIBHAR_01364 PF17910 FeoB cytosolic helical domain VIBHAR_01364 PF07664 Ferrous iron transport protein B C terminus VIBHAR_01368 PF00750 tRNA synthetases class I (R) VIBHAR_01368 PF03485 Arginyl tRNA synthetase N terminal domain VIBHAR_01368 PF05746 DALR anticodon binding domain VIBHAR_01369 PF06185 YecM protein VIBHAR_01372 PF00089 Trypsin VIBHAR_01373 PF01842 ACT domain VIBHAR_01373 PF00551 Formyl transferase VIBHAR_01374 PF13307 Helicase C-terminal domain VIBHAR_01374 PF04851 Type III restriction enzyme, res subunit VIBHAR_01375 PF00814 Glycoprotease family VIBHAR_01377 PF03843 Outer membrane lipoprotein Slp family VIBHAR_01378 PF12697 Alpha/beta hydrolase family VIBHAR_01379 PF13193 AMP-binding enzyme C-terminal domain VIBHAR_01379 PF00501 AMP-binding enzyme VIBHAR_01380 PF01612 3'-5' exonuclease VIBHAR_01380 PF00570 HRDC domain VIBHAR_01381 PF02371 Transposase IS116/IS110/IS902 family VIBHAR_01381 PF01548 Transposase VIBHAR_01382 PF02371 Transposase IS116/IS110/IS902 family VIBHAR_01382 PF01548 Transposase VIBHAR_01383 PF03776 Septum formation topological specificity factor MinE VIBHAR_01384 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain VIBHAR_01386 PF05209 Septum formation inhibitor MinC, N-terminal domain VIBHAR_01386 PF03775 Septum formation inhibitor MinC, C-terminal domain VIBHAR_01387 PF05166 YcgL domain VIBHAR_01388 PF13406 Transglycosylase SLT domain VIBHAR_01389 PF03466 LysR substrate binding domain VIBHAR_01389 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBHAR_01390 PF07670 Nucleoside recognition VIBHAR_01390 PF07662 Na+ dependent nucleoside transporter C-terminus VIBHAR_01390 PF01773 Na+ dependent nucleoside transporter N-terminus VIBHAR_01391 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain VIBHAR_01391 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain VIBHAR_01398 PF00425 chorismate binding enzyme VIBHAR_01399 PF00501 AMP-binding enzyme VIBHAR_01399 PF13193 AMP-binding enzyme C-terminal domain VIBHAR_01400 PF00550 Phosphopantetheine attachment site VIBHAR_01400 PF00857 Isochorismatase family VIBHAR_01401 PF00501 AMP-binding enzyme VIBHAR_01401 PF00550 Phosphopantetheine attachment site VIBHAR_01401 PF13193 AMP-binding enzyme C-terminal domain VIBHAR_01401 PF00668 Condensation domain VIBHAR_01401 PF00975 Thioesterase domain VIBHAR_01401 PF00668 Condensation domain VIBHAR_01401 PF00975 Thioesterase domain VIBHAR_01401 PF00501 AMP-binding enzyme VIBHAR_01401 PF00550 Phosphopantetheine attachment site VIBHAR_01401 PF13193 AMP-binding enzyme C-terminal domain VIBHAR_01403 PF01648 4'-phosphopantetheinyl transferase superfamily VIBHAR_01403 PF17837 4'-phosphopantetheinyl transferase N-terminal domain VIBHAR_01404 PF07715 TonB-dependent Receptor Plug Domain VIBHAR_01404 PF00593 TonB dependent receptor VIBHAR_01406 PF00271 Helicase conserved C-terminal domain VIBHAR_01406 PF00270 DEAD/DEAH box helicase VIBHAR_01407 PF02080 TrkA-C domain VIBHAR_01407 PF02254 TrkA-N domain VIBHAR_01408 PF02386 Cation transport protein VIBHAR_01411 PF02696 Uncharacterized ACR, YdiU/UPF0061 family VIBHAR_01412 PF03480 Bacterial extracellular solute-binding protein, family 7 VIBHAR_01413 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VIBHAR_01416 PF05698 Bacterial trigger factor protein (TF) C-terminus VIBHAR_01416 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VIBHAR_01416 PF05697 Bacterial trigger factor protein (TF) VIBHAR_01417 PF00574 Clp protease VIBHAR_01418 PF06689 ClpX C4-type zinc finger VIBHAR_01418 PF07724 AAA domain (Cdc48 subfamily) VIBHAR_01418 PF10431 C-terminal, D2-small domain, of ClpB protein VIBHAR_01419 PF05362 Lon protease (S16) C-terminal proteolytic domain VIBHAR_01419 PF02190 ATP-dependent protease La (LON) substrate-binding domain VIBHAR_01419 PF00004 ATPase family associated with various cellular activities (AAA) VIBHAR_01420 PF00216 Bacterial DNA-binding protein VIBHAR_01421 PF13145 PPIC-type PPIASE domain VIBHAR_01425 PF13286 Phosphohydrolase-associated domain VIBHAR_01425 PF01966 HD domain VIBHAR_01427 PF00155 Aminotransferase class I and II VIBHAR_01428 PF00425 chorismate binding enzyme VIBHAR_01429 PF16582 Middle domain of thiamine pyrophosphate VIBHAR_01429 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VIBHAR_01429 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VIBHAR_01430 PF12697 Alpha/beta hydrolase family VIBHAR_01431 PF00378 Enoyl-CoA hydratase/isomerase VIBHAR_01432 PF13378 Enolase C-terminal domain-like VIBHAR_01433 PF13193 AMP-binding enzyme C-terminal domain VIBHAR_01433 PF00501 AMP-binding enzyme VIBHAR_01436 PF03601 Conserved hypothetical protein 698 VIBHAR_01437 PF07690 Major Facilitator Superfamily VIBHAR_01444 PF00529 HlyD membrane-fusion protein of T1SS VIBHAR_01444 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VIBHAR_01445 PF00873 AcrB/AcrD/AcrF family VIBHAR_01448 PF00291 Pyridoxal-phosphate dependent enzyme VIBHAR_01449 PF01037 Lrp/AsnC ligand binding domain VIBHAR_01449 PF13404 AsnC-type helix-turn-helix domain VIBHAR_01451 PF09619 Type III secretion system lipoprotein chaperone (YscW) VIBHAR_01452 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain VIBHAR_01454 PF00990 Diguanylate cyclase, GGDEF domain VIBHAR_01454 PF08448 PAS fold VIBHAR_01461 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_01461 PF13007 Transposase C of IS166 homeodomain VIBHAR_01461 PF13817 IS66 C-terminal element VIBHAR_01461 PF03050 Transposase IS66 family VIBHAR_01467 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_01467 PF03050 Transposase IS66 family VIBHAR_01467 PF13817 IS66 C-terminal element VIBHAR_01467 PF13007 Transposase C of IS166 homeodomain VIBHAR_01475 PF02371 Transposase IS116/IS110/IS902 family VIBHAR_01475 PF01548 Transposase VIBHAR_01483 PF00581 Rhodanese-like domain VIBHAR_01484 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_01484 PF13007 Transposase C of IS166 homeodomain VIBHAR_01484 PF13817 IS66 C-terminal element VIBHAR_01484 PF03050 Transposase IS66 family VIBHAR_01487 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_01487 PF13007 Transposase C of IS166 homeodomain VIBHAR_01487 PF13817 IS66 C-terminal element VIBHAR_01487 PF03050 Transposase IS66 family VIBHAR_01488 PF03050 Transposase IS66 family VIBHAR_01488 PF13817 IS66 C-terminal element VIBHAR_01488 PF13007 Transposase C of IS166 homeodomain VIBHAR_01488 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_01492 PF13737 Transposase DDE domain VIBHAR_01493 PF13737 Transposase DDE domain VIBHAR_01494 PF06953 Arsenical resistance operon trans-acting repressor ArsD VIBHAR_01495 PF02374 Anion-transporting ATPase VIBHAR_01501 PF13737 Transposase DDE domain VIBHAR_01503 PF13333 Integrase core domain VIBHAR_01503 PF00665 Integrase core domain VIBHAR_01503 PF13276 HTH-like domain VIBHAR_01509 PF00588 SpoU rRNA Methylase family VIBHAR_01509 PF08032 RNA 2'-O ribose methyltransferase substrate binding VIBHAR_01510 PF00037 4Fe-4S binding domain VIBHAR_01510 PF11953 Domain of unknown function (DUF3470) VIBHAR_01513 PF00571 CBS domain VIBHAR_01513 PF00478 IMP dehydrogenase / GMP reductase domain VIBHAR_01514 PF01554 MatE VIBHAR_01515 PF00403 Heavy-metal-associated domain VIBHAR_01516 PF01048 Phosphorylase superfamily VIBHAR_01518 PF00672 HAMP domain VIBHAR_01518 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBHAR_01519 PF01230 HIT domain VIBHAR_01522 PF08139 Prokaryotic membrane lipoprotein lipid attachment site VIBHAR_01522 PF13036 Peptidoglycan-synthase activator LpoB VIBHAR_01524 PF05728 Uncharacterised protein family (UPF0227) VIBHAR_01525 PF07992 Pyridine nucleotide-disulphide oxidoreductase VIBHAR_01528 PF17757 UvrB interaction domain VIBHAR_01528 PF02559 CarD-like/TRCF domain VIBHAR_01528 PF00270 DEAD/DEAH box helicase VIBHAR_01528 PF00271 Helicase conserved C-terminal domain VIBHAR_01528 PF03461 TRCF domain VIBHAR_01530 PF02687 FtsX-like permease family VIBHAR_01530 PF12704 MacB-like periplasmic core domain VIBHAR_01531 PF00005 ABC transporter VIBHAR_01532 PF12704 MacB-like periplasmic core domain VIBHAR_01532 PF02687 FtsX-like permease family VIBHAR_01534 PF03772 Competence protein VIBHAR_01534 PF13567 Domain of unknown function (DUF4131) VIBHAR_01534 PF00753 Metallo-beta-lactamase superfamily VIBHAR_01535 PF00005 ABC transporter VIBHAR_01535 PF00664 ABC transporter transmembrane region VIBHAR_01536 PF02606 Tetraacyldisaccharide-1-P 4'-kinase VIBHAR_01537 PF03966 Trm112p-like protein VIBHAR_01538 PF02348 Cytidylyltransferase VIBHAR_01539 PF04293 SpoVR like protein VIBHAR_01540 PF04285 Protein of unknown function (DUF444) VIBHAR_01541 PF06798 PrkA serine protein kinase C-terminal domain VIBHAR_01541 PF08298 PrkA AAA domain VIBHAR_01542 PF03887 YfbU domain VIBHAR_01544 PF04055 Radical SAM superfamily VIBHAR_01546 PF01228 Glycine radical VIBHAR_01546 PF02901 Pyruvate formate lyase-like VIBHAR_01549 PF00005 ABC transporter VIBHAR_01550 PF00497 Bacterial extracellular solute-binding proteins, family 3 VIBHAR_01551 PF00528 Binding-protein-dependent transport system inner membrane component VIBHAR_01552 PF00528 Binding-protein-dependent transport system inner membrane component VIBHAR_01553 PF03372 Endonuclease/Exonuclease/phosphatase family VIBHAR_01554 PF10689 Protein of unknown function (DUF2496) VIBHAR_01555 PF07445 Primosomal replication protein priC VIBHAR_01556 PF01925 Sulfite exporter TauE/SafE VIBHAR_01557 PF06733 DEAD_2 VIBHAR_01557 PF13307 Helicase C-terminal domain VIBHAR_01559 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) VIBHAR_01560 PF00849 RNA pseudouridylate synthase VIBHAR_01563 PF03971 Monomeric isocitrate dehydrogenase VIBHAR_01564 PF00313 'Cold-shock' DNA-binding domain VIBHAR_01566 PF02617 ATP-dependent Clp protease adaptor protein ClpS VIBHAR_01567 PF02861 Clp amino terminal domain, pathogenicity island component VIBHAR_01567 PF10431 C-terminal, D2-small domain, of ClpB protein VIBHAR_01567 PF07724 AAA domain (Cdc48 subfamily) VIBHAR_01567 PF00004 ATPase family associated with various cellular activities (AAA) VIBHAR_01567 PF17871 AAA lid domain VIBHAR_01568 PF01176 Translation initiation factor 1A / IF-1 VIBHAR_01569 PF04377 Arginine-tRNA-protein transferase, C terminus VIBHAR_01569 PF04376 Arginine-tRNA-protein transferase, N terminus VIBHAR_01570 PF03588 Leucyl/phenylalanyl-tRNA protein transferase VIBHAR_01572 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) VIBHAR_01573 PF10692 Protein of unknown function (DUF2498) VIBHAR_01574 PF01131 DNA topoisomerase VIBHAR_01574 PF01396 Topoisomerase DNA binding C4 zinc finger VIBHAR_01574 PF08272 Topoisomerase I zinc-ribbon-like VIBHAR_01574 PF01751 Toprim domain VIBHAR_01575 PF00483 Nucleotidyl transferase VIBHAR_01576 PF00534 Glycosyl transferases group 1 VIBHAR_01576 PF08323 Starch synthase catalytic domain VIBHAR_01580 PF04993 TfoX N-terminal domain VIBHAR_01580 PF04994 TfoX C-terminal domain VIBHAR_01581 PF00356 Bacterial regulatory proteins, lacI family VIBHAR_01582 PF02613 Nitrate reductase delta subunit VIBHAR_01583 PF00486 Transcriptional regulatory protein, C terminal VIBHAR_01583 PF00072 Response regulator receiver domain VIBHAR_01584 PF01609 Transposase DDE domain VIBHAR_01584 PF13006 Insertion element 4 transposase N-terminal VIBHAR_01585 PF02698 DUF218 domain VIBHAR_01587 PF03882 MukF winged-helix domain VIBHAR_01587 PF17192 MukF middle domain VIBHAR_01587 PF17193 MukF C-terminal domain VIBHAR_01588 PF04288 MukE-like family VIBHAR_01589 PF16330 MukB hinge domain VIBHAR_01589 PF04310 MukB N-terminal VIBHAR_01593 PF18030 RimK PreATP-grasp domain VIBHAR_01593 PF08443 RimK-like ATP-grasp domain VIBHAR_01594 PF08003 Protein of unknown function (DUF1698) VIBHAR_01595 PF13649 Methyltransferase domain VIBHAR_01596 PF01904 Protein of unknown function DUF72 VIBHAR_01597 PF01336 OB-fold nucleic acid binding domain VIBHAR_01597 PF00152 tRNA synthetases class II (D, K and N) VIBHAR_01597 PF02938 GAD domain VIBHAR_01598 PF02075 Crossover junction endodeoxyribonuclease RuvC VIBHAR_01599 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBHAR_01599 PF00672 HAMP domain VIBHAR_01599 PF02203 Tar ligand binding domain homologue VIBHAR_01600 PF07499 RuvA, C-terminal domain VIBHAR_01600 PF01330 RuvA N terminal domain VIBHAR_01601 PF05496 Holliday junction DNA helicase RuvB P-loop domain VIBHAR_01601 PF05491 RuvB C-terminal winged helix domain VIBHAR_01601 PF17864 RuvB AAA lid domain VIBHAR_01602 PF01654 Cytochrome bd terminal oxidase subunit I VIBHAR_01603 PF02322 Cytochrome bd terminal oxidase subunit II VIBHAR_01604 PF08173 Membrane bound YbgT-like protein VIBHAR_01606 PF03061 Thioesterase superfamily VIBHAR_01607 PF01618 MotA/TolQ/ExbB proton channel family VIBHAR_01608 PF02472 Biopolymer transport protein ExbD/TolR VIBHAR_01610 PF04052 TolB amino-terminal domain VIBHAR_01610 PF07676 WD40-like Beta Propeller Repeat VIBHAR_01611 PF00691 OmpA family VIBHAR_01613 PF16331 TolA binding protein trimerisation VIBHAR_01613 PF13174 Tetratricopeptide repeat VIBHAR_01614 PF02445 Quinolinate synthetase A protein VIBHAR_01616 PF03994 Domain of Unknown Function (DUF350) VIBHAR_01618 PF03738 Glutathionylspermidine synthase preATP-grasp VIBHAR_01620 PF09308 LuxQ, periplasmic VIBHAR_01620 PF00512 His Kinase A (phospho-acceptor) domain VIBHAR_01620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBHAR_01620 PF00072 Response regulator receiver domain VIBHAR_01621 PF06610 L-alanine exporter VIBHAR_01623 PF00589 Phage integrase family VIBHAR_01623 PF14659 Phage integrase, N-terminal SAM-like domain VIBHAR_01623 PF13356 Arm DNA-binding domain VIBHAR_01626 PF03050 Transposase IS66 family VIBHAR_01626 PF13817 IS66 C-terminal element VIBHAR_01626 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_01626 PF13007 Transposase C of IS166 homeodomain VIBHAR_01631 PF02803 Thiolase, C-terminal domain VIBHAR_01631 PF00108 Thiolase, N-terminal domain VIBHAR_01632 PF01515 Phosphate acetyl/butaryl transferase VIBHAR_01633 PF00871 Acetokinase family VIBHAR_01634 PF06314 Acetoacetate decarboxylase (ADC) VIBHAR_01635 PF16177 Acetyl-coenzyme A synthetase N-terminus VIBHAR_01635 PF13193 AMP-binding enzyme C-terminal domain VIBHAR_01635 PF00501 AMP-binding enzyme VIBHAR_01645 PF13358 DDE superfamily endonuclease VIBHAR_01646 PF03050 Transposase IS66 family VIBHAR_01646 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_01646 PF13007 Transposase C of IS166 homeodomain VIBHAR_01646 PF13817 IS66 C-terminal element VIBHAR_01658 PF13817 IS66 C-terminal element VIBHAR_01658 PF03050 Transposase IS66 family VIBHAR_01658 PF13007 Transposase C of IS166 homeodomain VIBHAR_01658 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_01662 PF13358 DDE superfamily endonuclease VIBHAR_01663 PF13737 Transposase DDE domain VIBHAR_01665 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 VIBHAR_01665 PF13542 Helix-turn-helix domain of transposase family ISL3 VIBHAR_01665 PF01610 Transposase VIBHAR_01666 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 VIBHAR_01666 PF13542 Helix-turn-helix domain of transposase family ISL3 VIBHAR_01666 PF01610 Transposase VIBHAR_01668 PF13333 Integrase core domain VIBHAR_01668 PF00665 Integrase core domain VIBHAR_01668 PF13276 HTH-like domain VIBHAR_01670 PF13808 DDE_Tnp_1-associated VIBHAR_01670 PF01609 Transposase DDE domain VIBHAR_01672 PF13737 Transposase DDE domain VIBHAR_01676 PF01527 Transposase VIBHAR_01677 PF00665 Integrase core domain VIBHAR_01686 PF01609 Transposase DDE domain VIBHAR_01686 PF13006 Insertion element 4 transposase N-terminal VIBHAR_01697 PF12833 Helix-turn-helix domain VIBHAR_01703 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF VIBHAR_01706 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI VIBHAR_01707 PF01514 Secretory protein of YscJ/FliF family VIBHAR_01709 PF02108 Flagellar assembly protein FliH VIBHAR_01713 PF02661 Fic/DOC family VIBHAR_01714 PF13358 DDE superfamily endonuclease VIBHAR_01716 PF13358 DDE superfamily endonuclease VIBHAR_01719 PF13358 DDE superfamily endonuclease VIBHAR_01722 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBHAR_01722 PF03466 LysR substrate binding domain VIBHAR_01723 PF01312 FlhB HrpN YscU SpaS Family VIBHAR_01724 PF01311 Bacterial export proteins, family 1 VIBHAR_01725 PF01313 Bacterial export proteins, family 3 VIBHAR_01726 PF00813 FliP family VIBHAR_01727 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term VIBHAR_01730 PF18269 T3SS EscN ATPase C-terminal domain VIBHAR_01730 PF02874 ATP synthase alpha/beta family, beta-barrel domain VIBHAR_01730 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VIBHAR_01731 PF07201 HrpJ-like domain VIBHAR_01732 PF09059 TyeA VIBHAR_01736 PF00771 FHIPEP family VIBHAR_01737 PF09621 Type III secretion system regulator (LcrR) VIBHAR_01739 PF04792 V antigen (LcrV) protein VIBHAR_01740 PF07720 Tetratricopeptide repeat VIBHAR_01742 PF05844 YopD protein VIBHAR_01746 PF01609 Transposase DDE domain VIBHAR_01746 PF13006 Insertion element 4 transposase N-terminal VIBHAR_01751 PF08274 PhnA Zinc-Ribbon VIBHAR_01751 PF03831 PhnA domain VIBHAR_01753 PF02743 Cache domain VIBHAR_01753 PF00672 HAMP domain VIBHAR_01753 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBHAR_01755 PF00529 HlyD membrane-fusion protein of T1SS VIBHAR_01755 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VIBHAR_01756 PF00873 AcrB/AcrD/AcrF family VIBHAR_01758 PF00392 Bacterial regulatory proteins, gntR family VIBHAR_01758 PF07729 FCD domain VIBHAR_01759 PF07687 Peptidase dimerisation domain VIBHAR_01759 PF01546 Peptidase family M20/M25/M40 VIBHAR_01760 PF03606 C4-dicarboxylate anaerobic carrier VIBHAR_01762 PF00593 TonB dependent receptor VIBHAR_01762 PF07715 TonB-dependent Receptor Plug Domain VIBHAR_01764 PF01032 FecCD transport family VIBHAR_01765 PF01032 FecCD transport family VIBHAR_01766 PF00005 ABC transporter VIBHAR_01770 PF13340 Putative transposase of IS4/5 family (DUF4096) VIBHAR_01772 PF00497 Bacterial extracellular solute-binding proteins, family 3 VIBHAR_01772 PF01464 Transglycosylase SLT domain VIBHAR_01773 PF00141 Peroxidase VIBHAR_01774 PF00579 tRNA synthetases class I (W and Y) VIBHAR_01775 PF02371 Transposase IS116/IS110/IS902 family VIBHAR_01775 PF01548 Transposase VIBHAR_01777 PF03372 Endonuclease/Exonuclease/phosphatase family VIBHAR_01778 PF00145 C-5 cytosine-specific DNA methylase VIBHAR_01783 PF03050 Transposase IS66 family VIBHAR_01783 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_01783 PF13007 Transposase C of IS166 homeodomain VIBHAR_01783 PF13817 IS66 C-terminal element VIBHAR_01786 PF01752 Collagenase VIBHAR_01786 PF08453 Peptidase family M9 N-terminal VIBHAR_01786 PF04151 Bacterial pre-peptidase C-terminal domain VIBHAR_01787 PF01979 Amidohydrolase family VIBHAR_01790 PF01548 Transposase VIBHAR_01790 PF02371 Transposase IS116/IS110/IS902 family VIBHAR_01791 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) VIBHAR_01793 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBHAR_01793 PF03466 LysR substrate binding domain VIBHAR_01795 PF05222 Alanine dehydrogenase/PNT, N-terminal domain VIBHAR_01795 PF01262 Alanine dehydrogenase/PNT, C-terminal domain VIBHAR_01796 PF01037 Lrp/AsnC ligand binding domain VIBHAR_01797 PF01580 FtsK/SpoIIIE family VIBHAR_01797 PF09397 Ftsk gamma domain VIBHAR_01797 PF13491 4TM region of DNA translocase FtsK/SpoIIIE VIBHAR_01797 PF17854 FtsK alpha domain VIBHAR_01798 PF03548 Outer membrane lipoprotein carrier protein LolA VIBHAR_01799 PF00004 ATPase family associated with various cellular activities (AAA) VIBHAR_01799 PF12002 MgsA AAA+ ATPase C terminal VIBHAR_01799 PF16193 AAA C-terminal domain VIBHAR_01800 PF02403 Seryl-tRNA synthetase N-terminal domain VIBHAR_01800 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VIBHAR_01801 PF13358 DDE superfamily endonuclease VIBHAR_01805 PF01258 Prokaryotic dksA/traR C4-type zinc finger VIBHAR_01807 PF06968 Biotin and Thiamin Synthesis associated domain VIBHAR_01807 PF04055 Radical SAM superfamily VIBHAR_01808 PF00155 Aminotransferase class I and II VIBHAR_01809 PF08241 Methyltransferase domain VIBHAR_01811 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) VIBHAR_01813 PF01435 Peptidase family M48 VIBHAR_01815 PF00106 short chain dehydrogenase VIBHAR_01822 PF00206 Lyase VIBHAR_01822 PF08328 Adenylosuccinate lyase C-terminal VIBHAR_01823 PF04356 Protein of unknown function (DUF489) VIBHAR_01826 PF00294 pfkB family carbohydrate kinase VIBHAR_01827 PF00816 H-NS histone family VIBHAR_01828 PF03553 Na+/H+ antiporter family VIBHAR_01830 PF01634 ATP phosphoribosyltransferase VIBHAR_01830 PF08029 HisG, C-terminal domain VIBHAR_01831 PF00815 Histidinol dehydrogenase VIBHAR_01832 PF00155 Aminotransferase class I and II VIBHAR_01833 PF00475 Imidazoleglycerol-phosphate dehydratase VIBHAR_01833 PF08645 Polynucleotide kinase 3 phosphatase VIBHAR_01834 PF00117 Glutamine amidotransferase class-I VIBHAR_01835 PF00977 Histidine biosynthesis protein VIBHAR_01836 PF00977 Histidine biosynthesis protein VIBHAR_01837 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase VIBHAR_01837 PF01502 Phosphoribosyl-AMP cyclohydrolase VIBHAR_01838 PF02810 SEC-C motif VIBHAR_01840 PF00149 Calcineurin-like phosphoesterase VIBHAR_01841 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD VIBHAR_01842 PF01406 tRNA synthetases class I (C) catalytic domain VIBHAR_01842 PF09190 DALR domain VIBHAR_01843 PF00265 Thymidine kinase VIBHAR_01846 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) VIBHAR_01847 PF02698 DUF218 domain VIBHAR_01852 PF01226 Formate/nitrite transporter VIBHAR_01854 PF03649 Uncharacterised protein family (UPF0014) VIBHAR_01855 PF06796 Periplasmic nitrate reductase protein NapE VIBHAR_01857 PF00384 Molybdopterin oxidoreductase VIBHAR_01857 PF01568 Molydopterin dinucleotide binding domain VIBHAR_01857 PF18364 Molybdopterin oxidoreductase N-terminal domain VIBHAR_01858 PF16875 Glycosyl hydrolase family 36 N-terminal domain VIBHAR_01858 PF16874 Glycosyl hydrolase family 36 C-terminal domain VIBHAR_01860 PF01368 DHH family VIBHAR_01860 PF02833 DHHA2 domain VIBHAR_01864 PF13333 Integrase core domain VIBHAR_01864 PF13276 HTH-like domain VIBHAR_01864 PF00665 Integrase core domain VIBHAR_01865 PF14706 Transposase DNA-binding VIBHAR_01865 PF02281 Transposase Tn5 dimerisation domain VIBHAR_01865 PF01609 Transposase DDE domain VIBHAR_01866 PF00005 ABC transporter VIBHAR_01867 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VIBHAR_01867 PF00005 ABC transporter VIBHAR_01868 PF00528 Binding-protein-dependent transport system inner membrane component VIBHAR_01868 PF12911 N-terminal TM domain of oligopeptide transport permease C VIBHAR_01869 PF00528 Binding-protein-dependent transport system inner membrane component VIBHAR_01870 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VIBHAR_01871 PF00158 Sigma-54 interaction domain VIBHAR_01871 PF02954 Bacterial regulatory protein, Fis family VIBHAR_01872 PF04012 PspA/IM30 family VIBHAR_01873 PF06667 Phage shock protein B VIBHAR_01874 PF04024 PspC domain VIBHAR_01875 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VIBHAR_01876 PF13533 Biotin-lipoyl like VIBHAR_01877 PF00873 AcrB/AcrD/AcrF family VIBHAR_01878 PF03352 Methyladenine glycosylase VIBHAR_01880 PF13358 DDE superfamily endonuclease VIBHAR_01882 PF01047 MarR family VIBHAR_01883 PF02028 BCCT, betaine/carnitine/choline family transporter VIBHAR_01884 PF00672 HAMP domain VIBHAR_01884 PF02743 Cache domain VIBHAR_01884 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBHAR_01890 PF00155 Aminotransferase class I and II VIBHAR_01891 PF00672 HAMP domain VIBHAR_01891 PF01966 HD domain VIBHAR_01894 PF00392 Bacterial regulatory proteins, gntR family VIBHAR_01894 PF00155 Aminotransferase class I and II VIBHAR_01897 PF01336 OB-fold nucleic acid binding domain VIBHAR_01897 PF00152 tRNA synthetases class II (D, K and N) VIBHAR_01900 PF01242 6-pyruvoyl tetrahydropterin synthase VIBHAR_01901 PF00072 Response regulator receiver domain VIBHAR_01901 PF00196 Bacterial regulatory proteins, luxR family VIBHAR_01904 PF00563 EAL domain VIBHAR_01904 PF00990 Diguanylate cyclase, GGDEF domain VIBHAR_01904 PF03707 Bacterial signalling protein N terminal repeat VIBHAR_01905 PF13006 Insertion element 4 transposase N-terminal VIBHAR_01905 PF01609 Transposase DDE domain VIBHAR_01907 PF13006 Insertion element 4 transposase N-terminal VIBHAR_01907 PF01609 Transposase DDE domain VIBHAR_01908 PF03315 Serine dehydratase beta chain VIBHAR_01908 PF03313 Serine dehydratase alpha chain VIBHAR_01909 PF03222 Tryptophan/tyrosine permease family VIBHAR_01910 PF00293 NUDIX domain VIBHAR_01913 PF00512 His Kinase A (phospho-acceptor) domain VIBHAR_01913 PF09308 LuxQ, periplasmic VIBHAR_01913 PF00072 Response regulator receiver domain VIBHAR_01913 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBHAR_01914 PF00425 chorismate binding enzyme VIBHAR_01914 PF04715 Anthranilate synthase component I, N terminal region VIBHAR_01917 PF04317 YcjX-like family, DUF463 VIBHAR_01918 PF05128 Domain of unknown function (DUF697) VIBHAR_01919 PF18024 Helix-turn-helix domain VIBHAR_01919 PF00158 Sigma-54 interaction domain VIBHAR_01920 PF13302 Acetyltransferase (GNAT) domain VIBHAR_01930 PF13007 Transposase C of IS166 homeodomain VIBHAR_01930 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_01930 PF03050 Transposase IS66 family VIBHAR_01930 PF13817 IS66 C-terminal element VIBHAR_01935 PF00665 Integrase core domain VIBHAR_01936 PF01695 IstB-like ATP binding protein VIBHAR_01937 PF03050 Transposase IS66 family VIBHAR_01937 PF13817 IS66 C-terminal element VIBHAR_01937 PF13007 Transposase C of IS166 homeodomain VIBHAR_01937 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_01941 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_01941 PF03050 Transposase IS66 family VIBHAR_01941 PF13007 Transposase C of IS166 homeodomain VIBHAR_01941 PF13817 IS66 C-terminal element VIBHAR_01946 PF13333 Integrase core domain VIBHAR_01946 PF13276 HTH-like domain VIBHAR_01946 PF00665 Integrase core domain VIBHAR_01948 PF00589 Phage integrase family VIBHAR_01948 PF12167 Arm DNA-binding domain VIBHAR_01951 PF10065 Uncharacterized conserved protein (DUF2303) VIBHAR_01954 PF01381 Helix-turn-helix VIBHAR_01954 PF00717 Peptidase S24-like VIBHAR_01955 PF01381 Helix-turn-helix VIBHAR_01960 PF03354 Phage Terminase VIBHAR_01963 PF06147 Protein of unknown function (DUF968) VIBHAR_01965 PF04717 Type VI secretion system, phage-baseplate injector VIBHAR_01975 PF00959 Phage lysozyme VIBHAR_01981 PF01972 Serine dehydrogenase proteinase VIBHAR_01981 PF01957 NfeD-like C-terminal, partner-binding VIBHAR_01983 PF03864 Phage major capsid protein E VIBHAR_02003 PF00589 Phage integrase family VIBHAR_02003 PF13495 Phage integrase, N-terminal SAM-like domain VIBHAR_02012 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) VIBHAR_02018 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_02018 PF03050 Transposase IS66 family VIBHAR_02018 PF13817 IS66 C-terminal element VIBHAR_02018 PF13007 Transposase C of IS166 homeodomain VIBHAR_02022 PF13358 DDE superfamily endonuclease VIBHAR_02025 PF13007 Transposase C of IS166 homeodomain VIBHAR_02025 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_02025 PF03050 Transposase IS66 family VIBHAR_02025 PF13817 IS66 C-terminal element VIBHAR_02026 PF13358 DDE superfamily endonuclease VIBHAR_02028 PF00266 Aminotransferase class-V VIBHAR_02031 PF00990 Diguanylate cyclase, GGDEF domain VIBHAR_02031 PF00072 Response regulator receiver domain VIBHAR_02032 PF00939 Sodium:sulfate symporter transmembrane region VIBHAR_02033 PF02698 DUF218 domain VIBHAR_02034 PF00390 Malic enzyme, N-terminal domain VIBHAR_02034 PF03949 Malic enzyme, NAD binding domain VIBHAR_02035 PF04408 Helicase associated domain (HA2) VIBHAR_02035 PF08482 ATP-dependent helicase C-terminal VIBHAR_02035 PF00271 Helicase conserved C-terminal domain VIBHAR_02035 PF00270 DEAD/DEAH box helicase VIBHAR_02036 PF02253 Phospholipase A1 VIBHAR_02038 PF09423 PhoD-like phosphatase VIBHAR_02038 PF16655 PhoD-like phosphatase, N-terminal domain VIBHAR_02039 PF01259 SAICAR synthetase VIBHAR_02051 PF13817 IS66 C-terminal element VIBHAR_02051 PF13007 Transposase C of IS166 homeodomain VIBHAR_02051 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_02051 PF03050 Transposase IS66 family VIBHAR_02060 PF00691 OmpA family VIBHAR_02060 PF05736 OprF membrane domain VIBHAR_02063 PF13183 4Fe-4S dicluster domain VIBHAR_02063 PF02913 FAD linked oxidases, C-terminal domain VIBHAR_02063 PF01565 FAD binding domain VIBHAR_02067 PF03496 ADP-ribosyltransferase exoenzyme VIBHAR_02068 PF03496 ADP-ribosyltransferase exoenzyme VIBHAR_02072 PF00221 Aromatic amino acid lyase VIBHAR_02073 PF01175 Urocanase Rossmann-like domain VIBHAR_02073 PF17391 Urocanase N-terminal domain VIBHAR_02073 PF17392 Urocanase C-terminal domain VIBHAR_02074 PF00491 Arginase family VIBHAR_02075 PF01979 Amidohydrolase family VIBHAR_02076 PF07702 UTRA domain VIBHAR_02076 PF00392 Bacterial regulatory proteins, gntR family VIBHAR_02079 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VIBHAR_02079 PF02824 TGS domain VIBHAR_02079 PF03129 Anticodon binding domain VIBHAR_02079 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VIBHAR_02080 PF05198 Translation initiation factor IF-3, N-terminal domain VIBHAR_02080 PF00707 Translation initiation factor IF-3, C-terminal domain VIBHAR_02081 PF01632 Ribosomal protein L35 VIBHAR_02082 PF00453 Ribosomal protein L20 VIBHAR_02083 PF03050 Transposase IS66 family VIBHAR_02083 PF13007 Transposase C of IS166 homeodomain VIBHAR_02083 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_02083 PF13817 IS66 C-terminal element VIBHAR_02087 PF01042 Endoribonuclease L-PSP VIBHAR_02088 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VIBHAR_02089 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VIBHAR_02090 PF01906 Putative heavy-metal-binding VIBHAR_02092 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain VIBHAR_02092 PF01409 tRNA synthetases class II core domain (F) VIBHAR_02093 PF03483 B3/4 domain VIBHAR_02093 PF03484 tRNA synthetase B5 domain VIBHAR_02093 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain VIBHAR_02093 PF01588 Putative tRNA binding domain VIBHAR_02093 PF03147 Ferredoxin-fold anticodon binding domain VIBHAR_02094 PF03050 Transposase IS66 family VIBHAR_02094 PF13007 Transposase C of IS166 homeodomain VIBHAR_02094 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_02094 PF13817 IS66 C-terminal element VIBHAR_02097 PF00857 Isochorismatase family VIBHAR_02097 PF00550 Phosphopantetheine attachment site VIBHAR_02098 PF00664 ABC transporter transmembrane region VIBHAR_02098 PF00005 ABC transporter VIBHAR_02099 PF00005 ABC transporter VIBHAR_02100 PF00282 Pyridoxal-dependent decarboxylase conserved domain VIBHAR_02101 PF00550 Phosphopantetheine attachment site VIBHAR_02101 PF00668 Condensation domain VIBHAR_02101 PF00501 AMP-binding enzyme VIBHAR_02102 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) VIBHAR_02103 PF00975 Thioesterase domain VIBHAR_02104 PF00668 Condensation domain VIBHAR_02104 PF00501 AMP-binding enzyme VIBHAR_02104 PF13193 AMP-binding enzyme C-terminal domain VIBHAR_02105 PF07715 TonB-dependent Receptor Plug Domain VIBHAR_02105 PF00593 TonB dependent receptor VIBHAR_02106 PF01497 Periplasmic binding protein VIBHAR_02107 PF01032 FecCD transport family VIBHAR_02108 PF01032 FecCD transport family VIBHAR_02109 PF00668 Condensation domain VIBHAR_02109 PF13193 AMP-binding enzyme C-terminal domain VIBHAR_02109 PF00550 Phosphopantetheine attachment site VIBHAR_02109 PF00501 AMP-binding enzyme VIBHAR_02112 PF00216 Bacterial DNA-binding protein VIBHAR_02114 PF05724 Thiopurine S-methyltransferase (TPMT) VIBHAR_02115 PF02222 ATP-grasp domain VIBHAR_02116 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region VIBHAR_02116 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VIBHAR_02117 PF04172 LrgB-like family VIBHAR_02118 PF03788 LrgA family VIBHAR_02119 PF00929 Exonuclease VIBHAR_02119 PF08411 Exonuclease C-terminal VIBHAR_02123 PF13460 NAD(P)H-binding VIBHAR_02124 PF01613 Flavin reductase like domain VIBHAR_02126 PF02277 Phosphoribosyltransferase VIBHAR_02127 PF02654 Cobalamin-5-phosphate synthase VIBHAR_02128 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase VIBHAR_02129 PF00300 Histidine phosphatase superfamily (branch 1) VIBHAR_02131 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family VIBHAR_02132 PF01032 FecCD transport family VIBHAR_02133 PF00005 ABC transporter VIBHAR_02134 PF13358 DDE superfamily endonuclease VIBHAR_02138 PF07690 Major Facilitator Superfamily VIBHAR_02139 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBHAR_02139 PF03466 LysR substrate binding domain VIBHAR_02142 PF03050 Transposase IS66 family VIBHAR_02142 PF13817 IS66 C-terminal element VIBHAR_02142 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_02142 PF13007 Transposase C of IS166 homeodomain VIBHAR_02144 PF01863 Protein of unknown function DUF45 VIBHAR_02145 PF05971 RNA methyltransferase VIBHAR_02146 PF13358 DDE superfamily endonuclease VIBHAR_02148 PF13333 Integrase core domain VIBHAR_02148 PF00665 Integrase core domain VIBHAR_02148 PF13276 HTH-like domain VIBHAR_02152 PF13737 Transposase DDE domain VIBHAR_02155 PF13358 DDE superfamily endonuclease VIBHAR_02158 PF13737 Transposase DDE domain VIBHAR_02160 PF01036 Bacteriorhodopsin-like protein VIBHAR_02161 PF00348 Polyprenyl synthetase VIBHAR_02167 PF12561 ToxR activated gene A lipoprotein domain VIBHAR_02167 PF00041 Fibronectin type III domain VIBHAR_02169 PF00041 Fibronectin type III domain VIBHAR_02169 PF12561 ToxR activated gene A lipoprotein domain VIBHAR_02171 PF13358 DDE superfamily endonuclease VIBHAR_02174 PF07687 Peptidase dimerisation domain VIBHAR_02174 PF01546 Peptidase family M20/M25/M40 VIBHAR_02175 PF13358 DDE superfamily endonuclease VIBHAR_02177 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VIBHAR_02178 PF04209 homogentisate 1,2-dioxygenase VIBHAR_02180 PF02798 Glutathione S-transferase, N-terminal domain VIBHAR_02180 PF14497 Glutathione S-transferase, C-terminal domain VIBHAR_02184 PF07859 alpha/beta hydrolase fold VIBHAR_02184 PF00934 PE family VIBHAR_02188 PF02281 Transposase Tn5 dimerisation domain VIBHAR_02188 PF01609 Transposase DDE domain VIBHAR_02188 PF14706 Transposase DNA-binding VIBHAR_02189 PF05552 Conserved TM helix VIBHAR_02189 PF00924 Mechanosensitive ion channel VIBHAR_02191 PF13673 Acetyltransferase (GNAT) domain VIBHAR_02193 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family VIBHAR_02194 PF12561 ToxR activated gene A lipoprotein domain VIBHAR_02194 PF17945 Beta/Gamma crystallin VIBHAR_02197 PF00924 Mechanosensitive ion channel VIBHAR_02198 PF03729 Short repeat of unknown function (DUF308) VIBHAR_02201 PF01047 MarR family VIBHAR_02204 PF01928 CYTH domain VIBHAR_02206 PF09308 LuxQ, periplasmic VIBHAR_02206 PF00512 His Kinase A (phospho-acceptor) domain VIBHAR_02206 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBHAR_02206 PF00072 Response regulator receiver domain VIBHAR_02207 PF00132 Bacterial transferase hexapeptide (six repeats) VIBHAR_02207 PF12464 Maltose acetyltransferase VIBHAR_02212 PF01627 Hpt domain VIBHAR_02212 PF00672 HAMP domain VIBHAR_02212 PF00072 Response regulator receiver domain VIBHAR_02212 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBHAR_02212 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VIBHAR_02212 PF00512 His Kinase A (phospho-acceptor) domain VIBHAR_02213 PF13188 PAS domain VIBHAR_02213 PF03707 Bacterial signalling protein N terminal repeat VIBHAR_02213 PF00990 Diguanylate cyclase, GGDEF domain VIBHAR_02213 PF00563 EAL domain VIBHAR_02218 PF02397 Bacterial sugar transferase VIBHAR_02220 PF13439 Glycosyltransferase Family 4 VIBHAR_02220 PF00534 Glycosyl transferases group 1 VIBHAR_02226 PF00534 Glycosyl transferases group 1 VIBHAR_02227 PF13439 Glycosyltransferase Family 4 VIBHAR_02227 PF00534 Glycosyl transferases group 1 VIBHAR_02228 PF00072 Response regulator receiver domain VIBHAR_02228 PF00158 Sigma-54 interaction domain VIBHAR_02228 PF02954 Bacterial regulatory protein, Fis family VIBHAR_02231 PF10531 SLBB domain VIBHAR_02231 PF02563 Polysaccharide biosynthesis/export protein VIBHAR_02232 PF00691 OmpA family VIBHAR_02233 PF01740 STAS domain VIBHAR_02236 PF01554 MatE VIBHAR_02237 PF00677 Lumazine binding domain VIBHAR_02240 PF00072 Response regulator receiver domain VIBHAR_02240 PF01339 CheB methylesterase VIBHAR_02241 PF05230 MASE2 domain VIBHAR_02241 PF00990 Diguanylate cyclase, GGDEF domain VIBHAR_02243 PF00877 NlpC/P60 family VIBHAR_02244 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBHAR_02244 PF00672 HAMP domain VIBHAR_02244 PF12729 Four helix bundle sensory module for signal transduction VIBHAR_02249 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) VIBHAR_02257 PF00480 ROK family VIBHAR_02260 PF00994 Probable molybdopterin binding domain VIBHAR_02260 PF03454 MoeA C-terminal region (domain IV) VIBHAR_02260 PF03453 MoeA N-terminal region (domain I and II) VIBHAR_02261 PF12804 MobA-like NTP transferase domain VIBHAR_02262 PF00005 ABC transporter VIBHAR_02262 PF08402 TOBE domain VIBHAR_02263 PF00528 Binding-protein-dependent transport system inner membrane component VIBHAR_02264 PF12849 PBP superfamily domain VIBHAR_02265 PF02954 Bacterial regulatory protein, Fis family VIBHAR_02265 PF00072 Response regulator receiver domain VIBHAR_02265 PF00158 Sigma-54 interaction domain VIBHAR_02266 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBHAR_02266 PF00512 His Kinase A (phospho-acceptor) domain VIBHAR_02269 PF12848 ABC transporter VIBHAR_02269 PF00005 ABC transporter VIBHAR_02271 PF02634 FdhD/NarQ family VIBHAR_02275 PF02613 Nitrate reductase delta subunit VIBHAR_02278 PF00384 Molybdopterin oxidoreductase VIBHAR_02278 PF01568 Molydopterin dinucleotide binding domain VIBHAR_02278 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VIBHAR_02279 PF13247 4Fe-4S dicluster domain VIBHAR_02282 PF01609 Transposase DDE domain VIBHAR_02282 PF14706 Transposase DNA-binding VIBHAR_02282 PF02281 Transposase Tn5 dimerisation domain VIBHAR_02284 PF02146 Sir2 family VIBHAR_02285 PF13416 Bacterial extracellular solute-binding protein VIBHAR_02286 PF13416 Bacterial extracellular solute-binding protein VIBHAR_02287 PF00528 Binding-protein-dependent transport system inner membrane component VIBHAR_02288 PF00528 Binding-protein-dependent transport system inner membrane component VIBHAR_02289 PF00005 ABC transporter VIBHAR_02289 PF08402 TOBE domain VIBHAR_02293 PF01171 PP-loop family VIBHAR_02294 PF00582 Universal stress protein family VIBHAR_02295 PF13545 Crp-like helix-turn-helix domain VIBHAR_02295 PF00027 Cyclic nucleotide-binding domain VIBHAR_02298 PF00403 Heavy-metal-associated domain VIBHAR_02300 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VIBHAR_02300 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP VIBHAR_02303 PF00115 Cytochrome C and Quinol oxidase polypeptide I VIBHAR_02306 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBHAR_02306 PF00072 Response regulator receiver domain VIBHAR_02306 PF09308 LuxQ, periplasmic VIBHAR_02306 PF00512 His Kinase A (phospho-acceptor) domain VIBHAR_02327 PF00665 Integrase core domain VIBHAR_02327 PF13333 Integrase core domain VIBHAR_02327 PF13276 HTH-like domain VIBHAR_02330 PF06303 MatP N-terminal domain VIBHAR_02330 PF17414 MatP C-terminal ribbon-helix-helix domain VIBHAR_02331 PF13654 AAA domain VIBHAR_02331 PF05362 Lon protease (S16) C-terminal proteolytic domain VIBHAR_02332 PF07977 FabA-like domain VIBHAR_02333 PF04957 Ribosome modulation factor VIBHAR_02337 PF02926 THUMP domain VIBHAR_02337 PF10672 S-adenosylmethionine-dependent methyltransferase VIBHAR_02337 PF01170 Putative RNA methylase family UPF0020 VIBHAR_02338 PF07126 Cell-division protein ZapC VIBHAR_02339 PF01180 Dihydroorotate dehydrogenase VIBHAR_02340 PF01609 Transposase DDE domain VIBHAR_02340 PF14706 Transposase DNA-binding VIBHAR_02340 PF02281 Transposase Tn5 dimerisation domain VIBHAR_02341 PF00665 Integrase core domain VIBHAR_02342 PF05088 Bacterial NAD-glutamate dehydrogenase VIBHAR_02344 PF01433 Peptidase family M1 domain VIBHAR_02344 PF17432 Domain of unknown function (DUF3458_C) ARM repeats VIBHAR_02344 PF11940 Domain of unknown function (DUF3458) Ig-like fold VIBHAR_02346 PF11818 C-terminal domain of tail specific protease (DUF3340) VIBHAR_02346 PF00595 PDZ domain VIBHAR_02346 PF17804 Tail specific protease N-terminal domain VIBHAR_02346 PF03572 Peptidase family S41 VIBHAR_02347 PF04352 ProQ/FINO family VIBHAR_02347 PF17516 ProQ C-terminal domain VIBHAR_02348 PF13185 GAF domain VIBHAR_02349 PF00005 ABC transporter VIBHAR_02349 PF00664 ABC transporter transmembrane region VIBHAR_02350 PF04403 Paraquat-inducible protein A VIBHAR_02351 PF02470 MlaD protein VIBHAR_02352 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF VIBHAR_02352 PF01189 16S rRNA methyltransferase RsmB/F VIBHAR_02352 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF VIBHAR_02357 PF00793 DAHP synthetase I family VIBHAR_02358 PF04461 Protein of unknown function (DUF520) VIBHAR_02359 PF10414 Sirohaem synthase dimerisation region VIBHAR_02359 PF14824 Sirohaem biosynthesis protein central VIBHAR_02359 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VIBHAR_02361 PF00497 Bacterial extracellular solute-binding proteins, family 3 VIBHAR_02362 PF00528 Binding-protein-dependent transport system inner membrane component VIBHAR_02363 PF00528 Binding-protein-dependent transport system inner membrane component VIBHAR_02364 PF00005 ABC transporter VIBHAR_02365 PF01027 Inhibitor of apoptosis-promoting Bax1 VIBHAR_02366 PF04358 DsrC like protein VIBHAR_02367 PF00708 Acylphosphatase VIBHAR_02368 PF02743 Cache domain VIBHAR_02368 PF00672 HAMP domain VIBHAR_02368 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBHAR_02370 PF17785 PUA-like domain VIBHAR_02370 PF10672 S-adenosylmethionine-dependent methyltransferase VIBHAR_02373 PF05736 OprF membrane domain VIBHAR_02373 PF00691 OmpA family VIBHAR_02377 PF13007 Transposase C of IS166 homeodomain VIBHAR_02377 PF13817 IS66 C-terminal element VIBHAR_02377 PF03050 Transposase IS66 family VIBHAR_02377 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_02383 PF00990 Diguanylate cyclase, GGDEF domain VIBHAR_02383 PF17158 Membrane-associated sensor, integral membrane domain VIBHAR_02384 PF06508 Queuosine biosynthesis protein QueC VIBHAR_02385 PF04055 Radical SAM superfamily VIBHAR_02393 PF13193 AMP-binding enzyme C-terminal domain VIBHAR_02393 PF00501 AMP-binding enzyme VIBHAR_02393 PF16177 Acetyl-coenzyme A synthetase N-terminus VIBHAR_02394 PF04303 PrpF protein VIBHAR_02395 PF00694 Aconitase C-terminal domain VIBHAR_02395 PF00330 Aconitase family (aconitate hydratase) VIBHAR_02396 PF00285 Citrate synthase, C-terminal domain VIBHAR_02399 PF01966 HD domain VIBHAR_02401 PF13007 Transposase C of IS166 homeodomain VIBHAR_02401 PF03050 Transposase IS66 family VIBHAR_02401 PF13817 IS66 C-terminal element VIBHAR_02401 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_02410 PF13817 IS66 C-terminal element VIBHAR_02410 PF13007 Transposase C of IS166 homeodomain VIBHAR_02410 PF03050 Transposase IS66 family VIBHAR_02410 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_02412 PF00665 Integrase core domain VIBHAR_02412 PF13333 Integrase core domain VIBHAR_02412 PF13276 HTH-like domain VIBHAR_02416 PF01970 Tripartite tricarboxylate transporter TctA family VIBHAR_02417 PF01925 Sulfite exporter TauE/SafE VIBHAR_02418 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBHAR_02418 PF00672 HAMP domain VIBHAR_02418 PF02743 Cache domain VIBHAR_02419 PF16868 NMT1-like family VIBHAR_02420 PF00171 Aldehyde dehydrogenase family VIBHAR_02421 PF01590 GAF domain VIBHAR_02421 PF02954 Bacterial regulatory protein, Fis family VIBHAR_02421 PF00158 Sigma-54 interaction domain VIBHAR_02426 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) VIBHAR_02427 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain VIBHAR_02427 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VIBHAR_02428 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase VIBHAR_02429 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain VIBHAR_02429 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain VIBHAR_02430 PF00072 Response regulator receiver domain VIBHAR_02430 PF12431 Transcriptional regulator VIBHAR_02431 PF17203 Single cache domain 3 VIBHAR_02431 PF00989 PAS fold VIBHAR_02431 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBHAR_02431 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain VIBHAR_02435 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VIBHAR_02438 PF13333 Integrase core domain VIBHAR_02438 PF00665 Integrase core domain VIBHAR_02438 PF13276 HTH-like domain VIBHAR_02442 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_02442 PF13007 Transposase C of IS166 homeodomain VIBHAR_02442 PF13817 IS66 C-terminal element VIBHAR_02442 PF03050 Transposase IS66 family VIBHAR_02447 PF13737 Transposase DDE domain VIBHAR_02448 PF02868 Thermolysin metallopeptidase, alpha-helical domain VIBHAR_02448 PF01447 Thermolysin metallopeptidase, catalytic domain VIBHAR_02448 PF03413 Peptidase propeptide and YPEB domain VIBHAR_02448 PF07504 Fungalysin/Thermolysin Propeptide Motif VIBHAR_02448 PF04151 Bacterial pre-peptidase C-terminal domain VIBHAR_02449 PF04151 Bacterial pre-peptidase C-terminal domain VIBHAR_02449 PF00082 Subtilase family VIBHAR_02449 PF05922 Peptidase inhibitor I9 VIBHAR_02450 PF03150 Di-haem cytochrome c peroxidase VIBHAR_02450 PF00034 Cytochrome c VIBHAR_02451 PF13840 ACT domain VIBHAR_02451 PF00696 Amino acid kinase family VIBHAR_02452 PF06339 Ectoine synthase VIBHAR_02453 PF00202 Aminotransferase class-III VIBHAR_02454 PF00583 Acetyltransferase (GNAT) family VIBHAR_02455 PF02028 BCCT, betaine/carnitine/choline family transporter VIBHAR_02457 PF00571 CBS domain VIBHAR_02458 PF01554 MatE VIBHAR_02459 PF01406 tRNA synthetases class I (C) catalytic domain VIBHAR_02463 PF13358 DDE superfamily endonuclease VIBHAR_02464 PF00884 Sulfatase VIBHAR_02469 PF01235 Sodium:alanine symporter family VIBHAR_02472 PF03440 Aerolysin/Pertussis toxin (APT) domain VIBHAR_02472 PF01117 Aerolysin toxin VIBHAR_02473 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain VIBHAR_02474 PF03440 Aerolysin/Pertussis toxin (APT) domain VIBHAR_02474 PF01117 Aerolysin toxin VIBHAR_02476 PF01810 LysE type translocator VIBHAR_02477 PF02074 Carboxypeptidase Taq (M32) metallopeptidase VIBHAR_02481 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VIBHAR_02482 PF03279 Bacterial lipid A biosynthesis acyltransferase VIBHAR_02483 PF01810 LysE type translocator VIBHAR_02485 PF13520 Amino acid permease VIBHAR_02486 PF00893 Small Multidrug Resistance protein VIBHAR_02490 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) VIBHAR_02491 PF04204 Homoserine O-succinyltransferase VIBHAR_02492 PF01609 Transposase DDE domain VIBHAR_02492 PF13006 Insertion element 4 transposase N-terminal VIBHAR_02496 PF13340 Putative transposase of IS4/5 family (DUF4096) VIBHAR_02501 PF11898 Domain of unknown function (DUF3418) VIBHAR_02501 PF00270 DEAD/DEAH box helicase VIBHAR_02501 PF04408 Helicase associated domain (HA2) VIBHAR_02501 PF00271 Helicase conserved C-terminal domain VIBHAR_02501 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold VIBHAR_02502 PF02525 Flavodoxin-like fold VIBHAR_02504 PF02613 Nitrate reductase delta subunit VIBHAR_02505 PF04976 DMSO reductase anchor subunit (DmsC) VIBHAR_02506 PF13247 4Fe-4S dicluster domain VIBHAR_02506 PF12800 4Fe-4S binding domain VIBHAR_02507 PF01568 Molydopterin dinucleotide binding domain VIBHAR_02507 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VIBHAR_02507 PF00384 Molybdopterin oxidoreductase VIBHAR_02509 PF03413 Peptidase propeptide and YPEB domain VIBHAR_02509 PF04151 Bacterial pre-peptidase C-terminal domain VIBHAR_02509 PF02868 Thermolysin metallopeptidase, alpha-helical domain VIBHAR_02509 PF01447 Thermolysin metallopeptidase, catalytic domain VIBHAR_02509 PF07504 Fungalysin/Thermolysin Propeptide Motif VIBHAR_02517 PF00990 Diguanylate cyclase, GGDEF domain VIBHAR_02519 PF00012 Hsp70 protein VIBHAR_02520 PF00012 Hsp70 protein VIBHAR_02524 PF00664 ABC transporter transmembrane region VIBHAR_02524 PF00005 ABC transporter VIBHAR_02525 PF00664 ABC transporter transmembrane region VIBHAR_02525 PF00005 ABC transporter VIBHAR_02530 PF03222 Tryptophan/tyrosine permease family VIBHAR_02531 PF00465 Iron-containing alcohol dehydrogenase VIBHAR_02532 PF00106 short chain dehydrogenase VIBHAR_02536 PF03741 Integral membrane protein TerC family VIBHAR_02537 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBHAR_02537 PF03466 LysR substrate binding domain VIBHAR_02539 PF04055 Radical SAM superfamily VIBHAR_02540 PF11230 Protein of unknown function (DUF3029) VIBHAR_02542 PF11871 Domain of unknown function (DUF3391) VIBHAR_02542 PF01966 HD domain VIBHAR_02543 PF00563 EAL domain VIBHAR_02543 PF00990 Diguanylate cyclase, GGDEF domain VIBHAR_02543 PF03707 Bacterial signalling protein N terminal repeat VIBHAR_02545 PF00158 Sigma-54 interaction domain VIBHAR_02545 PF00072 Response regulator receiver domain VIBHAR_02545 PF02954 Bacterial regulatory protein, Fis family VIBHAR_02548 PF13358 DDE superfamily endonuclease VIBHAR_02551 PF00561 alpha/beta hydrolase fold VIBHAR_02555 PF03328 HpcH/HpaI aldolase/citrate lyase family VIBHAR_02556 PF00356 Bacterial regulatory proteins, lacI family VIBHAR_02557 PF03480 Bacterial extracellular solute-binding protein, family 7 VIBHAR_02558 PF03480 Bacterial extracellular solute-binding protein, family 7 VIBHAR_02560 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VIBHAR_02564 PF00474 Sodium:solute symporter family VIBHAR_02565 PF01609 Transposase DDE domain VIBHAR_02565 PF13006 Insertion element 4 transposase N-terminal VIBHAR_02569 PF03575 Peptidase family S51 VIBHAR_02574 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_02574 PF13007 Transposase C of IS166 homeodomain VIBHAR_02574 PF13817 IS66 C-terminal element VIBHAR_02574 PF03050 Transposase IS66 family VIBHAR_02583 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) VIBHAR_02584 PF01568 Molydopterin dinucleotide binding domain VIBHAR_02584 PF00384 Molybdopterin oxidoreductase VIBHAR_02584 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VIBHAR_02586 PF13247 4Fe-4S dicluster domain VIBHAR_02587 PF04229 GrpB protein VIBHAR_02591 PF01548 Transposase VIBHAR_02591 PF02371 Transposase IS116/IS110/IS902 family VIBHAR_02598 PF02371 Transposase IS116/IS110/IS902 family VIBHAR_02598 PF01548 Transposase VIBHAR_02599 PF02371 Transposase IS116/IS110/IS902 family VIBHAR_02599 PF01548 Transposase VIBHAR_02603 PF02371 Transposase IS116/IS110/IS902 family VIBHAR_02603 PF01548 Transposase VIBHAR_02605 PF13358 DDE superfamily endonuclease VIBHAR_02606 PF07992 Pyridine nucleotide-disulphide oxidoreductase VIBHAR_02607 PF00664 ABC transporter transmembrane region VIBHAR_02607 PF00005 ABC transporter VIBHAR_02608 PF00005 ABC transporter VIBHAR_02608 PF00664 ABC transporter transmembrane region VIBHAR_02609 PF00291 Pyridoxal-phosphate dependent enzyme VIBHAR_02610 PF03466 LysR substrate binding domain VIBHAR_02610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBHAR_02611 PF03466 LysR substrate binding domain VIBHAR_02611 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBHAR_02613 PF13340 Putative transposase of IS4/5 family (DUF4096) VIBHAR_02614 PF00563 EAL domain VIBHAR_02614 PF12792 CSS motif domain associated with EAL VIBHAR_02616 PF13340 Putative transposase of IS4/5 family (DUF4096) VIBHAR_02620 PF00990 Diguanylate cyclase, GGDEF domain VIBHAR_02620 PF08448 PAS fold VIBHAR_02620 PF08447 PAS fold VIBHAR_02620 PF00563 EAL domain VIBHAR_02623 PF00266 Aminotransferase class-V VIBHAR_02625 PF00512 His Kinase A (phospho-acceptor) domain VIBHAR_02625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBHAR_02625 PF00497 Bacterial extracellular solute-binding proteins, family 3 VIBHAR_02628 PF04993 TfoX N-terminal domain VIBHAR_02628 PF04994 TfoX C-terminal domain VIBHAR_02630 PF03956 Lysine exporter LysO VIBHAR_02632 PF00282 Pyridoxal-dependent decarboxylase conserved domain VIBHAR_02633 PF01380 SIS domain VIBHAR_02633 PF01418 Helix-turn-helix domain, rpiR family VIBHAR_02634 PF00465 Iron-containing alcohol dehydrogenase VIBHAR_02635 PF00462 Glutaredoxin VIBHAR_02636 PF02080 TrkA-C domain VIBHAR_02636 PF06826 Predicted Permease Membrane Region VIBHAR_02637 PF12241 Trans-2-enoyl-CoA reductase catalytic region VIBHAR_02637 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase VIBHAR_02637 PF07055 Enoyl reductase FAD binding domain VIBHAR_02638 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VIBHAR_02638 PF09317 Domain of unknown function (DUF1974) VIBHAR_02638 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VIBHAR_02638 PF02770 Acyl-CoA dehydrogenase, middle domain VIBHAR_02639 PF16295 Tetracyclin repressor-like, C-terminal domain VIBHAR_02639 PF00440 Bacterial regulatory proteins, tetR family VIBHAR_02641 PF14706 Transposase DNA-binding VIBHAR_02641 PF01609 Transposase DDE domain VIBHAR_02641 PF02281 Transposase Tn5 dimerisation domain VIBHAR_02644 PF13817 IS66 C-terminal element VIBHAR_02644 PF03050 Transposase IS66 family VIBHAR_02644 PF13007 Transposase C of IS166 homeodomain VIBHAR_02644 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_02646 PF06965 Na+/H+ antiporter 1 VIBHAR_02649 PF00005 ABC transporter VIBHAR_02650 PF01554 MatE VIBHAR_02651 PF13460 NAD(P)H-binding VIBHAR_02651 PF11066 Protein of unknown function (DUF2867) VIBHAR_02652 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) VIBHAR_02654 PF07690 Major Facilitator Superfamily VIBHAR_02655 PF00849 RNA pseudouridylate synthase VIBHAR_02655 PF01479 S4 domain VIBHAR_02656 PF00271 Helicase conserved C-terminal domain VIBHAR_02656 PF04851 Type III restriction enzyme, res subunit VIBHAR_02658 PF00486 Transcriptional regulatory protein, C terminal VIBHAR_02658 PF00072 Response regulator receiver domain VIBHAR_02659 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBHAR_02659 PF00512 His Kinase A (phospho-acceptor) domain VIBHAR_02659 PF00672 HAMP domain VIBHAR_02661 PF00535 Glycosyl transferase family 2 VIBHAR_02661 PF02709 N-terminal domain of galactosyltransferase VIBHAR_02662 PF01386 Ribosomal L25p family VIBHAR_02665 PF00149 Calcineurin-like phosphoesterase VIBHAR_02665 PF02872 5'-nucleotidase, C-terminal domain VIBHAR_02667 PF06945 Protein of unknown function (DUF1289) VIBHAR_02670 PF01740 STAS domain VIBHAR_02670 PF00916 Sulfate permease family VIBHAR_02672 PF00072 Response regulator receiver domain VIBHAR_02672 PF00196 Bacterial regulatory proteins, luxR family VIBHAR_02677 PF09335 SNARE associated Golgi protein VIBHAR_02678 PF13416 Bacterial extracellular solute-binding protein VIBHAR_02679 PF00528 Binding-protein-dependent transport system inner membrane component VIBHAR_02680 PF00005 ABC transporter VIBHAR_02681 PF01066 CDP-alcohol phosphatidyltransferase VIBHAR_02683 PF07690 Major Facilitator Superfamily VIBHAR_02686 PF01590 GAF domain VIBHAR_02686 PF00158 Sigma-54 interaction domain VIBHAR_02687 PF03063 Prismane/CO dehydrogenase family VIBHAR_02688 PF13358 DDE superfamily endonuclease VIBHAR_02690 PF00849 RNA pseudouridylate synthase VIBHAR_02691 PF12729 Four helix bundle sensory module for signal transduction VIBHAR_02691 PF00672 HAMP domain VIBHAR_02691 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBHAR_02692 PF00209 Sodium:neurotransmitter symporter family VIBHAR_02693 PF13091 PLD-like domain VIBHAR_02693 PF13396 Phospholipase_D-nuclease N-terminal VIBHAR_02695 PF01053 Cys/Met metabolism PLP-dependent enzyme VIBHAR_02696 PF00561 alpha/beta hydrolase fold VIBHAR_02697 PF03280 Proteobacterial lipase chaperone protein VIBHAR_02698 PF13358 DDE superfamily endonuclease VIBHAR_02701 PF13358 DDE superfamily endonuclease VIBHAR_02702 PF17200 Single Cache domain 2 VIBHAR_02702 PF07730 Histidine kinase VIBHAR_02703 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VIBHAR_02705 PF03480 Bacterial extracellular solute-binding protein, family 7 VIBHAR_02708 PF00753 Metallo-beta-lactamase superfamily VIBHAR_02709 PF05951 Bacterial protein of unknown function (DUF882) VIBHAR_02710 PF01471 Putative peptidoglycan binding domain VIBHAR_02710 PF03734 L,D-transpeptidase catalytic domain VIBHAR_02717 PF00925 GTP cyclohydrolase II VIBHAR_02720 PF03918 Cytochrome C biogenesis protein VIBHAR_02721 PF08534 Redoxin VIBHAR_02722 PF01578 Cytochrome C assembly protein VIBHAR_02722 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal VIBHAR_02723 PF03916 Polysulphide reductase, NrfD VIBHAR_02724 PF13247 4Fe-4S dicluster domain VIBHAR_02725 PF13247 4Fe-4S dicluster domain VIBHAR_02727 PF02335 Cytochrome c552 VIBHAR_02730 PF03989 DNA gyrase C-terminal domain, beta-propeller VIBHAR_02730 PF00521 DNA gyrase/topoisomerase IV, subunit A VIBHAR_02733 PF03477 ATP cone domain VIBHAR_02733 PF02867 Ribonucleotide reductase, barrel domain VIBHAR_02733 PF00317 Ribonucleotide reductase, all-alpha domain VIBHAR_02734 PF00268 Ribonucleotide reductase, small chain VIBHAR_02736 PF02464 Competence-damaged protein VIBHAR_02736 PF00994 Probable molybdopterin binding domain VIBHAR_02739 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain VIBHAR_02740 PF16653 Saccharopine dehydrogenase C-terminal domain VIBHAR_02740 PF03435 Saccharopine dehydrogenase NADP binding domain VIBHAR_02741 PF00202 Aminotransferase class-III VIBHAR_02746 PF01066 CDP-alcohol phosphatidyltransferase VIBHAR_02747 PF01541 GIY-YIG catalytic domain VIBHAR_02747 PF02151 UvrB/uvrC motif VIBHAR_02747 PF08459 UvrC Helix-hairpin-helix N-terminal VIBHAR_02748 PF00196 Bacterial regulatory proteins, luxR family VIBHAR_02748 PF00072 Response regulator receiver domain VIBHAR_02749 PF00136 DNA polymerase family B VIBHAR_02749 PF03104 DNA polymerase family B, exonuclease domain VIBHAR_02751 PF08207 Elongation factor P (EF-P) KOW-like domain VIBHAR_02751 PF01132 Elongation factor P (EF-P) OB domain VIBHAR_02751 PF09285 Elongation factor P, C-terminal VIBHAR_02752 PF04269 Protein of unknown function, DUF440 VIBHAR_02753 PF01479 S4 domain VIBHAR_02753 PF00849 RNA pseudouridylate synthase VIBHAR_02755 PF01300 Telomere recombination VIBHAR_02756 PF02811 PHP domain VIBHAR_02757 PF08056 Tryptophan operon leader peptide VIBHAR_02758 PF04715 Anthranilate synthase component I, N terminal region VIBHAR_02758 PF00425 chorismate binding enzyme VIBHAR_02759 PF00117 Glutamine amidotransferase class-I VIBHAR_02760 PF02885 Glycosyl transferase family, helical bundle domain VIBHAR_02760 PF00591 Glycosyl transferase family, a/b domain VIBHAR_02761 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase VIBHAR_02761 PF00218 Indole-3-glycerol phosphate synthase VIBHAR_02762 PF00291 Pyridoxal-phosphate dependent enzyme VIBHAR_02763 PF00290 Tryptophan synthase alpha chain VIBHAR_02764 PF00375 Sodium:dicarboxylate symporter family VIBHAR_02765 PF17327 Acyl homoserine lactone synthase VIBHAR_02766 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBHAR_02766 PF00072 Response regulator receiver domain VIBHAR_02768 PF04279 Intracellular septation protein A VIBHAR_02769 PF03061 Thioesterase superfamily VIBHAR_02770 PF03795 YCII-related domain VIBHAR_02772 PF01717 Cobalamin-independent synthase, Catalytic domain VIBHAR_02772 PF08267 Cobalamin-independent synthase, N-terminal domain VIBHAR_02773 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBHAR_02773 PF03466 LysR substrate binding domain VIBHAR_02776 PF00563 EAL domain VIBHAR_02776 PF00498 FHA domain VIBHAR_02776 PF00990 Diguanylate cyclase, GGDEF domain VIBHAR_02777 PF11842 Domain of unknown function (DUF3362) VIBHAR_02777 PF04055 Radical SAM superfamily VIBHAR_02777 PF08497 Radical SAM N-terminal VIBHAR_02782 PF07992 Pyridine nucleotide-disulphide oxidoreductase VIBHAR_02782 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VIBHAR_02783 PF00375 Sodium:dicarboxylate symporter family VIBHAR_02784 PF01042 Endoribonuclease L-PSP VIBHAR_02785 PF13309 HTH domain VIBHAR_02785 PF08348 YheO-like PAS domain VIBHAR_02787 PF02668 Taurine catabolism dioxygenase TauD, TfdA family VIBHAR_02788 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBHAR_02788 PF00672 HAMP domain VIBHAR_02790 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase VIBHAR_02791 PF00535 Glycosyl transferase family 2 VIBHAR_02792 PF00486 Transcriptional regulatory protein, C terminal VIBHAR_02792 PF00072 Response regulator receiver domain VIBHAR_02793 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBHAR_02793 PF00512 His Kinase A (phospho-acceptor) domain VIBHAR_02793 PF00672 HAMP domain VIBHAR_02799 PF02371 Transposase IS116/IS110/IS902 family VIBHAR_02799 PF01548 Transposase VIBHAR_02800 PF08267 Cobalamin-independent synthase, N-terminal domain VIBHAR_02800 PF01717 Cobalamin-independent synthase, Catalytic domain VIBHAR_02810 PF00106 short chain dehydrogenase VIBHAR_02812 PF02371 Transposase IS116/IS110/IS902 family VIBHAR_02812 PF01548 Transposase VIBHAR_02813 PF13333 Integrase core domain VIBHAR_02813 PF00665 Integrase core domain VIBHAR_02813 PF13276 HTH-like domain VIBHAR_02825 PF02954 Bacterial regulatory protein, Fis family VIBHAR_02827 PF02631 RecX family VIBHAR_02830 PF07733 Bacterial DNA polymerase III alpha NTPase domain VIBHAR_02830 PF11490 DNA polymerase III polC-type N-terminus II VIBHAR_02830 PF17657 Bacterial DNA polymerase III alpha subunit finger domain VIBHAR_02830 PF00929 Exonuclease VIBHAR_02830 PF02811 PHP domain VIBHAR_02830 PF14579 Helix-hairpin-helix motif VIBHAR_02832 PF03543 Yersinia/Haemophilus virulence surface antigen VIBHAR_02834 PF00005 ABC transporter VIBHAR_02834 PF12704 MacB-like periplasmic core domain VIBHAR_02834 PF02687 FtsX-like permease family VIBHAR_02835 PF02687 FtsX-like permease family VIBHAR_02835 PF00005 ABC transporter VIBHAR_02835 PF12704 MacB-like periplasmic core domain VIBHAR_02836 PF00005 ABC transporter VIBHAR_02836 PF12704 MacB-like periplasmic core domain VIBHAR_02836 PF02687 FtsX-like permease family VIBHAR_02838 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VIBHAR_02844 PF01938 TRAM domain VIBHAR_02844 PF05958 tRNA (Uracil-5-)-methyltransferase VIBHAR_02847 PF02683 Cytochrome C biogenesis protein transmembrane region VIBHAR_02847 PF11412 Disulphide bond corrector protein DsbC VIBHAR_02849 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBHAR_02849 PF03466 LysR substrate binding domain VIBHAR_02850 PF04403 Paraquat-inducible protein A VIBHAR_02851 PF02470 MlaD protein VIBHAR_02852 PF03886 ABC-type transport auxiliary lipoprotein component VIBHAR_02855 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VIBHAR_02856 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family VIBHAR_02857 PF18073 Rubredoxin metal binding domain VIBHAR_02858 PF06305 Lipopolysaccharide assembly protein A domain VIBHAR_02859 PF00216 Bacterial DNA-binding protein VIBHAR_02860 PF00575 S1 RNA binding domain VIBHAR_02861 PF02224 Cytidylate kinase VIBHAR_02863 PF01343 Peptidase family S49 VIBHAR_02863 PF08496 Peptidase family S49 N-terminal VIBHAR_02865 PF00106 short chain dehydrogenase VIBHAR_02868 PF07733 Bacterial DNA polymerase III alpha NTPase domain VIBHAR_02868 PF17657 Bacterial DNA polymerase III alpha subunit finger domain VIBHAR_02868 PF14579 Helix-hairpin-helix motif VIBHAR_02868 PF02811 PHP domain VIBHAR_02868 PF01336 OB-fold nucleic acid binding domain VIBHAR_02869 PF00072 Response regulator receiver domain VIBHAR_02869 PF01584 CheW-like domain VIBHAR_02870 PF00480 ROK family VIBHAR_02873 PF13007 Transposase C of IS166 homeodomain VIBHAR_02873 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_02873 PF13817 IS66 C-terminal element VIBHAR_02873 PF03050 Transposase IS66 family VIBHAR_02874 PF02887 Pyruvate kinase, alpha/beta domain VIBHAR_02874 PF00224 Pyruvate kinase, barrel domain VIBHAR_02877 PF13737 Transposase DDE domain VIBHAR_02879 PF00135 Carboxylesterase family VIBHAR_02885 PF09134 Invasin, domain 3 VIBHAR_02885 PF11924 Inverse autotransporter, beta-domain VIBHAR_02885 PF02369 Bacterial Ig-like domain (group 1) VIBHAR_02885 PF07979 Intimin C-type lectin domain VIBHAR_02886 PF13333 Integrase core domain VIBHAR_02886 PF00665 Integrase core domain VIBHAR_02886 PF13276 HTH-like domain VIBHAR_02889 PF03050 Transposase IS66 family VIBHAR_02889 PF13817 IS66 C-terminal element VIBHAR_02889 PF13007 Transposase C of IS166 homeodomain VIBHAR_02889 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_02892 PF01734 Patatin-like phospholipase VIBHAR_02896 PF00209 Sodium:neurotransmitter symporter family VIBHAR_02898 PF13006 Insertion element 4 transposase N-terminal VIBHAR_02898 PF01609 Transposase DDE domain VIBHAR_02900 PF02378 Phosphotransferase system, EIIC VIBHAR_02900 PF00367 phosphotransferase system, EIIB VIBHAR_02901 PF01026 TatD related DNase VIBHAR_02902 PF09115 DNA polymerase III, delta subunit, C terminal VIBHAR_02903 PF02223 Thymidylate kinase VIBHAR_02904 PF02618 YceG-like family VIBHAR_02905 PF01063 Amino-transferase class IV VIBHAR_02906 PF00109 Beta-ketoacyl synthase, N-terminal domain VIBHAR_02906 PF02801 Beta-ketoacyl synthase, C-terminal domain VIBHAR_02907 PF00550 Phosphopantetheine attachment site VIBHAR_02909 PF00698 Acyl transferase domain VIBHAR_02910 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal VIBHAR_02910 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III VIBHAR_02911 PF02504 Fatty acid synthesis protein VIBHAR_02912 PF01783 Ribosomal L32p protein family VIBHAR_02913 PF02620 Large ribosomal RNA subunit accumulation protein YceD VIBHAR_02914 PF02545 Maf-like protein VIBHAR_02915 PF01548 Transposase VIBHAR_02915 PF02371 Transposase IS116/IS110/IS902 family VIBHAR_02917 PF00849 RNA pseudouridylate synthase VIBHAR_02917 PF01479 S4 domain VIBHAR_02918 PF12111 Polyribonucleotide phosphorylase C terminal VIBHAR_02918 PF10150 Ribonuclease E/G family VIBHAR_02918 PF00575 S1 RNA binding domain VIBHAR_02919 PF14706 Transposase DNA-binding VIBHAR_02919 PF01609 Transposase DDE domain VIBHAR_02919 PF02281 Transposase Tn5 dimerisation domain VIBHAR_02920 PF01740 STAS domain VIBHAR_02920 PF00916 Sulfate permease family VIBHAR_02921 PF01451 Low molecular weight phosphotyrosine protein phosphatase VIBHAR_02922 PF12557 Cob(I)alamin adenosyltransferase N terminal VIBHAR_02922 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP VIBHAR_02924 PF00485 Phosphoribulokinase / Uridine kinase family VIBHAR_02926 PF10609 NUBPL iron-transfer P-loop NTPase VIBHAR_02927 PF09334 tRNA synthetases class I (M) VIBHAR_02927 PF01588 Putative tRNA binding domain VIBHAR_02929 PF07840 FadR C-terminal domain VIBHAR_02929 PF00392 Bacterial regulatory proteins, gntR family VIBHAR_02930 PF06450 Bacterial Na+/H+ antiporter B (NhaB) VIBHAR_02931 PF02600 Disulfide bond formation protein DsbB VIBHAR_02932 PF02810 SEC-C motif VIBHAR_02932 PF01043 SecA preprotein cross-linking domain VIBHAR_02932 PF07516 SecA Wing and Scaffold domain VIBHAR_02932 PF07517 SecA DEAD-like domain VIBHAR_02933 PF01207 Dihydrouridine synthase (Dus) VIBHAR_02934 PF00072 Response regulator receiver domain VIBHAR_02934 PF00990 Diguanylate cyclase, GGDEF domain VIBHAR_02937 PF00128 Alpha amylase, catalytic domain VIBHAR_02937 PF02903 Alpha amylase, N-terminal ig-like domain VIBHAR_02938 PF00005 ABC transporter VIBHAR_02939 PF02653 Branched-chain amino acid transport system / permease component VIBHAR_02941 PF04217 Protein of unknown function, DUF412 VIBHAR_02942 PF00871 Acetokinase family VIBHAR_02943 PF01515 Phosphate acetyl/butaryl transferase VIBHAR_02943 PF07085 DRTGG domain VIBHAR_02944 PF13409 Glutathione S-transferase, N-terminal domain VIBHAR_02945 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VIBHAR_02945 PF00005 ABC transporter VIBHAR_02946 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VIBHAR_02946 PF00005 ABC transporter VIBHAR_02947 PF12911 N-terminal TM domain of oligopeptide transport permease C VIBHAR_02947 PF00528 Binding-protein-dependent transport system inner membrane component VIBHAR_02948 PF00528 Binding-protein-dependent transport system inner membrane component VIBHAR_02949 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VIBHAR_02950 PF02391 MoaE protein VIBHAR_02951 PF02597 ThiS family VIBHAR_02952 PF01967 MoaC family VIBHAR_02953 PF00994 Probable molybdopterin binding domain VIBHAR_02954 PF04055 Radical SAM superfamily VIBHAR_02954 PF06463 Molybdenum Cofactor Synthesis C VIBHAR_02955 PF01933 Uncharacterised protein family UPF0052 VIBHAR_02956 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_02956 PF13007 Transposase C of IS166 homeodomain VIBHAR_02956 PF13817 IS66 C-terminal element VIBHAR_02956 PF03050 Transposase IS66 family VIBHAR_02958 PF01627 Hpt domain VIBHAR_02959 PF00072 Response regulator receiver domain VIBHAR_02959 PF00158 Sigma-54 interaction domain VIBHAR_02959 PF02954 Bacterial regulatory protein, Fis family VIBHAR_02961 PF17757 UvrB interaction domain VIBHAR_02961 PF12344 Ultra-violet resistance protein B VIBHAR_02961 PF02151 UvrB/uvrC motif VIBHAR_02961 PF04851 Type III restriction enzyme, res subunit VIBHAR_02961 PF00271 Helicase conserved C-terminal domain VIBHAR_02963 PF01228 Glycine radical VIBHAR_02963 PF02901 Pyruvate formate lyase-like VIBHAR_02964 PF02508 Rnf-Nqr subunit, membrane protein VIBHAR_02965 PF04060 Putative Fe-S cluster VIBHAR_02966 PF10531 SLBB domain VIBHAR_02966 PF13375 RnfC Barrel sandwich hybrid domain VIBHAR_02966 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit VIBHAR_02966 PF12838 4Fe-4S dicluster domain VIBHAR_02967 PF03116 NQR2, RnfD, RnfE family VIBHAR_02968 PF04205 FMN-binding domain VIBHAR_02969 PF02508 Rnf-Nqr subunit, membrane protein VIBHAR_02970 PF10576 Iron-sulfur binding domain of endonuclease III VIBHAR_02970 PF00633 Helix-hairpin-helix motif VIBHAR_02970 PF00730 HhH-GPD superfamily base excision DNA repair protein VIBHAR_02974 PF13006 Insertion element 4 transposase N-terminal VIBHAR_02974 PF01609 Transposase DDE domain VIBHAR_02975 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) VIBHAR_02979 PF13007 Transposase C of IS166 homeodomain VIBHAR_02979 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_02979 PF13817 IS66 C-terminal element VIBHAR_02979 PF03050 Transposase IS66 family VIBHAR_02986 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBHAR_02987 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) VIBHAR_02988 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VIBHAR_02989 PF10952 Protein of unknown function (DUF2753) VIBHAR_02990 PF00691 OmpA family VIBHAR_02990 PF18393 MotY N-terminal domain VIBHAR_02991 PF00929 Exonuclease VIBHAR_02993 PF03553 Na+/H+ antiporter family VIBHAR_02993 PF13726 Na+-H+ antiporter family VIBHAR_03001 PF03135 CagE, TrbE, VirB family, component of type IV transporter system VIBHAR_03002 PF13737 Transposase DDE domain VIBHAR_03003 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_03003 PF13007 Transposase C of IS166 homeodomain VIBHAR_03003 PF03050 Transposase IS66 family VIBHAR_03003 PF13817 IS66 C-terminal element VIBHAR_03006 PF00990 Diguanylate cyclase, GGDEF domain VIBHAR_03006 PF00072 Response regulator receiver domain VIBHAR_03010 PF00140 Sigma-70 factor, region 1.2 VIBHAR_03010 PF04545 Sigma-70, region 4 VIBHAR_03010 PF04542 Sigma-70 region 2 VIBHAR_03010 PF04539 Sigma-70 region 3 VIBHAR_03012 PF13737 Transposase DDE domain VIBHAR_03013 PF00462 Glutaredoxin VIBHAR_03014 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain VIBHAR_03014 PF02777 Iron/manganese superoxide dismutases, C-terminal domain VIBHAR_03017 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) VIBHAR_03018 PF00171 Aldehyde dehydrogenase family VIBHAR_03018 PF00465 Iron-containing alcohol dehydrogenase VIBHAR_03019 PF01914 MarC family integral membrane protein VIBHAR_03020 PF00027 Cyclic nucleotide-binding domain VIBHAR_03020 PF00520 Ion transport protein VIBHAR_03021 PF01118 Semialdehyde dehydrogenase, NAD binding domain VIBHAR_03021 PF02774 Semialdehyde dehydrogenase, dimerisation domain VIBHAR_03022 PF03553 Na+/H+ antiporter family VIBHAR_03025 PF13006 Insertion element 4 transposase N-terminal VIBHAR_03025 PF01609 Transposase DDE domain VIBHAR_03026 PF04245 37-kD nucleoid-associated bacterial protein VIBHAR_03027 PF07208 Protein of unknown function (DUF1414) VIBHAR_03028 PF11893 Domain of unknown function (DUF3413) VIBHAR_03028 PF00884 Sulfatase VIBHAR_03030 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) VIBHAR_03031 PF01609 Transposase DDE domain VIBHAR_03031 PF13006 Insertion element 4 transposase N-terminal VIBHAR_03033 PF05987 Bacterial protein of unknown function (DUF898) VIBHAR_03035 PF00850 Histone deacetylase domain VIBHAR_03037 PF00106 short chain dehydrogenase VIBHAR_03041 PF01751 Toprim domain VIBHAR_03041 PF01131 DNA topoisomerase VIBHAR_03042 PF00881 Nitroreductase family VIBHAR_03043 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VIBHAR_03043 PF07992 Pyridine nucleotide-disulphide oxidoreductase VIBHAR_03044 PF01343 Peptidase family S49 VIBHAR_03045 PF00710 Asparaginase, N-terminal VIBHAR_03045 PF17763 Glutaminase/Asparaginase C-terminal domain VIBHAR_03046 PF07023 Protein of unknown function (DUF1315) VIBHAR_03048 PF01641 SelR domain VIBHAR_03049 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VIBHAR_03049 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VIBHAR_03050 PF01263 Aldose 1-epimerase VIBHAR_03052 PF01156 Inosine-uridine preferring nucleoside hydrolase VIBHAR_03053 PF13847 Methyltransferase domain VIBHAR_03056 PF02028 BCCT, betaine/carnitine/choline family transporter VIBHAR_03057 PF00245 Alkaline phosphatase VIBHAR_03058 PF13276 HTH-like domain VIBHAR_03058 PF13333 Integrase core domain VIBHAR_03058 PF00665 Integrase core domain VIBHAR_03060 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VIBHAR_03062 PF05552 Conserved TM helix VIBHAR_03062 PF00924 Mechanosensitive ion channel VIBHAR_03063 PF00282 Pyridoxal-dependent decarboxylase conserved domain VIBHAR_03065 PF06826 Predicted Permease Membrane Region VIBHAR_03066 PF04226 Transglycosylase associated protein VIBHAR_03078 PF03692 Putative zinc- or iron-chelating domain VIBHAR_03079 PF03692 Putative zinc- or iron-chelating domain VIBHAR_03080 PF08348 YheO-like PAS domain VIBHAR_03080 PF13309 HTH domain VIBHAR_03081 PF03313 Serine dehydratase alpha chain VIBHAR_03082 PF01042 Endoribonuclease L-PSP VIBHAR_03084 PF00230 Major intrinsic protein VIBHAR_03085 PF02132 RecR protein VIBHAR_03085 PF13662 Toprim domain VIBHAR_03086 PF02575 YbaB/EbfC DNA-binding family VIBHAR_03087 PF12170 DNA polymerase III tau subunit V interacting with alpha VIBHAR_03087 PF12169 DNA polymerase III subunits gamma and tau domain III VIBHAR_03088 PF00156 Phosphoribosyl transferase domain VIBHAR_03089 PF04304 Protein of unknown function (DUF454) VIBHAR_03091 PF00072 Response regulator receiver domain VIBHAR_03092 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBHAR_03092 PF03466 LysR substrate binding domain VIBHAR_03093 PF13006 Insertion element 4 transposase N-terminal VIBHAR_03093 PF01609 Transposase DDE domain VIBHAR_03095 PF00156 Phosphoribosyl transferase domain VIBHAR_03096 PF02674 Colicin V production protein VIBHAR_03097 PF05036 Sporulation related domain VIBHAR_03098 PF02875 Mur ligase family, glutamate ligase domain VIBHAR_03098 PF08245 Mur ligase middle domain VIBHAR_03100 PF17848 Acetyl-coA carboxylase zinc finger domain VIBHAR_03100 PF01039 Carboxyl transferase domain VIBHAR_03101 PF01416 tRNA pseudouridine synthase VIBHAR_03103 PF01118 Semialdehyde dehydrogenase, NAD binding domain VIBHAR_03103 PF02774 Semialdehyde dehydrogenase, dimerisation domain VIBHAR_03104 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VIBHAR_03104 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VIBHAR_03104 PF11890 Domain of unknown function (DUF3410) VIBHAR_03105 PF00109 Beta-ketoacyl synthase, N-terminal domain VIBHAR_03105 PF02801 Beta-ketoacyl synthase, C-terminal domain VIBHAR_03106 PF05430 S-adenosyl-L-methionine-dependent methyltransferase VIBHAR_03106 PF01266 FAD dependent oxidoreductase VIBHAR_03110 PF08891 YfcL protein VIBHAR_03111 PF04315 Elongation factor P hydroxylase VIBHAR_03112 PF03458 UPF0126 domain VIBHAR_03113 PF14706 Transposase DNA-binding VIBHAR_03113 PF01609 Transposase DDE domain VIBHAR_03113 PF02281 Transposase Tn5 dimerisation domain VIBHAR_03114 PF01264 Chorismate synthase VIBHAR_03115 PF05175 Methyltransferase small domain VIBHAR_03116 PF01713 Smr domain VIBHAR_03117 PF00300 Histidine phosphatase superfamily (branch 1) VIBHAR_03118 PF05193 Peptidase M16 inactive domain VIBHAR_03118 PF00675 Insulinase (Peptidase family M16) VIBHAR_03118 PF16187 Middle or third domain of peptidase_M16 VIBHAR_03119 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) VIBHAR_03120 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VIBHAR_03120 PF00378 Enoyl-CoA hydratase/isomerase VIBHAR_03120 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VIBHAR_03121 PF00108 Thiolase, N-terminal domain VIBHAR_03121 PF02803 Thiolase, C-terminal domain VIBHAR_03122 PF04542 Sigma-70 region 2 VIBHAR_03122 PF08281 Sigma-70, region 4 VIBHAR_03124 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VIBHAR_03125 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VIBHAR_03126 PF04333 MlaA lipoprotein VIBHAR_03127 PF03918 Cytochrome C biogenesis protein VIBHAR_03128 PF03918 Cytochrome C biogenesis protein VIBHAR_03129 PF08534 Redoxin VIBHAR_03130 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal VIBHAR_03130 PF01578 Cytochrome C assembly protein VIBHAR_03131 PF03100 CcmE VIBHAR_03133 PF01578 Cytochrome C assembly protein VIBHAR_03134 PF03379 CcmB protein VIBHAR_03135 PF00005 ABC transporter VIBHAR_03137 PF01584 CheW-like domain VIBHAR_03139 PF13614 AAA domain VIBHAR_03140 PF01339 CheB methylesterase VIBHAR_03140 PF00072 Response regulator receiver domain VIBHAR_03141 PF01584 CheW-like domain VIBHAR_03141 PF01627 Hpt domain VIBHAR_03141 PF02895 Signal transducing histidine kinase, homodimeric domain VIBHAR_03141 PF07194 P2 response regulator binding domain VIBHAR_03141 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBHAR_03142 PF04344 Chemotaxis phosphatase, CheZ VIBHAR_03143 PF00072 Response regulator receiver domain VIBHAR_03144 PF04542 Sigma-70 region 2 VIBHAR_03144 PF04539 Sigma-70 region 3 VIBHAR_03144 PF04545 Sigma-70, region 4 VIBHAR_03145 PF10609 NUBPL iron-transfer P-loop NTPase VIBHAR_03146 PF00448 SRP54-type protein, GTPase domain VIBHAR_03147 PF00771 FHIPEP family VIBHAR_03148 PF01312 FlhB HrpN YscU SpaS Family VIBHAR_03149 PF01311 Bacterial export proteins, family 1 VIBHAR_03150 PF01313 Bacterial export proteins, family 3 VIBHAR_03151 PF00813 FliP family VIBHAR_03152 PF04347 Flagellar biosynthesis protein, FliO VIBHAR_03153 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term VIBHAR_03154 PF02154 Flagellar motor switch protein FliM VIBHAR_03154 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term VIBHAR_03159 PF18269 T3SS EscN ATPase C-terminal domain VIBHAR_03159 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VIBHAR_03161 PF14841 FliG middle domain VIBHAR_03161 PF01706 FliG C-terminal domain VIBHAR_03161 PF14842 FliG N-terminal domain VIBHAR_03162 PF01514 Secretory protein of YscJ/FliF family VIBHAR_03162 PF08345 Flagellar M-ring protein C-terminal VIBHAR_03163 PF02049 Flagellar hook-basal body complex protein FliE VIBHAR_03164 PF02954 Bacterial regulatory protein, Fis family VIBHAR_03164 PF00072 Response regulator receiver domain VIBHAR_03164 PF00158 Sigma-54 interaction domain VIBHAR_03165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBHAR_03165 PF00512 His Kinase A (phospho-acceptor) domain VIBHAR_03166 PF02954 Bacterial regulatory protein, Fis family VIBHAR_03166 PF00072 Response regulator receiver domain VIBHAR_03166 PF00158 Sigma-54 interaction domain VIBHAR_03167 PF02561 Flagellar protein FliS VIBHAR_03169 PF02465 Flagellar hook-associated protein 2 N-terminus VIBHAR_03169 PF07195 Flagellar hook-associated protein 2 C-terminus VIBHAR_03169 PF07196 Flagellin hook IN motif VIBHAR_03170 PF03646 FlaG protein VIBHAR_03171 PF07196 Flagellin hook IN motif VIBHAR_03171 PF00669 Bacterial flagellin N-terminal helical region VIBHAR_03171 PF00700 Bacterial flagellin C-terminal helical region VIBHAR_03172 PF02281 Transposase Tn5 dimerisation domain VIBHAR_03172 PF14706 Transposase DNA-binding VIBHAR_03172 PF01609 Transposase DDE domain VIBHAR_03173 PF07196 Flagellin hook IN motif VIBHAR_03173 PF00669 Bacterial flagellin N-terminal helical region VIBHAR_03173 PF00700 Bacterial flagellin C-terminal helical region VIBHAR_03174 PF00700 Bacterial flagellin C-terminal helical region VIBHAR_03174 PF07196 Flagellin hook IN motif VIBHAR_03174 PF00669 Bacterial flagellin N-terminal helical region VIBHAR_03176 PF01609 Transposase DDE domain VIBHAR_03176 PF02281 Transposase Tn5 dimerisation domain VIBHAR_03176 PF14706 Transposase DNA-binding VIBHAR_03177 PF04261 Dyp-type peroxidase family VIBHAR_03178 PF11143 Protein of unknown function (DUF2919) VIBHAR_03182 PF03960 ArsC family VIBHAR_03183 PF01546 Peptidase family M20/M25/M40 VIBHAR_03183 PF07687 Peptidase dimerisation domain VIBHAR_03187 PF00701 Dihydrodipicolinate synthetase family VIBHAR_03188 PF01842 ACT domain VIBHAR_03189 PF00578 AhpC/TSA family VIBHAR_03190 PF02281 Transposase Tn5 dimerisation domain VIBHAR_03190 PF01609 Transposase DDE domain VIBHAR_03190 PF14706 Transposase DNA-binding VIBHAR_03191 PF01594 AI-2E family transporter VIBHAR_03193 PF13181 Tetratricopeptide repeat VIBHAR_03193 PF01435 Peptidase family M48 VIBHAR_03194 PF03960 ArsC family VIBHAR_03195 PF03358 NADPH-dependent FMN reductase VIBHAR_03198 PF00860 Permease family VIBHAR_03200 PF00586 AIR synthase related protein, N-terminal domain VIBHAR_03200 PF02769 AIR synthase related protein, C-terminal domain VIBHAR_03201 PF00551 Formyl transferase VIBHAR_03202 PF13230 Glutamine amidotransferases class-II VIBHAR_03203 PF13580 SIS domain VIBHAR_03204 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VIBHAR_03204 PF09317 Domain of unknown function (DUF1974) VIBHAR_03204 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VIBHAR_03204 PF02770 Acyl-CoA dehydrogenase, middle domain VIBHAR_03210 PF00929 Exonuclease VIBHAR_03211 PF00075 RNase H VIBHAR_03212 PF08241 Methyltransferase domain VIBHAR_03213 PF16123 Hydroxyacylglutathione hydrolase C-terminus VIBHAR_03214 PF01464 Transglycosylase SLT domain VIBHAR_03214 PF01476 LysM domain VIBHAR_03218 PF00543 Nitrogen regulatory protein P-II VIBHAR_03219 PF00034 Cytochrome c VIBHAR_03220 PF11734 TilS substrate C-terminal domain VIBHAR_03220 PF09179 TilS substrate binding domain VIBHAR_03220 PF01171 PP-loop family VIBHAR_03221 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit VIBHAR_03222 PF14579 Helix-hairpin-helix motif VIBHAR_03222 PF17657 Bacterial DNA polymerase III alpha subunit finger domain VIBHAR_03222 PF02811 PHP domain VIBHAR_03222 PF07733 Bacterial DNA polymerase III alpha NTPase domain VIBHAR_03222 PF01336 OB-fold nucleic acid binding domain VIBHAR_03223 PF01351 Ribonuclease HII VIBHAR_03224 PF02684 Lipid-A-disaccharide synthetase VIBHAR_03225 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 VIBHAR_03225 PF00132 Bacterial transferase hexapeptide (six repeats) VIBHAR_03226 PF07977 FabA-like domain VIBHAR_03227 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD VIBHAR_03227 PF00132 Bacterial transferase hexapeptide (six repeats) VIBHAR_03228 PF03938 Outer membrane protein (OmpH-like) VIBHAR_03229 PF07244 Surface antigen variable number repeat VIBHAR_03229 PF01103 Surface antigen VIBHAR_03230 PF02163 Peptidase family M50 VIBHAR_03230 PF17820 PDZ domain VIBHAR_03231 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase VIBHAR_03231 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain VIBHAR_03231 PF13288 DXP reductoisomerase C-terminal domain VIBHAR_03233 PF01255 Putative undecaprenyl diphosphate synthase VIBHAR_03234 PF01765 Ribosome recycling factor VIBHAR_03235 PF00696 Amino acid kinase family VIBHAR_03236 PF00889 Elongation factor TS VIBHAR_03237 PF00318 Ribosomal protein S2 VIBHAR_03238 PF00557 Metallopeptidase family M24 VIBHAR_03239 PF01842 ACT domain VIBHAR_03239 PF01966 HD domain VIBHAR_03239 PF01909 Nucleotidyltransferase domain VIBHAR_03239 PF08335 GlnD PII-uridylyltransferase VIBHAR_03240 PF11944 Protein of unknown function (DUF3461) VIBHAR_03241 PF00849 RNA pseudouridylate synthase VIBHAR_03243 PF04287 tRNA pseudouridine synthase C VIBHAR_03247 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 VIBHAR_03248 PF03806 AbgT putative transporter family VIBHAR_03249 PF00444 Ribosomal protein L36 VIBHAR_03250 PF01197 Ribosomal protein L31 VIBHAR_03251 PF18389 TrmO C-terminal domain VIBHAR_03251 PF01980 tRNA-methyltransferase O VIBHAR_03253 PF04073 Aminoacyl-tRNA editing domain VIBHAR_03253 PF03129 Anticodon binding domain VIBHAR_03253 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VIBHAR_03255 PF06786 Uncharacterised protein family (UPF0253) VIBHAR_03257 PF00209 Sodium:neurotransmitter symporter family VIBHAR_03258 PF00041 Fibronectin type III domain VIBHAR_03258 PF00704 Glycosyl hydrolases family 18 VIBHAR_03259 PF13006 Insertion element 4 transposase N-terminal VIBHAR_03259 PF01609 Transposase DDE domain VIBHAR_03261 PF03449 Transcription elongation factor, N-terminal VIBHAR_03261 PF01272 Transcription elongation factor, GreA/GreB, C-term VIBHAR_03262 PF16124 RecQ zinc-binding VIBHAR_03262 PF00271 Helicase conserved C-terminal domain VIBHAR_03262 PF00570 HRDC domain VIBHAR_03262 PF00270 DEAD/DEAH box helicase VIBHAR_03262 PF09382 RQC domain VIBHAR_03264 PF11798 IMS family HHH motif VIBHAR_03264 PF11799 impB/mucB/samB family C-terminal domain VIBHAR_03264 PF00817 impB/mucB/samB family VIBHAR_03265 PF00990 Diguanylate cyclase, GGDEF domain VIBHAR_03265 PF00072 Response regulator receiver domain VIBHAR_03266 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) VIBHAR_03267 PF14706 Transposase DNA-binding VIBHAR_03267 PF01609 Transposase DDE domain VIBHAR_03267 PF02281 Transposase Tn5 dimerisation domain VIBHAR_03269 PF02424 ApbE family VIBHAR_03270 PF00175 Oxidoreductase NAD-binding domain VIBHAR_03270 PF00970 Oxidoreductase FAD-binding domain VIBHAR_03270 PF00111 2Fe-2S iron-sulfur cluster binding domain VIBHAR_03271 PF02508 Rnf-Nqr subunit, membrane protein VIBHAR_03272 PF02508 Rnf-Nqr subunit, membrane protein VIBHAR_03273 PF04205 FMN-binding domain VIBHAR_03274 PF03116 NQR2, RnfD, RnfE family VIBHAR_03275 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) VIBHAR_03275 PF11973 NQRA C-terminal domain VIBHAR_03276 PF01722 BolA-like protein VIBHAR_03277 PF05175 Methyltransferase small domain VIBHAR_03279 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD VIBHAR_03281 PF07690 Major Facilitator Superfamily VIBHAR_03284 PF04545 Sigma-70, region 4 VIBHAR_03284 PF04542 Sigma-70 region 2 VIBHAR_03287 PF03502 Nucleoside-specific channel-forming protein, Tsx VIBHAR_03288 PF08546 Ketopantoate reductase PanE/ApbA C terminal VIBHAR_03288 PF02558 Ketopantoate reductase PanE/ApbA VIBHAR_03289 PF01965 DJ-1/PfpI family VIBHAR_03290 PF00266 Aminotransferase class-V VIBHAR_03291 PF02657 Fe-S metabolism associated domain VIBHAR_03292 PF00899 ThiF family VIBHAR_03293 PF06725 3D domain VIBHAR_03293 PF03562 MltA specific insert domain VIBHAR_03295 PF00583 Acetyltransferase (GNAT) family VIBHAR_03295 PF00696 Amino acid kinase family VIBHAR_03297 PF13006 Insertion element 4 transposase N-terminal VIBHAR_03297 PF01609 Transposase DDE domain VIBHAR_03300 PF13538 UvrD-like helicase C-terminal domain VIBHAR_03301 PF12705 PD-(D/E)XK nuclease superfamily VIBHAR_03301 PF13361 UvrD-like helicase C-terminal domain VIBHAR_03301 PF00580 UvrD/REP helicase N-terminal domain VIBHAR_03302 PF17946 RecC C-terminal domain VIBHAR_03303 PF00884 Sulfatase VIBHAR_03303 PF11893 Domain of unknown function (DUF3413) VIBHAR_03305 PF03466 LysR substrate binding domain VIBHAR_03305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBHAR_03306 PF07130 YebG protein VIBHAR_03309 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle VIBHAR_03309 PF14602 Hexapeptide repeat of succinyl-transferase VIBHAR_03310 PF03009 Glycerophosphoryl diester phosphodiesterase family VIBHAR_03311 PF07690 Major Facilitator Superfamily VIBHAR_03312 PF00230 Major intrinsic protein VIBHAR_03313 PF00370 FGGY family of carbohydrate kinases, N-terminal domain VIBHAR_03313 PF02782 FGGY family of carbohydrate kinases, C-terminal domain VIBHAR_03314 PF08220 DeoR-like helix-turn-helix domain VIBHAR_03314 PF00455 DeoR C terminal sensor domain VIBHAR_03315 PF16901 C-terminal domain of alpha-glycerophosphate oxidase VIBHAR_03315 PF01266 FAD dependent oxidoreductase VIBHAR_03316 PF01464 Transglycosylase SLT domain VIBHAR_03316 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain VIBHAR_03319 PF01588 Putative tRNA binding domain VIBHAR_03321 PF01588 Putative tRNA binding domain VIBHAR_03324 PF02378 Phosphotransferase system, EIIC VIBHAR_03324 PF00367 phosphotransferase system, EIIB VIBHAR_03325 PF00356 Bacterial regulatory proteins, lacI family VIBHAR_03326 PF01263 Aldose 1-epimerase VIBHAR_03327 PF10509 Galactokinase galactose-binding signature VIBHAR_03327 PF08544 GHMP kinases C terminal VIBHAR_03327 PF00288 GHMP kinases N terminal domain VIBHAR_03329 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain VIBHAR_03329 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain VIBHAR_03330 PF01548 Transposase VIBHAR_03330 PF02371 Transposase IS116/IS110/IS902 family VIBHAR_03331 PF16363 GDP-mannose 4,6 dehydratase VIBHAR_03333 PF03717 Penicillin-binding Protein dimerisation domain VIBHAR_03333 PF00905 Penicillin binding protein transpeptidase domain VIBHAR_03334 PF00356 Bacterial regulatory proteins, lacI family VIBHAR_03337 PF02836 Glycosyl hydrolases family 2, TIM barrel domain VIBHAR_03337 PF02837 Glycosyl hydrolases family 2, sugar binding domain VIBHAR_03337 PF16353 Domain of unknown function(DUF4981) VIBHAR_03337 PF02929 Beta galactosidase small chain VIBHAR_03337 PF00703 Glycosyl hydrolases family 2 VIBHAR_03338 PF04074 YhcH/YjgK/YiaL VIBHAR_03339 PF13520 Amino acid permease VIBHAR_03340 PF03466 LysR substrate binding domain VIBHAR_03340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBHAR_03342 PF05736 OprF membrane domain VIBHAR_03342 PF00691 OmpA family VIBHAR_03350 PF00437 Type II/IV secretion system protein VIBHAR_03353 PF13629 Pilus formation protein N terminal region VIBHAR_03353 PF00263 Bacterial type II and III secretion system protein VIBHAR_03353 PF04972 BON domain VIBHAR_03357 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_03357 PF13007 Transposase C of IS166 homeodomain VIBHAR_03357 PF13817 IS66 C-terminal element VIBHAR_03357 PF03050 Transposase IS66 family VIBHAR_03361 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBHAR_03361 PF03466 LysR substrate binding domain VIBHAR_03362 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain VIBHAR_03362 PF01464 Transglycosylase SLT domain VIBHAR_03363 PF00501 AMP-binding enzyme VIBHAR_03369 PF03144 Elongation factor Tu domain 2 VIBHAR_03369 PF00009 Elongation factor Tu GTP binding domain VIBHAR_03369 PF00679 Elongation factor G C-terminus VIBHAR_03369 PF03764 Elongation factor G, domain IV VIBHAR_03369 PF14492 Elongation Factor G, domain II VIBHAR_03370 PF18073 Rubredoxin metal binding domain VIBHAR_03372 PF18429 Domain of unknown function (DUF5609) VIBHAR_03374 PF01048 Phosphorylase superfamily VIBHAR_03375 PF01676 Metalloenzyme superfamily VIBHAR_03376 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain VIBHAR_03376 PF00591 Glycosyl transferase family, a/b domain VIBHAR_03376 PF02885 Glycosyl transferase family, helical bundle domain VIBHAR_03377 PF01791 DeoC/LacD family aldolase VIBHAR_03378 PF01773 Na+ dependent nucleoside transporter N-terminus VIBHAR_03378 PF07662 Na+ dependent nucleoside transporter C-terminus VIBHAR_03378 PF07670 Nucleoside recognition VIBHAR_03379 PF01026 TatD related DNase VIBHAR_03381 PF16658 Class II release factor RF3, C-terminal domain VIBHAR_03381 PF00009 Elongation factor Tu GTP binding domain VIBHAR_03381 PF03144 Elongation factor Tu domain 2 VIBHAR_03385 PF13508 Acetyltransferase (GNAT) domain VIBHAR_03387 PF00990 Diguanylate cyclase, GGDEF domain VIBHAR_03387 PF00563 EAL domain VIBHAR_03387 PF03707 Bacterial signalling protein N terminal repeat VIBHAR_03390 PF01554 MatE VIBHAR_03392 PF07719 Tetratricopeptide repeat VIBHAR_03392 PF13181 Tetratricopeptide repeat VIBHAR_03393 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain VIBHAR_03393 PF03725 3' exoribonuclease family, domain 2 VIBHAR_03393 PF00575 S1 RNA binding domain VIBHAR_03393 PF00013 KH domain VIBHAR_03393 PF01138 3' exoribonuclease family, domain 1 VIBHAR_03394 PF16198 tRNA pseudouridylate synthase B C-terminal domain VIBHAR_03394 PF01509 TruB family pseudouridylate synthase (N terminal domain) VIBHAR_03394 PF09157 Pseudouridine synthase II TruB, C-terminal VIBHAR_03395 PF02033 Ribosome-binding factor A VIBHAR_03396 PF08364 Bacterial translation initiation factor IF-2 associated region VIBHAR_03396 PF11987 Translation-initiation factor 2 VIBHAR_03396 PF00009 Elongation factor Tu GTP binding domain VIBHAR_03396 PF04760 Translation initiation factor IF-2, N-terminal region VIBHAR_03397 PF00575 S1 RNA binding domain VIBHAR_03397 PF13184 NusA-like KH domain VIBHAR_03397 PF08529 NusA N-terminal domain VIBHAR_03398 PF02576 RimP N-terminal domain VIBHAR_03398 PF17384 RimP C-terminal SH3 domain VIBHAR_03401 PF03840 Preprotein translocase SecG subunit VIBHAR_03402 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VIBHAR_03402 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VIBHAR_03402 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VIBHAR_03402 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VIBHAR_03403 PF00809 Pterin binding enzyme VIBHAR_03404 PF01434 Peptidase family M41 VIBHAR_03404 PF00004 ATPase family associated with various cellular activities (AAA) VIBHAR_03404 PF06480 FtsH Extracellular VIBHAR_03404 PF17862 AAA+ lid domain VIBHAR_03405 PF01728 FtsJ-like methyltransferase VIBHAR_03406 PF01985 CRS1 / YhbY (CRM) domain VIBHAR_03407 PF03449 Transcription elongation factor, N-terminal VIBHAR_03407 PF01272 Transcription elongation factor, GreA/GreB, C-term VIBHAR_03408 PF13609 Gram-negative porin VIBHAR_03409 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family VIBHAR_03412 PF00579 tRNA synthetases class I (W and Y) VIBHAR_03413 PF01551 Peptidase family M23 VIBHAR_03413 PF01476 LysM domain VIBHAR_03413 PF08525 Opacity-associated protein A N-terminal motif VIBHAR_03414 PF00873 AcrB/AcrD/AcrF family VIBHAR_03415 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VIBHAR_03416 PF01521 Iron-sulphur cluster biosynthesis VIBHAR_03417 PF00202 Aminotransferase class-III VIBHAR_03420 PF01594 AI-2E family transporter VIBHAR_03421 PF08468 Methyltransferase small domain N-terminal VIBHAR_03421 PF05175 Methyltransferase small domain VIBHAR_03422 PF00512 His Kinase A (phospho-acceptor) domain VIBHAR_03422 PF00072 Response regulator receiver domain VIBHAR_03422 PF00497 Bacterial extracellular solute-binding proteins, family 3 VIBHAR_03422 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBHAR_03423 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VIBHAR_03424 PF00528 Binding-protein-dependent transport system inner membrane component VIBHAR_03425 PF12911 N-terminal TM domain of oligopeptide transport permease C VIBHAR_03425 PF00528 Binding-protein-dependent transport system inner membrane component VIBHAR_03426 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VIBHAR_03426 PF00005 ABC transporter VIBHAR_03427 PF00005 ABC transporter VIBHAR_03427 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VIBHAR_03429 PF01869 BadF/BadG/BcrA/BcrD ATPase family VIBHAR_03430 PF00728 Glycosyl hydrolase family 20, catalytic domain VIBHAR_03430 PF02838 Glycosyl hydrolase family 20, domain 2 VIBHAR_03431 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain VIBHAR_03431 PF06165 Glycosyltransferase family 36 VIBHAR_03432 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VIBHAR_03432 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VIBHAR_03432 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VIBHAR_03432 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VIBHAR_03433 PF00005 ABC transporter VIBHAR_03433 PF08402 TOBE domain VIBHAR_03435 PF13416 Bacterial extracellular solute-binding protein VIBHAR_03436 PF00909 Ammonium Transporter Family VIBHAR_03437 PF00543 Nitrogen regulatory protein P-II VIBHAR_03438 PF06062 Uncharacterised protein family (UPF0231) VIBHAR_03439 PF02371 Transposase IS116/IS110/IS902 family VIBHAR_03439 PF01548 Transposase VIBHAR_03440 PF11791 Aconitate B N-terminal domain VIBHAR_03440 PF06434 Aconitate hydratase 2 N-terminus VIBHAR_03440 PF00330 Aconitase family (aconitate hydratase) VIBHAR_03442 PF01734 Patatin-like phospholipase VIBHAR_03443 PF14814 Bifunctional transglycosylase second domain VIBHAR_03443 PF00912 Transglycosylase VIBHAR_03443 PF00905 Penicillin binding protein transpeptidase domain VIBHAR_03444 PF08482 ATP-dependent helicase C-terminal VIBHAR_03444 PF00271 Helicase conserved C-terminal domain VIBHAR_03444 PF04408 Helicase associated domain (HA2) VIBHAR_03444 PF00270 DEAD/DEAH box helicase VIBHAR_03445 PF17746 SfsA N-terminal OB domain VIBHAR_03445 PF03749 Sugar fermentation stimulation protein RE domain VIBHAR_03446 PF01258 Prokaryotic dksA/traR C4-type zinc finger VIBHAR_03447 PF00749 tRNA synthetases class I (E and Q), catalytic domain VIBHAR_03448 PF01743 Poly A polymerase head domain VIBHAR_03448 PF12627 Probable RNA and SrmB- binding site of polymerase A VIBHAR_03448 PF12626 Polymerase A arginine-rich C-terminus VIBHAR_03449 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) VIBHAR_03450 PF02548 Ketopantoate hydroxymethyltransferase VIBHAR_03451 PF02569 Pantoate-beta-alanine ligase VIBHAR_03452 PF03279 Bacterial lipid A biosynthesis acyltransferase VIBHAR_03454 PF01061 ABC-2 type transporter VIBHAR_03455 PF00005 ABC transporter VIBHAR_03456 PF00916 Sulfate permease family VIBHAR_03456 PF01740 STAS domain VIBHAR_03457 PF00484 Carbonic anhydrase VIBHAR_03458 PF00156 Phosphoribosyl transferase domain VIBHAR_03459 PF00440 Bacterial regulatory proteins, tetR family VIBHAR_03462 PF07992 Pyridine nucleotide-disulphide oxidoreductase VIBHAR_03462 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VIBHAR_03463 PF00364 Biotin-requiring enzyme VIBHAR_03463 PF02817 e3 binding domain VIBHAR_03463 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VIBHAR_03464 PF00456 Transketolase, thiamine diphosphate binding domain VIBHAR_03464 PF17831 Pyruvate dehydrogenase E1 component middle domain VIBHAR_03465 PF07729 FCD domain VIBHAR_03465 PF00392 Bacterial regulatory proteins, gntR family VIBHAR_03466 PF01510 N-acetylmuramoyl-L-alanine amidase VIBHAR_03467 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain VIBHAR_03467 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain VIBHAR_03469 PF00437 Type II/IV secretion system protein VIBHAR_03469 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain VIBHAR_03470 PF00482 Type II secretion system (T2SS), protein F VIBHAR_03471 PF06750 Bacterial Peptidase A24 N-terminal domain VIBHAR_03471 PF01478 Type IV leader peptidase family VIBHAR_03472 PF01121 Dephospho-CoA kinase VIBHAR_03473 PF07072 Cell division protein VIBHAR_03474 PF03884 DNA gyrase inhibitor YacG VIBHAR_03475 PF01548 Transposase VIBHAR_03475 PF02371 Transposase IS116/IS110/IS902 family VIBHAR_03476 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) VIBHAR_03477 PF01245 Ribosomal protein L19 VIBHAR_03478 PF01746 tRNA (Guanine-1)-methyltransferase VIBHAR_03479 PF01782 RimM N-terminal domain VIBHAR_03479 PF05239 PRC-barrel domain VIBHAR_03480 PF00886 Ribosomal protein S16 VIBHAR_03481 PF02978 Signal peptide binding domain VIBHAR_03481 PF02881 SRP54-type protein, helical bundle domain VIBHAR_03481 PF00448 SRP54-type protein, GTPase domain VIBHAR_03482 PF01578 Cytochrome C assembly protein VIBHAR_03483 PF03471 Transporter associated domain VIBHAR_03483 PF00571 CBS domain VIBHAR_03483 PF01595 Cyclin M transmembrane N-terminal domain VIBHAR_03484 PF02664 S-Ribosylhomocysteinase (LuxS) VIBHAR_03486 PF04262 Glutamate-cysteine ligase VIBHAR_03487 PF05193 Peptidase M16 inactive domain VIBHAR_03487 PF00675 Insulinase (Peptidase family M16) VIBHAR_03488 PF09335 SNARE associated Golgi protein VIBHAR_03490 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit VIBHAR_03491 PF00364 Biotin-requiring enzyme VIBHAR_03491 PF02436 Conserved carboxylase domain VIBHAR_03491 PF00682 HMGL-like VIBHAR_03492 PF04277 Oxaloacetate decarboxylase, gamma chain VIBHAR_03493 PF00196 Bacterial regulatory proteins, luxR family VIBHAR_03509 PF02599 Global regulator protein family VIBHAR_03510 PF13840 ACT domain VIBHAR_03510 PF01842 ACT domain VIBHAR_03510 PF00696 Amino acid kinase family VIBHAR_03511 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VIBHAR_03511 PF01411 tRNA synthetases class II (A) VIBHAR_03511 PF02272 DHHA1 domain VIBHAR_03512 PF02631 RecX family VIBHAR_03513 PF00154 recA bacterial DNA recombination protein VIBHAR_03514 PF02464 Competence-damaged protein VIBHAR_03515 PF00488 MutS domain V VIBHAR_03515 PF05190 MutS family domain IV VIBHAR_03515 PF01624 MutS domain I VIBHAR_03515 PF05188 MutS domain II VIBHAR_03515 PF05192 MutS domain III VIBHAR_03516 PF01609 Transposase DDE domain VIBHAR_03516 PF13006 Insertion element 4 transposase N-terminal VIBHAR_03517 PF00140 Sigma-70 factor, region 1.2 VIBHAR_03517 PF04539 Sigma-70 region 3 VIBHAR_03517 PF04545 Sigma-70, region 4 VIBHAR_03517 PF04542 Sigma-70 region 2 VIBHAR_03518 PF01476 LysM domain VIBHAR_03518 PF01551 Peptidase family M23 VIBHAR_03520 PF01975 Survival protein SurE VIBHAR_03521 PF01142 tRNA pseudouridine synthase D (TruD) VIBHAR_03522 PF02542 YgbB family VIBHAR_03523 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase VIBHAR_03524 PF04977 Septum formation initiator VIBHAR_03525 PF03952 Enolase, N-terminal domain VIBHAR_03525 PF00113 Enolase, C-terminal TIM barrel domain VIBHAR_03526 PF00117 Glutamine amidotransferase class-I VIBHAR_03526 PF06418 CTP synthase N-terminus VIBHAR_03527 PF03819 MazG nucleotide pyrophosphohydrolase domain VIBHAR_03528 PF13291 ACT domain VIBHAR_03528 PF02824 TGS domain VIBHAR_03528 PF04607 Region found in RelA / SpoT proteins VIBHAR_03529 PF01938 TRAM domain VIBHAR_03529 PF05958 tRNA (Uracil-5-)-methyltransferase VIBHAR_03530 PF00672 HAMP domain VIBHAR_03530 PF00072 Response regulator receiver domain VIBHAR_03530 PF00512 His Kinase A (phospho-acceptor) domain VIBHAR_03530 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VIBHAR_03530 PF01627 Hpt domain VIBHAR_03530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBHAR_03531 PF13006 Insertion element 4 transposase N-terminal VIBHAR_03531 PF01609 Transposase DDE domain VIBHAR_03532 PF01648 4'-phosphopantetheinyl transferase superfamily VIBHAR_03533 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ VIBHAR_03534 PF11967 Recombination protein O N terminal VIBHAR_03534 PF02565 Recombination protein O C terminal VIBHAR_03535 PF01926 50S ribosome-binding GTPase VIBHAR_03535 PF07650 KH domain VIBHAR_03536 PF00035 Double-stranded RNA binding motif VIBHAR_03536 PF14622 Ribonuclease-III-like VIBHAR_03537 PF10502 Signal peptidase, peptidase S26 VIBHAR_03538 PF00009 Elongation factor Tu GTP binding domain VIBHAR_03538 PF00679 Elongation factor G C-terminus VIBHAR_03538 PF06421 GTP-binding protein LepA C-terminus VIBHAR_03538 PF03144 Elongation factor Tu domain 2 VIBHAR_03540 PF03888 MucB/RseB N-terminal domain VIBHAR_03540 PF17188 MucB/RseB C-terminal domain VIBHAR_03541 PF03873 Anti sigma-E protein RseA, C-terminal domain VIBHAR_03541 PF03872 Anti sigma-E protein RseA, N-terminal domain VIBHAR_03542 PF08281 Sigma-70, region 4 VIBHAR_03542 PF04542 Sigma-70 region 2 VIBHAR_03543 PF02910 Fumarate reductase flavoprotein C-term VIBHAR_03543 PF00890 FAD binding domain VIBHAR_03545 PF03937 Flavinator of succinate dehydrogenase VIBHAR_03549 PF01494 FAD binding domain VIBHAR_03550 PF01494 FAD binding domain VIBHAR_03551 PF03695 Uncharacterised protein family (UPF0149) VIBHAR_03552 PF05164 Cell division protein ZapA VIBHAR_03554 PF01812 5-formyltetrahydrofolate cyclo-ligase family VIBHAR_03555 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) VIBHAR_03556 PF01842 ACT domain VIBHAR_03556 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VIBHAR_03556 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VIBHAR_03557 PF04402 Protein of unknown function (DUF541) VIBHAR_03558 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBHAR_03558 PF03466 LysR substrate binding domain VIBHAR_03559 PF01810 LysE type translocator VIBHAR_03562 PF00924 Mechanosensitive ion channel VIBHAR_03562 PF05552 Conserved TM helix VIBHAR_03564 PF01116 Fructose-bisphosphate aldolase class-II VIBHAR_03565 PF00162 Phosphoglycerate kinase VIBHAR_03566 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VIBHAR_03566 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VIBHAR_03567 PF02780 Transketolase, C-terminal domain VIBHAR_03567 PF00456 Transketolase, thiamine diphosphate binding domain VIBHAR_03567 PF02779 Transketolase, pyrimidine binding domain VIBHAR_03568 PF00438 S-adenosylmethionine synthetase, N-terminal domain VIBHAR_03568 PF02773 S-adenosylmethionine synthetase, C-terminal domain VIBHAR_03568 PF02772 S-adenosylmethionine synthetase, central domain VIBHAR_03570 PF17283 SprT-like zinc ribbon domain VIBHAR_03570 PF10263 SprT-like family VIBHAR_03571 PF04231 Endonuclease I VIBHAR_03572 PF04452 RNA methyltransferase VIBHAR_03573 PF02951 Prokaryotic glutathione synthetase, N-terminal domain VIBHAR_03573 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain VIBHAR_03574 PF02622 Uncharacterized ACR, COG1678 VIBHAR_03575 PF03652 Holliday junction resolvase VIBHAR_03576 PF00437 Type II/IV secretion system protein VIBHAR_03577 PF00437 Type II/IV secretion system protein VIBHAR_03578 PF01168 Alanine racemase, N-terminal domain VIBHAR_03579 PF03807 NADP oxidoreductase coenzyme F420-dependent VIBHAR_03579 PF14748 Pyrroline-5-carboxylate reductase dimerisation VIBHAR_03580 PF02325 YGGT family VIBHAR_03581 PF02594 Uncharacterised ACR, YggU family COG1872 VIBHAR_03583 PF01725 Ham1 family VIBHAR_03584 PF04055 Radical SAM superfamily VIBHAR_03584 PF06969 HemN C-terminal domain VIBHAR_03586 PF14706 Transposase DNA-binding VIBHAR_03586 PF02281 Transposase Tn5 dimerisation domain VIBHAR_03586 PF01609 Transposase DDE domain VIBHAR_03588 PF04960 Glutaminase VIBHAR_03589 PF02086 D12 class N6 adenine-specific DNA methyltransferase VIBHAR_03590 PF02390 Putative methyltransferase VIBHAR_03591 PF00633 Helix-hairpin-helix motif VIBHAR_03591 PF14815 NUDIX domain VIBHAR_03591 PF00730 HhH-GPD superfamily base excision DNA repair protein VIBHAR_03592 PF04362 Bacterial Fe(2+) trafficking VIBHAR_03593 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain VIBHAR_03593 PF01464 Transglycosylase SLT domain VIBHAR_03608 PF00171 Aldehyde dehydrogenase family VIBHAR_03619 PF00072 Response regulator receiver domain VIBHAR_03621 PF04794 YdjC-like protein VIBHAR_03622 PF11975 Family 4 glycosyl hydrolase C-terminal domain VIBHAR_03622 PF02056 Family 4 glycosyl hydrolase VIBHAR_03623 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit VIBHAR_03624 PF02378 Phosphotransferase system, EIIC VIBHAR_03625 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VIBHAR_03626 PF01522 Polysaccharide deacetylase VIBHAR_03631 PF00106 short chain dehydrogenase VIBHAR_03633 PF03739 Lipopolysaccharide export system permease LptF/LptG VIBHAR_03634 PF03739 Lipopolysaccharide export system permease LptF/LptG VIBHAR_03635 PF00883 Cytosol aminopeptidase family, catalytic domain VIBHAR_03635 PF02789 Cytosol aminopeptidase family, N-terminal domain VIBHAR_03636 PF04364 DNA polymerase III chi subunit, HolC VIBHAR_03637 PF08264 Anticodon-binding domain of tRNA VIBHAR_03637 PF10458 Valyl tRNA synthetase tRNA binding arm VIBHAR_03637 PF00133 tRNA synthetases class I (I, L, M and V) VIBHAR_03639 PF00583 Acetyltransferase (GNAT) family VIBHAR_03641 PF06877 Regulator of ribonuclease activity B VIBHAR_03645 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain VIBHAR_03645 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain VIBHAR_03647 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain VIBHAR_03647 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain VIBHAR_03648 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain VIBHAR_03648 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain VIBHAR_03649 PF01042 Endoribonuclease L-PSP VIBHAR_03650 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) VIBHAR_03651 PF01553 Acyltransferase VIBHAR_03652 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) VIBHAR_03653 PF01722 BolA-like protein VIBHAR_03655 PF05494 MlaC protein VIBHAR_03656 PF02470 MlaD protein VIBHAR_03657 PF02405 Permease MlaE VIBHAR_03658 PF00005 ABC transporter VIBHAR_03659 PF01699 Sodium/calcium exchanger protein VIBHAR_03660 PF00571 CBS domain VIBHAR_03660 PF01380 SIS domain VIBHAR_03662 PF03968 OstA-like protein VIBHAR_03663 PF00005 ABC transporter VIBHAR_03663 PF12399 Branched-chain amino acid ATP-binding cassette transporter VIBHAR_03664 PF00309 Sigma-54 factor, Activator interacting domain (AID) VIBHAR_03664 PF04963 Sigma-54 factor, core binding domain VIBHAR_03664 PF04552 Sigma-54, DNA binding domain VIBHAR_03665 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein VIBHAR_03666 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VIBHAR_03667 PF03668 P-loop ATPase protein family VIBHAR_03668 PF00381 PTS HPr component phosphorylation site VIBHAR_03669 PF01769 Divalent cation transporter VIBHAR_03669 PF03448 MgtE intracellular N domain VIBHAR_03669 PF00571 CBS domain VIBHAR_03670 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) VIBHAR_03671 PF01523 Putative modulator of DNA gyrase VIBHAR_03672 PF04751 Protein of unknown function (DUF615) VIBHAR_03673 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VIBHAR_03673 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VIBHAR_03674 PF00849 RNA pseudouridylate synthase VIBHAR_03676 PF00271 Helicase conserved C-terminal domain VIBHAR_03676 PF12137 RNA polymerase recycling family C-terminal VIBHAR_03676 PF18337 RapA N-terminal Tudor like domain VIBHAR_03676 PF00176 SNF2 family N-terminal domain VIBHAR_03676 PF18339 RapA N-terminal Tudor like domain 1 VIBHAR_03677 PF13638 PIN domain VIBHAR_03677 PF02562 PhoH-like protein VIBHAR_03678 PF01523 Putative modulator of DNA gyrase VIBHAR_03679 PF00795 Carbon-nitrogen hydrolase VIBHAR_03680 PF13502 AsmA-like C-terminal region VIBHAR_03680 PF13116 Protein of unknown function VIBHAR_03681 PF10150 Ribonuclease E/G family VIBHAR_03681 PF00575 S1 RNA binding domain VIBHAR_03682 PF02545 Maf-like protein VIBHAR_03683 PF04093 rod shape-determining protein MreD VIBHAR_03684 PF04085 rod shape-determining protein MreC VIBHAR_03694 PF00482 Type II secretion system (T2SS), protein F VIBHAR_03695 PF00437 Type II/IV secretion system protein VIBHAR_03695 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain VIBHAR_03697 PF13401 AAA domain VIBHAR_03697 PF01471 Putative peptidoglycan binding domain VIBHAR_03698 PF03958 Bacterial type II/III secretion system short domain VIBHAR_03698 PF00263 Bacterial type II and III secretion system protein VIBHAR_03702 PF00990 Diguanylate cyclase, GGDEF domain VIBHAR_03702 PF17157 Gammaproteobacterial periplasmic sensor domain VIBHAR_03702 PF00563 EAL domain VIBHAR_03703 PF01609 Transposase DDE domain VIBHAR_03703 PF02281 Transposase Tn5 dimerisation domain VIBHAR_03703 PF14706 Transposase DNA-binding VIBHAR_03704 PF01609 Transposase DDE domain VIBHAR_03704 PF02281 Transposase Tn5 dimerisation domain VIBHAR_03704 PF14706 Transposase DNA-binding VIBHAR_03705 PF00436 Single-strand binding protein family VIBHAR_03706 PF00196 Bacterial regulatory proteins, luxR family VIBHAR_03707 PF00483 Nucleotidyl transferase VIBHAR_03708 PF17760 UvrA interaction domain VIBHAR_03708 PF17755 UvrA DNA-binding domain VIBHAR_03708 PF00005 ABC transporter VIBHAR_03710 PF00266 Aminotransferase class-V VIBHAR_03711 PF01842 ACT domain VIBHAR_03711 PF00696 Amino acid kinase family VIBHAR_03712 PF02310 B12 binding domain VIBHAR_03712 PF02965 Vitamin B12 dependent methionine synthase, activation domain VIBHAR_03712 PF00809 Pterin binding enzyme VIBHAR_03712 PF02574 Homocysteine S-methyltransferase VIBHAR_03712 PF02607 B12 binding domain VIBHAR_03713 PF00999 Sodium/hydrogen exchanger family VIBHAR_03715 PF13358 DDE superfamily endonuclease VIBHAR_04729 PF04754 Putative transposase, YhgA-like VIBHAR_04739 PF18416 N-acetylglucosamine binding protein domain 2 VIBHAR_04739 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading VIBHAR_04740 PF13737 Transposase DDE domain VIBHAR_04743 PF01037 Lrp/AsnC ligand binding domain VIBHAR_04743 PF13404 AsnC-type helix-turn-helix domain VIBHAR_04744 PF01810 LysE type translocator VIBHAR_04745 PF06445 GyrI-like small molecule binding domain VIBHAR_04747 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBHAR_04747 PF00672 HAMP domain VIBHAR_04747 PF02743 Cache domain VIBHAR_04749 PF08220 DeoR-like helix-turn-helix domain VIBHAR_04749 PF00455 DeoR C terminal sensor domain VIBHAR_04750 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VIBHAR_04750 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase VIBHAR_04751 PF17042 Nucleotide-binding C-terminal domain VIBHAR_04751 PF07005 Sugar-binding N-terminal domain VIBHAR_04752 PF00596 Class II Aldolase and Adducin N-terminal domain VIBHAR_04753 PF01261 Xylose isomerase-like TIM barrel VIBHAR_04754 PF02447 GntP family permease VIBHAR_04761 PF07992 Pyridine nucleotide-disulphide oxidoreductase VIBHAR_04761 PF13192 Thioredoxin domain VIBHAR_04762 PF10417 C-terminal domain of 1-Cys peroxiredoxin VIBHAR_04762 PF00578 AhpC/TSA family VIBHAR_04763 PF01047 MarR family VIBHAR_04764 PF02566 OsmC-like protein VIBHAR_04772 PF00005 ABC transporter VIBHAR_04773 PF00857 Isochorismatase family VIBHAR_04777 PF02525 Flavodoxin-like fold VIBHAR_04784 PF00672 HAMP domain VIBHAR_04784 PF02743 Cache domain VIBHAR_04784 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBHAR_04785 PF05193 Peptidase M16 inactive domain VIBHAR_04785 PF00675 Insulinase (Peptidase family M16) VIBHAR_04794 PF00577 Outer membrane usher protein VIBHAR_04794 PF13954 PapC N-terminal domain VIBHAR_04794 PF13953 PapC C-terminal domain VIBHAR_04795 PF02753 Pili assembly chaperone PapD, C-terminal domain VIBHAR_04795 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain VIBHAR_04800 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) VIBHAR_04803 PF13737 Transposase DDE domain VIBHAR_04804 PF00294 pfkB family carbohydrate kinase VIBHAR_04807 PF04225 Opacity-associated protein A LysM-like domain VIBHAR_04807 PF01551 Peptidase family M23 VIBHAR_04810 PF07690 Major Facilitator Superfamily VIBHAR_04812 PF00356 Bacterial regulatory proteins, lacI family VIBHAR_04813 PF00267 Gram-negative porin VIBHAR_04816 PF00474 Sodium:solute symporter family VIBHAR_04817 PF03313 Serine dehydratase alpha chain VIBHAR_04817 PF03315 Serine dehydratase beta chain VIBHAR_04820 PF00128 Alpha amylase, catalytic domain VIBHAR_04820 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) VIBHAR_04821 PF02264 LamB porin VIBHAR_04824 PF00128 Alpha amylase, catalytic domain VIBHAR_04824 PF02903 Alpha amylase, N-terminal ig-like domain VIBHAR_04827 PF04231 Endonuclease I VIBHAR_04828 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) VIBHAR_04828 PF11852 Domain of unknown function (DUF3372) VIBHAR_04828 PF18494 Pullulanase Ins domain VIBHAR_04828 PF17967 Pullulanase N2 domain VIBHAR_04828 PF03714 Bacterial pullanase-associated domain VIBHAR_04833 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain VIBHAR_04833 PF01276 Orn/Lys/Arg decarboxylase, major domain VIBHAR_04833 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain VIBHAR_04834 PF13520 Amino acid permease VIBHAR_04836 PF08543 Phosphomethylpyrimidine kinase VIBHAR_04838 PF00375 Sodium:dicarboxylate symporter family VIBHAR_04839 PF03193 RsgA GTPase VIBHAR_04840 PF00367 phosphotransferase system, EIIB VIBHAR_04840 PF02378 Phosphotransferase system, EIIC VIBHAR_04842 PF02630 SCO1/SenC VIBHAR_04848 PF00196 Bacterial regulatory proteins, luxR family VIBHAR_04848 PF17874 MalT-like TPR region VIBHAR_04849 PF00343 Carbohydrate phosphorylase VIBHAR_04850 PF02446 4-alpha-glucanotransferase VIBHAR_04851 PF00128 Alpha amylase, catalytic domain VIBHAR_04851 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) VIBHAR_04851 PF02806 Alpha amylase, C-terminal all-beta domain VIBHAR_04852 PF00912 Transglycosylase VIBHAR_04858 PF00128 Alpha amylase, catalytic domain VIBHAR_04863 PF07670 Nucleoside recognition VIBHAR_04864 PF07670 Nucleoside recognition VIBHAR_04865 PF01546 Peptidase family M20/M25/M40 VIBHAR_04865 PF07687 Peptidase dimerisation domain VIBHAR_04866 PF06803 Protein of unknown function (DUF1232) VIBHAR_04867 PF00375 Sodium:dicarboxylate symporter family VIBHAR_04868 PF13358 DDE superfamily endonuclease VIBHAR_04870 PF13006 Insertion element 4 transposase N-terminal VIBHAR_04870 PF01609 Transposase DDE domain VIBHAR_04871 PF00657 GDSL-like Lipase/Acylhydrolase VIBHAR_04874 PF13419 Haloacid dehalogenase-like hydrolase VIBHAR_04876 PF00266 Aminotransferase class-V VIBHAR_04880 PF00005 ABC transporter VIBHAR_04881 PF00528 Binding-protein-dependent transport system inner membrane component VIBHAR_04882 PF07702 UTRA domain VIBHAR_04882 PF00392 Bacterial regulatory proteins, gntR family VIBHAR_04886 PF04393 Protein of unknown function (DUF535) VIBHAR_04888 PF13006 Insertion element 4 transposase N-terminal VIBHAR_04888 PF01609 Transposase DDE domain VIBHAR_04889 PF01266 FAD dependent oxidoreductase VIBHAR_04891 PF00246 Zinc carboxypeptidase VIBHAR_04891 PF18027 Cytosolic carboxypeptidase N-terminal domain VIBHAR_04892 PF01389 OmpA-like transmembrane domain VIBHAR_04892 PF00691 OmpA family VIBHAR_04893 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBHAR_04893 PF03466 LysR substrate binding domain VIBHAR_04895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBHAR_04895 PF03466 LysR substrate binding domain VIBHAR_04897 PF01566 Natural resistance-associated macrophage protein VIBHAR_04898 PF00854 POT family VIBHAR_04899 PF03315 Serine dehydratase beta chain VIBHAR_04899 PF03313 Serine dehydratase alpha chain VIBHAR_04905 PF01476 LysM domain VIBHAR_04905 PF01464 Transglycosylase SLT domain VIBHAR_04909 PF00460 Flagella basal body rod protein VIBHAR_04910 PF00460 Flagella basal body rod protein VIBHAR_04910 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VIBHAR_04911 PF13861 FlgD Tudor-like domain VIBHAR_04911 PF13860 FlgD Ig-like domain VIBHAR_04911 PF03963 Flagellar hook capping protein - N-terminal region VIBHAR_04912 PF07559 Flagellar basal body protein FlaE VIBHAR_04912 PF00460 Flagella basal body rod protein VIBHAR_04912 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VIBHAR_04913 PF00460 Flagella basal body rod protein VIBHAR_04913 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VIBHAR_04914 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VIBHAR_04914 PF00460 Flagella basal body rod protein VIBHAR_04915 PF02107 Flagellar L-ring protein VIBHAR_04916 PF02119 Flagellar P-ring protein VIBHAR_04917 PF10135 Rod binding protein VIBHAR_04917 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase VIBHAR_04919 PF00700 Bacterial flagellin C-terminal helical region VIBHAR_04919 PF00669 Bacterial flagellin N-terminal helical region VIBHAR_04924 PF01070 FMN-dependent dehydrogenase VIBHAR_04926 PF00291 Pyridoxal-phosphate dependent enzyme VIBHAR_04927 PF01037 Lrp/AsnC ligand binding domain VIBHAR_04930 PF13358 DDE superfamily endonuclease VIBHAR_04931 PF01546 Peptidase family M20/M25/M40 VIBHAR_04931 PF07687 Peptidase dimerisation domain VIBHAR_04932 PF03480 Bacterial extracellular solute-binding protein, family 7 VIBHAR_04934 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VIBHAR_04935 PF01321 Creatinase/Prolidase N-terminal domain VIBHAR_04935 PF00557 Metallopeptidase family M24 VIBHAR_04942 PF08000 Bacterial PH domain VIBHAR_04947 PF02567 Phenazine biosynthesis-like protein VIBHAR_04949 PF13677 Membrane MotB of proton-channel complex MotA/MotB VIBHAR_04949 PF00691 OmpA family VIBHAR_04950 PF01618 MotA/TolQ/ExbB proton channel family VIBHAR_04951 PF04545 Sigma-70, region 4 VIBHAR_04951 PF04542 Sigma-70 region 2 VIBHAR_04952 PF03748 Flagellar basal body-associated protein FliL VIBHAR_04955 PF02561 Flagellar protein FliS VIBHAR_04956 PF02465 Flagellar hook-associated protein 2 N-terminus VIBHAR_04956 PF07196 Flagellin hook IN motif VIBHAR_04956 PF07195 Flagellar hook-associated protein 2 C-terminus VIBHAR_04959 PF14706 Transposase DNA-binding VIBHAR_04959 PF02281 Transposase Tn5 dimerisation domain VIBHAR_04959 PF01609 Transposase DDE domain VIBHAR_04961 PF00700 Bacterial flagellin C-terminal helical region VIBHAR_04961 PF00669 Bacterial flagellin N-terminal helical region VIBHAR_04963 PF00771 FHIPEP family VIBHAR_04964 PF01312 FlhB HrpN YscU SpaS Family VIBHAR_04965 PF01311 Bacterial export proteins, family 1 VIBHAR_04966 PF01313 Bacterial export proteins, family 3 VIBHAR_04967 PF00813 FliP family VIBHAR_04968 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term VIBHAR_04971 PF00072 Response regulator receiver domain VIBHAR_04971 PF00158 Sigma-54 interaction domain VIBHAR_04971 PF02954 Bacterial regulatory protein, Fis family VIBHAR_04972 PF02049 Flagellar hook-basal body complex protein FliE VIBHAR_04973 PF08345 Flagellar M-ring protein C-terminal VIBHAR_04973 PF01514 Secretory protein of YscJ/FliF family VIBHAR_04974 PF14842 FliG N-terminal domain VIBHAR_04974 PF01706 FliG C-terminal domain VIBHAR_04974 PF14841 FliG middle domain VIBHAR_04976 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VIBHAR_04976 PF18269 T3SS EscN ATPase C-terminal domain VIBHAR_04978 PF00563 EAL domain VIBHAR_04978 PF05231 MASE1 VIBHAR_04980 PF03466 LysR substrate binding domain VIBHAR_04980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBHAR_04988 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBHAR_04988 PF03466 LysR substrate binding domain VIBHAR_04992 PF00486 Transcriptional regulatory protein, C terminal VIBHAR_04992 PF00072 Response regulator receiver domain VIBHAR_04993 PF00072 Response regulator receiver domain VIBHAR_04993 PF13426 PAS domain VIBHAR_04993 PF08448 PAS fold VIBHAR_04993 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBHAR_04993 PF00512 His Kinase A (phospho-acceptor) domain VIBHAR_04996 PF00266 Aminotransferase class-V VIBHAR_04997 PF13006 Insertion element 4 transposase N-terminal VIBHAR_04997 PF01609 Transposase DDE domain VIBHAR_04999 PF03707 Bacterial signalling protein N terminal repeat VIBHAR_04999 PF00563 EAL domain VIBHAR_04999 PF00990 Diguanylate cyclase, GGDEF domain VIBHAR_05000 PF00155 Aminotransferase class I and II VIBHAR_05001 PF08240 Alcohol dehydrogenase GroES-like domain VIBHAR_05001 PF00107 Zinc-binding dehydrogenase VIBHAR_05002 PF00589 Phage integrase family VIBHAR_05002 PF02899 Phage integrase, N-terminal SAM-like domain VIBHAR_05012 PF06892 Phage regulatory protein CII (CP76) VIBHAR_05016 PF05840 Bacteriophage replication gene A protein (GPA) VIBHAR_05053 PF02371 Transposase IS116/IS110/IS902 family VIBHAR_05053 PF01548 Transposase VIBHAR_05061 PF08240 Alcohol dehydrogenase GroES-like domain VIBHAR_05061 PF00107 Zinc-binding dehydrogenase VIBHAR_05068 PF03050 Transposase IS66 family VIBHAR_05068 PF13007 Transposase C of IS166 homeodomain VIBHAR_05068 PF13817 IS66 C-terminal element VIBHAR_05068 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_05075 PF13007 Transposase C of IS166 homeodomain VIBHAR_05075 PF03050 Transposase IS66 family VIBHAR_05075 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_05075 PF13817 IS66 C-terminal element VIBHAR_05076 PF13358 DDE superfamily endonuclease VIBHAR_05078 PF05230 MASE2 domain VIBHAR_05078 PF00990 Diguanylate cyclase, GGDEF domain VIBHAR_05079 PF13358 DDE superfamily endonuclease VIBHAR_05080 PF13358 DDE superfamily endonuclease VIBHAR_05083 PF13358 DDE superfamily endonuclease VIBHAR_05086 PF00194 Eukaryotic-type carbonic anhydrase VIBHAR_05087 PF13006 Insertion element 4 transposase N-terminal VIBHAR_05087 PF01609 Transposase DDE domain VIBHAR_05088 PF00924 Mechanosensitive ion channel VIBHAR_05091 PF02652 L-lactate permease VIBHAR_05092 PF03466 LysR substrate binding domain VIBHAR_05092 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBHAR_05093 PF00326 Prolyl oligopeptidase family VIBHAR_05093 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain VIBHAR_05094 PF00005 ABC transporter VIBHAR_05094 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VIBHAR_05096 PF13654 AAA domain VIBHAR_05096 PF05362 Lon protease (S16) C-terminal proteolytic domain VIBHAR_05097 PF00672 HAMP domain VIBHAR_05097 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBHAR_05099 PF13609 Gram-negative porin VIBHAR_05100 PF07238 PilZ domain VIBHAR_05100 PF12945 Flagellar protein YcgR VIBHAR_05103 PF13302 Acetyltransferase (GNAT) domain VIBHAR_05104 PF01022 Bacterial regulatory protein, arsR family VIBHAR_05108 PF00005 ABC transporter VIBHAR_05108 PF12558 ATP-binding cassette cobalt transporter VIBHAR_05109 PF07155 ECF-type riboflavin transporter, S component VIBHAR_05111 PF00529 HlyD membrane-fusion protein of T1SS VIBHAR_05111 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VIBHAR_05112 PF11742 Protein of unknown function (DUF3302) VIBHAR_05115 PF00990 Diguanylate cyclase, GGDEF domain VIBHAR_05118 PF01048 Phosphorylase superfamily VIBHAR_05120 PF08349 Protein of unknown function (DUF1722) VIBHAR_05121 PF13411 MerR HTH family regulatory protein VIBHAR_05122 PF00875 DNA photolyase VIBHAR_05122 PF03441 FAD binding domain of DNA photolyase VIBHAR_05123 PF03734 L,D-transpeptidase catalytic domain VIBHAR_05123 PF01476 LysM domain VIBHAR_05123 PF17969 L,D-transpeptidase C-terminal domain VIBHAR_05125 PF00270 DEAD/DEAH box helicase VIBHAR_05125 PF00271 Helicase conserved C-terminal domain VIBHAR_05127 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain VIBHAR_05127 PF00326 Prolyl oligopeptidase family VIBHAR_05128 PF07715 TonB-dependent Receptor Plug Domain VIBHAR_05128 PF00593 TonB dependent receptor VIBHAR_05136 PF00672 HAMP domain VIBHAR_05136 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBHAR_05137 PF12849 PBP superfamily domain VIBHAR_05138 PF00528 Binding-protein-dependent transport system inner membrane component VIBHAR_05139 PF00528 Binding-protein-dependent transport system inner membrane component VIBHAR_05140 PF00005 ABC transporter VIBHAR_05143 PF13519 von Willebrand factor type A domain VIBHAR_05144 PF13519 von Willebrand factor type A domain VIBHAR_05146 PF01882 Protein of unknown function DUF58 VIBHAR_05147 PF07726 ATPase family associated with various cellular activities (AAA) VIBHAR_05147 PF17863 AAA lid domain VIBHAR_05149 PF00027 Cyclic nucleotide-binding domain VIBHAR_05149 PF13545 Crp-like helix-turn-helix domain VIBHAR_05150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBHAR_05150 PF00672 HAMP domain VIBHAR_05150 PF02743 Cache domain VIBHAR_05152 PF00196 Bacterial regulatory proteins, luxR family VIBHAR_05153 PF00196 Bacterial regulatory proteins, luxR family VIBHAR_05156 PF00664 ABC transporter transmembrane region VIBHAR_05156 PF00005 ABC transporter VIBHAR_05157 PF00529 HlyD membrane-fusion protein of T1SS VIBHAR_05158 PF00158 Sigma-54 interaction domain VIBHAR_05158 PF02954 Bacterial regulatory protein, Fis family VIBHAR_05158 PF00072 Response regulator receiver domain VIBHAR_05159 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBHAR_05159 PF02743 Cache domain VIBHAR_05159 PF00512 His Kinase A (phospho-acceptor) domain VIBHAR_05164 PF01389 OmpA-like transmembrane domain VIBHAR_05164 PF00691 OmpA family VIBHAR_05166 PF00990 Diguanylate cyclase, GGDEF domain VIBHAR_05166 PF03707 Bacterial signalling protein N terminal repeat VIBHAR_05166 PF00563 EAL domain VIBHAR_05168 PF02378 Phosphotransferase system, EIIC VIBHAR_05169 PF00127 Copper binding proteins, plastocyanin/azurin family VIBHAR_05171 PF07992 Pyridine nucleotide-disulphide oxidoreductase VIBHAR_05172 PF00375 Sodium:dicarboxylate symporter family VIBHAR_05174 PF13419 Haloacid dehalogenase-like hydrolase VIBHAR_05175 PF01609 Transposase DDE domain VIBHAR_05175 PF13006 Insertion element 4 transposase N-terminal VIBHAR_05180 PF00892 EamA-like transporter family VIBHAR_05183 PF01238 Phosphomannose isomerase type I VIBHAR_05184 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VIBHAR_05184 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VIBHAR_05185 PF12833 Helix-turn-helix domain VIBHAR_05187 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VIBHAR_05191 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase VIBHAR_05191 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VIBHAR_05192 PF06628 Catalase-related immune-responsive VIBHAR_05192 PF00199 Catalase VIBHAR_05194 PF16884 N-terminal domain of oxidoreductase VIBHAR_05194 PF00107 Zinc-binding dehydrogenase VIBHAR_05195 PF00440 Bacterial regulatory proteins, tetR family VIBHAR_05195 PF16925 Tetracyclin repressor-like, C-terminal domain VIBHAR_05202 PF00534 Glycosyl transferases group 1 VIBHAR_05202 PF13439 Glycosyltransferase Family 4 VIBHAR_05204 PF13614 AAA domain VIBHAR_05204 PF13807 G-rich domain on putative tyrosine kinase VIBHAR_05204 PF02706 Chain length determinant protein VIBHAR_05207 PF02397 Bacterial sugar transferase VIBHAR_05209 PF03050 Transposase IS66 family VIBHAR_05209 PF13007 Transposase C of IS166 homeodomain VIBHAR_05209 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_05209 PF13817 IS66 C-terminal element VIBHAR_05212 PF13358 DDE superfamily endonuclease VIBHAR_05213 PF00005 ABC transporter VIBHAR_05213 PF08402 TOBE domain VIBHAR_05214 PF01547 Bacterial extracellular solute-binding protein VIBHAR_05215 PF14785 Maltose transport system permease protein MalF P2 domain VIBHAR_05215 PF00528 Binding-protein-dependent transport system inner membrane component VIBHAR_05216 PF00528 Binding-protein-dependent transport system inner membrane component VIBHAR_05226 PF05661 Protein of unknown function (DUF808) VIBHAR_05227 PF01979 Amidohydrolase family VIBHAR_05228 PF01679 Proteolipid membrane potential modulator VIBHAR_05229 PF00970 Oxidoreductase FAD-binding domain VIBHAR_05229 PF00175 Oxidoreductase NAD-binding domain VIBHAR_05229 PF00111 2Fe-2S iron-sulfur cluster binding domain VIBHAR_05230 PF02540 NAD synthase VIBHAR_05231 PF01467 Cytidylyltransferase-like VIBHAR_05239 PF00005 ABC transporter VIBHAR_05240 PF01032 FecCD transport family VIBHAR_05242 PF02472 Biopolymer transport protein ExbD/TolR VIBHAR_05243 PF01618 MotA/TolQ/ExbB proton channel family VIBHAR_05244 PF03544 Gram-negative bacterial TonB protein C-terminal VIBHAR_05245 PF04055 Radical SAM superfamily VIBHAR_05246 PF06228 Haem utilisation ChuX/HutX VIBHAR_05247 PF01243 Pyridoxamine 5'-phosphate oxidase VIBHAR_05250 PF00072 Response regulator receiver domain VIBHAR_05250 PF01584 CheW-like domain VIBHAR_05253 PF00128 Alpha amylase, catalytic domain VIBHAR_05254 PF00550 Phosphopantetheine attachment site VIBHAR_05254 PF02801 Beta-ketoacyl synthase, C-terminal domain VIBHAR_05254 PF00109 Beta-ketoacyl synthase, N-terminal domain VIBHAR_05254 PF16197 Ketoacyl-synthetase C-terminal extension VIBHAR_05254 PF08240 Alcohol dehydrogenase GroES-like domain VIBHAR_05254 PF00698 Acyl transferase domain VIBHAR_05254 PF14765 Polyketide synthase dehydratase VIBHAR_05254 PF08659 KR domain VIBHAR_05256 PF00106 short chain dehydrogenase VIBHAR_05259 PF03466 LysR substrate binding domain VIBHAR_05259 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBHAR_05263 PF03050 Transposase IS66 family VIBHAR_05263 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_05263 PF13007 Transposase C of IS166 homeodomain VIBHAR_05263 PF13817 IS66 C-terminal element VIBHAR_05269 PF03466 LysR substrate binding domain VIBHAR_05269 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBHAR_05271 PF01609 Transposase DDE domain VIBHAR_05271 PF02281 Transposase Tn5 dimerisation domain VIBHAR_05271 PF14706 Transposase DNA-binding VIBHAR_05272 PF01609 Transposase DDE domain VIBHAR_05272 PF02281 Transposase Tn5 dimerisation domain VIBHAR_05272 PF14706 Transposase DNA-binding VIBHAR_05273 PF00999 Sodium/hydrogen exchanger family VIBHAR_05273 PF02254 TrkA-N domain VIBHAR_05274 PF02525 Flavodoxin-like fold VIBHAR_05276 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBHAR_05276 PF03466 LysR substrate binding domain VIBHAR_05287 PF01965 DJ-1/PfpI family VIBHAR_05287 PF12833 Helix-turn-helix domain VIBHAR_05288 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VIBHAR_05289 PF00884 Sulfatase VIBHAR_05289 PF08019 Phosphoethanolamine transferase EptA/EptB VIBHAR_05290 PF01219 Prokaryotic diacylglycerol kinase VIBHAR_05292 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBHAR_05292 PF00512 His Kinase A (phospho-acceptor) domain VIBHAR_05292 PF00672 HAMP domain VIBHAR_05293 PF00072 Response regulator receiver domain VIBHAR_05293 PF00486 Transcriptional regulatory protein, C terminal VIBHAR_05300 PF13358 DDE superfamily endonuclease VIBHAR_05301 PF00583 Acetyltransferase (GNAT) family VIBHAR_05301 PF08218 Citrate lyase ligase C-terminal domain VIBHAR_05303 PF00106 short chain dehydrogenase VIBHAR_05306 PF01323 DSBA-like thioredoxin domain VIBHAR_05309 PF00255 Glutathione peroxidase VIBHAR_05310 PF13006 Insertion element 4 transposase N-terminal VIBHAR_05310 PF01609 Transposase DDE domain VIBHAR_05311 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase VIBHAR_05316 PF01966 HD domain VIBHAR_05319 PF07969 Amidohydrolase family VIBHAR_05320 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin VIBHAR_05323 PF03448 MgtE intracellular N domain VIBHAR_05323 PF00571 CBS domain VIBHAR_05323 PF01769 Divalent cation transporter VIBHAR_05324 PF03109 ABC1 family VIBHAR_05325 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VIBHAR_05325 PF00529 HlyD membrane-fusion protein of T1SS VIBHAR_05331 PF00486 Transcriptional regulatory protein, C terminal VIBHAR_05331 PF00072 Response regulator receiver domain VIBHAR_05332 PF00672 HAMP domain VIBHAR_05332 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBHAR_05332 PF16527 Two-component sensor protein CpxA, periplasmic domain VIBHAR_05332 PF00512 His Kinase A (phospho-acceptor) domain VIBHAR_05334 PF00155 Aminotransferase class I and II VIBHAR_05334 PF00392 Bacterial regulatory proteins, gntR family VIBHAR_05335 PF13520 Amino acid permease VIBHAR_05336 PF13404 AsnC-type helix-turn-helix domain VIBHAR_05336 PF01037 Lrp/AsnC ligand binding domain VIBHAR_05338 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBHAR_05338 PF03466 LysR substrate binding domain VIBHAR_05341 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VIBHAR_05341 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VIBHAR_05344 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VIBHAR_05345 PF01554 MatE VIBHAR_05346 PF04363 Protein of unknown function (DUF496) VIBHAR_05349 PF04337 Protein of unknown function, DUF480 VIBHAR_05350 PF01541 GIY-YIG catalytic domain VIBHAR_05351 PF13407 Periplasmic binding protein domain VIBHAR_05352 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBHAR_05352 PF00512 His Kinase A (phospho-acceptor) domain VIBHAR_05352 PF00072 Response regulator receiver domain VIBHAR_05352 PF09308 LuxQ, periplasmic VIBHAR_05353 PF01609 Transposase DDE domain VIBHAR_05353 PF13006 Insertion element 4 transposase N-terminal VIBHAR_05356 PF01037 Lrp/AsnC ligand binding domain VIBHAR_05361 PF13721 SecD export protein N-terminal TM region VIBHAR_05361 PF07549 SecD/SecF GG Motif VIBHAR_05361 PF02355 Protein export membrane protein VIBHAR_05362 PF02355 Protein export membrane protein VIBHAR_05362 PF07549 SecD/SecF GG Motif VIBHAR_05364 PF01810 LysE type translocator VIBHAR_05365 PF00106 short chain dehydrogenase VIBHAR_05366 PF00108 Thiolase, N-terminal domain VIBHAR_05366 PF02803 Thiolase, C-terminal domain VIBHAR_05368 PF00561 alpha/beta hydrolase fold VIBHAR_05368 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus VIBHAR_05374 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_05374 PF13007 Transposase C of IS166 homeodomain VIBHAR_05374 PF03050 Transposase IS66 family VIBHAR_05374 PF13817 IS66 C-terminal element VIBHAR_05375 PF03264 NapC/NirT cytochrome c family, N-terminal region VIBHAR_05376 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) VIBHAR_05377 PF00384 Molybdopterin oxidoreductase VIBHAR_05377 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VIBHAR_05377 PF01568 Molydopterin dinucleotide binding domain VIBHAR_05379 PF12838 4Fe-4S dicluster domain VIBHAR_05379 PF13187 4Fe-4S dicluster domain VIBHAR_05380 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term VIBHAR_05380 PF00672 HAMP domain VIBHAR_05380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBHAR_05380 PF07730 Histidine kinase VIBHAR_05381 PF00072 Response regulator receiver domain VIBHAR_05381 PF00196 Bacterial regulatory proteins, luxR family VIBHAR_05384 PF07687 Peptidase dimerisation domain VIBHAR_05384 PF01546 Peptidase family M20/M25/M40 VIBHAR_05385 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VIBHAR_05387 PF12729 Four helix bundle sensory module for signal transduction VIBHAR_05387 PF00672 HAMP domain VIBHAR_05387 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBHAR_05388 PF00472 RF-1 domain VIBHAR_05389 PF13419 Haloacid dehalogenase-like hydrolase VIBHAR_05390 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VIBHAR_05390 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase VIBHAR_05392 PF05736 OprF membrane domain VIBHAR_05392 PF00691 OmpA family VIBHAR_05396 PF00313 'Cold-shock' DNA-binding domain VIBHAR_05397 PF03889 Alternative ribosome-rescue factor A VIBHAR_05399 PF00990 Diguanylate cyclase, GGDEF domain VIBHAR_05402 PF00005 ABC transporter VIBHAR_05402 PF12704 MacB-like periplasmic core domain VIBHAR_05402 PF02687 FtsX-like permease family VIBHAR_05403 PF00005 ABC transporter VIBHAR_05403 PF02687 FtsX-like permease family VIBHAR_05403 PF12704 MacB-like periplasmic core domain VIBHAR_05406 PF00672 HAMP domain VIBHAR_05406 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBHAR_05408 PF00210 Ferritin-like domain VIBHAR_05410 PF02016 LD-carboxypeptidase N-terminal domain VIBHAR_05410 PF17676 LD-carboxypeptidase C-terminal domain VIBHAR_05411 PF07995 Glucose / Sorbosone dehydrogenase VIBHAR_05412 PF00465 Iron-containing alcohol dehydrogenase VIBHAR_05416 PF00892 EamA-like transporter family VIBHAR_05418 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBHAR_05418 PF03466 LysR substrate binding domain VIBHAR_05420 PF00501 AMP-binding enzyme VIBHAR_05420 PF13193 AMP-binding enzyme C-terminal domain VIBHAR_05421 PF00351 Biopterin-dependent aromatic amino acid hydroxylase VIBHAR_05422 PF01329 Pterin 4 alpha carbinolamine dehydratase VIBHAR_05428 PF12843 Putative quorum-sensing-regulated virulence factor VIBHAR_05434 PF00583 Acetyltransferase (GNAT) family VIBHAR_05437 PF01470 Pyroglutamyl peptidase VIBHAR_05440 PF02492 CobW/HypB/UreG, nucleotide-binding domain VIBHAR_05440 PF07683 Cobalamin synthesis protein cobW C-terminal domain VIBHAR_05441 PF01609 Transposase DDE domain VIBHAR_05441 PF13006 Insertion element 4 transposase N-terminal VIBHAR_05442 PF05231 MASE1 VIBHAR_05442 PF13426 PAS domain VIBHAR_05442 PF08448 PAS fold VIBHAR_05442 PF00563 EAL domain VIBHAR_05442 PF08447 PAS fold VIBHAR_05442 PF00990 Diguanylate cyclase, GGDEF domain VIBHAR_05443 PF00270 DEAD/DEAH box helicase VIBHAR_05443 PF00271 Helicase conserved C-terminal domain VIBHAR_05448 PF00563 EAL domain VIBHAR_05448 PF12792 CSS motif domain associated with EAL VIBHAR_05449 PF00005 ABC transporter VIBHAR_05450 PF13737 Transposase DDE domain VIBHAR_05451 PF03264 NapC/NirT cytochrome c family, N-terminal region VIBHAR_05452 PF18364 Molybdopterin oxidoreductase N-terminal domain VIBHAR_05452 PF00384 Molybdopterin oxidoreductase VIBHAR_05452 PF01568 Molydopterin dinucleotide binding domain VIBHAR_05454 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_05454 PF13007 Transposase C of IS166 homeodomain VIBHAR_05454 PF13817 IS66 C-terminal element VIBHAR_05454 PF03050 Transposase IS66 family VIBHAR_05460 PF01575 MaoC like domain VIBHAR_05463 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) VIBHAR_05464 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VIBHAR_05464 PF00034 Cytochrome c VIBHAR_05466 PF00115 Cytochrome C and Quinol oxidase polypeptide I VIBHAR_05467 PF00034 Cytochrome c VIBHAR_05477 PF00682 HMGL-like VIBHAR_05478 PF00378 Enoyl-CoA hydratase/isomerase VIBHAR_05479 PF01039 Carboxyl transferase domain VIBHAR_05480 PF02770 Acyl-CoA dehydrogenase, middle domain VIBHAR_05480 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VIBHAR_05480 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VIBHAR_05481 PF00376 MerR family regulatory protein VIBHAR_05481 PF09278 MerR, DNA binding VIBHAR_05482 PF00108 Thiolase, N-terminal domain VIBHAR_05482 PF02803 Thiolase, C-terminal domain VIBHAR_05483 PF00171 Aldehyde dehydrogenase family VIBHAR_05485 PF00378 Enoyl-CoA hydratase/isomerase VIBHAR_05486 PF00378 Enoyl-CoA hydratase/isomerase VIBHAR_05487 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VIBHAR_05487 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase VIBHAR_05491 PF00116 Cytochrome C oxidase subunit II, periplasmic domain VIBHAR_05491 PF06481 COX Aromatic Rich Motif VIBHAR_05492 PF00115 Cytochrome C and Quinol oxidase polypeptide I VIBHAR_05493 PF00510 Cytochrome c oxidase subunit III VIBHAR_05494 PF03626 Prokaryotic Cytochrome C oxidase subunit IV VIBHAR_05495 PF01040 UbiA prenyltransferase family VIBHAR_05496 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VIBHAR_05496 PF07992 Pyridine nucleotide-disulphide oxidoreductase VIBHAR_05499 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBHAR_05499 PF03466 LysR substrate binding domain VIBHAR_05501 PF00171 Aldehyde dehydrogenase family VIBHAR_05503 PF02028 BCCT, betaine/carnitine/choline family transporter VIBHAR_05506 PF02028 BCCT, betaine/carnitine/choline family transporter VIBHAR_05509 PF02281 Transposase Tn5 dimerisation domain VIBHAR_05509 PF14706 Transposase DNA-binding VIBHAR_05509 PF01609 Transposase DDE domain VIBHAR_05510 PF13007 Transposase C of IS166 homeodomain VIBHAR_05510 PF03050 Transposase IS66 family VIBHAR_05510 PF13817 IS66 C-terminal element VIBHAR_05510 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_05511 PF03050 Transposase IS66 family VIBHAR_05511 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_05511 PF13007 Transposase C of IS166 homeodomain VIBHAR_05511 PF13817 IS66 C-terminal element VIBHAR_05515 PF04151 Bacterial pre-peptidase C-terminal domain VIBHAR_05515 PF07504 Fungalysin/Thermolysin Propeptide Motif VIBHAR_05515 PF03413 Peptidase propeptide and YPEB domain VIBHAR_05515 PF02868 Thermolysin metallopeptidase, alpha-helical domain VIBHAR_05515 PF01447 Thermolysin metallopeptidase, catalytic domain VIBHAR_05516 PF04389 Peptidase family M28 VIBHAR_05516 PF04151 Bacterial pre-peptidase C-terminal domain VIBHAR_05522 PF13817 IS66 C-terminal element VIBHAR_05522 PF03050 Transposase IS66 family VIBHAR_05522 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_05522 PF13007 Transposase C of IS166 homeodomain VIBHAR_05523 PF05643 Putative bacterial lipoprotein (DUF799) VIBHAR_05528 PF00005 ABC transporter VIBHAR_05529 PF00497 Bacterial extracellular solute-binding proteins, family 3 VIBHAR_05530 PF00528 Binding-protein-dependent transport system inner membrane component VIBHAR_05531 PF00528 Binding-protein-dependent transport system inner membrane component VIBHAR_05533 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBHAR_05533 PF03466 LysR substrate binding domain VIBHAR_05534 PF13417 Glutathione S-transferase, N-terminal domain VIBHAR_05534 PF00043 Glutathione S-transferase, C-terminal domain VIBHAR_05539 PF00890 FAD binding domain VIBHAR_05539 PF03358 NADPH-dependent FMN reductase VIBHAR_05539 PF04205 FMN-binding domain VIBHAR_05540 PF02424 ApbE family VIBHAR_05544 PF13358 DDE superfamily endonuclease VIBHAR_05545 PF00563 EAL domain VIBHAR_05545 PF12792 CSS motif domain associated with EAL VIBHAR_05548 PF01012 Electron transfer flavoprotein domain VIBHAR_05549 PF00766 Electron transfer flavoprotein FAD-binding domain VIBHAR_05549 PF01012 Electron transfer flavoprotein domain VIBHAR_05550 PF01548 Transposase VIBHAR_05550 PF02371 Transposase IS116/IS110/IS902 family VIBHAR_05553 PF02817 e3 binding domain VIBHAR_05553 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VIBHAR_05553 PF00364 Biotin-requiring enzyme VIBHAR_05554 PF02780 Transketolase, C-terminal domain VIBHAR_05554 PF02779 Transketolase, pyrimidine binding domain VIBHAR_05555 PF00676 Dehydrogenase E1 component VIBHAR_05559 PF00012 Hsp70 protein VIBHAR_05560 PF02371 Transposase IS116/IS110/IS902 family VIBHAR_05560 PF01548 Transposase VIBHAR_05570 PF00486 Transcriptional regulatory protein, C terminal VIBHAR_05570 PF00072 Response regulator receiver domain VIBHAR_05572 PF13006 Insertion element 4 transposase N-terminal VIBHAR_05572 PF01609 Transposase DDE domain VIBHAR_05576 PF01483 Proprotein convertase P-domain VIBHAR_05576 PF00082 Subtilase family VIBHAR_05578 PF00990 Diguanylate cyclase, GGDEF domain VIBHAR_05578 PF08448 PAS fold VIBHAR_05580 PF03222 Tryptophan/tyrosine permease family VIBHAR_05582 PF01568 Molydopterin dinucleotide binding domain VIBHAR_05582 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VIBHAR_05582 PF00384 Molybdopterin oxidoreductase VIBHAR_05583 PF10414 Sirohaem synthase dimerisation region VIBHAR_05583 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VIBHAR_05583 PF14824 Sirohaem biosynthesis protein central VIBHAR_05584 PF02885 Glycosyl transferase family, helical bundle domain VIBHAR_05584 PF00591 Glycosyl transferase family, a/b domain VIBHAR_05585 PF01738 Dienelactone hydrolase family VIBHAR_05586 PF03861 ANTAR domain VIBHAR_05586 PF00072 Response regulator receiver domain VIBHAR_05588 PF00005 ABC transporter VIBHAR_05589 PF00528 Binding-protein-dependent transport system inner membrane component VIBHAR_05590 PF00005 ABC transporter VIBHAR_05591 PF13806 Rieske-like [2Fe-2S] domain VIBHAR_05591 PF04324 BFD-like [2Fe-2S] binding domain VIBHAR_05591 PF01077 Nitrite and sulphite reductase 4Fe-4S domain VIBHAR_05591 PF07992 Pyridine nucleotide-disulphide oxidoreductase VIBHAR_05591 PF18267 Rubredoxin NAD+ reductase C-terminal domain VIBHAR_05591 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain VIBHAR_05594 PF00440 Bacterial regulatory proteins, tetR family VIBHAR_05594 PF08361 MAATS-type transcriptional repressor, C-terminal region VIBHAR_05599 PF00211 Adenylate and Guanylate cyclase catalytic domain VIBHAR_05599 PF00072 Response regulator receiver domain VIBHAR_05602 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBHAR_05602 PF03466 LysR substrate binding domain VIBHAR_05603 PF01476 LysM domain VIBHAR_05603 PF01551 Peptidase family M23 VIBHAR_05603 PF08525 Opacity-associated protein A N-terminal motif VIBHAR_05604 PF13358 DDE superfamily endonuclease VIBHAR_05606 PF13358 DDE superfamily endonuclease VIBHAR_05615 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) VIBHAR_05615 PF11867 Domain of unknown function (DUF3387) VIBHAR_05615 PF18766 SWI2/SNF2 ATPase VIBHAR_05621 PF13276 HTH-like domain VIBHAR_05621 PF00665 Integrase core domain VIBHAR_05621 PF13333 Integrase core domain VIBHAR_05623 PF01551 Peptidase family M23 VIBHAR_05623 PF08525 Opacity-associated protein A N-terminal motif VIBHAR_05623 PF01476 LysM domain VIBHAR_05626 PF13007 Transposase C of IS166 homeodomain VIBHAR_05626 PF03050 Transposase IS66 family VIBHAR_05626 PF13817 IS66 C-terminal element VIBHAR_05626 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_05628 PF13006 Insertion element 4 transposase N-terminal VIBHAR_05628 PF01609 Transposase DDE domain VIBHAR_05630 PF00892 EamA-like transporter family VIBHAR_05634 PF00171 Aldehyde dehydrogenase family VIBHAR_05637 PF01757 Acyltransferase family VIBHAR_05639 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VIBHAR_05640 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VIBHAR_05645 PF13358 DDE superfamily endonuclease VIBHAR_05646 PF17200 Single Cache domain 2 VIBHAR_05646 PF00672 HAMP domain VIBHAR_05646 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBHAR_05650 PF13333 Integrase core domain VIBHAR_05650 PF13276 HTH-like domain VIBHAR_05650 PF00665 Integrase core domain VIBHAR_05652 PF13737 Transposase DDE domain VIBHAR_05653 PF12320 Type 5 capsule protein repressor C-terminal domain VIBHAR_05653 PF00149 Calcineurin-like phosphoesterase VIBHAR_05654 PF13476 AAA domain VIBHAR_05656 PF00704 Glycosyl hydrolases family 18 VIBHAR_05657 PF02281 Transposase Tn5 dimerisation domain VIBHAR_05657 PF01609 Transposase DDE domain VIBHAR_05657 PF14706 Transposase DNA-binding VIBHAR_05658 PF13333 Integrase core domain VIBHAR_05658 PF13276 HTH-like domain VIBHAR_05658 PF00665 Integrase core domain VIBHAR_05660 PF13358 DDE superfamily endonuclease VIBHAR_05664 PF08212 Lipocalin-like domain VIBHAR_05667 PF00034 Cytochrome c VIBHAR_05668 PF01212 Beta-eliminating lyase VIBHAR_05670 PF07728 AAA domain (dynein-related subfamily) VIBHAR_05670 PF17868 AAA lid domain VIBHAR_05670 PF12592 Protein of unknown function (DUF3763) VIBHAR_05671 PF05762 VWA domain containing CoxE-like protein VIBHAR_05675 PF09330 D-lactate dehydrogenase, membrane binding VIBHAR_05675 PF01565 FAD binding domain VIBHAR_05679 PF00128 Alpha amylase, catalytic domain VIBHAR_05679 PF09154 Domain of unknown function (DUF1939) VIBHAR_05687 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VIBHAR_05687 PF10414 Sirohaem synthase dimerisation region VIBHAR_05687 PF14824 Sirohaem biosynthesis protein central VIBHAR_05690 PF03605 Anaerobic c4-dicarboxylate membrane transporter VIBHAR_05691 PF17200 Single Cache domain 2 VIBHAR_05691 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBHAR_05691 PF00672 HAMP domain VIBHAR_05694 PF11756 Nitrous oxide-stimulated promoter VIBHAR_05695 PF13358 DDE superfamily endonuclease VIBHAR_05696 PF07690 Major Facilitator Superfamily VIBHAR_05698 PF00085 Thioredoxin VIBHAR_05699 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal VIBHAR_05699 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III VIBHAR_05700 PF13006 Insertion element 4 transposase N-terminal VIBHAR_05700 PF01609 Transposase DDE domain VIBHAR_05707 PF07992 Pyridine nucleotide-disulphide oxidoreductase VIBHAR_05707 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VIBHAR_05709 PF04143 Sulphur transport VIBHAR_05713 PF13597 Anaerobic ribonucleoside-triphosphate reductase VIBHAR_05713 PF03477 ATP cone domain VIBHAR_05715 PF01554 MatE VIBHAR_05719 PF00155 Aminotransferase class I and II VIBHAR_05721 PF01609 Transposase DDE domain VIBHAR_05721 PF02281 Transposase Tn5 dimerisation domain VIBHAR_05721 PF14706 Transposase DNA-binding VIBHAR_05723 PF04076 Bacterial OB fold (BOF) protein VIBHAR_05724 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain VIBHAR_05724 PF07685 CobB/CobQ-like glutamine amidotransferase domain VIBHAR_05726 PF00528 Binding-protein-dependent transport system inner membrane component VIBHAR_05727 PF00005 ABC transporter VIBHAR_05727 PF03459 TOBE domain VIBHAR_05729 PF01590 GAF domain VIBHAR_05729 PF00563 EAL domain VIBHAR_05729 PF00360 Phytochrome region VIBHAR_05729 PF00990 Diguanylate cyclase, GGDEF domain VIBHAR_05730 PF00990 Diguanylate cyclase, GGDEF domain VIBHAR_05730 PF00072 Response regulator receiver domain VIBHAR_05733 PF01262 Alanine dehydrogenase/PNT, C-terminal domain VIBHAR_05733 PF05222 Alanine dehydrogenase/PNT, N-terminal domain VIBHAR_05733 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch VIBHAR_05734 PF02233 NAD(P) transhydrogenase beta subunit VIBHAR_05736 PF00072 Response regulator receiver domain VIBHAR_05736 PF00486 Transcriptional regulatory protein, C terminal VIBHAR_05739 PF03701 Uncharacterised protein family (UPF0181) VIBHAR_05740 PF01609 Transposase DDE domain VIBHAR_05740 PF13006 Insertion element 4 transposase N-terminal VIBHAR_05742 PF00665 Integrase core domain VIBHAR_05742 PF13276 HTH-like domain VIBHAR_05742 PF13333 Integrase core domain VIBHAR_05750 PF13333 Integrase core domain VIBHAR_05750 PF00665 Integrase core domain VIBHAR_05750 PF13276 HTH-like domain VIBHAR_05757 PF03050 Transposase IS66 family VIBHAR_05757 PF13007 Transposase C of IS166 homeodomain VIBHAR_05757 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_05757 PF13817 IS66 C-terminal element VIBHAR_05783 PF01253 Translation initiation factor SUI1 VIBHAR_05785 PF01820 D-ala D-ala ligase N-terminus VIBHAR_05785 PF07478 D-ala D-ala ligase C-terminus VIBHAR_05786 PF05036 Sporulation related domain VIBHAR_05787 PF13380 CoA binding domain VIBHAR_05787 PF00583 Acetyltransferase (GNAT) family VIBHAR_05787 PF13607 Succinyl-CoA ligase like flavodoxin domain VIBHAR_05788 PF03466 LysR substrate binding domain VIBHAR_05788 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBHAR_05789 PF07715 TonB-dependent Receptor Plug Domain VIBHAR_05789 PF04886 PT repeat VIBHAR_05789 PF00593 TonB dependent receptor VIBHAR_05790 PF01609 Transposase DDE domain VIBHAR_05790 PF13006 Insertion element 4 transposase N-terminal VIBHAR_05793 PF16363 GDP-mannose 4,6 dehydratase VIBHAR_05794 PF08447 PAS fold VIBHAR_05794 PF13426 PAS domain VIBHAR_05794 PF00563 EAL domain VIBHAR_05794 PF08448 PAS fold VIBHAR_05794 PF05231 MASE1 VIBHAR_05794 PF00990 Diguanylate cyclase, GGDEF domain VIBHAR_05795 PF03746 LamB/YcsF family VIBHAR_05796 PF02682 Carboxyltransferase domain, subdomain C and D VIBHAR_05797 PF02626 Carboxyltransferase domain, subdomain A and B VIBHAR_05801 PF13472 GDSL-like Lipase/Acylhydrolase family VIBHAR_05802 PF00005 ABC transporter VIBHAR_05803 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase VIBHAR_05803 PF12241 Trans-2-enoyl-CoA reductase catalytic region VIBHAR_05803 PF07055 Enoyl reductase FAD binding domain VIBHAR_05804 PF13188 PAS domain VIBHAR_05804 PF00990 Diguanylate cyclase, GGDEF domain VIBHAR_05804 PF00563 EAL domain VIBHAR_05804 PF03707 Bacterial signalling protein N terminal repeat VIBHAR_05806 PF00684 DnaJ central domain VIBHAR_05806 PF00226 DnaJ domain VIBHAR_05806 PF01556 DnaJ C terminal domain VIBHAR_05812 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VIBHAR_05812 PF12793 Sugar transport-related sRNA regulator N-term VIBHAR_05814 PF03061 Thioesterase superfamily VIBHAR_05815 PF01435 Peptidase family M48 VIBHAR_05817 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VIBHAR_05818 PF12262 Bacterial virulence factor lipase N-terminal VIBHAR_05821 PF02574 Homocysteine S-methyltransferase VIBHAR_05821 PF02965 Vitamin B12 dependent methionine synthase, activation domain VIBHAR_05821 PF02607 B12 binding domain VIBHAR_05821 PF00809 Pterin binding enzyme VIBHAR_05821 PF02310 B12 binding domain VIBHAR_05822 PF03050 Transposase IS66 family VIBHAR_05822 PF13817 IS66 C-terminal element VIBHAR_05822 PF13007 Transposase C of IS166 homeodomain VIBHAR_05822 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_05832 PF02369 Bacterial Ig-like domain (group 1) VIBHAR_05832 PF09134 Invasin, domain 3 VIBHAR_05832 PF11924 Inverse autotransporter, beta-domain VIBHAR_05843 PF03466 LysR substrate binding domain VIBHAR_05843 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBHAR_05845 PF00563 EAL domain VIBHAR_05845 PF03707 Bacterial signalling protein N terminal repeat VIBHAR_05845 PF00990 Diguanylate cyclase, GGDEF domain VIBHAR_05847 PF07715 TonB-dependent Receptor Plug Domain VIBHAR_05847 PF00593 TonB dependent receptor VIBHAR_05850 PF13737 Transposase DDE domain VIBHAR_05858 PF01037 Lrp/AsnC ligand binding domain VIBHAR_05865 PF00069 Protein kinase domain VIBHAR_05870 PF04717 Type VI secretion system, phage-baseplate injector VIBHAR_05871 PF05638 Type VI secretion system effector, Hcp VIBHAR_05872 PF17871 AAA lid domain VIBHAR_05872 PF07724 AAA domain (Cdc48 subfamily) VIBHAR_05872 PF00004 ATPase family associated with various cellular activities (AAA) VIBHAR_05872 PF10431 C-terminal, D2-small domain, of ClpB protein VIBHAR_05873 PF00158 Sigma-54 interaction domain VIBHAR_05873 PF02954 Bacterial regulatory protein, Fis family VIBHAR_05874 PF00691 OmpA family VIBHAR_05878 PF13006 Insertion element 4 transposase N-terminal VIBHAR_05878 PF01609 Transposase DDE domain VIBHAR_05879 PF00893 Small Multidrug Resistance protein VIBHAR_05880 PF00893 Small Multidrug Resistance protein VIBHAR_05882 PF01569 PAP2 superfamily VIBHAR_05888 PF00892 EamA-like transporter family VIBHAR_05890 PF00072 Response regulator receiver domain VIBHAR_05890 PF01584 CheW-like domain VIBHAR_05892 PF00881 Nitroreductase family VIBHAR_05893 PF13358 DDE superfamily endonuclease VIBHAR_05894 PF00072 Response regulator receiver domain VIBHAR_05894 PF00196 Bacterial regulatory proteins, luxR family VIBHAR_05897 PF13358 DDE superfamily endonuclease VIBHAR_05899 PF00704 Glycosyl hydrolases family 18 VIBHAR_05900 PF13737 Transposase DDE domain VIBHAR_05901 PF13737 Transposase DDE domain VIBHAR_05905 PF13737 Transposase DDE domain VIBHAR_05906 PF13007 Transposase C of IS166 homeodomain VIBHAR_05906 PF03050 Transposase IS66 family VIBHAR_05906 PF13817 IS66 C-terminal element VIBHAR_05906 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_05910 PF13006 Insertion element 4 transposase N-terminal VIBHAR_05910 PF01609 Transposase DDE domain VIBHAR_05912 PF03741 Integral membrane protein TerC family VIBHAR_05914 PF00149 Calcineurin-like phosphoesterase VIBHAR_05914 PF02872 5'-nucleotidase, C-terminal domain VIBHAR_05915 PF11398 Protein of unknown function (DUF2813) VIBHAR_05916 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) VIBHAR_05920 PF06496 Protein of unknown function (DUF1097) VIBHAR_05922 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBHAR_05922 PF03466 LysR substrate binding domain VIBHAR_05923 PF01226 Formate/nitrite transporter VIBHAR_05924 PF04264 YceI-like domain VIBHAR_05925 PF01292 Prokaryotic cytochrome b561 VIBHAR_05929 PF13007 Transposase C of IS166 homeodomain VIBHAR_05929 PF03050 Transposase IS66 family VIBHAR_05929 PF13817 IS66 C-terminal element VIBHAR_05929 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_05932 PF00563 EAL domain VIBHAR_05932 PF12792 CSS motif domain associated with EAL VIBHAR_05933 PF00271 Helicase conserved C-terminal domain VIBHAR_05933 PF00270 DEAD/DEAH box helicase VIBHAR_05934 PF04336 Acyl carrier protein phosphodiesterase VIBHAR_05936 PF00672 HAMP domain VIBHAR_05936 PF17200 Single Cache domain 2 VIBHAR_05936 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBHAR_05938 PF13419 Haloacid dehalogenase-like hydrolase VIBHAR_05942 PF00294 pfkB family carbohydrate kinase VIBHAR_05943 PF01268 Formate--tetrahydrofolate ligase VIBHAR_05944 PF00483 Nucleotidyl transferase VIBHAR_05945 PF06483 Chitinase C VIBHAR_05945 PF00704 Glycosyl hydrolases family 18 VIBHAR_05946 PF12833 Helix-turn-helix domain VIBHAR_05946 PF06719 AraC-type transcriptional regulator N-terminus VIBHAR_05947 PF00465 Iron-containing alcohol dehydrogenase VIBHAR_05950 PF00005 ABC transporter VIBHAR_05951 PF00528 Binding-protein-dependent transport system inner membrane component VIBHAR_05952 PF00497 Bacterial extracellular solute-binding proteins, family 3 VIBHAR_05953 PF00528 Binding-protein-dependent transport system inner membrane component VIBHAR_05954 PF00989 PAS fold VIBHAR_05954 PF00990 Diguanylate cyclase, GGDEF domain VIBHAR_05954 PF01590 GAF domain VIBHAR_05954 PF00563 EAL domain VIBHAR_05957 PF00356 Bacterial regulatory proteins, lacI family VIBHAR_05957 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VIBHAR_05958 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VIBHAR_05958 PF00381 PTS HPr component phosphorylation site VIBHAR_05959 PF00294 pfkB family carbohydrate kinase VIBHAR_05960 PF02378 Phosphotransferase system, EIIC VIBHAR_05960 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VIBHAR_05963 PF00873 AcrB/AcrD/AcrF family VIBHAR_05964 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VIBHAR_05965 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VIBHAR_05967 PF13006 Insertion element 4 transposase N-terminal VIBHAR_05967 PF01609 Transposase DDE domain VIBHAR_05968 PF08669 Glycine cleavage T-protein C-terminal barrel domain VIBHAR_05968 PF01571 Aminomethyltransferase folate-binding domain VIBHAR_05971 PF00464 Serine hydroxymethyltransferase VIBHAR_05972 PF01597 Glycine cleavage H-protein VIBHAR_05973 PF02347 Glycine cleavage system P-protein VIBHAR_05975 PF13737 Transposase DDE domain VIBHAR_05976 PF02369 Bacterial Ig-like domain (group 1) VIBHAR_05976 PF09134 Invasin, domain 3 VIBHAR_05976 PF11924 Inverse autotransporter, beta-domain VIBHAR_05981 PF13737 Transposase DDE domain VIBHAR_05983 PF13737 Transposase DDE domain VIBHAR_05985 PF13737 Transposase DDE domain VIBHAR_05988 PF12759 InsA C-terminal domain VIBHAR_05988 PF03811 InsA N-terminal domain VIBHAR_05989 PF13737 Transposase DDE domain VIBHAR_05990 PF11924 Inverse autotransporter, beta-domain VIBHAR_05990 PF02369 Bacterial Ig-like domain (group 1) VIBHAR_05990 PF09134 Invasin, domain 3 VIBHAR_05997 PF13737 Transposase DDE domain VIBHAR_06000 PF13358 DDE superfamily endonuclease VIBHAR_06001 PF03811 InsA N-terminal domain VIBHAR_06001 PF12759 InsA C-terminal domain VIBHAR_06002 PF13737 Transposase DDE domain VIBHAR_06007 PF01497 Periplasmic binding protein VIBHAR_06008 PF01032 FecCD transport family VIBHAR_06009 PF01032 FecCD transport family VIBHAR_06010 PF00005 ABC transporter VIBHAR_06014 PF00665 Integrase core domain VIBHAR_06014 PF13276 HTH-like domain VIBHAR_06014 PF13333 Integrase core domain VIBHAR_06018 PF01039 Carboxyl transferase domain VIBHAR_06018 PF17848 Acetyl-coA carboxylase zinc finger domain VIBHAR_06019 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBHAR_06019 PF03466 LysR substrate binding domain VIBHAR_06023 PF00005 ABC transporter VIBHAR_06023 PF00664 ABC transporter transmembrane region VIBHAR_06025 PF02583 Metal-sensitive transcriptional repressor VIBHAR_06029 PF00293 NUDIX domain VIBHAR_06034 PF07690 Major Facilitator Superfamily VIBHAR_06044 PF13358 DDE superfamily endonuclease VIBHAR_06055 PF13817 IS66 C-terminal element VIBHAR_06055 PF03050 Transposase IS66 family VIBHAR_06055 PF13007 Transposase C of IS166 homeodomain VIBHAR_06055 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_06056 PF01695 IstB-like ATP binding protein VIBHAR_06058 PF00665 Integrase core domain VIBHAR_06063 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VIBHAR_06063 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain VIBHAR_06063 PF02142 MGS-like domain VIBHAR_06067 PF00692 dUTPase VIBHAR_06080 PF00665 Integrase core domain VIBHAR_06080 PF13333 Integrase core domain VIBHAR_06080 PF13276 HTH-like domain VIBHAR_06087 PF01926 50S ribosome-binding GTPase VIBHAR_06088 PF00155 Aminotransferase class I and II VIBHAR_06089 PF00072 Response regulator receiver domain VIBHAR_06089 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBHAR_06090 PF13358 DDE superfamily endonuclease VIBHAR_06095 PF03606 C4-dicarboxylate anaerobic carrier VIBHAR_06099 PF08774 VRR-NUC domain VIBHAR_06099 PF18081 Fanconi anemia-associated nuclease SAP domain VIBHAR_06102 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VIBHAR_06102 PF01872 RibD C-terminal domain VIBHAR_06103 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain VIBHAR_06103 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain VIBHAR_06104 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VIBHAR_06104 PF02874 ATP synthase alpha/beta family, beta-barrel domain VIBHAR_06105 PF00231 ATP synthase VIBHAR_06106 PF02874 ATP synthase alpha/beta family, beta-barrel domain VIBHAR_06106 PF00306 ATP synthase alpha/beta chain, C terminal domain VIBHAR_06106 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VIBHAR_06107 PF00213 ATP synthase delta (OSCP) subunit VIBHAR_06108 PF00430 ATP synthase B/B' CF(0) VIBHAR_06109 PF00137 ATP synthase subunit C VIBHAR_06110 PF00119 ATP synthase A chain VIBHAR_06112 PF00486 Transcriptional regulatory protein, C terminal VIBHAR_06112 PF00072 Response regulator receiver domain VIBHAR_06113 PF16750 Sensor domain of 2-component histidine kinase VIBHAR_06113 PF00512 His Kinase A (phospho-acceptor) domain VIBHAR_06113 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBHAR_06113 PF00672 HAMP domain VIBHAR_06119 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBHAR_06119 PF00512 His Kinase A (phospho-acceptor) domain VIBHAR_06119 PF00672 HAMP domain VIBHAR_06119 PF01627 Hpt domain VIBHAR_06119 PF00072 Response regulator receiver domain VIBHAR_06120 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VIBHAR_06121 PF02142 MGS-like domain VIBHAR_06122 PF12462 DNA helicase IV / RNA helicase N terminal VIBHAR_06122 PF13361 UvrD-like helicase C-terminal domain VIBHAR_06122 PF00580 UvrD/REP helicase N-terminal domain VIBHAR_06123 PF12805 FUSC-like inner membrane protein yccS VIBHAR_06131 PF13411 MerR HTH family regulatory protein VIBHAR_06132 PF00005 ABC transporter VIBHAR_06133 PF01032 FecCD transport family VIBHAR_06134 PF01032 FecCD transport family VIBHAR_06135 PF01497 Periplasmic binding protein VIBHAR_06138 PF01048 Phosphorylase superfamily VIBHAR_06139 PF04973 Nicotinamide mononucleotide transporter VIBHAR_06141 PF00356 Bacterial regulatory proteins, lacI family VIBHAR_06142 PF00294 pfkB family carbohydrate kinase VIBHAR_06143 PF13407 Periplasmic binding protein domain VIBHAR_06144 PF02653 Branched-chain amino acid transport system / permease component VIBHAR_06145 PF00005 ABC transporter VIBHAR_06146 PF05025 RbsD / FucU transport protein family VIBHAR_06147 PF00990 Diguanylate cyclase, GGDEF domain VIBHAR_06147 PF00563 EAL domain VIBHAR_06152 PF01609 Transposase DDE domain VIBHAR_06152 PF14706 Transposase DNA-binding VIBHAR_06152 PF02281 Transposase Tn5 dimerisation domain VIBHAR_06156 PF09335 SNARE associated Golgi protein VIBHAR_06161 PF04116 Fatty acid hydroxylase superfamily VIBHAR_06166 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) VIBHAR_06167 PF00072 Response regulator receiver domain VIBHAR_06167 PF00512 His Kinase A (phospho-acceptor) domain VIBHAR_06167 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBHAR_06167 PF09308 LuxQ, periplasmic VIBHAR_06168 PF03150 Di-haem cytochrome c peroxidase VIBHAR_06168 PF00034 Cytochrome c VIBHAR_06169 PF09456 RcsC Alpha-Beta-Loop (ABL) VIBHAR_06169 PF00072 Response regulator receiver domain VIBHAR_06169 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBHAR_06169 PF00512 His Kinase A (phospho-acceptor) domain VIBHAR_06170 PF00563 EAL domain VIBHAR_06170 PF03707 Bacterial signalling protein N terminal repeat VIBHAR_06170 PF00990 Diguanylate cyclase, GGDEF domain VIBHAR_06174 PF01145 SPFH domain / Band 7 family VIBHAR_06174 PF16200 C-terminal region of band_7 VIBHAR_06175 PF00881 Nitroreductase family VIBHAR_06176 PF00005 ABC transporter VIBHAR_06176 PF00571 CBS domain VIBHAR_06177 PF00528 Binding-protein-dependent transport system inner membrane component VIBHAR_06178 PF04069 Substrate binding domain of ABC-type glycine betaine transport system VIBHAR_06179 PF00732 GMC oxidoreductase VIBHAR_06179 PF05199 GMC oxidoreductase VIBHAR_06180 PF00171 Aldehyde dehydrogenase family VIBHAR_06181 PF00440 Bacterial regulatory proteins, tetR family VIBHAR_06181 PF13977 BetI-type transcriptional repressor, C-terminal VIBHAR_06183 PF13333 Integrase core domain VIBHAR_06183 PF00665 Integrase core domain VIBHAR_06183 PF13276 HTH-like domain VIBHAR_06186 PF13488 Glycine zipper VIBHAR_06186 PF00691 OmpA family VIBHAR_06193 PF00437 Type II/IV secretion system protein VIBHAR_06194 PF10609 NUBPL iron-transfer P-loop NTPase VIBHAR_06196 PF04972 BON domain VIBHAR_06196 PF13629 Pilus formation protein N terminal region VIBHAR_06196 PF00263 Bacterial type II and III secretion system protein VIBHAR_06200 PF03466 LysR substrate binding domain VIBHAR_06200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBHAR_06213 PF09615 CRISPR-associated protein (Cas_Csy3) VIBHAR_06215 PF01381 Helix-turn-helix VIBHAR_06217 PF04851 Type III restriction enzyme, res subunit VIBHAR_06222 PF00665 Integrase core domain VIBHAR_06222 PF09299 Mu transposase, C-terminal VIBHAR_06224 PF00478 IMP dehydrogenase / GMP reductase domain VIBHAR_06226 PF03853 YjeF-related protein N-terminus VIBHAR_06226 PF01256 Carbohydrate kinase VIBHAR_06228 PF00072 Response regulator receiver domain VIBHAR_06230 PF00248 Aldo/keto reductase family VIBHAR_06233 PF00654 Voltage gated chloride channel VIBHAR_06235 PF01227 GTP cyclohydrolase I VIBHAR_06236 PF03453 MoeA N-terminal region (domain I and II) VIBHAR_06236 PF03454 MoeA C-terminal region (domain IV) VIBHAR_06236 PF00994 Probable molybdopterin binding domain VIBHAR_06237 PF00899 ThiF family VIBHAR_06238 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase VIBHAR_06239 PF00175 Oxidoreductase NAD-binding domain VIBHAR_06240 PF04443 Acyl-protein synthetase, LuxE VIBHAR_06241 PF00296 Luciferase-like monooxygenase VIBHAR_06242 PF00296 Luciferase-like monooxygenase VIBHAR_06243 PF02273 Acyl transferase VIBHAR_06244 PF05893 Acyl-CoA reductase (LuxC) VIBHAR_06246 PF01527 Transposase VIBHAR_06247 PF13276 HTH-like domain VIBHAR_06247 PF13333 Integrase core domain VIBHAR_06247 PF00665 Integrase core domain VIBHAR_06252 PF00581 Rhodanese-like domain VIBHAR_06253 PF00563 EAL domain VIBHAR_06253 PF03707 Bacterial signalling protein N terminal repeat VIBHAR_06253 PF00990 Diguanylate cyclase, GGDEF domain VIBHAR_06254 PF00704 Glycosyl hydrolases family 18 VIBHAR_06254 PF08329 Chitinase A, N-terminal domain VIBHAR_06256 PF00923 Transaldolase/Fructose-6-phosphate aldolase VIBHAR_06257 PF02779 Transketolase, pyrimidine binding domain VIBHAR_06257 PF02780 Transketolase, C-terminal domain VIBHAR_06257 PF00456 Transketolase, thiamine diphosphate binding domain VIBHAR_06258 PF12729 Four helix bundle sensory module for signal transduction VIBHAR_06258 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBHAR_06258 PF00672 HAMP domain VIBHAR_06259 PF07690 Major Facilitator Superfamily VIBHAR_06260 PF14706 Transposase DNA-binding VIBHAR_06260 PF02281 Transposase Tn5 dimerisation domain VIBHAR_06260 PF01609 Transposase DDE domain VIBHAR_06261 PF00793 DAHP synthetase I family VIBHAR_06262 PF01389 OmpA-like transmembrane domain VIBHAR_06262 PF00691 OmpA family VIBHAR_06264 PF01040 UbiA prenyltransferase family VIBHAR_06265 PF02628 Cytochrome oxidase assembly protein VIBHAR_06269 PF00510 Cytochrome c oxidase subunit III VIBHAR_06270 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 VIBHAR_06271 PF00115 Cytochrome C and Quinol oxidase polypeptide I VIBHAR_06272 PF02790 Cytochrome C oxidase subunit II, transmembrane domain VIBHAR_06272 PF00116 Cytochrome C oxidase subunit II, periplasmic domain VIBHAR_06273 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VIBHAR_06273 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VIBHAR_06273 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VIBHAR_06273 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VIBHAR_06275 PF01609 Transposase DDE domain VIBHAR_06275 PF13006 Insertion element 4 transposase N-terminal VIBHAR_06278 PF01810 LysE type translocator VIBHAR_06282 PF01557 Fumarylacetoacetate (FAA) hydrolase family VIBHAR_06289 PF14706 Transposase DNA-binding VIBHAR_06289 PF01609 Transposase DDE domain VIBHAR_06289 PF02281 Transposase Tn5 dimerisation domain VIBHAR_06291 PF00892 EamA-like transporter family VIBHAR_06292 PF00462 Glutaredoxin VIBHAR_06295 PF07690 Major Facilitator Superfamily VIBHAR_06296 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBHAR_06296 PF03466 LysR substrate binding domain VIBHAR_06297 PF01032 FecCD transport family VIBHAR_06299 PF00593 TonB dependent receptor VIBHAR_06299 PF07715 TonB-dependent Receptor Plug Domain VIBHAR_06300 PF12833 Helix-turn-helix domain VIBHAR_06304 PF00005 ABC transporter VIBHAR_06306 PF01476 LysM domain VIBHAR_06306 PF01551 Peptidase family M23 VIBHAR_06306 PF08525 Opacity-associated protein A N-terminal motif VIBHAR_06313 PF13358 DDE superfamily endonuclease VIBHAR_06314 PF02743 Cache domain VIBHAR_06314 PF00672 HAMP domain VIBHAR_06314 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBHAR_06317 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) VIBHAR_06320 PF03222 Tryptophan/tyrosine permease family VIBHAR_06333 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) VIBHAR_06336 PF01638 HxlR-like helix-turn-helix VIBHAR_06339 PF01758 Sodium Bile acid symporter family VIBHAR_06342 PF01161 Phosphatidylethanolamine-binding protein VIBHAR_06343 PF01042 Endoribonuclease L-PSP VIBHAR_06344 PF10282 Lactonase, 7-bladed beta-propeller VIBHAR_06345 PF02838 Glycosyl hydrolase family 20, domain 2 VIBHAR_06345 PF00728 Glycosyl hydrolase family 20, catalytic domain VIBHAR_06346 PF01081 KDPG and KHG aldolase VIBHAR_06348 PF01081 KDPG and KHG aldolase VIBHAR_06349 PF00294 pfkB family carbohydrate kinase VIBHAR_06350 PF00474 Sodium:solute symporter family VIBHAR_06351 PF13358 DDE superfamily endonuclease VIBHAR_06353 PF07969 Amidohydrolase family VIBHAR_06356 PF02685 Glucokinase VIBHAR_06356 PF01380 SIS domain VIBHAR_06356 PF01418 Helix-turn-helix domain, rpiR family VIBHAR_06358 PF00005 ABC transporter VIBHAR_06362 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VIBHAR_06362 PF00384 Molybdopterin oxidoreductase VIBHAR_06362 PF12838 4Fe-4S dicluster domain VIBHAR_06362 PF01568 Molydopterin dinucleotide binding domain VIBHAR_06362 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region VIBHAR_06366 PF00873 AcrB/AcrD/AcrF family VIBHAR_06368 PF01810 LysE type translocator VIBHAR_06369 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBHAR_06369 PF03466 LysR substrate binding domain VIBHAR_06372 PF00293 NUDIX domain VIBHAR_06375 PF00034 Cytochrome c VIBHAR_06375 PF14376 Haem-binding domain VIBHAR_06375 PF03150 Di-haem cytochrome c peroxidase VIBHAR_06376 PF13358 DDE superfamily endonuclease VIBHAR_06378 PF13302 Acetyltransferase (GNAT) domain VIBHAR_06379 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) VIBHAR_06380 PF13737 Transposase DDE domain VIBHAR_06386 PF00326 Prolyl oligopeptidase family VIBHAR_06386 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain VIBHAR_06387 PF00005 ABC transporter VIBHAR_06387 PF16326 ABC transporter C-terminal domain VIBHAR_06387 PF12848 ABC transporter VIBHAR_06388 PF13358 DDE superfamily endonuclease VIBHAR_06389 PF16326 ABC transporter C-terminal domain VIBHAR_06389 PF12848 ABC transporter VIBHAR_06389 PF00005 ABC transporter VIBHAR_06392 PF00582 Universal stress protein family VIBHAR_06393 PF01609 Transposase DDE domain VIBHAR_06393 PF13006 Insertion element 4 transposase N-terminal VIBHAR_06394 PF00455 DeoR C terminal sensor domain VIBHAR_06394 PF08220 DeoR-like helix-turn-helix domain VIBHAR_06395 PF03009 Glycerophosphoryl diester phosphodiesterase family VIBHAR_06396 PF13416 Bacterial extracellular solute-binding protein VIBHAR_06397 PF00528 Binding-protein-dependent transport system inner membrane component VIBHAR_06398 PF00528 Binding-protein-dependent transport system inner membrane component VIBHAR_06399 PF17912 MalK OB fold domain VIBHAR_06399 PF00005 ABC transporter VIBHAR_06402 PF13007 Transposase C of IS166 homeodomain VIBHAR_06402 PF13817 IS66 C-terminal element VIBHAR_06402 PF03050 Transposase IS66 family VIBHAR_06402 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_06409 PF01047 MarR family VIBHAR_06411 PF02492 CobW/HypB/UreG, nucleotide-binding domain VIBHAR_06411 PF07683 Cobalamin synthesis protein cobW C-terminal domain VIBHAR_06412 PF00132 Bacterial transferase hexapeptide (six repeats) VIBHAR_06413 PF01979 Amidohydrolase family VIBHAR_06415 PF01734 Patatin-like phospholipase VIBHAR_06417 PF05726 Pirin C-terminal cupin domain VIBHAR_06417 PF02678 Pirin VIBHAR_06418 PF00313 'Cold-shock' DNA-binding domain VIBHAR_06421 PF00962 Adenosine/AMP deaminase VIBHAR_06423 PF08534 Redoxin VIBHAR_06423 PF00462 Glutaredoxin VIBHAR_06424 PF08241 Methyltransferase domain VIBHAR_06426 PF00768 D-alanyl-D-alanine carboxypeptidase VIBHAR_06426 PF07943 Penicillin-binding protein 5, C-terminal domain VIBHAR_06429 PF02028 BCCT, betaine/carnitine/choline family transporter VIBHAR_06431 PF02798 Glutathione S-transferase, N-terminal domain VIBHAR_06436 PF13419 Haloacid dehalogenase-like hydrolase VIBHAR_06441 PF13817 IS66 C-terminal element VIBHAR_06441 PF03050 Transposase IS66 family VIBHAR_06441 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_06441 PF13007 Transposase C of IS166 homeodomain VIBHAR_06446 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) VIBHAR_06446 PF06594 Haemolysin-type calcium binding protein related domain VIBHAR_06446 PF06594 Haemolysin-type calcium binding protein related domain VIBHAR_06446 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) VIBHAR_06448 PF06594 Haemolysin-type calcium binding protein related domain VIBHAR_06448 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) VIBHAR_06452 PF00005 ABC transporter VIBHAR_06452 PF00664 ABC transporter transmembrane region VIBHAR_06452 PF03412 Peptidase C39 family VIBHAR_06455 PF00664 ABC transporter transmembrane region VIBHAR_06455 PF03412 Peptidase C39 family VIBHAR_06455 PF00005 ABC transporter VIBHAR_06458 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) VIBHAR_06472 PF00155 Aminotransferase class I and II VIBHAR_06483 PF00270 DEAD/DEAH box helicase VIBHAR_06483 PF00271 Helicase conserved C-terminal domain VIBHAR_06484 PF13007 Transposase C of IS166 homeodomain VIBHAR_06484 PF03050 Transposase IS66 family VIBHAR_06484 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_06484 PF13817 IS66 C-terminal element VIBHAR_06494 PF03466 LysR substrate binding domain VIBHAR_06494 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBHAR_06496 PF07690 Major Facilitator Superfamily VIBHAR_06498 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VIBHAR_06500 PF05816 Toxic anion resistance protein (TelA) VIBHAR_06502 PF05496 Holliday junction DNA helicase RuvB P-loop domain VIBHAR_06502 PF05491 RuvB C-terminal winged helix domain VIBHAR_06502 PF17864 RuvB AAA lid domain VIBHAR_06507 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) VIBHAR_06508 PF04228 Putative neutral zinc metallopeptidase VIBHAR_06511 PF03466 LysR substrate binding domain VIBHAR_06511 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBHAR_06514 PF03707 Bacterial signalling protein N terminal repeat VIBHAR_06514 PF00990 Diguanylate cyclase, GGDEF domain VIBHAR_06514 PF00563 EAL domain VIBHAR_06515 PF00710 Asparaginase, N-terminal VIBHAR_06515 PF17763 Glutaminase/Asparaginase C-terminal domain VIBHAR_06516 PF03618 Kinase/pyrophosphorylase VIBHAR_06517 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain VIBHAR_06517 PF02896 PEP-utilising enzyme, TIM barrel domain VIBHAR_06517 PF00391 PEP-utilising enzyme, mobile domain VIBHAR_06519 PF00196 Bacterial regulatory proteins, luxR family VIBHAR_06519 PF00072 Response regulator receiver domain VIBHAR_06520 PF00579 tRNA synthetases class I (W and Y) VIBHAR_06524 PF13358 DDE superfamily endonuclease VIBHAR_06528 PF02600 Disulfide bond formation protein DsbB VIBHAR_06531 PF00563 EAL domain VIBHAR_06531 PF03707 Bacterial signalling protein N terminal repeat VIBHAR_06531 PF00990 Diguanylate cyclase, GGDEF domain VIBHAR_06533 PF00196 Bacterial regulatory proteins, luxR family VIBHAR_06534 PF01609 Transposase DDE domain VIBHAR_06534 PF13006 Insertion element 4 transposase N-terminal VIBHAR_06535 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 VIBHAR_06535 PF02837 Glycosyl hydrolases family 2, sugar binding domain VIBHAR_06535 PF02836 Glycosyl hydrolases family 2, TIM barrel domain VIBHAR_06535 PF00703 Glycosyl hydrolases family 2 VIBHAR_06536 PF02028 BCCT, betaine/carnitine/choline family transporter VIBHAR_06541 PF00873 AcrB/AcrD/AcrF family VIBHAR_06545 PF00873 AcrB/AcrD/AcrF family VIBHAR_06546 PF13533 Biotin-lipoyl like VIBHAR_06555 PF09278 MerR, DNA binding VIBHAR_06555 PF00376 MerR family regulatory protein VIBHAR_06558 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain VIBHAR_06558 PF13378 Enolase C-terminal domain-like VIBHAR_06561 PF13276 HTH-like domain VIBHAR_06561 PF00665 Integrase core domain VIBHAR_06561 PF13333 Integrase core domain VIBHAR_06563 PF00528 Binding-protein-dependent transport system inner membrane component VIBHAR_06564 PF00571 CBS domain VIBHAR_06564 PF00005 ABC transporter VIBHAR_06565 PF01610 Transposase VIBHAR_06565 PF13542 Helix-turn-helix domain of transposase family ISL3 VIBHAR_06565 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 VIBHAR_06568 PF03466 LysR substrate binding domain VIBHAR_06568 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBHAR_06570 PF00497 Bacterial extracellular solute-binding proteins, family 3 VIBHAR_06570 PF01464 Transglycosylase SLT domain VIBHAR_06572 PF06942 GlpM protein VIBHAR_06575 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain VIBHAR_06575 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family VIBHAR_06577 PF00857 Isochorismatase family VIBHAR_06578 PF00080 Copper/zinc superoxide dismutase (SODC) VIBHAR_06580 PF06628 Catalase-related immune-responsive VIBHAR_06580 PF00199 Catalase VIBHAR_06583 PF00455 DeoR C terminal sensor domain VIBHAR_06583 PF08220 DeoR-like helix-turn-helix domain VIBHAR_06584 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VIBHAR_06586 PF01625 Peptide methionine sulfoxide reductase VIBHAR_06586 PF01641 SelR domain VIBHAR_06588 PF13358 DDE superfamily endonuclease VIBHAR_06596 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) VIBHAR_06597 PF17678 Glycosyl hydrolase family 92 N-terminal domain VIBHAR_06597 PF07971 Glycosyl hydrolase family 92 VIBHAR_06598 PF17678 Glycosyl hydrolase family 92 N-terminal domain VIBHAR_06598 PF07971 Glycosyl hydrolase family 92 VIBHAR_06601 PF17678 Glycosyl hydrolase family 92 N-terminal domain VIBHAR_06601 PF07971 Glycosyl hydrolase family 92 VIBHAR_06602 PF17678 Glycosyl hydrolase family 92 N-terminal domain VIBHAR_06602 PF07971 Glycosyl hydrolase family 92 VIBHAR_06604 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBHAR_06604 PF03466 LysR substrate binding domain VIBHAR_06605 PF01810 LysE type translocator VIBHAR_06606 PF00581 Rhodanese-like domain VIBHAR_06609 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) VIBHAR_06613 PF09905 DNA-binding protein VF530 VIBHAR_06614 PF12848 ABC transporter VIBHAR_06614 PF00005 ABC transporter VIBHAR_06617 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VIBHAR_06618 PF02567 Phenazine biosynthesis-like protein VIBHAR_06625 PF00512 His Kinase A (phospho-acceptor) domain VIBHAR_06625 PF00672 HAMP domain VIBHAR_06625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBHAR_06627 PF00486 Transcriptional regulatory protein, C terminal VIBHAR_06627 PF00072 Response regulator receiver domain VIBHAR_06629 PF00583 Acetyltransferase (GNAT) family VIBHAR_06630 PF00113 Enolase, C-terminal TIM barrel domain VIBHAR_06630 PF03952 Enolase, N-terminal domain VIBHAR_06632 PF07690 Major Facilitator Superfamily VIBHAR_06633 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBHAR_06633 PF03466 LysR substrate binding domain VIBHAR_06634 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family VIBHAR_06636 PF00892 EamA-like transporter family VIBHAR_06643 PF01594 AI-2E family transporter VIBHAR_06645 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) VIBHAR_06648 PF00175 Oxidoreductase NAD-binding domain VIBHAR_06648 PF00970 Oxidoreductase FAD-binding domain VIBHAR_06650 PF09905 DNA-binding protein VF530 VIBHAR_06651 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBHAR_06651 PF03466 LysR substrate binding domain VIBHAR_06653 PF00768 D-alanyl-D-alanine carboxypeptidase VIBHAR_06653 PF07943 Penicillin-binding protein 5, C-terminal domain VIBHAR_06659 PF03441 FAD binding domain of DNA photolyase VIBHAR_06659 PF00875 DNA photolyase VIBHAR_06660 PF02469 Fasciclin domain VIBHAR_06662 PF01734 Patatin-like phospholipase VIBHAR_06663 PF01914 MarC family integral membrane protein VIBHAR_06664 PF00881 Nitroreductase family VIBHAR_06665 PF02563 Polysaccharide biosynthesis/export protein VIBHAR_06665 PF18412 Outer-membrane lipoprotein Wza C-terminal domain VIBHAR_06665 PF10531 SLBB domain VIBHAR_06666 PF01451 Low molecular weight phosphotyrosine protein phosphatase VIBHAR_06667 PF13807 G-rich domain on putative tyrosine kinase VIBHAR_06667 PF13614 AAA domain VIBHAR_06667 PF02706 Chain length determinant protein VIBHAR_06677 PF13358 DDE superfamily endonuclease VIBHAR_06678 PF13737 Transposase DDE domain VIBHAR_06682 PF13419 Haloacid dehalogenase-like hydrolase VIBHAR_06683 PF03466 LysR substrate binding domain VIBHAR_06683 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBHAR_06688 PF14602 Hexapeptide repeat of succinyl-transferase VIBHAR_06688 PF12464 Maltose acetyltransferase VIBHAR_06689 PF02566 OsmC-like protein VIBHAR_06690 PF01625 Peptide methionine sulfoxide reductase VIBHAR_06690 PF01641 SelR domain VIBHAR_06692 PF04244 Deoxyribodipyrimidine photo-lyase-related protein VIBHAR_06693 PF03441 FAD binding domain of DNA photolyase VIBHAR_06693 PF00875 DNA photolyase VIBHAR_06694 PF00990 Diguanylate cyclase, GGDEF domain VIBHAR_06699 PF00990 Diguanylate cyclase, GGDEF domain VIBHAR_06699 PF03707 Bacterial signalling protein N terminal repeat VIBHAR_06699 PF00563 EAL domain VIBHAR_06703 PF00483 Nucleotidyl transferase VIBHAR_06704 PF14706 Transposase DNA-binding VIBHAR_06704 PF02281 Transposase Tn5 dimerisation domain VIBHAR_06704 PF01609 Transposase DDE domain VIBHAR_06709 PF01212 Beta-eliminating lyase VIBHAR_06712 PF03116 NQR2, RnfD, RnfE family VIBHAR_06715 PF01266 FAD dependent oxidoreductase VIBHAR_06721 PF05525 Branched-chain amino acid transport protein VIBHAR_06722 PF00072 Response regulator receiver domain VIBHAR_06722 PF02954 Bacterial regulatory protein, Fis family VIBHAR_06722 PF00158 Sigma-54 interaction domain VIBHAR_06723 PF00072 Response regulator receiver domain VIBHAR_06723 PF00512 His Kinase A (phospho-acceptor) domain VIBHAR_06723 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBHAR_06723 PF13426 PAS domain VIBHAR_06723 PF08448 PAS fold VIBHAR_06724 PF00232 Glycosyl hydrolase family 1 VIBHAR_06732 PF03466 LysR substrate binding domain VIBHAR_06732 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBHAR_06734 PF18030 RimK PreATP-grasp domain VIBHAR_06734 PF08443 RimK-like ATP-grasp domain VIBHAR_06735 PF18030 RimK PreATP-grasp domain VIBHAR_06735 PF08443 RimK-like ATP-grasp domain VIBHAR_06736 PF00753 Metallo-beta-lactamase superfamily VIBHAR_06737 PF17944 Arginine decarboxylase C-terminal helical extension VIBHAR_06737 PF17810 Arginine decarboxylase helical bundle domain VIBHAR_06737 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain VIBHAR_06738 PF00491 Arginase family VIBHAR_06739 PF07690 Major Facilitator Superfamily VIBHAR_06740 PF00326 Prolyl oligopeptidase family VIBHAR_06740 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain VIBHAR_06743 PF00950 ABC 3 transport family VIBHAR_06744 PF00005 ABC transporter VIBHAR_06745 PF01297 Zinc-uptake complex component A periplasmic VIBHAR_06752 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) VIBHAR_06757 PF02472 Biopolymer transport protein ExbD/TolR VIBHAR_06758 PF01618 MotA/TolQ/ExbB proton channel family VIBHAR_06759 PF01618 MotA/TolQ/ExbB proton channel family VIBHAR_06761 PF07715 TonB-dependent Receptor Plug Domain VIBHAR_06761 PF00593 TonB dependent receptor VIBHAR_06762 PF00512 His Kinase A (phospho-acceptor) domain VIBHAR_06762 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBHAR_06762 PF00672 HAMP domain VIBHAR_06762 PF16750 Sensor domain of 2-component histidine kinase VIBHAR_06763 PF00486 Transcriptional regulatory protein, C terminal VIBHAR_06763 PF00072 Response regulator receiver domain VIBHAR_06765 PF03009 Glycerophosphoryl diester phosphodiesterase family VIBHAR_06767 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VIBHAR_06767 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VIBHAR_06768 PF10928 Protein of unknown function (DUF2810) VIBHAR_06773 PF14706 Transposase DNA-binding VIBHAR_06773 PF01609 Transposase DDE domain VIBHAR_06773 PF02281 Transposase Tn5 dimerisation domain VIBHAR_06779 PF01548 Transposase VIBHAR_06779 PF02371 Transposase IS116/IS110/IS902 family VIBHAR_06787 PF13007 Transposase C of IS166 homeodomain VIBHAR_06787 PF13817 IS66 C-terminal element VIBHAR_06787 PF03050 Transposase IS66 family VIBHAR_06787 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_06792 PF03050 Transposase IS66 family VIBHAR_06792 PF13817 IS66 C-terminal element VIBHAR_06792 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_06792 PF13007 Transposase C of IS166 homeodomain VIBHAR_06798 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) VIBHAR_06799 PF02954 Bacterial regulatory protein, Fis family VIBHAR_06801 PF02631 RecX family VIBHAR_06806 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) VIBHAR_06806 PF11867 Domain of unknown function (DUF3387) VIBHAR_06806 PF18766 SWI2/SNF2 ATPase VIBHAR_06810 PF12161 HsdM N-terminal domain VIBHAR_06810 PF02384 N-6 DNA Methylase VIBHAR_06813 PF02899 Phage integrase, N-terminal SAM-like domain VIBHAR_06813 PF00589 Phage integrase family VIBHAR_06818 PF13737 Transposase DDE domain VIBHAR_06819 PF00589 Phage integrase family VIBHAR_06819 PF02899 Phage integrase, N-terminal SAM-like domain VIBHAR_06823 PF03050 Transposase IS66 family VIBHAR_06823 PF13817 IS66 C-terminal element VIBHAR_06823 PF13007 Transposase C of IS166 homeodomain VIBHAR_06823 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_06835 PF04013 Putative SAM-dependent RNA methyltransferase VIBHAR_06836 PF01523 Putative modulator of DNA gyrase VIBHAR_06837 PF01523 Putative modulator of DNA gyrase VIBHAR_06838 PF08543 Phosphomethylpyrimidine kinase VIBHAR_06839 PF00005 ABC transporter VIBHAR_06840 PF00528 Binding-protein-dependent transport system inner membrane component VIBHAR_06841 PF09084 NMT1/THI5 like VIBHAR_06842 PF03070 TENA/THI-4/PQQC family VIBHAR_06843 PF02110 Hydroxyethylthiazole kinase family VIBHAR_06844 PF02581 Thiamine monophosphate synthase VIBHAR_06845 PF01569 PAP2 superfamily VIBHAR_06846 PF00384 Molybdopterin oxidoreductase VIBHAR_06846 PF18364 Molybdopterin oxidoreductase N-terminal domain VIBHAR_06846 PF01568 Molydopterin dinucleotide binding domain VIBHAR_06847 PF03264 NapC/NirT cytochrome c family, N-terminal region VIBHAR_06858 PF00392 Bacterial regulatory proteins, gntR family VIBHAR_06858 PF00155 Aminotransferase class I and II VIBHAR_06862 PF07690 Major Facilitator Superfamily VIBHAR_06863 PF02595 Glycerate kinase family VIBHAR_06864 PF05651 Putative sugar diacid recognition VIBHAR_06864 PF17853 GGDEF-like domain VIBHAR_06864 PF13556 PucR C-terminal helix-turn-helix domain VIBHAR_06869 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) VIBHAR_06875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBHAR_06875 PF03466 LysR substrate binding domain VIBHAR_06876 PF03466 LysR substrate binding domain VIBHAR_06876 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBHAR_06878 PF13007 Transposase C of IS166 homeodomain VIBHAR_06878 PF03050 Transposase IS66 family VIBHAR_06878 PF13817 IS66 C-terminal element VIBHAR_06878 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_06887 PF02027 RolB/RolC glucosidase family VIBHAR_06887 PF01593 Flavin containing amine oxidoreductase VIBHAR_06891 PF03974 Ecotin VIBHAR_06892 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VIBHAR_06895 PF01204 Trehalase VIBHAR_06899 PF13737 Transposase DDE domain VIBHAR_06900 PF12706 Beta-lactamase superfamily domain VIBHAR_06902 PF07690 Major Facilitator Superfamily VIBHAR_06903 PF13533 Biotin-lipoyl like VIBHAR_06904 PF03922 OmpW family VIBHAR_06906 PF13599 Pentapeptide repeats (9 copies) VIBHAR_06909 PF00893 Small Multidrug Resistance protein VIBHAR_06912 PF01037 Lrp/AsnC ligand binding domain VIBHAR_06913 PF01810 LysE type translocator VIBHAR_06914 PF00326 Prolyl oligopeptidase family VIBHAR_06916 PF03466 LysR substrate binding domain VIBHAR_06916 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBHAR_06919 PF13737 Transposase DDE domain VIBHAR_06921 PF03466 LysR substrate binding domain VIBHAR_06921 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBHAR_06924 PF00797 N-acetyltransferase VIBHAR_06925 PF00107 Zinc-binding dehydrogenase VIBHAR_06925 PF08240 Alcohol dehydrogenase GroES-like domain VIBHAR_06926 PF00756 Putative esterase VIBHAR_06928 PF05656 Protein of unknown function (DUF805) VIBHAR_06931 PF17152 Periplasmic sensor domain VIBHAR_06931 PF00990 Diguanylate cyclase, GGDEF domain VIBHAR_06934 PF00849 RNA pseudouridylate synthase VIBHAR_06935 PF01554 MatE VIBHAR_06936 PF00356 Bacterial regulatory proteins, lacI family VIBHAR_06937 PF17912 MalK OB fold domain VIBHAR_06937 PF00005 ABC transporter VIBHAR_06938 PF00232 Glycosyl hydrolase family 1 VIBHAR_06939 PF00528 Binding-protein-dependent transport system inner membrane component VIBHAR_06940 PF00528 Binding-protein-dependent transport system inner membrane component VIBHAR_06943 PF00356 Bacterial regulatory proteins, lacI family VIBHAR_06945 PF02281 Transposase Tn5 dimerisation domain VIBHAR_06945 PF01609 Transposase DDE domain VIBHAR_06945 PF14706 Transposase DNA-binding VIBHAR_06948 PF13358 DDE superfamily endonuclease VIBHAR_06949 PF00563 EAL domain VIBHAR_06949 PF00990 Diguanylate cyclase, GGDEF domain VIBHAR_06951 PF01609 Transposase DDE domain VIBHAR_06951 PF13006 Insertion element 4 transposase N-terminal VIBHAR_06952 PF06865 Pyrimidine/purine nucleoside phosphorylase VIBHAR_06955 PF00704 Glycosyl hydrolases family 18 VIBHAR_06955 PF08329 Chitinase A, N-terminal domain VIBHAR_06960 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VIBHAR_06960 PF02824 TGS domain VIBHAR_06960 PF03129 Anticodon binding domain VIBHAR_06960 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VIBHAR_06962 PF01695 IstB-like ATP binding protein VIBHAR_06964 PF00665 Integrase core domain VIBHAR_06965 PF13007 Transposase C of IS166 homeodomain VIBHAR_06965 PF13817 IS66 C-terminal element VIBHAR_06965 PF03050 Transposase IS66 family VIBHAR_06965 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_06971 PF13358 DDE superfamily endonuclease VIBHAR_06972 PF13007 Transposase C of IS166 homeodomain VIBHAR_06972 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_06972 PF13817 IS66 C-terminal element VIBHAR_06972 PF03050 Transposase IS66 family VIBHAR_06986 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_06986 PF03050 Transposase IS66 family VIBHAR_06986 PF13007 Transposase C of IS166 homeodomain VIBHAR_06986 PF13817 IS66 C-terminal element VIBHAR_06992 PF03600 Citrate transporter VIBHAR_06994 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 VIBHAR_06996 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) VIBHAR_06999 PF03466 LysR substrate binding domain VIBHAR_06999 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBHAR_07002 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase VIBHAR_07004 PF03616 Sodium/glutamate symporter VIBHAR_07005 PF00392 Bacterial regulatory proteins, gntR family VIBHAR_07005 PF00155 Aminotransferase class I and II VIBHAR_07006 PF00005 ABC transporter VIBHAR_07013 PF01593 Flavin containing amine oxidoreductase VIBHAR_07017 PF03616 Sodium/glutamate symporter VIBHAR_07022 PF17200 Single Cache domain 2 VIBHAR_07022 PF00672 HAMP domain VIBHAR_07022 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBHAR_07023 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD VIBHAR_07024 PF00072 Response regulator receiver domain VIBHAR_07024 PF04397 LytTr DNA-binding domain VIBHAR_07025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBHAR_07025 PF06580 Histidine kinase VIBHAR_07025 PF07694 5TMR of 5TMR-LYT VIBHAR_07025 PF13492 GAF domain VIBHAR_07029 PF00005 ABC transporter VIBHAR_07031 PF03466 LysR substrate binding domain VIBHAR_07031 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBHAR_07032 PF13533 Biotin-lipoyl like VIBHAR_07034 PF01098 Cell cycle protein VIBHAR_07036 PF01709 Transcriptional regulator VIBHAR_07038 PF17149 Periplasmic sensor domain found in signal transduction proteins VIBHAR_07038 PF01627 Hpt domain VIBHAR_07038 PF00512 His Kinase A (phospho-acceptor) domain VIBHAR_07038 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBHAR_07038 PF00072 Response regulator receiver domain VIBHAR_07038 PF00672 HAMP domain VIBHAR_07040 PF08719 Domain of unknown function (DUF1768) VIBHAR_07040 PF00925 GTP cyclohydrolase II VIBHAR_07041 PF08719 Domain of unknown function (DUF1768) VIBHAR_07041 PF00925 GTP cyclohydrolase II VIBHAR_07043 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VIBHAR_07043 PF00005 ABC transporter VIBHAR_07049 PF18607 ParA helix turn helix domain VIBHAR_07049 PF13614 AAA domain VIBHAR_07050 PF02195 ParB-like nuclease domain VIBHAR_07050 PF08775 ParB family VIBHAR_07051 PF13006 Insertion element 4 transposase N-terminal VIBHAR_07051 PF01609 Transposase DDE domain VIBHAR_07052 PF05127 Helicase VIBHAR_07052 PF13718 GNAT acetyltransferase 2 VIBHAR_07054 PF00132 Bacterial transferase hexapeptide (six repeats) VIBHAR_07055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBHAR_07055 PF03466 LysR substrate binding domain VIBHAR_07056 PF01418 Helix-turn-helix domain, rpiR family VIBHAR_07056 PF01380 SIS domain VIBHAR_07057 PF00246 Zinc carboxypeptidase VIBHAR_07058 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VIBHAR_07059 PF03358 NADPH-dependent FMN reductase VIBHAR_07062 PF13358 DDE superfamily endonuclease VIBHAR_07089 PF00529 HlyD membrane-fusion protein of T1SS VIBHAR_07090 PF00072 Response regulator receiver domain VIBHAR_07090 PF02954 Bacterial regulatory protein, Fis family VIBHAR_07090 PF00158 Sigma-54 interaction domain VIBHAR_07091 PF02743 Cache domain VIBHAR_07091 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBHAR_07091 PF00512 His Kinase A (phospho-acceptor) domain VIBHAR_07092 PF01243 Pyridoxamine 5'-phosphate oxidase VIBHAR_07092 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region VIBHAR_07095 PF12833 Helix-turn-helix domain VIBHAR_07096 PF18327 Proline utilization A proline dehydrogenase N-terminal domain VIBHAR_07096 PF14850 DNA-binding domain of Proline dehydrogenase VIBHAR_07096 PF01619 Proline dehydrogenase VIBHAR_07096 PF00171 Aldehyde dehydrogenase family VIBHAR_07099 PF00474 Sodium:solute symporter family VIBHAR_07105 PF02371 Transposase IS116/IS110/IS902 family VIBHAR_07105 PF01548 Transposase VIBHAR_07108 PF01037 Lrp/AsnC ligand binding domain VIBHAR_07111 PF00005 ABC transporter VIBHAR_07111 PF00664 ABC transporter transmembrane region VIBHAR_07115 PF01476 LysM domain VIBHAR_07115 PF07979 Intimin C-type lectin domain VIBHAR_07115 PF11924 Inverse autotransporter, beta-domain VIBHAR_07115 PF02368 Bacterial Ig-like domain (group 2) VIBHAR_07115 PF02369 Bacterial Ig-like domain (group 1) VIBHAR_07121 PF00933 Glycosyl hydrolase family 3 N terminal domain VIBHAR_07122 PF13358 DDE superfamily endonuclease VIBHAR_07125 PF13737 Transposase DDE domain VIBHAR_p08165 PF04002 RadC-like JAB domain VIBHAR_p08174 PF18821 Large polyvalent protein-associated domain 7 VIBHAR_p08174 PF03432 Relaxase/Mobilisation nuclease domain VIBHAR_p08178 PF03050 Transposase IS66 family VIBHAR_p08178 PF13817 IS66 C-terminal element VIBHAR_p08178 PF13007 Transposase C of IS166 homeodomain VIBHAR_p08178 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_p08181 PF13333 Integrase core domain VIBHAR_p08181 PF00665 Integrase core domain VIBHAR_p08181 PF13276 HTH-like domain VIBHAR_p08185 PF00665 Integrase core domain VIBHAR_p08185 PF13276 HTH-like domain VIBHAR_p08185 PF13333 Integrase core domain VIBHAR_p08189 PF02371 Transposase IS116/IS110/IS902 family VIBHAR_p08189 PF01548 Transposase VIBHAR_p08193 PF02371 Transposase IS116/IS110/IS902 family VIBHAR_p08193 PF01548 Transposase VIBHAR_p08201 PF01751 Toprim domain VIBHAR_p08201 PF01131 DNA topoisomerase VIBHAR_p08203 PF02534 Type IV secretory system Conjugative DNA transfer VIBHAR_p08204 PF00437 Type II/IV secretion system protein VIBHAR_p08206 PF03743 Bacterial conjugation TrbI-like protein VIBHAR_p08207 PF03524 Conjugal transfer protein VIBHAR_p08208 PF04335 VirB8 protein VIBHAR_p08213 PF03135 CagE, TrbE, VirB family, component of type IV transporter system VIBHAR_p08227 PF13614 AAA domain VIBHAR_p08236 PF13005 zinc-finger binding domain of transposase IS66 VIBHAR_p08236 PF13007 Transposase C of IS166 homeodomain VIBHAR_p08236 PF13817 IS66 C-terminal element VIBHAR_p08236 PF03050 Transposase IS66 family VIBHAR_p08245 PF02796 Helix-turn-helix domain of resolvase VIBHAR_p08245 PF00239 Resolvase, N terminal domain VIBHAR_p08249 PF00239 Resolvase, N terminal domain VIBHAR_p08249 PF02796 Helix-turn-helix domain of resolvase VIBHAR_p08258 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) VIBHAR_p08266 PF02195 ParB-like nuclease domain VIBHAR_p08266 PF08775 ParB family VIBHAR_p08267 PF13614 AAA domain VIBHAR_p08269 PF11798 IMS family HHH motif VIBHAR_p08269 PF00817 impB/mucB/samB family VIBHAR_p08269 PF11799 impB/mucB/samB family C-terminal domain VIBHAR_p08269 PF13438 Domain of unknown function (DUF4113) VIBHAR_p08270 PF00717 Peptidase S24-like VIBHAR_p08274 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) VIBHAR_p08277 PF13358 DDE superfamily endonuclease